isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
transcript_1.known	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8589	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00002_+_0_1000
transcript_10.known	ERCC-00034	+	1003	1	FSM	ERCC-00034A	DQ855001	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00034_+_0_1000
transcript_100.known	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_6057
transcript_100001.known	chr19	+	1481	10	FSM	ENSG00000105197.11	ENST00000601358.5	1481	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	364.333316390498	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCCCGAGAGTCTCCA	6995	False	NA	28	True	AATAAA	-24	NA	39480483	39489928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_100011.known	chr19	+	2004	9	FSM	ENSG00000090932.11	ENST00000356433.10	2004	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	25.406692031825	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGACTAACGAGGCTGA	-3	True	NA	18	True	TATAAA	-18	NA	39498946	39508469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829_39507915_39508251
transcript_100013.known	chr19	+	1375	6	FSM	ENSG00000090932.11	ENST00000600437.1	1375	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.61162005664439	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTATTCTAGGCACTGA	NA	False	NA	NA	False	NA	NA	NA	39498894	39505653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228
transcript_100018.known	chr19	+	1704	6	FSM	ENSG00000186838.14	ENST00000335426.8	1704	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.63560112144215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTGGTCCCAGCTAT	1445	False	NA	20	True	AATAAA	-24	NA	39515112	39520686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39516022_39518607_39518633_39518739_39518794_39518902_39518978_39519070_39519171_39520145
transcript_100030.known	chr19	+	481	4	FSM	ENSG00000186838.14	ENST00000600586.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	14.3836326735943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGTCCAGTCTGACT	391	False	NA	2	True	AATACA	-14	NA	39515813	39520264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39516022_39518739_39518794_39519070_39519171_39520145
transcript_100032.nnic	chr19	+	1451	3	NIC	ENSG00000186838.14	novel	481	4	NA	NA	33	-20	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	17	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGGTGGTGT	7	True	NA	0	True	AATAAA	-4	NA	39515145	39520666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39516022_39518739_39518794_39520145
transcript_100033.known	chr19	+	645	2	FSM	ENSG00000186838.14	ENST00000597876.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGGGAGAGGGGGGTG	23	False	NA	NA	False	NA	NA	NA	39515445	39518808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39516022_39518739
transcript_100035.known	chr19	-	1866	1	FSM	ENSG00000176401.6	ENST00000326282.5	1866	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCATTTTCCCTTTT	7375	False	39532868	-4	True	AATAAA	-13	NA	39532852	39530986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39531000_39532900
transcript_100036.known	chr19	-	281	2	FSM	ENSG00000176401.6	ENST00000601837.1	281	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTGGTGGCACGCGC	-10	True	NA	NA	False	AATAAA	-8	NA	39532843	39531336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39531514_39532739
transcript_100037.known	chr19	-	1455	1	FSM	ENSG00000176396.11	ENST00000390658.4	1455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATTCTTGTTTTCC	-5	True	NA	-7	True	TATAAA	-15	NA	39540161	39538706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39538700_39540200
transcript_100039.known	chr19	-	631	4	FSM	ENSG00000105205.7	ENST00000221804.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTGGTTCTTGCTTT	-4	True	NA	-3	True	ATTAAA	-17	NA	39738029	39731254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39731506_39734282_39734494_39734996_39735074_39737937
transcript_100045.known	chr19	-	2448	12	FSM	ENSG00000105204.14	ENST00000348817.7	2448	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	33.1343371371854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGCCTGAGCGTTT	6545	False	NA	-7	True	AGTAAA	-11	NA	39834201	39825352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826868_39826951_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
transcript_100046.nic	chr19	-	2618	11	NIC	ENSG00000105204.14	novel	2724	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_10	39.2383740743676	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	-13	True	NA	-4	True	AGTAAA	-14	NA	39833648	39825349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_39826087_39826179_39826287_39826671_39826868_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39833266
transcript_100047.known	chr19	-	2007	11	FSM	ENSG00000105204.14	ENST00000430012.6	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	28.2460616723819	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCCCCTCCCTGGGGC	-7	True	NA	NA	False	NA	NA	NA	39834158	39825714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826868_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
transcript_100048.known	chr19	-	2724	11	FSM	ENSG00000105204.14	ENST00000593685.5	2724	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	32.4759911319116	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	1	True	NA	-4	True	AGTAAA	-14	NA	39833634	39825349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39833266
transcript_100049.known	chr19	-	2496	11	FSM	ENSG00000105204.14	ENST00000323039.10	2496	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	14.9799866488592	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	-11	True	NA	-4	True	AGTAAA	-14	NA	39834162	39825349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
transcript_10005.known	chr1	-	4225	10	FSM	ENSG00000116133.13	ENST00000535035.6	4225	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1075.34574399855	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGGAAGCTGGCGTTT	15	True	NA	15	True	AATAAA	-3	NA	54887167	54849642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54855988_54856025_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_10006.known	chr1	-	3575	10	FSM	ENSG00000116133.13	ENST00000648728.1	3575	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	1069.28346840418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGCTCAGTGCAAAAC	-13	True	NA	NA	False	NA	NA	NA	54887195	54850341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54879748_54879806_54883617_54883774_54886888
transcript_100061.known	chr19	-	1125	9	FSM	ENSG00000105202.9	ENST00000221801.8	1125	9	0	0	0	0	multi-exon	FALSE	canonical	3	1948	junction_7	265.37049572249	1073	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-19	True	NA	-7	True	ATTAAA	-14	NA	39846379	39834457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
transcript_100078.known	chr19	+	1754	11	FSM	ENSG00000013275.8	ENST00000157812.7	1754	11	0	0	0	0	multi-exon	TRUE	canonical	3	777	junction_6	111.310556552377	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGATGGATATGTTC	-16	True	NA	NA	False	NA	NA	NA	39971164	39981764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_100080.known	chr19	+	1333	11	FSM	ENSG00000013275.8	ENST00000455878.2	1333	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	307.832178304998	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	-11	True	NA	54	True	AATAAA	-19	NA	39971169	39981441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39971239_39972145_39972245_39972461_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_100082.known	chr19	+	1532	10	FSM	ENSG00000013275.8	ENST00000593455.5	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_6	116.743255284068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTCTTCAATAAATAGAT	-11	True	NA	21	True	NA	NA	NA	39971169	39981408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980455_39980661_39980718_39981191
transcript_100088.known	chr19	-	3472	6	FSM	ENSG00000197782.15	ENST00000595687.6	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	27.1587923148287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGCACGTTTATTT	12	True	NA	72	True	AATATA	-35	NA	40090888	40073179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090793
transcript_100089.known	chr19	-	467	6	FSM	ENSG00000197782.15	ENST00000601688.5	467	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	24.2454119371068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACAACTCTTGGCATT	-4	True	NA	-16	True	AGTAAA	-27	NA	40090938	40076122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_100091.known	chr19	-	3600	6	FSM	ENSG00000197782.15	ENST00000455521.5	3600	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	29.4305963242337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATTTTCAGATTTCTT	-4	True	NA	NA	False	NA	NA	NA	40090938	40072992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_100092.known	chr19	-	665	5	FSM	ENSG00000197782.15	ENST00000599368.5	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	11.8638105177047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	477	False	NA	-7	True	AGTAAA	-36	NA	40090457	40076113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165
transcript_100093.known	chr19	-	401	5	FSM	ENSG00000128000.17	ENST00000598845.5	401	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	16.4981059518964	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCCTCGAGGCCTTT	44	False	NA	NA	False	AATAAA	-36	NA	40056156	40036530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40036627_40047405_40047474_40048669_40048797_40050323_40050378_40056100
transcript_100094.known	chr19	+	3754	10	FSM	ENSG00000130758.8	ENST00000253055.8	3754	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	14.353560232849	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCACTTGATTGTGTTCCT	0	True	NA	7	True	ATTAAA	-19	NA	40191425	40215575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40192714_40198374_40198556_40204484_40204634_40205120_40205297_40205910_40206158_40209102_40209220_40212804_40212977_40213075_40213189_40213516_40214222_40214969
transcript_100095.known	chr19	-	843	3	FSM	ENSG00000174521.8	ENST00000311308.7	828	3	-15	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGGTGTTCTTGGGG	-30	True	NA	2	True	AAAACA	-21	NA	40218399	40216057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40216273_40217186_40217370_40217954
transcript_100096.known	chr19	-	1145	6	FSM	ENSG00000105219.10	ENST00000599263.6	1145	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.62480768092719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTCTGCCCTCATTGG	7119	False	NA	-1	True	AATAAA	-20	NA	40226697	40222207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40222473_40223151_40223304_40223387_40223547_40224487_40224644_40224721_40224812_40226374
transcript_100097.known	chr19	-	1816	5	FSM	ENSG00000105219.10	ENST00000430325.7	1816	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.78535710713571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTCTGCCCTCATTGG	0	True	NA	-1	True	AATAAA	-20	NA	40226689	40222207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40223304_40223387_40223547_40224487_40224644_40224721_40224812_40226374
transcript_1001.known	chr1	-	2428	2	FSM	ENSG00000127054.22	ENST00000496353.1	2428	2	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTATCTTTTTTG	46	False	NA	-32	True	NA	NA	NA	1324611	1318696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1321094_1324580
transcript_100101.known	chr19	-	1783	4	FSM	ENSG00000105219.10	ENST00000221818.5	1783	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGAGCGCTCTCTGCCC	7159	False	NA	-8	True	AATAAA	-13	NA	40226657	40222214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40223304_40223387_40223643_40224487_40224644_40226374
transcript_100115.known	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_13	15.4862030597271	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-12	True	NA	-5	True	AATAAA	-18	NA	40285345	40230316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
transcript_100116.nnic	chr19	-	3167	14	NNC	ENSG00000105221.18	novel	5250	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	30.3901650238612	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCCCAGCCTGCACT	49	False	NA	-35	True	AATAAA	-15	NA	40285381	40232334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40257026_40257055_40265221_40265352_40285180
transcript_100119.known	chr19	-	1795	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	25.7158619446356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTCGCATTTGGAAG	57	False	NA	NA	False	NA	NA	NA	40285373	40233669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
transcript_100122.nnic	chr19	-	2994	12	NNC	ENSG00000105221.18	novel	1795	13	NA	NA	-479	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	33.0521751325346	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCCCAGCCTGCACT	9600	False	NA	-35	True	AATAAA	-15	NA	40255656	40232334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40255470
transcript_100137.known	chr19	+	1906	13	FSM	ENSG00000105223.20	ENST00000356508.9	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	692.266206021932	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	14	True	NA	14	True	AGTAAA	-14	NA	40348699	40378483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348725_40365552_40365586_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_100148.nic	chr19	+	2464	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	24	0	intron_retention	TRUE	canonical	3	465	junction_1	412.793128172777	4202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	NA	False	NA	14	True	AGTAAA	-14	NA	40348530	40378483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40348769_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_100154.known	chr19	+	2180	13	FSM	ENSG00000105223.20	ENST00000409587.5	2180	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	675.155640492538	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	-1	True	NA	14	True	AGTAAA	-14	NA	40348684	40378483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348769_40365717_40365931_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_100155.known	chr19	+	2137	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	491.042845777116	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCCTGACTGAGTGG	9	True	NA	16	True	AGTAAA	-16	NA	40348694	40378485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_100173.known	chr19	+	1966	12	FSM	ENSG00000105223.20	ENST00000409419.5	1966	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	560.035108108456	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	-8	True	NA	6	True	AGTAAA	-6	NA	40348677	40378475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348769_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_1002.known	chr1	-	2725	14	FSM	ENSG00000131584.19	ENST00000467278.5	2725	14	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	15.8083941450037	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTCATGTTCTTT	9080	False	NA	-6	True	CATAAA	-20	NA	1298955	1292869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1294717_1294817_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566
transcript_100200.known	chr19	-	2126	9	FSM	ENSG00000160392.14	ENST00000392035.6	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	32.3950227658509	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCCACTCCTTCA	3	True	NA	-16	True	AATATA	-18	NA	40348386	40321062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341785_40341891_40348323
transcript_100202.known	chr19	-	3611	9	FSM	ENSG00000160392.14	ENST00000683109.1	3611	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	14.7938965455353	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	-8	True	NA	NA	False	NA	NA	NA	40348397	40319535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
transcript_100203.known	chr19	-	3628	9	FSM	ENSG00000160392.14	ENST00000582783.5	3628	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	36.1954330682753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	1	True	NA	NA	False	NA	NA	NA	40348527	40319535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348436
transcript_100216.known	chr19	+	4765	1	FSM	ENSG00000279759.1	ENST00000622968.1	4765	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTCATTCTCTCAGTT	202	False	NA	NA	False	AAAAAG	-4	NA	40355841	40360606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40355800_40360600
transcript_100217.known	chr19	-	4867	7	FSM	ENSG00000105227.16	ENST00000324001.8	4867	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	12.8290035986172	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTATTTGTCTCCTCT	1	True	NA	-7	True	AATAAA	-15	NA	40413378	40393767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40397971_40398619_40398817_40403705_40403863_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_100218.nic	chr19	-	779	5	NIC	ENSG00000105227.16	novel	475	3	NA	NA	-15	20	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	7.39932429347437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTGTCTAAACACACAC	8448	False	NA	NA	False	AATAAA	-28	NA	40413393	40407265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_40407720_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_100219.known	chr19	-	4433	2	FSM	ENSG00000105227.16	ENST00000674773.1	4433	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTATTTGTCTCCTCT	9444	False	NA	-7	True	AATAAA	-15	NA	40403935	40393767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40397971_40403705
transcript_100220.known	chr19	-	4985	3	FSM	ENSG00000105227.16	ENST00000673881.1	4985	3	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATTTGTCTCCTCTGT	2	True	NA	-5	True	AATAAA	-17	NA	40404288	40393765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40397971_40398619_40398817_40403705
transcript_100221.known	chr19	-	2084	2	FSM	ENSG00000197019.5	ENST00000357949.5	2084	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGGCAAAGGATAGGG	0	True	NA	NA	False	AATAAA	-20	NA	40425992	40421588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40423547_40425866
transcript_100228.known	chr19	-	1364	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	-24	True	NA	-1	True	AATAAA	-17	NA	40444335	40440843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40442087_40444214
transcript_100229.known	chr19	-	747	2	FSM	ENSG00000167565.13	ENST00000599706.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTTGGGAGTGGAATG	249	False	NA	NA	False	NA	NA	NA	40444062	40441547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40442087_40443854
transcript_10023.known	chr1	-	4233	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	0	0	0	multi-exon	FALSE	canonical	3	2242	junction_1	204.988261859064	5494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCGTTTCTTGCTTGG	-13	True	NA	-1	True	AATAAA	-19	NA	54887195	54849626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_100231.known	chr19	-	767	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	221.456965345414	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACCGACTGTGTGACT	453	False	NA	-11	True	AATAAA	-30	NA	40465759	40447794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
transcript_100232.known	chr19	-	938	4	FSM	ENSG00000090013.11	ENST00000643519.1	938	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	216.447581542404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTGAGTATTT	23	True	NA	19	True	NA	NA	NA	40465764	40447764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40448047_40451363_40451493_40458173_40458546_40465609
transcript_100236.nnic	chr19	+	1969	5	NIC	ENSG00000160460.17	novel	8676	36	NA	NA	-3384	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	8.347903928532	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTCCTTTGTTTGGGTT	NA	False	NA	11	True	AATAAA	-20	NA	40567654	40576464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40568283_40569656_40569727_40572018_40572193_40572337_40572381_40575410
transcript_100238.known	chr19	+	525	4	FSM	ENSG00000160460.17	ENST00000599926.5	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.32049379893857	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAACACTGAGGACGC	NA	False	NA	NA	False	NA	NA	NA	40571038	40575663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40571094_40572018_40572193_40572337_40572381_40575410
transcript_100248.known	chr19	+	2341	18	FSM	ENSG00000160410.15	ENST00000291842.10	2341	18	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_11	41.2480050896456	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	0	True	NA	20	True	AATAAA	-15	NA	40576872	40591397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_100274.known	chr19	+	1993	16	FSM	ENSG00000160410.15	ENST00000600718.5	1993	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	154.765715410961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCCCCAATAAAGTCCT	16	False	NA	-9	True	NA	NA	NA	40576915	40591368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40590729_40590854_40590975
transcript_100285.nnic	chr19	+	2057	15	NIC	ENSG00000160410.15	novel	2284	18	NA	NA	-17	0	combination_of_known_splicesites	TRUE	canonical	3	21	junction_9	154.764534776188	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	NA	False	NA	20	True	AATAAA	-15	NA	40576835	40591397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_1003.nnic	chr1	+	2007	4	NNC	ENSG00000224051.7	novel	2154	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.5212018570267	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGCCTGATTTCCTGC	5323	False	NA	45	True	AATAAA	-37	NA	1324768	1328896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_1325103_1326835_1327033_1327240_1328457_1328636
transcript_100302.known	chr19	+	2339	16	FSM	ENSG00000160410.15	ENST00000594973.5	2339	16	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_9	40.9029202978087	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGCTTATTCTTAG	49	False	NA	18	True	AATAAA	-13	NA	40577228	40591395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_100303.known	chr19	+	5032	33	FSM	ENSG00000090006.18	ENST00000204005.13	5032	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.9321888336724	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCCTCCTCCTGTCT	736	False	NA	23	True	ATTAAA	-17	NA	40593165	40629818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40593182_40599196_40599256_40599401_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_100304.known	chr19	+	4948	33	FSM	ENSG00000090006.18	ENST00000308370.11	4948	33	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	88.5945767157195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTATGTGCACGGGGCCG	37	True	NA	NA	False	NA	NA	NA	40597234	40629623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40597381_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_100317.known	chr19	+	4961	30	FSM	ENSG00000090006.18	ENST00000396819.8	4961	30	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	90.9700529574282	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCCTCCTCCTGTCT	2	True	NA	23	True	ATTAAA	-17	NA	40601368	40629818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40601638_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_100327.nic	chr19	+	2596	14	ISM	ENSG00000090006.18	ENST00000243562.13	3140	19	3572	0	-55	0	3prime_fragment	FALSE	canonical	3	77	junction_4	83.1961395326496	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	1441	False	NA	22	True	ATTAAA	-16	NA	40613317	40629817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_100339.nic	chr19	+	1846	12	ISM	ENSG00000090006.18	ENST00000308370.11	4948	33	-61	20862	-61	-160	5prime_fragment	FALSE	canonical	3	44	junction_2	12.7337645781041	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGGCGTGGTGGCAG	-24	True	NA	NA	False	ACTAAA	-11	NA	40597173	40608761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_40597381_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483
transcript_100340.nic	chr19	+	2077	12	ISM	ENSG00000090006.18	ENST00000308370.11	4948	33	-132	20702	-132	0	5prime_fragment	FALSE	canonical	3	44	junction_2	12.7337645781041	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	2623	False	NA	NA	False	NA	NA	NA	40597102	40608921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_40597381_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483
transcript_100342.nic	chr19	+	1950	12	NIC	ENSG00000090006.18	novel	657	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	22.6755775710745	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	-3	True	NA	NA	False	NA	NA	NA	40598471	40608921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40598623_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483
transcript_100347.nic	chr19	+	2338	12	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_3	73.9598953197101	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	1441	False	NA	22	True	ATTAAA	-16	NA	40613317	40629817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40613530_40613915_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_100377.known	chr19	+	2446	11	FSM	ENSG00000090006.18	ENST00000595118.5	2446	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	70.9625957811578	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	167	False	NA	22	True	ATTAAA	-16	NA	40613595	40629817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_100379.known	chr19	-	3561	10	FSM	ENSG00000105245.9	ENST00000252891.8	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	13.5710294195456	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGGTTGATTTTGTGC	-5	True	NA	-2	True	TATAAA	-27	NA	40690651	40665904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40668139_40669897_40670021_40673343_40673650_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40682969_40684416_40684557_40686910_40686996_40690459
transcript_100388.known	chr19	-	2297	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_15	58.8304531872926	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	4	True	NA	11	True	AATAAA	-33	NA	40716882	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
transcript_100392.known	chr19	-	2237	15	FSM	ENSG00000123815.13	ENST00000678419.1	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	53.2050327525891	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1896	False	NA	11	True	AATAAA	-33	NA	40714990	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_100393.nic	chr19	-	2230	15	NIC	ENSG00000123815.13	novel	2443	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	57.6153678478659	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-31	True	NA	-5	True	AATAAA	-17	NA	40715119	40691529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715032
transcript_100394.known	chr19	-	2305	15	FSM	ENSG00000123815.13	ENST00000679130.1	2305	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	56.8778228723101	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1034	False	NA	11	True	AATAAA	-33	NA	40715852	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715706
transcript_100395.known	chr19	-	2443	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_14	41.9190789936214	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	0	True	NA	-5	True	AATAAA	-17	NA	40716886	40691529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_100396.known	chr19	-	2194	15	FSM	ENSG00000123815.13	ENST00000594720.6	2194	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	47.631932780522	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-10	True	NA	11	True	AATAAA	-33	NA	40716896	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_100398.known	chr19	-	2270	15	FSM	ENSG00000123815.13	ENST00000678316.1	2270	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.4838227024123	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	164	False	NA	11	True	AATAAA	-33	NA	40716722	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705349_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_100419.known	chr19	-	2350	14	FSM	ENSG00000123815.13	ENST00000678119.1	2350	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	54.9211376516068	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1926	False	NA	11	True	AATAAA	-33	NA	40714960	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_100421.known	chr19	-	2448	14	FSM	ENSG00000123815.13	ENST00000596455.6	2448	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	58.7805063689833	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1034	False	NA	11	True	AATAAA	-33	NA	40715852	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715706
transcript_100422.known	chr19	-	2512	14	FSM	ENSG00000123815.13	ENST00000678433.1	2512	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	68.3558388878315	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	86	False	NA	11	True	AATAAA	-33	NA	40716800	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700448_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_100423.known	chr19	-	2335	14	FSM	ENSG00000123815.13	ENST00000679002.1	2335	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	49.0462889680602	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-8	True	NA	11	True	AATAAA	-33	NA	40716894	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_100426.known	chr19	-	2299	14	FSM	ENSG00000123815.13	ENST00000678166.1	2299	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	79.489346537871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	4	True	NA	11	True	AATAAA	-33	NA	40716882	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
transcript_100428.known	chr19	-	2042	13	FSM	ENSG00000123815.13	ENST00000677517.1	2042	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	79.9376058769171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-23	True	NA	11	True	AATAAA	-33	NA	40715111	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714277_40714398_40715056
transcript_100466.known	chr19	+	3376	7	FSM	ENSG00000086544.3	ENST00000263370.3	3376	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	9.8784276751583	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTAGAGCTTTTTATTT	-11	True	NA	17	True	AATAAA	-19	NA	40717111	40740860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40718291_40725339_40725440_40729201_40729416_40733159_40733365_40736985_40737088_40737697_40737770_40739356
transcript_100471.nic	chr19	+	1232	7	NIC	ENSG00000077312.9	novel	1277	6	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	597.874963702464	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	-8	True	NA	37	True	ATTAAA	-30	NA	40750838	40765389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40750978_40751386_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_100481.known	chr19	+	969	6	FSM	ENSG00000077312.9	ENST00000601393.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	647.451496252808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCCAAGAAGTAGCAC	9	True	NA	NA	False	NA	NA	NA	40751208	40765150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40751482_40757331_40757442_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_100483.known	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_5	50.9768574943572	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	3	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_100489.known	chr19	-	3302	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	15.1340675299141	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-9	True	NA	-9	True	AATAAA	-14	NA	40750477	40740860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
transcript_100490.known	chr19	-	2521	6	FSM	ENSG00000188493.15	ENST00000470681.5	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	25.4605577315188	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	-24	True	NA	-4	True	AATAAA	-19	NA	40750492	40740855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_1005.known	chr1	+	2154	3	FSM	ENSG00000224051.7	ENST00000343938.9	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	3.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGCCTGATTTCCTGC	-24	True	NA	45	True	AATAAA	-37	NA	1324801	1328896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1325103_1326835_1327033_1327240
transcript_10050.known	chr1	+	1256	3	FSM	ENSG00000143001.5	ENST00000371268.4	1256	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGACTCTATGAGTTG	-1	True	NA	5	True	AATAAA	-16	NA	54980627	54992288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54981081_54986096_54986447_54991835
transcript_100501.known	chr19	-	2201	15	FSM	ENSG00000123815.13	ENST00000601967.6	2201	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	53.6931949475301	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-10	True	NA	11	True	AATAAA	-33	NA	40715098	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
transcript_100502.known	chr19	-	2041	14	FSM	ENSG00000123815.13	ENST00000243583.10	2041	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	79.3898328637249	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	15	True	NA	-5	True	AATAAA	-17	NA	40715073	40691529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715052
transcript_100503.known	chr19	-	2281	13	FSM	ENSG00000123815.13	ENST00000676960.1	2281	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	60.8111831820431	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1890	False	NA	11	True	AATAAA	-33	NA	40714996	40691513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714912
transcript_100504.known	chr19	+	2774	12	FSM	ENSG00000171570.11	ENST00000594136.2	2774	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	401.016683150825	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGAGCTGCACACATC	2	True	NA	4	True	AATAAA	-6	NA	40778270	40808418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_100505.known	chr19	+	1159	8	FSM	ENSG00000167578.18	ENST00000357052.8	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	18.8127182338688	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCCTCCATTATTG	-22	True	NA	10	True	CATAAA	-17	NA	40778246	40796942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_100535.known	chr19	+	2100	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_1	75.5989417915357	5791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	-18	True	NA	20	True	AATAAA	-22	NA	40799190	40808434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_100542.known	chr19	+	2150	6	FSM	ENSG00000269858.6	ENST00000406058.6	2150	6	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	418.590778684863	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	-8	True	NA	18	True	AATAAA	-20	NA	40799514	40808432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40799639_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_100543.nic	chr19	+	2281	6	NIC	ENSG00000269858.6	novel	2150	6	NA	NA	27	0	intron_retention	FALSE	canonical	3	28	junction_1	410.608134356834	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	69	False	NA	18	True	AATAAA	-20	NA	40799451	40808432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40799707_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_10056.known	chr1	+	3637	12	FSM	ENSG00000169174.11	ENST00000302118.5	3637	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	19.2684386308992	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATAGACTTGACTG	5	True	NA	19	True	AATAAA	-22	NA	55039547	55064852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_55040045_55043842_55044035_55046522_55046647_55052277_55052412_55052649_55052792_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
transcript_100566.known	chr19	-	2535	2	FSM	ENSG00000233622.3	ENST00000641596.1	2535	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTCAATAAAGGCCCTAAA	1011	False	NA	-34	True	NA	NA	NA	40811097	40808473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40810496_40810584
transcript_100568.known	chr19	+	3071	9	FSM	ENSG00000197408.10	ENST00000324071.10	3071	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.478240283249	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATCTGTGCCATTTT	-3	True	NA	18	True	AATAAA	-31	NA	40991281	41018398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40991477_41004000_41004164_41004296_41004447_41006904_41007066_41009218_41009396_41009993_41010136_41012297_41012486_41012673_41012816_41016645
transcript_100571.nic	chr19	+	1765	7	ISM	ENSG00000197838.5	ENST00000330436.4	1760	9	1227	0	1227	0	3prime_fragment	TRUE	canonical	1	1	junction_6	1.34370962471642	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTACCTCCGTGTCAGCT	1226	False	NA	NA	False	NA	NA	NA	41089677	41096195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_41090197_41090403_41090565_41091731_41091909_41093629_41093772_41094244_41094433_41094958_41095101_41095759
transcript_100597.known	chr19	+	2612	9	FSM	ENSG00000167600.14	ENST00000310054.9	2612	9	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_5	107.452024178235	2667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	7	True	NA	24	True	ATTAAA	-24	NA	41193218	41207539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_100600.known	chr19	+	4717	20	FSM	ENSG00000167601.12	ENST00000301178.9	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_9	22.662891435107	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	15	True	NA	17	True	CATAAA	-18	NA	41219222	41261766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_100606.known	chr19	+	3206	19	FSM	ENSG00000167601.12	ENST00000359092.7	3206	19	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	13.1656117720877	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTTTTTTTTTTTTT	27	False	NA	19	True	ATTAAA	-19	NA	41219234	41260294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_100618.known	chr19	+	1708	12	FSM	ENSG00000167601.12	ENST00000599659.5	1708	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	26.6947854504945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCACAAAGAACTTTCAAG	-5	True	NA	NA	False	NA	NA	NA	41219378	41243864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615
transcript_100624.nic	chr19	+	2318	3	ISM	ENSG00000167601.12	ENST00000599659.5	1708	12	-212	20935	-56	933	intron_retention	FALSE	canonical	3	111	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGAGACAGAGAGAGATA	205	False	NA	NA	False	AAAAAG	-4	NA	41219166	41222929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_41219478_41220635_41220859_41221145
transcript_100626.nic	chr19	+	2820	2	ISM	ENSG00000167601.12	ENST00000599659.5	1708	12	-427	20935	-271	933	intron_retention	TRUE	canonical	3	111	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGAGACAGAGAGAGATA	-10	True	NA	NA	False	AAAAAG	-4	NA	41218951	41222929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_41219478_41220635
transcript_100628.known	chr19	+	3426	15	FSM	ENSG00000105323.18	ENST00000352456.7	3426	15	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_13	302.034462150481	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	237	False	NA	19	True	NA	NA	NA	41262495	41307598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
transcript_100631.known	chr19	+	2794	15	FSM	ENSG00000105323.18	ENST00000595018.5	2794	15	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	228.689969261479	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	-1	True	NA	20	True	NA	NA	NA	41262518	41307019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_100637.known	chr19	+	3925	15	FSM	ENSG00000105323.18	ENST00000392006.8	3925	15	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	188.489010668678	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	-3	True	NA	13	True	ATTAAA	-17	NA	41264371	41307787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_100643.known	chr19	+	3043	15	FSM	ENSG00000105323.18	ENST00000595196.5	3043	15	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	288.634399070053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	-3	True	NA	51	True	ATTAAA	-29	NA	41264410	41307050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_100652.known	chr19	+	2952	15	FSM	ENSG00000105323.18	ENST00000263367.7	2952	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	298.436333072833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	35	False	NA	20	True	NA	NA	NA	41265121	41307019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41265344_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_100655.known	chr19	+	2725	15	FSM	ENSG00000105323.18	ENST00000593587.5	2725	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	313.028035518239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACCCTGCTCCAGCCCC	-8	True	NA	-74	True	NA	NA	NA	41265078	41306925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41265168_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_100672.known	chr19	+	1960	10	FSM	ENSG00000255730.5	ENST00000540732.3	1960	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	204.420650789336	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTCTGGTCTTTGTTT	18	True	NA	39	True	AATAAA	-25	NA	41376756	41425001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_100682.known	chr19	+	1742	9	FSM	ENSG00000248098.12	ENST00000269980.7	1742	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_8	27.2921119556549	1682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	2	True	NA	40	True	AATAAA	-26	NA	41397817	41425002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_10069.known	chr1	+	573	4	FSM	ENSG00000223956.4	ENST00000451914.2	573	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTAGGTTCGCTAT	-6	True	NA	8	True	AATAAA	-22	NA	56414934	56415966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_56415151_56415247_56415343_56415532_56415610_56415781
transcript_100696.known	chr19	-	2780	7	FSM	ENSG00000105329.11	ENST00000221930.6	2780	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	16.1081414887697	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTGACTGTGCCACT	-2	True	NA	NA	False	NA	NA	NA	41353922	41330322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41331211_41332127_41332282_41341882_41342031_41342169_41342248_41344746_41344865_41348294_41348456_41352689
transcript_10070.known	chr1	+	633	4	FSM	ENSG00000223956.4	ENST00000662108.1	633	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTAGGTTCGCTAT	20	False	NA	8	True	AATAAA	-22	NA	56414960	56415966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_56415151_56415247_56415343_56415532_56415696_56415781
transcript_100701.known	chr19	-	998	6	FSM	ENSG00000077348.10	ENST00000221233.9	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_4	23.3786227139239	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCTGTTGAGCACCC	4	True	NA	-16	True	AATAAA	-15	NA	41397359	41386373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41392866_41392981_41397180
transcript_100706.known	chr19	+	3329	5	FSM	ENSG00000142039.4	ENST00000269967.4	3329	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	20.1308221391974	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTATACGTAAATTTG	-39	True	NA	13	True	ATTAAA	-16	NA	41310171	41324873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41310357_41316383_41316840_41319573_41319853_41320340_41320471_41322594
transcript_100709.known	chr19	-	1084	5	FSM	ENSG00000105329.11	ENST00000677934.1	1084	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	92.5108101791353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGATCTCTGTGTCAT	7	True	NA	-8	True	ATTAAA	-13	NA	41353044	41330914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41331211_41332127_41332282_41344746_41344865_41348294_41348456_41352689
transcript_100710.known	chr19	-	848	5	FSM	ENSG00000123810.9	ENST00000594416.1	848	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.5214154679352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGTCACCACCATCCACA	NA	False	NA	NA	False	NA	NA	NA	41364165	41354686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41355014_41357896_41358023_41362982_41363078_41363431_41363524_41363957
transcript_100711.known	chr19	-	826	5	FSM	ENSG00000077348.10	ENST00000596905.1	826	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	215.72436116489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATGGAATGGATGAAT	21	True	NA	-57	True	NA	NA	NA	41397342	41386414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41397180
transcript_100715.known	chr19	+	1080	4	FSM	ENSG00000142046.15	ENST00000392002.7	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	33.2365260920372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	13	True	NA	17	True	ATTAAA	-24	NA	41376532	41384083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383714
transcript_100716.known	chr19	+	725	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.7521042876493	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	1	True	NA	17	True	ATTAAA	-24	NA	41376739	41384083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
transcript_100717.known	chr19	+	864	4	FSM	ENSG00000142046.15	ENST00000436170.6	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	25.694789787469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	10	False	NA	17	True	ATTAAA	-24	NA	41376577	41384083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383885
transcript_100719.known	chr19	-	1007	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.09901951359278	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-10	True	NA	-1	True	AGTAAA	-20	NA	41364149	41354416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
transcript_10072.known	chr1	-	3273	6	FSM	ENSG00000162407.9	ENST00000371250.4	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_5	8.97552226892675	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGACTTGCAAGCCTGG	-1	True	NA	-15	True	AATAAA	-19	NA	56579563	56494760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_56496677_56511975_56512153_56523822_56523881_56524276_56524555_56536954_56537113_56578877
transcript_100722.known	chr19	+	1610	3	FSM	ENSG00000142046.15	ENST00000542945.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	34	True	NA	-6	True	ATTAAA	-1	NA	41376772	41384060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771
transcript_100724.known	chr19	-	421	3	FSM	ENSG00000123810.9	ENST00000601597.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGAGCCTGTTTCTT	9	True	NA	0	True	AATAAA	-16	NA	41364092	41361009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41361204_41363431_41363524_41363957
transcript_100725.known	chr19	-	463	2	FSM	ENSG00000177191.3	ENST00000601379.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGAGCTCAGGACGA	26	True	NA	NA	False	NA	NA	NA	41427362	41426055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41426440_41427283
transcript_100726.known	chr19	-	1065	6	FSM	ENSG00000105341.19	ENST00000417807.7	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	135.320951814566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGGCTGTTAGTA	-1	True	NA	NA	False	NA	NA	NA	41439539	41431987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_100727.known	chr19	-	1700	6	FSM	ENSG00000105341.19	ENST00000221943.14	1700	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	76.9919476309049	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	3	True	NA	-1	True	ATTAAA	-19	NA	41439912	41431317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_100729.known	chr19	-	1622	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	81.3664550045042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	NA	False	NA	-22	True	NA	NA	NA	41439936	41431338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
transcript_100730.known	chr19	-	1134	5	FSM	ENSG00000105341.19	ENST00000301183.15	1134	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	148.860673114157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCATAGTATTGCTGG	-1	True	NA	NA	False	ACTAAA	-15	NA	41439539	41431755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_100731.known	chr19	-	979	5	FSM	ENSG00000105341.19	ENST00000589970.5	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	50.8379779298902	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACTACTGACACTTT	7	True	NA	NA	False	NA	NA	NA	41439908	41431871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_100738.known	chr19	-	1454	4	FSM	ENSG00000105341.19	ENST00000438807.7	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	97.6057830709271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	5	True	NA	-1	True	ATTAAA	-19	NA	41439910	41431317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433536_41433674_41438217_41438415_41439881
transcript_100740.known	chr19	-	1727	1	FSM	ENSG00000105341.19	ENST00000597608.1	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	CATAAA	-26	NA	41440692	41438965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41439000_41440700
transcript_100741.known	chr19	+	1718	1	FSM	ENSG00000270164.2	ENST00000597199.1	1718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCACGTGTGATTTGAT	2	True	NA	NA	False	AATAAA	-19	NA	41535182	41536900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41535200_41536900
transcript_100742.known	chr19	+	601	2	FSM	ENSG00000268027.5	ENST00000601116.5	601	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATAGTGTGCCCAGAT	2	True	NA	NA	False	NA	NA	NA	41549519	41550705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41549553_41550137
transcript_100743.known	chr19	+	1691	8	FSM	ENSG00000007129.18	ENST00000407170.6	1691	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.728431359084683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCTCTTTTTCTGCTCA	0	True	NA	NA	False	AATAAA	-17	NA	41549517	41586843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41549553_41564681_41565057_41577199_41577560_41579269_41579629_41584346_41584444_41585442_41585496_41585839_41585872_41586463
transcript_100750.known	chr19	+	2021	6	FSM	ENSG00000105372.8	ENST00000598742.6	2021	6	0	0	0	0	multi-exon	FALSE	canonical	3	22127	junction_5	5790.38905774042	6926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTGTTTACACTCAGCAA	-1	True	NA	13	True	AATAAA	-14	NA	41860254	41872925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860290_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_100751.known	chr19	+	668	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	13167.7527558806	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	-1	True	NA	31	True	AATAAA	-16	NA	41860254	41871416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_100752.known	chr19	+	526	6	FSM	ENSG00000105372.8	ENST00000593863.5	526	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	13256.6799101434	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	15	True	NA	31	True	AATAAA	-16	NA	41860445	41871416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860495_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_100758.known	chr19	+	500	6	FSM	ENSG00000105372.8	ENST00000221975.6	500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13281.5229909826	6272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	1	True	NA	31	True	AATAAA	-16	NA	41860256	41871416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860290_41860784_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_100759.known	chr19	+	313	4	FSM	ENSG00000105372.8	ENST00000598261.2	313	4	0	0	0	0	multi-exon	FALSE	canonical	2	1017	junction_3	14035.5070050529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGTGGCCCGCCGGGT	22	False	NA	NA	False	NA	NA	NA	41860277	41869146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860290_41860774_41860846_41861111_41861226_41869030
transcript_100761.known	chr19	+	3393	30	FSM	ENSG00000076928.18	ENST00000599846.5	3393	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	69.2870092814837	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGTGTGTGTGAT	-25	True	NA	28	True	AATATA	-12	NA	41883183	41907448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41897945_41898114_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_10077.nic	chr1	-	4840	2	ISM	ENSG00000162407.9	ENST00000371250.4	3273	6	-95	38293	-95	-8746	5prime_fragment	FALSE	canonical	3	181	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACATAATAGGTTGCTGG	-1	True	NA	NA	False	AAAAAG	-14	NA	56579658	56533053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_56537113_56578877
transcript_100770.known	chr19	+	3229	29	FSM	ENSG00000076928.18	ENST00000354532.8	3229	29	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	31.4068106483616	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	-25	True	NA	32	True	AATATA	-16	NA	41883183	41907452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_10078.known	chr1	+	9355	9	FSM	ENSG00000162409.12	ENST00000371244.9	9355	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	8.67107259801231	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTCTGCTCCATCA	-31	True	NA	15	True	ATTAAA	-25	NA	56645313	56715335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_56645482_56674380_56674523_56691393_56691488_56692357_56692503_56693764_56693853_56695934_56696160_56703970_56704476_56706091_56706219_56707474
transcript_100780.known	chr19	+	3171	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	33.3016516106934	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	31	True	NA	34	True	AATATA	-18	NA	41884447	41907454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_100790.known	chr19	+	3439	28	FSM	ENSG00000076928.18	ENST00000600274.5	3439	28	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_1	31.3396368757867	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	-26	True	NA	34	True	AATATA	-18	NA	41883182	41907454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_100792.known	chr19	+	3091	28	FSM	ENSG00000076928.18	ENST00000347545.8	3091	28	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	50.9714140279723	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	16	True	NA	34	True	AATATA	-18	NA	41883224	41907454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_1008.known	chr1	+	783	3	FSM	ENSG00000224051.7	ENST00000488011.1	783	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	49.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGTTCCTGGAGGGCC	-2	True	NA	NA	False	NA	NA	NA	1325240	1327471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1325596_1326835_1327033_1327240
transcript_100804.nic	chr19	+	3269	28	NIC	ENSG00000076928.18	novel	3171	29	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	52.1332575541743	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGTGTGTGTGAT	1	True	NA	28	True	AATATA	-12	NA	41884244	41907448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_100820.known	chr19	+	2986	27	FSM	ENSG00000076928.18	ENST00000378152.8	2986	27	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_25	68.6518206984134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	63	False	NA	34	True	AATATA	-18	NA	41884369	41907454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906702_41906804_41907104
transcript_100845.known	chr19	+	2272	4	FSM	ENSG00000076928.18	ENST00000600387.5	2272	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	58.8614191696621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCCTGGTGGTAG	2094	False	NA	NA	False	NA	NA	NA	41883172	41890776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751
transcript_100850.known	chr19	-	3551	23	FSM	ENSG00000105409.19	ENST00000648268.1	3551	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_15	18.6722492635993	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-3	True	NA	-1	True	AATATA	-18	NA	41994230	41966581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
transcript_100851.known	chr19	-	3628	23	FSM	ENSG00000105409.19	ENST00000545399.6	3628	23	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_22	34.0120299573281	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGGTGTGTGTGTTGTGC	NA	False	NA	-3	True	AATATA	-16	NA	41994270	41966583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988602_41994070
transcript_100856.known	chr19	-	653	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	642.117347141471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	9624	False	NA	-16	True	AATAAA	-28	NA	41959266	41956680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_100857.known	chr19	-	750	5	FSM	ENSG00000105404.11	ENST00000222008.11	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_2	153.451946875887	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCCCAGCATCTTCTG	7	True	NA	-18	True	AATAAA	-26	NA	41959321	41956682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_100859.known	chr19	-	628	4	FSM	ENSG00000105404.11	ENST00000601891.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	774.081103990761	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	29	True	NA	-16	True	AATAAA	-28	NA	41959299	41956680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41956935_41958285_41958384_41958735_41958949_41959236
transcript_100863.known	chr19	-	771	3	FSM	ENSG00000105404.11	ENST00000601476.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	1625	junction_2	41.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGAAGCCGAGGAGTAT	9621	False	NA	NA	False	NA	NA	NA	41959269	41957858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41958384_41958735_41958949_41959236
transcript_100864.known	chr19	-	3818	22	FSM	ENSG00000105409.19	ENST00000441343.5	3818	22	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_14	18.4852702284684	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	13	False	NA	-1	True	AATATA	-18	NA	41994214	41966581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
transcript_100873.known	chr19	+	3309	2	FSM	ENSG00000105732.13	ENST00000222339.7	3309	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCTAAATTGGATTT	NA	False	NA	NA	False	NA	NA	NA	42068476	42081410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42068962_42078586
transcript_100874.known	chr19	+	3087	2	FSM	ENSG00000105732.13	ENST00000359044.5	3087	2	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGAGTGGAATTTGG	-7	True	NA	9	True	AATAAA	-17	NA	42076165	42081552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42076287_42078586
transcript_100882.known	chr19	+	759	3	FSM	ENSG00000254887.1	ENST00000527895.1	759	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGCTAAGCTCAGAGA	NA	False	NA	NA	False	AATAAA	-28	NA	42132554	42137099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42132762_42132904_42133029_42136671
transcript_100883.known	chr19	-	2193	11	FSM	ENSG00000105723.13	ENST00000222330.8	2193	11	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_10	25.8835855321476	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	1	True	NA	-5	True	AATAAA	-16	NA	42242602	42230189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954_42240143_42242182
transcript_100888.nnic	chr19	-	2023	5	NNC	ENSG00000160570.14	novel	1905	5	NA	NA	212	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	107.80624981883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	2698	False	NA	-14	True	ATTAAA	-28	NA	42217457	42198597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217293
transcript_100891.known	chr19	-	1894	5	FSM	ENSG00000160570.14	ENST00000595337.5	1894	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	111.578167667335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATAGGTGGGCATCGGC	4	True	NA	-29	True	ATTAAA	-13	NA	42220123	42198612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42220073
transcript_100892.known	chr19	-	463	5	FSM	ENSG00000160570.14	ENST00000598090.5	463	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	97.4230465547039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCAGCCTTGGAGCAGG	-13	True	NA	NA	False	NA	NA	NA	42217712	42199792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42199830_42201988_42202073_42209699_42209841_42215132_42215253_42217631
transcript_100894.known	chr19	-	550	4	FSM	ENSG00000160570.14	ENST00000600559.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	116.584733134317	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCCTGCGGGGCGTGTT	-9	True	NA	NA	False	NA	NA	NA	42217708	42199602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42199830_42209699_42209841_42215147_42215253_42217631
transcript_100897.known	chr19	-	555	4	FSM	ENSG00000105722.10	ENST00000593944.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	49.0713765855412	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTGTGGTGGCCCGCCG	1	True	NA	NA	False	NA	NA	NA	42253899	42249592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42253841
transcript_100898.known	chr19	-	2672	4	FSM	ENSG00000105722.10	ENST00000222329.9	2672	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	12.0830459735946	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGATCAATGTCCTAG	-2	True	NA	-26	True	AATAAA	-17	NA	42255128	42247568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42254977
transcript_1009.known	chr1	+	1101	2	FSM	ENSG00000224051.7	ENST00000464957.1	1101	2	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTATTACACGCGT	5310	False	NA	NA	False	NA	NA	NA	1324755	1327994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1325103_1327240
transcript_100901.known	chr19	+	3982	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	-8	True	NA	NA	False	NA	NA	NA	42220311	42228201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42220388_42224214_42224306_42224386
transcript_100905.known	chr19	+	573	3	FSM	ENSG00000167625.11	ENST00000597945.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	25	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAAGTCCTCTCACACC	57	False	NA	NA	False	NA	NA	NA	42220376	42224609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42220636_42224214_42224306_42224386
transcript_100915.known	chr19	-	1905	5	FSM	ENSG00000160570.14	ENST00000596251.6	1905	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	71.5209759441242	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	22	True	NA	-14	True	ATTAAA	-28	NA	42217677	42198597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217631
transcript_100918.known	chr19	-	1098	6	FSM	ENSG00000079462.8	ENST00000538771.5	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	230.58967886703	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	9	True	NA	-22	True	ATTAAA	-17	NA	42302777	42297032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
transcript_100919.known	chr19	-	582	6	FSM	ENSG00000079462.8	ENST00000595530.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	351.865883540874	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCGGGCCCACTTCC	16	True	NA	NA	False	NA	NA	NA	42302770	42297279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_100921.known	chr19	-	465	6	FSM	ENSG00000079462.8	ENST00000596265.5	465	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	439.951997381533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTGAACGAGCTGGTAC	58	False	NA	NA	False	NA	NA	NA	42302728	42297315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42300008_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_100924.known	chr19	-	1054	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_1	34.6292867382509	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTTCCTGCTTTAT	-15	True	NA	-24	True	ATTAAA	-15	NA	42302624	42297034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
transcript_100929.known	chr19	-	649	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	395.598913041985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTTCCTGCTTTA	494	False	NA	-25	True	ATTAAA	-14	NA	42302292	42297035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
transcript_100931.known	chr19	-	646	5	FSM	ENSG00000079462.8	ENST00000601865.5	646	5	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_4	254.820034534179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTGGGTGGGCACC	9	True	NA	NA	False	NA	NA	NA	42302777	42300088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
transcript_100938.known	chr19	+	1523	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	6	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	-4	True	NA	6	True	AATAAA	-16	NA	42302131	42310814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42302504_42309578_42310186_42310270
transcript_100940.known	chr19	-	726	3	FSM	ENSG00000079462.8	ENST00000597333.1	726	3	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_1	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATATAGCCACAGTTGGC	-25	True	NA	NA	False	NA	NA	NA	42302496	42299916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42300288_42301949_42302040_42302231
transcript_100942.known	chr19	+	1641	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	NA	False	NA	5	True	AATAAA	-15	NA	42302097	42310813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42302504_42309578
transcript_100944.known	chr19	+	1271	3	FSM	ENSG00000188368.11	ENST00000595750.2	1271	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	3	True	NA	5	True	AATAAA	-15	NA	42306952	42310813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42307074_42309578_42310186_42310270
transcript_100946.known	chr19	+	2219	15	FSM	ENSG00000167619.13	ENST00000673187.1	2219	15	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_5	3.00424869211616	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATAACATGGCTTC	-8	True	NA	10	True	AATAAA	-13	NA	42313376	42325053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42313497_42314271_42314347_42314450_42314529_42314612_42314700_42314791_42314894_42314992_42315078_42315187_42315260_42315371_42315441_42316480_42316562_42316661_42316741_42316869_42316964_42317708_42317882_42320316_42320438_42323582_42323790_42324277
transcript_10096.known	chr1	-	5301	15	FSM	ENSG00000173406.16	ENST00000371236.7	5301	15	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_8	28.2883296049225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTGGCTTTATTCT	-12	True	NA	1	True	AATAAA	-18	NA	57424060	56994777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57062883_57062944_57069359_57069426_57071022_57071062_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57423929
transcript_100964.known	chr19	+	251	2	FSM	ENSG00000213904.10	ENST00000599276.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGCTGGGCATAGCT	4417	False	NA	7	True	AGTAAA	-17	NA	42401581	42408442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42401648_42408257
transcript_100973.known	chr19	-	3427	8	FSM	ENSG00000079385.23	ENST00000403444.7	3427	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCGACATGCTGCCTCA	-9	True	NA	-8	True	AATAAA	-13	NA	42528478	42507313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42509229_42510888_42510921_42512349_42512480_42518947_42519236_42521266_42521522_42521923_42522203_42527040_42527401_42528310
transcript_100974.known	chr19	-	1263	7	FSM	ENSG00000079385.23	ENST00000403461.5	1263	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.23608130649127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTGCTGATGTATTT	89	False	NA	NA	False	AGTAAA	-28	NA	42528380	42509091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42509229_42510888_42510921_42512349_42512480_42521266_42521522_42521923_42522203_42527040_42527401_42528310
transcript_100975.known	chr19	-	301	2	FSM	ENSG00000231412.3	ENST00000595748.2	721	2	114	306	114	-306	multi-exon	TRUE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGAAAAGGCCCTG	107	False	NA	NA	False	NA	NA	NA	43331430	43329294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43329509_43331343
transcript_100976.known	chr19	+	2195	9	FSM	ENSG00000204936.10	ENST00000618265.5	2195	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	4	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGTTCTATACGCAATT	-1	True	NA	23	True	CATAAA	-24	NA	43353685	43363172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43353767_43353852_43353994_43354206_43354393_43355660_43355784_43355991_43356109_43360264_43360406_43361142_43361329_43361444_43361580_43362087
transcript_100978.known	chr19	-	1642	5	FSM	ENSG00000124466.9	ENST00000244333.4	1642	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.9104277432436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-2	True	NA	-7	True	AATAAA	-23	NA	43465608	43460786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43461848_43463125_43463288_43463598_43463770_43464324_43464457_43465492
transcript_100979.known	chr19	-	574	3	FSM	ENSG00000124466.9	ENST00000594326.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCACTCGGGATGGAGT	6359	False	NA	NA	False	GGGGCT	-15	NA	43463963	43461800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43461848_43463125_43463288_43463598
transcript_100980.nic	chr19	-	1336	2	ISM	ENSG00000124466.9	ENST00000594326.1	574	3	563	-1014	563	0	3prime_fragment	FALSE	canonical	3	37	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	6922	False	NA	-7	True	AATAAA	-23	NA	43463400	43460786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43461848_43463125
transcript_100981.known	chr19	-	2591	16	FSM	ENSG00000176531.11	ENST00000292140.10	2402	16	-189	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	14.4067885233162	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTTTCCAGC	3093	False	NA	2	True	ATTAAA	-20	NA	43504935	43475102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43475545_43478046_43478133_43479376_43479594_43486265_43486323_43486608_43486697_43486779_43486871_43487023_43487124_43494701_43494816_43495255_43495340_43495494_43495621_43497117_43497280_43497747_43497877_43501733_43501872_43502100_43502284_43503905_43504133_43504588
transcript_100989.nnic	chr19	-	945	7	NNC	ENSG00000105755.8	novel	920	7	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	47.2772555135013	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-17	True	NA	-3	True	AATAAA	-17	NA	43527259	43506718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526317_43526514_43526660_43527096
transcript_100990.nic	chr19	-	1135	7	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	46.9766490456222	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-14	True	NA	-3	True	AATAAA	-17	NA	43527256	43506718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43526936
transcript_100991.known	chr19	-	920	7	FSM	ENSG00000105755.8	ENST00000292147.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	22.6274169979695	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	4	True	NA	-3	True	AATAAA	-17	NA	43527201	43506718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43527096
transcript_100993.known	chr19	-	702	6	FSM	ENSG00000105755.8	ENST00000594342.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	47.2922826685285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGACACTGCACCTCT	0	True	NA	-76	True	NA	NA	NA	43527205	43506791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526514_43526660_43527096
transcript_100995.nnic	chr19	-	669	5	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	55.8233821977852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-2	True	NA	-3	True	AATAAA	-17	NA	43527244	43506718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43527096
transcript_101006.known	chr19	-	2052	17	FSM	ENSG00000073050.12	ENST00000262887.10	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	20.4110111214511	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-1	True	NA	-21	True	AATAAA	-17	NA	43575527	43543310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_101014.known	chr19	-	1994	16	FSM	ENSG00000073050.12	ENST00000543982.5	1994	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_15	57.0943079474653	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGTCTCCCAAAAC	-37	True	NA	-22	True	AATAAA	-16	NA	43575563	43543311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43575407
transcript_101015.nic	chr19	-	1971	16	NIC	ENSG00000073050.12	novel	1994	16	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	55.9355184316926	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGTCTCCCAAAAC	-8	True	NA	-22	True	AATAAA	-16	NA	43580497	43543311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43580364
transcript_101016.nic	chr19	-	1988	16	NIC	ENSG00000073050.12	novel	2052	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	56.7129222977934	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGTCTCCCAAAAC	4914	False	43575623	-22	True	AATAAA	-16	NA	43575575	43543311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43574909_43575003_43575407
transcript_10103.nnic	chr1	-	707	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-40	1406	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	42.6692707538653	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTTTCCTGTCTTGG	230	False	NA	NA	False	AATAAA	-16	NA	57424100	57144010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423929
transcript_101038.known	chr19	-	1147	8	FSM	ENSG00000073050.12	ENST00000595789.5	1147	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	17.1749699224405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGCTTGGGGCCAAGTA	20	True	NA	NA	False	NA	NA	NA	43575506	43552072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43552276_43552796_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_101039.nic	chr19	-	954	8	ISM	ENSG00000073050.12	ENST00000262887.10	2052	17	-121	9545	-85	135	5prime_fragment	FALSE	canonical	3	187	junction_1	17.7637558080537	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCCCCAGCAAACCAC	4841	False	NA	NA	False	AAGAAA	-2	NA	43575648	43552855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_10104.nic	chr1	-	1918	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	24.7941525364349	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-15	True	NA	NA	False	AATAAA	-19	NA	58546744	58480718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
transcript_101048.known	chr19	+	569	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.5592345297419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	3747	False	NA	NA	False	TATAAA	-17	NA	43580543	43582098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
transcript_101049.known	chr19	+	557	4	FSM	ENSG00000234465.11	ENST00000569031.6	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	28.3901391331568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	89	False	NA	NA	False	TATAAA	-17	NA	43580637	43582098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43580670_43581211_43581365_43581562_43581704_43581867
transcript_10105.known	chr1	-	1861	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.7561183575623	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	3	True	NA	NA	False	AATAAA	-19	NA	58546726	58480718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_101051.known	chr19	+	706	3	FSM	ENSG00000234465.11	ENST00000562365.2	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTGGTGTGATGTAT	488	False	NA	NA	False	TATAAA	-23	NA	43581036	43582104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43581365_43581562_43581704_43581867
transcript_101053.known	chr19	-	9686	3	FSM	ENSG00000167378.10	ENST00000422989.6	9686	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	7	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCATGGTGGTCATTTG	2	True	NA	-5	True	AATAAA	-20	NA	43596134	43584366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43593368_43594808_43595341_43595981
transcript_101056.known	chr19	-	827	4	FSM	ENSG00000131116.12	ENST00000598676.1	827	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	81.0856885577775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTAGGCAGAGCCC	14	True	NA	NA	False	NA	NA	NA	43619599	43607627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43608108_43608504_43608604_43614228_43614435_43619557
transcript_101057.known	chr19	+	867	3	FSM	ENSG00000124444.16	ENST00000533118.5	867	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGGGAAGGGAGTG	67	False	NA	101	True	NA	NA	NA	43596479	43599494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43596586_43597096_43597194_43598830
transcript_101061.known	chr19	+	830	3	FSM	ENSG00000124444.16	ENST00000529930.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGCTTCAGTCTTTGG	-20	True	NA	21	True	AATAAA	-21	NA	43596594	43599414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43596744_43597096_43597194_43598830
transcript_101065.known	chr19	+	859	3	FSM	ENSG00000124444.16	ENST00000528387.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTCTCCCTTATT	49	False	NA	NA	False	NA	NA	NA	43596574	43599525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43596639_43597093_43597194_43598830
transcript_101068.known	chr19	-	1162	3	FSM	ENSG00000131116.12	ENST00000300811.8	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	57	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGTGCTGGGTGAGT	-16	True	NA	-1	True	AATAGA	-18	NA	43619629	43607223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43608108_43614228_43614435_43619557
transcript_101071.known	chr19	-	2189	9	FSM	ENSG00000105767.3	ENST00000222374.3	2189	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	16.4829457318769	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGGGTGGCTGTGTG	-28	True	NA	NA	False	ATTAAA	-16	NA	43639850	43622367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43623440_43624113_43624243_43625077_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
transcript_10108.known	chr1	-	1820	1	FSM	ENSG00000184292.7	ENST00000371225.4	1820	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCAGAAGTCGGCATTT	0	True	NA	NA	False	AATAAA	-31	NA	58577252	58575432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58575400_58577300
transcript_101082.nic	chr19	-	1060	8	NIC	ENSG00000105767.3	novel	302	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	21.1032447451929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTGTTGTGAAGATT	-32	True	NA	NA	False	AATAAA	-17	NA	43639854	43624835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43624904_43625077_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
transcript_101086.nic	chr19	-	1229	7	ISM	ENSG00000105767.3	ENST00000222374.3	2189	9	-4	2473	-4	-5	5prime_fragment	FALSE	canonical	3	62	junction_3	8.13770374382247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAACAAGGCTGTTGTGA	-32	True	NA	NA	False	AATAAA	-12	NA	43639854	43624840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
transcript_101087.known	chr19	-	1254	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	34.6333974975344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGGCATGCCTGTG	1	True	NA	NA	False	AATAAA	-16	NA	43670166	43646094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_10109.known	chr1	-	378	5	FSM	ENSG00000162601.11	ENST00000483003.5	378	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	24.3451740597598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTTAAAAATTATGGAAT	-7	True	NA	-128	True	TATAAA	-11	NA	58700072	58690187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_101091.nic	chr19	-	1865	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	33.5939809423586	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	5993	False	NA	-21	True	CATAAA	-17	NA	43668378	43648579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43667776
transcript_101094.known	chr19	-	1368	7	FSM	ENSG00000011422.12	ENST00000340093.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	17.2626765016321	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-2	True	NA	-20	True	CATAAA	-18	NA	43670169	43648578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_101104.known	chr19	-	5491	14	FSM	ENSG00000105771.14	ENST00000270066.11	5491	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	28.4157636058188	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCGATTGGTCTCTAT	-27	True	NA	NA	False	AATAAA	-29	NA	43754962	43727982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_10112.known	chr1	-	698	3	FSM	ENSG00000162601.11	ENST00000489282.1	698	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTTTCCCTACATT	-12	True	NA	NA	False	AATAAA	-26	NA	58700077	58692405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58692932_58695128_58695208_58699984
transcript_101124.known	chr19	-	681	3	FSM	ENSG00000105771.14	ENST00000598886.1	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGCCGTGACAGGTG	13	True	NA	NA	False	NA	NA	NA	43754922	43747796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43748053_43750591_43750748_43754653
transcript_101127.known	chr19	-	1956	9	FSM	ENSG00000104783.15	ENST00000648319.1	1956	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.96452920568771	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCATTTCTCTCTAAAC	3	True	NA	-6	True	AATAAA	-15	NA	43780973	43766532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43767090_43767539_43767708_43768962_43769033_43769441_43769561_43769718_43769830_43771999_43772136_43774191_43774620_43776540_43776637_43780702
transcript_10113.known	chr1	-	3257	1	FSM	ENSG00000177606.8	ENST00000371222.4	3257	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGATCTTGAATTGCTT	-2	True	NA	-6	True	AATAAA	-17	NA	58784047	58780790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58780800_58784000
transcript_101131.known	chr19	-	1519	4	FSM	ENSG00000159871.15	ENST00000594013.5	1519	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGCAGAGACTGTGGG	-6	True	NA	NA	False	NA	NA	NA	43800029	43796958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43797830_43798454_43798602_43798811_43798989_43799705
transcript_101132.nic	chr19	-	822	2	ISM	ENSG00000267058.1	ENST00000587128.1	2193	3	-18	9116	-18	-2	5prime_fragment	FALSE	canonical	3	25	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCTGAAAGAGGAAAGAA	-13	True	NA	NA	False	NA	NA	NA	43901823	43900919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43900955_43901036
transcript_101139.known	chr19	-	3926	10	FSM	ENSG00000124459.12	ENST00000269973.10	3926	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	14.9369043349387	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTGCCAAGTATTAT	-1	True	NA	-1	True	ATTAAA	-39	NA	43935282	43912623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43932603_43932691_43934425_43934695_43934923
transcript_10114.known	chr1	-	317	3	FSM	ENSG00000235215.2	ENST00000451090.1	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTCACATTGAT	NA	False	NA	NA	False	NA	NA	NA	59078116	59055998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_59056186_59059637_59059683_59078031
transcript_101143.known	chr19	+	2612	5	FSM	ENSG00000204920.11	ENST00000270014.7	2612	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	9.57535900110278	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	-15	True	NA	42	True	ATTAAA	-18	NA	43984187	43998326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43984246_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_101144.known	chr19	+	4104	5	FSM	ENSG00000159882.13	ENST00000429154.7	4104	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	6.29980158417708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGTAAGTTCACAATG	-19	True	NA	NA	False	AATAAA	-18	NA	44002956	44013924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44003108_44007010_44007094_44008789_44008917_44009083_44009171_44010268
transcript_101145.known	chr19	+	1794	1	FSM	ENSG00000159882.13	ENST00000589275.1	1794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAACTGCCATATTAT	-17	True	NA	NA	False	AATAAA	-1	NA	44002958	44004752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44003000_44004800
transcript_101147.known	chr19	+	2399	5	FSM	ENSG00000178386.13	ENST00000434772.8	2399	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.75925291729789	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGTTTCTGGAAT	6	True	NA	NA	False	AATAAA	-27	NA	44052035	44067999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44066063
transcript_101149.known	chr19	+	4336	5	FSM	ENSG00000186026.7	ENST00000421176.4	4336	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.11803398874989	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGGTGCATCACATTT	-8	True	NA	7	True	AATAAA	-19	NA	44072158	44089613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44072292_44076321_44076405_44081014_44081142_44082012_44082106_44085713
transcript_101150.known	chr19	+	1614	4	FSM	ENSG00000159885.14	ENST00000391960.4	1614	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	20	True	NA	9	True	ATTAAA	-22	NA	44025378	44033110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44025479_44027022_44027150_44027397_44027491_44031816
transcript_101152.known	chr19	+	3980	6	FSM	ENSG00000267680.6	ENST00000336976.10	3980	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	15.9824904192056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCAGGCATTTT	-2	True	NA	75	True	AATGAA	-26	NA	44094391	44109886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_101153.known	chr19	+	4447	5	FSM	ENSG00000256294.8	ENST00000262894.11	4447	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	4.55521678957215	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGTGGGGCTAATATT	-17	True	NA	19	True	ATTAAA	-28	NA	44113398	44134822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44113570_44115759_44115843_44118187_44118315_44118481_44118575_44130849
transcript_101159.known	chr19	-	3199	2	FSM	ENSG00000186019.12	ENST00000592946.1	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTACTCTTCCTAGTGA	6	True	NA	NA	False	AATAAA	-43	NA	44113145	44105462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44108338_44112821
transcript_101161.known	chr19	+	1552	1	FSM	ENSG00000267680.6	ENST00000589060.1	1552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTTTTTATTACCTA	-4	True	NA	NA	False	AAAAAG	-3	NA	44094389	44095941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44094400_44095900
transcript_101165.known	chr19	+	2292	6	FSM	ENSG00000263002.8	ENST00000592437.5	2292	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	10.2058806577385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAACAGAA	-3	True	NA	NA	False	NA	NA	NA	44141556	44158119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_101167.known	chr19	+	4607	6	FSM	ENSG00000263002.8	ENST00000426739.7	4607	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	14.4166570327521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGTCAATGAATTG	-6	True	NA	9	True	ATTAAA	-25	NA	44141553	44160313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_10117.known	chr1	+	2052	17	FSM	ENSG00000172456.18	ENST00000371218.8	2052	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	27.767941834965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	-6	True	NA	8	True	AATAAA	-19	NA	59296980	59762724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59641279_59641352_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_101170.known	chr19	+	447	7	FSM	ENSG00000167380.17	ENST00000588742.5	447	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	55.8380595014627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGATTTGAAGTTAGAA	9	True	NA	NA	False	NA	NA	NA	44165103	44175033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_101171.known	chr19	+	817	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	47.1822000334872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	9	True	NA	NA	False	ATTAAA	-16	NA	44165103	44175429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_101173.known	chr19	+	2563	6	FSM	ENSG00000167380.17	ENST00000337433.10	2563	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	40.4801185769014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTGTCATTTGAATTC	5	True	NA	14	True	TATAAA	-16	NA	44165099	44177685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_101175.known	chr19	+	716	6	FSM	ENSG00000167380.17	ENST00000413984.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	52.4228957612988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTAAACTGTGAGCA	8	True	NA	-79	True	NA	NA	NA	44165102	44175158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_101176.known	chr19	+	576	6	FSM	ENSG00000167380.17	ENST00000586914.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	47.2508200987031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAGAGAATCAGAAGAA	6	True	NA	NA	False	NA	NA	NA	44165100	44175530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_101177.known	chr19	+	3055	6	FSM	ENSG00000131115.16	ENST00000621083.4	3055	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	18.0930926046378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	-25	True	NA	15	True	AATAAA	-20	NA	44212527	44237267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44212586_44213086_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_101181.known	chr19	+	3049	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	13.2875881934985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	-21	True	NA	16	True	AATAAA	-21	NA	44212531	44237268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_101183.known	chr19	+	2943	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.1081121109256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	22	True	NA	15	True	AATAAA	-20	NA	44212574	44237267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
transcript_101184.known	chr19	-	3190	5	FSM	ENSG00000159917.17	ENST00000291182.9	3190	5	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	8.0156097709407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	-13	True	NA	NA	False	AGTAAA	-16	NA	44305025	44286347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44289197_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_101185.known	chr19	-	3162	5	FSM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.52268050859363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATTGTTAATACTTG	-13	True	NA	NA	False	AAAAAG	-12	NA	44305025	44286363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44289197_44298819_44298904_44299605_44299733_44303389_44303453_44304970
transcript_101186.nic	chr19	-	758	4	ISM	ENSG00000159917.17	ENST00000650576.1	3162	5	-8	12035	-8	-9594	5prime_fragment	FALSE	canonical	3	21	junction_3	2.16024689946929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAACATCTGTCACA	-21	True	NA	NA	False	NA	NA	NA	44305033	44298398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_44298904_44299605_44299733_44303389_44303453_44304970
transcript_101190.known	chr19	-	2388	5	FSM	ENSG00000267508.6	ENST00000591679.5	2388	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.92442890089805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACACTGGTTCCATTTC	37	False	NA	NA	False	NA	NA	NA	44401575	44385928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44388103_44392339_44392467_44394519_44394541_44397198_44397257_44401567
transcript_101192.known	chr19	-	6031	4	FSM	ENSG00000267508.6	ENST00000614994.5	6031	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCCCTTATGTGTGA	4	True	NA	NA	False	NA	NA	NA	44401608	44382297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44388103_44392339_44392467_44397198_44397257_44401567
transcript_101193.known	chr19	-	4956	6	FSM	ENSG00000278318.5	ENST00000614049.5	4956	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.66643677887566	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTTGGCTTTTTCT	-9	True	NA	0	True	ATTAAA	-21	NA	44448472	44426253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44430543_44432221_44432367_44442562_44442622_44442813_44443025_44447512_44447601_44448308
transcript_101195.known	chr19	-	1023	6	FSM	ENSG00000167384.11	ENST00000586637.5	1023	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	23.7267781209333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGTAAACAGTCATCAG	-6	True	NA	NA	False	CATAAA	-35	NA	44500522	44477789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44485035_44485158_44497283_44497378_44500274
transcript_101198.known	chr19	-	3131	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	18.2345825288105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-8	True	NA	NA	False	AGTAAA	-20	NA	44500524	44475638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
transcript_10120.nic	chr1	+	2012	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	68	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	16.5939748101532	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	NA	False	NA	8	True	AATAAA	-19	NA	59296705	59762724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_101200.known	chr19	+	3078	8	FSM	ENSG00000073008.15	ENST00000403059.8	3078	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	20.9878487682365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGTGTGCAATGGGGT	26	True	NA	21	True	ATTAAA	-21	NA	44643909	44663583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44658766_44661291_44661324_44661739
transcript_101201.known	chr19	+	5792	8	FSM	ENSG00000073008.15	ENST00000425690.8	5792	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	13.114877048604	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCGAAGTGATTGTTTG	26	True	NA	NA	False	AATAAA	-29	NA	44643909	44666162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44658901_44661291_44661324_44661739
transcript_101203.known	chr19	+	3166	7	FSM	ENSG00000073008.15	ENST00000344956.8	3166	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	18.8502873541316	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGTGTGCAATGGGGT	NA	False	NA	21	True	ATTAAA	-21	NA	44643797	44663583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44661291_44661324_44661739
transcript_101204.known	chr19	+	1344	6	FSM	ENSG00000073008.15	ENST00000406449.8	1344	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	9.41063228481487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCGTATAGGGTCTTA	72	False	NA	NA	False	NA	NA	NA	44644096	44659094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741
transcript_101206.known	chr19	+	819	4	FSM	ENSG00000069399.15	ENST00000474300.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7.1336448530109	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCTCAGGCACCAGTC	39	False	NA	NA	False	NA	NA	NA	44757588	44759825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44757724_44758245_44758414_44758723_44758842_44759427
transcript_101214.known	chr19	+	1576	11	FSM	ENSG00000142273.13	ENST00000647358.2	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	14.9786514746822	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGGCCAGCAGGG	-3	True	NA	27	True	AATAAA	-38	NA	44777889	44800652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_10122.known	chr1	+	1873	16	FSM	ENSG00000172456.18	ENST00000303721.12	1873	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.8096131631513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTTCATTTCAAAA	14	True	NA	14	True	AATAAA	-25	NA	59297093	59762730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_101221.known	chr19	+	1441	10	FSM	ENSG00000142273.13	ENST00000341505.4	1441	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	28.975085082801	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	-24	True	NA	9	True	AATAAA	-20	NA	44777868	44800634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_101223.nic	chr19	+	1762	10	NIC	ENSG00000142273.13	novel	1576	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	74	junction_4	15.7582038206872	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	NA	False	NA	9	True	AATAAA	-20	NA	44777840	44800634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_44778285_44780904_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_101226.nnic	chr19	+	1328	9	NIC	ENSG00000142273.13	novel	1576	11	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	35.6491146453878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	NA	False	NA	9	True	AATAAA	-20	NA	44777840	44800634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_44778285_44780904_44781052_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_101236.known	chr19	+	2409	15	FSM	ENSG00000187244.12	ENST00000270233.12	2409	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	18.5922959687005	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGGCCAGAGCTTCCT	-1	True	NA	24	True	AATAAA	-24	NA	44809102	44821421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44818883_44819055_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_101239.nic	chr19	+	2595	14	NIC	ENSG00000187244.12	novel	2409	15	NA	NA	14	0	intron_retention	FALSE	canonical	3	119	junction_1	18.3631996283795	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCCTGTGGCCAGAGC	20	False	NA	19	True	AATAAA	-19	NA	44809084	44821416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_101244.known	chr19	+	904	4	FSM	ENSG00000187244.12	ENST00000588603.1	904	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	17.2111075245674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	26	False	NA	NA	False	NA	NA	NA	44809129	44812953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477
transcript_101245.known	chr19	+	914	2	FSM	ENSG00000187244.12	ENST00000588303.1	914	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCATAACAAGAGGAAAAGA	11	True	NA	NA	False	NA	NA	NA	44809114	44812046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44809207_44811224
transcript_101254.known	chr19	+	1709	10	FSM	ENSG00000130204.13	ENST00000405636.6	1709	10	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_1	355.671022917541	3187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGCCTCCGTTTTCT	-6	True	NA	22	True	AATATA	-17	NA	44891219	44903688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_10126.nic	chr1	+	1781	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.7546559363723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	NA	False	NA	8	True	AATAAA	-19	NA	59296721	59762724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_101266.known	chr19	+	2690	9	FSM	ENSG00000130202.10	ENST00000252483.10	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	1327	junction_5	598.679797554586	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTCTTGCCTTTTCTGT	-29	True	NA	41	True	NA	NA	NA	44846296	44889223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44882210_44882365_44885936_44886001_44886132_44886220_44888109
transcript_101270.known	chr19	+	3415	9	FSM	ENSG00000130204.13	ENST00000592434.5	3415	9	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_1	371.486877291783	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGAGGCCTCCGTTTT	5	True	NA	20	True	AATATA	-15	NA	44891230	44903686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207
transcript_101280.known	chr19	+	1768	9	FSM	ENSG00000130204.13	ENST00000426677.7	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	2328	junction_5	76.8602628150594	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGGCCTCCGTTTTCTC	-11	True	NA	23	True	AATATA	-18	NA	44891253	44903689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_1013.known	chr1	-	3305	15	FSM	ENSG00000107404.21	ENST00000378888.10	3305	15	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	24.9727402401507	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGTGTGGCCTGTGCCC	-20	True	NA	-3	True	AAAAAG	-18	NA	1349418	1335277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339286_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
transcript_101302.known	chr19	+	2112	6	FSM	ENSG00000130202.10	ENST00000252485.8	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	1204	junction_5	588.710658982832	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGTCTTGTAATACATC	NA	False	NA	27	True	AATAAA	-21	NA	44846174	44878941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44878222
transcript_10131.nic	chr1	+	1667	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	17.1484986490701	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	NA	False	NA	8	True	AATAAA	-19	NA	59296723	59762724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_101320.known	chr19	+	689	5	FSM	ENSG00000130208.10	ENST00000588750.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	860.592637372642	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCTCCTGAGTGCT	4894	False	NA	36	True	AATAAA	-11	NA	44914246	44919342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914490_44914671_44914734_44914871_44914950_44916189_44916326_44919172
transcript_101323.known	chr19	+	1166	4	FSM	ENSG00000130203.10	ENST00000252486.9	1166	4	0	0	0	0	multi-exon	FALSE	canonical	3	11010	junction_1	452.619290598868	28244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	1	True	NA	33	True	AATAAA	-21	NA	44905795	44909393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44905842_44906601_44906668_44907759_44907953_44908532
transcript_101328.known	chr19	+	864	4	FSM	ENSG00000130203.10	ENST00000434152.5	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	5528.55510559093	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGACCGCCTGGACGAGGT	17	False	NA	NA	False	NA	NA	NA	44905811	44909025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44905924_44906601_44906668_44907759_44907953_44908532
transcript_101333.known	chr19	+	553	4	FSM	ENSG00000130208.10	ENST00000588802.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	961.733157724463	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	0	True	NA	40	True	AATAAA	-15	NA	44914324	44919346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914490_44914871_44914950_44916189_44916326_44919172
transcript_101346.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_1	218.088666983561	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	6	True	NA	40	True	AATAAA	-15	NA	44914607	44919346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
transcript_101347.known	chr19	+	273	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	806.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	2	True	NA	37	True	AATAAA	-12	NA	44914709	44919343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914734_44914871_44914950_44919172
transcript_101355.known	chr19	+	2342	14	FSM	ENSG00000104853.16	ENST00000546079.5	2342	14	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	248.350606338376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGGGTGGGGCCGGGC	-2	True	NA	NA	False	NA	NA	NA	44954590	44993190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44954702_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_101356.known	chr19	+	2732	14	FSM	ENSG00000104853.16	ENST00000541297.6	2732	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.74503397322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCCGGGCCCCCCT	-2	True	NA	NA	False	NA	NA	NA	44954590	44993196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44955086_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_101365.known	chr19	+	2470	14	FSM	ENSG00000104853.16	ENST00000337392.10	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_6	51.2558266279416	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCCTCCTCCTCGT	-3	True	NA	34	True	AATAAA	-28	NA	44955379	44993341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_1014.known	chr1	-	2926	15	FSM	ENSG00000107404.21	ENST00000378891.9	2926	15	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_4	32.9576103750356	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGCCTGTGCCCCT	9434	False	NA	-1	True	AAAAAG	-20	NA	1349112	1335275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339361_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
transcript_101400.known	chr19	+	2258	12	FSM	ENSG00000104856.14	ENST00000221452.13	2258	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.1070435607946	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTTTCGTCTGTTCT	-14	True	NA	6	True	AATAAA	-17	NA	45001463	45038192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45001686_45002948_45002997_45009813_45009823_45011935_45012277_45022052_45022211_45025328_45025421_45025605_45025738_45028887_45028993_45032533_45032750_45034243_45034313_45034450_45034529_45037404
transcript_101406.known	chr19	+	2219	11	FSM	ENSG00000104856.14	ENST00000505236.1	2219	11	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_3	9.66436754267966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCTTCCCAATAAAGAT	-17	True	NA	-27	True	NA	NA	NA	45001460	45038159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45001686_45002948_45002997_45011935_45012277_45022052_45022211_45025328_45025421_45025605_45025738_45028887_45028993_45032533_45032750_45034243_45034313_45034450_45034529_45037404
transcript_10141.known	chr1	+	5713	22	FSM	ENSG00000134709.13	ENST00000371208.5	5713	22	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_19	19.8124997764616	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAGTTGTGAAATGAT	-17	True	NA	-45	True	AATAAA	-18	NA	59814948	59876322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314_59848517_59849072_59849184_59858427_59858516_59858984_59859046_59860187_59860329_59862783_59862878_59864631_59864667_59865162_59865246_59865871_59865973_59868249_59868352_59871041_59871111_59872794
transcript_101421.known	chr19	+	2213	21	FSM	ENSG00000104859.15	ENST00000391952.7	2213	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	31.7021686955325	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	4	True	NA	47	True	AATAAA	-26	NA	45039064	45070956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068059_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_101425.known	chr19	+	1941	20	FSM	ENSG00000104859.15	ENST00000391953.8	1941	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	38.8495214714359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGTGGGGAGGACAAGG	-15	True	NA	-54	True	NA	NA	NA	45039045	45070855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45039109_45040183_45040312_45052070_45052098_45053110_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_101430.nic	chr19	+	2347	20	NIC	ENSG00000104859.15	novel	2229	21	NA	NA	-5	0	intron_retention	TRUE	canonical	3	91	junction_14	24.658442391267	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTCAGTGTCATCT	-21	True	NA	45	True	AATAAA	-24	NA	45039039	45070954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_101439.nic	chr19	+	2712	19	NIC	ENSG00000104859.15	novel	2229	21	NA	NA	-5	0	intron_retention	FALSE	canonical	3	93	junction_11	23.7398451324683	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTCAGTGTCATCT	-21	True	NA	45	True	AATAAA	-24	NA	45039039	45070954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064631_45067336_45067595_45068014_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_101455.nic	chr19	+	2403	12	ISM	ENSG00000104859.15	ENST00000221455.8	2229	21	-5	5545	-5	1365	intron_retention	FALSE	canonical	3	93	junction_11	16.3444331767048	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCGTGGTGGCAC	-21	True	NA	NA	False	NA	NA	NA	45039039	45065411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011
transcript_10146.nic	chr1	+	1354	11	ISM	ENSG00000134709.13	ENST00000686716.1	3756	15	-162	13975	67	13124	5prime_fragment	FALSE	canonical	3	167	junction_4	15.7098695093244	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGCACGTACACA	191	False	NA	22	True	ATTAAA	-5	NA	59814852	59848474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314
transcript_10147.known	chr1	-	1879	9	FSM	ENSG00000134716.11	ENST00000371204.4	1879	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.97647022494766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTCCTTCCTGCTTC	-21	True	NA	1	True	CATAAA	-26	NA	59926773	59893307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_59893830_59900964_59901104_59904870_59905059_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_101470.known	chr19	+	599	2	FSM	ENSG00000104859.15	ENST00000588247.5	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCACGAGTTCGAGACC	13	True	NA	NA	False	NA	NA	NA	45039073	45040747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45039109_45040183
transcript_101473.known	chr19	+	5151	17	FSM	ENSG00000007047.16	ENST00000262891.9	5151	17	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_6	13.4466538588602	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACAGGTTCTGCATACC	-13	True	NA	NA	False	AGTAAA	-14	NA	45251270	45305284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45251640_45258988_45259190_45263112_45263167_45263318_45263368_45264683_45264750_45264839_45264911_45266224_45266282_45271471_45271709_45277922_45278043_45278515_45278616_45280373_45280484_45280574_45280735_45287446_45287665_45294348_45294453_45297675_45297955_45299810_45299856_45302373
transcript_101477.nnic	chr19	+	3065	12	NIC	ENSG00000104866.11	novel	2946	13	NA	NA	-212	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	10.2247471629109	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAACGTCTGCTTCGTGCG	-20	True	NA	14	True	AATAAA	-21	NA	45092961	45147285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45093528_45140235_45140282_45140505_45140607_45141321_45141442_45142060_45142212_45142302_45142459_45143520_45143634_45144853_45144996_45145093_45145261_45145352_45146050_45146389_45146481_45146570
transcript_10148.known	chr1	-	1667	8	FSM	ENSG00000134716.11	ENST00000466095.5	1667	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.34248118673448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCTATAGTGTGCCT	-9	True	NA	-11	True	CATAAA	-14	NA	59926761	59893319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_59893830_59900964_59901104_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_101483.known	chr19	+	576	3	FSM	ENSG00000142252.11	ENST00000591747.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGGCACTGTATCCCA	-9	True	NA	NA	False	CATAAA	-27	NA	45079257	45090537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45079280_45079906_45080030_45090106
transcript_101485.known	chr19	+	848	2	FSM	ENSG00000142252.11	ENST00000591607.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	3500	False	NA	-32	True	ATTAAA	-30	NA	45079194	45090869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45079280_45090106
transcript_101486.known	chr19	+	716	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATGCTCTACCTCAC	2	True	NA	NA	False	AGTAAA	-35	NA	45079268	45090713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45079378_45090106
transcript_101487.known	chr19	-	1634	3	FSM	ENSG00000170684.10	ENST00000303809.7	1634	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	4	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGTCTGGACTCTGGCT	-2	True	NA	-9	True	AGTAAA	-17	NA	45076478	45071499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45072581_45075712_45075863_45076075
transcript_101488.known	chr19	+	2946	13	FSM	ENSG00000104866.11	ENST00000221462.9	2946	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	5.6636021125154	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAACGTCTGCTTCGTGCG	6	True	NA	14	True	AATAAA	-21	NA	45093178	45147285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45093528_45138513_45138612_45140235_45140282_45140505_45140607_45141321_45141442_45142060_45142212_45142302_45142459_45143520_45143634_45144853_45144996_45145093_45145261_45145352_45146050_45146389_45146481_45146570
transcript_101489.known	chr19	-	805	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_5	167.378134772735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	3	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
transcript_10149.known	chr1	+	9229	11	FSM	ENSG00000162599.17	ENST00000403491.8	9229	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	4.1821047332653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCTGTGTCATCATTT	-30	True	NA	4	True	AATAAA	-16	NA	61082560	61462788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61082819_61088148_61088681_61277519_61277586_61332511_61332587_61352449_61352568_61359146_61359275_61383236_61383366_61404103_61404283_61406561_61406728_61426464_61426557_61455302
transcript_101490.known	chr19	-	758	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	177.73080768398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	3	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
transcript_101491.known	chr19	-	695	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	259.259522486639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	3	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
transcript_101492.known	chr19	-	3191	12	FSM	ENSG00000283632.4	ENST00000413988.3	3191	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	8.24721340366671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGCTGAGTCCTGAGT	0	True	NA	-2	True	AATAAA	-21	NA	45245407	45212369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45213358_45216072_45216195_45217527_45217684_45218196_45218320_45224777_45224914_45227661_45227773_45227973_45228075_45228164_45228267_45231762_45231875_45234192_45234827_45238522_45239062_45245340
transcript_101493.nnic	chr19	-	1128	4	NNC	ENSG00000283632.4	novel	3191	12	NA	NA	27255	-229	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	6.64997911442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGGGGAAACAGAGGCC	NA	False	NA	NA	False	NA	NA	NA	45218152	45212598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45213358_45216072_45216195_45217527_45217684_45218061
transcript_101494.nic	chr19	-	1483	4	ISM	ENSG00000283632.4	ENST00000413988.3	3191	12	26765	229	26765	-229	3prime_fragment	FALSE	canonical	2	11	junction_2	5.55777733351102	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGGGGAAACAGAGGCC	NA	False	NA	NA	False	NA	NA	NA	45218642	45212598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45213358_45216072_45216195_45217527_45217684_45218196
transcript_101497.known	chr19	+	2561	2	FSM	ENSG00000189114.8	ENST00000433642.3	2561	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGGTTAGTTCCTTT	7	True	NA	8	True	ATTAAA	-16	NA	45178783	45181800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45178832_45179287
transcript_101498.known	chr19	-	1556	8	FSM	ENSG00000104879.5	ENST00000221476.4	1556	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.57428457234194	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGCGATAGTTATTG	0	True	NA	0	True	AATAAA	-17	NA	45322875	45306412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45306929_45307460_45307651_45308408_45308533_45311748_45311921_45315464_45315598_45317824_45317980_45319520_45319732_45322820
transcript_101499.known	chr19	-	3110	24	FSM	ENSG00000104884.17	ENST00000682414.1	3110	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	37.8921961031536	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGGAGGATTTCTT	-15	True	NA	NA	False	GGGGCT	-30	NA	45370588	45350412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351031_45351467_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_101513.known	chr19	-	4108	23	FSM	ENSG00000104884.17	ENST00000391945.10	4108	23	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_22	17.778713244442	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	0	True	NA	-67	True	AATAAA	-16	NA	45370573	45349836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_10152.known	chr1	+	2683	10	FSM	ENSG00000162599.17	ENST00000371187.7	2683	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.2516899102651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCTAATGGTGCTTTTA	30	True	NA	NA	False	ATTAAA	-18	NA	61082620	61456394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61082819_61088148_61088681_61277519_61277586_61332511_61332587_61352449_61352568_61359146_61359275_61383236_61383366_61404103_61404283_61406561_61406728_61455302
transcript_101532.known	chr19	-	2853	22	FSM	ENSG00000104884.17	ENST00000391944.8	2853	22	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_21	17.929946826393	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGTCTTGCCTGGCC	-15	True	NA	-8	True	CATAAA	-14	NA	45370588	45351593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_101533.known	chr19	-	4013	22	FSM	ENSG00000104884.17	ENST00000684407.1	4013	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	39.2337029441782	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCACCTGTGCCTG	-15	True	NA	-77	True	AATAAA	-6	NA	45370588	45349846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370535
transcript_101535.known	chr19	-	3989	22	FSM	ENSG00000104884.17	ENST00000684218.1	3989	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	39.7375745350918	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCACCTGTGCCTG	-15	True	NA	-77	True	AATAAA	-6	NA	45370588	45349846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_10157.known	chr1	-	1250	7	FSM	ENSG00000162604.12	ENST00000294613.9	1250	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	100.03943666819	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAGTGCTTTGTTATT	39	False	NA	-7	True	AATAAA	-17	NA	61725423	61681046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723785_61724954
transcript_101597.known	chr19	+	1764	13	FSM	ENSG00000104892.17	ENST00000585434.5	1764	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	14.928300863349	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATGTCACCTGACT	-6	True	NA	9	True	ATTAAA	-17	NA	45340760	45351515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45340847_45345533_45345800_45346543_45346775_45347449_45347517_45347940_45348161_45348645_45348734_45348819_45348922_45349428_45349603_45350340_45350432_45350513_45350552_45350640_45350748_45350953_45351018_45351285
transcript_101607.nic	chr19	-	2995	11	ISM	ENSG00000104884.17	ENST00000391944.8	2853	22	-12	10332	-8	2060	5prime_fragment	FALSE	canonical	3	121	junction_10	22.0952483579615	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCACTTAGGAGGTCGT	NA	False	NA	NA	False	AAAAAG	-14	NA	45370600	45361925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_101625.known	chr19	-	557	7	FSM	ENSG00000104884.17	ENST00000591309.5	557	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	64.9548988829087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGACGCCCACCTGGCC	16	True	NA	NA	False	GGGGCT	-24	NA	45370557	45364036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45364120_45364234_45364332_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_101630.known	chr19	-	3131	13	FSM	ENSG00000104881.16	ENST00000360957.10	3131	13	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_12	22.5590275105604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	6	True	NA	-4	True	AATAAA	-18	NA	45405069	45379637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879_45392341_45395435_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45404998
transcript_101631.known	chr19	-	3118	13	FSM	ENSG00000104881.16	ENST00000418234.6	3118	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	22.0924509479797	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	2	True	NA	-4	True	AATAAA	-18	NA	45406349	45379637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879_45392341_45395435_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45406291
transcript_101634.known	chr19	-	2176	7	FSM	ENSG00000104881.16	ENST00000585905.1	2176	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	2.29128784747792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	42	False	NA	NA	False	NA	NA	NA	45406309	45394652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45406291
transcript_10164.known	chr1	+	5448	35	FSM	ENSG00000132849.22	ENST00000484562.5	5448	35	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	8.30933106206282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAGAAAGATG	12	True	NA	NA	False	ATTAAA	-13	NA	61742476	62114925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052
transcript_101644.known	chr19	-	3379	10	FSM	ENSG00000012061.16	ENST00000300853.8	3379	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_9	88.6012011177398	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-18	True	NA	-7	True	AATAAA	-19	NA	45423917	45407333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_101645.known	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	100.162090854996	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	14	True	NA	-62	True	NA	NA	NA	45424367	45409667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_101649.nic	chr19	-	3438	9	ISM	ENSG00000012061.16	ENST00000300853.8	3379	10	340	0	-11	0	3prime_fragment	FALSE	canonical	3	253	junction_1	77.8873385089001	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	804	False	NA	-7	True	AATAAA	-19	NA	45423577	45407333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_101652.known	chr19	-	949	9	FSM	ENSG00000012061.16	ENST00000340192.11	949	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	127.644770750705	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	13	True	NA	-8	True	AATAAA	-22	NA	45423839	45409613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_101654.nic	chr19	-	1156	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	790	-52	-11	0	3prime_fragment	FALSE	canonical	3	253	junction_1	77.8873385089001	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	804	False	NA	-10	True	AATAAA	-20	NA	45423577	45409615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_101658.nic	chr19	-	1423	9	NIC	ENSG00000012061.16	novel	1453	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_2	135.794824551601	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	24	False	NA	-10	True	AATAAA	-20	NA	45424357	45409615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_10166.nic	chr1	+	3730	26	ISM	ENSG00000132849.22	ENST00000635214.1	4863	36	-47	199587	-47	39132	5prime_fragment	FALSE	canonical	3	59	junction_5	7.05362318245028	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTTGAACCTCTCAAG	-35	True	NA	NA	False	AAGAAA	-11	NA	61742429	61914663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586
transcript_101666.nic	chr19	-	3366	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	262	-2280	-11	0	3prime_fragment	FALSE	canonical	3	63	junction_2	127.591343830246	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	804	False	NA	-7	True	AATAAA	-19	NA	45423577	45407333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_101671.nic	chr19	-	1084	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	262	2	-11	0	3prime_fragment	FALSE	canonical	3	63	junction_2	127.591343830246	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	804	False	NA	-10	True	AATAAA	-20	NA	45423577	45409615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_101675.known	chr19	-	1278	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	75.338691038184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-39	True	NA	1	True	AATAAA	-17	NA	45423566	45413433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_101687.known	chr19	-	836	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	160.481276166411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGCTGGCTGCGCTG	26	True	NA	-13	True	AATAAA	-17	NA	45423501	45409618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_10169.nic	chr1	+	2011	11	ISM	ENSG00000132849.22	ENST00000646453.1	5234	18	-255	46555	-255	0	5prime_fragment	FALSE	canonical	3	6	junction_1	24.5242736895509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTAGATTTTTCTCTC	NA	False	NA	18	True	AATAAA	-27	NA	61951797	62117395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
transcript_101691.known	chr19	+	1830	3	FSM	ENSG00000117877.11	ENST00000589804.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	90	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGGGGTTTTGGTT	21	False	NA	13	True	ATTAAA	-21	NA	45406690	45409786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45406725_45407093_45407236_45408132
transcript_101702.known	chr19	+	3774	3	FSM	ENSG00000125740.14	ENST00000586615.5	3774	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCAGGCTACAGTGTTT	44	False	NA	NA	False	AATAAA	-18	NA	45469912	45475179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45470950_45471193_45471302_45472550
transcript_101703.known	chr19	+	2182	1	FSM	ENSG00000125740.14	ENST00000586113.1	2182	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAATTAGTT	17	False	NA	NA	False	NA	NA	NA	45469885	45472067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45469900_45472100
transcript_101704.known	chr19	+	1061	2	FSM	ENSG00000117877.11	ENST00000592852.1	1061	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCAGCTGAAAGAACC	14	False	NA	NA	False	AAGAAA	-4	NA	45406661	45408619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45407236_45408132
transcript_101706.known	chr19	-	2274	11	FSM	ENSG00000125744.12	ENST00000245923.9	2274	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	34.3949124144836	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-24	True	NA	-4	True	AATAAA	-16	NA	45497047	45485293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159_45493379_45494165_45494421_45494525_45495006_45495094_45495140_45496791
transcript_101708.known	chr19	-	2357	11	FSM	ENSG00000125744.12	ENST00000590526.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	44.2227317111913	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	255	False	NA	-4	True	AATAAA	-16	NA	45497055	45485293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159_45493379_45494165_45494421_45494525_45495006_45495094_45495215_45496791
transcript_101712.known	chr19	-	2111	10	FSM	ENSG00000125744.12	ENST00000591286.5	2111	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	39.4107837595652	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	255	False	NA	-4	True	AATAAA	-16	NA	45497055	45485293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494117_45494421_45494525_45495006_45495094_45495140_45496791
transcript_101714.known	chr19	-	2063	10	FSM	ENSG00000125744.12	ENST00000344680.8	2063	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	22.5684145064143	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	255	False	NA	-4	True	AATAAA	-16	NA	45497055	45485293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45496791
transcript_101715.nnic	chr19	-	2470	10	NNC	ENSG00000125744.12	novel	2063	10	NA	NA	-2356	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	41.2795348811006	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	8095	False	NA	-4	True	AATAAA	-16	NA	45499411	45485293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45498740
transcript_101716.nic	chr19	-	2106	10	NIC	ENSG00000125744.12	novel	2357	11	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	39.1779731513374	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	0	True	NA	-4	True	AATAAA	-16	NA	45497023	45485293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495215_45496791
transcript_101722.known	chr19	-	546	6	FSM	ENSG00000125744.12	ENST00000588036.5	546	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	53.1827039553274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTCCCACCCACCCCCCT	-2	True	NA	NA	False	NA	NA	NA	45493238	45485637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45493159
transcript_101723.known	chr19	+	1751	5	FSM	ENSG00000213889.11	ENST00000451287.7	1751	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	43.8940485715319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	-13	True	NA	57	True	AATACA	-19	NA	45498442	45502513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45499412_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_101724.known	chr19	+	895	5	FSM	ENSG00000213889.11	ENST00000396735.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	28.8227340826647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	928	False	NA	54	True	ATTAAA	-45	NA	45499609	45502510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45499726_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_101725.known	chr19	+	1953	4	FSM	ENSG00000213889.11	ENST00000415077.1	1953	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	4.32049379893857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACCAAATGTTTTTGAA	151	False	NA	NA	False	AAAAAG	-44	NA	45498606	45502342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45500067_45500455_45500562_45500649_45500711_45502016
transcript_101737.known	chr19	-	1127	7	FSM	ENSG00000125744.12	ENST00000430715.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	25.8698666405531	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	4043	False	NA	-4	True	AATAAA	-16	NA	45493267	45485293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159
transcript_101738.known	chr19	+	548	4	FSM	ENSG00000213889.11	ENST00000401593.5	548	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	53.2749680640188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	145	False	NA	NA	False	AAAAAG	-19	NA	45499948	45502310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45500067_45500455_45500562_45500680_45500711_45502016
transcript_101776.known	chr19	+	2242	13	FSM	ENSG00000125753.14	ENST00000245932.11	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	671	junction_6	88.183008882412	4753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	12	True	NA	13	True	AATAAA	-19	NA	45507478	45526983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_101813.known	chr19	+	1725	11	FSM	ENSG00000125753.14	ENST00000586014.5	1725	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	264.516615735193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGCCCCTGCAGAAT	39	True	NA	-28	True	NA	NA	NA	45507505	45526942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45507777_45517662_45517835_45517928_45517964_45522522_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_10184.known	chr1	+	3831	4	FSM	ENSG00000240563.2	ENST00000498273.2	3831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_1	54.2913948573395	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATACTGTTTGCTTA	-12	True	NA	26	True	ATTAAA	-16	NA	62194848	62212328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782
transcript_101852.nnic	chr19	-	1806	3	NNC	ENSG00000125741.5	novel	7811	2	NA	NA	-22	-2875	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATCTTCAAGTTGATG	7550	False	NA	-13	True	AATAAA	-15	NA	45584864	45549155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45549643_45552834_45553912_45584622
transcript_101857.known	chr19	-	2250	2	FSM	ENSG00000125741.5	ENST00000323060.3	2250	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	7572	False	NA	NA	False	NA	NA	NA	45584842	45527426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45529457_45584622
transcript_101858.known	chr19	-	7811	2	FSM	ENSG00000125741.5	ENST00000263275.5	7811	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCAGCCCGGTTTAAT	-13	True	NA	NA	False	ATTAAA	-14	NA	45584802	45546280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45553912_45584622
transcript_101865.known	chr19	-	2791	22	FSM	ENSG00000125746.18	ENST00000536630.5	2791	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	20.4251856446099	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTCAGGGTCTATG	-13	True	NA	23	True	AATAAA	-13	NA	45643727	45609401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45643578
transcript_101866.known	chr19	-	2974	22	FSM	ENSG00000125746.18	ENST00000587152.6	2974	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_21	21.5902892423691	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-13	True	NA	25	True	AATAAA	-15	NA	45645602	45609399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45645272
transcript_101878.nic	chr19	-	2256	19	NIC	ENSG00000125746.18	novel	2791	22	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	20.0346151065883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTCAGGGTCTATG	6318	False	NA	23	True	AATAAA	-13	NA	45639271	45609401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639206
transcript_101880.known	chr19	-	2234	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_18	18.8863560393329	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	2	True	NA	25	True	AATAAA	-15	NA	45639397	45609399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_101887.known	chr19	-	2062	17	FSM	ENSG00000125746.18	ENST00000588308.5	2062	17	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	25.6998905639693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	8	True	NA	25	True	AATAAA	-15	NA	45639391	45609399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616764_45616854_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_101890.known	chr19	+	886	3	FSM	ENSG00000267757.4	ENST00000623430.1	886	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGCGTG	48	False	NA	NA	False	AATAAA	-35	NA	45641690	45642840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45641767_45641878_45642073_45642224
transcript_101894.known	chr19	-	2362	1	FSM	ENSG00000125746.18	ENST00000588420.1	2362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAAAGAGA	2811	False	NA	NA	False	AAAACA	-9	NA	45642778	45640416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45640400_45642800
transcript_101906.known	chr19	-	615	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	3932.58543737097	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	0	True	NA	-20	True	AATAAA	-16	NA	45691941	45687462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
transcript_101909.known	chr19	-	702	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	3697.11151516364	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	601	False	NA	-20	True	AATAAA	-16	NA	45692316	45687462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
transcript_101911.known	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	6943	junction_2	785	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-12	True	NA	-17	True	AATAAA	-19	NA	45691953	45687459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45691886
transcript_101912.known	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4005.0528918688	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	1	True	NA	-19	True	AATAAA	-17	NA	45691940	45687461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
transcript_101913.known	chr19	-	379	3	FSM	ENSG00000125743.11	ENST00000585392.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	4253.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	24	True	NA	-17	True	AATAAA	-19	NA	45691917	45687459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688467_45691886
transcript_101918.nnic	chr19	-	3437	3	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	10.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCAGACTGGTTT	-31	True	NA	-10	True	TATAAA	-15	NA	45730927	45710628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45713574_45723472_45723886_45730848
transcript_101920.known	chr19	-	2993	2	FSM	ENSG00000177051.6	ENST00000317683.4	2993	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCAGACTGGTTT	0	True	NA	-10	True	TATAAA	-15	NA	45730896	45710628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45713574_45730848
transcript_101921.nnic	chr19	-	435	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-31	-10074	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTGCCCAGCTTTGA	-31	True	NA	NA	False	AATAAA	-9	NA	45730927	45723529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45723886_45730848
transcript_101923.known	chr19	-	2548	15	FSM	ENSG00000104936.20	ENST00000458663.6	2548	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	21.6338972495499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCCCAACAACCCCAATC	4383	False	NA	NA	False	NA	NA	NA	45782388	45769846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777341_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192
transcript_101925.known	chr19	-	2754	15	FSM	ENSG00000104936.20	ENST00000447742.6	2754	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	19.3555613481511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCCATCTGCCCAAAG	4292	False	NA	-28	True	AATAAA	-2	NA	45782479	45769735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777341_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192
transcript_101927.known	chr19	-	3104	14	FSM	ENSG00000104936.20	ENST00000682259.1	3104	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	17.1125753960761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGTCCCCACCTAG	6226	False	NA	-78	True	NA	NA	NA	45780545	45769785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777
transcript_101930.known	chr19	-	3227	14	FSM	ENSG00000104936.20	ENST00000600757.6	3227	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	12.9820084878534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAAAGCTCTGGACTCC	6168	False	NA	-17	True	AATAAA	-13	NA	45780603	45769724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777
transcript_101934.known	chr19	-	2499	13	FSM	ENSG00000104936.20	ENST00000596686.5	2499	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	17.787323825941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTGGACTCCACAGT	7152	False	NA	-12	True	AATAAA	-18	NA	45779619	45769719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438
transcript_101936.nic	chr19	-	2524	13	ISM	ENSG00000104936.20	ENST00000682335.1	3243	14	966	8	-18	0	3prime_fragment	TRUE	canonical	3	47	junction_2	13.4257215820976	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGACTCCACAGTGTC	7134	False	NA	-9	True	AATAAA	-21	NA	45779637	45769716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438
transcript_101938.known	chr19	-	2960	13	FSM	ENSG00000104936.20	ENST00000684672.1	2960	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	28.0786346217586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGCTCTGGACTCCACA	6226	False	NA	-14	True	AATAAA	-16	NA	45780545	45769721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771061_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777341_45777591_45777666_45777724_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777
transcript_101953.nic	chr19	-	2702	4	NIC	ENSG00000177045.11	novel	3344	3	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_3	31.8468557666565	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	42	True	NA	-7	True	AATAAA	-21	NA	45769212	45764784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45766112_45766349_45767156_45768041_45768113_45768714
transcript_101956.nnic	chr19	-	2419	3	NNC	ENSG00000177045.11	novel	3344	3	NA	NA	1108	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	40.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	2594	False	NA	-7	True	AATAAA	-21	NA	45767519	45764784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45766112_45766349_45767156_45767233
transcript_101957.known	chr19	-	3344	3	FSM	ENSG00000177045.11	ENST00000317578.7	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	2	True	NA	-7	True	AATAAA	-21	NA	45769252	45764784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45766112_45766349_45767156_45768041
transcript_101960.nnic	chr19	+	1157	2	NNC	ENSG00000259605.3	novel	1402	2	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGTCTCAGTGCATCCAA	8	True	NA	3	True	AATAAA	-14	NA	45768365	45769800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_45768837_45769114
transcript_101961.known	chr19	+	1420	1	FSM	ENSG00000259605.3	ENST00000592217.2	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTGCATCCAAAACGTG	29	False	NA	9	True	AATAAA	-20	NA	45768386	45769806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45768400_45769800
transcript_101965.known	chr19	-	4077	27	FSM	ENSG00000125755.19	ENST00000245934.12	4077	27	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_18	39.3996365585616	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGCGCGGGTGCCGTCTC	6	True	NA	32	True	AAAAAG	-13	NA	45863147	45815409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_101966.nic	chr19	-	4157	27	NIC	ENSG00000125755.19	novel	4077	27	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_26	69.6702822217053	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGGATGGCGGGCCTG	-14	True	NA	14	True	AATAAA	-37	NA	45863167	45815427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854586_45863057
transcript_101994.known	chr19	-	1899	12	FSM	ENSG00000125755.19	ENST00000598896.5	1899	12	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	19.7383714066061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTTATGTCTAAAAT	66	False	NA	NA	False	NA	NA	NA	45863132	45831169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_101997.known	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	71.4345076898336	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	NA	False	NA	12	True	AAAAAG	-4	NA	45817133	45815467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
transcript_102.known	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_4600_4800
transcript_1020.known	chr1	-	2293	10	FSM	ENSG00000162576.17	ENST00000309212.11	2293	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	13.8483853852273	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCCCAGGTATGCTT	-9	True	NA	-13	True	AATAAA	-19	NA	1358555	1352690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1355449_1355753_1356680_1356705_1358455
transcript_10200.nic	chr1	+	777	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-145	5345	-145	-5345	5prime_fragment	FALSE	canonical	3	1730	junction_1	66	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAGGAGAAAACTCTAAA	-9	True	NA	NA	False	AAAACA	-17	NA	62194703	62206983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_102001.known	chr19	+	1923	2	FSM	ENSG00000170608.3	ENST00000302177.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTCTCTTTTCCTTG	-1	True	NA	33	True	ATTAAA	-21	NA	45864325	45873797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45864526_45872074
transcript_102002.known	chr19	-	2534	1	FSM	ENSG00000170604.5	ENST00000302165.5	2534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTCCCTTAGTTGT	7	True	NA	-7	True	AATAAA	-24	NA	45886141	45883607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45883600_45886100
transcript_102003.known	chr19	-	1896	3	FSM	ENSG00000176182.6	ENST00000322217.6	1896	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGAGGCTCTGTCTGA	2	True	NA	NA	False	AATAAA	-17	NA	45902613	45890022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45891324_45901274_45901826_45902569
transcript_102006.known	chr19	+	1817	14	FSM	ENSG00000104983.8	ENST00000595358.5	1817	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.3776855910835	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTCAGCTTATGACTAAA	5	True	NA	15	True	AATAAA	-18	NA	45995466	46018616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45995505_46003007_46003167_46003418_46003502_46006558_46006717_46008139_46008302_46015048_46015260_46015344_46015428_46016053_46016224_46016317_46016394_46016693_46016834_46016990_46017070_46017246_46017305_46018077_46018151_46018289
transcript_102007.nnic	chr19	+	1870	14	NNC	ENSG00000104983.8	novel	1817	14	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.0833324432672	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTCAGCTTATGACTAA	NA	False	NA	14	True	AATAAA	-17	NA	45995437	46018615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_45995505_46002982_46003167_46003418_46003502_46006558_46006717_46008139_46008302_46015048_46015260_46015344_46015428_46016053_46016224_46016317_46016394_46016693_46016834_46016990_46017070_46017246_46017305_46018077_46018151_46018289
transcript_10201.nic	chr1	+	1053	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-145	5069	-145	-5069	5prime_fragment	FALSE	canonical	3	1730	junction_1	66	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAGAGGAAAGAAAATTT	-9	True	NA	-20	True	AAGAAA	-1	NA	62194703	62207259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_102012.nnic	chr19	+	1684	13	NIC	ENSG00000104983.8	novel	1817	14	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	24.3647058034545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTCAGCTTATGACTAA	NA	False	NA	14	True	AATAAA	-17	NA	45995436	46018615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45995505_46003007_46003167_46003418_46003502_46006558_46006717_46015048_46015260_46015344_46015428_46016053_46016224_46016317_46016394_46016693_46016834_46016990_46017070_46017246_46017305_46018077_46018151_46018289
transcript_102018.known	chr19	-	708	3	FSM	ENSG00000008438.5	ENST00000008938.5	708	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCCTCAGCAGGTCCC	-1	True	NA	NA	False	AATAAA	-15	NA	46023053	46019152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46019420_46019525_46019648_46022734
transcript_10202.nic	chr1	+	1381	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-145	4741	-145	-4741	5prime_fragment	FALSE	canonical	3	1730	junction_1	66	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAATAAATCAAGGAG	-9	True	NA	NA	False	NA	NA	NA	62194703	62207587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_102025.nic	chr19	+	2433	15	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	-48	0	combination_of_known_junctions	TRUE	canonical	3	42	junction_11	50.5298456966024	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	46296993	46338538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329080_46329479_46331155_46331274_46334904_46334987_46338226
transcript_102030.nic	chr19	+	2307	15	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_14	37.2323783822629	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	46296993	46338538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
transcript_102031.known	chr19	+	5856	15	FSM	ENSG00000124440.16	ENST00000377670.9	5856	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_14	32.6921322370396	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTGTTGACTCATC	-10	True	NA	16	True	CATAAA	-25	NA	46297041	46343433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
transcript_10205.known	chr1	+	3602	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	24.9899979991996	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGTGTATATATATA	-27	True	NA	86	True	TATAAA	-26	NA	62437048	62451804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_102064.nic	chr19	+	2161	14	NIC	ENSG00000124440.16	novel	2101	13	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_13	44.5172661138184	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	46296993	46338538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
transcript_102066.nic	chr19	+	2366	14	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	-48	-59	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	40.5853618640161	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTGTATTATTATTT	NA	False	NA	25	True	NA	NA	NA	46296993	46340041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
transcript_102075.known	chr19	+	2101	13	FSM	ENSG00000124440.16	ENST00000244302.8	2101	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	26.2900488144596	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	55	True	NA	NA	NA	46297045	46331513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155
transcript_10210.known	chr1	+	3507	9	FSM	ENSG00000162607.13	ENST00000371146.5	3507	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	95.0259832887827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	NA	False	NA	84	True	TATAAA	-24	NA	62436303	62451802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_102108.known	chr19	+	2004	7	FSM	ENSG00000124440.16	ENST00000475432.6	2004	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	26.6546848081575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATCCCAGAACTTTGGG	-6	True	NA	NA	False	TTTAAA	-21	NA	46297045	46313363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160
transcript_102113.known	chr19	+	2101	13	FSM	ENSG00000124440.16	ENST00000600383.1	2101	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_12	46.2933730558585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	210	False	NA	NA	False	AATAAA	-13	NA	46303848	46338538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
transcript_102114.known	chr19	+	1886	14	FSM	ENSG00000011485.15	ENST00000478046.5	1886	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	326.926588216438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGTATTTCTTTAAT	16	True	NA	NA	False	NA	NA	NA	46347100	46392981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46391150_46391259_46392636
transcript_102116.known	chr19	+	2139	13	FSM	ENSG00000011485.15	ENST00000012443.9	2139	13	0	0	0	0	multi-exon	TRUE	canonical	3	798	junction_4	56.8804789790741	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAAGTGGCCTCTGCCTC	2	True	NA	NA	False	NA	NA	NA	46347086	46390975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_102124.known	chr19	+	1929	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	263.369457368124	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	23	False	NA	22	True	AATAAA	-18	NA	46347107	46390852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_10213.nic	chr1	+	1555	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-460	6950	285	1534	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAGAATTACCTACTA	204	False	NA	NA	False	AGTAAA	-4	NA	62436588	62444854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_102131.known	chr19	-	3236	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCCTGTGTGGCTCTG	7	True	NA	-5	True	AAAACA	-42	NA	46413564	46410328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46410300_46413600
transcript_102132.known	chr19	-	3335	3	FSM	ENSG00000182013.18	ENST00000438932.2	3335	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGTAGGTGAGGATT	1294	False	NA	-1	True	AATAAA	-27	NA	46471407	46466490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46468578_46469937_46471115_46471336
transcript_102134.known	chr19	-	3684	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	8	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGTTAAGTCTCTTG	-37	True	NA	-13	True	AATAAA	-15	NA	46471563	46466502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46468578_46469732_46471115_46471336
transcript_102137.known	chr19	+	880	7	FSM	ENSG00000160014.17	ENST00000602169.2	880	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	2327.62854997671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCATGATTGCTCTTT	10	True	NA	25	True	GATAAA	-20	NA	46601346	46609303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46605993_46606186_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_10214.nic	chr1	+	1679	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-460	6826	285	1658	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATGGGAAAAGAAAAAG	204	False	NA	13	True	TTTAAA	-16	NA	62436588	62444978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_102140.known	chr19	+	702	6	FSM	ENSG00000160014.17	ENST00000391918.6	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2011.77298918143	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	NA	False	NA	27	True	GATAAA	-22	NA	46601073	46609305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601177_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_102144.known	chr19	+	540	6	FSM	ENSG00000160014.17	ENST00000594523.5	540	6	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_2	1986.11584757788	3224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGATCTCTCTCTTCT	29	True	NA	-96	True	NA	NA	NA	46601365	46609182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46608204_46608341_46608481_46608589_46608845_46608982_46609124
transcript_10215.nic	chr1	+	1581	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-311	6775	-311	1709	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAATTATCCAAGGAACA	0	True	NA	64	True	AAAAAG	-32	NA	62436737	62445029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_102151.known	chr19	+	1203	6	FSM	ENSG00000160014.17	ENST00000596362.1	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1967.7311808273	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACTGACAGTGGGCAAC	16	False	NA	NA	False	NA	NA	NA	46602071	46609770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46602211_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_102157.known	chr19	+	927	5	FSM	ENSG00000160014.17	ENST00000597868.5	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	4576	junction_4	283.943986553686	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	30	True	NA	27	True	GATAAA	-22	NA	46601366	46609305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46608196_46608341_46608481_46608982_46609124
transcript_102162.known	chr19	+	561	5	FSM	ENSG00000160014.17	ENST00000598871.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2136.85462479318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTCTCGCGCGCG	-7	True	NA	-88	True	NA	NA	NA	46601329	46609190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_102169.known	chr19	+	696	6	FSM	ENSG00000160014.17	ENST00000477244.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_2	1811.10887579957	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGATAAAGCAACAAAAGA	-28	True	NA	-3	True	NA	NA	NA	46601308	46609275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46608198_46608341_46608481_46608589_46608845_46608982_46609124
transcript_102170.known	chr19	-	2078	3	FSM	ENSG00000160013.9	ENST00000291294.7	2078	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTTATGTGTCCTTA	-7	True	NA	NA	False	AATAAA	-25	NA	46625089	46620467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46621673_46623457_46624238_46624996
transcript_102172.known	chr19	-	3321	19	FSM	ENSG00000105287.13	ENST00000433867.5	3321	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_18	48.805136594673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGGCACTCTCGAATCAT	-16	True	NA	-8	True	ATTAAA	-38	NA	46717127	46674316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130_46716536_46716814
transcript_102173.known	chr19	-	3588	18	FSM	ENSG00000105287.13	ENST00000291281.9	3588	18	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_17	35.0648435415753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCACTCTCGAATCATT	-3	True	NA	-7	True	ATTAAA	-39	NA	46717114	46674315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130
transcript_102182.known	chr19	-	1682	10	FSM	ENSG00000105287.13	ENST00000597589.5	1682	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	21.4775219850262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGCCCCATGGCCTT	1	True	NA	-37	True	ATTAAA	-9	NA	46697341	46674345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156
transcript_102188.known	chr19	-	2608	19	FSM	ENSG00000090372.15	ENST00000539396.5	2608	19	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_18	195.116489422202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGACTCCAGAAGGTGCC	107	False	NA	NA	False	NA	NA	NA	46746994	46720070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727547_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148_46746212_46746763
transcript_10219.nic	chr1	+	1192	5	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-363	8634	-363	-150	5prime_fragment	FALSE	canonical	3	276	junction_2	24.7285260377565	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCTTTGGCAAGTTA	-5	True	NA	NA	False	CATAAA	-44	NA	62436685	62443170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158
transcript_102194.known	chr19	-	3176	18	FSM	ENSG00000090372.15	ENST00000263280.11	3176	18	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_10	80.3036624363549	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACGGTGCCATCT	-5	True	NA	-7	True	AATAAA	-14	NA	46746450	46719510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727547_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148
transcript_102198.known	chr19	-	3628	18	FSM	ENSG00000090372.15	ENST00000391910.7	3628	18	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_10	172.280028745349	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACGGTGCCATCT	220	False	NA	-7	True	AATAAA	-14	NA	46746881	46719510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727568_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148
transcript_10223.nic	chr1	+	1146	4	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-305	9481	-305	743	5prime_fragment	FALSE	canonical	3	276	junction_2	24.0878023535196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGTAAAAAGCAAAAGTA	-12	True	NA	NA	False	AATAAA	-11	NA	62436743	62442323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194
transcript_102246.known	chr19	-	2882	8	FSM	ENSG00000105281.12	ENST00000542575.6	2882	8	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_7	92.0651942918712	8089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTTCTTGAGAATTT	0	True	NA	-5	True	AATAAA	-21	NA	46788594	46774882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787399
transcript_10225.nic	chr1	+	973	2	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-460	11845	285	-1621	5prime_fragment	FALSE	canonical	3	331	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTAAGAGAGCTTTGG	204	False	NA	NA	False	AAGAAA	-33	NA	62436588	62439959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798
transcript_10227.known	chr1	-	6731	49	FSM	ENSG00000116641.18	ENST00000340370.10	6731	49	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_17	34.7168044384368	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACCGAGTGGGACTT	278	False	NA	-6	True	ATTAAA	-19	NA	62688264	62455012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477826_62487397_62487413_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513443_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_10228.known	chr1	-	6297	48	FSM	ENSG00000116641.18	ENST00000635123.1	6297	48	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	20.842182216102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAATGCACTTGTTTTAT	278	False	NA	NA	False	NA	NA	NA	62688264	62455413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477835_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513470_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_102281.known	chr19	-	1750	8	FSM	ENSG00000105281.12	ENST00000412532.6	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	341.178150842408	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTTTTTAGCAATAA	1252	False	NA	-5	True	NA	NA	NA	46787342	46774923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787238
transcript_102298.known	chr19	-	1872	7	FSM	ENSG00000105281.12	ENST00000434726.6	1872	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	373.796624739532	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	-43	True	NA	-7	True	AATAAA	-19	NA	46784824	46774884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784594
transcript_1023.known	chr1	-	2001	10	FSM	ENSG00000162576.17	ENST00000445648.5	2001	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.0600539022216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGTCCCAGGTATGCT	3	True	NA	-14	True	AATAAA	-18	NA	1358543	1352691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1353333_1353847_1353947_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1355449_1355753_1356680_1356705_1358455
transcript_102312.known	chr19	+	583	5	FSM	ENSG00000181027.11	ENST00000595570.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.7533330370897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCCCGAGCTGGTAGAC	2	True	NA	NA	False	NA	NA	NA	46746053	46755634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46748514_46748666_46748774_46748885_46755411
transcript_102314.known	chr19	+	597	5	FSM	ENSG00000181027.11	ENST00000600629.5	597	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.5499445675594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCAGCCGACACGCTCCC	6	True	NA	NA	False	NA	NA	NA	46746057	46755690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46747233_46747306_46748026_46748089_46748514_46748666_46755411
transcript_102317.known	chr19	+	3411	4	FSM	ENSG00000181027.11	ENST00000318584.10	3411	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.6487105081727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGTTAAAAAAAAAAAAAAAA	5	True	NA	103	True	NA	NA	NA	46746056	46758575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46748514_46748666_46755411
transcript_102320.known	chr19	+	2801	4	FSM	ENSG00000181027.11	ENST00000391909.7	2801	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	20.0720922897661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAGAACCGAC	5	True	NA	NA	False	NA	NA	NA	46746056	46757913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46748514_46748718_46755411
transcript_102322.known	chr19	+	592	4	FSM	ENSG00000181027.11	ENST00000598271.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	13.1993265821489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTAGGAATTCCCGGGC	5	True	NA	NA	False	NA	NA	NA	46746056	46755537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46748514_46748885_46755411
transcript_102323.known	chr19	+	548	4	FSM	ENSG00000181027.11	ENST00000600005.5	548	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.80656320908194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCGCCCGGAGACCTACGT	6	True	NA	NA	False	NA	NA	NA	46746057	46755792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46747233_46747306_46748026_46748089_46755411
transcript_102326.known	chr19	+	633	3	FSM	ENSG00000181027.11	ENST00000601299.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCTGCCAGGTGCCTG	-6	True	NA	NA	False	NA	NA	NA	46746045	46755937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46755411
transcript_102328.known	chr19	-	2031	7	FSM	ENSG00000105281.12	ENST00000594991.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_3	74.254068350944	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	3689	False	NA	-7	True	AATAAA	-19	NA	46784905	46774884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516
transcript_102331.known	chr19	-	898	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	810.213243535305	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-10	True	NA	-5	True	AATAAA	-28	NA	46850316	46838157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
transcript_102332.known	chr19	-	829	5	FSM	ENSG00000042753.12	ENST00000599990.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	885.091909069335	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	9142	False	NA	-5	True	AATAAA	-28	NA	46850769	46838157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850655
transcript_102333.known	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	302.386342284171	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	4	True	NA	-14	True	AATAAA	-19	NA	46850846	46838166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
transcript_102336.known	chr19	-	793	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	862.019540091754	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	9134	False	NA	17	True	NA	NA	NA	46850777	46838135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
transcript_102337.known	chr19	-	636	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	942.575549580333	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	16	True	NA	-5	True	AATAAA	-28	NA	46850834	46838157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
transcript_102339.known	chr19	-	315	4	FSM	ENSG00000042753.12	ENST00000601649.1	315	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	877.512139833721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGGCGAGCCCCACCCC	9145	False	NA	NA	False	NA	NA	NA	46850766	46838446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46845992_46846143_46850763
transcript_10234.known	chr1	-	122	2	FSM	ENSG00000116641.18	ENST00000636635.1	122	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCACCTTCGGTGTGCA	74	True	NA	NA	False	AATGAA	-16	NA	62688282	62687590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_62687657_62688226
transcript_102341.known	chr19	-	554	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTTTGCTGGTGCG	25	True	NA	-3	True	ATTAAA	-22	NA	46850825	46845650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46846143_46850763
transcript_102343.known	chr19	+	9290	7	FSM	ENSG00000160007.19	ENST00000672722.1	9290	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	14.3575377028545	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGAAGTGAAGGGGG	-1	True	NA	22	True	AATAAA	-22	NA	46860996	47005077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46861210_46918487_46922357_46937263_46937409_46987988_46988067_46989543_46989676_46999303_46999410_47000330
transcript_102345.known	chr19	+	2622	1	FSM	ENSG00000279948.1	ENST00000624074.1	2622	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	46946534	46949156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46946500_46949200
transcript_102357.known	chr19	+	2100	12	FSM	ENSG00000130751.10	ENST00000602212.6	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	14.8696818397883	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGAGCTCCTCTGTCCA	7	True	NA	27	True	ATTAAA	-34	NA	47019836	47045775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_102359.nic	chr19	+	2388	12	NIC	ENSG00000130751.10	novel	2100	12	NA	NA	-351	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	23.0977083761876	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	NA	False	NA	11	True	ATTAAA	-18	NA	47019485	47045759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47041024_47041126_47042809_47042905_47045190
transcript_10237.known	chr1	-	2678	16	FSM	ENSG00000116641.18	ENST00000404627.3	2678	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	33.8346305170046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTGTTGATGGAATT	-12	True	NA	-2	True	AATAAA	-16	NA	62688368	62584104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_62584879_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_102371.nnic	chr19	+	1990	11	NIC	ENSG00000130751.10	novel	2100	12	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	26.5360132649952	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	NA	False	NA	11	True	ATTAAA	-18	NA	47019782	47045759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47042809_47042905_47045190
transcript_10238.known	chr1	+	1228	2	FSM	ENSG00000235545.1	ENST00000453229.1	1228	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCCTAGTATTTTGC	-14	True	NA	NA	False	GATAAA	-19	NA	62688481	62710694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62688653_62709637
transcript_102386.nnic	chr19	+	1860	10	NIC	ENSG00000130751.10	novel	2100	12	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	29.697653396926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	-24	True	NA	11	True	ATTAAA	-18	NA	47019805	47045759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039406_47039565_47042809_47042905_47045190
transcript_102388.nic	chr19	+	1838	10	NIC	ENSG00000130751.10	novel	2100	12	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_6	25.4359520034338	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	-21	True	NA	11	True	ATTAAA	-18	NA	47019808	47045759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_102397.known	chr19	+	1643	10	FSM	ENSG00000130751.10	ENST00000602189.5	1643	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.5226680459153	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGAGAATTAAACGCCG	19	True	NA	-21	True	NA	NA	NA	47019848	47045727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47019998_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039403_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_102422.nic	chr19	+	1421	8	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	19.0177146205257	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	NA	False	NA	11	True	ATTAAA	-18	NA	47035296	47045759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_102424.known	chr19	+	1341	8	FSM	ENSG00000130751.10	ENST00000439365.6	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	29.0959005458059	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTGGGCTCCGGGCT	11	True	NA	10	True	ATTAAA	-17	NA	47035328	47045758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47041024_47041126_47042809_47042905_47045190
transcript_10243.known	chr1	+	2944	11	FSM	ENSG00000125703.15	ENST00000317868.9	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	48.0141645767163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTTAGTCTAAATAC	-19	True	NA	13	True	AATAAA	-18	NA	62784131	62865516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62784274_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_102430.nnic	chr19	+	1273	7	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_5	34.0669275919557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	NA	False	NA	11	True	ATTAAA	-18	NA	47035296	47045759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47042809_47042905_47045190
transcript_102456.nnic	chr19	+	999	5	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	34.7589916424513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	NA	False	NA	11	True	ATTAAA	-18	NA	47035296	47045759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47035359_47035963_47036130_47040443_47040551_47042809_47042905_47045190
transcript_102458.known	chr19	+	612	3	FSM	ENSG00000130751.10	ENST00000601169.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGTCTCCAAAACACC	14	True	NA	NA	False	NA	NA	NA	47035331	47040758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47035359_47035859_47036130_47040443
transcript_102460.known	chr19	-	655	3	FSM	ENSG00000130748.7	ENST00000253047.7	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	15	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGAGTATTGGTTCGT	-10	True	NA	-7	True	ATTAAA	-20	NA	47048624	47045908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47046253_47046592_47046686_47048406
transcript_102467.known	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	1399.69923577077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	-1	True	NA	23	True	AATAAA	-17	NA	47130858	47210191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
transcript_102470.nnic	chr19	+	2143	10	NNC	ENSG00000142230.13	novel	2211	10	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	233	junction_8	1295.49262282827	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCTTGTTTTTCTTCC	NA	False	NA	21	True	AATAAA	-15	NA	47130792	47210189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47205103_47205130_47209158
transcript_102481.known	chr19	+	2522	9	FSM	ENSG00000142230.13	ENST00000270225.12	2522	9	0	0	0	0	multi-exon	FALSE	canonical	3	3073	junction_8	183.386502706715	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGCAGTTAGTCGGG	-25	True	NA	26	True	AATAAA	-22	NA	47130834	47210636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_102487.known	chr19	+	2106	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	1078.71740246229	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	29	True	NA	22	True	AATAAA	-16	NA	47130888	47210190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_10249.known	chr1	+	2890	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	48.0141645767163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTCTTTAGTCTAAA	-16	True	NA	10	True	AATAAA	-15	NA	62784134	62865513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_102493.known	chr19	+	1851	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	1139.44585529232	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	35	True	NA	2	True	TTTAAA	-10	NA	47130894	47210170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
transcript_1025.known	chr1	-	2231	9	FSM	ENSG00000162576.17	ENST00000342753.8	2231	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	37.886136976472	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAGGTATGCTTCT	3003	False	NA	-11	True	AATAAA	-21	NA	1358794	1352688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1356680_1356705_1358455
transcript_102508.known	chr19	-	1846	4	FSM	ENSG00000105327.18	ENST00000439096.3	1846	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	75.9341820262785	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	1	True	NA	-8	True	AATAAA	-18	NA	47231199	47220823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47221919_47226563_47226755_47228157_47228447_47230928
transcript_102509.known	chr19	-	1827	4	FSM	ENSG00000105327.18	ENST00000449228.5	1827	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	95.660278532361	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	254	False	NA	-8	True	AATAAA	-18	NA	47232766	47220823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47221919_47226563_47226755_47228157_47228447_47232514
transcript_102512.nnic	chr19	-	1608	3	NIC	ENSG00000105327.18	novel	1846	4	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_2	69	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	1770	False	NA	-8	True	AATAAA	-18	NA	47231250	47220823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_47221919_47226563_47226755_47230928
transcript_102514.nic	chr19	+	2654	14	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-69	131	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	54.8284036440406	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTTGAACTGTGTTTC	919	False	NA	15	True	ATTAAA	-15	NA	47257462	47273832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47257910_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
transcript_102518.nic	chr19	+	2389	12	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	45.4072481198562	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	919	False	NA	18	True	AATAAA	-18	NA	47257462	47271953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47257910_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_102522.known	chr19	+	2027	12	FSM	ENSG00000105321.14	ENST00000221922.11	2027	12	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_1	28.1407325143871	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	-19	True	NA	18	True	AATAAA	-18	NA	47256524	47271953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_102523.nnic	chr19	+	777	2	Genic_Genomic	ENSG00000257704.4	novel	839	1	NA	NA	-506	-20	multi-exon	FALSE	canonical	3	42	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCCTGTTGTCTGCA	731	False	NA	34	True	AATAAA	-26	NA	47274378	47275703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr19_+_47274499_47275046
transcript_102524.known	chr19	+	839	1	FSM	ENSG00000257704.4	ENST00000552360.4	839	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCTCCCCTCCCAAG	-16	True	NA	54	True	NA	NA	NA	47274884	47275723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47274900_47275700
transcript_102528.nic	chr19	+	3990	18	NIC	ENSG00000134815.19	novel	4338	17	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	94	junction_13	46.7087715805132	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGTTAGGCCTGCACC	0	True	NA	25	True	AATAAA	-17	NA	47349312	47382279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47376914_47376990_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_102534.known	chr19	+	4338	17	FSM	ENSG00000134815.19	ENST00000328771.9	4338	17	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	41.6810339812966	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGCTCACTCCCGTA	2	True	NA	18	True	AATAAA	-27	NA	47349314	47382704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_102549.known	chr19	-	1758	13	FSM	ENSG00000105419.18	ENST00000441740.6	1758	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	42.9291244054922	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	200	False	NA	-13	True	GATAAA	-17	NA	47419315	47403123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_102554.known	chr19	-	2021	13	FSM	ENSG00000105419.18	ENST00000558555.6	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_8	34.1258903017766	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-12	True	NA	-13	True	GATAAA	-17	NA	47419527	47403123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_102558.known	chr19	-	2104	13	FSM	ENSG00000105419.18	ENST00000331559.9	2104	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	67.3997197488404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-8	True	NA	-13	True	GATAAA	-17	NA	47419523	47403123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_10256.known	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	272.422466033916	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
transcript_102560.known	chr19	-	1918	13	FSM	ENSG00000105419.18	ENST00000561293.5	1918	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	63.0030863441537	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACCAACTGGAGTTCT	227	False	NA	-15	True	GATAAA	-15	NA	47419288	47403125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_102568.nnic	chr19	-	1843	13	NNC	ENSG00000118162.14	novel	1636	12	NA	NA	-44	0	intron_retention	TRUE	canonical	1	3	junction_1	59.8588037709483	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	6749	False	NA	-15	True	NA	NA	NA	47484309	47475149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_47475545_47476114_47476232_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_102571.known	chr19	-	1636	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	24.4310464994411	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	10	True	NA	-15	True	NA	NA	NA	47484219	47475149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_102577.known	chr19	-	4959	10	FSM	ENSG00000118160.14	ENST00000236877.11	4959	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	4.78423336480244	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGAGGGGTGTGTGTG	13	True	NA	-4	True	AATAAA	-24	NA	47471893	47428016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47430466_47432166_47432446_47437461_47437562_47437848_47437974_47441168_47441187_47441336_47441441_47447808_47448232_47456929_47457595_47465728_47466420_47471788
transcript_102587.nnic	chr19	-	740	3	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3554	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	109	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	8268	False	NA	-15	True	NA	NA	NA	47480024	47475149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_47475545_47476531_47476715_47479862
transcript_10259.nnic	chr1	-	488	3	FSM	ENSG00000230798.6	ENST00000686970.1	492	3	-2	6	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	516.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-8	True	NA	-53	True	AATAAA	-24	NA	63321667	63320883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63321583
transcript_102590.known	chr19	-	1662	11	FSM	ENSG00000105402.8	ENST00000263354.8	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_9	35.8023742229478	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCCTCCTCACCT	-40	True	NA	-4	True	AATAAA	-20	NA	47515063	47487636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_102593.known	chr19	-	1417	9	FSM	ENSG00000105402.8	ENST00000594001.5	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_8	180.415795802363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGCCCAAGAAAGAAAA	-35	True	NA	-47	True	NA	NA	NA	47515058	47487679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47514842
transcript_102597.known	chr19	+	5739	15	FSM	ENSG00000063169.12	ENST00000396720.7	5739	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.66685152098943	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCCCCTTGGCCCAT	11	False	NA	16	True	ATTAAA	-26	NA	47608195	47703277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47608283_47670442_47670545_47673569_47673616_47673719_47673763_47675850_47675917_47679320_47681277_47681975_47682153_47694114_47694727_47694899_47695081_47695364_47695475_47696450_47696513_47698633_47698783_47698964_47699060_47699302_47699406_47701327
transcript_102599.nnic	chr19	+	2984	7	NNC	ENSG00000024422.12	novel	3506	6	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.7671766990109	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCAGTGAGGCTGGCT	NA	False	NA	17	True	AATAAA	-17	NA	47713373	47743133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_47713539_47716557_47717017_47718508_47718607_47725811_47726225_47736368_47736534_47740880_47741847_47742415
transcript_10260.nic	chr1	-	1241	3	FSM	ENSG00000230798.6	ENST00000686286.1	1247	3	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	301.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	1247	False	NA	-53	True	AATAAA	-24	NA	63322501	63320883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63321664
transcript_102602.known	chr19	+	3506	6	FSM	ENSG00000024422.12	ENST00000263277.8	3506	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	6.49307323229917	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAGTGAGGCTGGCTT	1	True	NA	18	True	AATAAA	-18	NA	47713421	47743134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47713539_47716557_47717017_47718508_47718607_47725811_47726225_47736368_47736534_47740880
transcript_102614.known	chr19	+	1504	13	FSM	ENSG00000105373.19	ENST00000246802.10	1504	13	0	0	0	0	multi-exon	TRUE	canonical	3	882	junction_12	121.15035997562	1990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGCTCCACGTGTGG	3	True	NA	27	True	AATAAA	-18	NA	47745545	47757058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47745784_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511_47752608_47754526_47754632_47754708_47754892_47755347_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47756998
transcript_10263.known	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	21.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	166	False	NA	-53	True	AATAAA	-24	NA	63323582	63320883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63323490
transcript_10264.known	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	NA	False	NA	-53	True	AATAAA	-24	NA	63324441	63320883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63324354
transcript_102642.known	chr19	+	4185	10	FSM	ENSG00000105373.19	ENST00000600410.5	4185	10	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_9	122.432747979361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGGGCTCCACGTGTG	22	False	NA	26	True	AATAAA	-17	NA	47745564	47757057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47745784_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511_47754892_47755347_47755524_47755755_47756605_47756687_47756745_47756998
transcript_102645.known	chr19	+	881	7	NNC	ENSG00000178980.16	novel	758	6	NA	NA	-92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1477.11156766621	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGTGAGGAGTGT	31	False	NA	42	True	AATAAA	-20	NA	47778584	47784684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_47778815_47780119_47780132_47780733_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_102648.known	chr19	+	758	6	FSM	ENSG00000178980.16	ENST00000601048.6	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_4	139.999142854519	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	-1	True	NA	40	True	AATAAA	-18	NA	47778702	47784682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_102649.known	chr19	+	550	6	FSM	ENSG00000178980.16	ENST00000593892.5	550	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1229.5147986096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCCTCAGGCATCCTTC	0	True	NA	-78	True	NA	NA	NA	47778676	47784564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784405
transcript_102650.known	chr19	+	636	6	FSM	ENSG00000178980.16	ENST00000599874.5	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1247.09672439631	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCGGAATCCACACCAC	6	False	NA	NA	False	NA	NA	NA	47778682	47784457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47781001_47781107_47781183_47781289_47781389_47784289
transcript_102654.known	chr19	+	717	5	FSM	ENSG00000178980.16	ENST00000601419.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1315.61135978677	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAATAAATATTGGATG	-13	True	NA	12	True	NA	NA	NA	47778690	47784654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_102657.known	chr19	+	2275	5	FSM	ENSG00000105392.16	ENST00000539067.5	2275	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAAGTCTGGGTGATTC	NA	False	NA	1	True	ATTAAA	-13	NA	47821906	47843323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47822011_47834408_47834544_47836242_47836395_47839319_47840434_47842553
transcript_10266.known	chr1	+	2562	1	FSM	ENSG00000187140.6	ENST00000371116.4	2562	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGTGTTTTATTTAGTT	-2	True	NA	11	True	AATAAA	-16	NA	63322566	63325128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63322600_63325100
transcript_10267.known	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	2219	False	NA	-53	True	AATAAA	-24	NA	63321529	63320883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366
transcript_102677.known	chr19	-	3957	28	FSM	ENSG00000105486.14	ENST00000601091.5	3957	28	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	106.455114287782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGAGGGGGTGGCTT	96	False	NA	-86	True	NA	NA	NA	48170252	48115523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48120166_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_10268.known	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	175	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-5	True	NA	-53	True	AATAAA	-24	NA	63322458	63320883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63322315
transcript_102684.known	chr19	-	3125	28	FSM	ENSG00000105486.14	ENST00000263274.12	3125	28	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_22	62.5211075468828	2157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	4	True	NA	-7	True	AATAAA	-18	NA	48170344	48115444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_10269.known	chr1	+	3325	15	FSM	ENSG00000088035.18	ENST00000263440.6	3325	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	83.0092507753546	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGATTCAAGGTATC	-17	True	NA	NA	False	AATAAA	-32	NA	63367626	63438553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_1027.nic	chr1	-	2454	9	NIC	ENSG00000162576.17	novel	2293	10	NA	NA	-40	0	intron_retention	FALSE	canonical	3	97	junction_7	14.6543508897528	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCCCAGGTATGCTT	3202	False	NA	-13	True	AATAAA	-19	NA	1358595	1352690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354510_1354681_1355153_1355243_1355346_1355449_1355753_1356680_1356705_1358455
transcript_102707.known	chr19	-	3027	27	FSM	ENSG00000105486.14	ENST00000427526.6	3027	27	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_25	122.397813918677	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	4	True	NA	-12	True	AATAAA	-13	NA	48170344	48115449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48165549_48165624_48170240
transcript_10271.known	chr1	-	1285	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	153.269390854272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523502	63440772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_102710.nnic	chr19	-	3325	27	NIC	ENSG00000105486.14	novel	3125	28	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_21	107.334549988817	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	NA	False	NA	-12	True	AATAAA	-13	NA	48170657	48115449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_10272.known	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	90.3949666740356	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-19	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_102731.known	chr19	-	3179	26	FSM	ENSG00000105486.14	ENST00000536218.5	3179	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	112.217973604944	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGACAGGGTCTGTG	NA	False	NA	-8	True	AATAAA	-17	NA	48170603	48115445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_10275.nic	chr1	-	934	8	NIC	ENSG00000142856.17	novel	945	6	NA	NA	0	-155	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	157.328332100841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTAAATAATTTCTTT	-19	True	NA	NA	False	AATAAA	-21	NA	63523225	63449457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_63449816_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_102786.known	chr19	-	602	4	FSM	ENSG00000105486.14	ENST00000600055.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	16.779617264871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGTCTTGGATGCC	4	True	NA	NA	False	NA	NA	NA	48170344	48161173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48161508_48162261_48162352_48165549_48165624_48170240
transcript_102788.known	chr19	-	5610	14	FSM	ENSG00000105483.18	ENST00000651546.1	5610	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	21.5137220556181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAGAAGTTAAATTGAT	-13	True	NA	NA	False	AATAAA	-38	NA	48255912	48208085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_102792.known	chr19	-	3041	13	FSM	ENSG00000105483.18	ENST00000520753.5	3041	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	23.1641185649031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAATCACTCAGAAGAT	13	True	NA	NA	False	AATAAA	-18	NA	48255886	48210486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48211976_48215339_48215385_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_102799.known	chr19	-	614	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	7.92148975887743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTGGTTTATGTACA	1	True	NA	-6	True	ATTAAA	-14	NA	48255898	48238335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_10280.known	chr1	-	873	8	FSM	ENSG00000142856.17	ENST00000460394.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	169.407731794735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGATTTTGAGCTATA	24	True	NA	NA	False	ATTAAA	-15	NA	63523182	63451724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63452065_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_102800.known	chr19	+	3600	4	FSM	ENSG00000185453.13	ENST00000614654.2	3600	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	5.55777733351102	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGATGAGTTCTTGG	3	True	NA	24	True	AATAAA	-16	NA	48170679	48197620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48170715_48171793_48172078_48182454_48182768_48194652
transcript_102801.known	chr19	-	500	4	FSM	ENSG00000105483.18	ENST00000519332.5	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28.003967972811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTTTATGTACATT	6	True	NA	-4	True	ATTAAA	-16	NA	48255893	48238333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48238533_48240961_48241064_48249750_48249848_48255791
transcript_102803.known	chr19	+	2499	6	FSM	ENSG00000178150.10	ENST00000595607.6	2499	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	39.3883231427793	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGTGCAGTGACTCAC	-1	True	NA	15	True	AATAAA	-18	NA	48270080	48287608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48270220_48271244_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_10281.known	chr1	+	2178	14	FSM	ENSG00000203965.13	ENST00000371088.5	2178	14	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_7	9.00887136735837	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGTGTTCTTATTTA	-1	True	NA	7	True	ATTAAA	-19	NA	63523524	63572693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63545915_63546058_63551724_63551835_63555357_63555516_63557113_63557248_63561708_63561858_63568309_63568520_63571020_63571129_63572441
transcript_102812.nnic	chr19	+	2457	6	NIC	ENSG00000178150.10	novel	2499	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	37.4197808652055	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGTGCAGTGACTCAC	-1	True	NA	15	True	AATAAA	-18	NA	48270080	48287608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48270220_48271286_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_102818.known	chr19	+	2206	5	FSM	ENSG00000178150.10	ENST00000315849.5	2206	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	7.58287544405155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGGTGCAGTGACTC	25	True	NA	13	True	AATAAA	-16	NA	48271396	48287606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_102820.nic	chr19	+	1088	5	NIC	ENSG00000142227.11	novel	753	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	92.1964614288423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	1	True	NA	30	True	AATAAA	-14	NA	48321479	48330553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48321978_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_102821.known	chr19	+	761	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.1264925525243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	18	False	NA	30	True	AATAAA	-14	NA	48325346	48330553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
transcript_102822.known	chr19	+	263	3	FSM	ENSG00000142227.11	ENST00000594198.1	263	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGCACCCGCGAGGGG	-20	True	NA	NA	False	NA	NA	NA	48325543	48330355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48325611_48329351_48329493_48330300
transcript_102823.known	chr19	+	649	5	FSM	ENSG00000142227.11	ENST00000270221.11	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	25.7196422992234	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	-12	True	NA	30	True	AATAAA	-14	NA	48325551	48330553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_102830.nnic	chr19	-	2654	8	NNC	ENSG00000161558.11	novel	2263	8	NA	NA	-205	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	35.6485108599309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	NA	False	NA	-16	True	AATAAA	-18	NA	48364264	48332356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_48333434_48334007_48334198_48342529_48342810_48343252_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_102831.known	chr19	-	2263	8	FSM	ENSG00000161558.11	ENST00000293261.8	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	15.1064251771441	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-10	True	NA	-15	True	AATAAA	-19	NA	48363940	48332355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_102836.known	chr19	-	2272	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	26.560727065015	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATGAGGCTACTCTT	-8	True	NA	-20	True	AATAAA	-14	NA	48364059	48332360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
transcript_102839.nic	chr19	-	3097	7	NIC	ENSG00000161558.11	novel	2263	8	NA	NA	-205	0	intron_retention	FALSE	canonical	3	72	junction_4	15.8578757159407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	NA	False	NA	-16	True	AATAAA	-18	NA	48364264	48332356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48333434_48334007_48334198_48342529_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_10284.known	chr1	+	2337	11	FSM	ENSG00000079739.17	ENST00000371084.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_6	66.3502825917117	755	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGTCGTCTTTTTTTC	15	True	NA	NA	False	AATAAA	-17	NA	63593410	63660245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63659585
transcript_102844.known	chr19	-	1960	6	FSM	ENSG00000161558.11	ENST00000377431.6	1960	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.5272058208014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	-8	True	NA	-16	True	AATAAA	-18	NA	48363938	48332356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48363290_48363532_48363897
transcript_102854.known	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	TRUE	canonical	3	902	junction_4	108.308298389366	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-12	True	NA	-25	True	AATAAA	-16	NA	48391551	48382574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
transcript_102857.known	chr19	-	1594	4	FSM	ENSG00000105438.9	ENST00000597017.5	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_2	68.7071078322081	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTCTTTTGCTGCTC	25	True	NA	-28	True	AATAAA	-13	NA	48390855	48382577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423
transcript_10288.known	chr1	+	5274	27	FSM	ENSG00000158966.16	ENST00000290039.6	5274	27	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_19	28.2363230755777	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGCTACAGTGATTTG	556	False	NA	9	True	AATAAA	-20	NA	64470792	64693058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_64470943_64550593_64550657_64582155_64582305_64602805_64602913_64629354_64629482_64632598_64632744_64634043_64634261_64641819_64641970_64647800_64648035_64652160_64652311_64653757_64653882_64654685_64654804_64658704_64658874_64663694_64663838_64664497_64664680_64666056_64666168_64671563_64671687_64673157_64673258_64673347_64673465_64675400_64675562_64675896_64675984_64676894_64677012_64678158_64678311_64679594_64679757_64681257_64681336_64682004_64682107_64691322
transcript_102881.nic	chr19	+	3900	13	NIC	ENSG00000105443.16	novel	4443	12	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_12	65.7220578564677	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	0	True	NA	28	True	ATTAAA	-17	NA	48469250	48482314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122_48480089_48480749
transcript_102901.known	chr19	+	4443	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	22.7407232925377	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	3	True	NA	28	True	ATTAAA	-17	NA	48469368	48482314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_102907.known	chr19	+	1546	12	FSM	ENSG00000105443.16	ENST00000391881.7	1546	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	85.5149689665813	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAATTATTTAACCACT	70	False	NA	19	True	NA	NA	NA	48469320	48479365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474954_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_102914.known	chr19	+	4652	11	FSM	ENSG00000105443.16	ENST00000493260.5	4652	11	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_10	15.9878078547373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCCTGCTGACCCCCT	16	False	NA	36	True	NA	NA	NA	48469346	48479382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48478146_48478274_48478347_48478437_48478593_48479122
transcript_102924.known	chr19	+	5361	7	FSM	ENSG00000105447.13	ENST00000253237.10	5361	7	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_5	41.5521760360794	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTCTGTTGCCCAGGC	-3	True	NA	NA	False	NA	NA	NA	48445982	48457022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48446193_48446384_48446503_48446680_48446844_48450312_48450527_48450665_48450809_48451033_48451232_48452707
transcript_102935.known	chr19	+	4606	12	FSM	ENSG00000105443.16	ENST00000427476.4	4606	12	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_8	85.5149689665813	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGAATGTGATCTGAT	-10	True	NA	27	True	ATTAAA	-16	NA	48469207	48482313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478065_48478146_48478274_48478347_48478437_48478593_48479122
transcript_102937.nnic	chr19	+	821	5	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-2034	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	3.57071421427143	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	NA	False	NA	6	True	AATAAA	-14	NA	48589066	48599423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48589196_48591608_48591736_48592721_48592817_48596738_48596920_48599134
transcript_10294.known	chr1	-	5092	25	FSM	ENSG00000162434.13	ENST00000342505.5	5092	25	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	14.6765473346651	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	-21	True	NA	-6	True	AATAAA	-17	NA	64966549	64833228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_102940.known	chr19	-	4112	7	FSM	ENSG00000105523.4	ENST00000263266.4	4112	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCGTTACTAAAGACTGG	-12	True	NA	0	True	AATAAA	-19	NA	48615076	48599960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48601370_48603493_48603912_48609875_48610001_48610679_48610848_48612907_48614628_48614707_48614840_48614936
transcript_102944.known	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	1863.44746967072	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	167	False	NA	-67	True	NA	NA	NA	48619127	48615392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
transcript_102947.known	chr19	-	3844	1	FSM	ENSG00000063177.13	ENST00000547892.1	3844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTGTGTGTGTTATT	5	True	NA	-6	True	ATTAAA	-16	NA	48619175	48615331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615300_48619200
transcript_102948.known	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_3	757.400965289999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-3	True	NA	-5	True	ATTAAA	-17	NA	48619183	48615330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
transcript_102949.known	chr19	-	1645	5	FSM	ENSG00000063177.13	ENST00000552347.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_4	655.959221293519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTGTTATTGGGG	131	False	NA	-2	True	ATTAAA	-20	NA	48619163	48615327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48617424_48617790_48617878_48619140
transcript_102950.known	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	1748.49487655336	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	4	True	NA	-10	True	ATTAAA	-12	NA	48619176	48615335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
transcript_102951.known	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_5	620.377111118713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	3	True	NA	-40	True	NA	NA	NA	48619177	48615365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_102954.known	chr19	+	2748	7	FSM	ENSG00000063176.16	ENST00000245222.9	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	64.8650308118498	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	46	True	NA	34	True	AATAAA	-23	NA	48619505	48630405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619544_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_102955.known	chr19	+	2136	7	FSM	ENSG00000063176.16	ENST00000600537.5	2136	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.2671799011543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACGTGATGCTGGAAGG	-8	True	NA	NA	False	NA	NA	NA	48619451	48629916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619544_48620401_48620554_48626067_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_102958.known	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	70.6456336623542	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-2	True	NA	34	True	AATAAA	-23	NA	48619533	48630405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_10296.nic	chr1	-	1348	8	ISM	ENSG00000162434.13	ENST00000342505.5	5092	25	-19	31699	-16	0	5prime_fragment	FALSE	canonical	3	104	junction_1	12.158813046259	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAAAATAAACACAAGAA	-40	True	NA	-21	True	AATAAA	-16	NA	64966568	64864927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_102969.known	chr19	+	2492	6	FSM	ENSG00000063176.16	ENST00000340932.7	2492	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	85.9665051051862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTGCCCTTCCTCCAT	3145	False	NA	35	True	AATAAA	-24	NA	48619290	48630406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619544_48620401_48620554_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_102975.nic	chr19	+	2643	6	NIC	ENSG00000063176.16	novel	3085	6	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	75.07702711216	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-29	True	NA	34	True	AATAAA	-23	NA	48624354	48630405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48624440_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_102979.known	chr19	+	2683	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	37.2580192710241	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	68	False	NA	34	True	AATAAA	-23	NA	48624951	48630405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_102982.nic	chr19	+	2627	6	NIC	ENSG00000063176.16	novel	1542	6	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	71.8849080127394	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-22	True	NA	34	True	AATAAA	-23	NA	48624361	48630405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48624431_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_10299.nic	chr1	-	708	5	ISM	ENSG00000162434.13	ENST00000673254.1	4930	25	-16	40196	-16	0	5prime_fragment	FALSE	canonical	3	111	junction_1	9.33742469849155	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGAAAAATGGCTACG	-40	True	NA	NA	False	NA	NA	NA	64966568	64873457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_103.known	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_2	952.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_4081_4568_4780_6570
transcript_10300.known	chr1	+	4398	12	FSM	ENSG00000162437.14	ENST00000294428.7	4398	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	28.8856394301607	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTTAGTATATTTAT	-29	True	NA	18	True	ATTAAA	-15	NA	64745094	64833229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_64745422_64768655_64768723_64777622_64778093_64781379_64781572_64789387_64789515_64802975_64803062_64804733_64804839_64804990_64805106_64807205_64807475_64812737_64812850_64814703_64814841_64830838
transcript_103006.known	chr19	-	2170	4	FSM	ENSG00000105516.11	ENST00000222122.10	2170	4	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_3	8.73053390247253	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGGCCCCAGATCAGACG	-10	True	NA	NA	False	NA	NA	NA	48637379	48630029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48631053_48633443_48633656_48635579_48635991_48636855
transcript_103012.known	chr19	-	712	3	FSM	ENSG00000105516.11	ENST00000593500.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	41.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACGTGATAATGCAGAT	5748	False	NA	-81	True	NA	NA	NA	48634526	48630730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48631053_48633443_48633656_48634348
transcript_103013.known	chr19	-	709	3	FSM	ENSG00000105516.11	ENST00000599385.5	709	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	48.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGAGCCTCCCCCCTCCCTT	10005	False	NA	-35	True	GATAAA	-24	NA	48634636	48630684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48631053_48633443_48633656_48634507
transcript_103018.nic	chr19	+	1666	2	ISM	ENSG00000063176.16	ENST00000599748.5	2683	6	-591	3565	18	26	5prime_fragment	FALSE	canonical	3	101	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGCAGAGGTCGCGTG	-23	True	NA	NA	False	NA	NA	NA	48624360	48626840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_48625077_48625890
transcript_103020.known	chr19	-	1715	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	43.015803781866	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-12	True	NA	-17	True	ATTAAA	-21	NA	48646187	48637945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
transcript_103025.known	chr19	+	1593	3	FSM	ENSG00000176920.13	ENST00000391876.5	1593	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTAAATGTTTGCAG	49	False	NA	NA	False	NA	NA	NA	48696038	48705614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48696080_48702954_48704209_48705316
transcript_103026.known	chr19	+	1449	2	FSM	ENSG00000176920.13	ENST00000522966.2	1449	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATCCCAGCTACTC	-19	True	NA	NA	False	AATACA	-27	NA	48695970	48704294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48696080_48702954
transcript_103031.known	chr19	-	3199	12	FSM	ENSG00000105538.10	ENST00000222145.9	3199	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	31.6700447668959	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-8	True	NA	-21	True	AATAAA	-20	NA	48740610	48720584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48738959_48739646_48740145_48740287_48740520
transcript_103034.nnic	chr19	-	2352	10	NNC	ENSG00000105538.10	novel	3199	12	NA	NA	1181	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	27.0965352438688	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGCCTCGATTGTTAAGA	9342	False	NA	-23	True	AATAAA	-18	NA	48737524	48720586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48737452
transcript_103041.known	chr19	-	3425	2	FSM	ENSG00000174951.12	ENST00000645652.2	3425	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCTCTGTAGCTTTT	-2	True	NA	-5	True	ATTAAA	-16	NA	48752641	48748010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48751284_48752489
transcript_103042.known	chr19	+	893	3	FSM	ENSG00000105550.10	ENST00000222157.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGTGTGAGTGTCTG	15	False	NA	NA	False	AATAAA	-23	NA	48756086	48758333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48756472_48756925_48757030_48757929
transcript_10305.known	chr1	+	6887	6	FSM	ENSG00000162433.15	ENST00000545314.5	6887	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	315.347807983503	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	-43	True	NA	39	True	AATAAA	-27	NA	65147548	65232145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65147666_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_103066.known	chr19	-	2041	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_11	152.001359280569	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	-1	True	NA	-4	True	AATAAA	-15	NA	48811027	48795064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
transcript_103074.known	chr19	-	1579	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	103.687463080162	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTTTGCTGCAAT	8	True	NA	-13	True	NA	NA	NA	48810916	48795109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
transcript_10309.known	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	328.221510568701	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	50	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_103091.known	chr19	-	1272	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	136.217140533047	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGGCTTCTTCAGTGA	41	False	NA	-1	True	AATAAA	-18	NA	48811012	48795061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
transcript_103098.known	chr19	-	1449	8	FSM	ENSG00000105552.15	ENST00000599246.5	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	144.164022232048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTATTCCCATCTTCTG	-3	True	NA	NA	False	CATAAA	-6	NA	48811029	48795864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
transcript_103106.known	chr19	-	1563	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_10	94.0372798415607	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-3	True	NA	-3	True	AATAAA	-16	NA	48811029	48795063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
transcript_103108.known	chr19	-	1050	9	FSM	ENSG00000087076.9	ENST00000263278.9	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	34.9979910137711	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	15	True	NA	-8	True	CATAAA	-19	NA	48836491	48813017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_103109.known	chr19	-	991	8	FSM	ENSG00000087076.9	ENST00000599157.5	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	92.9147074318316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGAGGAGGATATCG	-4	True	NA	-14	True	CATAAA	-13	NA	48836510	48813023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48832665_48832753_48834275_48834359_48835804_48835844_48836323
transcript_103110.nic	chr19	-	1235	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-266	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	72.4163134174862	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGAGGATATCGTTA	NA	False	NA	-11	True	CATAAA	-16	NA	48836776	48813020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_103114.known	chr19	-	3073	20	FSM	ENSG00000105559.12	ENST00000263265.11	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_12	19.6591453135642	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	-11	True	NA	-7	True	ATTAAA	-15	NA	48868617	48837096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48837552_48838016_48838130_48839204_48839264_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
transcript_103141.known	chr19	+	2350	3	FSM	ENSG00000087074.8	ENST00000200453.6	2350	3	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	11.5	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGCAGCGTCTGTATGTG	1	True	NA	16	True	AATAAA	-16	NA	48872420	48876058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48872652_48873224_48874899_48875613
transcript_103144.nic	chr19	+	3075	2	ISM	ENSG00000087074.8	ENST00000200453.6	2350	3	-12	2	-12	-2	intron_retention	FALSE	canonical	3	323	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGAGCAGCGTCTGTATG	NA	False	NA	14	True	AATAAA	-14	NA	48872408	48876056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_48872652_48873224
transcript_103149.nic	chr19	-	2210	6	NIC	ENSG00000104804.8	novel	1763	13	NA	NA	554	-2398	intron_retention	FALSE	canonical	2	4	junction_1	1.72046505340853	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTGGCTATTTTTATG	4193	False	NA	NA	False	AATAAA	-39	NA	48896185	48883368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48884047_48885447_48885561_48887949_48888262_48889509_48889632_48894997_48895163_48895365
transcript_10316.nnic	chr1	+	1718	5	NIC	ENSG00000162433.15	novel	6887	6	NA	NA	-222	138	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	384.092762233292	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGTCTTGGGAACC	359	False	NA	52	True	NA	NA	NA	65147326	65227029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_65147666_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_103179.known	chr19	+	2406	13	FSM	ENSG00000104805.16	ENST00000405315.9	2406	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	80.8783379870998	1779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGAGGCTCAATCCT	-20	True	NA	117	True	NA	NA	NA	48900311	48923372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48900373_48900785_48900932_48904346_48904455_48905752_48905886_48911148_48911253_48913010_48913197_48913473_48913565_48918725_48918785_48919029_48919123_48919193_48919287_48921153_48921325_48921826_48921933_48922317
transcript_103208.known	chr19	+	1064	7	FSM	ENSG00000104808.8	ENST00000221403.7	1064	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	5.52016505389306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGTGGTTTGGCAGAA	2	True	NA	10	True	AATAAA	-21	NA	48933698	48944969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48933812_48934999_48935112_48936031_48936196_48939448_48939702_48942439_48942565_48944356_48944508_48944823
transcript_103210.known	chr19	+	715	5	FSM	ENSG00000104808.8	ENST00000520557.1	715	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.87386354243376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	61	False	NA	9	True	AATAAA	-20	NA	48933757	48944968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48933812_48934999_48935112_48939448_48939702_48944356_48944508_48944823
transcript_103213.nnic	chr19	+	833	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	788.032588158637	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-2	True	NA	17	True	AATAAA	-17	NA	48954810	48961798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954937_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_103217.nnic	chr19	+	908	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	183	junction_5	750.88257404204	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-2	True	NA	17	True	AATAAA	-17	NA	48954810	48961798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961482
transcript_103218.known	chr19	+	795	6	FSM	ENSG00000087088.21	ENST00000345358.12	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	170.653332812459	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-8	True	NA	17	True	AATAAA	-17	NA	48954874	48961798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_103220.nic	chr19	+	775	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	971.678630000681	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-2	True	NA	17	True	AATAAA	-17	NA	48954841	48961798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954963_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_103227.known	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	161.82706819318	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	46	False	NA	17	True	AATAAA	-17	NA	48954928	48961798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
transcript_103229.known	chr19	+	433	5	FSM	ENSG00000087088.21	ENST00000354470.7	433	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	811.297109572073	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCTGCCTTGGACT	46	False	NA	NA	False	NA	NA	NA	48954928	48961637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955600_48956197_48956334_48960809_48960915_48961531
transcript_10323.known	chr1	+	6845	5	FSM	ENSG00000162433.15	ENST00000327299.8	6845	5	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	115.970901522753	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	13	True	NA	39	True	AATAAA	-27	NA	65148202	65232145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_103231.known	chr19	+	775	5	FSM	ENSG00000087088.21	ENST00000513545.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	187.904230926289	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCATTTTTCTTACTTT	14	True	NA	-68	True	CATAAA	-39	NA	48954896	48961713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955834_48956197_48956334_48960809_48960915_48961531
transcript_103241.known	chr19	+	383	4	FSM	ENSG00000087088.21	ENST00000506183.5	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	923.674305273359	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCTTGGACTGT	46	False	NA	NA	False	NA	NA	NA	48954928	48961639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48956197_48956334_48960809_48960915_48961531
transcript_103246.known	chr19	+	458	3	FSM	ENSG00000087088.21	ENST00000539787.2	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCCGATTCATCTAC	46	False	NA	NA	False	NA	NA	NA	48954928	48961097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48956197_48956334_48960809
transcript_103248.known	chr19	+	687	6	NNC	ENSG00000087088.21	novel	677	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1002.10350762783	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCGGCATCTGAGTCA	46	False	NA	14	True	AATAAA	-14	NA	48954928	48961795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954965_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_103252.known	chr19	+	871	4	FSM	ENSG00000087086.15	ENST00000331825.11	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	24196	junction_2	1762.03903349374	15455	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGGTTTTGTGTGTGG	0	True	NA	42	True	AATAAA	-14	NA	48965308	48966879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48965610_48965769_48965917_48966280_48966407_48966582
transcript_103258.known	chr19	-	3569	16	FSM	ENSG00000104812.15	ENST00000323798.8	3569	16	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_14	22.3232813199334	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTGTGGTCAGACAT	-1	True	NA	-23	True	AATACA	-15	NA	48993309	48968129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48987193_48987386_48991301_48991484_48992994
transcript_103273.nnic	chr19	+	1663	16	NNC	ENSG00000183207.14	novel	1545	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	535.211318598136	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	-3	True	NA	17	True	TATAAA	-18	NA	48993882	49015926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48993924_48994775_48994934_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_103282.nic	chr19	+	2499	15	NIC	ENSG00000183207.14	novel	1545	15	NA	NA	-694	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	430.869339539381	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	NA	False	NA	17	True	TATAAA	-18	NA	48992867	49015926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48993903_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_103284.known	chr19	+	1563	15	FSM	ENSG00000183207.14	ENST00000596247.5	1563	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	450.23368648845	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTATGTGTGGTTG	12	True	NA	20	True	TATAAA	-21	NA	48993897	49015929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004206_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_103288.known	chr19	+	1545	15	FSM	ENSG00000183207.14	ENST00000595090.6	1545	15	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_1	235.452061934883	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGAGTGCGGATTGAG	1	True	NA	12	True	NA	NA	NA	48993886	49015970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_103311.known	chr19	+	1853	13	FSM	ENSG00000183207.14	ENST00000594338.1	1853	13	0	0	0	0	multi-exon	FALSE	canonical	3	1308	junction_5	225.686160531734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTCTGTATAAAATGGT	5433	False	NA	-15	True	NA	NA	NA	48999318	49015894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_103312.known	chr19	+	1478	15	FSM	ENSG00000183207.14	ENST00000221413.10	1478	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	451.000588261529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	13	True	NA	17	True	TATAAA	-18	NA	48993898	49015926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009872_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_103320.nic	chr19	-	2064	2	ISM	ENSG00000225950.8	ENST00000595857.5	813	4	186	-492	-27	-10	intron_retention	FALSE	canonical	3	32	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATGGATTTGATCATT	7989	False	NA	38	True	AATACA	-17	NA	49064868	49061075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_49062010_49063738
transcript_103321.nic	chr19	-	3354	2	ISM	ENSG00000225950.8	ENST00000595857.5	813	4	-1158	-438	-1158	-64	intron_retention	FALSE	canonical	3	32	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACTGAGTGTTTACTG	6645	False	NA	-16	True	NA	NA	NA	49066212	49061129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_49062010_49063738
transcript_103323.known	chr19	-	2151	5	FSM	ENSG00000196337.13	ENST00000684222.1	2151	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	8.7571399440685	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGGTGTCTTTCTGT	-7	True	NA	NA	False	AATAAA	-17	NA	49057749	49054273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49054606_49054840_49055009_49055360_49056596_49057120_49057249_49057461
transcript_103335.known	chr19	+	1671	10	FSM	ENSG00000104852.15	ENST00000598441.6	1671	10	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_9	164.772570532841	4319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGCACCTCGGTTTCT	2	True	NA	20	True	AATAAA	-17	NA	49085450	49108604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794
transcript_103336.known	chr19	+	1603	10	FSM	ENSG00000104852.15	ENST00000221448.9	1603	10	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_9	362.847687665836	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCCCTTGGATTTAAAA	2	True	NA	-7	True	NA	NA	NA	49085450	49108563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107821
transcript_103337.known	chr19	+	1757	11	FSM	ENSG00000104852.15	ENST00000601065.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	614.274726812035	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATAGTGGGCACCTCG	NA	False	NA	14	True	AATAAA	-11	NA	49085418	49108598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113_49102174_49104633_49104736_49107624_49107713_49107794
transcript_103338.known	chr19	+	3144	11	FSM	ENSG00000104852.15	ENST00000401730.5	3144	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	615.68450524599	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGGGCACCTCGGTTTC	2	True	NA	19	True	AATAAA	-16	NA	49085450	49108603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113_49103588_49104633_49104736_49107624_49107713_49107794
transcript_103339.known	chr19	+	1673	11	FSM	ENSG00000104852.15	ENST00000595231.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_8	658.485269387251	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCACCTCGGTTTCTT	46	False	NA	21	True	AATAAA	-18	NA	49085494	49108605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113_49102186_49104633_49104736_49107624_49107713_49107821
transcript_103340.known	chr19	+	3221	3	FSM	ENSG00000104852.15	ENST00000544278.2	3221	3	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_2	202	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGGGCACCTCGGTTT	3970	False	NA	18	True	AATAAA	-15	NA	49102410	49108602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49104736_49107624_49107713_49107794
transcript_103341.known	chr19	+	746	6	FSM	ENSG00000104863.12	ENST00000221459.7	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	7.30479294709987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	-7	True	NA	16	True	TTTAAA	-16	NA	49114369	49118460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118019_49118351
transcript_103345.known	chr19	+	582	5	FSM	ENSG00000104863.12	ENST00000391864.7	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.7313138121007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	9679	False	NA	16	True	TTTAAA	-16	NA	49114323	49118460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49117854_49118019_49118351
transcript_10335.known	chr1	+	4541	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	20.8859335970941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	-16	True	NA	NA	False	AATAAA	-21	NA	65420667	65436007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
transcript_103350.known	chr19	-	742	1	FSM	ENSG00000221916.4	ENST00000408991.4	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGTGAACGTCCAGAT	-23	True	NA	-16	True	AATAAA	-35	NA	49119143	49118401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49118400_49119100
transcript_103351.known	chr19	+	4583	30	FSM	ENSG00000177380.14	ENST00000334186.9	4583	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	27.1712322515738	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTTGTTGACTGATTT	-20	True	NA	10	True	NA	NA	NA	49119543	49151026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49119723_49127858_49128114_49128366_49128469_49128847_49129013_49129379_49129455_49129992_49130068_49130377_49130600_49133000_49133148_49133236_49133372_49133795_49133880_49134033_49134166_49134638_49134702_49134835_49134916_49135778_49135924_49136723_49136912_49138204_49138428_49139667_49139832_49139960_49140089_49141419_49141514_49142033_49142116_49142803_49143005_49145942_49146006_49146165_49146193_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
transcript_103352.nic	chr19	+	4832	29	ISM	ENSG00000177380.14	ENST00000334186.9	4583	30	-170	5	-170	0	intron_retention	FALSE	canonical	0	0	junction_22	23.1038858380214	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	108	False	NA	5	True	NA	NA	NA	49119373	49151021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_49119723_49127858_49128114_49128366_49128469_49128847_49129013_49129379_49129455_49129992_49130068_49130377_49130600_49133000_49133148_49133236_49133372_49133795_49133880_49134033_49134166_49134638_49134702_49134835_49134916_49135778_49135924_49136723_49136912_49138204_49138428_49139667_49139832_49139960_49140089_49141419_49141514_49142033_49142116_49142803_49143005_49145942_49146006_49146165_49146193_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079
transcript_103355.nic	chr19	+	4289	28	ISM	ENSG00000177380.14	ENST00000334186.9	4583	30	8683	0	-62	0	3prime_fragment	FALSE	canonical	0	0	junction_20	26.7207784317748	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTTGTTGACTGATTT	8535	False	NA	10	True	NA	NA	NA	49128226	49151026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_49128469_49128847_49129013_49129379_49129455_49129992_49130068_49130377_49130600_49133000_49133148_49133236_49133372_49133795_49133880_49134033_49134166_49134638_49134702_49134835_49134916_49135778_49135924_49136723_49136912_49138204_49138428_49139667_49139832_49139960_49140089_49141419_49141514_49142033_49142116_49142803_49143005_49145942_49146006_49146165_49146193_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
transcript_103357.nic	chr19	+	4402	27	ISM	ENSG00000177380.14	ENST00000334186.9	4583	30	8949	0	-87	0	3prime_fragment	FALSE	canonical	0	0	junction_19	26.4519492911539	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTTGTTGACTGATTT	8801	False	NA	10	True	NA	NA	NA	49128492	49151026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_49129013_49129379_49129455_49129992_49130068_49130377_49130600_49133000_49133148_49133236_49133372_49133795_49133880_49134033_49134166_49134638_49134702_49134835_49134916_49135778_49135924_49136723_49136912_49138204_49138428_49139667_49139832_49139960_49140089_49141419_49141514_49142033_49142116_49142803_49143005_49145942_49146006_49146165_49146193_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
transcript_103363.nic	chr19	+	4454	25	ISM	ENSG00000177380.14	ENST00000602351.5	4341	28	619	5	-87	0	intron_retention	FALSE	canonical	3	23	junction_5	18.8478926025048	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	8801	False	NA	5	True	NA	NA	NA	49128492	49151021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_49129013_49129379_49129455_49129992_49130068_49130377_49130600_49133000_49133148_49133236_49133372_49133795_49133880_49134033_49134166_49134638_49134702_49134835_49134916_49135778_49135924_49136723_49136912_49138204_49138428_49139667_49139832_49139960_49140089_49141419_49141514_49142033_49142116_49142803_49143005_49145942_49146006_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079
transcript_10337.known	chr1	+	492	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	99.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGGAGATGAGTTTTA	3	True	NA	NA	False	AAGAAA	-8	NA	65420586	65432064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_103376.known	chr19	+	980	2	FSM	ENSG00000177380.14	ENST00000602783.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	391	False	NA	5	True	NA	NA	NA	49149957	49151021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49150152_49150235
transcript_103377.known	chr19	-	2357	6	FSM	ENSG00000130528.12	ENST00000252825.9	2357	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	2.48193472919817	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCAGACGTGGGG	5	True	NA	-10	True	AATAAA	-15	NA	49155396	49151197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49152309_49152379_49153260_49153332_49153406
transcript_103379.known	chr19	+	4058	25	FSM	ENSG00000130529.16	ENST00000252826.10	4058	25	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	22.2091932291312	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCCGGAGGCTTGATT	-9	True	NA	8	True	AATAAA	-16	NA	49157791	49211836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49157891_49158191_49158260_49166040_49166216_49167916_49168098_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49181348_49181462_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49196439_49196875_49200299_49200433_49200610_49200786_49201963_49202142_49210208_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_103383.known	chr19	+	3444	24	FSM	ENSG00000130529.16	ENST00000427978.6	3444	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	25.98239916102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCAGAACCAGTCCCA	14	True	NA	NA	False	NA	NA	NA	49157814	49211680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49157891_49158191_49158260_49166040_49166216_49167916_49168098_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49181348_49181462_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49200299_49200433_49200610_49200786_49201963_49202142_49210208_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_103394.known	chr19	+	3702	23	FSM	ENSG00000130529.16	ENST00000595519.5	3702	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24.7832338020273	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCCGGAGGCTTGATT	-9	True	NA	8	True	AATAAA	-16	NA	49157791	49211836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49157891_49158191_49158260_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49181348_49181462_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49196439_49196875_49200299_49200433_49200610_49200786_49201963_49202142_49210208_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_10340.known	chr1	+	4978	15	FSM	ENSG00000198160.15	ENST00000357692.6	4978	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	40.7792088882438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGCTATCGATGGA	NA	False	NA	18	True	AATAAA	-19	NA	66924956	66988031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66925096_66926141_66926243_66928886_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_103400.nic	chr19	+	3591	22	NIC	ENSG00000130529.16	novel	3702	23	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_7	28.0921709383097	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCCGGAGGCTTGATT	-11	True	NA	8	True	AATAAA	-16	NA	49157789	49211836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49157891_49158191_49158260_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49196439_49196875_49200299_49200433_49200610_49200786_49201963_49202142_49210208_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_103407.known	chr19	+	1829	2	FSM	ENSG00000130529.16	ENST00000599628.5	1829	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAGTGCTCAAAACCTT	-9	True	NA	8	True	AATAAA	-19	NA	49157791	49159921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49157891_49158191
transcript_10343.known	chr1	+	5456	14	FSM	ENSG00000198160.15	ENST00000401041.6	5456	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	33.1550062263578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	-9	True	NA	NA	False	ATTAAA	-17	NA	66924989	66988619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_103452.known	chr19	-	2191	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	189.62235862073	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	11	True	NA	-8	True	GATAAA	-17	NA	49361495	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
transcript_103456.known	chr19	-	2175	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_12	180.753899604468	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	9	True	NA	-8	True	GATAAA	-17	NA	49362416	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
transcript_103457.nic	chr19	-	2186	13	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_8	165.880730245157	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	NA	False	NA	-8	True	GATAAA	-17	NA	49362467	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_10346.known	chr1	+	4818	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	19.3238123107792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTGCTATCGATGG	-24	True	NA	17	True	AATAAA	-18	NA	66930242	66988030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_103479.nnic	chr19	-	2166	13	NNC	ENSG00000074219.14	novel	2175	13	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_2	193.540621633347	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	NA	False	NA	-8	True	GATAAA	-17	NA	49362486	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_49341438_49342437_49342591_49343269_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_10349.known	chr1	+	3875	16	FSM	ENSG00000198160.15	ENST00000371018.7	3875	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	42.1220449012945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	66924894	66988619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66925096_66926141_66926243_66928889_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984653_66986402
transcript_103503.known	chr19	-	1444	12	FSM	ENSG00000074219.14	ENST00000539846.5	1444	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	211.052380792107	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACAGATCACTCCGGA	-16	True	NA	NA	False	GATAAA	-33	NA	49362441	49341081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49362372
transcript_103510.known	chr19	-	2167	12	FSM	ENSG00000074219.14	ENST00000601519.5	2167	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	188.798156245375	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	18	True	NA	-8	True	GATAAA	-17	NA	49362407	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362328
transcript_103511.known	chr19	-	2164	12	FSM	ENSG00000074219.14	ENST00000311227.6	2164	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_11	121.041554233411	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-32	True	NA	-8	True	GATAAA	-17	NA	49362457	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_103536.nnic	chr19	-	2123	12	NNC	ENSG00000074219.14	novel	2164	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_2	168.619724736604	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-30	True	NA	-8	True	GATAAA	-17	NA	49362455	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_49341438_49342437_49342591_49343269_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_10355.nic	chr1	+	888	8	ISM	ENSG00000198160.15	ENST00000371014.5	1728	15	-47	23511	17	3081	5prime_fragment	FALSE	canonical	3	30	junction_2	38.5597866028476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGTTATTAGTAAAGTT	NA	False	NA	NA	False	AAGAAA	-9	NA	66924911	66963159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_103560.nnic	chr19	-	2055	11	NIC	ENSG00000074219.14	novel	2164	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_7	178.777962847774	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-31	True	NA	-8	True	GATAAA	-17	NA	49362456	49340594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_10357.nic	chr1	+	777	7	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	-16	23511	-16	3081	5prime_fragment	FALSE	canonical	3	65	junction_1	21.7689891563409	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGTTATTAGTAAAGTT	46	False	NA	NA	False	AAGAAA	-9	NA	66930226	66963159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_103616.known	chr19	+	939	5	FSM	ENSG00000104901.7	ENST00000221498.7	939	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	8.44097150806707	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	20	True	NA	6	True	AATAAA	-19	NA	49363876	49375116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49364009_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_103618.known	chr19	+	1259	8	FSM	ENSG00000104894.12	ENST00000323906.9	1259	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.349927106111883	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTATCCTCTGTCAGA	-34	True	NA	17	True	AATAAA	-22	NA	49335405	49340606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49335610_49335713_49335787_49336908_49337034_49337146_49337222_49337924_49338030_49338699_49338937_49339329_49339414_49340250
transcript_10363.known	chr1	+	3773	17	FSM	ENSG00000081985.13	ENST00000648487.1	3773	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.78107443266087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCAGCCTGGGCAACAG	0	True	NA	NA	False	GGGGCT	-16	NA	67307904	67397090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_67307968_67313912_67314001_67320336_67320445_67321601_67321890_67326734_67326850_67328199_67328385_67329586_67329730_67330659_67330811_67338623_67338704_67350869_67351090_67367824_67368026_67372435_67372535_67372624_67372784_67379985_67380124_67386578_67386670_67390028_67390129_67395546
transcript_103639.known	chr19	+	3099	17	FSM	ENSG00000161618.10	ENST00000293350.9	3099	17	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_7	26.7575193870807	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTGTCAATTTCCAT	-39	True	NA	25	True	AATAAA	-18	NA	49453224	49471050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_10364.known	chr1	+	4040	16	FSM	ENSG00000081985.13	ENST00000262345.5	4040	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.75196899207337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCGGATCATGAGGTC	-4	True	NA	NA	False	NA	NA	NA	67307363	67396900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_67307968_67320332_67320445_67321601_67321890_67326734_67326850_67328199_67328385_67329586_67329730_67330659_67330811_67338623_67338704_67350869_67351090_67367824_67368026_67372435_67372535_67372624_67372784_67379985_67380124_67386578_67386670_67390028_67390129_67395546
transcript_103659.known	chr19	+	2470	16	FSM	ENSG00000161618.10	ENST00000455361.6	2470	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	58.7510756402714	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTGCTTCTGCGAG	-28	True	NA	-17	True	AATAAA	-14	NA	49453235	49470585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_103663.nnic	chr19	+	2550	16	NIC	ENSG00000161618.10	novel	3099	17	NA	NA	-96	0	combination_of_known_splicesites	TRUE	canonical	2	5	junction_5	61.1181006103938	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGCTTCTGCGAGAA	NA	False	NA	-15	True	AATAAA	-16	NA	49453128	49470587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_103682.known	chr19	+	2343	15	FSM	ENSG00000161618.10	ENST00000593417.5	2343	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.0660134676152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGCTTCTGCGAGAA	24	True	NA	-15	True	AATAAA	-16	NA	49453287	49470587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49453422_49459669_49459849_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_103688.known	chr19	+	2174	14	FSM	ENSG00000161618.10	ENST00000540132.5	2174	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4840595745686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTTCCCCTTCTGGTT	-39	True	NA	-26	True	NA	NA	NA	49453224	49470534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49453422_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_10370.known	chr1	-	6676	8	FSM	ENSG00000142864.15	ENST00000370994.8	6676	8	0	0	0	0	multi-exon	FALSE	canonical	3	1834	junction_5	800.644689214477	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATTGAATTCTTT	2	True	NA	-5	True	AGTAAA	-21	NA	67430415	67407809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_103700.known	chr19	-	992	10	FSM	ENSG00000104872.11	ENST00000596049.5	992	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	292.334325772208	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTTCTGAGATGTGGA	-3	True	NA	-78	True	NA	NA	NA	49453494	49446368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484_49451579_49453392
transcript_103707.known	chr19	+	1050	9	FSM	ENSG00000090554.13	ENST00000597551.6	1050	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.59506743650334	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	-19	True	NA	6	True	TATAAA	-17	NA	49474214	49486231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49486014
transcript_103708.known	chr19	-	998	9	FSM	ENSG00000104872.11	ENST00000601807.5	998	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	321.91591972905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGGTGCCTTCTTGAT	1890	False	NA	-110	True	NA	NA	NA	49451601	49446400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451367
transcript_10371.known	chr1	-	6681	8	FSM	ENSG00000142864.15	ENST00000361219.11	6681	8	0	0	0	0	multi-exon	FALSE	canonical	3	1726	junction_5	830.867999536064	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATTGAATTCTTT	0	True	NA	-5	True	AGTAAA	-21	NA	67430402	67407809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_103712.known	chr19	+	1127	8	FSM	ENSG00000142541.18	ENST00000391857.9	1127	8	0	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2275.28244490253	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTCTTTGCACTGTG	2	True	NA	16	True	AATAAA	-16	NA	49487607	49492308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_103714.known	chr19	+	1342	8	FSM	ENSG00000142541.18	ENST00000679106.1	1342	8	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_7	5864.34805604587	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAATGATCCTTTATAGA	3199	False	NA	135	True	AATATA	-25	NA	49487509	49492427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491730
transcript_103717.known	chr19	+	850	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2451.17540965327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	9	False	NA	46	True	AATAAA	-37	NA	49487614	49491861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_103723.known	chr19	+	728	5	FSM	ENSG00000142541.18	ENST00000472481.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2798.21934451179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATGCCAATGGCTTAGC	2	True	NA	NA	False	NA	NA	NA	49487607	49491228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778
transcript_103727.known	chr19	-	1197	9	FSM	ENSG00000104872.11	ENST00000262265.10	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_3	87.0972875582242	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCTGACTGGGGAT	1	True	NA	-7	True	AATAAA	-16	NA	49451814	49446297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484
transcript_103728.known	chr19	+	660	8	FSM	ENSG00000142541.18	ENST00000467825.2	660	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5902.79414985058	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCTGCCCTTCCTCCA	10	False	NA	28	True	AATAAA	-19	NA	49487633	49491843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490601_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_103729.known	chr19	+	794	8	FSM	ENSG00000142541.18	ENST00000484279.5	794	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6114.36257294817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCTGAGCCCAATAAAGA	2	True	NA	-8	True	AATACA	-28	NA	49487607	49491807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49490091_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_10373.known	chr1	-	1621	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1128.55848093839	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	45	False	NA	NA	False	AATATA	-24	NA	67430372	67412866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_103730.known	chr19	+	430	5	FSM	ENSG00000142534.7	ENST00000599561.1	430	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2780.41278410239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	17	False	NA	44	True	AATAAA	-19	NA	49496453	49499689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49497283_49497580_49497596_49497916_49498047_49499511
transcript_103732.known	chr19	+	573	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	791.396352973654	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	-3	True	NA	63	True	AATAAA	-38	NA	49496433	49499708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_103735.known	chr19	+	751	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	911.842944566418	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	-6	True	NA	44	True	AATAAA	-19	NA	49496430	49499689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
transcript_103737.known	chr19	+	1133	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	2218	False	NA	44	True	AATAAA	-19	NA	49496369	49499689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49498047_49499511
transcript_10374.known	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1147.13107981857	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	31	False	NA	-32	True	AATAAA	-34	NA	67430386	67411037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_103748.nic	chr19	+	2122	6	NIC	ENSG00000104870.13	novel	1511	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_1	58.4568216720684	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-11	True	NA	21	True	AATATA	-20	NA	49512634	49526333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49512751_49513386_49513474_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_103756.nic	chr19	+	2302	5	NIC	ENSG00000104870.13	novel	1511	7	NA	NA	-7	0	intron_retention	FALSE	canonical	2	4	junction_1	70.004910542047	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	55	False	NA	21	True	AATATA	-20	NA	49512367	49526333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49512751_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_103763.nic	chr19	+	2198	5	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	95	junction_1	44.2747106145258	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-37	True	NA	21	True	AATATA	-20	NA	49513194	49526333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49513474_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_103775.nic	chr19	+	2634	4	ISM	ENSG00000104870.13	ENST00000426395.7	1559	6	41	0	0	0	intron_retention	FALSE	canonical	3	95	junction_1	3.55902608401044	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-37	True	NA	21	True	AATATA	-20	NA	49513194	49526333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_49513474_49513881_49514134_49514210_49514487_49524506
transcript_103776.nic	chr19	+	1922	4	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_2	77.3836043501608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-37	True	NA	21	True	AATATA	-20	NA	49513194	49526333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49513474_49513881_49514134_49524506_49525574_49526009
transcript_103778.nic	chr19	+	2275	4	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	95	junction_1	48.6643835080875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-37	True	NA	21	True	AATATA	-20	NA	49513194	49526333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49513474_49513881_49514487_49524506_49525574_49526009
transcript_103790.nic	chr19	+	1645	3	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	23	0	intron_retention	FALSE	canonical	3	23	junction_1	89.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-12	True	NA	21	True	AATATA	-20	NA	49513219	49526333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49513474_49524506_49525574_49526009
transcript_103793.known	chr19	+	2681	3	FSM	ENSG00000104870.13	ENST00000595881.1	2681	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	49.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTGTTCTCATCAT	-37	True	NA	19	True	AATATA	-18	NA	49513194	49526331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49514487_49524506_49525574_49526009
transcript_103794.known	chr19	+	1469	7	FSM	ENSG00000142552.8	ENST00000270645.8	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	12.4632793972266	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	-9	True	NA	14	True	AATAAA	-15	NA	49528002	49543633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
transcript_103799.nnic	chr19	-	1123	10	NNC	ENSG00000142546.14	novel	1000	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	246.121068271112	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	0	True	NA	-4	True	AATAAA	-18	NA	49580571	49555710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557089_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49576758_49576878_49580514
transcript_103804.known	chr19	-	1000	9	FSM	ENSG00000142546.14	ENST00000339093.7	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	184.001188854855	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-3	True	NA	-4	True	AATAAA	-18	NA	49580558	49555710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557080_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
transcript_103813.known	chr19	+	1403	7	FSM	ENSG00000126460.11	ENST00000246794.10	1403	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	1.63299316185545	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	-10	True	NA	4	True	AAAAAG	-40	NA	49581315	49591004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49581482_49583206_49583305_49583541_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_103825.known	chr19	-	933	3	FSM	ENSG00000142546.14	ENST00000593345.1	933	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_2	49	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACTAGATTCTGCCCCA	8	True	NA	NA	False	NA	NA	NA	49580547	49559210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49560040_49560621_49560693_49580514
transcript_103828.known	chr19	+	7416	14	FSM	ENSG00000126464.15	ENST00000418929.7	7416	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	12.1109271409342	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCAGGCTGGAGTGCCTC	-10	True	NA	37	True	NA	NA	NA	49591181	49626439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49591741_49593326_49593440_49594453_49594616_49594696_49598014_49599271_49599939_49601490_49601919_49614532_49614650_49614875_49615010_49615746_49616220_49620351_49620478_49621524_49621623_49624843_49624991_49625104_49625201_49625460
transcript_103833.known	chr19	-	986	6	FSM	ENSG00000126458.4	ENST00000246792.4	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	15.816447135814	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGCTTTCTAAAAAGG	-23	True	NA	-21	True	AATAAA	-18	NA	49640143	49635291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49635661_49635733_49635853_49636618_49636728_49636823_49636927_49637042_49637131_49639945
transcript_103841.known	chr19	-	1494	8	FSM	ENSG00000126456.16	ENST00000593922.5	1494	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	181.969945937481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664442_49664674_49665630
transcript_103842.known	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	186.356581612252	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-7	True	NA	-65	True	NA	NA	NA	49665842	49659631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
transcript_103848.known	chr19	-	1741	8	FSM	ENSG00000126456.16	ENST00000597198.5	1741	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	148.452699812542	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGTGCGTGTCTGGT	-22	True	NA	-6	True	AATAAA	-16	NA	49665857	49659572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665483
transcript_103850.known	chr19	-	1556	8	FSM	ENSG00000126456.16	ENST00000601291.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	149.753811576309	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-22	True	NA	-5	True	AATAAA	-17	NA	49665802	49659571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660845_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_103851.nic	chr19	-	1555	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	139.736486696516	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-26	True	NA	-8	True	AATAAA	-14	NA	49665861	49659574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665671
transcript_103855.known	chr19	+	1064	7	FSM	ENSG00000126453.10	ENST00000246784.8	1064	7	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_2	148.893324975374	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	0	True	NA	16	True	AATAAA	-39	NA	49665932	49673916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_103864.known	chr19	-	1442	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	151.343703756273	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGCGTGTCTGGTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	49665875	49659569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_103868.known	chr19	-	1055	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	171.413162336567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_103871.nic	chr19	+	809	6	NIC	ENSG00000126453.10	novel	1431	7	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_5	401.760127439247	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	NA	False	NA	16	True	AATAAA	-39	NA	49665914	49673916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49673697
transcript_103872.known	chr19	+	1630	6	FSM	ENSG00000126453.10	ENST00000619007.4	1630	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	424.68039747556	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	NA	False	NA	15	True	AATAAA	-38	NA	49665141	49673915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669165_49673697
transcript_103874.known	chr19	+	893	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	350.397146107099	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	-33	True	NA	16	True	AATAAA	-39	NA	49665960	49673916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_103881.known	chr19	-	1117	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	169.085303914917	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	104	False	NA	-12	True	AATAAA	-10	NA	49665731	49659578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
transcript_103889.known	chr19	+	620	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	508.219686749736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	-33	True	NA	16	True	AATAAA	-39	NA	49665960	49673916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
transcript_103895.known	chr19	-	680	5	FSM	ENSG00000126456.16	ENST00000601373.5	680	5	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_4	164.715474379307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTGGGAGACAGGACG	-4	True	NA	NA	False	NA	NA	NA	49665784	49662238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_103898.known	chr19	-	2874	7	FSM	ENSG00000126456.16	ENST00000597636.5	2874	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	161.01311195745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-22	True	NA	-8	True	AATAAA	-14	NA	49665857	49659574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661449_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
transcript_103937.known	chr19	+	1686	11	FSM	ENSG00000126457.22	ENST00000532489.5	1686	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1856.29609976426	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	9903	False	NA	28	True	AATAAA	-13	NA	49675896	49688447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49676261_49676345_49676440_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_103945.known	chr19	+	1328	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	1729.67530189917	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	4	True	NA	28	True	AATAAA	-13	NA	49677270	49688447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_103966.known	chr19	+	1393	10	FSM	ENSG00000126457.22	ENST00000391851.8	1393	10	0	0	0	0	multi-exon	FALSE	canonical	3	4181	junction_1	275.844964508045	6794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	84	False	NA	28	True	AATAAA	-13	NA	49677151	49688447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_10397.known	chr1	+	1352	4	FSM	ENSG00000116717.13	ENST00000370986.9	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	12.2836838484589	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	1	True	NA	14	True	AATAAA	-22	NA	67685200	67688334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_67685539_67686024_67686127_67686349_67686588_67687660
transcript_104.known	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_2	5.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_+_1347_1678_1886_2389
transcript_10400.nic	chr1	+	1598	3	NIC	ENSG00000116717.13	novel	1093	4	NA	NA	-24	0	intron_retention	FALSE	canonical	3	180	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTATTGTGTGCTCTT	124	False	NA	13	True	AATAAA	-21	NA	67685176	67688333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_67685539_67686024_67686588_67687660
transcript_104000.known	chr19	+	1192	8	FSM	ENSG00000126457.22	ENST00000610806.4	1192	8	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	1672.2673231275	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTCCTGGGGGC	84	False	NA	31	True	AATAAA	-16	NA	49677151	49688450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49686092_49686244_49686604_49686727_49688161
transcript_104004.known	chr19	+	915	7	FSM	ENSG00000126457.22	ENST00000534676.5	915	7	0	0	0	0	multi-exon	FALSE	canonical	3	4181	junction_1	321.072897572429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGCTGCTGTGTGAGAA	12	False	NA	NA	False	TTTAAA	-9	NA	49677248	49685215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921
transcript_10402.known	chr1	-	4395	4	FSM	ENSG00000172380.6	ENST00000370982.4	4395	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	8.05536398239638	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTCCCCTTTCCCTT	-5	True	NA	-25	True	AATAAA	-15	NA	67833467	67701474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67705577_67707593_67707713_67777457_67777508_67833343
transcript_104022.known	chr19	+	2846	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	57.4336181919175	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-9	True	NA	11	True	AATAAA	-16	NA	49691115	49713731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_104023.known	chr19	+	2785	20	FSM	ENSG00000169169.15	ENST00000405931.6	2785	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	80.7642854614228	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	19	True	NA	11	True	AATAAA	-16	NA	49691143	49713731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_104027.nic	chr19	+	2887	20	NIC	ENSG00000169169.15	novel	2910	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	93.2929143452814	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-9	True	NA	11	True	AATAAA	-16	NA	49691115	49713731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49691341_49691660_49691771_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_104030.known	chr19	+	2783	19	FSM	ENSG00000169169.15	ENST00000323446.9	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	57.3137617326818	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-15	True	NA	11	True	AATAAA	-16	NA	49691109	49713731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_104043.nnic	chr19	+	2600	18	NIC	ENSG00000169169.15	novel	2783	19	NA	NA	-8	0	intron_retention	FALSE	canonical	2	5	junction_13	89.0475554298246	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	3	True	NA	11	True	AATAAA	-16	NA	49691127	49713731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_104045.nic	chr19	+	2718	18	NIC	ENSG00000169169.15	novel	2783	19	NA	NA	-37	0	intron_retention	FALSE	canonical	3	18	junction_4	87.2109957830269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	1477	False	NA	11	True	AATAAA	-16	NA	49691072	49713731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_104066.known	chr19	+	1027	4	FSM	ENSG00000169169.15	ENST00000600944.5	1027	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	68.2104586311122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTAGGGAGGCTGAGGCA	23	False	NA	NA	False	AATACA	-42	NA	49691147	49697935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325
transcript_104069.known	chr19	-	1854	11	FSM	ENSG00000126467.11	ENST00000246801.8	1854	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.13541565040626	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAATTCTGTCTGCTTT	-1	True	NA	NA	False	AATAAA	-16	NA	49763306	49739759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49739933_49740058_49740184_49741884_49742021_49744230_49744405_49745201_49745397_49746469_49746799_49747388_49747473_49748084_49748169_49748373_49748470_49762003_49762233_49763077
transcript_10407.nic	chr1	-	2055	12	NIC	ENSG00000116729.14	novel	2037	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	16.977379213491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCTCTTACATCCA	-7	True	NA	-15	True	AATAAA	-17	NA	68232557	68098472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_104071.known	chr19	+	3286	24	FSM	ENSG00000196961.13	ENST00000359032.9	3286	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	157.853513008099	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCCATGTCTGTGTC	121	False	NA	12	True	AATAAA	-13	NA	49767133	49807110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802533_49802600_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_104077.known	chr19	+	3357	23	FSM	ENSG00000196961.13	ENST00000354293.10	3357	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	112.688996434237	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	-12	True	NA	16	True	AATAAA	-17	NA	49767000	49807114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_10408.known	chr1	-	2716	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	7.99379924981113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGCGTGCAGATTAT	-1	True	NA	-3	True	NA	NA	NA	68232523	68125359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_10409.known	chr1	-	2037	12	FSM	ENSG00000116729.14	ENST00000354777.6	2037	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.3908293459673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCTCTTACATCCA	5	True	NA	-15	True	AATAAA	-17	NA	68232545	68098472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194222_68232193
transcript_10410.known	chr1	-	5299	12	FSM	ENSG00000024526.17	ENST00000456315.7	5299	12	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	24.7726855712743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-7	True	NA	-9	True	ATTAAA	-17	NA	68497082	68474151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_104121.nic	chr19	-	1788	12	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_2	80.2500225277381	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGGCATCCCCCAAAC	6900	False	NA	-25	True	AATAAA	-22	NA	49813326	49806884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49807375_49808114_49808160_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_104131.nic	chr19	-	1930	11	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	64.8676344566379	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	6900	False	NA	-6	True	AATAAA	-41	NA	49813326	49806865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812446_49812737_49812995
transcript_104133.known	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_9	34.4158393766591	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-10	True	NA	-6	True	AATAAA	-41	NA	49813292	49806865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_104134.known	chr19	-	1524	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	69.5589677899263	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	6977	False	NA	-30	True	AATAAA	-17	NA	49813249	49806889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
transcript_104136.known	chr19	-	1632	11	FSM	ENSG00000010361.14	ENST00000377092.8	1632	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	61.9044424900184	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAACAAAAATAAAAATACA	9	True	NA	-60	True	NA	NA	NA	49813273	49806919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
transcript_10414.known	chr1	-	4586	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	65.0984638835664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	NA	False	NA	-9	True	ATTAAA	-17	NA	68497221	68474151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_10415.nic	chr1	-	2403	11	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-31	3644	-31	-899	5prime_fragment	FALSE	canonical	3	168	junction_4	24.5823107131937	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	-5	True	NA	NA	False	ATTAAA	-37	NA	68497113	68477795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_104152.known	chr19	-	1483	10	FSM	ENSG00000010361.14	ENST00000525370.5	1483	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	92.5868294502751	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAGTCCCAGGCATC	7070	False	NA	-33	True	AATAAA	-14	NA	49813156	49806892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
transcript_104154.known	chr19	-	1479	10	FSM	ENSG00000010361.14	ENST00000528094.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	71.7801857181242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	0	True	NA	-30	True	AATAAA	-17	NA	49813175	49806889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812637_49812737_49812995
transcript_104202.known	chr19	+	2332	18	FSM	ENSG00000104973.19	ENST00000312865.10	2332	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_7	24.3428509929233	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTCCCGTCACTG	-8	True	NA	17	True	AATAAA	-17	NA	49818288	49836979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_104203.known	chr19	+	4003	18	FSM	ENSG00000104973.19	ENST00000593767.3	4003	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_17	73.6047143818842	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCCGTCGACTTTT	-8	True	NA	7	True	AGTAAA	-17	NA	49818288	49840383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49838579
transcript_10423.known	chr1	-	2843	15	FSM	ENSG00000066557.6	ENST00000370952.4	2843	15	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_7	24.4320173008238	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTTTATGTTTTCA	-14	True	NA	NA	False	AATAAA	-23	NA	70205579	70144804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
transcript_104243.known	chr19	-	1731	17	FSM	ENSG00000039650.12	ENST00000322344.8	1731	17	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_16	30.1080735642452	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-12	True	NA	-2	True	AATAAA	-17	NA	49867576	49861203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_104273.known	chr19	-	1602	16	FSM	ENSG00000039650.12	ENST00000600573.5	1602	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	71.7083599651316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCCCTCCACAATAAA	-12	True	NA	-38	True	NA	NA	NA	49867576	49861239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_104276.known	chr19	-	1600	16	FSM	ENSG00000039650.12	ENST00000600910.5	1600	16	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	68.0165339376308	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	9	True	NA	-2	True	AATAAA	-17	NA	49867555	49861203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_1043.known	chr1	-	875	4	FSM	ENSG00000175756.14	ENST00000378853.3	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_3	1426.0927973546	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCCTGCGGGTCTGG	13	True	NA	-30	True	AATAAA	-15	NA	1375173	1373736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1374996
transcript_104308.known	chr19	+	1623	13	FSM	ENSG00000104973.19	ENST00000538643.5	1623	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	97.9459530670983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTTTTTAACACACGC	45	False	NA	0	True	NA	NA	NA	49818341	49836962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49818476_49818570_49818617_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_104314.known	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	361.055474346471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	20	True	NA	12	True	NA	NA	NA	49851019	49860725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_104319.known	chr19	+	1587	13	FSM	ENSG00000104960.15	ENST00000601675.5	1587	13	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_12	308.965511829395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	14	False	NA	27	True	AATAAA	-15	NA	49851224	49860740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_104320.known	chr19	+	1577	13	FSM	ENSG00000104960.15	ENST00000599732.5	1577	13	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_1	102.530347810891	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTCTGCTCACTGCC	9	False	NA	31	True	AATAAA	-19	NA	49851190	49860744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_10435.known	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	311.187867515571	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	11	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_104368.known	chr19	-	2025	5	FSM	ENSG00000204673.11	ENST00000391831.5	2025	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	139.968746511498	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAATGTGAAGTGTGTT	2116	False	NA	NA	False	ATTAAA	-15	NA	49876249	49869045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49875873
transcript_104371.known	chr19	-	1911	5	FSM	ENSG00000204673.11	ENST00000391832.7	1911	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	128.757524051995	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGTTGTGAGTG	1086	False	NA	NA	False	ATTAAA	-22	NA	49877279	49869038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49877024
transcript_104372.known	chr19	-	1775	5	FSM	ENSG00000204673.11	ENST00000344175.10	1775	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	129.619635858152	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGTTGTGAGTG	1010	False	49877386	NA	False	ATTAAA	-22	NA	49877355	49869038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49877236
transcript_104376.known	chr19	+	1012	3	FSM	ENSG00000104973.19	ENST00000593636.1	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCTGGGATTACAGGC	-8	True	NA	NA	False	NA	NA	NA	49818288	49819950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49818476_49818570_49818617_49819171
transcript_104378.known	chr19	-	752	3	FSM	ENSG00000039650.12	ENST00000626274.2	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	28.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGTACCTGTCCAAG	0	True	NA	NA	False	AGTAAA	-25	NA	49867564	49865953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49866446_49867053_49867218_49867468
transcript_104379.known	chr19	-	645	3	FSM	ENSG00000039650.12	ENST00000595792.1	645	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	87.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGAGGCTGAAGCGGGA	3	True	NA	NA	False	NA	NA	NA	49867561	49866140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49866529_49867053_49867218_49867468
transcript_104381.known	chr19	+	506	2	FSM	ENSG00000104973.19	ENST00000593595.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGACTGCTGGGTCTG	-15	True	NA	NA	False	NA	NA	NA	49818281	49818882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49818476_49818570
transcript_104385.known	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.7639090570042	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	10036	False	NA	-29	True	NA	NA	NA	49867286	49861230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
transcript_104386.known	chr19	-	1723	16	FSM	ENSG00000039650.12	ENST00000593946.5	1723	16	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_15	68.7395729466578	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-3	True	NA	-2	True	AATAAA	-17	NA	49867234	49861203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866529_49867053
transcript_104387.known	chr19	-	3075	5	FSM	ENSG00000204673.11	ENST00000391835.1	3075	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	78.0464605219225	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAATGTGAAGTGTGTT	337	False	NA	NA	False	ATTAAA	-15	NA	49878028	49869045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49876602
transcript_104388.known	chr19	-	1849	5	FSM	ENSG00000204673.11	ENST00000391834.6	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	136.949580138093	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTGAGTGTTCATT	9	True	NA	NA	False	ATTAAA	-28	NA	49878356	49869032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49878169
transcript_104389.known	chr19	+	2370	18	NNC	ENSG00000104946.14	novel	2095	17	NA	NA	-241	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	124.60661976228	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGCTTCTTGTTGGTGG	9738	False	NA	28	True	ATTAAA	-19	NA	49877424	49888749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_49877745_49878142_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887821_49888012_49888026_49888230_49888318_49888423
transcript_10439.known	chr1	+	2385	13	FSM	ENSG00000116754.14	ENST00000370951.5	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	293.336872611224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	-31	True	NA	NA	False	NA	NA	NA	70205681	70251617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_104390.known	chr19	+	2095	17	FSM	ENSG00000104946.14	ENST00000221543.10	2095	17	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	47.5525613794883	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGCTTCTTGTTGGTGGG	-5	True	NA	29	True	ATTAAA	-20	NA	49877701	49888750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49877745_49878142_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888230_49888318_49888423
transcript_104391.known	chr19	+	2831	15	FSM	ENSG00000104946.14	ENST00000596243.5	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	89.7380826036959	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGGCTTCTTGTTGGTG	433	False	NA	27	True	ATTAAA	-18	NA	49878549	49888748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49879505_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888230_49888318_49888423
transcript_104392.known	chr19	+	1716	8	FSM	ENSG00000104960.15	ENST00000597793.5	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_7	95.6338681362093	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	1077	False	NA	27	True	AATAAA	-15	NA	49856135	49860740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_104393.known	chr19	-	619	2	FSM	ENSG00000039650.12	ENST00000629088.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGAAAAGAAAAAA	8	True	NA	NA	False	NA	NA	NA	49867258	49866031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49866446_49867053
transcript_1044.known	chr1	-	798	4	FSM	ENSG00000175756.14	ENST00000321751.9	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	1605.00557285291	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCGGGTCTGGAGCTC	17	True	NA	-25	True	AATAAA	-20	NA	1375169	1373731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375074
transcript_104400.known	chr19	-	894	4	FSM	ENSG00000213024.12	ENST00000596437.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.1976430375211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGCGACTCTTGCTT	-1	True	NA	NA	False	NA	NA	NA	49929531	49909580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49911104_49911367_49927693_49927816_49929325
transcript_104406.known	chr19	-	473	4	FSM	ENSG00000213024.12	ENST00000596680.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.698993277254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGCAAAGACGGCAACAA	-8	True	NA	NA	False	NA	NA	NA	49929429	49909751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49918507_49918622_49927693_49927816_49929325
transcript_104408.known	chr19	+	2007	3	FSM	ENSG00000169136.13	ENST00000423777.7	2007	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATCTTGTCTTTGA	1	True	NA	11	True	AATAAA	-19	NA	49929204	49933935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49929401_49930731_49931029_49932421
transcript_104409.known	chr19	+	722	3	FSM	ENSG00000169136.13	ENST00000596658.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACTACCAC	395	False	NA	NA	False	NA	NA	NA	49930218	49932632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49930433_49930731_49931029_49932421
transcript_104410.known	chr19	-	3361	3	FSM	ENSG00000213024.12	ENST00000352066.8	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	21	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-17	True	NA	-1	True	AATAAA	-19	NA	49929504	49906824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49927693_49927816_49929325
transcript_104411.known	chr19	-	562	3	FSM	ENSG00000213024.12	ENST00000599560.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	58.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATTTGCTTTGGGAGCC	2835	False	NA	NA	False	NA	NA	NA	49929763	49909858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49927693_49927816_49929349
transcript_104413.known	chr19	-	2053	3	FSM	ENSG00000213024.12	ENST00000597029.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	29.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-22	True	NA	-2	True	NA	NA	NA	49929443	49908104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49927693_49927849_49929325
transcript_104428.known	chr19	-	3479	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	2854	False	NA	-1	True	AATAAA	-19	NA	49929744	49906824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49929325
transcript_104429.nnic	chr19	-	3229	2	NIC	ENSG00000213024.12	novel	3479	2	NA	NA	-4	0	intron_retention	FALSE	canonical	3	64	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	3080	False	49929530	-1	True	AATAAA	-19	NA	49929518	49906824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49909885_49929349
transcript_104430.nnic	chr19	-	3569	2	NIC	ENSG00000213024.12	novel	3479	2	NA	NA	-162	0	intron_retention	FALSE	canonical	3	24	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-1	True	NA	-1	True	AATAAA	-19	NA	49929925	49906824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49909885_49929416
transcript_104432.nnic	chr19	-	2520	2	NIC	ENSG00000213024.12	novel	562	3	NA	NA	-4	571	intron_retention	FALSE	canonical	3	64	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAGGAGACAGCAGCCT	3080	False	49929530	NA	False	AAAAAG	-4	NA	49929518	49907533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49909885_49929349
transcript_104433.nnic	chr19	-	2860	2	NIC	ENSG00000213024.12	novel	579	3	NA	NA	-162	571	intron_retention	FALSE	canonical	3	24	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAGGAGACAGCAGCCT	-1	True	NA	NA	False	AAAAAG	-4	NA	49929925	49907533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49909885_49929416
transcript_104437.known	chr19	-	1923	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	41.9129321039583	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	14	True	NA	-7	True	AATAAA	-14	NA	50025372	49976467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_104438.known	chr19	-	2126	15	FSM	ENSG00000105053.11	ENST00000599538.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_14	23.9804342014442	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAATGAAGTAA	163	False	NA	NA	False	NA	NA	NA	50025946	49976759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_104443.known	chr19	-	1749	14	FSM	ENSG00000105053.11	ENST00000377011.6	1749	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	55.4068331504636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAATAAATTGTTTTAC	14	True	NA	-31	True	NA	NA	NA	50025372	49976491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025266
transcript_104444.nic	chr19	-	1919	14	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	43.8134831048063	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-1	True	NA	-7	True	AATAAA	-14	NA	50025597	49976467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_104450.known	chr19	-	1831	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	59.7849734929736	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	782	False	NA	-14	True	AATAAA	-19	NA	50025327	49981699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_104451.nic	chr19	-	1885	13	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	48.7119509634614	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	3	True	NA	-14	True	AATAAA	-19	NA	50025460	49981699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_104455.nic	chr19	-	1731	12	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	62.4835846211422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	7	True	NA	-14	True	AATAAA	-19	NA	50025456	49981699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_104458.known	chr19	-	1979	12	FSM	ENSG00000105053.11	ENST00000593919.5	1979	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_11	26.3259919326826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTGTGTGTGGGAAAC	14	True	NA	NA	False	NA	NA	NA	50025372	49987700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_104475.known	chr19	+	4715	5	FSM	ENSG00000142528.16	ENST00000391821.6	4715	5	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_1	19.421315609402	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCATTGGTTCCTTCTC	28	False	NA	7	True	ATTAAA	-12	NA	50025805	50048772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50026123_50031013_50031092_50039160_50039288_50041729_50041820_50044669
transcript_104478.known	chr19	+	4642	5	FSM	ENSG00000142528.16	ENST00000270617.8	4642	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	21.5058131676066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTTCCTTCTCTCAG	-10	True	NA	11	True	ATTAAA	-16	NA	50026004	50048776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50026123_50030891_50031092_50039160_50039288_50041729_50041820_50044669
transcript_104481.known	chr19	+	2833	4	FSM	ENSG00000142528.16	ENST00000445728.7	2833	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	33.7078955472189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAAAGTTTGTGCGCAT	-10	True	NA	3	True	AATAAA	-16	NA	50026004	50047167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50026123_50039160_50039288_50041729_50041820_50044669
transcript_104482.known	chr19	-	728	7	FSM	ENSG00000161652.13	ENST00000293405.8	814	7	86	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_3	2.06155281280883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-9	True	NA	0	True	AATAAA	-26	NA	50163195	50152547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50152652_50154599_50154727_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_104483.known	chr19	+	6815	42	FSM	ENSG00000105357.20	ENST00000425460.6	6815	42	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	19.3755581754527	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	-9	True	NA	19	True	AATAAA	-17	NA	50203621	50310540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50203672_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_104484.nic	chr19	+	6894	42	NIC	ENSG00000105357.20	novel	5988	40	NA	NA	-33	0	intron_retention	FALSE	canonical	3	34	junction_15	19.0485774949366	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCTCTGTGGCTGTGTG	1794	False	NA	18	True	AATAAA	-16	NA	50205424	50310539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_50205555_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_104485.known	chr19	+	6787	41	FSM	ENSG00000105357.20	ENST00000376970.6	6787	41	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	20.8526826811324	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGTGGCTGTGTGTGT	-3	True	NA	21	True	AATAAA	-19	NA	50203627	50310542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50203672_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_104497.known	chr19	+	3046	24	FSM	ENSG00000105357.20	ENST00000599920.5	3046	24	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	11.955968366641	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAGAAATTTGAAG	6	True	NA	NA	False	NA	NA	NA	50203636	50271482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50203672_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408
transcript_104498.nic	chr19	+	3141	24	NIC	ENSG00000105357.20	novel	5988	40	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_15	12.6085457262451	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAGAAATTTGAAG	1794	False	NA	NA	False	NA	NA	NA	50205424	50271482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_50205555_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408
transcript_1045.known	chr1	-	1047	4	FSM	ENSG00000175756.14	ENST00000338338.10	753	4	-288	-6	-288	0	multi-exon	FALSE	canonical	3	1810	junction_3	845.742408906058	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	20	True	NA	-23	True	AATAAA	-22	NA	1375495	1373729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375153
transcript_104506.nnic	chr19	+	1643	7	NNC	ENSG00000105357.20	novel	6137	42	NA	NA	7810	0	intron_retention	FALSE	canonical	2	4	junction_1	35.6588776541769	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCTCTGTGGCTGTGTG	NA	False	NA	18	True	AATAAA	-16	NA	50292573	50310539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_50292613_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_10452.nic	chr1	+	1232	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	35	1225	0	-333	5prime_fragment	FALSE	canonical	3	294	junction_1	259.589217771985	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	4	True	NA	-6	True	CATAAA	-22	NA	70205716	70250392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364
transcript_104528.known	chr19	+	1828	9	FSM	ENSG00000131408.15	ENST00000593926.5	1828	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	159.349262627726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGCTTTTATTTAAT	761	False	NA	9	True	NA	NA	NA	50377244	50382944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50377329_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_104536.known	chr19	+	2416	10	FSM	ENSG00000131408.15	ENST00000253727.10	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	34.8917196303855	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTAGGCACAATTCT	-27	True	NA	NA	False	AATAAA	-18	NA	50376456	50383388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_104537.known	chr19	+	1830	10	FSM	ENSG00000131408.15	ENST00000599105.5	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	144.895194136833	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTATTTAATAAAAAC	-11	True	NA	15	True	NA	NA	NA	50376472	50382950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379133_50379182_50379779_50379880_50381965_50382175_50382455
transcript_104538.known	chr19	+	1915	10	FSM	ENSG00000131408.15	ENST00000598168.5	1915	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	151.003392979622	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAGGAAAATAAAATAT	-26	True	NA	-25	True	AATAAA	-12	NA	50376457	50382978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379091_50379182_50379779_50379880_50381965_50382175_50382455
transcript_104561.known	chr19	+	3524	28	FSM	ENSG00000062822.16	ENST00000601098.6	3524	28	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	204.699297676215	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	-4	True	NA	-19	True	NA	NA	NA	50384341	50417971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50395024_50395151_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_104574.known	chr19	+	3514	27	FSM	ENSG00000062822.16	ENST00000595904.6	3514	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	164.727105331118	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	1	True	NA	24	True	AATAAA	-18	NA	50384346	50418014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408706_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_104576.known	chr19	+	3341	27	FSM	ENSG00000062822.16	ENST00000613923.6	3341	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	204.09366685929	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACCAGGGAGAATTAATA	-12	True	NA	-15	True	NA	NA	NA	50384333	50417975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409595_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_104581.known	chr19	+	3436	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	91.4059237654119	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	1	True	NA	24	True	AATAAA	-18	NA	50384346	50418014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_104621.known	chr19	+	3474	26	FSM	ENSG00000062822.16	ENST00000600859.5	3474	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_21	172.367867075044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGCTTTGTGGTCT	6480	False	NA	22	True	AATAAA	-16	NA	50384203	50418012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_10468.nic	chr1	+	1232	11	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	7	1570	7	-678	5prime_fragment	FALSE	canonical	3	294	junction_1	271.963398272635	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATGTTAATCATTTA	-24	True	NA	31	True	AAGAAA	-28	NA	70205688	70250047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951
transcript_104699.known	chr19	+	3792	6	FSM	ENSG00000269404.7	ENST00000595883.6	3792	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.762899237659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCGTATGCCTGTA	-1	True	NA	NA	False	AATAAA	-13	NA	50418937	50431314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_104702.known	chr19	+	564	6	FSM	ENSG00000269404.7	ENST00000597855.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.4587389640711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCCGGCGTCTTCCAG	2	True	NA	NA	False	GGGGCT	-45	NA	50418940	50428124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423639_50423756_50428037
transcript_104703.known	chr19	+	847	5	FSM	ENSG00000269404.7	ENST00000596074.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	18.4577219612822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGGACCTATGGA	2	True	NA	NA	False	NA	NA	NA	50418940	50428587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50423604_50423756_50428037
transcript_10471.known	chr1	+	1408	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	0	413	0	-333	5prime_fragment	FALSE	canonical	3	44	junction_9	345.196306469232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	27	False	NA	-6	True	CATAAA	-22	NA	70221395	70250392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364
transcript_104712.known	chr19	+	578	3	FSM	ENSG00000269404.7	ENST00000599923.5	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGAGGCCCCGGGG	0	True	NA	NA	False	NA	NA	NA	50418938	50422975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472
transcript_104714.known	chr19	+	1443	6	FSM	ENSG00000269404.7	ENST00000270632.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.4587389640711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCATGTCT	19	False	NA	21	True	NA	NA	NA	50418957	50428989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423752_50428037
transcript_104717.known	chr19	+	2014	8	FSM	ENSG00000161671.17	ENST00000376918.7	2014	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	35.0731015021425	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	-22	True	NA	-32	True	ATTAAA	-23	NA	50476498	50483351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_104719.known	chr19	+	2178	8	FSM	ENSG00000161671.17	ENST00000601780.5	2178	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	39.6067403045368	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	NA	False	NA	-32	True	ATTAAA	-23	NA	50476399	50483351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476724_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_104721.known	chr19	+	9439	7	FSM	ENSG00000161671.17	ENST00000334976.11	9439	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	11.5998084275369	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGATACACTGATATT	-14	True	NA	6	True	AATAAA	-16	NA	50476506	50490871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_104724.known	chr19	+	1926	7	FSM	ENSG00000161671.17	ENST00000599293.1	1926	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	30.9430480434979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAAACTGTCCCCCAG	13	True	NA	4	True	NA	NA	NA	50476533	50483320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476724_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_104732.known	chr19	-	1225	5	FSM	ENSG00000142530.11	ENST00000595790.5	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	9.25675429078681	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	12	True	NA	NA	False	AATAAA	-22	NA	50476746	50466787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50466956_50467621_50467830_50475324_50475456_50475832_50475934_50476129
transcript_104733.known	chr19	-	1375	5	FSM	ENSG00000142530.11	ENST00000600100.6	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	13.7658998979362	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-1	True	NA	NA	False	AATAAA	-22	NA	50476848	50466787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50466956_50467621_50467830_50475324_50475504_50475832_50475934_50476129
transcript_104735.known	chr19	-	582	5	FSM	ENSG00000161677.12	ENST00000594350.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	15.1739909054935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGGCCCAGGGCCTGTG	-5	True	NA	NA	False	NA	NA	NA	50511159	50506256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511074
transcript_104736.known	chr19	-	802	5	FSM	ENSG00000161677.12	ENST00000601423.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	12.7867118525444	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-8	True	NA	-6	True	AATAAA	-18	NA	50511162	50505997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511116
transcript_104738.known	chr19	-	733	4	FSM	ENSG00000161677.12	ENST00000595669.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	14.3372087784044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGTGTCT	4	True	NA	-10	True	AATAAA	-14	NA	50511220	50506001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50506273_50506377_50506573_50510285_50510449_50511116
transcript_104739.nnic	chr19	-	3059	4	NNC	ENSG00000131409.13	novel	3348	3	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	5.73488351136175	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGGAGGAGAGAAAACAA	-3	True	NA	-2	True	AGTAAA	-25	NA	50568464	50516891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_50519416_50548541_50548874_50567943_50568064_50568381
transcript_104741.nnic	chr19	-	3088	3	NNC	ENSG00000131409.13	novel	3019	3	NA	NA	-5724	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6.5	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGGAGGAGAGAAAACAA	NA	False	NA	-2	True	AGTAAA	-25	NA	50556766	50516891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_50519416_50548541_50548874_50556534
transcript_104746.known	chr19	-	2526	11	FSM	ENSG00000213023.11	ENST00000600079.6	2526	11	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_3	33.2386822843506	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTGTCCTCTCT	-19	True	NA	0	True	AATAAA	-25	NA	50639881	50621976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263_50637427_50639024_50639163_50639789
transcript_104748.nnic	chr19	+	741	5	NNC	ENSG00000235034.7	novel	761	5	NA	NA	4030	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.4699639133399	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTCTCTCTGCAAAAT	4382	False	NA	8	True	TATAAA	-19	NA	50653817	50659306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_50653865_50656049_50656123_50656225_50656347_50657988_50658129_50658946
transcript_104749.nnic	chr19	+	409	2	NNC	ENSG00000235034.7	novel	477	2	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	251	junction_1	0	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTCTCTCTGCAAAAT	4630	False	NA	8	True	TATAAA	-19	NA	50658460	50659306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_50658510_50658946
transcript_104750.known	chr19	+	477	2	FSM	ENSG00000235034.7	ENST00000490451.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTGCAAAATCTTG	4	True	NA	12	True	TATAAA	-23	NA	50658495	50659310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50658609_50658946
transcript_104752.known	chr19	+	1375	4	FSM	ENSG00000105472.14	ENST00000250340.9	1375	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	6.18241233033047	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGGGCAGTGAAGGCA	-2	True	NA	17	True	AATAAA	-17	NA	50723363	50725708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50723673_50723904_50724092_50724409_50724602_50725021
transcript_104753.known	chr19	-	260	2	FSM	ENSG00000268375.1	ENST00000594114.1	260	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCATTGCATCAT	NA	False	NA	NA	False	NA	NA	NA	50793584	50792684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50792792_50793431
transcript_104756.known	chr19	-	971	5	FSM	ENSG00000167747.16	ENST00000597493.6	1570	5	0	599	0	17	multi-exon	FALSE	canonical	3	12	junction_4	1027.86730053057	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGGATAAGTGGGC	338	False	NA	NA	False	NA	NA	NA	50804620	50798302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50804571
transcript_104766.known	chr19	-	1718	4	FSM	ENSG00000167747.16	ENST00000641834.2	1735	4	0	17	0	0	multi-exon	FALSE	canonical	3	1159	junction_3	436.843984354445	2541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-2	True	NA	-25	True	CATAAA	-19	NA	50804929	50797703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804571
transcript_104767.known	chr19	-	912	3	FSM	ENSG00000167748.11	ENST00000596300.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAAGCCTTCTGTCGCC	-11	True	NA	NA	False	GGGGCT	-19	NA	50820849	50819270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50819350_50819898_50820036_50820153
transcript_104768.known	chr19	-	1513	6	FSM	ENSG00000167754.13	ENST00000336334.8	1513	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1.35646599662505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-5	True	NA	-4	True	AATAAA	-14	NA	50953038	50943302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746
transcript_104769.known	chr19	-	1708	6	FSM	ENSG00000167755.15	ENST00000376851.7	1708	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	1.93907194296653	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	0	True	NA	0	True	AATAAA	-19	NA	50968972	50958630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540
transcript_104770.known	chr19	-	1955	6	FSM	ENSG00000169035.12	ENST00000595820.6	1955	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.87054001888146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAGAGAGGTGACCTT	-5	True	NA	NA	False	AATAAA	-28	NA	50983917	50976467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50977692_50979787_50979925_50980239_50980488_50981766_50981915_50982326_50982458_50983850
transcript_104772.known	chr19	-	1054	5	FSM	ENSG00000169035.12	ENST00000597707.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACACAAAACCCTCAGT	20	True	NA	NA	False	GATAAA	-40	NA	50984038	50977358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50977692_50979787_50979925_50980239_50980488_50981766_50981915_50983850
transcript_104773.known	chr19	-	1429	7	FSM	ENSG00000167755.15	ENST00000310157.7	1429	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.13437474581095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	-10	True	NA	0	True	AATAAA	-19	NA	50969591	50958630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540_50968592_50969489
transcript_104774.known	chr19	-	1405	7	FSM	ENSG00000167754.13	ENST00000391809.6	1405	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-1	True	NA	-4	True	AATAAA	-14	NA	50953065	50943302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746_50952815_50952949
transcript_104776.known	chr19	-	2984	6	FSM	ENSG00000129451.12	ENST00000358789.8	2984	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.9068785635488	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTACTTGATAATG	-2	True	NA	NA	False	NA	NA	NA	51019709	51012738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51019042_51019140_51019626
transcript_104784.known	chr19	+	3347	8	FSM	ENSG00000142549.10	ENST00000270642.9	3347	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	6.86011840202455	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGGATTTTCTATC	-14	True	NA	NA	False	AATAAA	-23	NA	51311643	51330891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51311927_51322063_51322143_51323661_51323895_51325345_51325466_51326763_51326899_51327079_51327201_51327731_51327887_51328670
transcript_104785.known	chr19	-	3689	10	FSM	ENSG00000186806.6	ENST00000335624.5	3689	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.7061132303366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGAGGCGGCTGGTTTC	3	True	NA	-5	True	AATAAA	-14	NA	51342139	51331540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887_51339143_51340014_51340300_51340432_51340727_51341152_51342008_51342084
transcript_10479.nic	chr1	+	1404	10	ISM	ENSG00000116754.14	ENST00000370949.2	3959	12	-29	3005	-19	-678	5prime_fragment	FALSE	canonical	3	1054	junction_2	70.4079821512965	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATGTTAATCATTTA	-18	True	NA	31	True	AAGAAA	-28	NA	70221350	70250047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951
transcript_104790.nic	chr19	-	2285	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	533	0	533	0	3prime_fragment	FALSE	canonical	0	0	junction_1	35.466040094716	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGCTGGTTTCAGGCT	2981	False	NA	0	True	AATAAA	-19	NA	51339222	51331535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_104791.nic	chr19	-	2656	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	8	154	8	-149	intron_retention	FALSE	canonical	0	0	junction_1	35.466040094716	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGTGCCAGTGAAGA	2456	False	NA	-5	True	AATAAA	-20	NA	51339747	51331689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_104792.nic	chr19	-	1989	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	546	283	546	-278	3prime_fragment	FALSE	canonical	0	0	junction_1	35.466040094716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCCTGAGACTCTC	2994	False	NA	-14	True	CATAAA	-12	NA	51339209	51331818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_104795.known	chr19	-	872	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	34.3685903115039	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	-21	True	NA	-14	True	AATAAA	-19	NA	51366388	51345168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_104798.known	chr19	-	575	5	FSM	ENSG00000105379.10	ENST00000596253.1	575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	315.606558867207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACGGCCGGCGTCAAG	1	True	NA	-130	True	NA	NA	NA	51366366	51345284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51354149_51354309_51366269
transcript_104800.nic	chr19	-	689	5	ISM	ENSG00000105379.10	ENST00000309244.9	872	6	-30	1731	-30	-1212	5prime_fragment	FALSE	canonical	3	712	junction_2	26.9478663348325	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCCTGGCCAGCGGG	6529	False	NA	NA	False	NA	NA	NA	51366418	51346899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_104804.known	chr19	+	6552	5	FSM	ENSG00000105497.8	ENST00000262259.7	6552	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.27760839478607	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTTATCAAGTGTGAAG	-9	True	NA	9	True	AATAAA	-20	NA	51571282	51592510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51571476_51573149_51573402_51581390_51581518_51581786_51581883_51586626
transcript_104806.known	chr19	+	759	6	FSM	ENSG00000182310.15	ENST00000572160.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	8.16333265278342	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAACTCTAGATTG	9207	False	NA	-3	True	AATAAA	-4	NA	51702535	51705175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51702653_51703020_51703099_51703227_51703338_51704029_51704187_51704269_51704481_51705089
transcript_104807.known	chr19	-	2086	4	FSM	ENSG00000105509.11	ENST00000601714.5	2086	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCCTCCACCTTTTTG	6339	False	NA	-1	True	AATAAA	-18	NA	51719941	51713111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51714103_51716255_51716389_51716967_51717194_51719205
transcript_104813.known	chr19	-	1865	7	FSM	ENSG00000161551.15	ENST00000640955.1	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	16.6299595776886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	-22	True	NA	-9	True	AAAAAG	-41	NA	51887951	51855809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_104814.known	chr19	-	7308	7	FSM	ENSG00000161551.15	ENST00000301399.12	7308	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	31.1394712008195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-22	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887895
transcript_104815.known	chr19	-	8291	6	FSM	ENSG00000161551.15	ENST00000638348.2	8291	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	25.168233946783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-22	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_104817.known	chr19	-	3192	5	FSM	ENSG00000198093.11	ENST00000354957.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	24.4987244565916	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATCTCTATTTCCTGTG	-3	True	NA	-12	True	AATAAA	-15	NA	51905017	51889234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_10483.nic	chr1	+	1101	9	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-48	6802	-48	-5910	5prime_fragment	FALSE	canonical	3	294	junction_1	302.475593023636	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	NA	False	NA	16	True	AAAACA	-3	NA	70205633	70244815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_104831.nic	chr19	+	2277	6	NIC	ENSG00000176024.18	novel	3165	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	35.8719946476356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	NA	False	NA	5	True	AATAAA	-15	NA	51927418	51945752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_51927541_51929731_51929825_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_104833.known	chr19	+	3165	6	FSM	ENSG00000176024.18	ENST00000293471.11	3165	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	20.1851430512642	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGCCATGCTCTTAA	1	True	NA	NA	False	TATAAA	-41	NA	51927471	51946621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51927541_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_104834.known	chr19	+	606	5	FSM	ENSG00000176024.18	ENST00000599683.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.6653333119993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGGCAAAATCATGATAC	-23	True	NA	NA	False	NA	NA	NA	51927447	51944246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51927541_51929731_51929897_51940208_51940336_51940616_51940710_51944118
transcript_104835.known	chr19	-	869	5	FSM	ENSG00000256683.7	ENST00000601430.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.1341198233259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAATTAGAGAAGCATCA	-31	True	NA	NA	False	AAAACA	-1	NA	51986856	51965855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51966215_51968577_51968674_51969004_51969146_51974345_51974532_51986769
transcript_104836.known	chr19	-	1601	2	FSM	ENSG00000256683.7	ENST00000597555.1	1601	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	20	True	NA	NA	False	NA	NA	NA	51986805	51972966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51974532_51986769
transcript_104838.known	chr19	-	4020	6	FSM	ENSG00000197619.15	ENST00000594083.5	4020	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	6.04648658313239	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTTGTGTGAGCACAA	14	True	NA	-5	True	AATAAA	-24	NA	52008196	51991333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_10484.nic	chr1	+	1012	9	NIC	ENSG00000116754.14	novel	3959	12	NA	NA	-27	-5910	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	379.395221866328	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	NA	False	NA	16	True	AAAACA	-3	NA	70221342	70244815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_70221401_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_104840.known	chr19	-	4628	5	FSM	ENSG00000142556.19	ENST00000270649.11	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	18.3762754659371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGCTTTTGCTTTTGC	10	True	NA	-5	True	AATAAA	-17	NA	52028379	52013323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_104842.known	chr19	-	1293	6	FSM	ENSG00000142556.19	ENST00000356322.10	1293	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	64.6250725338084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTCTCTTTTATTC	40	True	NA	-16	True	AATATA	-1	NA	52028349	52012764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52013253_52017116_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_104843.known	chr19	-	4356	4	FSM	ENSG00000204611.7	ENST00000600228.6	4356	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTTTCTGTTTTTTT	-7	True	NA	-21	True	ATTAAA	-1	NA	52139938	52113090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52117025_52123922_52124050_52130500_52130589_52139731
transcript_104845.known	chr19	-	808	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.18544972870135	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTTTCATTTCCCAT	18	False	NA	1	True	AATAAA	-19	NA	52171643	52160320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
transcript_104846.known	chr19	+	294	1	FSM	ENSG00000243680.1	ENST00000492641.1	294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCTATGATTAGTCAT	26	False	NA	-54	True	NA	NA	NA	52143042	52143336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52143000_52143300
transcript_104857.known	chr19	+	2150	6	FSM	ENSG00000167554.15	ENST00000321287.12	2150	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	7.90948797331408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTCTTTTTTTTTTG	-2	True	NA	8	True	AATAAA	-18	NA	52336244	52367122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52336507_52347706_52347832_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_104858.known	chr19	+	2921	6	FSM	ENSG00000167554.15	ENST00000403906.8	2921	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.1773780845922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	-4	True	NA	NA	False	NA	NA	NA	52336242	52367778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_104861.known	chr19	+	4746	5	FSM	ENSG00000198464.14	ENST00000595962.6	4746	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	11.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACACCTTGTAAAACAT	-11	True	NA	8	True	AATAAA	-18	NA	52297168	52325922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52297224_52300393_52300485_52314152_52314280_52315833_52315963_52321578
transcript_104864.known	chr19	+	6282	4	FSM	ENSG00000196214.11	ENST00000439461.6	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	33.1762967593833	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTCTTTGATTTCT	-7	True	NA	8	True	AATAAA	-22	NA	52269586	52296046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52269632_52282110_52282238_52283284_52283414_52290065
transcript_104872.known	chr19	+	554	3	FSM	ENSG00000196214.11	ENST00000593703.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGTAAAACCGTCAG	-7	True	NA	NA	False	GATAAA	-16	NA	52269586	52290445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52269632_52283284_52283414_52290065
transcript_104875.known	chr19	+	953	4	FSM	ENSG00000221923.9	ENST00000600321.5	953	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	13.5728487143349	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGAGACAGGTTTT	1	True	NA	NA	False	NA	NA	NA	52369935	52380075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420
transcript_104877.known	chr19	+	496	4	FSM	ENSG00000221923.9	ENST00000344085.9	496	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.5944690142922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGATTGAAGTTTGTTT	4	True	NA	4	True	AATAAA	-17	NA	52369938	52374717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374395_52374483
transcript_104880.known	chr19	+	5230	4	FSM	ENSG00000167562.14	ENST00000391785.8	5230	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	15.2825245151302	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTAATTTATAATGTA	-2	True	NA	13	True	AATAAA	-16	NA	52570286	52587174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52570331_52574076_52574163_52575894_52576022_52582201
transcript_104884.known	chr19	-	509	5	FSM	ENSG00000167766.20	ENST00000597161.6	2783	5	0	2274	0	-7	multi-exon	FALSE	canonical	2	3	junction_2	31.1046620299916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCAGAAAAATGTACAT	-4	True	NA	NA	False	NA	NA	NA	52638355	52614671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52614798_52616717_52616842_52618935_52619063_52635065_52635154_52638311
transcript_104888.known	chr19	-	728	3	FSM	ENSG00000167766.20	ENST00000601237.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGTCAGGAGATCGAGA	9805	False	NA	NA	False	NA	NA	NA	52638388	52618499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52619063_52635065_52635154_52638311
transcript_104893.known	chr19	-	577	6	FSM	ENSG00000213020.10	ENST00000640952.1	577	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	12.280065146407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTGTCAAGAAGATGAAAG	22	True	NA	NA	False	AAGAAA	-18	NA	52735011	52706709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52729905_52730006_52735000
transcript_104896.known	chr19	-	4417	5	FSM	ENSG00000213020.10	ENST00000540744.5	4417	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	13.1600721882519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTAGTCTGTTTTTCAG	-21	True	NA	-6	True	ACTAAA	-19	NA	52735054	52702812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52735000
transcript_104899.known	chr19	-	3645	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.77123616632825	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	23	False	NA	NA	False	NA	NA	NA	52786807	52764549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
transcript_104902.known	chr19	-	4558	4	FSM	ENSG00000198538.11	ENST00000457749.7	4558	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	59.4661434954565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTCGATTTCT	-1	False	NA	-8	True	AATAAA	-22	NA	52821633	52797407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52801703_52808006_52808134_52817943_52818032_52821585
transcript_104903.known	chr19	-	4405	4	FSM	ENSG00000204604.13	ENST00000595646.6	4405	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	33.95094500403	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGAACAGGGTCTAG	-1	True	NA	NA	False	AATAAA	-21	NA	52857619	52838009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52842152_52849086_52849214_52854257_52854346_52857571
transcript_104907.known	chr19	-	1827	3	FSM	ENSG00000198538.11	ENST00000391783.6	1827	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	46	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATACTGGAGAGAAACC	NA	False	NA	NA	False	NA	NA	NA	52821669	52800047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52801703_52817943_52818032_52821585
transcript_10491.nic	chr1	+	1218	8	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	-45	5990	-19	-5910	5prime_fragment	FALSE	canonical	3	1054	junction_2	76.801891983498	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	-18	True	NA	16	True	AAAACA	-3	NA	70221350	70244815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_104924.known	chr19	-	553	4	FSM	ENSG00000180257.14	ENST00000457013.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	17.7951304200522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGGCAAGAAGTTGAA	NA	False	NA	NA	False	AAGAAA	-20	NA	52962911	52951431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962716
transcript_104925.known	chr19	-	2560	4	FSM	ENSG00000180257.14	ENST00000444460.7	2560	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	11.7284080571728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATTGACATTAGAGTT	-12	True	NA	-25	True	AATAAA	-23	NA	52962881	52949384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962726
transcript_104926.known	chr19	-	2990	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	10.2306728354819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCATTTCATTTCT	6	True	NA	-9	True	AATATA	-17	NA	52993524	52968250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
transcript_104927.known	chr19	-	880	4	FSM	ENSG00000242779.7	ENST00000600425.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.5148527508066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTATTCCTAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	53037898	52970444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_53037769
transcript_104929.known	chr19	-	2341	2	FSM	ENSG00000213801.4	ENST00000313956.4	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	52942601	52927134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52929415_52942540
transcript_10493.nic	chr1	+	885	7	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-48	14067	-48	0	5prime_fragment	FALSE	canonical	3	294	junction_1	322.9169139784	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAACAATGTTTATGCA	NA	False	NA	25	True	NA	NA	NA	70205633	70237550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424
transcript_104931.known	chr19	-	827	4	FSM	ENSG00000242779.7	ENST00000599093.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5134350376268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTTATAAAGAAAAGAT	5	True	NA	NA	False	AAAAAG	-1	NA	52993525	52975372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52975801_52980891_52980973_52986574_52986847_52993479
transcript_104943.known	chr19	-	4336	7	FSM	ENSG00000170949.18	ENST00000429604.5	4336	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	56.6168899024154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-23	True	NA	NA	False	AATAAA	-20	NA	53103434	53066613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_104945.known	chr19	-	1926	6	FSM	ENSG00000170949.18	ENST00000599247.5	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	63.7965516309463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATTCTGGAGAGAA	18	True	NA	NA	False	NA	NA	NA	53103393	53068865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091636_53091721_53103264
transcript_104947.known	chr19	-	583	5	FSM	ENSG00000170949.18	ENST00000596966.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	51.5770055354128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGTGTAAACCATGATAA	-5	True	NA	NA	False	NA	NA	NA	53103416	53085939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53086110_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_104949.known	chr19	-	1728	4	FSM	ENSG00000170949.18	ENST00000597112.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	48.3068893177314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCACCCTGGCTGCCTG	-12	True	NA	NA	False	NA	NA	NA	53103423	53084953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53086322_53091412_53091530_53091636_53091721_53103264
transcript_104950.known	chr19	-	750	2	FSM	ENSG00000170949.18	ENST00000599980.1	750	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCTTTCATTCCCAAG	84	False	NA	NA	False	NA	NA	NA	53103327	53091033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53091721_53103264
transcript_104951.known	chr19	-	2288	4	FSM	ENSG00000170954.12	ENST00000243643.9	2288	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8.25967446224258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-12	True	NA	-1	True	ATTAAA	-23	NA	53132910	53107878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132855
transcript_104953.known	chr19	-	2479	6	FSM	ENSG00000170954.12	ENST00000595193.5	2479	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.419339757008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	3	True	NA	-1	True	ATTAAA	-23	NA	53132895	53107878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53109909_53115209_53115308_53115703_53115812_53116312_53116434_53122661_53122744_53132855
transcript_104955.known	chr19	-	3512	5	FSM	ENSG00000197928.11	ENST00000598513.6	3512	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4676347351721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCGTGTGCCTTCCGTC	-6	True	NA	NA	False	AGTAAA	-27	NA	53254873	53235380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_104959.known	chr19	-	796	5	FSM	ENSG00000197928.11	ENST00000599012.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	44.8964085423322	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTTTAAAGTTCAGT	7	True	NA	NA	False	NA	NA	NA	53254860	53241391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_104960.known	chr19	-	935	5	FSM	ENSG00000197928.11	ENST00000594681.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	47.4894725176012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-11	True	NA	NA	False	AAAAAG	-11	NA	53254831	53241923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_104963.known	chr19	-	701	5	FSM	ENSG00000197928.11	ENST00000598806.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	41.4510253190437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCTGTAATACCAGCT	-12	True	NA	NA	False	AATACA	-23	NA	53254879	53242080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_104966.known	chr19	-	706	4	FSM	ENSG00000197928.11	ENST00000601413.5	706	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	40.4722126896961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACGAGTGGTGGTTC	-1	True	NA	NA	False	TTTAAA	-35	NA	53254821	53243555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254598
transcript_104967.known	chr19	-	719	4	FSM	ENSG00000197928.11	ENST00000601828.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	30.1588387633801	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTCGTAGCTGAACAAA	21	True	NA	NA	False	NA	NA	NA	53254846	53243332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254833
transcript_10497.nic	chr1	+	1002	6	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	-45	13255	-19	0	5prime_fragment	FALSE	canonical	3	1054	junction_2	61.6876000505774	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAACAATGTTTATGCA	-18	True	NA	25	True	NA	NA	NA	70221350	70237550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424
transcript_104972.known	chr19	+	6133	4	FSM	ENSG00000203326.12	ENST00000474037.6	6133	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	14.8398861930347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGATGTAATTCCAT	-8	True	NA	8	True	AATAAA	-28	NA	53365704	53386590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721
transcript_104974.known	chr19	+	4572	4	FSM	ENSG00000196417.13	ENST00000396408.8	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	15.7973274814304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGATGAGTTTGATTTCT	0	True	NA	29	True	AATATA	-22	NA	53395148	53412009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53407697
transcript_104975.known	chr19	+	7588	4	FSM	ENSG00000196417.13	ENST00000594030.2	7588	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	45.18849411078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTAAATTTTATTATT	24	False	NA	23	True	AATAAA	-17	NA	53395172	53430413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061
transcript_104976.known	chr19	+	2059	8	FSM	ENSG00000196417.13	ENST00000504235.5	2059	8	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_5	43.7506851258308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTTTTTAGAATTT	-5	True	NA	NA	False	ATTAAA	-19	NA	53395143	53427321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061_53423503_53425070_53425148_53425329_53425452_53426017_53426937_53427086
transcript_104977.known	chr19	+	1868	4	FSM	ENSG00000203326.12	ENST00000475179.5	1868	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	28.9865869364129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGTCAAATGATG	0	True	NA	-1	True	AATAAA	-19	NA	53365712	53386581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53384969
transcript_10498.known	chr1	+	617	3	FSM	ENSG00000116754.14	ENST00000463877.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAGGTCTGTTATTAT	-15	True	NA	NA	False	NA	NA	NA	70205697	70228727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70205781_70221611_70221840_70228421
transcript_104981.known	chr19	+	938	6	FSM	ENSG00000160336.17	ENST00000610928.4	938	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.369204734793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	6	True	NA	12	True	AATAAA	-22	NA	53431992	53450331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_104987.known	chr19	+	3983	5	FSM	ENSG00000160336.17	ENST00000684525.1	3983	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	98.7379739512615	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	-3	True	NA	21	True	AATATA	-22	NA	53431983	53458261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_104997.known	chr19	+	6153	4	FSM	ENSG00000198346.11	ENST00000396403.9	6153	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	26.5497436689865	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAGAGTACCTTAATT	-9	True	NA	15	True	AATAAA	-18	NA	53467732	53496255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53467790_53483749_53483838_53486631_53486759_53490374
transcript_105.known	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_1	0	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_+_1886_2251
transcript_105003.known	chr19	+	2920	2	FSM	ENSG00000241015.2	ENST00000424846.3	2920	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	-3	True	NA	19	True	NA	NA	NA	53431983	53444670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53432029_53441795
transcript_105011.known	chr19	+	5042	7	FSM	ENSG00000130844.19	ENST00000253144.13	5042	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	18.8716424533979	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	-1	True	NA	14	True	AATAAA	-17	NA	53521023	53580269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53522085_53522616_53522685_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_105020.known	chr19	+	574	6	FSM	ENSG00000130844.19	ENST00000514374.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	66.8921520060463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAGATGATCATCAATT	366	False	NA	NA	False	NA	NA	NA	53537684	53576859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53537756_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_105023.known	chr19	+	4065	6	FSM	ENSG00000130844.19	ENST00000449416.6	4065	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.3656058126173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	-11	True	NA	14	True	AATAAA	-17	NA	53538144	53580269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53538297_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_105027.known	chr19	+	572	3	FSM	ENSG00000130844.19	ENST00000649816.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	71.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCCCAATTTTTAA	585	False	NA	-32	True	NA	NA	NA	53521832	53523515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53522085_53522616_53522685_53523263
transcript_105030.known	chr19	-	3635	10	FSM	ENSG00000142405.22	ENST00000391773.6	3635	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.17785547690558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCGGGCACCTGTA	-2	True	NA	-1	True	AATAAA	-16	NA	53824314	53793742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53794137_53795858_53796030_53798242_53798414_53801226_53801398_53803951_53804123_53805279_53805451_53807494_53807669_53809586_53811289_53814907_53814989_53823885
transcript_105032.known	chr19	-	3465	9	FSM	ENSG00000142405.22	ENST00000391775.7	3465	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3.44374432848898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGCGGGCACCTGTAG	-5	True	NA	0	True	AATAAA	-17	NA	53824317	53793741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53794137_53795858_53796030_53801226_53801398_53803951_53804123_53805279_53805451_53807494_53807666_53809586_53811289_53814907_53814989_53823885
transcript_105036.known	chr19	+	1579	3	FSM	ENSG00000179820.16	ENST00000421337.6	1579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	149.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTCTTTTCTTTTT	-7	True	NA	NA	False	NA	NA	NA	53866152	53874756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53866418_53869753_53869839_53873527
transcript_105038.known	chr19	+	3054	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	122.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	-11	True	NA	15	True	TATAAA	-11	NA	53867882	53876435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53867944_53869753_53869839_53873527
transcript_10504.known	chr1	-	5658	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	22.3619220004801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGTTCAGCATATTA	-9	True	NA	-16	True	AATAAA	-20	NA	70354722	70258998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_105041.known	chr19	+	1492	2	FSM	ENSG00000179820.16	ENST00000391768.2	1492	2	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTTTTTCTTTCCTT	50	False	NA	NA	False	NA	NA	NA	53869438	53874619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53869839_53873527
transcript_105044.known	chr19	+	2997	19	FSM	ENSG00000126583.12	ENST00000682028.1	2997	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	10.0805398640458	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTCCCACCCGGCCA	-22	True	NA	-38	True	NA	NA	NA	53882188	53907594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706_53906892_53906993
transcript_105046.known	chr19	+	3149	18	FSM	ENSG00000126583.12	ENST00000263431.4	3149	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	9.32274073487451	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGATATTTTCTTGT	-14	True	NA	20	True	AATAAA	-21	NA	53882196	53907652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706
transcript_105051.known	chr19	+	2037	16	FSM	ENSG00000126583.12	ENST00000682268.1	2037	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	12.963881448942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAACCAAGGTTCAAA	-14	True	NA	NA	False	AATACA	-4	NA	53882196	53903441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53903358
transcript_105058.nnic	chr19	+	2247	5	NIC	ENSG00000105605.8	novel	2754	6	NA	NA	67	-237	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	3.24037034920393	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTCCGCCTGCCCGGA	-9	True	NA	13	True	AATAAA	-13	NA	53909401	53943713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_53909518_53912802_53913028_53914499_53914587_53915364_53915506_53942035
transcript_105064.nnic	chr19	+	1750	2	Antisense	novelGene_ENSG00000170909.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTAATTTGACCACTTC	822	False	NA	-1	True	AATAAA	-16	NA	54095719	54098156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_54096167_54096853
transcript_105069.nic	chr19	+	1878	14	NIC	ENSG00000105618.14	novel	1833	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	195.97980212317	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	250	False	NA	26	True	ATTAAA	-16	NA	54115731	54131713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54115798_54118247_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_105072.nic	chr19	+	1866	14	NIC	ENSG00000105618.14	novel	1833	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	191.924880521817	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	-11	True	NA	26	True	ATTAAA	-16	NA	54115750	54131713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54115798_54118240_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_105089.known	chr19	-	774	6	FSM	ENSG00000105619.14	ENST00000391757.1	774	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	69.7492652291048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	1	True	NA	-7	True	AATAAA	-16	NA	54115288	54107019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54107170_54108025_54108208_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_105090.known	chr19	-	1180	6	FSM	ENSG00000105619.14	ENST00000391759.6	1180	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	9.49947366963033	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-11	True	NA	-7	True	AATAAA	-16	NA	54115657	54107019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_105095.known	chr19	+	379	4	FSM	ENSG00000170906.16	ENST00000303553.5	379	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	1576.50647530122	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-1	True	NA	18	True	AATAAA	-15	NA	54102884	54106961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102960_54103113_54103189_54105933_54106012_54106810
transcript_105098.known	chr19	+	1833	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	80.0581149862269	3332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	-8	True	NA	26	True	ATTAAA	-16	NA	54115753	54131713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_105099.known	chr19	+	338	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1568.53420605212	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	13	True	NA	22	True	AATAAA	-19	NA	54102868	54106965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
transcript_105100.known	chr19	+	654	5	FSM	ENSG00000170906.16	ENST00000419113.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1369.76421328636	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTTAGTAAACATTCAT	3074	False	NA	NA	False	NA	NA	NA	54102820	54108704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106810_54106979_54108439
transcript_105101.known	chr19	+	435	5	FSM	ENSG00000170906.16	ENST00000391762.5	435	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	1310.10724751831	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-4	True	NA	18	True	AATAAA	-15	NA	54102851	54106961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106352_54106447_54106810
transcript_105102.known	chr19	+	445	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	1338.37401349548	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-1	True	NA	18	True	AATAAA	-15	NA	54102854	54106961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
transcript_105103.known	chr19	-	804	6	FSM	ENSG00000105619.14	ENST00000391758.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	77.6489536310696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	572	False	NA	-7	True	AATAAA	-16	NA	54115074	54107019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115039
transcript_105122.known	chr19	+	2818	18	FSM	ENSG00000088038.19	ENST00000221232.11	2818	18	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	41.9423727244631	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	-3	True	NA	27	True	AATAAA	-14	NA	54137761	54155681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
transcript_105128.nnic	chr19	+	2652	18	NNC	ENSG00000088038.19	novel	2818	18	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	106.662323296807	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	NA	False	NA	27	True	AATAAA	-14	NA	54137702	54155681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148372_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
transcript_105135.nic	chr19	+	3150	17	ISM	ENSG00000088038.19	ENST00000221232.11	2818	18	-59	1195	-46	31	5prime_fragment	FALSE	canonical	3	347	junction_1	43.1942831142039	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTACTTAATGGTGAC	NA	False	NA	13	True	ATTAAA	-14	NA	54137702	54154486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714
transcript_105136.known	chr19	+	4349	17	FSM	ENSG00000088038.19	ENST00000617930.2	4349	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	107.145272294208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	17	True	NA	27	True	AATAAA	-14	NA	54137781	54155681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153083_54153714
transcript_105157.known	chr19	-	2413	15	FSM	ENSG00000167608.12	ENST00000617472.4	2413	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	10.8918617812211	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCTGACTCTCGGGTGA	7877	False	NA	-70	True	NA	NA	NA	54173250	54160164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54165418_54165567_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172102_54173038
transcript_105166.nic	chr19	-	1806	8	ISM	ENSG00000167608.12	ENST00000619895.5	2362	15	-51	3181	39	-181	5prime_fragment	FALSE	canonical	3	19	junction_3	6.5993196928292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATTCTGTCACTGGGC	7916	False	NA	NA	False	AAAAAG	-20	NA	54173211	54163288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_54163888_54164433_54164602_54165418_54165567_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172084_54173038
transcript_105167.nic	chr19	-	1658	7	NIC	ENSG00000167608.12	novel	2362	15	NA	NA	39	-181	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	11.6619037896906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATTCTGTCACTGGGC	7916	False	NA	NA	False	AAAAAG	-20	NA	54173211	54163288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_54163888_54164433_54164602_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172084_54173038
transcript_105184.known	chr19	-	2294	8	FSM	ENSG00000125505.17	ENST00000245615.6	2294	8	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	96.3164427439944	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	15	True	NA	-5	True	AATAAA	-14	NA	54189580	54173414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_105197.known	chr19	-	2471	7	FSM	ENSG00000125505.17	ENST00000431666.6	2471	7	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_4	237.473975182311	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGTCCGTGCAGGTATC	NA	False	NA	-3	True	AATAAA	-16	NA	54189882	54173412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54188216_54188347_54188432_54188512_54189337
transcript_105203.nic	chr19	-	4174	7	NIC	ENSG00000125505.17	novel	2294	8	NA	NA	43	0	intron_retention	FALSE	canonical	3	526	junction_1	66.1983551323008	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	-34	True	NA	-5	True	AATAAA	-14	NA	54189629	54173414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_54174432_54178764_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_105205.nnic	chr19	-	1955	7	NNC	ENSG00000125505.17	novel	2294	8	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.5281036655	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCGTGTCCGTGCAGGT	-4	True	NA	-6	True	AATAAA	-13	NA	54189683	54173415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_54174389_54180993_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_105209.known	chr19	-	1797	7	FSM	ENSG00000125505.17	ENST00000391754.5	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	95.2267761130707	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGCCTGACAGGTAAG	7	True	NA	-43	True	GATAAA	-18	NA	54189672	54178336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_105211.known	chr19	-	2076	6	FSM	ENSG00000125505.17	ENST00000338624.10	2076	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	269.889903479178	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	27	True	NA	-5	True	AATAAA	-14	NA	54189568	54173414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54188216_54188347_54189337
transcript_105214.nic	chr19	-	4014	6	NIC	ENSG00000125505.17	novel	1797	7	NA	NA	-42	436	intron_retention	FALSE	canonical	3	602	junction_2	38.58289776572	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTAGAACTCATAGCC	-27	True	NA	NA	False	NA	NA	NA	54189622	54177900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_105216.nic	chr19	-	3855	6	NIC	ENSG00000125505.17	novel	1797	7	NA	NA	-5	12	intron_retention	FALSE	canonical	3	602	junction_2	38.58289776572	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAAGTGCGTGCTGTGT	NA	False	NA	-31	True	GATAAA	-30	NA	54189887	54178324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_105232.known	chr19	-	564	4	FSM	ENSG00000125505.17	ENST00000491216.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_2	8.64098759787715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAATAACCCACATAGGG	319	False	NA	NA	False	NA	NA	NA	54189360	54186955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54187288_54188216_54188347_54188432_54188512_54189337
transcript_105240.known	chr19	+	2332	5	FSM	ENSG00000170892.13	ENST00000455798.6	2332	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	153.29933952891	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	1413	False	NA	8	True	NA	NA	NA	54189937	54194532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54190163_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_105241.known	chr19	+	2211	5	FSM	ENSG00000170892.13	ENST00000429671.7	2211	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	151.148933175196	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	1743	False	NA	8	True	NA	NA	NA	54190267	54194532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54190372_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_105242.known	chr19	+	1548	5	FSM	ENSG00000170892.13	ENST00000396383.5	1548	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	160.183293448474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	390	False	NA	10	True	AATAAA	-18	NA	54190730	54193666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54191038_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_105243.known	chr19	+	2294	5	FSM	ENSG00000170892.13	ENST00000302937.8	2294	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	136.538456121343	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTATTTTGTCACGTT	1743	False	NA	12	True	NA	NA	NA	54190267	54194536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54190451_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_105249.known	chr19	+	2160	4	FSM	ENSG00000170892.13	ENST00000396388.3	2160	4	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	20.4178571081514	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	20	True	NA	8	True	NA	NA	NA	54191307	54194532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54191608_54191720_54191965_54192115_54192374_54193174
transcript_105256.known	chr19	+	752	6	FSM	ENSG00000170889.14	ENST00000436445.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3543.57736757644	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGGGCCAGGGTGGG	10	True	NA	-99	True	NA	NA	NA	54200870	54207522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_105259.known	chr19	+	944	6	FSM	ENSG00000170889.14	ENST00000445961.5	944	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3613.29038965871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	11	False	NA	26	True	AATAAA	-20	NA	54200871	54207647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_105260.known	chr19	+	476	5	FSM	ENSG00000170889.14	ENST00000626547.2	476	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3045.02307052016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGAACTCACCCAGA	-3	True	NA	NA	False	NA	NA	NA	54200857	54206565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54206552
transcript_105262.known	chr19	+	713	5	FSM	ENSG00000170889.14	ENST00000302907.9	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	4611	junction_1	1388.26411392069	4457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-3	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_105266.known	chr19	+	772	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	3291.45974455104	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	11	False	NA	26	True	AATAAA	-20	NA	54200871	54207647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_105267.known	chr19	+	897	4	FSM	ENSG00000170889.14	ENST00000484121.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	4611	junction_1	1373.63613166742	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTACTCAGTGTGCCCT	9521	False	NA	NA	False	NA	NA	NA	54200808	54206847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275
transcript_105268.known	chr19	+	510	4	FSM	ENSG00000170889.14	ENST00000391751.7	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	2837.48484087972	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	13	False	NA	26	True	AATAAA	-20	NA	54200873	54207647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54207397
transcript_105273.known	chr19	+	1600	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGCGCTTTACAATTG	-2	True	NA	9	True	AATAAA	-3	NA	54201159	54207630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54201282_54201486_54201610_54206275
transcript_105274.known	chr19	+	709	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	405.095050574553	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-7	True	NA	26	True	AATAAA	-20	NA	54201132	54207647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
transcript_105279.known	chr19	+	2056	14	FSM	ENSG00000167614.14	ENST00000376530.8	2056	14	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_12	29.5318502216639	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTCTTCTGATTCTAAA	-11	True	NA	NA	False	TTTAAA	-30	NA	54415463	54436904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54435827_54435874_54436090_54436172_54436332
transcript_105284.known	chr19	+	1763	13	FSM	ENSG00000167614.14	ENST00000376531.3	1763	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_11	28.3768048863073	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTCCTCCTTATTTCT	51	False	NA	22	True	AATAAA	-23	NA	54415525	54436719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54436090_54436172_54436332
transcript_105299.nnic	chr19	+	2453	11	NNC	ENSG00000167614.14	novel	1763	13	NA	NA	15	-135	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	39.6334454722271	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGGGGCTAGGGATGG	9	False	NA	NA	False	NA	NA	NA	54415445	54433576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54432355
transcript_10531.nic	chr1	-	2402	5	ISM	ENSG00000118454.13	ENST00000370944.9	5658	13	-3	53370	-3	-6683	5prime_fragment	FALSE	canonical	3	167	junction_1	21.6607363679077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAATAGAAATTTCACAG	-12	True	NA	NA	False	NA	NA	NA	70354725	70312368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_105315.nic	chr19	+	3685	16	NIC	ENSG00000167615.17	novel	3658	16	NA	NA	-22	0	intron_retention	FALSE	canonical	3	100	junction_15	72.1544639413714	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	561	False	NA	16	True	ATTAAA	-16	NA	54449167	54462016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_105320.known	chr19	+	3658	16	FSM	ENSG00000167615.17	ENST00000326764.10	3658	16	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	84.1642837946517	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	-15	True	NA	16	True	ATTAAA	-16	NA	54449198	54462016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_105326.nic	chr19	+	5928	15	NIC	ENSG00000167615.17	novel	5789	14	NA	NA	-22	0	intron_retention	FALSE	canonical	3	168	junction_1	56.6350652179804	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCACGCTCCTGCTTTG	561	False	NA	15	True	ATTAAA	-15	NA	54449167	54462015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
transcript_105327.nic	chr19	+	3574	15	NIC	ENSG00000167615.17	novel	3658	16	NA	NA	-22	0	intron_retention	FALSE	canonical	3	38	junction_4	96.4751474817875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	561	False	NA	16	True	ATTAAA	-16	NA	54449167	54462016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_105328.nic	chr19	+	5932	15	ISM	ENSG00000167615.17	ENST00000326764.10	3658	16	-31	1	-22	0	intron_retention	FALSE	canonical	3	75	junction_1	73.3693827596404	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCACGCTCCTGCTTTG	561	False	NA	15	True	ATTAAA	-15	NA	54449167	54462015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
transcript_105329.nic	chr19	+	3578	15	NIC	ENSG00000167615.17	novel	3658	16	NA	NA	-22	0	intron_retention	FALSE	canonical	3	38	junction_4	105.512161983966	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	561	False	NA	16	True	ATTAAA	-16	NA	54449167	54462016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_10533.known	chr1	+	689	5	FSM	ENSG00000197568.15	ENST00000525653.1	689	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.4236596587959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAAAGGGCCGGTTCCT	33	True	NA	NA	False	NA	NA	NA	70354854	70367723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355108_70366145_70366329_70366443_70366538_70366932_70366985_70367616
transcript_105332.known	chr19	+	5146	14	FSM	ENSG00000167615.17	ENST00000376514.6	5146	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	88.5640877169527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTCCCAGCCCCTTG	10	True	NA	NA	False	NA	NA	NA	54449223	54461400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
transcript_105338.known	chr19	-	2047	1	FSM	ENSG00000275183.2	ENST00000611161.2	2047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACGTGAGCTGGTGATC	-2	True	NA	-4	True	AATAAA	-28	NA	54463778	54461731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54461700_54463800
transcript_105339.known	chr19	+	5789	14	FSM	ENSG00000167615.17	ENST00000610347.1	5789	14	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	47.4339154125078	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCACGCTCCTGCTTTG	1634	False	NA	15	True	ATTAAA	-15	NA	54451289	54462015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
transcript_10534.nnic	chr1	+	1981	4	NIC	ENSG00000197568.15	novel	1095	4	NA	NA	-971	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	31.6789449880446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	ATTAAA	-22	NA	70353814	70368023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_70355112_70366145_70366329_70366443_70366538_70367616
transcript_105342.known	chr19	+	3540	13	FSM	ENSG00000022556.16	ENST00000448584.7	3540	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.17054158809965	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCTGTTACTTAATAAT	-15	True	NA	NA	False	AATAAA	-19	NA	54966373	55001138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54966468_54969998_54970296_54974499_54974545_54977751_54977824_54981616_54981683_54982161_54983729_54985046_54985218_54986150_54986316_54990021_54990193_54990501_54990673_54994268_54994440_54997316_54997488_55000759
transcript_10536.known	chr1	+	832	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	31	0	-15	0	multi-exon	FALSE	canonical	3	19	junction_2	7.1336448530109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7	True	NA	14	True	ATTAAA	-22	NA	70354828	70368023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
transcript_105360.known	chr19	-	1931	7	FSM	ENSG00000160439.16	ENST00000610356.4	1931	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	5.20949986936259	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACCCGAGTCGTAG	8075	False	NA	-14	True	AAAAAG	-4	NA	55063217	55044323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
transcript_105367.known	chr19	+	2569	20	FSM	ENSG00000131037.15	ENST00000201647.11	2569	20	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	36.4993074726546	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGTGCCAACTGCTGT	-11	True	NA	24	True	TATAAA	-19	NA	55075868	55087923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55075920_55076407_55076462_55078087_55078129_55078998_55079058_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_105370.nic	chr19	+	2756	19	NIC	ENSG00000131037.15	novel	2569	20	NA	NA	-78	0	intron_retention	FALSE	canonical	3	59	junction_1	36.7455800651043	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGGTGTGCCAACTGC	3703	False	NA	21	True	TATAAA	-16	NA	55075774	55087920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55075920_55076407_55076462_55078087_55078129_55078998_55079058_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_10538.known	chr1	+	802	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	13	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	16.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-11	True	NA	14	True	ATTAAA	-22	NA	70354810	70368023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355112_70366443_70366538_70367616
transcript_105385.known	chr19	+	2360	18	FSM	ENSG00000131037.15	ENST00000540810.5	2360	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	43.0023737978398	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGAGAGGGTGCAGTGG	0	True	NA	-51	True	NA	NA	NA	55075902	55087848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55075920_55076407_55076462_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_10539.known	chr1	+	692	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	19	112	7	-108	multi-exon	FALSE	canonical	3	36	junction_1	19	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTACCCAAATCCTATAAA	-17	True	NA	-98	True	NA	NA	NA	70354804	70367911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355108_70366443_70366538_70367616
transcript_10540.known	chr1	+	898	3	FSM	ENSG00000197568.15	ENST00000359875.9	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-10	True	NA	14	True	ATTAAA	-22	NA	70354811	70368023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355209_70366443_70366538_70367616
transcript_105402.known	chr19	+	2198	15	FSM	ENSG00000131037.15	ENST00000245618.5	2198	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	38.7814388593306	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATGGTGTGCCAACTG	-2	True	NA	20	True	TATAAA	-15	NA	55080391	55087919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55080542_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_105409.nic	chr19	+	2351	14	NIC	ENSG00000131037.15	novel	2198	15	NA	NA	-56	0	intron_retention	FALSE	canonical	3	40	junction_1	38.4764586445074	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGGTGTGCCAACTGC	3942	False	NA	21	True	TATAAA	-16	NA	55080335	55087920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55080542_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_10541.known	chr1	+	2090	12	FSM	ENSG00000116761.12	ENST00000370938.8	2090	12	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	27.6877512674456	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAATGGCGTGAAACC	6	True	NA	NA	False	NA	NA	NA	70411267	70439851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_105435.known	chr19	-	2997	22	FSM	ENSG00000125503.13	ENST00000263433.8	2997	22	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_7	41.4827232294435	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGCTCTGTGTTCCCAG	-1	True	NA	-5	True	AATAAA	-17	NA	55117637	55090917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092441_55092545_55092621_55092663_55092782_55092869_55093015_55093077_55093152_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095604_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
transcript_105441.known	chr19	-	967	14	FSM	ENSG00000105048.18	ENST00000291901.12	967	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_13	452.845598515294	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-1	True	NA	-2	True	NA	NA	NA	55149206	55132793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_105444.known	chr19	-	934	13	FSM	ENSG00000105048.18	ENST00000356783.9	934	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_12	441.241139350759	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-1	True	NA	-2	True	NA	NA	NA	55149206	55132793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_105454.known	chr19	-	1065	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_10	315.128608666367	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACCCGCTGGGTTCTCTG	2	True	NA	-43	True	AATAAA	-12	NA	55146949	55132834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
transcript_105457.known	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_9	189.967118662256	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	9	True	NA	-73	True	NA	NA	NA	55146942	55132864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
transcript_10547.known	chr1	+	1196	11	FSM	ENSG00000116761.12	ENST00000346806.2	1196	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	104.561417358412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCAAAATTTTCAAGC	121	False	NA	NA	False	ATTAAA	-16	NA	70411382	70439204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_105485.known	chr19	-	2215	12	FSM	ENSG00000167646.14	ENST00000528412.5	2215	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	14.4936577751263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTCCAAGCGTCTT	8454	False	NA	-2	True	AGTAAA	-19	NA	55166621	55158662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165781_55166001_55166328_55166418_55166511
transcript_105486.known	chr19	-	2118	12	FSM	ENSG00000167646.14	ENST00000524407.7	2118	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	12.1383212585269	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCAAGCGTC	8462	False	55166624	-4	True	AGTAAA	-17	NA	55166613	55158664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166522
transcript_105487.nic	chr19	-	2245	12	NIC	ENSG00000167646.14	novel	2169	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	17	junction_2	12.3903454817461	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCAAGCGTC	8459	False	55166624	-4	True	AGTAAA	-17	NA	55166616	55158664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55159450_55159532_55159721_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166511
transcript_105490.nic	chr19	-	2592	11	NIC	ENSG00000167646.14	novel	2169	12	NA	NA	-23	0	intron_retention	FALSE	canonical	3	17	junction_2	12.8124939024376	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCAAGCGTC	1	True	NA	-4	True	AGTAAA	-17	NA	55166674	55158664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55159450_55159532_55159721_55159898_55160014_55160639_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166511
transcript_105498.known	chr19	-	669	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	101.75061424876	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGACTCCATGTCTAT	9950	False	NA	-6	True	AATAAA	-16	NA	55156725	55151770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
transcript_10550.known	chr1	-	2333	4	FSM	ENSG00000050628.21	ENST00000306666.10	2360	4	28	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGAGTCATCTAATAG	25	False	NA	NA	False	AATAAA	-25	NA	71047788	70970780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_70971734_70974296_70974389_71012304_71012485_71046680
transcript_105501.known	chr19	-	699	4	FSM	ENSG00000129991.13	ENST00000585806.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	17.5941909605289	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	5	True	NA	-2	True	AATAAA	-20	NA	55156481	55151766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200
transcript_105507.known	chr19	+	748	1	FSM	ENSG00000267649.1	ENST00000591484.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTCTTGAGTAA	7289	False	NA	NA	False	AAAACA	-29	NA	55216681	55217429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55216700_55217400
transcript_105508.known	chr19	-	3984	24	FSM	ENSG00000105063.19	ENST00000412770.7	3984	24	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_23	49.1358981187069	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTGGTCAGACCTTAC	-21	True	NA	-17	True	AATAAA	-17	NA	55259017	55229778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239912_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
transcript_10551.known	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	207.628249523036	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	16	True	NA	-10	True	AATAAA	-17	NA	71081011	71063336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_105514.known	chr19	-	1246	3	FSM	ENSG00000180089.6	ENST00000327042.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGAGGACTGTTTGGTC	4	True	NA	-3	True	GATAAA	-22	NA	55228763	55226637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55227564_55228190_55228438_55228690
transcript_105520.known	chr19	-	1768	9	FSM	ENSG00000133265.11	ENST00000255631.9	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	215.916324938621	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTATAGAGCCATTGT	7420	False	NA	-23	True	AATAAA	-14	NA	55280360	55262230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034_55280109_55280217
transcript_105530.known	chr19	-	1635	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	0	0	0	multi-exon	TRUE	canonical	3	523	junction_7	66.385700451903	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCATTGTGTCATTTA	-9	True	NA	-15	True	AATAAA	-22	NA	55280110	55262222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
transcript_105544.known	chr19	+	3277	19	FSM	ENSG00000160469.17	ENST00000309383.6	3277	19	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	11.8065685839873	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATAATAATAAATAGCC	-8	True	NA	81	True	NA	NA	NA	55283996	55312562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55284579_55287006_55287102_55287213_55287300_55289479_55289621_55294016_55294134_55294213_55294248_55294328_55294398_55301511_55301659_55302136_55302169_55302696_55302868_55303310_55303409_55303666_55303827_55304049_55304111_55304550_55304921_55305320_55305370_55305462_55305587_55306251_55306451_55308638_55308729_55311910
transcript_10555.known	chr1	-	2816	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	0	0	0	multi-exon	TRUE	canonical	3	363	junction_1	230.610997350008	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-8	True	NA	-3	True	AATAAA	-22	NA	71081035	71063290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_105554.known	chr19	+	2286	9	FSM	ENSG00000133247.14	ENST00000255613.8	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	28.5295899024154	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCGGTTTTTTGTTT	-17	True	NA	18	True	ATTAAA	-19	NA	55339875	55348121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55339958_55341793_55342047_55342214_55342381_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_105556.nic	chr19	+	2598	9	NIC	ENSG00000133247.14	novel	2286	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	57.6411311478184	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	NA	False	NA	17	True	ATTAAA	-18	NA	55339829	55348120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55339958_55341793_55342047_55342214_55342648_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_105582.known	chr19	+	2077	8	FSM	ENSG00000133247.14	ENST00000445196.5	2077	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	49.5629881657509	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	25	False	NA	17	True	ATTAAA	-18	NA	55339917	55348120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55339958_55341793_55342047_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_105584.nic	chr19	+	2499	8	NIC	ENSG00000133247.14	novel	2077	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	121	junction_2	27.4791200881019	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	NA	False	NA	17	True	ATTAAA	-18	NA	55339829	55348120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55339958_55341793_55342381_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_105586.nic	chr19	+	2766	8	NIC	ENSG00000133247.14	novel	2077	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	19	junction_2	61.0887611160504	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	NA	False	NA	17	True	ATTAAA	-18	NA	55339829	55348120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55339958_55341793_55342648_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_105614.known	chr19	+	1601	4	FSM	ENSG00000133247.14	ENST00000589338.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	37.52628708282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCCGCCTTCATCAA	NA	False	NA	NA	False	NA	NA	NA	55339852	55343818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55339958_55341793_55342047_55342214_55342381_55342741
transcript_10563.nic	chr1	-	1361	9	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	254	665	0	-665	5prime_fragment	FALSE	canonical	3	831	junction_2	105.785085787175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATCATTGGGAATCTGT	-8	True	NA	-13	True	AATAAA	-11	NA	71081035	71066383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_105630.known	chr19	+	713	3	FSM	ENSG00000133247.14	ENST00000498738.1	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	44	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCCCTGCACGCGCT	-17	True	NA	NA	False	NA	NA	NA	55339875	55342785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55339958_55341793_55342381_55342741
transcript_105638.known	chr19	-	2083	8	FSM	ENSG00000160471.13	ENST00000593184.5	2083	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.13392420751187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTCAGAAGGTTCC	3	True	NA	-18	True	TATAAA	-34	NA	55354711	55349707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55350801_55352080_55352327_55352532_55352737_55353311_55353391_55353606_55353775_55353865_55353967_55354409_55354540_55354649
transcript_10564.known	chr1	-	1257	10	FSM	ENSG00000132485.14	ENST00000611683.1	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	190.010590997865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGGCCAACCCCTACG	NA	False	NA	NA	False	ACTAAA	-10	NA	71081289	71065718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_105652.known	chr19	-	479	4	FSM	ENSG00000160471.13	ENST00000589467.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	10.0332779621949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTTCTTCTTAATG	-5	True	NA	NA	False	NA	NA	NA	55354719	55353596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55353775_55353865_55353967_55354409_55354540_55354649
transcript_105658.known	chr19	+	605	5	FSM	ENSG00000160472.5	ENST00000291934.4	605	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.38484800354236	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTCTCTTCTCTGAA	1	True	NA	NA	False	AATACA	-16	NA	55376825	55378246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55376912_55376990_55377027_55377592_55377719_55377801_55377887_55377974
transcript_105661.known	chr19	-	743	5	FSM	ENSG00000108106.14	ENST00000587845.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	4710.21318519661	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCTCCACCGACCCT	464	False	NA	NA	False	NA	NA	NA	55407719	55401578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55401763_55404060_55404148_55404287_55404479_55406814_55406963_55407586
transcript_105664.known	chr19	-	496	4	FSM	ENSG00000108106.14	ENST00000589978.1	496	4	0	0	0	0	multi-exon	FALSE	canonical	2	155	junction_2	4117.10731784668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGCGGGCCGCCTGCTC	412	False	NA	NA	False	NA	NA	NA	55407771	55401713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55401763_55404287_55404402_55406814_55406963_55407586
transcript_105668.known	chr19	-	2559	4	FSM	ENSG00000108106.14	ENST00000264552.14	2559	4	0	0	0	0	multi-exon	FALSE	canonical	3	8824	junction_1	528.676334505968	5618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGACAGAGTTCCTCAA	-3	True	NA	-1	True	AATAAA	-18	NA	55407788	55399744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55401763_55404287_55404479_55406814_55406963_55407586
transcript_105672.known	chr19	+	4209	5	FSM	ENSG00000108107.15	ENST00000344063.7	4209	5	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	945.461791930271	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCATTATGAAATATGC	-1	True	NA	15	True	AATAAA	-17	NA	55385931	55392085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55388242
transcript_105673.known	chr19	+	616	5	FSM	ENSG00000108107.15	ENST00000558815.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	2528.17002741113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACATGCCTATGACTA	-1	True	NA	48	True	TATAAA	-34	NA	55385931	55391803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55391553
transcript_105674.known	chr19	+	444	4	FSM	ENSG00000108107.15	ENST00000558131.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_2	2898.92474318784	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	6	True	NA	33	True	AATAAA	-18	NA	55386349	55388373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55386439_55386569_55386675_55387929_55388049_55388242
transcript_105683.known	chr19	-	1075	6	FSM	ENSG00000063241.8	ENST00000425675.7	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	49.4546256683841	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-10	True	NA	-9	True	AATAAA	-17	NA	55461642	55452984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55455635_55455846_55456348_55456490_55461511
transcript_105684.known	chr19	-	1122	6	FSM	ENSG00000063241.8	ENST00000085068.7	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	106.248011746103	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-13	True	NA	-13	True	AATAAA	-13	NA	55461645	55452988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455379_55455635_55455846_55456348_55456490_55461511
transcript_105685.known	chr19	-	1337	2	FSM	ENSG00000283567.2	ENST00000635964.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCAAAAAGCAAGATTC	-5	True	NA	-13	True	AATAAA	-17	NA	55464751	55463000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55463968_55464381
transcript_105686.known	chr19	+	472	2	FSM	ENSG00000197483.10	ENST00000591164.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAGATCCACCGTAGCG	0	True	NA	NA	False	NA	NA	NA	55476645	55481510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55476808_55481200
transcript_105687.known	chr19	+	3562	3	FSM	ENSG00000197483.10	ENST00000598519.2	3562	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGTTTTCCTGGGG	4	True	NA	19	True	AATAAA	-19	NA	55476616	55484487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55476808_55479833_55479918_55481200
transcript_105689.known	chr19	+	1350	3	FSM	ENSG00000090971.5	ENST00000205194.5	1350	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	8	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	1	True	NA	41	True	AATAAA	-13	NA	55485187	55487566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55485259_55485660_55485781_55486407
transcript_10569.nic	chr1	-	3672	7	NIC	ENSG00000132485.14	novel	2816	10	NA	NA	0	-2159	intron_retention	FALSE	canonical	3	1028	junction_6	56.1337688027448	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGTAGAGAGCAAATTA	-8	True	NA	NA	False	NA	NA	NA	71081035	71067877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_105691.known	chr19	+	1011	2	FSM	ENSG00000090971.5	ENST00000591590.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGCCTGGGGGGCCCCT	8	True	NA	NA	False	GGGGCT	-14	NA	55485194	55486607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55485259_55485660
transcript_105692.known	chr19	+	416	3	FSM	ENSG00000090971.5	ENST00000587400.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	15	True	NA	41	True	AATAAA	-13	NA	55485233	55487566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55485259_55485660_55485719_55487233
transcript_105695.nnic	chr19	-	2138	5	NNC	ENSG00000187550.9	novel	2251	4	NA	NA	-29	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	13.3299474867683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCCCAGTGCTGCTGC	9030	False	NA	-9	True	AATAAA	-14	NA	55537162	55528615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_55529150_55529286_55530324_55531142_55531346_55536041_55536297_55537053
transcript_105696.known	chr19	-	2251	4	FSM	ENSG00000187550.9	ENST00000413299.6	2251	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.62466929133727	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGCTGCTGCGAGTC	6	True	NA	-4	True	AATAAA	-19	NA	55537133	55528610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55530324_55531142_55531346_55536041_55536297_55537053
transcript_105697.nnic	chr19	-	2750	4	NNC	ENSG00000187550.9	novel	2251	4	NA	NA	-18	-2	at_least_one_novel_splicesite	TRUE	canonical	1	9	junction_1	9.20144916122817	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCAGTGCTGCTGCGAG	-12	True	NA	-6	True	AATAAA	-17	NA	55537151	55528612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_55530458_55530793_55531346_55536041_55536297_55537053
transcript_105698.nic	chr19	-	3083	3	NIC	ENSG00000187550.9	novel	2251	4	NA	NA	-18	-5	intron_retention	FALSE	canonical	3	28	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCCCAGTGCTGCTGC	-12	True	NA	-9	True	AATAAA	-14	NA	55537151	55528615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55531346_55536041_55536297_55537053
transcript_10570.nic	chr1	-	2752	7	NIC	ENSG00000132485.14	novel	2816	10	NA	NA	0	-3079	intron_retention	FALSE	canonical	3	1028	junction_6	56.1337688027448	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGTAGTTCAAATAAA	-8	True	NA	NA	False	NA	NA	NA	71081035	71068797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_105702.nnic	chr19	-	3586	4	NNC	ENSG00000231274.5	novel	1270	4	NA	NA	-4954	1517	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	1.69967317119759	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGACTTCACATCAGT	8874	False	NA	NA	False	AATAAA	-18	NA	55550497	55539138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_55541527_55544099_55544303_55544798_55544950_55549653
transcript_105709.known	chr19	-	2922	2	FSM	ENSG00000218891.5	ENST00000325421.7	2922	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACACTCTTCACTCTTTT	7	True	NA	-3	True	AATAAA	-21	NA	55580848	55576773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55579642_55580794
transcript_105711.known	chr19	-	2645	3	FSM	ENSG00000179943.8	ENST00000221665.5	2645	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	11	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGCCTCATTTTCTGA	5	True	NA	-7	True	AATAAA	-17	NA	55599517	55591375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55593647_55597571_55597902_55599473
transcript_105712.known	chr19	+	1185	2	FSM	ENSG00000171443.7	ENST00000301073.4	1185	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGTGTTCCGTGC	0	True	NA	28	True	AATAAA	-16	NA	55600287	55603138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55600409_55602074
transcript_105713.known	chr19	+	3763	2	FSM	ENSG00000261221.4	ENST00000568956.2	3763	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGTCCATCCTTGCAT	-9	True	NA	23	True	AATAAA	-17	NA	55605646	55617269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55605733_55613592
transcript_105715.known	chr19	-	1559	2	FSM	ENSG00000179922.6	ENST00000591479.1	1559	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCCCATCACCTCAAAGC	0	True	NA	NA	False	NA	NA	NA	55624566	55621205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55622645_55624446
transcript_105716.known	chr19	-	1987	2	FSM	ENSG00000179922.6	ENST00000325351.5	1987	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTCGGTCTTGTATT	0	True	NA	-17	True	ATTAAA	-17	NA	55624566	55620740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55622645_55624483
transcript_105718.known	chr19	+	1546	6	FSM	ENSG00000173581.8	ENST00000308964.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	40.00799920016	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	17	True	NA	16	True	AATAAA	-1	NA	55648034	55653161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55648278_55649001_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_105720.known	chr19	+	1592	6	FSM	ENSG00000173581.8	ENST00000591578.5	1592	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	78.2493450451823	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	-6	True	NA	16	True	AATAAA	-1	NA	55648232	55653161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55648278_55648757_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_105721.known	chr19	+	1404	6	FSM	ENSG00000173581.8	ENST00000588740.5	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	74.3220021258846	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	-6	True	NA	16	True	AATAAA	-1	NA	55648232	55653161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55648278_55648945_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_105724.known	chr19	+	2093	5	FSM	ENSG00000173581.8	ENST00000586790.6	2093	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	16.1767580188368	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	-27	True	NA	16	True	AATAAA	-1	NA	55648211	55653161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_105728.known	chr19	+	591	2	FSM	ENSG00000171425.10	ENST00000585995.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGGCGGCCCCACGGCT	-1	True	NA	NA	False	NA	NA	NA	55641030	55644990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55641184_55644552
transcript_105729.known	chr19	+	1100	2	FSM	ENSG00000171425.10	ENST00000588537.1	1100	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTCGAGGTTTGTTTT	183	False	NA	16	True	AATAAA	-16	NA	55643809	55645621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55643841_55644552
transcript_105730.known	chr19	+	1156	2	FSM	ENSG00000213015.9	ENST00000325333.10	1156	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTCTTCCTTGCG	-30	True	NA	15	True	AATAAA	-15	NA	55641001	55643470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55641184_55642496
transcript_105731.known	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	22	True	NA	18	True	AATAAA	-18	NA	55643648	55645623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55643775_55644552
transcript_105735.known	chr19	+	2146	12	FSM	ENSG00000063244.13	ENST00000308924.9	2146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.8793975019372	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	-6	True	NA	33	True	ATTAAA	-23	NA	55655034	55674716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669182_55669443_55669693_55673933
transcript_105749.nnic	chr19	+	2402	12	NNC	ENSG00000063245.15	novel	16219	11	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	177.867812371114	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	-12	True	NA	33	True	AATAAA	-23	NA	55675201	55695766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55691813_55691886_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_10575.known	chr1	+	4692	4	FSM	ENSG00000254685.8	ENST00000370898.9	4692	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	4.08248290463863	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATACTCTGAAATTGTCA	-23	True	NA	NA	False	AATAAA	-16	NA	74198241	74208702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390
transcript_10576.known	chr1	-	2301	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	128.472603603038	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGCTTTTCTAGTTT	NA	False	NA	-27	True	AATAAA	-15	NA	74733408	74705489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
transcript_105760.nnic	chr19	+	2725	12	NNC	ENSG00000063245.15	novel	16219	11	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	220.473907303456	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	616	False	NA	33	True	AATAAA	-23	NA	55675125	55695766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_55675436_55677045_55677219_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_10577.known	chr1	-	1908	9	FSM	ENSG00000116791.14	ENST00000340866.10	1908	9	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	29.8137447329248	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTTCTAGTTTTTAT	-19	True	NA	-23	True	AATAAA	-19	NA	74733050	74705485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_105781.known	chr19	+	16219	11	FSM	ENSG00000063245.15	ENST00000270460.11	16219	11	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_8	69.7793665778072	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAAACGTTCTTGTCT	12	True	NA	NA	False	ATTAAA	-21	NA	55675225	55709533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_105785.nic	chr19	+	2563	11	NIC	ENSG00000063245.15	novel	16219	11	NA	NA	-114	0	combination_of_known_junctions	TRUE	canonical	3	249	junction_8	109.583575411646	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	602	False	NA	33	True	AATAAA	-23	NA	55675111	55695766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692953_55693038_55694725_55694984_55695147
transcript_10579.known	chr1	-	1292	8	FSM	ENSG00000116791.14	ENST00000370871.7	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	115.046219638288	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACTGCTCAGTTTCC	9	True	NA	NA	False	ATTAAA	-15	NA	74733022	74705971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_74706458_74706898_74706995_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_105793.nnic	chr19	+	2494	11	NNC	ENSG00000063245.15	novel	16219	11	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	175.305904064866	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	-10	True	NA	33	True	AATAAA	-23	NA	55675203	55695766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_55675436_55678506_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_105804.known	chr19	+	2355	10	FSM	ENSG00000063245.15	ENST00000085079.11	2355	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	199.634666328271	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	-20	True	NA	33	True	AATAAA	-23	NA	55675244	55695766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689866_55689951_55691753_55692058_55692685_55692797_55692953_55693038_55694725_55694984_55695147
transcript_105825.known	chr19	-	1657	2	FSM	ENSG00000142409.6	ENST00000587279.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGAAAAAGCCCTA	12	True	NA	NA	False	NA	NA	NA	56121250	56101649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56103228_56121171
transcript_10583.nic	chr1	+	1811	7	NIC	ENSG00000162623.16	novel	1130	7	NA	NA	-506	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	52.8669714156832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAGTCTTAGTGTCC	162	False	NA	NA	False	AATAAA	-17	NA	74732645	74766678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893_74764151_74766283
transcript_105836.nnic	chr19	+	1885	5	NNC	ENSG00000167685.15	novel	5565	2	NA	NA	-1113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.610692113363	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	NA	False	NA	22	True	AATAAA	-22	NA	56139837	56160893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_56139851_56146246_56146421_56146889_56147209_56158493_56158603_56159623
transcript_105839.known	chr19	+	1906	5	FSM	ENSG00000167685.15	ENST00000592949.5	1906	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	94.1966029111454	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	-4	True	NA	22	True	AATAAA	-22	NA	56141320	56160893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56141358_56146246_56146421_56146889_56147209_56158493_56158603_56159626
transcript_105841.nic	chr19	+	1988	5	NIC	ENSG00000167685.15	novel	562	3	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	136.930639376292	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	354	False	NA	22	True	AATAAA	-22	NA	56141678	56160893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_56141795_56146246_56146421_56146889_56147209_56158493_56158603_56159623
transcript_105846.known	chr19	-	2151	6	FSM	ENSG00000131848.10	ENST00000683990.1	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	14.2632394637403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	16	True	NA	-6	True	AATAAA	-30	NA	56314839	56221302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225174_56313282_56313385_56314680
transcript_10585.known	chr1	+	3437	6	FSM	ENSG00000162623.16	ENST00000370867.8	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.3385574521497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTAGTCTTAGTGTC	-13	True	NA	NA	False	AATAAA	-16	NA	74733151	74766677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_105853.nic	chr19	-	2044	6	NIC	ENSG00000131848.10	novel	2151	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	13.1666244725062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTGTATAACGGAAAAC	-11	True	NA	-15	True	AATAAA	-21	NA	56314866	56221311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225049_56313282_56313385_56314680
transcript_105858.known	chr19	-	314	3	FSM	ENSG00000131848.10	ENST00000585670.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	62	False	NA	NA	False	AATAAA	-18	NA	56314793	56280601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56280701_56313282_56313385_56314680
transcript_105861.known	chr19	-	686	3	FSM	ENSG00000131848.10	ENST00000591078.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGTGTTCCTCTACA	-4	True	NA	NA	False	AATAAA	-7	NA	56314859	56274503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56274909_56313282_56313385_56314680
transcript_105864.known	chr19	+	980	6	FSM	ENSG00000240225.10	ENST00000468396.5	980	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59.8150482738249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACAAATGTAAGGAATGC	-33	True	NA	NA	False	NA	NA	NA	56368172	56377208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56369278_56369338_56373156_56373284_56373530_56373624_56376866
transcript_105867.known	chr19	+	1989	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	52.5714751552589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTTCGGGTGCATT	-11	True	NA	7	True	ATTAAA	-14	NA	56368318	56378350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_105871.known	chr19	+	3440	6	FSM	ENSG00000240225.10	ENST00000490123.5	3440	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	61.8469077642529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTAGCTTATTTGCAT	7	True	NA	15	True	AATAAA	-22	NA	56368138	56379553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374826_56376866
transcript_105874.known	chr19	+	3393	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	23.2849200127464	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	-9	True	NA	25	True	AATAGA	-20	NA	56368320	56379828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_105883.known	chr19	-	733	5	FSM	ENSG00000018869.18	ENST00000587778.5	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	12.5099960031968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACTCCTTATTAAT	264	False	NA	0	True	AATAAA	-20	NA	56393328	56384872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_105885.known	chr19	-	712	5	FSM	ENSG00000018869.18	ENST00000593145.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	16.5378354085412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGGCAAAAGGAACTC	-8	True	NA	-9	True	AATAAA	-11	NA	56393538	56384881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_105889.known	chr19	+	4916	5	FSM	ENSG00000198440.9	ENST00000333201.13	4916	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.96074487943871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCAGACACGTGT	0	True	NA	NA	False	AATATA	-18	NA	56404331	56427364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56404453_56407025_56407124_56413958_56414086_56414344_56414441_56422890
transcript_10589.nic	chr1	+	698	5	ISM	ENSG00000162623.16	ENST00000370867.8	3437	6	-76	14283	-76	0	5prime_fragment	FALSE	canonical	3	135	junction_4	13.6473440639562	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGGAGGAAAACAAGAAA	592	False	NA	NA	False	AATATA	-31	NA	74733075	74752394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291
transcript_105895.known	chr19	+	778	4	FSM	ENSG00000198440.9	ENST00000436972.3	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.32049379893857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCACTTGAGCCCAGGA	24	True	NA	NA	False	NA	NA	NA	56404355	56414800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56404453_56407025_56407124_56413958_56414086_56414344
transcript_105896.known	chr19	+	818	3	FSM	ENSG00000166770.12	ENST00000685306.1	1083	3	260	5	3	0	multi-exon	FALSE	canonical	3	39	junction_2	35.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-23	True	NA	23	True	AATAAA	-19	NA	56478133	56495437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56478382_56494162_56494343_56495047
transcript_105898.known	chr19	+	1503	2	FSM	ENSG00000166770.12	ENST00000654382.1	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-3	True	NA	23	True	AATAAA	-19	NA	56478153	56495437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56478382_56494162
transcript_105899.known	chr19	+	705	3	FSM	ENSG00000166770.12	ENST00000592146.4	730	3	24	1	-3	1	multi-exon	FALSE	canonical	3	10	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTCCTTATTCTTT	-11	True	NA	27	True	AATAAA	-23	NA	56478145	56495441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56478277_56494162_56494343_56495047
transcript_10590.known	chr1	+	3335	5	FSM	ENSG00000162623.16	ENST00000457880.6	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	60.0765137137634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTAGTCTTAGT	-13	True	NA	NA	False	AATAAA	-13	NA	74733151	74766674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_74733419_74736541_74736623_74748750_74748823_74752291_74752426_74763893
transcript_105900.known	chr19	+	4094	8	FSM	ENSG00000196867.8	ENST00000301318.8	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	7.77751862218069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAATATTGTTAAAATG	NA	False	NA	NA	False	AATAAA	-41	NA	56538947	56556808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56539227_56539624_56539717_56547507_56547635_56547806_56547903_56548957_56549122_56550066_56550182_56550509_56550606_56553683
transcript_105904.known	chr19	-	2045	2	FSM	ENSG00000269696.3	ENST00000596587.2	2075	2	30	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCCCTCACCATGCTG	8	True	NA	NA	False	AATAAA	-24	NA	56567411	56545565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56547272_56567072
transcript_105906.known	chr19	+	3475	7	FSM	ENSG00000196867.8	ENST00000591844.5	3475	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	5.01386965216377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTGCCAAAAAGAG	NA	False	NA	NA	False	AATAAA	-6	NA	56538952	56553116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56539227_56539624_56539717_56547507_56547635_56547806_56547903_56548957_56549122_56550066_56550182_56550509
transcript_105907.known	chr19	+	7194	6	FSM	ENSG00000197016.12	ENST00000330619.13	7194	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	8.50881895447306	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTATATTGT	-3	True	NA	11	True	AATAAA	-19	NA	56567467	56582894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56568039_56568757_56568884_56570279_56570372_56574393_56574521_56574637_56574734_56576712
transcript_105908.known	chr19	+	3558	4	FSM	ENSG00000197951.10	ENST00000599599.7	3558	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	50.4997249717483	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATGGAGTGTTAAAACA	3	True	NA	NA	False	AATAAA	-22	NA	56595301	56624486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56595429_56601506_56601592_56613811_56613939_56621267
transcript_105909.known	chr19	+	5428	3	FSM	ENSG00000197951.10	ENST00000328070.10	5428	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	10.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTCAGTCAAGGTGGC	1	True	NA	NA	False	NA	NA	NA	56595299	56626481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56595429_56601506_56601592_56621267
transcript_105910.nnic	chr19	+	2305	3	NNC	ENSG00000197951.10	novel	5428	3	NA	NA	-30	-1056	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	49	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATGTTATTTTAAACAG	3	True	NA	9	True	AATAAA	-17	NA	56595269	56623430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_56595327_56601506_56601592_56621267
transcript_105911.known	chr19	-	507	2	FSM	ENSG00000127903.14	ENST00000601659.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCCTGACAGCCGCCAG	NA	False	NA	NA	False	NA	NA	NA	56671783	56664921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56665246_56671600
transcript_105912.known	chr19	-	3448	2	FSM	ENSG00000127903.14	ENST00000537055.4	3448	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACTATAATCATTGGAA	4	True	NA	NA	False	ATTAAA	-21	NA	56671757	56661979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56665246_56671575
transcript_105913.known	chr19	+	12163	4	FSM	ENSG00000083844.10	ENST00000263095.10	12163	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	7.31816613336672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTGCCTGAGTTTTA	-1	True	NA	21	True	ATTAAA	-38	NA	57191499	57222846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57191947_57193874_57194002_57205396_57205493_57211353
transcript_105915.known	chr19	+	774	3	FSM	ENSG00000083844.10	ENST00000600531.5	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTGTCCGTTTCAAGT	0	True	NA	28	True	AATAAA	-40	NA	57191500	57194969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57191947_57193874_57194002_57194768
transcript_105917.known	chr19	+	1287	7	FSM	ENSG00000105146.14	ENST00000302804.12	1287	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.81894409826699	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCATAGTTGTGTGAG	0	True	NA	9	True	AATAAA	-21	NA	57231022	57235548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57231307_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_105918.known	chr19	+	10169	4	FSM	ENSG00000204524.7	ENST00000414468.3	10169	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGATGGATCTGTC	0	True	NA	25	True	ATTAAA	-43	NA	57240631	57262728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57240922_57243922_57244050_57248604_57248701_57253072
transcript_105919.known	chr19	+	3850	3	FSM	ENSG00000197714.9	ENST00000360338.4	3850	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATAGATATATTTGTTTT	12	True	NA	NA	False	AATAAA	-26	NA	57280484	57294069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57280837_57284550_57284678_57290698
transcript_105924.known	chr19	+	3690	4	FSM	ENSG00000178229.8	ENST00000321545.5	3690	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	9.46337971105226	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAAAGCCTTTTTTAT	-20	True	NA	21	True	ATTAAA	-43	NA	57320471	57330770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57320872_57323681_57323809_57326632_57326729_57327703
transcript_105927.known	chr19	+	4423	3	FSM	ENSG00000131845.15	ENST00000282286.6	4423	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCTGAATGATATTCC	-16	True	NA	22	True	AATAAA	-23	NA	57351270	57359898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57351698_57353724_57353852_57356029
transcript_105928.known	chr19	+	4987	4	FSM	ENSG00000188785.12	ENST00000336128.12	4987	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	15.4128373622625	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGTGTTCTCTATCT	-23	True	NA	NA	False	ATTAAA	-15	NA	57389853	57402992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57390115_57394187_57394224_57397047_57397175_57398429
transcript_105929.known	chr19	+	2714	4	FSM	ENSG00000186272.13	ENST00000307658.12	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGGAAGTGTCCTGAG	-7	True	NA	32	True	AATAAA	-26	NA	57411160	57421934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57411407_57413595_57413637_57417911_57418039_57419634
transcript_10593.known	chr1	+	1332	12	FSM	ENSG00000117054.15	ENST00000420607.6	1332	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	188.515952807209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGCTCCAGAAAAAAGAA	57	False	NA	NA	False	NA	NA	NA	75724779	75762809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75728388_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_105930.known	chr19	+	4207	3	FSM	ENSG00000186230.7	ENST00000334181.5	4207	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTTACTTCATGAACTT	-11	True	NA	NA	False	AATAAA	-21	NA	57435324	57447101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57435594_57441884_57442012_57443290
transcript_105933.known	chr19	-	737	3	FSM	ENSG00000197128.13	ENST00000600175.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	23	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCAGTTAGGTCACA	-10	True	NA	NA	False	NA	NA	NA	57477551	57466662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57467086_57476633_57476673_57477276
transcript_105934.known	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	18	True	NA	57	True	AATGAA	-21	NA	57363550	57365405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57363704_57364814
transcript_105936.nnic	chr19	+	634	2	NIC	ENSG00000186230.7	novel	677	2	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	6	False	NA	13	True	TTTAAA	-4	NA	57435315	57438457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_57435594_57438101
transcript_105937.known	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	11	True	NA	13	True	TTTAAA	-4	NA	57435346	57438457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57435668_57438101
transcript_105938.known	chr19	+	1743	1	FSM	ENSG00000256060.3	ENST00000596755.1	1743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACATTGTAAATTACT	34	True	NA	29	True	AATAAA	-32	NA	57363566	57365309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57363600_57365300
transcript_105939.known	chr19	+	2323	5	FSM	ENSG00000105136.22	ENST00000424930.6	2323	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	18.7799760383234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTTCCCATACACC	1	True	NA	3	True	NA	NA	NA	57487721	57494648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112_57492212_57492855
transcript_105940.known	chr19	+	3742	5	FSM	ENSG00000105136.22	ENST00000221735.12	3742	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.92678553567856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTAGCTTTTTATTGCT	-12	True	NA	NA	False	AATAAA	-25	NA	57487749	57496098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57490146_57490186_57491470_57491598_57492112_57492212_57492855
transcript_105942.known	chr19	+	746	4	FSM	ENSG00000105136.22	ENST00000518999.5	746	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	21.1397466609439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTTGAGCATCAGCTA	9	True	NA	NA	False	NA	NA	NA	57487770	57492476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112
transcript_105943.known	chr19	+	3654	4	FSM	ENSG00000105136.22	ENST00000347466.10	3654	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	21.4527905462721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTAGCTTTTTATTGC	-21	True	NA	NA	False	AATAAA	-24	NA	57487740	57496097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492855
transcript_105946.known	chr19	+	1857	4	FSM	ENSG00000105136.22	ENST00000442920.6	1857	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	22.9927524813074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTGGACAATGTAGT	-3	True	NA	NA	False	NA	NA	NA	57487717	57494220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57491470_57491598_57492112_57492212_57492855
transcript_105948.known	chr19	+	2277	4	FSM	ENSG00000152439.13	ENST00000282292.9	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	21.6384431561566	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACTGGAGGCAGGAT	18	True	NA	NA	False	NA	NA	NA	57499937	57508229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57500114_57504656_57504787_57505301_57505401_57506357
transcript_10595.known	chr1	+	2030	11	FSM	ENSG00000117054.15	ENST00000679704.1	2030	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	278.467592369381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	44	True	NA	-66	True	AAAAAG	-19	NA	75724766	75763596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733050_75733150_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_105951.known	chr19	+	568	3	FSM	ENSG00000105136.22	ENST00000520540.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATACCAAGGCAAGGGG	-3	True	NA	NA	False	NA	NA	NA	57487717	57492284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57491467_57491598_57492112
transcript_105953.known	chr19	-	4305	6	FSM	ENSG00000251369.9	ENST00000447310.5	4305	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	23.7907545067406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTGACTTGTTAGG	-12	True	NA	-4	True	ATTAAA	-17	NA	57559863	57541839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57543244_57543650_57544584_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_105954.known	chr19	-	3376	5	FSM	ENSG00000251369.9	ENST00000457177.5	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	14.5086181285469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTGTTAGGATTT	-12	True	NA	0	True	ATTAAA	-21	NA	57559863	57541835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57543244_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_105957.known	chr19	+	4090	4	FSM	ENSG00000121406.9	ENST00000376233.8	4090	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	4.71404520791032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTAATTTGTCTGTT	14	True	NA	3	True	AATGAA	-17	NA	57527355	57540876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57537203
transcript_105958.known	chr19	+	5505	4	FSM	ENSG00000121406.9	ENST00000602149.1	5505	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	31.8468557666565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGCTGGTGTGGGTC	84	False	NA	NA	False	AATAAA	-18	NA	57527425	57557542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57552384
transcript_10596.known	chr1	+	1451	11	FSM	ENSG00000117054.15	ENST00000526196.5	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	164.372777551515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGTGTTTTCTTTA	-17	True	NA	NA	False	NA	NA	NA	75724705	75762954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_105962.known	chr19	+	4291	4	FSM	ENSG00000171649.12	ENST00000597850.2	4291	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	62.8985073131487	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	-6	True	NA	18	True	AATAAA	-18	NA	57584144	57593890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584390_57584951_57584991_57588538_57588666_57590010
transcript_105965.nic	chr19	+	3027	4	NIC	ENSG00000171649.12	novel	4291	4	NA	NA	-40	-562	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	64.3238334954903	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTAGTCTTGGGGTTC	NA	False	NA	6	True	AATAAA	-18	NA	57583569	57591828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_57584613_57584951_57584991_57588538_57588666_57590010
transcript_105966.nic	chr19	+	5089	4	NIC	ENSG00000171649.12	novel	4291	4	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	64.3238334954903	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	NA	False	NA	18	True	AATAAA	-18	NA	57583569	57593890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_57584613_57584951_57584991_57588538_57588666_57590010
transcript_105969.known	chr19	-	2545	4	FSM	ENSG00000083817.9	ENST00000196489.4	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	9.89949493661167	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTTAGGGTTTGG	-15	True	NA	0	True	AATAAA	-20	NA	57578911	57571565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57573702_57575803_57575931_57578056_57578099_57578671
transcript_105970.known	chr19	+	4144	3	FSM	ENSG00000171649.12	ENST00000536878.6	4144	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTGCCACCTGTATAT	-11	True	NA	-95	True	NA	NA	NA	57584139	57593777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584390_57588538_57588666_57590010
transcript_105972.known	chr19	+	534	3	FSM	ENSG00000171649.12	ENST00000598689.1	534	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAGCATCACAGTGCA	-6	True	NA	NA	False	NA	NA	NA	57584144	57590214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584390_57588580_57588666_57590010
transcript_105973.known	chr19	+	2860	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	74	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	109	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584613_57588538_57588666_57590010
transcript_105975.known	chr19	+	2510	2	FSM	ENSG00000171649.12	ENST00000307468.4	2510	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	109	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584390_57590010
transcript_105977.known	chr19	+	4845	4	FSM	ENSG00000183647.11	ENST00000597700.6	4845	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	-14	True	NA	11	True	AATAAA	-21	NA	57599884	57610098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57605685
transcript_105979.known	chr19	+	634	4	FSM	ENSG00000183647.11	ENST00000597864.1	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.53197264742181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	4	True	NA	5	True	AATAAA	-29	NA	57599902	57612722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57612502
transcript_105982.known	chr19	+	4924	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	3.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	0	True	NA	16	True	AATAAA	-21	NA	57614241	57624724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57614504_57619411_57619509_57620159
transcript_105985.known	chr19	+	559	2	FSM	ENSG00000213762.12	ENST00000597975.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGGCCTCAATTGTG	-9	True	NA	NA	False	NA	NA	NA	57614232	57620447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57614504_57620159
transcript_105989.known	chr19	+	2641	5	FSM	ENSG00000121417.14	ENST00000535785.1	2641	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	31.886517527005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	29	False	NA	15	True	AATAAA	-16	NA	57633215	57642764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57633712_57633906_57634022_57634062_57634628_57634756_57640703
transcript_105991.nic	chr19	+	2619	5	NIC	ENSG00000121417.14	novel	2759	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	30.9313756564431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCTTGGCATTTGA	-19	True	NA	18	True	AATAAA	-19	NA	57633167	57642767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57640703
transcript_105993.known	chr19	+	3773	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	28.2881993457028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	-19	True	NA	4	True	AATAAA	-16	NA	57633167	57644041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
transcript_105996.known	chr19	+	2472	3	FSM	ENSG00000121417.14	ENST00000347302.7	2472	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	-19	True	NA	30	True	AATAAA	-31	NA	57633167	57642779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57634628_57634756_57640703
transcript_106.known	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2863	junction_1	0	532	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_4104_5007
transcript_1060.known	chr1	-	1072	3	FSM	ENSG00000175756.14	ENST00000338370.7	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	3505	junction_2	92	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	29	True	NA	-23	True	AATAAA	-22	NA	1375157	1373729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704
transcript_106000.known	chr19	-	2567	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	11.5108644332213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-12	True	NA	-2	True	NA	NA	NA	57709194	57697366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
transcript_106003.known	chr19	-	5687	4	FSM	ENSG00000179909.16	ENST00000512439.6	5687	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.6144555520604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	14	True	NA	-2	True	NA	NA	NA	57709168	57697366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57701146_57701237_57702789_57704852_57704980_57708938
transcript_106004.known	chr19	-	2431	4	FSM	ENSG00000083814.13	ENST00000317398.10	2431	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	2.35702260395516	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-13	True	NA	-2	True	AATAAA	-22	NA	57727624	57719750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57727390
transcript_106006.known	chr19	+	4560	3	FSM	ENSG00000204519.11	ENST00000282296.10	4560	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	12	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCTTTATATGGATA	-18	True	NA	20	True	AATAAA	-20	NA	57681976	57690648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57682245_57685261_57685386_57686480
transcript_106009.known	chr19	+	593	2	FSM	ENSG00000204519.11	ENST00000599402.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCCCCACGGACCTAC	12	True	NA	NA	False	NA	NA	NA	57682006	57686835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57682245_57686480
transcript_106011.known	chr19	+	5262	3	FSM	ENSG00000152443.13	ENST00000317178.10	5262	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATGCAATTCTTCATA	-2	True	NA	23	True	AATAAA	-18	NA	57746814	57758148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57747092_57750784_57750912_57753290
transcript_106012.known	chr19	+	549	3	FSM	ENSG00000152443.13	ENST00000431353.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAACACAACACAATCAGA	-6	True	NA	NA	False	NA	NA	NA	57746840	57753444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57747092_57750784_57750912_57753273
transcript_106019.known	chr19	+	769	4	FSM	ENSG00000268750.7	ENST00000596498.2	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	22.4251842554055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTTCTGCCCAGTTCA	-4	True	NA	NA	False	NA	NA	NA	57819725	57858941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57819946_57820493_57820550_57856106_57856234_57858575
transcript_106025.known	chr19	-	461	4	FSM	ENSG00000204514.11	ENST00000600634.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	72.1295131459146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCAGTGTGTGTGGTC	206	False	NA	-7	True	AATAAA	-30	NA	57888817	57864758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57864920_57868457_57868580_57876915_57877043_57888766
transcript_106026.known	chr19	+	2196	3	FSM	ENSG00000083828.16	ENST00000396154.7	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTCTCATACTTTAC	-1	True	NA	47	True	NA	NA	NA	57769675	57780616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57769879_57776542_57776670_57778750
transcript_106027.known	chr19	+	606	3	FSM	ENSG00000268750.7	ENST00000598031.1	606	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	24.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCATTTGTCTTCCGC	47	False	NA	NA	False	AAGAAA	-20	NA	57819805	57858911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57819946_57856103_57856234_57858575
transcript_106030.known	chr19	-	1703	3	FSM	ENSG00000178935.5	ENST00000596248.1	1703	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTCCTTACAAGTAAAAT	-2	True	NA	NA	False	NA	NA	NA	57814913	57807908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57809104_57813293_57813421_57814532
transcript_106031.known	chr19	-	2352	3	FSM	ENSG00000178935.5	ENST00000391701.1	2352	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-2	True	NA	-6	True	AATAAA	-17	NA	57814913	57807081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57809104_57813293_57813421_57814710
transcript_106034.known	chr19	-	528	3	FSM	ENSG00000204514.11	ENST00000596604.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	24	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	103	False	NA	-2	True	AATAAA	-22	NA	57888920	57850314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57850562_57876915_57877043_57888766
transcript_106036.known	chr19	-	6244	3	FSM	ENSG00000204514.11	ENST00000435989.7	6244	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	66.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCTCGTA	-14	True	NA	-4	True	AATAAA	-17	NA	57889037	57869380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57875227_57876915_57877043_57888766
transcript_106038.nnic	chr19	-	552	2	NIC	ENSG00000204514.11	novel	528	3	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	NA	False	NA	-2	True	AATAAA	-22	NA	57889071	57850314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_57850562_57888766
transcript_106039.known	chr19	-	909	2	FSM	ENSG00000204514.11	ENST00000595295.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGGGGCTTCTT	202	False	NA	NA	False	NA	NA	NA	57888821	57858129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57858984_57888766
transcript_10604.known	chr1	+	1448	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	0	0	0	0	multi-exon	TRUE	canonical	3	213	junction_1	136.902280386413	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	-3	True	NA	27	True	AATAAA	-24	NA	75786255	75795086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_106042.known	chr19	-	1975	3	FSM	ENSG00000173480.11	ENST00000595559.1	1975	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCTTATGAGTGCTG	8	True	NA	NA	False	ATTAAA	-22	NA	57916591	57908479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57910115_57912059_57912187_57916378
transcript_106043.known	chr19	-	757	5	FSM	ENSG00000204514.11	ENST00000597348.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.8235969708065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTGTGTGTGGTCA	-14	True	NA	-6	True	AATAAA	-31	NA	57889037	57864757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57864924_57868457_57868580_57875155_57875227_57876915_57877043_57888766
transcript_106044.known	chr19	+	5794	3	FSM	ENSG00000269343.9	ENST00000594901.2	5794	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-9	True	NA	17	True	AATAAA	-17	NA	57830298	57846238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57830565_57839022_57839150_57840837
transcript_106048.known	chr19	-	3726	6	FSM	ENSG00000196724.13	ENST00000396147.6	3726	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	12.8747815515449	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTTTCTTTTTTGA	-20	True	NA	0	True	AATAAA	-18	NA	57935402	57921881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57922630_57923191_57923290_57925622_57928048_57930427_57930555_57933816_57933903_57935160
transcript_106049.known	chr19	-	2207	3	FSM	ENSG00000152454.4	ENST00000282308.4	2207	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTATATTTAGTAT	-9	True	NA	-18	True	AATAAA	-21	NA	57947706	57940832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57942648_57943933_57944061_57947441
transcript_106050.known	chr19	-	1958	2	FSM	ENSG00000152454.4	ENST00000598928.1	1958	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAGGTAACACACATAG	22	False	NA	-109	True	AAAACA	-23	NA	57947675	57940923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57942648_57947441
transcript_106051.known	chr19	-	4087	7	FSM	ENSG00000166704.13	ENST00000551380.7	4080	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	79	junction_1	12.328828005938	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	-28	True	NA	-21	True	AATAAA	-25	NA	58002827	57977075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002395
transcript_106052.known	chr19	-	4225	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	30.3150127824482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	NA	False	NA	-21	True	AATAAA	-25	NA	58003349	57977075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
transcript_106057.known	chr19	+	1919	4	FSM	ENSG00000176593.8	ENST00000313957.8	1919	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACGGGGGTGTCTTTT	-15	True	NA	NA	False	ATTAAA	-10	NA	58002871	58007206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58003047_58003210_58003337_58004382_58004701_58005906
transcript_106059.known	chr19	-	1196	4	FSM	ENSG00000166704.13	ENST00000547121.5	1196	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	7.71722460186015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGAGCTCAGCTTT	-20	True	NA	NA	False	NA	NA	NA	58002819	57999263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57999897_58000682_58000740_58001288_58001371_58002395
transcript_106061.known	chr19	+	852	3	FSM	ENSG00000176593.8	ENST00000547364.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCAGTACCTTGCCCG	34	False	NA	NA	False	NA	NA	NA	58002920	58009930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58003047_58003210_58003337_58009330
transcript_106062.known	chr19	-	651	3	FSM	ENSG00000166704.13	ENST00000552184.1	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGATCTGTCTCTGTGCA	4	True	NA	NA	False	AATAGA	-33	NA	58002795	58000570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58000740_58001288_58001371_58002395
transcript_106063.known	chr19	-	636	3	FSM	ENSG00000166704.13	ENST00000546715.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	48	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGAGCAGTAAGGTGAT	-18	True	NA	NA	False	AAAAAG	-5	NA	58002817	58000223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58000740_58001288_58001371_58002779
transcript_106066.known	chr19	+	1096	2	FSM	ENSG00000176593.8	ENST00000546956.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGGGAGAGGAAAAGTT	15	True	NA	NA	False	NA	NA	NA	58002901	58004161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58003047_58003210
transcript_106068.known	chr19	+	813	3	FSM	ENSG00000152467.10	ENST00000601162.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCCATCTGTCCTGTGG	-3	True	NA	8	True	ATTAAA	-18	NA	58034105	58038442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58034162_58035969_58036012_58037727
transcript_106071.known	chr19	-	2779	7	FSM	ENSG00000121413.13	ENST00000240727.10	2779	7	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_6	59.3794296593245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCTTTTCATTGATTG	25	True	NA	-12	True	ACTAAA	-18	NA	58098210	58083838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58097929
transcript_106072.nic	chr19	-	2633	7	NIC	ENSG00000121413.13	novel	2539	7	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	45.496336848879	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGGGCTACATAAGGT	NA	False	NA	-29	True	AATAAA	-31	NA	58098266	58083855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098114
transcript_106073.known	chr19	-	2539	7	FSM	ENSG00000121413.13	ENST00000601144.6	2539	7	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	35.357303190273	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGGGCTACATAAGGT	4	True	NA	-29	True	AATAAA	-31	NA	58098231	58083855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098173
transcript_106076.known	chr19	+	2253	5	FSM	ENSG00000176293.20	ENST00000511556.5	2253	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	16.238457439055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACCACCAAGCTCTAGGT	6	True	NA	NA	False	NA	NA	NA	58059268	58068630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58059311_58059973_58060036_58061579_58061707_58063445_58063542_58066704
transcript_106079.known	chr19	+	3334	5	FSM	ENSG00000176293.20	ENST00000313434.10	3334	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	13.6450540489952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGCTGTTTTTGGT	19	True	NA	NA	False	NA	NA	NA	58059281	58069755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445_58063542_58066740
transcript_106084.known	chr19	+	3346	4	FSM	ENSG00000176293.20	ENST00000401053.8	3346	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	16.9967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGCTGTTTTTGGT	-24	True	NA	NA	False	NA	NA	NA	58059238	58069755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58059311_58061579_58061707_58063445_58063542_58066704
transcript_10609.known	chr1	+	1653	5	FSM	ENSG00000117054.15	ENST00000525881.6	1653	5	0	0	0	0	multi-exon	TRUE	canonical	3	532	junction_1	38.0164438105407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTTGAGGTTAGGAG	0	True	NA	NA	False	NA	NA	NA	75724430	75735094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75733629_75734790
transcript_106090.known	chr19	-	2004	3	FSM	ENSG00000121413.13	ENST00000600318.1	2004	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	89	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCATGAATCCAGTGG	25	True	NA	NA	False	TTTAAA	-26	NA	58098210	58087636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58088838_58089864_58090387_58097929
transcript_106091.known	chr19	-	761	3	FSM	ENSG00000121413.13	ENST00000600845.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	68	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCAGCTAGCCTG	32	False	NA	NA	False	NA	NA	NA	58098203	58088687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58088838_58089864_58090387_58098114
transcript_106092.nic	chr19	-	1823	3	ISM	ENSG00000121413.13	ENST00000594191.5	1042	4	-42	544	-42	0	5prime_fragment	FALSE	canonical	3	90	junction_2	51	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCATGAATCCAGTGG	NA	False	NA	NA	False	TTTAAA	-26	NA	58098273	58087636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_58088838_58089864_58090387_58098173
transcript_106095.nic	chr19	-	1653	3	ISM	ENSG00000121413.13	ENST00000594191.5	1042	4	-42	714	-42	-170	5prime_fragment	FALSE	canonical	3	90	junction_2	51	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTCCGCACTTTT	NA	False	NA	NA	False	AATACA	-5	NA	58098273	58087806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_58088838_58089864_58090387_58098173
transcript_106096.known	chr19	-	2071	6	FSM	ENSG00000121413.13	ENST00000433686.6	2071	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	55.3664158131985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTTTTCATTGATTGC	8274	False	NA	-11	True	ACTAAA	-19	NA	58089961	58083837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58085377_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864
transcript_106100.known	chr19	+	2808	8	FSM	ENSG00000171606.18	ENST00000617501.5	2808	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	20.1170046863598	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	-26	True	NA	30	True	AATAAA	-22	NA	58183060	58213562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_106104.known	chr19	+	2559	8	FSM	ENSG00000171606.18	ENST00000610905.4	2559	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	38.5888849387531	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGAACCTGTGT	49	False	NA	20	True	AATAAA	-12	NA	58183453	58213552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58183597_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_106108.known	chr19	+	2678	7	FSM	ENSG00000171606.18	ENST00000345813.7	2678	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	40.708994365155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGAACCTGTGTAT	0	True	NA	22	True	AATAAA	-14	NA	58183086	58213554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58183443_58183920_58183999_58185711_58185839_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_106114.known	chr19	+	2539	5	FSM	ENSG00000171606.18	ENST00000424679.6	2539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.324424466309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	NA	False	NA	30	True	AATAAA	-22	NA	58183028	58213562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58183443_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_10612.known	chr1	+	5547	5	FSM	ENSG00000117069.15	ENST00000477717.6	5547	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	9.41740410091868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACCCACTGGATTAGT	-5	True	NA	NA	False	AATAAA	-28	NA	76867479	77067546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_76867691_76868496_76868743_77044203_77044614_77050257_77050366_77062974
transcript_106126.nic	chr19	+	3333	7	FSM	ENSG00000198131.15	ENST00000687789.1	3302	7	-31	0	-31	0	multi-exon	TRUE	canonical	3	81	junction_6	49.7929044476553	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	199	False	NA	NA	False	AATAAA	-18	NA	58228882	58263644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58260850
transcript_106129.nnic	chr19	+	773	7	NNC	ENSG00000198131.15	novel	555	7	NA	NA	-31	-2648	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	67.9656776125519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTTGTGGTATGTTGT	199	False	NA	12	True	AATAAA	-19	NA	58228882	58274599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58274365
transcript_10613.known	chr1	+	573	3	FSM	ENSG00000117069.15	ENST00000480428.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTTACAGATATTATT	-5	True	NA	NA	False	NA	NA	NA	76867479	76871383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_76867691_76868496_76868743_76871267
transcript_106130.nic	chr19	+	852	7	NIC	ENSG00000198131.15	novel	895	7	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	68.6140575165825	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTGGTTTGAATGCAA	199	False	NA	48	True	AAAAAG	-8	NA	58228882	58277495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58277182
transcript_106132.known	chr19	+	588	7	FSM	ENSG00000198131.15	ENST00000594384.5	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	65.9646369908403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTAGGAAAAGTGCAAG	-2	True	NA	NA	False	NA	NA	NA	58228913	58260965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_10614.nic	chr1	+	1829	3	ISM	ENSG00000117069.15	ENST00000318803.6	2055	5	-75	18558	-75	-4816	5prime_fragment	FALSE	canonical	3	25	junction_2	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACTGTGTCTGTGTGT	80	False	NA	NA	False	AATAAA	-33	NA	76867404	77045500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_76867691_76868496_76868743_77044203
transcript_106141.known	chr19	+	3516	7	FSM	ENSG00000198131.15	ENST00000596825.5	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	77.9602819104418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	59	False	NA	NA	False	AATAAA	-18	NA	58228974	58263644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_106146.nnic	chr19	+	3113	5	NNC	ENSG00000278129.2	novel	9110	4	NA	NA	-7	819	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_4	20.7545175805173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTTTCAAATTAAAGTAA	NA	False	NA	13	True	AATAAA	-18	NA	58278947	58303610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097_58296490_58303312
transcript_106149.known	chr19	+	9110	4	FSM	ENSG00000278129.2	ENST00000621650.2	9110	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	3.77123616632825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGCAGACTGT	-16	True	NA	6	True	AATAAA	-14	NA	58278954	58302791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097
transcript_10615.known	chr1	+	787	2	FSM	ENSG00000117069.15	ENST00000496845.1	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTCGCTGCCTGGTGGG	-3	True	NA	NA	False	NA	NA	NA	76867481	76869074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_76867691_76868496
transcript_106152.nnic	chr19	+	921	4	NNC	ENSG00000142396.10	novel	1469	4	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	159.808218395259	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTCTGTCTCATTT	NA	False	NA	23	True	NA	NA	NA	58305348	58315204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58305446_58306087_58306217_58312165_58312404_58314747
transcript_106153.known	chr19	+	1469	4	FSM	ENSG00000142396.10	ENST00000413518.5	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	30.1809358517739	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGATGTATATTTT	NA	False	NA	23	True	TATAAA	-32	NA	58305318	58315663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58305446_58306087_58306217_58312165_58312463_58314747
transcript_106156.known	chr19	+	922	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	136.252217107343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	-10	True	NA	21	True	NA	NA	NA	58305373	58315202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
transcript_106159.known	chr19	+	4654	3	FSM	ENSG00000182318.6	ENST00000329665.5	4654	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTAAAGACAAATTC	-3	True	NA	6	True	AATAAA	-20	NA	58326993	58342332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58327115_58334751_58335206_58338253
transcript_106163.nic	chr19	-	456	3	ISM	ENSG00000283103.4	ENST00000669883.1	2321	4	-7	4389	0	0	5prime_fragment	FALSE	canonical	3	292	junction_1	12.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	-33	True	NA	-25	True	AATAAA	-20	NA	58326942	58314787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_58315037_58325274_58325362_58326822
transcript_106164.known	chr19	+	616	2	FSM	ENSG00000142396.10	ENST00000434052.5	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAGGAGAGGGAGGAT	-7	True	NA	NA	False	NA	NA	NA	58305376	58306634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58305446_58306087
transcript_106165.known	chr19	-	2708	2	FSM	ENSG00000268516.3	ENST00000597230.3	2726	2	18	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTGTGTGTTTCGT	-10	True	NA	-5	True	AATACA	-23	NA	58278808	58257269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58259692_58278522
transcript_106167.known	chr19	-	683	2	FSM	ENSG00000283103.4	ENST00000669440.2	687	2	4	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTTGGTGGTTCACC	-6	True	NA	-17	True	AATAAA	-28	NA	58327248	58314779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58315037_58326822
transcript_106168.known	chr19	+	895	7	FSM	ENSG00000198131.15	ENST00000595981.5	895	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_6	91.0544708768694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTGGTTTGAATGCAA	381	False	NA	48	True	AAAAAG	-8	NA	58229467	58277495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58276322_58276430_58277182
transcript_10617.known	chr1	+	2055	5	FSM	ENSG00000117069.15	ENST00000318803.6	2055	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.985287751463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAAAGGTAGTTTTCT	-5	True	NA	NA	False	ATTAAA	-22	NA	76867479	77064058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_76867691_76868496_76868743_77044203_77044614_77050261_77050366_77062974
transcript_106174.known	chr19	+	977	3	FSM	ENSG00000268895.6	ENST00000593960.5	977	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTTGAGGCGACTGC	-7	True	NA	NA	False	NA	NA	NA	58347752	58354502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58347845_58353378_58353475_58353713
transcript_106177.known	chr19	+	1762	3	FSM	ENSG00000269054.3	ENST00000663335.1	1762	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGGGGAAGCCTGTG	6	True	NA	NA	False	AATAAA	-4	NA	58362607	58367593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58362753_58364535_58364593_58366033
transcript_106178.known	chr19	-	3465	3	FSM	ENSG00000174586.11	ENST00000311044.8	3465	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGGGAGGATGCAGTG	1	True	NA	NA	False	AATAAA	-16	NA	58362751	58354356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58357650_58358488_58358586_58362676
transcript_106180.known	chr19	+	1056	2	FSM	ENSG00000268895.6	ENST00000600686.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGGGGGAGAATGCAT	29	False	NA	NA	False	NA	NA	NA	58347788	58354713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58347845_58353713
transcript_106181.known	chr19	-	475	2	FSM	ENSG00000121410.12	ENST00000598345.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTCTTTGGACTCC	-35	True	NA	-21	True	AATAAA	-19	NA	58347657	58346859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58347030_58347352
transcript_106182.known	chr19	-	2261	2	FSM	ENSG00000174586.11	ENST00000425453.3	2261	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCACCTGTGTAGGTCT	NA	False	NA	NA	False	NA	NA	NA	58362848	58355560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58357650_58362676
transcript_106184.known	chr19	-	2038	3	FSM	ENSG00000152475.7	ENST00000427624.2	2038	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCACAGGCTTCCCCTAA	8	False	NA	-18	True	ATTAAA	-20	NA	58381022	58367617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58369362_58369716_58369929_58380940
transcript_106185.known	chr19	-	1939	3	FSM	ENSG00000152475.7	ENST00000597582.2	1939	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCGTCCACAGGCTTCC	0	True	NA	-23	True	ATTAAA	-15	NA	58381030	58367622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58369362_58369818_58369929_58380940
transcript_106186.known	chr19	+	741	6	FSM	ENSG00000083845.9	ENST00000196551.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	7525	junction_5	545.395782895321	4174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	-3	True	NA	31	True	AATAAA	-31	NA	58387268	58394804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_106187.known	chr19	+	536	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3560.2247471192	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	-8	True	NA	31	True	AATAAA	-31	NA	58387263	58394804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
transcript_106188.known	chr19	+	800	7	FSM	ENSG00000083845.9	ENST00000598495.5	800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3831.17359811441	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGTGCTGTTGTCTG	-3	True	NA	27	True	AATAAA	-27	NA	58387268	58394800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58387340_58388136_58388246_58388417_58388481_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_106190.known	chr19	+	2308	4	FSM	ENSG00000171574.18	ENST00000306910.9	2308	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.8977121983832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	-13	True	NA	15	True	AATAAA	-27	NA	58408648	58418327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58409166_58409940_58410092_58415523_58415647_58416810
transcript_106191.known	chr19	+	2187	4	FSM	ENSG00000171574.18	ENST00000593920.5	2187	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.5181016954473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGCCGCTTAAAATTT	26	True	NA	-2	True	AATAAA	-10	NA	58408687	58418310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58409166_58410005_58410092_58415523_58415647_58416810
transcript_106192.nic	chr19	+	2273	4	NIC	ENSG00000171574.18	novel	2308	4	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	11.8977121983832	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	-2	True	NA	15	True	AATAAA	-27	NA	58408659	58418327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58409166_58409964_58410092_58415523_58415647_58416810
transcript_106193.known	chr19	+	591	3	FSM	ENSG00000171574.18	ENST00000596921.5	591	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACCCCCGAAAAATT	5340	False	NA	NA	False	NA	NA	NA	58401503	58417119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58401663_58415523_58415647_58416810
transcript_106194.nic	chr19	+	2183	3	NIC	ENSG00000171574.18	novel	2308	4	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	6.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	7068	False	NA	15	True	AATAAA	-27	NA	58408622	58418327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58409166_58415523_58415647_58416810
transcript_106195.known	chr19	-	2962	3	FSM	ENSG00000131849.13	ENST00000254166.4	2962	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTAATCTTAGGGGTTCT	-3	True	NA	1	True	AATAAA	-20	NA	58440153	58432813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58435212_58437046_58437216_58439758
transcript_106196.known	chr19	+	2368	5	FSM	ENSG00000249471.8	ENST00000545523.5	2368	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.30919014539883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGCTTTGGGTCAAC	-10	True	NA	NA	False	NA	NA	NA	58451610	58457132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58451705_58453186_58453267_58453695_58453823_58454227_58454345_58455182
transcript_106197.known	chr19	+	2978	4	FSM	ENSG00000249471.8	ENST00000336614.9	2978	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.32049379893857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGTGTGGACCTCCACA	1	True	NA	30	True	AATAGA	-15	NA	58451621	58457833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58451705_58453695_58453823_58454227_58454345_58455182
transcript_106198.known	chr19	+	578	4	FSM	ENSG00000249471.8	ENST00000599193.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCTCGCGCAGTGACC	4	True	NA	NA	False	NA	NA	NA	58451624	58455387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58451754_58453695_58453823_58454227_58454345_58455182
transcript_106199.nic	chr19	+	4062	4	NIC	ENSG00000249471.8	novel	2978	4	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_1	4.32049379893857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGTGTGGACCTCCACA	-5	True	NA	30	True	AATAGA	-15	NA	58451615	58457833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58452783_58453695_58453823_58454227_58454345_58455182
transcript_10620.known	chr1	-	4601	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_7	35.0279888089511	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGTGGCAGTGTC	-12	True	NA	-9	True	ATTAAA	-18	NA	77219430	77088988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
transcript_106201.nic	chr19	+	2220	7	NIC	ENSG00000083838.17	novel	3922	7	NA	NA	-272	0	intron_retention	FALSE	canonical	3	24	junction_1	3.48409082672781	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	8771	False	NA	7	True	CATAAA	-17	NA	58475873	58481230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58476197_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_106203.known	chr19	+	2050	7	FSM	ENSG00000083838.17	ENST00000594369.6	2050	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	9.74679434480896	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	-2	True	NA	7	True	CATAAA	-17	NA	58476351	58481230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_106209.known	chr19	+	5054	4	FSM	ENSG00000083812.13	ENST00000196482.4	5054	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	0.816496580927726	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAGGGAAACCTCCAC	9	True	NA	NA	False	AATAAA	-21	NA	58467079	58475436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58467184_58469179_58469307_58469727_58469845_58470730
transcript_106210.nnic	chr19	+	4027	4	NNC	ENSG00000083812.13	novel	5653	4	NA	NA	24	15	intron_retention	FALSE	canonical	0	0	junction_1	6.64997911442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACCATCTGCAACTCAG	1	True	NA	NA	False	NA	NA	NA	58467103	58473429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58468188_58469179_58469307_58469727_58469845_58470730
transcript_106219.known	chr19	-	643	3	FSM	ENSG00000083807.10	ENST00000594786.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	1.5	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGTCTGCGTGGAT	-38	True	NA	-5	True	AATAAA	-20	NA	58499275	58498332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58498692_58498784_58498916_58499122
transcript_106239.known	chr19	-	2352	3	FSM	ENSG00000119574.13	ENST00000354590.7	2352	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	53	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	241	False	NA	-6	True	AATAAA	-32	NA	58519554	58513529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58514311_58516394_58517674_58519262
transcript_106240.nnic	chr19	-	2343	3	NNC	ENSG00000119574.13	novel	2352	3	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	171	False	NA	-6	True	AATAAA	-32	NA	58519624	58513529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_58514311_58516394_58517674_58519341
transcript_106242.known	chr19	-	2159	3	FSM	ENSG00000119574.13	ENST00000600990.1	2159	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	49	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGACTGTAGGCCATG	44	False	NA	-42	True	GGGGCT	-23	NA	58519751	58513565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58514311_58516394_58517674_58519616
transcript_106246.known	chr19	-	2129	3	FSM	ENSG00000119574.13	ENST00000594051.6	2129	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	17	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	-15	True	NA	-6	True	AATAAA	-32	NA	58519810	58513529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58514311_58516394_58517674_58519741
transcript_106255.known	chr19	+	2709	15	FSM	ENSG00000130726.12	ENST00000341753.10	2709	15	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	757.6869103275	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	15	False	NA	34	True	AATAAA	-14	NA	58544472	58550715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58545098_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_106258.nic	chr19	-	1104	6	FSM	ENSG00000130724.10	ENST00000597848.2	1208	6	-10	114	-3	0	multi-exon	FALSE	canonical	3	31	junction_5	382.645214265121	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-9	True	NA	-16	True	AATAAA	-16	NA	58555000	58551565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554672
transcript_106259.nic	chr19	-	1013	6	FSM	ENSG00000130724.10	ENST00000596708.2	1074	6	-53	114	-2	0	multi-exon	FALSE	canonical	3	22	junction_5	386.233608066414	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-22	True	NA	-16	True	AATAAA	-16	NA	58555013	58551565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554776
transcript_106263.known	chr19	-	885	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	239.39540513552	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	18	True	NA	-16	True	AATAAA	-16	NA	58554973	58551565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
transcript_106264.known	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	256.858716028871	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	2	True	NA	-16	True	AATAAA	-16	NA	58555105	58551565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
transcript_106268.nnic	chr19	-	1413	7	NNC	ENSG00000130725.8	novel	734	7	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_6	775.653577457245	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTTCTTACTTC	-55	True	NA	-6	True	ATTAAA	-17	NA	58558987	58555711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558476
transcript_10627.known	chr1	+	555	1	FSM	ENSG00000226084.5	ENST00000471722.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	41	False	NA	NA	False	AAGAAA	-34	NA	77129113	77129668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77129100_77129700
transcript_106270.known	chr19	-	734	7	FSM	ENSG00000130725.8	ENST00000595957.5	734	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	799.589825403556	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGGGGTGGCTACATCG	-22	True	NA	NA	False	NA	NA	NA	58558954	58556140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558693
transcript_106279.known	chr19	-	2666	6	FSM	ENSG00000099326.9	ENST00000215057.7	2666	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.28012738724303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTCCACCCACTCAG	-18	True	NA	-29	True	AATAAA	-14	NA	58573335	58561931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58563505_58569276_58569398_58569515_58569587_58570343_58570528_58570993_58571430_58573054
transcript_10628.known	chr1	+	3280	14	FSM	ENSG00000154027.19	ENST00000354567.7	3280	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	10.6254133229735	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTTTTTCTATTTATT	-8	True	NA	NA	False	AATAAA	-18	NA	77282018	77559966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77282374_77286940_77287128_77293792_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638_77417716_77483316_77483360_77486307_77486353_77518563_77518728_77521826_77521944_77535846_77536039_77558601
transcript_106280.known	chr19	-	2587	6	FSM	ENSG00000099326.9	ENST00000599369.5	2587	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	10.7591821250502	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTCTCCACCCACTCA	-8	True	NA	-30	True	AATAAA	-13	NA	58573575	58561932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58563505_58569276_58569398_58569515_58569587_58570343_58570528_58570993_58571430_58573372
transcript_106287.known	chr19	+	1308	4	FSM	ENSG00000286104.1	ENST00000487264.5	1308	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAATAGAGCACTTTTA	-10	True	NA	NA	False	TATAAA	-23	NA	58575444	58599801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58575589_58586154_58586357_58591497_58591625_58598966
transcript_106289.known	chr19	+	3282	2	FSM	ENSG00000213753.11	ENST00000493504.1	3282	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTACTCTTTGTTGTGTT	5	True	NA	12	True	AATAAA	-23	NA	58575459	58584397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58575589_58581244
transcript_106296.known	chr2	-	3880	2	FSM	ENSG00000184731.6	ENST00000327669.5	3880	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-6	True	NA	-5	True	AATAAA	-21	NA	46505	38813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_41628_45439
transcript_106304.known	chr2	-	1744	10	FSM	ENSG00000035115.22	ENST00000356150.10	1744	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	95.3251744760475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	1	True	NA	-6	True	AATAAA	-25	NA	264032	218143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_106305.known	chr2	-	1999	10	FSM	ENSG00000035115.22	ENST00000463865.5	1999	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	89.9202664641718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	408	False	NA	-11	True	AATAAA	-20	NA	264392	218148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
transcript_106308.known	chr2	-	1695	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	66.1829849734809	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	1	True	NA	2	True	AATAAA	-33	NA	264032	218135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_106309.nic	chr2	-	2112	9	NIC	ENSG00000035115.22	novel	1999	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_8	51.1175116765282	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAATATTTCAATTTTG	8	True	NA	-13	True	AATAAA	-18	NA	264564	218150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
transcript_106319.known	chr2	+	577	7	FSM	ENSG00000143727.16	ENST00000453390.5	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	1110.65171058358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCACGTTCCAGGGCC	26	False	NA	NA	False	NA	NA	NA	264964	277375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272036_272066_272191_272306_275139_275202_276979_277086_277226
transcript_106321.known	chr2	+	546	7	FSM	ENSG00000143727.16	ENST00000442386.5	546	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1263.83654226152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCAGGTGCTGCAGAG	1	True	NA	NA	False	NA	NA	NA	264899	277261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_106324.known	chr2	+	1474	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	0	0	0	0	multi-exon	FALSE	canonical	3	2212	junction_3	307.436887832283	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	8	True	NA	99	True	AATAAA	-36	NA	264946	278283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_106327.known	chr2	+	1552	6	FSM	ENSG00000143727.16	ENST00000272067.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1075.86047422517	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	NA	False	NA	99	True	AATAAA	-36	NA	264868	278283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272191_272306_275139_275202_276979_277086_277226
transcript_106331.known	chr2	-	541	6	FSM	ENSG00000035115.22	ENST00000488979.6	541	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	73.1119689243834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAACTAATAGAAAGT	4	True	NA	NA	False	NA	NA	NA	264568	233118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233230_234159_234273_247537_247603_249730_249845_253004_253116_264541
transcript_106332.known	chr2	+	689	5	FSM	ENSG00000143727.16	ENST00000413140.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1252.80994169108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATGGGGTATTTTAA	-6	True	NA	14	True	AATAAA	-16	NA	264892	277506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272036_272151_276979_277086_277226
transcript_106336.known	chr2	+	1149	4	FSM	ENSG00000143727.16	ENST00000405233.5	1149	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	1228.05971624619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGAAGAGGGAAACAGAGG	-13	True	NA	NA	False	NA	NA	NA	264925	273155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272036_272066_272191
transcript_106338.known	chr2	+	605	3	FSM	ENSG00000143727.16	ENST00000439645.6	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTGCAAGTTTGTTGCT	-23	True	NA	NA	False	ATTAAA	-28	NA	264915	272630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272191
transcript_10634.known	chr1	-	6412	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	71.3748726722478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	1	True	NA	-5	True	TATAAA	-19	NA	77682658	77562415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
transcript_106343.known	chr2	-	2572	6	FSM	ENSG00000151353.15	ENST00000432667.5	2572	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	123.765908068418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCTCAGGTAGTATC	0	True	NA	NA	False	ATTAAA	-20	NA	677406	667972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_677288
transcript_106348.known	chr2	-	654	5	FSM	ENSG00000151353.15	ENST00000405941.3	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	112.629924975559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCAGCCAGCACTG	748	False	NA	NA	False	TTTAAA	-31	NA	676704	669422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_676573
transcript_106349.known	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	12.9687123493429	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	0	True	NA	0	True	AATAAA	-32	NA	677406	663876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
transcript_10635.nic	chr1	-	4430	15	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_8	36.7640713030468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAATGCTTGTTGTGACT	101	False	77683477	-31	True	AATAAA	-27	NA	77683443	77564505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
transcript_106360.known	chr2	+	1943	3	FSM	ENSG00000233296.2	ENST00000445418.1	1943	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCCTCCCCATCCCTG	NA	False	NA	NA	False	NA	NA	NA	677185	682802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_677474_680043_680152_681255
transcript_106367.known	chr2	+	1907	17	FSM	ENSG00000172554.12	ENST00000308624.10	1907	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	28.6825295258281	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGTCCTCCTTGTTAAA	3	True	NA	6	True	AATAAA	-21	NA	950848	1367613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
transcript_106382.known	chr2	+	1436	11	FSM	ENSG00000172554.12	ENST00000407292.1	1436	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.7418673507074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGTCCTCCTTGTTAAA	63	False	NA	6	True	AATAAA	-21	NA	950938	1367613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_951069_1083517_1083656_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
transcript_106395.nic	chr2	+	822	2	ISM	ENSG00000172554.12	ENST00000452177.5	1818	8	-69	77602	-50	-77602	5prime_fragment	FALSE	canonical	3	104	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCCCAAAAGCCACCATG	NA	False	NA	NA	False	AATAGA	-45	NA	950798	1084069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_951069_1083517
transcript_106396.known	chr2	-	1641	2	FSM	ENSG00000203635.2	ENST00000366424.2	1641	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGAGCTACAATTCAAGA	-5	True	NA	NA	False	NA	NA	NA	1625419	1620509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_1621980_1625248
transcript_106403.known	chr2	-	6817	23	FSM	ENSG00000130508.11	ENST00000252804.9	6817	23	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_19	62.2271399161874	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	-2	True	NA	-1	True	AATAAA	-22	NA	1744515	1631886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
transcript_106406.nic	chr2	-	5551	22	NIC	ENSG00000130508.11	novel	6817	23	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_19	79.2167725431565	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	1744619	1633184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1691927_1692000_1693062_1693135_1744255
transcript_10641.known	chr1	-	587	5	FSM	ENSG00000036549.13	ENST00000463166.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	25.3019268040993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAACGGCTTGGATGAA	3	True	NA	NA	False	NA	NA	NA	77683403	77633311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
transcript_106424.known	chr2	-	1795	10	FSM	ENSG00000032389.13	ENST00000398659.8	1795	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	90.9224333643182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTCTTTGTCCAT	4	True	NA	-2	True	NA	NA	NA	3377830	3188924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3274338_3274420_3338016_3338150_3354549_3354634_3377647
transcript_106426.known	chr2	-	1657	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	18.8331489666492	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	16	True	NA	-5	True	AATAAA	-17	NA	3377818	3188969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_106428.nic	chr2	-	1534	8	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	71.8408104131372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-18	True	NA	-5	True	AATAAA	-17	NA	3377852	3188969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3338016_3338150_3354549_3354634_3377647
transcript_106429.known	chr2	-	847	7	FSM	ENSG00000032389.13	ENST00000455162.5	847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	83.0334604575502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGCGTCTATGCCGT	46	False	NA	NA	False	NA	NA	NA	3377788	3189459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3354549_3354634_3377647
transcript_10643.known	chr1	-	561	4	FSM	ENSG00000036549.13	ENST00000414381.5	561	4	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	91.4925619320439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATCTCTTCTAATTCT	32	True	NA	NA	False	NA	NA	NA	77683374	77633245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77633406_77639448_77639603_77641521_77641656_77683261
transcript_10644.known	chr1	-	686	3	FSM	ENSG00000036549.13	ENST00000469944.1	686	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCTTTTTAAAGCATTT	16	True	NA	NA	False	ATTAAA	-25	NA	77682643	77640953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77641447_77641521_77641656_77682584
transcript_106449.known	chr2	+	2499	12	FSM	ENSG00000171853.16	ENST00000324266.10	2499	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_7	21.7814084040981	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	-7	True	NA	12	True	AATAAA	-13	NA	3379693	3479565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3379877_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_106453.known	chr2	+	2483	12	FSM	ENSG00000171853.16	ENST00000382110.6	2483	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	47.2312755325298	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTGCTGCGTGTCTTC	-26	True	NA	14	True	AATAAA	-15	NA	3379674	3479567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3379840_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_106460.nnic	chr2	+	2423	11	NIC	ENSG00000171853.16	novel	2499	12	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	50.6498766039958	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	NA	False	NA	12	True	AATAAA	-13	NA	3379655	3479565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_3379877_3387619_3388671_3401776_3401894_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_10647.nic	chr1	-	4488	25	NIC	ENSG00000077254.14	novel	4502	25	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	157	junction_11	78.3405027747461	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	12	False	77759870	-4	True	AATAAA	-21	NA	77759858	77695986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_106476.nnic	chr2	+	3850	9	NNC	ENSG00000171853.16	novel	2499	12	NA	NA	-19	1649	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_8	56.7460075688149	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCAATGAAATGTATTCA	NA	False	NA	1	True	AATAAA	-16	NA	3379655	3462591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_3379877_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3460643
transcript_10648.known	chr1	-	4502	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_24	73.196652928942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGAATGTTGAATTT	18	False	77759870	-8	True	AATAAA	-17	NA	77759852	77695990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_10649.nic	chr1	-	4327	24	NIC	ENSG00000077254.14	novel	4327	24	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_11	64.7784649973293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-6	False	NA	-4	True	AATAAA	-21	NA	77759876	77695986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_10650.known	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_11	57.5423243589238	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	18	False	77759870	-4	True	AATAAA	-21	NA	77759852	77695986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_106500.known	chr2	+	1538	2	FSM	ENSG00000171853.16	ENST00000482645.1	1538	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATATGGAAAAATATA	19	True	NA	0	True	AATAAA	-14	NA	3379719	3389000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3379877_3387619
transcript_106501.known	chr2	+	567	2	FSM	ENSG00000171853.16	ENST00000493792.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	NA	False	NA	12	True	AATAAA	-13	NA	3478713	3479565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3478934_3479218
transcript_106502.known	chr2	-	2181	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_3	49.5580467734555	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTGAATTTTGACAA	-10	True	NA	-3	True	AATAAA	-16	NA	3519531	3497365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
transcript_106519.known	chr2	-	2120	8	FSM	ENSG00000171865.10	ENST00000436842.5	2120	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	175.443461443467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAGTA	-2	True	NA	NA	False	NA	NA	NA	3558289	3544792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3557894
transcript_106520.known	chr2	-	5289	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	0	0	0	0	multi-exon	TRUE	canonical	3	456	junction_6	32.8621114255755	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTCGTCTTTGTCTTCT	-2	True	NA	-1	True	AATAAA	-33	NA	3558333	3541429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
transcript_106531.known	chr2	+	4333	3	FSM	ENSG00000234171.4	ENST00000664922.2	4344	3	11	0	6	0	multi-exon	FALSE	canonical	3	63	junction_1	43	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	9	True	NA	NA	False	NA	NA	NA	3558473	3564842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3558999_3559447_3559730_3561316
transcript_106532.known	chr2	+	1115	3	FSM	ENSG00000234171.4	ENST00000438436.4	1275	3	160	0	160	0	multi-exon	FALSE	canonical	3	66	junction_1	41.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	-44	True	NA	NA	False	AATAAA	-39	NA	3558627	3561734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3558999_3559403_3559730_3561316
transcript_106533.known	chr2	+	836	2	FSM	ENSG00000234171.4	ENST00000426725.2	982	2	139	7	110	-3	multi-exon	FALSE	canonical	3	67	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	25	True	NA	NA	False	AATAAA	-36	NA	3558577	3561731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3558999_3561316
transcript_106534.known	chr2	-	3700	2	FSM	ENSG00000287126.1	ENST00000656939.1	3700	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAACATTTAAAGAAAA	6	True	NA	NA	False	AATAAA	-16	NA	3575100	3568504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3571239_3574134
transcript_106537.known	chr2	+	710	7	FSM	ENSG00000171863.15	ENST00000646909.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4266.6979425937	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	-4	True	NA	NA	False	AATAAA	-19	NA	3575315	3580919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575351_3575556_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_106538.known	chr2	+	704	7	FSM	ENSG00000171863.15	ENST00000406376.1	704	7	0	0	0	0	multi-exon	TRUE	canonical	2	363	junction_1	4141.72288694237	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTCACAGTACT	4	True	NA	NA	False	AATAAA	-1	NA	3575357	3580901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575449_3575600_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_106539.known	chr2	+	764	7	FSM	ENSG00000171863.15	ENST00000403564.5	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	4209.19084662757	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	5	True	NA	NA	False	AATAAA	-19	NA	3575324	3580919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575449_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_10654.known	chr1	-	2917	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	77.703722438025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	18	False	77759870	NA	False	AATAAA	-15	NA	77759852	77711651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_106540.known	chr2	+	732	7	FSM	ENSG00000171863.15	ENST00000645674.2	732	7	0	0	0	0	multi-exon	FALSE	canonical	3	7472	junction_1	1928.32852203376	3079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	-12	True	NA	NA	False	AATAAA	-20	NA	3575259	3580920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_106541.known	chr2	+	511	3	FSM	ENSG00000171863.15	ENST00000479123.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	10507	junction_2	460.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAATAAGTTTTAAA	37	False	NA	NA	False	NA	NA	NA	3575632	3576873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575685_3575816_3575889_3576486
transcript_106542.known	chr2	+	557	7	FSM	ENSG00000171863.15	ENST00000647131.1	557	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	4215.16451504433	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	1	True	NA	NA	False	NA	NA	NA	3575320	3580878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576558_3576631_3577709_3577775_3580109_3580261_3580804
transcript_106543.known	chr2	+	907	6	FSM	ENSG00000171863.15	ENST00000462576.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	7626	junction_5	1643.95588748604	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	5	True	NA	NA	False	AATAAA	-19	NA	3575324	3580919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_106544.known	chr2	+	2021	3	FSM	ENSG00000236106.3	ENST00000655406.1	2021	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAGTATCCCCAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5726252	5730355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_5726580_5728086_5728153_5728727
transcript_106545.known	chr2	+	1746	2	FSM	ENSG00000236106.3	ENST00000413960.2	1769	2	11	12	11	-12	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATGTGAGTGGCTGC	NA	False	NA	NA	False	AATAAA	-4	NA	5726448	5730342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_5726580_5728727
transcript_106548.known	chr2	-	3095	5	FSM	ENSG00000134326.12	ENST00000256722.10	3095	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCATCCTGGGTACAT	3	True	NA	-7	True	AATAAA	-24	NA	6865907	6848315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_6849974_6851449_6851684_6861183_6861386_6863463_6863579_6865021
transcript_106549.known	chr2	-	2417	5	FSM	ENSG00000134326.12	ENST00000478738.5	2417	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.08220700148449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTCATCCTGGGTAC	2	True	NA	-9	True	AATAAA	-22	NA	6866635	6848317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_6849974_6851449_6851684_6861183_6861386_6863463_6863579_6866425
transcript_10655.nic	chr1	-	2947	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	-6	15661	-6	0	5prime_fragment	FALSE	canonical	3	165	junction_21	71.2346255839544	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	12	False	77759870	NA	False	AATAAA	-15	NA	77759858	77711651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_106554.known	chr2	+	5720	9	FSM	ENSG00000151692.15	ENST00000320892.11	5720	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	5.03580926962092	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGCGTGGCTCCGTCTTT	-32	True	NA	22	True	AATACA	-16	NA	6917411	7044179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_6917623_6940947_6941148_6996915_6997062_7014453_7014559_7014711_7014773_7020472_7020681_7024368_7024517_7030125_7030216_7039628
transcript_106560.nic	chr2	+	2122	5	ISM	ENSG00000151692.15	ENST00000320892.11	5720	9	-38	28046	-38	1650	5prime_fragment	FALSE	canonical	3	63	junction_1	2.73861278752583	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATGTAGCCCACT	NA	False	NA	NA	False	AAAAAG	-11	NA	6917373	7016133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_6917623_6940947_6941148_6996915_6997062_7014453_7014559_7014711
transcript_106567.nnic	chr2	+	2936	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	58	junction_1	16	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	24	False	NA	-69	True	AATAAA	-15	NA	7876669	7892268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_7878482_7883431_7883560_7891272
transcript_106570.nnic	chr2	+	1610	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	99	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATTATTCTTAAATA	737	False	NA	16	True	AATAAA	-16	NA	7877382	7891783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_7878482_7891272
transcript_106573.known	chr2	+	1299	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTTTTTAAGAT	-1	True	NA	NA	False	AATAAA	-25	NA	8682055	8684461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_8682514_8682842_8682907_8683684
transcript_106576.known	chr2	+	623	2	FSM	ENSG00000115738.10	ENST00000331129.3	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGCATGCTTACTTCG	-1	True	NA	NA	False	TATAAA	-13	NA	8682055	8683007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_8682514_8682842
transcript_106577.nic	chr2	-	7220	29	NIC	ENSG00000134313.17	novel	7348	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	17.3850084960624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTCATGAATTTTTA	-4	True	NA	-5	True	AATAAA	-14	NA	8837613	8728928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_106579.known	chr2	-	7348	30	FSM	ENSG00000134313.17	ENST00000256707.8	7348	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.2364083339083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCACATGTCTGAA	-4	True	NA	66	True	AATAAA	-16	NA	8837613	8728857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747144_8747202_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_106580.known	chr2	-	7248	29	FSM	ENSG00000134313.17	ENST00000473731.5	7248	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	29.20240764466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTCATGAATTTTTA	-21	True	NA	-5	True	AATAAA	-14	NA	8837630	8728928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837468
transcript_106583.known	chr2	-	7622	13	FSM	ENSG00000143797.12	ENST00000305997.8	7622	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	14.5093360748634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTGTGTTTGCTAA	23	True	NA	0	True	ATTAAA	-17	NA	9003684	8852689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_8858905_8860612_8860765_8862589_8862723_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_8943186_8943265_8958496_8958643_9003539
transcript_106594.nic	chr2	-	2109	11	NIC	ENSG00000143797.12	novel	7622	13	NA	NA	-116	229	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	35.1005697959449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTTCTTAAAGTATGTC	NA	False	NA	-18	True	AATAAA	-17	NA	9003825	8858119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_8858905_8860612_8860765_8862589_8862723_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_9003539
transcript_106597.known	chr2	+	3273	1	FSM	ENSG00000261104.1	ENST00000565044.1	3273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCAGTTTTGTACCTG	NA	False	NA	NA	False	AATAAA	-25	NA	9106592	9109865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9106600_9109900
transcript_1066.known	chr1	-	3112	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_6	293.571132777049	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-12	True	NA	-15	True	CATAAA	-17	NA	1399335	1385710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_10660.nic	chr1	-	2762	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_8	58.8082477208767	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-6	False	NA	NA	False	AATAAA	-15	NA	77759876	77711651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_106602.known	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	158.71344991422	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	445	False	NA	NA	False	TATAAA	-23	NA	9423229	9403474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
transcript_106612.nic	chr2	-	1589	7	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	128.406580828243	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	419	False	NA	-22	True	ATTAAA	-22	NA	9423255	9406659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_106614.known	chr2	-	4153	7	FSM	ENSG00000119185.13	ENST00000355346.9	4153	7	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_6	42.1966296705739	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-29	True	NA	NA	False	TATAAA	-23	NA	9423528	9403474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_106616.known	chr2	-	874	7	FSM	ENSG00000119185.13	ENST00000488451.5	874	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	171.495059857582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGTTAACTCTCAAT	19	True	NA	-29	True	ATTAAA	-15	NA	9423480	9406666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_106617.nic	chr2	-	909	6	NIC	ENSG00000119185.13	novel	4153	7	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	136.825436231718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	98	False	NA	-22	True	ATTAAA	-22	NA	9423576	9406659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
transcript_106618.known	chr2	-	861	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	131.266141864534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-1	True	NA	-22	True	ATTAAA	-22	NA	9423500	9406659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
transcript_106619.nic	chr2	-	1438	6	NIC	ENSG00000119185.13	novel	2126	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_5	158.559011096815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACTCTCAATGAAGTC	419	False	NA	-23	True	ATTAAA	-21	NA	9423255	9406660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_10662.nic	chr1	-	2786	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-24	15665	-24	0	5prime_fragment	FALSE	canonical	3	226	junction_8	48.4564495191301	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-6	False	NA	NA	False	AATAAA	-15	NA	77759876	77711651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_106620.known	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	111.687062813918	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-7	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_106621.known	chr2	-	2126	6	FSM	ENSG00000119185.13	ENST00000359712.7	2126	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	139.038699648695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACTCTCAATGAAGTC	424	False	NA	-23	True	ATTAAA	-21	NA	9423250	9406660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_106622.known	chr2	-	1043	6	FSM	ENSG00000119185.13	ENST00000456913.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_5	46.1952378498044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGGTCGGCTTGCT	-5	True	NA	NA	False	NA	NA	NA	9423430	9407029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_106623.known	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	136.861928599593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	37	True	NA	NA	False	NA	NA	NA	9423462	9406348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
transcript_106630.known	chr2	-	560	4	FSM	ENSG00000119185.13	ENST00000497031.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	153.338405713202	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	230	False	NA	-10	True	ATTAAA	-34	NA	9423444	9406647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9423372
transcript_106634.known	chr2	+	2259	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	0	0	0	0	multi-exon	TRUE	canonical	3	784	junction_10	109.390763322805	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	-18	True	NA	24	True	AATAAA	-23	NA	9423653	9473101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
transcript_106643.known	chr2	-	4391	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_17	19.5151096889779	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCTAAGTATAAAACTT	24	False	9555854	-5	True	AATAAA	-17	NA	9555830	9488485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
transcript_106644.known	chr2	+	863	6	FSM	ENSG00000134330.19	ENST00000482918.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	58.264912254289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGATGATTTTTCAGG	7	True	NA	-1	True	AATAAA	-2	NA	9473817	9488444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9473900_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_106646.known	chr2	+	2176	6	FSM	ENSG00000134330.19	ENST00000497473.6	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	29.962643408084	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	5	True	NA	NA	False	NA	NA	NA	9474550	9489742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9474648_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_106648.known	chr2	+	837	6	FSM	ENSG00000134330.19	ENST00000351760.11	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.7070498403545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	32	False	NA	17	True	AATAAA	-20	NA	9474577	9488462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9474648_9475986_9476040_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_106651.known	chr2	+	2137	5	FSM	ENSG00000134330.19	ENST00000470914.5	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	60.1123947285416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	-9	True	NA	NA	False	NA	NA	NA	9474536	9489742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9474648_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_106654.known	chr2	+	877	1	FSM	ENSG00000271855.1	ENST00000607241.1	877	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTGTTTTATTTAG	439	False	NA	19	True	AATAAA	-22	NA	9555898	9556775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9555900_9556800
transcript_106662.known	chr2	-	2196	6	FSM	ENSG00000134308.14	ENST00000238081.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	2338	junction_5	582.685026407921	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGATTGTGAGTGCCT	-4	True	NA	-7	True	AATAAA	-29	NA	9630997	9583966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
transcript_106672.known	chr2	-	2216	5	FSM	ENSG00000134308.14	ENST00000381844.8	2216	5	0	0	0	0	multi-exon	FALSE	canonical	3	3274	junction_3	299.838602418034	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTATGTGATTGTGAG	-16	True	NA	-12	True	AATAAA	-24	NA	9630616	9583971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158
transcript_106674.known	chr2	+	2267	15	FSM	ENSG00000115750.17	ENST00000263663.10	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	8.71545659581122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCAATTTTTGCA	4	True	NA	29	True	TATAAA	-45	NA	9843473	9934416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_106678.known	chr2	+	1592	14	FSM	ENSG00000115750.17	ENST00000434858.5	1592	14	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	19.9902343021692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATCAAGATCCAAG	4	True	NA	NA	False	AATACA	-10	NA	9843524	9933946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_106681.nic	chr2	+	1287	11	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-40	22860	-9	-2153	5prime_fragment	FALSE	canonical	3	52	junction_9	9.87927122818278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTTAATTTTTTATCA	-36	True	NA	NA	False	AATGAA	-13	NA	9843433	9911556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510
transcript_106684.known	chr2	+	273	3	FSM	ENSG00000115750.17	ENST00000625239.2	273	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	29.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAGAGCCTATTGATAG	-27	True	NA	NA	False	NA	NA	NA	9843442	9846113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9843560_9845219_9845319_9846056
transcript_106685.known	chr2	+	3568	16	FSM	ENSG00000134317.18	ENST00000324907.14	3568	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	5.78350143847902	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCATTTCCTGTTTTTC	-18	True	NA	11	True	ATTAAA	-22	NA	9951692	10002277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9951854_9954914_9955102_9958785_9958857_9961045_9961437_9962454_9962532_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
transcript_106687.known	chr2	-	1572	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTCTGGCTTCTTT	2433	False	NA	1	True	AATACA	-24	NA	10040663	10039091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10039100_10040700
transcript_106689.known	chr2	+	4035	4	FSM	ENSG00000172059.11	ENST00000305883.6	4035	4	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	5.8878405775519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCCTGTGTCATT	-6	True	NA	7	True	TATAAA	-17	NA	10043549	10054836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10043759_10046149_10046420_10047649_10048596_10052226
transcript_106690.known	chr2	+	4033	4	FSM	ENSG00000172059.11	ENST00000535335.1	4033	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	23.1564725772779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCCTGTGTCATT	24	False	NA	7	True	TATAAA	-17	NA	10044244	10054836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10044452_10046149_10046420_10047649_10048596_10052226
transcript_106695.known	chr2	+	3431	11	FSM	ENSG00000171848.16	ENST00000641198.1	3431	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	345.936410341554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTGGTAAAATTTGCA	263	False	NA	23	True	AATAAA	-20	NA	10120697	10131418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10120883_10122754_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_106696.known	chr2	+	3258	10	FSM	ENSG00000171848.16	ENST00000304567.10	3258	10	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_4	85.32219255979	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTGATTGGTAAAATT	0	True	NA	19	True	AATAAA	-16	NA	10122738	10131414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_106699.known	chr2	+	644	5	FSM	ENSG00000171848.16	ENST00000491447.1	644	5	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_4	55.3731658838467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCACTAATTGTT	13	False	NA	NA	False	CATAAA	-44	NA	10122751	10124878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716
transcript_106701.known	chr2	+	1996	12	FSM	ENSG00000171848.16	ENST00000641498.1	1996	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	507.501870696385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGGAAGGAAAAGA	0	True	NA	NA	False	AAGAAA	-43	NA	10122738	10199288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10141853_10141955_10142254_10142376_10198591
transcript_106707.known	chr2	+	1749	5	FSM	ENSG00000115756.13	ENST00000307845.8	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	12.2754836971909	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTTTCTGAGTTTTGC	7	True	NA	13	True	AATAAA	-1	NA	10302903	10427604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10303178_10396834_10396921_10419733_10420136_10422982_10423089_10426723
transcript_106712.known	chr2	-	2476	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_6	42.8231033651017	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTATCTTCACC	0	True	NA	NA	False	AATAAA	-22	NA	10448327	10439967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
transcript_106719.known	chr2	+	4242	4	FSM	ENSG00000257135.8	ENST00000553181.6	4242	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATCAAACAAAAATATTC	-13	True	NA	NA	False	AATAAA	-12	NA	10448688	10457692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10450282_10452280_10452470_10453868_10454059_10455422
transcript_106721.known	chr2	-	3498	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_10	27.6504520758703	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACTCCAAGAAAATTT	0	True	NA	NA	False	AATAAA	-29	NA	10689975	10570753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_106723.known	chr2	-	3333	20	FSM	ENSG00000115761.16	ENST00000345985.7	3333	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	56.4053886347396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTTTGAGAAAGACT	3	True	NA	NA	False	AATAAA	-17	NA	10689972	10570765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_106740.known	chr2	-	2509	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	3047.69408418385	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	NA	False	NA	-29	True	AATAAA	-14	NA	10812839	10783392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
transcript_106749.known	chr2	-	2279	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	0	0	0	multi-exon	FALSE	canonical	3	7534	junction_3	656.3326297186	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGAGCAATTTCTCT	25	False	10812810	-27	True	AATAAA	-16	NA	10812785	10783390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
transcript_10676.nic	chr1	-	1722	12	ISM	ENSG00000077254.14	ENST00000370792.7	2917	22	-6	13970	-6	-7598	5prime_fragment	FALSE	canonical	3	165	junction_11	83.8106878921697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAACGTTTCTCTTATTC	12	False	77759870	NA	False	AAAAAG	-1	NA	77759858	77725621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_10680.known	chr1	-	500	5	FSM	ENSG00000077254.14	ENST00000528150.1	500	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	152.320386028923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAACTCAGCCTTCATT	17	True	NA	NA	False	NA	NA	NA	77759811	77739330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77739418_77740876_77740935_77741375_77741430_77741616_77741749_77759642
transcript_106804.known	chr2	+	3102	13	FSM	ENSG00000143882.12	ENST00000381661.3	3102	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.53432938662683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGCCTACTTTGTTTA	19	False	NA	NA	False	AATAAA	-16	NA	10721648	10785110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10721732_10722823_10722979_10726501_10726570_10753980_10754067_10764330_10764426_10768718_10768811_10771838_10771938_10772541_10772611_10774787_10774881_10774977_10775072_10778571_10778670_10782242_10782376_10783173
transcript_106805.known	chr2	+	2292	1	FSM	ENSG00000162975.5	ENST00000295082.3	2292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCGTGTTGTAGGTTCT	-6	True	NA	15	True	AATAAA	-18	NA	10911933	10914225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10911900_10914200
transcript_106807.known	chr2	+	928	8	FSM	ENSG00000162976.13	ENST00000445921.5	928	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	68.4975792809274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGACTTGAAAGAAAGAGC	-23	True	NA	NA	False	AGTAAA	-33	NA	11155430	11177957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11172750_11172825_11174967_11175010_11177736
transcript_106808.known	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	32.8312182059833	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	13	True	NA	5	True	AATAAA	-16	NA	11155466	11178856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
transcript_106809.known	chr2	+	1784	6	FSM	ENSG00000162976.13	ENST00000441908.6	1784	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	56.8422378166096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTCAATCATTAATA	NA	False	NA	19	True	AATAAA	-30	NA	11155371	11178870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11177736
transcript_106810.known	chr2	+	696	6	FSM	ENSG00000162976.13	ENST00000402361.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	64.4502909225397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTAGGTTATGGTAGT	31	False	NA	NA	False	TTTAAA	-28	NA	11155534	11178024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11174967_11175010_11177736
transcript_106812.known	chr2	+	453	3	FSM	ENSG00000162976.13	ENST00000464700.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAAATGCAAACGTGT	11	False	NA	NA	False	ACTAAA	-16	NA	11155514	11160819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624
transcript_106822.known	chr2	-	2227	9	FSM	ENSG00000169016.17	ENST00000455198.5	2227	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.1430064762207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTGAGTGGAGTGAG	281	False	NA	NA	False	AATAAA	-10	NA	11465879	11445299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11458280_11458352_11465771
transcript_106824.known	chr2	-	1253	8	FSM	ENSG00000169016.17	ENST00000437573.5	1253	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.686928095213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTTGAGAATTTATGT	7	False	NA	NA	False	AAGAAA	-42	NA	11466153	11446476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11465771
transcript_106825.known	chr2	-	3296	8	FSM	ENSG00000169016.17	ENST00000444832.5	3296	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.2869852466762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	4	False	NA	0	True	TATAAA	-25	NA	11466156	11444374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11458280_11458352_11465771
transcript_106828.known	chr2	-	3230	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.2407909945038	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-1	True	NA	0	True	TATAAA	-25	NA	11466161	11444374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
transcript_10683.known	chr1	+	6409	16	FSM	ENSG00000180488.16	ENST00000443751.3	6409	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	7.36538450380487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTGCTGATGTATTGA	-19	True	NA	2	True	AATAAA	-12	NA	77779623	77879539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873000_77873121_77874845
transcript_106831.known	chr2	-	3191	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.7960372045236	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	NA	False	NA	0	True	TATAAA	-25	NA	11466177	11444374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
transcript_106835.known	chr2	-	1061	4	FSM	ENSG00000169016.17	ENST00000468775.1	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	43.8254111979188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGGTAAAAGTTGGTAG	57	False	NA	NA	False	NA	NA	NA	11466103	11451349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11451807_11453581_11453799_11457178_11457234_11465771
transcript_106839.nnic	chr2	+	1705	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	413	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_4	14.8856754409511	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	458	False	NA	9	True	AATAAA	-17	NA	11482753	11581265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
transcript_10684.known	chr1	+	5288	16	FSM	ENSG00000180488.16	ENST00000370791.8	6382	16	-25	1119	0	43	multi-exon	TRUE	canonical	3	23	junction_10	5.2620232695123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATATGTAACGGTTTCCA	-19	True	NA	NA	False	AGTAAA	-38	NA	77779623	77878421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873003_77873121_77874845
transcript_106845.nnic	chr2	+	1348	5	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	473	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	49.017216363233	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	-4	True	NA	9	True	AATAAA	-17	NA	11482813	11581265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_11482964_11556453_11556772_11576352_11576536_11578296_11578432_11580703
transcript_106848.known	chr2	+	5384	20	FSM	ENSG00000134324.12	ENST00000256720.6	5384	20	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	6.57199632791072	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGTGTGAATTTTAAA	-30	True	NA	20	True	AATAAA	-29	NA	11746587	11827409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
transcript_106849.nic	chr2	+	1743	8	ISM	ENSG00000134324.12	ENST00000256720.6	5384	20	-9	43096	-9	0	5prime_fragment	FALSE	canonical	3	42	junction_5	2.47435829652697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGTGAGAG	NA	False	NA	NA	False	NA	NA	NA	11746578	11784313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828
transcript_106853.known	chr2	+	1059	2	FSM	ENSG00000228496.2	ENST00000455754.2	1085	2	26	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGCGTCATGTGTCAT	25	False	NA	4	True	CATAAA	-16	NA	11681459	11683323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11681493_11682297
transcript_106857.nnic	chr2	+	2393	6	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-60	-1452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	119.412562153234	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGTGCACACAGACTGAC	327	False	NA	NA	False	NA	NA	NA	12716849	12741282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12717686_12717836_12718129_12718321_12718578_12723259_12723553_12740325
transcript_10686.known	chr1	+	1978	15	FSM	ENSG00000180488.16	ENST00000645756.1	1978	15	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_14	9.18433671074436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTCACATTATTCC	-13	True	NA	NA	False	AATAAA	-16	NA	77779629	77868636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77868247
transcript_106864.nnic	chr2	+	2586	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-60	-1452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129.340635532689	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGTGCACACAGACTGAC	327	False	NA	NA	False	NA	NA	NA	12716849	12741282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12717686_12717836_12718578_12723259_12723553_12740325
transcript_106870.nnic	chr2	+	2544	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-60	-1452	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_2	92.507769943935	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGTGCACACAGACTGAC	327	False	NA	NA	False	NA	NA	NA	12716849	12741282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12718129_12718321_12718578_12723259_12723553_12740325
transcript_106874.nic	chr2	+	1977	4	NIC	ENSG00000071575.12	novel	830	3	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	112.000992059098	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	327	False	NA	17	True	AATAAA	-23	NA	12716849	12724825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_12717011_12717251_12718578_12723259_12723553_12724628
transcript_106875.nic	chr2	+	2737	4	NIC	ENSG00000071575.12	novel	4344	3	NA	NA	-60	-1452	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	82.2408387332933	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGTGCACACAGACTGAC	327	False	NA	NA	False	NA	NA	NA	12716849	12741282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_12717011_12717251_12718578_12723259_12723553_12740325
transcript_106876.nic	chr2	+	4189	4	NIC	ENSG00000071575.12	novel	4344	3	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	82.2408387332933	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	327	False	NA	77	True	AATAAA	-22	NA	12716849	12742734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_12717011_12717251_12718578_12723259_12723553_12740325
transcript_106878.known	chr2	+	830	3	FSM	ENSG00000071575.12	ENST00000405331.3	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	136.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	-1	True	NA	17	True	AATAAA	-23	NA	12718237	12724825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_12718578_12723259_12723553_12724628
transcript_106879.known	chr2	+	4344	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	13	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-24	True	NA	77	True	AATAAA	-22	NA	12716935	12742734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_12718578_12723259_12723553_12740325
transcript_106882.known	chr2	+	2778	3	FSM	ENSG00000071575.12	ENST00000381465.2	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	147.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-25	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_12717011_12723259_12723553_12740325
transcript_106886.known	chr2	+	6319	2	FSM	ENSG00000162981.14	ENST00000295092.3	6319	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTTCTCTTGTCATT	8	True	NA	NA	False	AATAAA	-18	NA	14632716	14640041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_14632938_14633943
transcript_106890.known	chr2	+	3765	3	FSM	ENSG00000162981.14	ENST00000331243.4	3765	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGACTCCTTCTTGA	-9	True	NA	16	True	ATTAAA	-21	NA	14632699	14637227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_14632938_14633585_14633829_14633943
transcript_106891.known	chr2	-	7278	52	FSM	ENSG00000151779.13	ENST00000281513.10	7278	52	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_38	24.2373563435063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGCTGCCGCTTTTT	-11	True	NA	-27	True	AATAAA	-16	NA	15561334	15166915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
transcript_106899.known	chr2	+	2484	26	FSM	ENSG00000079785.16	ENST00000233084.8	2484	26	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_11	144.837586282015	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_106901.known	chr2	+	2451	26	FSM	ENSG00000079785.16	ENST00000678137.1	2451	26	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_18	343.614891411883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623468_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_106904.known	chr2	+	2705	25	FSM	ENSG00000079785.16	ENST00000679227.1	2705	25	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_11	147.534029737398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	168	False	NA	11	True	AATAAA	-14	NA	15591732	15631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628840_15629601_15629698_15629989_15630111_15630775
transcript_106905.known	chr2	+	2423	25	FSM	ENSG00000079785.16	ENST00000677437.1	2423	25	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	352.897293840573	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_106909.known	chr2	+	2430	23	FSM	ENSG00000079785.16	ENST00000678786.1	2430	23	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_20	366.640818335086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	168	False	NA	11	True	AATAAA	-14	NA	15591732	15631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15629601_15629698_15629989_15630111_15630775
transcript_106910.nic	chr2	+	1759	20	ISM	ENSG00000079785.16	ENST00000233084.8	2484	26	-23	3972	-1	-3968	5prime_fragment	FALSE	canonical	3	1246	junction_11	150.768410396234	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGAAAGATTTAAGGTAC	280	False	NA	5	True	NA	NA	NA	15591844	15627129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053
transcript_106913.nic	chr2	+	485	5	ISM	ENSG00000079785.16	ENST00000459706.2	3354	18	-184	25510	-49	-25510	5prime_fragment	FALSE	canonical	3	1506	junction_1	107.755220291177	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATTAAAACTGGTGCT	119	False	NA	41	True	AAAAAG	-7	NA	15591683	15597447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374
transcript_106914.known	chr2	+	2384	24	FSM	ENSG00000079785.16	ENST00000617198.5	2384	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	358.429450628021	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	287	False	NA	11	True	AATAAA	-14	NA	15591851	15631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_106915.known	chr2	-	770	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	0	6	0	multi-exon	FALSE	canonical	3	10	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGCGCCGCGGTGGT	4081	False	NA	NA	False	AATAAA	-23	NA	15941723	15939897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_15940352_15940973_15941098_15941531
transcript_106916.known	chr2	+	1693	2	FSM	ENSG00000134323.12	ENST00000638417.1	1693	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTCAACCTTTTCCTT	15	False	NA	19	True	AATAAA	-19	NA	15940565	15947007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15940744_15945492
transcript_106917.known	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	4566	False	NA	NA	False	NA	NA	NA	15941238	15940120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_15940352_15940973
transcript_106918.known	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	6.99704778359777	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-5	True	NA	0	True	ATTAAA	-23	NA	16665834	16549458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
transcript_10692.nic	chr1	+	925	6	ISM	ENSG00000162614.19	ENST00000401035.7	1263	9	-258	6900	-258	-6900	5prime_fragment	FALSE	canonical	3	42	junction_3	4.07921561087423	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTGAGGATCTAGAAA	36	False	NA	-51	True	TATAAA	-21	NA	77888254	77926484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413
transcript_106922.known	chr2	+	2428	4	FSM	ENSG00000163032.12	ENST00000295156.9	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	44.0100998509307	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTATTCATTCATTTA	-1	True	NA	NA	False	ACTAAA	-12	NA	17540695	17657018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17540919_17592069_17592237_17649409_17649626_17655196
transcript_106925.known	chr2	-	5173	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	0	0	0	0	multi-exon	TRUE	canonical	3	240	junction_26	39.1884575749109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17	True	NA	1	True	AATAAA	-19	NA	17753830	17663811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_106929.nic	chr2	-	2704	21	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-25	32540	-25	6805	5prime_fragment	FALSE	canonical	3	240	junction_20	31.5808090460013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTGGATACCTTAAA	NA	False	NA	19	True	AAGAAA	-9	NA	17753855	17696351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_106932.nic	chr2	-	2483	20	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-25	36542	-25	2803	5prime_fragment	FALSE	canonical	3	240	junction_19	31.4593348736511	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATGAAAATGGTTGAG	NA	False	NA	NA	False	AATAAA	-2	NA	17753855	17700353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_106936.nic	chr2	-	2377	18	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-25	39345	-25	0	5prime_fragment	FALSE	canonical	3	240	junction_17	32.7900947150002	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAATAATAATAATA	NA	False	NA	NA	False	TATAAA	-10	NA	17753855	17703156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_106945.nic	chr2	-	1354	12	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-25	53338	-25	-400	5prime_fragment	FALSE	canonical	3	240	junction_11	33.104392857237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAGCATTAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	17753855	17717149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_106952.known	chr2	+	9957	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	13.8918050850388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAGATGCCAGAAGCC	-7	True	NA	NA	False	ATTAAA	-26	NA	17754137	17788946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_106953.known	chr2	+	9854	14	FSM	ENSG00000178295.15	ENST00000317402.11	9854	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	14.5581876757503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGATGCCAGATGCCAG	-8	True	NA	NA	False	ATTAAA	-21	NA	17753857	17788941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17753968_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_106954.known	chr2	+	2341	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	2	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	8	True	NA	20	True	AATAAA	-20	NA	17878666	17932958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17878807_17917679_17917872_17930949
transcript_106956.known	chr2	-	1560	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTCTTTGGAGGC	6	True	NA	-7	True	AATAAA	-22	NA	18560653	18554722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_18555809_18560179
transcript_106957.known	chr2	-	1906	3	FSM	ENSG00000143867.7	ENST00000272223.3	1906	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGGATGGGTAATTTCC	-2	True	NA	NA	False	AATAAA	-18	NA	19358623	19351484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19352411_19353140_19353838_19358340
transcript_106959.nnic	chr2	-	887	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	32	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-17	True	NA	-11	True	AATAAA	-18	NA	19901699	19896630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_10696.nic	chr1	+	502	3	ISM	ENSG00000162614.19	ENST00000440324.5	1456	10	-178	18207	-29	-15672	5prime_fragment	FALSE	canonical	3	7	junction_2	23	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAATATATTAGAGAGAG	203	False	NA	NA	False	AAGAAA	-42	NA	77888483	77917712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_77888760_77916054_77916134_77917565
transcript_106961.nnic	chr2	-	764	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-58	-111	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	32	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-17	True	NA	-29	True	ATTAAA	-15	NA	19901699	19896753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_106968.known	chr2	-	6898	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_4	14.6188255058879	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTGTTTATTCCACG	5	True	NA	-1	True	AATAAA	-16	NA	19990105	19910262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_106972.known	chr2	-	2557	8	FSM	ENSG00000132031.13	ENST00000407540.8	2557	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	11.0711981542843	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAATTAACAGTTATTT	0	True	NA	50	True	ATTAAA	-18	NA	20012668	19992051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19993167_19994298_19994410_19997133_19997260_20000440_20000567_20001954_20002081_20003160_20003287_20005743_20006311_20012408
transcript_106973.known	chr2	-	1443	7	FSM	ENSG00000132031.13	ENST00000421259.2	1443	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	94.0273305421827	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCAATGTTCCTGCT	3	True	NA	NA	False	NA	NA	NA	20012665	19993036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19993167_19994298_19994410_19997133_19997260_20000440_20000567_20001954_20002081_20005743_20006311_20012408
transcript_106980.known	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3609	junction_3	333.62874409872	944	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-4	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
transcript_106986.known	chr2	-	3291	6	FSM	ENSG00000115884.11	ENST00000381150.5	3291	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	82.8507091098199	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTGCTGTGGTGGTGG	-12	True	NA	-10	True	AATAAA	-21	NA	20225433	20200798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801_20225087_20225261
transcript_106995.known	chr2	-	3165	5	FSM	ENSG00000115884.11	ENST00000254351.9	3165	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	14.7054411698527	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCTGTGGTGGTGGTT	-1	True	NA	-8	True	AATAAA	-23	NA	20225130	20200796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801
transcript_107.known	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2931.04131453311	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
transcript_107005.known	chr2	-	6309	21	FSM	ENSG00000055917.16	ENST00000361078.7	6309	21	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_20	115.238828091924	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20	True	NA	-10	True	AATAAA	-1	NA	20350844	20248736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
transcript_107016.known	chr2	+	2367	1	FSM	ENSG00000143878.10	ENST00000272233.6	2367	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGGCTCTTGTGGTTT	0	True	NA	115	True	ATTAAA	-22	NA	20447073	20449440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_20447100_20449400
transcript_107019.known	chr2	-	2383	7	FSM	ENSG00000118960.13	ENST00000304031.8	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.76017139089283	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-13	True	NA	-34	True	AATAAA	-19	NA	20651098	20617817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_107023.nic	chr2	-	2241	6	NIC	ENSG00000118960.13	novel	2383	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	16.2283702200806	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	476	False	NA	-34	True	AATAAA	-19	NA	20651122	20617817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20651031
transcript_107025.known	chr2	-	7728	6	FSM	ENSG00000118960.13	ENST00000651498.1	7728	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	15.6153770367545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATTGGAAAAAGAAGGAAA	468	False	NA	NA	False	AATAAA	-19	NA	20651130	20612296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20645339_20645506_20651031
transcript_10703.nic	chr1	-	2484	21	NIC	ENSG00000162613.17	novel	2524	20	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	266.812462227685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	370	False	NA	-24	True	AATAAA	-15	NA	77979132	77948404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969021_77969085_77969924_77970016_77978884
transcript_107037.known	chr2	-	1375	3	FSM	ENSG00000118960.13	ENST00000406618.3	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAGAAGCAAAACTGG	1	True	NA	NA	False	AATAAA	-25	NA	20651084	20640024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20641181_20645339_20645506_20651031
transcript_10704.known	chr1	-	6714	20	FSM	ENSG00000162613.17	ENST00000370768.7	6714	20	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_16	166.31513990546	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-1	True	NA	NA	False	AATAAA	-20	NA	77979072	77944054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_107040.known	chr2	-	3917	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	24.1367631080336	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	-13	True	NA	-16	True	TTTAAA	-7	NA	20823101	20684030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_107041.known	chr2	-	3807	6	FSM	ENSG00000118961.15	ENST00000541941.5	3807	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	56.9020210537376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20823036
transcript_107042.known	chr2	-	1179	6	FSM	ENSG00000118961.15	ENST00000626491.2	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	57.4887815143094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTTGGTAGGCAGGA	-13	True	NA	NA	False	NA	NA	NA	20823101	20686624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801309_20801466_20823036
transcript_107043.known	chr2	-	3728	6	FSM	ENSG00000118961.15	ENST00000440866.6	3728	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	52.1819892300016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_107044.known	chr2	-	3663	5	FSM	ENSG00000118961.15	ENST00000619656.4	3663	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	69.5323665640686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20823036
transcript_107049.known	chr2	-	8112	28	FSM	ENSG00000119778.15	ENST00000238789.10	8112	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	10.7402298729081	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCTTAATT	-1	True	NA	NA	False	AATAAA	-17	NA	23927123	23748663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_23752088_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786026_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746_23819883_23823257_23823570_23828848_23828940_23833918_23834079_23857414_23857504_23863380_23863556_23864808_23864925_23867834_23867947_23869662_23869762_23875828_23875905_23880638_23880756_23884764_23884874_23885726_23885830_23887831_23887986_23888349_23888400_23895818_23895971_23926554
transcript_107061.known	chr2	+	6022	7	FSM	ENSG00000173960.14	ENST00000309033.5	6022	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	44.3270672263448	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCCTTGTTATAAAATA	10	True	NA	20	True	ATTAAA	-17	NA	23940462	24004909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_23940649_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_107074.known	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	253.656933672234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	3	True	NA	14	True	AATAAA	-19	NA	24049730	24063681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
transcript_107078.nic	chr2	+	1136	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	245.447932360409	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	NA	False	NA	14	True	AATAAA	-19	NA	24049663	24063681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063018
transcript_107079.nic	chr2	+	1091	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	246.27360292975	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	NA	False	NA	14	True	AATAAA	-19	NA	24049663	24063681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063063
transcript_107082.known	chr2	+	953	5	FSM	ENSG00000119782.14	ENST00000452109.1	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	267.19316514462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACAAACTCCTGTCCA	43	False	NA	4	True	AATAAA	-9	NA	24049770	24063671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063063
transcript_107084.known	chr2	+	1010	4	FSM	ENSG00000119782.14	ENST00000380991.8	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_3	184.645606500669	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	12	True	NA	14	True	AATAAA	-19	NA	24049700	24063681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063018
transcript_107085.known	chr2	+	925	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	157.442758557586	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	13	True	NA	14	True	AATAAA	-19	NA	24049740	24063681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
transcript_107087.known	chr2	-	3848	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	26.0810701893581	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	0	True	NA	-15	True	AATAAA	-15	NA	24047391	24029346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
transcript_107088.known	chr2	-	3700	3	FSM	ENSG00000163026.12	ENST00000406895.3	3700	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	83	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-7	True	NA	-15	True	AATAAA	-15	NA	24047361	24029346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24031163_24037676_24039513_24047313
transcript_107091.known	chr2	-	651	4	FSM	ENSG00000115128.7	ENST00000233468.5	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	2344	junction_3	103.760407777833	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	6	True	NA	-7	True	AATAAA	-20	NA	24076326	24067585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24067852_24068320_24068460_24074075_24074195_24076199
transcript_10710.nic	chr1	-	1084	11	ISM	ENSG00000162613.17	ENST00000294623.8	2201	21	-123	17831	-100	756	5prime_fragment	FALSE	canonical	3	623	junction_7	75.6206982247585	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAGATGATCAAAAAAA	292	False	NA	-8	True	AAGAAA	-1	NA	77979210	77964312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_107104.known	chr2	-	1635	6	FSM	ENSG00000115129.14	ENST00000335934.8	1635	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	32.4616697044376	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	NA	False	NA	-5	True	AATAAA	-14	NA	24085215	24077432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_107108.nnic	chr2	-	1714	6	NNC	ENSG00000115129.14	novel	1635	6	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	67.8745902381738	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGGGTGGCACGCGGAC	-6	True	NA	-10	True	AATAAA	-9	NA	24085202	24077437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_24077859_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_107110.known	chr2	-	1653	5	FSM	ENSG00000115129.14	ENST00000238721.9	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	23.2849200127464	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-3	True	NA	-5	True	AATAAA	-14	NA	24084834	24077432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188
transcript_107114.nic	chr2	-	816	4	ISM	ENSG00000115129.14	ENST00000335934.8	1635	6	366	3313	-15	0	5prime_fragment	FALSE	canonical	3	110	junction_3	40.3236903073119	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	8	True	NA	-3	True	AATAAA	-22	NA	24084849	24080745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_24081032_24082884_24083153_24084188_24084332_24084730
transcript_107118.known	chr2	-	677	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	21	True	NA	-3	True	AATAAA	-22	NA	24084311	24080745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24081032_24082884_24083153_24084188
transcript_10712.known	chr1	-	802	9	FSM	ENSG00000162613.17	ENST00000421641.1	802	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	337.711322729932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTATTTTTGTGAAA	-5	True	NA	NA	False	ATTAAA	-10	NA	77979110	77965068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969021_77969085_77969924_77970016_77978884
transcript_107125.nic	chr2	-	2537	17	ISM	ENSG00000198399.16	ENST00000361999.7	5814	39	-498	72849	-271	10610	5prime_fragment	TRUE	canonical	3	33	junction_10	6.38571403603387	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATATAGCTGATATATTT	-35	True	NA	NA	False	AAAAAG	-24	NA	24360807	24275712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
transcript_10713.known	chr1	+	3778	6	FSM	ENSG00000137960.6	ENST00000370759.4	3778	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.81575680566778	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTAGTCCCATGTTA	-15	True	NA	NA	False	AGTAAA	-2	NA	78045965	78138444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_78046335_78080674_78080861_78094951_78095133_78119392_78119500_78125880_78125963_78135591
transcript_107136.known	chr2	-	4950	22	FSM	ENSG00000138031.15	ENST00000679454.1	4950	22	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_19	16.5014944695289	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGGAAATTCTGTT	-12	True	NA	-4	True	ATTAAA	-20	NA	24920237	24819168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826127_24827545_24827609_24827901_24828162_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24872569_24872720_24918312_24919185_24919682
transcript_107140.known	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	61.7341237956475	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	20	True	NA	25	True	AATAAA	-16	NA	24793461	24822373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_107147.known	chr2	+	4272	7	FSM	ENSG00000138092.11	ENST00000473706.5	4272	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	52.8130876035687	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTGGTGCTGGTGGTG	15	True	NA	28	True	AATAAA	-19	NA	24793144	24822376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793502_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_10715.known	chr1	+	949	3	FSM	ENSG00000162616.9	ENST00000487931.1	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	51	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGGCACTGAAAATATA	3	True	NA	NA	False	AATGAA	-22	NA	77979174	78016274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77979294_78013050_78013620_78016013
transcript_107153.nic	chr2	+	3870	7	NIC	ENSG00000138092.11	novel	4272	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	31	junction_3	72.877560942233	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	1	True	NA	25	True	AATAAA	-16	NA	24793442	24822373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_24793502_24799674_24799845_24814375_24814494_24815597_24815757_24816645_24816818_24817669_24817842_24819353
transcript_107161.known	chr2	+	748	4	FSM	ENSG00000138092.11	ENST00000486527.6	748	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	71.8068396618471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTTACTGCTGGCTTG	3	True	NA	NA	False	NA	NA	NA	24793444	24814782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375
transcript_107165.known	chr2	-	1120	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTGTCATTTCA	-1	True	NA	1	True	AATGAA	-18	NA	24793391	24789727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24790582_24793125
transcript_107166.known	chr2	-	624	2	FSM	ENSG00000184924.6	ENST00000474668.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTCTTATTAATAAG	5	True	NA	-4	True	ATTAAA	-16	NA	24793074	24790265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24790582_24792766
transcript_107167.known	chr2	+	7486	23	FSM	ENSG00000084710.14	ENST00000403714.8	7486	23	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_5	5.2742944379492	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGTTTGATTT	-16	True	NA	6	True	AATAAA	-18	NA	25042075	25159135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_25042320_25091324_25091402_25093002_25093131_25103636_25103788_25121672_25121795_25128182_25128333_25129974_25130110_25130551_25130631_25131367_25131504_25131749_25131912_25132902_25133015_25133382_25133435_25135466_25135640_25136522_25136599_25137340_25137503_25139058_25139191_25141365_25141434_25143734_25143863_25144959_25145052_25149693_25149743_25151913_25152021_25153711_25153762_25154234
transcript_107170.known	chr2	+	5162	19	FSM	ENSG00000084710.14	ENST00000401432.7	5162	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	5.61303597347337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCCACCTGTAACTCAGC	38	False	NA	NA	False	ACTAAA	-28	NA	25042129	25147888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_25042320_25091324_25091402_25093002_25093131_25103636_25103788_25121672_25121795_25128182_25128333_25129974_25130110_25130551_25130631_25131367_25131504_25131749_25131912_25132902_25133015_25133382_25133435_25135466_25135640_25136522_25136599_25137340_25137503_25139058_25139191_25141365_25141434_25143734_25143863_25144959
transcript_107176.known	chr2	-	883	4	FSM	ENSG00000115138.11	ENST00000449220.1	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	96.4238329229634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCCCCTGGTGACGCTG	378	False	NA	NA	False	NA	NA	NA	25168571	25161145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25161753_25164640_25164793_25165635_25165686_25168497
transcript_107177.known	chr2	-	1128	3	FSM	ENSG00000115138.11	ENST00000395826.7	1128	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	40.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCAGCATGGATCGGA	0	True	NA	54	True	AATAAA	-23	NA	25168580	25160859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25161753_25164640_25164793_25168497
transcript_107178.known	chr2	-	1426	3	FSM	ENSG00000115138.11	ENST00000405623.5	1426	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	106	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGACTTTGAATGTAAA	46	False	NA	-1	True	AATAAA	-22	NA	25168903	25160914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25161753_25164640_25164823_25168497
transcript_107180.known	chr2	-	9421	23	FSM	ENSG00000119772.19	ENST00000321117.10	9421	23	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_17	190.959949935422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAGCACCGTAATAAT	-16	True	NA	41	True	AATAAA	-28	NA	25341925	25227873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25341825
transcript_107181.known	chr2	-	9501	23	FSM	ENSG00000119772.19	ENST00000264709.7	9501	23	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_22	193.372462080073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTGTCTTGCGTCT	NA	False	NA	60	True	AAAAAG	-25	NA	25342590	25227854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25342429
transcript_107193.nic	chr2	-	3609	19	NIC	ENSG00000119772.19	novel	3589	19	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_17	122.896071720964	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGCTTTCCTGTCTAA	-14	True	NA	-23	True	AATAAA	-17	NA	25252293	25232976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249617_25249725_25252193
transcript_107195.known	chr2	-	3589	19	FSM	ENSG00000119772.19	ENST00000380746.8	3589	19	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_17	114.816224603053	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	878	False	NA	-22	True	AATAAA	-18	NA	25252311	25232975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
transcript_1072.known	chr1	-	2815	12	FSM	ENSG00000221978.13	ENST00000481223.6	2815	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	385.26498340495	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTATGTATGAAAACTC	12	True	NA	-42	True	AATAAA	-20	NA	1399311	1386707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1391576_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_107207.known	chr2	-	3585	18	FSM	ENSG00000119772.19	ENST00000683760.1	3585	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_17	102.150543630535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCACCTGGAGCAAATA	1057	False	NA	-61	True	NA	NA	NA	25252132	25233014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25251911
transcript_107208.known	chr2	-	2300	18	FSM	ENSG00000119772.19	ENST00000402667.1	2300	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_17	69.0315107828943	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGATGGAGAGAAGTAT	878	False	NA	-42	True	AATAAA	-12	NA	25252311	25234196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25252193
transcript_10721.known	chr1	+	2903	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	52.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	-2	True	NA	12	True	TATAAA	-16	NA	78004938	78017964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_78005322_78013050_78013620_78016013
transcript_107268.known	chr2	-	1775	4	FSM	ENSG00000119772.19	ENST00000406659.3	1775	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	20.0720922897661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAAGCTTTTATTCATT	NA	False	NA	-2	True	AATACA	-15	NA	25342590	25281451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25282712_25300138_25300244_25313912_25314162_25342429
transcript_10727.nic	chr1	+	5749	20	NIC	ENSG00000117114.21	novel	5733	21	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	75.3017199702033	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACATGTGAACTTTTA	-36	True	NA	8	True	AATAAA	-18	NA	81800908	81992422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
transcript_107273.known	chr2	-	2420	20	FSM	ENSG00000138101.20	ENST00000407661.7	2420	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.3468287740663	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	NA	False	NA	-17	True	AAAAAG	-7	NA	25673634	25377242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_107278.known	chr2	-	5342	8	FSM	ENSG00000084731.15	ENST00000264712.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	19.9550515316963	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTGCCTTACTTCTCT	-6	True	NA	-12	True	AATAAA	-21	NA	25982497	25926597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
transcript_107283.known	chr2	-	730	4	FSM	ENSG00000084731.15	ENST00000475453.1	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGGGCCCACGTGCTGG	2096	False	NA	NA	False	AATAAA	-18	NA	25980622	25954130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25954386_25955540_25955664_25956342_25956445_25980372
transcript_10729.known	chr1	-	7980	21	FSM	ENSG00000137941.17	ENST00000260505.13	7980	21	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	5.77472943089111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGTCATCAAATGCTT	6	True	NA	NA	False	AATAAA	-23	NA	83999132	83865023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_83870083_83882962_83883137_83890320_83890482_83904078_83904160_83906328_83906464_83907455_83907662_83911164_83911364_83917603_83917691_83919698_83919835_83921086_83921161_83921246_83921395_83929135_83929231_83933607_83933767_83937851_83938017_83942462_83942680_83947123_83947283_83948627_83948696_83949864_83949987_83951844_83951977_83952186_83952388_83998930
transcript_107290.known	chr2	+	3561	6	FSM	ENSG00000084733.11	ENST00000264710.5	3561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_3	92.2726394983909	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGGTTTGGTTTTCA	-32	True	NA	16	True	TATAAA	-19	NA	26034083	26137454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26034736_26098661_26098723_26109767_26109907_26127143_26127234_26127849_26127952_26134937
transcript_107294.known	chr2	+	1292	5	FSM	ENSG00000084733.11	ENST00000495146.5	1292	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	585.214650790631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTATAAGAATAAAGTT	-9	True	NA	-21	True	ATTAAA	-33	NA	26034106	26135347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26034736_26098661_26098723_26127143_26127234_26127849_26127952_26134937
transcript_107299.nic	chr2	+	1302	3	ISM	ENSG00000084733.11	ENST00000264710.5	3561	6	0	27098	0	-24680	5prime_fragment	FALSE	canonical	3	1410	junction_1	49	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATGTTGTTATTTGCTA	-32	True	NA	NA	False	NA	NA	NA	26034083	26110356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_26034736_26098661_26098723_26109767
transcript_1073.known	chr1	-	1186	6	FSM	ENSG00000221978.13	ENST00000408918.8	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	190.28189614359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGATTTCATTTGTTT	6	True	NA	-41	True	AATACA	-18	NA	1399317	1392287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_107300.nnic	chr2	+	627	3	NNC	ENSG00000157833.13	novel	4164	6	NA	NA	23	-10442	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	67	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGCTAATGGACTACC	2	True	NA	16	True	ATTAAA	-18	NA	26173110	26177016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_26173333_26176343_26176485_26176752
transcript_107301.known	chr2	+	4164	6	FSM	ENSG00000157833.13	ENST00000401533.7	4164	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	30.7349963396777	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCAGCTGCTTT	-21	True	NA	33	True	AATAAA	-33	NA	26173087	26189663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26173333_26176343_26176485_26182966_26183098_26184232_26185277_26186188_26186359_26187230
transcript_107302.known	chr2	+	273	2	FSM	ENSG00000157833.13	ENST00000496070.1	273	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCCCTCCTCTATTCA	215	False	NA	NA	False	GGGGCT	-24	NA	26185231	26187458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26185277_26187230
transcript_107305.known	chr2	-	2688	20	FSM	ENSG00000084754.12	ENST00000643233.1	2688	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	232.481709285601	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTCTGTGTCAGCA	-5	True	NA	-38	True	AATAAA	-1	NA	26244626	26190888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_107310.known	chr2	-	2977	19	FSM	ENSG00000084754.12	ENST00000643057.1	2977	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	235.394999002858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCGGGATATTAAACCT	11	True	NA	-56	True	NA	NA	NA	26244610	26190670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_107312.known	chr2	-	2158	19	FSM	ENSG00000084754.12	ENST00000646483.1	2158	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	235.726883448297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTCATGCCTCGCTC	98	False	NA	NA	False	NA	NA	NA	26244596	26191249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26238933_26239005_26239101_26239144_26244529
transcript_107315.known	chr2	+	1997	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	46.4492076239077	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	17	True	NA	24	True	AATAAA	-17	NA	26244938	26290465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_107319.known	chr2	+	2142	15	FSM	ENSG00000138029.14	ENST00000537713.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	120.003571375427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	0	True	NA	23	True	AATAAA	-16	NA	26244747	26290464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_107328.known	chr2	+	670	3	FSM	ENSG00000138029.14	ENST00000479347.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATGAAATGAAAGAGTAA	-2	True	NA	NA	False	AATAGA	-41	NA	26244919	26254956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26244991_26254246_26254319_26254429
transcript_107330.known	chr2	+	2567	2	FSM	ENSG00000286707.1	ENST00000653720.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAAATAATTCCTCCT	NA	False	NA	-11	True	TTTAAA	-30	NA	26298569	26306340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26298627_26303830
transcript_107336.known	chr2	-	590	5	FSM	ENSG00000157884.11	ENST00000403670.7	590	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCATCAGATCATCGCT	NA	False	NA	NA	False	GATAAA	-17	NA	26605563	26581206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26581394_26582824_26582914_26583788_26583899_26595175_26595318_26605501
transcript_107339.known	chr2	+	3902	6	FSM	ENSG00000213699.9	ENST00000344420.10	3902	6	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	2.60768096208106	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTTCTGCAGGCTATA	-9	True	NA	30	True	TATAAA	-20	NA	26764283	26781231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041
transcript_107343.known	chr2	+	745	6	FSM	ENSG00000115163.15	ENST00000460030.1	745	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	176.595130170682	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	27	False	NA	NA	False	AATAAA	-30	NA	26786142	26801067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786297_26792130_26792241_26792755_26792834_26793144_26793327_26793811_26793894_26800928
transcript_107344.nnic	chr2	+	825	6	NNC	ENSG00000115163.15	novel	745	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	229.732888372562	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	6161	False	NA	NA	False	AATAAA	-30	NA	26786001	26801067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_26786297_26792130_26792241_26792755_26792834_26793205_26793327_26793811_26793894_26800928
transcript_107347.known	chr2	+	3605	5	FSM	ENSG00000213699.9	ENST00000414029.1	3605	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	9.93415824315276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATCCATTCTCGA	32	True	NA	14	True	AAAAAG	-18	NA	26764324	26781147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26764427_26774250_26774324_26775463_26775677_26776371_26776483_26778041
transcript_107348.known	chr2	+	689	5	FSM	ENSG00000115163.15	ENST00000472719.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	209.72064752904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTGAAAACATCAGAT	-34	True	NA	38	True	NA	NA	NA	26786026	26794076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_107349.known	chr2	+	1389	5	FSM	ENSG00000115163.15	ENST00000335756.9	1389	5	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	63.2114507031756	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTTACTGTTACAGCAT	-5	True	NA	11	True	AATAAA	-22	NA	26786055	26794589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786297_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_10735.nic	chr1	-	498	3	ISM	ENSG00000137941.17	ENST00000610996.1	2028	15	-14	38918	-14	-2601	5prime_fragment	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGTCAGAAAGAAGAAA	-26	True	NA	NA	False	AATACA	-29	NA	83999164	83951913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_83951977_83952186_83952388_83998930
transcript_107350.nic	chr2	+	808	5	NIC	ENSG00000115163.15	novel	745	6	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	235.672442173454	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	6161	False	NA	NA	False	AATAAA	-30	NA	26786001	26801067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_26786297_26792130_26792241_26793144_26793327_26793811_26793894_26800928
transcript_107353.known	chr2	+	1299	4	FSM	ENSG00000115163.15	ENST00000233505.12	1299	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	217.663859093685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTTACTGTTACAGCAT	7	True	NA	11	True	AATAAA	-22	NA	26786067	26794589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786297_26792130_26792241_26793144_26793327_26793811
transcript_107358.known	chr2	+	1972	13	FSM	ENSG00000157851.17	ENST00000401478.5	1972	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.3817542386163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTGTAGTCCTTTCT	87	False	NA	4	True	NA	NA	NA	26848288	26947197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26848360_26898495_26898761_26924886_26925046_26927252_26927433_26928254_26928324_26931639_26931685_26933257_26933334_26934577_26934735_26940030_26940173_26941949_26942093_26942542_26942751_26944655_26944825_26946909
transcript_107361.known	chr2	+	5178	13	FSM	ENSG00000157851.17	ENST00000288699.11	5178	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_11	5.34568881332321	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGACTCTGTTGTGTTTC	4	True	NA	25	True	ATTAAA	-17	NA	26848131	26950351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26848255_26898495_26898761_26924886_26925046_26927252_26927433_26928254_26928324_26931639_26931685_26933257_26933334_26934577_26934735_26940030_26940173_26941949_26942093_26942542_26942751_26944655_26944825_26946909
transcript_107366.known	chr2	+	1801	7	FSM	ENSG00000084764.12	ENST00000405074.7	1801	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	15.0711276581711	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	3	True	NA	10	True	AATAAA	-18	NA	26970657	27027196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26970803_27022211_27022340_27023331_27023478_27024095_27024253_27025582_27025738_27025879_27026033_27026279
transcript_107367.known	chr2	+	1890	7	FSM	ENSG00000084764.12	ENST00000233121.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	15.3514385862259	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGTCCAGGTCCAGTG	-18	True	NA	33	True	AATAAA	-41	NA	26970636	27027219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26970803_27022211_27022340_27023331_27023478_27024095_27024298_27025582_27025738_27025879_27026033_27026279
transcript_107368.nnic	chr2	+	1680	6	NIC	ENSG00000084764.12	novel	1801	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	24.3688325530789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	168	False	NA	10	True	AATAAA	-18	NA	26970621	27027196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_26970803_27022211_27022340_27023331_27023478_27025582_27025738_27025879_27026033_27026279
transcript_10737.known	chr1	-	1601	1	FSM	ENSG00000271576.1	ENST00000605506.1	1601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTGCATAATTTG	-15	True	NA	-17	True	AATAAA	-19	NA	84077931	84076330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84076300_84077900
transcript_107370.nic	chr2	+	3785	5	NIC	ENSG00000084764.12	novel	1801	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	59	junction_3	3.20156211871642	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	168	False	NA	10	True	AATAAA	-18	NA	26970621	27027196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_26970803_27022211_27022340_27023331_27025738_27025879_27026033_27026279
transcript_107373.nic	chr2	+	3129	18	NIC	ENSG00000119777.20	novel	2775	19	NA	NA	-19	0	intron_retention	TRUE	canonical	0	0	junction_11	120.709895587452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCTTGTCTGCATCCT	9557	False	NA	20	True	AATAAA	-20	NA	27032890	27041693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27037814_27037893_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_107375.known	chr2	+	2700	18	FSM	ENSG00000119777.20	ENST00000321326.11	2700	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	105.605127274079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	-21	True	NA	21	True	AATAAA	-21	NA	27032953	27041694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710_27040955_27041243
transcript_10738.known	chr1	+	4513	10	FSM	ENSG00000142875.20	ENST00000370689.6	4513	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	19.6299091524473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCGTGAATTCT	-10	True	NA	23	True	ATTAAA	-23	NA	84078061	84238498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84214152_84214318_84235179
transcript_107381.known	chr2	+	2978	17	FSM	ENSG00000119777.20	ENST00000238788.14	2978	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	81.2095091414792	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	-10	True	NA	21	True	AATAAA	-21	NA	27032964	27041694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_107391.known	chr2	+	2830	16	FSM	ENSG00000119777.20	ENST00000404032.7	2830	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.119208133731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCTTGTCTGCATCCT	2	True	NA	20	True	AATAAA	-20	NA	27032976	27041693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_107437.known	chr2	+	3261	16	FSM	ENSG00000084693.16	ENST00000487078.5	3261	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	153.191586656129	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTAGTTGCTTTGTATGT	-11	True	NA	19	True	AATAAA	-20	NA	27051645	27070622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069047_27069095_27069572_27069707_27070091
transcript_10744.known	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	48.8042966858452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	1	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
transcript_107442.known	chr2	+	3188	15	FSM	ENSG00000084693.16	ENST00000360131.5	3188	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	137.658572755427	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	11	True	NA	15	True	AATAAA	-16	NA	27051667	27070618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069572_27069707_27070091
transcript_10745.known	chr1	+	1567	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.02768199119819	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	24	True	AATAAA	-17	NA	84298365	84350798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
transcript_107463.nic	chr2	+	2661	12	ISM	ENSG00000084693.16	ENST00000487078.5	3261	16	-36	2787	-36	0	5prime_fragment	FALSE	canonical	3	100	junction_11	83.8907199430425	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGAACATTTACTATG	NA	False	NA	2	True	AATAAA	-14	NA	27051609	27067835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493
transcript_10747.known	chr1	+	1948	9	FSM	ENSG00000117133.11	ENST00000370654.6	1948	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	22.5662219921723	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCCAGTGTATATAAA	2	True	NA	20	True	AATAAA	-27	NA	84479265	84498352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84479510_84480955_84481013_84482914_84482996_84489632_84489729_84490318_84490473_84495372_84495456_84495881_84496064_84496243_84496371_84497428
transcript_107472.known	chr2	+	2382	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	31.8684797252709	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	21	False	NA	26	True	AATAAA	-18	NA	27051677	27059535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
transcript_107484.known	chr2	+	1850	7	FSM	ENSG00000084693.16	ENST00000489683.5	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	29.3995464817628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTCAAACTGAGAATT	24	False	NA	NA	False	AAAAAG	-23	NA	27051680	27056464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681
transcript_107488.known	chr2	-	442	3	FSM	ENSG00000228474.6	ENST00000456793.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	3781	junction_2	477.5	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-1	True	NA	-1	True	TATAAA	-30	NA	27071654	27070471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27070722_27071325_27071464_27071600
transcript_107489.known	chr2	-	559	2	FSM	ENSG00000228474.6	ENST00000429985.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	4736	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGTCCCAAAATCTTG	4	True	NA	-16	True	TATAAA	-15	NA	27071649	27070486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27070722_27071325
transcript_107490.known	chr2	-	458	3	FSM	ENSG00000228474.6	ENST00000447619.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1888.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	4	True	NA	-1	True	TATAAA	-30	NA	27071649	27070471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27070743_27071325_27071464_27071600
transcript_107493.known	chr2	+	3890	8	FSM	ENSG00000138080.14	ENST00000380320.9	3890	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.53409053624371	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACGAACCGTTCTGCTA	0	True	NA	NA	False	AATAAA	-25	NA	27078614	27086403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27079236_27080150_27080271_27080731_27080953_27082082_27084012_27084414_27084532_27084990_27085009_27085159_27085298_27085677
transcript_107499.nnic	chr2	+	2016	7	NIC	ENSG00000138080.14	novel	3890	8	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	6.48074069840786	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACGAACCGTTCTGCTA	8040	False	NA	NA	False	AATAAA	-25	NA	27078559	27086403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27079236_27080150_27080271_27080731_27080953_27084414_27084532_27084990_27085009_27085159_27085298_27085677
transcript_107504.known	chr2	+	2411	8	FSM	ENSG00000138030.13	ENST00000260599.10	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	62.434945735378	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTACAAGGCTCT	-25	True	NA	19	True	TATAAA	-16	NA	27086746	27100751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27087352_27092331_27092449_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_107505.nnic	chr2	+	1518	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-24	0	intron_retention	FALSE	canonical	3	34	junction_2	59.713203453396	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	3068	False	NA	8	True	AATAAA	-16	NA	27086722	27099969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27087352_27092331_27092449_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_107511.nnic	chr2	+	1396	6	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-19	0	intron_retention	FALSE	canonical	3	90	junction_1	40.5265345175232	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	3073	False	NA	8	True	AATAAA	-16	NA	27086727	27099969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27087352_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_107526.known	chr2	-	2030	9	FSM	ENSG00000138073.14	ENST00000444452.5	2030	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	164.172498838874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCAAATGGTACTCTTG	18	True	NA	-13	True	AATAAA	-20	NA	27134615	27130764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133655_27134286
transcript_107527.known	chr2	-	2127	9	FSM	ENSG00000138073.14	ENST00000260643.7	2127	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	24.3657033553312	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	-3	True	NA	-4	True	AATAAA	-29	NA	27134636	27130755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286
transcript_10753.known	chr1	-	6571	7	FSM	ENSG00000117151.13	ENST00000370630.6	6571	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	13.4339950209244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCTGTCTCAAAAAA	6	True	NA	-3	True	AATAAA	-20	NA	84574440	84549610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84574238
transcript_107534.nic	chr2	-	2387	8	NIC	ENSG00000138073.14	novel	2127	9	NA	NA	-36	0	intron_retention	FALSE	canonical	3	470	junction_1	23.5111784095158	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	4754	False	NA	-4	True	AATAAA	-29	NA	27134702	27130755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133722_27134286
transcript_107536.known	chr2	-	1910	8	FSM	ENSG00000138073.14	ENST00000406567.7	1910	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	169.581597962005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACTGAGACCCCAAAT	21	True	NA	-23	True	AATAAA	-10	NA	27134612	27130774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286
transcript_10754.known	chr1	-	1633	7	FSM	ENSG00000117151.13	ENST00000370625.1	1633	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	24.5045347277238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACACACGAATGTCC	25	True	NA	NA	False	AATAAA	-26	NA	84574421	84554852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84573915
transcript_107558.known	chr2	-	2230	18	FSM	ENSG00000138074.15	ENST00000408041.5	2230	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	297.885837727038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTCAGGACCCCGCC	-2	True	NA	NA	False	NA	NA	NA	27211752	27200435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27208613_27208687_27211466_27211534_27211710
transcript_107577.nic	chr2	-	3047	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	125	junction_16	179.26402272556	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-9	True	NA	-1	True	AATAAA	-21	NA	27211793	27199586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211710
transcript_107578.nic	chr2	-	3143	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	282	junction_16	143.370150310307	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-8	True	NA	-1	True	AATAAA	-21	NA	27211945	27199586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
transcript_107579.nic	chr2	-	3061	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	34	0	intron_retention	FALSE	canonical	3	301	junction_16	139.102353839718	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	785	False	NA	-1	True	AATAAA	-21	NA	27211996	27199586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
transcript_107580.known	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_16	179.26402272556	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	17	True	NA	-1	True	AATAAA	-21	NA	27212268	27199586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
transcript_10762.known	chr1	-	2892	6	FSM	ENSG00000117151.13	ENST00000477677.5	2892	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	21.9581419979014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATTGTAGAGATGTAT	-34	True	NA	-3	True	AATAAA	-23	NA	84574480	84553120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84574238
transcript_107674.known	chr2	+	1256	7	FSM	ENSG00000138085.18	ENST00000380171.9	1227	7	-10	-19	-10	-2	multi-exon	FALSE	canonical	3	1749	junction_1	154.591307071977	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAAGGCGCCCTGCCTT	-14	True	NA	47	True	AATAAA	-35	NA	27212030	27217176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27212468_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_107675.known	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	625.831557920251	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	23	True	NA	49	True	AATAAA	-37	NA	27212369	27217178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_10768.known	chr1	-	5752	14	FSM	ENSG00000117155.17	ENST00000342203.8	5752	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	36.7101230738154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTGGAATGAATG	-3	True	NA	NA	False	AATACA	-17	NA	84690461	84643705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
transcript_107684.known	chr2	-	2936	8	FSM	ENSG00000115194.11	ENST00000233535.9	2936	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	15.0400825008593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	-3	True	NA	NA	False	NA	NA	NA	27263047	27253683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27262811
transcript_107691.known	chr2	-	904	7	FSM	ENSG00000115194.11	ENST00000445870.5	904	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	34.9030403005558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGCAGGTCGAGCAG	2184	False	NA	NA	False	NA	NA	NA	27262871	27255385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27258160_27258308_27258752_27258935_27262811
transcript_10770.nic	chr1	-	2185	14	NIC	ENSG00000117155.17	novel	2457	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_13	49.1346417281278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGATGGTCTGAGTT	3	True	NA	-5	True	CATAAA	-17	NA	84690312	84647340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690153
transcript_107700.known	chr2	+	2027	10	FSM	ENSG00000138100.14	ENST00000296098.4	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.5179259164441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTGGTGGCTCTGCCC	33	False	NA	13	True	ATTAAA	-18	NA	27282461	27307439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27299529_27299656_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_107701.known	chr2	+	1930	9	FSM	ENSG00000138100.14	ENST00000380075.7	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	6.74073438135638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTGCCCTGGTGGCTCT	0	True	NA	9	True	ATTAAA	-14	NA	27282428	27307435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_107708.known	chr2	-	905	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_6	153.00366808995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGGTGCCTCAGTA	10	True	NA	-53	True	NA	NA	NA	27323083	27309539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_107710.known	chr2	-	1002	8	FSM	ENSG00000115204.15	ENST00000380044.6	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_7	77.7741366170696	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-4	True	NA	-5	True	ATTAAA	-15	NA	27323097	27309491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_107714.nnic	chr2	-	892	7	NIC	ENSG00000115204.15	novel	1002	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_5	162.089224400226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGCAGTGGTAATGAGT	-12	True	NA	-7	True	ATTAAA	-13	NA	27323105	27309493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27322447_27322523_27323051
transcript_10772.known	chr1	-	1933	13	FSM	ENSG00000117155.17	ENST00000605755.5	1933	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	60.8698520524643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGTGTGTCATAAAG	14	True	NA	-40	True	NA	NA	NA	84690444	84647375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84690370
transcript_107721.known	chr2	-	590	2	FSM	ENSG00000115204.15	ENST00000494436.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTTAAATGGCATTAA	16	True	NA	NA	False	NA	NA	NA	27323077	27321958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27322523_27323051
transcript_10773.known	chr1	-	5843	13	FSM	ENSG00000117155.17	ENST00000437941.6	5843	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	63.2184813870824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTACTGGAATGAAT	-10	True	NA	NA	False	AATACA	-16	NA	84690468	84643706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84690153
transcript_107735.nnic	chr2	-	4314	20	NNC	ENSG00000115207.14	novel	3882	19	NA	NA	-356	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_19	112.372648755672	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	NA	False	NA	-7	True	ATTAAA	-24	NA	27357390	27325848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350390_27356738
transcript_107745.nnic	chr2	-	3450	20	NNC	ENSG00000115207.14	novel	3882	19	NA	NA	-4	-33	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_19	112.372648755672	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTGTGAATGGGTGTAT	4	True	NA	-29	True	AGTAAA	-21	NA	27357003	27326325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350390_27356738
transcript_107751.known	chr2	-	3882	19	FSM	ENSG00000115207.14	ENST00000264720.7	3882	19	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_18	57.5627676734035	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27	True	NA	-7	True	ATTAAA	-24	NA	27357034	27325848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_107760.known	chr2	-	3992	19	FSM	ENSG00000115207.14	ENST00000359541.6	3992	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	102.515716952193	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	515	False	NA	-7	True	ATTAAA	-24	NA	27356492	27325848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356086
transcript_10777.nic	chr1	-	884	6	ISM	ENSG00000117155.17	ENST00000342203.8	5752	14	-34	20714	-27	1699	5prime_fragment	FALSE	canonical	3	119	junction_5	53.4288311681998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAAACAGCTGGCAAAG	-37	True	NA	NA	False	AAGAAA	-11	NA	84690495	84664419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
transcript_107786.known	chr2	-	1771	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	15	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	246.92005749412	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGCAACTCTGCTGC	143	False	NA	-12	True	AATAAA	-14	NA	27370300	27364362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367803_27367804_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
transcript_107789.known	chr2	-	1754	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-119	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	249.249215841561	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	9968	False	NA	-1	True	AATAAA	-25	NA	27370457	27364351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369892_27369893_27369920_27370283
transcript_107792.nic	chr2	-	2100	13	NNC	ENSG00000115207.14	novel	604	4	NA	NA	0	2023	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	135.927140409853	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGCTTGTTTTTTGGT	-27	True	NA	-7	True	AATAAA	-32	NA	27357034	27333604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27333648_27333649_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_107797.known	chr2	-	1570	13	FSM	ENSG00000115211.17	ENST00000405940.6	1570	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	197.325168750016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATACTCCCTACCCTC	18	True	NA	-26	True	NA	NA	NA	27370315	27364376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368114_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_107798.known	chr2	-	1608	13	FSM	ENSG00000115211.17	ENST00000445933.6	1608	13	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_10	122.070562471966	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCCATACTCCCTAC	-1	True	NA	-30	True	NA	NA	NA	27370334	27364380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
transcript_107800.known	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_10	99.4915895384574	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-5	True	NA	-1	True	AATAAA	-25	NA	27370338	27364351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_10782.known	chr1	-	3515	3	FSM	ENSG00000171517.6	ENST00000370611.4	3515	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	8	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTGTTGAGGTGCAT	-11	True	NA	-12	True	AATAAA	-17	NA	84893206	84811601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84814172_84865384_84866139_84893015
transcript_10784.known	chr1	-	3044	14	FSM	ENSG00000153898.13	ENST00000370608.8	3044	14	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	2.26629536348557	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATTCTTACTATTTT	-13	True	NA	-6	True	AATAAA	-19	NA	84997113	84925582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84926722_84929557_84929680_84931361_84931569_84937754_84937878_84937980_84938083_84939552_84939703_84940878_84940992_84947032_84947133_84952242_84952340_84952445_84952531_84956430_84956585_84958528_84958703_84965548_84965709_84996795
transcript_107863.known	chr2	-	1949	12	FSM	ENSG00000115211.17	ENST00000493344.6	1949	12	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_10	103.894892850085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGAAACACAGGGTTAAT	7	True	NA	-48	True	NA	NA	NA	27370326	27364398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875
transcript_107866.known	chr2	+	2007	16	FSM	ENSG00000115234.11	ENST00000427123.5	2007	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	346.180659322396	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACCTCTGGTTCCCTCT	13	True	NA	16	True	ATTAAA	-16	NA	27370627	27377123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373039_27373114_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_10787.known	chr1	-	2810	13	FSM	ENSG00000055732.13	ENST00000370589.7	2810	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.74341649025257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-22	True	NA	NA	False	ATTAAA	-17	NA	85048500	85018081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85048395
transcript_107877.known	chr2	+	2357	15	FSM	ENSG00000115234.11	ENST00000233575.7	2357	15	0	0	0	0	multi-exon	FALSE	canonical	3	955	junction_3	55.1195824308107	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTAGTTCAGGATGAGT	1	True	NA	NA	False	TATAAA	-14	NA	27370615	27377535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_10788.known	chr1	-	2777	11	FSM	ENSG00000055732.13	ENST00000490600.6	2777	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	13.720058308914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAGAAAAAAAAAACAGA	-21	True	NA	NA	False	NA	NA	NA	85048499	85024556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85036709_85036869_85041009_85041178_85045132_85045363_85047574_85047610_85048395
transcript_107901.known	chr2	+	1955	14	FSM	ENSG00000115234.11	ENST00000440760.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	281.866160694005	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGGTTCCCTCTCACT	2	True	NA	20	True	ATTAAA	-20	NA	27370616	27377127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27371268_27371469_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_107902.known	chr2	+	2400	14	FSM	ENSG00000115234.11	ENST00000537606.5	2400	14	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	265.551140618947	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACCTAGTTCAGGATGA	NA	False	NA	NA	False	TATAAA	-12	NA	27370495	27377533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_10791.known	chr1	-	3000	3	FSM	ENSG00000097096.9	ENST00000234668.6	3000	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	1220	False	NA	NA	False	NA	NA	NA	85200513	85181158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85183201_85190056_85190753_85200251
transcript_107935.known	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	14.7044966667418	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-2	True	NA	-42	True	AATAAA	-16	NA	27380734	27377234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
transcript_107938.known	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	14.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	5830	False	NA	-42	True	AATAAA	-16	NA	27380444	27377234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27378372_27378466_27379055_27380092
transcript_107939.nic	chr2	-	2087	11	NIC	ENSG00000115241.11	novel	2210	10	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_6	290.267738476049	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTACGCATCGTGTCCTTT	NA	False	NA	-8	True	ACTAAA	-14	NA	27409675	27381198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27384768_27384974_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
transcript_107948.known	chr2	-	2210	10	FSM	ENSG00000115241.11	ENST00000344034.5	2210	10	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_9	51.867590204098	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTACGCATCGTGTCCTTT	-20	True	NA	-8	True	ACTAAA	-14	NA	27409591	27381198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
transcript_10796.known	chr1	-	5466	7	FSM	ENSG00000097096.9	ENST00000341460.6	5466	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	13.271732701079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATTAAAATATTATAAT	4	True	NA	NA	False	AATAAA	-21	NA	85201016	85156888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85159250_85164525_85164758_85169043_85169226_85178145_85178273_85182097_85183201_85190056_85190753_85200251
transcript_107968.nic	chr2	-	643	4	ISM	ENSG00000115241.11	ENST00000344034.5	2210	10	-84	4567	-84	830	5prime_fragment	FALSE	canonical	3	903	junction_3	29.7806797922561	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTGATGAAGATGATGG	NA	False	NA	18	True	AAAAAG	-6	NA	27409675	27385765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_27385880_27386193_27386280_27387088_27387159_27409302
transcript_10797.known	chr1	-	3391	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	109.77552854196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-13	True	NA	-10	True	ATTAAA	-16	NA	85259672	85249952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
transcript_107972.known	chr2	+	2887	19	FSM	ENSG00000115216.14	ENST00000233557.7	2887	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	334.094764592915	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	NA	False	NA	31	True	AATAAA	-20	NA	27427789	27442259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27428183_27428317_27428732_27433248_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_107975.known	chr2	+	2176	18	FSM	ENSG00000115216.14	ENST00000379852.8	2176	18	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	290.169679509377	2313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	5	True	NA	31	True	AATAAA	-20	NA	27428630	27442259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_108.known	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_3	3093.43250559418	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
transcript_108012.known	chr2	-	5340	48	FSM	ENSG00000138002.16	ENST00000675690.1	5340	48	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_33	12.7101973724889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACCACTGTATTCTTT	14	True	NA	-13	True	ATTAAA	-14	NA	27489754	27444376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27444522_27445013_27445106_27445295_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997_27450097_27453383_27453514_27453629_27453740_27453981_27454163_27454353_27454419_27454566_27454661_27456510_27456654_27457638_27457756_27457840_27457977_27458125_27458224_27458778_27458869_27459377_27459523_27459708_27459830_27461014_27461094_27461268_27461518_27461758_27461837_27462700_27462794_27463096_27463182_27465410_27465519_27465745_27465883_27470927_27471030_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_108013.known	chr2	-	5395	48	FSM	ENSG00000138002.16	ENST00000260570.8	5395	48	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_33	12.5403468364207	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACCACTGTATTCTTT	25	True	NA	-13	True	ATTAAA	-14	NA	27489743	27444376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27444522_27445013_27445106_27445295_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997_27450097_27453383_27453514_27453629_27453740_27453981_27454163_27454353_27454419_27454566_27454661_27456510_27456654_27457638_27457756_27457840_27457977_27458125_27458224_27458778_27458869_27459377_27459523_27459708_27459830_27461014_27461094_27461268_27461518_27461758_27461837_27462700_27462794_27463096_27463182_27465410_27465519_27465745_27465883_27470927_27471096_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_108018.known	chr2	-	2207	15	FSM	ENSG00000138002.16	ENST00000359466.10	2207	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	5.46230122694433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTCTCTTACTATTC	-5	True	NA	NA	False	NA	NA	NA	27489773	27471686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_10802.known	chr1	-	3254	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-3	True	NA	-10	True	ATTAAA	-16	NA	85259662	85249952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85252703_85258523_85258723_85259357
transcript_108020.known	chr2	+	872	7	FSM	ENSG00000157992.12	ENST00000288873.7	872	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_6	134.195131556004	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	-12	True	NA	20	True	AATAAA	-21	NA	27442380	27444297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_108021.nic	chr2	+	900	7	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_6	149.323753412956	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	144	False	NA	18	True	AATAAA	-19	NA	27442347	27444295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_108022.known	chr2	+	956	7	FSM	ENSG00000157992.12	ENST00000543753.5	956	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	189.885052948707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTGGGTCTTAGTTT	-27	True	NA	14	True	ATTAAA	-18	NA	27442365	27446481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27446300
transcript_108025.nic	chr2	+	1023	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-33	6	-18	0	intron_retention	FALSE	canonical	3	286	junction_1	108.706209574246	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	144	False	NA	14	True	AATAAA	-15	NA	27442347	27444291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_108030.nic	chr2	+	983	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-18	0	intron_retention	FALSE	canonical	3	197	junction_5	145.94163216848	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	144	False	NA	20	True	AATAAA	-21	NA	27442347	27444297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442441_27442578_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_108031.nic	chr2	+	978	6	NIC	ENSG00000157992.12	novel	665	6	NA	NA	-18	0	intron_retention	FALSE	canonical	3	140	junction_5	163.059988961118	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	144	False	NA	18	True	AATAAA	-19	NA	27442347	27444295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442441_27442578_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_108034.nic	chr2	+	713	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	199.645085088514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	151	False	NA	20	True	AATAAA	-21	NA	27442354	27444297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_108035.known	chr2	+	665	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	210.084364006463	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	5	True	NA	18	True	AATAAA	-19	NA	27442397	27444295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_108039.nic	chr2	+	1008	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	197	junction_5	136.181643403213	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	-10	True	NA	20	True	AATAAA	-21	NA	27442382	27444297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_108040.known	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	155.519002054411	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	2	True	NA	20	True	AATAAA	-21	NA	27442445	27444297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_108052.nic	chr2	+	1075	5	ISM	ENSG00000157992.12	ENST00000407293.5	942	6	-12	6	-12	0	intron_retention	FALSE	canonical	3	363	junction_1	86.1259978171516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	-10	True	NA	14	True	AATAAA	-15	NA	27442433	27444291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_108067.known	chr2	-	1612	7	FSM	ENSG00000115226.10	ENST00000264703.4	1612	7	0	0	0	0	multi-exon	TRUE	canonical	3	217	junction_1	25.0715642378638	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTGTATAGTATGCTG	22	True	NA	-4	True	AATAAA	-20	NA	27495200	27491882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27492479_27492665_27492791_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
transcript_108070.nic	chr2	-	1575	6	NIC	ENSG00000115226.10	novel	1612	7	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	91.6829318902924	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGGACAAACTGGAGC	NA	False	NA	-22	True	AATAAA	-2	NA	27495306	27491900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27492479_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
transcript_108071.known	chr2	-	1647	5	FSM	ENSG00000115226.10	ENST00000491414.5	1647	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	101.964454590803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGGACAAACTGGAGC	110	False	NA	-22	True	AATAAA	-2	NA	27495162	27491900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27492479_27493388_27493479_27493929_27494467_27494546_27494704_27494877
transcript_108075.known	chr2	+	2189	19	FSM	ENSG00000084734.9	ENST00000264717.7	2189	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.14530711822713	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACCTTTCAAAGTCAGT	-5	True	NA	NA	False	AATAAA	-23	NA	27496838	27523684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27496965_27497243_27497400_27497561_27497631_27498254_27498324_27498723_27498798_27499141_27499209_27499396_27499451_27501134_27501230_27503513_27503620_27505717_27505837_27506480_27506580_27506787_27506886_27507234_27507312_27507680_27507778_27507976_27508075_27508167_27508252_27518787_27518938_27522459_27522595_27523268
transcript_108081.known	chr2	+	3531	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	54.4706641637301	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGGTTCATGAATTAT	-15	True	NA	143	True	AATAAA	-25	NA	27583041	27623217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_108084.known	chr2	+	2445	14	FSM	ENSG00000198522.14	ENST00000610189.2	2445	14	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_11	54.1552665897628	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTAATGTTCTATAC	9	True	NA	10	True	AATAAA	-20	NA	27629049	27651511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_108087.known	chr2	+	2544	14	FSM	ENSG00000163798.13	ENST00000618046.4	2544	14	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_11	36.0564974160991	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATATTTTATTTTATT	-10	True	NA	11	True	ATTAAA	-19	NA	27663888	27694972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247_27669388_27675531_27675693_27677294_27677365_27677737_27677925_27682247_27682360_27685036_27685278_27687933_27688021_27688699_27688768_27693684_27693755_27694633
transcript_108088.known	chr2	+	3543	13	FSM	ENSG00000243943.10	ENST00000556601.5	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	54.1515363483705	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	NA	False	NA	141	True	AATAAA	-23	NA	27582968	27623215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27583143_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_10809.known	chr1	-	776	3	FSM	ENSG00000142867.14	ENST00000620248.2	776	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	68	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTTTTAATTTTT	-8	True	NA	NA	False	NA	NA	NA	85276456	85267623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85267950_85270617_85270907_85276295
transcript_1081.known	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	33.1762967593833	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-19	True	NA	-12	True	AATGAA	-17	NA	1407293	1401908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
transcript_10810.known	chr1	-	2833	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	19	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGGTTTGTGGGTTTTTG	-78	True	NA	NA	False	AATAAA	-18	NA	85276632	85265775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85267983_85270617_85270907_85276295
transcript_108100.nic	chr2	+	1695	12	NIC	ENSG00000198522.14	novel	1832	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	193.191079991882	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTTCTAAGACTGCT	-15	True	NA	44	True	GATAAA	-15	NA	27629025	27650844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_108103.nic	chr2	+	2308	10	ISM	ENSG00000163798.13	ENST00000326019.10	2959	14	-44	9826	-44	7846	5prime_fragment	FALSE	canonical	3	201	junction_1	31.7245085768786	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAGCATGAAAAGAAAA	0	True	NA	40	True	AAGAAA	-2	NA	27663426	27685143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247_27669388_27675531_27675693_27677294_27677365_27677737_27677925_27682247_27682360_27685036
transcript_108107.known	chr2	-	4296	6	FSM	ENSG00000119760.16	ENST00000337768.10	4296	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	32.4012345443812	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTCTGATTCATTAAT	4	True	NA	NA	False	ATTAAA	-28	NA	27663614	27650808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661389_27662178_27662282_27663328
transcript_108109.known	chr2	-	2280	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	69.7091098781214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTTTTCATTTAACTT	-21	True	NA	-21	True	AATATA	-14	NA	27663639	27653062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
transcript_108115.nic	chr2	+	1138	5	ISM	ENSG00000163798.13	ENST00000618046.4	2544	14	-2	25658	-2	-6378	5prime_fragment	FALSE	canonical	3	201	junction_1	35.7517482090037	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGATCCAGTGCTC	-12	True	NA	NA	False	AAGAAA	-4	NA	27663886	27669314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247
transcript_108116.known	chr2	-	2869	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	17.6405073623181	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTGATTCATTTTT	-22	True	NA	-10	True	AATATA	-25	NA	27663640	27653051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
transcript_108117.known	chr2	-	4114	5	FSM	ENSG00000119760.16	ENST00000404798.6	4114	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	91.1794247623881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATTCTGATTCATT	-8	True	NA	NA	False	ATTAAA	-25	NA	27663840	27650811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27662178_27662282_27663328
transcript_108119.nic	chr2	+	1229	3	ISM	ENSG00000163798.13	ENST00000427424.1	906	7	-803	8306	193	-8306	5prime_fragment	FALSE	canonical	3	201	junction_1	26	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTATGTAAACAGATTC	-14	True	NA	NA	False	TATAAA	-38	NA	27663663	27667386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27664578_27665099_27665296_27667267
transcript_108122.known	chr2	-	2343	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTCCAATGTAACAC	-15	True	NA	0	True	AATAAA	-22	NA	27629012	27625637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27627918_27628949
transcript_108125.known	chr2	+	508	4	FSM	ENSG00000243147.8	ENST00000296102.8	508	4	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_3	522.099820170647	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	-19	True	NA	12	True	AATAAA	-14	NA	27771718	27779733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27771800_27772673_27772693_27774423_27774531_27779432
transcript_108126.known	chr2	+	587	4	FSM	ENSG00000243147.8	ENST00000476552.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	460.8198008863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATAGCCCTTAAT	202	False	NA	-24	True	NA	NA	NA	27772189	27779697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27772386_27772673_27772693_27774423_27774531_27779432
transcript_108127.known	chr2	+	404	3	FSM	ENSG00000243147.8	ENST00000379666.7	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_2	412.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTATTGTGTCTTAG	-21	True	NA	13	True	AATAAA	-15	NA	27771716	27779734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27771800_27772673_27772693_27779432
transcript_108129.known	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	630	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	-13	True	NA	10	True	AATAAA	-12	NA	27771974	27779731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27772386_27772673_27772693_27779432
transcript_10813.known	chr1	-	3939	6	FSM	ENSG00000153904.21	ENST00000284031.13	3939	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	13.8938835463667	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAGTGTATGTCTCTTT	2	True	NA	-5	True	AATAAA	-20	NA	85465159	85318484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85321569_85324739_85324884_85350414_85350535_85351505_85351580_85358747_85358848_85464742
transcript_108130.known	chr2	-	1247	8	FSM	ENSG00000171174.15	ENST00000302188.8	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	3.92272291935599	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTAACCTCAATTGTC	-13	True	NA	84	True	ATTAAA	-33	NA	27890387	27781378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27781789_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_108136.known	chr2	+	1681	13	FSM	ENSG00000158019.21	ENST00000342045.6	1681	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	92.9627688318764	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	25	True	NA	21	True	ATTAAA	-27	NA	27890791	28338901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_108138.known	chr2	+	1686	13	FSM	ENSG00000158019.21	ENST00000361704.6	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	89.6222008705928	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	26	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_108139.known	chr2	+	1852	13	FSM	ENSG00000158019.21	ENST00000344773.6	1852	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	94.615743345856	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-38	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28327273_28327448_28338449
transcript_108141.known	chr2	+	1678	12	FSM	ENSG00000158019.21	ENST00000379624.6	1678	12	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	26.2860928569833	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-38	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_108146.known	chr2	+	6713	4	FSM	ENSG00000075426.12	ENST00000264716.9	6713	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.29983164553722	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGTTGGTTTATTCT	0	True	NA	11	True	AATAAA	-22	NA	28392857	28417317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28393823_28404106_28404359_28408758_28408867_28411929
transcript_108147.known	chr2	+	4771	9	FSM	ENSG00000213639.10	ENST00000358506.6	4771	9	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	181.855325396316	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	3	True	NA	11	True	ATTAAA	-11	NA	28751747	28802930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_108151.known	chr2	+	3527	9	FSM	ENSG00000213639.10	ENST00000296122.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	251.423323301558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGATTCTGTAATTCC	-19	True	NA	16	True	AATAAA	-21	NA	28751813	28801648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28751925_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_108152.known	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_6	69.9979591539231	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	-3	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_108160.known	chr2	-	1844	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	39.8148492678576	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-18	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_108162.nic	chr2	-	1820	7	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	82.9466026362074	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-21	True	NA	NA	False	AATAAA	-20	NA	28870312	28849820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_28850243_28850327_28850406_28851098_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_10817.known	chr1	+	2278	5	FSM	ENSG00000142871.18	ENST00000451137.7	2278	5	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	43.3495963072322	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGATTTAAGAAAACAG	0	True	NA	5	True	AATAAA	-16	NA	85580760	85583950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_85581048_85581364_85581579_85581927_85582285_85582415_85582625_85582739
transcript_108172.nnic	chr2	+	2234	5	NNC	ENSG00000213639.10	novel	4771	9	NA	NA	0	-611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	331.751036170198	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	0	True	NA	21	True	AGTAAA	-15	NA	28751675	28801037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_28751821_28752037_28752177_28781803_28781843_28783906_28783979_28799198
transcript_10818.known	chr1	+	1957	4	FSM	ENSG00000142871.18	ENST00000676007.1	1957	4	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	48.5546656414763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGATTTTATTTATGGA	139	False	NA	-38	True	NA	NA	NA	85580899	85583653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_85581048_85581364_85581579_85581927_85582285_85582415
transcript_108180.nnic	chr2	+	2310	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	3	-611	intron_retention	FALSE	canonical	0	0	junction_1	377.857115852011	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	-16	True	NA	21	True	AGTAAA	-15	NA	28751816	28801037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_108185.known	chr2	-	426	1	FSM	ENSG00000273233.1	ENST00000609581.1	426	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGATCCCATCCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	28810706	28810280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_28810300_28810700
transcript_108189.known	chr2	+	3506	18	FSM	ENSG00000163811.12	ENST00000407426.8	3506	18	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_7	54.0044211954032	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTGTGGTATAT	-13	True	NA	18	True	AATAAA	-17	NA	28894666	28948219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520_28935608_28936921_28936954_28937930_28937995_28941460_28941575_28942311_28942382_28946449_28946500_28946599
transcript_108194.nic	chr2	+	1392	11	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-4	18590	-4	3144	5prime_fragment	FALSE	canonical	3	453	junction_7	52.4724689718332	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGACCTCCAGAC	-17	True	NA	NA	False	NA	NA	NA	28894662	28929629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578
transcript_108200.nic	chr2	+	303	2	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-24	46211	-24	-96	5prime_fragment	FALSE	canonical	3	623	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCAGAAGCTGTAGGA	25	False	NA	NA	False	AAAACA	-43	NA	28894642	28902008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_28894924_28901986
transcript_108211.known	chr2	+	2560	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	159.690912390154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	NA	False	NA	22	True	AATAAA	-18	NA	30146940	30160533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
transcript_108213.known	chr2	+	787	5	FSM	ENSG00000119801.13	ENST00000492439.1	787	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	168.923799388955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAGCGATATAAGGAAGG	95	False	NA	NA	False	NA	NA	NA	30147956	30158747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30148092_30148244_30148542_30155849_30155911_30156627_30156793_30158618
transcript_108214.known	chr2	+	2197	4	FSM	ENSG00000119801.13	ENST00000402003.7	2197	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	174.25460299994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	3	True	NA	22	True	AATAAA	-18	NA	30147006	30160533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30148244_30148306_30156627_30156793_30158618
transcript_108217.known	chr2	+	2499	4	FSM	ENSG00000119801.13	ENST00000379519.7	2499	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	160.787644633121	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	NA	False	NA	22	True	AATAAA	-18	NA	30146940	30160533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30148244_30148542_30156627_30156793_30158618
transcript_10822.known	chr1	+	2446	4	FSM	ENSG00000142871.18	ENST00000674743.1	2446	4	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	16.7597401199687	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGATTCTGAAGCTAAA	161	False	NA	-15	True	TTTAAA	-36	NA	85580921	85583930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_85581048_85581364_85582285_85582415_85582625_85582739
transcript_108220.nnic	chr2	+	2261	4	NIC	ENSG00000119801.13	novel	2560	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	179.027620463684	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	-19	True	NA	22	True	AATAAA	-18	NA	30146942	30160533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_30147063_30155849_30155911_30156627_30156793_30158618
transcript_108222.known	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	43.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	3	True	NA	22	True	AATAAA	-18	NA	30147006	30160533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30156627_30156793_30158618
transcript_108224.known	chr2	+	653	3	FSM	ENSG00000119801.13	ENST00000470120.5	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	197.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGATGGAACCTTTCT	90	False	NA	NA	False	AATGAA	-24	NA	30147951	30158966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30148092_30156627_30156793_30158618
transcript_108226.known	chr2	+	559	3	FSM	ENSG00000213626.13	ENST00000406087.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	114.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCCTGAACTGTGT	3	True	NA	NA	False	AATAAA	-45	NA	30231536	30257656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30231765_30234404_30234512_30257432
transcript_108227.known	chr2	+	485	3	FSM	ENSG00000213626.13	ENST00000401506.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	133.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGTTGGTTTTCTTTTC	-17	True	NA	NA	False	NA	NA	NA	30232152	30257760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30232207_30234404_30234508_30257432
transcript_108228.known	chr2	+	1689	3	FSM	ENSG00000213626.13	ENST00000467242.1	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	129	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAATACATGTTT	-13	True	NA	NA	False	AAGAAA	-14	NA	30232156	30258040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30233135_30234404_30234508_30257432
transcript_108229.known	chr2	+	756	3	FSM	ENSG00000213626.13	ENST00000407930.2	756	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	131.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTTTCCCATCATGA	10	True	NA	NA	False	NA	NA	NA	30232179	30257670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30232595_30234404_30234508_30257432
transcript_108230.nic	chr2	+	1542	2	ISM	ENSG00000213626.13	ENST00000464412.5	494	3	-13	20996	-10	-20996	5prime_fragment	FALSE	canonical	3	231	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATAGAAAGCCAGGGAG	646	False	NA	NA	False	ATTAAA	-13	NA	30231523	30235705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_30231765_30234404
transcript_108233.known	chr2	+	4879	6	FSM	ENSG00000172954.14	ENST00000379509.8	4879	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	14.2211110677049	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	10	True	NA	NA	False	AATAAA	-21	NA	30447245	30644225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
transcript_108241.known	chr2	-	2683	23	FSM	ENSG00000162949.16	ENST00000295055.12	2683	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	5.43709329247479	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTCATTCATATTCTG	-15	True	NA	-12	True	AATAAA	-17	NA	30807446	30722770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_30723237_30730729_30730787_30731343_30731400_30732437_30732567_30734448_30734525_30736502_30736572_30738234_30738294_30738399_30738458_30741907_30741965_30742325_30742360_30743382_30743580_30745722_30745735_30751102_30751252_30753052_30753199_30754289_30754365_30758045_30758138_30763081_30763157_30764131_30764307_30770312_30770450_30775929_30776046_30777566_30777640_30787127_30787358_30807301
transcript_108244.known	chr2	-	2447	15	FSM	ENSG00000158089.15	ENST00000349752.10	2447	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	7.56097661330458	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	16	True	NA	-1	True	AATAAA	-26	NA	31138440	30910466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
transcript_108248.known	chr2	+	4825	6	FSM	ENSG00000013016.16	ENST00000322054.10	4825	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	5.2687759489278	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGAGGAGGGGCACACA	-4	True	NA	27	True	AATAAA	-21	NA	31234151	31269451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_31234849_31244273_31244451_31249370_31249469_31260509_31260923_31261548_31261714_31266176
transcript_108252.nic	chr2	+	3181	5	ISM	ENSG00000013016.16	ENST00000322054.10	4825	6	-234	6341	-234	-6341	5prime_fragment	TRUE	canonical	3	103	junction_1	2.1650635094611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTCCAAGTATTTGG	NA	False	NA	NA	False	AAAAAG	-8	NA	31233917	31263110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_31234849_31244273_31244451_31249370_31249469_31260509_31260923_31261548
transcript_108256.known	chr2	-	1516	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	75.3384134635836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	4	True	NA	NA	False	AATAAA	-19	NA	32011008	31867822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
transcript_108258.known	chr2	-	4505	9	FSM	ENSG00000162959.14	ENST00000295065.9	4505	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	33.7814668124402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGCTTCTTTATTAT	455	False	NA	NA	False	TATAAA	-22	NA	32010557	31865059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_108261.known	chr2	-	1336	8	FSM	ENSG00000162959.14	ENST00000426310.6	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	81.5535381932429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGGTGGAAGCTT	637	False	NA	NA	False	NA	NA	NA	32010375	31867977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31943301_31943384_32010186
transcript_108278.known	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	832.50498830671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	52	False	NA	-10	True	AATAAA	-11	NA	32039754	32011885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_108281.known	chr2	-	523	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	799.450961598021	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAATTCATA	13	True	NA	-31	True	NA	NA	NA	32039793	32011906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_108285.known	chr2	-	631	5	FSM	ENSG00000162961.14	ENST00000295066.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	714.788561394207	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTGGATGTATAAGA	1	True	NA	-148	True	NA	NA	NA	32039805	32024101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039592
transcript_108286.known	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1437	junction_4	158.368241765829	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	1	True	NA	-12	True	AATAAA	-15	NA	32039805	32023904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_108291.known	chr2	+	5268	17	FSM	ENSG00000021574.13	ENST00000315285.9	5268	17	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	37.2136987546253	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTACTTTTTTAC	1	True	NA	22	True	AATAAA	-13	NA	32063555	32157637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32064247_32087491_32087579_32089521_32089606_32098795_32098892_32114637_32114826_32115701_32115836_32116118_32116213_32126947_32127023_32128407_32128480_32136562_32136639_32136876_32136969_32137108_32137189_32141903_32141947_32143335_32143416_32144936_32145008_32147217_32147259_32154373
transcript_108292.known	chr2	+	5117	16	FSM	ENSG00000021574.13	ENST00000646571.1	5117	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	58.186901924364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTACTTTTTTAC	7	True	NA	22	True	AATAAA	-13	NA	32063610	32157637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32064247_32087491_32087579_32089521_32089606_32114637_32114826_32115701_32115836_32116118_32116213_32126947_32127023_32128407_32128480_32136562_32136639_32136876_32136969_32137108_32137189_32141903_32141947_32143335_32143416_32144936_32145008_32147217_32147259_32154373
transcript_108293.known	chr2	-	712	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGTAGCACGTGTG	-10	True	NA	NA	False	ATTAAA	-16	NA	32165757	32165045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32165000_32165800
transcript_108296.known	chr2	+	5089	14	FSM	ENSG00000152683.14	ENST00000282587.9	5089	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	17.3832538609116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGGCATCCTTTTG	-1	True	NA	16	True	ATTAAA	-19	NA	32165863	32224379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_108301.known	chr2	+	4776	13	FSM	ENSG00000152683.14	ENST00000435660.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	36.1435217800738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTTTCTTTATTCAG	NA	False	NA	39	True	ATTAAA	-32	NA	32165840	32224112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32220212
transcript_108305.known	chr2	+	11955	6	FSM	ENSG00000119820.11	ENST00000238831.9	11955	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	31.7653899708472	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATTAATTTGTCTTTT	-16	True	NA	4	True	AATAAA	-16	NA	32277903	32316594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32278235_32290482_32290637_32292176_32292349_32298233_32298312_32301381_32301496_32305488
transcript_10831.known	chr1	-	6203	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_2	9.82187028027092	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTAACCCCTGACTT	-17	True	NA	NA	False	AATAAA	-20	NA	85708433	85649416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
transcript_108315.known	chr2	+	15703	74	FSM	ENSG00000115760.15	ENST00000421745.7	15687	74	5	-21	5	21	multi-exon	TRUE	canonical	3	10	junction_32	37.2043748701204	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGCCATGGTGTGAA	-1	True	NA	28	True	AATAAA	-38	NA	32357027	32618899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32435495_32435586_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453943_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471125_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32524887_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447_32611583_32617724
transcript_108318.known	chr2	+	2888	20	FSM	ENSG00000018699.13	ENST00000317907.9	2888	20	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_17	24.3927921782093	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	6	True	NA	10	True	AATAAA	-18	NA	32628049	32821051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_108319.nnic	chr2	+	2807	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_13	36.1067091334068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	-12	True	NA	10	True	AATAAA	-18	NA	32628031	32821051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_108326.known	chr2	+	6502	34	FSM	ENSG00000049323.16	ENST00000404816.7	6502	34	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	22.5942775368116	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCCCCTAACATTCAT	-1	True	NA	37	True	ATTAAA	-27	NA	32946952	33399509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33134792_33134961_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257283_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33342837_33342964_33347366_33347511_33360596_33360780_33361428_33361516_33363389_33363519_33364215_33364357_33365332_33365504_33389183_33389307_33397132_33397283_33398363
transcript_108339.known	chr2	-	2751	8	FSM	ENSG00000119812.20	ENST00000238823.13	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_3	73.7635494298491	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-9	True	NA	-17	True	AATAAA	-18	NA	33599299	33583659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
transcript_108343.nic	chr2	-	685	4	ISM	ENSG00000119812.20	ENST00000689713.1	2482	9	-37	4649	-37	-2721	5prime_fragment	FALSE	canonical	3	751	junction_1	54.0144013718152	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCTTTAGTACCAAA	NA	False	NA	NA	False	AATATA	-37	NA	33599384	33588334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_33588520_33592079_33592215_33595488_33595638_33599168
transcript_108344.nnic	chr2	-	768	2	Genic_Genomic	ENSG00000260025.1	novel	366	1	NA	NA	-508	0	multi-exon	FALSE	canonical	3	45	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTCTTTGTGATAAATC	163	False	NA	-3	True	AATAAA	-15	NA	36355622	36354748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr2_-_36354982_36355087
transcript_108347.known	chr2	-	2097	9	FSM	ENSG00000171055.15	ENST00000379245.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	25.8623157315813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-23	True	NA	-20	True	AATAAA	-19	NA	36598191	36552257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36560784_36560866_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_108348.known	chr2	-	1993	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	7.49149177264394	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	0	True	NA	-20	True	AATAAA	-19	NA	36598168	36552257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_10835.known	chr1	-	2155	16	FSM	ENSG00000122417.15	ENST00000370566.7	2155	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	24.406738595906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCTAAGTAGTAGAT	NA	False	NA	-11	True	AATAAA	-12	NA	86396340	86348737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_108357.known	chr2	-	14174	18	FSM	ENSG00000115808.12	ENST00000263918.9	14174	18	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_13	12.938502397521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGAATTGCATATTT	25	True	NA	NA	False	AATAAA	-21	NA	36966536	36837697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_36849626_36849713_36849801_36850999_36851108_36855211_36855353_36857855_36858024_36861131_36861254_36867813_36867862_36869553_36869730_36877890_36878028_36883931_36884076_36886715_36886827_36893897_36894034_36899522_36899659_36902583_36902752_36905539_36905619_36916077_36916152_36925104_36925209_36966229
transcript_108360.nic	chr2	-	1172	8	ISM	ENSG00000115808.12	ENST00000263918.9	14174	18	-86	49047	-86	-17042	5prime_fragment	FALSE	canonical	3	67	junction_3	13.871126964501	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAAAGGGGAAAAAGG	14	False	NA	-4	True	AATACA	-5	NA	36966622	36886744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_36886827_36893897_36894034_36899522_36899659_36902583_36902752_36905539_36905619_36916077_36916152_36925104_36925209_36966229
transcript_108362.known	chr2	-	6937	36	FSM	ENSG00000008869.12	ENST00000233099.6	6937	36	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_28	12.018013690341	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATGTTTAAATGTAAT	-26	True	NA	NA	False	ATTAAA	-20	NA	37084372	36980894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_36981795_36988645_36988860_36990647_36990800_37000585_37000814_37002305_37002573_37003541_37003687_37005631_37005760_37007049_37007305_37008610_37008849_37013840_37014021_37019808_37019878_37020654_37020837_37027922_37028175_37028680_37028921_37032628_37032774_37037854_37038025_37040328_37040519_37041132_37041293_37049652_37049844_37053501_37053608_37056439_37056616_37057316_37057481_37058450_37058561_37058887_37058988_37060580_37060734_37061938_37062051_37064739_37064991_37065754_37065911_37068680_37068931_37070229_37070388_37072109_37072282_37075484_37075635_37076910_37077020_37079119_37079332_37083288_37083437_37084268
transcript_108364.known	chr2	-	10103	17	FSM	ENSG00000055332.19	ENST00000681507.1	10103	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_16	26.7738649385926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	NA	False	NA	0	True	AATAAA	-20	NA	37157192	37099209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148940_37156907
transcript_108365.known	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_16	17.9964189146063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-14	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_108372.known	chr2	-	9835	16	FSM	ENSG00000055332.19	ENST00000679507.1	9835	16	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	33.2519005304793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	106	False	NA	0	True	AATAAA	-20	NA	37157007	37099209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37156907
transcript_108375.nic	chr2	-	1790	16	ISM	ENSG00000055332.19	ENST00000233057.9	9975	17	-4	8267	-4	-131	5prime_fragment	FALSE	canonical	3	88	junction_15	18.0542392682593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGCACTTGAAAATC	-18	True	NA	NA	False	GATAAA	-4	NA	37156984	37107476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_108377.known	chr2	+	3839	9	FSM	ENSG00000152133.16	ENST00000674370.2	3839	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	2.02715934252836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	-8	True	NA	44	True	AATAAA	-19	NA	37084517	37099244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_108378.known	chr2	+	3905	9	FSM	ENSG00000152133.16	ENST00000409774.6	3905	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	2.02715934252836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTAAACATTTAATTG	-2	True	NA	43	True	AATAAA	-18	NA	37084450	37099243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_108381.nic	chr2	-	502	4	ISM	ENSG00000055332.19	ENST00000411537.7	1272	12	-112	26927	0	-10185	5prime_fragment	FALSE	canonical	3	88	junction_3	30.5759527879163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAGCAAAAAATGCCG	-2	True	NA	NA	False	AATAGA	-37	NA	37157047	37146913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37146974_37147687_37147823_37148856_37149024_37156907
transcript_108385.known	chr2	-	3346	16	FSM	ENSG00000115816.15	ENST00000234170.10	3346	16	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_12	66.4989891318323	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGAAGCATTGTTA	353	False	37231614	-45	True	AATAAA	-31	NA	37231596	37201611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_10839.known	chr1	-	1422	11	FSM	ENSG00000122417.15	ENST00000488879.6	1422	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	24.9567626105631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACCAAAAATAAAAA	15	True	NA	NA	False	AGTAAA	-41	NA	86396286	86358816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86386914_86387087_86396032
transcript_108394.nic	chr2	-	2978	13	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-64	9386	-64	-9214	5prime_fragment	FALSE	canonical	3	1227	junction_9	69.8579908735492	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAATACATTTAATAT	289	False	NA	NA	False	NA	NA	NA	37231660	37210997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_108397.nic	chr2	-	2696	11	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-64	10723	-64	-10551	5prime_fragment	FALSE	canonical	3	1227	junction_7	69.6631897058985	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATACTTCTATCTTCT	289	False	NA	NA	False	NA	NA	NA	37231660	37212334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_108406.known	chr2	+	3152	5	FSM	ENSG00000218739.10	ENST00000402297.6	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	31.2439994238894	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	6	True	NA	22	True	AATAAA	-33	NA	37196495	37204743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862
transcript_108407.known	chr2	+	695	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	70.8003354511827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	18	False	NA	18	True	AATAAA	-29	NA	37196507	37204739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
transcript_108408.nic	chr2	-	2118	4	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-64	20808	-64	6188	5prime_fragment	FALSE	canonical	3	1228	junction_2	90.1936188922969	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGTTGCTTCCTGGGT	289	False	NA	NA	False	NA	NA	NA	37231660	37222419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37222564_37223169_37223402_37227543_37229037_37231411
transcript_108411.known	chr2	+	800	3	FSM	ENSG00000218739.10	ENST00000470216.1	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGAACAGCAAAAATTAG	4	True	NA	NA	False	AAAACA	-2	NA	37196493	37201704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37196521_37199703_37199820_37201047
transcript_108412.nic	chr2	-	473	2	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-64	27201	-64	-205	5prime_fragment	FALSE	canonical	3	1431	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGCAGAAAGTCAAAGGA	289	False	NA	NA	False	AATAAA	-10	NA	37231660	37228812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37229037_37231411
transcript_108416.known	chr2	-	6156	19	FSM	ENSG00000115825.11	ENST00000234179.8	6156	19	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_17	46.2805454687916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	0	True	NA	16	True	AATAAA	-31	NA	37324833	37250501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37324680
transcript_108418.nic	chr2	-	2775	18	NIC	ENSG00000115825.11	novel	6156	19	NA	NA	0	-2438	combination_of_known_junctions	FALSE	canonical	3	87	junction_17	61.0906071645799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTTTTGTATTTTTT	0	True	NA	-12	True	TATAAA	-19	NA	37324833	37252939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37324680
transcript_10842.known	chr1	-	1650	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTTCGAGCTACTT	-22	True	NA	NA	False	AATAAA	-29	NA	86396323	86385727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_86387087_86396032
transcript_108435.nic	chr2	+	2363	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-306	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_5	103.11805532172	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	37231324	37249160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_108437.known	chr2	+	2184	10	FSM	ENSG00000003509.16	ENST00000002125.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	71.6324638452651	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	-19	True	NA	NA	False	AATAAA	-25	NA	37231657	37249160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241792_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_10845.known	chr1	+	3004	14	FSM	ENSG00000016490.16	ENST00000394711.2	3004	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.737820234355803	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGCATAAAAACTATCC	-2	True	NA	NA	False	AATAAA	-19	NA	86468926	86500259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86469134_86473416_86473558_86473728_86473877_86476447_86476554_86482204_86482383_86485342_86485562_86486525_86486754_86488995_86489171_86491264_86491372_86493383_86493600_86494186_86494449_86495504_86495676_86498571_86498812_86499653
transcript_108454.nic	chr2	+	2295	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	307	junction_5	41.9702275428666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	-27	True	NA	6	True	AATAAA	-19	NA	37231649	37248420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_10846.known	chr1	+	6456	10	FSM	ENSG00000097033.14	ENST00000616170.4	6456	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	105.599873737298	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTGTGTTGCTAA	-9	True	NA	14	True	AATAAA	-8	NA	86704569	86748176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86728402_86728490_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_108465.nic	chr2	+	1494	4	ISM	ENSG00000003509.16	ENST00000455230.5	946	9	44	8654	-4	-2706	5prime_fragment	FALSE	canonical	3	402	junction_3	18.263503375737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTCACATTGGTAGTC	-2	True	NA	NA	False	AATACA	-33	NA	37231674	37238922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756
transcript_108469.known	chr2	+	1683	7	FSM	ENSG00000115828.17	ENST00000338415.8	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	5.46707315561891	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCTTTTTTAT	0	True	NA	NA	False	ATTAAA	-18	NA	37344629	37373322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37344852_37352788_37352936_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_108471.known	chr2	-	5096	2	FSM	ENSG00000163171.8	ENST00000295324.4	5096	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCATTTAATTATCT	0	True	NA	-12	True	AATGAA	-18	NA	37671642	37641943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37646823_37671425
transcript_108472.known	chr2	-	997	2	FSM	ENSG00000163171.8	ENST00000457889.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTAAGTCAGAGGAGT	6	True	NA	NA	False	NA	NA	NA	37672199	37645940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37646823_37672084
transcript_108477.known	chr2	+	1893	11	FSM	ENSG00000115841.21	ENST00000354545.8	1893	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	4.07553677446297	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTTCACTCGTGTCCA	7	True	NA	4	True	AATAAA	-31	NA	37925286	38017744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37925426_37929261_37929730_37974039_37974215_37975211_37975315_37981282_37981344_37989540_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185
transcript_108479.known	chr2	-	5218	3	FSM	ENSG00000138061.12	ENST00000610745.5	5218	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGTCCATTCTA	0	True	NA	89	True	ATTAAA	-16	NA	38076151	38067508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38071311_38074345_38075390_38075779
transcript_10848.known	chr1	+	6371	9	FSM	ENSG00000097033.14	ENST00000370558.8	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_5	29.2435890410189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGCTAAATCTCGTA	-3	True	NA	22	True	AATAAA	-16	NA	86704575	86748184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_108480.known	chr2	-	3805	13	FSM	ENSG00000119787.14	ENST00000378954.9	3805	13	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_1	59.3129061278684	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTAGACCATTGGCT	5	True	NA	NA	False	ATTAAA	-24	NA	38377273	38293953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_108483.known	chr2	-	2335	13	FSM	ENSG00000119787.14	ENST00000419554.6	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.93657464507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	5	True	NA	-5	True	AATAAA	-24	NA	38377273	38295900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38296591_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_108497.known	chr2	-	2779	14	FSM	ENSG00000143889.16	ENST00000358367.8	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	138.53788493452	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	5	True	NA	-2	True	ATTAAA	-18	NA	38603036	38563185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_108506.known	chr2	-	3035	13	FSM	ENSG00000143889.16	ENST00000608859.5	3035	13	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_12	42.2501643652293	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	5	True	NA	-2	True	ATTAAA	-18	NA	38603036	38563185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437
transcript_108515.nnic	chr2	-	1821	13	NNC	ENSG00000143889.16	novel	3035	13	NA	NA	-11	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	172.629339594661	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAATGGTTGATCTCAT	356	False	38602955	-19	True	ATTAAA	-7	NA	38602940	38564109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602631
transcript_108516.known	chr2	-	1908	12	FSM	ENSG00000143889.16	ENST00000409328.5	1908	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	178.60848729984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTAAGCTTAAATAT	7	True	NA	-18	True	AATAAA	-21	NA	38602857	38564031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581981_38583840_38583927_38585643_38585882_38591529_38591649_38602437
transcript_108523.known	chr2	-	1687	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	264.603739370571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGCTGCATTGTTTA	-12	True	NA	-2	True	AATAAA	-16	NA	38602929	38581074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_108529.known	chr2	+	2277	7	FSM	ENSG00000143891.17	ENST00000272252.10	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	15.6035964515307	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTGTTCCTTTACTC	18	True	NA	8	True	AATAAA	-20	NA	38666113	38734765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555_38729698_38731734_38731910_38733487
transcript_10854.known	chr1	-	1542	5	FSM	ENSG00000183291.18	ENST00000331835.10	1542	5	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	91.5027321996453	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTGGTTCAAAGT	-2	True	NA	-5	True	ATTAAA	-21	NA	86914126	86862444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914027
transcript_108540.known	chr2	-	1944	9	FSM	ENSG00000115875.19	ENST00000425941.6	1944	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_6	941.666740412976	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAGTGTTAATTAGGAC	-4	True	NA	NA	False	NA	NA	NA	38751363	38744452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
transcript_108549.known	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	691.848337751114	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	1	True	NA	29	True	AATAAA	-16	NA	38751358	38744892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_108555.known	chr2	-	2453	7	FSM	ENSG00000115875.19	ENST00000446327.6	2453	7	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	663.387623406473	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACTTAATTTTTGG	NA	False	NA	NA	False	AATAAA	-23	NA	38751494	38743598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_108556.known	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	195.45218227371	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	7	True	NA	4	True	NA	NA	NA	38751352	38744917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
transcript_108575.known	chr2	+	3705	3	FSM	ENSG00000152147.11	ENST00000281950.8	3705	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	13.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATTTTTTGTCTCCT	-6	True	NA	16	True	AATAAA	-19	NA	38778209	38785002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38778282_38778971_38779119_38781516
transcript_108579.known	chr2	-	4885	24	FSM	ENSG00000163214.21	ENST00000457308.6	4885	24	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_15	15.2476717364896	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	-27	True	NA	-5	True	ATTAAA	-17	NA	38875934	38797728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38798443_38802714_38802916_38806558_38806694_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053_38854179_38855056_38855253_38856339_38856462_38858660_38858837_38860998_38861838_38862144_38862334_38863360_38863520_38868181_38868412_38875786
transcript_108585.known	chr2	+	706	5	FSM	ENSG00000188010.16	ENST00000644631.4	727	5	21	0	6	0	multi-exon	FALSE	canonical	3	179	junction_4	21.242645786248	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTCTGCTTATTATAAT	-7	True	NA	19	True	AATAAA	-14	NA	38875996	38882709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38876111_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_108588.known	chr2	-	1056	1	FSM	ENSG00000269210.2	ENST00000601251.2	1056	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCTATATAATTAATCT	8	True	NA	3	True	AATAAA	-30	NA	38960342	38959286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38959300_38960300
transcript_108589.known	chr2	+	648	5	FSM	ENSG00000188010.16	ENST00000409665.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	83.7447759564738	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	7	True	NA	4	True	AATAAA	-16	NA	38876010	38882647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38876111_38880178_38880230_38880581_38880707_38881441_38881579_38882412
transcript_10859.known	chr1	+	6759	7	FSM	ENSG00000153936.18	ENST00000370550.10	6759	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	22.1108319357027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATGACTGTACTTT	-70	True	NA	12	True	TATAAA	-3	NA	86914634	87109982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837_87097936_87103431_87103590_87104469
transcript_108590.known	chr2	+	750	5	FSM	ENSG00000188010.16	ENST00000410014.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.658332954511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAACTTTATA	-13	True	NA	3	True	AATAAA	-15	NA	38875990	38882646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38876212_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_108592.known	chr2	-	4335	34	FSM	ENSG00000011566.15	ENST00000263881.8	4335	34	0	0	0	0	multi-exon	TRUE	canonical	3	191	junction_19	36.8486592898582	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCATCTGGTTTAATC	-3	True	NA	1	True	AATAAA	-30	NA	39437285	39249265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_108597.known	chr2	-	4271	33	FSM	ENSG00000011566.15	ENST00000341681.9	4271	33	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_19	44.378653018653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGTTGTATAGTAGCT	-19	False	NA	-16	True	AATAAA	-13	NA	39437301	39249282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_1086.known	chr1	+	1748	3	FSM	ENSG00000224870.8	ENST00000448629.7	1759	3	1	10	1	0	multi-exon	FALSE	canonical	3	71	junction_1	44.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAATTACTCTGTCTCT	-4	True	NA	9	True	TATAAA	-10	NA	1399519	1402036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1399690_1400157_1400304_1400604
transcript_108600.nic	chr2	-	1896	21	ISM	ENSG00000011566.15	ENST00000263881.8	4335	34	-20	37595	-4	1354	5prime_fragment	FALSE	canonical	3	191	junction_6	39.0357208208072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTACCAGTAGGTATTGA	NA	False	NA	NA	False	AAGAAA	-11	NA	39437305	39286860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_108605.known	chr2	-	407	3	FSM	ENSG00000011566.15	ENST00000484274.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAGTTTTTCTTCA	217	False	NA	NA	False	AATAAA	-17	NA	39437065	39356164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39356340_39378065_39378124_39436891
transcript_108607.known	chr2	+	2536	7	FSM	ENSG00000231312.8	ENST00000449569.6	2536	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	24.4653950623233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAACCCCGTCTCTAC	4	True	NA	NA	False	NA	NA	NA	39437432	39601315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39557981_39558047_39599365
transcript_108608.known	chr2	+	3990	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	19.5897932607774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-8	True	AATAAA	-8	NA	39437226	39602628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
transcript_108611.known	chr2	+	1086	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	5	0	1	0	multi-exon	FALSE	canonical	3	28	junction_3	17.5182444579612	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAGCTCACACCTG	-4	True	NA	NA	False	TTTAAA	-20	NA	39437424	39475339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
transcript_108616.known	chr2	+	1664	4	FSM	ENSG00000152154.11	ENST00000281961.3	1664	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	13.2245562832516	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	-24	True	NA	19	True	ATTAAA	-19	NA	39665916	39717963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39666375_39704080_39704195_39707048_39707187_39717009
transcript_108617.nic	chr2	+	1683	3	NIC	ENSG00000152154.11	novel	1664	4	NA	NA	-157	0	intron_retention	FALSE	canonical	3	37	junction_2	15	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	276	False	NA	19	True	ATTAAA	-19	NA	39665759	39717963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_39666375_39704080_39704195_39717009
transcript_108619.known	chr2	-	2089	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	61.4748729156881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-18	True	NA	-2	True	ATTAAA	-19	NA	39779267	39736306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_108621.known	chr2	-	2205	10	FSM	ENSG00000138050.15	ENST00000505747.6	2205	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_8	20.4613456709637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCTGGTTTAATGT	-9	True	NA	NA	False	AAAAAG	-22	NA	39779258	39736060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_108624.nic	chr2	-	554	3	ISM	ENSG00000138050.15	ENST00000403537.3	961	4	-43	968	-15	146	5prime_fragment	FALSE	canonical	3	155	junction_1	35	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGAGCAAAGAGATTTT	NA	False	NA	NA	False	AATAAA	-9	NA	39779282	39769870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_39770120_39771504_39771641_39779113
transcript_108625.nic	chr2	-	488	3	ISM	ENSG00000138050.15	ENST00000403537.3	961	4	-43	1034	-15	80	5prime_fragment	FALSE	canonical	3	155	junction_1	35	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAACAAATGCAAAAGATA	NA	False	NA	NA	False	ATTAAA	-3	NA	39779282	39769936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_39770120_39771504_39771641_39779113
transcript_108626.nic	chr2	-	415	3	ISM	ENSG00000138050.15	ENST00000403537.3	961	4	-43	1107	-15	7	5prime_fragment	FALSE	canonical	3	155	junction_1	35	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTCAGAGAGATGATAA	NA	False	NA	NA	False	AAAAAG	-7	NA	39779282	39770009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_39770120_39771504_39771641_39779113
transcript_108627.nnic	chr2	+	2066	8	NNC	ENSG00000162878.13	novel	1550	8	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.957806333006	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	NA	False	NA	31	True	AATAAA	-37	NA	42047986	42058517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_42048082_42048539_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
transcript_108628.nnic	chr2	+	2043	8	NNC	ENSG00000162878.13	novel	1550	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.957806333006	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	-5	True	NA	31	True	AATAAA	-37	NA	42048017	42058517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_42048090_42048539_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
transcript_108634.known	chr2	+	2490	7	FSM	ENSG00000162878.13	ENST00000294964.6	2490	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_2	25.1263473933903	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	-2	True	NA	31	True	AATAAA	-37	NA	42048020	42058517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
transcript_108637.known	chr2	+	5546	23	FSM	ENSG00000143924.19	ENST00000318522.10	5546	23	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	101.462772556618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTTAACTCTTTCTT	-25	True	NA	31	True	AATAAA	-27	NA	42169352	42332548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120_42261295_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_108642.known	chr2	+	3568	22	FSM	ENSG00000143924.19	ENST00000402711.6	3568	22	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	127.280182659985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCCTTCTTTAAAA	-25	True	NA	22	True	AAGAAA	-24	NA	42169352	42330744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_108648.known	chr2	+	962	4	FSM	ENSG00000143924.19	ENST00000409040.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	146.876365241882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTTATAAACAATCT	3	True	NA	NA	False	NA	NA	NA	42169380	42261513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120
transcript_108651.nic	chr2	+	633	3	ISM	ENSG00000143924.19	ENST00000409040.1	962	4	-64	4883	-36	-4883	5prime_fragment	FALSE	canonical	3	679	junction_1	66.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCATTTATGAAAGGGG	8	False	NA	NA	False	AAGAAA	-23	NA	42169316	42256630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_42169637_42245504_42245688_42256500
transcript_108655.known	chr2	-	895	3	FSM	ENSG00000115944.15	ENST00000464443.5	895	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	846.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATGGAAAGAACACAGAAG	-12	True	NA	NA	False	NA	NA	NA	42361192	42350851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42351360_42353211_42353344_42360937
transcript_108656.known	chr2	-	2282	3	FSM	ENSG00000115944.15	ENST00000234301.3	2282	3	0	0	0	0	multi-exon	FALSE	canonical	3	1696	junction_1	52	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTCTCTCAGTGTCAT	-5	True	NA	NA	False	TATAAA	-30	NA	42361217	42349337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42351360_42353211_42353344_42361089
transcript_108657.known	chr2	-	3656	2	FSM	ENSG00000171126.8	ENST00000394973.4	3656	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATAACCATCAATTTTA	3	True	NA	-25	True	AATAAA	-3	NA	42493977	42442031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42444580_42492869
transcript_108659.known	chr2	-	3709	2	FSM	ENSG00000171126.8	ENST00000306078.2	3709	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGGTACTGGGACCG	-2	True	NA	-10	True	AATAAA	-18	NA	42493982	42442016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42444580_42492836
transcript_10866.known	chr1	+	1585	5	FSM	ENSG00000153936.18	ENST00000370551.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	8.16624148553054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGAGTTTTCAGTTTT	-57	True	NA	23	True	AATAAA	-33	NA	86914647	87098445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837
transcript_108682.known	chr2	+	2202	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_11	290.676664142347	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	-7	True	NA	19	True	AATAAA	-20	NA	42568516	42709544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
transcript_108683.known	chr2	+	1702	14	FSM	ENSG00000057935.14	ENST00000454356.5	1702	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	455.127474177817	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	30	True	NA	27	True	AATAAA	-19	NA	42568674	42709213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707910_42708055_42708873
transcript_108684.known	chr2	+	5446	17	FSM	ENSG00000057935.14	ENST00000405094.2	5446	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	618.127259222363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	-13	True	NA	15	True	AATAAA	-15	NA	42568631	42756946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
transcript_108685.known	chr2	-	1256	10	FSM	ENSG00000162882.15	ENST00000294973.11	1256	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	10.361371757222	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	-5	True	NA	-2	True	AATAAA	-19	NA	42792583	42767088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712_42769859_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_10869.known	chr1	+	4993	5	FSM	ENSG00000143013.13	ENST00000370544.10	4993	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	17.4266319178434	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTGTTATAAGTTCT	-2	True	NA	10	True	AATAAA	-19	NA	87328879	87348923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_87329245_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_108692.known	chr2	-	908	4	FSM	ENSG00000162882.15	ENST00000402268.1	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCTTCCAGGTCACA	11	True	NA	NA	False	NA	NA	NA	42792567	42782786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42783421_42783783_42783868_42788528_42788608_42792456
transcript_1087.known	chr1	+	1843	3	FSM	ENSG00000224870.8	ENST00000447725.2	1843	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGATAAACAAAAGTATAA	8	True	NA	-21	True	NA	NA	NA	1399571	1402006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1399690_1399980_1400304_1400604
transcript_108702.known	chr2	-	3693	2	FSM	ENSG00000152518.8	ENST00000282388.4	3693	2	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATGTAAGAGCTTTCT	-3	True	NA	-9	True	AATAAA	-21	NA	43226606	43222401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43225753_43226264
transcript_108705.known	chr2	-	6091	38	FSM	ENSG00000115970.19	ENST00000405975.7	6091	38	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_18	12.7501127911481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	-13	True	NA	-15	True	CATAAA	-19	NA	43596038	43230850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_108711.known	chr2	-	3043	17	FSM	ENSG00000115970.19	ENST00000404790.5	3043	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_16	11.6241599158821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCTTTCTCCACCAAA	2	True	NA	NA	False	AATAAA	-19	NA	43596023	43556092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_108712.known	chr2	-	6310	38	FSM	ENSG00000115970.19	ENST00000405006.8	6310	38	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_37	17.9880651935756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGCCTCCCCTACTTC	51	False	NA	-16	True	CATAAA	-18	NA	43595974	43230851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595646
transcript_108714.known	chr2	+	6994	30	FSM	ENSG00000152527.14	ENST00000282406.9	6994	30	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_10	11.1022702309311	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	-31	True	NA	9	True	AATAAA	-17	NA	43637259	43767987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_43637380_43644670_43644797_43678862_43678926_43692513_43692664_43694430_43694515_43695142_43695225_43697170_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43710576_43712224_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
transcript_108717.known	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	27.976552682559	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	19	True	NA	12	True	AATAAA	-13	NA	43774081	43809997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_108718.known	chr2	+	1399	13	FSM	ENSG00000138036.18	ENST00000260605.12	1399	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	20.6033977780365	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTAAGTGGTATATAC	-24	True	NA	25	True	AATAAA	-26	NA	43774038	43810010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_10872.known	chr1	+	1260	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	75.0345753636282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATTTGGAAAAAA	206	False	NA	65	True	AAAAAG	-11	NA	87331667	87345408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_108722.known	chr2	+	1133	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	11.689311356962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCAGCATTTTATAT	-14	True	NA	NA	False	AATAAA	-18	NA	43774048	43795179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
transcript_108728.known	chr2	-	5142	38	FSM	ENSG00000138095.20	ENST00000684619.1	5142	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	278.51823566292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTATATTGAATCTCAT	NA	False	NA	-19	True	AATAAA	-5	NA	43996036	43887756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995773
transcript_108729.known	chr2	-	4325	38	FSM	ENSG00000138095.20	ENST00000682480.1	4325	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	278.043895089941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTATGTACTTATG	-6	True	NA	-32	True	AATAAA	-6	NA	43995979	43888509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918152_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_108737.known	chr2	-	2789	24	FSM	ENSG00000138095.20	ENST00000447246.2	2789	24	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	243.207186056902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGAATACATGCATGC	10	False	43996004	NA	False	AATAAA	-29	NA	43995994	43942565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43942804_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_108739.known	chr2	-	5071	38	FSM	ENSG00000138095.20	ENST00000683213.1	5071	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	279.422507881673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAAGTGATCCCTAT	5	True	NA	-31	True	NA	NA	NA	43995999	43887768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974610_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_108740.known	chr2	-	2663	24	FSM	ENSG00000138095.20	ENST00000409659.6	2663	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	248.001562590357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTTTTCCCCAAATTT	15	False	43996004	-28	True	AATAAA	-19	NA	43995989	43942698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43942816_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_108741.known	chr2	-	1875	14	FSM	ENSG00000138095.20	ENST00000409946.6	1875	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	326.859885295496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAGAATACTATTTTG	-1	True	NA	NA	False	AATAAA	-13	NA	43996005	43958985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43959221_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_108752.known	chr2	+	2608	6	FSM	ENSG00000138032.21	ENST00000282412.9	2608	6	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_5	157.618019274447	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	-16	True	NA	NA	False	AATAAA	-23	NA	44168874	44231472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_108753.known	chr2	+	3877	6	FSM	ENSG00000138032.21	ENST00000378551.6	3877	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	239.276074859147	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGCCTGGCTATTCT	-14	True	NA	NA	False	AGTAAA	-35	NA	44168876	44234646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44232315
transcript_108756.known	chr2	+	1713	5	FSM	ENSG00000138032.21	ENST00000345249.8	1713	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	388.87039936205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	19	True	NA	NA	False	AATAAA	-23	NA	44168909	44231472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_108757.known	chr2	+	1481	3	FSM	ENSG00000138032.21	ENST00000409486.6	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTTAGAGA	-14	True	NA	NA	False	NA	NA	NA	44168876	44209432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44201185_44202046_44209209
transcript_108759.known	chr2	-	3080	15	FSM	ENSG00000138078.16	ENST00000410081.5	3080	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	58.6938181217944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTAAAGTTTTTGAATA	-19	True	NA	-124	True	GATAAA	-17	NA	44361806	44320921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361379
transcript_108762.known	chr2	-	3030	15	FSM	ENSG00000138078.16	ENST00000409272.5	3030	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	65.8856848593665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACTTTTAAACATTTT	-18	True	NA	-29	True	AATAAA	-23	NA	44361805	44320826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361523
transcript_108763.known	chr2	-	5212	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	64.0376164963267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTGTAATTTTATTT	-1	True	NA	-10	True	ATTAAA	-13	NA	44361494	44318765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
transcript_108764.known	chr2	-	5829	14	FSM	ENSG00000138078.16	ENST00000409411.6	5829	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	47.1748604197331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-1	True	NA	NA	False	ATTAAA	-19	NA	44361494	44317606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
transcript_108765.known	chr2	-	4703	14	FSM	ENSG00000138078.16	ENST00000409957.5	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	55.3114901873522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	0	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361416
transcript_108766.known	chr2	-	6049	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	52.2456645804762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTCTCAATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	44361862	44317610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
transcript_10878.known	chr1	+	6070	22	FSM	ENSG00000065243.20	ENST00000370521.8	6070	22	0	0	0	0	multi-exon	FALSE	canonical	2	103	junction_12	19.0313025353095	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAGTAATCTTACTTA	1	True	NA	NA	False	AATAAA	-15	NA	88684272	88836255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
transcript_108781.nic	chr2	+	1296	9	NIC	ENSG00000143919.15	novel	594	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	65.9117544524495	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	-3	True	NA	25	True	AATAAA	-29	NA	44676554	44772592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_44676776_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_108786.known	chr2	+	665	4	FSM	ENSG00000143919.15	ENST00000402247.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	114.386285114179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCTAGAACAAAGACATAG	-4	True	NA	NA	False	NA	NA	NA	44361949	44549785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554
transcript_108788.known	chr2	+	1512	11	FSM	ENSG00000143919.15	ENST00000378494.8	1512	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	34.2549266529648	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	-7	True	NA	25	True	AATAAA	-29	NA	44361946	44772592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_108790.known	chr2	-	910	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCAGTATGGTTGGA	6991	False	NA	NA	False	NA	NA	NA	44935644	44923034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44923580_44935279
transcript_108791.known	chr2	-	2206	2	FSM	ENSG00000170577.8	ENST00000303077.7	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCGCGGGCCGGGAGTGC	-4	True	NA	4	True	AATAAA	-40	NA	45009452	45005181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_45006486_45008550
transcript_108792.known	chr2	-	3667	21	FSM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_20	15.011662133155	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	-10	True	NA	-6	True	AATAAA	-17	NA	45611267	45388679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45476992_45477076_45488239_45488332_45546731_45546840_45547521_45547613_45551124_45551283_45553622_45553731_45562652_45562757_45573206_45573343_45574626_45574724_45579874_45580014_45581692_45581811_45585607_45585775_45599448_45599836_45601902_45602084_45605361_45605442_45611218
transcript_1088.known	chr1	-	1693	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	39.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTTAGAGTCATTT	6	True	NA	-16	True	AATGAA	-13	NA	1407268	1401912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1402257_1405808_1407020_1407130
transcript_108802.known	chr2	+	5155	16	FSM	ENSG00000116016.14	ENST00000263734.5	5155	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.18133634311129	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCTGGTGGCTCTTAT	0	True	NA	24	True	ATTAAA	-15	NA	46297406	46386697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46297938_46346872_46347064_46356150_46356303_46356723_46356809_46360637_46360757_46360884_46361091_46369826_46369934_46375689_46375838_46376538_46376754_46377893_46378088_46378656_46378768_46380226_46380718_46381595_46381723_46381974_46382090_46382424_46382599_46384508
transcript_108804.known	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	141.106835018325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-6	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_108807.known	chr2	-	1294	6	FSM	ENSG00000151665.13	ENST00000281382.11	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_5	34.8114923552553	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTATCTGGGAGGGAG	4	True	NA	NA	False	NA	NA	NA	46617041	46580936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_108809.known	chr2	+	6323	5	FSM	ENSG00000119878.6	ENST00000238892.4	6323	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	23.6577154433813	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATCTTTTTCATATT	2	True	NA	NA	False	NA	NA	NA	46617214	46630176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46617299_46618772_46618839_46619626_46619682_46623763_46623868_46624162
transcript_108814.nnic	chr2	-	747	5	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_4	135.916104638119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	65	False	NA	NA	False	AATAAA	-15	NA	46617091	46581284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46616969
transcript_108815.known	chr2	+	4766	2	FSM	ENSG00000171150.9	ENST00000394861.3	4766	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCATCTGTATTTTGTT	17	True	NA	NA	False	AATACA	-20	NA	46699294	46763129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46699450_46758518
transcript_108819.known	chr2	+	3033	21	FSM	ENSG00000068724.17	ENST00000409245.5	3033	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	24.7678723349423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCTGCAGCCCTCGT	28	False	NA	1	True	AATACA	-16	NA	46916156	47074048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46916578_46917183_46917278_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_108823.known	chr2	+	4306	21	FSM	ENSG00000068724.17	ENST00000394850.6	4306	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	29.6426635105552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGATCTATTTTTTTTCT	42	False	NA	NA	False	TATAAA	-28	NA	46941285	47075324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47047265_47047338_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_108825.known	chr2	+	5095	20	FSM	ENSG00000068724.17	ENST00000319190.11	5095	20	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_12	12.684319719993	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGCTCATTTACACAGAA	-20	True	NA	18	True	ATTAAA	-15	NA	46941223	47076123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_108833.known	chr2	+	2418	19	FSM	ENSG00000068724.17	ENST00000441914.5	2418	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	23.1223930796186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGCTGCAGCCGCAGGGA	26	False	NA	NA	False	NA	NA	NA	46941542	47073923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_108845.known	chr2	-	3978	4	FSM	ENSG00000180398.13	ENST00000649435.1	3978	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	303.33589742506	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTATTCTTGTA	19	True	NA	-98	True	NA	NA	NA	46915761	46901966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905591_46907809_46907970_46909022_46909178_46915722
transcript_108850.known	chr2	-	3975	3	FSM	ENSG00000180398.13	ENST00000409913.5	3975	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	319.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	237	False	NA	-5	True	AATAAA	-16	NA	46915816	46901873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905595_46907809_46907970_46915722
transcript_108853.known	chr2	-	671	3	FSM	ENSG00000180398.13	ENST00000409147.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	361	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAGCATTTTGGTAAAA	2105	False	NA	1	True	NA	NA	NA	46941855	46905367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905595_46907809_46907970_46941571
transcript_108854.known	chr2	-	665	3	FSM	ENSG00000180398.13	ENST00000477791.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	50.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTAGTTCTACGTACTCA	-11	True	NA	NA	False	ATTAAA	-27	NA	46915791	46907528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46907970_46909022_46909178_46915722
transcript_108858.known	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	4782.40425646162	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-4	True	NA	23	True	AATAAA	-4	NA	47176516	47160179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
transcript_108861.known	chr2	-	1076	6	FSM	ENSG00000143933.20	ENST00000655728.1	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	4120.55232220148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTACACTATTTTTTTG	289	False	NA	-60	True	NA	NA	NA	47176223	47160338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176031
transcript_108863.known	chr2	-	1242	6	FSM	ENSG00000143933.20	ENST00000652974.1	1242	6	0	0	0	0	multi-exon	FALSE	canonical	3	9554	junction_1	684.268777601317	2358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTCTGCATCTGAGT	NA	False	NA	-12	True	AATAAA	-20	NA	47176623	47160163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
transcript_108864.known	chr2	-	1126	6	FSM	ENSG00000143933.20	ENST00000655450.1	1126	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4123.33714362529	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATGGTTGCTCTGCAT	NA	False	NA	-18	True	AATAAA	-14	NA	47176921	47160169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176848
transcript_108867.known	chr2	-	1046	4	FSM	ENSG00000234690.7	ENST00000413185.2	1046	4	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCACAATAAATGTAATGT	7	True	NA	NA	False	AATAAA	-1	NA	47344989	47331379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47332108_47332272_47332409_47332933_47333027_47344900
transcript_10887.known	chr1	+	2632	11	FSM	ENSG00000065243.20	ENST00000316005.11	2632	11	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_5	13.6165340670818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCTCCTATCTCAG	NA	False	NA	NA	False	NA	NA	NA	88684221	88806268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496
transcript_108873.known	chr2	+	1547	9	FSM	ENSG00000119888.11	ENST00000263735.9	1547	9	0	0	0	0	multi-exon	FALSE	canonical	3	2083	junction_2	174.182689653708	1461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAACTTTGACATTTC	7	True	NA	15	True	AATAAA	-16	NA	47369310	47387020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47369582_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_10888.nic	chr1	+	2118	3	ISM	ENSG00000065243.20	ENST00000316005.11	2632	11	3	44634	3	-43260	5prime_fragment	FALSE	canonical	3	158	junction_1	9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTAGGGAAGTTACCAA	NA	False	NA	NA	False	AATATA	-41	NA	88684224	88761634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_88684629_88740987_88741289_88760221
transcript_108895.known	chr2	+	1530	10	FSM	ENSG00000119888.11	ENST00000405271.5	1530	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1019.18845711238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTCCACAGTAAAATC	9843	False	NA	-1	True	ATTAAA	-1	NA	47345157	47386900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47345224_47368927_47369236_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_108897.known	chr2	+	3115	16	FSM	ENSG00000095002.15	ENST00000233146.7	3115	16	0	0	0	0	multi-exon	FALSE	canonical	3	1229	junction_10	175.624903321444	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	0	True	NA	30	True	AATAAA	-19	NA	47403155	47483223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_108898.nnic	chr2	+	3056	15	NIC	ENSG00000095002.15	novel	3115	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	62	junction_4	401.59635537821	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	-2	True	NA	30	True	AATAAA	-19	NA	47403064	47483223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_1089.known	chr1	-	1049	3	FSM	ENSG00000242485.6	ENST00000482352.1	1049	3	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCAGGAGAATTGCTT	-16	True	NA	NA	False	NA	NA	NA	1407290	1405108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1405887_1406908_1407020_1407130
transcript_108902.nic	chr2	+	1829	11	ISM	ENSG00000095002.15	ENST00000233146.7	3115	16	-91	12218	-2	-12216	5prime_fragment	FALSE	canonical	3	1229	junction_10	119.497322145728	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATATGAAGAAGCCCAG	-2	True	NA	NA	False	AATAAA	-2	NA	47403064	47471005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964
transcript_108910.known	chr2	-	13564	2	FSM	ENSG00000184261.5	ENST00000327876.5	13564	2	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_1	0	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCTTTAATGGCCT	-36	True	NA	-2	True	AATAAA	-22	NA	47570985	47509289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47521809_47569940
transcript_108911.known	chr2	-	833	2	FSM	ENSG00000184261.5	ENST00000493527.1	833	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTAAAACCAGAAAACC	1353	False	NA	NA	False	AATAAA	-16	NA	47570315	47543343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47543802_47569940
transcript_10892.known	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	20.5993527406405	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-2	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
transcript_108927.known	chr2	+	4265	10	FSM	ENSG00000116062.18	ENST00000234420.11	4265	10	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_3	273.367793672342	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	-8	True	NA	20	True	AATAAA	-20	NA	47783144	47806953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47783494_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_108929.known	chr2	+	3959	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	471.803029627229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	-2	True	NA	-18	True	NA	NA	NA	47783150	47806915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_10893.nic	chr1	-	1521	7	NIC	ENSG00000137947.12	novel	1599	7	NA	NA	32	292	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	50.0932463844512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTTATATGTTACAT	619	False	NA	0	True	AATAAA	-19	NA	88891912	88852931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891606
transcript_108930.known	chr2	+	4055	10	FSM	ENSG00000116062.18	ENST00000538136.1	4055	10	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	580.953388410957	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	773	False	NA	12	True	AATAAA	-12	NA	47783954	47806945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47784106_47790926_47791124_47795893_47796064_47798614_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_108935.nic	chr2	+	823	4	ISM	ENSG00000116062.18	ENST00000234420.11	4265	10	-90	8326	-27	0	5prime_fragment	FALSE	canonical	3	893	junction_3	25.381533094402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGATAAGAGTGAAGAAG	NA	False	NA	NA	False	TTTAAA	-39	NA	47783054	47798627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_47783494_47790926_47791124_47795893_47796064_47798610
transcript_108939.known	chr2	-	4760	23	FSM	ENSG00000138081.22	ENST00000403359.8	4760	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_22	34.9384642048235	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	-3	True	NA	-14	True	AATAAA	-17	NA	47906498	47806919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47808248_47808328_47808428_47809157_47809267_47809599_47809708_47810315_47810427_47813233_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839004_47839418_47839501_47839641_47839770_47905488
transcript_108944.known	chr2	+	5437	7	FSM	ENSG00000170802.17	ENST00000340553.8	5437	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	23.5984933605705	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	-11	True	NA	10	True	AATAAA	-19	NA	48314681	48379295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48314815_48328560_48328703_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
transcript_108949.known	chr2	-	555	1	FSM	ENSG00000272663.1	ENST00000609028.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTATGTGGATACTG	NA	False	NA	NA	False	AATAAA	-36	NA	48440597	48440042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_48440000_48440600
transcript_108954.known	chr2	+	3208	22	FSM	ENSG00000162869.16	ENST00000416913.5	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	24.151261803724	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	-32	True	NA	7	True	AATAAA	-17	NA	48440768	48515385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_108956.known	chr2	+	3173	22	FSM	ENSG00000162869.16	ENST00000294952.13	3173	22	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	14.8897688168588	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	-35	True	NA	8	True	AATAAA	-18	NA	48440765	48515386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_108964.known	chr2	+	2243	2	FSM	ENSG00000243244.7	ENST00000484110.1	2243	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCTACTGGAAATAAAAG	1	True	NA	NA	False	AATAAA	-17	NA	48529382	48531917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48529588_48529879
transcript_108967.nic	chr2	-	1315	2	ISM	ENSG00000179915.25	ENST00000626899.1	2543	6	13	108653	13	-49	5prime_fragment	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGATAAAGGAGGGCA	68	False	NA	NA	False	AAGAAA	-5	NA	51032523	51028422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_51029195_51031980
transcript_108973.known	chr2	-	2226	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	25.6851785094386	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGCTTTTTTTTTTT	-1	True	NA	-5	True	ATTAAA	-16	NA	53786953	53669979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
transcript_108976.known	chr2	-	1734	9	FSM	ENSG00000115239.24	ENST00000394717.3	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	77.3397536846349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	53787009	53670318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53786820
transcript_10898.known	chr1	-	1815	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	60.1428280288981	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTCATGTTTCCACC	-2	True	NA	-7	True	AATAAA	-17	NA	88992629	88935778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
transcript_108983.nnic	chr2	-	1087	4	NNC	ENSG00000115239.24	novel	623	3	NA	NA	19	-4328	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	93.6269192059634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTCTCTGTGTGTGTC	12	True	NA	-5	True	NA	NA	NA	53786990	53733788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_53734338_53750782_53750942_53765376_53765586_53786820
transcript_108984.known	chr2	+	1309	3	FSM	ENSG00000143942.5	ENST00000295304.5	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	11	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTAGTCTGTCATTCAC	-13	True	NA	17	True	CATAAA	-28	NA	53767803	53775196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53768022_53771906_53771943_53774141
transcript_108987.known	chr2	+	2446	14	FSM	ENSG00000068912.15	ENST00000185150.9	2446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	110.932145153704	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCATGTAGTCAATG	-14	True	NA	22	True	AATAAA	-14	NA	53787043	53818796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_108989.known	chr2	+	1756	13	FSM	ENSG00000068912.15	ENST00000405123.7	1756	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	142.497051626419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATTCCAAAATAAATCTC	22	True	NA	72	True	TATAAA	-28	NA	53787079	53818220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814859_53814936_53817897
transcript_108990.known	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	131.810127540422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	22	True	NA	45	True	AATAAA	-37	NA	53787079	53818819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_108994.nic	chr2	+	680	5	ISM	ENSG00000068912.15	ENST00000690769.1	2759	8	0	5737	0	1544	5prime_fragment	FALSE	canonical	3	368	junction_2	12.9687123493429	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTCTACCCAGTGAT	5	True	NA	NA	False	AAAAAG	-1	NA	53787020	53797795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731
transcript_108995.nic	chr2	+	418	2	FSM	ENSG00000068912.15	ENST00000494373.2	2214	2	-45	1841	0	-1841	multi-exon	FALSE	canonical	3	385	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCATACTTCCCCT	5	True	NA	NA	False	TATAAA	-43	NA	53787020	53794410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344
transcript_108996.known	chr2	+	485	3	ISM	ENSG00000068912.15	ENST00000689943.1	3995	15	29	25816	0	-1874	5prime_fragment	FALSE	canonical	0	0	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCATCATGACAACTGC	-14	True	NA	NA	False	TATAAA	-10	NA	53787043	53794377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_53787373_53788582_53788706_53794344
transcript_108997.known	chr2	-	7250	47	FSM	ENSG00000068878.15	ENST00000404125.6	7250	47	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_42	51.0730971024575	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTTTGTCTTCAT	0	True	NA	-4	True	AATAAA	-15	NA	53970993	53864068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53865574_53866084_53866224_53866746_53866881_53869375_53869539_53874338_53874495_53875626_53875756_53885689_53885776_53887258_53887468_53887857_53887990_53888720_53888813_53890103_53890209_53892807_53892961_53893673_53893800_53895006_53895077_53895582_53895737_53896803_53896886_53897869_53898000_53898300_53898355_53899880_53900018_53901349_53901560_53904024_53904157_53906597_53906694_53906805_53906869_53908319_53908419_53908509_53908566_53908783_53908841_53910074_53910131_53919150_53919247_53920192_53920351_53920888_53921105_53922516_53922585_53923048_53923119_53923320_53923420_53925538_53925690_53925958_53926024_53927393_53927484_53928116_53928304_53931834_53932101_53932667_53932761_53934604_53934728_53936086_53936162_53936763_53936828_53937390_53937541_53939955_53940001_53948420_53948538_53949142_53949284_53970542
transcript_109.known	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3382.43472467196	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
transcript_109000.known	chr2	+	1262	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.936029266015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	-2	True	NA	NA	False	CATAAA	-26	NA	53971112	54305300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
transcript_109005.known	chr2	+	993	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	16.7597401199687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	38	False	NA	NA	False	CATAAA	-26	NA	54115503	54305300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
transcript_109008.known	chr2	+	10211	36	FSM	ENSG00000115306.16	ENST00000356805.9	10211	36	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	200.660806296779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGGTGCAGTCCATGT	4	True	NA	NA	False	AATAAA	-17	NA	54456326	54671446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_54456519_54526371_54526567_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913_54655999_54657849_54658047_54659153_54659267_54659935_54660000_54664452_54664692_54665914_54666089_54667603_54667647_54668350
transcript_109009.nic	chr2	+	8985	35	NIC	ENSG00000115306.16	novel	9075	31	NA	NA	-439	0	combination_of_known_junctions	FALSE	canonical	3	387	junction_1	169.541341377217	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTGACTAGTTGTTG	-15	True	NA	21	True	ATTAAA	-14	NA	54557954	54669674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913_54655999_54657849_54658047_54659153_54659267_54659935_54660000_54664452_54664692_54665914_54666089_54667603_54667647_54668350
transcript_10901.known	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_12	29.9085411435151	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-20	True	NA	-1	True	AATAAA	-23	NA	88992776	88935772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
transcript_109013.nic	chr2	+	6356	28	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-17	6363	-17	-4345	5prime_fragment	FALSE	canonical	3	387	junction_1	120.495934508996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAGAAATGATCGACA	2	True	NA	26	True	NA	NA	NA	54558376	54655945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913
transcript_109018.nic	chr2	+	1285	8	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-32	39978	-32	-6874	5prime_fragment	FALSE	canonical	3	387	junction_1	43.4229319646677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTGAAAAGTATGAATCA	-13	True	NA	NA	False	NA	NA	NA	54558361	54622330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299
transcript_109019.nic	chr2	+	1259	7	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-37	40796	-37	-7692	5prime_fragment	FALSE	canonical	3	387	junction_1	45.8745269427623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGGTGCCAATTTTG	-18	True	NA	NA	False	NA	NA	NA	54558356	54621512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399
transcript_109022.nic	chr2	+	1548	4	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-692	46066	-692	-12962	5prime_fragment	FALSE	canonical	3	387	junction_1	59.1175852762009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAATCTGCCAAGGA	9	False	NA	NA	False	NA	NA	NA	54557701	54616242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206
transcript_109027.known	chr2	-	4697	9	FSM	ENSG00000115310.19	ENST00000337526.11	4697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	644.077198400937	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	0	True	NA	-5	True	AATAAA	-17	NA	55050451	54972188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55025085_55027486_55028163_55028221_55049744
transcript_109031.known	chr2	-	2390	8	FSM	ENSG00000115310.19	ENST00000357732.8	2390	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	610.243511114328	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-11	True	NA	-5	True	AATAAA	-17	NA	55050544	54972188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55028163_55028221_55049744
transcript_109041.known	chr2	-	2333	7	FSM	ENSG00000115310.19	ENST00000317610.11	2333	7	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_6	126.399828586382	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-11	True	NA	-5	True	AATAAA	-17	NA	55050544	54972188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
transcript_109053.nic	chr2	-	1775	3	ISM	ENSG00000115310.19	ENST00000337526.11	4697	9	-125	54411	22	607	5prime_fragment	FALSE	canonical	0	0	junction_1	61.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCCCAAATAGTAACAG	693	False	NA	NA	False	AATAGA	-7	NA	55050576	55026599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55027486_55028163_55028221_55049744
transcript_109060.known	chr2	+	705	6	FSM	ENSG00000143947.15	ENST00000402285.7	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_1	6103.88383244635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	NA	False	NA	10	True	NA	NA	NA	55231902	55235588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55232109_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_109062.known	chr2	+	785	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	0	0	0	0	multi-exon	FALSE	canonical	1	5160	junction_3	4046.06468559266	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTGTGTTTCTGTCC	-11	True	NA	5	True	AATATA	-2	NA	55232687	55235853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_109063.known	chr2	+	796	5	FSM	ENSG00000143947.15	ENST00000404735.1	796	5	0	0	0	0	multi-exon	FALSE	canonical	1	5160	junction_2	4362.03567729564	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGCCAACCACTTGTA	-21	True	NA	-93	True	NA	NA	NA	55232677	55235755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_109071.known	chr2	-	2536	16	FSM	ENSG00000085760.15	ENST00000263629.9	2536	16	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_13	27.0871843415951	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	0	True	NA	24	True	ATTAAA	-42	NA	55269231	55236594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_109075.known	chr2	-	2386	15	FSM	ENSG00000085760.15	ENST00000403721.5	2386	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	50.389351401798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-12	True	NA	24	True	ATTAAA	-42	NA	55269243	55236594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55269168
transcript_10908.known	chr1	-	991	3	FSM	ENSG00000213516.10	ENST00000413769.1	991	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	31.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTCCTAAGAGATCTG	-3	True	NA	NA	False	AGTAAA	-28	NA	88992759	88983350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88984067_88988251_88988352_88992584
transcript_109086.nic	chr2	-	1859	12	ISM	ENSG00000085760.15	ENST00000263629.9	2536	16	-35	6860	-23	-3444	5prime_fragment	FALSE	canonical	3	136	junction_9	10.0387678279823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGATTCAAATGTA	79	False	NA	NA	False	AAGAAA	-33	NA	55269266	55243454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_109090.nic	chr2	-	1731	12	ISM	ENSG00000085760.15	ENST00000263629.9	2536	16	-35	6988	-23	-3572	5prime_fragment	FALSE	canonical	3	136	junction_9	10.0387678279823	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAAAGGAACACAAAGAAG	79	False	NA	NA	False	AATAGA	-7	NA	55269266	55243582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_109100.known	chr2	-	583	4	FSM	ENSG00000085760.15	ENST00000441307.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	62.4624331543013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAGTTACAGATT	-2	True	NA	NA	False	GGGGCT	-30	NA	55269347	55263646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55263866_55267568_55267636_55268577_55268740_55269212
transcript_109104.nic	chr2	-	2896	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	453	-48	55	intron_retention	TRUE	canonical	3	44	junction_4	12.1455879282334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGGATAGCTTTAAAAAT	-2	True	NA	NA	False	ATTAAA	-6	NA	55419943	55334788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_109106.nic	chr2	-	2695	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	654	-48	0	intron_retention	FALSE	canonical	3	44	junction_4	12.1455879282334	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAATTAAAAAAGAATTG	-2	True	NA	NA	False	AAGAAA	-37	NA	55419943	55334989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_109111.known	chr2	-	2316	13	FSM	ENSG00000115355.18	ENST00000647517.1	2316	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	19.3749551970808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGCAAGATTGAATTTG	126	False	NA	NA	False	AAAAAG	-44	NA	55419815	55335015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_109112.nic	chr2	-	2363	13	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	5147	-48	-2767	intron_retention	FALSE	canonical	3	44	junction_2	6.97017455544216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGGCTCAGTAAAAAGG	-2	True	NA	NA	False	AAAAAG	-5	NA	55419943	55339482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_109114.nic	chr2	-	2066	12	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	9443	-48	0	intron_retention	FALSE	canonical	3	44	junction_1	7.19618815533211	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAGATTGAAGAAT	-2	True	NA	NA	False	AATAAA	-19	NA	55419943	55343778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_109117.nic	chr2	-	2053	11	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	10031	-48	97	intron_retention	FALSE	canonical	3	44	junction_8	6.95772951471958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTAAGAGGTAGATC	-2	True	NA	NA	False	AAAAAG	-43	NA	55419943	55344366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_10912.known	chr1	-	4799	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCGTAAATACTTTTC	-16	True	NA	-11	True	ATTAAA	-16	NA	88992772	88979455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88984067_88992584
transcript_109121.known	chr2	-	1270	2	FSM	ENSG00000115355.18	ENST00000642784.1	1270	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTGATGAGATG	280	False	NA	NA	False	AGTAAA	-20	NA	55419661	55418291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55418917_55419016
transcript_109122.known	chr2	+	2154	1	FSM	ENSG00000162997.15	ENST00000563365.1	2154	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTCTTATTTGTAA	NA	False	NA	5	True	AATAAA	-14	NA	55282318	55284472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55282300_55284500
transcript_109123.known	chr2	+	1184	10	FSM	ENSG00000163001.12	ENST00000349456.9	1184	10	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	16.3850277937655	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	44	True	NA	21	True	AATAAA	-21	NA	55519717	55545079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219_55544370_55544906
transcript_109124.nic	chr2	+	1041	9	ISM	ENSG00000163001.12	ENST00000349456.9	1184	10	-54	734	18	51	5prime_fragment	FALSE	canonical	3	249	junction_2	14.9666295470958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCCACTGGGGAGGT	-10	True	NA	20	True	ACTAAA	-25	NA	55519663	55544345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219
transcript_109127.known	chr2	-	5506	17	FSM	ENSG00000275052.5	ENST00000616407.2	5506	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	104.02035558005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-11	True	NA	0	True	AATAAA	-18	NA	55617622	55547291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_109133.known	chr2	-	4310	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	94.6019497097649	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	3	True	NA	NA	False	ATTAAA	-20	NA	55617608	55548377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_109142.known	chr2	-	5243	15	FSM	ENSG00000275052.5	ENST00000611717.4	5243	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	121.31761737569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-3	True	NA	0	True	AATAAA	-18	NA	55617614	55547291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_109153.nic	chr2	-	2136	2	ISM	ENSG00000275052.5	ENST00000612688.1	2981	3	1104	-172	-154	172	3prime_fragment	FALSE	canonical	3	391	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAACCTGAAGATGTTT	1098	False	NA	NA	False	ATTAAA	-14	NA	55617776	55614003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55615507_55617143
transcript_109154.known	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	192.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-6	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55615507_55617143_55617979_55618065
transcript_109156.known	chr2	+	465	1	FSM	ENSG00000272606.1	ENST00000608113.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGAAAGTAAGTCTGCT	-11	True	NA	30	True	AATACA	-22	NA	55617908	55618373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55617900_55618400
transcript_109160.known	chr2	-	4549	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	0	0	0	multi-exon	FALSE	canonical	2	265	junction_9	47.0959094970893	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGACTATTATTTAATAA	-7	True	NA	0	True	ATTAAA	-23	NA	55693844	55634060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_10917.known	chr1	+	7170	3	FSM	ENSG00000171488.15	ENST00000370454.9	7170	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATATTTGTCCCTCTCTT	-6	True	NA	NA	False	AATAAA	-21	NA	89633119	89719533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89633323_89686469_89686612_89712708
transcript_109177.known	chr2	-	2708	12	FSM	ENSG00000115380.20	ENST00000355426.8	2708	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_11	17.7563863496587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	7	True	NA	-5	True	AATAAA	-25	NA	55923782	55865966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55922898_55922940_55923710
transcript_109180.known	chr2	-	3024	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	10.2610915598683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	NA	False	NA	-5	True	AATAAA	-25	NA	55924139	55865966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_10919.known	chr1	+	8034	9	FSM	ENSG00000197147.15	ENST00000640258.1	8034	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	69.4329712744601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGCTGGAAGAAGTTG	9	True	NA	3	True	AATAAA	-36	NA	89524853	89597848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89525023_89526961_89526987_89549914_89549972_89558710_89559037_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_109191.nic	chr2	+	2001	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	40	junction_12	83.9839376020673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-42	True	NA	11	True	AATAAA	-19	NA	58046626	58159871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154753_58154803_58159348
transcript_109192.nic	chr2	+	1996	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	83.9839376020673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-42	True	NA	11	True	AATAAA	-19	NA	58046626	58159871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
transcript_109193.nic	chr2	+	1979	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	63.9797602544916	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	1245	False	NA	11	True	AATAAA	-19	NA	58046552	58159871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_109195.known	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	33.7576123102463	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-4	True	NA	11	True	AATAAA	-19	NA	58046805	58159871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_109204.nic	chr2	-	1792	15	NIC	ENSG00000115392.12	novel	1658	14	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	238.250168640324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	NA	False	NA	-5	True	AATAAA	-18	NA	58241410	58159242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58194228_58194274_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_109206.known	chr2	-	1698	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	157.516600045649	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-3	True	NA	-9	True	AATAAA	-14	NA	58241350	58159246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_109212.known	chr2	-	849	10	FSM	ENSG00000115392.12	ENST00000403676.5	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	216.47889299216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTTCGGTGAAGAGCT	45	False	NA	NA	False	NA	NA	NA	58241302	58159754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58241217
transcript_109216.known	chr2	-	522	6	FSM	ENSG00000115392.12	ENST00000481670.2	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	293.757314802542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGGTGTGCATGGA	88	False	NA	-4	True	AATAAA	-16	NA	58241259	58213504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_58213707_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_109219.known	chr2	+	1268	6	FSM	ENSG00000233723.10	ENST00000429664.6	1268	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	11.443775600736	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTATATGCCAAGTAAT	-4	True	NA	94	True	AATAAA	-19	NA	58428337	58931156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_58428465_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_109225.nnic	chr2	+	928	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	26.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCAGGGATGTTTTC	2753	False	NA	8	True	AATAAA	-44	NA	60417727	60424689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_60417982_60419876_60420153_60424291
transcript_109229.nnic	chr2	+	736	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	31.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCAGGGATGTTTTC	2754	False	NA	8	True	AATAAA	-44	NA	60417728	60424689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_60417982_60420067_60420153_60424291
transcript_109233.known	chr2	-	4052	5	FSM	ENSG00000119866.22	ENST00000356842.9	4052	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	167.772725733356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGTGCTGTCTCGT	1879	False	NA	NA	False	AATAAA	-35	NA	60553571	60451145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60452667_60460681_60462425_60468731_60468834_60545970_60546301_60553215
transcript_109234.known	chr2	-	1519	5	FSM	ENSG00000119866.22	ENST00000489516.7	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	192.213423048444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGATTTGAATTTGTC	4525	False	NA	NA	False	AATATA	-18	NA	60550925	60451780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60550867
transcript_109235.known	chr2	-	2494	5	FSM	ENSG00000119866.22	ENST00000359629.10	2494	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	166.477475953956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGTGAACTACCTTATA	7	True	NA	NA	False	AATAAA	-14	NA	60553634	60451166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60553215
transcript_109238.known	chr2	-	993	4	FSM	ENSG00000119866.22	ENST00000643459.1	993	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	185.848205682906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTATGCAAAGGTTACT	5	True	NA	NA	False	NA	NA	NA	60550907	60461903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60462425_60468731_60468834_60545970_60546301_60550867
transcript_109240.known	chr2	+	7348	22	FSM	ENSG00000115421.13	ENST00000238714.8	7348	22	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	14.0258911867577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGATTGAGTGATGTT	13	True	NA	NA	False	AATAAA	-17	NA	60756267	60802086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_109241.nic	chr2	+	3604	22	NIC	ENSG00000115421.13	novel	7348	22	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_1	27.606647462649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCTCCTTAGTCTA	-7	True	NA	19	True	TTTAAA	-6	NA	60756247	60798468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_60756350_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_109242.known	chr2	+	11108	10	FSM	ENSG00000162924.15	ENST00000394479.4	11108	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	3.28107179116298	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGAAATTTTGTTGCT	-16	True	NA	16	True	AATAAA	-19	NA	60881573	60931612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991_60901084_60916876_60917018_60918190_60918296_60918393_60918607_60920040_60920110_60920573_60920643_60921762
transcript_109244.nic	chr2	+	753	4	ISM	ENSG00000162924.15	ENST00000295025.12	11255	11	-94	30582	-94	-55	5prime_fragment	FALSE	canonical	3	5	junction_2	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAAAGAAGCTATTAT	332	False	NA	NA	False	AAGAAA	-4	NA	60881426	60901028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991
transcript_10925.nnic	chr1	+	3253	7	NIC	ENSG00000197147.15	novel	8034	9	NA	NA	0	27	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	48.780973066692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCAGGGCTTTAAATGA	-16	True	NA	NA	False	NA	NA	NA	89524828	89593393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_89525023_89549914_89549972_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_109250.known	chr2	+	4472	4	FSM	ENSG00000162928.9	ENST00000295030.6	4472	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	6.16441400296898	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	-1	True	NA	6	True	AATAAA	-17	NA	61017719	61051990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471
transcript_109254.nic	chr2	+	1762	4	NIC	ENSG00000162928.9	novel	4472	4	NA	NA	0	-2733	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	58.0344725141876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGTGTTGGGTTTATA	-1	True	NA	61	True	AATAAA	-19	NA	61017719	61049257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_61017875_61031418_61032114_61045725_61045852_61048471
transcript_109258.known	chr2	+	1014	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	9	True	NA	19	True	AATAAA	-29	NA	61017729	61019080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61017852_61018188
transcript_109260.known	chr2	-	1227	3	FSM	ENSG00000162927.14	ENST00000398658.2	1227	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-6	True	NA	-8	True	AATAAA	-16	NA	61017193	61009847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61010889_61011764_61011906_61017148
transcript_109261.known	chr2	+	1533	2	FSM	ENSG00000162928.9	ENST00000444100.2	1533	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTCTTCTTTATAGTGG	NA	False	NA	6	True	AATAAA	-16	NA	61017224	61019067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61017852_61018161
transcript_109262.known	chr2	+	4578	22	FSM	ENSG00000162929.14	ENST00000402291.6	4578	22	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_15	43.3727711693819	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGGAAAGTCTCTTT	-3	True	NA	8	True	AATAAA	-15	NA	61065870	61124280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_109268.nic	chr2	+	1037	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	78.9604331295111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	NA	False	NA	17	True	AATAAA	-21	NA	61145080	61164828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
transcript_109270.known	chr2	+	879	4	FSM	ENSG00000237651.8	ENST00000426997.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.6877523799553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	NA	False	NA	-3	True	AATAAA	-1	NA	61145067	61164808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61145197_61162841_61162956_61163051_61163233_61164353
transcript_109274.known	chr2	-	2532	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGGGTATACCAGTGGA	-9	True	NA	-24	True	AATAAA	-17	NA	61144950	61141591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61143946_61144772
transcript_109278.known	chr2	+	1509	8	FSM	ENSG00000173209.23	ENST00000642505.1	1509	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	166.214761494807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCTAAATGGTTGAATT	867	False	NA	7	True	AATAAA	-18	NA	61178377	61186769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61185619_61185979_61186082_61186445_61186498_61186616
transcript_109282.known	chr2	+	2813	7	FSM	ENSG00000173209.23	ENST00000642732.1	2813	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	150.876329046894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCAATCAATCAATCAG	191	False	NA	-49	True	AATGAA	-34	NA	61177701	61187499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_109289.known	chr2	+	2437	7	FSM	ENSG00000173209.23	ENST00000357022.6	2437	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	136.103718620111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	-31	True	NA	3	True	AATAAA	-20	NA	61177417	61187551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61178385_61178980_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_109295.known	chr2	+	6574	6	FSM	ENSG00000173209.23	ENST00000394457.7	6574	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	94.3385393145346	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATCAGTGGTCTCAA	18	True	NA	28	True	AATAAA	-22	NA	61177528	61191203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_1093.known	chr1	+	515	2	FSM	ENSG00000224870.8	ENST00000570344.1	515	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCCTGTTATGGGTAAC	-2	True	NA	NA	False	NA	NA	NA	1399561	1400544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1399690_1400157
transcript_10930.known	chr1	+	7664	6	FSM	ENSG00000197147.15	ENST00000330947.7	7664	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	24.9719843024138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGACTGTACTAATTT	-16	True	NA	16	True	AATAAA	-18	NA	89524828	89597861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89525023_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_109300.known	chr2	+	1971	5	FSM	ENSG00000173209.23	ENST00000471542.5	1971	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	66.2589616580278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	1157	False	NA	11	True	NA	NA	NA	61178667	61186912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186498_61186616
transcript_109302.known	chr2	+	402	2	FSM	ENSG00000173209.23	ENST00000493310.1	402	2	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTCCTCATCTGTGAAA	1620	False	NA	NA	False	NA	NA	NA	61179130	61181680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319
transcript_109308.known	chr2	-	4988	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_18	245.697801622689	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCTTGATTTACAAAC	-11	True	NA	71	True	AATGAA	-4	NA	61538356	61477848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_109311.known	chr2	-	4437	24	FSM	ENSG00000082898.19	ENST00000678081.1	4437	24	0	0	0	0	multi-exon	TRUE	canonical	1	39	junction_8	352.621722806586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	830	False	NA	-86	True	NA	NA	NA	61537780	61477688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_109319.nic	chr2	-	1482	4	ISM	ENSG00000082898.19	ENST00000443240.5	565	7	-111	20606	4	3455	intron_retention	FALSE	canonical	3	1071	junction_3	44.1537717024894	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAGGAAAATAAAGAATTA	NA	False	NA	-2	True	GATAAA	-38	NA	61538737	61522611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_61522684_61526419_61526522_61533771_61533904_61537561
transcript_109320.known	chr2	-	720	3	FSM	ENSG00000082898.19	ENST00000481214.1	720	3	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_2	29.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCACCTCTGACACCAA	916	False	NA	NA	False	AATATA	-8	NA	61537694	61526066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61526522_61533771_61533904_61537561
transcript_109322.known	chr2	-	3684	6	FSM	ENSG00000170264.13	ENST00000405894.3	3684	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	11.534296684237	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAATATGGTTTTTAT	354	False	NA	-7	True	AATAAA	-17	NA	61854143	61824855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61853858
transcript_109335.known	chr2	-	2376	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	0	0	0	multi-exon	FALSE	canonical	3	2445	junction_12	262.683241199549	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCCAGTGATTTT	-29	True	NA	-1	True	NA	NA	NA	61888656	61868084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
transcript_109344.known	chr2	-	2261	13	FSM	ENSG00000115484.15	ENST00000544079.2	2261	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	819.153153499935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGCAAATCTTACTTAAA	NA	False	NA	-41	True	AATAAA	-15	NA	61888671	61868124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61885019_61885073_61888380
transcript_10936.known	chr1	+	3950	3	FSM	ENSG00000171492.14	ENST00000337338.9	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	27.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTGTATTTTCTGTG	1	True	NA	NA	False	NA	NA	NA	89821031	89936611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89821292_89843637_89843783_89933066
transcript_109361.known	chr2	-	388	2	FSM	ENSG00000115484.15	ENST00000461370.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACGAATTGGGTGAAC	169	False	NA	-15	True	AATAAA	-19	NA	61888458	61887947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61888258_61888380
transcript_109362.known	chr2	+	911	3	FSM	ENSG00000173163.11	ENST00000311832.6	695	3	-27	-189	0	189	multi-exon	FALSE	canonical	3	383	junction_2	37	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCATGGCTCACTGCA	-6	True	NA	NA	False	ATTAAA	-41	NA	61905646	62136247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61905859_62000700_62000983_62135830
transcript_109364.known	chr2	+	604	2	FSM	ENSG00000173163.11	ENST00000471704.1	604	2	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGAATCCTTTTTCAG	-6	True	NA	NA	False	NA	NA	NA	61905646	62001092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61905859_62000700
transcript_109365.known	chr2	+	2761	2	FSM	ENSG00000170340.11	ENST00000301998.5	2761	2	0	0	0	0	multi-exon	FALSE	canonical	3	871	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTGTAATGTGTAAT	-16	True	NA	20	True	AATAAA	-17	NA	62196114	62224731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_62196356_62222211
transcript_109368.known	chr2	-	1654	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTGTCTTGTGCAAT	-12	True	NA	NA	False	AATAAA	-31	NA	62506195	62500217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
transcript_10937.known	chr1	+	3345	3	FSM	ENSG00000171492.14	ENST00000394593.7	3345	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTTTTGAGGGGTCT	709	False	NA	20	True	ATTAAA	-20	NA	89821920	89936001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89822186_89843637_89843783_89933066
transcript_109371.known	chr2	+	1311	9	FSM	ENSG00000115504.15	ENST00000405482.5	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20.2592571433407	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTGGATATGAGCAAG	-44	True	NA	NA	False	CATAAA	-39	NA	62705651	62864904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730
transcript_109376.known	chr2	+	2828	5	FSM	ENSG00000115507.10	ENST00000282549.7	2828	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	1.78535710713571	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTTGTCAGTGTTGCTCT	3	True	NA	NA	False	AATAAA	-15	NA	63050829	63057831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63050898_63051248_63051318_63052879_63053088_63054046_63054199_63055500
transcript_10938.known	chr1	+	9729	12	FSM	ENSG00000162664.17	ENST00000340281.9	9729	12	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	37.9355695623056	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTCCTGTCTGAAAAA	-35	True	NA	9	True	AATAAA	-16	NA	89995109	90035533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_109382.known	chr2	-	4894	18	FSM	ENSG00000143951.16	ENST00000272321.12	4894	18	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	14.9864991145145	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAAAGTTTTTGCTTC	0	True	NA	-43	True	AATAAA	-19	NA	63588477	63119558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63259306_63259410_63313247_63313312_63378385_63378510_63381905_63382095_63404047_63404658_63433744_63433937_63437420_63437555_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_109393.known	chr2	-	1377	1	FSM	ENSG00000279485.1	ENST00000624325.1	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGAAAGAAACT	NA	False	NA	NA	False	AAAACA	-8	NA	63519268	63517891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_63517900_63519300
transcript_109396.known	chr2	+	1296	9	FSM	ENSG00000014641.21	ENST00000233114.13	1296	9	0	0	0	0	multi-exon	FALSE	canonical	3	5517	junction_6	349.887839171355	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCAGACTCTGTTTCT	-9	True	NA	16	True	AATAAA	-18	NA	63588962	63607197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_109399.known	chr2	+	1443	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1945.65974912753	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	6	True	NA	13	True	AATAAA	-15	NA	63589150	63607194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_1094.known	chr1	+	2196	2	FSM	ENSG00000224870.8	ENST00000418833.2	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAACAAACTGCAAATTA	6	True	NA	-1	True	GATAAA	-12	NA	1399529	1402026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1400304_1400604
transcript_10940.known	chr1	+	9433	12	FSM	ENSG00000162664.17	ENST00000370447.3	9433	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	70.8999994171747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTCCTGTCTGAAA	-8	True	NA	7	True	AATAAA	-14	NA	89995136	90035531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007611_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_109405.known	chr2	+	808	6	FSM	ENSG00000014641.21	ENST00000409476.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	2252.7072956778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	1	True	NA	-90	True	NA	NA	NA	63588972	63607091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589047_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_109406.known	chr2	+	893	4	FSM	ENSG00000014641.21	ENST00000485781.5	893	4	0	0	0	0	multi-exon	FALSE	canonical	3	6069	junction_3	136.238353222904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTTTTTTCTAGTTC	42	False	NA	NA	False	NA	NA	NA	63588608	63597657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398
transcript_109407.known	chr2	+	634	2	FSM	ENSG00000014641.21	ENST00000462944.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTTGTGTTATAGA	13	True	NA	NA	False	AATAAA	-29	NA	63588984	63590974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589047_63590402
transcript_10941.known	chr1	+	1956	10	FSM	ENSG00000162664.17	ENST00000394583.7	1956	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	70.517137396995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCCCTGGATTAGCAG	-33	True	NA	8	True	AATAAA	-17	NA	89995111	90028226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005093_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_109420.known	chr2	+	2057	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1806.44199740816	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	6	True	NA	-80	True	NA	NA	NA	63840968	63891451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_109427.nic	chr2	+	2772	11	NIC	ENSG00000169764.16	novel	2150	10	NA	NA	109	0	intron_retention	FALSE	canonical	3	117	junction_1	1793.87017646205	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	160	False	NA	29	True	AATAAA	-13	NA	63841334	63891560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_63842205_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_10943.nic	chr1	+	1147	8	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	18168	-24	-10861	5prime_fragment	FALSE	canonical	3	142	junction_4	41.7709986297983	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGAACTGCATCTGGA	NA	False	NA	NA	False	AAGAAA	-3	NA	89995085	90017365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316
transcript_109434.known	chr2	+	2105	10	FSM	ENSG00000169764.16	ENST00000394417.7	2105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	1083.09311296768	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	6	True	NA	29	True	AATAAA	-13	NA	63840968	63891560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_109436.known	chr2	+	1699	10	FSM	ENSG00000169764.16	ENST00000678298.1	1699	10	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_5	1704.75016814854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAATACTTTCCTTCTT	10	True	NA	NA	False	AATAGA	-41	NA	63841026	63891394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885770_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_109441.known	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	2782	junction_1	729.256766920106	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	2	True	NA	29	True	AATAAA	-13	NA	63841895	63891560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_10945.nic	chr1	+	1005	7	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	22389	-24	6695	5prime_fragment	FALSE	canonical	3	142	junction_4	37.9239004088744	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAGGAAGAAAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	89995085	90013144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125
transcript_10946.nic	chr1	+	1071	7	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	22323	-24	6761	5prime_fragment	FALSE	canonical	3	142	junction_4	37.9239004088744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAGAAATACGGAGATG	NA	False	NA	NA	False	NA	NA	NA	89995085	90013210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125
transcript_109473.known	chr2	-	4337	23	FSM	ENSG00000143952.20	ENST00000409558.8	4337	23	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_21	28.649491940168	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAGGCAACTTTTTT	490	False	NA	-8	True	AATAAA	-20	NA	64019072	63892145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_63893536_63897495_63897591_63899473_63899582_63912344_63912426_63912539_63912662_63913222_63913311_63914181_63914288_63916899_63916964_63919882_63919996_63920445_63920628_63921205_63921336_63933672_63934014_63942464_63942562_63944599_63944656_63947382_63947491_63949036_63949164_63962057_63962444_63965834_63965967_63968956_63968992_63972165_63972245_63981645_63981852_63983863_63984020_64018937
transcript_109475.known	chr2	+	1555	4	FSM	ENSG00000225889.10	ENST00000451350.3	1582	4	27	0	1	0	multi-exon	FALSE	canonical	3	20	junction_2	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-7	True	NA	19	True	ATTAAA	-21	NA	64228416	64252859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419
transcript_109477.nnic	chr2	+	1120	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2554	3897	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	44.8998886412873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGGCTGAATTGATG	NA	False	NA	16	True	AATAAA	-27	NA	64252788	64261507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64260866
transcript_109486.nnic	chr2	+	781	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2554	0	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_2	7	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	ATTAAA	-21	NA	64252788	64257610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_64253044_64254979_64255082_64257186
transcript_109492.known	chr2	+	1685	2	FSM	ENSG00000225889.10	ENST00000655199.1	1685	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGAATATGCCTT	NA	False	NA	NA	False	NA	NA	NA	64250234	64252504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64251835_64252419
transcript_109495.nnic	chr2	-	876	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGAGAGAGAGAAAG	7804	False	NA	NA	False	AAAAAG	-16	NA	64255437	64209812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_-_64210167_64254915
transcript_109497.nic	chr2	-	3576	8	NIC	ENSG00000197329.12	novel	3716	7	NA	NA	-23	-207	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	217.993914912264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGAATTCGTCTCTGTG	NA	False	NA	-14	True	AGTAAA	-17	NA	64144443	64092858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104553_64104598_64104700_64104831_64108239_64108380_64144080
transcript_1095.nnic	chr1	+	2169	2	FSM	ENSG00000224870.8	ENST00000685968.1	2170	2	-2	3	1	0	multi-exon	FALSE	canonical	3	24	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGTCTCTTTTCCTA	-4	True	NA	16	True	TATAAA	-17	NA	1399519	1402043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1400250_1400604
transcript_109500.known	chr2	-	3716	7	FSM	ENSG00000197329.12	ENST00000358912.5	3716	7	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_6	42.0849009609015	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTTTTCTAAGTTA	-1	True	NA	NA	False	AATAAA	-25	NA	64144420	64092651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
transcript_109506.known	chr2	+	548	5	FSM	ENSG00000119862.13	ENST00000420552.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	72.431001649846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGCTTGGCTGATTTA	-8	True	NA	NA	False	CATAAA	-22	NA	64454520	64458412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456267_64456466_64458284
transcript_109507.known	chr2	+	3856	5	FSM	ENSG00000119862.13	ENST00000238875.10	3856	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	12.747548783982	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCCAGTTTATAACAT	-2	True	NA	17	True	AATAAA	-17	NA	64454161	64461381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456287_64456466_64458284
transcript_10951.nic	chr1	+	893	6	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	25340	-24	3744	5prime_fragment	TRUE	canonical	3	142	junction_4	41.3424721079908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCAGCCATTTAATAAG	NA	False	NA	-50	True	AATAAA	-9	NA	89995085	90010193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087
transcript_109512.known	chr2	+	4113	10	FSM	ENSG00000119844.16	ENST00000238855.11	4113	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	40.5319566042998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTGGTG	-14	True	NA	NA	False	AATAAA	-8	NA	64524304	64592997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64581189_64581274_64585421_64585546_64591887
transcript_109513.known	chr2	+	4040	9	FSM	ENSG00000119844.16	ENST00000238856.8	4040	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	10.4992559260169	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTGGTGTCTTTGTA	-14	True	NA	NA	False	AATAAA	-16	NA	64524304	64593005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591884
transcript_109521.known	chr2	-	318	1	FSM	ENSG00000179833.4	ENST00000608423.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGTCTATTATTTCC	1	True	NA	NA	False	ATTAAA	-36	NA	64750895	64750577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_64750600_64750900
transcript_109523.known	chr2	-	608	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	63	0	5	0	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTCACTAGGTAAAGG	19	True	NA	36	True	AATAGA	-3	NA	65056163	65047853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65048213_65055914
transcript_109525.known	chr2	+	4563	8	FSM	ENSG00000115902.11	ENST00000234256.4	4563	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.989743318610787	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTTCCTTTATTCCC	18	True	NA	29	True	AATGAA	-20	NA	64989398	65023865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64990171_65001447_65001491_65003952_65004016_65010596_65010764_65016439_65016674_65018070_65018266_65018544_65018680_65020911
transcript_109535.known	chr2	+	5803	7	FSM	ENSG00000011523.14	ENST00000377990.7	5803	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	28.0381684296405	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	-11	True	NA	7	True	AATAAA	-16	NA	65056415	65087004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281_65074405_65077867_65077965_65082535_65082710_65083638
transcript_109551.known	chr2	-	2448	6	FSM	ENSG00000138069.18	ENST00000409784.8	2448	6	0	0	0	0	multi-exon	FALSE	canonical	3	1288	junction_4	75.7083879104555	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGGCGTGCTTGGTGGA	6	True	NA	NA	False	AATAAA	-20	NA	65130106	65086853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65097970_65098067_65104733_65104807_65129892
transcript_109559.known	chr2	-	1333	5	FSM	ENSG00000138069.18	ENST00000409751.1	1333	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_3	592.711776498493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	8	True	NA	-12	True	AATAAA	-29	NA	65130104	65087870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65104733_65104807_65129892
transcript_109563.nic	chr2	+	2314	4	ISM	ENSG00000011523.14	ENST00000377990.7	5803	7	-62	12514	-12	6	5prime_fragment	FALSE	canonical	3	73	junction_1	33.3466640010661	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTATGTTATAGCTC	NA	False	NA	21	True	AGTAAA	-16	NA	65056353	65074490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281
transcript_109564.nic	chr2	+	3104	4	ISM	ENSG00000011523.14	ENST00000377990.7	5803	7	-62	11724	-12	29	5prime_fragment	FALSE	canonical	3	73	junction_1	33.3466640010661	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGAGTGTGGTGGCAT	NA	False	NA	NA	False	CATAAA	-4	NA	65056353	65075280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281
transcript_109569.known	chr2	-	2254	4	FSM	ENSG00000138069.18	ENST00000409892.5	2254	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	617.017737904583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGGCGTGCTTGGTGG	7	True	NA	NA	False	AATAAA	-19	NA	65130105	65086854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65088938_65089071_65104733_65104807_65129892
transcript_109570.known	chr2	-	1198	4	FSM	ENSG00000138069.18	ENST00000398529.7	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	606.007150672883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	11	True	NA	-12	True	AATAAA	-29	NA	65130101	65087870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65097970_65098067_65104733_65104807_65129892
transcript_109581.known	chr2	+	2685	10	FSM	ENSG00000138071.15	ENST00000377982.8	2685	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	444.237535170455	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTAATTACAAAATACAAG	12	True	NA	NA	False	AATAAA	-15	NA	65227836	65270146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_65227958_65239851_65239963_65242048_65242064_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_109583.known	chr2	+	3783	9	FSM	ENSG00000138071.15	ENST00000260641.10	3783	9	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_6	64.4534715899772	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTGTCATTTCTT	6	True	NA	21	True	AATAAA	-22	NA	65227830	65271253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_65227958_65239851_65239963_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_109592.known	chr2	-	4519	6	FSM	ENSG00000198369.10	ENST00000356388.9	4519	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	9.1214034007931	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGGCTTTGGGGTATTT	-1	True	NA	-2	True	TATAAA	-15	NA	65432599	65310850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65314170_65316733_65316884_65331986_65332052_65334604_65334774_65344718_65344897_65431961
transcript_109593.nnic	chr2	-	4350	5	NIC	ENSG00000198369.10	novel	4519	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_3	62.7315709989794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGGCTTTGGGGTATTT	-1	True	NA	-2	True	TATAAA	-15	NA	65432599	65310850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_65314170_65316733_65316884_65331986_65332052_65344718_65344897_65431961
transcript_109601.known	chr2	+	4948	6	FSM	ENSG00000143971.9	ENST00000272342.6	4948	6	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	23.5202040807473	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	10	True	NA	-21	True	NA	NA	NA	67397332	67412089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
transcript_109603.known	chr2	-	772	6	FSM	ENSG00000197223.12	ENST00000409302.1	772	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	204.541829462827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATTTACCATCTCT	-15	True	NA	NA	False	NA	NA	NA	68063009	68042676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047316_68053060_68053138_68062957
transcript_109605.known	chr2	-	2233	5	FSM	ENSG00000197223.12	ENST00000355848.7	2233	5	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_4	131.287851684762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	11	True	NA	NA	False	TTTAAA	-35	NA	68062983	68041129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062944
transcript_109606.known	chr2	-	2241	5	FSM	ENSG00000197223.12	ENST00000410067.8	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	84.6492764292761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	-10	True	NA	NA	False	TTTAAA	-35	NA	68063004	68041129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062957
transcript_10961.known	chr1	-	5238	3	FSM	ENSG00000233593.11	ENST00000659034.2	5247	3	9	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATACCTTCAAAACCT	-22	True	NA	NA	False	AAAAAG	-39	NA	90851657	90778450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90783424_90789397_90789488_90851482
transcript_109613.nic	chr2	-	1403	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	-90	1278	-68	677	multi-exon	FALSE	canonical	3	113	junction_7	11.0176111340908	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTGTCATGGCGG	NA	False	NA	NA	False	TATAAA	-7	NA	68157617	68131082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_109616.known	chr2	+	2242	7	FSM	ENSG00000115946.8	ENST00000263657.7	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_6	54.8859929510456	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGCATCTCTAAAACC	-19	True	NA	13	True	ATTAAA	-18	NA	68157887	68176238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68158142_68158379_68158530_68161682_68161767_68162264_68162326_68162545_68162664_68173346_68173418_68174734
transcript_109629.known	chr2	-	3024	6	FSM	ENSG00000221823.11	ENST00000234310.8	3024	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	7.1442284397967	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTATTCAGTGGTC	-15	True	NA	-11	True	AATAAA	-15	NA	68252532	68178856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68181011_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252124
transcript_10963.known	chr1	-	2036	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	91.6854526204797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	27	True	NA	-27	True	AATAAA	-18	NA	91021457	90915303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
transcript_109631.known	chr2	+	979	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGGTTCCTGTCTCTC	1268	False	NA	NA	False	AATAAA	-23	NA	68252869	68253848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68252900_68253800
transcript_109632.known	chr2	-	1896	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGACTTGCATTCTTA	17	True	NA	-1	True	AATAAA	-15	NA	68319949	68293009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68294027_68317156_68317308_68319221
transcript_109633.known	chr2	-	5699	4	FSM	ENSG00000204923.4	ENST00000377957.4	5699	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTATTATTTTGAATTA	-9	True	NA	-15	True	AATAAA	-17	NA	68467294	68459421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68464371_68464839_68465179_68466143_68466471_68467210
transcript_109637.known	chr2	+	3823	10	FSM	ENSG00000169621.10	ENST00000303795.9	3823	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.71722460186015	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGTGTAATGAAAATGA	10	True	NA	NA	False	AATAAA	-17	NA	68467584	68580162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68467828_68490189_68490262_68502730_68502904_68513079_68513228_68513547_68513681_68526060_68526243_68537871_68538228_68545186_68545313_68567340_68567388_68577819
transcript_109640.known	chr2	+	4287	3	FSM	ENSG00000169618.7	ENST00000303786.5	4287	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGAGCGTCATGTCCTG	NA	False	NA	20	True	AATGAA	-22	NA	68643578	68658251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68643849_68645661_68646307_68654879
transcript_109647.known	chr2	+	5858	18	FSM	ENSG00000169604.21	ENST00000303714.9	5858	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_17	31.4603061817889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTTCTGGTTATTTG	-7	True	NA	14	True	AATAAA	-14	NA	69013178	69249327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69152168_69152265_69170247_69170290_69181785_69181882_69182492_69182661_69193334_69193416_69245224
transcript_109649.nic	chr2	+	2299	17	ISM	ENSG00000169604.21	ENST00000303714.9	5858	18	138	55230	11	21539	5prime_fragment	FALSE	canonical	3	42	junction_16	28.0896305377981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTAATTGCATTCTCCA	29	False	NA	NA	False	AAGAAA	-23	NA	69013316	69194097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69152168_69152265_69170247_69170290_69181785_69181882_69182492_69182661_69193334
transcript_10965.known	chr1	-	1253	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	81.7081527280003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCTAAAAGAAATATGT	16	False	NA	NA	False	AAAAAG	-25	NA	91022272	90916184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
transcript_109656.known	chr2	+	1126	13	FSM	ENSG00000169604.21	ENST00000482235.2	1126	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	31.4124665627447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATGATTTGTGCT	77	False	NA	NA	False	TATAAA	-17	NA	69013499	69135169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69134994
transcript_109659.known	chr2	+	1989	13	FSM	ENSG00000169604.21	ENST00000681816.1	1989	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	31.9464612889893	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCACCACTTGCTGTTAA	17	False	NA	-45	True	NA	NA	NA	69013439	69146305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145327
transcript_109662.known	chr2	+	1449	10	FSM	ENSG00000169604.21	ENST00000463335.2	1449	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	4.99876527964533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGATTCTGCAGCTTT	0	True	NA	18	True	AATAAA	-27	NA	69013356	69103444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841
transcript_109667.known	chr2	-	8632	19	FSM	ENSG00000198380.13	ENST00000361060.5	8632	19	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_4	58.8591119685677	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTATTAATTTACTT	5	True	NA	-11	True	AATAAA	-13	NA	69387248	69319779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69326234_69326913_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_109680.known	chr2	-	1034	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	118.802185096376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTTGCTTTACC	540	False	NA	-21	True	AATAAA	-29	NA	69437475	69396119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
transcript_109681.known	chr2	-	898	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_5	22.0315173127509	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	4	True	NA	-27	True	AATAAA	-23	NA	69437435	69396125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
transcript_109682.known	chr2	-	1058	7	FSM	ENSG00000169599.13	ENST00000394305.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	155.271804695293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTTTACCTCATATG	387	False	NA	-14	True	AATAAA	-36	NA	69437628	69396112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437270
transcript_109683.nic	chr2	-	762	7	NIC	ENSG00000169599.13	novel	898	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	119.438617428926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	4	True	NA	-27	True	AATAAA	-23	NA	69437435	69396125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_109684.known	chr2	-	453	2	FSM	ENSG00000115977.21	ENST00000492192.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTAGAAACCATC	112	False	NA	NA	False	AAGAAA	-37	NA	69643845	69643092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69643275_69643574
transcript_109687.known	chr2	+	1414	13	FSM	ENSG00000196975.16	ENST00000409920.5	1414	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	41.8876639225547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTACTTTGTGT	-2	True	NA	9	True	AATAAA	-23	NA	69741973	69825781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806433_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_109690.known	chr2	+	2651	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	25.7826114960365	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGAATACTTGCCTTT	0	True	NA	NA	False	ATTAAA	-35	NA	69742133	69827112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_1097.known	chr1	-	1632	3	FSM	ENSG00000235098.9	ENST00000520296.5	1632	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	931	False	NA	-1	True	AATAAA	-17	NA	1421444	1418419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1419550_1420815_1421006_1421132
transcript_109703.known	chr2	+	4161	14	FSM	ENSG00000087338.5	ENST00000282570.4	4161	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_8	37.9724284902057	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGAAAGCTTTGTG	-13	True	NA	4	True	AATAAA	-37	NA	69829659	69881384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69830153_69837546_69837671_69839456_69839554_69840941_69841040_69843148_69843262_69844130_69844197_69847542_69847628_69849651_69849743_69854822_69854961_69861277_69861348_69864899_69864976_69869718_69869865_69871744_69871833_69878908
transcript_109715.known	chr2	+	766	7	FSM	ENSG00000124380.11	ENST00000450162.6	766	7	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_6	148.531422040366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGATAAATATTTTTAT	7	True	NA	10	True	AATAAA	-21	NA	69893963	69904671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253_69904426_69904511
transcript_109716.known	chr2	+	1425	6	FSM	ENSG00000124380.11	ENST00000244227.8	1425	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	20.4215572373901	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATGTTTCATTA	-1	True	NA	14	True	ATTAAA	-33	NA	69893955	69905236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253
transcript_109721.known	chr2	+	5549	6	FSM	ENSG00000059728.11	ENST00000264444.7	5549	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	4.42718872423573	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTTTCTGATGTTT	-1	True	NA	NA	False	AATAAA	-21	NA	69915108	69942945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69915404_69916120_69916221_69921735_69921766_69935350_69935466_69937234_69937395_69938096
transcript_109722.known	chr2	-	2817	8	FSM	ENSG00000179818.16	ENST00000664754.1	2817	8	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_1	10.6866309767229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTACTTGAGGGAGGGGG	0	True	NA	NA	False	NA	NA	NA	70086946	70049210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70050269_70051202_70051306_70053730_70053793_70055713_70055911_70059642_70059681_70083537_70083688_70085546_70085625_70085815
transcript_109726.known	chr2	-	2259	7	FSM	ENSG00000179818.16	ENST00000653289.1	2259	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	8.83962040411741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTCTGTTGTTTTAAG	3	True	NA	-26	True	NA	NA	NA	70086273	70048709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70050253_70051202_70051306_70055713_70055911_70059642_70059681_70083537_70083688_70085546_70085625_70086123
transcript_109728.known	chr2	-	3314	6	FSM	ENSG00000179818.16	ENST00000653596.1	3314	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	9.19565114605812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	8790	False	NA	-24	True	NA	NA	NA	70086529	70030014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70059642_70059681_70083537_70083688_70085546
transcript_109732.known	chr2	-	2527	6	FSM	ENSG00000179818.16	ENST00000654716.1	2527	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	11.3560556532627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCATAAGAAGAGAGGGA	8675	False	NA	NA	False	NA	NA	NA	70086644	70048939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70050269_70051202_70051306_70059642_70059681_70083537_70083688_70085546_70085625_70085815
transcript_109735.known	chr2	-	3305	5	FSM	ENSG00000179818.16	ENST00000659941.1	3305	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	12.3970762682174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	8420	False	NA	-24	True	NA	NA	NA	70086899	70030014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70085815
transcript_109736.known	chr2	-	2393	5	FSM	ENSG00000179818.16	ENST00000425601.6	2393	5	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	10.6301458127346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGAGTTTGCATCTAT	-9	True	NA	-14	True	ATTAAA	-9	NA	70086285	70030004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086123
transcript_109738.known	chr2	-	2257	5	FSM	ENSG00000179818.16	ENST00000657575.2	2304	5	29	18	0	0	multi-exon	FALSE	canonical	3	28	junction_1	10.0591997693654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	-16	True	NA	-24	True	NA	NA	NA	70087013	70030014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086977
transcript_109739.known	chr2	-	546	5	FSM	ENSG00000179818.16	ENST00000425333.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	14.9227175809234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACCCTGAACATTTCAT	7976	False	NA	NA	False	NA	NA	NA	70087343	70031752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70087280
transcript_109747.known	chr2	-	1852	4	FSM	ENSG00000179818.16	ENST00000437019.2	1852	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6.12825877028341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAGGGAGCATGGCCC	-19	True	NA	-94	True	NA	NA	NA	70086965	70048777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70048958_70051202_70051306_70083537_70083688_70085546
transcript_109752.known	chr2	-	2156	5	FSM	ENSG00000179818.16	ENST00000670036.1	2156	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.850659461993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAGACTCTGTTTCAA	3	True	NA	NA	False	NA	NA	NA	70086273	69990219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69991842_69996685_69996889_70051202_70051306_70085546_70085625_70086123
transcript_109753.known	chr2	-	1543	1	FSM	ENSG00000244617.3	ENST00000320256.6	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAATGTGTTGATTGA	-1	True	NA	2	True	AATAAA	-19	NA	69961631	69960088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69960100_69961600
transcript_109754.known	chr2	+	1727	1	FSM	ENSG00000169564.7	ENST00000303577.7	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGGTGCCTTTTT	-3	True	NA	61	True	AAAAAG	-21	NA	70087476	70089203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_70087500_70089200
transcript_109755.known	chr2	-	662	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	15	2	15	0	multi-exon	FALSE	canonical	3	40	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	1	True	NA	0	True	AAAAAG	-18	NA	70125317	70124035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70124426_70125045
transcript_109762.known	chr2	-	3823	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	126.124938057467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-3	True	NA	-8	True	ATTAAA	-22	NA	70248580	70210203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_109778.known	chr2	-	4633	12	FSM	ENSG00000116001.17	ENST00000415783.6	4633	12	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_8	133.50030179184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-28	True	NA	0	True	AATAAA	-25	NA	70248660	70209443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_10978.known	chr1	-	514	3	FSM	ENSG00000122482.22	ENST00000498303.5	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAACCACTGGACA	-4	True	NA	NA	False	AATAAA	-7	NA	91022081	90940948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90941310_90982309_90982371_91021989
transcript_10979.nic	chr1	-	1951	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-27	24350	-27	1301	5prime_fragment	FALSE	canonical	3	83	junction_2	55.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTCATGAAAGACTCTG	-16	True	NA	NA	False	AAAACA	-9	NA	91021500	90939647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_109797.known	chr2	-	2524	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	8.47800349197124	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-4	True	NA	NA	False	AATAAA	-24	NA	70191019	70149884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
transcript_1098.known	chr1	-	2024	4	FSM	ENSG00000235098.9	ENST00000537107.6	2024	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.64098759787715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	-3	True	NA	-1	True	AATAAA	-17	NA	1421276	1418419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1419550_1420051_1420593_1420796_1421006_1421132
transcript_109800.known	chr2	-	904	8	FSM	ENSG00000116001.17	ENST00000477044.6	904	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	202.257161019514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	21	True	NA	-7	True	AATAAA	-15	NA	70248611	70224423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70224630_70227734_70227823_70228343_70228463_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_109805.known	chr2	-	549	4	FSM	ENSG00000116001.17	ENST00000481650.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	241.629652337806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACATGTTTGCAGTAATG	10	True	NA	NA	False	TATAAA	-4	NA	70248622	70229189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70229319_70230755_70230855_70236072_70236176_70248404
transcript_109806.known	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	38.160712781603	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	12	True	NA	14	True	AATAAA	-15	NA	70258136	70281185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
transcript_109818.known	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4036	junction_2	1853.69852517129	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-16	True	NA	-1	True	ATTAAA	-38	NA	70293740	70281361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
transcript_10982.nic	chr1	-	1963	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-178	24489	74	1162	5prime_fragment	FALSE	canonical	3	83	junction_2	55.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTACTGCTGTGAAGAG	637	False	NA	NA	False	GATAAA	-2	NA	91021651	90939786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_109820.known	chr2	-	566	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	3884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTCCTTCTGTCCATC	-16	True	NA	-6	True	ATTAAA	-33	NA	70293740	70281366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70281685_70288067_70288193_70293617
transcript_109822.known	chr2	-	936	4	FSM	ENSG00000035141.8	ENST00000450256.1	936	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1064.45009277091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCCTGTAACAAGCCAGA	10	True	NA	NA	False	NA	NA	NA	70302056	70297010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70300981_70301407_70301604_70301924
transcript_109824.known	chr2	-	2107	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_2	1131	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-1	True	NA	-3	True	AATAAA	-22	NA	70302067	70295975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70300981_70301603
transcript_109825.known	chr2	-	1810	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	2222	junction_2	34.5	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTCTTCTTTCCTTA	NA	False	NA	-2	True	AATAAA	-23	NA	70302090	70295974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70300981_70301924
transcript_109826.known	chr2	-	2398	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	1114.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	10	True	NA	-3	True	AATAAA	-22	NA	70302056	70295975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70301604_70301924
transcript_109827.known	chr2	-	561	2	FSM	ENSG00000035141.8	ENST00000498665.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	2222	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATACAAAAAATTAGCC	54	False	NA	NA	False	NA	NA	NA	70302012	70300507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70300981_70301924
transcript_109828.known	chr2	-	2654	17	FSM	ENSG00000075340.23	ENST00000355733.7	2654	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	43.6247761455575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGAACCCCCTCCTTCC	14	True	NA	-50	True	AAAAAG	-3	NA	70768177	70663482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70663736_70672877_70673007_70673240_70673327_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_109836.known	chr2	-	9290	16	FSM	ENSG00000075340.23	ENST00000264436.9	9290	16	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_10	12.3486391512947	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCCCCATCTCTG	-9	True	NA	-13	True	AGTAAA	-22	NA	70768200	70656783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_109842.known	chr2	-	3741	16	FSM	ENSG00000075340.23	ENST00000407644.6	3741	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	35.0158059548351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCGTGTCTTGAAAGAAT	586	False	NA	-13	True	NA	NA	NA	70767715	70662129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767603
transcript_109845.nic	chr2	-	2285	14	ISM	ENSG00000075340.23	ENST00000355733.7	2654	17	-130	11226	-82	-31	5prime_fragment	FALSE	canonical	3	111	junction_8	12.3872429128619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTGGAGAGGAAGAAACT	NA	False	NA	NA	False	AAGAAA	-1	NA	70768307	70674708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_109847.known	chr2	-	3776	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	11.6054943884352	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	89	False	NA	-9	True	AATAAA	-16	NA	70768212	70675092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_10985.nic	chr1	-	1271	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-178	25181	74	470	5prime_fragment	FALSE	canonical	3	83	junction_2	55.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGAAAAATGGATGTAAGCA	637	False	NA	NA	False	GATAAA	-42	NA	91021651	90940478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_109853.known	chr2	+	2371	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	17.8885438199983	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTCTACTCCCCTC	0	True	NA	NA	False	AATAAA	-15	NA	71068647	71079808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_109855.nic	chr2	+	1198	10	NIC	ENSG00000124357.13	novel	1801	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	76.7281556962189	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	NA	False	NA	22	True	AATAAA	-22	NA	71068277	71078641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_71068337_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_109857.nnic	chr2	+	1347	10	NNC	ENSG00000124357.13	novel	1801	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	79.5046391999925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	23	False	NA	22	True	AATAAA	-22	NA	71068633	71078641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_71068842_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_109862.known	chr2	+	2343	9	FSM	ENSG00000124357.13	ENST00000418807.7	2343	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	82.3634286258167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTTGTCTACTCCC	-7	True	NA	NA	False	AATAAA	-12	NA	71068587	71079805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71068713_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_109866.known	chr2	+	878	7	FSM	ENSG00000124357.13	ENST00000443872.6	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	92.4602016485411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTTTACAAAAACAAAC	-3	True	NA	-34	True	NA	NA	NA	71068591	71078585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71068713_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_109867.known	chr2	-	3365	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	9.69535971483266	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-23	True	NA	NA	False	AATAAA	-16	NA	70994873	70985941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
transcript_109870.known	chr2	-	758	5	FSM	ENSG00000144043.12	ENST00000433258.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	51.9681392778306	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCAGTCCTCCCCTGT	18	True	NA	NA	False	NA	NA	NA	70994832	70988353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70993695_70993776_70994687
transcript_109875.known	chr2	+	2986	9	FSM	ENSG00000124357.13	ENST00000475709.5	2986	9	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	15.8034806292791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATTGGACTGCATTATC	2	True	NA	17	True	AATAAA	-17	NA	71068649	71078636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_109876.nic	chr2	-	1340	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-43	0	intron_retention	FALSE	canonical	3	31	junction_2	36	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	1235	False	NA	-14	True	AATAAA	-15	NA	71130282	71109686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_71110123_71124205_71124544_71129716
transcript_109877.known	chr2	-	824	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	14	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	14	True	NA	-14	True	AATAAA	-15	NA	71130229	71109686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_71110123_71124205_71124544_71130179
transcript_10988.known	chr1	-	5541	6	FSM	ENSG00000122482.22	ENST00000337393.10	5541	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_5	52.0099990386464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-10	True	NA	-27	True	AATAAA	-18	NA	91022035	90915303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021989
transcript_109882.known	chr2	+	2164	11	FSM	ENSG00000124383.9	ENST00000244230.7	2164	11	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	31.9795246994073	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	-4	True	NA	16	True	AATAAA	-17	NA	71130633	71150101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222_71149454_71149865
transcript_109884.nic	chr2	+	2076	10	ISM	ENSG00000124383.9	ENST00000244230.7	2164	11	-314	814	-312	0	5prime_fragment	FALSE	canonical	3	279	junction_4	33.1695978604237	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAAGGAAAAAGAAATATC	-12	True	NA	-18	True	TATAAA	-40	NA	71130319	71149287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222
transcript_109886.known	chr2	+	2068	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	17.6971042829046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCATCTCATTGACT	-6	True	NA	NA	False	ATTAAA	-21	NA	71130631	71139425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
transcript_109888.nic	chr2	+	1442	4	ISM	ENSG00000124383.9	ENST00000498451.2	2068	5	-311	4629	-311	1628	5prime_fragment	FALSE	canonical	3	284	junction_2	15.6276108929747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTAGTAATTTAAGGA	-11	True	NA	NA	False	AAAAAG	-10	NA	71130320	71134796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625
transcript_109889.nic	chr2	+	1328	2	ISM	ENSG00000124383.9	ENST00000498451.2	2068	5	-637	5960	-637	297	5prime_fragment	FALSE	canonical	3	321	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAACGAAAAGATGA	NA	False	NA	NA	False	AAAACA	-9	NA	71129994	71133465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71130755_71132897
transcript_109890.known	chr2	-	6300	4	FSM	ENSG00000124374.9	ENST00000244221.9	6300	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	17.5562587763516	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCAGTGGTACCCT	-20	True	NA	-26	True	AATAAA	-13	NA	71227103	71182737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_71188536_71189844_71190022_71202451_71202601_71226927
transcript_1099.known	chr1	-	876	2	FSM	ENSG00000235098.9	ENST00000442470.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGGAGTGTGAGGGC	13	True	NA	NA	False	NA	NA	NA	1421260	1419137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1419550_1420796
transcript_109903.known	chr2	+	3518	13	FSM	ENSG00000075292.19	ENST00000410075.5	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	191.515157508631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCGGCTCCAGCTTATC	7	True	NA	1	True	AATAAA	-2	NA	71276592	71395670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
transcript_10991.nnic	chr1	+	3176	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	3	65	junction_1	82.2698643399416	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	5	True	NA	20	True	AATAAA	-22	NA	91500818	91525764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_91500878_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_109916.nic	chr2	+	2659	8	ISM	ENSG00000075292.19	ENST00000410075.5	3518	13	-36	25671	-4	4294	5prime_fragment	FALSE	canonical	3	144	junction_1	120.139035101428	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	-29	True	NA	47	True	GATAAA	-41	NA	71276556	71369999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_109917.nic	chr2	+	2616	8	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	-17	4294	combination_of_known_junctions	FALSE	canonical	3	216	junction_1	96.7373890953213	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	NA	False	NA	47	True	GATAAA	-41	NA	71331710	71369999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_71331866_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_109918.nic	chr2	+	2597	8	ISM	ENSG00000075292.19	ENST00000264447.9	6487	28	-42	65062	12	4294	5prime_fragment	FALSE	canonical	3	168	junction_1	112.252266919521	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	NA	False	NA	47	True	GATAAA	-41	NA	71331739	71369999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_109922.nic	chr2	+	1054	7	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	0	4294	combination_of_known_junctions	FALSE	canonical	2	27	junction_1	170.948985242837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	-16	True	NA	47	True	GATAAA	-41	NA	71331763	71369999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_71331876_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_10993.known	chr1	+	3215	12	FSM	ENSG00000097046.13	ENST00000234626.11	3215	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	36.7499929723949	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-12	True	NA	20	True	AATAAA	-22	NA	91500850	91525764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_109932.known	chr2	+	6790	56	FSM	ENSG00000135636.15	ENST00000409582.7	6790	56	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	8.27210786891959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTAACATGGAGCTCT	50	False	NA	NA	False	NA	NA	NA	71453721	71686648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513239_71513333_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71620546_71620610_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
transcript_109933.known	chr2	+	6739	56	FSM	ENSG00000135636.15	ENST00000429174.6	6739	56	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	8.47600404837676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTAACATGGAGCTCT	50	False	NA	NA	False	NA	NA	NA	71453721	71686648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71549349_71549392_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71620546_71620610_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
transcript_109934.known	chr2	+	6727	55	FSM	ENSG00000135636.15	ENST00000409762.5	6727	55	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	8.25967446224258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTAACATGGAGCTCT	50	False	NA	NA	False	NA	NA	NA	71453721	71686648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513239_71513333_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
transcript_109935.known	chr2	+	6952	55	FSM	ENSG00000135636.15	ENST00000258104.8	6952	55	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	8.47009181876922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTCAGTGTGTGTA	-23	True	NA	15	True	TATAAA	-16	NA	71453560	71686763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71549349_71549392_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
transcript_109939.known	chr2	-	2583	23	FSM	ENSG00000144036.16	ENST00000634650.1	2583	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	52.1497367330106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTGCAGCCTCTGTGT	7	True	NA	NA	False	NA	NA	NA	72826019	72179308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72179462_72182893_72182906_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_10994.known	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	92.5314331224935	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-23	True	NA	20	True	AATAAA	-22	NA	91501107	91525764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_109941.known	chr2	-	5910	22	FSM	ENSG00000144036.16	ENST00000272427.11	5910	22	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	22.9871303834408	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTGTCTCATGGGTAT	-7	True	NA	-3	True	ATTAAA	-33	NA	72826033	72175983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72179462_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_109946.known	chr2	+	1432	3	FSM	ENSG00000116096.6	ENST00000234454.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	12	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGCTTGCTTTCTCCTC	5	True	NA	15	True	AATAAA	-18	NA	72887407	72892158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72887737_72888313_72888605_72891346
transcript_109947.known	chr2	+	947	3	FSM	ENSG00000116096.6	ENST00000498749.1	947	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	50	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTTAGGAGAGAGGTTA	-21	True	NA	NA	False	NA	NA	NA	72887381	72891753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72887737_72888419_72888605_72891346
transcript_109948.nic	chr2	+	2307	2	NIC	ENSG00000116096.6	novel	1432	3	NA	NA	-272	0	intron_retention	FALSE	canonical	3	103	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGCTTGCTTTCTCCTC	NA	False	NA	15	True	AATAAA	-18	NA	72887109	72892158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_72888605_72891346
transcript_109949.known	chr2	+	480	3	FSM	ENSG00000135638.14	ENST00000473732.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTCCGCGGTCTCCCAG	548	False	NA	NA	False	NA	NA	NA	72918180	72925541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72918373_72924308_72924494_72925438
transcript_109950.known	chr2	+	2144	3	FSM	ENSG00000135638.14	ENST00000258106.11	2144	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCTCCTCAGCCCAAGA	12	True	NA	NA	False	NA	NA	NA	72917518	72934891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72918373_72924308_72924494_72933786
transcript_109961.nic	chr2	-	4776	14	NIC	ENSG00000144040.13	novel	4072	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	49.8345190599932	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	0	True	NA	-2	True	AATAAA	-17	NA	73071328	72942035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73070459
transcript_109962.known	chr2	-	4016	14	FSM	ENSG00000144040.13	ENST00000272433.7	4016	14	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	38.6506121877158	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	9	True	NA	-2	True	AATAAA	-17	NA	73071712	72942035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_109969.nnic	chr2	-	4445	13	NIC	ENSG00000144040.13	novel	4016	14	NA	NA	-482	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_12	51.684069649705	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	11	True	NA	-2	True	AATAAA	-17	NA	73072210	72942035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73071603
transcript_109973.nic	chr2	-	4098	13	NIC	ENSG00000144040.13	novel	4016	14	NA	NA	-184	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	54.1769221060858	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	8962	False	NA	-2	True	AATAAA	-17	NA	73071912	72942035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_72945100_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_109976.known	chr2	-	840	12	FSM	ENSG00000144040.13	ENST00000410065.5	840	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	59.9870509442808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCAGCGGCCTGGGG	-3	True	NA	NA	False	NA	NA	NA	73071724	72945021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72945100_72961130_72961249_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_10998.known	chr1	-	2908	17	FSM	ENSG00000069702.11	ENST00000465892.6	2908	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	6.47078772252652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCCGGCCCAACCCAG	108	False	NA	NA	False	NA	NA	NA	91886109	91683728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_91683858_91695671_91695780_91698088_91698131_91708662_91708784_91712242_91712543_91716235_91716395_91716567_91716709_91719311_91719465_91719892_91720228_91721954_91722145_91727658_91727807_91729804_91729974_91734775_91734960_91758612_91758751_91797286_91797472_91861470_91861645_91885877
transcript_109984.nic	chr2	-	1661	6	ISM	ENSG00000144040.13	ENST00000416579.5	895	11	-489	46266	-489	0	5prime_fragment	FALSE	canonical	3	177	junction_4	22.9381777829016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	4	True	NA	NA	False	NA	NA	NA	73072217	73019446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_109988.known	chr2	-	1690	3	FSM	ENSG00000144040.13	ENST00000472259.5	1690	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	18	True	NA	NA	False	TATAAA	-30	NA	73071266	73049085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73049900_73058527_73058597_73070459
transcript_109990.known	chr2	-	351	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	86	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTTGCTGACTGTT	9212	False	NA	-1	True	AATAAA	-39	NA	73071662	73053328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73053552_73058527_73058597_73071603
transcript_109995.nnic	chr2	-	5999	6	NNC	ENSG00000135631.17	novel	6285	6	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	19.3390796058137	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTCTGTTGTGTTCCT	-45	True	NA	-5	True	AATAAA	-17	NA	73112980	73073381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_73075725_73075992_73076183_73079650_73081346_73088049_73088750_73088878_73089316_73112346
transcript_109997.known	chr2	-	6285	6	FSM	ENSG00000135631.17	ENST00000486777.7	6285	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	12.6269552941317	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTCTGTTGTGTTCCT	-13	True	NA	-5	True	AATAAA	-17	NA	73112948	73073381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73075725_73075992_73076183_73079650_73081664_73088049_73088750_73088878_73089316_73112346
transcript_11.known	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00035_+_0_1100
transcript_11000.known	chr1	-	6339	17	FSM	ENSG00000069702.11	ENST00000212355.9	6339	17	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_13	4.72857007984443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTTGTTATCATTA	4	True	NA	-1	True	AATAAA	-22	NA	91886151	91680342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_91683858_91695671_91695780_91698088_91698131_91708662_91708784_91712242_91712543_91716235_91716395_91716567_91716709_91719311_91719465_91719892_91720231_91721954_91722145_91727658_91727807_91729804_91729974_91734775_91734960_91758612_91758751_91797286_91797472_91861470_91861645_91885877
transcript_110001.known	chr2	-	4342	5	FSM	ENSG00000135631.17	ENST00000258098.6	4342	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	17.1828402774396	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTCTGTTGTGTTCCT	5189	False	NA	-5	True	AATAAA	-17	NA	73113018	73073381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73075725_73075992_73076183_73088049_73088750_73088878_73089316_73112346
transcript_110006.known	chr2	+	2554	13	FSM	ENSG00000135632.12	ENST00000389501.9	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	23.4003501873132	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	-8	True	NA	30	True	AATAAA	-14	NA	73214244	73227221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_110015.nic	chr2	+	2685	12	ISM	ENSG00000135632.12	ENST00000389501.9	2554	13	-37	0	-14	0	intron_retention	FALSE	canonical	3	229	junction_2	14.9423133173123	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	NA	False	NA	30	True	AATAAA	-14	NA	73214207	73227221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630
transcript_110026.known	chr2	-	1090	5	FSM	ENSG00000135617.4	ENST00000258083.3	1090	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	13.729530217746	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGTGTCCTAGAATAA	2	True	NA	-9	True	AATAAA	-42	NA	73233239	73228009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73228575_73228794_73228963_73229460_73229571_73230112_73230214_73233093
transcript_110030.known	chr2	+	2031	13	FSM	ENSG00000135624.17	ENST00000539919.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1314.8033017232	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	780	False	NA	-12	True	AATAAA	-30	NA	73234235	73253021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_110039.known	chr2	+	1847	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	0	0	0	0	multi-exon	FALSE	canonical	3	3200	junction_5	259.388569046645	6027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTTTGTAAATTATTT	-1	True	NA	25	True	AATAAA	-14	NA	73234307	73253005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_11004.known	chr1	+	1436	7	FSM	ENSG00000172031.7	ENST00000370383.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.73353657780945	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGTAAGTGCTTCCA	-25	True	NA	NA	False	AATATA	-21	NA	92029984	92063538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92030311_92032504_92032591_92042822_92042981_92045531_92045661_92050316_92050421_92052509_92052659_92063054
transcript_11006.known	chr1	+	5944	17	FSM	ENSG00000189195.15	ENST00000635934.1	5944	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	3.75624480032918	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGAGTTTTCTGTGAC	NA	False	NA	7	True	AATAAA	-24	NA	92080304	92184725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349_92139431_92147179_92147269_92147683_92147787_92166957_92167141_92167847_92167986_92168865_92168996_92171398_92171461_92176828_92177547_92177810_92177899_92178311_92178452_92180264_92182596_92183863
transcript_110071.known	chr2	+	1674	10	FSM	ENSG00000135624.17	ENST00000540468.5	1674	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	1075.64689694787	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	780	False	NA	-12	True	AATAAA	-30	NA	73234235	73253021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_110084.known	chr2	+	1234	7	FSM	ENSG00000135624.17	ENST00000398422.2	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1329.56091331771	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	-1	True	NA	24	True	AATAAA	-13	NA	73234307	73253004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_110086.known	chr2	-	2372	2	FSM	ENSG00000135625.8	ENST00000545030.1	2372	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATCTGCCATGTAAGC	75	False	NA	NA	False	ATTAAA	-20	NA	73293701	73290929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73292782_73293181
transcript_110087.known	chr2	+	12844	23	FSM	ENSG00000116127.20	ENST00000613296.6	12844	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.9501842444998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGTAAACAATTCTTT	-2	True	NA	56	True	AATAAA	-14	NA	73385835	73609916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73386193_73408621_73408748_73419122_73419319_73422856_73422975_73424429_73424903_73426452_73426554_73432197_73432292_73447959_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
transcript_110089.known	chr2	+	12595	22	FSM	ENSG00000116127.20	ENST00000484298.5	12595	22	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	34.3703980634288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGTATTTTAGAAATAG	4	True	NA	19	True	AATAAA	-15	NA	73385757	73609715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73386193_73419122_73419319_73422856_73422975_73424429_73424903_73426452_73426554_73432197_73432292_73447959_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
transcript_110091.known	chr2	-	816	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	425.898109880755	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	NA	False	NA	NA	False	ATTAAA	-17	NA	73737400	73729889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
transcript_110094.known	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_4	179.769991934138	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-1	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_110095.nic	chr2	-	584	5	NIC	ENSG00000144034.16	novel	819	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	389.753126991946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-2	True	NA	NA	False	ATTAAA	-17	NA	73737381	73729889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_73730030_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_110097.known	chr2	-	575	5	FSM	ENSG00000144034.16	ENST00000463231.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	433.049073431638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTGGTGATTTTA	4	True	NA	NA	False	TTTAAA	-2	NA	73737375	73729168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_110098.known	chr2	-	1653	9	FSM	ENSG00000144048.10	ENST00000272444.7	1653	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	14.8318702461962	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGGTATTTTTGTG	NA	False	NA	1	True	NA	NA	NA	73780157	73762183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73762860_73766417_73766595_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_11010.known	chr1	-	2006	19	FSM	ENSG00000174842.17	ENST00000370360.8	2006	19	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	39.3432190966739	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCTATAATGATACA	-7	True	NA	-8	True	AATAAA	-19	NA	92298987	92246401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_110100.known	chr2	+	2040	13	FSM	ENSG00000124356.17	ENST00000682379.1	2040	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	144.761777490546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCTTTTTCTTTTGTGT	13	True	NA	NA	False	ATTAAA	-25	NA	73828986	73873659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73870142_73870353_73873351
transcript_110101.known	chr2	+	6280	12	FSM	ENSG00000124356.17	ENST00000682848.1	6280	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	114.683250450466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	13	True	NA	3	True	AATAAA	-16	NA	73828986	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73847662_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110103.known	chr2	+	1969	11	FSM	ENSG00000124356.17	ENST00000683349.1	1969	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	169.259593524267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCAGGAATTATT	NA	False	NA	-51	True	NA	NA	NA	73828917	73862806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73860533_73860590_73862202
transcript_110104.known	chr2	+	6316	11	FSM	ENSG00000124356.17	ENST00000684585.1	6316	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	117.519360107176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-7	True	NA	3	True	AATAAA	-16	NA	73828966	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110105.known	chr2	+	6370	11	FSM	ENSG00000124356.17	ENST00000394073.6	6370	11	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	71.5782089745196	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	13	True	NA	3	True	AATAAA	-16	NA	73828986	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110106.known	chr2	+	6516	11	FSM	ENSG00000124356.17	ENST00000682784.1	6516	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	123.189122896464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	15	True	NA	3	True	AATAAA	-16	NA	73828988	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110108.known	chr2	+	6053	10	FSM	ENSG00000124356.17	ENST00000683149.1	6053	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	148.508136701888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-31	True	NA	3	True	AATAAA	-16	NA	73828942	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110109.known	chr2	+	6207	10	FSM	ENSG00000124356.17	ENST00000683434.1	6207	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	153.101112397278	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-7	True	NA	3	True	AATAAA	-16	NA	73828966	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847389_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110110.known	chr2	+	6261	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	112.631925391001	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	16	True	NA	3	True	AATAAA	-16	NA	73828989	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110111.known	chr2	+	6019	9	FSM	ENSG00000124356.17	ENST00000682851.1	6019	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	128.841411723871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-31	True	NA	3	True	AATAAA	-16	NA	73828942	73867152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_110114.nic	chr2	+	554	5	ISM	ENSG00000124356.17	ENST00000536064.2	1997	13	7	17567	0	-386	5prime_fragment	FALSE	canonical	3	187	junction_1	70.272238472956	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATACAGAATATAATGA	9	True	NA	NA	False	NA	NA	NA	73828982	73845235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166
transcript_110117.known	chr2	+	1778	11	FSM	ENSG00000124356.17	ENST00000684716.1	1778	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	171.353319197499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	9	True	NA	NA	False	NA	NA	NA	73828982	73873601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_110118.known	chr2	+	1501	9	FSM	ENSG00000163017.14	ENST00000345517.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.34877322383367	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTCCTTCTACTGT	0	True	NA	NA	False	ATTAAA	-22	NA	73893007	73919865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73893052_73901275_73901438_73902359_73902489_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_110119.known	chr2	+	1413	8	FSM	ENSG00000163017.14	ENST00000409731.7	1413	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	14.7731140237657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTCCTTCTACTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	73892966	73919865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73893052_73901275_73901438_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_110123.known	chr2	+	1075	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	628.723773475549	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-1	True	NA	17	True	AATAAA	-15	NA	73926879	73958946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_110126.known	chr2	+	1029	6	FSM	ENSG00000114956.20	ENST00000629438.2	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_3	639.592807964567	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTGCTCATTTATT	7224	False	NA	30	True	AATAAA	-28	NA	73926825	73958959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_110132.known	chr2	+	880	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	744.793385778902	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	7224	False	NA	32	True	AATAAA	-30	NA	73926825	73958961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
transcript_110134.known	chr2	+	703	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_2	508.732411653383	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-6	True	NA	17	True	AATAAA	-15	NA	73926874	73958946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
transcript_110136.nnic	chr2	+	635	4	NIC	ENSG00000114956.20	novel	1075	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_1	880.571153033959	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-10	True	NA	17	True	AATAAA	-15	NA	73926870	73958946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_73927053_73957124_73957241_73958145_73958246_73958709
transcript_110137.nnic	chr2	+	548	3	NIC	ENSG00000114956.20	novel	703	4	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	395	junction_1	910.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	7240	False	NA	17	True	AATAAA	-15	NA	73926841	73958946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_73927053_73958145_73958246_73958709
transcript_110138.known	chr2	-	563	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	179	3	8	-3	multi-exon	TRUE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGAGGTTTCTCTTC	8	True	NA	-1	True	AATAAA	-16	NA	73981433	73957969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73958208_73981108
transcript_110139.known	chr2	-	555	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	0	0	0	multi-exon	TRUE	canonical	3	1184	junction_1	216.750240292062	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-14	True	NA	-2	True	ATTAAA	-33	NA	74147912	74135399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
transcript_110140.known	chr2	-	444	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_1	525.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGGGTCATTAGT	-7	True	NA	-17	True	ATTAAA	-18	NA	74147905	74135414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74135659_74145188_74145304_74147820
transcript_110141.known	chr2	+	1644	3	FSM	ENSG00000225439.4	ENST00000533563.2	1644	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTGTCTCAAAAAAAAAA	10	True	NA	14	True	AATACA	-36	NA	74148044	74150033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74148224_74148349_74148479_74148697
transcript_110145.known	chr2	+	1804	2	FSM	ENSG00000225439.4	ENST00000423477.2	1804	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTTTTGCTTATCTCTA	4	True	NA	42	True	NA	NA	NA	74148038	74150061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74148479_74148697
transcript_110149.known	chr2	-	4896	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_2	76.1666593727203	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGGATTTTTGAGT	-28	True	NA	NA	False	AATATA	-20	NA	74178879	74152527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
transcript_11015.nic	chr1	-	1896	18	NIC	ENSG00000174842.17	novel	2006	19	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_7	84.1154668578014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	-1	True	NA	-21	True	AATAAA	-18	NA	92299009	92246491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_110157.known	chr2	+	2463	9	FSM	ENSG00000065911.13	ENST00000489041.2	2463	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	519.757154832908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	-1	True	NA	NA	False	NA	NA	NA	74198612	74215525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_110160.known	chr2	+	2276	8	FSM	ENSG00000065911.13	ENST00000679055.1	2276	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	580.702213896667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	1	True	NA	NA	False	NA	NA	NA	74198614	74215525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74201381_74201480_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_110161.known	chr2	+	4403	8	FSM	ENSG00000065911.13	ENST00000394053.7	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	147.596941509156	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATGTATCATGAAATG	1	True	NA	23	True	AATAAA	-27	NA	74198614	74217565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_110164.known	chr2	+	1396	7	FSM	ENSG00000065911.13	ENST00000470592.5	1396	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	422.25456381982	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGATTTATCTAAG	-1	True	NA	NA	False	NA	NA	NA	74198612	74214741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_110168.known	chr2	-	4202	31	FSM	ENSG00000204843.13	ENST00000409868.5	4202	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	346.901907364796	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTCCTGTGTGGTGTTG	-9	True	NA	-7	True	ATTAAA	-16	NA	74391865	74361157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322_74374341_74376741_74376763_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_11019.known	chr1	-	572	2	FSM	ENSG00000174842.17	ENST00000487911.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGCAAGACTTTAAAGA	-7	True	NA	NA	False	NA	NA	NA	92298987	92297520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_92298030_92298924
transcript_110193.known	chr2	-	4024	28	FSM	ENSG00000204843.13	ENST00000409567.7	4024	28	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_27	214.183343892791	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCCTTTCCCCTGCTGT	3	True	NA	NA	False	NA	NA	NA	74380299	74361498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74380004
transcript_110198.known	chr2	-	4365	28	FSM	ENSG00000204843.13	ENST00000409240.5	4365	28	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_18	108.316522912261	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	-29	True	NA	-6	True	ATTAAA	-17	NA	74392087	74361156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_11021.known	chr1	+	16899	13	FSM	ENSG00000122484.9	ENST00000610020.2	16899	13	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_8	8.86315720020555	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCCAATTCTATTTTC	11	True	NA	3	True	AATAAA	-16	NA	92299058	92402056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444_92324376_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_110227.known	chr2	-	4229	27	FSM	ENSG00000204843.13	ENST00000434055.5	4229	27	0	0	0	0	multi-exon	TRUE	canonical	3	817	junction_17	108.451888550534	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGTGTGGTGTTGAG	-11	True	NA	-5	True	ATTAAA	-18	NA	74391867	74361155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_110239.known	chr2	-	4145	26	FSM	ENSG00000204843.13	ENST00000409438.5	4145	26	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_25	283.178117798675	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	5567	False	NA	-6	True	ATTAAA	-17	NA	74374735	74361156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322
transcript_11028.nic	chr1	+	784	8	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-33	78400	-33	-428	5prime_fragment	FALSE	canonical	3	76	junction_3	5.823947745897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATAATGAAAAAGAAAGCT	-22	True	NA	NA	False	NA	NA	NA	92299025	92323656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444
transcript_110303.known	chr2	-	883	2	FSM	ENSG00000284308.2	ENST00000640331.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGAGCTTCCAACTGTCG	24	True	NA	NA	False	NA	NA	NA	74421591	74415407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74416242_74421542
transcript_110304.known	chr2	+	1046	10	FSM	ENSG00000005448.17	ENST00000480089.5	1046	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	175.95580253133	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGGCTATGACCT	14	True	NA	-78	True	NA	NA	NA	74421758	74425650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74421817_74422119_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_110307.known	chr2	+	1147	10	FSM	ENSG00000005448.17	ENST00000348227.4	1147	10	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	59.5932716394339	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-15	True	NA	27	True	CATAAA	-17	NA	74421729	74425755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_110311.nnic	chr2	+	1145	10	NNC	ENSG00000005448.17	novel	1147	10	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	180.602079476154	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	0	True	NA	27	True	CATAAA	-17	NA	74421709	74425755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_74421795_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_110313.nic	chr2	+	964	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	182.291276190058	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	6282	False	NA	27	True	CATAAA	-17	NA	74421689	74425755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_110317.nnic	chr2	+	1115	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	184.7940999464	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-2	True	NA	27	True	CATAAA	-17	NA	74421707	74425755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_110321.known	chr2	+	1862	7	FSM	ENSG00000005448.17	ENST00000465134.5	1862	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	213.146272154437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-1	True	NA	27	True	CATAAA	-17	NA	74421743	74425755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74425074_74425238_74425416_74425492_74425569
transcript_110323.known	chr2	-	2646	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	141.412418910866	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGCCTCACATCATCC	-47	True	NA	20	True	NA	NA	NA	74440583	74425835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
transcript_110327.known	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_11	107.203136132737	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	1785	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
transcript_110345.known	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	40.7793903545155	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-21	True	NA	21	True	NA	NA	NA	74441937	74425834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_110347.known	chr2	+	623	5	FSM	ENSG00000115274.15	ENST00000409493.3	623	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.1034186369362	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCTCCCGCCCTCACA	14	True	NA	NA	False	NA	NA	NA	74455115	74457400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74455175_74455390_74455599_74455817_74455937_74456102_74456273_74457333
transcript_110348.known	chr2	+	1325	5	FSM	ENSG00000239779.7	ENST00000393972.7	1325	5	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	296.397115370578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGTGGACTAAAGCT	93	False	NA	24	True	ATTAAA	-24	NA	74458399	74460891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458672_74458996_74459099_74459642_74459746_74459872_74460050_74460220
transcript_110351.known	chr2	+	989	5	FSM	ENSG00000239779.7	ENST00000428943.1	989	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	304.386678420722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGGTGACCCCTGCCT	28	False	NA	NA	False	NA	NA	NA	74458471	74460443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458672_74458831_74459118_74459642_74459746_74459872_74460050_74460220
transcript_110353.known	chr2	+	1175	4	FSM	ENSG00000239779.7	ENST00000233615.7	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	58.5396351960694	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	-6	True	NA	14	True	ATTAAA	-14	NA	74458437	74460881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458672_74459642_74459746_74459872_74460050_74460220
transcript_110354.known	chr2	+	765	4	FSM	ENSG00000239779.7	ENST00000470536.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	281.64319428825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTCTGTACCGCAGA	6	True	NA	NA	False	NA	NA	NA	74458449	74460617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458538_74459642_74459746_74459872_74460050_74460220
transcript_110356.known	chr2	+	847	3	FSM	ENSG00000239779.7	ENST00000473467.5	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	69.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCCGGGGCAGGGGT	44	False	NA	NA	False	NA	NA	NA	74458487	74460432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458672_74459642_74459746_74459872
transcript_110358.known	chr2	+	2047	4	FSM	ENSG00000239779.7	ENST00000484744.5	2047	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	294.822357059675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGGATTTGGGTGGA	15	False	NA	16	True	ATTAAA	-16	NA	74458458	74460883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74459563_74459642_74459746_74459872_74460050_74460220
transcript_110363.known	chr2	-	4128	9	FSM	ENSG00000135637.14	ENST00000393965.8	4128	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	5.14174095030078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTTTCCTGCCTTC	-15	True	NA	NA	False	NA	NA	NA	74482998	74472831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481087_74481222_74481373_74481451_74481539_74481816
transcript_110365.known	chr2	-	2835	9	FSM	ENSG00000135637.14	ENST00000290418.4	2835	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	6.98994814000791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	74482996	74474101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481066_74481222_74481373_74481451_74481539_74481816
transcript_110378.nic	chr2	-	3237	8	ISM	ENSG00000135637.14	ENST00000454193.5	2309	11	-702	2096	3	20	5prime_fragment	FALSE	canonical	3	10	junction_5	4.98159879261791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGATTAGGCAGGGCAT	36	False	NA	NA	False	NA	NA	NA	74483244	74474081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481087_74481222_74481373_74481451_74481539_74481816
transcript_110380.nic	chr2	-	3471	8	ISM	ENSG00000135637.14	ENST00000393965.8	4128	9	-335	1270	75	0	intron_retention	FALSE	canonical	3	10	junction_6	5.42104741743151	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74483333	74474101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481087_74481222_74481373_74481451
transcript_11040.nic	chr1	-	738	3	ISM	ENSG00000067208.16	ENST00000684568.2	7795	20	-64	195878	-64	-716	5prime_fragment	FALSE	canonical	3	29	junction_2	3	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAAAGCAAGTTAAGG	-11	True	NA	NA	False	AATGAA	-21	NA	92785172	92704573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_92704745_92736397_92736628_92784835
transcript_11041.known	chr1	-	2536	5	FSM	ENSG00000154511.12	ENST00000370310.5	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	5.04975246918104	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGATGGTTGGTC	8	True	NA	-11	True	AATAAA	-16	NA	92961462	92842166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_92844196_92847182_92847360_92850847_92850956_92876295_92876431_92961375
transcript_110411.known	chr2	-	2433	5	FSM	ENSG00000115275.15	ENST00000452063.7	2433	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	92.2831918607067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-16	True	NA	-122	True	NA	NA	NA	74465396	74461178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895_74464988_74465313
transcript_110413.known	chr2	-	2649	5	FSM	ENSG00000115275.15	ENST00000649075.1	2649	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	95.7454307003734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGTCTATTTTTCTAA	-20	True	NA	-49	True	NA	NA	NA	74465400	74461105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74462774_74462960_74463013_74463189_74463387_74464495_74464723_74464895
transcript_110418.known	chr2	-	1332	4	FSM	ENSG00000115275.15	ENST00000650523.1	1332	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	110.073712675744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACGAGCAGTCCACGCC	7373	False	NA	NA	False	NA	NA	NA	74465294	74462278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463332_74464665_74464723_74464895
transcript_110419.known	chr2	-	2867	4	FSM	ENSG00000115275.15	ENST00000448666.7	2867	4	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_2	3.55902608401044	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGCCAGATTTGCC	-2	True	NA	0	True	AATAAA	-25	NA	74465382	74461056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895
transcript_110423.known	chr2	-	2304	3	FSM	ENSG00000115275.15	ENST00000649854.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAATGTGAATCCAGAGT	7505	False	NA	-61	True	NA	NA	NA	74465162	74461117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463332_74464895
transcript_110424.known	chr2	-	2445	3	FSM	ENSG00000115275.15	ENST00000647753.1	2445	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	111.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAAGACACTCATGCCA	-8	True	NA	NA	False	NA	NA	NA	74465388	74461257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74464895
transcript_110426.known	chr2	-	386	2	FSM	ENSG00000204822.7	ENST00000409710.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTTTCTGGAACAAGA	-20	True	NA	-50	True	AATAAA	-19	NA	74472687	74471985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74472253_74472568
transcript_110427.known	chr2	+	2916	13	FSM	ENSG00000115282.21	ENST00000233623.11	2916	13	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_8	27.1855762410061	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	2	True	NA	10	True	AATAAA	-18	NA	74483080	74494559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_110428.known	chr2	+	2806	12	FSM	ENSG00000115282.21	ENST00000424122.5	2806	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	42.0764750432604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	3	True	NA	10	True	AATAAA	-18	NA	74483081	74494559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74483136_74483321_74483411_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_110429.known	chr2	+	3358	10	FSM	ENSG00000115282.21	ENST00000410003.5	3358	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	30.0850645854569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	8	True	NA	10	True	AATAAA	-18	NA	74483086	74494559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138
transcript_110430.known	chr2	-	496	3	FSM	ENSG00000204822.7	ENST00000258105.8	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	10.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	-13	True	NA	-46	True	AATAAA	-23	NA	74472680	74471981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74472253_74472357_74472471_74472568
transcript_110431.known	chr2	-	574	2	FSM	ENSG00000204822.7	ENST00000468875.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACCACAATGTTTCTGG	3	True	NA	-57	True	AATAAA	-12	NA	74472664	74471992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74472471_74472568
transcript_110432.known	chr2	-	2205	3	FSM	ENSG00000115275.15	ENST00000462443.2	2205	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	115.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTATTTTTCTAAATAA	-30	True	NA	-45	True	NA	NA	NA	74465410	74461101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74465313
transcript_110433.known	chr2	-	1073	2	FSM	ENSG00000179528.16	ENST00000377566.9	1073	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTCTATCCAGACGC	-7	True	NA	1	True	AATAAA	-18	NA	74499603	74497516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74498319_74499332
transcript_110434.known	chr2	-	886	2	FSM	ENSG00000179528.16	ENST00000341396.2	886	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCGCTATGTTGTCCA	5216	False	NA	-64	True	TTTAAA	-22	NA	74502984	74497581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74498319_74502835
transcript_110435.known	chr2	+	2083	1	FSM	ENSG00000257702.4	ENST00000603175.1	2083	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGATTTTTCTTTA	-11	True	NA	11	True	TATAAA	-12	NA	74502594	74504677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74502600_74504700
transcript_110436.known	chr2	-	907	9	FSM	ENSG00000115289.14	ENST00000233630.11	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	7.37288105152931	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-7	True	NA	-3	True	AATAAA	-16	NA	74507695	74505042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507575
transcript_110437.known	chr2	-	1056	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	3.95381500088516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-5	True	NA	-3	True	AATAAA	-16	NA	74507416	74505042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
transcript_110441.known	chr2	+	2171	3	FSM	ENSG00000115297.11	ENST00000233638.8	2171	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGGGAGATCAGCTG	-18	True	NA	NA	False	AATAAA	-14	NA	74514449	74517148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74515207_74515632_74515871_74515972
transcript_110442.known	chr2	-	2584	12	FSM	ENSG00000144045.14	ENST00000404568.4	2584	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31110955471418	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGTTTGGTCCTGCAG	-6	True	NA	-1	True	TATAAA	-21	NA	74526231	74518130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74518603_74519039_74519231_74519555_74519747_74519914_74520035_74522579_74522772_74522855_74523015_74523118_74523219_74523309_74523538_74523922_74524308_74525008_74525203_74525492_74525749_74526135
transcript_110443.known	chr2	-	3689	14	FSM	ENSG00000115318.12	ENST00000264094.8	3689	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_13	61.1170184222726	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTGGCTGAGTATTCA	-1	True	NA	NA	False	AATAAA	-19	NA	74553942	74532257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74536708_74536929_74549368_74549584_74550184_74550349_74552321_74552647_74553875
transcript_110447.known	chr2	-	1458	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_9	69.1563087601002	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-11	True	NA	-25	True	ATTAAA	-19	NA	74529706	74526651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_110451.known	chr2	-	1581	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_2	237.320684808587	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCTCGGTCTCAA	1196	False	NA	-18	True	ATTAAA	-26	NA	74529760	74526644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_110453.known	chr2	-	2398	12	FSM	ENSG00000115318.12	ENST00000393937.6	2398	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	66.0795913780814	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCCAGGAGTCAGT	1746	False	NA	-10	True	TATAAA	-18	NA	74553958	74533129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74550184_74550349_74552321_74552647_74553875
transcript_110459.known	chr2	-	1645	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_2	58.4808515669873	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-2	True	NA	-25	True	ATTAAA	-19	NA	74529697	74526651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_11046.known	chr1	+	1028	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	0	0	0	multi-exon	FALSE	canonical	3	5357	junction_6	445.802463805096	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTTAAGCTCTTAT	-1	True	NA	35	True	AATAAA	-18	NA	92832039	92841924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_110470.known	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	247.871922572929	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	10	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_11048.nic	chr1	+	924	7	ISM	ENSG00000122406.14	ENST00000370321.8	1028	8	-85	1315	-58	3	5prime_fragment	FALSE	canonical	3	5357	junction_6	324.462975117689	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCCCAAGAAAGAAGTTA	NA	False	NA	NA	False	AAGAAA	-39	NA	92831954	92840609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550
transcript_110489.known	chr2	+	1323	9	FSM	ENSG00000115317.12	ENST00000467961.5	1323	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	55.406311689193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCTAAACTTAGGGGAG	-4	True	NA	-65	True	NA	NA	NA	74529774	74533247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74529913_74530460_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_11049.known	chr1	+	896	7	FSM	ENSG00000122406.14	ENST00000645300.1	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	2287.3291132284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGGAGCGGGCTGC	-1	True	NA	-15	True	NA	NA	NA	92832012	92841835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92832118_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_110490.known	chr2	+	1294	9	FSM	ENSG00000115317.12	ENST00000462909.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	53.4741467907624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATTATACCTAG	12	False	NA	-11	True	NA	NA	NA	74529724	74533152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74529913_74530444_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_110511.known	chr2	+	1785	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	13.2526470209247	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	-37	True	NA	7	True	ATTAAA	-19	NA	74529932	74533319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_11052.known	chr1	+	733	4	FSM	ENSG00000122406.14	ENST00000646852.1	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	5895	junction_1	123.348647697852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAGACCTTCTGGAATC	14	False	NA	NA	False	ATTAAA	-23	NA	92832085	92835293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778
transcript_110532.known	chr2	+	1771	7	FSM	ENSG00000115317.12	ENST00000484352.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	14.3032630309777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTTGTGGGCAGTTA	6	True	NA	4	True	ATTAAA	-16	NA	74530168	74533316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531703_74531855_74531926_74532618_74532715_74532819
transcript_11054.known	chr1	+	271	2	FSM	ENSG00000122406.14	ENST00000644549.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	6864	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGTGTTAAGCTCT	1474	False	NA	32	True	AATAAA	-15	NA	92840524	92841921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92840640_92841765
transcript_11056.known	chr1	+	4046	16	FSM	ENSG00000143033.18	ENST00000545708.5	4046	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.102321753693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	-8	True	NA	38	True	ATTAAA	-39	NA	93079234	93139079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110561.known	chr2	+	1955	5	FSM	ENSG00000115325.14	ENST00000409429.5	1955	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.4354497343366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGGTTTAAGAAGTTTA	NA	False	NA	12	True	ATTAAA	-5	NA	74549025	74557536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74549173_74555153_74555454_74555574_74555669_74555893_74556079_74556307
transcript_110569.known	chr2	+	745	3	FSM	ENSG00000115317.12	ENST00000465521.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCTGGTGAGTGAGACA	233	False	NA	NA	False	NA	NA	NA	74530425	74531363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74530513_74530616_74530822_74530910
transcript_110571.known	chr2	+	1918	5	FSM	ENSG00000115325.14	ENST00000233668.10	1918	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	8.64580823289529	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	-17	True	NA	27	True	ATTAAA	-20	NA	74554719	74557551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74555893_74556079_74556307
transcript_110572.known	chr2	+	1722	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	30.2140511829991	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	-6	True	NA	27	True	ATTAAA	-20	NA	74554730	74557551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
transcript_110573.known	chr2	+	1479	7	FSM	ENSG00000115317.12	ENST00000437202.1	1479	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.3070028487502	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAGGGCTGGATC	12	True	NA	29	True	AATAAA	-32	NA	74530045	74533192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531566_74531703_74531855_74531926_74532819
transcript_110574.known	chr2	-	2544	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	14.9549322967374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	-8	True	NA	-1	True	AATAAA	-17	NA	74648330	74557882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_110576.nnic	chr2	-	2360	10	NIC	ENSG00000159374.18	novel	2544	11	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	15.7158408722215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	NA	False	NA	-1	True	AATAAA	-17	NA	74648353	74557882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_74558875_74559697_74559710_74560150_74560292_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_110578.known	chr2	-	2531	10	FSM	ENSG00000159374.18	ENST00000536235.5	2531	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	14.1970262926979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCCTGTGCTTC	-16	True	NA	-10	True	AATAAA	-8	NA	74648338	74557891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74558875_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_110587.known	chr2	+	6075	14	FSM	ENSG00000135622.13	ENST00000357877.7	6075	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	6.91024451737714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTACCTATGAGTTT	-8	True	NA	NA	False	AATAAA	-13	NA	74654246	74683841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74654522_74656533_74656686_74657564_74657625_74657852_74657952_74662731_74662826_74673456_74673577_74673676_74673829_74674497_74674677_74674887_74675036_74675161_74675385_74675524_74675635_74675748_74675910_74679275_74679335_74679598
transcript_11059.nic	chr1	+	2207	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	202	junction_3	114.947104072673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	NA	False	NA	50	True	AAAAAG	-19	NA	93079229	93137151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110590.known	chr2	+	6007	13	FSM	ENSG00000135622.13	ENST00000611975.4	6007	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.27661336671716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTTTGTGGAGAAAAAT	NA	False	NA	NA	False	AATAAA	-25	NA	74654227	74683853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74654522_74656533_74656686_74657564_74657625_74662731_74662826_74673456_74673577_74673676_74673829_74674497_74674677_74674887_74675036_74675161_74675385_74675524_74675635_74675748_74675910_74679275_74679335_74679598
transcript_110591.known	chr2	+	2672	12	FSM	ENSG00000135622.13	ENST00000446927.5	2672	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	8.30114997509929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAGTGTTCATAAGA	9	False	NA	-15	True	NA	NA	NA	74654361	74680746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74654522_74656533_74656686_74657564_74657625_74673456_74673577_74673676_74673829_74674497_74674677_74674887_74675036_74675161_74675385_74675524_74675635_74675748_74675910_74679275_74679335_74679598
transcript_110594.known	chr2	+	5626	18	FSM	ENSG00000159399.10	ENST00000290573.7	5626	18	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	26.0327183011173	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCATGAGTGTTTTT	1	True	NA	4	True	AATAAA	-27	NA	74834126	74893359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74834644_74854292_74854456_74867635_74867785_74872299_74872420_74873275_74873372_74873843_74873944_74874265_74874450_74877165_74877322_74878687_74878922_74880264_74880570_74881710_74881860_74882119_74882240_74885493_74885590_74886293_74886394_74886489_74886674_74887902_74888059_74889244_74889479_74890796
transcript_110598.known	chr2	+	602	5	FSM	ENSG00000115350.12	ENST00000233699.8	602	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	163.566500237671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGTGTGTTTTATAAT	136	False	NA	11	True	AATAAA	-18	NA	74958791	74969731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74958893_74959340_74959426_74959705_74959757_74960104_74960147_74969408
transcript_110599.known	chr2	+	1097	4	FSM	ENSG00000115350.12	ENST00000483063.2	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	19.4821855949366	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAGGGTACATGTGCA	-13	True	NA	NA	False	NA	NA	NA	74958642	74970128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74958893_74959340_74959426_74960104_74960147_74969408
transcript_1106.known	chr1	-	444	2	FSM	ENSG00000225285.1	ENST00000434150.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGAAGGCGGCCGCGG	NA	False	NA	NA	False	NA	NA	NA	1431843	1430549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1430955_1431804
transcript_11060.nic	chr1	+	2360	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-5	153	intron_retention	FALSE	canonical	3	202	junction_3	114.947104072673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGGTGTTAGACAATTT	NA	False	NA	3	True	ATTAAA	-16	NA	93079229	93137304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110601.known	chr2	+	528	4	FSM	ENSG00000115350.12	ENST00000465242.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	158.410858213697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTCAGTCCAGTGTGT	350	False	NA	3	True	AATAAA	-10	NA	74959005	74969723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74959092_74959340_74959426_74960104_74960147_74969408
transcript_110602.known	chr2	-	4779	5	FSM	ENSG00000115353.11	ENST00000305249.10	4779	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.08972473588517	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGTGCCTCTGTCTCTTC	-2	True	NA	-2	True	AATAAA	-16	NA	75199520	75046462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75049724_75051250_75051448_75053604_75053756_75120573_75120769_75198545
transcript_110606.known	chr2	-	1828	4	FSM	ENSG00000115363.14	ENST00000393913.8	1828	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGCATGTCCGTCTC	-2	True	NA	NA	False	AATAAA	-17	NA	75560939	75492317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75560679
transcript_110609.nic	chr2	-	1679	3	NIC	ENSG00000115363.14	novel	1747	5	NA	NA	-142	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGAGACAAGAAAATTTT	8636	False	NA	NA	False	AATAAA	-21	NA	75561081	75492485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_75493610_75518055_75518209_75560679
transcript_11061.nic	chr1	+	2622	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-5	415	intron_retention	FALSE	canonical	3	202	junction_3	114.947104072673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	21	True	AATATA	-18	NA	93079229	93137566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110610.known	chr2	-	4367	17	FSM	ENSG00000005436.14	ENST00000321027.8	4367	17	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	27.8780127295688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-17	True	NA	-3	True	ATTAAA	-21	NA	75710915	75662704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
transcript_110616.known	chr2	-	1066	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	19.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	-1	True	NA	NA	False	AATAAA	-20	NA	75710899	75701795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75702424_75706522_75706652_75710590
transcript_110618.known	chr2	+	7825	6	FSM	ENSG00000115364.14	ENST00000393909.7	7825	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_3	19.3142434488126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGGATTTGATTTGC	-9	True	NA	11	True	AATAAA	-20	NA	75646782	75662206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063
transcript_110619.known	chr2	+	693	6	FSM	ENSG00000115364.14	ENST00000358788.10	693	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	332.436219446678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGTAAAATGCT	2	True	NA	NA	False	AATAAA	-30	NA	75646793	75690759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75679774_75679853_75690633
transcript_11062.nic	chr1	+	3303	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-5	-829	intron_retention	FALSE	canonical	3	202	junction_3	114.947104072673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCTTCTGTTTCT	NA	False	NA	13	True	AAAAAG	-20	NA	93079229	93138247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110620.known	chr2	-	3616	3	FSM	ENSG00000176204.14	ENST00000409088.3	3616	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCTAACAAGGCTTGA	-6	True	NA	NA	False	AATAAA	-12	NA	77522376	77516667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_77519865_77521667_77521819_77522108
transcript_110622.nic	chr2	+	2642	12	NIC	ENSG00000066032.19	novel	595	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.6054194355238	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCAAGTATGTTTTCT	NA	False	NA	3	True	AATAAA	-15	NA	80328276	80648779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_80328350_80393210_80393292_80419448_80419602_80544981_80545075_80545906_80546064_80555692_80555894_80574162_80574315_80581705_80581820_80589303_80589486_80604073_80604180_80608183_80608319_80647584
transcript_110623.nic	chr2	+	1375	3	ISM	ENSG00000066032.19	ENST00000629316.2	3167	17	-125	902922	10	973	5prime_fragment	FALSE	canonical	3	45	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTCTTAACTACTTG	-29	True	NA	NA	False	AATAAA	-9	NA	79513009	79745456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_79513208_79651551_79651659_79744386
transcript_110625.known	chr2	-	2126	2	FSM	ENSG00000162951.11	ENST00000409148.1	2126	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACAGACTGGTGTAAC	454	False	NA	NA	False	AATAAA	-14	NA	80304274	80301879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_80303879_80304147
transcript_110626.known	chr2	-	1270	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_8	22.2373559579371	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGGAGGCTTATT	-18	True	NA	-5	True	AATAAA	-19	NA	84459280	84423527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_110627.known	chr2	-	568	6	FSM	ENSG00000163541.12	ENST00000442240.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	150.132474834727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGCCATATTCACAAAA	1	True	NA	NA	False	NA	NA	NA	84459261	84441078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84441105_84441246_84441460_84443283_84443401_84448928_84448948_84449648_84449753_84459172
transcript_110633.known	chr2	+	461	3	FSM	ENSG00000034510.6	ENST00000233143.6	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	20189	junction_2	1013	4639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	1	True	NA	19	True	AATAAA	-16	NA	84905655	84906671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_84905719_84906002_84906118_84906388
transcript_110636.known	chr2	-	1814	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	15.0996688705415	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTTTTGTATAGATT	-17	True	NA	-23	True	AATAAA	-27	NA	84881084	84821665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_110639.known	chr2	+	7500	7	FSM	ENSG00000176407.18	ENST00000409785.9	7500	7	0	0	0	0	multi-exon	FALSE	non_canonical	3	663	junction_5	46.3752807718365	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTTCCATTGCATTC	15	True	NA	6	True	AATAAA	-15	NA	84971160	85059472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_84971468_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_110640.nic	chr2	+	2226	7	NIC	ENSG00000176407.18	novel	625	5	NA	NA	347	-5700	combination_of_known_junctions	FALSE	non_canonical	2	41	junction_1	266.911346080804	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	204	False	NA	23	True	AATAAA	-25	NA	84971507	85053772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_84972241_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_110641.nic	chr2	+	2151	7	NIC	ENSG00000176407.18	novel	625	5	NA	NA	-376	-5700	combination_of_known_junctions	FALSE	non_canonical	2	39	junction_1	267.645702790503	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	284	False	NA	23	True	AATAAA	-25	NA	84971587	85053772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_84972246_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_110649.known	chr2	-	6138	5	FSM	ENSG00000152291.15	ENST00000398263.6	6138	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	76.5453297073048	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-5	True	NA	35	True	AATAAA	-20	NA	85328251	85318026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85322742_85324914_85324999_85326507_85326805_85326978_85327686_85327916
transcript_11065.nic	chr1	+	2036	14	NIC	ENSG00000143033.18	novel	1951	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	130	junction_10	164.237920939581	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	NA	False	NA	50	True	AAAAAG	-19	NA	93079229	93137151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110650.nnic	chr2	-	4349	5	NNC	ENSG00000152291.15	novel	6138	5	NA	NA	0	-1144	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	95.546781735441	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCATTGAAGAAAATACCG	-10	True	NA	NA	False	AATAGA	-42	NA	85327989	85319170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_85322742_85324914_85324999_85326507_85326805_85327361_85327686_85327916
transcript_110654.known	chr2	-	6050	4	FSM	ENSG00000152291.15	ENST00000377386.8	6050	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	39.9694327649962	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-10	True	NA	35	True	AATAAA	-20	NA	85327989	85318026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85322742_85324914_85324999_85326507_85327686_85327916
transcript_110659.known	chr2	-	2235	4	FSM	ENSG00000152291.15	ENST00000409232.7	2235	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.376571027462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACTCAGTAGGAACTTT	5768	False	NA	-14	True	AATAAA	-33	NA	85328024	85321893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85322759_85324914_85324999_85326507_85327686_85327916
transcript_11066.nic	chr1	+	2136	14	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	153	intron_retention	FALSE	canonical	3	130	junction_10	164.237920939581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGGTGTTAGACAATTT	-2	True	NA	3	True	ATTAAA	-16	NA	93079282	93137304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110661.known	chr2	+	2564	15	FSM	ENSG00000115459.18	ENST00000409344.7	2564	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.3791860605323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	-10	True	NA	10	True	AATAAA	-14	NA	85354752	85391748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85354830_85355075_85355171_85355554_85355717_85356601_85356668_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_110662.known	chr2	+	2364	14	FSM	ENSG00000115459.18	ENST00000409013.8	2364	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	14.8782037472795	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	6	True	NA	10	True	AATAAA	-14	NA	85354768	85391748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85354830_85355075_85355171_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_110666.known	chr2	+	2332	13	FSM	ENSG00000115459.18	ENST00000393852.8	2332	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	13.1050774723218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	-6	True	NA	10	True	AATAAA	-14	NA	85354756	85391748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_110672.nic	chr2	+	2268	12	NIC	ENSG00000115459.18	novel	2332	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	14.932354355947	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	NA	False	NA	10	True	AATAAA	-14	NA	85354725	85391748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_85354830_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_110686.known	chr2	-	3141	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_9	9.27146158919941	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGTGGGGTCTGCGCC	2	True	NA	NA	False	AATAAA	-21	NA	85354528	85341954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
transcript_11069.nic	chr1	+	3961	14	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	130	junction_10	164.237920939581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	93079229	93139076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110702.known	chr2	-	1250	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	191.37849512174	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	-12	True	NA	-8	True	AATAAA	-34	NA	85410366	85394752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
transcript_110705.nnic	chr2	-	1421	10	NIC	ENSG00000042493.16	novel	1250	10	NA	NA	-137	0	intron_retention	FALSE	canonical	0	0	junction_9	209.449071566925	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTCCTGCACCACCT	5326	False	NA	-22	True	AATAAA	-20	NA	85414211	85394766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413976
transcript_110727.known	chr2	-	1183	10	FSM	ENSG00000042493.16	ENST00000409670.5	1183	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	209.449071566925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTCAGTGCAGAGGTG	5495	False	NA	-83	True	NA	NA	NA	85414042	85394827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402151_85413976
transcript_110729.known	chr2	-	7556	15	FSM	ENSG00000115486.13	ENST00000233838.9	7556	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	14.315148248892	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	1	True	NA	-18	True	AATAAA	-16	NA	85561493	85544719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85560814_85560986_85561385
transcript_110736.known	chr2	-	2314	14	FSM	ENSG00000115486.13	ENST00000430215.7	2314	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_13	14.251336488764	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGCGGGGTTCTA	1	True	NA	10	True	NA	NA	NA	85561532	85549829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85561385
transcript_110757.known	chr2	+	2817	9	FSM	ENSG00000168906.13	ENST00000306434.8	2817	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_8	53.2868123929364	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTACTCATTTGT	1	True	NA	NA	False	AATAAA	-21	NA	85539167	85545281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900_85543035_85543669
transcript_110759.nic	chr2	+	4785	8	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	-1334	1	-1334	-1	intron_retention	FALSE	canonical	3	345	junction_2	21.4323806138168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	85537833	85545280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900
transcript_110764.known	chr2	-	684	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-27	0	-15	0	multi-exon	FALSE	canonical	3	136	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	281	False	NA	-9	True	ATTAAA	-18	NA	85561547	85558724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85559076_85560814_85560986_85561385
transcript_110765.known	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	1	True	NA	NA	False	NA	NA	NA	85561493	85558583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85559076_85561385
transcript_110768.known	chr2	+	679	3	FSM	ENSG00000118640.11	ENST00000263864.10	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	24	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	3	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85577650_85579008_85579168_85581575
transcript_11077.nic	chr1	+	1501	12	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-5	2	intron_retention	FALSE	canonical	3	202	junction_3	117.128734714705	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGTCGTCCACCTGG	NA	False	NA	NA	False	AAAAAG	-12	NA	93079229	93133742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702
transcript_110775.nnic	chr2	+	718	3	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	679	3	NA	NA	-57	0	multi-exon	FALSE	canonical	3	12	junction_1	21.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577528	85593406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_+_85577650_85591724_85591863_85592947
transcript_110776.known	chr2	+	660	3	FSM	ENSG00000168899.5	ENST00000306384.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	11.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	-1	True	NA	24	True	ATTAAA	-15	NA	85584430	85593406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85584494_85591724_85591863_85592947
transcript_110779.known	chr2	+	685	5	FSM	ENSG00000168894.10	ENST00000306368.9	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	132.822014365089	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGACTCATGGCAGTG	-4	True	NA	NA	False	NA	NA	NA	85595744	85597708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103_85597179_85597444
transcript_110780.known	chr2	+	535	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	784.85189685698	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	7	True	NA	68	True	ATTAAA	-39	NA	85595755	85597604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
transcript_110781.known	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	892.746449011264	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	68	False	NA	77	True	NA	NA	NA	85595816	85597613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
transcript_110782.nnic	chr2	+	494	4	NIC	ENSG00000168894.10	novel	535	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	192	junction_2	819.220089814426	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	-2	True	NA	68	True	ATTAAA	-39	NA	85595721	85597604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_85595850_85596518_85596650_85597103_85597179_85597444
transcript_110785.known	chr2	+	623	2	FSM	ENSG00000168894.10	ENST00000461845.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	1910	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGTGGCAGTTGGGAG	1	True	NA	NA	False	NA	NA	NA	85595724	85597016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85595850_85596518
transcript_110797.known	chr2	+	2034	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_13	193.270574048145	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	5	True	NA	71	True	ATTAAA	-19	NA	85616168	85649280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
transcript_110798.known	chr2	+	2148	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	305.001127047098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	-22	True	NA	71	True	ATTAAA	-19	NA	85602855	85649280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_1108.known	chr1	+	4492	3	FSM	ENSG00000179403.12	ENST00000476993.2	4492	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	21.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGATAAACCAAGTCAAT	-14	True	NA	14	True	AATAAA	-23	NA	1435689	1442882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1435822_1436926_1437485_1439080
transcript_11080.nic	chr1	+	1261	11	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	-4439	intron_retention	FALSE	canonical	3	202	junction_3	121.825448901287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGCATTTGTTTG	-2	True	NA	NA	False	AATAAA	-1	NA	93079282	93129301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277
transcript_110800.known	chr2	+	2161	13	FSM	ENSG00000168883.20	ENST00000613444.4	2161	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	234.112627216522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTGTTTTATATCTT	-11	True	NA	73	True	ATTAAA	-21	NA	85612102	85649282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85612360_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_110804.known	chr2	+	2183	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_7	63.8880857437441	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTTTTATATCTTT	22	True	NA	74	True	ATTAAA	-22	NA	85616185	85649283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_11081.nic	chr1	+	1408	11	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	-4292	intron_retention	FALSE	canonical	3	202	junction_3	121.825448901287	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGTTGATCTGTGGCT	-2	True	NA	NA	False	ATTAAA	-36	NA	93079282	93129448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277
transcript_110812.known	chr2	+	2033	12	FSM	ENSG00000168883.20	ENST00000409766.7	2033	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	235.096920404056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCCTCTTGTTTTAT	30	True	NA	68	True	ATTAAA	-16	NA	85616193	85649277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85647929_85648017_85648760
transcript_11082.nic	chr1	+	1330	11	NIC	ENSG00000143033.18	novel	1951	14	NA	NA	-5	2	intron_retention	FALSE	canonical	3	130	junction_10	172.713056831266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGTCGTCCACCTGG	NA	False	NA	NA	False	AAAAAG	-12	NA	93079229	93133742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702
transcript_110838.known	chr2	-	1553	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	25.8883000915984	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-2	True	NA	-4	True	ATTAAA	-17	NA	85602698	85598546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_110843.known	chr2	-	1810	7	FSM	ENSG00000168890.14	ENST00000444380.5	1810	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	26.9036346160803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTATATTAAAAGAAT	8	True	NA	-35	True	NA	NA	NA	85602659	85598577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601483_85601883_85602065_85602606
transcript_110845.known	chr2	-	1484	7	FSM	ENSG00000168890.14	ENST00000306353.7	1484	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	36.4356357918392	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTAGCCTGTTCTGG	-2	True	NA	-5	True	ATTAAA	-16	NA	85602698	85598547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_11085.nic	chr1	+	1240	10	NIC	ENSG00000143033.18	novel	1951	14	NA	NA	-5	-6491	intron_retention	FALSE	canonical	3	202	junction_3	127.088576091006	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAAGATATGAGCATGT	NA	False	NA	NA	False	NA	NA	NA	93079229	93127249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231
transcript_110862.known	chr2	-	4274	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	6.94422221866655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGCCAAGAGTTGT	-17	True	NA	0	True	AATAAA	-19	NA	85612066	85605253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
transcript_110867.known	chr2	-	1722	2	FSM	ENSG00000168887.11	ENST00000409734.3	1722	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTGAAACCCCATCT	17	True	NA	NA	False	NA	NA	NA	85612032	85610219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85611787_85611877
transcript_110868.known	chr2	-	1776	7	FSM	ENSG00000168890.14	ENST00000409668.1	1776	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	27.9145521587258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTTTTTTTTATATTAA	-19	True	NA	-41	True	NA	NA	NA	85602416	85598583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883
transcript_110869.known	chr2	+	623	4	FSM	ENSG00000168883.20	ENST00000455732.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	394.903363706447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGTGTGTCTAAGAGG	-12	True	NA	NA	False	NA	NA	NA	85616151	85623778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85616457_85619219_85619290_85621484_85621580_85623625
transcript_110870.known	chr2	+	5658	3	FSM	ENSG00000168874.13	ENST00000306279.4	5658	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTTTTGTTTTCTTCCT	0	True	NA	NA	False	AATAAA	-23	NA	85753990	85791383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85754958_85763990_85764183_85786884
transcript_110871.known	chr2	-	2597	8	FSM	ENSG00000115525.18	ENST00000638885.1	2597	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.3836662195948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGCCAGTTTAAAAAGA	70	False	NA	-65	True	AAAAAG	-40	NA	85888939	85839195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847381_85847563_85847860_85848382_85861180_85861293_85863361_85863486_85888823
transcript_110872.known	chr2	-	2064	7	FSM	ENSG00000115525.18	ENST00000638678.1	2064	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.8998602369818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGCCAGTTTAAAAAGA	3	True	NA	-65	True	AAAAAG	-40	NA	85888903	85839195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846425_85847860_85848205_85861180_85861293_85863361_85863486_85888823
transcript_110873.known	chr2	-	2165	7	FSM	ENSG00000115525.18	ENST00000377332.8	2165	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	14.147045235274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAAACTTTTGAGGAA	51	False	NA	-38	True	AAAAAG	-9	NA	85888958	85839168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848085_85861180_85861293_85863361_85863486_85888823
transcript_110874.known	chr2	-	4366	7	FSM	ENSG00000115525.18	ENST00000638572.2	4366	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	8.33499983336666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTGTTTTGGATA	19	True	NA	NA	False	AATAAA	-26	NA	85888990	85837119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85888823
transcript_110878.known	chr2	-	2489	8	FSM	ENSG00000115525.18	ENST00000638227.1	2489	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	15.179201667588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCCAGTTTAAAAAGATG	9	True	NA	-63	True	AAAAAG	-42	NA	85889000	85839193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85870071_85870259_85888823
transcript_11088.known	chr1	+	3845	13	FSM	ENSG00000143033.18	ENST00000540243.5	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	170.289194378922	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	-8	True	NA	38	True	ATTAAA	-39	NA	93079234	93139079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110880.known	chr2	-	12480	34	FSM	ENSG00000068654.17	ENST00000263857.11	12480	34	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_31	18.6051228665083	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTGGTTATTCTGAT	-24	True	NA	-6	True	AATAAA	-19	NA	86105886	86020215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031329_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_110885.known	chr2	-	3156	6	FSM	ENSG00000068654.17	ENST00000684026.1	3156	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	16.4365446490435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGTCTCTACTAAAAAA	-28	True	NA	NA	False	NA	NA	NA	86105890	86086253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_110892.known	chr2	+	6681	24	FSM	ENSG00000132300.19	ENST00000254630.12	6681	24	0	0	0	0	multi-exon	FALSE	canonical	1	179	junction_15	108.59076678696	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGGCTCACACCTGTA	1	True	NA	2	True	AATAAA	-14	NA	86106234	86142157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86106352_86108349_86108403_86108499_86108537_86111112_86111159_86116529_86116599_86117054_86117160_86118920_86119045_86121478_86121595_86123700_86123763_86124994_86125083_86125454_86125516_86125794_86125881_86127160_86127306_86127940_86127992_86130647_86130738_86131077_86131107_86132317_86132425_86133177_86133257_86133345_86133437_86134291_86134378_86134838_86134988_86136520_86136563_86136981_86137141_86137468
transcript_1109.known	chr1	+	2147	3	FSM	ENSG00000179403.12	ENST00000338660.5	2147	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	121.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCAGTCTCGCTAGGA	10	False	NA	15	True	AGTAAA	-15	NA	1435522	1440765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1435822_1437321_1437485_1439080
transcript_110917.known	chr2	-	2670	15	FSM	ENSG00000132305.22	ENST00000449247.6	2670	15	0	0	0	0	multi-exon	FALSE	canonical	1	131	junction_5	186.410686060513	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	28	False	NA	-7	True	AATAAA	-20	NA	86195472	86143931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_110918.known	chr2	-	2627	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_10	208.588746834824	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATCTTATCCCTTTT	32	True	NA	-11	True	AATAAA	-16	NA	86195403	86143935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_110922.known	chr2	-	1431	10	FSM	ENSG00000132305.22	ENST00000474969.5	1431	10	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_6	130.175949306229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATTCCATAATCCGTG	0	True	NA	NA	False	NA	NA	NA	86195435	86158375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_11093.nic	chr1	+	1971	8	NIC	ENSG00000143033.18	novel	1937	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	202	junction_3	142.579158107104	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGCGAAACTCTGT	NA	False	NA	NA	False	NA	NA	NA	93079229	93120274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_110931.known	chr2	-	631	4	FSM	ENSG00000132305.22	ENST00000486633.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	87.7812938817579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTCAAGCGATTCTC	-15	True	NA	NA	False	NA	NA	NA	86195450	86173507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86173762_86179432_86179623_86181298_86181373_86195337
transcript_110932.known	chr2	+	1061	5	FSM	ENSG00000132313.15	ENST00000254644.12	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	116.983706130384	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGATGTTCGATTAT	4194	False	NA	22	True	AATAAA	-22	NA	86199354	86212838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86212425
transcript_110935.known	chr2	+	651	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	103.588126732749	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTGCCGATGATTT	-8	True	NA	-33	True	NA	NA	NA	86199462	86213738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
transcript_110936.known	chr2	+	3723	4	FSM	ENSG00000132313.15	ENST00000337109.9	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	8.17856276425687	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	-14	True	NA	19	True	AATAAA	-15	NA	86199456	86213790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479
transcript_110938.known	chr2	-	3857	7	FSM	ENSG00000068615.20	ENST00000165698.9	3857	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	3.33749739908346	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTAATGTTGGGCT	17	True	NA	NA	False	AATAAA	-26	NA	86337654	86213992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86217111_86232624_86232803_86251956_86252071_86254693_86254815_86263964_86264042_86282169_86282243_86337478
transcript_110941.known	chr2	+	4667	26	FSM	ENSG00000115548.17	ENST00000312912.10	4667	26	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_5	14.0089114495024	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	-3	True	NA	15	True	ATTAAA	-15	NA	86441370	86492716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
transcript_110943.known	chr2	-	3138	6	FSM	ENSG00000115561.16	ENST00000263856.9	3138	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	11.8558002682231	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCGTTTGACTG	37	False	86563462	1	True	AATAAA	-28	NA	86563443	86503429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563303
transcript_110946.known	chr2	-	1099	5	FSM	ENSG00000115561.16	ENST00000409225.2	1099	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	53.1666013583716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTGTAGATTGCCCTG	1	True	NA	-3	True	AATAAA	-20	NA	86563479	86505443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86563303
transcript_110949.known	chr2	+	6183	9	FSM	ENSG00000153561.13	ENST00000283632.5	6183	9	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_8	69.3217137699293	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGAACCAGTCTGTA	-7	True	NA	18	True	ATTAAA	-22	NA	86720290	86778041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86720810_86740926_86741070_86751895_86752031_86753457_86753559_86765026_86765194_86765858_86766025_86770022_86770126_86771557_86771713_86773347
transcript_110957.nnic	chr2	-	2194	11	NNC	ENSG00000285793.1	novel	2217	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	170.284732140025	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-4	True	NA	NA	False	AATAAA	-20	NA	87076431	87030674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049779_87052813_87052993_87055657_87055801_87075918
transcript_110958.known	chr2	-	2217	11	FSM	ENSG00000285793.1	ENST00000648819.1	2217	11	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_10	127.579622197277	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-2	True	NA	NA	False	AATAAA	-20	NA	87076429	87030674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
transcript_110965.known	chr2	+	529	2	FSM	ENSG00000222041.12	ENST00000331944.10	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-1	True	NA	6	True	ATTAAA	-23	NA	87455428	87521518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_87455646_87521206
transcript_110970.known	chr2	-	1807	4	FSM	ENSG00000172086.9	ENST00000347055.4	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	4.02768199119819	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-10	True	NA	-2	True	AATAAA	-16	NA	88055783	88027204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_88028586_88034133_88034293_88036942_88037052_88055625
transcript_110976.known	chr2	+	2082	9	FSM	ENSG00000144115.18	ENST00000674334.2	2082	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	8.57321409974112	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	-13	True	NA	23	True	AATAAA	-18	NA	88170345	88186627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88170457_88173138_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185327_88185480_88185897
transcript_110979.known	chr2	+	2052	9	FSM	ENSG00000144115.18	ENST00000343544.8	2052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	11.2465272417756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	39	False	NA	23	True	AATAAA	-18	NA	88170397	88186627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88170457_88173138_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185550_88185725_88185897
transcript_110983.known	chr2	+	1678	8	FSM	ENSG00000144115.18	ENST00000496844.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7.0797209676365	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGGTGGGAGCAGCTC	70	False	NA	NA	False	NA	NA	NA	88170428	88186458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88170457_88173138_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185897
transcript_110991.known	chr2	+	4580	7	FSM	ENSG00000144115.18	ENST00000674282.1	4580	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.98887651569859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	19	True	NA	23	True	AATAAA	-18	NA	88170377	88186627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185897
transcript_110993.known	chr2	-	4346	18	FSM	ENSG00000172071.15	ENST00000652099.1	4346	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	50.7227350184399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTATAGGTAACAGTTTA	880	False	NA	NA	False	NA	NA	NA	88627272	88556934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517_88579641_88583429_88583543_88585840_88586062_88587981_88588105_88588760_88588902_88590442_88590606_88590817_88591053_88593271_88593406_88593912_88594109_88595468_88595664_88613723_88613854_88626966
transcript_110994.known	chr2	-	4536	17	FSM	ENSG00000172071.15	ENST00000303236.9	4536	17	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_10	19.3753024169947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGACTCTTATTTTG	-15	True	NA	-2	True	AATAAA	-17	NA	88627464	88556740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517_88579641_88583429_88583543_88585840_88586062_88587981_88588105_88588760_88588902_88590442_88590606_88590817_88591053_88593271_88593406_88595468_88595664_88613723_88613854_88626966
transcript_110996.known	chr2	+	1614	2	FSM	ENSG00000234028.4	ENST00000453008.3	1616	2	0	2	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTTTGTGTCTTAC	578	False	NA	6	True	AATAAA	-14	NA	88627538	88631819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88628733_88631399
transcript_1110.nnic	chr1	+	1844	2	NIC	ENSG00000179403.12	novel	2147	3	NA	NA	-26	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGTCTCGCTAGGAT	151	False	NA	16	True	AGTAAA	-16	NA	1435663	1440766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1435822_1439080
transcript_11100.known	chr1	+	1951	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	200.591049727472	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	26	False	NA	50	True	AAAAAG	-19	NA	93079310	93137151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_111000.known	chr2	+	1813	9	FSM	ENSG00000153574.9	ENST00000283646.5	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	16.0307322041134	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	0	True	NA	14	True	AATAAA	-15	NA	88691672	88750929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88691984_88698483_88698545_88700008_88700065_88729277_88729338_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_11101.known	chr1	+	4075	15	FSM	ENSG00000143033.18	ENST00000370298.9	4075	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	161.764126595056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	-2	True	NA	35	True	ATTAAA	-36	NA	93079282	93139076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_111010.known	chr2	-	622	4	FSM	ENSG00000283196.2	ENST00000636560.1	622	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	41.8807831827438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGACTGAATGCTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	89585608	89562334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_89562685_89580557_89580636_89581005_89581141_89585549
transcript_111011.known	chr2	-	1196	3	FSM	ENSG00000283196.2	ENST00000636531.1	1196	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	40	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	NA	False	NA	NA	False	ATTAAA	-13	NA	89585615	89542841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_89543837_89581005_89581141_89585549
transcript_111016.known	chr2	-	1194	3	FSM	ENSG00000143429.11	ENST00000609777.6	1214	3	17	3	7	-3	multi-exon	FALSE	canonical	3	20	junction_1	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	2	True	NA	NA	False	ATTAAA	-13	NA	91659972	91617159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_91618155_91655367_91655503_91659908
transcript_111018.known	chr2	-	349	3	FSM	ENSG00000143429.11	ENST00000608501.5	349	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGAGGTCAGGATGTG	78	False	NA	NA	False	NA	NA	NA	91659929	91628760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_91628954_91655367_91655503_91659908
transcript_111019.known	chr2	-	582	4	FSM	ENSG00000143429.11	ENST00000608531.1	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	43.058100283222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGTTCCAGTCCCCCT	85	False	NA	NA	False	AAGAAA	-39	NA	91659922	91642998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_91643354_91654919_91654998_91655367_91655503_91659908
transcript_11102.known	chr1	+	1937	14	FSM	ENSG00000143033.18	ENST00000471953.5	1937	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	216.225474034171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTGGCTTTTACT	25	False	NA	-12	True	NA	NA	NA	93079309	93137089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_111020.known	chr2	+	1084	4	FSM	ENSG00000172005.11	ENST00000309988.9	1084	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGTTGGGTGTTTTT	-1	True	NA	NA	False	TATAAA	-17	NA	95025707	95053992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95025886_95047958_95048127_95049580_95049707_95053380
transcript_111022.known	chr2	-	3298	12	FSM	ENSG00000144029.12	ENST00000272418.7	3298	12	0	0	0	0	multi-exon	TRUE	canonical	3	502	junction_5	73.6059420885556	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTACTTACTATCTG	0	True	NA	NA	False	AATAAA	-33	NA	95121808	95085368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_111025.known	chr2	-	1359	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	178.646046695694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	9	True	NA	-19	True	AATAAA	-15	NA	95121799	95087207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_111028.known	chr2	-	1672	7	FSM	ENSG00000144029.12	ENST00000475895.5	1672	7	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_2	56.9192898370628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTCGTTGTACTGGTT	-5	True	NA	NA	False	CATAAA	-8	NA	95121813	95103752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_111029.known	chr2	-	2755	5	FSM	ENSG00000144026.12	ENST00000411425.1	2755	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3.26917420765551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGGGTGCAGAGGAT	6328	False	NA	-107	True	NA	NA	NA	95159337	95148302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95150268_95152673_95152770_95153132_95153260_95157350_95157440_95158859
transcript_111030.known	chr2	-	6189	5	FSM	ENSG00000144026.12	ENST00000295208.7	6189	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.64005494464026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTACTGTAGTTATT	4	True	NA	0	True	ATTAAA	-22	NA	95159848	95144999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95150268_95152673_95152770_95153132_95153260_95157350_95157440_95159239
transcript_111031.nic	chr2	-	617	4	ISM	ENSG00000144029.12	ENST00000475895.5	1672	7	-224	6195	-224	5174	5prime_fragment	FALSE	canonical	3	633	junction_2	10.2089285540757	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGAACAGGGGTCAGA	-7	True	NA	NA	False	AAAAAG	-35	NA	95122037	95109947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_95110042_95115065_95115204_95117864_95117946_95121733
transcript_111032.known	chr2	-	5593	3	FSM	ENSG00000144026.12	ENST00000496060.1	5593	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTACACATATACCAACC	9974	False	NA	-13	True	AATAAA	-18	NA	95155691	95147329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95150268_95152673_95152770_95153132
transcript_111033.known	chr2	+	3580	5	FSM	ENSG00000275111.5	ENST00000614034.5	3580	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.35410196624968	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTGATGACTGTCC	4	True	NA	5	True	AATAAA	-17	NA	95165808	95184317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95165861_95176187_95176260_95177482_95177610_95180158_95180273_95181102
transcript_111034.known	chr2	+	3885	4	FSM	ENSG00000275111.5	ENST00000617923.4	3885	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTGATGACTGTCC	12	False	NA	5	True	AATAAA	-17	NA	95165431	95184317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95165861_95177482_95177610_95180158_95180273_95181102
transcript_111035.known	chr2	+	4731	24	FSM	ENSG00000155066.16	ENST00000317620.14	4731	24	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_7	3.19794357364057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAACCATTTTTAAAATA	1	True	NA	9	True	AATAAA	-23	NA	95274448	95291302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95274830_95275460_95275511_95275929_95276133_95276226_95276348_95276593_95276658_95276971_95277062_95277363_95277567_95277929_95278005_95278720_95278785_95278984_95279145_95279844_95279998_95281241_95281366_95281924_95282017_95282141_95282227_95284968_95285116_95285638_95285711_95286478_95286572_95286803_95286858_95287132_95287214_95287395_95287465_95288210_95288301_95288482_95288590_95288932_95289007_95289223
transcript_111036.known	chr2	+	2922	24	FSM	ENSG00000155066.16	ENST00000403131.6	2922	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	3.56680770469455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATTTTTAAAATATTTT	5	True	NA	13	True	AATAAA	-27	NA	95274452	95291306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95274830_95275460_95275511_95275929_95276133_95276226_95276348_95276593_95276658_95276971_95277062_95277363_95277567_95277929_95278005_95278720_95278785_95278984_95279145_95279844_95279998_95281241_95281366_95281924_95282017_95282141_95282227_95284968_95285116_95285638_95285711_95286478_95286572_95286803_95286858_95287132_95287214_95287395_95287465_95288210_95288301_95288482_95288590_95288932_95289007_95291032
transcript_111039.known	chr2	+	3824	24	FSM	ENSG00000155066.16	ENST00000317668.8	3824	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	3.56680770469455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTTTAAAATATTTTCA	5	True	NA	15	True	AATAAA	-29	NA	95274452	95291308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95274830_95275460_95275511_95275929_95276133_95276226_95276348_95276593_95276658_95276971_95277062_95277363_95277567_95277929_95278005_95278720_95278785_95278984_95279145_95279844_95279998_95281241_95281366_95281924_95282017_95282141_95282227_95284968_95285116_95285638_95285711_95286478_95286572_95286803_95286858_95287132_95287214_95287395_95287465_95288210_95288301_95288482_95288590_95288932_95289007_95290132
transcript_111040.known	chr2	+	1366	9	FSM	ENSG00000115042.10	ENST00000447036.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	113.504336370907	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-7	True	NA	-23	True	NA	NA	NA	95402722	95413096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95402873_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_111044.nic	chr2	+	1521	9	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	125.180619506376	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-23	True	NA	NA	NA	95402687	95413096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_95402993_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_111048.known	chr2	+	4775	8	FSM	ENSG00000115042.10	ENST00000233379.9	4775	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	82.102723114749	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTCTGGCTTGCTGT	-22	True	NA	20	True	AATAAA	-30	NA	95402707	95416616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95402873_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_111050.nic	chr2	+	1389	8	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	114.432584199303	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-36	True	NA	-23	True	NA	NA	NA	95402693	95413096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_111052.nnic	chr2	+	1033	7	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	122.51938622112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-23	True	NA	NA	NA	95402678	95413096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_95402873_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_111066.nnic	chr2	+	801	6	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	120.448163124225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-36	True	NA	-23	True	NA	NA	NA	95402693	95413096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_95402873_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_11107.known	chr1	+	4552	28	FSM	ENSG00000122483.18	ENST00000401026.7	4552	28	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.7919808948754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	427	False	NA	NA	False	AATAAA	-21	NA	93180362	93278607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93180883_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
transcript_111073.nnic	chr2	+	638	5	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	161.327307049985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-36	True	NA	-23	True	NA	NA	NA	95402693	95413096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_95402873_95410526_95410587_95412433_95412543_95412676_95412765_95412894
transcript_111091.nnic	chr2	-	2141	10	NIC	ENSG00000174501.15	novel	1907	27	NA	NA	-1037	28010	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	7.19224548119211	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAACAAAAATCTGGGAC	NA	False	NA	NA	False	AATAAA	-2	NA	95992868	95958612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_95958664_95960638_95960668_95962351_95962425_95962518_95962548_95978121_95978190_95980647_95980786_95982255_95982363_95986750_95986925_95987091_95987207_95991511
transcript_111092.nic	chr2	-	1774	4	ISM	ENSG00000174501.15	ENST00000528268.5	1907	27	-1128	55030	-1090	4335	5prime_fragment	FALSE	canonical	3	5	junction_1	8.73053390247253	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATATAAATGCCGTTGA	NA	False	NA	NA	False	ATTAAA	-8	NA	95992921	95982287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_95982363_95986750_95986925_95987091_95987207_95991511
transcript_111109.nnic	chr2	+	1392	6	FSM	ENSG00000231584.9	ENST00000689599.1	1381	6	-16	5	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.2937254872717	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	NA	False	NA	6	True	AGTAAA	-19	NA	96010534	96023380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96019200_96019261_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_111115.nnic	chr2	+	1819	6	FSM	ENSG00000231584.9	ENST00000691870.1	1824	6	0	5	0	0	multi-exon	FALSE	canonical	3	28	junction_1	63.6572069761154	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-14	True	NA	6	True	AGTAAA	-19	NA	96010544	96023380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_111119.nnic	chr2	+	1612	5	FSM	ENSG00000231584.9	ENST00000690531.1	1620	5	3	5	0	0	multi-exon	FALSE	canonical	3	19	junction_1	18.952242611364	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	NA	False	NA	6	True	AGTAAA	-19	NA	96010534	96023380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_11112.nic	chr1	+	962	7	ISM	ENSG00000122483.18	ENST00000690025.1	4752	29	-57	76763	-49	8307	5prime_fragment	FALSE	canonical	3	46	junction_1	10.221165404308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGCTGAAAAACTGGAAAA	731	False	NA	NA	False	AGTAAA	-25	NA	93180666	93201967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891
transcript_111126.known	chr2	+	965	4	FSM	ENSG00000231584.9	ENST00000467292.7	1139	4	25	149	0	-127	multi-exon	FALSE	canonical	3	11	junction_1	22.9540604009158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCTCCCCACCGCCTC	-8	True	NA	NA	False	NA	NA	NA	96010550	96023249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673
transcript_111129.known	chr2	-	3696	1	FSM	ENSG00000274286.2	ENST00000620793.2	3696	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTGTCCTTGTTGC	-1	True	NA	44	True	AATAAA	-17	NA	96116571	96112875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96112900_96116600
transcript_111132.known	chr2	-	2394	9	FSM	ENSG00000188886.4	ENST00000342380.3	2394	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.39194109070751	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACCTCCTGTGTGC	10011	False	NA	-1	True	AATAAA	-20	NA	96138502	96122817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96124272_96129823_96129979_96130063_96130146_96132539_96132722_96133424_96133543_96133964_96134059_96135350_96135413_96137574_96137701_96138381
transcript_111133.known	chr2	-	1685	4	FSM	ENSG00000158050.5	ENST00000288943.5	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	12.4721912892465	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCAGCATCTGGTCTCA	-1	True	NA	-6	True	AATAAA	-24	NA	96145440	96143168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96144038_96144153_96144374_96144760_96144883_96144966
transcript_111134.nic	chr2	-	2072	3	NIC	ENSG00000158050.5	novel	1685	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCAGCATCTGGTCTCA	-1	True	NA	-6	True	AATAAA	-24	NA	96145440	96143168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96144038_96144153_96144883_96144966
transcript_111140.known	chr2	-	3377	8	FSM	ENSG00000084090.14	ENST00000337288.10	3377	8	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_3	108.927049169691	1045	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-3	True	NA	-39	True	AATAAA	-26	NA	96208827	96184858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
transcript_111151.known	chr2	+	1527	3	FSM	ENSG00000204685.8	ENST00000446816.2	1565	3	9	29	9	1	multi-exon	FALSE	canonical	1	1	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATAAATTCCTTTCTTC	19	True	NA	-19	True	NA	NA	NA	96208415	96242594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96240443_96240689_96241876
transcript_111152.known	chr2	+	1739	3	FSM	ENSG00000204685.8	ENST00000432267.3	1739	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCTTCCATGACTAAT	145	False	NA	-9	True	AATAAA	-2	NA	96208944	96242604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96239712_96240689_96241876
transcript_111153.known	chr2	+	3458	2	FSM	ENSG00000204685.8	ENST00000659123.1	3458	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAATAAATTCCTTTCTT	6	True	NA	-20	True	NA	NA	NA	96208402	96242593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96239712
transcript_111161.known	chr2	-	3099	4	FSM	ENSG00000135956.9	ENST00000432959.1	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	56.0138871669835	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACGAATAAGAATGGAAAT	-15	True	NA	-29	True	ATTAAA	-30	NA	96265994	96251659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96254116_96254832_96254998_96265137_96265490_96265868
transcript_111162.known	chr2	-	6271	4	FSM	ENSG00000135956.9	ENST00000258439.8	6271	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	64.3549186586041	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTATTTATTTTTT	-18	True	NA	-13	True	AATAAA	-19	NA	96265997	96248513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96254116_96254832_96254998_96265137_96265513_96265868
transcript_111173.known	chr2	+	3968	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_5	62.9700104988257	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	-34	True	NA	60	True	AATAAA	-30	NA	96266224	96274173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
transcript_111182.nic	chr2	+	2003	6	NIC	ENSG00000144021.3	novel	3968	7	NA	NA	23	-1793	intron_retention	FALSE	canonical	3	624	junction_5	54.3654301923566	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACATTGTTATACCAC	79	False	NA	21	True	AGTAAA	-14	NA	96266181	96271556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96269356_96271110
transcript_111196.known	chr2	-	7194	45	FSM	ENSG00000144028.15	ENST00000323853.10	7194	45	0	0	0	0	multi-exon	TRUE	canonical	3	592	junction_38	143.400107772243	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCCGACTGTCTTCAA	-4	True	NA	-8	True	AATAAA	-17	NA	96305546	96274337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_111197.known	chr2	-	1646	10	FSM	ENSG00000144028.15	ENST00000480615.1	1646	10	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_5	54.0749365735374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCACCACTGCACTCCAGC	4276	False	NA	NA	False	NA	NA	NA	96289855	96284814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798
transcript_111198.known	chr2	+	2064	3	FSM	ENSG00000198885.10	ENST00000439118.3	2064	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	-8	True	NA	33	True	ATTAAA	-39	NA	96325316	96328353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96325566_96325746_96325850_96326641
transcript_111200.known	chr2	+	1947	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	6	True	NA	33	True	ATTAAA	-39	NA	96325330	96328353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96325566_96326641
transcript_111204.known	chr2	+	6030	18	FSM	ENSG00000121152.10	ENST00000240423.9	6030	18	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	34.9319655120188	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGCCTTTTTTTTT	-17	True	NA	5	True	AATAAA	-17	NA	96335765	96377091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_111206.nic	chr2	+	2746	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	40.4136911947691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	9526	False	NA	-11	True	TATAAA	-23	NA	96335740	96373815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_111209.nic	chr2	+	1498	11	ISM	ENSG00000121152.10	ENST00000240423.9	6030	18	-46	16918	-46	721	5prime_fragment	FALSE	canonical	3	116	junction_1	42.4942349031019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	9505	False	NA	NA	False	AAAACA	-5	NA	96335719	96360173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_111210.nic	chr2	+	1444	11	ISM	ENSG00000121152.10	ENST00000435975.5	1852	14	-60	5860	-25	721	5prime_fragment	FALSE	canonical	3	87	junction_1	49.7414314229094	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	9526	False	NA	NA	False	AAAACA	-5	NA	96335740	96360173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_111212.nic	chr2	+	1467	10	ISM	ENSG00000121152.10	ENST00000240423.9	6030	18	-46	17898	-46	-259	5prime_fragment	FALSE	canonical	3	116	junction_1	42.142615011411	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAATTCTAGGTGGAA	9505	False	NA	NA	False	NA	NA	NA	96335719	96359193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044
transcript_111213.nic	chr2	+	1413	10	ISM	ENSG00000121152.10	ENST00000435975.5	1852	14	-60	6840	-25	-259	5prime_fragment	FALSE	canonical	3	87	junction_1	50.48383190637	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAATTCTAGGTGGAA	9526	False	NA	NA	False	NA	NA	NA	96335740	96359193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044
transcript_111214.known	chr2	+	1573	10	FSM	ENSG00000121152.10	ENST00000477409.1	1573	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	69.5812873950716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATCCACATGACTTCAC	18	True	NA	NA	False	NA	NA	NA	96335800	96359452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044
transcript_111219.nnic	chr2	+	2395	7	NNC	ENSG00000196843.17	novel	2181	7	NA	NA	-50	0	intron_retention	FALSE	canonical	1	1	junction_4	10.7806410858642	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	4256	False	NA	15	True	AATAAA	-17	NA	96536692	96552630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550028_96550286_96550573_96550734_96551098
transcript_111220.known	chr2	+	2181	7	FSM	ENSG00000196843.17	ENST00000357485.8	2181	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3.85861230093008	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCCTGAGGTGTGTGT	-1	True	NA	19	True	AATAAA	-21	NA	96536751	96552634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_111225.nic	chr2	+	2618	6	NIC	ENSG00000196843.17	novel	2181	7	NA	NA	-50	0	intron_retention	FALSE	canonical	3	24	junction_2	4.01995024844836	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	4256	False	NA	15	True	AATAAA	-17	NA	96536692	96552630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96550286_96550573_96550734_96551098
transcript_111227.known	chr2	+	2038	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10.6395488626163	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	-1	True	NA	15	True	AATAAA	-17	NA	96536751	96552630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_111229.known	chr2	+	940	5	FSM	ENSG00000196843.17	ENST00000467498.5	940	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11.8822346383161	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAGCACAGAACAGCAG	14	False	NA	NA	False	NA	NA	NA	96536766	96551165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96536831_96547401_96547518_96549752_96550286_96550573_96550734_96551098
transcript_111230.known	chr2	-	5310	23	FSM	ENSG00000114982.19	ENST00000670907.1	5310	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	51.7168866390501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACATTTGGATTGCTTCA	-8	True	NA	-19	True	ATTAAA	-11	NA	96638312	96593175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96595632_96598080_96598161_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96606969_96607048_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
transcript_111237.known	chr2	-	5156	21	FSM	ENSG00000114982.19	ENST00000431828.6	5156	21	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_19	24.0093731696602	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGCTTCAGCTT	-8	True	NA	-15	True	ATTAAA	-15	NA	96638312	96593171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
transcript_111239.known	chr2	-	5253	21	FSM	ENSG00000114982.19	ENST00000354204.10	5253	21	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_19	27.6113654135394	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGCTTCAGCTTCT	-1	True	NA	-13	True	ATTAAA	-17	NA	96638346	96593169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
transcript_111242.known	chr2	-	2717	20	FSM	ENSG00000114982.19	ENST00000444759.5	2717	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	34.4320761360103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTGGTGATGGCTGC	-5	True	NA	NA	False	NA	NA	NA	96638378	96595585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96631311_96631483_96636920_96637186_96638282
transcript_111249.known	chr2	-	1448	12	FSM	ENSG00000114982.19	ENST00000452268.5	1448	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.715052291461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGATTCTCCCAGAG	42	False	96638345	NA	False	NA	NA	NA	96638331	96610725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96634148_96634179_96636920_96637186_96638282
transcript_11125.known	chr1	+	541	5	FSM	ENSG00000122483.18	ENST00000479653.6	541	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	24.5203996704785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAACAGAGTTTGCAGG	47	False	NA	NA	False	NA	NA	NA	93180758	93193660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93180853_93183359_93183496_93186344_93186504_93191999_93192107_93193615
transcript_111253.known	chr2	+	3519	6	FSM	ENSG00000249715.13	ENST00000505256.6	3519	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.01980390271856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	96642736	96654898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96642922_96646400_96646454_96647777_96647887_96649622_96649678_96650179_96650290_96651891
transcript_111254.known	chr2	-	2020	9	FSM	ENSG00000114988.12	ENST00000377079.8	2020	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	80.7355830783428	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTTGTAGTTACGAT	-6	True	NA	NA	False	NA	NA	NA	96740064	96706339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96713106_96713140_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_111257.known	chr2	-	2410	9	FSM	ENSG00000114988.12	ENST00000434524.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	81.9569246616782	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGTAGCCTAAATGAAA	17	True	NA	-50	True	NA	NA	NA	96740041	96705974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737136_96737218_96737948_96738068_96739853
transcript_111259.known	chr2	-	2398	8	FSM	ENSG00000114988.12	ENST00000264963.9	2398	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	12.2790679696825	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-6	True	NA	-4	True	AATGAA	-28	NA	96740064	96705928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_11126.known	chr1	-	2871	5	FSM	ENSG00000223745.8	ENST00000653362.1	2871	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	12.871965661856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGACTCCGTCTCCAAA	-29	True	NA	NA	False	NA	NA	NA	93345846	93336974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345539
transcript_111262.known	chr2	-	1163	7	FSM	ENSG00000114988.12	ENST00000434865.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	70.2869120107008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAATGCTGCTGTGATGTG	-5	True	NA	NA	False	NA	NA	NA	96740063	96707043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96739853
transcript_111263.nic	chr2	-	2328	7	NIC	ENSG00000114988.12	novel	2398	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	69.984323641481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-19	True	NA	-4	True	AATGAA	-28	NA	96740077	96705928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96737948_96738068_96739853
transcript_111264.known	chr2	-	1008	6	FSM	ENSG00000114988.12	ENST00000440610.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	93.1892697685737	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGGGACCCCGCATTCC	-6	True	NA	NA	False	NA	NA	NA	96740064	96707116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96739853
transcript_111269.known	chr2	+	4783	7	FSM	ENSG00000158158.12	ENST00000377075.3	4783	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	9.83192080250175	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGTGAATCTACAACTT	-2	True	NA	14	True	AATAAA	-19	NA	96760901	96811874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96762402_96797011_96797156_96797512_96797648_96799056_96799227_96799551_96799649_96808560_96808743_96809319
transcript_11127.known	chr1	-	2599	5	FSM	ENSG00000223745.8	ENST00000655606.1	2599	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.4171171105366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGAGAATGG	-29	True	NA	NA	False	NA	NA	NA	93345846	93337062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_111277.nic	chr2	-	3204	12	NIC	ENSG00000213337.9	novel	4965	9	NA	NA	-66	-1304	intron_retention	FALSE	canonical	3	20	junction_1	140.007851019532	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTAGCCGTCTTTCCT	7410	False	NA	NA	False	ATTAAA	-15	NA	96858082	96837914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96839645_96839726_96839826_96839996_96840096_96840231_96840331_96840415_96840515_96840786_96840913_96842059_96842186_96842364_96842512_96848268_96848445_96853400_96853605_96854337_96854442_96857887
transcript_11128.known	chr1	+	496	4	FSM	ENSG00000122483.18	ENST00000448243.6	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	8.2192186706253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATAAACTTAGGCAACA	4	True	NA	NA	False	ATTAAA	-16	NA	93180715	93186398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344
transcript_111290.known	chr2	+	4900	8	FSM	ENSG00000168763.16	ENST00000305510.4	4900	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	20.1190335305671	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTCTGTGTCAGGATT	10	True	NA	22	True	AATAAA	-22	NA	96816267	96835382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96817503_96825057_96825202_96826832_96826983_96827730_96827901_96828098_96828196_96828566_96828701_96828995_96829135_96832551
transcript_111291.nic	chr2	-	808	5	ISM	ENSG00000213337.9	ENST00000443120.5	4965	9	-68	5772	-66	5607	5prime_fragment	FALSE	canonical	3	29	junction_1	139.219924938925	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAAGAAGAAAGT	7410	False	NA	NA	False	NA	NA	NA	96858082	96842382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_96842512_96848268_96848445_96853400_96853605_96854337_96854442_96857887
transcript_111296.known	chr2	-	892	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_3	38.1430057663117	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGTAAGTATTAG	2	True	NA	-7	True	ATTAAA	-19	NA	96858016	96847989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
transcript_111307.known	chr2	-	3652	15	FSM	ENSG00000168758.11	ENST00000305476.10	3652	15	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_14	71.9889447294882	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGCTAAAGCCTT	-9	True	NA	-4	True	AATAAA	-37	NA	96870080	96859717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96869875
transcript_111308.nic	chr2	-	4045	15	NIC	ENSG00000168758.11	novel	3652	15	NA	NA	-446	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	97.3806962390391	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATTGCTCTGATGGGG	2064	False	NA	-28	True	AATAAA	-13	NA	96869034	96859741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96868415
transcript_111309.nnic	chr2	-	3816	15	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	504	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_14	85.9332916409287	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATTGCTCTGATGGGG	1522	False	NA	-28	True	AATAAA	-13	NA	96869576	96859741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869186
transcript_11131.known	chr1	-	5789	4	FSM	ENSG00000117500.13	ENST00000370282.8	5789	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	10.8730042868667	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTCTCTCTCAAAATAT	3	True	NA	NA	False	AATAAA	-16	NA	93180413	93149741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93154889_93156299_93156484_93160128_93160227_93180053
transcript_111324.known	chr2	-	1431	9	FSM	ENSG00000144199.12	ENST00000414820.6	1431	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_8	62.3533278983568	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094882	97083582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
transcript_111328.known	chr2	-	1305	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	81.587564078387	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094882	97083582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
transcript_111329.nic	chr2	-	1714	8	NIC	ENSG00000144199.12	novel	1431	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	175	junction_7	66.6026903912067	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094888	97083582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
transcript_111343.known	chr2	+	986	3	FSM	ENSG00000135976.21	ENST00000452478.2	986	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATCAGTGTGAAGTGA	13	False	NA	NA	False	ACTAAA	-10	NA	97113551	97118829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_97113937_97118063_97118179_97118343
transcript_111347.known	chr2	-	1169	15	FSM	ENSG00000196912.13	ENST00000419390.2	1169	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.08828579961646	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAGAAATATCTAGGA	457	False	NA	NA	False	AATATA	-15	NA	97589815	97551311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97584943_97585118_97585283_97585399_97589524
transcript_11135.known	chr1	-	1613	4	FSM	ENSG00000223745.8	ENST00000457387.2	1613	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.8193010820572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATAGTTCTTATTTT	-29	True	NA	NA	False	AAAAAG	-14	NA	93345846	93338130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93339537_93339648_93339680_93340457_93340511_93345723
transcript_111353.known	chr2	+	613	5	FSM	ENSG00000135940.7	ENST00000464949.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2860.55164041833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGGCTGGTCTTATTT	-4	True	NA	38	True	AGTAAA	-30	NA	97646096	97648191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_97646190_97646516_97646667_97647066_97647141_97647343_97647444_97647995
transcript_111354.known	chr2	+	690	4	FSM	ENSG00000135940.7	ENST00000258424.3	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	5484	junction_3	200.893559434399	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGGCGGGCTGAGG	1	True	NA	NA	False	AATAGA	-42	NA	97646061	97648383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_97646190_97647066_97647141_97647343_97647444_97647995
transcript_11136.known	chr1	+	10124	3	FSM	ENSG00000117505.13	ENST00000370272.9	10124	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_2	10	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTTACATATGTCTTT	-30	True	NA	NA	False	TATAAA	-15	NA	93345906	93369493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93346866_93353907_93354072_93360492
transcript_111365.known	chr2	-	2204	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_6	15.0083310198036	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	-59	True	NA	-1	True	NA	NA	NA	97664044	97655938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_111372.nic	chr2	-	2505	10	NIC	ENSG00000115073.8	novel	2204	11	NA	NA	-66	0	intron_retention	FALSE	canonical	3	127	junction_2	9.26296222251837	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	620	False	NA	-1	True	NA	NA	NA	97664110	97655938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_111383.nic	chr2	-	2558	9	NIC	ENSG00000115073.8	novel	2204	11	NA	NA	-13	0	intron_retention	FALSE	canonical	3	127	junction_2	9.80752262296652	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	673	False	NA	-1	True	NA	NA	NA	97664057	97655938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658317_97658426_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_11139.known	chr1	-	750	3	FSM	ENSG00000117500.13	ENST00000370280.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAAGTTTGTTTTATA	882	False	NA	NA	False	TATAAA	-32	NA	93180261	93156039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93156484_93160128_93160227_93180053
transcript_111397.nic	chr2	+	2437	13	ISM	ENSG00000115085.14	ENST00000264972.10	2421	14	225	0	219	0	3prime_fragment	FALSE	canonical	2	4	junction_6	3.33749739908346	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCGCCCTCATCTTTT	-14	True	NA	6	True	AATAAA	-17	NA	97713800	97739860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_97713995_97724015_97724439_97725091_97725253_97732882_97733022_97733124_97733213_97733296_97733344_97733543_97733596_97734519_97734713_97735249_97735457_97737472_97737666_97737756_97737898_97737994_97738108_97739374
transcript_111399.known	chr2	+	2421	14	FSM	ENSG00000115085.14	ENST00000264972.10	2421	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.36532966988113	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCGCCCTCATCTTTT	-5	True	NA	6	True	AATAAA	-17	NA	97713575	97739860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_97713675_97713915_97713995_97724015_97724439_97725091_97725253_97732882_97733022_97733124_97733213_97733296_97733344_97733543_97733596_97734519_97734713_97735249_97735457_97737472_97737666_97737756_97737898_97737994_97738108_97739374
transcript_111400.known	chr2	-	6701	41	FSM	ENSG00000075568.17	ENST00000186436.10	6701	41	0	0	0	0	multi-exon	TRUE	canonical	2	55	junction_29	17.7516020403793	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTGTGGTTTTTT	-9	True	NA	-6	True	AATAAA	-18	NA	97995948	97756335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
transcript_111408.known	chr2	+	9996	26	FSM	ENSG00000040933.16	ENST00000409016.8	9996	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	68.0106344625603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATTACTGAGAATGATG	-21	True	NA	NA	False	ATTAAA	-12	NA	98444853	98594390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548954_98548970_98552785_98552970_98554270_98554490_98555552_98555692_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
transcript_111416.known	chr2	+	6752	26	FSM	ENSG00000040933.16	ENST00000074304.9	6752	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	74.314423902766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGCACACTTTTTAAC	-17	True	NA	4	True	AATATA	-21	NA	98444857	98591033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548954_98548970_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
transcript_111425.known	chr2	+	10096	25	FSM	ENSG00000040933.16	ENST00000409851.8	10096	25	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_16	45.3884277652355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTACTGAGAATGATGAT	-17	True	NA	NA	False	ATTAAA	-14	NA	98444857	98594392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
transcript_111439.nic	chr2	+	1618	4	ISM	ENSG00000040933.16	ENST00000409540.7	3231	26	-131	60055	-35	0	5prime_fragment	FALSE	canonical	3	277	junction_1	1.4142135623731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	98444818	98521766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686
transcript_11144.known	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_14	66.96877127834	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	120	False	NA	20	True	AATAAA	-24	NA	93448281	93554661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
transcript_111440.nic	chr2	+	1798	4	ISM	ENSG00000040933.16	ENST00000409540.7	3231	26	-131	59875	-35	180	5prime_fragment	FALSE	canonical	3	277	junction_1	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATTTGGAAGAAACAGA	NA	False	NA	NA	False	AATAAA	-15	NA	98444818	98521946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686
transcript_111443.known	chr2	-	1770	3	FSM	ENSG00000183513.9	ENST00000328709.8	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_2	61	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAATTCAGTGTTTTT	-24	True	NA	NA	False	AATACA	-25	NA	98608512	98599313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_98600794_98604107_98604192_98608306
transcript_111445.known	chr2	-	770	3	FSM	ENSG00000183513.9	ENST00000483527.5	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAGGATAAAACTTTTTC	-19	True	NA	94	True	NA	NA	NA	98608507	98600352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_98600794_98604107_98604192_98608262
transcript_111447.nic	chr2	+	1159	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	258.943545970932	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-20	True	NA	NA	False	AATAAA	-17	NA	98608584	98618515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618145
transcript_111448.known	chr2	+	1133	6	FSM	ENSG00000115446.12	ENST00000357765.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	28.3224292743402	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-16	True	NA	NA	False	AATAAA	-17	NA	98608588	98618515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_111451.nnic	chr2	+	1239	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	258.874023416796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-9	True	NA	NA	False	AATAAA	-17	NA	98608595	98618515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_98608727_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_111455.known	chr2	+	2172	5	FSM	ENSG00000115446.12	ENST00000409975.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_1	17.5071414000116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-26	True	NA	NA	False	AATAAA	-17	NA	98608578	98618515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_111456.known	chr2	-	3873	10	FSM	ENSG00000196872.12	ENST00000397899.7	3873	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	0.684934889218775	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGTTCTAAGTGTAAAT	-28	True	NA	0	True	AATAAA	-15	NA	98936225	98793845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_98794672_98796119_98796265_98797349_98797538_98821856_98823538_98826974_98827170_98832347_98832513_98832861_98832998_98838118_98838288_98846730_98846811_98935937
transcript_111459.nic	chr2	-	1272	8	NIC	ENSG00000135951.16	novel	2390	17	NA	NA	-118	4066	combination_of_known_junctions	TRUE	canonical	2	4	junction_4	4.43087497693452	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTTTTGGCTATAAACA	NA	False	NA	NA	False	AAAAAG	-5	NA	99141690	99105336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_11146.known	chr1	+	5341	14	FSM	ENSG00000137942.18	ENST00000260506.12	5341	14	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_9	42.3036361692006	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTAGTGTGTGATC	2	True	NA	18	True	AATAAA	-22	NA	93448130	93554659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946
transcript_111461.known	chr2	+	1058	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	15.1079449297381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTCTCTGGTATTA	28	False	NA	NA	False	AAAAAG	-16	NA	99141749	99151047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
transcript_111462.known	chr2	+	1627	4	FSM	ENSG00000273045.7	ENST00000650052.2	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATTTTAAATCGTGC	-15	True	NA	30	True	AATAAA	-38	NA	99141706	99151669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99141938_99142284_99142402_99147401_99147494_99150482
transcript_111475.known	chr2	-	939	7	FSM	ENSG00000158411.11	ENST00000289359.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_4	39.7090110120556	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-20	True	NA	0	True	AATAAA	-19	NA	99181058	99169262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_111476.known	chr2	-	1083	7	FSM	ENSG00000158411.11	ENST00000413710.2	1083	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	157.234873852958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	4	True	NA	0	True	AATAAA	-19	NA	99181034	99169262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173413_99173503_99173914_99174017_99180830
transcript_111477.known	chr2	+	567	6	FSM	ENSG00000185414.20	ENST00000473743.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	222.627042382546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAAGGTTTGTTGT	-1	True	NA	NA	False	NA	NA	NA	99181151	99195178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99181250_99186176_99186255_99186918_99187019_99188176_99188258_99194750_99194898_99195115
transcript_111478.known	chr2	+	4435	6	FSM	ENSG00000185414.20	ENST00000338148.8	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	35.9699874895725	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	-15	True	NA	24	True	AATAAA	-20	NA	99181183	99199561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572
transcript_111483.known	chr2	-	662	6	FSM	ENSG00000158411.11	ENST00000409107.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	107.334989635254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTTAAGACCATGTC	-12	True	NA	-9	True	NA	NA	NA	99181050	99169444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
transcript_111486.nic	chr2	+	587	5	ISM	ENSG00000185414.20	ENST00000338148.8	4435	6	-32	4263	0	120	5prime_fragment	FALSE	canonical	3	396	junction_1	39.2587569849072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTTTTTTTTTA	-1	True	NA	7	True	ACTAAA	-2	NA	99181151	99195298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115
transcript_11149.nic	chr1	+	1327	10	ISM	ENSG00000137942.18	ENST00000260506.12	5341	14	-76	10443	-63	-5098	5prime_fragment	FALSE	canonical	3	521	junction_9	42.3576774564679	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTCCTTTAAGTTTT	-4	True	NA	41	True	NA	NA	NA	93448054	93544216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106
transcript_111491.known	chr2	+	803	4	FSM	ENSG00000144182.17	ENST00000415142.1	803	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8884444373331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGATATGGGTAATAT	-3	True	NA	NA	False	TATAAA	-35	NA	99155073	99162275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99155369_99155481_99155545_99156300_99156427_99161956
transcript_111492.known	chr2	+	562	4	FSM	ENSG00000185414.20	ENST00000409145.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	37.3660570869101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTTTGTTGTTGTTGT	-13	True	NA	NA	False	NA	NA	NA	99181185	99195089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750
transcript_111494.known	chr2	+	1424	3	FSM	ENSG00000144182.17	ENST00000393473.6	1424	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTCTTTTAGTAACG	NA	False	NA	41	True	AATAAA	-37	NA	99154954	99163157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99155052_99156300_99156427_99161956
transcript_111497.nic	chr2	-	604	3	ISM	ENSG00000158411.11	ENST00000409107.1	662	6	-261	2181	-253	-1091	5prime_fragment	FALSE	canonical	3	360	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAGAAGAGAATGCA	NA	False	NA	NA	False	NA	NA	NA	99181311	99171625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99171647_99173914_99174017_99180830
transcript_111498.known	chr2	+	482	2	FSM	ENSG00000144182.17	ENST00000449211.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGCTGTCCAACCC	-21	True	NA	NA	False	AAAAAG	-38	NA	99154976	99162363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99155052_99161956
transcript_111500.nic	chr2	-	579	2	ISM	ENSG00000158411.11	ENST00000409107.1	662	6	-261	4474	-253	-572	5prime_fragment	FALSE	canonical	3	360	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTAAAGAGGTTGTTTT	NA	False	NA	NA	False	CATAAA	-23	NA	99181311	99173918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99174017_99180830
transcript_111504.known	chr2	-	4731	23	FSM	ENSG00000135945.10	ENST00000258428.8	4731	23	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_15	27.9019831043785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTGGATATTTGGA	-9	True	NA	-1	True	AATAAA	-16	NA	99490017	99400476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99401353_99402243_99402347_99402643_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429949_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
transcript_111509.nic	chr2	-	3587	20	ISM	ENSG00000135945.10	ENST00000393445.7	4686	23	-190	2565	-128	0	5prime_fragment	TRUE	canonical	3	45	junction_12	26.607436529481	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATTGGTTCACCAAAAA	NA	False	NA	NA	False	AAGAAA	-23	NA	99490163	99403039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429946_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
transcript_11151.nic	chr1	+	693	6	ISM	ENSG00000137942.18	ENST00000271234.13	4227	17	-63	24949	-63	-19602	5prime_fragment	FALSE	canonical	3	593	junction_2	20.5582100388142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGGATAATGATACTAAT	-4	True	NA	54	True	NA	NA	NA	93448054	93529712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651
transcript_111516.nic	chr2	-	1531	6	ISM	ENSG00000135945.10	ENST00000258428.8	4731	23	-146	38163	-128	-66	5prime_fragment	FALSE	canonical	3	128	junction_5	9.97196068985433	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACAGGCAGGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	99490163	99438639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
transcript_111517.nic	chr2	+	1192	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-42	36574	-42	-26999	5prime_fragment	FALSE	canonical	3	577	junction_4	165.5188810982	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAAAGGAAGAAAAAGA	NA	False	NA	0	True	AAAAAG	-25	NA	99337328	99363691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_111518.nic	chr2	+	1303	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	18	36403	0	-26828	5prime_fragment	FALSE	canonical	3	577	junction_4	165.5188810982	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTTCATGAAGTTGG	-9	True	NA	141	True	TATAAA	-38	NA	99337388	99363862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_111520.known	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	81.8882622846522	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	0	True	NA	32	True	CATAAA	-20	NA	99336333	99318981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
transcript_111524.nic	chr2	+	523	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-42	39067	-42	-29492	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACAGAAGGGCAAAAAACA	NA	False	NA	NA	False	GATAAA	-10	NA	99337328	99361198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_111525.nic	chr2	+	694	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	10	38844	-8	-29269	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAGCGTTCAAGAATA	-17	True	NA	-18	True	AGTAAA	-5	NA	99337380	99361421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_111526.nic	chr2	+	834	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-42	38756	-42	-29181	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAAACAAGCCAGGTC	NA	False	NA	70	True	NA	NA	NA	99337328	99361509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_111527.nic	chr2	+	994	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-42	38596	-42	-29021	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGTTAGAAACAGGTAA	NA	False	NA	NA	False	AAAAAG	-43	NA	99337328	99361669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_111528.nic	chr2	+	1145	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-42	38445	-42	-28870	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTTAATACTTTAGAGG	NA	False	NA	NA	False	NA	NA	NA	99337328	99361820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_111530.known	chr2	-	1111	4	FSM	ENSG00000115514.12	ENST00000409434.5	1111	4	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_2	47.3732226286351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	0	True	NA	-3	True	AATAAA	-28	NA	99336333	99321533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99322210_99327534_99327654_99333021_99333243_99336238
transcript_111536.nic	chr2	+	472	3	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-42	39716	-42	-30141	5prime_fragment	FALSE	canonical	3	759	junction_2	140.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGACAGACCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	99337328	99360549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464
transcript_111537.nic	chr2	+	375	2	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-42	39916	-42	-30341	5prime_fragment	FALSE	canonical	3	1040	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACTTTGAGTAAGTAT	NA	False	NA	54	True	AAAAAG	-18	NA	99337328	99360349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235
transcript_111538.known	chr2	+	5741	24	FSM	ENSG00000158417.11	ENST00000289371.11	5741	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	174.055072439633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCCACCGATTGCTGC	-9	True	NA	NA	False	AATAAA	-21	NA	99337388	99401326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492_99368592_99369391_99369482_99371655_99371731_99376346_99376637_99379018_99379127_99379317_99379429_99382158_99382227_99382779_99382922_99389717_99389850_99390218_99390402_99390543_99390706_99392966_99393099_99394266_99394399_99394508_99394586_99394718_99394884_99396759_99396899_99398747_99398910_99399306
transcript_111547.nic	chr2	-	2703	7	NIC	ENSG00000115526.11	novel	2854	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	77.9460283358513	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	245	False	NA	-4	True	AATAAA	-20	NA	100417401	100391859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417257
transcript_111549.known	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	29.3995464817628	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-22	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
transcript_111556.known	chr2	+	1038	6	FSM	ENSG00000115539.14	ENST00000264254.11	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_5	83.9008939165728	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCATTTATATTT	18	True	NA	26	True	ATTAAA	-26	NA	100562992	100576739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_100563074_100566502_100566630_100568930_100569022_100569577_100569722_100571589_100571799_100576353
transcript_11156.known	chr1	-	3217	14	FSM	ENSG00000137936.18	ENST00000370244.5	3217	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	29.7110343497189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATCCAGTCTCTTT	994	False	NA	-7	True	AATACA	-14	NA	93847150	93561790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93706091_93706143_93845566_93845713_93847069
transcript_111562.known	chr2	-	4190	20	FSM	ENSG00000204634.13	ENST00000409318.2	4190	20	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_18	15.4928273995106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTTTTCTTTTACC	14	True	NA	-7	True	AAGAAA	-14	NA	101151382	101007227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101008274_101010928_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090208_101090365_101151126
transcript_111563.known	chr2	-	3627	20	FSM	ENSG00000204634.13	ENST00000376840.8	3627	20	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	8.88679184250861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGGTTCCCTTGATGCC	183	False	NA	NA	False	NA	NA	NA	101151253	101007616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101008274_101010928_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_111570.nic	chr2	-	3175	19	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-234	3341	-105	82	5prime_fragment	FALSE	canonical	3	45	junction_1	8.04328567467577	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGAAAGAATTGCCCAAA	NA	False	NA	70	True	GATAAA	-2	NA	101151487	101010957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_111577.nic	chr2	-	3517	18	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-234	3423	-105	0	5prime_fragment	FALSE	canonical	3	53	junction_9	6.97796829474678	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTTCAAGGTGATGC	NA	False	NA	-12	True	ATTAAA	-15	NA	101151487	101011039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_111578.nnic	chr2	-	3709	18	NNC	ENSG00000204634.13	novel	1093	3	NA	NA	-105	-7515	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	14.9057012849395	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGCTGCTCCAGTCTTT	NA	False	NA	-17	True	AATAAA	-2	NA	101151487	101018554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_101019248_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_111582.nic	chr2	-	2428	10	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-234	25506	-105	-4656	5prime_fragment	FALSE	canonical	3	53	junction_1	7.37864787372622	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCGAGTGCCTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	101151487	101033122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_111584.nic	chr2	-	2267	10	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-234	25667	-105	-4817	5prime_fragment	FALSE	canonical	3	53	junction_1	7.37864787372622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGTGGCGC	NA	False	NA	NA	False	AATACA	-5	NA	101151487	101033283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_111589.nic	chr2	-	1593	6	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-173	32176	-44	-11326	5prime_fragment	FALSE	canonical	3	57	junction_1	7.44580418759451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACCTACAAAAAGCATCA	10	True	NA	NA	False	AAAAAG	-16	NA	101151426	101039792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_111591.known	chr2	+	1291	5	FSM	ENSG00000071082.11	ENST00000264258.8	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	7790	junction_4	2551.43057910655	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	5	True	NA	13	True	ATTAAA	-16	NA	101002288	101007267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101006349
transcript_111592.known	chr2	+	770	5	FSM	ENSG00000071082.11	ENST00000409650.5	770	5	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	5615.70478101369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAATATAATGTCATGT	9	True	NA	73	True	NA	NA	NA	101002292	101018289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017888
transcript_111594.known	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	5577.42634980508	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	-1	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
transcript_111599.nnic	chr2	+	667	5	NNC	ENSG00000071082.11	novel	825	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	5619.90540400815	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTTTGTTCTTTTT	20	False	NA	27	True	AATAAA	-15	NA	101002303	101006419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_101002555_101002701_101002809_101004157_101004284_101005958_101006072_101006349
transcript_111600.known	chr2	+	716	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	9956	junction_1	1790.00856608751	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	9	True	NA	26	True	AATAAA	-14	NA	101002292	101006418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
transcript_111604.known	chr2	+	825	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	7790	junction_3	2806.58416347464	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTTTGTTCTTTTT	9	True	NA	27	True	AATAAA	-15	NA	101002292	101006419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
transcript_111605.known	chr2	+	717	4	FSM	ENSG00000071082.11	ENST00000441435.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6472.95781609064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGGTACACCATGAATT	185	False	NA	35	True	AATAAA	-28	NA	101002738	101024032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101023624
transcript_111606.known	chr2	+	817	5	FSM	ENSG00000071082.11	ENST00000409038.5	817	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5617.78575152168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTTTCAGTTATCAA	9	True	NA	90	True	AATATA	-7	NA	101002292	101018306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017858
transcript_111608.known	chr2	+	2515	7	FSM	ENSG00000158435.8	ENST00000289382.8	2515	7	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_3	47.2349329298655	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTATTTTTTACTTT	-11	True	NA	31	True	ATTAAA	-21	NA	101252885	101270316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101253479_101257790_101257956_101262538_101262692_101264844_101265048_101266676_101266880_101269039_101269137_101269215
transcript_111610.nic	chr2	+	2590	6	ISM	ENSG00000158435.8	ENST00000289382.8	2515	7	-2	6	-2	-6	intron_retention	FALSE	canonical	3	626	junction_3	51.7323883075197	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGATGTATTTTT	-13	True	NA	25	True	ATTAAA	-15	NA	101252883	101270310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_101253479_101257790_101257956_101262538_101262692_101264844_101265048_101266676_101266880_101269039
transcript_111617.known	chr2	-	2953	7	FSM	ENSG00000163162.9	ENST00000295317.4	2953	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	12.4420880705594	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTAGTGGCGGGCGCCTGT	146	False	101308719	NA	False	AATACA	-14	NA	101308701	101275600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101277282_101281858_101282058_101286080_101286178_101288972_101289056_101294013_101294083_101294930_101295182_101308128
transcript_111622.nic	chr2	-	1724	4	ISM	ENSG00000163162.9	ENST00000295317.4	2953	7	-6	12630	-6	477	5prime_fragment	FALSE	canonical	3	100	junction_3	9.28559218478941	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCCTTTATTCT	140	False	101308719	NA	False	NA	NA	NA	101308707	101288230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101289056_101294013_101294083_101294930_101295182_101308128
transcript_111624.known	chr2	-	6292	4	FSM	ENSG00000175874.10	ENST00000324768.6	6292	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	6.0184900284226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTCCTTTCATGTCA	-22	True	NA	NA	False	ATTAAA	-18	NA	101387503	101345549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101351071_101355252_101355367_101383532_101383703_101387016
transcript_111625.known	chr2	-	906	3	FSM	ENSG00000175874.10	ENST00000495455.5	906	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCTCTGGGGACAGGCAA	9328	False	NA	NA	False	NA	NA	NA	101387140	101382078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101382691_101383532_101383703_101387016
transcript_11163.known	chr1	-	3229	12	FSM	ENSG00000137936.18	ENST00000260502.11	3229	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	8.75280356502612	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACCTCTTAGCTACCTC	3	True	NA	43	True	ATTAAA	-22	NA	93681837	93561740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93681597
transcript_111632.nic	chr2	-	2061	8	NIC	ENSG00000135953.11	novel	2990	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	33.6743104409499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTCATTTTTT	-37	True	NA	1	True	ATTAAA	-16	NA	102736899	102715839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_102716042_102718189_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
transcript_111636.known	chr2	-	1183	7	FSM	ENSG00000135953.11	ENST00000411991.5	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	33.4995854037363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAAGCACAACTCGC	-16	True	NA	NA	False	NA	NA	NA	102736878	102718813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
transcript_111638.known	chr2	-	2440	7	FSM	ENSG00000135953.11	ENST00000437075.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	37.6803072646118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCCCAGCTTGCTCTG	-16	True	NA	NA	False	NA	NA	NA	102736878	102717570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732393_102736645
transcript_111643.known	chr2	-	5293	6	FSM	ENSG00000135953.11	ENST00000258436.10	5293	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	12.7373466624725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACTGTCATTTATTC	-26	True	NA	-5	True	AATAAA	-16	NA	102736888	102714629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_111658.known	chr2	+	3198	6	FSM	ENSG00000170417.16	ENST00000409173.5	3198	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	12.6585939187573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCTCCATATTGTATT	-14	True	NA	NA	False	AATAAA	-40	NA	102736910	102817420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_102737014_102758388_102758474_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_111659.known	chr2	+	3112	5	FSM	ENSG00000170417.16	ENST00000409528.5	3112	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	7.49583217528247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCATCTCTCCATATTG	NA	False	NA	NA	False	AATAAA	-36	NA	102736907	102817416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_111661.nnic	chr2	+	1923	11	NNC	ENSG00000135972.9	novel	1414	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	241.879639490388	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCGCTTTATTTTTTT	-2	True	NA	20	True	AATAAA	-26	NA	105038068	105099960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089410_105089996_105092400_105092570_105093529_105093639_105097154_105097325_105099669
transcript_111662.known	chr2	+	1414	11	FSM	ENSG00000135972.9	ENST00000258455.8	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_8	95.2286196476669	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCGCTTTATTTTTTT	-2	True	NA	20	True	AATAAA	-26	NA	105038068	105099960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089919_105089996_105092400_105092570_105093529_105093639_105097154_105097325_105099669
transcript_111666.known	chr2	+	797	2	FSM	ENSG00000226508.1	ENST00000436841.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTTCAAAATTGTCT	17	False	NA	NA	False	NA	NA	NA	105144112	105145222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105144176_105144488
transcript_111667.known	chr2	-	5680	12	FSM	ENSG00000135966.13	ENST00000393359.7	5680	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_11	25.7726871893227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGTTTTCACTCGCAC	-21	True	NA	-27	True	AATAAA	-16	NA	105329735	105264413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105267560_105269271_105269706_105272854_105273015_105273543_105273691_105275559_105275704_105277613_105277672_105280381_105280724_105284315_105284399_105296355_105296511_105298510_105298706_105307613_105308319_105329624
transcript_111674.known	chr2	-	2827	12	FSM	ENSG00000135966.13	ENST00000258449.2	2827	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	45.2232296045712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTACATAGTAATCCAAG	NA	False	NA	NA	False	AAAACA	-25	NA	105308321	105267120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105267159_105267196_105267560_105269271_105269706_105272854_105273015_105273543_105273691_105275559_105275704_105277613_105277672_105280381_105280724_105284315_105284399_105296355_105296511_105298510_105298706_105307613
transcript_111675.known	chr2	-	3449	1	FSM	ENSG00000272994.1	ENST00000610036.1	3449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGTTGATAATGTAAT	8	True	NA	0	True	AATATA	-22	NA	105337475	105334026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105334000_105337500
transcript_111676.known	chr2	+	854	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_3	105.134140506307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	-19	True	NA	79	True	TTTAAA	-43	NA	105337531	105345596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
transcript_111681.known	chr2	+	4587	4	FSM	ENSG00000135974.10	ENST00000258457.7	4587	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	17.2497987105808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAACTTTCTACTTT	-11	True	NA	NA	False	ATTAAA	-15	NA	105337539	105349211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314
transcript_111687.known	chr2	-	1582	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	47.6471405228058	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-4	True	NA	-14	True	AATAAA	-17	NA	105399051	105360825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
transcript_111688.known	chr2	-	1478	7	FSM	ENSG00000115641.19	ENST00000322142.13	1478	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	50.8748464371147	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	1278	False	NA	0	True	AATAAA	-31	NA	105399061	105360811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398969
transcript_111689.known	chr2	-	1531	6	FSM	ENSG00000115641.19	ENST00000393353.7	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	34.6433254754794	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-4	True	NA	-14	True	AATAAA	-17	NA	105399051	105360825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
transcript_11169.nic	chr1	-	2096	7	ISM	ENSG00000137936.18	ENST00000260502.11	3229	12	0	20401	0	159	5prime_fragment	FALSE	canonical	3	64	junction_1	4.7404875511093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACACCAGCATGGGAAT	3	True	NA	NA	False	ATTAAA	-26	NA	93681837	93582141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93681597
transcript_111690.known	chr2	-	1367	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	37.3127324113365	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGACTTGCAATAAAG	-3	True	NA	-49	True	NA	NA	NA	105399050	105360860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
transcript_111692.known	chr2	+	2666	5	FSM	ENSG00000071051.14	ENST00000233154.9	2666	5	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_4	80.9722174575947	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTGTGTATTTATCT	12	True	NA	15	True	AATAAA	-18	NA	105744911	105894272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105745139_105816429_105816614_105855047_105855290_105881327_105882050_105892981
transcript_111693.known	chr2	+	1795	4	FSM	ENSG00000071051.14	ENST00000451463.6	1795	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	185.050143354593	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTGTATTTATCTTT	163	False	NA	17	True	AATAAA	-20	NA	105745062	105894274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105745139_105816429_105816614_105855047_105855290_105892981
transcript_111694.known	chr2	+	753	4	FSM	ENSG00000119147.10	ENST00000238044.8	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAGAATTCATTTGGGT	-9	True	NA	NA	False	AATAAA	-21	NA	106065687	106078155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_106065844_106071843_106071892_106073885_106074044_106077764
transcript_111695.known	chr2	-	1839	15	FSM	ENSG00000115652.15	ENST00000409501.7	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_10	35.7485549872085	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCCAAGGTCTACTT	3	True	NA	NA	False	GATAAA	-42	NA	106194299	106093507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_111701.nnic	chr2	-	1998	14	NIC	ENSG00000115652.15	novel	2053	15	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	100.990186411746	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACTTCCAGTTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	106194365	106093310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_11171.known	chr1	-	5896	7	FSM	ENSG00000067334.14	ENST00000436063.7	5896	7	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_5	53.8052042092584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTCACATAGTTT	-1	True	NA	NA	False	ATTAAA	-17	NA	93879206	93866283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93875644_93875784_93876267_93877863_93879076
transcript_111714.known	chr2	-	7275	6	FSM	ENSG00000144057.16	ENST00000409382.8	6800	6	-479	4	461	4	multi-exon	FALSE	canonical	3	14	junction_5	10.3537432844358	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTCTTGTTTTAATT	669	False	NA	-4	True	AATAAA	-19	NA	106886646	106801603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_106806950_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886092
transcript_111718.known	chr2	+	2850	7	FSM	ENSG00000198075.10	ENST00000272452.7	2850	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	5.8309518948453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTATTGTCTCTCT	-23	True	NA	17	True	ATTAAA	-21	NA	108377953	108388989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108378507_108381761_108381888_108382384_108382483_108383092_108383220_108383415_108383511_108386191_108386373_108387319
transcript_111719.known	chr2	+	1045	5	FSM	ENSG00000198075.10	ENST00000409309.3	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.39116499156263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAATAAATCACTAGGTA	-1	True	NA	NA	False	NA	NA	NA	108378184	108387640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108378507_108381761_108381888_108383415_108383511_108386191_108386373_108387319
transcript_111722.nic	chr2	+	2929	7	FSM	ENSG00000135968.22	ENST00000689620.1	4108	7	99	1080	0	0	multi-exon	FALSE	canonical	3	142	junction_1	11.5998084275369	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTATGGTTTTGCAGAT	-2	True	NA	17	True	AGTAAA	-21	NA	108449205	108472899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826
transcript_111724.known	chr2	+	786	6	FSM	ENSG00000135968.22	ENST00000409821.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	56.0057139941988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTATACACCAAGAAGAG	23	True	NA	NA	False	NA	NA	NA	108449230	108470062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650
transcript_111731.nic	chr2	+	384	5	FSM	ENSG00000135968.22	ENST00000467566.2	764	5	-18	398	10	-389	multi-exon	FALSE	canonical	3	142	junction_1	11.6484977572217	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGAGGTTGAGGTA	-13	True	NA	NA	False	TATAAA	-3	NA	108449194	108469067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979
transcript_111733.known	chr2	+	4461	10	FSM	ENSG00000169756.16	ENST00000544547.5	4461	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	25.9220102863175	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAACCTGTTGTATAT	-4	True	NA	26	True	AATAAA	-15	NA	108534354	108687238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108534595_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_111734.known	chr2	+	1627	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	36.9397240092092	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAATCTTATACAA	-2	True	NA	NA	False	AAGAAA	-29	NA	108621265	108684448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_111738.known	chr2	+	11708	29	FSM	ENSG00000153201.16	ENST00000283195.11	11708	29	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	101.470388764005	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAAGTGGTACTTTAT	-28	True	NA	33	True	AATAAA	-15	NA	108719481	108785809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751527_108751704_108751870_108751995_108752997_108753160_108753425_108753564_108753824_108753972_108754904_108755085_108755175_108755260_108758412_108758549_108762100_108762196_108763236_108768389_108771700_108771872_108772488_108772582_108772867_108773047_108775731_108775937_108777129_108777232_108781268_108781430_108782127_108782402_108782527_108782863_108783595
transcript_111741.known	chr2	+	2375	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_13	20.2338370870506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-5	True	NA	NA	False	AATAAA	-20	NA	108786770	108876578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_111746.known	chr2	+	2250	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	38.9607601106853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-19	True	NA	NA	False	AATAAA	-20	NA	108786756	108876578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_111768.known	chr2	-	3014	11	FSM	ENSG00000186522.15	ENST00000397712.7	3014	11	0	0	0	0	multi-exon	FALSE	canonical	1	157	junction_2	86.6835624556351	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTGTATACTTTAAAT	-35	True	NA	-36	True	AATAAA	-17	NA	109613966	109542798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_111770.known	chr2	-	1605	10	FSM	ENSG00000186522.15	ENST00000415095.5	1605	10	0	0	0	0	multi-exon	FALSE	canonical	1	157	junction_1	87.7599137940313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCACAGTGTGAAAAGG	370	False	NA	NA	False	AATAAA	-3	NA	109613835	109545801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_111771.known	chr2	-	2719	10	FSM	ENSG00000186522.15	ENST00000397714.6	2719	10	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_9	139.558651770324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	4	True	NA	NA	False	AATAAA	-40	NA	109613927	109542985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109613797
transcript_111778.known	chr2	+	4627	1	FSM	ENSG00000198142.5	ENST00000356454.5	4627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTGAATTGTCTAA	13	True	NA	20	True	AATAAA	-16	NA	109614363	109618990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_109614400_109619000
transcript_111779.known	chr2	+	7268	23	FSM	ENSG00000015568.13	ENST00000016946.8	7268	23	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	57.6089158905342	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	1	True	NA	NA	False	ATTAAA	-34	NA	109794304	109857705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_109794538_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109808749_109808896_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
transcript_11178.known	chr1	-	3084	3	FSM	ENSG00000067334.14	ENST00000460191.1	3084	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	380.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAGAAAAAGAAAAATGA	NA	False	NA	NA	False	GATAAA	-34	NA	93879918	93875665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93875784_93876267_93877863_93878547
transcript_111780.known	chr2	-	2522	20	FSM	ENSG00000144061.14	ENST00000445609.7	2522	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	22.02152057468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGTTAAAGTGATCCA	-14	True	NA	NA	False	AATAAA	-20	NA	110205013	110123347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163136_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_111787.known	chr2	-	742	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	13.7679176187089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTGTGGTGACTCAT	0	True	NA	NA	False	CATAAA	-25	NA	110204999	110178040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
transcript_111791.known	chr2	+	735	4	FSM	ENSG00000282304.1	ENST00000568189.5	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTCACTCTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	110245590	110285856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110245794_110279605_110279774_110283678_110283805_110285618
transcript_111794.known	chr2	-	427	2	FSM	ENSG00000175701.11	ENST00000611969.5	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCCTTTTATTTTTTC	-9	True	NA	-21	True	AATAAA	-14	NA	110212547	110211528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110211623_110212214
transcript_111795.known	chr2	-	1528	4	FSM	ENSG00000273471.1	ENST00000488671.1	1528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	110433673	110386410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110387398_110423660_110423874_110424052_110424143_110433435
transcript_111796.known	chr2	-	3762	25	FSM	ENSG00000169679.15	ENST00000302759.11	3762	25	0	0	0	0	multi-exon	FALSE	canonical	2	632	junction_18	130.627412258428	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTGTTCTTCATTGC	-1	True	NA	-34	True	AATAAA	-17	NA	110678063	110637527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_11180.known	chr1	-	499	2	FSM	ENSG00000067334.14	ENST00000528680.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCTACAGAAAAAACTAC	-3	True	NA	NA	False	NA	NA	NA	93879164	93877472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93877884_93879076
transcript_111813.known	chr2	+	2714	19	FSM	ENSG00000153093.20	ENST00000389811.8	2714	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	43.8673998024968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTGTCTTGGTCCATT	0	True	NA	NA	False	AAAACA	-11	NA	110732572	111094344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111093486
transcript_111817.known	chr2	+	4885	19	FSM	ENSG00000153093.20	ENST00000676595.1	4885	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_18	36.5790620133674	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGAGCGGGAGGCTAG	NA	False	NA	NA	False	NA	NA	NA	110732538	111120610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111117615
transcript_111824.known	chr2	+	2699	18	FSM	ENSG00000153093.20	ENST00000439055.6	2699	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	43.3196855449037	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCCCGCTGCTTGCAG	0	True	NA	15	True	AATAAA	-20	NA	110732572	111118548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111117615
transcript_111828.nic	chr2	+	2398	18	NIC	ENSG00000153093.20	novel	4885	19	NA	NA	-6	-314	combination_of_known_junctions	FALSE	canonical	3	30	junction_10	43.197542541919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACACCCTTAGACAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	110732532	111118234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111117615
transcript_11183.known	chr1	-	4883	7	FSM	ENSG00000023909.10	ENST00000370238.8	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	11.1455023315337	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAGCTATTTATGCAT	-16	True	NA	-10	True	AATAAA	-24	NA	93909430	93885198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93904522_93904589_93909037
transcript_111837.nnic	chr2	+	2415	17	NIC	ENSG00000153093.20	novel	4885	19	NA	NA	-65	-314	combination_of_known_splicesites	TRUE	canonical	2	8	junction_15	43.8655616628808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACACCCTTAGACAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	110732473	111118234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111092864_111092967_111117615
transcript_111843.nnic	chr2	+	2049	16	NNC	ENSG00000153093.20	novel	4885	19	NA	NA	14	6576	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	43.7822896716114	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTCTGATGCTTCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	110732552	111002485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111002051
transcript_111849.nnic	chr2	+	2213	16	NIC	ENSG00000153093.20	novel	2699	18	NA	NA	13	-314	combination_of_known_splicesites	FALSE	canonical	2	8	junction_14	50.8234416605391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACACCCTTAGACAAAA	-26	True	NA	NA	False	AAGAAA	-10	NA	110732585	111118234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110987107_110987218_110995892_110996005_111092864_111092967_111117615
transcript_11186.known	chr1	-	3008	6	FSM	ENSG00000023909.10	ENST00000615724.1	3008	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	46.3577393754268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGCGAGACTGCGTCTC	9	True	NA	NA	False	NA	NA	NA	93909456	93887033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93909037
transcript_111861.known	chr2	+	2188	11	FSM	ENSG00000153093.20	ENST00000340561.8	2188	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	46.5076337819933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCTGCTGATAAAT	22	True	NA	11	True	AATAAA	-26	NA	110732633	110888017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110886780
transcript_111863.nic	chr2	+	1815	7	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-48	87860	13	3976	5prime_fragment	FALSE	canonical	3	125	junction_3	22.4845626053867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCGGTCTGTGCCACCT	-26	True	NA	NA	False	AATAAA	-17	NA	110732585	110800157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013
transcript_111868.known	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	NA	False	NA	0	True	ATTAAA	-23	NA	111495086	111429308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_111429621_111494884
transcript_111869.known	chr2	-	419	2	FSM	ENSG00000172965.17	ENST00000674026.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGAATTGTTTGCTT	NA	False	NA	-10	True	ATTAAA	-13	NA	111462731	111429318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_111429621_111462614
transcript_111870.known	chr2	+	720	4	FSM	ENSG00000153094.24	ENST00000337565.9	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	9.42809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTCTGTTTCTTTCTA	-2	True	NA	7	True	AATAAA	-17	NA	111120913	111128844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_111121189_111123732_111123870_111124049_111124140_111128626
transcript_111873.known	chr2	-	7762	48	FSM	ENSG00000153107.13	ENST00000341068.8	7762	48	0	0	0	0	multi-exon	TRUE	canonical	3	271	junction_33	76.1552047499217	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGTTTGCACACATAT	-18	True	NA	-3	True	AATAAA	-18	NA	111884193	111767639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795_111856887_111858305_111858402_111862388_111862599_111863674_111863896_111864805_111864952_111868022_111868097_111872629_111872713_111873307_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
transcript_111882.known	chr2	+	3826	19	FSM	ENSG00000153208.18	ENST00000295408.9	3826	19	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	7.75492674942123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGTGAATGGAAAGAT	-3	True	NA	NA	False	AATAAA	-22	NA	111898606	112029561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350
transcript_111886.known	chr2	+	3600	20	FSM	ENSG00000153208.18	ENST00000421804.6	3600	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	10.3174005186677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATATGTTGAACTTACTT	-2	True	NA	10	True	AATAAA	-14	NA	111898607	112029366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350_112029294_112029323
transcript_111887.known	chr2	+	5162	19	FSM	ENSG00000153214.11	ENST00000283206.9	5162	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	23.4354906546081	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGATTCTTGATAGTAT	0	True	NA	16	True	AATAAA	-18	NA	112055268	112119314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112055757_112059976_112060038_112064161_112064254_112066935_112067068_112074911_112074963_112077191_112077283_112081056_112081119_112081334_112081519_112086004_112086105_112089624_112089719_112091711_112091784_112097043_112097153_112097232_112097292_112098594_112098699_112100621_112100696_112106001_112106076_112107787_112107841_112112898_112112930_112116083
transcript_111891.known	chr2	+	2303	8	FSM	ENSG00000144152.13	ENST00000331203.7	2303	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1.60356745147455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGACTTCTACCTGAGC	-18	True	NA	9	True	AATAAA	-21	NA	112138384	112188218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112138731_112159675_112159836_112165000_112165172_112175713_112175840_112181738_112181877_112182790_112182929_112185200_112185340_112187133
transcript_111892.known	chr2	+	1479	4	FSM	ENSG00000144152.13	ENST00000272559.4	1479	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTGCTCCTTCCTGCCC	63	False	NA	-10	True	AATAAA	-2	NA	112181882	112188199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112182019_112182790_112182929_112185200_112185340_112187133
transcript_111895.known	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	69	junction_2	5.59016994374947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-33	True	NA	-6	True	AATAAA	-32	NA	112255087	112215864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_111899.nic	chr2	-	525	3	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	-94	26786	0	-1729	5prime_fragment	FALSE	canonical	3	84	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGTCAAACTATTTTA	NA	False	NA	NA	False	AGTAAA	-15	NA	112255136	112238314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_112238529_112250190_112250273_112254907
transcript_111900.known	chr2	-	319	2	FSM	ENSG00000144161.14	ENST00000495264.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGGAAATGGATATGAG	-6	True	NA	NA	False	AAAAAG	-7	NA	112255060	112250106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112250273_112254907
transcript_111904.nic	chr2	+	521	2	ISM	ENSG00000188177.14	ENST00000409871.6	11539	12	-27	40147	-27	-12280	5prime_fragment	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGCAAAAGAGAATGAAAA	-5	True	NA	NA	False	AATACA	-8	NA	112275569	112299912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_112276027_112299848
transcript_111905.nic	chr2	+	581	2	ISM	ENSG00000188177.14	ENST00000409871.6	11539	12	-27	40087	-27	-12220	5prime_fragment	FALSE	canonical	3	20	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATAAGAAAGAGAGAGAGAA	-5	True	NA	NA	False	AAGAAA	-5	NA	112275569	112299972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_112276027_112299848
transcript_111906.known	chr2	-	7299	23	FSM	ENSG00000169629.12	ENST00000302558.8	7299	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	60.5354380193812	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	112433645	112368368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112370213_112378052_112378255_112380823_112380964_112388023_112390248_112390974_112391070_112394617_112394754_112397921_112398006_112398098_112398279_112399222_112399370_112399631_112399770_112400035_112400195_112401116_112401241_112401407_112401584_112401666_112401849_112403965_112404176_112406296_112406385_112412430_112412627_112417192_112417339_112417683_112417915_112421959_112422113_112422547_112422660_112424239_112424308_112433381
transcript_111910.known	chr2	+	7527	15	FSM	ENSG00000125630.16	ENST00000263331.10	7527	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_3	39.802830378284	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGCAAATATTTTCT	8	True	NA	21	True	TATAAA	-16	NA	112542464	112579818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846
transcript_111915.known	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	619	junction_1	55.2509426767242	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-23	True	NA	17	True	AATAAA	-21	NA	112584440	112589040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
transcript_111916.nnic	chr2	+	1283	4	NIC	ENSG00000125611.16	novel	523	4	NA	NA	-21	25711	combination_of_known_splicesites	FALSE	canonical	2	13	junction_3	319.83572172115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTGGCCGCCCAGTTT	-16	True	NA	NA	False	AATAAA	-37	NA	112584447	112614986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_112584650_112585973_112586115_112586199_112586366_112614212
transcript_111918.known	chr2	+	748	3	FSM	ENSG00000125611.16	ENST00000454841.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	5	True	NA	17	True	AATAAA	-21	NA	112584468	112589040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112584650_112585973_112586366_112588865
transcript_11192.known	chr1	-	2043	11	FSM	ENSG00000137962.13	ENST00000370217.3	2043	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	5.74543296888929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTGTTATTTTTTTTT	2054	False	NA	-75	True	AGTAAA	-20	NA	94237633	94201894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94202733_94202917_94202999_94203099_94203211_94203929_94203995_94205060_94205199_94205634_94205684_94208831_94208905_94209253_94209351_94220257_94220393_94231406_94231644_94237414
transcript_111922.known	chr2	-	2022	5	FSM	ENSG00000237753.2	ENST00000457336.1	2022	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCGTGTCTTAGAGTTA	623	False	NA	-5	True	AATAAA	-15	NA	112645690	112641831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098
transcript_111927.known	chr2	+	3297	11	FSM	ENSG00000144136.11	ENST00000272542.8	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_6	162.720496557748	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	-1	True	NA	54	True	AATAAA	-23	NA	112645938	112663825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_111928.nic	chr2	+	3277	11	NIC	ENSG00000144136.11	novel	3297	11	NA	NA	-106	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_6	306.736760105469	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	405	False	NA	54	True	AATAAA	-23	NA	112645832	112663825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112657121_112657242_112658950_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_111933.known	chr2	-	4723	9	FSM	ENSG00000169607.13	ENST00000302450.11	4723	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	2.91279504943276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGAATTAGAGTTAACT	16	True	NA	-3	True	AATAAA	-19	NA	112764609	112736348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_111938.nic	chr2	-	1549	5	ISM	ENSG00000169607.13	ENST00000302450.11	4723	9	-65	16047	-10	4379	5prime_fragment	FALSE	canonical	3	47	junction_4	3.53553390593274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAAGGAAATGAATAT	2	True	NA	-46	True	TATAAA	-34	NA	112764674	112752395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_111940.known	chr2	+	11342	17	FSM	ENSG00000125637.16	ENST00000245796.11	11342	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2.99413489175087	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTCTTAGG	-1	True	NA	NA	False	AATAAA	-16	NA	113173970	113209391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113174055_113182345_113183513_113184956_113185074_113185364_113185441_113185876_113186256_113192379_113192590_113193047_113193129_113193257_113193371_113193591_113193651_113193858_113193949_113195726_113195771_113196146_113196308_113197563_113197635_113197746_113197914_113198739_113198885_113199082_113199227_113201157
transcript_111948.known	chr2	+	1740	16	FSM	ENSG00000136682.16	ENST00000358604.7	1740	16	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	504.316285237306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	9	False	NA	NA	False	ATTAAA	-13	NA	113437790	113496119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_111949.known	chr2	+	1827	15	FSM	ENSG00000136682.16	ENST00000259199.9	1827	15	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_6	441.241043153587	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTTTGTCAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	113437690	113496204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_111959.known	chr2	+	880	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	1290	junction_1	162.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	18	False	NA	NA	False	TATAAA	-26	NA	113437838	113444375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113438023_113441350_113441438_113443766
transcript_111961.nnic	chr2	+	2228	11	NNC	ENSG00000146556.15	novel	2050	11	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_1	91.2306965883742	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	113583601	113599034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_113584137_113588549_113588704_113595049_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596579_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_111962.nnic	chr2	+	2003	11	NIC	ENSG00000146556.15	novel	2050	11	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	91.3567184174213	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	113583618	113599034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_113583929_113588549_113588704_113595049_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596579_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_111964.nnic	chr2	+	1938	11	FSM	ENSG00000146556.15	ENST00000692602.1	2050	11	67	45	16	0	multi-exon	TRUE	canonical	2	10	junction_1	92.2382241806508	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	23	False	NA	NA	False	AATAAA	-12	NA	113583670	113599034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113583929_113588549_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596579_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_111981.known	chr2	+	1684	10	FSM	ENSG00000146556.15	ENST00000453662.6	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	95.0730713130111	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	4451	False	NA	NA	False	AATAAA	-12	NA	113588549	113599034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596583_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_111986.nnic	chr2	-	922	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	4	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	NA	False	NA	NA	False	CATAAA	-45	NA	113627117	113611683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_111987.known	chr2	-	738	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	NA	False	NA	NA	False	CATAAA	-45	NA	113627090	113611683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_113612248_113625608_113625730_113627037
transcript_11199.known	chr1	+	3604	23	FSM	ENSG00000117528.14	ENST00000370214.9	3604	23	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_12	14.3190475928723	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGTCTCTTTTTTAA	-11	True	NA	15	True	AATAAA	-18	NA	94418388	94518663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94480463_94480607_94483169_94483240_94487541_94487612_94487693_94487792_94487891_94487984_94489724_94489817_94489902_94489976_94491183_94491248_94498601_94498680_94498782_94498849_94498944_94499035_94499494_94499615_94506537_94506643_94515145_94515203_94517051
transcript_111991.known	chr2	+	1052	10	FSM	ENSG00000144134.19	ENST00000393166.7	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	62.8898704281471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAGTAAATGTATGTG	35	False	NA	12	True	AGTAAA	-16	NA	113627306	113643391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641451_113641780_113641865_113642030_113642146_113643189
transcript_111993.known	chr2	+	2141	9	FSM	ENSG00000144134.19	ENST00000683472.1	2141	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	53.3215481770738	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-6	True	NA	13	True	AGTAAA	-17	NA	113627265	113643392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
transcript_111998.known	chr2	+	1979	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	57.849421393438	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	1	False	NA	13	True	AGTAAA	-17	NA	113627239	113643392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
transcript_112.known	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8281	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8991_13672
transcript_112011.known	chr2	+	2282	10	FSM	ENSG00000144134.19	ENST00000409875.5	2282	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	68.9585669124387	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	39	False	NA	13	True	AGTAAA	-17	NA	113627310	113643392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113627401_113627855_113628011_113628549_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641481_113641780_113641865_113642030
transcript_112014.known	chr2	-	10314	16	FSM	ENSG00000115084.15	ENST00000245680.7	10314	16	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_7	11.0385184191036	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTAGTCTCTAAGATGT	-3	True	NA	53	True	ATTAAA	-26	NA	113756642	113706708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_113715196_113717752_113717851_113719153_113719309_113723103_113723195_113725377_113725538_113729400_113729506_113731583_113731649_113734585_113734674_113735776_113735859_113742691_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
transcript_112018.known	chr2	+	6589	12	FSM	ENSG00000115091.12	ENST00000263238.7	6589	12	0	0	0	0	multi-exon	TRUE	canonical	3	1007	junction_6	77.0678567591869	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCCAAATAAATTCCTG	-13	True	NA	NA	False	NA	NA	NA	113890088	113962596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113890324_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_11202.known	chr1	-	2298	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	10.1666120217111	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACTGCACTTCTTCTC	-3	True	NA	45	True	AATACA	-15	NA	94541759	94529172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_112027.known	chr2	+	2758	26	FSM	ENSG00000175497.17	ENST00000393147.6	2758	26	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	10.0952265947823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACTGTATTTATACAGAA	110	False	NA	NA	False	AAGAAA	-39	NA	115161601	115842345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_115162029_115309238_115309354_115343816_115343913_115499509_115499605_115525897_115525973_115689686_115689740_115689839_115689922_115727815_115727937_115739738_115739894_115746085_115746184_115753173_115753298_115762571_115762611_115768296_115768405_115777207_115777300_115777786_115777835_115780873_115780996_115782351_115782400_115791080_115791180_115791286_115791357_115814792_115814988_115815674_115815730_115836156_115836257_115836506_115836566_115836673_115836747_115840749_115840824_115842210
transcript_112032.nic	chr2	+	1080	3	ISM	ENSG00000175497.17	ENST00000393147.6	2758	26	-197	498188	-197	-155412	5prime_fragment	FALSE	canonical	3	30	junction_1	15	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTGTAGTTAATATTT	-11	True	NA	NA	False	NA	NA	NA	115161404	115344157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_115162029_115309238_115309354_115343816
transcript_112033.known	chr2	-	730	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGGTGTACACAGCCC	-7	True	NA	-5	True	AATAAA	-15	NA	115161343	115144047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_115144369_115144858_115145028_115161103
transcript_112034.known	chr2	+	3753	14	FSM	ENSG00000088205.13	ENST00000263239.7	3753	14	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_7	86.6783484768518	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCGTTTATGGATGCTT	-22	True	NA	22	True	ATTAAA	-18	NA	117814690	117832377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_117814863_117817443_117817729_117819648_117819793_117821160_117821297_117821649_117821751_117821861_117822062_117822146_117822262_117824568_117824709_117824939_117825102_117825446_117825600_117826268_117826383_117828948_117829006_117829288_117829467_117830581
transcript_112038.nic	chr2	+	503	3	ISM	ENSG00000088205.13	ENST00000263239.7	3753	14	-28	12711	-28	-3114	5prime_fragment	FALSE	canonical	3	951	junction_1	40	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAACAAAGGGAAATCT	-50	True	NA	NA	False	AAAAAG	-7	NA	117814662	117819666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_117814863_117817443_117817729_117819648
transcript_112039.nic	chr2	+	464	2	ISM	ENSG00000088205.13	ENST00000263239.7	3753	14	-28	14670	-28	-5073	5prime_fragment	FALSE	canonical	3	951	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAATGATGCTGAGCCT	-50	True	NA	NA	False	AAAAAG	-23	NA	117814662	117817707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_117814863_117817443
transcript_112040.known	chr2	-	6833	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	14.2835185998298	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGACTCTTTCTTGG	-7	True	NA	90	True	GATAAA	-16	NA	118014070	117915480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_112042.nic	chr2	-	1886	22	ISM	ENSG00000125633.11	ENST00000376300.7	6833	24	-86	20017	-23	0	5prime_fragment	FALSE	canonical	3	73	junction_1	13.8067320659212	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCAGATGGCTTCTTTT	6	False	NA	NA	False	NA	NA	NA	118014156	117935497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_112048.known	chr2	+	1500	1	FSM	ENSG00000279227.1	ENST00000623784.1	1500	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCCAAATGTGTTGT	NA	False	NA	4	True	AATAAA	-19	NA	118014173	118015673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118014200_118015700
transcript_112049.known	chr2	+	3185	6	FSM	ENSG00000125629.16	ENST00000485520.5	3185	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	82.4984848345714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	-5	True	NA	4	True	AATAAA	-17	NA	118088473	118110997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118088542_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_112050.known	chr2	+	3562	6	FSM	ENSG00000125629.16	ENST00000245787.9	3562	6	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	36.1020775025482	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	-8	True	NA	4	True	AATAAA	-17	NA	118088470	118110997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118088542_118096418_118096801_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_112056.known	chr2	+	574	5	FSM	ENSG00000125629.16	ENST00000411929.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	83.3677845453506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAGATATACCAACA	-27	True	NA	NA	False	NA	NA	NA	118088451	118108372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_112058.known	chr2	-	480	2	FSM	ENSG00000226856.8	ENST00000661786.2	488	2	8	0	8	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCATTTAGAGGATCAT	8712	False	NA	-6	True	ATTAAA	-25	NA	118186440	118182928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_118183323_118186354
transcript_112059.known	chr2	-	1905	2	FSM	ENSG00000144119.4	ENST00000272520.4	1905	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTGTTGTCTGTATGTC	12	True	NA	-1	True	ATTAAA	-19	NA	119158751	119156242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_119156982_119157585
transcript_112065.known	chr2	+	3915	6	FSM	ENSG00000115107.20	ENST00000393106.6	3915	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	52.0169203240638	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	-12	True	NA	14	True	AATAAA	-19	NA	119223830	119265652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119223889_119239362_119239431_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_112067.known	chr2	+	4259	6	FSM	ENSG00000115107.20	ENST00000393110.7	4259	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	51.9553654592093	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	-9	True	NA	14	True	AATAAA	-19	NA	119223833	119265652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119223889_119230619_119231035_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_112071.known	chr2	+	1871	5	FSM	ENSG00000115107.20	ENST00000393107.2	1871	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	6.49519052838329	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTGTGCTGTGGTGGG	10	True	NA	NA	False	NA	NA	NA	119223852	119263698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119223889_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_112073.known	chr2	-	950	7	FSM	ENSG00000186132.15	ENST00000409877.5	950	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	51.8544972870135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATTAAGCTCTTTAT	5642	False	NA	NA	False	AAAACA	-24	NA	119366682	119302443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119340158_119340362_119366356
transcript_112074.known	chr2	-	685	6	FSM	ENSG00000186132.15	ENST00000334816.12	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	19.6712988894989	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-7	True	NA	-6	True	AATAAA	-17	NA	119366834	119302224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366789
transcript_112077.known	chr2	+	576	5	FSM	ENSG00000155368.18	ENST00000409094.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2826.38872945672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTTCCTTGAGTAG	6	True	NA	-9	True	GGGGCT	-9	NA	119366988	119372481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367061_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_112078.known	chr2	+	714	5	FSM	ENSG00000155368.18	ENST00000311521.8	714	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2834.53298622542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGATCTGAGTTCTT	87	False	NA	56	True	ATTAAA	-24	NA	119367069	119372546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367215_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_112080.known	chr2	+	564	4	FSM	ENSG00000155368.18	ENST00000355857.8	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	139.75534177825	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAGTGATCTGAGTT	-6	True	NA	53	True	ATTAAA	-21	NA	119366976	119372543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367061_119368187_119368306_119370739_119370803_119372244
transcript_112083.known	chr2	+	654	4	FSM	ENSG00000155368.18	ENST00000535617.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2702.58917007788	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	NA	False	NA	60	True	ATTAAA	-28	NA	119366923	119372550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367091_119368187_119368306_119370739_119370803_119372244
transcript_112084.known	chr2	+	740	5	FSM	ENSG00000155368.18	ENST00000535757.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2835.04347409348	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	NA	False	NA	60	True	ATTAAA	-28	NA	119366923	119372550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367091_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_112085.known	chr2	+	1687	2	FSM	ENSG00000171227.7	ENST00000306406.5	1687	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTGCCCAGAAGTAG	-5	True	NA	18	True	ATTAAA	-18	NA	119431853	119438504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119431925_119436888
transcript_112086.known	chr2	+	820	2	FSM	ENSG00000171227.7	ENST00000465296.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAAACGGCTGCCTG	231	False	NA	NA	False	GGGGCT	-13	NA	119432089	119437547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119432251_119436888
transcript_112090.known	chr2	+	2167	18	FSM	ENSG00000163075.13	ENST00000413057.6	2167	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	7.64570123695952	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATTCCTGCATTTTTAA	7	True	NA	54	True	NA	NA	NA	119544448	119631086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119544511_119546084_119546271_119559688_119559776_119559927_119560027_119562013_119562115_119587118_119587223_119601217_119601378_119604671_119604793_119604875_119604988_119605180_119605290_119608501_119608590_119611652_119611743_119615610_119615710_119625582_119625689_119627652_119627787_119629874_119629956_119630569_119630678_119630766
transcript_112093.known	chr2	+	1363	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	0	True	NA	34	True	AATAAA	-16	NA	119679200	119682118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119679277_119680831
transcript_112094.known	chr2	+	1346	2	FSM	ENSG00000144120.13	ENST00000401466.5	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	-4	True	NA	34	True	AATAAA	-16	NA	119679166	119682118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119679226_119680831
transcript_112096.known	chr2	+	791	2	FSM	ENSG00000144120.13	ENST00000445518.1	791	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCAACACTAACCATCC	-10	True	NA	NA	False	GGGGCT	-37	NA	119679190	119681195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119679618_119680831
transcript_112103.known	chr2	+	11090	27	FSM	ENSG00000088179.9	ENST00000263708.7	11090	27	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	29.9858201202506	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAAGTTTTGAAGATT	17	True	NA	9	True	AATAAA	-22	NA	119759921	119984899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
transcript_11211.known	chr1	+	2381	15	FSM	ENSG00000143036.17	ENST00000271227.11	2381	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	4.35245649616632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAGCAGAAATCTCT	-16	True	NA	NA	False	AATAAA	-22	NA	94820356	94895246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_112130.nic	chr2	+	2180	11	ISM	ENSG00000088179.9	ENST00000263708.7	11090	27	-64	68849	-64	-18910	5prime_fragment	FALSE	canonical	3	126	junction_7	23.0228147714392	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCAGGTGTGATGATGT	83	False	NA	NA	False	NA	NA	NA	119759857	119916050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178
transcript_112131.nic	chr2	+	2346	11	ISM	ENSG00000088179.9	ENST00000263708.7	11090	27	-62	68681	-62	-18742	5prime_fragment	FALSE	canonical	3	126	junction_7	23.0228147714392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGGTACAGTGGTGG	85	False	NA	NA	False	NA	NA	NA	119759859	119916218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178
transcript_112134.known	chr2	+	6556	25	FSM	ENSG00000115109.14	ENST00000263713.10	6556	25	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_23	95.7926634716876	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTGCACTGTTTCT	-5	True	NA	25	True	AATAAA	-18	NA	120013076	120179119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120127687_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120167876_120168008_120174840
transcript_112135.known	chr2	+	1777	17	FSM	ENSG00000115109.14	ENST00000331393.8	1777	17	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_16	38.6603802361022	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAAGGAATCAAGGAAG	3	True	NA	NA	False	NA	NA	NA	120013118	120104399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120104059
transcript_112138.known	chr2	-	5922	1	FSM	ENSG00000226479.4	ENST00000426077.3	5922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTTAACTTCTAAGAT	-15	True	NA	-10	True	AATAAA	-16	NA	120223400	120217478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_120217500_120223400
transcript_112141.known	chr2	+	1252	5	FSM	ENSG00000144118.14	ENST00000420510.5	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	116.203216392663	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATGCCCTCCCACTTTT	-7	True	NA	NA	False	NA	NA	NA	120252804	120293665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120252981_120278614_120278779_120285873_120286083_120289579_120289758_120293140
transcript_112142.known	chr2	+	1931	5	FSM	ENSG00000144118.14	ENST00000470417.1	1931	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	149.673812004639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	14	True	NA	-1	True	AAAACA	-30	NA	120252874	120294676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120252981_120278617_120278713_120286066_120286083_120289579_120289758_120293140
transcript_112143.known	chr2	+	2247	5	FSM	ENSG00000144118.14	ENST00000272519.10	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	68.3241355598444	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	-9	True	NA	33	True	AATAAA	-17	NA	120252851	120294710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120252981_120278617_120278779_120285873_120286083_120289579_120289758_120293140
transcript_112145.known	chr2	+	3206	2	FSM	ENSG00000163083.6	ENST00000295228.4	3206	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGCCTCCTGCCTTGCGTG	-19	True	NA	NA	False	AATAAA	-14	NA	120346135	120351803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120346637_120349098
transcript_11215.known	chr1	+	1912	14	FSM	ENSG00000143036.17	ENST00000532427.5	1912	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.24926031125843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAACCCTATTCTTC	0	True	NA	-11	True	TTTAAA	-4	NA	94820649	94895029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94820724_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_112157.known	chr2	-	1686	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_3	70.0541457255267	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGCTTGTGCCTGTA	-2	True	NA	1	True	ATTAAA	-16	NA	121736875	121726944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
transcript_11216.known	chr1	+	2061	14	FSM	ENSG00000143036.17	ENST00000467909.5	2061	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.8985506192864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	17	False	NA	13	True	AATAAA	-16	NA	94820620	94895053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94820724_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_112163.known	chr2	-	1096	4	FSM	ENSG00000155438.12	ENST00000477693.1	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	13.4742552876052	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTTTAGTAGAGA	1	True	NA	NA	False	NA	NA	NA	121736872	121730382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_121731105_121732095_121732205_121735612_121735751_121736745
transcript_112164.known	chr2	+	1411	3	FSM	ENSG00000236859.8	ENST00000414554.7	1414	3	2	1	2	0	multi-exon	FALSE	canonical	1	2	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	4	True	NA	10	True	ACTAAA	-19	NA	121649649	121651535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121649912_121650300_121650382_121650467
transcript_112165.known	chr2	+	1368	2	FSM	ENSG00000236859.8	ENST00000447668.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	-18	True	NA	10	True	ACTAAA	-19	NA	121650081	121651535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121650382_121650467
transcript_112167.known	chr2	+	1182	2	FSM	ENSG00000236859.8	ENST00000413904.6	1182	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	152	False	NA	10	True	ACTAAA	-19	NA	121649797	121651535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121649912_121650467
transcript_112170.known	chr2	+	3302	6	FSM	ENSG00000211460.12	ENST00000389682.8	3302	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	421.778899424805	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	-24	True	NA	18	True	ATTAAA	-29	NA	121755650	121767853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_112172.known	chr2	+	2717	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	513.253543582507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCTTGGAATTCCA	-12	True	NA	3	True	ATTAAA	-13	NA	121755662	121767179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_112173.known	chr2	+	3328	5	FSM	ENSG00000211460.12	ENST00000536142.5	3328	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.690837665344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	NA	False	NA	18	True	ATTAAA	-29	NA	121755544	121767853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121765133
transcript_112174.known	chr2	+	605	5	FSM	ENSG00000211460.12	ENST00000495112.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	456.917593773757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTAGAGGAAGTG	10	True	NA	NA	False	NA	NA	NA	121755684	121765284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_112177.known	chr2	+	2843	6	FSM	ENSG00000211460.12	ENST00000467324.5	2843	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	417.411355858942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGCTGCTGTAAGAA	-16	True	NA	22	True	AATAAA	-23	NA	121755658	121767294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755954_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_112178.known	chr2	+	1018	4	FSM	ENSG00000136732.16	ENST00000259254.9	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2289111041209	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCGAGTCCAACAGTA	2	True	NA	14	True	AATAAA	-17	NA	126656157	126696667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_126656313_126690254_126690312_126693863_126693948_126695945
transcript_112179.known	chr2	+	932	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	97.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTCCGAGTCCAACA	-11	True	NA	11	True	AATAAA	-14	NA	126656183	126696664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_126656313_126693863_126693948_126695945
transcript_112180.known	chr2	+	1341	2	FSM	ENSG00000136732.16	ENST00000484700.2	1341	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTCATCTTGTTTTT	-23	True	NA	NA	False	AATAAA	-16	NA	126656132	126658767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_126656313_126657606
transcript_112181.known	chr2	-	1472	1	FSM	ENSG00000260634.1	ENST00000567613.1	1472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTACTGAATGCCATTTA	5450	False	NA	NA	False	AATAAA	-19	NA	127025723	127024251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127024300_127025700
transcript_112190.known	chr2	-	2143	14	FSM	ENSG00000136717.15	ENST00000409400.1	2143	14	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	40.4009490778439	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGAAAACGTGTGTGT	9	True	NA	-20	True	GATAAA	-3	NA	127107278	127048037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_112191.known	chr2	-	2293	15	FSM	ENSG00000136717.15	ENST00000393040.7	2293	15	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	54.651819993221	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-1	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_112192.known	chr2	-	2487	19	FSM	ENSG00000136717.15	ENST00000316724.10	2487	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	86.5228864321066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACGTGTGTGTATTTGT	-1	True	NA	-14	True	GATAAA	-9	NA	127107154	127048031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127053421_127053446_127053904_127054013_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_112193.known	chr2	-	2074	13	FSM	ENSG00000136717.15	ENST00000348750.8	2074	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	62.2460953706246	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-1	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_112194.known	chr2	-	2272	15	FSM	ENSG00000136717.15	ENST00000393041.7	2272	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	74.3864701325148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-1	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_112196.known	chr2	-	3398	15	FSM	ENSG00000163161.14	ENST00000645233.1	3398	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	85.3994216870922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGAACCAGTCTTCATT	13	True	NA	-22	True	AATAAA	-10	NA	127294139	127257302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127291911_127292847_127293512_127293719_127294053
transcript_112197.known	chr2	-	2345	15	FSM	ENSG00000163161.14	ENST00000644317.1	2345	15	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_13	92.9452329413973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGATGCATCAAGGGC	6	True	NA	NA	False	NA	NA	NA	127294098	127257474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292705_127293512_127293719_127294053
transcript_112198.known	chr2	-	2916	15	FSM	ENSG00000163161.14	ENST00000426778.5	2916	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	94.551708129489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	7	True	NA	-9	True	AATAAA	-23	NA	127294145	127257289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127293856
transcript_112199.known	chr2	-	2718	15	FSM	ENSG00000163161.14	ENST00000285398.7	2718	15	0	0	0	0	multi-exon	FALSE	canonical	1	106	junction_12	61.7180885071758	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	8	True	NA	-9	True	AATAAA	-23	NA	127294144	127257289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_11220.known	chr1	+	2094	14	FSM	ENSG00000143036.17	ENST00000446120.6	2094	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	6.0813031926315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTTTGTCATTATTGT	-31	True	NA	12	True	AATAAA	-15	NA	94820341	94895052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94820479_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_112209.nic	chr2	-	2928	14	NIC	ENSG00000163161.14	novel	2718	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	106	junction_11	63.5797035084692	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	-15	True	NA	-9	True	AATAAA	-23	NA	127294167	127257289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_112218.known	chr2	-	11360	17	FSM	ENSG00000169967.17	ENST00000682094.1	11360	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_15	8.83529852353615	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTCCAAATCTATT	-21	True	NA	0	True	AATAAA	-24	NA	127387975	127298667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127307805_127308584_127308763_127314753_127314884_127317628_127317761_127318168_127318318_127322045_127322253_127323901_127323995_127324173_127324242_127325727_127325808_127326686_127326818_127329920_127330009_127330391_127330506_127335869_127335970_127337737_127337779_127338931_127339051_127343125_127343195_127387451
transcript_112221.known	chr2	+	489	3	FSM	ENSG00000236682.3	ENST00000692842.1	559	3	64	6	0	0	multi-exon	FALSE	canonical	3	63	junction_1	15	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATAAATTTTTTCC	9	True	NA	14	True	AATAAA	-23	NA	127388241	127389411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_127388312_127388880_127388999_127389110
transcript_112223.known	chr2	+	779	2	FSM	ENSG00000115718.18	ENST00000402125.2	779	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGCCTGCTGTTCTGTC	4	True	NA	NA	False	ATTAAA	-18	NA	127423288	127429015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_127423409_127428356
transcript_112227.known	chr2	-	2973	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_10	46.0244339531738	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-10	True	NA	-19	True	AATAAA	-15	NA	127526489	127480811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
transcript_112238.nic	chr2	-	1875	7	NIC	ENSG00000163166.15	novel	2973	14	NA	NA	-13	4427	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	221.350212709784	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAAAACAGTAAGTTT	-23	True	NA	NA	False	CATAAA	-1	NA	127526502	127498151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127506691_127506720_127523675_127523792_127526174
transcript_11224.known	chr1	-	792	7	FSM	ENSG00000117519.16	ENST00000415017.1	792	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1484.94956891546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTATGATCAGAAGCTAA	1708	False	NA	NA	False	NA	NA	NA	94925801	94898051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94925632
transcript_112240.nic	chr2	-	1655	5	NIC	ENSG00000163166.15	novel	608	4	NA	NA	4	-859	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	243.762563778772	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGAAGGATCTGTTTG	2	True	NA	NA	False	AAGAAA	-3	NA	127526477	127503437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127503577_127504683_127505753_127506691_127506720_127523675_127523792_127526174
transcript_112241.known	chr2	-	608	4	FSM	ENSG00000163166.15	ENST00000436740.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	231.459619708397	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCGACTCTGAGAGTGA	-6	True	NA	NA	False	NA	NA	NA	127526440	127505554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127505753_127506691_127506720_127523675_127523792_127526174
transcript_112243.known	chr2	-	1080	3	FSM	ENSG00000163166.15	ENST00000409725.1	1080	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGGAAAATGAGGAGCTAC	NA	False	NA	NA	False	NA	NA	NA	127526886	127505039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127505753_127523675_127523792_127526635
transcript_112245.known	chr2	-	2111	10	FSM	ENSG00000072163.20	ENST00000324938.9	2111	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	7.57350808353421	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	936	False	NA	-5	True	AATGAA	-16	NA	127664546	127638425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127664305
transcript_112246.known	chr2	-	2387	10	FSM	ENSG00000072163.20	ENST00000355119.9	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	6.03692342542494	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-6	True	NA	-5	True	AATGAA	-16	NA	127675530	127638425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127675013
transcript_11225.known	chr1	-	1991	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	3614	junction_1	241.144090166486	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCACAGGCTGATTA	3	True	NA	-6	True	AATAAA	-20	NA	94927110	94896956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
transcript_112254.known	chr2	-	9490	22	FSM	ENSG00000136709.12	ENST00000322313.9	9490	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_9	62.1740297658457	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACCTGTGTAACTCA	0	True	NA	-5	True	AATAAA	-19	NA	127811171	127701026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_112263.nic	chr2	-	1778	15	ISM	ENSG00000136709.12	ENST00000322313.9	9490	22	-17	20902	-1	4723	5prime_fragment	FALSE	canonical	3	184	junction_2	69.9148534625789	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACATTAAATTGGAAGA	-17	True	NA	NA	False	AATAAA	-43	NA	127811188	127721928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_112274.known	chr2	-	3104	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	15.239422561239	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATTAATAAACCTCT	0	True	NA	-45	True	NA	NA	NA	127811171	127762532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_112285.known	chr2	-	5038	4	FSM	ENSG00000144231.11	ENST00000272645.9	5038	4	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_3	38.5774833578115	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGTCAGATAATTTT	-20	True	NA	NA	False	AATAAA	-16	NA	127858155	127843552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127858027
transcript_112290.known	chr2	-	1758	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	300.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	18	True	NA	-40	True	AAGAAA	-5	NA	127858117	127846698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127848186_127852924_127853106_127858027
transcript_112292.nnic	chr2	-	1751	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	0	40	combination_of_known_splicesites	FALSE	canonical	3	125	junction_2	341	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTACTTC	-20	True	NA	0	True	AATAAA	-23	NA	127858155	127846658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127848186_127850589_127850686_127858027
transcript_112295.known	chr2	-	1037	2	FSM	ENSG00000144231.11	ENST00000487079.1	1037	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCATAGCCCCTTGA	16	True	NA	NA	False	NA	NA	NA	127858119	127847240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127848186_127858027
transcript_112298.known	chr2	-	4803	9	FSM	ENSG00000144233.11	ENST00000681313.1	4803	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.7054313170472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAAAATCGTTTTGTTC	5	True	NA	-24	True	AATAAA	-8	NA	127885945	127861638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127867144_127867280_127869453_127869541_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
transcript_112302.known	chr2	-	4692	8	FSM	ENSG00000144233.11	ENST00000272647.10	4692	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	11.3999641961486	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTTGTTCTGCTTTTTC	-6	True	NA	-15	True	AATAAA	-17	NA	127885956	127861629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127869453_127869545_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
transcript_112309.known	chr2	-	4567	7	FSM	ENSG00000144233.11	ENST00000680886.1	4567	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	28.5038983688586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCATAATGGATAAAAAT	230	False	NA	-34	True	NA	NA	NA	127885961	127861648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127869453_127869545_127870813_127870929_127873827_127874273_127884202_127884313_127885809
transcript_11231.known	chr1	-	1974	6	FSM	ENSG00000117519.16	ENST00000394202.8	1974	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	1511.78551388747	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGATTATTTTCTGG	286	False	NA	2	True	AATAAA	-28	NA	94927223	94896948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94903121_94903189_94903402_94903525_94926837
transcript_112313.known	chr2	-	4349	5	FSM	ENSG00000144233.11	ENST00000679574.1	4349	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	32.368001173999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATGGATAAAAATCGTT	5	True	NA	-30	True	AATAAA	-2	NA	127885945	127861644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127873827_127874273_127884202_127884313_127885809
transcript_112320.known	chr2	-	4173	21	FSM	ENSG00000136715.19	ENST00000357702.9	4173	21	0	0	0	0	multi-exon	TRUE	canonical	2	50	junction_20	42.1041565644058	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCATCTTTTTGTA	-3	True	NA	-2	True	AATAAA	-27	NA	128027295	127941216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
transcript_112322.known	chr2	-	4140	21	FSM	ENSG00000136715.19	ENST00000259234.10	4140	21	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	48.366181366736	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCGCAGTTTGCATCT	-1	True	NA	-9	True	AATAAA	-20	NA	128028120	127941223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986960_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
transcript_112330.known	chr2	-	4065	20	FSM	ENSG00000136715.19	ENST00000259235.7	4065	20	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_19	49.0701346680798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTTTGCATCTTTTTGT	-1	True	NA	-3	True	AATAAA	-26	NA	128027293	127941217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
transcript_112332.nic	chr2	-	4040	20	NIC	ENSG00000136715.19	novel	4084	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	77	junction_6	37.0639187353707	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCAGTTTGCATCTTT	-1	True	NA	-7	True	AATAAA	-22	NA	128028120	127941221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
transcript_112344.known	chr2	+	10761	41	FSM	ENSG00000136731.13	ENST00000259253.11	10761	41	0	0	0	0	multi-exon	FALSE	canonical	2	67	junction_22	19.1479600741176	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	-5	True	NA	39	True	AGTAAA	-22	NA	128091199	128195677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_128091416_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
transcript_112346.known	chr2	-	400	3	FSM	ENSG00000214100.9	ENST00000433290.6	407	3	5	2	-1	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTGTCTGCTGACAG	11	True	NA	NA	False	AATAAA	-18	NA	129934317	129922862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_129923000_129923557_129923682_129934178
transcript_112356.known	chr2	-	1329	8	FSM	ENSG00000152076.19	ENST00000409943.8	1329	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	13.0571741168741	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145112	130139286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142184_130143268_130143314_130144746
transcript_112357.known	chr2	-	1549	8	FSM	ENSG00000152076.19	ENST00000310463.10	1549	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	11.141025490483	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145134	130139286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142382_130143268_130143314_130144746
transcript_11236.known	chr1	+	1614	4	FSM	ENSG00000235501.7	ENST00000438509.3	1615	4	0	1	0	0	multi-exon	FALSE	canonical	3	13	junction_3	7.48331477354788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	2	True	NA	13	True	AATAAA	-20	NA	94927365	94963270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962924
transcript_112365.nic	chr2	-	2381	7	NIC	ENSG00000152076.19	novel	1549	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	51	junction_2	9.46337971105226	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145079	130139286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130143314_130144746
transcript_11237.known	chr1	+	1514	4	FSM	ENSG00000235501.7	ENST00000659935.1	1514	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	6.16441400296898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	11	True	NA	13	True	AATAAA	-20	NA	94927411	94963270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962978
transcript_112376.nic	chr2	-	3209	6	NIC	ENSG00000152076.19	novel	1549	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	51	junction_2	10.2371871136558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145071	130139286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130143314_130144746
transcript_112379.nic	chr2	-	4003	5	NIC	ENSG00000152076.19	novel	1549	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	51	junction_2	11.0989864402116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145079	130139286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130143314_130144746
transcript_11238.known	chr1	+	1662	3	FSM	ENSG00000235501.7	ENST00000666627.1	1662	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGATGGAGTCTTGC	77	False	NA	NA	False	AAAACA	-44	NA	94927477	94963616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94928403_94931871_94931986_94962993
transcript_112385.known	chr2	-	4896	20	FSM	ENSG00000136699.20	ENST00000409031.5	4896	20	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	225.621787812556	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTGGCACCTGGGCT	1143	False	NA	NA	False	AATAAA	-17	NA	130182750	130151408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130161185_130161273_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_11239.known	chr1	-	9375	4	FSM	ENSG00000172339.10	ENST00000370205.6	9375	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	10.6144555520604	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTGTTACATATATGA	1	True	NA	NA	False	AATAAA	-20	NA	95072951	94974404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94983307_95027128_95027261_95064865_95065018_95072762
transcript_112396.nic	chr2	-	3848	19	NIC	ENSG00000136699.20	novel	4896	20	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_18	175.826557706911	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTGGCACCTGGGCT	2338	False	NA	NA	False	AATAAA	-17	NA	130181555	130151408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181295
transcript_112397.known	chr2	-	3661	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	76.6949223293896	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	-7	True	NA	NA	False	AATAAA	-18	NA	130181601	130151407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_112400.known	chr2	-	3768	19	FSM	ENSG00000136699.20	ENST00000680679.1	3768	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	181.640747386458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAAACATGTCCTTGC	-2	True	NA	NA	False	AATGAA	-20	NA	130181596	130151433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156814_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_112402.nic	chr2	-	4070	19	NIC	ENSG00000136699.20	novel	4896	20	NA	NA	-332	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	173.793690661026	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTGGCACCTGGGCT	5	True	NA	NA	False	AATAAA	-17	NA	130182089	130151408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154354_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_112410.known	chr2	-	3614	17	FSM	ENSG00000136699.20	ENST00000431183.6	3614	17	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_14	192.917080633105	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTCTCTAGGAGGTTC	2136	False	NA	NA	False	AATAAA	-34	NA	130181757	130151391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130174913_130175001_130176553_130176638_130181529
transcript_11243.known	chr1	+	6805	7	FSM	ENSG00000152078.10	ENST00000370203.9	6805	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	4.81894409826699	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCTGCAAGGTGTATA	-27	True	NA	22	True	AATAAA	-23	NA	95117354	95197607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95117618_95143890_95144057_95148701_95148792_95150207_95150267_95151324_95151420_95173815_95173890_95191549
transcript_112430.known	chr2	+	769	4	FSM	ENSG00000152082.15	ENST00000409255.1	769	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	950.602031463337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTCCAGGTCAGATGT	-8	True	NA	26	True	AATAAA	-15	NA	130182256	130190712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130182626_130182776_130183786_130183967_130190468
transcript_112433.known	chr2	+	599	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_2	1	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	-3	True	NA	41	True	AATAAA	-30	NA	130182261	130190727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130182626_130182776_130190468
transcript_112434.known	chr2	+	455	3	FSM	ENSG00000152082.15	ENST00000425361.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	983	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	53	False	NA	27	True	AATAAA	-16	NA	130181736	130190713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130181798_130182626_130182776_130190468
transcript_112435.known	chr2	+	435	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTGAGATGCAGA	88	False	NA	9	True	NA	NA	NA	130181771	130190695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130181831_130182626_130182776_130190468
transcript_112438.known	chr2	+	583	2	FSM	ENSG00000152082.15	ENST00000485869.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	2026	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGACAGGGTGAGATCCT	150	False	NA	NA	False	NA	NA	NA	130182414	130183171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130182626
transcript_112441.known	chr2	+	401	2	FSM	ENSG00000152082.15	ENST00000455239.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACCGTTTTTTTT	48	False	NA	43	True	AATAAA	-32	NA	130182312	130190729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130190468
transcript_112443.known	chr2	-	3601	19	FSM	ENSG00000136699.20	ENST00000412570.5	3601	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	183.798878608597	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	1	True	NA	NA	False	AATAAA	-18	NA	130181593	130151407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173605_130174913_130175001_130176553_130176638_130181529
transcript_112444.known	chr2	+	603	3	FSM	ENSG00000152082.15	ENST00000651060.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1012	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGATGCAGAGGGT	266	False	NA	13	True	AATAAA	-2	NA	130182223	130190699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182447_130182626_130182776_130190468
transcript_112445.known	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	290	False	NA	41	True	AATAAA	-30	NA	130182554	130190727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182776_130190468
transcript_112447.known	chr2	-	1847	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	141.203965949969	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	339	False	NA	-2	True	AGTAAA	-21	NA	130342349	130338242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_112448.known	chr2	-	2063	6	FSM	ENSG00000136710.10	ENST00000651709.1	2063	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	143.65737015552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACCACTACCCAACTT	-11	True	NA	-17	True	AGTAAA	-6	NA	130342699	130338257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_112452.known	chr2	-	1769	5	FSM	ENSG00000136710.10	ENST00000259229.7	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	16.4069345095298	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTGAACTTTAACATAA	-12	True	NA	NA	False	AATACA	-20	NA	130342164	130337932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_112453.nnic	chr2	-	1422	5	NNC	ENSG00000136710.10	novel	1769	5	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	129.891060123474	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAACTTTTGTGTTTTT	-4	True	NA	-7	True	AGTAAA	-16	NA	130342156	130338247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342038
transcript_112454.known	chr2	-	1247	5	FSM	ENSG00000136710.10	ENST00000409127.1	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	122.589763031013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTCTGTTCTGGGA	364	False	NA	NA	False	NA	NA	NA	130342324	130338495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_112462.known	chr2	-	3562	2	FSM	ENSG00000136710.10	ENST00000465315.1	3562	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAACTTTTGTGTTTTTT	17	True	NA	-6	True	AGTAAA	-17	NA	130342135	130338246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130339559
transcript_112467.known	chr2	+	924	9	FSM	ENSG00000136718.10	ENST00000428740.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	314.571037287287	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACTCACCACTCAGTC	33	True	NA	NA	False	NA	NA	NA	130342923	130346467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130342963_130343085_130343195_130344628_130344726_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_112480.known	chr2	+	2379	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.9443875198524	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	31	True	NA	30	True	AATAAA	-19	NA	130342921	130347810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_112481.nic	chr2	+	2184	16	NIC	ENSG00000072135.13	novel	3616	15	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	17.7646340300672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGAGGTCTGTTTTTCC	-11	True	NA	16	True	AATAAA	-16	NA	130356041	130375404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_130356201_130358866_130358976_130359232_130359310_130359396_130359493_130359607_130359647_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156_130373221_130374665
transcript_112483.known	chr2	+	3616	15	FSM	ENSG00000072135.13	ENST00000175756.10	3616	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	17.338761578072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	3	True	NA	17	True	AATAAA	-17	NA	130356055	130375405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130356201_130358866_130358976_130359232_130359310_130359396_130359493_130359607_130359647_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
transcript_112493.nic	chr2	+	2600	12	NIC	ENSG00000072135.13	novel	3616	15	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_2	17.118932537973	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTGGACAAATCTCCA	0	True	NA	14	True	AATAAA	-22	NA	130356025	130374571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_130356201_130358866_130358976_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
transcript_112496.known	chr2	+	2472	11	FSM	ENSG00000072135.13	ENST00000347849.7	2472	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	18.4770127455712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTGGACAAATCTCCA	-8	True	NA	14	True	AATAAA	-22	NA	130356044	130374571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130356201_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
transcript_112499.known	chr2	+	460	4	FSM	ENSG00000072135.13	ENST00000489215.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	27.9404127862612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACAGAGCATGGAGGGG	2	True	NA	NA	False	NA	NA	NA	130356054	130370229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130356201_130369132_130369202_130369764_130369828_130370047
transcript_112500.known	chr2	+	1717	2	FSM	ENSG00000072135.13	ENST00000462321.1	1717	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTTAAAAGAAATAAAAGG	353	False	NA	-24	True	GATAAA	-12	NA	130372607	130374533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130372948_130373156
transcript_112502.known	chr2	-	603	6	FSM	ENSG00000178162.8	ENST00000433703.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	28.1595454508769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTAGTCTCAAAGG	NA	False	NA	NA	False	AATAGA	-14	NA	130427775	130418233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_112504.nic	chr2	-	3604	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-344	5	intron_retention	FALSE	canonical	3	75	junction_3	30.9626791476448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130428520	130416749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_112505.known	chr2	-	555	5	FSM	ENSG00000178162.8	ENST00000423905.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	48.859492424707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTTAGAGATGAATGAA	NA	False	NA	NA	False	NA	NA	NA	130427742	130418150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130427703
transcript_11251.known	chr1	+	1294	5	FSM	ENSG00000122481.17	ENST00000495272.5	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	96.5789832209886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	12	True	NA	10	True	ATTAAA	-10	NA	95234220	95247217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_112511.known	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	40.7130882586369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
transcript_112514.nic	chr2	-	3489	3	NIC	ENSG00000178162.8	novel	2070	4	NA	NA	-452	5	intron_retention	FALSE	canonical	3	58	junction_2	49	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130428628	130416749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130419246_130425090_130425159_130427703
transcript_112517.known	chr2	+	573	5	FSM	ENSG00000240253.6	ENST00000425151.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	8.8140512819021	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGAGGCCCCAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	130693734	130702473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253
transcript_11252.nnic	chr1	+	1135	5	NNC	ENSG00000122481.17	novel	1294	5	NA	NA	-18	5561	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	103.666231242387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGTAGCTCCATGTTC	-17	True	NA	4	True	AATAAA	-16	NA	95234191	95252786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755_95246862_95252485
transcript_112520.known	chr2	+	6735	14	FSM	ENSG00000136002.20	ENST00000409359.7	6735	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	30.8635094086488	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	-4	True	NA	15	True	AATAAA	-15	NA	130836913	131047253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130836993_130913985_130917499_130930951_130931258_130946508_130946636_131027944_131028085_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
transcript_112524.nnic	chr2	+	2981	11	Fusion	ENSG00000136002.20_ENSG00000284479.1	novel	3229	7	NA	NA	37	0	multi-exon	FALSE	canonical	1	6	junction_3	41.1277278730542	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	-14	True	NA	15	True	AATAAA	-15	NA	131035008	131047253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_+_131035289_131038852_131039033_131039371_131039503_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
transcript_112526.nnic	chr2	+	2903	10	NIC	ENSG00000136002.20	novel	2102	10	NA	NA	275	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	33.9836562024878	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	229	False	NA	15	True	AATAAA	-15	NA	130963916	131047253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_130964250_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
transcript_112527.nic	chr2	+	2850	10	Fusion	ENSG00000136002.20_ENSG00000284479.1	novel	3229	7	NA	NA	37	0	multi-exon	FALSE	canonical	3	31	junction_1	25.4592387848925	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	-14	True	NA	15	True	AATAAA	-15	NA	131035008	131047253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_+_131035289_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
transcript_112534.known	chr2	-	1273	2	FSM	ENSG00000233221.7	ENST00000446213.2	1273	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATTCGCTCTTCTCTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	130836994	130835437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130836026_130836309
transcript_112540.known	chr2	-	5435	7	FSM	ENSG00000152102.18	ENST00000389915.4	5435	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_6	34.8600376107402	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	-25	True	NA	-1	True	AATAAA	-18	NA	131093460	131047875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131093213
transcript_112541.known	chr2	-	5285	7	FSM	ENSG00000152102.18	ENST00000409185.5	5285	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	145.06741727747	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	7	True	NA	-1	True	AATAAA	-18	NA	131093428	131047875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131093331
transcript_112545.known	chr2	+	4349	9	FSM	ENSG00000115762.17	ENST00000403716.5	4349	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	255.514401502146	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	61	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131144407_131144450_131146636
transcript_112547.known	chr2	+	4208	8	FSM	ENSG00000115762.17	ENST00000234115.10	4208	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	188.526401550639	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGACTTCTGTTGTCTTT	158	False	NA	25	True	ATTAAA	-25	NA	131104943	131149852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140169_131140276_131146636
transcript_11255.nic	chr1	+	1211	4	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_2	110.225022365866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	NA	False	NA	16	True	ATTAAA	-16	NA	95234129	95247223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_95234316_95244210_95244652_95246541_95246658_95246755
transcript_112550.known	chr2	+	2277	8	FSM	ENSG00000115762.17	ENST00000409158.5	2277	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	199.985305582634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	61	False	NA	NA	False	NA	NA	NA	131104846	131147797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140166_131140276_131146636
transcript_112553.nic	chr2	+	2037	7	ISM	ENSG00000115762.17	ENST00000693505.1	3812	8	-49	8185	-15	-5769	5prime_fragment	FALSE	canonical	3	464	junction_6	84.2748479678249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTATGACAGATTAAAT	501	False	NA	NA	False	NA	NA	NA	131105286	131141660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166
transcript_112555.known	chr2	+	4177	6	FSM	ENSG00000115762.17	ENST00000439822.6	4177	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	260.878822444444	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	61	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131140166_131140276_131146636
transcript_112558.known	chr2	-	3677	1	FSM	ENSG00000233087.8	ENST00000623617.3	3677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGTTTGAGATAAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	131364168	131360491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131360500_131364200
transcript_112559.known	chr2	+	1520	5	FSM	ENSG00000075886.11	ENST00000321253.7	1520	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTGTGTCGTGCAG	11	True	NA	NA	False	ATTAAA	-19	NA	131476118	131482934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131476203_131478163_131478387_131479307_131479457_131480068_131480750_131482551
transcript_11256.known	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	66.5482281256734	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	1	True	NA	18	True	ATTAAA	-18	NA	95234209	95247225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
transcript_112573.known	chr2	-	2826	2	FSM	ENSG00000173272.16	ENST00000491265.1	2826	2	0	0	0	0	multi-exon	FALSE	canonical	3	1512	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCAGGTGGGCGTGGTG	18	False	NA	NA	False	NA	NA	NA	131492376	131489368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131492025_131492206
transcript_112574.known	chr2	-	980	4	FSM	ENSG00000173272.16	ENST00000445782.2	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	698.154392348537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGAGGAAGCTATTTA	7	True	NA	-86	True	NA	NA	NA	131492387	131469808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131470344_131472067_131472183_131491875_131492025_131492206
transcript_112575.known	chr2	-	599	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	16	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-3	True	NA	-19	True	AATAAA	-30	NA	131492397	131483959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131484219_131491875_131492025_131492206
transcript_112578.known	chr2	+	3785	18	FSM	ENSG00000152117.18	ENST00000438378.2	3785	18	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_8	32.2206922703505	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	NA	False	NA	34	True	AATAAA	-18	NA	131492812	131521573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
transcript_112587.known	chr2	+	1290	8	FSM	ENSG00000163040.15	ENST00000409856.8	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	36.8421896577214	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-9	True	NA	NA	False	AATAAA	-17	NA	131527887	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_112589.known	chr2	+	1543	8	FSM	ENSG00000163040.15	ENST00000295171.10	1543	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	45.2002347835694	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	9655	False	NA	NA	False	AATAAA	-17	NA	131527832	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_11259.nnic	chr1	+	1142	3	NIC	ENSG00000122481.17	novel	1078	3	NA	NA	-80	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	79	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	NA	False	NA	16	True	ATTAAA	-16	NA	95234129	95247223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_95234316_95244210_95244699_95246755
transcript_112595.nic	chr2	+	1205	8	NIC	ENSG00000163040.15	novel	1290	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	72.223858345326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-45	True	NA	NA	False	AATAAA	-17	NA	131527851	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532709_131532782_131532863_131532938_131533012_131533070_131533268
transcript_112596.nic	chr2	+	1637	8	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	75.9188610912187	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-32	True	NA	NA	False	AATAAA	-17	NA	131527864	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528347_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_112599.nic	chr2	+	1439	8	NIC	ENSG00000163040.15	novel	1290	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	72.6652936274201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-32	True	NA	NA	False	AATAAA	-17	NA	131527864	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528347_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_11260.known	chr1	+	1078	3	FSM	ENSG00000122481.17	ENST00000263893.10	1078	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	97.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	2	True	NA	16	True	ATTAAA	-16	NA	95234210	95247223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95244210_95244716_95246755
transcript_112618.nic	chr2	+	2112	7	NIC	ENSG00000163040.15	novel	1290	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	125	junction_2	38.3956015999518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-45	True	NA	NA	False	AATAAA	-17	NA	131527851	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131532782_131532863_131532938_131533012_131533070_131533268
transcript_112622.nic	chr2	+	2411	7	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	175	junction_3	22.956480566498	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-45	True	NA	NA	False	AATAAA	-17	NA	131527851	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_11263.nnic	chr1	+	744	3	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	87.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-6	True	NA	16	True	ATTAAA	-16	NA	95234155	95247223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_95234316_95246541_95246658_95246755
transcript_112641.nic	chr2	+	3197	6	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	197	junction_1	17.9265166722372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-45	True	NA	NA	False	AATAAA	-17	NA	131527851	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131530828_131531663_131532782_131532863_131532938_131533012_131533070_131533268
transcript_112644.nic	chr2	+	3247	6	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	175	junction_2	24.1942141843871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-45	True	NA	NA	False	AATAAA	-17	NA	131527851	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_11265.known	chr1	+	513	2	FSM	ENSG00000122481.17	ENST00000473397.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTTTTCATGTTT	59	False	NA	13	True	ATTAAA	-13	NA	95234267	95247220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95246755
transcript_112656.nic	chr2	+	4033	5	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	197	junction_1	16.1632298752446	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-45	True	NA	NA	False	AATAAA	-17	NA	131527851	131533666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131532782_131532863_131532938_131533012_131533070_131533268
transcript_112662.known	chr2	+	1080	2	FSM	ENSG00000163040.15	ENST00000465939.1	1080	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTTGCCACTTGTCCA	9497	False	NA	NA	False	NA	NA	NA	131527674	131530180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131528221_131529646
transcript_112664.known	chr2	+	1347	7	FSM	ENSG00000163040.15	ENST00000467992.6	1347	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	84.7120941122865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGTGTGCCTGGCTCCT	9656	False	NA	NA	False	AATAAA	-15	NA	131527833	131533664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532863_131532938_131533012_131533070_131533268
transcript_11267.known	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_8	32.2642565158522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_112673.known	chr2	+	2119	6	FSM	ENSG00000287151.1	ENST00000666411.1	2119	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	12.4995999935998	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTTTCACAAAGAAAAAAA	-30	True	NA	NA	False	AATGAA	-4	NA	131682480	131698401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131696868
transcript_112676.known	chr2	+	2576	2	FSM	ENSG00000183840.7	ENST00000329321.4	2576	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTGTACAAGACACAGC	-26	True	NA	32	True	AATAAA	-43	NA	132416804	132646582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_132417899_132645100
transcript_112678.known	chr2	-	3458	3	FSM	ENSG00000150551.11	ENST00000397463.3	3458	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCTTTGAGTTTGCT	4	True	NA	NA	False	AATATA	-15	NA	132670205	132643285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_132646281_132668399_132668538_132669880
transcript_11268.known	chr1	+	3054	14	FSM	ENSG00000117569.19	ENST00000370198.5	3054	14	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_8	31.4578707660912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_112685.known	chr2	-	3510	4	FSM	ENSG00000224043.8	ENST00000428857.2	3510	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.34209919681348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAGCATAGCCATAT	750	False	NA	NA	False	AATATA	-37	NA	134918710	134864599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_134867740_134868943_134869042_134877519_134877644_134918562
transcript_112686.known	chr2	-	636	3	FSM	ENSG00000224043.8	ENST00000413962.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAACAAGCGTCAGGAA	-11	True	NA	NA	False	AATATA	-7	NA	134918678	134867317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_134867740_134868943_134869042_134918562
transcript_112688.known	chr2	+	4491	10	FSM	ENSG00000082258.13	ENST00000295238.10	4491	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	77.4622169946639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATTGTGTGAGCTATTC	-14	True	NA	10	True	ATTAAA	-23	NA	134918824	134957017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229_134954380_134954480
transcript_112690.known	chr2	+	6920	9	FSM	ENSG00000082258.13	ENST00000264157.10	6920	9	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_7	43.5545634807651	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCTCTAACATGTCT	-17	True	NA	NA	False	AATAAA	-21	NA	134918821	134959342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229
transcript_112698.known	chr2	+	606	5	FSM	ENSG00000082258.13	ENST00000475094.1	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	9.13783344124853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCATTAAAATTAGGGAG	-2	True	NA	NA	False	NA	NA	NA	134918836	134942769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611
transcript_112699.known	chr2	+	4891	24	FSM	ENSG00000115839.19	ENST00000264158.13	4891	24	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	19.8799801455135	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTAGGAGTTTCTTCA	2	True	NA	NA	False	AATAAA	-18	NA	135052291	135170710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135168544
transcript_11270.known	chr1	+	1129	5	FSM	ENSG00000117569.19	ENST00000460706.5	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	8.04285397107271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATGGAAAACTGTTCC	7	True	NA	NA	False	AATAAA	-2	NA	96721791	96771475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707
transcript_112706.known	chr2	-	6712	21	FSM	ENSG00000121988.18	ENST00000264159.11	6712	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	12.5078975051765	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCTCTGCCCTAGCA	-21	True	NA	1	True	ATTAAA	-22	NA	135531218	135196968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_11271.known	chr1	+	1736	9	FSM	ENSG00000162627.17	ENST00000306121.8	1736	9	0	0	0	0	multi-exon	TRUE	canonical	3	408	junction_7	38.4407010862185	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	-1	True	NA	13	True	AATAAA	-15	NA	98661720	98760500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_112722.known	chr2	+	4272	23	FSM	ENSG00000048991.17	ENST00000409478.5	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_13	44.9216259649942	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	13	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
transcript_112728.nic	chr2	+	1092	8	ISM	ENSG00000048991.17	ENST00000409478.5	4272	23	-35	89268	-7	-185	5prime_fragment	FALSE	canonical	3	198	junction_3	40.5814876865935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCTAGAACAATTGTAG	-22	True	NA	NA	False	NA	NA	NA	135531465	135635998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889
transcript_11273.known	chr1	-	3983	6	FSM	ENSG00000117598.13	ENST00000263177.5	3983	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	8	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTGTAATATATT	-10	True	NA	2	True	AATAAA	-28	NA	99004861	98890244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_98893105_98914785_98914921_98921881_98922059_98953069_98953321_98956608_98956742_99004434
transcript_112730.known	chr2	+	2241	3	FSM	ENSG00000048991.17	ENST00000463230.5	2241	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGGAGGCAGAGGTTAC	-15	True	NA	NA	False	NA	NA	NA	135531472	135606676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135531634_135602499_135602709_135604805
transcript_112731.known	chr2	+	3771	13	FSM	ENSG00000144224.17	ENST00000272638.14	3771	13	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	62.7386554596836	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACCTTGCATCTTGC	-6	True	NA	9	True	AATAAA	-16	NA	135741854	135785056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
transcript_11274.known	chr1	+	7091	34	FSM	ENSG00000162688.17	ENST00000361915.8	7091	34	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_9	30.7375214514288	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	2	True	NA	16	True	AATAAA	-18	NA	99850360	99924020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
transcript_112740.nic	chr2	+	993	8	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-242	14467	-121	8678	5prime_fragment	FALSE	canonical	3	434	junction_7	57.8562610162073	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAGGAGAAAAACTGGA	-21	True	NA	17	True	CATAAA	-38	NA	135741612	135770589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570
transcript_112742.nic	chr2	+	974	7	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-242	15233	-121	7912	5prime_fragment	FALSE	canonical	3	478	junction_3	45.6779183219006	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTTCATGCAGTTAGC	-21	True	NA	9	True	AAGAAA	-33	NA	135741612	135769823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768
transcript_112746.nic	chr2	+	919	6	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-242	23145	-121	0	5prime_fragment	FALSE	canonical	3	478	junction_3	49.5766073869522	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	-21	True	NA	20	True	NA	NA	NA	135741612	135761911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817
transcript_112749.known	chr2	+	1255	5	FSM	ENSG00000144224.17	ENST00000416538.5	1255	5	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	38.3438391400757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	7	True	NA	20	True	NA	NA	NA	135741867	135761911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135754278_135755516_135755692_135761817
transcript_112752.known	chr2	+	568	4	FSM	ENSG00000144224.17	ENST00000426921.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	265.865045130461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGGACCTCAACATCC	12	True	NA	-10	True	NA	NA	NA	135741785	135761881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135742012_135748266_135748370_135755516_135755692_135761817
transcript_112755.known	chr2	-	3753	17	FSM	ENSG00000076003.5	ENST00000264156.3	3753	17	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_13	109.26859109552	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATACTCAAGTAGAT	19	False	135876462	-12	True	AATAAA	-20	NA	135876443	135839625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_112759.nic	chr2	-	2407	16	ISM	ENSG00000076003.5	ENST00000264156.3	3753	17	-43	4982	-43	0	5prime_fragment	FALSE	canonical	3	923	junction_12	73.3852543468751	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAACTTATAAATAA	NA	False	NA	NA	False	NA	NA	NA	135876486	135844607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_11276.known	chr1	+	7446	34	FSM	ENSG00000162688.17	ENST00000294724.8	7446	34	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	39.4065480987342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	-2	True	NA	16	True	AATAAA	-18	NA	99850488	99924020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99850899_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
transcript_112768.known	chr2	-	3099	16	FSM	ENSG00000115866.11	ENST00000264161.9	3099	16	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_8	63.7311715114529	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTAATCTTTTTTA	-6	True	NA	-1	True	AATAAA	-16	NA	135985626	135905880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135907408_135911138_135911211_135911381_135911494_135912485_135912567_135914468_135914512_135916225_135916373_135920452_135920601_135922783_135922919_135924386_135924499_135932782_135932843_135933909_135933991_135943377_135943481_135961395_135961499_135979273_135979367_135983396_135983455_135985402
transcript_112778.known	chr2	-	717	5	FSM	ENSG00000115866.11	ENST00000435076.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	843	junction_1	66.4807302908143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGTGATGCACCCAAC	351	False	NA	NA	False	NA	NA	NA	135985563	135943178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135943481_135961395_135961499_135979273_135979367_135983396_135983455_135985402
transcript_112780.known	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-1	True	NA	-3	True	AATAAA	-18	NA	136118149	136114348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_136115913_136118045
transcript_112781.known	chr2	-	1895	1	FSM	ENSG00000121966.7	ENST00000409817.1	1895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	3036	False	NA	-3	True	AATAAA	-18	NA	136116243	136114348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_136114300_136116200
transcript_112783.known	chr2	+	3132	6	FSM	ENSG00000150540.14	ENST00000280097.5	3132	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	3.00665927567458	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCTTTCAGACAC	0	True	NA	NA	False	AATAAA	-32	NA	137964472	138016364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_137964629_137970164_137970218_138000917_138001026_138002063_138002195_138005131_138005226_138013774
transcript_112785.known	chr2	+	6056	11	FSM	ENSG00000144228.9	ENST00000280098.9	6056	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	6.78527818147495	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCATTTGATGCTATC	-17	True	NA	NA	False	NA	NA	NA	138501769	138573547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_138502120_138550156_138550295_138550482_138550605_138550902_138551055_138552553_138552682_138559021_138559200_138559281_138559338_138560804_138560928_138564707_138564851_138564939_138564994_138568935
transcript_112788.known	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	6	True	NA	2	True	AATAAA	-28	NA	138780390	138669156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_138671666_138780190
transcript_112790.known	chr2	-	10585	12	FSM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	24.7362951454065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTATGTGTGTGTGT	-15	True	NA	NA	False	AATAAA	-29	NA	144332512	143938067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_112792.nic	chr2	-	2551	11	NIC	ENSG00000121964.15	novel	10585	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	26.8188366638078	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCATATTCATTTACATA	2	True	NA	-5	True	AATAAA	-32	NA	144332569	143946013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_112796.known	chr2	-	2677	12	FSM	ENSG00000121964.15	ENST00000542155.5	2677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.3052498777818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	37	True	NA	-7	True	AATAAA	-30	NA	144332534	143946015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211598_144235675_144235738_144332438
transcript_112797.known	chr2	-	2456	6	FSM	ENSG00000121964.15	ENST00000491448.5	2456	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	14.5958898324152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTGTCTTCCTTTGTA	5369	False	NA	NA	False	AATAAA	-23	NA	144235737	144005750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
transcript_112799.known	chr2	+	4131	2	FSM	ENSG00000204406.14	ENST00000478190.3	4131	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCACATTCAATAAAAG	144	False	NA	NA	False	NA	NA	NA	148021237	148028649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148021685_148024965
transcript_11280.nic	chr1	+	1034	5	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-283	59467	-283	-12044	5prime_fragment	FALSE	canonical	3	181	junction_1	22.9387772123974	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTATTACTGATGTT	-19	True	NA	6	True	ATTAAA	-15	NA	99850077	99864553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_112805.known	chr2	-	6547	14	FSM	ENSG00000115947.14	ENST00000392857.10	6547	14	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_7	43.0202924458932	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	-18	True	NA	1	True	TATAAA	-18	NA	148020737	147930395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020632
transcript_112808.nic	chr2	-	1741	14	NIC	ENSG00000115947.14	novel	6598	14	NA	NA	-10	1050	combination_of_known_junctions	FALSE	canonical	3	77	junction_13	106.785467619309	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACCATGTGCTTTTTTA	794	False	NA	-6	True	AATAAA	-19	NA	148020773	147935262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
transcript_112810.known	chr2	-	6598	14	FSM	ENSG00000115947.14	ENST00000264169.6	6598	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_13	122.948009409471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	NA	False	NA	0	True	TATAAA	-17	NA	148021604	147930396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148021447
transcript_112814.known	chr2	-	6472	13	FSM	ENSG00000115947.14	ENST00000540442.5	6472	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	123.115460713375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-18	True	NA	0	True	TATAAA	-17	NA	148020737	147930396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_148020632
transcript_112819.known	chr2	-	6328	11	FSM	ENSG00000115947.14	ENST00000536575.5	6328	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	136.431667878099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	0	True	NA	0	True	TATAAA	-17	NA	148020761	147930396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_148020632
transcript_112821.known	chr2	+	3883	14	FSM	ENSG00000135999.12	ENST00000258484.11	3883	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	5.41311141100282	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGCATATGTGTTT	11	True	NA	17	True	AATAAA	-20	NA	148644750	148787569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148645171_148690213_148690374_148743621_148743768_148753926_148754134_148761781_148761931_148762669_148762803_148764954_148765147_148769150_148769241_148770791_148770938_148771043_148771388_148781643_148781781_148783596_148783757_148784667_148785002_148786304
transcript_112824.known	chr2	+	6954	26	FSM	ENSG00000168280.18	ENST00000435030.6	6954	26	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	15.5614909311415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	-6	True	NA	NA	False	AATAAA	-17	NA	148875226	149026759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
transcript_112825.known	chr2	+	2957	19	FSM	ENSG00000168280.18	ENST00000678291.1	2957	19	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	16.7332005306815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTGGTCC	-6	True	NA	NA	False	AAAAAG	-16	NA	148875226	148998865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399
transcript_112826.nic	chr2	+	1448	11	ISM	ENSG00000168280.18	ENST00000676875.1	3315	14	-37	20894	-37	-57	5prime_fragment	FALSE	canonical	3	160	junction_8	16.2098735343617	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGGAAGAAGAAATATGA	9647	False	NA	5	True	AATACA	-31	NA	148875189	148962022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970
transcript_112832.known	chr2	+	1345	7	FSM	ENSG00000150556.17	ENST00000409642.8	1345	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	15.7762127549323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	-6	True	NA	NA	False	AATAAA	-24	NA	149038698	149215262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_112835.known	chr2	+	1248	6	FSM	ENSG00000150556.17	ENST00000409876.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.733126291999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	13	False	NA	NA	False	AATAAA	-18	NA	149038717	149215256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_149038802_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_112836.known	chr2	+	4011	5	FSM	ENSG00000187123.15	ENST00000334166.9	4011	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	8.57321409974112	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAAAATGTCAGTTTG	30	True	NA	11	True	AGTAAA	-21	NA	149330586	149474138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_149330723_149437637_149437827_149449048_149449148_149468644_149468776_149470682
transcript_112841.known	chr2	+	1022	3	FSM	ENSG00000231969.3	ENST00000687950.1	2498	3	0	1476	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCAGTTGTAGAGTCCC	3192	False	NA	NA	False	ATTAAA	-18	NA	149587195	149848233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_149587851_149743717_149743760_149847908
transcript_112843.known	chr2	-	1392	8	FSM	ENSG00000168288.13	ENST00000303319.10	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	1023	junction_1	37.4318428232282	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGTTTTCATTACA	16	False	149587791	-36	True	AATAAA	-19	NA	149587775	149569636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
transcript_112847.known	chr2	-	2684	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	36.201657420621	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-2	True	NA	-4	True	AATAAA	-25	NA	150487667	150468194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
transcript_112848.known	chr2	-	2777	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	10.7558123821495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-2	True	NA	-4	True	AATAAA	-25	NA	150487667	150468194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
transcript_112849.known	chr2	-	4176	4	FSM	ENSG00000184898.7	ENST00000331426.6	4176	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGTGTTTAAATGTG	-9	True	NA	NA	False	AATAAA	-17	NA	151261863	151247939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151251665_151252754_151252856_151255532_151255744_151261724
transcript_11285.known	chr1	+	2062	9	FSM	ENSG00000117620.15	ENST00000427993.7	2062	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	31.7369559819463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTTAATATTATTTTAA	214	False	NA	NA	False	NA	NA	NA	99969978	100023259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99974970_99975070_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_112851.known	chr2	-	1229	8	FSM	ENSG00000123609.11	ENST00000243346.10	1229	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	12.969351627304	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGTATTGGTGCCA	8427	False	151289688	-4	True	AATAAA	-15	NA	151289668	151270469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151270876_151271625_151271733_151275483_151275671_151275757_151275865_151278827_151278991_151281947_151282044_151282867_151282955_151289592
transcript_112852.known	chr2	+	1422	6	FSM	ENSG00000123610.5	ENST00000243347.5	1422	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.96647939483827	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTGCACCTCTCTA	-1	True	NA	15	True	AATAAA	-15	NA	151357591	151380046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_151357761_151363942_151364081_151366055_151366218_151370019_151370249_151373548_151373590_151379363
transcript_112853.known	chr2	-	20637	150	FSM	ENSG00000183091.21	ENST00000409198.5	20637	150	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	2.29894918056158	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATGGAATGAGCATTA	NA	False	NA	NA	False	AATAAA	-20	NA	151734487	151485335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151485934_151489970_151490078_151490371_151490519_151491682_151491776_151492097_151492282_151492386_151492495_151493352_151493446_151493774_151493868_151494160_151494254_151496275_151496369_151502792_151502886_151503348_151503442_151505477_151505571_151506165_151506259_151506908_151507014_151508004_151508110_151512732_151512838_151513579_151513694_151514317_151514429_151514817_151514929_151516458_151516564_151518317_151518423_151518964_151519070_151519657_151519769_151524310_151524416_151524514_151524617_151525162_151525274_151525957_151526069_151526157_151526263_151526917_151527023_151527480_151527586_151529209_151529315_151530993_151531102_151531791_151531897_151534214_151534320_151535690_151535796_151537131_151537237_151537871_151537977_151538139_151538245_151540343_151540449_151540696_151540802_151541446_151541552_151545887_151545999_151546344_151546444_151547428_151547534_151547633_151547739_151548307_151548416_151549635_151549741_151551737_151551846_151552671_151552777_151553397_151553503_151553827_151554026_151554930_151555045_151560591_151560700_151561003_151561109_151561207_151561313_151562109_151562215_151562610_151562809_151563605_151563720_151563822_151563931_151565043_151565149_151565500_151565606_151565715_151565821_151567167_151567480_151568070_151568179_151568315_151568418_151568617_151568717_151569267_151569373_151570080_151570393_151570496_151570602_151575694_151575800_151576150_151576355_151609808_151610121_151610515_151610624_151610761_151610867_151612185_151612390_151614275_151614588_151616001_151616110_151617363_151617469_151618274_151618479_151619450_151619763_151620918_151621027_151625533_151625639_151627001_151627206_151627522_151627835_151629538_151629647_151630714_151630820_151631142_151631179_151639892_151640061_151640354_151640667_151642573_151642682_151642764_151642870_151643149_151643354_151643817_151644130_151644467_151644576_151646129_151646235_151650175_151650380_151650573_151650886_151653991_151654100_151655269_151655375_151655816_151656024_151656152_151656465_151657982_151658091_151659064_151659170_151662134_151662342_151663547_151663860_151664500_151664609_151664758_151664864_151665332_151665540_151666089_151666402_151667803_151667912_151669026_151669132_151671022_151671230_151672368_151672681_151674476_151674585_151675286_151675392_151677564_151677772_151677875_151678188_151679720_151679829_151679917_151680023_151680729_151680829_151682661_151682770_151684777_151684976_151687418_151687533_151687625_151687734_151688291_151688397_151690726_151690826_151691863_151691969_151692058_151692167_151692260_151692363_151694322_151694437_151694521_151694630_151695577_151695683_151696636_151696736_151697147_151697253_151697349_151697458_151697543_151697649_151706880_151706998_151709655_151709764_151710433_151710539_151717415_151717521_151723381_151723487_151724259_151724365_151724856_151724962_151725452_151725561_151727690_151727907_151729614_151729657_151733120_151733186_151733711_151733796_151734397
transcript_112862.nic	chr2	+	3165	26	ISM	ENSG00000080345.18	ENST00000428287.6	7722	35	-45	15288	-42	4990	5prime_fragment	FALSE	canonical	0	0	junction_16	35.8642774916769	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	NA	False	NA	NA	False	AATAAA	-9	NA	151409840	151460100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_112863.nnic	chr2	+	3168	26	NNC	ENSG00000080345.18	novel	8053	35	NA	NA	6	4990	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_16	27.5593904141583	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	-16	True	NA	NA	False	AATAAA	-9	NA	151409907	151460100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_112864.nic	chr2	+	3192	26	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	25	15522	6	4990	5prime_fragment	FALSE	canonical	0	0	junction_16	32.1790988065235	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	-16	True	NA	NA	False	AATAAA	-9	NA	151409907	151460100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_112867.nic	chr2	+	3596	25	ISM	ENSG00000080345.18	ENST00000430328.6	7992	34	-206	15288	1	4990	5prime_fragment	FALSE	canonical	0	0	junction_15	30.4423122479223	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	-40	True	NA	NA	False	AATAAA	-9	NA	151409883	151460100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_112878.nic	chr2	+	2692	15	ISM	ENSG00000080345.18	ENST00000430328.6	7992	34	-206	32979	1	-12701	5prime_fragment	FALSE	canonical	3	109	junction_12	16.4541725990208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACCTTATGTAAAATTC	-40	True	NA	NA	False	AAAAAG	-4	NA	151409883	151442409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904
transcript_11288.known	chr1	+	14321	8	FSM	ENSG00000117620.15	ENST00000533028.8	14321	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	8.37878759920867	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCAGTAAATATTTTTT	-20	True	NA	NA	False	AATAAA	-16	NA	99969995	100035634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_112880.known	chr2	+	743	7	FSM	ENSG00000080345.18	ENST00000494333.1	743	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	45.7872495594813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTCTTTTATGTAA	-24	True	NA	NA	False	AAGAAA	-33	NA	151409899	151420379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_112882.nic	chr2	+	1609	6	ISM	ENSG00000080345.18	ENST00000430328.6	7992	34	-206	54633	1	376	5prime_fragment	FALSE	canonical	3	137	junction_3	10.3807514178888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTGGGCATATTGGTA	-40	True	NA	NA	False	NA	NA	NA	151409883	151420755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_112884.nic	chr2	-	1757	7	NIC	ENSG00000162980.17	novel	1076	7	NA	NA	-33	390	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	264.186434591601	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGACATTGTGTATCGAT	9162	False	NA	-5	True	AAAAAG	-13	NA	151828525	151802591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_151803325_151806820_151806973_151810377_151810562_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_112885.known	chr2	-	5264	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_5	38.2549343222544	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGCTTGTCTTAACT	9	True	NA	0	True	AATAAA	-22	NA	151828421	151798796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_112886.known	chr2	-	747	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	233.882363593324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCTCATTAGTTTT	17	True	NA	NA	False	AAAACA	-23	NA	151828468	151803102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_112889.known	chr2	-	696	2	FSM	ENSG00000162980.17	ENST00000487723.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTAGACACAGTTTTTG	20	True	NA	NA	False	NA	NA	NA	151828465	151827479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151827841_151828130
transcript_112892.known	chr2	-	5472	14	FSM	ENSG00000115145.10	ENST00000263904.5	5472	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	5.94053371578702	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTATCTGTAATTT	-15	True	NA	-1	True	AATAAA	-17	NA	152175763	152116800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_112893.nic	chr2	+	1877	14	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	-87	30935	-87	-7813	5prime_fragment	FALSE	canonical	3	55	junction_11	7.8189573905065	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTCAAAGAAAAAGAAGAA	NA	False	NA	NA	False	AAGAAA	-3	NA	152335086	152618891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845
transcript_112894.nic	chr2	+	1929	14	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	-87	30883	-87	-7761	5prime_fragment	FALSE	canonical	3	55	junction_11	7.8189573905065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCATGAGCTAGAGAAAC	NA	False	NA	NA	False	AAAAAG	-38	NA	152335086	152618943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845
transcript_112896.nic	chr2	+	1439	7	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	-87	74365	-87	-32192	5prime_fragment	FALSE	canonical	3	65	junction_1	6.04611904907235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTCAGATTTTGTTCTC	NA	False	NA	NA	False	AAAAAG	-30	NA	152335086	152575461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135
transcript_112897.nic	chr2	+	1729	3	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	-87	106077	-87	-63904	5prime_fragment	FALSE	canonical	3	65	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGCAAAGGAGAACAGC	NA	False	NA	NA	False	NA	NA	NA	152335086	152543749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_152335721_152521942_152522027_152542738
transcript_112898.known	chr2	+	5630	26	FSM	ENSG00000157827.20	ENST00000288670.14	5630	26	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_19	21.8805484391959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATATGTTGTAATC	0	True	NA	28	True	AATAAA	-16	NA	152335173	152649826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629655_152629725_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152647795
transcript_112899.known	chr2	-	1843	2	FSM	ENSG00000287085.1	ENST00000670244.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTCTAATTGTTTT	NA	False	NA	NA	False	AATACA	-44	NA	152452891	152450161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_152451865_152452751
transcript_112907.nic	chr2	-	1870	14	NIC	ENSG00000196504.19	novel	1622	14	NA	NA	-236	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_13	274.716788000784	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAAGATCAAAGTACAA	NA	False	NA	-87	True	TATAAA	-28	NA	152718233	152672547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355_152717626_152717830
transcript_112911.known	chr2	+	479	5	FSM	ENSG00000177917.12	ENST00000691702.1	2176	5	917	780	-39	109	multi-exon	FALSE	canonical	3	17	junction_3	366.580397048178	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTGTAATAACAAGAAG	300	False	NA	NA	False	NA	NA	NA	152718918	152759882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152719025_152720532_152720587_152732530_152732581_152734993_152735127_152759746
transcript_112917.known	chr2	+	3242	4	FSM	ENSG00000177917.12	ENST00000326446.10	3242	4	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_2	46.7071253189014	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTTTTGTCATTTGC	1	True	NA	16	True	AATAAA	-28	NA	152718619	152762396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152719025_152720532_152720587_152734993_152735127_152759746
transcript_112920.known	chr2	+	1308	4	FSM	ENSG00000177917.12	ENST00000686839.1	1308	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	314.859051358258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	237	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152717996_152720532_152720587_152734993_152735127_152759746
transcript_112923.known	chr2	-	8048	26	FSM	ENSG00000196504.19	ENST00000410080.8	8048	26	0	0	0	0	multi-exon	TRUE	canonical	3	924	junction_9	91.5549583583543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAAC	21	True	NA	NA	False	GATAAA	-5	NA	152717981	152651592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355
transcript_112924.known	chr2	-	1408	13	FSM	ENSG00000196504.19	ENST00000545856.7	1408	13	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_12	224.234670602028	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAGAAGAA	2	True	NA	-104	True	TATAAA	-11	NA	152717457	152672564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229
transcript_112925.known	chr2	-	1425	1	FSM	ENSG00000177519.4	ENST00000325926.4	1425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGGCCTCCTGGTGG	1	True	NA	-11	True	AATAAA	-19	NA	153478762	153477337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_153477300_153478800
transcript_11293.known	chr1	+	2446	7	FSM	ENSG00000117620.15	ENST00000640178.1	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	25.9449202906636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAGTAAGTGGAGATCA	8	True	NA	NA	False	NA	NA	NA	99970023	100023942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993742_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_112932.known	chr2	-	3472	8	FSM	ENSG00000153234.15	ENST00000339562.9	3472	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.8405855323893	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTTGTCTTCTTTTT	2	True	NA	NA	False	AATAAA	-14	NA	156332721	156324436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_156326001_156326149_156326329_156326717_156326921_156327850_156328015_156328403_156328534_156329322_156330189_156330667_156330792_156332479
transcript_112934.known	chr2	+	6041	17	FSM	ENSG00000115159.16	ENST00000310454.10	6041	17	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	41.7567359835512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	157	False	NA	13	True	NA	NA	NA	156435440	156586403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_156435805_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
transcript_112937.known	chr2	+	5812	17	FSM	ENSG00000115159.16	ENST00000438166.7	5812	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	32.7270912242442	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	6	True	NA	13	True	NA	NA	NA	156436378	156586403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_156436514_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
transcript_112946.known	chr2	-	3332	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	12.4261820363296	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-4	True	NA	-5	True	AATAAA	-17	NA	157876330	157736445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
transcript_112948.known	chr2	-	1160	7	FSM	ENSG00000153237.18	ENST00000409889.1	1160	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	2.08166599946613	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	1431	False	NA	NA	False	AATAAA	-14	NA	158456702	158338592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158345214_158345319_158358448_158358571_158456414
transcript_112949.known	chr2	+	4603	22	FSM	ENSG00000144283.23	ENST00000389759.8	4603	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	32.5248901723837	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCTATTCTTTTTA	-12	True	NA	28	True	AATAAA	-24	NA	158456951	158681429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158676738_158676868_158678580_158678655_158680428
transcript_11296.known	chr1	+	1005	5	FSM	ENSG00000117620.15	ENST00000638876.1	1005	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	30.5163890393343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTTTTGATTTTTACA	30	False	NA	11	True	AATAAA	-22	NA	99970045	100015692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993742_100007033_100007157_100011364_100011534_100015301
transcript_112961.known	chr2	-	1920	11	FSM	ENSG00000196151.11	ENST00000409990.7	1920	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	17.9913868281464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCAGTGTCCTAAGTT	149	False	NA	-8	True	AATAAA	-11	NA	159286592	159235800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286359
transcript_112962.known	chr2	-	1811	11	FSM	ENSG00000196151.11	ENST00000359774.9	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	6.70522184569608	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-18	True	NA	-5	True	AATAAA	-14	NA	159286703	159235797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_112968.known	chr2	-	1535	7	FSM	ENSG00000196151.11	ENST00000358147.8	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	21.4916004264198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-18	True	NA	-5	True	AATAAA	-14	NA	159286703	159235797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_11297.known	chr1	+	2438	6	FSM	ENSG00000117620.15	ENST00000638336.1	2438	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	38.8278250742943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGCTACTG	-10	True	NA	NA	False	NA	NA	NA	99970005	100024014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100022385
transcript_112971.known	chr2	-	1812	11	FSM	ENSG00000196151.11	ENST00000392796.7	1812	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	19.1104683354438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCAGTGTCCTAAGTT	6	True	NA	-8	True	AATAAA	-11	NA	159286552	159235800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286427
transcript_112977.known	chr2	+	1494	2	FSM	ENSG00000224152.2	ENST00000686508.1	3051	2	2	1555	2	1	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTCGTTTTAAAGTT	-8	True	NA	11	True	AATAAA	-19	NA	159615295	159617082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_159615454_159615746
transcript_112979.nic	chr2	+	3542	10	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	-19	-10	combination_of_known_junctions	FALSE	canonical	3	382	junction_1	146.286966416048	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTTGAAATGTTT	-31	True	NA	19	True	AATAAA	-16	NA	159712479	159768573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_11298.known	chr1	-	3848	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_15	8.53828693298603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTGAAAATCAAGTACT	4	True	NA	-35	True	AATAAA	-18	NA	100132930	100083569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_112981.known	chr2	-	1402	2	FSM	ENSG00000054219.11	ENST00000492955.1	1402	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTTAGCCATTTTC	-33	True	NA	NA	False	ACTAAA	-22	NA	159904749	159902364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159903606_159904588
transcript_112982.known	chr2	-	6932	35	FSM	ENSG00000054219.11	ENST00000263636.5	6932	35	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.96448332417752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGAGTTGATCCTTCT	-40	True	NA	NA	False	AATAAA	-30	NA	159904756	159803354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159805223_159806972_159807141_159808448_159808572_159810525_159810676_159815404_159815574_159816805_159817033_159819725_159819921_159831669_159831787_159834043_159834212_159835479_159835646_159840728_159840956_159842244_159842375_159849979_159850141_159850361_159850468_159852200_159852341_159853272_159853353_159853629_159853698_159854359_159854536_159854903_159854940_159858361_159858477_159860820_159860890_159864838_159864921_159872450_159872594_159875443_159875644_159878323_159878494_159878632_159878722_159879258_159879370_159881082_159881241_159882123_159882316_159885152_159885294_159886419_159886531_159890212_159890378_159893913_159894085_159898687_159899060_159904588
transcript_112989.nic	chr2	-	2094	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_14	113.519327671996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	-36	True	NA	NA	False	AAAAAG	-18	NA	160493876	160274459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_112991.nic	chr2	-	2074	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_14	114.952430267871	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	-25	True	NA	NA	False	AAAAAG	-18	NA	160493865	160274459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_112999.known	chr2	-	4286	14	FSM	ENSG00000153250.21	ENST00000348849.8	4286	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_13	94.3653983320521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	33	True	NA	-11	True	AATAAA	-18	NA	160493807	160272150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_113.known	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4001_+_0_4000
transcript_113001.nic	chr2	-	1998	14	NIC	ENSG00000153250.21	novel	1550	14	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	96.51863112294	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	3	True	NA	NA	False	AAAAAG	-18	NA	160493837	160274459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_113007.nic	chr2	+	2199	8	NIC	ENSG00000136560.14	novel	2155	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	36.0175694088656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTCCTTTGTTCCT	9666	False	NA	24	True	ATTAAA	-28	NA	161160281	161236187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_113008.known	chr2	+	2098	8	FSM	ENSG00000136560.14	ENST00000392749.7	2098	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	23.3019224922909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGAAGGAATCACATT	3	True	NA	67	True	AGTAAA	-17	NA	161160427	161236230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_113011.known	chr2	+	550	4	FSM	ENSG00000136560.14	ENST00000440506.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	53.8537113133554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTACCAAAGGTAGACAT	0	True	NA	NA	False	GATAAA	-25	NA	161160298	161204781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674
transcript_113012.nic	chr2	+	713	4	ISM	ENSG00000136560.14	ENST00000432692.6	576	7	-92	19661	-8	0	5prime_fragment	FALSE	canonical	3	89	junction_1	27.7888866675551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	-5	True	NA	NA	False	AATAAA	-19	NA	161160335	161204979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674
transcript_113014.known	chr2	+	2333	2	FSM	ENSG00000227403.3	ENST00000439050.1	2333	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCATTCTCTATTCATC	-7	True	NA	11	True	ATTAAA	-16	NA	161244738	161249050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_161244896_161246874
transcript_113017.known	chr2	+	1567	12	FSM	ENSG00000115233.12	ENST00000409682.8	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_5	89.2393012778674	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTGAGATCTTTTTG	-30	True	NA	14	True	AATAAA	-17	NA	161308424	161411717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_161308605_161316436_161316570_161318821_161318874_161367477_161367550_161367783_161367904_161370106_161370178_161371171_161371323_161385463_161385572_161391103_161391179_161395077_161395204_161408836_161408900_161411301
transcript_113018.known	chr2	-	3749	26	FSM	ENSG00000197635.11	ENST00000676810.1	3749	26	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_24	6.38172390502754	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTGTGTCTTGAA	5	True	NA	NA	False	AATAAA	-22	NA	162074394	161992244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_161993385_161994960_161995035_161995299_161995373_162005744_162005810_162008561_162008662_162009240_162009296_162011792_162011988_162014395_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047499_162073398_162073487_162073975
transcript_113019.known	chr2	+	3651	8	FSM	ENSG00000115271.11	ENST00000437150.7	3651	8	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_6	48.5024720598689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTTTGTCTTTTTAC	-1	True	NA	NA	False	AATAAA	-17	NA	162344131	162363123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_11302.nnic	chr1	+	2936	13	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	255.586729680727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	-10	True	NA	29	True	AATAAA	-34	NA	100038094	100083377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_100038317_100043072_100043230_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_113023.known	chr2	+	1808	7	FSM	ENSG00000115271.11	ENST00000487445.6	1808	7	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	46.0341057140126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCCTGCTCTGAATC	26	False	NA	NA	False	NA	NA	NA	162344158	162360971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359553_162360216
transcript_113026.known	chr2	-	2415	14	FSM	ENSG00000115290.10	ENST00000263915.8	2415	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	29.8663690461362	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTATTGTACCCATTA	1	True	NA	NA	False	ATTAAA	-20	NA	164621482	164492416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508551_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
transcript_113027.known	chr2	-	1983	14	FSM	ENSG00000115290.10	ENST00000488342.5	1983	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	36.1489358367598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTTCTTGTGTGAT	1046	False	NA	-8	True	ATTAAA	-19	NA	164621392	164492811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508604_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
transcript_11303.known	chr1	+	2779	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_6	46.3520484627618	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	-10	True	NA	29	True	AATAAA	-34	NA	100038094	100083377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_113031.known	chr2	+	11737	7	FSM	ENSG00000178662.16	ENST00000651982.1	11737	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	7.99478997014097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCATTTCTGTT	-1	True	NA	11	True	AGTAAA	-19	NA	165469697	165689407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165595042_165595214_165657760_165658021_165676311_165676609_165678700
transcript_113032.known	chr2	+	499	4	FSM	ENSG00000178662.16	ENST00000464503.1	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTATTTGTGGATTT	7	True	NA	NA	False	AATAAA	-18	NA	165469705	165566981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165566776
transcript_113033.known	chr2	-	3436	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	16.0860187740783	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATGATGTTTTAAAAAA	1	True	NA	NA	False	GATAAA	-18	NA	165794247	165747587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
transcript_113038.known	chr2	-	5415	29	FSM	ENSG00000123607.16	ENST00000243344.8	5415	29	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_21	17.1994230444287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGCTTTTTATTAAAT	20	True	NA	-3	True	AATAAA	-17	NA	165953776	165873361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_113041.known	chr2	-	1844	11	FSM	ENSG00000123607.16	ENST00000464374.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	19.7101496696499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGGACCATT	51	False	NA	NA	False	NA	NA	NA	165953745	165928716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_113044.nic	chr2	-	498	2	ISM	ENSG00000169432.19	ENST00000472119.2	2283	7	-23	9574	-23	-5127	5prime_fragment	FALSE	canonical	2	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGATGAAGAAGCCCC	NA	False	NA	NA	False	AAGAAA	-29	NA	166376024	166311636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_166311807_166375696
transcript_113051.known	chr2	+	6804	10	FSM	ENSG00000172292.15	ENST00000305747.11	6804	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	14.869805348797	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGTGCCCTTTACTGT	14	True	NA	19	True	AATAAA	-20	NA	168456271	168775134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_168456619_168547595_168547702_168561191_168561323_168630984_168631043_168691033_168691085_168694958_168695052_168715000_168715130_168717871_168717979_168765591_168765749_168769509
transcript_113052.known	chr2	-	1342	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	23.7954243967663	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-16	True	NA	-1	True	AATAAA	-23	NA	168890430	168870890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
transcript_113057.known	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	78.4370604305107	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	3	True	NA	0	True	AATAAA	-16	NA	169573865	169528507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_113060.known	chr2	-	2791	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	91.0421581258541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-23	True	NA	-30	True	AATAAA	-17	NA	169573832	169529754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_113068.known	chr2	-	1045	4	FSM	ENSG00000138399.18	ENST00000438035.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_2	66.9444213923427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-3	True	NA	-7	True	AGTAAA	-19	NA	169573812	169560529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169560786_169563224_169563351_169571652_169572172_169573668
transcript_113074.known	chr2	+	6357	14	FSM	ENSG00000138398.17	ENST00000260970.8	6357	14	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	48.9780774531414	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	-8	True	NA	15	True	AATAAA	-16	NA	169584350	169641406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_113079.known	chr2	+	6453	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	96.7132649707463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATACTATAATAAACAG	49	False	NA	-2	True	ATTAAA	-3	NA	169584646	169641389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_113088.nic	chr2	+	966	10	ISM	ENSG00000138398.17	ENST00000414307.6	1507	12	-8	2553	-8	82	5prime_fragment	FALSE	canonical	3	351	junction_1	41.6727402980728	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCGAAAGAAAAGCAAGAAGA	NA	False	NA	NA	False	AAAAAG	-45	NA	169584333	169630966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_113090.nic	chr2	+	1143	10	ISM	ENSG00000138398.17	ENST00000678638.1	2661	15	-234	7043	-2	82	5prime_fragment	FALSE	canonical	3	139	junction_1	105.41218333315	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCGAAAGAAAAGCAAGAAGA	161	False	NA	NA	False	AAAAAG	-45	NA	169584565	169630966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_113092.nic	chr2	+	777	9	ISM	ENSG00000138398.17	ENST00000414307.6	1507	12	-8	18791	-8	3506	5prime_fragment	FALSE	canonical	3	351	junction_1	42.1809717171143	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAGTACATATTTCTG	NA	False	NA	28	True	NA	NA	NA	169584333	169614728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584
transcript_113094.nic	chr2	+	954	9	ISM	ENSG00000138398.17	ENST00000678638.1	2661	15	-234	23281	-2	3506	5prime_fragment	FALSE	canonical	3	139	junction_1	109.61231397521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAGTACATATTTCTG	161	False	NA	28	True	NA	NA	NA	169584565	169614728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584
transcript_113097.known	chr2	+	1121	4	FSM	ENSG00000144362.12	ENST00000359744.8	1121	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	9.41629792788369	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	-14	True	NA	8	True	AATAAA	-19	NA	169694468	169701708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169700945
transcript_113098.known	chr2	+	4081	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	31.5066130624456	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	-23	True	NA	13	True	AATAAA	-15	NA	169733831	169751878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
transcript_113099.nic	chr2	+	620	2	ISM	ENSG00000213160.10	ENST00000392647.7	4081	4	-125	16627	-125	-14249	5prime_fragment	FALSE	canonical	3	406	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGGCATCCACCATGA	NA	False	NA	NA	False	AATAAA	-7	NA	169733706	169735251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169734088_169735012
transcript_113102.known	chr2	+	1650	12	FSM	ENSG00000138385.16	ENST00000260956.9	1650	12	0	0	0	0	multi-exon	FALSE	canonical	3	2756	junction_6	250.638259629456	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	2	True	NA	39	True	AATAAA	-28	NA	169798870	169812064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_113103.known	chr2	+	1782	12	FSM	ENSG00000138385.16	ENST00000409333.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	898.630105280088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	364	False	NA	39	True	AATAAA	-28	NA	169799278	169812064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169799517_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_113108.nic	chr2	+	1075	10	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-24	1081	-24	-61	5prime_fragment	FALSE	canonical	3	2756	junction_6	217.575529669839	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCACTGAAGAAAATAAT	-22	True	NA	56	True	NA	NA	NA	169798846	169810983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857
transcript_113117.known	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_7	241.951504670347	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-27	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_113118.known	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_7	340.293750654775	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-33	False	NA	-18	True	AATAAA	-17	NA	169824931	169811756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_113121.nic	chr2	+	798	7	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-83	3537	-83	-139	5prime_fragment	FALSE	canonical	3	2756	junction_6	216.740756563124	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAAGCTAAATTAAGAGC	NA	False	NA	NA	False	AATAAA	-1	NA	169798787	169808527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481
transcript_113125.known	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_6	233.218781404929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	24	True	NA	-25	True	TTTAAA	-6	NA	169824874	169811813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_113129.nic	chr2	+	752	6	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-83	4993	-83	0	5prime_fragment	FALSE	canonical	3	2906	junction_5	169.35831836671	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTTTGCTGATGT	NA	False	NA	2	True	AAGAAA	-23	NA	169798787	169807071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970
transcript_113133.known	chr2	-	472	6	FSM	ENSG00000138382.15	ENST00000409340.5	472	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	384.196616330753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	84	False	NA	-18	True	AATAAA	-17	NA	169824814	169811756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169824488_169824641_169824781
transcript_113139.known	chr2	+	545	5	FSM	ENSG00000138385.16	ENST00000417292.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1256.1795253864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCAGAAGTACAAAGAAAC	10	True	NA	-39	True	AAGAAA	-16	NA	169798878	169807030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169798977_169805473_169805578_169805664_169805840_169806784_169806893_169806970
transcript_11314.nic	chr1	-	823	6	ISM	ENSG00000156876.10	ENST00000462159.1	3972	16	-133	36831	-133	-36824	5prime_fragment	FALSE	canonical	3	59	junction_4	9.59166304662544	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCAAATTTCATTTTG	8	True	NA	NA	False	NA	NA	NA	100133088	100120393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_113141.known	chr2	+	619	4	FSM	ENSG00000138385.16	ENST00000461708.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	3126	junction_3	135.816870167966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCACGTTGGAGTGCAG	11	True	NA	NA	False	NA	NA	NA	169798879	169806007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664
transcript_113149.known	chr2	-	1001	7	FSM	ENSG00000138382.15	ENST00000260953.10	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	201.490005266321	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-7	True	NA	-18	True	AATAAA	-17	NA	169824905	169811756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488
transcript_113152.known	chr2	-	2117	1	FSM	ENSG00000222033.1	ENST00000409786.1	2117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCAAAGTACAATATTTA	NA	False	NA	-15	True	ATTAAA	-15	NA	170714567	170712450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_170712400_170714600
transcript_113153.known	chr2	+	2047	2	FSM	ENSG00000204335.4	ENST00000375281.4	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGAGGCTTCTTTGGTT	6	True	NA	129	True	NA	NA	NA	170715336	170718078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170715564_170716258
transcript_113155.known	chr2	+	257	2	FSM	ENSG00000204335.4	ENST00000487037.1	257	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCCGCAGAAGACGCACC	15	False	NA	NA	False	GGGGCT	-1	NA	170716041	170716488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170716069_170716258
transcript_113158.known	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	21	junction_1	27.956315128349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	238	False	NA	9	True	ATTAAA	-22	NA	170771337	170778584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
transcript_11316.known	chr1	-	3972	16	FSM	ENSG00000156876.10	ENST00000462159.1	3972	16	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_14	8.29832647117611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAGTACTTCAAAAC	-21	True	NA	-28	True	AATAAA	-25	NA	100132955	100083562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_113160.known	chr2	+	1327	4	FSM	ENSG00000239467.7	ENST00000662201.2	1444	4	117	0	-21	0	multi-exon	FALSE	canonical	3	29	junction_1	24.5356882927706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	-17	True	NA	4	True	AATAAA	-15	NA	170771026	170778729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643
transcript_113161.known	chr2	+	1291	3	FSM	ENSG00000239467.7	ENST00000662915.2	1411	3	118	2	-20	0	multi-exon	FALSE	canonical	3	13	junction_1	38	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTTGTCTTTGAGGG	-16	True	NA	0	True	AATAAA	-11	NA	170771027	170778725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170771188_170777376_170777426_170777643
transcript_113164.known	chr2	+	1029	7	FSM	ENSG00000128683.14	ENST00000344257.9	1029	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.26691175145591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGATCCTTCAGGATC	2	True	NA	7	True	AATAAA	-18	NA	170816911	170842759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170842568
transcript_113165.known	chr2	+	3279	17	FSM	ENSG00000128683.14	ENST00000358196.8	3279	17	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	2.31756202721739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCTAGTTTGTGTTT	-1	True	NA	NA	False	AATAAA	-34	NA	170816886	170861151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170844044_170844158_170845505_170845622_170845705_170845786_170846008_170846064_170847675_170847793_170849285_170849351_170852713_170852793_170853872_170854023_170857017_170857126_170858803_170858894_170859708
transcript_11317.known	chr1	+	3130	11	FSM	ENSG00000122435.11	ENST00000370141.8	3128	11	0	-2	0	2	multi-exon	FALSE	canonical	3	36	junction_5	10.5470374987482	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	7	True	NA	12	True	AATAAA	-20	NA	100133162	100150498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_113174.known	chr2	+	2447	10	FSM	ENSG00000115806.13	ENST00000234160.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_9	91.4497770822601	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGCTTCCTCAGTTA	14	True	NA	14	True	ATTAAA	-29	NA	170929252	170967130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435_170956560_170961662_170961750_170962838_170962947_170965789
transcript_113185.known	chr2	+	951	8	FSM	ENSG00000115806.13	ENST00000493692.5	951	8	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_5	359.004121402072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTGCAGCAAGCTCA	14	True	NA	NA	False	NA	NA	NA	170929252	170965891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170961662_170961750_170962838_170962947_170965789
transcript_113188.known	chr2	-	5723	21	FSM	ENSG00000198586.14	ENST00000431350.7	5723	21	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_18	13.3261960063628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTATTAGCTGTGTT	48	True	NA	-8	True	ATTAAA	-20	NA	171160893	170990822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_113193.nic	chr2	-	1554	9	ISM	ENSG00000198586.14	ENST00000409443.6	2783	21	-308	53409	-308	3584	5prime_fragment	FALSE	canonical	3	82	junction_6	13.6238531627436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACTTGAAAAATACAAAGA	NA	False	NA	NA	False	AATAGA	-14	NA	171161208	171050132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_113206.known	chr2	-	9770	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	24.0744729311688	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	26	True	NA	NA	False	ATTAAA	-20	NA	171433990	171315745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
transcript_113207.known	chr2	-	9791	10	FSM	ENSG00000123600.21	ENST00000612742.5	9791	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	24.588966711731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	171434802	171315745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
transcript_113217.nnic	chr2	-	2113	9	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	34.1227105459106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23	True	NA	NA	False	NA	NA	NA	171433993	171323250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171433882
transcript_113218.nic	chr2	-	2119	9	NIC	ENSG00000123600.21	novel	9791	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	30.3600786395556	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	171434790	171323250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171434673
transcript_113228.known	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	46.8852025933793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	NA	False	NA	7	True	NA	NA	NA	171327065	171323900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
transcript_113235.known	chr2	+	5853	14	FSM	ENSG00000115827.14	ENST00000375255.8	5853	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	26.9489985103354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGTGAACATGTGTC	0	True	NA	17	True	AATAAA	-25	NA	171434225	171485052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171458371_171458478_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_113240.known	chr2	+	5623	12	FSM	ENSG00000115827.14	ENST00000539783.5	5623	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	36.2149231830888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTTTTGTGAACATG	25	True	NA	13	True	AATAAA	-21	NA	171434250	171485048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171458371_171458478_171468887_171469031_171477986_171478071_171480037_171480194_171480973
transcript_113242.known	chr2	-	447	1	FSM	ENSG00000233762.3	ENST00000433675.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	20	False	NA	-49	True	NA	NA	NA	171517716	171517269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171517300_171517700
transcript_113243.known	chr2	+	4235	4	FSM	ENSG00000071967.12	ENST00000321348.9	4235	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTGTGTTATCAAT	-4	True	NA	4	True	AATAAA	-14	NA	171522473	171558129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171522739_171541584_171541794_171553345_171553501_171554523
transcript_113247.known	chr2	+	763	3	FSM	ENSG00000071967.12	ENST00000468308.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGCCATGTTGCCCGGG	100	False	NA	NA	False	NA	NA	NA	171522347	171551140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171522739_171541584_171541794_171550977
transcript_113248.known	chr2	+	4354	18	FSM	ENSG00000077380.16	ENST00000397119.8	4354	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	287.687173913962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGTATTATTTAAAC	-7	True	NA	NA	False	AATAAA	-16	NA	171687468	171750158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_113249.known	chr2	+	2552	18	FSM	ENSG00000077380.16	ENST00000409453.5	2552	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	305.504891539113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTTTTACTCCTTAC	24	True	NA	14	True	AATAAA	-26	NA	171687775	171748420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_113251.known	chr2	+	2196	17	FSM	ENSG00000077380.16	ENST00000409317.5	2196	17	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	218.449615186203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGCAGCAAGGAAACTT	177	False	NA	19	True	ATTAAA	-29	NA	171687707	171748011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_113252.known	chr2	+	2494	16	FSM	ENSG00000077380.16	ENST00000508530.5	2494	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_15	190.381324947824	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	25	False	NA	5	True	AATAAA	-17	NA	171687500	171748411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_113253.known	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	70.1136854607493	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	141	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_113255.known	chr2	+	980	8	FSM	ENSG00000077380.16	ENST00000452242.5	980	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	270.331995433582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTTTAGTTGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	171687408	171726081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918
transcript_113257.known	chr2	+	2589	16	FSM	ENSG00000077380.16	ENST00000340296.8	2589	16	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	104.211750243861	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	NA	False	NA	5	True	AATAAA	-17	NA	171687408	171748411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_113261.known	chr2	+	581	3	FSM	ENSG00000077380.16	ENST00000471482.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	150.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAGTAATTATTAACAT	-4	True	NA	NA	False	NA	NA	NA	171687471	171693084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776
transcript_113263.nic	chr2	+	273	2	ISM	ENSG00000077380.16	ENST00000471482.5	581	3	-3	2824	0	-2824	5prime_fragment	FALSE	canonical	3	363	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	-7	True	NA	55	True	AAGAAA	-12	NA	171687468	171690260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_171687628_171690146
transcript_113264.nic	chr2	+	260	2	ISM	ENSG00000077380.16	ENST00000411953.5	582	6	-26	25089	-15	-2823	5prime_fragment	FALSE	canonical	3	557	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTGATTTTTTTG	-23	True	NA	56	True	AAAAAG	-1	NA	171687728	171690261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_171687874_171690146
transcript_113265.known	chr2	-	3936	18	FSM	ENSG00000115840.14	ENST00000422440.7	3936	18	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	7.31448768566919	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAGTATTTCATTGTAT	-5	True	NA	-8	True	TATAAA	-18	NA	171894244	171783404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171785476_171787570_171787662_171787788_171787948_171791450_171791590_171793626_171793768_171809605_171809687_171810223_171810277_171813338_171813498_171815120_171815203_171826797_171826883_171833962_171834057_171834726_171834866_171837120_171837268_171844368_171844509_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_113269.nnic	chr2	+	1767	12	NNC	ENSG00000128708.13	novel	1634	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	339.880192795263	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAATGTGTGATGATA	-8	True	NA	14	True	AATAAA	-14	NA	171922460	171983623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_171922508_171922921_171923118_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_11327.known	chr1	-	1933	12	FSM	ENSG00000137992.15	ENST00000681780.1	1933	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	26.2379448902942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGCCGGGCATGGTG	-3	True	NA	NA	False	NA	NA	NA	100249833	100195970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100248898_100249086_100249769
transcript_113271.known	chr2	+	1634	11	FSM	ENSG00000128708.13	ENST00000264108.5	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	128.548978992445	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTCCACACTTTGC	-8	True	NA	16	True	AATAAA	-20	NA	171922460	171983686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171922508_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_113275.known	chr2	+	1567	10	FSM	ENSG00000128708.13	ENST00000412731.5	1567	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	287.380291771662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTCCTTCCACACT	-21	True	NA	12	True	AATAAA	-16	NA	171922447	171983682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171922508_171925536_171925642_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_113276.known	chr2	+	3049	10	FSM	ENSG00000172878.14	ENST00000315796.5	3049	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	12.4672410245985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGGTGTATATATAT	-1	True	NA	5	True	ATTAAA	-15	NA	171999952	172082430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172000010_172061497_172061656_172063710_172063861_172065603_172065753_172066263_172066307_172070906_172071071_172077796_172077895_172079214_172079263_172080127_172080207_172080327
transcript_11328.known	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	9.27415764368926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-4	True	NA	0	True	AATAAA	-20	NA	100249834	100186918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_113280.known	chr2	+	929	3	FSM	ENSG00000172878.14	ENST00000493035.5	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGACCAGCCTGGCCAA	-11	True	NA	NA	False	NA	NA	NA	171999942	172064414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172000010_172061497_172061656_172063710
transcript_113282.known	chr2	+	552	2	FSM	ENSG00000172878.14	ENST00000493742.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGATTCAAAAGAGATTAC	1	True	NA	NA	False	TATAAA	-6	NA	171999954	172061994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172000010_172061497
transcript_113283.known	chr2	-	2454	3	FSM	ENSG00000115844.11	ENST00000234198.9	2454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCGCTTTTTTCTTGG	1	True	NA	NA	False	AATAAA	-18	NA	172102900	172099437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_172100945_172101461_172101647_172102138
transcript_113285.nic	chr2	+	5370	25	NIC	ENSG00000091409.16	novel	5488	26	NA	NA	3	-67	combination_of_known_junctions	FALSE	canonical	3	83	junction_20	120.809415736339	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTTTCGTAACAC	0	True	NA	8	True	AATAAA	-14	NA	172427588	172506191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489614_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172504090
transcript_113287.known	chr2	+	5686	25	FSM	ENSG00000091409.16	ENST00000409080.6	5686	25	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_9	59.9867896336815	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGTTGTCTTTGGACT	-3	True	NA	27	True	ATTAAA	-32	NA	172427585	172506459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172504090
transcript_113294.nic	chr2	+	3032	21	ISM	ENSG00000091409.16	ENST00000684293.1	5816	26	-126	15412	42	-207	5prime_fragment	FALSE	canonical	3	491	junction_9	48.8098350745011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGGAAATTACTGAAAAACA	123	False	NA	NA	False	AAGAAA	-5	NA	172427459	172491047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023
transcript_113295.nic	chr2	+	2976	21	ISM	ENSG00000091409.16	ENST00000684293.1	5816	26	-7	15349	-7	-144	5prime_fragment	FALSE	canonical	3	491	junction_9	48.8098350745011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGACTCTTGTAAGTAT	-10	True	NA	NA	False	AAGAAA	-2	NA	172427578	172491110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023
transcript_113308.nic	chr2	+	1826	12	ISM	ENSG00000091409.16	ENST00000264107.12	5488	26	-115	21436	-33	-5106	5prime_fragment	FALSE	canonical	3	491	junction_9	56.8410862924794	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTATCCTCAAGAGT	-4	True	NA	NA	False	AAAAAG	-12	NA	172427552	172484822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781
transcript_113309.known	chr2	+	1515	12	FSM	ENSG00000152256.14	ENST00000392571.6	1515	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	45.1323123696838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACTTGGGACATCGGAA	9	False	NA	-60	True	NA	NA	NA	172556006	172595969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172562740_172562801_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828
transcript_11331.known	chr1	-	2663	3	FSM	ENSG00000224616.4	ENST00000666916.1	2663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAGTAACAAAATAGAAA	-1	True	NA	NA	False	ATTAAA	-25	NA	100266134	100262804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100265248_100265828_100265918_100266003
transcript_113312.known	chr2	+	2990	12	FSM	ENSG00000152256.14	ENST00000410055.5	2990	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	33.9895462782066	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCACAGTATAACTGTA	-42	True	NA	7	True	AATAAA	-17	NA	172556050	172599137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828_172596024_172597612
transcript_113315.known	chr2	+	14072	11	FSM	ENSG00000152256.14	ENST00000282077.8	14072	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	20.8086520466848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCACTCATTTTTG	-3	True	NA	20	True	ATTAAA	-21	NA	172556089	172608669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828
transcript_113324.known	chr2	-	950	4	FSM	ENSG00000225205.5	ENST00000442417.5	950	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	15.06283137026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATATATACACCTACTA	NA	False	NA	NA	False	NA	NA	NA	172556529	172480839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_172481022_172495374_172495517_172512333_172512519_172556088
transcript_113325.nnic	chr2	-	1349	4	NNC	ENSG00000225205.5	novel	950	4	NA	NA	16	-10235	intron_retention	FALSE	canonical	3	13	junction_1	12.2836838484589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATCTGTTTTTCAGTAA	NA	False	NA	-4	True	AATAAA	-18	NA	172556513	172491074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_172491672_172495374_172495517_172512333_172512519_172556088
transcript_113327.nic	chr2	+	1023	3	ISM	ENSG00000091409.16	ENST00000458358.5	3261	25	-232	36288	-29	-6148	5prime_fragment	FALSE	canonical	3	644	junction_1	30.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGTAATCACGTAATC	0	True	NA	NA	False	AAAAAG	-10	NA	172427556	172467964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480
transcript_113330.known	chr2	-	1397	3	FSM	ENSG00000225205.5	ENST00000450443.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGAAGTGCATCACTAC	NA	False	NA	-86	True	AATAAA	-20	NA	172556596	172503438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_172504143_172512333_172512519_172556088
transcript_113334.known	chr2	-	474	2	FSM	ENSG00000225205.5	ENST00000436922.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTAACCTCTCTGAGCC	43	False	NA	NA	False	NA	NA	NA	172556407	172555425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_172555581_172556088
transcript_113336.known	chr2	+	3859	20	FSM	ENSG00000091436.17	ENST00000375213.8	3859	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	23.2321775135729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTTCAGCATTCACT	-18	True	NA	11	True	AATAAA	-21	NA	173075845	173268015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
transcript_113337.known	chr2	+	2572	20	FSM	ENSG00000091436.17	ENST00000409176.6	2572	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	25.0597070946089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	176	False	NA	NA	False	NA	NA	NA	173075713	173266783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173075816_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
transcript_113339.known	chr2	+	7179	12	FSM	ENSG00000091436.17	ENST00000338983.7	7179	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	13.0959586220866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTACGTGTTGCT	-22	True	NA	NA	False	AATAAA	-16	NA	173075841	173227146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173221149
transcript_11334.known	chr1	+	1534	12	FSM	ENSG00000137996.13	ENST00000260563.4	1534	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	84.8868960674552	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATACATTTTTCTTTT	22	True	NA	NA	False	AATAAA	-18	NA	100266248	100291771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100266421_100266523_100266625_100267499_100267539_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_113342.known	chr2	+	4010	10	FSM	ENSG00000091436.17	ENST00000476618.5	4010	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	9.32142096940638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGGCTGTGCAAAAAT	4	True	NA	NA	False	AAAAAG	-9	NA	173075867	173212825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728
transcript_113347.known	chr2	+	2778	10	FSM	ENSG00000144354.14	ENST00000306721.8	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	215.732344455912	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCTTTTGACTGAAGT	9	True	NA	18	True	AATAAA	-27	NA	173354871	173368997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_113351.known	chr2	+	1369	10	FSM	ENSG00000144354.14	ENST00000410101.7	1369	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	273.689244343171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTTTTCACTGAAACC	9	True	NA	NA	False	NA	NA	NA	173354871	173367720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173359386_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_113357.nic	chr2	+	3277	9	NIC	ENSG00000144354.14	novel	2500	9	NA	NA	18	0	intron_retention	FALSE	canonical	3	80	junction_4	243.56053533978	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	-25	True	NA	18	True	AATAAA	-14	NA	173354837	173368904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173363999_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_113360.known	chr2	+	2500	9	FSM	ENSG00000144354.14	ENST00000347703.7	2500	9	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_2	105.603030259553	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	NA	False	NA	18	True	AATAAA	-14	NA	173354819	173368904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_113364.known	chr2	+	2943	8	FSM	ENSG00000144354.14	ENST00000496441.5	2943	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_2	94.3305088397131	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTGATATTAAAAACTA	9	True	NA	1	True	AATAAA	-22	NA	173354871	173368500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_113367.nic	chr2	+	1881	6	NIC	ENSG00000144354.14	novel	928	7	NA	NA	-352	-188	combination_of_known_junctions	FALSE	canonical	3	80	junction_5	316.449932848784	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCTCTCTTTACTTAAA	NA	False	NA	NA	False	AAAAAG	-7	NA	173354467	173364685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173363999
transcript_113370.nic	chr2	+	1615	5	ISM	ENSG00000144354.14	ENST00000306721.8	2778	10	-34	4312	18	-188	5prime_fragment	FALSE	canonical	3	255	junction_2	280.296606294118	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCTCTCTTTACTTAAA	-25	True	NA	NA	False	AAAAAG	-7	NA	173354837	173364685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817
transcript_113373.nic	chr2	+	1378	4	ISM	ENSG00000144354.14	ENST00000496441.5	2943	8	-34	3815	18	-188	5prime_fragment	FALSE	canonical	3	572	junction_2	135.907648382602	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCTCTCTTTACTTAAA	-25	True	NA	NA	False	AAAAAG	-7	NA	173354837	173364685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817
transcript_113375.known	chr2	-	11714	7	FSM	ENSG00000172845.18	ENST00000310015.12	11714	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	126.547421941342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTACACATCCTTTATTG	-5	True	NA	-5	True	AATAAA	-19	NA	173965373	173900774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963884_173964404_173964554_173965164
transcript_113377.known	chr2	-	3937	5	FSM	ENSG00000172845.18	ENST00000418194.7	3937	5	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	27.9150497044157	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTATTCCTATGCA	-15	True	NA	0	True	AATAAA	-23	NA	173964219	173908529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760
transcript_11338.known	chr1	+	2526	11	FSM	ENSG00000137996.13	ENST00000370128.9	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	24.1669195389069	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCATTATTCTCTG	-11	True	NA	21	True	AATAAA	-21	NA	100266215	100292769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100266421_100266523_100266625_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_113385.known	chr2	-	4251	11	FSM	ENSG00000138430.16	ENST00000284719.8	4251	11	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_10	67.8810724723763	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGACTTTTTTGT	1	True	NA	-6	True	AATAAA	-15	NA	174248532	174072446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_113387.known	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	259.493999550027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-10	True	NA	-3	True	AATAAA	-16	NA	174248599	174075007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
transcript_113391.known	chr2	-	1918	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	89.1079245758884	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-31	True	NA	-5	True	AATAAA	-17	NA	174395712	174348021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
transcript_113397.known	chr2	+	943	4	FSM	ENSG00000144306.15	ENST00000549848.5	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	15.369522511198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATATGGTCAGCTAAT	NA	False	NA	NA	False	NA	NA	NA	174410081	174427895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174410504_174422884_174423048_174424474_174424650_174427712
transcript_113398.known	chr2	+	658	3	FSM	ENSG00000144306.15	ENST00000475928.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATTAAACTACGTATA	NA	False	NA	NA	False	NA	NA	NA	174410343	174428035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174410504_174424474_174424650_174427712
transcript_113400.known	chr2	-	2003	8	FSM	ENSG00000115935.18	ENST00000359761.7	2003	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	6.24989795835067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTCCCTGAGAGCT	8	True	NA	-43	True	NA	NA	NA	174682883	174562203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174562603_174567069_174567184_174567860_174568074_174571675_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_113406.known	chr2	-	1772	5	FSM	ENSG00000115935.18	ENST00000409415.7	1772	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	5.71729831301464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTCTTTGTAATCT	20	True	NA	-1	True	ATTAAA	-20	NA	174682871	174571168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_113407.known	chr2	-	553	3	FSM	ENSG00000115935.18	ENST00000487291.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-25	True	NA	NA	False	NA	NA	NA	174682916	174676336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174676667_174677044_174677125_174682773
transcript_113408.known	chr2	+	411	1	FSM	ENSG00000235655.3	ENST00000369387.4	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	84	False	NA	NA	False	NA	NA	NA	174719907	174720318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174719900_174720300
transcript_11341.known	chr1	+	4231	16	FSM	ENSG00000079335.20	ENST00000336454.5	4231	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	7.29261422414639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTGGTGTTTATA	21	True	NA	11	True	AATAAA	-24	NA	100352505	100520277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291_100484452_100494817_100494931_100496001_100496050_100498084_100498208_100498928_100499263_100518250
transcript_11342.known	chr1	+	2446	15	FSM	ENSG00000079335.20	ENST00000361544.11	2446	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	7.25518815069884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTCCTTCCTTCTTTT	-18	True	NA	NA	False	AGTAAA	-19	NA	100352466	100499465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291_100484452_100494817_100494931_100496001_100496050_100498084_100498208_100498928
transcript_113423.nic	chr2	-	2444	15	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	92.2533114277626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGCATTTTCTGTTAA	31	False	NA	-23	True	AATAAA	-28	NA	175005406	174799499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174940815_174940895_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_113426.nic	chr2	-	2500	14	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_7	62.1534653453681	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATAGCTTACTTTTTT	1	True	NA	-38	True	AATAAA	-4	NA	175005436	174799394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_113430.nic	chr2	-	2552	14	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-212	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_7	62.1534653453681	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGCATTTTCTGTTAA	NA	False	NA	-23	True	AATAAA	-28	NA	175005593	174799499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_113436.known	chr2	-	1761	13	FSM	ENSG00000128656.15	ENST00000409156.7	1761	13	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_6	89.0462972590975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGTTGTTTTTGT	12	True	NA	-12	True	ATTAAA	-7	NA	175005369	174799988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_113441.nic	chr2	-	2091	13	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	83.9464114777993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGCATTTTCTGTTAA	16	False	NA	-23	True	AATAAA	-28	NA	175005421	174799499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_113447.known	chr2	-	1852	12	FSM	ENSG00000128656.15	ENST00000651501.1	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	110.894932032141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTCTGTTAAATTAT	17	True	NA	-18	True	AATAAA	-33	NA	175005364	174799494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175005205
transcript_113450.nic	chr2	-	1794	3	ISM	ENSG00000128656.15	ENST00000652157.1	2139	6	-118	12135	-6	-12135	5prime_fragment	FALSE	canonical	3	178	junction_2	44.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCATTTTCTGGTT	-6	True	NA	NA	False	NA	NA	NA	175005387	174950777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_174952203_175004893_175005081_175005205
transcript_113451.known	chr2	-	1861	14	FSM	ENSG00000115966.18	ENST00000456655.5	1861	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	71.2260340675661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTACTTGAAATTA	-5	True	NA	NA	False	NA	NA	NA	175168169	175074504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175074836_175080659_175080766_175092542_175092617_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_113453.known	chr2	-	4164	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	35.5021459473073	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTGCTTGTTC	-39	True	NA	-13	True	AATAAA	-17	NA	175168203	175072258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_113458.known	chr2	-	4079	13	FSM	ENSG00000115966.18	ENST00000345739.9	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_9	31.7774378381196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTCTCTTACCTT	-42	True	NA	-4	True	AATAAA	-26	NA	175168206	175072249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_11346.known	chr1	+	1873	11	FSM	ENSG00000079335.20	ENST00000370124.8	1873	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	8.17863069223694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATAAATATCAAGAAG	17	True	NA	NA	False	NA	NA	NA	100352501	100484734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291
transcript_113462.known	chr2	-	795	5	FSM	ENSG00000154518.10	ENST00000409194.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	1483.81743738911	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGAAGCTACAGCAG	-3	True	NA	65	True	NA	NA	NA	175181710	175178066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181484_175181655
transcript_113464.known	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3219	junction_1	156.889203650928	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	4	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
transcript_113465.known	chr2	-	1313	4	FSM	ENSG00000154518.10	ENST00000497075.5	1313	4	0	0	0	0	multi-exon	FALSE	canonical	3	2630	junction_3	433.396662039138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTATTTCCAAAGTCATT	-3	True	NA	-54	True	NA	NA	NA	175181710	175178185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175179251_175180097_175180179_175181354_175181467_175181655
transcript_113467.known	chr2	-	7542	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	9.05960202706989	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTTATCACTCCATA	5	True	NA	-21	True	AATAAA	-26	NA	176002267	175923881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
transcript_113469.known	chr2	+	1121	2	FSM	ENSG00000226363.4	ENST00000426615.4	1122	2	0	1	0	-1	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAATGATATGACTCAC	5787	False	NA	11	True	AATAAA	-19	NA	176177716	176179008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176178254_176178424
transcript_113470.known	chr2	-	345	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAACGTGTTC	126	False	NA	NA	False	NA	NA	NA	176201252	176200907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_176200900_176201300
transcript_113471.nic	chr2	+	1404	11	NIC	ENSG00000128654.14	novel	1592	11	NA	NA	17	-92	combination_of_known_junctions	TRUE	canonical	2	6	junction_3	224.43575918289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATGTTACATTTACTT	-26	True	NA	7	True	AATAAA	-14	NA	176269411	176337933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_176269670_176296859_176296908_176297848_176297896_176304240_176304366_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_113472.known	chr2	+	1592	11	FSM	ENSG00000128654.14	ENST00000420864.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	216.426800558526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	NA	False	NA	10	True	AATAAA	-21	NA	176269394	176338025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176269670_176270215_176270420_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_113473.known	chr2	+	1341	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	45.0801754901445	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	4	True	NA	10	True	AATAAA	-21	NA	176269441	176338025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_113475.known	chr2	+	817	10	FSM	ENSG00000128654.14	ENST00000452865.1	817	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	182.399304200536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGATCGTGGTAAAG	23	False	NA	NA	False	NA	NA	NA	176269501	176337630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329369_176329427_176330583_176330661_176337492
transcript_113479.known	chr2	+	2067	11	FSM	ENSG00000170144.21	ENST00000392524.6	2067	11	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_1	432.517618138267	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	NA	False	NA	-31	True	GATAAA	-36	NA	177212562	177220085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_113482.known	chr2	+	3111	11	FSM	ENSG00000170144.21	ENST00000678111.1	3111	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_10	1023.57313368415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	NA	False	NA	-10	True	AATAAA	-1	NA	177212723	177223942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_113484.known	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	869.440647773038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	NA	False	NA	6	True	AATAAA	-17	NA	177212748	177223958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_113486.known	chr2	+	5600	10	FSM	ENSG00000170144.21	ENST00000676681.1	5600	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_7	1028.56307536291	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212723	177223920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177219407
transcript_113489.known	chr2	+	5829	10	FSM	ENSG00000170144.21	ENST00000678421.1	5829	10	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_1	440.277942516618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212723	177223920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_113497.nic	chr2	+	569	4	ISM	ENSG00000170144.21	ENST00000435711.5	1731	10	-44	3733	4	-3555	5prime_fragment	FALSE	canonical	3	2335	junction_1	515.525190676675	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGATTTGCTTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	177212727	177216132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977
transcript_113498.nic	chr2	+	817	4	ISM	ENSG00000170144.21	ENST00000435711.5	1731	10	-44	3485	4	-3307	5prime_fragment	FALSE	canonical	3	2335	junction_1	515.525190676675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCAGAGTCACTACCTG	NA	False	NA	24	True	AATAAA	-26	NA	177212727	177216380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977
transcript_113499.known	chr2	+	3028	11	FSM	ENSG00000170144.21	ENST00000676874.1	3028	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_10	1223.11465120814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	NA	False	NA	-10	True	AATAAA	-1	NA	177212740	177223942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_11350.known	chr1	-	902	6	FSM	ENSG00000162694.14	ENST00000450240.2	902	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	154.242147287958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGATATTTGTGAAG	-2	True	NA	NA	False	NA	NA	NA	100894664	100874159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100878423_100878448_100888752_100888829_100894632
transcript_113503.known	chr2	-	2651	5	FSM	ENSG00000116044.16	ENST00000397063.8	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	125.230786949536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGATTCCTTTGA	1328	False	NA	-3	True	AATAAA	-24	NA	177263800	177230304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177263402
transcript_113504.known	chr2	-	2446	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	21.6491916708223	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGGGATTCCTT	10	True	NA	-6	True	AATAAA	-21	NA	177264727	177230307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
transcript_113506.known	chr2	-	521	2	FSM	ENSG00000116044.16	ENST00000462023.1	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTCAGCCTCCTGATG	-7	True	NA	NA	False	NA	NA	NA	177264659	177233878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_177234272_177264531
transcript_113508.known	chr2	+	7633	20	FSM	ENSG00000018510.18	ENST00000264167.11	7633	20	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_5	40.6303517676692	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTGTTATAGAAATTGT	7	True	NA	6	True	AATAAA	-16	NA	177392772	177543834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177538073
transcript_113511.known	chr2	+	2103	20	FSM	ENSG00000018510.18	ENST00000679459.1	2103	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_19	108.064308339257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGATCCACCCACGTT	-20	True	NA	NA	False	NA	NA	NA	177392745	177567024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177566820
transcript_113512.known	chr2	+	8603	20	FSM	ENSG00000018510.18	ENST00000679421.1	8603	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	107.933240883125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAAAGGGGATATGCA	-6	True	NA	NA	False	NA	NA	NA	177392759	177543592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177442236_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177538073
transcript_113517.known	chr2	+	3044	19	FSM	ENSG00000018510.18	ENST00000680770.1	3044	19	0	0	0	0	multi-exon	TRUE	canonical	3	385	junction_5	41.6468471380873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCAATTTAATCTTT	-20	True	NA	NA	False	AATAAA	-16	NA	177392745	177524950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747
transcript_113518.known	chr2	-	3799	1	FSM	ENSG00000196659.10	ENST00000408939.4	3799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTATTTTCTTTAGGG	0	True	NA	-6	True	ATTAAA	-31	NA	177552796	177548997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_177549000_177552800
transcript_113519.nnic	chr2	+	1828	10	NNC	ENSG00000155636.15	novel	1803	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	33.1453961199835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGACTTATTTATGTGAA	-1	True	NA	NA	False	AATAAA	-21	NA	178112449	178129656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121179_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129358
transcript_113520.known	chr2	+	1788	10	FSM	ENSG00000155636.15	ENST00000616198.4	1788	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	35.5089972948954	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGACTTATTTATGT	4	True	NA	NA	False	AATAAA	-18	NA	178112454	178129653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121173_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129396
transcript_113523.known	chr2	+	3637	26	FSM	ENSG00000079156.17	ENST00000392505.6	3637	26	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	10.9410054382584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-12	True	NA	NA	False	NA	NA	NA	178194480	178395772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178344285_178344361_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_113526.known	chr2	+	10652	25	FSM	ENSG00000079156.17	ENST00000190611.9	10652	25	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	7.20532210707243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGATTTTTTTGTGTA	19	True	NA	NA	False	AATAAA	-17	NA	178194511	178402893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_113529.known	chr2	+	3427	24	FSM	ENSG00000079156.17	ENST00000409045.7	3427	24	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	9.70432445064973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	30	True	NA	NA	False	NA	NA	NA	178194522	178395772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_113533.known	chr2	-	1616	9	FSM	ENSG00000180228.14	ENST00000424699.5	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	358.629487598273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCAGGGAACATGAT	-3	True	NA	-123	True	NA	NA	NA	178451151	178431653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
transcript_113534.known	chr2	-	1885	9	FSM	ENSG00000180228.14	ENST00000677584.1	1885	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	363.533698575524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-4	True	NA	-51	True	AATAAA	-12	NA	178451152	178431434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447455_178447587_178450241_178450412_178450965
transcript_113538.known	chr2	-	1780	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	295.382906114233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-9	True	NA	-51	True	AATAAA	-12	NA	178451157	178431434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
transcript_113539.known	chr2	-	1709	8	FSM	ENSG00000180228.14	ENST00000679037.1	1709	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	307.936184748644	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	2	True	NA	-51	True	AATAAA	-12	NA	178451146	178431434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447515_178447587_178450241_178450412_178450965
transcript_113543.known	chr2	-	1211	8	FSM	ENSG00000180228.14	ENST00000487082.5	1211	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_7	303.73995322261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTATCTCCTCATA	9	True	NA	NA	False	NA	NA	NA	178450764	178431965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450561
transcript_113545.known	chr2	-	1546	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_6	292.820432271308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	6	True	NA	-51	True	AATAAA	-12	NA	178451142	178431434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
transcript_113546.known	chr2	-	1752	7	FSM	ENSG00000180228.14	ENST00000677460.1	1752	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	334.60660981716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	NA	False	NA	-56	True	AATAAA	-7	NA	178451278	178431439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_113549.known	chr2	-	1793	7	FSM	ENSG00000180228.14	ENST00000676505.1	1793	7	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_5	369.008882759691	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-1	True	NA	-51	True	AATAAA	-12	NA	178450740	178431434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365
transcript_113554.known	chr2	-	3890	5	FSM	ENSG00000180228.14	ENST00000677806.1	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_4	44.2005373270507	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACAGGTGAAATTGGT	NA	False	NA	NA	False	NA	NA	NA	178451278	178440138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_113557.known	chr2	+	1049	3	FSM	ENSG00000223960.8	ENST00000436616.4	1365	3	316	0	1	0	multi-exon	FALSE	canonical	2	2	junction_1	11	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCATCAGCCACCT	15	True	NA	NA	False	AATAAA	-16	NA	178413969	178434091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178414114_178430694_178430890_178433381
transcript_113558.known	chr2	-	1824	8	FSM	ENSG00000180228.14	ENST00000677386.1	1824	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	312.389409002839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	NA	False	NA	-56	True	AATAAA	-7	NA	178451278	178431439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443289_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_113559.known	chr2	-	1455	6	FSM	ENSG00000180228.14	ENST00000677981.1	1455	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	351.616836912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	15	True	NA	-51	True	AATAAA	-12	NA	178451133	178431434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178450965
transcript_113560.known	chr2	-	1344	7	FSM	ENSG00000180228.14	ENST00000432031.6	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	107.959354491504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACTCCAGATTTAATTA	391	False	NA	NA	False	NA	NA	NA	178450757	178431975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241
transcript_113561.known	chr2	-	585	3	FSM	ENSG00000180228.14	ENST00000466165.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTAAATGAAGGTGCT	35	True	NA	NA	False	ATTAAA	-31	NA	178451113	178447319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178447587_178450241_178450412_178450965
transcript_113562.known	chr2	-	666	4	FSM	ENSG00000079150.19	ENST00000434643.6	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	28.6472802664872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTATTTCTACTTT	77	False	NA	NA	False	AATACA	-27	NA	178478499	178465769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178465932_178469651_178469783_178477061_178477214_178478278
transcript_113564.known	chr2	-	764	4	FSM	ENSG00000079150.19	ENST00000435079.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37.7211994624891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTATTTTTCCCCTA	23	True	NA	-106	True	TATAAA	-25	NA	178478553	178465690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178478278
transcript_113566.known	chr2	-	638	3	FSM	ENSG00000079150.19	ENST00000419184.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	31.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTATTTACTGTACTT	-19	True	NA	NA	False	NA	NA	NA	178478595	178465744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178465932_178469651_178469786_178478278
transcript_113568.known	chr2	-	555	2	FSM	ENSG00000079150.19	ENST00000685403.1	2545	2	-24	2014	0	-8	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTATTTGCTATTT	-24	True	NA	-114	True	TATAAA	-17	NA	178478600	178465698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178465932_178478278
transcript_11357.known	chr1	-	2825	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	41.7933906257915	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-2	True	NA	-25	True	AATAAA	-15	NA	100894842	100872390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
transcript_113570.known	chr2	+	13892	8	FSM	ENSG00000116095.11	ENST00000234453.10	13892	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	8.53324829889604	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTGGGGGAAAATGTTT	-14	True	NA	12	True	AATAAA	-17	NA	178480456	178516463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178480910_178485640_178485758_178490658_178490815_178493852_178493990_178495495_178495661_178499210_178499255_178501060_178501177_178503759
transcript_113572.nic	chr2	+	817	3	ISM	ENSG00000116095.11	ENST00000234453.10	13892	8	-92	25650	-92	-3176	5prime_fragment	FALSE	canonical	3	94	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTATAAACTTTTCCC	6	True	NA	NA	False	AAAAAG	-6	NA	178480364	178490813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_178480910_178485640_178485758_178490658
transcript_11358.known	chr1	-	2835	5	FSM	ENSG00000162694.14	ENST00000370113.7	2835	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	119.742431911165	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTGTGTTAACTAAG	-16	True	NA	-21	True	AATAAA	-19	NA	100894812	100872386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888865_100894632
transcript_113580.known	chr2	+	3002	5	FSM	ENSG00000237298.10	ENST00000657210.1	3002	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.65206734782504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	178523166	178540779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178523637_178531313_178531579_178535731_178535829_178537603_178537692_178538697
transcript_113583.known	chr2	+	2691	4	FSM	ENSG00000237298.10	ENST00000664161.1	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	-8	True	NA	NA	False	NA	NA	NA	178523212	178540779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178523637_178535731_178535829_178537603_178537692_178538697
transcript_113594.nnic	chr2	-	3073	19	NNC	ENSG00000163492.16	novel	9205	24	NA	NA	-1570	15810	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_9	8.86193831039711	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGGAATCTGAAGGCGCT	5326	False	NA	NA	False	AAGAAA	-43	NA	179051707	178856322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_178856398_178865766_178865917_178868025_178868206_178869116_178869306_178871426_178871553_178872132_178872313_178877963_178878144_178884900_178885093_178886751_178886872_178888526_178888669_178905328_178905502_178918712_178918908_178944534_178944652_178961229_178961484_178975056_178975166_178978483_178978676_179047283_179047407_179049839_179050067_179051558
transcript_113599.nnic	chr2	-	2817	3	NNC	ENSG00000163492.16	novel	2029	12	NA	NA	-1570	-129215	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATTATGATGTGGAAGA	5326	False	NA	NA	False	AATAAA	-30	NA	179051707	179044965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_179047407_179049839_179050067_179051558
transcript_113601.known	chr2	-	10671	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	11.7811649572895	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGACATTCCTGTCTTT	-30	True	NA	NA	False	AATAAA	-33	NA	179264832	179101677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
transcript_113612.nnic	chr2	-	2983	11	NNC	ENSG00000144331.20	novel	3395	10	NA	NA	210	0	intron_retention	TRUE	non_canonical	0	0	junction_7	15.0266430050095	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTATTTTCAGTGT	208	False	NA	-16	True	AATAAA	-17	NA	179861402	179441981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_179443469_179444875_179444978_179445549_179445729_179446524_179446771_179483271_179483435_179518527_179518639_179544826_179544928_179577637_179577644_179769668_179769803_179770520_179770673_179861100
transcript_113617.nic	chr2	-	1783	3	ISM	ENSG00000144331.20	ENST00000410066.7	3395	10	210	326492	210	1056	5prime_fragment	FALSE	canonical	3	33	junction_1	6	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATCTAACTACTTTTT	208	False	NA	-9	True	AATAAA	-18	NA	179861402	179768473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_179769803_179770520_179770673_179861100
transcript_113618.known	chr2	-	2392	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_13	34.9156482551132	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACAAGAACACGG	-8	True	NA	-89	True	GATAAA	-40	NA	180007113	179945620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
transcript_113628.known	chr2	+	766	6	FSM	ENSG00000170035.16	ENST00000602291.5	766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	352.151331106387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATAGCCAGACAGTGGAC	23	False	NA	NA	False	NA	NA	NA	180980390	181062849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_180980547_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_113629.nic	chr2	+	1494	6	NIC	ENSG00000170035.16	novel	1556	6	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	314.856157633927	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTCCTGTCGTAATAT	-7	True	NA	14	True	AATAAA	-16	NA	180981076	181063424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_180981386_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_113630.known	chr2	+	1556	6	FSM	ENSG00000170035.16	ENST00000602710.5	1556	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	345.40156340121	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTCAGTCTTGTT	-1	True	NA	31	True	AATAAA	-33	NA	180981123	181063441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_180981478_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_113631.known	chr2	+	1555	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_1	95.4869624608512	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTCGTAATATT	-7	True	NA	15	True	AATAAA	-17	NA	180980604	181063425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_113632.known	chr2	+	2070	16	FSM	ENSG00000115232.14	ENST00000233573.6	2070	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.27540843131393	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGGAATATTTTCCTTT	42	True	NA	NA	False	AAAAAG	-16	NA	181457427	181509805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_181457852_181458195_181458318_181474959_181475067_181475158_181475289_181478756_181478825_181480136_181480267_181481597_181481684_181482359_181482423_181482513_181482652_181485880_181485993_181493324_181493420_181494721_181494813_181495370_181495417_181495782_181495938_181498622_181498778_181509657
transcript_113633.known	chr2	+	5308	18	FSM	ENSG00000138434.17	ENST00000431877.7	5308	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	6.36599965104409	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTAGTGGTTTCTTAA	13	True	NA	14	True	AATAAA	-19	NA	181891729	181930738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_181892278_181892614_181892661_181896029_181896080_181896907_181896965_181898879_181898920_181899013_181899113_181900695_181900905_181901765_181902467_181909898_181909972_181913844_181913934_181915215_181916428_181918597_181918676_181918754_181918883_181919295_181919447_181920596_181920663_181921947_181922413_181928160_181928279_181929560
transcript_113638.known	chr2	+	20144	24	FSM	ENSG00000077232.19	ENST00000264065.12	20144	24	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_11	69.7077615670186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-18	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_113642.known	chr2	+	20086	24	FSM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	154.878158099626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-20	True	NA	NA	False	AATAAA	-20	NA	182716254	182794464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743657_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_113643.known	chr2	+	20006	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	139.93705786992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-18	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_113647.nic	chr2	+	848	5	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	-10	72401	-10	-727	5prime_fragment	FALSE	canonical	3	605	junction_4	53.0165068634289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAATTTGGTAAGTTT	-30	True	NA	NA	False	TTTAAA	-45	NA	182716244	182722063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024
transcript_113648.nic	chr2	+	867	4	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	-210	74437	-210	-2763	5prime_fragment	FALSE	canonical	3	625	junction_3	44.8503685108111	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTTTTAAAAATAAATAG	40	False	NA	-34	True	NA	NA	NA	182716044	182720027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006
transcript_113649.nic	chr2	+	744	4	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	-7	74357	-7	-2683	5prime_fragment	FALSE	canonical	3	625	junction_3	44.8503685108111	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTTGAGGATAATCAAG	-27	True	NA	46	True	AAAAAG	-21	NA	182716247	182720107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006
transcript_11365.known	chr1	-	678	2	FSM	ENSG00000162694.14	ENST00000480774.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCCATTCATCTGTCA	-9	True	NA	NA	False	NA	NA	NA	100894805	100888323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100888829_100894632
transcript_113650.known	chr2	-	2637	6	FSM	ENSG00000162998.5	ENST00000295113.5	2637	6	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_4	26.20381651592	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTATGTTTCCTTCTA	4	True	NA	0	True	AATAAA	-19	NA	182866637	182833274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_182834966_182837947_182838012_182838408_182838614_182842477_182842544_182858785_182858834_182866074
transcript_113653.known	chr2	-	4989	32	FSM	ENSG00000061676.15	ENST00000360982.2	4989	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	200.179014577481	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTAAGATCCTTGGAT	92	False	NA	-7	True	AATAAA	-28	NA	183038858	182924876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183024977_183024996_183037991
transcript_113654.known	chr2	-	20332	31	FSM	ENSG00000061676.15	ENST00000361354.9	20332	31	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_22	81.3975429604604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTGTTATGTGTCCT	-14	True	NA	-2	True	AATAAA	-19	NA	183038457	182909114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183037991
transcript_113657.known	chr2	+	1545	9	FSM	ENSG00000163002.13	ENST00000295119.9	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	28.8593030927637	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	2	True	NA	27	True	AATAAA	-15	NA	183124442	183161680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183151507_183151650_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_113667.known	chr2	+	2032	10	FSM	ENSG00000065548.18	ENST00000337859.11	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_6	73.4737712502114	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCTTTTTTTAAGTT	-36	True	NA	29	True	AATAAA	-37	NA	186486259	186509361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542
transcript_113671.nic	chr2	+	822	6	ISM	ENSG00000065548.18	ENST00000337859.11	2032	10	-30	5195	-23	67	5prime_fragment	FALSE	canonical	3	488	junction_4	79.8884221899519	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGAAGATGAAAT	0	True	NA	NA	False	GATAAA	-7	NA	186486229	186504166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031
transcript_113677.nic	chr2	+	330	2	ISM	ENSG00000065548.18	ENST00000437396.1	556	5	-33	6041	-23	15	5prime_fragment	FALSE	canonical	3	546	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAATTTAAATGTCCA	0	True	NA	NA	False	NA	NA	NA	186486229	186495334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_186486458_186495232
transcript_113678.known	chr2	+	304	2	FSM	ENSG00000065548.18	ENST00000477672.1	304	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCCACGTCAGGTAAG	-29	True	NA	NA	False	NA	NA	NA	186486266	186495319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_186486458_186495206
transcript_11368.known	chr1	+	429	1	FSM	ENSG00000273204.1	ENST00000609247.1	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTTAACAGCCTTTAT	13	False	NA	8	True	ATTAAA	-17	NA	100894927	100895356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100894900_100895400
transcript_113680.known	chr2	+	5731	8	FSM	ENSG00000144369.14	ENST00000304698.10	5731	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	4.2570469787861	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCATTGTTTAATTT	21	True	NA	12	True	AATAAA	-17	NA	186694059	186765959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_186694412_186740227_186740462_186743482_186743576_186747091_186747251_186751133_186751305_186753932_186754050_186761112_186761237_186761478
transcript_113689.known	chr2	-	3859	8	FSM	ENSG00000003436.16	ENST00000233156.9	3859	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	36.9815177225222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	13	True	NA	NA	False	AGTAAA	-24	NA	187554435	187464229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
transcript_11369.known	chr1	+	7898	12	FSM	ENSG00000162695.12	ENST00000370112.8	7898	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	23.6615250690872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGAATTGTGTCTTA	-31	True	NA	8	True	AATAAA	-18	NA	100896075	100981753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809_100974903_100975218
transcript_113691.nnic	chr2	-	438	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-43	-63674	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCCTAATCCCTTCC	-1	True	NA	-10	True	AATAAA	-16	NA	187565803	187560689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_187560874_187565549
transcript_113692.known	chr2	-	3649	8	FSM	ENSG00000003436.16	ENST00000392365.5	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	26.9640728468419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	6978	False	NA	NA	False	AGTAAA	-24	NA	187513641	187464229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
transcript_113693.known	chr2	-	1088	7	FSM	ENSG00000003436.16	ENST00000339091.8	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	54.5356662092698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAACATAGTCTTCTCA	10	True	NA	NA	False	AATAAA	-20	NA	187554438	187478584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_187478804_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
transcript_113697.nnic	chr2	+	2323	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-430	0	at_least_one_novel_splicesite	FALSE	canonical	3	318	junction_1	111	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	-1	True	NA	29	True	AATAAA	-17	NA	188033363	188040601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188034061_188035602_188035757_188039129
transcript_113699.nnic	chr2	+	2101	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	207.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	308	False	NA	29	True	AATAAA	-17	NA	188033765	188040601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188034061_188035422_188035757_188039129
transcript_1137.known	chr1	+	4098	16	FSM	ENSG00000160072.20	ENST00000673477.1	4098	16	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_14	128.308205332144	1198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACTGTTTAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	1471764	1497848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1472090_1477273_1477351_1478643_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
transcript_113701.nnic	chr2	+	2626	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	233.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	0	True	NA	29	True	AATAAA	-17	NA	188033809	188040601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188034061_188034853_188035757_188039129
transcript_113704.nnic	chr2	+	2827	2	FSM	ENSG00000289205.1	ENST00000686960.1	1739	2	-1088	0	-1088	0	multi-exon	FALSE	canonical	3	844	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	NA	False	NA	29	True	AATAAA	-17	NA	188032705	188040601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188034061_188039129
transcript_113707.nic	chr2	+	2988	14	NIC	ENSG00000144366.16	novel	2643	13	NA	NA	-251	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	262.919160973674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	36	True	NA	NA	NA	188291417	188595059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_188292167_188383762_188383890_188466474_188466569_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_113713.known	chr2	+	2643	13	FSM	ENSG00000144366.16	ENST00000409843.5	2643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	245.080754831727	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	-2	True	NA	36	True	NA	NA	NA	188291668	188595059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_113714.nic	chr2	+	2481	13	NIC	ENSG00000144366.16	novel	2643	13	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	261.648725499582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	-1	True	NA	36	True	NA	NA	NA	188291883	188595059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_188292220_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_113719.nnic	chr2	+	2502	13	NIC	ENSG00000144366.16	novel	3544	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	265.447054775315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	0	True	NA	36	True	NA	NA	NA	188292823	188595059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_188293181_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_11372.known	chr1	+	8204	11	FSM	ENSG00000162695.12	ENST00000357650.9	8204	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	18.5698680663057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATTGTGTCTTATCAG	-17	True	NA	12	True	AATAAA	-22	NA	100896089	100981757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809
transcript_113720.nnic	chr2	+	2580	13	NNC	ENSG00000144366.16	novel	3347	12	NA	NA	-22	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.074754295526	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCTCAGTTTA	-14	True	NA	52	True	NA	NA	NA	188292809	188595075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188293113_188334340_188334468_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_113721.known	chr2	+	3294	12	FSM	ENSG00000144366.16	ENST00000409830.6	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	133.183400549086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	-11	True	NA	NA	False	AATAAA	-15	NA	188291873	188595926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_113723.known	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	110.391115344974	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	-6	True	NA	NA	False	AATAAA	-20	NA	188292771	188595931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_113729.nic	chr2	+	2315	11	NIC	ENSG00000144366.16	novel	3347	12	NA	NA	-22	16	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	198.171668005293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCTCAGTTTA	-14	True	NA	52	True	NA	NA	NA	188292809	188595075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_113745.known	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	173.955933117174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	20	False	NA	NA	False	NA	NA	NA	188291945	188542122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_113749.known	chr2	+	1242	7	FSM	ENSG00000144366.16	ENST00000409637.7	1242	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	140.061196942226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAAATAAATATTCTT	15	False	NA	-25	True	NA	NA	NA	188292838	188541716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_11375.known	chr1	-	1034	8	FSM	ENSG00000117543.22	ENST00000488176.1	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	89.9378470196536	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTTGGATGTATCCC	16	True	NA	NA	False	NA	NA	NA	101025767	100990357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025664
transcript_113762.known	chr2	-	6829	54	FSM	ENSG00000204262.14	ENST00000374866.9	6829	54	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_51	54.7598205753836	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTCTCAAATTTC	0	True	NA	-4	True	AATAAA	-16	NA	189179761	189031897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189034217_189034915_189035156_189036615_189036804_189039271_189039564_189041585_189041694_189042719_189042774_189043150_189043259_189045178_189045233_189045799_189045908_189048208_189048263_189049346_189049455_189050568_189050677_189051319_189051482_189052171_189052226_189052748_189052803_189052910_189053019_189053423_189053478_189053894_189053949_189054158_189054213_189056972_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009_189063064_189063171_189063271_189063979_189064034_189064556_189064656_189065003_189065058_189066389_189066498_189066728_189066783_189068014_189068114_189068225_189068271_189068785_189068885_189072039_189072094_189075392_189075438_189078515_189078570_189079062_189079108_189079977_189080032_189080989_189081044_189083983_189084038_189085159_189085214_189085718_189085773_189086725_189086771_189088694_189088773_189092309_189092421_189097276_189097331_189098726_189098760_189100106_189100140_189104263_189104278_189110224_189110450_189179507
transcript_113775.known	chr2	+	2647	21	FSM	ENSG00000115368.10	ENST00000314761.9	2647	21	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_16	39.6382075780427	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	0	True	NA	26	True	AATAAA	-29	NA	189441473	189475552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_113784.known	chr2	+	706	5	FSM	ENSG00000115368.10	ENST00000472286.5	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_4	38.4252521136817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCCTTATTTTTGTGTG	-12	True	NA	NA	False	NA	NA	NA	189441461	189455621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319
transcript_113786.nnic	chr2	-	3617	9	NNC	ENSG00000138449.11	novel	3330	8	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	272.791014331484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGAATTCTGTTCC	3145	False	NA	-9	True	TATAAA	-20	NA	189580819	189560589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_189562192_189563583_189564226_189565353_189565600_189571714_189571842_189572845_189572962_189575160_189575321_189578218_189578473_189579812_189579881_189580417
transcript_113789.known	chr2	-	3330	8	FSM	ENSG00000138449.11	ENST00000261024.7	3330	8	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_3	51.5957599903286	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGAATTCTGTTCC	-2	True	NA	-9	True	TATAAA	-20	NA	189580786	189560589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189562192_189563583_189564226_189565353_189565600_189571714_189571842_189572845_189572962_189575160_189575321_189579812_189579881_189580417
transcript_113795.known	chr2	+	2411	6	FSM	ENSG00000138381.10	ENST00000260952.9	2411	6	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_5	53.777318638995	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	-14	True	NA	67	True	TTTAAA	-6	NA	189661458	189670831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040_189667597_189667763_189667946_189670440
transcript_113797.known	chr2	+	643	4	FSM	ENSG00000286053.2	ENST00000607829.6	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	50.5459087255229	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	-14	True	NA	19	True	AATAAA	-19	NA	189661458	189666401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040
transcript_11380.known	chr1	-	894	7	FSM	ENSG00000117543.22	ENST00000498372.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	122.829715007765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCATCTTGAATTTT	487	False	NA	NA	False	NA	NA	NA	101025755	100990333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025664
transcript_113800.known	chr2	-	1910	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	26.6493433314969	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-14	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_113812.known	chr2	+	3156	13	FSM	ENSG00000064933.19	ENST00000441310.7	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_10	44.7911046476368	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	-43	True	NA	28	True	AATAAA	-18	NA	189784449	189877629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_113818.known	chr2	+	2576	12	FSM	ENSG00000064933.19	ENST00000447232.6	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	127.452729853493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	51	True	NA	28	True	AATAAA	-18	NA	189784543	189877629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189867798_189867930_189873495_189873657_189877271
transcript_113822.known	chr2	+	2795	12	FSM	ENSG00000064933.19	ENST00000409823.7	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	122.929463077661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATATGTTTAAGAAGAT	8	True	NA	-4	True	NA	NA	NA	189784500	189877436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_113824.known	chr2	+	3012	12	FSM	ENSG00000064933.19	ENST00000342075.8	3012	12	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	121.475841899899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGATTCTCAAGAACCA	-4	True	NA	26	True	AATAAA	-16	NA	189784488	189877627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_113831.nic	chr2	+	2429	10	ISM	ENSG00000064933.19	ENST00000441310.7	3156	13	-362	13840	3	-325	5prime_fragment	FALSE	canonical	3	373	junction_9	32.8231324631175	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGAGCCATTGAACAG	NA	False	NA	NA	False	ACTAAA	-26	NA	189784087	189863789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742
transcript_113834.nic	chr2	+	1796	9	ISM	ENSG00000064933.19	ENST00000441310.7	3156	13	15	22710	15	2157	5prime_fragment	FALSE	canonical	3	384	junction_3	30.1203315884802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATGTAATAGATAATAA	-28	True	NA	NA	False	AATGAA	-29	NA	189784464	189854919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238
transcript_113835.known	chr2	+	3417	12	FSM	ENSG00000064933.19	ENST00000624204.3	3417	12	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	121.475841899899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	NA	False	NA	27	True	AATAAA	-17	NA	189784084	189877628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_113842.known	chr2	+	948	5	FSM	ENSG00000064933.19	ENST00000374826.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	189.584249082037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCATGTTCAAAATAATT	15	True	NA	NA	False	ATTAAA	-16	NA	189784507	189806846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189806422
transcript_113843.nic	chr2	+	1018	5	ISM	ENSG00000064933.19	ENST00000421722.5	2285	10	-440	46024	3	-91	5prime_fragment	FALSE	canonical	3	384	junction_3	34.928498393146	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTAAAGATGAAATAAAAAA	NA	False	NA	NA	False	AAGAAA	-26	NA	189784087	189818090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016
transcript_113846.known	chr2	-	2150	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	502.831171965303	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAACTGAATTCG	-13	True	NA	41	True	ATTAAA	-20	NA	189784339	189770266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
transcript_113849.nnic	chr2	-	1184	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	288	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	531.025893907256	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTTCTCGTTTTAT	-21	True	NA	-6	True	ATTAAA	-17	NA	189784030	189771313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189783878
transcript_113857.known	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_3	236.114849643605	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	2	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
transcript_113858.nnic	chr2	-	1092	4	NNC	ENSG00000128699.14	novel	2009	4	NA	NA	270	-3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	541.557219712028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTTCTCGTTTTAT	545	False	NA	-6	True	ATTAAA	-17	NA	189784048	189771313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783878
transcript_11386.nic	chr1	-	1246	7	NIC	ENSG00000117543.22	novel	1768	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	95.6127897070029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	436	False	NA	-24	True	ATTAAA	-16	NA	101025806	100990062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_100990632_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
transcript_113864.known	chr2	+	1882	4	FSM	ENSG00000064933.19	ENST00000409985.5	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	38.5054108751831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGTCTTCATTTCA	-43	True	NA	25	True	ATTAAA	-23	NA	189784449	189807054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651
transcript_113865.nic	chr2	-	1425	15	NIC	ENSG00000198130.16	novel	2434	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	145.818677592049	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTAATGCCTCAT	-3	True	NA	-9	True	AATAAA	-21	NA	190319829	190204634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_190204803_190205099_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_113869.known	chr2	-	2434	14	FSM	ENSG00000198130.16	ENST00000359678.10	2434	14	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	36.0223467788486	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTTCTCCTTCATCCC	0	True	NA	NA	False	AATAAA	-16	NA	190319826	190203919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_113874.known	chr2	-	2463	13	FSM	ENSG00000198130.16	ENST00000392332.7	2463	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	156.314764355628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTTTCTCCTTCATCC	968	False	NA	NA	False	AATAAA	-15	NA	190319890	190203920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190205233_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_113876.nic	chr2	-	1328	13	ISM	ENSG00000198130.16	ENST00000359678.10	2434	14	-3	4756	-3	0	5prime_fragment	FALSE	canonical	3	559	junction_9	35.6226363738315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCAAACCTGAAAC	-3	True	NA	14	True	NA	NA	NA	190319829	190208675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_113878.known	chr2	+	2044	7	FSM	ENSG00000151689.13	ENST00000392329.7	2044	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.32142096940637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	-33	True	NA	NA	False	AATAAA	-14	NA	190343588	190371665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190343962_190348887_190349032_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_113882.known	chr2	+	1919	6	FSM	ENSG00000151689.13	ENST00000322522.8	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.9496835316263	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	-52	True	NA	NA	False	AATAAA	-14	NA	190343569	190371665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190343962_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_113884.known	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.26782687642637	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	2	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
transcript_113891.known	chr2	+	2360	8	FSM	ENSG00000138386.17	ENST00000409581.5	2360	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	18.3980921814836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACAGGAAATTTTTAGC	-33	True	NA	NA	False	GATAAA	-11	NA	190649069	190690919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190649361_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
transcript_113892.known	chr2	+	4508	10	FSM	ENSG00000138386.17	ENST00000337386.10	4508	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.7505821649365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATGTTTATAGCATTT	-20	True	NA	14	True	AATAAA	-19	NA	190649082	190692766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190649361_190649845_190649983_190655976_190656154_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
transcript_113893.known	chr2	-	4116	25	FSM	ENSG00000115415.20	ENST00000361099.8	4116	25	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	22.8846367072371	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGGTTTAGCTGTCA	9	True	NA	-6	True	ATTAAA	-17	NA	191014171	190969148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_113896.known	chr2	-	4020	24	FSM	ENSG00000115415.20	ENST00000540176.6	4020	24	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_23	51.6474891741721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGAGGTTTAGCTGT	6786	False	NA	-8	True	ATTAAA	-15	NA	191014231	190969150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191014017
transcript_113898.known	chr2	-	3894	24	FSM	ENSG00000115415.20	ENST00000673858.1	3894	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	54.18483384935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGAGGCCTCCTCTCTC	20	True	NA	-6	True	ATTAAA	-39	NA	191014160	190969267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_113899.known	chr2	-	2723	24	FSM	ENSG00000115415.20	ENST00000392323.6	2723	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	70.7434460616708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCCAA	-17	True	NA	-108	True	NA	NA	NA	191014197	190975641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191010366_191010450_191013524_191013679_191014017
transcript_113900.known	chr2	-	2716	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_10	23.7091972250823	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	12	True	NA	-3	True	AATAAA	-17	NA	191014168	190975536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_113902.known	chr2	-	2625	22	FSM	ENSG00000115415.20	ENST00000673841.1	2625	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_21	53.7137791262839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	6786	False	NA	-3	True	AATAAA	-17	NA	191014231	190975536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191014017
transcript_113903.known	chr2	-	3937	25	FSM	ENSG00000115415.20	ENST00000673942.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.9821117611092	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATATAATATGCACAC	19	True	NA	-50	True	ATTAAA	-20	NA	191014161	190969311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986942_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_113904.known	chr2	-	3167	26	FSM	ENSG00000115415.20	ENST00000415035.2	3167	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.2271347098422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTGT	6789	False	NA	NA	False	ACTAAA	-20	NA	191014228	190964351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190964695_190970497_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_113905.known	chr2	+	4475	15	FSM	ENSG00000115419.13	ENST00000338435.8	4475	15	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	37.358167153398	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTTTTTTTGTTT	14	False	NA	16	True	AATAAA	-16	NA	190880833	190935289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190921023_190921057_190921144_190921204_190923916_190923984_190924542_190924594_190927305_190927483_190930436_190930569_190931544_190931638_190932715
transcript_113907.known	chr2	-	2560	24	FSM	ENSG00000138378.19	ENST00000392320.7	2560	24	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_11	5.2932885422658	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTGCCTGTGTTTGGT	2	True	NA	-10	True	AAGAAA	-30	NA	191150994	191029575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_191029867_191030971_191031081_191031449_191031517_191032957_191033150_191033489_191033627_191033910_191034006_191034547_191034598_191036163_191036300_191039198_191039298_191041064_191041149_191054489_191054535_191058017_191058112_191058201_191058220_191058709_191058770_191061728_191061822_191062761_191062921_191064806_191064959_191066429_191066516_191069692_191069772_191073097_191073191_191076226_191076326_191146612_191146758_191148075_191148205_191150946
transcript_113911.known	chr2	+	4933	31	FSM	ENSG00000128641.19	ENST00000304164.8	4933	31	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	99.9728907698927	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	49	False	NA	17	True	CATAAA	-17	NA	191245527	191425389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191245612_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191400748_191400836_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_113919.nic	chr2	+	3709	30	NIC	ENSG00000128641.19	novel	5069	31	NA	NA	-9	67	combination_of_known_junctions	FALSE	canonical	3	80	junction_22	93.4047105473679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTATTGGAATAGTT	-17	True	NA	33	True	AATAAA	-18	NA	191245394	191424104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_113920.nic	chr2	+	4787	30	NIC	ENSG00000128641.19	novel	5069	31	NA	NA	-30	-225	combination_of_known_junctions	FALSE	canonical	3	80	junction_22	93.4047105473679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTGAATCACAACTGTA	NA	False	NA	16	True	AATAAA	-21	NA	191245373	191425161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_113926.known	chr2	+	5026	29	FSM	ENSG00000128641.19	ENST00000339514.8	5026	29	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_22	76.2484108231852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	NA	False	NA	17	True	CATAAA	-17	NA	191245275	191425389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_113934.nic	chr2	+	1174	10	ISM	ENSG00000128641.19	ENST00000392318.8	5069	31	-31	61513	-31	0	5prime_fragment	FALSE	canonical	3	410	junction_2	35.6526452189892	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACATCCGTGGAGAATC	NA	False	NA	NA	False	GATAAA	-3	NA	191245372	191363873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727
transcript_11394.known	chr1	-	524	4	FSM	ENSG00000117543.22	ENST00000476507.1	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	24.0878023535196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATACATTTAATTGT	489	False	NA	NA	False	AATAAA	-22	NA	101025753	101013648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_101013819_101021640_101021766_101025308_101025467_101025682
transcript_113941.known	chr2	+	1914	7	FSM	ENSG00000173559.15	ENST00000307834.9	1914	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.92751507455695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGTAATTTTTGCCCTT	-9	True	NA	7	True	AATAAA	-22	NA	191678126	191686939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191682491_191682596_191683728_191683805_191684229_191684297_191685598
transcript_113942.known	chr2	+	11524	6	FSM	ENSG00000173559.15	ENST00000410026.7	11524	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.57904423581089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTTTGCTTTTATTT	0	True	NA	NA	False	AATAAA	-14	NA	191678135	191696662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_113943.known	chr2	+	2269	6	FSM	ENSG00000173559.15	ENST00000425611.9	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.3081318457076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTTTTGCCCTTTCAA	0	True	NA	11	True	AATAAA	-26	NA	191678135	191686943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_113944.known	chr2	-	2842	10	FSM	ENSG00000144339.12	ENST00000392314.5	2842	10	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	8.60376030338042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGCGTGGACTTTAAAA	7	True	NA	NA	False	AATAAA	-25	NA	192194916	191949042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_191950465_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_113945.known	chr2	-	2799	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	7.4103697780147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGCGTGGACTTTA	-10	True	NA	NA	False	AATAAA	-22	NA	192194933	191949045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_113949.nnic	chr2	+	5404	11	NNC	ENSG00000196950.14	novel	2009	6	NA	NA	10301	0	intron_retention	FALSE	canonical	3	300	junction_2	349.709894055058	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	NA	False	NA	17	True	AATAAA	-20	NA	195586277	195737700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_195586418_195606135_195606234_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_11395.known	chr1	+	3944	3	FSM	ENSG00000233184.8	ENST00000659528.2	3983	3	39	0	4	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTCTTTCAATGTT	11	True	NA	NA	False	GATAAA	-38	NA	101025893	101090513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_101026062_101083460_101083575_101086851
transcript_113952.known	chr2	+	5222	10	FSM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_1	111.426552236035	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	5	True	NA	17	True	AATAAA	-20	NA	195657225	195737700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_11396.known	chr1	+	619	2	FSM	ENSG00000233184.8	ENST00000654574.2	634	2	11	4	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAACTGTTTTTCTT	-26	True	NA	8	True	AATAAA	-20	NA	101025856	101087265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_101026062_101086851
transcript_113969.nnic	chr2	+	432	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10301	67	at_least_one_novel_splicesite	FALSE	canonical	3	300	junction_2	14.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	NA	False	NA	NA	False	AATGAA	-7	NA	195586277	195680225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_11397.known	chr1	+	2778	2	FSM	ENSG00000170989.10	ENST00000305352.7	2778	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTGAAGAGCATTC	0	True	NA	7	True	AATAAA	-17	NA	101237018	101241518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_101237100_101238821
transcript_113970.nnic	chr2	+	939	3	NNC	ENSG00000196950.14	novel	2009	6	NA	NA	10301	299	at_least_one_novel_splicesite	FALSE	canonical	3	300	junction_2	14.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAGGAAGAAAAAAGG	NA	False	NA	40	True	AATAAA	-34	NA	195586277	195680732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_113973.nic	chr2	+	892	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-37	56970	-37	299	5prime_fragment	FALSE	canonical	3	877	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAGGAAGAAAAAAGG	133	False	NA	40	True	AATAAA	-34	NA	195657090	195680732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_195657282_195680031
transcript_11398.known	chr1	-	7311	67	FSM	ENSG00000060718.22	ENST00000370096.9	7311	67	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_51	18.6993515500677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTGGTCATTTTCTT	5	True	NA	-5	True	AATAAA	-20	NA	103108522	102876472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_102878166_102879682_102879917_102881696_102881766_102883198_102883312_102886806_102887057_102888576_102888631_102888722_102888759_102888865_102888920_102889454_102889563_102890450_102890505_102898124_102898179_102898665_102898774_102898940_102898995_102912158_102912213_102913636_102913691_102914351_102914406_102914703_102914812_102915630_102915685_102920310_102920365_102921517_102921572_102923335_102923390_102934448_102934557_102935059_102935114_102939034_102939089_102940326_102940435_102946848_102946957_102961865_102961920_102962175_102962266_102962652_102962761_102965486_102965541_102970218_102970273_102974829_102974884_102978707_102978753_102978859_102978914_102979059_102979105_102979381_102979436_102984137_102984192_102987632_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
transcript_113985.known	chr2	-	4261	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_8	32.8476613799443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAAGCTGCTCCTTGCT	3	True	NA	NA	False	ATTAAA	-18	NA	196799683	196763034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_113992.known	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_7	19.0455867591419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	27	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_113994.known	chr2	-	3818	19	FSM	ENSG00000119041.11	ENST00000651042.1	3818	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	92.5804454995162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATATACTGTTAGCTTA	-20	True	NA	NA	False	NA	NA	NA	196799706	196763728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196773912_196774141_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_114.known	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4002_+_0_4000
transcript_11400.nic	chr1	-	2845	30	ISM	ENSG00000060718.22	ENST00000370096.9	7311	67	0	111161	0	13380	5prime_fragment	FALSE	canonical	3	44	junction_14	7.25876402512258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGGTAAATGACTTTAAA	5	True	NA	NA	False	NA	NA	NA	103108522	102987633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
transcript_114005.known	chr2	-	6463	25	FSM	ENSG00000115524.17	ENST00000335508.11	6463	25	0	0	0	0	multi-exon	TRUE	canonical	3	1439	junction_21	202.108018251792	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-1	True	NA	-20	True	AATAAA	-17	NA	197435028	197389783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_114009.nic	chr2	-	2470	16	ISM	ENSG00000115524.17	ENST00000335508.11	6463	25	-82	11969	-31	269	5prime_fragment	FALSE	canonical	3	1439	junction_12	201.265882741103	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTGAAGGTAATTATT	NA	False	NA	NA	False	AATGAA	-6	NA	197435110	197401752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_114015.nic	chr2	-	1600	11	ISM	ENSG00000115524.17	ENST00000335508.11	6463	25	-82	15342	-31	2810	5prime_fragment	FALSE	canonical	3	1439	junction_7	231.149215875806	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGTTGCTTTTAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	197435110	197405125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_114020.known	chr2	-	651	5	FSM	ENSG00000115524.17	ENST00000414963.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	901.534629118594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	197435079	197418795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_114022.known	chr2	+	2239	5	FSM	ENSG00000115520.9	ENST00000263960.7	2112	5	-129	2	-70	-2	multi-exon	FALSE	canonical	3	273	junction_4	43.9658958739612	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATCTCCTGTCCTCCT	2246	False	NA	NA	False	AATATA	-29	NA	197453422	197475308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197453665_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_114024.known	chr2	+	879	4	FSM	ENSG00000115520.9	ENST00000409398.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	135.492517218562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCTAGAATACTGGC	12	False	NA	NA	False	NA	NA	NA	197453492	197474168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197453665_197462538_197462732_197470069_197470172_197473756
transcript_114026.known	chr2	-	2245	12	FSM	ENSG00000144381.18	ENST00000388968.8	2245	12	0	0	0	0	multi-exon	FALSE	canonical	1	2687	junction_7	1687.50053810827	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	0	True	NA	NA	False	AATAAA	-18	NA	197499840	197486583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_114027.known	chr2	-	2407	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	0	0	0	multi-exon	FALSE	canonical	1	235	junction_11	2610.58026860753	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	2874	False	NA	NA	False	AATAAA	-16	NA	197500221	197486585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
transcript_114028.known	chr2	-	2299	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	0	0	0	multi-exon	FALSE	canonical	1	186	junction_11	2621.74102458652	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	2821	False	NA	NA	False	AATAAA	-16	NA	197500274	197486585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
transcript_114037.known	chr2	-	2413	13	FSM	ENSG00000144381.18	ENST00000678621.1	2413	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3057.32328007505	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	3177	False	NA	NA	False	AATAAA	-16	NA	197499918	197486585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487287_197487380_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_114039.known	chr2	+	890	9	FSM	ENSG00000270757.1	ENST00000604458.1	890	9	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	3750.92981805845	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATATTATAGCTTCTTT	9	False	NA	NA	False	NA	NA	NA	197500412	197550726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073_197501239_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_114045.known	chr2	+	3752	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_7	137.169193899731	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAAGCATCTCATTG	1	True	NA	22	True	AGTAAA	-16	NA	197516065	197553699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_114047.known	chr2	+	1130	7	FSM	ENSG00000115540.15	ENST00000409355.2	1130	7	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_2	596.970686047481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCAAATGAAGCATTAG	19	True	NA	NA	False	NA	NA	NA	197516083	197551183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197516147_197535529_197535606_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_114048.known	chr2	+	1021	7	FSM	ENSG00000115540.15	ENST00000448447.6	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	441.517710730712	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTAGAAATGTTTTCTA	-18	True	NA	124	True	NA	NA	NA	197516046	197551012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197516147_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_114053.known	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	238.481771956591	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	-3	True	NA	18	True	AATAAA	-14	NA	197500378	197503449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
transcript_114057.known	chr2	+	570	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	284.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	-3	True	NA	45	True	AATAAA	-19	NA	197500378	197503382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073_197501239_197503038
transcript_114058.known	chr2	+	478	3	FSM	ENSG00000115541.11	ENST00000409729.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	1094	junction_1	5864.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCACTGAAGTTCTG	154	False	NA	-41	True	NA	NA	NA	197500139	197503296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197503038_197503129_197503208
transcript_11406.nic	chr1	+	1925	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.950549357115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	0	True	NA	NA	False	AATAAA	-21	NA	103525674	103555239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_114061.known	chr2	+	569	2	FSM	ENSG00000115541.11	ENST00000473395.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGTTCAAGACCAGCCT	-5	True	NA	NA	False	NA	NA	NA	197500348	197501551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073
transcript_114064.known	chr2	+	3027	1	FSM	ENSG00000247626.5	ENST00000282276.8	3027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATCTGTTCTGTTGCA	-19	True	NA	13	True	ATTAAA	-25	NA	197705368	197708395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197705400_197708400
transcript_114065.known	chr2	+	1663	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGGTTTCGTTTT	-18	True	NA	6	True	AATAAA	-20	NA	199459759	199461422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_199459800_199461400
transcript_114066.known	chr2	-	944	4	FSM	ENSG00000226124.9	ENST00000416668.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	5.90668171555645	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATTTGTTTATAAA	-12	True	NA	NA	False	AATAAA	-22	NA	199851173	199760543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199760836_199846074_199846171_199848847_199848970_199850739
transcript_114068.known	chr2	-	4287	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_6	18.8960637300417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTATATGCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	199955736	199929974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_11407.known	chr1	+	2144	15	FSM	ENSG00000185946.16	ENST00000423855.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	13.3630620956212	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	-12	True	NA	NA	False	AATAAA	-21	NA	103525698	103555239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_114076.known	chr2	-	2042	7	FSM	ENSG00000162971.11	ENST00000441832.1	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	42.687494916219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGAGCCATTGTGTGT	-11	True	NA	-11	True	AATAAA	-28	NA	199955503	199931898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199933324_199935930_199936048_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_114077.known	chr2	+	3691	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	-34	True	NA	17	True	ATTAAA	-18	NA	199911292	199928273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_199911772_199925061
transcript_114078.known	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	289	junction_2	15.9608896995124	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	32	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_114085.known	chr2	+	2648	13	FSM	ENSG00000196141.14	ENST00000409718.5	2648	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	414.511660471291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	8	True	NA	19	True	ATTAAA	-16	NA	200305892	200478530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_114087.known	chr2	+	2698	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	383.716221821399	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	94	False	NA	18	True	ATTAAA	-15	NA	200306150	200478529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_114090.known	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_7	295.837652550629	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	-5	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_114094.nic	chr2	+	2453	12	NIC	ENSG00000196141.14	novel	2648	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	357.385524641305	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	-4	True	NA	19	True	ATTAAA	-16	NA	200305880	200478530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_114096.nic	chr2	+	2071	12	NIC	ENSG00000196141.14	novel	2119	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_11	421.218872847568	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	12	False	NA	19	True	ATTAAA	-16	NA	200306511	200478530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200472993_200477635
transcript_114097.known	chr2	+	2119	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	313.609300545168	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	-1	True	NA	19	True	ATTAAA	-16	NA	200306523	200478530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_114099.nic	chr2	+	2194	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	3	864	junction_6	145.847593950524	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	5	True	NA	19	True	ATTAAA	-16	NA	200306769	200478530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_114109.nic	chr2	+	678	5	ISM	ENSG00000196141.14	ENST00000409718.5	2648	13	-12	62106	0	-2909	5prime_fragment	FALSE	canonical	3	51	junction_1	530.860151075592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTAAGATTAATATTGA	-4	True	NA	28	True	NA	NA	NA	200305880	200416424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378
transcript_11411.nic	chr1	+	461	3	ISM	ENSG00000185946.16	ENST00000531883.5	686	6	271	1585	211	-1585	internal_fragment	FALSE	canonical	3	86	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTAGATCAGTAAATC	-8	True	NA	NA	False	NA	NA	NA	103525967	103533856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_103526263_103527694_103527743_103533738
transcript_114110.nic	chr2	+	732	5	ISM	ENSG00000196141.14	ENST00000409988.7	2698	13	-15	62105	-15	-2909	5prime_fragment	FALSE	canonical	3	215	junction_1	460.334117788373	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTAAGATTAATATTGA	79	False	NA	28	True	NA	NA	NA	200306135	200416424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378
transcript_114118.known	chr2	+	1730	3	FSM	ENSG00000196141.14	ENST00000471601.5	1730	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCCAG	0	True	NA	NA	False	AATGAA	-39	NA	200306553	200390854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306602_200329430_200329481_200389222
transcript_114119.known	chr2	+	1901	3	FSM	ENSG00000196141.14	ENST00000459656.5	1901	3	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_1	114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGTAGGGCCAGGTG	20	True	NA	NA	False	NA	NA	NA	200306717	200390868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306923_200329430_200329481_200389222
transcript_11412.known	chr1	+	908	2	FSM	ENSG00000198890.9	ENST00000649727.1	908	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGATAATGGGCTAAAG	542	False	NA	NA	False	GATAAA	-14	NA	107057436	107060634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_107057908_107060197
transcript_114125.known	chr2	-	2939	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	5.02493781056044	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-1	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
transcript_114126.known	chr2	-	2556	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	11.1803398874989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-1	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
transcript_114128.known	chr2	+	1041	6	FSM	ENSG00000163535.18	ENST00000409203.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTCAATATCTTAGC	0	True	NA	NA	False	AATAAA	-13	NA	200526166	200570142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662
transcript_114129.known	chr2	+	4928	35	FSM	ENSG00000138356.14	ENST00000374700.7	4928	35	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_9	10.4401407937052	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGAGTAGATGTATCT	-28	True	NA	7	True	AATAAA	-18	NA	200586013	200671495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200586154_200593145_200593204_200595271_200595369_200597396_200597506_200599619_200599747_200602283_200602346_200603266_200603357_200604016_200604098_200604695_200604841_200605535_200605629_200608983_200609136_200609320_200609415_200611383_200611494_200612608_200612794_200613803_200613967_200615970_200616064_200620649_200620820_200621119_200621247_200623860_200623984_200627352_200627450_200634790_200634916_200636910_200637045_200638214_200638303_200641097_200641185_200642609_200642802_200650973_200651202_200656841_200656938_200659164_200659294_200659994_200660070_200661578_200661632_200662854_200662970_200666686_200666753_200668614_200668804_200669574_200669743_200670628
transcript_114134.nic	chr2	+	3120	12	NIC	ENSG00000082153.18	novel	1075	9	NA	NA	-12	596	combination_of_known_junctions	FALSE	canonical	3	388	junction_1	536.319166107165	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCTTTATACATCAGTC	-33	True	NA	-3	True	AATAAA	-15	NA	200811533	200823834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_114136.known	chr2	+	6511	12	FSM	ENSG00000082153.18	ENST00000409600.6	6511	12	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	151.562332048131	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGACTGTTCAGTTGGT	-1	True	NA	24	True	AATAAA	-34	NA	200811909	200827338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200811991_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_114142.known	chr2	+	1473	12	FSM	ENSG00000082153.18	ENST00000452790.6	1473	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	644.519604559207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTTACATCTTCCT	-9	True	NA	NA	False	AGTAAA	-41	NA	200812355	200822243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200812494_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_114147.known	chr2	+	1075	9	FSM	ENSG00000082153.18	ENST00000410110.6	1075	9	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	599.996653636501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGGTCAAGTGTAATG	-21	True	NA	NA	False	AAAACA	-28	NA	200811545	200818818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754
transcript_11415.known	chr1	+	2621	1	FSM	ENSG00000198890.9	ENST00000370078.2	2621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTAAACTTTGGTTGTA	-15	True	NA	NA	False	ATTAAA	-22	NA	107056673	107059294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_107056700_107059300
transcript_114154.known	chr2	+	265	2	FSM	ENSG00000082153.18	ENST00000460660.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTTGACTGCCATTT	12	True	NA	NA	False	ACTAAA	-34	NA	200811922	200813404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200811991_200813207
transcript_114155.known	chr2	-	1847	13	FSM	ENSG00000013441.17	ENST00000321356.9	1847	13	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_9	41.1771241778194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	-2	True	NA	57	True	ATTAAA	-14	NA	200864658	200853008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864563
transcript_114157.known	chr2	-	1682	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	22.8686511760438	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	0	True	NA	-15	True	AATAAA	-18	NA	200864656	200853080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
transcript_114158.known	chr2	-	3208	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	18.0986187318259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-4	True	NA	-15	True	AATAAA	-18	NA	200864691	200853080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
transcript_114161.known	chr2	-	1843	12	NNC	ENSG00000013441.17	novel	1847	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	39.1395046780907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	NA	False	NA	57	True	ATTAAA	-14	NA	200864744	200853008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859748_200861237_200861467_200861701_200861863_200864563
transcript_114169.known	chr2	-	1166	7	FSM	ENSG00000240344.9	ENST00000392283.9	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	37.8700262594164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-14	True	NA	59	True	AATGAA	-18	NA	200889077	200870906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
transcript_114173.nic	chr2	-	1017	7	NIC	ENSG00000240344.9	novel	1166	7	NA	NA	-15	-53	combination_of_known_junctions	FALSE	canonical	3	64	junction_6	82.8264584672206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	-1	True	NA	-43	True	AATAAA	-21	NA	200889318	200871008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200889243
transcript_114174.known	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	119.959368121043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	8	True	NA	59	True	AATGAA	-18	NA	200889269	200870906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
transcript_114176.known	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	188.746563693548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	-14	True	NA	-7	True	ATTAAA	-27	NA	200889414	200903896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_114180.nic	chr2	+	1456	7	NIC	ENSG00000196290.17	novel	1626	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	142.458668469919	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCAAGTGATTCTGTCC	NA	False	NA	35	True	AATAAA	-28	NA	200889304	200903938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_114181.nnic	chr2	+	1464	7	NIC	ENSG00000196290.17	novel	1821	9	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	144.215887551345	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCAAGTGATTCTGTCC	-23	True	NA	35	True	AATAAA	-28	NA	200889347	200903938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200889392_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_114186.known	chr2	+	1626	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	136.854444169303	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	17	True	NA	27	True	AATAAA	-20	NA	200889387	200903930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_114187.known	chr2	+	1689	7	FSM	ENSG00000196290.17	ENST00000409020.6	1689	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	128.854784760037	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	0	True	NA	22	True	AATAAA	-15	NA	200889370	200903925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200889653_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_114188.nnic	chr2	+	1835	7	NIC	ENSG00000196290.17	novel	1821	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	14	junction_1	155.875395392887	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCAAGTGATTCTGTCC	-9	True	NA	35	True	AATAAA	-28	NA	200889419	200903938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200889653_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_114193.known	chr2	+	1269	5	FSM	ENSG00000196290.17	ENST00000409588.1	1269	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	178.951110641985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	13	False	NA	22	True	AATAAA	-15	NA	200891916	200903925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200892380_200893245_200893409_200895263_200895391_200899384_200899469_200903493
transcript_114197.known	chr2	-	4288	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	23.047115875376	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTAGTGCTGGTTT	1	True	NA	NA	False	AATAAA	-31	NA	200963660	200908976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_11420.known	chr1	-	4249	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	0	0	0	multi-exon	TRUE	canonical	3	307	junction_8	37.8254601042574	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTTTACAGTATTT	15	True	NA	-11	True	AATAAA	-15	NA	108200343	108134042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_114210.known	chr2	-	9333	12	FSM	ENSG00000155744.10	ENST00000418596.7	9333	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	12.6301488968668	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGTTGATTTTAT	-20	True	NA	0	True	TATAAA	-30	NA	201071669	200973717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200981872_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
transcript_114213.nic	chr2	-	959	9	ISM	ENSG00000115942.9	ENST00000234296.7	4288	18	-41	26742	-21	-1843	5prime_fragment	FALSE	canonical	3	238	junction_6	12.4197423483742	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATGAAAAGAGATAAAACA	-1	True	NA	NA	False	AATAGA	-41	NA	200963701	200935718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_114215.known	chr2	+	547	4	FSM	ENSG00000119013.10	ENST00000454214.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	863.960390038545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	24	False	NA	29	True	ATTAAA	-18	NA	201072029	201085750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072060_201072278_201072362_201078880_201079023_201085458
transcript_114216.known	chr2	+	503	4	FSM	ENSG00000119013.10	ENST00000433898.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	873.486500563498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	2	True	NA	23	True	ATTAAA	-12	NA	201072007	201085744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072060_201072338_201072362_201078880_201079023_201085458
transcript_114217.known	chr2	+	493	3	FSM	ENSG00000119013.10	ENST00000237889.9	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	1477	junction_1	219	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	-5	True	NA	29	True	ATTAAA	-18	NA	201072000	201085750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072060_201078880_201079023_201085458
transcript_114218.known	chr2	+	739	3	FSM	ENSG00000119013.10	ENST00000684420.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATCTGCTTTTGTCATT	46	False	NA	24	True	ATTAAA	-13	NA	201072051	201085745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072362_201078880_201079023_201085458
transcript_114223.known	chr2	+	2128	10	FSM	ENSG00000003402.21	ENST00000423241.6	2128	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	40.9184675623895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	915	False	NA	1	True	AGTAAA	-6	NA	201118490	201164110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_114231.nic	chr2	+	2110	5	NIC	ENSG00000003402.21	novel	1198	5	NA	NA	-20	-4	intron_retention	FALSE	canonical	3	40	junction_1	33.0936172093653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGCATTTGTTTTTT	347	False	NA	17	True	AATAAA	-13	NA	201129308	201141594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_201129521_201129728_201130147_201133028_201133135_201135971_201136108_201140356
transcript_114232.known	chr2	+	1198	5	FSM	ENSG00000003402.21	ENST00000440180.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	29.4703240565828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTTTTTTACTGAGC	14	False	NA	25	True	AATAAA	-21	NA	201129502	201141602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_114233.known	chr2	+	717	4	FSM	ENSG00000003402.21	ENST00000461422.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	13.2748718344933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATTCCACTATCCAAAG	40	False	NA	-10	True	AATAAA	-5	NA	201129976	201140661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356
transcript_114235.known	chr2	+	5668	10	FSM	ENSG00000003400.15	ENST00000286186.11	5668	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	9.6775162612963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTTGTCTCTTC	3	True	NA	11	True	ATTAAA	-22	NA	201183140	201221665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201203729_201203767_201205881_201205974_201208074_201208184_201209069_201209563_201217587
transcript_114236.known	chr2	+	5814	9	FSM	ENSG00000003400.15	ENST00000360132.7	5814	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	11.7147076361299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTTGTC	12	True	NA	6	True	ATTAAA	-17	NA	201182897	201221660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201203729_201203767_201208074_201208184_201209069_201209563_201217587
transcript_114237.known	chr2	+	1521	8	FSM	ENSG00000003400.15	ENST00000313728.11	1521	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.2495668007736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGAATCATTGGCTATAA	54	False	NA	NA	False	NA	NA	NA	201183191	201217770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201203729_201203767_201209069_201209563_201217587
transcript_114238.known	chr2	+	3926	8	FSM	ENSG00000003400.15	ENST00000346817.9	3926	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	10.3015750727543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAAGAACACTGTTCT	31	False	NA	12	True	AGTAAA	-15	NA	201183168	201220080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201208074_201208184_201209069_201209563_201217587
transcript_114239.known	chr2	+	1126	6	FSM	ENSG00000003400.15	ENST00000374650.7	1126	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	9.8264947972306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCTTGCTGTGAGTTT	22	False	NA	16	True	ATTAAA	-18	NA	201183159	201200728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201200442
transcript_114247.known	chr2	-	6389	16	FSM	ENSG00000115993.13	ENST00000332624.8	6389	16	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_13	7.25901738070197	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCCTGTGTCTTTG	22	True	NA	0	True	AATAAA	-22	NA	201451458	201377206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_201381219_201384110_201384217_201386217_201386485_201387702_201388002_201389299_201389504_201389800_201389881_201392908_201393047_201394797_201394873_201395313_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_11425.nic	chr1	-	844	5	ISM	ENSG00000085491.17	ENST00000648874.1	3533	11	-93	22692	-69	-22692	5prime_fragment	FALSE	canonical	3	307	junction_3	21.0282548015759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGACAATGGTGGAGGCA	453	False	NA	NA	False	NA	NA	NA	108200412	108157560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_114254.known	chr2	+	2222	12	FSM	ENSG00000082146.13	ENST00000194530.8	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	27.1831863444062	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	0	True	NA	27	True	AATAAA	-16	NA	201451739	201480846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478356_201478602_201479488_201479532_201480031
transcript_114257.nic	chr2	+	2030	12	NIC	ENSG00000082146.13	novel	2222	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	99.9590825378974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	-14	True	NA	27	True	AATAAA	-16	NA	201451725	201480846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478562_201478602_201479488_201479532_201480031
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transcript_114331.nic	chr2	+	1682	14	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-35	675	-8	-447	5prime_fragment	FALSE	canonical	3	1028	junction_3	113.053791459259	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAAAAAGAAACACATT	-23	True	NA	64	True	AAAAAG	-43	NA	202265727	202302986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920
transcript_114332.nic	chr2	+	1753	14	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-35	604	-8	-376	5prime_fragment	FALSE	canonical	3	1028	junction_3	113.053791459259	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTTTTTAATTAT	-23	True	NA	NA	False	NA	NA	NA	202265727	202303057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920
transcript_114336.nic	chr2	+	1598	13	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-36	3313	-9	2442	5prime_fragment	FALSE	canonical	3	1028	junction_3	105.024864780785	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGATTAAAGTTAAAGG	-24	True	NA	NA	False	GATAAA	-34	NA	202265726	202300348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233
transcript_114341.nic	chr2	+	1948	12	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-501	5755	-474	0	5prime_fragment	FALSE	canonical	3	1028	junction_3	99.5455790783779	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACATTTAAGTGAGG	NA	False	NA	NA	False	AAAACA	-21	NA	202265261	202297906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844
transcript_114349.nic	chr2	+	448	4	ISM	ENSG00000055044.11	ENST00000472050.5	582	5	-49	2037	-20	-1981	5prime_fragment	FALSE	canonical	3	1028	junction_3	145.623563416853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTCTGAAGAAAATAGTAAA	NA	False	NA	NA	False	NA	NA	NA	202265715	202282397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350
transcript_114350.known	chr2	+	793	2	FSM	ENSG00000055044.11	ENST00000492740.5	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	1380	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGTTC	14	True	NA	NA	False	NA	NA	NA	202265764	202275683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_202265987_202275112
transcript_114353.known	chr2	+	12068	13	FSM	ENSG00000204217.16	ENST00000374580.10	12068	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	8.94271895019754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAATTGTGTTTTTTTAT	-10	True	NA	18	True	ATTAAA	-18	NA	202376326	202567749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_202377551_202464808_202464980_202467518_202467690_202513718_202513830_202514887_202514980_202518821_202519053_202520086_202520202_202530793_202530955_202532584_202532733_202542310_202542448_202552715_202552889_202555251_202556532_202559695
transcript_114358.nic	chr2	+	3604	7	ISM	ENSG00000204217.16	ENST00000374580.10	12068	13	-113	46172	-113	-46172	5prime_fragment	FALSE	canonical	3	53	junction_6	6.54896090146283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGTGAACTGGAACAC	9	True	NA	NA	False	NA	NA	NA	202376213	202521577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202377551_202464808_202464980_202467518_202467690_202513718_202513830_202514887_202514980_202518821_202519053_202520086
transcript_114360.nic	chr2	+	1778	3	ISM	ENSG00000204217.16	ENST00000374580.10	12068	13	-138	99986	-138	-7376	5prime_fragment	FALSE	canonical	3	62	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCAAGGTTGAAGCCAGG	-16	True	NA	NA	False	TATAAA	-14	NA	202376188	202467763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202377551_202464808_202464980_202467518
transcript_114361.nic	chr2	+	2516	3	ISM	ENSG00000204217.16	ENST00000374580.10	12068	13	-584	99694	-584	-7084	5prime_fragment	FALSE	canonical	3	62	junction_2	5.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTTGTTGGGAGTGA	NA	False	NA	NA	False	AAGAAA	-8	NA	202375742	202468055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202377551_202464808_202464980_202467518
transcript_114362.nnic	chr2	+	2391	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	0	-3322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.2478040019199	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCGTACATTATGTGATT	-24	True	NA	4	True	ATTAAA	-7	NA	202634968	202766435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_202635348_202635616_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
transcript_114363.nnic	chr2	+	5713	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.2478040019199	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	-24	True	NA	21	True	AATAAA	-16	NA	202634968	202769757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_202635348_202635616_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
transcript_114364.known	chr2	-	7961	13	FSM	ENSG00000163596.17	ENST00000358299.7	7961	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	6.43072054024016	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGACACTTTCTCATAAA	0	True	NA	NA	False	AATAAA	-3	NA	202871766	202773175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202779649_202785917_202786008_202788829_202789088_202796889_202796965_202811745_202811790_202814701_202814785_202815910_202816010_202817417_202817544_202819700_202819900_202821357_202821482_202825694_202825768_202828847_202829017_202871618
transcript_114369.known	chr2	-	8068	13	FSM	ENSG00000138442.11	ENST00000261015.5	8068	13	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_3	50.403924009501	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTTAAAGGTGTTAAAT	-13	True	NA	NA	False	AGTAAA	-25	NA	202911673	202874260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_114372.nic	chr2	-	2026	6	ISM	ENSG00000138442.11	ENST00000688520.1	8621	13	-292	21429	-292	308	5prime_fragment	FALSE	canonical	3	563	junction_4	39.3974618471799	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGGGCATGGTGGCGC	NA	False	NA	NA	False	ACTAAA	-18	NA	202912518	202895689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_114373.nic	chr2	+	858	5	ISM	ENSG00000144426.19	ENST00000478884.5	1012	7	-188	5984	16	0	5prime_fragment	FALSE	canonical	2	9	junction_2	3.03108891324554	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAGGTGTGAACTAAT	-11	True	NA	1	True	NA	NA	NA	203014736	203056504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426
transcript_114374.known	chr2	+	10552	13	FSM	ENSG00000119004.17	ENST00000356079.9	10552	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	32.7706677787723	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTCATTTGTTCCT	-5	True	NA	15	True	AATATA	-35	NA	203239017	203306026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_114379.known	chr2	+	1730	12	FSM	ENSG00000119004.17	ENST00000449301.5	1730	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	50.6941892769406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGAATCATGTTTGTT	-10	True	NA	17	True	AAAAAG	-17	NA	203238976	203297242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_114380.known	chr2	+	2636	12	FSM	ENSG00000119004.17	ENST00000431118.5	2636	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.148015586924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGGGAGGATCACTT	4	True	NA	NA	False	NA	NA	NA	203239026	203298286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203245845_203245896_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_114386.known	chr2	+	1359	11	FSM	ENSG00000119004.17	ENST00000461371.5	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	42.9855789771407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	-5	True	NA	4	True	TATAAA	-24	NA	203238981	203297014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_114394.known	chr2	+	1812	13	FSM	ENSG00000119004.17	ENST00000429815.6	1812	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	52.8994722720999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGCAGAAGTTG	-5	True	NA	1	True	AAAAAG	-1	NA	203238981	203297226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272645_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_114398.known	chr2	+	6567	12	FSM	ENSG00000138443.17	ENST00000261018.12	6567	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	200.62316140606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	2	True	NA	15	True	AATAAA	-16	NA	203328393	203432169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203382188_203382207_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_11441.known	chr1	+	3728	7	FSM	ENSG00000134186.12	ENST00000370021.1	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	124.691619606131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCTTTTTTCTTTTT	11	True	NA	11	True	ATTAAA	-17	NA	108692340	108701803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_114413.known	chr2	+	2240	10	FSM	ENSG00000138443.17	ENST00000424558.5	2240	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	200.966983345677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCATCCCTTCATGT	3	True	NA	NA	False	NA	NA	NA	203328394	203427948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
transcript_114415.known	chr2	+	6484	10	FSM	ENSG00000138443.17	ENST00000261017.9	6484	10	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	120.580488973082	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	-11	True	NA	19	True	AATAAA	-20	NA	203328279	203432173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_114424.nic	chr2	+	1844	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	-51	0	combination_of_known_junctions	TRUE	canonical	3	205	junction_7	115.274400887621	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	NA	False	NA	-8	True	NA	NA	NA	203328228	203427569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_114425.nic	chr2	+	4045	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	-51	1174	combination_of_known_junctions	FALSE	canonical	3	205	junction_7	115.274400887621	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCACAGCTCACCACTA	NA	False	NA	NA	False	NA	NA	NA	203328228	203429770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_114429.known	chr2	+	1676	9	FSM	ENSG00000138443.17	ENST00000430418.5	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	232.42145850803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	0	True	NA	-49	True	ATTAAA	-27	NA	203328391	203427528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
transcript_114443.known	chr2	+	717	2	FSM	ENSG00000138443.17	ENST00000494215.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGATTTATGTTTACTG	28	False	NA	NA	False	GATAAA	-43	NA	203328457	203367419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876
transcript_114447.known	chr2	-	492	4	FSM	ENSG00000173166.18	ENST00000420371.2	492	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATCTTTGCTCTATAGA	446	False	NA	NA	False	NA	NA	NA	203535335	203490045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_203490087_203491213_203491320_203495233_203495354_203535110
transcript_114454.known	chr2	+	2386	10	FSM	ENSG00000118257.17	ENST00000417189.5	2386	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	45.7742717103974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCCAGGCACTGTGC	7	True	NA	12	True	AATAAA	-23	NA	205682506	205743698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_205682906_205683090_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202
transcript_114455.nic	chr2	+	2622	9	ISM	ENSG00000118257.17	ENST00000357118.8	3367	16	-809	33463	-49	0	5prime_fragment	TRUE	canonical	3	141	junction_4	12.3332629502496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACTTTGTGCCAGGCAC	-2	True	NA	7	True	AATAAA	-18	NA	205682450	205743693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202
transcript_114459.known	chr2	+	1072	2	FSM	ENSG00000118257.17	ENST00000478013.1	1072	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTATGGTGGAAAGAGCC	158	False	NA	16	True	AATAAA	-16	NA	205682657	205697909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_205683364_205697543
transcript_114462.known	chr2	-	14128	11	FSM	ENSG00000114933.16	ENST00000403263.6	14128	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	5.01597448159378	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTTTTAGTTTAATT	-34	True	NA	-6	True	AATAAA	-16	NA	206086174	205993720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_206005534_206007283_206007442_206009576_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206063046_206063150_206063245_206085900
transcript_114466.nnic	chr2	-	506	4	NNC	ENSG00000114933.16	novel	14128	11	NA	NA	305	6008	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	5.55777733351102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGGAAGAAAAAGAATGA	-19	True	NA	NA	False	NA	NA	NA	206085869	206056897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_206056944_206062798_206063046_206063150_206063245_206085750
transcript_114468.known	chr2	+	752	2	FSM	ENSG00000227946.2	ENST00000420509.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTAATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	206084604	206086564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206084749_206085956
transcript_114469.known	chr2	-	11660	19	FSM	ENSG00000023228.14	ENST00000233190.11	11660	19	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_5	38.0975437463647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGGATCAATTAACATG	-4	True	NA	-31	True	AATAAA	-17	NA	206159444	206114816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159340
transcript_11447.known	chr1	+	4831	6	FSM	ENSG00000134186.12	ENST00000370025.9	4831	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	41.5162618741139	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCAATCTTAAACTTT	-20	True	NA	NA	False	ATTAAA	-20	NA	108692309	108702928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_114472.known	chr2	-	2631	18	FSM	ENSG00000023228.14	ENST00000423725.5	2631	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	100.988916449652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGATTTAAGCACC	9	False	NA	76	True	ATTAAA	-21	NA	206159509	206123818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206153617_206153683_206159340
transcript_114475.known	chr2	+	912	8	FSM	ENSG00000114942.14	ENST00000429769.5	912	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	1806.99778073794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATATGCTGGAGGAGC	10	True	NA	-93	True	GATAAA	-6	NA	206159635	206162801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206160886_206161133_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_114477.known	chr2	+	844	7	FSM	ENSG00000114942.14	ENST00000236957.9	844	7	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	1129.30106211271	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	-41	True	NA	34	True	AATAAA	-15	NA	206159584	206162928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_114480.known	chr2	+	880	7	FSM	ENSG00000114942.14	ENST00000392221.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	1300.95752129815	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	-32	True	NA	33	True	AATAAA	-14	NA	206159593	206162927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_114483.known	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3535	junction_2	182.164101842267	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	-5	True	NA	34	True	AATAAA	-15	NA	206159894	206162928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_114486.known	chr2	+	515	5	FSM	ENSG00000114942.14	ENST00000445505.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	1473.18031822313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAATATGAATCAAAGAAA	-19	True	NA	NA	False	NA	NA	NA	206159606	206162077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037
transcript_114490.known	chr2	+	701	3	FSM	ENSG00000114942.14	ENST00000479587.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	1543.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTAAATCATAGTGAG	-11	True	NA	NA	False	AATGAA	-26	NA	206159614	206161117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159958_206160060_206160587
transcript_114491.known	chr2	+	1025	2	FSM	ENSG00000114942.14	ENST00000460760.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	3914	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGACAGTGTTTACCTG	12	True	NA	NA	False	NA	NA	NA	206159637	206161190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206160060_206160587
transcript_114492.nic	chr2	-	1173	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-28	16532	-7	1830	5prime_fragment	FALSE	canonical	2	10	junction_4	7.43303437365925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAATAAGATACAATTT	9	True	NA	-34	True	AATAAA	-1	NA	206765314	206754788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_114494.known	chr2	-	2334	12	FSM	ENSG00000138400.13	ENST00000374412.8	2334	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.19493897435414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATATTTTTACTATAT	-5	True	NA	NA	False	AATAAA	-19	NA	206765328	206737762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_206738512_206739592_206739662_206741053_206741105_206745621_206745674_206746286_206746427_206749019_206749184_206750933_206751076_206755008_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_114495.known	chr2	+	3188	12	FSM	ENSG00000118246.14	ENST00000236980.10	3188	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	70.6361881359701	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGGACTATTTTTTC	NA	False	NA	25	True	ATTAAA	-28	NA	206765356	206792509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206765655_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_114500.known	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.51476551255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	5	True	NA	-3	True	AATAAA	-4	NA	206765605	206791806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_114509.nnic	chr2	-	2190	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGCTTTCTGTTTGGTT	5	True	NA	-3	True	AATAAA	-17	NA	206812283	206805303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_-_206807239_206812028
transcript_114511.nnic	chr2	-	618	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	5	True	NA	1	True	AATAAA	-22	NA	206812283	206806875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_-_206807239_206812028
transcript_114515.nic	chr2	-	3426	5	NIC	ENSG00000118263.15	novel	1788	5	NA	NA	72	54	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	14.3592304807744	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACCCGTTAACACACAC	1122	False	NA	NA	False	AATACA	-19	NA	207166114	207079035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466_207165707_207165912
transcript_114517.known	chr2	-	8365	4	FSM	ENSG00000118263.15	ENST00000309446.11	8365	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1.63299316185545	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCTAGTGTGACTGAA	-4	True	NA	NA	False	AATAAA	-16	NA	207165948	207074136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466
transcript_114518.known	chr2	-	539	4	FSM	ENSG00000118263.15	ENST00000458272.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACTATATTTAAAATATAT	1665	False	NA	NA	False	NA	NA	NA	207165571	207081015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207081265_207088457_207088582_207124343_207124405_207165466
transcript_114521.known	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	57.4280800218848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	152	False	NA	21	True	CATAAA	-18	NA	207529891	207603431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_114531.known	chr2	+	10095	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	37.3188139890729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	10	True	NA	NA	False	ATTAAA	-18	NA	207529961	207605988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_114537.known	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	76.6401610496369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	-3	True	NA	14	True	ATTAAA	-15	NA	207529736	207597789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_114540.known	chr2	-	869	5	FSM	ENSG00000144401.14	ENST00000432416.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	246.536381696495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGGATTACAATCTTT	274	False	NA	NA	False	AATAAA	-23	NA	207625121	207580630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207580999_207581793_207581947_207621805_207621918_207624228_207624405_207625061
transcript_114552.known	chr2	-	4805	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	210.073003183814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	-3	True	NA	-15	True	AATAAA	-16	NA	207625249	207609114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
transcript_114553.known	chr2	-	1103	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	51.3290041464538	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGGCCGGTATAAAGAA	17	False	NA	-26	True	AATAAA	-19	NA	207625378	207612742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
transcript_114558.known	chr2	-	1003	4	FSM	ENSG00000144401.14	ENST00000442521.1	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	264.126653120977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATTTAATGAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	207625927	207612979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625676
transcript_11456.known	chr1	+	2043	5	FSM	ENSG00000134186.12	ENST00000467302.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	134.444226354277	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	-3	True	NA	NA	False	NA	NA	NA	108692326	108697504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276
transcript_114565.nic	chr2	-	3017	3	ISM	ENSG00000144401.14	ENST00000406927.6	1103	4	17	6431	17	1560	5prime_fragment	FALSE	canonical	3	491	junction_2	62	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTGCTATGTAGATATTA	-24	True	NA	NA	False	ATTAAA	-15	NA	207625361	207619173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_207621918_207624228_207624405_207625264
transcript_114566.known	chr2	+	3813	10	FSM	ENSG00000163249.13	ENST00000295414.8	3813	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	17.5499287747842	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTAGTGTGTTTGTAA	-2	True	NA	NA	False	AATAAA	-18	NA	207711639	207756174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_114569.known	chr2	+	2124	9	FSM	ENSG00000163249.13	ENST00000650811.1	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	41.6713330720293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAGCCTCAGCCACAC	154	False	NA	NA	False	NA	NA	NA	207711795	207754742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_114571.known	chr2	+	2619	8	FSM	ENSG00000163249.13	ENST00000339882.9	2619	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	61.8332187321306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGTCTGTAGTCCC	109	False	NA	NA	False	AATAAA	-16	NA	207711750	207755244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_114577.nnic	chr2	-	2022	4	Fusion	ENSG00000272851.1_ENSG00000163251.4	novel	7039	2	NA	NA	-3	-18	multi-exon	TRUE	non_canonical	0	0	junction_1	47.2440472440709	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGCATTGACAAGG	-8	True	NA	-20	True	ATTAAA	-15	NA	207769909	207753889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_-_207754769_207754947_207755371_207760555_207760631_207769264
transcript_114578.nnic	chr2	-	2201	3	Fusion	ENSG00000272851.1_ENSG00000163251.4	novel	7039	2	NA	NA	-3	-18	multi-exon	FALSE	canonical	3	18	junction_2	45	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGCATTGACAAGG	-8	True	NA	-20	True	ATTAAA	-15	NA	207769909	207753889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_-_207755371_207760555_207760631_207769264
transcript_114583.known	chr2	-	7039	2	FSM	ENSG00000163251.4	ENST00000295417.4	7039	2	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	0	712	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTAGAAGTCTTTTT	-5	True	NA	-29	True	AATAAA	-3	NA	207769906	207762597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207768995_207769264
transcript_114585.nic	chr2	-	2758	3	ISM	ENSG00000178385.15	ENST00000457206.1	3689	8	-33	75859	-4	-75859	5prime_fragment	FALSE	canonical	3	8	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCAGGTGCAGTGGCT	-2	True	NA	NA	False	AGTAAA	-24	NA	208025531	207975899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_207977587_208001029_208001958_208025388
transcript_114586.nnic	chr2	-	705	3	FSM	ENSG00000229150.2	ENST00000440809.2	621	3	-84	0	-84	0	multi-exon	TRUE	canonical	3	34	junction_2	56.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	NA	False	NA	-7	True	AATAAA	-24	NA	208112736	208108157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208108497_208112265_208112509_208112613
transcript_114587.known	chr2	-	423	2	FSM	ENSG00000229150.2	ENST00000689457.1	729	2	143	163	3	-84	multi-exon	FALSE	canonical	3	147	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGGCCGGGGGACTG	144	False	NA	NA	False	NA	NA	NA	208112508	208108316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208108497_208112265
transcript_114588.known	chr2	-	642	3	FSM	ENSG00000118231.5	ENST00000264376.5	642	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGCTTGTGTCTTTC	-2	True	NA	-3	True	AATAAA	-24	NA	208124524	208121606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208121946_208124111_208124355_208124464
transcript_11459.nic	chr1	+	2025	4	ISM	ENSG00000134186.12	ENST00000370022.9	1591	5	-32	0	-18	0	intron_retention	TRUE	canonical	3	245	junction_2	41.6519974177576	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	-38	True	NA	NA	False	NA	NA	NA	108692291	108697504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276
transcript_114590.known	chr2	-	631	3	FSM	ENSG00000182187.4	ENST00000260988.5	631	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAGAGCCCTGTCTTTC	-2	True	NA	NA	False	AATAAA	-24	NA	208146158	208142572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208142914_208145773_208146017_208146111
transcript_114591.known	chr2	-	1195	9	FSM	ENSG00000188674.11	ENST00000341287.9	1195	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.14174095030078	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCTTTCTCTCAGTAG	-5	True	NA	63	True	AATAAA	-17	NA	208190030	208165346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208165816_208170944_208171064_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945_208187062_208189952
transcript_114599.known	chr2	-	2441	10	FSM	ENSG00000138413.14	ENST00000415913.5	2441	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	1681.74380397914	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGATTTTAATTAAAAT	790	False	NA	-41	True	ATTAAA	-23	NA	208254322	208236264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254030
transcript_114600.known	chr2	-	2298	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	1679.94523720269	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	654	False	NA	-8	True	ATTAAA	-16	NA	208254458	208236231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
transcript_114601.known	chr2	-	2318	10	FSM	ENSG00000138413.14	ENST00000345146.7	2318	10	0	0	0	0	multi-exon	FALSE	canonical	3	4400	junction_2	506.555250907759	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGCGTTTCTGTTTA	2	True	NA	-5	True	ATTAAA	-19	NA	208255071	208236228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
transcript_114617.known	chr2	-	1614	4	FSM	ENSG00000138413.14	ENST00000462386.5	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_3	331.365189615459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTGCTTCTTTACTT	12	True	NA	NA	False	ACTAAA	-23	NA	208255061	208247381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938
transcript_114620.known	chr2	-	556	3	FSM	ENSG00000138413.14	ENST00000481557.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_2	372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAAAGGGA	-1	True	NA	NA	False	TTTAAA	-2	NA	208255113	208251260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208251568_208253885_208253960_208254938
transcript_114623.known	chr2	+	464	2	FSM	ENSG00000231908.2	ENST00000440574.2	497	2	33	0	33	0	multi-exon	FALSE	canonical	3	57	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGCTTGTATATTGCT	19	False	NA	26	True	AATAAA	-31	NA	208255246	208256181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_208255432_208255902
transcript_11463.known	chr1	+	2489	19	FSM	ENSG00000116266.11	ENST00000370008.4	2489	19	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_9	68.2316316348624	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	-10	True	NA	6	True	AATAAA	-17	NA	108746673	108809523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
transcript_114631.known	chr2	+	2241	15	FSM	ENSG00000078018.21	ENST00000199940.10	2241	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.87562760699626	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGTAATTGTTACAATT	-23	True	NA	NA	False	AATAAA	-17	NA	209424057	209730518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_209424277_209507591_209507642_209580035_209580101_209625052_209625130_209653141_209653433_209678571_209678686_209680749_209680828_209700276_209700339_209704449_209704621_209705579_209705728_209709913_209710255_209723594_209723688_209725708_209725791_209729849_209729963_209730181
transcript_114636.known	chr2	+	1128	7	FSM	ENSG00000197713.15	ENST00000436630.6	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_3	227.327712540484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCATATTAGCTACACTA	NA	False	NA	NA	False	NA	NA	NA	210002583	210020100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_114639.known	chr2	+	925	7	FSM	ENSG00000197713.15	ENST00000429907.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	265.151948051595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAGGTCAGAAATTG	10	True	NA	17	True	ATTAAA	-18	NA	210002641	210019940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210018152_210018222_210019668
transcript_114641.known	chr2	+	858	6	FSM	ENSG00000197713.15	ENST00000435437.2	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	233.801967485306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	25	False	NA	38	True	ATTAAA	-39	NA	210002656	210019961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019672
transcript_114644.known	chr2	+	2130	6	FSM	ENSG00000197713.15	ENST00000454822.5	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	257.629656677953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTTGAGGCTACTAT	-4	True	NA	NA	False	AATAAA	-17	NA	210002627	210021226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_114645.known	chr2	+	796	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	234.523319736013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	11	True	NA	38	True	ATTAAA	-39	NA	210002642	210019961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_114647.known	chr2	-	2515	11	FSM	ENSG00000115361.8	ENST00000233710.4	2515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.19089023002066	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTAACATGGAAACAGAT	-1	True	NA	NA	False	AATAAA	-17	NA	210225447	210187922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210189055_210192803_210192891_210195210_210195339_210203330_210203445_210204580_210204683_210205631_210205797_210210195_210210263_210216346_210216512_210217964_210218103_210220646_210220803_210225186
transcript_114649.known	chr2	-	4592	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_9	40.0844786931147	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCATGTGCTTTTTGT	-28	True	NA	-8	True	AATAAA	-18	NA	210476759	210431250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
transcript_114650.known	chr2	-	1270	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	103.005932946711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATAGCATGCCACCTGC	811	False	NA	NA	False	NA	NA	NA	210476775	210434486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
transcript_114656.known	chr2	-	1647	10	FSM	ENSG00000115365.12	ENST00000233714.8	1647	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	118.437773420643	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTATTATTGGGTA	26	True	NA	NA	False	GATAAA	-7	NA	210476705	210434114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476646
transcript_114657.known	chr2	-	4781	9	FSM	ENSG00000115365.12	ENST00000443314.5	4781	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	22.0794021658196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-8	True	NA	-6	True	AATAAA	-20	NA	210476739	210431248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315
transcript_114658.known	chr2	-	4503	10	FSM	ENSG00000115365.12	ENST00000441020.7	4503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	119.366020766298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-26	True	NA	-6	True	AATAAA	-20	NA	210476757	210431248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476708
transcript_114659.known	chr2	+	4880	40	FSM	ENSG00000021826.18	ENST00000673510.1	4880	40	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	9.71859141369796	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGTCACTTCTTCAAAA	-5	True	NA	NA	False	ATTAAA	-2	NA	210477681	210678142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210477767_210519550_210519671_210556718_210556860_210573297_210573408_210576345_210576491_210577420_210577511_210579713_210579771_210582616_210582710_210588057_210588148_210590105_210590235_210590799_210590907_210591830_210591970_210592878_210592957_210594507_210594607_210595486_210595583_210599371_210599562_210600554_210600713_210602201_210602331_210605101_210605247_210606730_210606942_210608360_210608560_210612116_210612294_210616422_210616542_210637701_210637844_210639149_210639216_210639995_210640060_210642483_210642666_210647862_210648058_210648472_210648541_210650362_210650439_210654024_210654103_210656524_210656633_210658598_210658689_210660484_210660656_210663122_210663198_210668185_210668285_210674901_210674962_210675727_210675841_210677006_210677137_210677886
transcript_114663.nnic	chr2	-	2212	10	NNC	ENSG00000178568.15	novel	12097	28	NA	NA	73345	-7415	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	43.1580500480573	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAACATTTTCTATAACA	NA	False	NA	-24	True	AATAAA	-19	NA	211592009	211383135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_211384061_211386852_211387151_211387944_211387993_211420440_211420612_211422006_211422105_211424154_211424302_211428407_211428484_211430944_211431101_211561902_211562089_211591902
transcript_114667.nnic	chr2	-	2081	2	NNC	ENSG00000178568.15	novel	2680	20	NA	NA	73197	1499	at_least_one_novel_splicesite	FALSE	canonical	3	250	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTTCAAATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	211592157	211560262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_211562089_211591902
transcript_114668.known	chr2	+	1250	5	FSM	ENSG00000144451.20	ENST00000432529.6	1250	5	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_3	31.7411404962078	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATACTGTTTTCCAT	NA	False	NA	25	True	AATAAA	-21	NA	213284391	213317978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_213284620_213296063_213296111_213297261_213297358_213310058_213310178_213317218
transcript_114673.known	chr2	-	5478	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_8	20.4550727204769	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTTTAAGAGCTGTAA	0	True	NA	-11	True	AATAAA	-18	NA	214809683	214725645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
transcript_114676.known	chr2	-	2261	10	FSM	ENSG00000138376.11	ENST00000455743.5	2261	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	45.7588957822397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGCTTCCTCTTG	10	True	NA	NA	False	NA	NA	NA	214809673	214728703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214797060_214797118_214809411
transcript_114677.known	chr2	-	1456	10	FSM	ENSG00000138376.11	ENST00000620057.4	1456	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	46.7390972300123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTATACCAGATGAACA	0	True	NA	-118	True	NA	NA	NA	214809642	214728676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214792296_214792446_214797060_214797118_214809411
transcript_114679.known	chr2	-	1111	6	FSM	ENSG00000138376.11	ENST00000613374.5	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	57.1153219372875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTGAATCAAAAAAAAAAA	0	True	NA	-3	True	NA	NA	NA	214809642	214728561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214809411
transcript_114681.nic	chr2	-	766	4	ISM	ENSG00000138376.11	ENST00000613706.5	2131	11	-24	52661	-24	-349	5prime_fragment	FALSE	canonical	3	94	junction_1	21.9544984001001	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAGCTGAAATCAACCAA	18	False	214809725	NA	False	AAAAAG	-38	NA	214809707	214781245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_214781510_214792296_214792446_214797060_214797118_214809411
transcript_114693.known	chr2	+	1972	16	FSM	ENSG00000138363.15	ENST00000236959.14	1972	16	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_10	57.6537557801359	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATAGTTTTTGGTAGTTG	-29	True	NA	28	True	AATAAA	-23	NA	215312058	215349764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_215312162_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_114699.known	chr2	+	2187	16	FSM	ENSG00000138363.15	ENST00000443953.5	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	199.520246814425	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	-16	True	NA	27	True	AATAAA	-22	NA	215312071	215349763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_215312391_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_11470.known	chr1	+	7152	15	FSM	ENSG00000121957.15	ENST00000264126.9	7152	15	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	15.3749066697018	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGTTGAAGTTGGCA	-12	True	NA	10	True	AGTAAA	-23	NA	108876984	108934545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999_108924215_108929700
transcript_114722.known	chr2	+	2275	15	FSM	ENSG00000138363.15	ENST00000435675.5	2275	15	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_9	59.4534631936129	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	3	True	NA	27	True	AATAAA	-22	NA	215312090	215349763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_114724.known	chr2	-	8708	47	FSM	ENSG00000115414.21	ENST00000323926.10	8708	47	0	0	0	0	multi-exon	TRUE	canonical	3	2082	junction_31	393.568880388917	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGAATAGTATAATAT	0	True	NA	-17	True	AATAAA	-20	NA	215436068	215360453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930_215393204_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
transcript_114731.known	chr2	-	8390	46	FSM	ENSG00000115414.21	ENST00000354785.11	8390	46	0	0	0	0	multi-exon	FALSE	canonical	3	2082	junction_30	388.542764063588	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTGAAGTTCATCTATT	0	True	NA	-17	True	AATAAA	-15	NA	215436068	215360864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930_215393204_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
transcript_114737.nic	chr2	-	6169	32	ISM	ENSG00000115414.21	ENST00000354785.11	8390	46	0	20608	0	686	5prime_fragment	FALSE	canonical	3	2082	junction_16	215.375581250427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTATAACAATTTGAATC	0	True	NA	NA	False	AAAACA	-9	NA	215436068	215381472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930_215393204_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
transcript_11474.nic	chr1	+	2458	14	ISM	ENSG00000121957.15	ENST00000642355.1	5609	16	0	9974	0	0	5prime_fragment	FALSE	canonical	3	135	junction_1	15.3942277662996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCAGCTGCTATTC	-16	True	NA	10	True	AGTAAA	-18	NA	108876980	108924361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999
transcript_114741.known	chr2	-	2388	13	FSM	ENSG00000115414.21	ENST00000426059.1	2388	13	0	0	0	0	multi-exon	FALSE	canonical	3	2199	junction_8	167.724642064175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATTTTGGTTTTGGTTT	-5	True	NA	NA	False	ATTAAA	-17	NA	215436073	215414660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
transcript_114744.nic	chr2	-	2545	6	ISM	ENSG00000115414.21	ENST00000426059.1	2388	13	-111	12200	-111	-7572	5prime_fragment	FALSE	canonical	3	2199	junction_1	215.727235183692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAATGTCAGTCTACCA	243	False	NA	NA	False	AATAAA	-23	NA	215436184	215426860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
transcript_114748.known	chr2	-	1867	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.0707126868877	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCAGTGCCTGATTT	-8	True	NA	-6	True	TATAAA	-37	NA	216081809	216038387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
transcript_114752.nnic	chr2	-	2546	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTGGATGTGTGTTATA	-23	True	NA	-2	True	ATTAAA	-20	NA	216013634	215942586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_215943588_215944269_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_114755.nnic	chr2	-	2194	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGTCGTATTGTTTT	-23	True	NA	-31	True	AATAAA	-12	NA	216013634	215942805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_215943606_215944420_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_114756.nnic	chr2	-	2323	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGATGTCGTATTGTTT	-23	True	NA	-32	True	AATAAA	-11	NA	216013634	215942806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_215943596_215944280_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_114757.nnic	chr2	-	2325	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGGATGTCGTATTGTT	-23	True	NA	-33	True	AATAAA	-10	NA	216013634	215942807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_215943588_215944269_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_114759.known	chr2	-	3148	5	FSM	ENSG00000118242.16	ENST00000263268.11	3148	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	6.49519052838329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTGTGTTATATTT	-10	True	NA	1	True	ATTAAA	-23	NA	216013551	215942583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_114760.known	chr2	-	742	4	FSM	ENSG00000115425.14	ENST00000487318.6	742	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.4736562107401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATTAGCCAGGCA	0	True	NA	NA	False	NA	NA	NA	216081801	216063888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_216064147_216065311_216065478_216066384_216066519_216081617
transcript_114761.known	chr2	+	584	3	FSM	ENSG00000163449.11	ENST00000433112.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGACATCCATGTCACAT	NA	False	NA	NA	False	AAAAAG	-9	NA	216081865	216099998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216081974_216095837_216096235_216099919
transcript_114764.known	chr2	+	3342	3	FSM	ENSG00000163449.11	ENST00000295658.8	3342	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGAGGCTCTTC	-9	True	NA	15	True	AATAAA	-27	NA	216081894	216102783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216081976_216095837_216096235_216099919
transcript_114765.known	chr2	-	2618	6	FSM	ENSG00000118242.16	ENST00000620139.4	2618	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	46.6630474787063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGTCGTATTGTTTTA	-2	True	NA	-30	True	AATAAA	-13	NA	216013613	215942804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215943740_215944110_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_114769.known	chr2	+	3379	21	FSM	ENSG00000079246.16	ENST00000392132.7	3379	21	0	0	0	0	multi-exon	FALSE	canonical	3	4274	junction_7	355.893382911231	621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	2	True	NA	44	True	ATTAAA	-28	NA	216109347	216206293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_114770.known	chr2	-	4903	4	FSM	ENSG00000144583.5	ENST00000273067.5	4903	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	5.24933858267454	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCCCTTTCCATATG	5	True	NA	1	True	AATAAA	-17	NA	216372483	216257864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_216259680_216277671_216277865_216283573_216283730_216369744
transcript_114774.known	chr2	+	3201	18	FSM	ENSG00000138375.13	ENST00000357276.9	3201	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.1599675414008	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	-11	True	NA	44	True	AATAAA	-22	NA	216412483	216483053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216412649_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_114775.nic	chr2	+	3174	18	NIC	ENSG00000138375.13	novel	3201	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.2780990057323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	-29	True	NA	44	True	AATAAA	-22	NA	216412465	216483053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_216412604_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_114777.known	chr2	+	3056	18	FSM	ENSG00000138375.13	ENST00000358207.9	3056	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	38.2326695931824	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	185	False	NA	8	True	AATAAA	-17	NA	216412742	216483017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216412799_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_11478.known	chr1	-	4994	13	FSM	ENSG00000121940.17	ENST00000369969.7	4994	13	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_12	39.6347035086958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATAAAATTTTTCCTTT	-24	True	NA	NA	False	AAGAAA	-19	NA	108963484	108929504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
transcript_114788.known	chr2	+	2992	4	FSM	ENSG00000197756.10	ENST00000491306.6	2992	4	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	1836.44003441441	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCATTTCATTGTATC	0	True	NA	-59	True	TATAAA	-26	NA	216498843	216504086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216501340
transcript_114789.known	chr2	+	425	4	FSM	ENSG00000197756.10	ENST00000600880.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	5368.00033118065	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGATCATGCCTCAT	6	True	NA	NA	False	NA	NA	NA	216498849	216529454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216529269
transcript_114790.known	chr2	+	1701	3	FSM	ENSG00000197756.10	ENST00000490649.1	1701	3	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	1914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	11	False	NA	17	True	AATAAA	-23	NA	216498824	216501467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216498878_216499269_216499399_216499948
transcript_114791.known	chr2	+	2082	2	FSM	ENSG00000197756.10	ENST00000478153.1	2082	2	0	0	0	0	multi-exon	FALSE	canonical	3	12844	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAAATTGCCTTGG	11	False	NA	6	True	AATAAA	-12	NA	216498824	216501456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216499399_216499948
transcript_114792.known	chr2	+	742	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	12844	junction_1	66	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	23	False	NA	17	True	AATAAA	-23	NA	216498866	216501467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216499399_216499948_216500032_216501340
transcript_114793.nnic	chr2	+	1017	5	NNC	ENSG00000115457.10	novel	1414	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2311.71667814203	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	-3	True	NA	16	True	ATTAAA	-16	NA	216633418	216664436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_216633492_216633889_216633966_216660556_216660787_216661857_216661999_216663939
transcript_114794.nnic	chr2	+	1189	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	2536.8375763712	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	NA	False	NA	16	True	ATTAAA	-16	NA	216632954	216664436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_216633276_216660556_216660787_216661857_216661999_216663939
transcript_114797.known	chr2	+	597	4	FSM	ENSG00000180871.8	ENST00000454148.1	597	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCCTGCATCAGTGTGG	-5	True	NA	NA	False	NA	NA	NA	218126018	218135208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218126069_218126290_218126354_218129313_218129366_218134776
transcript_114808.known	chr2	+	1410	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	2728	junction_1	276.943116903093	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAATTTGCTGGGTTT	19	True	NA	30	True	AATAAA	-19	NA	218217188	218254348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_11481.known	chr1	-	2383	13	FSM	ENSG00000121940.17	ENST00000369970.8	2383	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	51.94842527824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGAAGCTTTTAGGAAA	-44	True	NA	NA	False	NA	NA	NA	108963504	108931985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108943908_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
transcript_114819.nic	chr2	+	1020	10	ISM	ENSG00000163466.16	ENST00000315717.10	1410	11	-81	4440	-33	-4200	5prime_fragment	TRUE	canonical	3	2728	junction_1	275.084229524946	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAATCACGTAAGTT	NA	False	NA	NA	False	AAAAAG	-4	NA	218217107	218249908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820
transcript_114833.known	chr2	+	1039	5	FSM	ENSG00000163466.16	ENST00000489598.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	2728	junction_1	201.763475386404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTGGAACATAATATTT	-23	True	NA	NA	False	NA	NA	NA	218217146	218235052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351
transcript_114834.known	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	2964	junction_9	229.324989081617	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	40	False	NA	38	True	AATAAA	-27	NA	218217209	218254356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_114835.known	chr2	+	2003	2	FSM	ENSG00000179921.15	ENST00000522678.5	2003	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTATCTCATTCCATA	1	True	NA	NA	False	AATAAA	-16	NA	218261014	218263859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218261217_218262058
transcript_114841.known	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	336.908429695667	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	9156	False	NA	-6	True	AATAAA	-15	NA	218270178	218264128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
transcript_114843.known	chr2	-	1833	10	FSM	ENSG00000127837.10	ENST00000489767.5	1833	10	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_9	47.1451658886324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAGATACTAGTTAAAG	21	True	NA	-60	True	NA	NA	NA	218270116	218264182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_114850.known	chr2	-	2270	8	FSM	ENSG00000127837.10	ENST00000475678.5	2270	8	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_7	53.3918896233409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGAGTCTGTGTGGATT	9246	False	NA	-7	True	AATAAA	-14	NA	218270088	218264129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_11486.known	chr1	-	1937	12	FSM	ENSG00000121940.17	ENST00000674849.1	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	52.2130093665117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCCAATATGTCATTAA	35	True	NA	-57	True	NA	NA	NA	108963425	108932336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963360
transcript_114866.known	chr2	-	1761	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_1	37.415913957619	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	9594	False	NA	-39	True	NA	NA	NA	218269740	218264161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
transcript_114870.nic	chr2	-	2542	13	NIC	ENSG00000135926.15	novel	2936	13	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	75.4200735878718	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	NA	False	NA	-5	True	AATAAA	-22	NA	218292577	218274196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218285762_218285939_218292465
transcript_114873.known	chr2	-	2292	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	63.5635947576315	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	6	True	NA	-5	True	AATAAA	-22	NA	218292503	218274196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
transcript_114875.known	chr2	-	1251	11	FSM	ENSG00000135926.15	ENST00000445635.5	1251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	65.6950530862104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATAGGCCATTATCCT	-4	True	NA	NA	False	NA	NA	NA	218292513	218275005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218292465
transcript_114876.known	chr2	+	1322	10	FSM	ENSG00000158428.4	ENST00000289388.4	1322	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.415739709641549	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCCGTCGACAGCGTCCC	-12	True	NA	NA	False	AATAAA	-24	NA	218356856	218368094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218356910_218357094_218357188_218357533_218357735_218358036_218358093_218360572_218360660_218362734_218362903_218364627_218364753_218367023_218367101_218367429_218367519_218367721
transcript_114877.known	chr2	+	2991	9	FSM	ENSG00000127838.15	ENST00000258362.7	2991	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	7.68012857965282	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCACCCAACAGCT	9	True	NA	24	True	AATAAA	-28	NA	218323172	218346791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218323432_218339782_218339899_218340028_218340142_218340727_218340787_218341533_218341627_218341980_218342145_218343499_218343587_218344454_218344571_218344807
transcript_114882.nic	chr2	+	3689	8	FSM	ENSG00000127838.15	ENST00000689098.1	3625	8	-57	-7	33	0	multi-exon	FALSE	canonical	3	25	junction_7	7.99489633121898	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCACCCAACAGCT	58	False	NA	24	True	AATAAA	-28	NA	218323221	218346791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218323432_218339782_218339899_218340028_218340142_218340727_218341627_218341980_218342145_218343499_218343587_218344454_218344571_218344807
transcript_114887.known	chr2	+	758	3	FSM	ENSG00000127838.15	ENST00000248451.7	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_1	121	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	3942	False	NA	22	True	AATAAA	-27	NA	218270391	218272947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218270603_218271380_218271550_218272569
transcript_11489.known	chr1	+	3284	8	FSM	ENSG00000121957.15	ENST00000675829.1	3284	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	13.9122615130741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATAAAATATTCTAAGAA	671	False	NA	NA	False	AATAAA	-19	NA	108876959	108903759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789
transcript_114890.nnic	chr2	+	588	3	NNC	ENSG00000127838.15	novel	758	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	605	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	-5	True	NA	22	True	AATAAA	-27	NA	218270518	218272947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_218270603_218271423_218271550_218272569
transcript_114891.known	chr2	-	2422	12	FSM	ENSG00000135926.15	ENST00000396809.6	2422	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_11	58.4341120797215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTGTATGGCTCCAG	6608	False	NA	-9	True	AATAAA	-18	NA	218285934	218274200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218285762
transcript_114892.known	chr2	+	786	7	FSM	ENSG00000144579.8	ENST00000491064.5	786	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	15.4668103441602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAGTGAGGGTGATGGG	21	False	NA	NA	False	NA	NA	NA	218398255	218404418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218398333_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_114894.known	chr2	+	1118	7	FSM	ENSG00000144579.8	ENST00000488627.5	1118	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9791530856092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGTTCCTGCCTTGGAC	981	False	NA	NA	False	NA	NA	NA	218401061	218404773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218401116_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_114896.known	chr2	+	2525	7	FSM	ENSG00000144579.8	ENST00000273062.7	2525	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	14.5028732785381	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	-6	True	NA	29	True	ACTAAA	-19	NA	218399867	218405941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218400158_218401563_218401713_218402110_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_114898.known	chr2	-	8022	26	FSM	ENSG00000135913.11	ENST00000258399.8	8022	26	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_14	13.1054797699283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGACTGTTATTTC	-16	True	NA	-4	True	ATTAAA	-17	NA	218568351	218450250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_114899.known	chr2	-	3353	26	FSM	ENSG00000135913.11	ENST00000418019.5	3353	26	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_24	16.2406896405294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGGCCAAACCAAAAGA	1719	False	NA	NA	False	NA	NA	NA	218568291	218454814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562717_218562814_218568177
transcript_114900.known	chr2	-	5019	26	FSM	ENSG00000135913.11	ENST00000454775.5	5019	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_23	15.2656477098091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAAAC	10	True	NA	NA	False	ATTAAA	-8	NA	218568325	218453267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558718_218560819_218560884_218562672_218562814_218568177
transcript_114905.nnic	chr2	-	1793	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-33	2038	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	16.0252925090308	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATTCAACCCAGCAAT	1626	False	NA	NA	False	AATAAA	-5	NA	218568384	218526232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_114913.known	chr2	+	6500	20	FSM	ENSG00000127831.11	ENST00000248444.10	6500	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	10.1528484874922	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTCAGACTGCAGT	1	True	NA	NA	False	NA	NA	NA	218419122	218453295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724_218430879_218431856_218431958_218432045_218432184_218432792_218432952_218434525_218434706_218435288_218435435_218436481_218436627_218437123_218437313_218438657_218438727_218440721_218440863_218449222
transcript_11492.known	chr1	-	4240	15	FSM	ENSG00000085433.17	ENST00000369965.8	4240	15	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_10	7.14607070568241	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTGTTCCTCAGTCT	4	True	NA	-3	True	AATAAA	-20	NA	109042113	108970213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108971573_108974535_108974755_108981732_108981865_108982608_108982780_108983281_108983452_108986522_108986681_108991253_108991330_108995579_108995838_109002223_109002403_109004591_109004719_109010915_109011719_109013840_109013926_109017517_109017602_109023354_109023522_109041861
transcript_114926.known	chr2	+	1621	9	FSM	ENSG00000144580.14	ENST00000627282.2	1621	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	172.757009626238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGTGTCAACACCAGCA	-41	True	NA	NA	False	NA	NA	NA	218568579	218594526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587304_218587401_218587585_218587696_218592303_218592403_218592615_218592708_218594107
transcript_114927.known	chr2	+	1126	8	FSM	ENSG00000144580.14	ENST00000295701.9	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	113.677129608019	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAACTATTGAACC	-1	True	NA	3	True	AATAAA	-18	NA	218568874	218593842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218593527
transcript_114928.known	chr2	+	3820	8	FSM	ENSG00000144580.14	ENST00000273064.11	3820	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	38.1142214606441	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATAGGAAACCTTAG	9	True	NA	NA	False	NA	NA	NA	218568838	218597080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107
transcript_11493.known	chr1	+	555	1	FSM	ENSG00000244716.3	ENST00000414070.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	9561	False	NA	NA	False	AAGAAA	-34	NA	108992281	108992836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108992300_108992800
transcript_114938.known	chr2	+	1525	9	FSM	ENSG00000074582.15	ENST00000392110.6	1525	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	63.4187472282447	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	5	True	NA	14	True	AATAAA	-14	NA	218659713	218663442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659744_218660036_218660167_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_114940.known	chr2	+	1636	9	FSM	ENSG00000074582.15	ENST00000392111.7	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	64.4882498987219	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	-26	True	NA	15	True	AATAAA	-15	NA	218659682	218663443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659744_218660036_218660246_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_114944.known	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	60.3629646389241	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	5	False	NA	-24	True	NA	NA	NA	218659759	218663404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_114953.known	chr2	+	1427	8	FSM	ENSG00000074582.15	ENST00000359273.8	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	50.2986996220923	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	-26	True	NA	15	True	AATAAA	-15	NA	218659682	218663443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659744_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_11496.known	chr1	+	2769	3	FSM	ENSG00000215717.7	ENST00000338272.9	2769	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	15.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCAATTTATTTGT	0	True	NA	16	True	AATAAA	-17	NA	109090763	109096934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109090883_109092889_109093022_109094416
transcript_114965.known	chr2	+	2015	8	FSM	ENSG00000074582.15	ENST00000431802.5	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	48.1778168955	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	17	False	NA	14	True	AATAAA	-14	NA	218659771	218663442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_114966.known	chr2	+	1430	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.7680089421719	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	28	True	NA	15	True	AATAAA	-15	NA	218659736	218663443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_114975.known	chr2	-	1477	10	FSM	ENSG00000163481.8	ENST00000295704.7	1477	10	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	24.7835070605881	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-13	True	NA	-35	True	AATAAA	-15	NA	218672002	218663891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
transcript_114982.known	chr2	+	4873	27	FSM	ENSG00000163482.12	ENST00000295709.8	4873	27	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	22.5049961579869	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGTCTGGCAGCTTA	26	True	NA	10	True	NA	NA	NA	218672085	218702715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_114983.known	chr2	+	4821	27	FSM	ENSG00000163482.12	ENST00000392105.7	4821	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_21	25.0481488999409	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATCCTGGTCTGGC	9	True	NA	4	True	NA	NA	NA	218672068	218702709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696589_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_114989.known	chr2	+	4721	27	FSM	ENSG00000163482.12	ENST00000440309.5	4721	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	24.2130887876589	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGAAGCTCCCAGGAC	-21	True	NA	21	True	AATAAA	-15	NA	218672295	218702623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218672366_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_114991.nic	chr2	+	4750	27	NIC	ENSG00000163482.12	novel	4721	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	26.5394927335888	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGTCTGGCAGCTTA	-21	True	NA	10	True	NA	NA	NA	218672295	218702715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_218672366_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696589_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_115.known	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4003_+_0_4000
transcript_11501.known	chr1	+	1882	12	FSM	ENSG00000031698.13	ENST00000369923.4	1882	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	387.996677160518	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTTGAACCCCGCCTCT	44	False	NA	-25	True	AATAAA	-45	NA	109213981	109238148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109236804_109236871_109237243_109237374_109237730
transcript_115015.known	chr2	+	5007	20	FSM	ENSG00000135912.11	ENST00000392102.6	5007	20	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_8	26.9057038099159	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGACTGAGTGAACTGTA	-25	True	NA	7	True	AATAAA	-1	NA	218710834	218755416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218711038_218727268_218727348_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754133
transcript_115016.nic	chr2	+	4235	20	NIC	ENSG00000135912.11	novel	5007	20	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_19	57.9581470925739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCATGTGTGGTTTGT	46	False	NA	24	True	TATAAA	-24	NA	218710786	218754693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_218711038_218727268_218727348_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754230
transcript_115021.nic	chr2	+	4205	19	NIC	ENSG00000135912.11	novel	5007	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	55.8412929649735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCATGTGTGGTTTGT	-25	True	NA	24	True	TATAAA	-24	NA	218710834	218754693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_218711038_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754133
transcript_115028.nic	chr2	+	2130	3	ISM	ENSG00000135912.11	ENST00000442769.5	3971	19	-169	15315	-48	1179	5prime_fragment	FALSE	canonical	3	253	junction_2	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTCCATTCATTTGCA	46	False	NA	NA	False	AATAAA	-17	NA	218710786	218739378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_218711038_218727268_218727348_218737578
transcript_115033.known	chr2	+	1895	9	FSM	ENSG00000135929.9	ENST00000258415.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	14.1774468787578	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTGTCATTCTTTTTG	-1	True	NA	18	True	AATAAA	-23	NA	218782146	218815293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218782438_218809576_218809768_218812221_218812422_218812551_218812750_218812923_218813097_218814020_218814188_218814379_218814459_218814544_218814758_218814910
transcript_115042.known	chr2	+	2566	7	FSM	ENSG00000135929.9	ENST00000494263.5	2566	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	16.1288216832132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGACCTTTGTCATTCT	-9	True	NA	13	True	AATAAA	-18	NA	218781748	218815288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218782438_218809576_218809768_218812221_218812422_218812551_218812750_218812923_218813097_218814020_218814758_218814910
transcript_115049.known	chr2	-	2473	3	FSM	ENSG00000163501.7	ENST00000295731.7	2473	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGAGTCCAGGATGCT	0	True	NA	-3	True	AATAAA	-20	NA	219060921	219054423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219055866_219057432_219057695_219060152
transcript_115052.nic	chr2	-	2000	8	NIC	ENSG00000187736.13	novel	2113	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	44.982082600765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	-5	True	NA	-31	True	AATAAA	-18	NA	219160557	219075328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160509
transcript_115053.known	chr2	-	8020	8	FSM	ENSG00000187736.13	ENST00000356853.10	8020	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_7	14.3270829592925	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTATTTTCATTTGT	-13	True	NA	-3	True	ATTAAA	-18	NA	219160815	219069356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_115057.known	chr2	-	1954	7	FSM	ENSG00000187736.13	ENST00000409720.5	1954	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.9628606688362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAACATTTATTGAGCA	2478	False	NA	-19	True	AATAAA	-30	NA	219158362	219075316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219076446_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185
transcript_115062.known	chr2	+	4556	9	FSM	ENSG00000144567.11	ENST00000430297.7	4556	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.0690262633915	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGATAATTCTAGTG	-3	True	NA	15	True	AATAAA	-20	NA	219178274	219185475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219178634_219178921_219179029_219179732_219179764_219180109_219180246_219180669_219180755_219181061_219181206_219181368_219181464_219181639_219181776_219182012
transcript_115066.known	chr2	+	2533	9	FSM	ENSG00000144567.11	ENST00000273048.2	2533	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	42.3303599677584	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTCCCTGACTGTG	-11	True	NA	14	True	AATAAA	-18	NA	219178226	219183492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219178634_219178921_219179029_219179732_219179764_219180197_219180246_219180669_219180755_219181061_219181206_219181368_219181464_219181639_219181776_219182012
transcript_115072.known	chr2	-	1154	9	FSM	ENSG00000115649.16	ENST00000453038.5	1154	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	116.600546739713	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGTCTTCTGGCCTCA	826	False	NA	NA	False	GGGGCT	-12	NA	219177313	219172893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177103
transcript_115073.known	chr2	-	2073	9	FSM	ENSG00000115649.16	ENST00000409789.5	2073	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	123.434129700825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGACTGATGGGTTCAGG	33	True	NA	NA	False	NA	NA	NA	219178106	219172173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177697
transcript_115079.known	chr2	-	2019	8	FSM	ENSG00000115649.16	ENST00000360507.10	2019	8	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_7	22.8901547324056	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	15	True	NA	-5	True	AATAAA	-15	NA	219176925	219171896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759
transcript_115083.known	chr2	-	919	7	FSM	ENSG00000115649.16	ENST00000451647.1	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_6	24.2807651352991	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGCTGTCCTGCATCCC	42	True	NA	NA	False	AATACA	-8	NA	219176898	219173050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219175109_219175590_219175673_219176222_219176332_219176759
transcript_115088.known	chr2	+	944	10	FSM	ENSG00000158552.13	ENST00000409336.5	944	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	49.0532590377257	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGGAGGTCGCCCTG	17	True	NA	NA	False	NA	NA	NA	219206808	219209418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_115091.known	chr2	+	1322	9	FSM	ENSG00000158552.13	ENST00000289528.10	1322	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	18.8348082018374	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	-10	True	NA	NA	False	AATAAA	-26	NA	219206781	219209648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_115094.known	chr2	+	1765	7	FSM	ENSG00000158552.13	ENST00000409097.5	1765	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	29.227555491351	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCTGGAAAAAATAAAGGA	15	True	NA	NA	False	NA	NA	NA	219206806	219209606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219206846_219206969_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425
transcript_115096.known	chr2	+	886	7	FSM	ENSG00000158552.13	ENST00000409217.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	11.066716867356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTAGGTGGGACCACTC	23	True	NA	NA	False	NA	NA	NA	219206814	219208696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571
transcript_11510.known	chr1	+	1914	11	FSM	ENSG00000031698.13	ENST00000234677.7	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	962	junction_5	63.9021908857591	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACTTCTGCTTTTCCT	-20	True	NA	9	True	NA	NA	NA	109213917	109238182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109237243_109237374_109237730
transcript_115102.known	chr2	-	2980	19	FSM	ENSG00000115657.14	ENST00000265316.9	2980	19	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_17	32.3526097560103	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	-2	True	NA	-8	True	AATAAA	-14	NA	219218958	219209771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219217669_219217808_219218124
transcript_115106.known	chr2	-	2878	18	FSM	ENSG00000115657.14	ENST00000295750.5	2878	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	61.3292774848735	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	219218994	219209771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219218124
transcript_115131.nic	chr2	-	3939	17	NIC	ENSG00000198925.12	novel	4025	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	62	junction_16	127.405219060092	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-34	True	NA	-5	True	AATAAA	-16	NA	219229642	219219381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009_219229175_219229534
transcript_115142.known	chr2	-	4025	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_15	100.684236877257	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-28	True	NA	-5	True	AATAAA	-16	NA	219229368	219219381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
transcript_115143.known	chr2	-	3770	16	FSM	ENSG00000198925.12	ENST00000361242.9	3770	16	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_15	76.6331520948995	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-28	True	NA	-3	True	AATAAA	-18	NA	219229636	219219379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_115150.known	chr2	-	3701	16	FSM	ENSG00000198925.12	ENST00000409033.7	3701	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	126.345557895796	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-18	True	NA	-3	True	AATAAA	-18	NA	219229626	219219379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223927_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_115159.known	chr2	-	3799	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	0	0	0	multi-exon	FALSE	canonical	2	102	junction_14	95.5612048770369	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	9037	False	NA	-3	True	AATAAA	-18	NA	219229717	219219379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
transcript_115195.known	chr2	-	2574	17	FSM	ENSG00000163521.16	ENST00000392089.6	2574	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	4.11884009764885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTAACCCTTG	9258	False	NA	NA	False	NA	NA	NA	219245478	219236770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243632_219245228
transcript_115198.nic	chr2	+	2454	14	NIC	ENSG00000163516.14	novel	2540	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_2	86.6815569062549	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	-26	True	NA	38	True	AATAAA	-14	NA	219229808	219236651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_115199.known	chr2	+	2540	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_5	65.1009230158436	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTAGTTCCTTA	-29	True	NA	66	True	AATAAA	-42	NA	219229805	219236679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_115202.known	chr2	+	2486	14	FSM	ENSG00000163516.14	ENST00000410034.7	2486	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.3522346154202	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACTTGTACTTACA	53	False	NA	36	True	AATAAA	-12	NA	219229887	219236649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229959_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_115205.known	chr2	+	2940	13	FSM	ENSG00000163516.14	ENST00000477479.5	2940	13	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	88.5219683970532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAATCACAATAAA	-8	True	NA	5	True	NA	NA	NA	219229826	219236618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_115216.known	chr2	+	2155	11	FSM	ENSG00000163516.14	ENST00000409849.5	2155	11	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_1	101.402416144784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGGCACTGTGGCCTT	446	False	NA	56	True	AATAAA	-32	NA	219229786	219236669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229901_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_115219.known	chr2	+	2868	8	FSM	ENSG00000115661.14	ENST00000409638.7	2868	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.73946317089104	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	NA	False	NA	3	True	AATAAA	-15	NA	219245454	219250337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219245523_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_115225.known	chr2	+	3118	8	FSM	ENSG00000115661.14	ENST00000396738.7	3118	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.49328441476351	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	-24	True	NA	3	True	AATAAA	-15	NA	219245478	219250337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219245797_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_115235.known	chr2	+	2094	6	FSM	ENSG00000115661.14	ENST00000496443.5	2094	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	16.8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTAGTCTCAGTGTTC	4	True	NA	18	True	AATAAA	-19	NA	219245506	219248904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219245797_219245895_219246877_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_115238.known	chr2	-	673	4	FSM	ENSG00000127824.15	ENST00000456818.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	96.9409900689876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTACAGCCGTGGTC	1591	False	NA	NA	False	AAGAAA	-35	NA	219253145	219251172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219252995
transcript_115239.known	chr2	-	648	4	FSM	ENSG00000127824.15	ENST00000447205.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	93.6601421215141	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	1382	False	NA	NA	False	AAGAAA	-14	NA	219253354	219251193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253208
transcript_115241.known	chr2	-	2049	4	FSM	ENSG00000127824.15	ENST00000248437.9	2049	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	22.0655588845805	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTGATTTCTTTC	-1	True	NA	-2	True	ATTAAA	-17	NA	219253918	219249709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253855
transcript_115242.known	chr2	-	2499	4	FSM	ENSG00000127824.15	ENST00000392088.6	2499	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	102.568134536133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTGTGATTTCTTT	128	False	NA	-3	True	ATTAAA	-16	NA	219254608	219249710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219254094
transcript_115244.known	chr2	-	804	3	FSM	ENSG00000127824.15	ENST00000462806.5	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	27	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	1	True	NA	NA	False	AAGAAA	-14	NA	219253916	219251193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251714_219252007_219252231_219253855
transcript_115246.known	chr2	+	579	2	FSM	ENSG00000115661.14	ENST00000491697.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGTCAAGTGCAGAG	-30	True	NA	62	True	NA	NA	NA	219245472	219246424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219245523_219245895
transcript_115247.known	chr2	+	1946	10	FSM	ENSG00000135924.17	ENST00000392086.8	1946	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	4.90149888891395	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	-25	True	NA	17	True	AATAAA	-18	NA	219279343	219286898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_115251.known	chr2	+	3072	9	FSM	ENSG00000135924.17	ENST00000336576.10	3072	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	5.17052946998661	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGGTGTGTTGTGTT	-3	True	NA	14	True	AATAAA	-15	NA	219279365	219286895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631
transcript_115254.known	chr2	-	3612	23	FSM	ENSG00000054356.14	ENST00000295718.7	3612	23	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_13	6.51254352311721	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	-13	True	NA	0	True	AATAAA	-28	NA	219309401	219289622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219297884_219298104_219299046_219299112_219299304_219299385_219299699_219299787_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
transcript_115256.known	chr2	-	3622	22	FSM	ENSG00000054356.14	ENST00000409251.7	3622	22	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	6.37633094905543	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	NA	False	NA	0	True	AATAAA	-28	NA	219309498	219289622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219297884_219298104_219299046_219299112_219299304_219299385_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
transcript_115258.nnic	chr2	-	3501	22	NIC	ENSG00000054356.14	novel	3612	23	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_10	7.51053681605424	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	NA	False	NA	0	True	AATAAA	-28	NA	219309509	219289622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219299046_219299112_219299304_219299385_219299699_219299787_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
transcript_115260.nnic	chr2	-	3308	21	NIC	ENSG00000054356.14	novel	3622	22	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	7.46592258197204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	-15	True	NA	0	True	AATAAA	-28	NA	219309403	219289622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219299046_219299112_219299304_219299385_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
transcript_115267.known	chr2	-	1657	15	FSM	ENSG00000123992.20	ENST00000373963.5	1657	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	156.242697788552	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-17	True	NA	-5	True	ATTAAA	-16	NA	219387929	219374195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387758
transcript_115269.known	chr2	-	1875	15	FSM	ENSG00000123992.20	ENST00000373966.5	1875	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	170.694320410517	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-20	True	NA	-5	True	ATTAAA	-16	NA	219387932	219374195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
transcript_115270.known	chr2	-	3825	15	FSM	ENSG00000123992.20	ENST00000273075.9	3825	15	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_9	43.2989725098433	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATCATTGTACATTTG	0	True	NA	-13	True	GATAAA	-5	NA	219387912	219372042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_115295.known	chr2	-	1610	8	FSM	ENSG00000123992.20	ENST00000460963.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_2	46.517935974707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAACAAAA	1	True	NA	NA	False	NA	NA	NA	219387792	219384585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_115307.known	chr2	-	565	5	FSM	ENSG00000123992.20	ENST00000523527.5	565	5	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_3	45.3376223461266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCAGTCTGGTCAGAG	-1	True	NA	NA	False	NA	NA	NA	219387818	219386203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_115316.known	chr2	+	2243	9	FSM	ENSG00000175084.13	ENST00000373960.4	2243	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.75850956133924	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	-1	True	NA	3	True	AATAAA	-16	NA	219418376	219426734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219419041_219420094_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
transcript_115319.known	chr2	+	1631	8	FSM	ENSG00000175084.13	ENST00000477226.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.84999104903714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	9	False	NA	3	True	AATAAA	-16	NA	219420042	219426734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
transcript_115325.known	chr2	+	1501	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	66.6583328124349	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	17	True	NA	16	True	AATAAA	-16	NA	219498905	219506988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115327.known	chr2	+	1522	13	FSM	ENSG00000144591.20	ENST00000313597.10	1522	13	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	51.0170859179114	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	2	True	NA	17	True	AATAAA	-17	NA	219498890	219506989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115329.known	chr2	+	1725	13	FSM	ENSG00000144591.20	ENST00000683691.1	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.078764659794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	110	False	NA	-8	True	NA	NA	NA	219498998	219506964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219499255_219499960_219500021_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115330.known	chr2	+	1797	13	FSM	ENSG00000144591.20	ENST00000622191.2	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	80.3817281614561	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	18	True	NA	-8	True	NA	NA	NA	219498906	219506964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115332.known	chr2	+	1537	13	FSM	ENSG00000144591.20	ENST00000683386.1	1537	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	109.780431113908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	217	False	NA	-8	True	NA	NA	NA	219499105	219506964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501911_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115333.known	chr2	+	1335	13	FSM	ENSG00000144591.20	ENST00000341142.8	1335	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	85.1819947067584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGCTGCCAGAAGGCCC	26	True	NA	NA	False	NA	NA	NA	219498914	219506798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498972_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115336.nic	chr2	+	3284	12	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	26.4293850986779	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	86	False	NA	10	True	AATAAA	-15	NA	219441992	219466860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219442084_219443107_219443151_219444029_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_115345.known	chr2	+	1630	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	53.2821896653768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	-1	True	NA	-37	True	NA	NA	NA	219498887	219506935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115347.known	chr2	+	1814	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	93.2026140874132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-24	True	NA	-8	True	NA	NA	NA	219498864	219506964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115348.known	chr2	+	1799	12	FSM	ENSG00000144591.20	ENST00000684274.1	1799	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.9407536219162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-24	True	NA	-8	True	NA	NA	NA	219498864	219506964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504219_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_115354.nnic	chr2	+	3050	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	29.857159945313	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	-1	True	NA	10	True	AATAAA	-15	NA	219442043	219466860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219442084_219443107_219443151_219444029_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_115356.nic	chr2	+	3254	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	30.0506239535887	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	86	False	NA	10	True	AATAAA	-15	NA	219441992	219466860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219442084_219443107_219443151_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_115358.nic	chr2	+	4111	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	25.1994047548747	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	0	True	NA	10	True	AATAAA	-15	NA	219442044	219466860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219442084_219443107_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_11536.known	chr1	+	804	2	FSM	ENSG00000031698.13	ENST00000482384.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCTGATTCTATGT	-6	True	NA	NA	False	NA	NA	NA	109213931	109215153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109214129_109214546
transcript_115375.known	chr2	+	1457	5	FSM	ENSG00000072195.15	ENST00000396688.5	1457	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	35.7980446393375	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCCAGTTTGTACCT	31	False	NA	-9	True	NA	NA	NA	219460765	219466841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219460997_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_11538.known	chr1	-	1584	8	FSM	ENSG00000134222.16	ENST00000369904.7	1584	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	153.593951836706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-5	True	NA	-11	True	AATAAA	-27	NA	109283115	109279555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_115385.known	chr2	+	2213	5	FSM	ENSG00000188760.11	ENST00000373883.4	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	6.60965203320114	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTTTGGTGGCTGG	-7	True	NA	34	True	TATAAA	-31	NA	219544027	219550595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219544378_219544688_219544894_219547505_219548082_219549151_219549355_219549716
transcript_115387.nic	chr2	+	3049	5	NIC	ENSG00000188760.11	novel	2393	6	NA	NA	-522	0	intron_retention	FALSE	canonical	1	6	junction_1	28.0757902827329	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCTGCCAGGAATGGT	NA	False	NA	18	True	TATAAA	-15	NA	219543140	219550579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219544378_219544723_219544894_219547505_219548082_219549151_219549355_219549716
transcript_11539.nic	chr1	-	1658	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	147.731140237657	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	NA	False	NA	-22	True	AATAAA	-16	NA	109283195	109279566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_115398.known	chr2	-	2634	4	FSM	ENSG00000123989.15	ENST00000535926.3	2210	4	0	-424	0	6	multi-exon	FALSE	canonical	0	0	junction_3	281.731550712139	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAGGTTTTGAAAAGG	9654	False	NA	-6	True	AATAAA	-22	NA	219543097	219538947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219540643_219540945_219541126_219541615_219542190_219542912
transcript_115399.known	chr2	-	3028	4	FSM	ENSG00000123989.15	ENST00000243776.11	3028	4	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_2	14.8548533034381	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTCAGAGGTTTTG	8942	False	219543847	-12	True	AATAAA	-16	NA	219543809	219538953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219540643_219540945_219541126_219541615_219542190_219543224
transcript_115409.known	chr2	-	1079	2	FSM	ENSG00000123989.15	ENST00000373891.3	1044	2	-35	0	22	0	multi-exon	FALSE	canonical	3	612	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTATCTTCCTTTGTG	5	True	NA	-11	True	AGTAAA	-18	NA	219543573	219541459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219542190_219543224
transcript_115416.known	chr2	-	5520	14	FSM	ENSG00000124006.15	ENST00000603926.5	5520	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	111.790008127559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCCAATGTTATTC	783	False	NA	-17	True	AATAAA	-1	NA	219571289	219555165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219556293_219556453_219556724_219557342_219557619_219557822_219558111_219558183_219558460_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_11543.nic	chr1	-	1711	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	150.711374379464	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	NA	False	NA	-22	True	AATAAA	-16	NA	109283195	109279566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_115445.nnic	chr2	-	3046	10	NNC	ENSG00000124006.15	novel	3297	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	101.884950850832	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	-13	True	NA	-17	True	AATAAA	-17	NA	219571556	219561721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220_219570897_219571414
transcript_115446.nnic	chr2	-	3255	10	NNC	ENSG00000124006.15	novel	3297	9	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	101.884950850832	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	-12	True	NA	-17	True	AATAAA	-17	NA	219571555	219561721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220_219571149_219571456
transcript_115451.known	chr2	-	3297	9	FSM	ENSG00000124006.15	ENST00000373873.8	3297	9	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	44.0794736810684	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	783	False	NA	-17	True	AATAAA	-17	NA	219571289	219561721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_115452.known	chr2	-	2274	9	FSM	ENSG00000124006.15	ENST00000289656.3	2274	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	106.439830420759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAATAAACATGCAAATAA	-18	True	NA	-42	True	NA	NA	NA	219571464	219561746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219571393
transcript_115463.known	chr2	-	662	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	5	True	NA	-4	True	AATAAA	-14	NA	219552389	219550728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219550843_219551528_219551799_219552111
transcript_115465.known	chr2	-	6105	21	FSM	ENSG00000124006.15	ENST00000404537.6	6105	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	124.268700805955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	4	True	NA	-3	True	AATAAA	-15	NA	219571539	219550727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535_219552698_219552867_219553025_219553573_219553687_219554473_219554741_219556019_219556293_219556453_219556724_219557342_219557619_219557822_219558111_219558183_219558460_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_115466.known	chr2	-	694	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	38.6637929966641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-4	True	NA	-4	True	AATAAA	-14	NA	219552714	219550728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
transcript_115470.known	chr2	+	3618	25	FSM	ENSG00000144589.22	ENST00000456909.6	3618	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	16.3271672034339	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	-4	True	NA	22	True	AATAAA	-18	NA	219597856	219616451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615093_219615342_219616043
transcript_115472.nnic	chr2	+	3596	25	NNC	ENSG00000144589.22	novel	3618	25	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	20.8166599946613	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	NA	False	NA	22	True	AATAAA	-18	NA	219597821	219616451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615150_219615342_219616043
transcript_11549.known	chr1	-	1730	8	FSM	ENSG00000134222.16	ENST00000409267.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	150.778659238079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	29	False	NA	-11	True	AATAAA	-27	NA	109283125	109279555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283027
transcript_11550.known	chr1	-	1717	8	FSM	ENSG00000134222.16	ENST00000369907.7	1717	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	118.627181384644	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	7	True	NA	-11	True	AATAAA	-27	NA	109283147	109279555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_11551.nnic	chr1	-	1755	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_7	143.64184484974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-2	True	NA	-22	True	AATAAA	-16	NA	109283156	109279566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283027
transcript_115517.known	chr2	+	4151	23	FSM	ENSG00000114923.17	ENST00000358055.8	4151	23	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_3	13.2593332168466	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCACTTTCTTGGTT	-5	True	NA	24	True	NA	NA	NA	219627629	219641971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219627746_219627899_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630152_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
transcript_11552.known	chr1	-	1742	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	109.900882988412	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-14	True	NA	-12	True	AATAAA	-26	NA	109283168	109279556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_115521.known	chr2	+	4246	23	FSM	ENSG00000114923.17	ENST00000273063.10	4246	23	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_5	15.9594657007854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTGGTTTCATCTTTG	48	False	NA	33	True	NA	NA	NA	219627564	219641980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219627746_219627959_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630071_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
transcript_115522.known	chr2	+	4069	23	FSM	ENSG00000114923.17	ENST00000317151.7	4069	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	13.2593332168466	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTGGTTTCATCTTTG	0	True	NA	33	True	NA	NA	NA	219627660	219641980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219627746_219627959_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630152_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
transcript_115539.known	chr2	-	6362	18	FSM	ENSG00000116106.12	ENST00000281821.7	6362	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	3.86448651897808	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTGTCTCTTTCAATA	-15	True	NA	2	True	AATAAA	-26	NA	221572304	221418026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_221420553_221425208_221426143_221426463_221426620_221429957_221430152_221434141_221434292_221436398_221436609_221437060_221437123_221442828_221443015_221443492_221443607_221446122_221446182_221455546_221455659_221456612_221456773_221457865_221457991_221482351_221482691_221501016_221501173_221563730_221564395_221568717_221568786_221572157
transcript_11554.known	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	149.280997874916	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-12	True	NA	-40	True	NA	NA	NA	109283122	109279584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
transcript_115542.known	chr2	+	1949	1	FSM	ENSG00000272944.1	ENST00000609776.1	1949	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGGTTCTTTCATGT	NA	False	NA	NA	False	CATAAA	-40	NA	221572505	221574454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_221572500_221574500
transcript_115549.known	chr2	-	6761	17	FSM	ENSG00000116120.11	ENST00000281828.8	6761	17	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_12	89.4733724356023	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTATAGTCTTTTGT	-9	True	NA	NA	False	AATAAA	-19	NA	222656092	222566898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_222572023_222599927_222600084_222613810_222613929_222619644_222619738_222623649_222623731_222624271_222624480_222624713_222624776_222628836_222628889_222630112_222630175_222631603_222631675_222633198_222633308_222634390_222634542_222639579_222639696_222640861_222640932_222642850_222643006_222648739_222648796_222656015
transcript_11555.nnic	chr1	-	1798	8	NNC	ENSG00000134222.16	novel	1742	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	149.879407306988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	9	True	NA	-22	True	AATAAA	-16	NA	109283145	109279566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282826_109283062
transcript_115561.known	chr2	+	5577	17	FSM	ENSG00000123983.15	ENST00000357430.8	5577	17	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	147.547820637921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTAATATATTGGCTTT	9	True	NA	NA	False	AATAAA	-33	NA	222861035	222944639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_115567.known	chr2	+	3147	16	FSM	ENSG00000123983.15	ENST00000392066.7	3147	16	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	44.8027776916665	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGATCTTGTGAATATA	NA	False	NA	-12	True	AATAAA	-26	NA	222860941	222942222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_115570.known	chr2	+	5545	16	FSM	ENSG00000123983.15	ENST00000680525.1	5545	16	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_11	119.628573324083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	1	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927243_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_115571.known	chr2	+	5468	16	FSM	ENSG00000123983.15	ENST00000679545.1	5468	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	125.819376709454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	1	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918069_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_115577.known	chr2	+	5433	15	FSM	ENSG00000123983.15	ENST00000680251.1	5433	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	120.939013134551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	1	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_115584.known	chr2	+	1900	10	FSM	ENSG00000123983.15	ENST00000680382.1	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	41.3091327002207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	1	True	NA	NA	False	NA	NA	NA	222860983	222924829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455
transcript_115585.known	chr2	+	5652	17	FSM	ENSG00000123983.15	ENST00000680475.1	5652	17	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_12	175.124765792135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	1	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927243_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_115587.nic	chr2	+	1454	8	ISM	ENSG00000123983.15	ENST00000535678.2	1762	9	0	554	0	-554	5prime_fragment	FALSE	canonical	3	406	junction_3	45.8938437915063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCAGTGTCTGTGAC	1	True	NA	NA	False	NA	NA	NA	222860983	222922831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707
transcript_115589.known	chr2	+	4538	13	FSM	ENSG00000123983.15	ENST00000681017.1	4538	13	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	38.8197401101839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCAGAGTTCCTCTATCA	1	True	NA	NA	False	AAAAAG	-20	NA	222860983	222934048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165
transcript_115594.known	chr2	-	3986	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.34520787991171	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGTTTTCATGAAT	-1	True	NA	2	True	AATAAA	-27	NA	223837582	223755325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
transcript_115595.known	chr2	-	4607	12	FSM	ENSG00000085449.15	ENST00000233055.9	4607	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	61.2017392936016	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGCCTAATATCAC	-2	True	NA	-12	True	AATAAA	-18	NA	223945335	223875347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_115602.known	chr2	-	864	5	FSM	ENSG00000085449.15	ENST00000483061.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	60.1638388070442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGCAAACCCTTCCTC	-2	True	NA	NA	False	NA	NA	NA	223945335	223900854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_115603.known	chr2	+	1689	4	FSM	ENSG00000135900.4	ENST00000258383.4	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_2	21.5148527508066	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCATTTTAATTTGATA	10	True	NA	23	True	AATAAA	-23	NA	223957462	223967714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_223957652_223959533_223960003_223963755_223963935_223966862
transcript_115605.known	chr2	-	2226	9	FSM	ENSG00000135919.14	ENST00000409304.6	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_3	79.6884558766199	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGAGACTTTTCCTATT	-1	True	NA	-6	True	AATAAA	-34	NA	224039286	223975044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223975905_223977543_223977628_223980310_223980398_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
transcript_115610.known	chr2	-	563	2	FSM	ENSG00000135919.14	ENST00000489065.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCAGAGCAGCCAGAAG	-5	True	NA	NA	False	NA	NA	NA	224039290	224001551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_224001923_224039098
transcript_115615.known	chr2	-	6756	16	FSM	ENSG00000036257.14	ENST00000264414.9	6756	16	0	0	0	0	multi-exon	TRUE	canonical	3	522	junction_15	70.708038204059	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGCAGTTGTGATT	4	True	NA	NA	False	ATTAAA	-17	NA	224585363	224470149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_224474377_224478199_224478346_224481891_224482079_224495831_224495967_224497752_224497850_224500362_224500488_224502964_224503073_224503651_224503823_224505955_224506133_224506857_224507004_224511353_224511583_224513523_224513639_224514611_224514773_224535527_224535642_224557658_224557857_224584943
transcript_115616.known	chr2	-	9771	2	FSM	ENSG00000169047.6	ENST00000305123.6	9771	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTAAGAGCAGTGTATG	-3	True	NA	-8	True	ATTAAA	-19	NA	226799820	226731311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_226736251_226794988
transcript_115620.known	chr2	-	506	2	FSM	ENSG00000169047.6	ENST00000498335.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAGAAAAAGACTCT	5900	False	NA	NA	False	AAAAAG	-9	NA	226795246	226792137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_226792386_226794988
transcript_115621.known	chr2	+	5061	9	FSM	ENSG00000144468.17	ENST00000392062.7	5061	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	51.3681564785033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	-18	True	NA	NA	False	AATAAA	-23	NA	226836053	226999210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_226836088_226838072_226838155_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_115626.known	chr2	+	4883	7	FSM	ENSG00000144468.17	ENST00000341329.7	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	30.7878042232454	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATTTATACTGTCACCA	NA	False	NA	NA	False	AATAAA	-28	NA	226835935	226999215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_226836088_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_11563.known	chr1	-	1826	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	142.21511483977	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	NA	False	NA	-20	True	AATAAA	-18	NA	109283186	109279564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
transcript_115636.known	chr2	-	2199	8	FSM	ENSG00000236432.8	ENST00000658093.1	2199	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	5.16661180572146	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAATTACTCAGTCTC	7268	False	NA	-10	True	AATAAA	-10	NA	227325216	227258484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_227259284_227264668_227265439_227265874_227265936_227268627_227268770_227279482_227279579_227281703_227281790_227305459_227305656_227325167
transcript_115644.known	chr2	+	1247	9	FSM	ENSG00000168958.20	ENST00000409616.5	1247	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	242.419058656699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGAAATATAAAAGATT	-5	True	NA	-3	True	NA	NA	NA	227325261	227357151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_115647.known	chr2	+	1921	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	226.539973018008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-16	True	NA	23	True	AATAAA	-16	NA	227325250	227357833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_115652.known	chr2	+	1760	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	218.840730455102	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	1	True	NA	23	True	AATAAA	-16	NA	227325267	227357833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
transcript_115656.known	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	194.821425297892	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	9	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_115661.known	chr2	+	1085	7	FSM	ENSG00000168958.20	ENST00000354503.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	73.6223471508482	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCACACCCTGAAAATGT	-17	True	NA	61	True	NA	NA	NA	227325249	227357215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_115669.known	chr2	+	3524	6	FSM	ENSG00000168958.20	ENST00000460756.5	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	73.5581402701292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-2	True	NA	23	True	AATAAA	-16	NA	227325264	227357833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_115670.known	chr2	+	1548	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	204.963021055019	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	-8	True	NA	-11	True	TTTAAA	-22	NA	227325258	227357799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_115673.nic	chr2	+	811	6	NIC	ENSG00000168958.20	novel	1716	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	250.712265356125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGTCTCTGCATT	0	True	NA	27	True	TATAAA	-16	NA	227325216	227357181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_227325428_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_115674.known	chr2	+	647	5	FSM	ENSG00000168958.20	ENST00000524634.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	218.222936466358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAAATACTGTCTCAAC	4	True	NA	-23	True	NA	NA	NA	227325270	227357131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_115677.known	chr2	-	5213	6	FSM	ENSG00000135917.16	ENST00000644224.2	5213	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	5.46260011349906	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCCTACTGTGGAGTA	-13	True	NA	-1	True	AATAAA	-24	NA	227718028	227683762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227702168_227702321_227717942
transcript_115679.known	chr2	+	1683	13	FSM	ENSG00000123977.10	ENST00000309931.3	1683	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	2.17306746840088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTACATGTGTATTT	-20	True	NA	5	True	AATAAA	-15	NA	227871630	227924344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227871730_227885350_227885424_227889855_227890001_227891254_227891314_227893794_227893918_227898181_227898282_227903001_227903110_227904928_227905036_227906235_227906339_227907137_227907253_227918779_227918857_227921398_227921562_227923933
transcript_115680.known	chr2	-	2557	3	FSM	ENSG00000153823.19	ENST00000392055.8	2557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTGTCCTTTTTC	-27	True	NA	1	True	AATAAA	-37	NA	229271287	229023972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_229026109_229155817_229155965_229271013
transcript_115682.known	chr2	-	3257	13	FSM	ENSG00000187957.8	ENST00000341772.5	3257	13	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_3	9.3407708461347	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGTCTCTTTTGTTC	-28	True	NA	-3	True	AATAAA	-18	NA	229714555	229357628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_229358652_229366872_229367120_229388264_229388397_229407231_229407346_229418107_229418231_229447315_229447541_229477139_229477254_229512782_229512937_229546946_229547093_229585857_229586025_229588393_229588489_229591579_229591889_229714147
transcript_115690.known	chr2	+	3120	5	FSM	ENSG00000153832.12	ENST00000373652.7	3120	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.2788110275682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATAATAATCTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	229922301	230013109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_229922610_229932770_229932887_229976240_229976350_229996750_229996924_230010695
transcript_115692.known	chr2	+	2813	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.0757203447796	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTGCCTTATTAC	-2	True	NA	NA	False	ATTAAA	-26	NA	229922502	230013119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
transcript_115695.known	chr2	-	4315	5	FSM	ENSG00000163053.11	ENST00000295190.9	4315	5	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	4.9180788932265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCAGTGAGTTTTTGT	-1	True	NA	-10	True	AATAAA	-17	NA	230068924	230034981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230037532_230045744_230046723_230049760_230049905_230059093_230059367_230068554
transcript_115696.known	chr2	-	1836	4	FSM	ENSG00000163053.11	ENST00000457406.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACATTTTCCTTTT	16	True	NA	NA	False	TATAAA	-27	NA	230068907	230045656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230046723_230049760_230049905_230059093_230059367_230068554
transcript_115697.known	chr2	-	6192	19	FSM	ENSG00000135899.19	ENST00000258381.11	6192	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.52323934294959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTAAACTTTGTTCCA	-9	True	NA	NA	False	AATATA	-30	NA	230219984	230165185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230169238_230170620_230170762_230171695_230171768_230172065_230172175_230172843_230172960_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_115698.known	chr2	-	6120	18	FSM	ENSG00000135899.19	ENST00000358662.9	6120	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.2442091971818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTAAACTTTGTTCCA	-9	True	NA	NA	False	AATATA	-30	NA	230219984	230165185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230169238_230170620_230170762_230172065_230172175_230172843_230172960_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_115701.known	chr2	-	1952	15	FSM	ENSG00000135899.19	ENST00000258382.10	1952	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	2.12011743995083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGTCCATGTGTTTTA	-9	True	NA	NA	False	AATAAA	-18	NA	230219984	230176474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230176725_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_115703.known	chr2	+	3829	9	FSM	ENSG00000135932.12	ENST00000258418.10	3829	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	40.2950058940311	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTCTTTATGATGTG	-29	True	NA	17	True	AATAAA	-18	NA	230712841	230821075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230713231_230759958_230760116_230790871_230791037_230793212_230793332_230798728_230798898_230810262_230810323_230814048_230814115_230817753_230817898_230818515
transcript_115709.nic	chr2	+	2000	6	NIC	ENSG00000135916.16	novel	572	4	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_1	1462.05562137697	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	433	False	NA	16	True	AATAAA	-17	NA	230864617	230879248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_230864785_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_115712.nic	chr2	+	1977	6	NIC	ENSG00000135916.16	novel	563	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	1421.18195879345	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	652	False	NA	16	True	AATAAA	-17	NA	230865641	230879248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_230865786_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_115715.known	chr2	+	1889	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	1324.88122109116	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	-4	True	NA	15	True	AATAAA	-16	NA	230864947	230879247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_115717.known	chr2	+	2037	6	FSM	ENSG00000135916.16	ENST00000326427.11	2037	6	0	0	0	0	multi-exon	FALSE	canonical	3	3330	junction_2	181.196688711466	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	-10	True	NA	16	True	AATAAA	-17	NA	230864941	230879248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_115718.known	chr2	+	1888	5	FSM	ENSG00000135916.16	ENST00000326407.10	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	1490.60161931349	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	28	True	NA	16	True	AATAAA	-17	NA	230864979	230879248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230877399_230877551_230878007
transcript_115719.known	chr2	+	3411	26	FSM	ENSG00000173692.14	ENST00000677000.1	3411	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	406.001371426255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	NA	False	NA	12	True	AATAAA	-12	NA	231056848	231172802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231152716_231152812_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_115720.known	chr2	+	3323	25	FSM	ENSG00000173692.14	ENST00000308696.11	3323	25	0	0	0	0	multi-exon	FALSE	canonical	3	1330	junction_11	99.8317247366231	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGAGCCAGAGTCTTG	-26	True	NA	37	True	AATAAA	-37	NA	231056866	231172827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_115721.known	chr2	+	3442	24	FSM	ENSG00000173692.14	ENST00000431051.6	3442	24	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	314.309517179789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAAGGCCAAGGTGG	-26	True	NA	NA	False	NA	NA	NA	231056866	231173116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_115727.nic	chr2	+	2739	22	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-8	1942	7	0	5prime_fragment	FALSE	canonical	3	1330	junction_11	95.9205548069188	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATAAATTGGTGGTCA	NA	False	NA	76	True	AAAAAG	-37	NA	231056855	231165287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199
transcript_115731.nic	chr2	+	2634	21	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-8	3519	7	0	5prime_fragment	FALSE	canonical	3	1330	junction_11	98.2893051150531	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGGAAAAGGTA	NA	False	NA	19	True	NA	NA	NA	231056855	231163710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634
transcript_115733.known	chr2	+	3258	24	FSM	ENSG00000173692.14	ENST00000678460.1	3258	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	312.714096036801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATGAAATGCCTAAATC	NA	False	NA	19	True	AATAAA	-19	NA	231056848	231172809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_115738.known	chr2	+	4140	20	FSM	ENSG00000173692.14	ENST00000676739.1	4140	20	0	0	0	0	multi-exon	FALSE	canonical	3	1330	junction_11	97.811764498133	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAACTCCGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	231056848	231163084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339
transcript_115739.known	chr2	+	3136	23	FSM	ENSG00000173692.14	ENST00000678679.1	3136	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	319.732833332368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	NA	False	NA	12	True	AATAAA	-12	NA	231056848	231172802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_115742.known	chr2	+	7879	25	FSM	ENSG00000135931.19	ENST00000611582.5	7879	25	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_24	90.2368700051887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCC	-28	True	NA	5	True	NA	NA	NA	231198630	231376848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974_231345091_231355797_231355935_231360753_231360884_231369952_231370126_231371512
transcript_115755.known	chr2	+	2148	21	FSM	ENSG00000135931.19	ENST00000682030.1	2148	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	58.8934631347147	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	15	True	NA	-2	True	TTTAAA	-11	NA	231198673	231345181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_115756.known	chr2	+	2397	21	FSM	ENSG00000135931.19	ENST00000684718.1	2397	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	57.802681598694	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCATTTTGAAAAGCA	17	True	NA	-1	True	TTTAAA	-12	NA	231198675	231345182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_115758.nic	chr2	+	2360	20	NIC	ENSG00000135931.19	novel	2397	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	72.9018617076629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	-28	True	NA	16	True	AATAAA	-17	NA	231198630	231345199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_115765.known	chr2	+	1941	12	FSM	ENSG00000135931.19	ENST00000682027.1	1941	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	74.6962997081023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACCCTGAAGATT	-28	True	NA	NA	False	NA	NA	NA	231198630	231260004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_115770.known	chr2	+	3539	2	FSM	ENSG00000156966.7	ENST00000287590.6	3539	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	-5	True	NA	17	True	AATAAA	-19	NA	231395709	231401164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231395815_231397730
transcript_115771.known	chr2	-	2205	15	FSM	ENSG00000115053.17	ENST00000356936.6	2205	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	1687.71230259382	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	136	False	NA	NA	False	NA	NA	NA	231464353	231455190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457285_231457358_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_115790.known	chr2	-	2978	14	FSM	ENSG00000115053.17	ENST00000453992.6	2978	14	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_13	1348.40720852419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	3	True	NA	-77	True	AAGAAA	-16	NA	231464180	231454807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231463700
transcript_115791.known	chr2	-	2155	14	FSM	ENSG00000115053.17	ENST00000454824.6	2155	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_13	1358.41601544075	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	-16	True	NA	NA	False	NA	NA	NA	231464199	231455190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464159
transcript_115792.known	chr2	-	2653	14	FSM	ENSG00000115053.17	ENST00000679348.1	2653	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1360.91975947003	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-5	True	NA	-77	True	AAGAAA	-16	NA	231464494	231454807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463313_231464335
transcript_115799.known	chr2	-	2674	14	FSM	ENSG00000115053.17	ENST00000678246.1	2674	14	0	0	0	0	multi-exon	TRUE	canonical	1	39	junction_1	1339.46835253978	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTGTTACTTCCTAAA	NA	False	NA	-21	True	ATTAAA	-16	NA	231464518	231454751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455262_231455457_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_115803.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678828.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	1	44	junction_7	1348.20350771864	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTTACTTCCTAAAGAG	0	True	NA	-18	True	ATTAAA	-19	NA	231464489	231454748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458345_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_115813.known	chr2	-	2223	14	FSM	ENSG00000115053.17	ENST00000436894.2	2223	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1360.91975947003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	796	False	NA	NA	False	NA	NA	NA	231463693	231455190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231463585
transcript_11583.known	chr1	-	6990	20	FSM	ENSG00000134243.12	ENST00000256637.8	6990	20	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_13	66.7819040959558	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTGAAATGACTAAGCT	-11	True	NA	-12	True	AATAAA	-24	NA	109397918	109309574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_11584.nic	chr1	-	3362	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	-50	551	combination_of_known_junctions	FALSE	canonical	3	178	junction_13	82.1258408761346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTTTTCAAGCTGTGC	NA	False	NA	-10	True	ATTAAA	-20	NA	109397968	109313249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_11586.nic	chr1	-	2809	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	-50	-2	combination_of_known_junctions	FALSE	canonical	3	178	junction_13	82.1258408761346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTCGTCCTGTCTCTT	NA	False	NA	-2	True	AAAAAG	-28	NA	109397968	109313802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_115878.nic	chr2	-	896	4	ISM	ENSG00000115053.17	ENST00000677786.1	4129	9	10	5496	10	2220	5prime_fragment	FALSE	canonical	3	4311	junction_2	142.703266333403	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGAAGAGGATGATGA	NA	False	NA	-7	True	NA	NA	NA	231464541	231460771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_231460867_231461539_231462018_231463199_231463317_231464335
transcript_11588.nic	chr1	-	2670	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	-50	-141	combination_of_known_junctions	FALSE	canonical	3	178	junction_13	82.1258408761346	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTCTGTTTCTGCTGC	NA	False	NA	-6	True	AATAAA	-18	NA	109397968	109313941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_115880.nic	chr2	-	839	4	ISM	ENSG00000115053.17	ENST00000677786.1	4129	9	10	5553	10	2163	5prime_fragment	FALSE	canonical	3	4311	junction_2	142.703266333403	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAGCTGCAAAAGT	NA	False	NA	-64	True	NA	NA	NA	231464541	231460828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_231460867_231461539_231462018_231463199_231463317_231464335
transcript_115885.known	chr2	-	369	2	FSM	ENSG00000115053.17	ENST00000484328.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	4521	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACATGTTCCTCTGCA	110	False	NA	NA	False	NA	NA	NA	231464379	231462991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231463317_231464335
transcript_115886.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678405.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1359.31239143723	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	NA	False	NA	73	True	NA	NA	NA	231464551	231454878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456160_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_115888.known	chr2	-	3221	3	FSM	ENSG00000171596.7	ENST00000305141.5	3221	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAACAGTGGCATGTTT	-6	True	NA	NA	False	ATTAAA	-24	NA	231530445	231523186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231525426_231528122_231529018_231530358
transcript_115889.known	chr2	+	784	5	FSM	ENSG00000187514.17	ENST00000466801.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	10963.6372243658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCCAAACCATGAGAAT	234	False	NA	154	True	NA	NA	NA	231706894	231713013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231707229_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_115898.known	chr2	+	933	5	FSM	ENSG00000187514.17	ENST00000409683.5	933	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	11274.1512624011	4124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAATGACAACAGAAA	10	True	NA	NA	False	NA	NA	NA	231708535	231713289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712451_231712517_231712803
transcript_115908.known	chr2	+	621	4	FSM	ENSG00000187514.17	ENST00000468027.5	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	22780	junction_2	1903.64078077305	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCAGAGGCCTTGGGC	4	True	NA	NA	False	NA	NA	NA	231708529	231712675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712442
transcript_115917.known	chr2	+	1635	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	0	0	0	0	multi-exon	FALSE	canonical	3	26303	junction_2	408.280132588725	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	4	True	NA	-31	True	NA	NA	NA	231708529	231713506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
transcript_11594.known	chr1	-	3815	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	0	0	0	multi-exon	FALSE	canonical	3	1864	junction_8	187.902193640734	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTAATGACTTGCA	-16	True	NA	-9	True	ATTAAA	-17	NA	109426448	109399041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
transcript_115945.known	chr2	+	2563	8	FSM	ENSG00000144524.18	ENST00000373608.7	2563	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	401.538724083712	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	1	True	NA	10	True	AATAAA	-22	NA	231786447	231809253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801154_231801208_231807486
transcript_115947.known	chr2	+	1103	7	FSM	ENSG00000144524.18	ENST00000410024.5	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	319.751292239592	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCAGTGAGTTCCAGA	-21	True	NA	NA	False	NA	NA	NA	231781670	231807724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231781884_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_11595.nnic	chr1	-	1114	9	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	710.238296278087	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGACTGTTCTC	NA	False	NA	-13	True	AATAAA	-16	NA	109426673	109401849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426419
transcript_115952.known	chr2	+	2513	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_3	81.7638877092652	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	-2	True	NA	10	True	AATAAA	-22	NA	231786444	231809253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_115960.known	chr2	+	1935	6	FSM	ENSG00000144524.18	ENST00000412922.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_3	343.895914485764	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCTGGTTGGAGGGT	-2	True	NA	51	True	NA	NA	NA	231786444	231808764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231796105_231796309_231798858_231798965_231807486
transcript_115962.known	chr2	+	2442	6	FSM	ENSG00000144524.18	ENST00000413197.5	2442	6	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_2	351.730237540078	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCATATCCTCATTGGAA	-13	True	NA	4	True	AATAAA	-16	NA	231786433	231809247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_115975.known	chr2	-	996	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGGAATTCCAGCCC	1	True	NA	NA	False	NA	NA	NA	231781282	231778722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231779501_231781064
transcript_115976.known	chr2	-	1140	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	12.3970762682174	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCACTGCTTTTATCT	1	True	NA	-8	True	ATTAAA	-32	NA	231781282	231732432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
transcript_115977.known	chr2	-	1055	3	FSM	ENSG00000163273.4	ENST00000409852.2	1055	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTATTTACTTGTTG	-1	True	NA	NA	False	AAAAAG	-24	NA	231926396	231921808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231922316_231925404_231925716_231926159
transcript_115985.known	chr2	+	3366	21	FSM	ENSG00000144535.20	ENST00000325385.12	3366	21	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_20	6.87459089691888	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCGCCCCCATCA	-8	True	NA	18	True	ATTAAA	-19	NA	231961712	232337192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336468
transcript_115996.known	chr2	+	2048	7	FSM	ENSG00000144535.20	ENST00000409401.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTGACCTGTGCA	163	False	NA	NA	False	AATGAA	-35	NA	231961683	232131890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618
transcript_115998.known	chr2	+	2492	11	FSM	ENSG00000163286.9	ENST00000295453.8	2492	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	1.56524758424985	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTACTACTTCCTAGC	1	True	NA	10	True	AATAAA	-22	NA	232406843	232410714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232406962_232407056_232407174_232407285_232407402_232407593_232407769_232407844_232408018_232408266_232408402_232408500_232408574_232408703_232408839_232408920_232409113_232409331_232409449_232409573
transcript_116022.nnic	chr2	-	2583	4	Fusion	ENSG00000237087.1_ENSG00000204121.2	novel	576	2	NA	NA	119	-702	intron_retention	FALSE	canonical	3	62	junction_3	19.8158185969358	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACTTCGTGGAGTTGAG	-1	True	NA	-5	True	AATAAA	-10	NA	232421342	232416519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_-_232418128_232418398_232418468_232419291_232419920_232421064
transcript_116029.nnic	chr2	-	3786	3	Fusion	ENSG00000237087.1_ENSG00000204121.2	novel	576	2	NA	NA	61	-702	intron_retention	FALSE	canonical	3	64	junction_1	20.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACTTCGTGGAGTTGAG	NA	False	NA	-5	True	AATAAA	-10	NA	232421400	232416519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_-_232418128_232418398_232418468_232419291
transcript_116030.nnic	chr2	-	4118	2	Fusion	ENSG00000237087.1_ENSG00000204121.2	novel	576	2	NA	NA	5	-697	intron_retention	FALSE	canonical	3	105	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTGGAGTTGAGCAGGC	NA	False	NA	0	True	AATAAA	-15	NA	232421456	232416514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_-_232418468_232419291
transcript_116034.known	chr2	-	2871	18	FSM	ENSG00000171551.12	ENST00000304546.6	2871	18	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_17	13.6376742580819	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-4	True	NA	-1	True	AATAAA	-14	NA	232487834	232479826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486755_232487718
transcript_116035.nnic	chr2	-	3026	18	NNC	ENSG00000171551.12	novel	2871	18	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	23.2594810820795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	NA	False	NA	-1	True	AATAAA	-14	NA	232487875	232479826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486869_232487718
transcript_116036.known	chr2	-	2965	17	FSM	ENSG00000171551.12	ENST00000482346.1	2965	17	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_16	13.7061801753807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	9	True	NA	-1	True	AATAAA	-14	NA	232487821	232479826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485268_232485867_232486755_232487718
transcript_11604.known	chr1	+	2526	12	FSM	ENSG00000162650.17	ENST00000459635.2	2526	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	28.4070181061996	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3343	False	NA	21	True	AAAAAG	-19	NA	109483904	109492734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492026_109492105_109492585
transcript_116040.nic	chr2	-	2842	17	NIC	ENSG00000171551.12	novel	2871	18	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	24.149841484987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	NA	False	NA	-1	True	AATAAA	-14	NA	232487871	232479826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_232480253_232480398_232480476_232480717_232480814_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486755_232487718
transcript_116042.nic	chr2	-	3583	16	NIC	ENSG00000171551.12	novel	2965	17	NA	NA	-37	0	intron_retention	FALSE	canonical	3	58	junction_15	12.5052877704682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	NA	False	NA	-1	True	AATAAA	-14	NA	232487871	232479826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485268_232485867_232486755_232487718
transcript_116056.known	chr2	+	2233	13	FSM	ENSG00000237412.7	ENST00000617714.2	2233	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.276385399196283	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGGAGCTTTCTTGG	1	True	NA	NA	False	AATAAA	-23	NA	232520387	232525716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232520696_232521320_232521429_232521815_232521867_232521970_232522161_232522514_232522615_232522701_232522862_232523059_232523203_232523415_232523579_232523771_232523946_232524038_232524204_232524306_232524370_232524737_232524845_232525215
transcript_116057.known	chr2	+	3525	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	596.299506993605	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTCGTGGACTTGTC	-2	True	NA	18	True	AATAAA	-18	NA	232550682	232583642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
transcript_116058.known	chr2	+	967	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_6	142.384943804541	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	4	True	NA	14	True	AATAAA	-14	NA	232550688	232569210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_116060.known	chr2	+	3448	7	FSM	ENSG00000135930.15	ENST00000409098.5	3448	7	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_6	405.774020306322	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCGTGGACTTGTCAA	-2	True	NA	20	True	AATAAA	-20	NA	232550682	232583644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_116065.known	chr2	+	1014	6	FSM	ENSG00000135930.15	ENST00000409495.6	2693	6	0	1679	0	322	multi-exon	FALSE	canonical	3	1269	junction_5	55.1274886059577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTTTCTTGCTG	4	True	NA	NA	False	AATGAA	-8	NA	232550688	232567527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077
transcript_116066.known	chr2	+	797	6	FSM	ENSG00000135930.15	ENST00000409322.5	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	459.325418412698	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	7	True	NA	-18	True	NA	NA	NA	232550691	232569178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_116067.known	chr2	+	604	6	FSM	ENSG00000135930.15	ENST00000409394.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	552.397827656844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATAATCCTTTTCTGTA	19	True	NA	NA	False	AATACA	-29	NA	232550703	232580956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_116069.known	chr2	+	1372	5	FSM	ENSG00000135930.15	ENST00000409167.8	2550	5	0	1178	0	815	multi-exon	FALSE	canonical	3	171	junction_2	513.138139295843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCTCCATCTGTAAAG	4	True	NA	NA	False	NA	NA	NA	232550688	232568020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077
transcript_116070.known	chr2	+	1878	4	FSM	ENSG00000115468.13	ENST00000264059.8	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.96655480858378	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACAGCTATTTCTTTTT	14	True	NA	15	True	AATAAA	-20	NA	232633603	232682776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232634007_232662801_232662950_232672308_232672444_232681584
transcript_116071.known	chr2	+	7816	29	FSM	ENSG00000204120.16	ENST00000373563.9	7816	29	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	23.739739996513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	-2	True	NA	NA	False	ATTAAA	-24	NA	232697330	232860605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_11608.known	chr1	+	2448	11	FSM	ENSG00000162650.17	ENST00000683729.1	2448	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.8844867961436	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3343	False	NA	21	True	AAAAAG	-19	NA	109483904	109492734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_116085.known	chr2	+	5978	31	FSM	ENSG00000204120.16	ENST00000409547.5	5978	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	56.6361094081231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGCACCTCTTGTAC	-2	True	NA	22	True	AATAAA	-33	NA	232697330	232858627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232734416_232734487_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_116087.known	chr2	+	7878	30	FSM	ENSG00000204120.16	ENST00000629305.2	7878	30	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	52.1114692929189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAACAGAAGTGATTCT	NA	False	NA	NA	False	AATAAA	-18	NA	232697304	232860575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232776411_232776478_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_116091.known	chr2	+	2658	21	FSM	ENSG00000204120.16	ENST00000440945.5	2658	21	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	42.557343667104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGACCAGATGGTTTTG	19	False	NA	93	True	AAGAAA	-30	NA	232697351	232819982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790715_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826
transcript_116104.known	chr2	-	2286	13	FSM	ENSG00000066248.15	ENST00000373552.8	2286	13	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	11.931226536558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAGGGGGTGGGCACAC	-2	True	NA	NA	False	NA	NA	NA	232928154	232879214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232891357_232891488_232892897_232893051_232894755_232894917_232920283_232920586_232927043_232927187_232927892
transcript_116106.nic	chr2	-	1732	8	NIC	ENSG00000066248.15	novel	3184	15	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	5.41728149310244	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGAAGGTCTACTCTT	NA	False	NA	-20	True	AATAAA	-1	NA	232891016	232878700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232890933
transcript_116111.nic	chr2	+	4456	22	ISM	ENSG00000168918.14	ENST00000445964.6	4902	27	79144	0	17270	0	3prime_fragment	FALSE	canonical	3	11	junction_15	5.8554004376912	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTGTGGCGTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	233139485	233207903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_233139930_233146161_233146243_233146366_233146439_233147470_233147595_233158312_233158420_233161723_233161827_233163706_233163904_233164306_233164425_233169304_233169402_233170025_233170165_233170495_233170605_233171063_233171153_233177264_233177347_233182409_233182500_233184407_233184522_233185842_233185926_233189849_233189938_233193811_233193962_233195398_233195496_233198094_233198377_233204125_233204718_233206705
transcript_11612.known	chr1	+	2624	11	FSM	ENSG00000162650.17	ENST00000684449.1	2624	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.609568524284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATAGAAAAGGAAGGA	-1	True	NA	64	True	TATAAA	-5	NA	109483953	109492777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109484081_109486056_109486305_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_116122.known	chr2	+	3301	18	FSM	ENSG00000085978.22	ENST00000392021.7	3301	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	39.7741896104691	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	7	True	NA	28	True	AATAAA	-30	NA	233251672	233295674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251941_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_116127.known	chr2	+	3559	17	FSM	ENSG00000085978.22	ENST00000479942.5	3559	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	31.0492929669904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTCTTGGTG	16	True	NA	20	True	AATAAA	-22	NA	233251681	233295666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_116128.known	chr2	+	3213	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	19.9655954081014	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	3	True	NA	28	True	AATAAA	-30	NA	233251705	233295674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_116138.nic	chr2	+	3008	16	NIC	ENSG00000085978.22	novel	3298	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	34.7748312560807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGCCTCTTGGTGATT	-12	True	NA	23	True	AATAAA	-25	NA	233251653	233295669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_11614.nic	chr1	+	2643	10	ISM	ENSG00000162650.17	ENST00000459635.2	2526	12	-57	730	-57	-700	5prime_fragment	FALSE	canonical	3	52	junction_3	12.9881237299577	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGTGACCCTCATTCC	3286	False	NA	NA	False	NA	NA	NA	109483847	109492004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921
transcript_116142.known	chr2	+	2915	14	FSM	ENSG00000085978.22	ENST00000347464.9	2915	14	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	37.738746902242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTTGGTGATTATTT	NA	False	NA	27	True	AATAAA	-29	NA	233251570	233295673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251943_233256101_233256196_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_116147.known	chr2	+	6308	30	FSM	ENSG00000077044.11	ENST00000264057.7	6308	30	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_28	11.5247755658427	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCAGAGTCTTTGTCATC	-8	True	NA	10	True	AATAAA	-24	NA	233354493	233472098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233354675_233388256_233388368_233390402_233390484_233434379_233434485_233434768_233434902_233435817_233435925_233436315_233436442_233437376_233437480_233438216_233438380_233441886_233441996_233445622_233445763_233446711_233446797_233448086_233448182_233448275_233448376_233449102_233449377_233449981_233450132_233450921_233451051_233451963_233452061_233454762_233454874_233456898_233456996_233457220_233457329_233458283_233458398_233459756_233459892_233460193_233460346_233462347_233462460_233462642_233462736_233464163_233464284_233467085_233467204_233468422_233468554_233469370
transcript_116152.known	chr2	-	3157	9	FSM	ENSG00000123485.12	ENST00000411486.7	3157	9	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_6	41.5600093238681	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGGGTTTTTTTT	-2	True	NA	-4	True	AGTAAA	-18	NA	233854535	233836701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233849762_233849860_233852564_233852621_233853843_233853911_233854383
transcript_116153.known	chr2	-	3027	7	FSM	ENSG00000123485.12	ENST00000432087.5	3027	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	192.297006968098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTTTTTTTT	4	True	NA	-3	True	AGTAAA	-19	NA	233854566	233836700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233852564_233852621_233853843_233853911_233854383
transcript_116154.known	chr2	-	2032	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868444	233865436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233867351_233868326
transcript_116155.known	chr2	+	5150	6	FSM	ENSG00000130147.16	ENST00000392011.7	5150	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	14.4277510374971	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACGTATTTATACATACA	-7	True	NA	9	True	AATAAA	-18	NA	234952016	235055714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_234952171_234995302_234995377_235034870_235035121_235040887_235043248_235052561_235052751_235053591
transcript_116157.known	chr2	-	2140	2	FSM	ENSG00000168505.7	ENST00000306318.5	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGGCCTCATAAGTGT	1	True	NA	NA	False	AATAAA	-28	NA	236168386	236165235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_236166438_236167448
transcript_11616.nic	chr1	+	3334	10	NIC	ENSG00000162650.17	novel	2448	11	NA	NA	-57	0	intron_retention	FALSE	canonical	3	52	junction_3	12.4721912892465	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3286	False	NA	21	True	AAAAAG	-19	NA	109483847	109492734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109490129_109490270_109490393_109490921_109491718_109492585
transcript_116160.nic	chr2	-	1433	8	ISM	ENSG00000132321.17	ENST00000254653.9	3336	20	-55	95019	-52	-26841	5prime_fragment	FALSE	canonical	3	18	junction_2	4.96929346597888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAACAAAGGAGAAAAATAA	-23	True	NA	NA	False	AAAAAG	-37	NA	236507587	236419169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_116163.known	chr2	-	3215	19	FSM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	7.26079443328821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-10	True	NA	-4	True	AATAAA	-16	NA	236507476	236324150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_116165.known	chr2	+	713	2	FSM	ENSG00000144476.6	ENST00000447924.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGAGCTGGTCTCCGTTG	-6	True	NA	NA	False	NA	NA	NA	236567786	236581097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_236567842_236580439
transcript_116166.nnic	chr2	+	1237	2	NNC	ENSG00000144476.6	novel	713	2	NA	NA	-33	-11843	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTATTATAAAGACTCT	34	False	NA	NA	False	AATAAA	-13	NA	236567753	236569254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_236567842_236568105
transcript_116167.known	chr2	+	2015	2	FSM	ENSG00000144476.6	ENST00000272928.4	2015	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGTCTCAGTTTTC	0	True	NA	43	True	AATAAA	-20	NA	236569824	236582354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_236569925_236580439
transcript_116168.known	chr2	+	1654	9	FSM	ENSG00000198612.11	ENST00000392008.6	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	465.647868565937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTTAAGGTTATAACAG	-34	True	NA	-51	True	NA	NA	NA	237085881	237098618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237086043_237086731_237086797_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_116170.known	chr2	+	3438	8	FSM	ENSG00000198612.11	ENST00000354371.7	3438	8	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	57.2199479987495	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTCCAATGTGTTCT	-27	True	NA	NA	False	AATAAA	-25	NA	237085888	237100474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237086043_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_116176.known	chr2	+	3744	16	FSM	ENSG00000115648.14	ENST00000264605.8	3744	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	15.3701008454727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTAGCAGATGGCTAT	-34	True	NA	NA	False	AATAAA	-27	NA	237487250	237555322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237534563_237534648_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_116183.known	chr2	+	2332	15	FSM	ENSG00000115648.14	ENST00000338530.8	2332	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	9.05313115300278	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	-34	True	NA	24	True	AAAAAG	-21	NA	237487250	237553994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_116189.nic	chr2	+	2260	14	NIC	ENSG00000115648.14	novel	2332	15	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	14.6574294024017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	36	False	NA	24	True	AAAAAG	-21	NA	237487202	237553994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_11619.nnic	chr1	+	2400	10	NIC	ENSG00000162650.17	novel	2448	11	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	25.0909456887451	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3286	False	NA	21	True	AAAAAG	-19	NA	109483847	109492734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_109484081_109486056_109486123_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_116191.known	chr2	+	2031	13	FSM	ENSG00000115648.14	ENST00000409373.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	17.7568453154144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	-9	True	NA	24	True	AAAAAG	-21	NA	237487275	237553994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_116195.known	chr2	+	1153	4	FSM	ENSG00000115648.14	ENST00000469619.5	1153	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	10.2089285540757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTTCTTCCCTGGGAC	-10	True	NA	NA	False	NA	NA	NA	237487274	237511622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988
transcript_116209.known	chr2	-	1077	5	FSM	ENSG00000124839.13	ENST00000409822.1	1077	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	356.513236079672	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCAGCCTCTGGACAG	8212	False	NA	NA	False	NA	NA	NA	237590780	237574737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237590466
transcript_116216.known	chr2	-	1603	6	FSM	ENSG00000124839.13	ENST00000264601.8	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_4	165.486434489356	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-5	True	NA	-12	True	ATTAAA	-14	NA	237590734	237574325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237585997_237586158_237590466
transcript_116217.known	chr2	-	1792	5	FSM	ENSG00000124839.13	ENST00000392001.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	331.125731407271	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAGAAGTTTTTGAGG	7921	False	NA	-8	True	ATTAAA	-18	NA	237591071	237574321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237585997_237586158_237590466
transcript_116218.known	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	328.473438804418	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	14	True	NA	-41	True	NA	NA	NA	237590715	237574354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
transcript_116227.nic	chr2	+	2155	13	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	314	junction_4	193.083675010487	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	NA	False	NA	21	True	ATTAAA	-23	NA	237627559	237780315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_116232.nic	chr2	+	2136	12	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	412	junction_1	149.67833278663	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	NA	False	NA	21	True	ATTAAA	-23	NA	237627506	237780315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_116243.nic	chr2	+	1759	9	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-27	-1508	combination_of_known_junctions	FALSE	canonical	3	279	junction_8	260.151758594863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGTACCCGTAGAAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	237627559	237763453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_116246.known	chr2	+	3709	8	FSM	ENSG00000124831.19	ENST00000289175.10	3709	8	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	233.27832198943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACACAACACAA	3670	False	NA	NA	False	NA	NA	NA	237692144	237765279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_116249.nic	chr2	+	1683	8	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-23	-1508	combination_of_known_junctions	FALSE	canonical	3	279	junction_7	222.798343891548	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGTACCCGTAGAAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	237627563	237763453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_116256.nic	chr2	+	673	6	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-27	-2696	combination_of_known_junctions	FALSE	canonical	3	314	junction_4	234.694183992701	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTAGTATGATACA	NA	False	NA	NA	False	AAAACA	-3	NA	237627559	237753479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308
transcript_116259.nic	chr2	+	654	5	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-80	-2696	combination_of_known_junctions	FALSE	canonical	3	412	junction_1	169.353734827432	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTAGTATGATACA	NA	False	NA	NA	False	AAAACA	-3	NA	237627506	237753479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308
transcript_116261.nic	chr2	+	833	5	ISM	ENSG00000124831.19	ENST00000289175.10	3709	8	-36	11800	-36	-2696	5prime_fragment	FALSE	canonical	3	354	junction_1	192.514122858558	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTAGTATGATACA	3634	False	NA	NA	False	AAAACA	-3	NA	237692108	237753479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308
transcript_116265.known	chr2	+	857	3	FSM	ENSG00000132329.11	ENST00000404910.6	857	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTACCTCTGGAAAG	7	True	NA	-92	True	NA	NA	NA	237858892	237912010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237859128_237877223_237877363_237911527
transcript_116266.known	chr2	+	823	3	FSM	ENSG00000132329.11	ENST00000254661.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAAGACTCATTATCT	-1	True	NA	4	True	ATTAAA	-16	NA	237859622	237912106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237859728_237877223_237877363_237911527
transcript_116272.known	chr2	+	984	11	FSM	ENSG00000184182.19	ENST00000417231.5	984	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	162.551653329026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGGGCTTCTGAAGA	-8	True	NA	8	True	CATAAA	-14	NA	237967025	238041542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237973648_237973748_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116275.known	chr2	+	2137	10	FSM	ENSG00000184182.19	ENST00000272930.9	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_5	27.2591586149511	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGGGTGGCCCCTGG	-20	True	NA	NA	False	NA	NA	NA	237967013	238042782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116283.known	chr2	+	571	9	FSM	ENSG00000184182.19	ENST00000439780.5	571	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	139.11365632101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTTATGCCAGATGATA	26	True	NA	NA	False	AATAAA	-16	NA	237967059	238041320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238032221_238032255_238035877_238035941_238041287
transcript_116284.known	chr2	+	760	9	FSM	ENSG00000184182.19	ENST00000455999.5	760	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	136.514651228357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCATCTTCATGACTG	-16	True	NA	-54	True	NA	NA	NA	237967017	238041480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116287.known	chr2	+	1242	9	FSM	ENSG00000184182.19	ENST00000441728.6	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	125.840610992636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAATGTAAGTATAT	NA	False	NA	-7	True	NA	NA	NA	237966944	238041886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116292.known	chr2	+	1138	9	FSM	ENSG00000184182.19	ENST00000409332.5	1138	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	137.967783830139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTGTACAATTCA	48	False	NA	24	True	NA	NA	NA	237967081	238041917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116293.known	chr2	+	924	9	FSM	ENSG00000184182.19	ENST00000409953.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	136.622598332048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATGCAAAATCTCT	47	False	NA	20	True	NA	NA	NA	237967080	238041770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116295.known	chr2	+	803	8	FSM	ENSG00000184182.19	ENST00000433241.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	150.281368758467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGGCTGTTGGTGAAA	46	False	NA	11	True	NA	NA	NA	237967079	238041605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238035877_238035941_238041287
transcript_116298.known	chr2	+	552	8	FSM	ENSG00000184182.19	ENST00000416292.5	552	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	137.900289324999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCGGAATAAAGTGGATGA	-20	True	NA	NA	False	NA	NA	NA	237967013	238041293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116299.known	chr2	+	831	8	FSM	ENSG00000184182.19	ENST00000445676.5	831	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	176.564609207196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTCTGCACAAGCGAT	-6	True	NA	2	True	NA	NA	NA	237967027	238041692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_116311.known	chr2	+	2450	12	FSM	ENSG00000132330.18	ENST00000254663.12	2450	12	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_11	75.2750329027653	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	-23	True	NA	16	True	AATAAA	-17	NA	238061000	238099413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_116315.nic	chr2	+	1525	10	ISM	ENSG00000132330.18	ENST00000254663.12	2450	12	-36	4564	-1	0	5prime_fragment	FALSE	canonical	3	290	junction_9	59.1528674570816	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	NA	False	NA	8	True	ATTAAA	-18	NA	238060964	238094849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
transcript_116316.nic	chr2	+	2204	10	NIC	ENSG00000132330.18	novel	2450	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	133.738550911844	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	NA	False	NA	16	True	AATAAA	-17	NA	238060964	238099413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_238061144_238064356_238064470_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_116324.known	chr2	+	1774	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	32.5914725293696	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	7	True	NA	36	True	NA	NA	NA	238061030	238092083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
transcript_116332.known	chr2	+	2526	12	FSM	ENSG00000132330.18	ENST00000651534.1	2526	12	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_11	75.2750329027653	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	NA	False	NA	15	True	AATAAA	-16	NA	238060923	238099412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_116334.nic	chr2	+	1709	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	-1	-24	combination_of_known_junctions	FALSE	canonical	3	49	junction_6	148.43591958223	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGCTACATTTACT	NA	False	NA	12	True	NA	NA	NA	238060964	238092059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_116335.known	chr2	+	585	7	FSM	ENSG00000132330.18	ENST00000412508.6	585	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	149.903024207875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTACGGTGTCCCCTTCG	30	True	NA	NA	False	NA	NA	NA	238061053	238098219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_116343.known	chr2	+	542	4	FSM	ENSG00000132330.18	ENST00000413463.6	542	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	205.176888453733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAAGGTAAGTCTGCAGA	-23	True	NA	NA	False	NA	NA	NA	238061000	238082202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238081708_238081837_238082044
transcript_116344.known	chr2	+	458	3	FSM	ENSG00000132330.18	ENST00000497256.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGCTACATTTTCA	NA	False	NA	5	True	AATAAA	-17	NA	238060965	238068231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064
transcript_116345.known	chr2	+	770	2	FSM	ENSG00000132330.18	ENST00000487197.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGATGATGAACTAAAT	13	False	NA	NA	False	GATAAA	-13	NA	238061112	238065095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356
transcript_116346.known	chr2	+	4653	9	FSM	ENSG00000144488.15	ENST00000343063.8	4653	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCTTGCACTTGTT	-12	True	NA	8	True	AATAAA	-20	NA	238100339	238133287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238100714_238101940_238102132_238104655_238104843_238107790_238107974_238116902_238117035_238125269_238125385_238127621_238127735_238128706_238128905_238130127
transcript_116348.known	chr2	+	3610	4	FSM	ENSG00000144488.15	ENST00000409506.1	3610	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCTTGCACTTGTT	NA	False	NA	8	True	AATAAA	-20	NA	238127389	238133287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238127529_238127621_238127735_238128706_238128905_238130127
transcript_116350.known	chr2	+	3448	2	FSM	ENSG00000144488.15	ENST00000477241.1	3448	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCACCCCCTCTCTTGCA	1512	False	NA	2	True	AATAAA	-14	NA	238128947	238133281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238129242_238130127
transcript_116353.known	chr2	-	1455	12	FSM	ENSG00000132323.9	ENST00000254654.8	1455	12	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_8	30.2067257575484	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	18	False	238203713	-3	True	AATAAA	-22	NA	238203695	238170401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194804_238194871_238203498
transcript_116355.known	chr2	-	618	4	FSM	ENSG00000132323.9	ENST00000467133.5	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	87.244229353898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTTTCTCCTACTTTT	18	False	238203713	NA	False	AAGAAA	-42	NA	238203695	238189697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238189973_238194274_238194332_238194781_238194871_238203498
transcript_116356.known	chr2	-	587	4	FSM	ENSG00000132323.9	ENST00000498727.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	16.6799946709291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTACTTTTCATGTAC	-23	True	NA	NA	False	AATGAA	-21	NA	238203680	238189690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238189973_238194274_238194332_238194804_238194871_238203498
transcript_116358.known	chr2	-	6380	23	FSM	ENSG00000132326.12	ENST00000254657.8	6380	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	3.05087712628179	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACTTGTATGTATTTT	-4	True	NA	-6	True	AATAAA	-16	NA	238288610	238244043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238246525_238249061_238249213_238250550_238250744_238251598_238251762_238252911_238253703_238255656_238255912_238256921_238257087_238258275_238258401_238258496_238258645_238259968_238260054_238260827_238260954_238261728_238261838_238262190_238262345_238262951_238263059_238265511_238265591_238268055_238268199_238268922_238268975_238271311_238271514_238273069_238273192_238275742_238275898_238277130_238277194_238277706_238277956_238288348
transcript_116360.known	chr2	-	1368	4	FSM	ENSG00000144485.11	ENST00000272937.10	1368	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	94.5386458309804	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGAGTGATGTGTC	-1	True	NA	-8	True	AATAAA	-27	NA	238240038	238238266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239252_238239486_238239569_238239660_238239748_238239824
transcript_116361.known	chr2	-	738	4	FSM	ENSG00000144485.11	ENST00000409574.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	158.728979360698	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGCCCGGAGTGTCTG	-4	True	NA	NA	False	NA	NA	NA	238240041	238238859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239252_238239526_238239569_238239660_238239748_238239824
transcript_116362.nic	chr2	-	1270	4	NIC	ENSG00000144485.11	novel	1368	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	152.623720305855	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTATTGTTGAGTGAT	-3	True	NA	-13	True	AATAAA	-22	NA	238240040	238238271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_238239157_238239486_238239569_238239660_238239748_238239824
transcript_116363.known	chr2	-	691	3	FSM	ENSG00000186235.12	ENST00000409942.5	881	3	186	4	60	0	multi-exon	FALSE	canonical	2	3	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTCAATTTATTCACCG	9144	False	NA	NA	False	AATAAA	-14	NA	238231525	238225115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238225500_238227683_238227799_238231333
transcript_116364.known	chr2	-	1888	3	FSM	ENSG00000186235.12	ENST00000470346.3	1988	3	93	7	-28	-4	multi-exon	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCTTCAATTTATTC	9056	False	NA	NA	False	AATAAA	-10	NA	238231613	238225119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238226613_238227683_238227799_238231333
transcript_116365.known	chr2	-	863	3	FSM	ENSG00000144485.11	ENST00000409182.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	62	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGAGGGAGCTACGGG	711	False	NA	NA	False	AAGAAA	-31	NA	238239958	238238604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239252_238239486_238239569_238239824
transcript_116366.known	chr2	-	1600	3	FSM	ENSG00000144485.11	ENST00000409160.7	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	16.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATTGTTGAGTGATGT	-1	True	NA	-11	True	AATAAA	-24	NA	238240038	238238269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239569_238239660_238239748_238239824
transcript_116368.known	chr2	-	598	2	FSM	ENSG00000186235.12	ENST00000466075.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTTTGTTAAAGGGCC	-3	True	NA	NA	False	NA	NA	NA	238231677	238227544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238227799_238231333
transcript_11637.known	chr1	+	5009	4	FSM	ENSG00000174151.15	ENST00000310611.8	5009	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTATGTTCTTGTCCT	7	True	NA	21	True	ATTAAA	-18	NA	109494098	109500433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109494288_109494519_109494624_109495142_109495181_109495755
transcript_116370.known	chr2	-	530	2	FSM	ENSG00000144485.11	ENST00000450098.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGCCGGCTACATCCAG	668	False	NA	NA	False	NA	NA	NA	238240001	238239215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239569_238239824
transcript_116371.known	chr2	+	4003	15	FSM	ENSG00000204104.12	ENST00000391993.7	4003	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	14.449066066846	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTCAAATTGTATCATA	NA	False	NA	6	True	AGTAAA	-16	NA	238320440	238400822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238320786_238325305_238325375_238325808_238325971_238328685_238328830_238328925_238329343_238332823_238332896_238333959_238334036_238347454_238347476_238348763_238348849_238349324_238349409_238352826_238352951_238353172_238353210_238356003_238356081_238397458_238397680_238398753
transcript_116379.nnic	chr2	+	1173	5	NNC	ENSG00000065802.12	novel	6891	5	NA	NA	-27	81	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	61.4791631367897	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGTTCTGGATTTTC	8	True	NA	31	True	ACTAAA	-21	NA	238426976	238446732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_238427120_238433553_238433696_238435710_238435864_238444341_238444728_238446383
transcript_11638.known	chr1	+	913	3	FSM	ENSG00000174151.15	ENST00000533024.5	913	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGATGAAAAACTGGGTTC	-12	True	NA	NA	False	NA	NA	NA	109494079	109496555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109494155_109495142_109495181_109495755
transcript_116381.known	chr2	+	6891	5	FSM	ENSG00000065802.12	ENST00000264607.9	6891	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.0242493430549	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGTGTTCTGCCTC	-1	True	NA	18	True	AATAAA	-24	NA	238426926	238452250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238427120_238433553_238433696_238435710_238436014_238444341_238444728_238446383
transcript_116383.known	chr2	+	878	4	FSM	ENSG00000065802.12	ENST00000409297.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	50.2084543567006	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAAGATGTCCTCGTAG	-31	True	NA	-84	True	NA	NA	NA	238427003	238446617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238427120_238433553_238433696_238444341_238444728_238446383
transcript_116385.known	chr2	+	1048	4	FSM	ENSG00000065802.12	ENST00000438264.5	1048	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.4899144264196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGCCTGGGCCGCTGA	-6	True	NA	-50	True	NA	NA	NA	238427028	238446651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238427120_238435710_238436014_238444341_238444728_238446383
transcript_116386.nnic	chr2	+	851	3	NIC	ENSG00000065802.12	novel	878	4	NA	NA	0	81	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	76.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGTTCTGGATTTTC	-31	True	NA	31	True	ACTAAA	-21	NA	238427003	238446732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_238427120_238444341_238444728_238446383
transcript_116388.known	chr2	+	1342	2	FSM	ENSG00000233608.4	ENST00000612363.2	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCTCCCCATCTCT	24	True	NA	3	True	AATAAA	-13	NA	238848084	238910534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238848734_238909841
transcript_11639.known	chr1	+	4912	3	FSM	ENSG00000174151.15	ENST00000420578.7	4912	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTCTTGTCCTTC	2	True	NA	23	True	ATTAAA	-20	NA	109494093	109500435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109494288_109495142_109495181_109495755
transcript_116392.known	chr2	-	8461	27	FSM	ENSG00000068024.18	ENST00000543185.6	8461	27	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_26	12.3286480252369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCCCGTGC	-3	True	NA	-2	True	AATAAA	-23	NA	239401020	239048167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400977
transcript_11640.known	chr1	-	5130	2	FSM	ENSG00000181754.7	ENST00000369864.5	5130	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGACTGGTTTATTTT	-8	True	NA	-5	True	ATTAAA	-26	NA	109509727	109504177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109509000_109509419
transcript_116407.known	chr2	-	3188	17	FSM	ENSG00000068024.18	ENST00000493582.5	3188	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	17.9006590311642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTAGGGCTACTC	-3	True	NA	NA	False	GGGGCT	-35	NA	239401654	239094573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239401401
transcript_116410.nic	chr2	-	3621	17	ISM	ENSG00000068024.18	ENST00000543185.6	8461	27	0	45763	0	643	5prime_fragment	FALSE	canonical	3	26	junction_16	14.5296034013321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCCTCCTAGAGTTAT	-3	True	NA	-2	True	AATAAA	-22	NA	239401020	239093930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400977
transcript_116415.known	chr2	+	455	2	FSM	ENSG00000222020.4	ENST00000413029.2	560	2	102	3	55	2	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATCTCATTAATAATTA	35	False	NA	26	True	AATAAA	-23	NA	239401804	239402364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_239401970_239402074
transcript_116416.known	chr2	+	401	2	FSM	ENSG00000222020.4	ENST00000691044.1	493	2	42	50	12	-13	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATTTTACATTTCCTT	-8	True	NA	6	True	AATAAA	-3	NA	239401761	239402344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_239401893_239402074
transcript_116417.known	chr2	-	2931	11	FSM	ENSG00000130414.13	ENST00000676929.1	2931	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	199.440718009137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAAAAATCCCAGCTT	-3	True	NA	12	True	AATAAA	-31	NA	240025389	239957357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239959038_239961022_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_116419.known	chr2	-	4855	10	FSM	ENSG00000130414.13	ENST00000252711.7	4855	10	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	52.9947586506859	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTGGTGATTATATT	-5	True	NA	-2	True	AATAAA	-17	NA	240025342	239957371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_116420.known	chr2	-	1580	10	FSM	ENSG00000130414.13	ENST00000444548.6	1580	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	208.720972699066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTAATGTCTTTGT	-3	True	NA	-25	True	NA	NA	NA	240025340	239969220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239969763_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_116421.known	chr2	-	4509	9	FSM	ENSG00000130414.13	ENST00000485344.6	4509	9	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	47.2149340781071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCCCATCGTACGTCT	14	True	NA	-20	True	AATAAA	-15	NA	240025323	239960740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_116422.known	chr2	-	1332	9	FSM	ENSG00000130414.13	ENST00000679158.1	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	219.250106898492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTGGTTTCAGCGCT	-3	True	NA	-112	True	AAAACA	-32	NA	240025389	239960832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239961187_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_116424.known	chr2	-	699	4	FSM	ENSG00000130414.13	ENST00000407129.3	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_3	25.8370965001015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTTCCTAAGTATCTTC	30	True	NA	NA	False	AATAAA	-33	NA	240025307	240018406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240018640_240021196_240021413_240022171_240022341_240025226
transcript_116425.known	chr2	-	640	3	FSM	ENSG00000172428.11	ENST00000489698.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	880	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	4495	False	NA	-24	True	ATTAAA	-15	NA	240136176	240130827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240131089_240133932_240134006_240135870
transcript_116426.known	chr2	-	418	3	FSM	ENSG00000172428.11	ENST00000607357.2	418	3	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_2	143	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-6	True	NA	-24	True	ATTAAA	-15	NA	240136305	240130827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240131089_240133932_240134006_240136221
transcript_116427.known	chr2	-	609	2	FSM	ENSG00000172428.11	ENST00000403160.4	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGACTTGGCAGCCAATG	3864	False	NA	NA	False	NA	NA	NA	240136807	240133982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240134006_240136221
transcript_11643.known	chr1	-	2229	2	FSM	ENSG00000181754.7	ENST00000369862.1	2229	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAAATTTTTTCTA	-19	True	NA	NA	False	AAAACA	-4	NA	109509738	109507067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109508978_109509419
transcript_116430.nic	chr2	+	3706	10	NIC	ENSG00000063660.9	novel	3719	9	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_9	75.0009053443299	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCGAGGCCTCGGG	138	False	NA	22	True	AATAAA	-15	NA	240435599	240468076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057_240466370_240466445
transcript_116432.nnic	chr2	+	3544	10	NNC	ENSG00000063660.9	novel	3719	9	NA	NA	-63	-2	intron_retention	FALSE	canonical	0	0	junction_9	76.9931855249797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCAGGGCGAGGCCTCG	138	False	NA	20	True	AATAAA	-13	NA	240435599	240468074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057_240467388_240467623
transcript_116435.known	chr2	+	3719	9	FSM	ENSG00000063660.9	ENST00000264039.7	3719	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	34.1796723214252	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCGAGGCCTCGGG	-23	True	NA	22	True	AATAAA	-15	NA	240435662	240468076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_116438.known	chr2	+	1835	9	FSM	ENSG00000063660.9	ENST00000420138.5	1835	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.9749189564275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCCAAAAATACAACACAGA	-7	True	NA	-23	True	NA	NA	NA	240452810	240466330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240453095_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_11645.known	chr1	+	9044	9	FSM	ENSG00000065135.12	ENST00000369851.7	9044	9	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	75.2420053892771	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGGCAAAAGAAAGATAAT	8	True	NA	NA	False	AATAAA	-29	NA	109548614	109600195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592344
transcript_116450.known	chr2	-	1569	6	FSM	ENSG00000144504.16	ENST00000496300.5	1569	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.70613704707484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACCCACGTCTCTTCCC	24	True	NA	NA	False	NA	NA	NA	240560768	240523822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240524382_240525684_240525850_240529036_240529510_240552913_240553058_240554865_240555056_240560730
transcript_116451.known	chr2	-	3304	5	FSM	ENSG00000144504.16	ENST00000405002.5	3304	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.71036092035419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGTCCGCATCACCT	-29	True	NA	-13	True	AATAAA	-16	NA	240561091	240521937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240524382_240525684_240525850_240552913_240553058_240554865_240555056_240560730
transcript_116453.known	chr2	-	2969	3	FSM	ENSG00000144504.16	ENST00000484526.5	2969	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGGTCCGCATCACC	-29	True	NA	-14	True	AATAAA	-15	NA	240561091	240521938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240524382_240525684_240525850_240560730
transcript_116454.known	chr2	+	4648	2	FSM	ENSG00000188542.10	ENST00000405954.2	4648	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTTCCAATACTCG	-4	True	NA	NA	False	AGTAAA	-20	NA	240560356	240565256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240561078_240561329
transcript_116458.known	chr2	-	4000	1	FSM	ENSG00000260942.1	ENST00000567819.1	4000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTCCGCTGTTAACAG	605	False	NA	46	True	NA	NA	NA	240586699	240582699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240582700_240586700
transcript_116474.nic	chr2	+	3012	12	NIC	ENSG00000142330.20	novel	2621	12	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_9	61.5910265010622	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGTCTTGCTCCAGGTA	-13	True	NA	13	True	AATAAA	-22	NA	240586727	240599104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240595933_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
transcript_116477.known	chr2	+	2453	12	FSM	ENSG00000142330.20	ENST00000270361.15	2453	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.2417619151562	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	130	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591001_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
transcript_116478.known	chr2	+	2320	12	FSM	ENSG00000142330.20	ENST00000391983.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.0916481851381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCTCCAGGTAGTTCC	130	False	NA	18	True	AATAAA	-27	NA	240586870	240599109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240596849_240596943_240597887_240598088_240598351_240598398_240598650
transcript_116490.known	chr2	+	2202	11	FSM	ENSG00000142330.20	ENST00000357048.8	2202	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	51.4178957173473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	130	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240597887_240598088_240598351_240598398_240598650
transcript_11650.known	chr1	+	4081	19	FSM	ENSG00000116337.20	ENST00000528667.7	4081	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	52.0247151616837	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	-24	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109620279_109620913_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_116502.known	chr2	+	1999	10	FSM	ENSG00000142330.20	ENST00000354082.8	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	54.8738170940307	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	130	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240597887_240598088_240598351_240598398_240598650
transcript_116506.nic	chr2	+	3797	10	NIC	ENSG00000142330.20	novel	2621	12	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	58.4759104141648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGTCTTGCTCCAGGTA	-10	True	NA	13	True	AATAAA	-22	NA	240586730	240599104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240596943_240597887_240598088_240598351_240598398_240598650
transcript_11652.known	chr1	+	3728	18	FSM	ENSG00000116337.20	ENST00000342115.8	3728	18	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	20.6241703198961	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	-24	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_116521.known	chr2	+	787	2	FSM	ENSG00000142330.20	ENST00000463653.1	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCCTCAGATCTCT	-7	True	NA	NA	False	AATAAA	-43	NA	240586733	240589810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342
transcript_116528.known	chr2	-	5918	48	FSM	ENSG00000130294.18	ENST00000650130.1	5918	48	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_47	89.2767022290098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTTATTTCTAATGCC	0	True	NA	0	True	NA	NA	NA	240821036	240716975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240757318_240757595_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820915
transcript_11653.known	chr1	+	3899	18	FSM	ENSG00000116337.20	ENST00000256578.8	3899	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	39.9882335635048	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	43	False	NA	15	True	AATAAA	-15	NA	109620653	109632051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_116535.known	chr2	-	8987	47	FSM	ENSG00000130294.18	ENST00000649096.1	8987	47	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_37	58.0023180880875	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCTGCTGTGGCTTTA	1019	False	NA	1	True	AATAAA	-27	NA	240820372	240713760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_116536.known	chr2	-	5859	48	FSM	ENSG00000130294.18	ENST00000648129.1	5859	48	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_23	79.5103906303967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAACTATAAGACTTGT	3	True	NA	-14	True	AATATA	-34	NA	240820212	240717004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240757318_240757595_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_116545.known	chr2	-	3993	5	FSM	ENSG00000122085.17	ENST00000464344.6	3993	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	26.0480325552622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGCTTCTAAAATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	241102332	241072168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241075683_241089187_241089366_241089979_241090045_241094276_241094433_241102252
transcript_116546.known	chr2	-	2626	5	FSM	ENSG00000122085.17	ENST00000455202.6	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	24.8445164976097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTCATGTGATTTGTAA	NA	False	NA	-40	True	ATTAAA	-12	NA	241102331	241087224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241097242_241097428_241102252
transcript_11655.known	chr1	+	3989	17	FSM	ENSG00000116337.20	ENST00000474459.6	3989	17	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	19.5687889252248	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATGAGGCAGGTGGG	-30	True	NA	8	True	AATAAA	-8	NA	109619830	109632044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_116550.known	chr2	-	614	4	FSM	ENSG00000122085.17	ENST00000476564.5	614	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	25.0377492776186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGGGAAATGCTGGCT	-20	True	NA	NA	False	NA	NA	NA	241102320	241089040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241102252
transcript_116552.known	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3648246606609	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	13	True	NA	-16	True	AATAAA	-16	NA	241102287	241095570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
transcript_116554.known	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	45.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	1	True	NA	NA	False	NA	NA	NA	241102299	241095868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241096439_241097242_241097428_241102252
transcript_116556.known	chr2	-	4540	18	FSM	ENSG00000115687.14	ENST00000234040.9	4540	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	36.3397082330564	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTGGATGTTGTGA	-2	True	NA	-5	True	ATTAAA	-24	NA	241149472	241106098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115042_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_116557.known	chr2	-	4326	18	FSM	ENSG00000115687.14	ENST00000358649.8	4326	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	52.3916578583727	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGAAGGCATGAGTG	836	False	NA	-13	True	ATTAAA	-17	NA	241149435	241106296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115021_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_116571.known	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	95.0451484659453	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	-13	True	NA	21	True	TATAAA	-18	NA	241150466	241183652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_116575.known	chr2	+	965	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	97.3420997051122	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	0	True	NA	18	True	AATAAA	-19	NA	241150479	241167174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_116579.known	chr2	+	959	9	FSM	ENSG00000115685.15	ENST00000423280.5	959	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	161.288900346552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCGGCAGATCGATGC	24	True	NA	NA	False	NA	NA	NA	241149612	241182784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_116581.known	chr2	+	1954	9	FSM	ENSG00000115685.15	ENST00000272983.12	1954	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	163.485043276136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGCCGTTGCAAT	17	False	NA	-12	True	AATAAA	-40	NA	241149657	241182985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_116584.known	chr2	+	883	8	FSM	ENSG00000115685.15	ENST00000402734.5	883	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	174.676026648519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTTGTTTTTTTCT	3	True	NA	16	True	AATAAA	-17	NA	241149591	241167172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_116586.known	chr2	+	820	8	FSM	ENSG00000115685.15	ENST00000401987.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	177.024960767384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	16	True	NA	18	True	AATAAA	-19	NA	241150495	241167174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_116590.known	chr2	+	583	6	FSM	ENSG00000115685.15	ENST00000439916.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	211.260976046216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAACTTAAGCAACTTAC	-13	True	NA	NA	False	AATAAA	-12	NA	241150466	241160433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158465_241158550_241159212_241159344_241160331
transcript_116591.known	chr2	+	2196	2	FSM	ENSG00000146205.15	ENST00000487192.1	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCCTTGGAGTTCTA	NA	False	NA	10	True	NA	NA	NA	241218184	241225184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241218382_241223185
transcript_116614.known	chr2	-	6372	28	FSM	ENSG00000115677.18	ENST00000391975.5	6372	28	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_27	231.316047550954	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCGCCTGTGTGTTCT	NA	False	NA	-4	True	AATAAA	-41	NA	241272886	241227263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241272760
transcript_116616.known	chr2	-	4489	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_27	201.263771265826	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	424	False	NA	NA	False	AATAAA	-26	NA	241315292	241229211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
transcript_116617.known	chr2	-	6322	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_27	210.721616003919	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGCTGGGACTCAT	-10	True	NA	-31	True	AATAAA	-14	NA	241315672	241227290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_11663.nnic	chr1	+	1234	9	NNC	ENSG00000134184.13	novel	1164	8	NA	NA	-521	0	intron_retention	FALSE	canonical	2	9	junction_1	63.9648340887397	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	109687292	109693745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_109687388_109687841_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
transcript_11664.known	chr1	+	1394	8	FSM	ENSG00000168765.18	ENST00000369836.9	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	13.399664936414	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	-15	True	NA	13	True	AATAAA	-13	NA	109656098	109661700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_116654.nic	chr2	+	2149	15	NIC	ENSG00000168385.18	novel	1734	17	NA	NA	-90	-75	combination_of_known_junctions	FALSE	canonical	3	165	junction_2	1536.74522372873	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAGATATATCTTTAT	248	False	NA	15	True	AATAAA	-16	NA	241315770	241352551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241315983_241316421_241316541_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_11666.known	chr1	+	1166	8	FSM	ENSG00000213366.13	ENST00000241337.9	1166	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	11.647895491794	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	-19	True	NA	NA	False	AGTAAA	-13	NA	109668056	109675286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669470_109669572_109671286_109671383_109671472_109671584_109674746
transcript_11667.known	chr1	+	1164	8	FSM	ENSG00000134184.13	ENST00000309851.10	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	25.0199920063936	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	9	True	NA	NA	False	AGTAAA	-13	NA	109687816	109693745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
transcript_116672.known	chr2	+	3446	14	FSM	ENSG00000168385.18	ENST00000616972.4	3446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1411.51329258634	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	-5	True	NA	NA	False	AATAAA	-20	NA	241315860	241354024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241316421_241316556_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_116683.nic	chr2	+	1937	14	NIC	ENSG00000168385.18	novel	1734	17	NA	NA	0	-75	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	1344.97578782017	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAGATATATCTTTAT	-2	True	NA	15	True	AATAAA	-16	NA	241315863	241352551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241315983_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_116684.nic	chr2	+	3413	14	NIC	ENSG00000168385.18	novel	1734	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	1344.97578782017	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	-2	True	NA	NA	False	AATAAA	-23	NA	241315863	241354027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241315983_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_116685.known	chr2	+	3333	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1434.56164056889	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	4	True	NA	NA	False	AATAAA	-23	NA	241315927	241354027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_116691.known	chr2	+	3701	13	FSM	ENSG00000168385.18	ENST00000391973.6	3701	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	1077.97444762027	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	-5	True	NA	NA	False	AATAAA	-20	NA	241315099	241354024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315611_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_116702.known	chr2	+	3251	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	312.962324676097	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	1	True	NA	NA	False	AATAAA	-23	NA	241315924	241354027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_11671.known	chr1	+	1028	7	FSM	ENSG00000134184.13	ENST00000349334.7	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	71.6674418562727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCTGTGTGTCTTGTC	-4	True	NA	NA	False	AGTAAA	-11	NA	109687839	109693743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109693205
transcript_116720.known	chr2	+	3267	12	FSM	ENSG00000168385.18	ENST00000407971.5	3267	12	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	1125.52503818007	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	17	False	NA	NA	False	AATAAA	-23	NA	241315882	241354027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_11673.known	chr1	+	790	6	FSM	ENSG00000134184.13	ENST00000369819.2	790	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	78.1035210473894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGCTCAGCCCCGAGCT	14	False	NA	NA	False	TTTAAA	-23	NA	109687857	109693619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109693205
transcript_116741.nic	chr2	-	1242	7	ISM	ENSG00000115677.18	ENST00000310931.10	6322	28	-183	28912	-35	180	5prime_fragment	FALSE	canonical	3	462	junction_6	290.222759272942	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTTATGAGGAGAAGG	NA	False	NA	-19	True	NA	NA	NA	241315855	241256202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_116744.known	chr2	+	659	5	FSM	ENSG00000168385.18	ENST00000473479.5	659	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	1588.18489162944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAACACCTGGATT	12	True	NA	NA	False	NA	NA	NA	241315935	241336336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335958
transcript_116748.known	chr2	+	740	4	FSM	ENSG00000168385.18	ENST00000482304.5	740	4	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	349.153579707014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGACTGTTGAATGAAA	-2	True	NA	NA	False	NA	NA	NA	241315863	241335599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125
transcript_11675.known	chr1	-	4046	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	7.8141681892442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCCATGTGCCTAATTT	547	False	NA	NA	False	AATAAA	-25	NA	109740516	109733931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
transcript_116763.known	chr2	+	4009	27	FSM	ENSG00000006607.14	ENST00000264042.8	4009	27	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_19	16.8608997633104	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATTCTCCTCTGCCTG	-5	True	NA	10	True	AATAAA	-18	NA	241356284	241494841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241468139_241468378_241475856_241475988_241483464_241483534_241484241_241484332_241489961_241490045_241491060_241491180_241491515_241491680_241492928_241493037_241493292_241493445_241494007
transcript_116768.known	chr2	+	2122	18	FSM	ENSG00000006607.14	ENST00000627550.2	2122	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	17.9680608601113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGCCTGTCCCACCTTC	-1	True	NA	NA	False	NA	NA	NA	241356288	241465778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241465673
transcript_11677.known	chr1	-	1118	7	FSM	ENSG00000134202.12	ENST00000488824.1	1118	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	7.51480021173033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTCCAGCTGAGTTT	762	False	NA	-7	True	AATGAA	-14	NA	109740301	109736975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832
transcript_116781.known	chr2	-	4515	12	FSM	ENSG00000115694.15	ENST00000316586.9	4515	12	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_11	152.484764175917	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCACAAACCCATCCAA	9	True	NA	NA	False	AATAAA	-20	NA	241508584	241492669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508442
transcript_116782.known	chr2	-	2210	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	252.580532939169	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	4	False	NA	-5	True	AATAAA	-18	NA	241508688	241495016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
transcript_116812.known	chr2	-	2251	11	FSM	ENSG00000115694.15	ENST00000401869.5	2251	11	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_7	86.1890944377536	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGGTGTGTGTGGTGG	-22	True	NA	-7	True	AATAAA	-16	NA	241508362	241495018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005
transcript_116813.known	chr2	-	2459	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	252.400891440581	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	-3	False	NA	-1	True	AATAAA	-40	NA	241508695	241494706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
transcript_11682.known	chr1	+	3994	9	FSM	ENSG00000184371.14	ENST00000329608.11	3994	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	2.12132034355964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGTCGTGGGAAAGT	0	True	NA	8	True	AATAAA	-18	NA	109910848	109930992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109911063_109914258_109914382_109915633_109915697_109917292_109917464_109921846_109921995_109923165_109924191_109924775_109924829_109925146_109925203_109928851
transcript_116829.known	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_10	282.060082251991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
transcript_116835.known	chr2	-	1904	11	FSM	ENSG00000115694.15	ENST00000405883.7	1904	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	304.860705896972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	0	True	NA	-10	True	AATAAA	-13	NA	241508556	241495021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241508005_241508136_241508442
transcript_11684.known	chr1	+	1083	9	FSM	ENSG00000184371.14	ENST00000420111.6	1083	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	2.59807621135332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCAGAGGATGCTCCC	10	False	NA	NA	False	NA	NA	NA	109910907	109929034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109911063_109914258_109914382_109915633_109915697_109917292_109917464_109921846_109921995_109924059_109924191_109924775_109924829_109925146_109925203_109928851
transcript_11692.known	chr1	+	3943	17	FSM	ENSG00000168710.18	ENST00000369799.10	3943	17	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	34.6968455878917	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGTCCGTATGTGTCA	-38	True	NA	33	True	ATTAAA	-25	NA	109984764	110023742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109985173_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_116927.known	chr2	-	2024	7	FSM	ENSG00000115694.15	ENST00000487962.5	2024	7	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_4	68.5370945790185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCACTTTCAATAAAGACC	8720	False	NA	9	True	NA	NA	NA	241499972	241495049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256
transcript_116932.known	chr2	+	2626	5	FSM	ENSG00000176720.6	ENST00000318407.5	2626	5	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_1	31.7804971641414	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	1	True	NA	22	True	AATAAA	-28	NA	241558744	241574131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241558994_241559454_241559704_241562347_241562477_241570124_241570289_241572296
transcript_116936.nnic	chr2	+	2520	5	NNC	ENSG00000176720.6	novel	2626	5	NA	NA	201	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.0079360080935	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	18	True	NA	22	True	AATAAA	-28	NA	241558945	241574131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_241559089_241559454_241559704_241562347_241562477_241570124_241570289_241572296
transcript_116937.nnic	chr2	+	2481	4	NIC	ENSG00000176720.6	novel	2626	5	NA	NA	-33	-14	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	43.4920171474669	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTTGTCATTTTAGACAGA	7319	False	NA	8	True	AATAAA	-14	NA	241558711	241574117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241558994_241559454_241559704_241562347_241562477_241572296
transcript_116938.nnic	chr2	+	2530	4	NIC	ENSG00000176720.6	novel	2626	5	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	59.9184631163235	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	7319	False	NA	22	True	AATAAA	-28	NA	241558711	241574131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241558994_241559454_241559704_241570124_241570289_241572296
transcript_116943.nnic	chr2	+	2293	3	NIC	ENSG00000176720.6	novel	2626	5	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	67	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	7307	False	NA	22	True	AATAAA	-28	NA	241558699	241574131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241558994_241570124_241570289_241572296
transcript_11695.known	chr1	+	2503	17	FSM	ENSG00000168710.18	ENST00000359172.3	2503	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	201.30076999356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAATTAAGGAGA	23	True	NA	NA	False	NA	NA	NA	110004130	110022389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110004452_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_116954.known	chr2	-	2076	6	FSM	ENSG00000176946.13	ENST00000407315.6	2076	6	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	35.3134535269492	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-43	True	NA	-2	True	AATAAA	-38	NA	241637158	241584404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
transcript_116962.known	chr2	-	785	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	256.902218752583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	2173	False	NA	-2	True	AATAAA	-38	NA	241617501	241584404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
transcript_116975.nic	chr2	+	1626	14	NIC	ENSG00000168397.17	novel	1566	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_3	199.550056006184	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	14	False	NA	-16	True	NA	NA	NA	241637661	241672592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_116976.nic	chr2	+	2865	14	NIC	ENSG00000168397.17	novel	2797	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_3	199.550056006184	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	-4	True	NA	74	True	AAAACA	-3	NA	241637687	241673857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_116979.known	chr2	+	2414	13	FSM	ENSG00000168397.17	ENST00000482507.5	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	207.661984965954	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	6	True	NA	23	True	ATTAAA	-22	NA	241637697	241672631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
transcript_116984.known	chr2	+	2797	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_7	74.2836156602218	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	1	True	NA	74	True	AAAACA	-3	NA	241637692	241673857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_116986.known	chr2	+	3294	13	FSM	ENSG00000168397.17	ENST00000405546.7	3294	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	185.347927333074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTGTCTATTTTTT	NA	False	NA	71	True	NA	NA	NA	241637212	241673854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671426_241672190
transcript_116987.known	chr2	+	1685	13	FSM	ENSG00000168397.17	ENST00000402096.5	1685	13	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_12	188.924349204178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGACATGAATTTCT	NA	False	NA	20	True	ATTAAA	-19	NA	241637611	241672628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671442_241672190
transcript_116995.nic	chr2	+	2397	12	ISM	ENSG00000168397.17	ENST00000402096.5	1685	13	40	-3	-10	0	intron_retention	FALSE	canonical	3	555	junction_7	74.6029711592315	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	4	True	NA	23	True	ATTAAA	-22	NA	241637651	241672631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
transcript_117011.nic	chr2	+	1841	11	NIC	ENSG00000168397.17	novel	2797	13	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_5	199.778402236078	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-16	True	NA	NA	NA	241637230	241672592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_117025.nic	chr2	+	1543	8	ISM	ENSG00000168397.17	ENST00000402096.5	1685	13	76	5006	-5	-599	5prime_fragment	FALSE	canonical	3	555	junction_7	90.4681700705744	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGCAGAAGGGAAAACCA	-4	True	NA	NA	False	AATAAA	-13	NA	241637687	241667622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644
transcript_117026.known	chr2	+	807	7	FSM	ENSG00000168397.17	ENST00000425239.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	88.6367430709309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTTATGAAGGCCCT	15	False	NA	NA	False	NA	NA	NA	241637706	241659448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107
transcript_117034.known	chr2	+	1103	6	FSM	ENSG00000168397.17	ENST00000483778.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	276.172844428992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCATTGCCTTTTTCAC	14	False	NA	NA	False	NA	NA	NA	241637661	241659772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241659107
transcript_117039.known	chr2	+	762	5	FSM	ENSG00000168397.17	ENST00000475195.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	89.5610825079733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTTTTGAGCACTGT	1	True	NA	3	True	AGTAAA	-27	NA	241637692	241655002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545
transcript_117049.known	chr2	-	1051	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	183.80016322082	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	-11	True	NA	-10	True	AGTAAA	-15	NA	241686815	241675746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
transcript_117050.known	chr2	-	926	5	FSM	ENSG00000168393.13	ENST00000432348.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	465.059404807601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGCCCACTGGAGACGC	94	False	NA	NA	False	NA	NA	NA	241686742	241676122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241676238_241678451_241678650_241681918_241682334_241685768_241685878_241686653
transcript_117053.known	chr2	-	1089	4	FSM	ENSG00000168393.13	ENST00000400770.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	327.031429002712	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	NA	False	NA	-10	True	AGTAAA	-15	NA	241686944	241675746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241676238_241678451_241678650_241685768_241685878_241686653
transcript_117059.known	chr2	-	890	2	FSM	ENSG00000168393.13	ENST00000464603.1	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCTCCCACCTCAGCA	23	True	NA	NA	False	NA	NA	NA	241686781	241685115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241685878_241686653
transcript_117069.known	chr2	+	946	8	FSM	ENSG00000168395.16	ENST00000406941.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.9177118520254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTGCCTGTGCT	0	True	NA	11	True	AATAAA	-21	NA	241702045	241724036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241723790
transcript_117071.known	chr2	+	5197	8	FSM	ENSG00000168395.16	ENST00000313552.11	5197	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	67.2976938077133	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGAAAGTGCATCTGTA	-7	True	NA	NA	False	AATAAA	-22	NA	241702038	241729478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988
transcript_117077.nnic	chr2	+	3072	8	NNC	ENSG00000168395.16	novel	351	2	NA	NA	397	-1811	intron_retention	FALSE	canonical	0	0	junction_4	82.835465144552	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTGTGCTTTTTGTTT	-11	True	NA	13	True	AATGAA	-10	NA	241702461	241725995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_241703884_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988
transcript_117082.known	chr2	+	920	6	FSM	ENSG00000168395.16	ENST00000489509.1	920	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.2087572469991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGCTCTGGATCTAGC	19	False	NA	NA	False	NA	NA	NA	241702064	241719919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241719482
transcript_117085.known	chr2	+	822	5	FSM	ENSG00000168395.16	ENST00000492488.5	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.8617522019678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAGGAGGATGGTGAG	-11	True	NA	NA	False	NA	NA	NA	241702034	241712380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977
transcript_117087.known	chr2	+	543	4	FSM	ENSG00000168395.16	ENST00000493261.5	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	19.8158185969358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGCTTACGCCTG	0	True	NA	NA	False	NA	NA	NA	241702045	241711623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376
transcript_117091.known	chr2	+	2566	10	FSM	ENSG00000180902.18	ENST00000321264.9	2566	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.51114903288161	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTCTTTGCTTCTGTTA	-4	True	NA	11	True	AGTAAA	-19	NA	241734629	241768811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241734696_241735132_241735517_241741032_241741091_241742434_241742575_241743621_241743816_241744708_241744878_241750150_241750295_241751245_241751389_241755848_241756015_241767709
transcript_117098.known	chr2	+	2208	9	FSM	ENSG00000180902.18	ENST00000403782.5	2208	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.5274698163675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCTCTTTGCTTCTGT	NA	False	NA	9	True	AGTAAA	-17	NA	241734601	241768809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241734696_241741032_241741091_241742434_241742575_241743621_241743816_241744708_241744878_241750150_241750295_241751245_241751389_241755848_241756015_241767709
transcript_117101.known	chr2	-	2097	5	FSM	ENSG00000188389.11	ENST00000334409.10	2097	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.08972473588517	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTCTGTCCTGTCTGGT	1	True	NA	NA	False	ATTAAA	-17	NA	241858894	241849883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241851298_241851948_241851984_241852197_241852354_241852620_241852981_241858762
transcript_117103.known	chr2	-	507	3	FSM	ENSG00000216921.9	ENST00000401641.2	507	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTCTAGCGCATCTCT	NA	False	NA	NA	False	NA	NA	NA	241902551	241894036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241894340_241897185_241897335_241902496
transcript_117105.known	chr2	+	557	4	FSM	ENSG00000220804.10	ENST00000444990.6	577	4	20	0	-5	0	multi-exon	FALSE	canonical	2	10	junction_2	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGCATATGAGGAGCTT	-25	True	NA	NA	False	AAAACA	-45	NA	242088678	242116372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182
transcript_117106.known	chr20	-	1576	11	FSM	ENSG00000196476.12	ENST00000360321.7	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	56.7645135626123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-7	True	NA	-14	True	AATAAA	-18	NA	290750	270862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290590
transcript_117107.nic	chr20	-	1541	10	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	318	0	-3	0	3prime_fragment	FALSE	canonical	3	97	junction_8	36.6090456338624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	8215	False	290456	-14	True	AATAAA	-18	NA	290432	270862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_117108.known	chr20	-	1420	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	45.912961132996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-22	True	NA	-14	True	AATAAA	-18	NA	290429	270862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_11711.known	chr1	+	3257	21	FSM	ENSG00000143093.15	ENST00000369795.8	3257	21	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_16	20.9482099473917	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGTTGGCTTGTCTACA	2	True	NA	8	True	ATTAAA	-16	NA	110034623	110054641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110034818_110037890_110037961_110038682_110038758_110039171_110039307_110039394_110039516_110040634_110040704_110041535_110041643_110041733_110041862_110043087_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679_110046752_110047541_110047617_110047771_110047870_110049111_110049239_110049459_110049561_110050342_110050410_110050955_110051061_110051682_110051888_110053664
transcript_117110.nic	chr20	-	2247	9	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	97	junction_7	38.2604152486614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	8215	False	290456	-14	True	AATAAA	-18	NA	290432	270862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_271268_275967_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_117121.known	chr20	-	1608	11	FSM	ENSG00000196476.12	ENST00000400269.4	1608	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	60.3867535143263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-35	True	NA	-14	True	AATAAA	-18	NA	290778	270862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290586
transcript_117122.known	chr20	+	2752	1	FSM	ENSG00000247315.4	ENST00000500893.4	2752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCACTATTTCCTTTC	-3	True	NA	37	True	AATAAA	-25	NA	297569	300321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_297600_300300
transcript_117125.known	chr20	+	2074	5	FSM	ENSG00000125841.13	ENST00000382285.7	2074	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	121.653195601266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACTTTGTTTCCTTTC	3	True	NA	24	True	AATAAA	-14	NA	347110	354862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_347143_347433_347513_349248_349364_349637_349833_353209
transcript_117127.known	chr20	+	2088	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	37.1872140511882	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTCTCCCTG	216	False	NA	30	True	AATAAA	-20	NA	347023	354868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_347143_349248_349364_349637_349833_353209
transcript_117129.nnic	chr20	+	2595	4	NNC	ENSG00000125841.13	novel	2074	5	NA	NA	312	0	intron_retention	FALSE	canonical	1	4	junction_1	121.58490403372	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACTTTGTTTCCTTTC	324	False	NA	24	True	AATAAA	-14	NA	347431	354862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_348064_349248_349364_349637_349833_353209
transcript_11713.nic	chr1	+	3502	20	NIC	ENSG00000143093.15	novel	3257	21	NA	NA	-26	0	intron_retention	TRUE	canonical	3	255	junction_9	19.003863144225	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCCGTTGGCTTGTCTA	3121	False	NA	6	True	ATTAAA	-14	NA	110034597	110054639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_110034818_110037890_110037961_110038682_110038758_110039171_110039307_110039394_110039516_110040634_110040704_110041535_110041643_110041733_110041862_110043087_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679_110046752_110047541_110047617_110047771_110047870_110049111_110049561_110050342_110050410_110050955_110051061_110051682_110051888_110053664
transcript_117130.known	chr20	+	846	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	70.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCATAACCCCCTCTC	75	False	NA	NA	False	NA	NA	NA	346882	353680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_347143_349248_349364_353209
transcript_117132.known	chr20	-	768	3	FSM	ENSG00000225377.6	ENST00000442637.2	768	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTGTTGGGAATTTG	264	False	NA	NA	False	NA	NA	NA	348224	320326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_320782_322377_322566_348099
transcript_117134.known	chr20	+	4673	1	FSM	ENSG00000177732.9	ENST00000342665.5	4673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCATTGTCTGTTT	1	True	NA	21	True	AATAAA	-17	NA	325551	330224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_325600_330200
transcript_117136.known	chr20	+	2356	4	FSM	ENSG00000101255.12	ENST00000217233.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	11.6714276000077	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	3	True	NA	NA	False	AATAAA	-18	NA	380759	397559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_381170_388010_388302_391286_391580_396197
transcript_117137.known	chr20	+	1070	4	FSM	ENSG00000101255.12	ENST00000449710.5	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	47.5417944783558	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCGCGGGGCCTACG	212	False	NA	NA	False	NA	NA	NA	381245	396428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_381501_388010_388302_391286_391580_396197
transcript_117144.known	chr20	+	3701	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	23.8788263343791	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCTTGGTAATGCC	-20	True	NA	16	True	ATTAAA	-28	NA	408298	432139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_117147.known	chr20	+	2599	11	FSM	ENSG00000125826.21	ENST00000640614.1	2599	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	24.416387939251	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATGAGTGTGATGTCC	-5	True	NA	6	True	ATTAAA	-14	NA	408064	430964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_117152.known	chr20	+	2208	10	FSM	ENSG00000125826.21	ENST00000382181.2	2208	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	31.2674642557988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	-6	True	NA	8	True	ATTAAA	-16	NA	408312	430966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_117153.known	chr20	-	4446	8	FSM	ENSG00000125875.15	ENST00000354200.5	4446	8	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_7	12.0169947684646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGTTCTGTGAG	-9	True	NA	-9	True	AATAAA	-14	NA	462533	435479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
transcript_117155.known	chr20	-	4483	8	FSM	ENSG00000125875.15	ENST00000681441.1	4483	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.7724772460091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAACATAAGTTTCCCT	20	True	NA	-21	True	AATAAA	-2	NA	462504	435491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_438842_439107_439296_440247_440390_441587_441690_441778_442044_445049_445131_447888_448075_462335
transcript_117158.known	chr20	-	4403	8	FSM	ENSG00000125875.15	ENST00000681777.1	4403	8	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_3	53.5906632135997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTGGTAAACATAAGTT	-15	True	NA	-26	True	NA	NA	NA	462539	435496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_438842_439107_439296_440247_440390_441619_441690_441856_442044_445049_445131_447888_448075_462335
transcript_117162.known	chr20	-	4234	7	FSM	ENSG00000125875.15	ENST00000681129.1	4234	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	55.3034557891478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAACATAAGTTTCCCT	5	True	NA	-21	True	AATAAA	-2	NA	462519	435491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_462335
transcript_117165.known	chr20	-	3820	7	FSM	ENSG00000125875.15	ENST00000494633.1	3820	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	12.1849178176228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTTCTGTCATTCCG	-19	True	NA	-4	True	AATAAA	-21	NA	462543	436282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_438842_439107_439296_440247_440390_441587_442044_445049_445131_447888_448075_462335
transcript_117168.known	chr20	+	1200	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	8	True	NA	20	True	AATAAA	-19	NA	408077	410764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_410411
transcript_117169.known	chr20	+	1024	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	-14	True	NA	20	True	AATAAA	-19	NA	408304	410764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409829_410026_410411
transcript_117171.known	chr20	+	790	2	FSM	ENSG00000125826.21	ENST00000400247.3	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	24	True	NA	20	True	AATAAA	-19	NA	408342	410764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_410411
transcript_117172.known	chr20	+	2752	12	FSM	ENSG00000125826.21	ENST00000382214.7	2752	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	33.3528592948265	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	-20	True	NA	8	True	ATTAAA	-16	NA	408049	430966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421007_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_117173.known	chr20	-	2024	10	FSM	ENSG00000125875.15	ENST00000461304.5	2024	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	66.8338644109314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGTTCTGTGAG	-7	True	NA	-9	True	AATAAA	-14	NA	462531	435479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_435971_437439_437599_438549_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
transcript_117174.known	chr20	-	2192	15	FSM	ENSG00000101266.19	ENST00000645623.1	2192	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	300.530356034061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTTGAGTTAGAAGTAAAA	5	True	NA	NA	False	NA	NA	NA	543738	473260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
transcript_117176.known	chr20	-	2822	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	201.651318958914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGAATATCTGTGTC	11	True	NA	-11	True	NA	NA	NA	543732	472507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_117177.known	chr20	-	12984	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	262.161858851905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	-6	True	NA	-1	True	NA	NA	NA	543790	472497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
transcript_117179.known	chr20	-	4290	14	FSM	ENSG00000101266.19	ENST00000645910.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	273.883229987962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTTTAATTTTTTTTAA	-16	True	NA	-79	True	ACTAAA	-34	NA	543759	481149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_508450_508661_543671
transcript_117183.known	chr20	-	12912	13	FSM	ENSG00000101266.19	ENST00000646561.1	12912	13	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_12	51.9917194261633	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	NA	False	NA	-1	True	NA	NA	NA	543835	472497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_117184.known	chr20	-	2319	13	FSM	ENSG00000101266.19	ENST00000644003.1	2319	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	326.345633067492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGGAGCAGAGCCACTA	8	True	NA	NA	False	NA	NA	NA	543735	482886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_543671
transcript_117189.known	chr20	-	4047	12	FSM	ENSG00000101266.19	ENST00000349736.10	4047	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	215.724495250863	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTGCAGCCTGAG	-8	True	NA	-39	True	AATAAA	-17	NA	543792	481109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_543671
transcript_117194.known	chr20	-	2545	12	FSM	ENSG00000101266.19	ENST00000642689.1	2545	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	218.778993356045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTATTTATCAAGGT	11	True	NA	17	True	AATAAA	-4	NA	543732	482710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499832_499935_505117_505230_508450_508661_543671
transcript_117197.known	chr20	-	2586	13	FSM	ENSG00000101266.19	ENST00000645234.1	2586	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213.779806238933	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGGTTTTATTTATCA	-1	True	NA	13	True	NA	NA	NA	543712	482714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484091_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_117198.known	chr20	-	2807	2	FSM	ENSG00000101266.19	ENST00000608490.2	2807	2	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGACTCCGTCTCAA	15	True	NA	NA	False	GGGGCT	-45	NA	543728	505910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_508661_543671
transcript_117199.known	chr20	-	2528	2	FSM	ENSG00000271303.2	ENST00000381962.4	2528	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGTGTGCAATTCCTT	-2	True	NA	-1	True	AATAAA	-26	NA	653200	646614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_648918_652975
transcript_117202.known	chr20	-	2654	6	FSM	ENSG00000101276.18	ENST00000217254.11	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	5.00399840127872	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	776015	760079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_761239_761700_761825_763497_764004_765207_765826_768296_768483_775954
transcript_117204.nic	chr20	-	3213	6	NIC	ENSG00000101276.18	novel	2654	6	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	7.41350119714026	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	776065	760079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_761239_761700_761825_763497_764004_765207_766335_768296_768483_775954
transcript_117206.nic	chr20	-	3086	5	NIC	ENSG00000101276.18	novel	2654	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_4	2.8613807855649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	-3	True	NA	-7	True	AATAAA	-18	NA	775985	760079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_761825_763497_764004_765207_765826_768296_768483_775954
transcript_117207.nic	chr20	-	3675	5	NIC	ENSG00000101276.18	novel	2654	6	NA	NA	-50	0	intron_retention	FALSE	canonical	3	15	junction_3	5.67890834580027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	776065	760079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_761825_763497_764004_765207_766335_768296_768483_775954
transcript_117208.known	chr20	-	911	3	FSM	ENSG00000101276.18	ENST00000674666.1	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCATCCAGCTGGCCA	-3	True	NA	NA	False	NA	NA	NA	775985	765640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_766335_768296_768483_775954
transcript_117209.known	chr20	+	1737	2	FSM	ENSG00000125898.13	ENST00000381939.1	1737	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCTTCAGACTCTTC	12	True	NA	30	True	AATAAA	-23	NA	833783	846279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_833952_844710
transcript_117211.known	chr20	+	1614	2	FSM	ENSG00000125898.13	ENST00000541082.2	1614	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCTTCAGACTCTTC	9	True	NA	30	True	AATAAA	-23	NA	841274	846279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_841317_844707
transcript_117213.nnic	chr20	+	2617	2	NNC	ENSG00000125898.13	novel	1614	2	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGCCTTCAGACTCT	5038	False	NA	28	True	AATAAA	-21	NA	841092	846277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_842140_844707
transcript_117214.known	chr20	-	2757	5	FSM	ENSG00000101282.9	ENST00000217260.9	2757	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	10.0249688278817	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTGAGCATCAAGAG	9	True	NA	-5	True	AATAAA	-20	NA	1002311	958451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_960467_963934_964121_967173_967315_967949_968139_1002085
transcript_117218.known	chr20	+	8154	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_3	36.3581719379106	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	-30	True	NA	NA	False	ATTAAA	-23	NA	1118601	1172246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
transcript_117220.known	chr20	+	2042	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	221.234415646993	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	-34	True	NA	22	True	AATAAA	-24	NA	1118597	1167328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
transcript_117233.known	chr20	-	582	2	FSM	ENSG00000125895.6	ENST00000481747.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCCGTGAGCCGCCCGG	497	False	NA	NA	False	NA	NA	NA	1185415	1181283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1181588_1185137
transcript_117235.known	chr20	+	2853	6	FSM	ENSG00000101298.15	ENST00000649598.1	2853	6	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_3	5.27636238330917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTCGGGCCCAACTTC	-28	True	NA	NA	False	NA	NA	NA	1266279	1307051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1266398_1266653_1266761_1296324_1296422_1297045_1297253_1300561_1300712_1304877
transcript_117237.known	chr20	+	4995	6	FSM	ENSG00000101298.15	ENST00000381873.7	4995	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.22710574513201	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTGGCCTGTTTTCTTT	8	True	NA	14	True	ATTAAA	-19	NA	1266315	1309328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1266398_1266653_1266761_1296324_1296422_1297144_1297253_1300561_1300712_1304877
transcript_117244.known	chr20	-	1082	6	FSM	ENSG00000088832.18	ENST00000381724.8	1082	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1527.53697172933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTTGCCTCCACCATT	3	True	NA	NA	False	ATTAAA	-33	NA	1393052	1369533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1371021_1371148_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_117245.known	chr20	-	1591	6	FSM	ENSG00000088832.18	ENST00000678136.1	1591	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1517.68705601649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCTGTGTCATGGT	1	True	NA	-15	True	AATAAA	-20	NA	1393054	1368982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1377429_1377512_1392833_1392882_1392961
transcript_117247.nnic	chr20	-	910	6	NNC	ENSG00000088832.18	novel	1573	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1261.80971624092	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTCTGTGTCATGGTGG	NA	False	NA	-13	True	AATAAA	-22	NA	1393180	1368980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_1369040_1369766_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_117249.known	chr20	-	1573	6	FSM	ENSG00000088832.18	ENST00000677335.1	1573	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1528.02206790347	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCAGCTCTGTGTCATG	14	True	NA	-17	True	AATAAA	-18	NA	1393092	1368984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1371119_1371148_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_117250.known	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	4.60298815988049	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	18	False	NA	NA	False	AATAAA	-20	NA	1313639	1309974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
transcript_117253.known	chr20	-	1514	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_4	275.022726333661	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	1	True	NA	-10	True	AATAAA	-25	NA	1393054	1368977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_117255.known	chr20	-	1520	4	FSM	ENSG00000088832.18	ENST00000439640.5	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1535.41315467712	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-2	True	NA	-10	True	AATAAA	-25	NA	1393108	1368977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392961
transcript_117256.known	chr20	-	1452	4	FSM	ENSG00000088832.18	ENST00000618612.5	1452	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	1279.05772608849	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	1	True	NA	-10	True	AATAAA	-25	NA	1393105	1368977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1392833_1392882_1392961
transcript_117257.known	chr20	-	3564	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_3	317.058354250444	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTATGCCGGCTTTTCT	-17	True	NA	-32	True	AATAAA	-3	NA	1393123	1368999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
transcript_117261.known	chr20	-	1579	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	3121	junction_1	127.917508140555	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGTGGTTAT	-5	True	NA	-9	True	AATAAA	-26	NA	1393038	1368976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
transcript_117265.known	chr20	-	2800	10	FSM	ENSG00000088833.18	ENST00000476071.5	2800	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	419.087220952193	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-8	True	NA	0	True	ATTAAA	-22	NA	1466918	1442161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1455713_1455720_1458199_1458275_1464328_1464427_1466719
transcript_117276.known	chr20	-	2721	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_6	98.8316118456033	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-10	True	NA	-4	True	ATTAAA	-18	NA	1466849	1442165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_117278.known	chr20	-	1446	9	FSM	ENSG00000088833.18	ENST00000381653.9	1446	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	350.244535110828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCCCTCCTGTGT	15	True	NA	NA	False	NA	NA	NA	1466824	1443734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1446150_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_117289.known	chr20	-	2611	8	FSM	ENSG00000088833.18	ENST00000353088.6	2611	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	367.55557680549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	11	True	NA	0	True	ATTAAA	-22	NA	1466828	1442161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_117294.known	chr20	-	624	2	FSM	ENSG00000088833.18	ENST00000478168.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCACCCTTTGCCAAGT	17	True	NA	NA	False	AATAAA	-7	NA	1466822	1463905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1464427_1466719
transcript_117295.known	chr20	+	4570	9	FSM	ENSG00000198053.12	ENST00000622179.4	4570	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	13.869368226419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTGGTTACTATGTG	27	False	NA	NA	False	AATAAA	-22	NA	1894507	1940592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1894518_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934767_1937319
transcript_117299.known	chr20	+	4580	8	FSM	ENSG00000198053.12	ENST00000358771.5	4580	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.9045976991969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTGGTTACTATGTG	10	True	NA	NA	False	AATAAA	-22	NA	1895406	1940592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
transcript_117303.known	chr20	-	2556	4	FSM	ENSG00000101327.9	ENST00000217305.3	2556	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGGTGGGTGTGTGTG	-2	True	NA	-2	True	AATAAA	-18	NA	1994058	1978758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1980959_1982955_1983104_1992583_1992644_1993910
transcript_117305.known	chr20	+	6469	4	FSM	ENSG00000125834.13	ENST00000381482.8	6469	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	48.5615302705982	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	3	True	NA	57	True	AATAAA	-43	NA	2101826	2148555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2102176_2102767_2103366_2116665_2117416_2143783
transcript_117310.nic	chr20	+	6246	3	ISM	ENSG00000125834.13	ENST00000381482.8	6469	4	815	0	-249	0	3prime_fragment	FALSE	canonical	3	129	junction_2	1	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	-9	True	NA	57	True	AATAAA	-43	NA	2102641	2148555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2103366_2116665_2117416_2143783
transcript_117311.nic	chr20	+	2654	2	ISM	ENSG00000125834.13	ENST00000381482.8	6469	4	815	29960	-249	-29960	internal_fragment	FALSE	canonical	3	131	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGAGTTTTCCTTT	-9	True	NA	NA	False	NA	NA	NA	2102641	2118595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2103366_2116665
transcript_117312.known	chr20	+	536	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	NA	False	NA	5	True	ATTAAA	-14	NA	2207226	2213151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2207520_2212908
transcript_117313.known	chr20	+	2643	13	FSM	ENSG00000125780.12	ENST00000381458.6	2643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.897527467855751	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGACTCTACCTGACTG	-1	True	NA	6	True	AATAAA	-24	NA	2296000	2341079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2296071_2309656_2309831_2310177_2310418_2311010_2311130_2312897_2313027_2317067_2317246_2317349_2317486_2325848_2325953_2328119_2328366_2332001_2332311_2335115_2335274_2339853_2339988_2340433
transcript_117316.known	chr20	-	985	8	FSM	ENSG00000125835.20	ENST00000474384.2	985	8	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	2220.23251218499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTTAAGAGAACATTATA	88	False	NA	NA	False	NA	NA	NA	2470732	2461659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467191_2467316_2467606_2467759_2470687
transcript_11732.known	chr1	+	4216	1	FSM	ENSG00000258634.3	ENST00000554749.1	4216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCTTTCCAGGGATAT	8892	False	NA	NA	False	AATAAA	-19	NA	110058339	110062555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110058300_110062600
transcript_117321.known	chr20	-	1008	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	1756	junction_1	1201.42869812015	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGATCTTTATTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	2470853	2461633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_117325.known	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3152	junction_1	710.912422329377	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-10	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_117332.known	chr20	-	3415	6	FSM	ENSG00000088876.13	ENST00000278772.9	3415	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	4.95580467734555	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAACTTGTTTTATTTT	1	True	NA	NA	False	AATAAA	-31	NA	2508915	2481816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2484657_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_11734.known	chr1	+	18750	4	FSM	ENSG00000116396.15	ENST00000369787.7	18750	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGCCAACTACATCACT	-10	True	NA	NA	False	NA	NA	NA	110211472	110249124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232220
transcript_11735.known	chr1	+	3284	3	FSM	ENSG00000162775.17	ENST00000617047.1	3284	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	9.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	-5	True	NA	24	True	AATAAA	-20	NA	110339465	110346677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110342269_110345538_110345650_110346307
transcript_11736.nnic	chr1	-	1017	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	-4	-22772	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGTTCAGAATTGCAT	776	False	NA	-12	True	ATTAAA	-14	NA	110339175	110315031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_110315752_110318764_110318883_110338996
transcript_117367.nic	chr20	+	2499	12	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	-25	-320	-25	0	intron_retention	FALSE	canonical	3	147	junction_11	199.715748415815	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTTCCCCAATAAAA	NA	False	NA	-20	True	NA	NA	NA	2652567	2658359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657372
transcript_117369.known	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	184.132587874486	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	-1	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_11737.known	chr1	+	3214	2	FSM	ENSG00000162775.17	ENST00000654015.1	3214	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	-11	True	NA	24	True	AATAAA	-20	NA	110339424	110346677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110342269_110346307
transcript_117373.nic	chr20	+	2679	12	NIC	ENSG00000101361.17	novel	1768	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	147	junction_11	203.081712170697	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTTCCCCAATAAAA	NA	False	NA	-20	True	NA	NA	NA	2652567	2658359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372
transcript_117374.nic	chr20	+	2157	12	NIC	ENSG00000101361.17	novel	1913	12	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	355	junction_1	189.942226971195	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	NA	False	NA	14	True	AATAAA	-16	NA	2652567	2658393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_117385.nic	chr20	+	1449	11	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	-25	884	-25	-63	5prime_fragment	FALSE	canonical	3	355	junction_1	162.440265944131	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGGCTGCACTTGCCCT	NA	False	NA	-58	True	AAGAAA	-22	NA	2652567	2657155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080
transcript_117386.nic	chr20	+	1512	11	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	-25	821	-25	0	5prime_fragment	FALSE	canonical	3	355	junction_1	162.440265944131	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTAGGCAGCACGGCCC	NA	False	NA	5	True	AAAACA	-27	NA	2652567	2657218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080
transcript_117389.nic	chr20	+	1628	11	NIC	ENSG00000101361.17	novel	1913	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	355	junction_1	168.454771377958	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTAGGCAGCACGGCCC	-1	True	NA	5	True	AAAACA	-27	NA	2652631	2657218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080
transcript_11740.known	chr1	-	694	5	FSM	ENSG00000134248.14	ENST00000483260.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	1127.42372247527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	2	True	NA	-27	True	AATAAA	-21	NA	110407668	110401248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032_110407129_110407585
transcript_11742.known	chr1	-	1154	4	FSM	ENSG00000134248.14	ENST00000474861.6	1154	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	1050.92477794031	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-1	True	NA	-27	True	AATAAA	-21	NA	110407671	110401248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032
transcript_11743.known	chr1	-	620	4	FSM	ENSG00000134248.14	ENST00000602318.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_3	108.81891175506	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTTCTAGATTCTT	-24	True	NA	-31	True	AATAAA	-17	NA	110407694	110401252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407585
transcript_11745.known	chr1	-	1962	7	FSM	ENSG00000168679.18	ENST00000461647.6	1962	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.92973263854116	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTAAAAACTTCTTTA	-4	True	NA	NA	False	AATAAA	-14	NA	110391061	110362859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110363894_110375457_110375552_110376949_110377162_110380981_110381144_110381651_110381796_110389236_110389356_110390864
transcript_11746.known	chr1	+	1569	9	FSM	ENSG00000143119.14	ENST00000648608.1	1569	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.11763429326218	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACATTGCTATATATC	-7	True	NA	17	True	AATAAA	-20	NA	110871187	110899922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110871260_110873155_110873249_110891391_110891472_110892344_110892534_110894326_110894402_110894959_110895056_110896652_110896734_110897808_110897893_110899123
transcript_11747.known	chr1	-	3313	4	FSM	ENSG00000121931.16	ENST00000369763.5	3313	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	15.4560308258262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-9	True	NA	-16	True	NA	NA	NA	110963922	110947189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110948400_110949850_110950124_110951287_110952816_110963620
transcript_11749.known	chr1	-	1796	3	FSM	ENSG00000121931.16	ENST00000485275.2	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	17.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAATATTTCTTAAAC	-10	True	NA	-48	True	AAAAAG	-20	NA	110963965	110947221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110948400_110949850_110950124_110963620
transcript_117506.known	chr20	+	663	3	FSM	ENSG00000101361.17	ENST00000470143.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	86	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTATTTTTGGTAGA	0	True	NA	NA	False	NA	NA	NA	2652632	2653820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2652664_2652841_2652932_2653278
transcript_117507.known	chr20	+	1628	6	FSM	ENSG00000101361.17	ENST00000415272.2	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_5	276.398697536729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTTCCCCAATAAAA	1401	False	NA	-20	True	NA	NA	NA	2655615	2658359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657372
transcript_117508.known	chr20	+	1094	6	FSM	ENSG00000101361.17	ENST00000466447.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	357.072205583128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	10	False	NA	14	True	AATAAA	-16	NA	2656110	2658393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
transcript_117513.known	chr20	-	1279	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	222.971597593356	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	16	True	NA	-6	True	AATAAA	-14	NA	2664189	2658394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_117518.known	chr20	-	1230	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	185.810487298437	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-14	True	NA	-6	True	AATAAA	-14	NA	2664219	2658394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_117521.known	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	73.2316600457606	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-11	True	NA	-6	True	AATAAA	-14	NA	2664216	2658394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_11754.nic	chr1	-	631	2	ISM	ENSG00000121931.16	ENST00000485275.2	1796	3	-13	2629	-13	-2629	5prime_fragment	FALSE	canonical	3	71	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAATACATTTTAATG	NA	False	NA	0	True	AAAACA	-2	NA	110963978	110949850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_110950124_110963620
transcript_11755.known	chr1	+	1348	1	FSM	ENSG00000273010.1	ENST00000609118.1	1348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTTGATGCTCTTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	110963301	110964649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110963300_110964600
transcript_117577.known	chr20	-	823	5	FSM	ENSG00000101365.21	ENST00000491065.1	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_4	56.2466665678954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGGGGCGGGGCAAGG	-4	True	NA	NA	False	NA	NA	NA	2664209	2660504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_117579.known	chr20	+	1647	3	FSM	ENSG00000088881.21	ENST00000477287.1	1647	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGAGTTTGCTTTTCTT	NA	False	NA	25	True	AATAAA	-44	NA	2755087	2760101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2755825_2758908_2758985_2759267
transcript_11758.known	chr1	-	2098	10	FSM	ENSG00000156171.15	ENST00000484310.6	2098	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	41.5392124725482	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGCATCTACAAAAACAGT	-5	True	NA	-11	True	ATTAAA	-24	NA	111140093	111117162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_117581.known	chr20	-	2376	14	FSM	ENSG00000088882.8	ENST00000380605.3	2376	14	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_6	44.4608730320181	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATCTTCGTGTTGTCTC	-11	True	NA	-7	True	ATTAAA	-17	NA	2800627	2794073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2794432_2794536_2794640_2795276_2795417_2795598_2795897_2795981_2796162_2796246_2796444_2796526_2796651_2797005_2797095_2797191_2797343_2797967_2798059_2798151_2798292_2798427_2798538_2798725_2798894_2800400
transcript_11759.nic	chr1	-	2031	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_9	56.334319517995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	8	True	NA	-8	True	AATAAA	-13	NA	111140151	111117332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_117623.known	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_19	16.0749661543035	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_117630.nic	chr20	+	2856	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	-10	0	intron_retention	FALSE	canonical	3	128	junction_18	15.4930669645149	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	NA	False	NA	22	True	AATAAA	-15	NA	2840692	2866732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_117632.nnic	chr20	+	2628	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	34.961401384625	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	NA	False	NA	22	True	AATAAA	-15	NA	2840692	2866732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_11764.nic	chr1	-	1454	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	52	214	combination_of_known_junctions	FALSE	canonical	3	74	junction_9	56.334319517995	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATCATAGTTTTTTATA	8	True	NA	-24	True	AATAAA	-13	NA	111140151	111117909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_117645.known	chr20	+	2318	20	FSM	ENSG00000215305.10	ENST00000380469.7	2318	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	38.5056027149714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	-4	True	NA	22	True	AATAAA	-15	NA	2840702	2866732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_117651.nic	chr20	-	1879	8	NIC	ENSG00000132635.17	novel	1979	8	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	17.2543990250106	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	430	False	NA	0	True	AATAAA	-25	NA	2840708	2835313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2838930_2839191_2839272_2839788_2839934_2840210
transcript_117654.nnic	chr20	-	1987	8	NNC	ENSG00000132635.17	novel	1979	8	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.3249118280087	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	430	False	NA	0	True	AATAAA	-25	NA	2840708	2835313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839038_2839191_2839272_2839788_2839934_2840210
transcript_117655.known	chr20	-	1979	8	FSM	ENSG00000132635.17	ENST00000360652.7	1979	8	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	11.4873488531284	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	6	True	NA	0	True	AATAAA	-25	NA	2840655	2835313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
transcript_117659.nic	chr20	-	2141	7	NIC	ENSG00000132635.17	novel	1979	8	NA	NA	-37	0	intron_retention	FALSE	canonical	2	27	junction_3	12.1746549118331	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	430	False	NA	0	True	AATAAA	-25	NA	2840708	2835313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839272_2839788_2839934_2840210
transcript_117663.nic	chr20	-	1756	7	NIC	ENSG00000132635.17	novel	1979	8	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	15.5608126037456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	430	False	NA	0	True	AATAAA	-25	NA	2840708	2835313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2835710_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
transcript_117667.known	chr20	+	3353	24	FSM	ENSG00000132670.21	ENST00000399903.7	3353	24	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	134.968469327712	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	-48	True	NA	16	True	AATAAA	-17	NA	2873480	3038669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2975214_2975242_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_117668.known	chr20	+	3725	23	FSM	ENSG00000132670.21	ENST00000216877.10	3725	23	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_11	58.9125279580941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGAATTGTTCCCAT	-40	True	NA	NA	False	GATAAA	-19	NA	2873488	3039076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_117672.nnic	chr20	+	3331	23	NIC	ENSG00000132670.21	novel	3353	24	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	152.166367196517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	-69	True	NA	16	True	AATAAA	-17	NA	2873459	3038669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2873761_2923206_2923286_2964271_2964351_2964860_2965203_2975214_2975242_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_11768.known	chr1	+	2203	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	16.8281757775464	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGATGTGTCTTGTG	-10	True	NA	11	True	AATAAA	-23	NA	111140222	111185104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_117690.known	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_3	86.7653284568336	1262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	-8	True	NA	31	True	AATAAA	-17	NA	3046051	3048250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
transcript_117703.known	chr20	-	4300	5	FSM	ENSG00000185019.17	ENST00000217173.7	4300	5	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	27.6676706645138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	5	True	NA	-4	True	AATAAA	-17	NA	3159865	3107572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3110315_3115304_3115467_3121383_3122585_3123311_3123407_3159765
transcript_117706.known	chr20	-	4469	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.1058061754523	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	8107	False	NA	-4	True	AATAAA	-17	NA	3160196	3107572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
transcript_117710.known	chr20	-	2842	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTTGGATTTTTCTT	5	True	NA	0	True	AATAAA	-29	NA	3159865	3146518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3149261_3159765
transcript_117711.known	chr20	-	4055	6	FSM	ENSG00000088899.16	ENST00000360342.7	4055	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	111.075829954135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	5	True	NA	-2	True	AATAAA	-25	NA	3173546	3162616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3165153_3165496_3165629_3165766_3166361_3166704_3167182_3167737_3167962_3173454
transcript_117719.known	chr20	-	4196	5	FSM	ENSG00000088899.16	ENST00000337576.7	4196	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	95.6896023609671	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	2	True	NA	-2	True	AATAAA	-25	NA	3173549	3162616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3165153_3165496_3166361_3166704_3167182_3167737_3167962_3173454
transcript_117721.nnic	chr20	-	4230	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-73	0	intron_retention	FALSE	canonical	3	21	junction_3	112.256402935423	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	NA	False	NA	-2	True	AATAAA	-25	NA	3173622	3162616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167776_3167962_3173454
transcript_117723.nnic	chr20	-	4208	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-73	0	intron_retention	FALSE	canonical	0	0	junction_3	119.499738493438	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	NA	False	NA	-2	True	AATAAA	-25	NA	3173622	3162616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167798_3167962_3173454
transcript_117727.nnic	chr20	-	4135	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-73	-10	intron_retention	FALSE	canonical	0	0	junction_3	107.952246387002	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGGTATTCTTTGGCC	NA	False	NA	-12	True	AATAAA	-15	NA	3173622	3162626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165559_3166361_3166704_3167182_3167798_3167962_3173454
transcript_117737.nnic	chr20	-	4061	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-73	-147	intron_retention	FALSE	canonical	0	0	junction_3	119.499738493438	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACAGACTCAGCTTTG	NA	False	NA	NA	False	AATAGA	-7	NA	3173622	3162763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167798_3167962_3173454
transcript_117740.nnic	chr20	-	4213	4	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	235	0	intron_retention	FALSE	canonical	3	44	junction_3	111.816317632486	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	5286	False	NA	-2	True	AATAAA	-25	NA	3168326	3162616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167990
transcript_117741.nnic	chr20	-	4036	4	NIC	ENSG00000088899.16	novel	4196	5	NA	NA	-64	0	intron_retention	FALSE	canonical	3	24	junction_3	121.218810421485	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-1	True	NA	-2	True	AATAAA	-25	NA	3173613	3162616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3165153_3165496_3166361_3166704_3167182_3173454
transcript_117746.nnic	chr20	-	4220	4	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	81	-147	intron_retention	FALSE	canonical	3	44	junction_3	111.816317632486	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACAGACTCAGCTTTG	5132	False	NA	NA	False	AATAGA	-7	NA	3168480	3162763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167990
transcript_117747.nnic	chr20	-	3889	4	NIC	ENSG00000088899.16	novel	4196	5	NA	NA	-64	-147	intron_retention	FALSE	canonical	3	24	junction_3	121.218810421485	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACAGACTCAGCTTTG	-1	True	NA	NA	False	AATAGA	-7	NA	3173613	3162763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3165153_3165496_3166361_3166704_3167182_3173454
transcript_11775.nic	chr1	-	1224	9	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	-11	214	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	79.5455844154784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATCATAGTTTTTTATA	-18	True	NA	-24	True	AATAAA	-13	NA	111140106	111117909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_117750.nnic	chr20	-	2077	9	NNC	ENSG00000198171.13	novel	1303	9	NA	NA	263	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_8	139.08270920571	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	5015	False	NA	0	True	AAGAAA	-20	NA	3204419	3190349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3203499
transcript_117751.known	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	2	307	junction_6	51.2219435398541	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-17	True	NA	0	True	AAGAAA	-20	NA	3204682	3190349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_117755.nnic	chr20	-	1904	9	NNC	ENSG00000198171.13	novel	1303	9	NA	NA	263	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_8	139.08270920571	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTTGGTGTGGCTTGGT	5015	False	NA	-3	True	ATTAAA	-17	NA	3204419	3190522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3203499
transcript_11776.known	chr1	-	769	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	94.0816666519041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-2	True	NA	NA	False	AATAAA	-25	NA	111140090	111125377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_117762.known	chr20	-	1128	7	FSM	ENSG00000198171.13	ENST00000380201.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	2	307	junction_4	51.5355864104278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCAGGGCCCAGGACCA	-20	True	NA	NA	False	NA	NA	NA	3204685	3191423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_117776.known	chr20	+	1037	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	91.8079183815373	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	-3	True	NA	21	True	AATAAA	-21	NA	3209497	3223860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_117777.known	chr20	+	729	8	FSM	ENSG00000125877.13	ENST00000455664.6	729	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	276.856332005299	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCTCTGAGAAACTC	12	True	NA	NA	False	NA	NA	NA	3209512	3223618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209567_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_11778.known	chr1	-	1894	12	FSM	ENSG00000162777.17	ENST00000369752.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.70560573084488	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGGCTTTTAC	137	False	NA	0	True	AGTAAA	-20	NA	111204409	111187173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111187682_111188130_111188371_111188701_111188787_111189211_111189254_111192139_111192318_111194577_111194727_111195915_111196057_111197175_111197254_111197919_111197990_111198629_111198743_111199622_111199799_111204295
transcript_117780.known	chr20	+	1028	7	FSM	ENSG00000125877.13	ENST00000483354.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	393.093182337216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	192	False	NA	31	True	AATAAA	-31	NA	3208867	3223870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209034_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_117789.known	chr20	+	967	7	FSM	ENSG00000125877.13	ENST00000460550.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	306.52768589839	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	12	True	NA	31	True	AATAAA	-31	NA	3209512	3223870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209618_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_11779.known	chr1	+	2293	6	FSM	ENSG00000173947.14	ENST00000369738.9	2293	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	3.2	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	3	True	NA	NA	False	AATAAA	-18	NA	111346621	111353013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111348647_111350105_111350224_111351258
transcript_117790.known	chr20	+	977	7	FSM	ENSG00000125877.13	ENST00000490838.6	977	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	309.358700468494	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	-12	True	NA	31	True	AATAAA	-31	NA	3209488	3223870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209536_3213257_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_117795.known	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	308.191239330387	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	24	True	NA	31	True	AATAAA	-31	NA	3209524	3223870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_117811.nic	chr20	-	3343	20	NIC	ENSG00000088836.14	novel	3046	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	28.097672935258	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	-1	True	NA	-11	True	AATAAA	-17	NA	3239559	3227421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231477_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_117812.known	chr20	-	3229	20	FSM	ENSG00000088836.14	ENST00000380059.7	3229	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_19	25.4446332824996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	1392	False	NA	-6	True	AATAAA	-22	NA	3238166	3227416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3237892
transcript_117814.known	chr20	-	3046	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_19	18.8637041744207	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	14	True	NA	-11	True	AATAAA	-17	NA	3239190	3227421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_117835.known	chr20	-	2915	19	FSM	ENSG00000088836.14	ENST00000647296.1	2915	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	29.3546324188269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTGTTTCTAGGCTCC	14	True	NA	-28	True	NA	NA	NA	3239190	3227438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_117848.known	chr20	-	6912	37	FSM	ENSG00000088854.13	ENST00000252032.10	6912	37	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	4.77616251765596	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCCTCCAGACGATGC	-36	True	NA	-11	True	AATAAA	-15	NA	3407669	3249305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3252685_3253725_3253820_3255218_3255285_3256005_3256212_3259479_3259555_3259921_3260029_3264437_3264525_3270426_3270563_3278911_3278950_3281640_3281767_3287631_3287791_3290128_3290218_3294138_3294257_3294527_3294630_3296860_3296950_3298028_3298176_3304439_3304544_3315032_3315121_3315734_3315786_3316722_3316794_3318288_3318401_3322216_3322263_3322651_3322697_3324891_3324969_3326196_3326285_3330645_3330683_3332279_3332362_3340503_3340640_3343675_3343732_3348524_3348624_3359515_3359594_3374047_3374155_3375029_3375127_3376177_3376303_3381378_3381499_3382426_3382507_3407474
transcript_117849.known	chr20	+	8651	29	FSM	ENSG00000088812.18	ENST00000262919.10	8651	29	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_28	20.4414295198826	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTTGTTCTGAGTG	-25	True	NA	17	True	AATAAA	-18	NA	3471017	3651118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3471518_3535252_3535337_3540221_3540336_3545761_3545891_3547283_3547490_3549169_3549339_3559392_3559484_3560661_3560906_3562275_3562460_3563208_3563364_3565347_3565433_3572730_3572952_3575826_3575949_3576858_3576998_3578581_3578773_3582134_3582355_3583897_3584084_3584646_3584881_3591168_3591307_3594478_3594573_3596376_3596430_3597905_3598001_3600945_3601025_3604104_3604263_3624510_3624573_3634310_3634390_3638827_3638936_3644153_3644269_3646722
transcript_117851.known	chr20	+	3921	25	FSM	ENSG00000088812.18	ENST00000446916.2	3921	25	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	13.1811629060396	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGTTAATGGGTGCAGCA	17	False	NA	NA	False	NA	NA	NA	3471107	3615947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3471518_3535252_3535337_3540221_3540336_3545761_3545891_3547283_3547490_3549169_3549339_3559392_3559484_3560661_3560906_3562275_3562460_3563208_3563364_3565347_3565433_3572730_3572952_3575826_3575949_3576858_3576998_3578581_3578773_3582134_3582355_3583897_3584084_3584646_3584881_3591168_3591307_3594478_3594573_3596376_3596430_3597905_3598001_3600945_3601025_3604104_3604263_3615827
transcript_117871.known	chr20	+	3133	13	FSM	ENSG00000132622.11	ENST00000254963.7	3133	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	5.53524063513854	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCTGCTGATATGG	-13	True	NA	13	True	AATAAA	-21	NA	3732684	3753111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3732795_3738657_3738718_3740814_3740913_3742283_3742409_3744901_3745089_3745492_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803_3750908_3751510
transcript_117876.known	chr20	+	3009	12	FSM	ENSG00000132622.11	ENST00000399701.1	3009	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	9.62091385841669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCTGCTGATATGG	13	True	NA	13	True	AATAAA	-21	NA	3732710	3753111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3732795_3738657_3738718_3742283_3742409_3744901_3745089_3745492_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803_3750908_3751510
transcript_117886.known	chr20	-	1302	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	469.044731342332	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	10	True	NA	-4	True	AATAAA	-19	NA	3767728	3753507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
transcript_117887.known	chr20	-	1734	6	FSM	ENSG00000101220.18	ENST00000399672.5	1734	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	471.299225545725	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	605	False	NA	-4	True	AATAAA	-19	NA	3767781	3753507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767208
transcript_117888.known	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	42.3065006825192	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-15	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
transcript_11789.nic	chr1	-	2212	11	NIC	ENSG00000116455.14	novel	2456	10	NA	NA	-36	-386	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	256.528380496194	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTGTCTTTTTTGAAG	-1	True	NA	-21	True	AATAAA	-15	NA	111449292	111440275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111441390_111441498_111441605_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_117898.nic	chr20	-	2489	4	NIC	ENSG00000101220.18	novel	1252	6	NA	NA	-22	0	intron_retention	FALSE	canonical	3	1154	junction_2	41.2148840428633	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	583	False	NA	-4	True	AATAAA	-19	NA	3767803	3753507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3755608_3758535_3758679_3760081_3760187_3767662
transcript_117900.known	chr20	-	1580	7	FSM	ENSG00000101222.12	ENST00000379756.3	1580	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	1.38443731048635	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGCCTGCCTTCTC	-2	True	NA	NA	False	ATTAAA	-18	NA	3781448	3777503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3778320_3778420_3778545_3778745_3778807_3778950_3778991_3779195_3779353_3779663_3779776_3781178
transcript_117904.known	chr20	-	2890	1	FSM	ENSG00000125817.8	ENST00000379751.5	2890	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCATCCTTCATGGTCT	-4	True	NA	-10	True	AATAAA	-45	NA	3786740	3783850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3783800_3786700
transcript_117905.known	chr20	+	1960	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	21.0664556951461	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTTTCCTTGTTA	-53	True	NA	24	True	NA	NA	NA	3795738	3805237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_117906.nnic	chr20	+	2802	16	NIC	ENSG00000101224.18	novel	1960	16	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	26.6024226131548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	-59	True	NA	30	True	AATAAA	-21	NA	3795732	3806115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_3795880_3797663_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_117907.known	chr20	+	3119	16	FSM	ENSG00000101224.18	ENST00000245960.10	3119	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	16.6925132918923	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	6	True	NA	30	True	AATAAA	-21	NA	3796309	3806115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_117908.known	chr20	+	3096	16	FSM	ENSG00000101224.18	ENST00000439880.6	3096	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	26.3678255118283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	-13	True	NA	30	True	AATAAA	-21	NA	3796290	3806115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3796732_3797663_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_117910.known	chr20	+	1978	15	FSM	ENSG00000101224.18	ENST00000340833.4	1978	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	30.3776401388943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTGTCCTCCAGGA	0	True	NA	5	True	NA	NA	NA	3796430	3805218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_117911.nnic	chr20	+	2817	14	NNC	ENSG00000101224.18	novel	807	9	NA	NA	-1425	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	24.5467793956402	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3169	False	NA	30	True	AATAAA	-21	NA	3799645	3806115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_3799946_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_117916.known	chr20	+	5372	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACAGGTTTTTGTG	8	True	NA	NA	False	AATACA	-14	NA	3820546	3828838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3820759_3822101_3822294_3823870
transcript_11792.nic	chr1	-	1519	11	NIC	ENSG00000116455.14	novel	2456	10	NA	NA	-19	276	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	256.528380496194	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTCCCTAAGCACTGCC	16	False	NA	-13	True	AATAAA	-15	NA	111449275	111440951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111441390_111441498_111441605_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_117920.known	chr20	+	1791	3	FSM	ENSG00000125843.11	ENST00000379567.6	1791	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCTGTGAGTTTGA	-3	True	NA	30	True	ATTAAA	-22	NA	3820535	3825302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3820703_3822101_3822294_3823870
transcript_117922.known	chr20	+	584	3	FSM	ENSG00000125843.11	ENST00000455742.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCTGCACGAGGCCC	8	True	NA	NA	False	NA	NA	NA	3820546	3823954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3820855_3822101_3822294_3823870
transcript_117929.nnic	chr20	+	4038	8	NNC	ENSG00000088888.18	novel	11731	7	NA	NA	-7	-5459	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	29.407759631271	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCT	-23	True	NA	NA	False	NA	NA	NA	3846826	3870659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682_3867483_3869723
transcript_117933.nnic	chr20	+	5180	8	NNC	ENSG00000088888.18	novel	11731	7	NA	NA	-7	-5455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	29.407759631271	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCTAGGA	-23	True	NA	NA	False	NA	NA	NA	3846826	3870663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682_3868348_3869450
transcript_117938.known	chr20	+	11731	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	9.92331709773613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	-16	True	NA	11	True	AATAAA	-23	NA	3846833	3876118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_11795.known	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_1	51.3679536935886	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-11	True	NA	1	True	AGTAAA	-16	NA	111449256	111439889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_117952.known	chr20	+	11596	6	FSM	ENSG00000088888.18	ENST00000416600.6	11596	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	28.6956442687736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAATGGTCTACAATGG	NA	False	NA	16	True	AATAAA	-28	NA	3846798	3876123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3846904_3854557_3854742_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_117978.known	chr20	+	4815	7	FSM	ENSG00000125779.24	ENST00000497424.5	4815	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	121.079404616236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCGCTATTTCAGGTCA	56	False	NA	NA	False	NA	NA	NA	3888838	3926958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3888905_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_117980.known	chr20	+	1843	7	FSM	ENSG00000125779.24	ENST00000336066.8	1843	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	123.402345556674	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	-13	True	NA	-31	True	NA	NA	NA	3889388	3923855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_117984.known	chr20	+	8020	7	FSM	ENSG00000125779.24	ENST00000610179.7	8020	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	80.4439073033019	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGTGTGATTGCAAAAA	-15	True	NA	15	True	AATAAA	-22	NA	3889386	3929887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3889729_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_117993.nic	chr20	+	1494	7	NIC	ENSG00000125779.24	novel	1763	7	NA	NA	-27	71	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	144.085237118712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGGCAATCATCT	387	False	NA	-77	True	NA	NA	NA	3889788	3923702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_3889933_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_117995.known	chr20	-	1128	7	FSM	ENSG00000101236.17	ENST00000545616.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	36.3199516641871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATGCCTTTGATAAG	13	True	NA	3	True	NA	NA	NA	4015545	3933566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_3974331_3974401_4015436
transcript_118001.known	chr20	-	7453	6	FSM	ENSG00000101236.17	ENST00000336095.10	7453	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.221584291454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGCATATGCCTTTG	3118	False	NA	0	True	AATAAA	-19	NA	4015389	3927308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015144
transcript_118003.known	chr20	-	7328	6	FSM	ENSG00000101236.17	ENST00000358395.11	7328	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	18.1372544780074	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTGTGCATATGCCTT	0	True	NA	-2	True	AATAAA	-17	NA	4015558	3927310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015436
transcript_118004.nic	chr20	+	1935	5	ISM	ENSG00000125779.24	ENST00000336066.8	1843	7	-70	6045	-68	760	5prime_fragment	FALSE	canonical	0	0	junction_2	149.681954490179	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTCTTTTTTCTTTATT	277	False	NA	NA	False	ATTAAA	-18	NA	3889318	3917810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926
transcript_118005.nic	chr20	+	2078	5	ISM	ENSG00000125779.24	ENST00000610179.7	8020	7	-68	12077	-68	760	5prime_fragment	FALSE	canonical	3	123	junction_2	97.690838874482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTCTTTTTTCTTTATT	277	False	NA	NA	False	ATTAAA	-18	NA	3889318	3917810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3889729_3907925_3908279_3910576_3910831_3912457_3912635_3916926
transcript_118011.nic	chr20	+	1110	2	ISM	ENSG00000125779.24	ENST00000336066.8	1843	7	-70	15230	-68	-2191	5prime_fragment	FALSE	canonical	3	356	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGTCTTGTCTAC	277	False	NA	13	True	ATTAAA	-20	NA	3889318	3908625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3889729_3907925
transcript_118016.known	chr20	+	2164	9	FSM	ENSG00000088826.18	ENST00000278795.7	2164	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	50.5542715801543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	NA	False	NA	44	True	AATAAA	-45	NA	4148778	4187747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4186742_4186833_4187269
transcript_118020.known	chr20	+	2074	8	FSM	ENSG00000088826.18	ENST00000339123.10	2074	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	34.8208241705788	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	NA	False	NA	44	True	AATAAA	-45	NA	4148778	4187747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4187269
transcript_118023.known	chr20	+	2322	8	FSM	ENSG00000088826.18	ENST00000621355.4	2322	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	50.1874038998241	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGTGTATGTGTGTG	NA	False	NA	43	True	AATAAA	-44	NA	4148778	4187746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4186742_4186833_4187269
transcript_118027.known	chr20	+	2164	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	16.8226038412607	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	1	True	NA	24	True	AATAAA	-25	NA	4148827	4187727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
transcript_118033.nic	chr20	+	2312	6	NIC	ENSG00000088826.18	novel	2164	7	NA	NA	13	0	intron_retention	FALSE	canonical	3	83	junction_3	18.3237550736742	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	NA	False	NA	24	True	AATAAA	-25	NA	4148791	4187727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4182849_4183493_4183655_4187269
transcript_118035.known	chr20	+	2429	2	FSM	ENSG00000171867.18	ENST00000424424.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	2	True	NA	11	True	ATTAAA	-22	NA	4686458	4701590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686513_4699215
transcript_118036.known	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	-1	True	NA	9	True	ATTAAA	-20	NA	4686455	4701588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686513_4699210
transcript_118037.known	chr20	+	2574	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	86	False	NA	11	True	ATTAAA	-22	NA	4686542	4701590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686737_4699210
transcript_118038.known	chr20	+	2539	2	FSM	ENSG00000171867.18	ENST00000430350.2	2539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	21	False	NA	11	True	ATTAAA	-22	NA	4686349	4701590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686509_4699210
transcript_118039.known	chr20	+	3981	2	FSM	ENSG00000171864.5	ENST00000305817.3	3981	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGTCTGGTACTTCT	-2	True	NA	5	True	AATAAA	-18	NA	4721908	4728460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4721970_4724540
transcript_118040.nnic	chr20	-	5580	12	NNC	ENSG00000101265.16	novel	5390	12	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	16.9032247889112	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTGCCCCGTGGATGGG	5478	False	NA	-14	True	AATAAA	-14	NA	4823559	4780025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823314
transcript_118041.known	chr20	-	5390	12	FSM	ENSG00000101265.16	ENST00000379400.8	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	10.0008264121331	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCGTGGATGGGTCT	14	True	NA	-11	True	AATAAA	-17	NA	4823608	4780022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823556
transcript_118049.known	chr20	-	6953	17	FSM	ENSG00000089057.15	ENST00000338244.6	6953	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	12.4649508623179	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCTTCACGTGCCT	-8	True	NA	-3	True	AATAAA	-17	NA	5001510	4852357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777_4862908_4867769_4867876_4869905_4870054_4873935_4874093_4874575_4874697_4883641_4883824_4884752_4884824_4885820_4885910_4899554_4899713_4902441_4902559_4912879_4912979_4932454_4932717_4970792_4970920_5001405
transcript_118057.known	chr20	-	1541	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	625.230757400818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	13	True	NA	-22	True	AATAAA	-19	NA	5113076	5099849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
transcript_118060.nnic	chr20	-	1580	4	NNC	ENSG00000089063.15	novel	1642	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	551.828475766399	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	11	True	NA	-22	True	AATAAA	-19	NA	5113078	5099849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_5100932_5106187_5106223_5109331_5109446_5112729
transcript_118061.nnic	chr20	-	1378	4	NNC	ENSG00000089063.15	novel	1541	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	528.189570345934	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	6876	False	5113116	-22	True	AATAAA	-19	NA	5113107	5099849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_5100932_5106187_5106223_5109331_5109446_5112960
transcript_118063.known	chr20	-	1642	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	514.20445566158	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113042	5099839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
transcript_118064.known	chr20	-	1472	4	FSM	ENSG00000089063.15	ENST00000202834.11	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_3	102.303470126873	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	6880	False	5113116	-12	True	AATAAA	-29	NA	5113103	5099839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112960
transcript_118068.known	chr20	-	1359	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	379.653679906657	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	998	False	NA	-4	True	AATAAA	-23	NA	5126626	5114952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
transcript_118070.known	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_5	102.96989851408	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-3	True	NA	-4	True	AATAAA	-23	NA	5119958	5114952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
transcript_118079.known	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_10	18.6703865341169	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	-17	True	NA	5	True	AATAAA	-17	NA	5127007	5197887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
transcript_118087.nnic	chr20	+	2725	13	NNC	ENSG00000101290.14	novel	2713	10	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	81.8070222468028	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTAGTTTGTATTGTA	77	False	NA	48	True	ATTAAA	-30	NA	5127157	5191354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_5127482_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
transcript_118100.known	chr20	-	4446	3	FSM	ENSG00000101292.8	ENST00000678254.1	4446	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGGTTTCAAGTGCTT	-1	True	NA	0	True	ATTAAA	-45	NA	5316954	5299217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5302737_5313911_5314378_5316493
transcript_118104.known	chr20	-	5434	20	FSM	ENSG00000125772.14	ENST00000379019.7	5434	20	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_15	11.1365237244312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGTTTCCTAACTCAGA	-1	True	NA	-12	True	AATAAA	-16	NA	5611006	5544438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
transcript_118108.nic	chr20	-	706	7	ISM	ENSG00000125772.14	ENST00000379019.7	5434	20	-51	35580	-51	-4119	5prime_fragment	FALSE	canonical	3	44	junction_2	15.9861050777091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGATTTAGGTATGACCA	NA	False	NA	NA	False	ATTAAA	-5	NA	5611057	5580018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
transcript_118109.known	chr20	+	585	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	-3	True	NA	6	True	AATAAA	-18	NA	5750392	5773447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5750480_5772861_5773044_5773131
transcript_11811.known	chr1	+	2628	7	FSM	ENSG00000116459.11	ENST00000369722.8	2628	7	0	0	0	0	multi-exon	FALSE	canonical	3	2064	junction_4	71.7280744664644	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGTGCTAAGCAAC	-18	True	NA	NA	False	ATTAAA	-18	NA	111449463	111462773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_118110.known	chr20	+	1633	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	13.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCCCTACTTTCTCT	5	True	NA	NA	False	AATAAA	-15	NA	5750400	5864395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5750480_5772861_5773044_5863023
transcript_118111.known	chr20	+	2462	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4.58257569495584	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGCTTCATTGTTC	0	True	NA	2	True	AATAAA	-13	NA	5911509	5925353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
transcript_118116.known	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	29.0199931082004	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-19	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_118120.known	chr20	-	2976	9	FSM	ENSG00000089195.15	ENST00000466974.5	2976	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	32.3552063043956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	37	True	NA	-4	True	ATTAAA	-21	NA	5950477	5937832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5938727_5941052_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_118122.nic	chr20	-	604	4	ISM	ENSG00000089195.15	ENST00000466974.5	2976	9	-74	6329	7	-1487	5prime_fragment	FALSE	canonical	3	290	junction_1	36.790699307781	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGTTTTTATTTTAA	-37	True	NA	NA	False	ATTAAA	-15	NA	5950551	5944161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_5944254_5944804_5944915_5946405_5946534_5950277
transcript_118123.known	chr20	-	2239	10	FSM	ENSG00000089195.15	ENST00000453074.6	2239	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	98.7522151650281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-44	True	NA	-4	True	ATTAAA	-21	NA	5950558	5937832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5946405_5946534_5950277
transcript_118128.known	chr20	+	3925	7	FSM	ENSG00000088766.12	ENST00000378863.9	3925	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	80.0112839264285	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATGGCTCTAAT	2	True	NA	NA	False	AATAAA	-22	NA	6006122	6040053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_118130.nnic	chr20	+	1618	7	NNC	ENSG00000088766.12	novel	3925	7	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	260.452597521229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTCTTGATTAAT	NA	False	NA	21	True	AATAAA	-22	NA	6006051	6037393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_6006835_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_118132.nnic	chr20	+	1392	7	NNC	ENSG00000088766.12	novel	3925	7	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	262.271328970591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTCTTGATTAAT	-9	True	NA	21	True	AATAAA	-22	NA	6006057	6037393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_6006615_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_118134.known	chr20	+	3859	6	FSM	ENSG00000088766.12	ENST00000452938.5	3859	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	291.144362816799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATCTAGAAATA	-3	True	NA	NA	False	AATAAA	-12	NA	6006092	6040043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6032011_6032081_6034463_6034556_6037073
transcript_118138.nic	chr20	+	1718	2	ISM	ENSG00000088766.12	ENST00000452938.5	3859	6	6	29005	6	-5017	5prime_fragment	FALSE	canonical	3	578	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCATGCTGTATAAAAACA	3	True	NA	NA	False	AAAAAG	-7	NA	6006098	6011038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_6006553_6009774
transcript_11814.known	chr1	+	1040	6	FSM	ENSG00000116459.11	ENST00000369721.8	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	839.936759524192	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTTTCAAGTTGTATAA	-17	True	NA	16	True	AATAAA	-20	NA	111449464	111461332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111449582_111449836_111449874_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_118140.known	chr20	-	2935	5	FSM	ENSG00000125872.8	ENST00000378858.5	2935	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.29128784747792	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTTCCAATTCCTGA	-13	True	NA	NA	False	AAGAAA	-15	NA	6054060	6040545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_6042247_6044542_6044681_6050778_6050984_6052144_6052805_6053829
transcript_118143.known	chr20	-	4637	15	FSM	ENSG00000101311.16	ENST00000217289.9	4637	15	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_14	5.43420760046007	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGGTCCTGTTGTGTCCT	24	True	NA	-7	True	AGTAAA	-19	NA	6123030	6074844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119573_6122773
transcript_118148.nic	chr20	-	1316	4	ISM	ENSG00000101311.16	ENST00000217289.9	4637	15	-601	37724	-601	0	5prime_fragment	FALSE	canonical	3	8	junction_3	4.18993502999218	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	6123631	6112568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_6112624_6115810_6116045_6119403_6119573_6122773
transcript_118149.known	chr20	+	3545	3	FSM	ENSG00000125845.7	ENST00000378827.5	3545	3	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_2	5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTCTATAAAGTCCAA	-6	True	NA	13	True	AATAAA	-17	NA	6767685	6780246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_6768876_6770119_6770473_6778244
transcript_118153.known	chr20	-	6103	8	FSM	ENSG00000125827.9	ENST00000246024.7	6103	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	14.4207899809084	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTTCATTCATTC	-3	True	NA	1	True	NA	NA	NA	8019761	7977345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_7982622_7983793_7983858_7987287_7987390_7996025_7996072_7999731_7999861_8001495_8001542_8010199_8010316_8019437
transcript_118161.known	chr20	+	1810	6	FSM	ENSG00000125869.10	ENST00000246070.3	1810	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.0591260281974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCTGCTTTCTTGAAA	4	True	NA	NA	False	AATAAA	-18	NA	9514589	9530524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_9514917_9515452_9515626_9515999_9516132_9516255_9516362_9518039_9518229_9529641
transcript_118162.known	chr20	+	5429	11	FSM	ENSG00000132623.16	ENST00000378392.6	5429	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	19.7911596426283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	-9	True	NA	14	True	AATACA	-20	NA	10034986	10058303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10035334_10035578_10035643_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_118164.known	chr20	+	5303	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	13.3869293171814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	-26	True	NA	14	True	AATACA	-20	NA	10035048	10058303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_118172.nic	chr20	+	1098	2	ISM	ENSG00000132623.16	ENST00000488991.1	2805	11	-166	16855	-36	-4244	5prime_fragment	FALSE	canonical	3	72	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	NA	False	NA	NA	False	TATAAA	-25	NA	10034950	10038972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_10035334_10038257
transcript_118173.known	chr20	+	2050	8	FSM	ENSG00000132639.14	ENST00000304886.6	2050	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.45686271816937	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATCTGCTTTAATTTCT	-12	True	NA	NA	False	ATTAAA	-15	NA	10218832	10307418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10218978_10275428_10275564_10277684_10277727_10284723_10284773_10292881_10293000_10296924_10297051_10299267_10299413_10306128
transcript_118177.known	chr20	-	6714	6	FSM	ENSG00000125863.20	ENST00000347364.7	6714	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	479.853727712935	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTAGTATTGTGG	-26	True	NA	NA	False	AATAAA	-23	NA	10434222	10401008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10434107
transcript_118179.known	chr20	-	6181	7	FSM	ENSG00000125863.20	ENST00000651692.1	6181	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	350.231669359329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCATCACATACATTA	-18	True	NA	NA	False	AATAAA	-9	NA	10434214	10401620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10428729_10428817_10434107
transcript_118180.nic	chr20	-	808	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-74	8585	-50	-8336	5prime_fragment	FALSE	canonical	3	1118	junction_1	97.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTCTCGTTTGGAA	NA	False	NA	2	True	AATAAA	-28	NA	10434272	10413519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_118181.nic	chr20	-	620	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-77	8776	-53	-8527	5prime_fragment	FALSE	canonical	3	1118	junction_1	97.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGTCATTAAATCATT	NA	False	NA	-60	True	AATAAA	-14	NA	10434275	10413710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_118185.known	chr20	+	6056	8	FSM	ENSG00000149346.15	ENST00000334534.10	6056	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	6.1145527311522	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	-19	True	NA	5	True	AGTAAA	-15	NA	10435304	10628030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
transcript_118192.nnic	chr20	-	4481	26	NNC	ENSG00000101384.12	novel	5940	26	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.5159180131246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTGTCGAGGTGAATTG	-1	True	NA	-3	True	AATAAA	-20	NA	10674037	10637683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_10638459_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
transcript_118193.known	chr20	-	5940	26	FSM	ENSG00000101384.12	ENST00000254958.10	5940	26	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_17	10.985372092014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTGTCGAGGTGAATTG	0	True	NA	-3	True	AATAAA	-20	NA	10673999	10637683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_10639956_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
transcript_11820.known	chr1	+	5024	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-6	0	6	0	multi-exon	FALSE	canonical	3	166	junction_1	27.7098670998956	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	-2	True	NA	8	True	AATAAA	-16	NA	111619782	111716691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_118201.known	chr20	+	4826	6	FSM	ENSG00000132640.15	ENST00000399006.6	4826	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	138.452013347586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	-15	True	NA	33	True	AATAAA	-28	NA	11890816	11926609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_11890955_11917777_11918012_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_118203.known	chr20	+	5137	5	FSM	ENSG00000132640.15	ENST00000405977.5	5137	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	122.964171611084	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	-4	True	NA	33	True	AATAAA	-28	NA	11890827	11926609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_11890955_11917777_11918602_11919085_11919177_11919717_11919837_11922633
transcript_118204.known	chr20	+	4686	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	25.9855729203726	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	NA	False	NA	33	True	AATAAA	-28	NA	11890722	11926609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_118207.known	chr20	+	849	4	FSM	ENSG00000132640.15	ENST00000449299.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	140.733791251426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTGAAAATAAACGCAAG	38	True	NA	NA	False	NA	NA	NA	11890869	11923010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_11890955_11918333_11918602_11919717_11919837_11922633
transcript_118212.known	chr20	-	2342	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	10.9414796225813	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-9	True	NA	-4	True	AATAAA	-18	NA	13638932	13389393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_11823.known	chr1	+	3600	11	FSM	ENSG00000064703.13	ENST00000369702.5	3600	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	31.840854259897	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTTTGCTTTTTTCCTC	-10	True	NA	NA	False	AATATA	-14	NA	111755900	111768000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_118231.known	chr20	-	3188	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_9	25.3115498579802	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGTATAGCACTGAT	-13	True	NA	-14	True	AATAAA	-18	NA	13784919	13714324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_118235.nic	chr20	-	1974	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-106	45410	-106	-45410	5prime_fragment	FALSE	canonical	3	280	junction_4	22.8770490885516	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAAAGAAAATGATATGGA	NA	False	NA	92	True	AATACA	-39	NA	13785025	13759734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_118237.nic	chr20	-	609	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-14	68304	-14	-68304	5prime_fragment	FALSE	canonical	3	303	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTCAACATACTACAG	NA	False	NA	NA	False	AAGAAA	-12	NA	13784933	13782628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_13783184_13784879
transcript_118238.nic	chr20	-	484	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-106	68521	-106	-68521	5prime_fragment	FALSE	canonical	3	303	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAGACTAAAAAAGAAATC	NA	False	NA	NA	False	AATAAA	-12	NA	13785025	13782845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_13783184_13784879
transcript_118239.nic	chr20	+	1203	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	51.8711053501652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-19	True	NA	10	True	AATAAA	-18	NA	13785039	13817228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_11824.known	chr1	+	2393	3	FSM	ENSG00000227811.3	ENST00000658759.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAATGTGTATCCATA	33	False	NA	NA	False	AATAGA	-26	NA	111739578	111747798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111740078_111744374_111744530_111746059
transcript_118241.known	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	44.9109311363858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	NA	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_118243.nic	chr20	+	1130	11	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	39.8473336623669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	NA	False	NA	10	True	AATAAA	-18	NA	13785014	13817228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_118244.known	chr20	+	5449	11	FSM	ENSG00000101247.18	ENST00000378106.10	5449	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	24.9697817371318	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGTGTTTTAGAGTAA	-31	True	NA	NA	False	GATAAA	-15	NA	13785027	13821580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_118245.known	chr20	+	991	10	FSM	ENSG00000101247.18	ENST00000463598.1	991	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	56.4153468306691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-9	True	NA	10	True	AATAAA	-18	NA	13785049	13817228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_118247.known	chr20	+	933	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	48.041905575841	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	29	True	NA	10	True	AATAAA	-18	NA	13785087	13817228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_118252.known	chr20	+	1105	4	FSM	ENSG00000172264.18	ENST00000483997.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	6.68331255192114	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTATGGTGATTTCT	-2	True	NA	NA	False	AATAAA	-15	NA	13995501	14053679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13995810_14002287_14002405_14051921_14052021_14053098
transcript_118256.known	chr20	-	4977	3	FSM	ENSG00000125848.10	ENST00000341420.5	4977	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTTTTCCACACAGA	-2	True	NA	NA	False	ATTAAA	-19	NA	14337612	14322984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_14327559_14329133_14329328_14337403
transcript_118257.known	chr20	-	4776	2	FSM	ENSG00000125848.10	ENST00000378053.3	4776	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGTTTTCCACAC	2	True	NA	NA	False	ATTAAA	-16	NA	14337608	14322987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_14327559_14337403
transcript_118259.known	chr20	-	617	2	FSM	ENSG00000125848.10	ENST00000462077.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAATTAAGCTACACAAA	-4	True	NA	-44	True	NA	NA	NA	14337614	14328921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_14329328_14337403
transcript_11826.known	chr1	-	5951	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATTCCCTCTGAA	-11	True	NA	-6	True	AATAAA	-18	NA	111739395	111722063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111727805_111739185
transcript_118260.known	chr20	-	5276	26	FSM	ENSG00000089177.19	ENST00000354981.7	5276	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_24	14.8431802522236	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTAGCTCAGCTTATTT	2	True	NA	-16	True	ATTAAA	-18	NA	16573448	16272103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_16273412_16312334_16312419_16335925_16336016_16356329_16356453_16370585_16370637_16371664_16371762_16374256_16374410_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
transcript_118266.nic	chr20	-	2981	19	ISM	ENSG00000089177.19	ENST00000408042.5	4640	23	17	12319	17	588	5prime_fragment	FALSE	canonical	0	0	junction_17	15.8729523808254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATGGAAGAAAAAGAAG	6	True	NA	NA	False	NA	NA	NA	16573416	16379161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
transcript_118270.nic	chr20	-	1965	18	ISM	ENSG00000089177.19	ENST00000408042.5	4640	23	17	14865	17	-1958	5prime_fragment	FALSE	canonical	0	0	junction_16	16.3058993294199	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAAGTAAAAGGTAAGT	6	True	NA	NA	False	NA	NA	NA	16573416	16381707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
transcript_118274.known	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	396.736968560055	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	NA	False	NA	20	True	AATAAA	-17	NA	16729960	16741776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_118275.known	chr20	+	2411	7	FSM	ENSG00000125870.11	ENST00000246071.8	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	818	junction_1	421.929167304445	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGAGTTTGGGCAATT	4	True	NA	NA	False	AATAAA	-23	NA	16730025	16742564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_118277.nic	chr20	+	429	4	ISM	ENSG00000125870.11	ENST00000377943.9	1588	7	37	4426	-28	-4426	5prime_fragment	FALSE	canonical	3	890	junction_1	510.962707923865	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAACTGTGGAACAGAC	-24	True	NA	NA	False	AAAAAG	-12	NA	16729997	16737350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260
transcript_118278.nic	chr20	+	529	4	ISM	ENSG00000125870.11	ENST00000246071.8	2411	7	-28	5214	-28	-4426	5prime_fragment	FALSE	canonical	3	818	junction_1	544.230547552128	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAACTGTGGAACAGAC	-24	True	NA	NA	False	AAAAAG	-12	NA	16729997	16737350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260
transcript_118282.known	chr20	-	2217	8	FSM	ENSG00000125864.14	ENST00000377873.8	2217	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	4.05069910821652	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTTTGTCTAATTAATA	-27	True	NA	-1	True	ATTAAA	-19	NA	17531379	17493904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17495030_17496937_17497024_17498819_17499041_17508888_17508997_17511975_17512069_17514720_17514817_17524847_17524909_17530952
transcript_118286.known	chr20	+	1853	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1175.03986634497	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	-10	True	NA	29	True	AATAAA	-19	NA	17570081	17608242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
transcript_11829.known	chr1	+	5864	6	FSM	ENSG00000143079.15	ENST00000271277.11	5864	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	18.1173949562292	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTAGTGGTTCTCAAA	-5	True	NA	4	True	AATAAA	-16	NA	112396213	112461164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112396273_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_118292.nic	chr20	-	5012	24	NIC	ENSG00000125844.17	novel	5049	25	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	125.662734624653	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGTCTCGTCTGGTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	17682282	17613678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17660529_17682027
transcript_118294.known	chr20	-	2485	24	FSM	ENSG00000125844.17	ENST00000455029.3	2485	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	174.484019233464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCTTACAAATAAACCAAC	191	False	NA	-42	True	AAAAAG	-36	NA	17682060	17614127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17679998_17680076_17682027
transcript_118300.nic	chr20	-	834	3	ISM	ENSG00000125844.17	ENST00000377807.6	3792	26	-45	46395	-33	-467	5prime_fragment	FALSE	canonical	3	76	junction_1	1	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAAAGTGGAACCAGC	NA	False	NA	NA	False	AAAAAG	-16	NA	17682328	17660072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_17660529_17679998_17680076_17682027
transcript_118301.nic	chr20	-	581	3	ISM	ENSG00000125844.17	ENST00000377807.6	3792	26	-45	46648	-33	-720	5prime_fragment	FALSE	canonical	3	76	junction_1	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAGAAAACAGTGGAGA	NA	False	NA	-4	True	AAGAAA	-3	NA	17682328	17660325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_17660529_17679998_17680076_17682027
transcript_118302.known	chr20	-	1191	2	FSM	ENSG00000125844.17	ENST00000398782.2	1191	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAAGGGGCCCAGAACC	NA	False	NA	NA	False	GGGGCT	-18	NA	17682295	17659605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17660529_17682027
transcript_118305.known	chr20	-	1583	4	FSM	ENSG00000125850.11	ENST00000278780.7	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	17.9071680247511	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACATTGACCTACAGCT	-14	True	NA	-16	True	AATAAA	-34	NA	18057916	18024162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18024953_18041533_18041724_18056656_18056878_18057534
transcript_118306.known	chr20	-	1263	4	FSM	ENSG00000125850.11	ENST00000483661.5	1263	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	36.6454484061648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	162	False	NA	-17	True	AATAAA	-18	NA	18059050	18024261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18024953_18041533_18041724_18056656_18056878_18058889
transcript_118310.nic	chr20	-	1856	3	ISM	ENSG00000125850.11	ENST00000278780.7	1583	4	384	0	384	0	3prime_fragment	FALSE	canonical	3	80	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACATTGACCTACAGCT	1680	False	NA	-16	True	AATAAA	-34	NA	18057532	18024162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_18024953_18041533_18041724_18056656
transcript_118312.nic	chr20	-	3255	3	ISM	ENSG00000125850.11	ENST00000483661.5	1263	4	20	0	20	0	intron_retention	FALSE	canonical	3	80	junction_2	3.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	0	True	NA	-17	True	AATAAA	-18	NA	18059030	18024261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_18024953_18041533_18041724_18056656
transcript_118313.nnic	chr20	-	1079	3	NIC	ENSG00000125850.11	novel	1263	4	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	37	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	125	False	NA	-17	True	AATAAA	-18	NA	18059087	18024261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_18024953_18041533_18041724_18058889
transcript_118314.known	chr20	-	990	3	FSM	ENSG00000125850.11	ENST00000494030.1	990	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	24	False	NA	-17	True	AATAAA	-18	NA	18059188	18024261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18024953_18041533_18041724_18059079
transcript_118318.known	chr20	-	2288	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_13	125.901295047647	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	NA	False	NA	-24	True	AATAAA	-20	NA	17968980	17941596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
transcript_118321.known	chr20	-	3087	14	FSM	ENSG00000089006.17	ENST00000483485.5	3087	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	304.830964896553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	6830	False	NA	-24	True	AATAAA	-20	NA	17961995	17941596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951020_17951328_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17961139
transcript_118327.known	chr20	-	2341	13	FSM	ENSG00000089006.17	ENST00000377759.9	2341	13	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_10	86.4744663662826	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	-3	True	NA	-27	True	AATAAA	-17	NA	17968794	17941599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374
transcript_118328.known	chr20	-	2025	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_12	191.521466739951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-9	True	NA	-24	True	AATAAA	-20	NA	17968800	17941596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
transcript_118349.known	chr20	-	562	3	FSM	ENSG00000089006.17	ENST00000481323.1	562	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATTGCATCAAGCGTC	14	False	NA	NA	False	NA	NA	NA	17968811	17967918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17968290_17968374_17968454_17968699
transcript_11835.known	chr1	-	4255	15	FSM	ENSG00000007341.19	ENST00000358039.9	4255	15	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_3	29.4143516269296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTCTATTTGTGTAAT	-12	True	NA	NA	False	AATAAA	-31	NA	112619141	112523513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
transcript_118351.known	chr20	-	1087	1	FSM	ENSG00000089006.17	ENST00000606557.1	1087	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	51	False	NA	-19	True	AATAAA	-33	NA	17968774	17967687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17967700_17968800
transcript_118352.known	chr20	-	3931	1	FSM	ENSG00000089006.17	ENST00000606570.1	3931	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	87	False	NA	-27	True	AATAAA	-17	NA	17945530	17941599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17941600_17945500
transcript_118355.known	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	103.939886472903	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	15	True	NA	13	True	AATAAA	-22	NA	17969072	17991122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
transcript_118356.known	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.9821314541096	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	0	True	NA	13	True	AATAAA	-22	NA	17969017	17991122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
transcript_118368.known	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	14	True	NA	13	True	AATAAA	-22	NA	17969114	17991122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17969142_17969800_17970371_17989938
transcript_118369.known	chr20	+	740	3	FSM	ENSG00000125871.14	ENST00000467391.1	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	112.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAATTTGTTGAAATG	33	False	NA	NA	False	NA	NA	NA	17970056	17990231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17970371_17988165_17988299_17989938
transcript_11837.known	chr1	-	1780	15	FSM	ENSG00000007341.19	ENST00000490067.5	1780	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	31.0635457981059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCACCAAATTTTTCTG	506	False	NA	-103	True	NA	NA	NA	112619189	112525985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616845_112618908
transcript_118372.known	chr20	+	3917	12	FSM	ENSG00000149474.15	ENST00000678777.1	3917	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	151.815841027137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTAGGTGTTCTCAAA	-13	True	NA	-24	True	NA	NA	NA	18137848	18188327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18183534_18183582_18184601_18184793_18187285
transcript_118374.known	chr20	+	3927	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	103.96080992374	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGCGTCAATCTAGTC	NA	False	NA	23	True	AATAAA	-24	NA	18137841	18188374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_118375.known	chr20	+	4064	11	FSM	ENSG00000149474.15	ENST00000677610.1	4064	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	85.0790808601033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCAGTTTGCTTTCAA	16	True	NA	36	True	AATAAA	-37	NA	18138107	18188387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138445_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_118376.known	chr20	+	2932	11	FSM	ENSG00000149474.15	ENST00000464792.2	2932	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.4801133209248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGAATACAGCTCACAGAG	114	False	NA	NA	False	NA	NA	NA	18138205	18187459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138336_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_118380.known	chr20	+	1151	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	1	True	NA	12	True	AATAAA	-18	NA	18137862	18143169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138052_18142207
transcript_118384.nic	chr20	+	1539	2	ISM	ENSG00000149474.15	ENST00000677610.1	4064	11	-240	45218	5	-44290	5prime_fragment	FALSE	canonical	3	33	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	6	True	NA	12	True	AATAAA	-18	NA	18137867	18143169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_18138445_18142207
transcript_118389.known	chr20	+	2701	7	FSM	ENSG00000125846.16	ENST00000377671.7	2701	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	13.5246688191122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	NA	False	NA	17	True	AATAAA	-25	NA	18288476	18316996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315071
transcript_118391.known	chr20	+	2717	6	FSM	ENSG00000125846.16	ENST00000396026.7	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7556339129849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18297984_18298063_18305007_18305179_18305680_18305808_18306297_18306394_18315071
transcript_118394.known	chr20	+	2622	5	FSM	ENSG00000125846.16	ENST00000402618.6	2622	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.6389281784928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18310168_18310307_18315068
transcript_118397.known	chr20	+	2318	5	FSM	ENSG00000125846.16	ENST00000628216.2	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	16.8893457540545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	-27	True	NA	12	True	AATAAA	-20	NA	18288510	18316991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18297984_18298063_18305680_18305808_18306297_18306394_18315068
transcript_11840.known	chr1	-	4206	14	FSM	ENSG00000007341.19	ENST00000360743.8	4206	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.7005419494384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTAGTGTCTATTTGTG	506	False	NA	NA	False	AATAAA	-27	NA	112619189	112523517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112526112_112541950_112542091_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
transcript_118400.known	chr20	+	523	4	FSM	ENSG00000125846.16	ENST00000434018.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.779617264871	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTCCTGAGGGAGAAG	-9	True	NA	NA	False	NA	NA	NA	18288528	18315279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18315068
transcript_118401.nnic	chr20	+	2243	4	NIC	ENSG00000125846.16	novel	2717	6	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	15.5777619273972	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	-30	True	NA	15	True	AATAAA	-23	NA	18288507	18316994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315071
transcript_118402.known	chr20	+	2341	3	FSM	ENSG00000125846.16	ENST00000535822.5	2341	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18306297_18306394_18315071
transcript_118407.known	chr20	-	3295	20	FSM	ENSG00000089091.16	ENST00000377630.9	3295	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	32.39446962137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	9	True	NA	0	True	AATAAA	-21	NA	18467030	18383366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465378_18466995
transcript_118412.nnic	chr20	-	1735	7	NNC	ENSG00000089091.16	novel	1709	7	NA	NA	187	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	32.4636548911069	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394516	18383366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18394461
transcript_118413.nic	chr20	-	1846	6	ISM	ENSG00000089091.16	ENST00000476058.5	1709	7	187	0	187	0	3prime_fragment	FALSE	canonical	3	66	junction_5	16.1567323428966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394516	18383366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253
transcript_118416.nic	chr20	-	2571	2	ISM	ENSG00000089091.16	ENST00000460891.5	3156	14	-73	61217	-44	-46841	intron_retention	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAATCCTTGCAATTCT	NA	False	NA	NA	False	AAAACA	-19	NA	18467074	18459560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_18460307_18465249
transcript_118418.known	chr20	+	2156	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	15.2868407462104	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTATGGTATTCTGTT	-24	True	NA	NA	False	AATAAA	-21	NA	18467389	18484646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_118419.known	chr20	+	2257	9	FSM	ENSG00000132664.12	ENST00000462997.5	2257	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	41.5990910357426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	-25	True	NA	NA	False	AATAAA	-18	NA	18467388	18484643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18467672_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_118424.known	chr20	-	3843	5	FSM	ENSG00000089050.16	ENST00000337227.9	3843	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	14.1155942134931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	7	True	NA	NA	False	ATTAAA	-20	NA	18497225	18486539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_118426.known	chr20	-	830	4	FSM	ENSG00000089050.16	ENST00000491835.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	47.588514020367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTAAAATTAAATAGGT	15	True	NA	NA	False	NA	NA	NA	18497174	18489458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18497068
transcript_118432.known	chr20	+	3026	20	FSM	ENSG00000101310.17	ENST00000650089.1	3026	20	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	107.989303871691	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18507973_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_118438.known	chr20	+	3464	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	110.440442831158	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	2919	False	NA	NA	False	AATATA	-19	NA	18507519	18561415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_118441.known	chr20	+	2680	20	FSM	ENSG00000101310.17	ENST00000643747.1	2680	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	181.729197943098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAAATCTAGATG	-27	True	NA	-2	True	NA	NA	NA	18507889	18561055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524486_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_118443.known	chr20	+	3351	20	FSM	ENSG00000101310.17	ENST00000377465.6	3351	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	167.142515532748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18508298_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_118456.known	chr20	+	490	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	0	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	-8	True	NA	18	True	AATAAA	-18	NA	18567431	18569560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18567597_18569235
transcript_118457.known	chr20	+	3953	6	FSM	ENSG00000125821.13	ENST00000377452.4	3953	6	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_4	35.3417600014487	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGAGAATGGGGTGGAC	-1	True	NA	NA	False	NA	NA	NA	18588053	18766644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359
transcript_118459.known	chr20	+	1539	1	FSM	ENSG00000273148.1	ENST00000609087.1	1539	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGGCCTTTGTTTA	452	False	NA	NA	False	AATAAA	-25	NA	18794528	18796067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18794500_18796100
transcript_118460.known	chr20	+	3922	17	FSM	ENSG00000185052.13	ENST00000328041.11	3922	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	4.62162038683404	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGAAAGCTGTGCAT	4	True	NA	44	True	AATAAA	-45	NA	19212641	19722926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_19212985_19280958_19281088_19515487_19515565_19579999_19580075_19584970_19585056_19585440_19585545_19654061_19654137_19665863_19665890_19673600_19673655_19681857_19681992_19684175_19684337_19685099_19685362_19693258_19693426_19696796_19696912_19698567_19698681_19717527_19717594_19720990
transcript_118464.known	chr20	+	1040	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	76.8728820846467	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	23	True	NA	58	True	AATACA	-43	NA	20017361	20033655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_118467.known	chr20	+	920	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	284.946924882512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	-29	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
transcript_118468.known	chr20	+	1000	5	FSM	ENSG00000173418.12	ENST00000480550.1	1000	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	312.241493078675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20	True	NA	32	True	TATAAA	-35	NA	20017358	20033629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_20017450_20025668_20025768_20026783_20026920_20032507_20032654_20033101
transcript_118471.known	chr20	-	4015	14	FSM	ENSG00000101343.15	ENST00000536226.2	4015	14	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_11	24.6749279838041	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTTGTGGGTTTTTC	-16	True	NA	NA	False	AGTAAA	-24	NA	20052466	20034367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_20036363_20037322_20037572_20038348_20038451_20039608_20039849_20040685_20040767_20041565_20041626_20042324_20042517_20043491_20043663_20045307_20045487_20047764_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
transcript_118474.nic	chr20	-	340	2	ISM	ENSG00000101343.15	ENST00000536226.2	4015	14	-12	16102	-12	-14328	5prime_fragment	FALSE	canonical	3	234	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCAGTGTGGTATCTT	-28	True	NA	NA	False	ATTAAA	-26	NA	20052478	20050469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_20050623_20052291
transcript_118479.nic	chr20	-	2179	15	ISM	ENSG00000188559.16	ENST00000202677.12	9545	40	0	215668	0	-14021	5prime_fragment	FALSE	canonical	3	43	junction_13	9.89021367466913	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAAGCAACGAGGCA	5	True	NA	NA	False	GATAAA	-15	NA	20712644	20605197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
transcript_118486.known	chr20	-	9545	40	FSM	ENSG00000188559.16	ENST00000202677.12	9545	40	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_38	12.4546250739663	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTGTGAAAGCATA	5	True	NA	-1	True	AATAAA	-25	NA	20712644	20389529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_20393254_20396694_20396735_20412026_20412149_20472828_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512_20513285_20520916_20521101_20524405_20524544_20524829_20524899_20526251_20526363_20531686_20531796_20535744_20535804_20536655_20536785_20546703_20546833_20571457_20571614_20571847_20571947_20572874_20573069_20583049_20583227_20584864_20584956_20589267_20589366_20591176_20591315_20601681_20601847_20605174_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
transcript_118489.nic	chr20	+	2155	13	NIC	ENSG00000088970.16	novel	2102	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_7	44.3552577366978	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21125974	21246622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_118490.known	chr20	+	2102	13	FSM	ENSG00000088970.16	ENST00000619189.5	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	36.263981977837	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	-3	True	NA	NA	False	AATAAA	-20	NA	21126081	21246622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_11850.known	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_9	99.3668847140625	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	5	True	NA	27	True	AATATA	-18	NA	112619831	112671616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
transcript_118500.known	chr20	+	1875	11	FSM	ENSG00000088970.16	ENST00000616848.4	1875	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	66.3463638792662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGTGTTAATATGT	0	True	NA	NA	False	AATAAA	-16	NA	21126051	21246618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_21126205_21132096_21132160_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_118504.nic	chr20	+	1678	7	ISM	ENSG00000088970.16	ENST00000619189.5	2102	13	-107	40947	-8	-27239	5prime_fragment	FALSE	canonical	3	139	junction_4	32.704484911604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCCAGGCGCCGTGG	NA	False	NA	NA	False	TTTAAA	-15	NA	21125974	21205675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490
transcript_118505.nic	chr20	+	1965	7	ISM	ENSG00000088970.16	ENST00000619189.5	2102	13	-107	40660	-8	-26952	5prime_fragment	FALSE	canonical	3	139	junction_4	32.704484911604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGATGTGCAGATTA	NA	False	NA	NA	False	NA	NA	NA	21125974	21205962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490
transcript_118511.known	chr20	-	391	1	FSM	ENSG00000214535.3	ENST00000457423.1	391	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	NA	False	NA	NA	False	AAAACA	-35	NA	21166596	21166205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_21166200_21166600
transcript_118515.known	chr20	+	3408	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	0	0	0	0	multi-exon	TRUE	canonical	3	856	junction_5	86.7217590679426	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	-6	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_118517.nnic	chr20	+	3650	30	NNC	ENSG00000088930.8	novel	3408	30	NA	NA	452	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	197.441518908316	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	-33	True	NA	25	True	AATAAA	-19	NA	21303782	21389825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_21304168_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_118525.nic	chr20	+	1383	14	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-47	50747	-47	-50747	5prime_fragment	FALSE	canonical	3	856	junction_5	68.7188767637295	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGAAGGTGAGTTTTA	-1	True	NA	29	True	AAAAAG	-4	NA	21303283	21339078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043
transcript_11853.known	chr1	-	572	6	FSM	ENSG00000007341.19	ENST00000479436.5	572	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	22.2656686403081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGCAAATGATTTTTAT	754	False	NA	NA	False	AATAAA	-17	NA	112618941	112591481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
transcript_118530.nic	chr20	+	1348	13	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-47	55640	-47	-55640	5prime_fragment	FALSE	canonical	3	856	junction_5	70.1076057848854	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTGTTTCTATTGCAG	-1	True	NA	8	True	AAAAAG	-16	NA	21303283	21334185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077
transcript_118541.known	chr20	-	974	1	FSM	ENSG00000275457.1	ENST00000622628.1	974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATCTAGCCGGTATTTA	NA	False	NA	-8	True	AATAAA	-21	NA	21303704	21302730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_21302700_21303700
transcript_118546.known	chr20	-	907	4	ISM	ENSG00000259974.4	ENST00000638550.3	1840	5	5	3948	5	-3709	5prime_fragment	FALSE	canonical	3	87	junction_1	7.58653778449403	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAGTCTTCTGTGACTA	1	True	NA	-5	True	AATAAA	-15	NA	22578580	22564500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_22565117_22566682_22566811_22567793_22567886_22578509
transcript_11855.known	chr1	-	821	4	FSM	ENSG00000007341.19	ENST00000473206.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	52.9297227987787	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATCCTAAGTGGTTTCC	3	True	NA	NA	False	NA	NA	NA	112619126	112607240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112607598_112610840_112611004_112616812_112616896_112618908
transcript_118554.known	chr20	-	2538	2	FSM	ENSG00000125798.15	ENST00000419308.7	2538	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGAATTTTACAGTAG	-6	True	NA	NA	False	AATAAA	-20	NA	22584572	22580997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_22583155_22584191
transcript_118559.known	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	-9	True	NA	15	True	AATACA	-14	NA	23350790	23354771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_23351062_23353980
transcript_118561.known	chr20	-	514	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	170	8	103	0	multi-exon	FALSE	canonical	2	7	junction_1	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	4713	False	NA	NA	False	AATAAA	-16	NA	23358005	23356593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23356970_23357050_23357138_23357954
transcript_118562.known	chr20	+	4834	6	FSM	ENSG00000125812.16	ENST00000338121.10	4834	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	8.84081444212014	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGGGTACTTGTCAAT	-2	True	NA	NA	False	AATAAA	-34	NA	23362181	23373062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_23362238_23364362_23365748_23367002_23367098_23368761_23368930_23369583_23369742_23370090
transcript_11857.known	chr1	+	739	3	FSM	ENSG00000116489.13	ENST00000485542.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_1	45	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAATCTAAACTTG	21	False	NA	NA	False	NA	NA	NA	112619804	112650013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112619884_112647209_112647274_112649417
transcript_118570.known	chr20	-	3837	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	27.7562605550532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-33	True	NA	-1	True	AATAAA	-19	NA	23421488	23374521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
transcript_118572.known	chr20	-	3754	10	FSM	ENSG00000125814.17	ENST00000432543.6	3754	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	33.4863156129983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	-64	True	NA	2	True	AATAAA	-22	NA	23421519	23374518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23402992_23403073_23421304
transcript_118576.known	chr20	-	782	9	FSM	ENSG00000125814.17	ENST00000468128.5	782	9	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_6	28.341389785965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACAGTGAAGCTTACAC	-17	True	NA	NA	False	TTTAAA	-43	NA	23421472	23379471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23397071_23397189_23402992_23403073_23421304
transcript_118578.known	chr20	-	1651	7	FSM	ENSG00000125814.17	ENST00000472855.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	21.1633855724666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAACTAAGTAGTGAG	41	True	NA	NA	False	ATTAAA	-13	NA	23421414	23378798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23402992_23403073_23421304
transcript_118581.known	chr20	-	576	3	FSM	ENSG00000125831.10	ENST00000377009.8	576	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAAGATCGTGATTC	-5	True	NA	NA	False	AATAAA	-15	NA	23452876	23450411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23450590_23451815_23451921_23452583
transcript_118582.known	chr20	-	461	2	FSM	ENSG00000125831.10	ENST00000377007.3	461	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGTGATTCCACTTTTTT	14	False	NA	NA	False	AATAAA	-24	NA	23452857	23450402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23450590_23452583
transcript_118583.known	chr20	-	3286	4	FSM	ENSG00000101439.9	ENST00000398411.5	3286	4	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_1	442.218900043356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTCAAATTCTTATTT	39	False	NA	NA	False	AATAAA	-22	NA	23637945	23626705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23629466_23633913_23634000_23635253_23635368_23637619
transcript_11859.known	chr1	-	990	4	FSM	ENSG00000007341.19	ENST00000467335.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.6968012652072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACGCAGTTTGTGATATT	NA	False	NA	-4	True	AATAAA	-17	NA	112619774	112610458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112611004_112616812_112616896_112618908_112619140_112619643
transcript_118594.known	chr20	-	793	3	FSM	ENSG00000101439.9	ENST00000376925.8	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_2	31.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	1	True	NA	-10	True	AATAAA	-15	NA	23637955	23633656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23634000_23635253_23635368_23637619
transcript_118596.known	chr20	-	832	4	FSM	ENSG00000101439.9	ENST00000398409.1	832	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	449.748818786665	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	NA	False	NA	-10	True	AATAAA	-15	NA	23638473	23633656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23634000_23635253_23635368_23637619_23637933_23638411
transcript_118597.known	chr20	-	749	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	2	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-1	True	NA	NA	False	ATTAAA	-14	NA	23750935	23747561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23747900_23749015_23749130_23750638
transcript_118598.known	chr20	-	746	3	FSM	ENSG00000170369.4	ENST00000304725.3	746	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-1	True	NA	NA	False	ATTAAA	-14	NA	23826729	23823768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23824104_23825209_23825324_23826432
transcript_11860.known	chr1	-	685	4	FSM	ENSG00000007341.19	ENST00000498383.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.230753383409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	18	True	NA	0	True	AATAAA	-21	NA	112619111	112610454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112610691_112610840_112611004_112616812_112616896_112618908
transcript_118606.known	chr20	+	2092	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	17.2819751957543	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	-38	True	NA	45	True	NA	NA	NA	24469628	24666616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
transcript_118609.nnic	chr20	+	1997	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	183	-84	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	21.0449254902195	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGCTGTTTTACGAG	86	False	NA	23	True	NA	NA	NA	24469811	24666532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_118610.nnic	chr20	+	2081	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	183	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	21.0449254902195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	86	False	NA	45	True	NA	NA	NA	24469811	24666616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_118618.known	chr20	-	2117	10	FSM	ENSG00000101474.12	ENST00000451442.5	2117	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	270.576522117104	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	136	False	NA	-4	True	AATAAA	-34	NA	24992642	24962924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_24964023_24964374_24964399_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_118623.known	chr20	-	2202	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	56.0600961023079	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	27	False	24992778	-4	True	AATAAA	-34	NA	24992751	24962924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_118631.nnic	chr20	-	2035	8	NIC	ENSG00000101474.12	novel	2202	9	NA	NA	-47	-21	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	221.681698636139	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCTGCTGATTAACCTT	NA	False	NA	-25	True	AATAAA	-13	NA	24992798	24962945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_24964023_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_118640.known	chr20	-	3632	14	FSM	ENSG00000154930.15	ENST00000323482.9	3632	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.98814812209714	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTGTGGTGATTT	-7	True	NA	-5	True	AATAAA	-16	NA	25058139	25006236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25007942_25009269_25009389_25012600_25012665_25012811_25012940_25013535_25013663_25013960_25014074_25015137_25015231_25020009_25020148_25021388_25021537_25022939_25023093_25023465_25023642_25030758_25030959_25048084_25048182_25057768
transcript_118657.nic	chr20	+	2843	15	NIC	ENSG00000197586.13	novel	2766	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_13	92.329075394836	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	0	True	NA	36	True	AATAAA	-29	NA	25195669	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_118658.known	chr20	+	4104	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	75.9804284681528	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGTGTCCAAAAATTTAT	-12	True	NA	NA	False	NA	NA	NA	25195711	25228075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_118663.known	chr20	+	2766	15	FSM	ENSG00000197586.13	ENST00000360031.6	2766	15	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	78.61648059032	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-23	True	NA	36	True	AATAAA	-29	NA	25195700	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_118677.known	chr20	+	2654	14	FSM	ENSG00000197586.13	ENST00000433259.6	2654	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	102.899790397772	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	33	True	NA	36	True	AATAAA	-29	NA	25195756	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_118678.nic	chr20	+	2698	14	NIC	ENSG00000197586.13	novel	2654	14	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_2	88.0249426727696	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	0	True	NA	36	True	AATAAA	-29	NA	25195669	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_118689.nic	chr20	+	2768	14	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_12	91.6997286620107	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	6	False	NA	36	True	AATAAA	-29	NA	25195675	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_118690.known	chr20	+	2708	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	72.3440988543866	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-31	True	NA	36	True	AATAAA	-29	NA	25195692	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_118699.nic	chr20	+	2430	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	3	94	junction_1	72.9438520751102	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	NA	False	NA	36	True	AATAAA	-29	NA	25195648	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_118706.nic	chr20	+	2666	13	NIC	ENSG00000197586.13	novel	2654	14	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_11	103.44520154276	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	6	False	NA	36	True	AATAAA	-29	NA	25195675	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_118707.nic	chr20	+	2623	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	85.9461637047027	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	6	False	NA	36	True	AATAAA	-29	NA	25195675	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_118717.nic	chr20	+	2328	12	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	87.8350256761913	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	NA	False	NA	36	True	AATAAA	-29	NA	25195648	25226729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_118742.known	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_10	31.8025417545495	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	10	True	NA	34	True	ATTAAA	-24	NA	25248084	25298012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
transcript_118761.known	chr20	-	1577	13	FSM	ENSG00000100997.20	ENST00000376542.8	1577	13	0	0	0	0	multi-exon	TRUE	canonical	1	53	junction_1	290.112717558002	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGTTGCAAGTGAAATCC	-12	True	NA	NA	False	AATAAA	-24	NA	25390835	25294742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25295031_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
transcript_118762.known	chr20	-	1960	13	FSM	ENSG00000100997.20	ENST00000339157.10	1960	13	0	0	0	0	multi-exon	FALSE	canonical	1	320	junction_4	179.691150929093	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTCTCTGCAGCGC	-12	True	NA	-21	True	AATAAA	-16	NA	25390835	25300213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25300885_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
transcript_118787.nnic	chr20	+	2274	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	191.655089860373	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-24	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447066_25448102
transcript_118788.known	chr20	+	3311	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	33.0689515339624	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-24	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
transcript_118790.nic	chr20	+	1642	4	ISM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	29204	0	1164	5prime_fragment	FALSE	canonical	3	544	junction_3	9.2736184954957	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAATGTGTTTGCCATT	-24	True	NA	NA	False	AAGAAA	-14	NA	25407672	25419359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104
transcript_118799.known	chr20	-	4991	24	FSM	ENSG00000101004.15	ENST00000278886.11	4991	24	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_18	39.7899019211663	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	17	True	NA	-6	True	AATAAA	-21	NA	25585531	25452696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_118807.known	chr20	-	3801	23	FSM	ENSG00000101004.15	ENST00000422516.5	3801	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	48.7186220272229	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTATAG	31	False	NA	5	True	NA	NA	NA	25585517	25452825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_118826.nic	chr20	-	3351	16	ISM	ENSG00000101004.15	ENST00000422516.5	3801	23	-108	25129	-94	3883	5prime_fragment	FALSE	canonical	3	99	junction_10	27.7605635549585	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGACTCGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25585625	25477954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_118828.nnic	chr20	-	3384	16	NNC	ENSG00000101004.15	novel	3801	23	NA	NA	-94	3883	at_least_one_novel_splicesite	TRUE	canonical	3	39	junction_5	37.4169302143651	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGACTCGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25585625	25477954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25490019_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_118830.nic	chr20	-	2072	16	ISM	ENSG00000101004.15	ENST00000422516.5	3801	23	-44	26344	-30	2668	5prime_fragment	FALSE	canonical	3	99	junction_10	27.7605635549585	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTTTGAGAAGGAGAGG	-13	True	NA	4	True	NA	NA	NA	25585561	25479169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_118849.nic	chr20	-	4061	5	ISM	ENSG00000101004.15	ENST00000422516.5	3801	23	-48	54426	-34	-18269	5prime_fragment	FALSE	canonical	3	110	junction_4	13.1624465810882	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGGCTGCAGCAAACT	-17	True	NA	NA	False	NA	NA	NA	25585565	25507251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_118850.known	chr20	-	3803	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTCATCTCTTT	-32	True	NA	NA	False	AATAAA	-18	NA	25624014	25612934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25616582_25623858
transcript_118855.known	chr20	-	4237	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	8.57321409974112	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGGACACTGACAG	-8	True	NA	NA	False	ATTAAA	-16	NA	25696853	25673194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
transcript_118866.known	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	26	junction_1	24.6421260243511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	17	True	NA	-79	True	AAAAAG	-37	NA	28602664	28580708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_118867.known	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	33	junction_7	21.7873242964803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	4	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_118870.nic	chr20	-	872	8	FSM	ENSG00000282826.3	ENST00000686484.1	875	8	0	3	0	0	multi-exon	FALSE	canonical	3	49	junction_1	18.688641098872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28	True	NA	0	True	TATAAA	-16	NA	28602843	28583024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_118881.known	chr20	+	1585	13	FSM	ENSG00000101294.18	ENST00000466766.2	1585	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	351.799737856007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCCGGGAGCCAG	-21	True	NA	-13	True	AAGAAA	-11	NA	31514454	31569444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31527921_31528051_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_118882.known	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	341.59596829523	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	-34	True	NA	24	True	ATTAAA	-18	NA	31514441	31569543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
transcript_118883.known	chr20	+	1809	13	FSM	ENSG00000101294.18	ENST00000674240.1	1809	13	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_11	330.473145656345	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514427	31569567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
transcript_118889.known	chr20	+	1606	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_3	79.9821261024472	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514427	31569567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_118892.known	chr20	+	1655	12	FSM	ENSG00000101294.18	ENST00000650367.1	1655	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	368.991097117622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCACACCCTGCAGGCA	22	True	NA	-50	True	NA	NA	NA	31514497	31569407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538555_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554759_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_118895.nic	chr20	+	1487	11	NIC	ENSG00000101294.18	novel	1715	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_10	231.678570437578	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	-39	True	NA	24	True	ATTAAA	-18	NA	31514436	31569543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31569119
transcript_118896.nic	chr20	+	1513	11	NIC	ENSG00000101294.18	novel	1606	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	280.050281199645	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	-39	True	NA	48	True	ATTAAA	-42	NA	31514436	31569567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_118922.known	chr20	+	757	7	FSM	ENSG00000101294.18	ENST00000494153.5	757	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	357.911845136325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGCATCAGCATCGAA	1320	False	NA	NA	False	NA	NA	NA	31548780	31569174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31549115_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_118925.known	chr20	+	3932	3	FSM	ENSG00000101294.18	ENST00000498035.5	3932	3	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_2	16	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTTTTCTTAAATATTT	-19	True	NA	8	True	ATTAAA	-18	NA	31514456	31541733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178
transcript_118930.known	chr20	+	983	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	1	True	NA	12	True	ATTAAA	-19	NA	31605288	31606510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31605814_31606052
transcript_118931.known	chr20	+	1233	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTGACTTCTTGGGT	-5	True	NA	17	True	ATTAAA	-24	NA	31605282	31606515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31605300_31606500
transcript_118938.nnic	chr20	-	2481	3	NNC	ENSG00000171552.14	novel	2373	3	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	191	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	1356	False	NA	NA	False	AATAAA	-25	NA	31722586	31664451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_31666087_31721654_31722331_31722416
transcript_118940.known	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	109.5	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-10	True	NA	NA	False	AATAAA	-14	NA	31723529	31664462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31722617
transcript_118941.known	chr20	-	2544	3	FSM	ENSG00000171552.14	ENST00000678563.1	2544	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	178.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-36	True	NA	NA	False	AATAAA	-14	NA	31723978	31664462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31723734
transcript_118942.known	chr20	-	2426	3	FSM	ENSG00000171552.14	ENST00000439267.2	2426	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	187.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723989	31664462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31723863
transcript_118943.known	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	205	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-13	True	NA	NA	False	AATAAA	-14	NA	31722566	31664462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722349_31722443
transcript_118944.known	chr20	-	2574	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	126	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-1	True	NA	NA	False	AATAAA	-19	NA	31722868	31664457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722349_31722617
transcript_118945.known	chr20	-	2562	3	FSM	ENSG00000171552.14	ENST00000456404.6	2562	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	196	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-36	True	NA	NA	False	AATAAA	-14	NA	31723978	31664462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722349_31723734
transcript_118947.known	chr20	-	2227	3	FSM	ENSG00000171552.14	ENST00000422920.2	2227	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	82.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTAGGGTGGCCCTTGC	-10	True	NA	NA	False	GGGGCT	-26	NA	31723529	31665258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721843_31722331_31722617
transcript_118950.known	chr20	-	2496	3	FSM	ENSG00000171552.14	ENST00000376055.9	2496	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	66	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	969	False	NA	NA	False	AATAAA	-25	NA	31722973	31664451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721843_31722349_31722617
transcript_118951.known	chr20	-	2578	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	1345	False	NA	NA	False	AATAAA	-25	NA	31722597	31664451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654
transcript_118952.known	chr20	-	2373	3	FSM	ENSG00000171552.14	ENST00000677194.1	2373	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	206	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	4	True	NA	NA	False	AATAAA	-14	NA	31722549	31664462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31722476
transcript_118954.known	chr20	+	3605	19	FSM	ENSG00000088325.16	ENST00000340513.4	3605	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	286.555840980427	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTTGATGTTTTT	-27	True	NA	31	True	AATAAA	-25	NA	31739270	31801805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31780938_31781047_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_118958.known	chr20	+	3473	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_14	55.5342719707551	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	-8	True	NA	26	True	AATAAA	-20	NA	31739289	31801800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_118961.nnic	chr20	+	3509	18	NNC	ENSG00000088325.16	novel	3473	18	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_16	202.63438020613	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	147	False	NA	26	True	AATAAA	-20	NA	31739232	31801800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798385_31798553_31800969
transcript_118973.nnic	chr20	+	3389	17	NIC	ENSG00000088325.16	novel	3473	18	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	210.605525805948	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	-31	True	NA	26	True	AATAAA	-20	NA	31739266	31801800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_31739622_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_118984.nic	chr20	+	2234	14	ISM	ENSG00000088325.16	ENST00000300403.11	3473	18	-57	7794	-38	-7794	5prime_fragment	FALSE	canonical	3	846	junction_9	50.3580082418163	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGCAGAAAGGGGAGGT	147	False	NA	34	True	AATAAA	-2	NA	31739232	31794006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847
transcript_118988.nic	chr20	+	1821	12	ISM	ENSG00000088325.16	ENST00000300403.11	3473	18	-3	17983	-3	-17983	5prime_fragment	FALSE	canonical	3	846	junction_9	53.3502383676427	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAAAAGAATCCAGGAG	-11	True	NA	-19	True	NA	NA	NA	31739286	31783817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704
transcript_11899.known	chr1	+	3552	21	FSM	ENSG00000155363.19	ENST00000369645.6	3380	21	-172	0	66	0	multi-exon	FALSE	canonical	3	194	junction_1	122.387856832285	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	8	True	NA	32	True	AAGAAA	-33	NA	112674486	112700739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112674730_112674847_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_119005.known	chr20	-	1302	1	FSM	ENSG00000179772.8	ENST00000375978.5	1302	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGCTTGCCTGATGGC	-2	True	NA	NA	False	AATAAA	-16	NA	31845604	31844302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31844300_31845600
transcript_119006.known	chr20	-	1256	7	FSM	ENSG00000149599.16	ENST00000398084.6	1256	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.56580071972344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCCTCCCAGTCATTC	9482	False	NA	0	True	ATTAAA	-25	NA	31870280	31861066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31861676_31862570_31862743_31863906_31863982_31864952_31865003_31867070_31867154_31869563_31869598_31870047
transcript_119008.known	chr20	-	1224	7	FSM	ENSG00000149599.16	ENST00000339738.10	1224	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.3094010767585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCCGAGTGCCTC	-5	True	NA	-10	True	ATTAAA	-15	NA	31870527	31861076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31861676_31862570_31862743_31863906_31863982_31864952_31865003_31867070_31867154_31869563_31869598_31870316
transcript_119010.known	chr20	-	1651	6	FSM	ENSG00000149599.16	ENST00000486996.5	1651	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.5298221281347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCCTCCCAGTCATTC	21	True	NA	0	True	ATTAAA	-25	NA	31870225	31861066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31861676_31862570_31862743_31863906_31863982_31864952_31865003_31867070_31867154_31869563
transcript_119011.known	chr20	-	1957	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	31.1317763707759	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTTGTCCAGTGTGA	-22	True	NA	-2	True	AATAAA	-26	NA	31952046	31944336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
transcript_119014.nic	chr20	-	3589	4	NIC	ENSG00000088356.6	novel	1957	5	NA	NA	-28	-627	intron_retention	FALSE	canonical	3	345	junction_1	20.5426385841741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGCAGCAACTAGTCT	-50	True	NA	-15	True	AATAAA	-16	NA	31952074	31944963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_31945890_31946495_31948883_31950311_31950388_31951874
transcript_119015.nic	chr20	-	334	3	ISM	ENSG00000088356.6	ENST00000202017.6	1957	5	-28	4488	-28	-4488	5prime_fragment	FALSE	canonical	3	387	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGATTGAAAAAGGTA	-50	True	NA	-2	True	NA	NA	NA	31952074	31948824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_31948883_31950311_31950388_31951874
transcript_119018.nnic	chr20	+	1720	6	NNC	ENSG00000101331.17	novel	2599	10	NA	NA	7794	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.7911367545215	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGACTCAGTTTAC	7801	False	NA	11	True	AATAAA	-23	NA	32018243	32032180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_32018315_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000
transcript_119020.known	chr20	+	2599	10	FSM	ENSG00000101331.17	ENST00000452892.3	2599	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.429518080475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGACTCAGTTTAC	-5	True	NA	11	True	AATAAA	-23	NA	32010437	32032180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32010485_32014903_32015072_32017799_32017884_32017978_32018163_32018942_32019410_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000
transcript_119023.known	chr20	+	2160	14	FSM	ENSG00000101336.18	ENST00000262651.4	2160	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.24545449884071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAACGTTGGTTTTCCT	-3	True	NA	10	True	AATAAA	-23	NA	32052241	32101849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32052487_32054215_32054282_32071661_32071783_32073318_32073362_32073715_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_119025.known	chr20	+	1742	13	FSM	ENSG00000101336.18	ENST00000518730.5	1742	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	4.58863329931207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGACCAGGGCAGGG	16	True	NA	NA	False	NA	NA	NA	32052260	32101519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073718_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_119040.known	chr20	+	3768	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	39.534225897329	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	-12	True	NA	20	True	AATAAA	-17	NA	32109713	32167256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_119042.nnic	chr20	+	2087	18	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_17	69.294367322031	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTTTGTCTTGAATCT	-12	True	NA	17	True	AATAAA	-14	NA	32109713	32167253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32166972
transcript_119050.known	chr20	+	4032	18	FSM	ENSG00000101337.16	ENST00000217315.9	4032	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	72.1263309232956	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTGAATCTCATGC	10	True	NA	22	True	AATAAA	-19	NA	32109735	32167258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32110040_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_119059.nnic	chr20	+	3498	16	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_6	73.1244297223727	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	-1	True	NA	20	True	AATAAA	-17	NA	32109724	32167256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143078_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_119069.known	chr20	-	3884	1	FSM	ENSG00000235217.6	ENST00000565928.1	3884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATCATGTCACTTCCC	-17	True	NA	-23	True	AATAAA	-27	NA	32190360	32186476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32186500_32190400
transcript_119070.known	chr20	-	5656	3	FSM	ENSG00000126003.7	ENST00000246229.5	5656	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	10.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTGTGAACCTGTCT	-10	True	NA	-4	True	ATTAAA	-20	NA	32207743	32192503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32197683_32201918_32202293_32207640
transcript_119076.known	chr20	+	5226	7	FSM	ENSG00000101346.14	ENST00000375749.8	5226	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	7.36545993132812	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATTTTACCAGTCTAG	-21	True	NA	22	True	AATAAA	-42	NA	32207879	32238658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_119087.known	chr20	+	1507	5	FSM	ENSG00000101346.14	ENST00000375730.3	1507	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	57.2756492761104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTTCTATGTGCC	-8	True	NA	NA	False	AATAAA	-20	NA	32207892	32217923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32217007
transcript_119089.known	chr20	+	6116	9	FSM	ENSG00000101350.8	ENST00000375712.4	6116	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13.7658998979362	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCCTCATAAATGACTA	-1	True	NA	23	True	AATAAA	-31	NA	32277650	32335011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32277766_32309712_32311182_32316217_32316320_32316526_32316650_32316755_32316875_32326770_32326885_32327555_32327662_32330140_32330320_32331222
transcript_119091.known	chr20	-	5991	8	FSM	ENSG00000197183.15	ENST00000359676.9	5991	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	10.9339389246585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTTCCACTGTGTC	-1	True	NA	NA	False	AATAAA	-20	NA	32483471	32443058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32447817_32452235_32452438_32452883_32453007_32453303_32453496_32453575_32453762_32456117_32456396_32474600_32474743_32483361
transcript_119093.known	chr20	-	701	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	1474	False	NA	NA	False	AATAAA	-19	NA	32483582	32464779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32465118_32474600_32474743_32483361
transcript_119095.known	chr20	-	1343	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	124.036033071039	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGATCCAGTTG	11	True	NA	58	True	AATAAA	-13	NA	32743455	32702702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
transcript_119116.known	chr20	+	4336	23	FSM	ENSG00000088305.18	ENST00000328111.6	4336	23	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_5	298.86359142758	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	-2	True	NA	23	True	ATTAAA	-16	NA	32762384	32809356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535_32793596_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
transcript_119125.known	chr20	+	4237	22	FSM	ENSG00000088305.18	ENST00000353855.6	4237	22	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	490.875884299532	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	37	False	NA	23	True	ATTAAA	-16	NA	32762423	32809356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
transcript_119133.nic	chr20	+	4198	21	NIC	ENSG00000088305.18	novel	4336	23	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_20	457.894048880306	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	32762333	32809356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535_32793596_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32807761
transcript_119137.known	chr20	+	4048	20	FSM	ENSG00000088305.18	ENST00000348286.6	4048	20	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	605.32142053678	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	37	False	NA	23	True	ATTAAA	-16	NA	32762423	32809356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32807761
transcript_119154.nic	chr20	+	2268	10	ISM	ENSG00000088305.18	ENST00000328111.6	4336	23	-51	14991	-51	-13704	5prime_fragment	FALSE	canonical	3	1488	junction_5	99.6360042019617	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAACAGAAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32762333	32794365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535
transcript_119165.known	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1281	junction_3	132.653265654822	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	-14	True	NA	22	True	AATAAA	-20	NA	32819953	32850405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
transcript_119174.known	chr20	+	2131	1	FSM	ENSG00000260257.2	ENST00000569087.2	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGGTTCTGTGATT	507	False	NA	10	True	AATAAA	-20	NA	32856620	32858751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32856600_32858800
transcript_119179.nnic	chr20	-	1867	14	NNC	ENSG00000101391.21	novel	2164	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_13	90.5889996848697	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-18	True	NA	-15	True	ATTAAA	-21	NA	33401538	33358838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396853_33401427
transcript_119180.known	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_13	37.771502360014	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	1	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_119191.nic	chr20	-	1671	12	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	95.1987047623535	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-18	True	NA	-15	True	ATTAAA	-21	NA	33401538	33358838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33401427
transcript_119198.nic	chr20	-	1633	11	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	99.2520024986902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-15	True	NA	-15	True	ATTAAA	-21	NA	33401535	33358838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33401427
transcript_119211.known	chr20	-	2211	8	FSM	ENSG00000101400.6	ENST00000217381.3	2211	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	6.77630927178938	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGTCTGTGCCTTGGC	122	False	33443786	-3	True	AATAAA	-35	NA	33443763	33407956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33408600_33408700_33408889_33410134_33410332_33412295_33412427_33412574_33412783_33417718_33417924_33438840_33439027_33443310
transcript_119223.known	chr20	+	7617	12	FSM	ENSG00000078699.22	ENST00000375279.6	7617	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.3627372529654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAGCTGGAATGGGACC	7	True	NA	10	True	AATAAA	-21	NA	33490116	33650036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33490302_33573973_33574262_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
transcript_119227.known	chr20	+	7344	11	FSM	ENSG00000078699.22	ENST00000342704.11	7344	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	28.5874098162111	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCAAGCTGGAAT	-14	True	NA	4	True	AATAAA	-15	NA	33490095	33650030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
transcript_119241.nic	chr20	+	1618	5	ISM	ENSG00000078699.22	ENST00000342704.11	7344	11	-51	26031	-30	45	5prime_fragment	TRUE	canonical	3	112	junction_3	8.38152730712011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATCTGCCAAATGCCTT	NA	False	NA	NA	False	AAAAAG	-31	NA	33490044	33623999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114
transcript_119242.nic	chr20	+	1879	5	ISM	ENSG00000078699.22	ENST00000342704.11	7344	11	-51	25770	-30	306	5prime_fragment	FALSE	canonical	3	112	junction_3	8.38152730712011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTACAGTTGAATCTGA	NA	False	NA	NA	False	AGTAAA	-22	NA	33490044	33624260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114
transcript_119249.known	chr20	-	1942	13	FSM	ENSG00000125967.17	ENST00000375238.8	1942	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	18.9317120784736	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	NA	False	NA	-1	True	AATAAA	-18	NA	33674463	33657086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_119252.known	chr20	-	1373	13	FSM	ENSG00000125967.17	ENST00000485399.5	1373	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	29.8533452434099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTTTGTCACTTCA	19	True	NA	0	True	NA	NA	NA	33674389	33657636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660059_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_119261.nic	chr20	-	2181	12	NIC	ENSG00000125967.17	novel	1942	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	75	junction_9	16.8385625895634	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	NA	False	NA	-1	True	AATAAA	-18	NA	33674447	33657086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_119263.known	chr20	-	2009	12	FSM	ENSG00000125967.17	ENST00000246190.11	2009	12	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_6	19.4723792516222	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	-20	True	NA	-1	True	AATAAA	-18	NA	33674428	33657086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_119264.nic	chr20	-	1880	12	NIC	ENSG00000125967.17	novel	1942	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	12	junction_4	31.4695182440468	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	NA	False	NA	-1	True	AATAAA	-18	NA	33674455	33657086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659652_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_119291.known	chr20	-	827	9	FSM	ENSG00000125967.17	ENST00000478237.5	827	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_8	34.3545393652717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGACTTGGGCCTGGTGG	1602	False	NA	-93	True	NA	NA	NA	33662237	33657729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33662211
transcript_119300.known	chr20	-	1277	8	FSM	ENSG00000125967.17	ENST00000483813.5	1277	8	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_7	36.6054529226654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCCCTGCCTGGCTG	1420	False	NA	73	True	NA	NA	NA	33662419	33657563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659733_33659884_33660004_33660258_33660396_33662211
transcript_119308.known	chr20	+	2254	1	FSM	ENSG00000149609.6	ENST00000607738.1	2254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAGTCTTCTACCTGCA	1046	False	NA	NA	False	AATAAA	-23	NA	33663365	33665619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33663400_33665600
transcript_119309.known	chr20	-	2142	12	FSM	ENSG00000125967.17	ENST00000488489.5	2142	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.2915992183073	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTGCCTCCTGTCTCGC	-12	True	NA	-2	True	AATAAA	-17	NA	33674420	33657087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660396_33669374_33669473_33669686_33669713_33670683_33670782_33672397_33672423_33674223
transcript_119311.known	chr20	-	2690	7	FSM	ENSG00000101412.13	ENST00000343380.6	2690	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	101.639340589929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTATTCAGTGCTGCC	5	True	NA	NA	False	AGTAAA	-23	NA	33686385	33675476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33676980_33677104_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686003
transcript_119312.nnic	chr20	-	2213	7	NNC	ENSG00000101412.13	novel	2690	7	NA	NA	0	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.961287118313	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGGTTTTGGGACT	5	True	NA	-11	True	AATAAA	-15	NA	33686385	33675683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_33676980_33677104_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686273
transcript_119320.known	chr20	-	5690	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTGTATATATTTT	-42	True	NA	NA	False	AATAAA	-17	NA	33720310	33702757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
transcript_119323.known	chr20	-	989	3	FSM	ENSG00000101417.12	ENST00000344022.7	989	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCTAGATTCCCAC	NA	False	NA	NA	False	TTTAAA	-38	NA	33720319	33707268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33707970_33714673_33714737_33720094
transcript_119326.known	chr20	+	3661	15	FSM	ENSG00000131061.14	ENST00000342427.6	3661	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	13.4998110342028	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	2066	False	NA	9	True	AATAAA	-19	NA	33731656	33792269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757323_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
transcript_119327.known	chr20	+	3343	15	FSM	ENSG00000131061.14	ENST00000375200.6	3343	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	15.3981180933362	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	3	True	NA	9	True	AATAAA	-19	NA	33731995	33792269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757344_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
transcript_119331.known	chr20	+	1602	5	FSM	ENSG00000101421.4	ENST00000217402.3	1602	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTTGTGTTTAATC	22	True	NA	32	True	ATTAAA	-21	NA	33811347	33854366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33811659_33848466_33848645_33850951_33851067_33852076_33852204_33853495
transcript_119342.nic	chr20	+	1992	11	NIC	ENSG00000125970.12	novel	6213	10	NA	NA	-20	2581	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	539.529202175378	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGAGATGGGATGG	1785	False	NA	20	True	AATAAA	-16	NA	33993625	34080261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_33994132_34031521_34031605_34065043_34065161_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_119360.known	chr20	+	6213	10	FSM	ENSG00000125970.12	ENST00000246194.8	6213	10	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_5	124.939985593084	3928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	-5	True	NA	17	True	AATAAA	-21	NA	33993910	34084884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_119378.known	chr20	+	6430	9	FSM	ENSG00000125970.12	ENST00000375114.7	6430	9	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	386.022910589514	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	-5	True	NA	17	True	AATAAA	-21	NA	33993645	34084884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_119383.nnic	chr20	+	2026	9	NIC	ENSG00000125970.12	novel	6213	10	NA	NA	-254	2581	combination_of_known_splicesites	FALSE	canonical	3	199	junction_1	407.231180504391	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGAGATGGGATGG	1551	False	NA	20	True	AATAAA	-16	NA	33993391	34080261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_33994132_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_119401.known	chr20	-	2556	9	FSM	ENSG00000125977.7	ENST00000374980.3	2556	9	0	0	0	0	multi-exon	FALSE	canonical	3	3441	junction_8	398.939042179379	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGCTCCATTGCTTTTG	-14	True	NA	-10	True	AATAAA	-26	NA	34112243	34088308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_119404.nic	chr20	-	571	4	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-55	10239	-55	-10239	5prime_fragment	FALSE	canonical	3	3441	junction_3	345.372262927989	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATGTTAAGTTCCCAG	NA	False	NA	NA	False	AATAAA	-12	NA	34112298	34098547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34098634_34103461_34103566_34105367_34105546_34112095
transcript_119406.nic	chr20	-	448	3	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-55	15190	-55	-15190	5prime_fragment	FALSE	canonical	3	3441	junction_2	73.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATATTGATGAAG	NA	False	NA	NA	False	AAAAAG	-18	NA	34112298	34103498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34103566_34105367_34105546_34112095
transcript_119414.nnic	chr20	-	1866	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	303	junction_1	447.386812501218	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	8371	False	NA	-4	True	AATAAA	-18	NA	34303447	34280267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_34280651_34281026_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_119423.known	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_6	121.566117761712	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-2	True	NA	-4	True	AATAAA	-18	NA	34303355	34280267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_119430.known	chr20	-	2211	9	FSM	ENSG00000101444.13	ENST00000480653.5	2211	9	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_5	128.508693772056	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTTGAGCCTTTATT	8501	False	NA	-6	True	AATAAA	-16	NA	34303317	34280269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_119442.known	chr20	+	6743	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	6.73287436554569	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	-18	True	NA	NA	False	NA	NA	NA	34363272	34511773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_119445.known	chr20	+	205	2	FSM	ENSG00000078747.16	ENST00000479215.1	205	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGAGAGCAGTGTTG	4	True	NA	NA	False	NA	NA	NA	34363294	34369543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34363350_34369393
transcript_119448.known	chr20	+	662	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	110.091880818806	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	10	True	NA	27	True	ACTAAA	-18	NA	34516421	34540958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
transcript_11945.known	chr1	+	3383	20	FSM	ENSG00000155363.19	ENST00000357443.2	3383	20	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_4	98.5213111639436	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAACAAAATCTTGTTC	11	False	NA	3	True	AAGAAA	-4	NA	112674744	112700710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_119450.nic	chr20	+	2266	3	ISM	ENSG00000125971.17	ENST00000357156.7	662	4	-12	4193	-4	-4193	5prime_fragment	FALSE	canonical	3	611	junction_1	118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGCCGGGAACAGTCCC	-2	True	NA	NA	False	NA	NA	NA	34516409	34536765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_34516462_34526267_34526344_34534627
transcript_119452.known	chr20	+	964	4	FSM	ENSG00000101460.13	ENST00000360668.8	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	6.59966329107444	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	-8	True	NA	16	True	AATAAA	-22	NA	34558717	34560345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735
transcript_119456.known	chr20	+	851	3	FSM	ENSG00000101460.13	ENST00000476428.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	63.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	19	False	NA	16	True	AATAAA	-22	NA	34558774	34560345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34558909_34559346_34559454_34559735
transcript_119457.known	chr20	+	698	5	FSM	ENSG00000101460.13	ENST00000397709.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	51.7010638188423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	-8	True	NA	16	True	AATAAA	-22	NA	34558717	34560345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735_34559906_34560171
transcript_119460.known	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_9	13.3627086876529	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	9	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_119461.known	chr20	-	1248	11	FSM	ENSG00000101464.11	ENST00000374820.6	1248	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	60.0400699533237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGGCACAGGGCTG	16	True	NA	NA	False	NA	NA	NA	34677085	34560865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34657179_34657245_34676955
transcript_119475.known	chr20	+	2885	18	FSM	ENSG00000131069.20	ENST00000360596.7	2885	18	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_9	9.66354402095746	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTGACTTGTTTTCT	-1	True	NA	15	True	AATAAA	-15	NA	34876611	34927959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34876824_34882793_34882990_34913095_34913188_34913392_34913497_34913752_34913826_34914095_34914172_34914322_34914438_34919434_34919573_34920538_34920710_34921005_34921140_34921329_34921463_34921543_34921601_34921785_34921867_34923322_34923432_34925697_34925767_34926104_34926282_34926876_34926952_34927086
transcript_119504.known	chr20	-	2638	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	30.0170869706586	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-15	True	NA	-5	True	ATTAAA	-18	NA	34872856	34844719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
transcript_119571.known	chr20	+	1527	6	FSM	ENSG00000131069.20	ENST00000476922.5	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	41.0706708004629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGACTTGTTTTCTTAG	9	False	NA	18	True	AATAAA	-18	NA	34876621	34927962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34876824_34882793_34882990_34923322_34923432_34925697_34925767_34926876_34926952_34927086
transcript_119575.nic	chr20	-	1527	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	-4	15918	-4	2176	5prime_fragment	FALSE	canonical	3	142	junction_3	3.74165738677394	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGGTTGGTGAAATCC	12	False	34872872	NA	False	NA	NA	NA	34872860	34860637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
transcript_119608.known	chr20	-	3138	19	FSM	ENSG00000100991.12	ENST00000451813.6	3138	19	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_11	168.993936628756	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021333_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_119610.known	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_11	116.141264027375	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_119680.known	chr20	-	1437	13	FSM	ENSG00000100983.12	ENST00000643443.1	1437	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	69.2308437202828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATCCTCTGTATTTGT	25	True	NA	NA	False	NA	NA	NA	34955755	34928805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946052_34951723_34951861_34955726
transcript_119681.known	chr20	-	1909	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	36.0262250157977	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTCCTTACTTCGTG	-26	True	NA	-2	True	AATAAA	-19	NA	34955806	34928431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_119682.known	chr20	-	1940	13	FSM	ENSG00000100983.12	ENST00000643188.1	1940	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	74.4533784025651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTCCCTAATTCTGCC	NA	False	NA	-49	True	NA	NA	NA	34956027	34928478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955869
transcript_119685.known	chr20	-	2131	13	FSM	ENSG00000100983.12	ENST00000642498.1	2131	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	72.8169317916895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	-3	True	NA	-43	True	NA	NA	NA	34955783	34928472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34929238_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_119690.nic	chr20	-	2228	12	NIC	ENSG00000100983.12	novel	1909	13	NA	NA	-15	0	intron_retention	FALSE	canonical	3	179	junction_1	37.5365386728344	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	NA	False	NA	-3	True	AATAAA	-18	NA	34955823	34928432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34943007_34945952_34946099_34951723_34951861_34955726
transcript_119700.nic	chr20	-	2371	12	NIC	ENSG00000100983.12	novel	2131	13	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	187	junction_1	32.8392025350875	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGATGATTCCTTACTT	NA	False	NA	-6	True	AATAAA	-15	NA	34955823	34928435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_119717.nnic	chr20	-	1968	12	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	-33	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_5	77.5653283709239	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-50	True	NA	-23	True	AATAAA	-19	NA	35147369	35115363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134104_35134156_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_119723.known	chr20	-	1884	11	FSM	ENSG00000088298.13	ENST00000374492.8	1884	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	26.6315602246658	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-17	True	NA	-23	True	AATAAA	-19	NA	35147336	35115363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_119729.nnic	chr20	-	1940	11	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	62.4032050458949	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTATCATGTTTT	-50	True	NA	-25	True	AATAAA	-17	NA	35147369	35115365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_35115959_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_119731.known	chr20	-	1756	10	FSM	ENSG00000088298.13	ENST00000374491.3	1756	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	65.665820637528	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	0	True	NA	-23	True	AATAAA	-19	NA	35147319	35115363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35147151
transcript_119734.nnic	chr20	-	1705	10	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-33	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_5	65.493756181528	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-50	True	NA	-23	True	AATAAA	-19	NA	35147369	35115363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_119739.nnic	chr20	-	1793	10	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-33	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	65.7060419643223	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTATCATGTTTT	-50	True	NA	-25	True	AATAAA	-17	NA	35147369	35115365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35115934_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_119745.nnic	chr20	-	1563	9	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	63.4069199693535	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-50	True	NA	-23	True	AATAAA	-19	NA	35147369	35115363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_119756.nnic	chr20	-	1437	8	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	70.0017492492808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-50	True	NA	-23	True	AATAAA	-19	NA	35147369	35115363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_119770.known	chr20	-	1054	7	FSM	ENSG00000242372.9	ENST00000675032.1	1054	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	572.551429034012	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	7706	False	NA	-12	True	ATTAAA	-32	NA	35284717	35278906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284696
transcript_119771.known	chr20	-	1069	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	0	0	0	multi-exon	FALSE	canonical	3	1248	junction_6	144.77731943306	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATGTGATGTTTGGG	1	True	NA	-23	True	ATTAAA	-21	NA	35284772	35278917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
transcript_119780.known	chr20	-	932	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	546.285273460671	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	7619	False	NA	-16	True	ATTAAA	-28	NA	35284804	35278910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
transcript_119784.known	chr20	-	1017	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	598.255380251611	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	3	True	NA	-16	True	ATTAAA	-28	NA	35284770	35278910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
transcript_119789.known	chr20	+	1349	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	2.86744175568088	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	-11	True	NA	14	True	AATAAA	-19	NA	35172071	35177362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
transcript_119793.known	chr20	-	798	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	767.053380729717	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	9	True	NA	-16	True	ATTAAA	-28	NA	35284523	35278910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
transcript_119795.known	chr20	-	1499	3	FSM	ENSG00000126005.17	ENST00000435366.2	1499	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTATAAAACACTGTACAAA	7696	False	NA	-24	True	AATAAA	-12	NA	35278027	35276360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35277298_35277389_35277933_35278008
transcript_119799.known	chr20	-	1695	2	FSM	ENSG00000126005.17	ENST00000456790.2	1695	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTACAAACCTATGAAT	-10	True	NA	-15	True	AATAAA	-21	NA	35278122	35276351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35277933_35278008
transcript_119800.known	chr20	-	867	2	FSM	ENSG00000126005.17	ENST00000424358.1	867	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGGAGGCTATCTGA	-17	True	NA	NA	False	NA	NA	NA	35278129	35277149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35277933_35278045
transcript_119805.known	chr20	-	1252	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1371	junction_3	110.694895997964	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	7708	False	NA	-16	True	ATTAAA	-28	NA	35284715	35278910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
transcript_119814.known	chr20	-	2267	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	24.4621148253456	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	8	True	NA	-15	True	AATAAA	-20	NA	35411973	35302577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_119815.known	chr20	-	736	10	FSM	ENSG00000101019.22	ENST00000438533.5	736	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	102.044047618276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGAACCTTCTTCAAC	12	True	NA	NA	False	NA	NA	NA	35411969	35306742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35392235_35392278_35394091_35394197_35411939
transcript_119819.known	chr20	-	758	9	FSM	ENSG00000101019.22	ENST00000424405.5	758	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	73.0315642376637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGAGCATCCTGAAG	8	True	NA	NA	False	NA	NA	NA	35411973	35303990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35394091_35394197_35411939
transcript_119821.known	chr20	-	2188	9	FSM	ENSG00000101019.22	ENST00000349714.9	2188	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	84.2309882109904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	18	True	NA	-3	True	AATAAA	-32	NA	35411963	35302565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35381925_35382026_35384037_35384134_35394091_35394197_35411939
transcript_119823.nic	chr20	-	4881	9	NIC	ENSG00000101019.22	novel	2267	10	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	224	junction_3	22.8497127990704	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCTCCTGGAATGGAT	-13	True	NA	-18	True	AATAAA	-17	NA	35411994	35302580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_119828.known	chr20	-	2133	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	80.8596667955398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	1184	False	NA	-3	True	AATAAA	-32	NA	35412031	35302565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
transcript_119834.known	chr20	-	990	8	FSM	ENSG00000101019.22	ENST00000491125.5	990	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	91.8732489767888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGAAGCCCAGCTGGC	5	True	NA	NA	False	NA	NA	NA	35411976	35346019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35346424_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_119835.known	chr20	-	1035	7	FSM	ENSG00000101019.22	ENST00000453855.5	1035	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	94.8784309875889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTTAGAAACTTGCCTG	1255	False	NA	6	True	ATTAAA	-43	NA	35411960	35303432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314708_35381983_35382026_35384037_35384134_35394091_35394197_35411939
transcript_119836.known	chr20	-	1987	7	FSM	ENSG00000101019.22	ENST00000457259.5	1987	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	84.1462021325581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	1257	False	NA	-3	True	AATAAA	-32	NA	35411958	35302565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35394091_35394197_35411939
transcript_119837.known	chr20	-	3638	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	22.573337271116	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGAATTCTTTTTTA	7	True	NA	1	True	AATAAA	-34	NA	35411974	35344109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_119846.nic	chr20	+	3004	17	ISM	ENSG00000126001.16	ENST00000397527.6	15434	35	-494	41214	-60	0	5prime_fragment	FALSE	canonical	3	11	junction_1	9.03379073257733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGGAAGAAATTCAA	NA	False	NA	NA	False	GGGGCT	-32	NA	35455103	35478066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870
transcript_119854.nic	chr20	+	2777	16	NIC	ENSG00000126001.16	novel	15434	35	NA	NA	59	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	10.1499863163564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGGAAGAAATTCAA	85	False	NA	NA	False	GGGGCT	-32	NA	35455259	35478066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_35455752_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870
transcript_119858.known	chr20	+	1419	10	FSM	ENSG00000126001.16	ENST00000397524.5	1419	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	9.59681016963964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	126	False	NA	7	True	AATAAA	-20	NA	35455723	35470132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_119866.known	chr20	+	1235	14	FSM	ENSG00000125991.21	ENST00000416206.5	1235	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	389.13639780246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCCCCCAGCCTCT	34	False	NA	-53	True	NA	NA	NA	35542101	35557546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35549162_35549208_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_119869.known	chr20	+	1302	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_1	98.3413485433942	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	10	True	NA	35	True	GATAAA	-24	NA	35542077	35557634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_119874.nic	chr20	+	2049	12	NIC	ENSG00000125991.21	novel	1302	13	NA	NA	-7	0	intron_retention	FALSE	canonical	3	787	junction_1	102.314375358298	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTGGTCTCCGTGTGA	NA	False	NA	34	True	GATAAA	-23	NA	35542030	35557633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35557110_35557193_35557250_35557424
transcript_119884.known	chr20	-	1818	7	FSM	ENSG00000088340.17	ENST00000616283.4	1818	7	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_4	6.04611904907235	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGATCACGTGCTATAC	NA	False	NA	-16	True	AATAAA	-18	NA	35564540	35558736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35559053_35559155_35559257_35559340_35559628_35560122_35560365_35560539_35560639_35561851_35561938_35563853
transcript_119895.known	chr20	-	2147	18	FSM	ENSG00000214078.13	ENST00000352393.8	2147	18	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_15	259.563834312573	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	47	False	NA	-2	True	AATAAA	-30	NA	35664886	35626030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35655201_35655345_35658929_35658983_35664759
transcript_119912.known	chr20	-	1952	16	FSM	ENSG00000214078.13	ENST00000397443.7	1952	16	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_15	125.553813163918	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	4	True	NA	-15	True	AATAAA	-17	NA	35664900	35626043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
transcript_119913.nic	chr20	-	1947	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	339	junction_15	143.279586822408	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-4	True	NA	-15	True	AATAAA	-17	NA	35664937	35626043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_119919.known	chr20	-	1695	16	FSM	ENSG00000214078.13	ENST00000397442.5	1695	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	231.755292400315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGACCAGTGAAGACC	58	False	NA	-37	True	NA	NA	NA	35664875	35626065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35626382_35626734_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_119952.known	chr20	-	3008	13	FSM	ENSG00000244005.13	ENST00000374092.9	3008	13	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_9	33.1620599815847	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGGCTGGGTGTG	-4	True	NA	NA	False	ATTAAA	-19	NA	35699352	35668051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_119953.known	chr20	-	1956	13	FSM	ENSG00000244005.13	ENST00000397425.5	1956	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	44.1992804114376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCACCTTCTATTTACT	-1	True	NA	-30	True	NA	NA	NA	35699349	35668982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_119960.known	chr20	-	1436	12	FSM	ENSG00000244005.13	ENST00000541387.5	1436	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	44.5389605656044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTTCCCTAGCT	-4	True	NA	NA	False	NA	NA	NA	35699352	35669470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_119971.known	chr20	-	1755	16	FSM	ENSG00000214078.13	ENST00000437340.5	1755	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	251.773672615352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCTAGGTTCCCTTG	NA	False	NA	-129	True	NA	NA	NA	35664956	35626251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35626382_35626566_35626801_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_119978.known	chr20	+	350	3	FSM	ENSG00000125995.16	ENST00000374072.5	350	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	898.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTGTCCCTCTCTTA	40	False	NA	14	True	AATAAA	-15	NA	35699441	35700978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699457_35699632_35699764_35700774
transcript_119979.known	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1807	junction_1	954.5	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	3	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699457_35699632_35699764_35700797
transcript_119980.known	chr20	+	288	3	FSM	ENSG00000125995.16	ENST00000397416.1	288	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1848.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCCAACTACATCTGTC	-3	True	NA	-54	True	NA	NA	NA	35699450	35700910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699495_35699632_35699764_35700797
transcript_119981.known	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	4	True	NA	-8	True	ATTAAA	-17	NA	35664900	35650325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35658983_35664759
transcript_119982.known	chr20	-	6646	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	63.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	4	True	NA	1	True	AATAAA	-32	NA	35664900	35648924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35659015_35664759
transcript_119983.known	chr20	-	1068	3	FSM	ENSG00000244462.8	ENST00000424458.5	1068	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	256.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTGAAGCCACTCCC	15	True	NA	NA	False	NA	NA	NA	35664889	35654449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35659015_35664801
transcript_119984.known	chr20	-	565	3	FSM	ENSG00000244462.8	ENST00000435161.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACCACTTCTGTTCA	-1	True	NA	NA	False	NA	NA	NA	35664934	35654920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35659015_35664878
transcript_119989.known	chr20	+	496	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	3716	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	-3	True	NA	16	True	AATAAA	-17	NA	35699450	35700980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699764_35700797
transcript_119998.known	chr20	-	3131	19	FSM	ENSG00000131051.24	ENST00000656873.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_18	450.266162712623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACTGTATTAAGGGG	21	False	35742287	NA	False	ATTAAA	-10	NA	35742266	35703223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940_35742114_35742244
transcript_119999.known	chr20	-	2124	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	383.833675773035	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-8	True	NA	-3	True	AATAAA	-15	NA	35742248	35704325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_12.known	ERCC-00039	+	724	1	FSM	ERCC-00039A	DQ883656	724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00039_+_0_700
transcript_120000.known	chr20	-	2883	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	371.052118630907	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	13	False	NA	-8	True	AATAAA	-17	NA	35742274	35703610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_120009.known	chr20	-	2831	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	260.330919216293	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGATCTTCATTTTTC	NA	False	NA	-7	True	AATAAA	-18	NA	35742312	35703609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_120013.known	chr20	-	5060	17	FSM	ENSG00000131051.24	ENST00000253363.11	5060	17	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_5	236.213084086699	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCAACCTGGGCGAC	-20	True	NA	NA	False	NA	NA	NA	35742260	35701346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_120025.known	chr20	-	4580	16	FSM	ENSG00000131051.24	ENST00000463004.5	4580	16	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_5	228.999524502175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	4	True	NA	-6	True	AATAAA	-19	NA	35742236	35703608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35740888_35741940
transcript_120026.known	chr20	-	2421	16	FSM	ENSG00000131051.24	ENST00000528062.7	2421	16	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	392.474859775191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTCTTAAAATTCCAAA	2	True	NA	NA	False	NA	NA	NA	35742238	35703897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_120036.known	chr20	-	1026	9	FSM	ENSG00000131051.24	ENST00000374038.7	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	405.071212874971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTGCAGCAATGGCAA	-18	True	NA	-29	True	NA	NA	NA	35742258	35721866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35721878_35724569_35724723_35725037_35725156_35729311_35729363_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_120039.known	chr20	-	1068	5	FSM	ENSG00000131051.24	ENST00000453310.5	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	508.430612276641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTTACTTTTTACCTT	-18	True	NA	NA	False	NA	NA	NA	35742258	35734518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35735082_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_120046.nic	chr20	-	559	4	ISM	ENSG00000131051.24	ENST00000453310.5	1068	5	-54	4449	0	135	5prime_fragment	FALSE	canonical	3	335	junction_1	472.949139854265	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTAAGAAGGGGCT	NA	False	NA	0	True	NA	NA	NA	35742312	35738967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_35739018_35740524_35740598_35740823_35740888_35741940
transcript_120048.known	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	564.443285213158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	13	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
transcript_120053.known	chr20	-	861	3	FSM	ENSG00000131051.24	ENST00000461849.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAATTAGGCCCTAC	2	True	NA	NA	False	NA	NA	NA	35742238	35740098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35740598_35740823_35740888_35741940
transcript_120058.known	chr20	+	1814	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	94.5670429898001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	-11	True	NA	NA	False	AAAAAG	-14	NA	35772025	35913335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_120059.nic	chr20	+	1795	11	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-50	37035	-9	0	5prime_fragment	FALSE	canonical	3	191	junction_10	31.4229215700896	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	2649	False	NA	NA	False	AAAAAG	-14	NA	35771964	35913335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_120062.nic	chr20	+	1708	10	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-50	50722	-9	123	5prime_fragment	FALSE	canonical	3	210	junction_7	24.9508158158515	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATCTTCATTCTTCA	2649	False	NA	NA	False	NA	NA	NA	35771964	35899648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369
transcript_120071.nic	chr20	+	1006	7	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-50	80882	-9	-1632	5prime_fragment	FALSE	canonical	3	242	junction_5	17.3565549577098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAATATCAAAAGGA	2649	False	NA	NA	False	NA	NA	NA	35771964	35869488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437
transcript_120078.known	chr20	+	618	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	-4	True	NA	12	True	AATAAA	-22	NA	35772032	35775058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35772080_35774487
transcript_120079.known	chr20	+	5879	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	29.2432821374929	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	-22	True	NA	7	True	AATAAA	-18	NA	35772014	35950370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
transcript_120082.known	chr20	-	771	2	FSM	ENSG00000171222.11	ENST00000305978.7	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	0	964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTGTGTCTCTT	-7	True	NA	-7	True	AATGAA	-21	NA	35954502	35953623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35954340_35954447
transcript_120083.known	chr20	+	662	1	FSM	ENSG00000149646.12	ENST00000614708.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	-1	True	NA	5	True	AATAAA	-17	NA	35954706	35955368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35954700_35955400
transcript_120112.nic	chr20	+	3271	19	NIC	ENSG00000088367.23	novel	8418	25	NA	NA	-108	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_13	30.8260752218028	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAGCTGACATTCT	-46	True	NA	2	True	AATAAA	-11	NA	36154631	36230327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_120127.known	chr20	+	2561	5	FSM	ENSG00000131043.13	ENST00000680247.1	2561	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	119.321781330988	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	18	True	NA	17	True	ATTAAA	-7	NA	36236477	36256921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236504_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_120129.known	chr20	+	3187	5	FSM	ENSG00000131043.13	ENST00000680639.1	3187	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	120.110365914021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	3501	False	NA	17	True	ATTAAA	-7	NA	36236130	36256921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236783_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_120130.known	chr20	+	2417	4	FSM	ENSG00000131043.13	ENST00000320849.9	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	45.2842871939779	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	18	True	NA	29	True	ATTAAA	-19	NA	36236477	36256933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36255577
transcript_120131.known	chr20	+	2689	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	115.034294403403	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	25	True	NA	29	True	ATTAAA	-19	NA	36236484	36256933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
transcript_120132.known	chr20	+	2863	4	FSM	ENSG00000131043.13	ENST00000680811.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	116.448367194316	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACAATCCCCTTGT	24	True	NA	18	True	ATTAAA	-8	NA	36236483	36256922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236967_36239820_36240626_36244696_36244927_36255577
transcript_120135.known	chr20	+	1412	2	FSM	ENSG00000131043.13	ENST00000681771.1	1412	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTTCCTTTTTTTCTG	18	True	NA	NA	False	TTTAAA	-13	NA	36236477	36241206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236504_36239820
transcript_120139.known	chr20	+	2952	4	FSM	ENSG00000131043.13	ENST00000679667.1	2952	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	109.849391845785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	5	True	NA	17	True	ATTAAA	-7	NA	36236464	36256921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36237038_36239820_36240626_36244696_36244927_36255577
transcript_120140.known	chr20	+	2490	5	FSM	ENSG00000131043.13	ENST00000680412.1	2490	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	107.515987183302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTCGAGTTGAGACAAT	4	True	NA	10	True	NA	NA	NA	36236463	36256914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36246200_36246279_36255577
transcript_120141.known	chr20	+	5058	13	FSM	ENSG00000080845.19	ENST00000339266.10	5058	13	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	211.061256905825	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGCTTGTGGCATTAT	-3	True	NA	23	True	AATAAA	-15	NA	36306338	36528633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36306513_36367044_36367276_36431645_36432717_36436108_36436351_36439753_36439869_36442726_36442778_36446696_36446938_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_120156.known	chr20	+	3110	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	47.8249121507005	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	6	True	NA	27	True	AATAAA	-19	NA	36461337	36528637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_120170.known	chr20	+	2786	4	FSM	ENSG00000101335.10	ENST00000279022.7	2786	4	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	43.7442059655397	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGCAGCATATTTAACA	-6	True	NA	15	True	ATTAAA	-25	NA	36541518	36551447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36541562_36544858_36545069_36548031_36548194_36549076
transcript_120173.known	chr20	+	1024	3	FSM	ENSG00000101335.10	ENST00000346786.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	400	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGTGTCTGTGGCT	1	True	NA	29	True	AATAGA	-18	NA	36541496	36549825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36541562_36544858_36545069_36549076
transcript_120175.known	chr20	+	918	5	FSM	ENSG00000259399.1	ENST00000558530.1	918	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	525.077137190337	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTCTCCATCGGGTG	19	True	NA	8	True	ATTAAA	-8	NA	36574552	36612384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36574636_36578740_36578967_36607714_36607819_36609600_36609731_36612009
transcript_120177.known	chr20	+	1170	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	529.512275589528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	12	True	NA	36	True	AATAAA	-20	NA	36605788	36612557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
transcript_120180.known	chr20	+	1301	4	FSM	ENSG00000118707.11	ENST00000650844.1	1301	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	187.405087088549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTATGTTGGGTCC	104	False	NA	NA	False	NA	NA	NA	36573722	36591772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36573746_36576214_36576404_36578740_36578967_36590909
transcript_120181.nnic	chr20	+	3164	4	NNC	ENSG00000118707.11	novel	3416	3	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_3	166.525940588513	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	117	False	NA	38	True	AATAAA	-28	NA	36573583	36593950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_36573746_36578740_36578967_36590909_36592685_36592949
transcript_120186.known	chr20	+	1044	4	FSM	ENSG00000101084.19	ENST00000492721.5	1044	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	518.868641051535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	8	True	NA	36	True	AATAAA	-20	NA	36605784	36612557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36612009
transcript_120188.known	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_2	42.4970587217516	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	2	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
transcript_12019.known	chr1	+	4689	18	FSM	ENSG00000155363.19	ENST00000468624.5	4689	18	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	153.25914909723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTATGCAAAAGCCTTGA	20	False	NA	19	True	AAGAAA	-20	NA	112674719	112700726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112674730_112674831_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112699811_112699893_112700341_112700415
transcript_120195.known	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	90	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	-22	True	NA	38	True	AATAAA	-28	NA	36573596	36593950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36573746_36578740_36578967_36590909
transcript_120198.known	chr20	+	3432	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	198.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	21	False	NA	38	True	AATAAA	-28	NA	36573487	36593950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36573653_36578740_36578967_36590909
transcript_120201.nnic	chr20	+	3497	3	NNC	ENSG00000118707.11	novel	659	3	NA	NA	104	0	intron_retention	FALSE	canonical	3	13	junction_1	197	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	208	False	NA	38	True	AATAAA	-28	NA	36573826	36593950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_36574057_36578740_36578967_36590909
transcript_120202.known	chr20	+	3344	3	FSM	ENSG00000118707.11	ENST00000611732.4	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	123.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	20	True	NA	33	True	AATAAA	-23	NA	36574553	36593945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36574636_36578740_36578967_36590909
transcript_120205.known	chr20	+	923	3	FSM	ENSG00000118707.11	ENST00000560025.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	203.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATCTGCCAAGAAGGGT	138	False	NA	NA	False	NA	NA	NA	36574671	36591429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36574849_36578740_36578967_36590909
transcript_120207.known	chr20	+	896	3	FSM	ENSG00000101084.19	ENST00000342422.3	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	-4	True	NA	36	True	AATAAA	-20	NA	36605821	36612557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36612009
transcript_120211.known	chr20	-	2971	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_7	18.7988179297411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGCTGGTGTTATTT	-3	True	NA	-5	True	AATAAA	-22	NA	36746090	36651770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
transcript_120213.known	chr20	-	2917	15	FSM	ENSG00000101079.21	ENST00000359675.6	2917	15	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_13	52.6292384012336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	20	True	NA	0	True	AATAAA	-27	NA	36746067	36651765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36721678_36721784_36746044
transcript_120215.known	chr20	-	2075	12	FSM	ENSG00000149636.16	ENST00000473615.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	71.3320717686646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-29	True	NA	-3	True	ATTAAA	-19	NA	36773797	36751794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770975_36771114_36771194_36771424_36771474_36773661
transcript_120218.known	chr20	-	2441	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	65.371935874655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAGTGTATAAACAA	17	True	NA	1	True	ATTAAA	-23	NA	36773751	36751790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
transcript_120219.known	chr20	-	2181	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.2376577553945	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	5	True	NA	-3	True	ATTAAA	-19	NA	36773763	36751794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
transcript_120226.known	chr20	-	2129	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	68.8930106293828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	8	True	NA	-3	True	ATTAAA	-19	NA	36773760	36751794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
transcript_120227.known	chr20	-	2447	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.6409965695527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-30	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
transcript_120228.known	chr20	-	1915	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	70.0238054759475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	9837	False	NA	-3	True	ATTAAA	-19	NA	36773818	36751794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
transcript_12023.known	chr1	-	2474	11	FSM	ENSG00000155367.16	ENST00000464951.1	2474	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	86.5887406075409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTCTGTATTTGCT	18	True	NA	NA	False	AATAAA	-14	NA	112715291	112709997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112712804_112712920_112713032_112713496_112713612_112714057
transcript_120240.known	chr20	-	14218	15	FSM	ENSG00000149639.15	ENST00000237536.9	14218	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.72498997414682	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTGTGGACTTGGCC	-5	True	NA	-12	True	AATAAA	-15	NA	36863538	36777446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36786638_36793248_36794600_36796881_36796953_36797501_36797574_36802855_36803108_36804734_36804903_36805852_36805958_36808512_36808744_36809981_36810108_36812703_36812845_36815125_36816308_36817406_36817470_36829053_36829213_36839216_36839442_36862657
transcript_120242.known	chr20	-	4649	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	21.0643458637259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	7	True	NA	-28	True	AATAAA	-15	NA	36951708	36890228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_120245.known	chr20	-	4680	16	FSM	ENSG00000101347.11	ENST00000645033.1	4680	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	43.3479975187884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAAAGCTTCGTGAATA	1	True	NA	-50	True	ATTAAA	-37	NA	36951714	36890250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917097_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_120247.known	chr20	-	4334	15	FSM	ENSG00000101347.11	ENST00000262878.5	4334	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	43.6004587131833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCGCTTGAATCCGGGA	-1	True	NA	NA	False	NA	NA	NA	36951843	36890573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36893067_36897821_36897960_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_120256.known	chr20	+	2227	17	FSM	ENSG00000118705.17	ENST00000237530.11	2227	17	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_1	265.531535026915	863	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	-3	True	NA	13	True	AATAAA	-18	NA	37179329	37241619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37241302
transcript_12028.nic	chr1	-	2635	10	NIC	ENSG00000155367.16	novel	2474	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	44	junction_9	62.726921386807	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTCTGTATTTGCT	-26	True	NA	NA	False	AATAAA	-14	NA	112715335	112709997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714057
transcript_120296.known	chr20	+	1539	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	169.977204353996	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	14	True	NA	21	True	AATAAA	-21	NA	37289662	37317260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
transcript_120298.nnic	chr20	+	1331	4	NIC	ENSG00000101363.13	novel	1539	5	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_1	145.749404420357	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	NA	False	NA	21	True	AATAAA	-21	NA	37289631	37317260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_37289687_37298762_37298880_37301207_37301414_37316307
transcript_12030.known	chr1	-	1863	10	FSM	ENSG00000155367.16	ENST00000309276.11	1714	10	-145	-4	-145	0	multi-exon	FALSE	canonical	3	192	junction_9	20.4746154186888	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTATTTGCTTTGA	-2	True	NA	NA	False	AATAAA	-18	NA	112715477	112709993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714975
transcript_120301.known	chr20	+	1191	3	FSM	ENSG00000101363.13	ENST00000373606.8	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	152.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	6	True	NA	21	True	AATAAA	-21	NA	37289654	37317260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37289687_37301207_37301414_37316307
transcript_120304.known	chr20	+	1503	4	FSM	ENSG00000101363.13	ENST00000397151.1	1503	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	193.852177358591	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	2849	False	NA	21	True	AATAAA	-21	NA	37297344	37317260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37297535_37298762_37298880_37301170_37301414_37316307
transcript_120310.nnic	chr20	+	4315	15	NNC	ENSG00000197122.13	novel	4794	15	NA	NA	-201	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	36.7884187632744	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	1202	False	NA	23	True	ATTAAA	-23	NA	37345907	37405422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37386410_37386478_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_120311.nic	chr20	+	4291	15	NIC	ENSG00000197122.13	novel	4794	15	NA	NA	-226	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	36.9628191565524	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	1177	False	NA	23	True	ATTAAA	-23	NA	37345882	37405422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37386459_37386478_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_120313.nnic	chr20	+	4354	15	FSM	ENSG00000197122.13	ENST00000692112.1	4794	15	-188	628	-188	0	multi-exon	FALSE	canonical	2	7	junction_1	34.8847226956303	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	1215	False	NA	23	True	ATTAAA	-23	NA	37345920	37405422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37346256_37347117_37347237_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_120315.nic	chr20	+	4110	14	NIC	ENSG00000197122.13	novel	4337	13	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_1	27.3450448763563	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	-28	True	NA	23	True	ATTAAA	-23	NA	37344677	37405422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_37344888_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_120320.known	chr20	+	4644	14	FSM	ENSG00000197122.13	ENST00000373578.7	4644	14	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	8.79819777134321	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTGTTCAGTATTA	1	True	NA	NA	False	ATTAAA	-21	NA	37346139	37406050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_120326.nnic	chr20	+	4080	13	NIC	ENSG00000197122.13	novel	4644	14	NA	NA	-201	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	27.374334086269	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	1202	False	NA	23	True	ATTAAA	-23	NA	37345907	37405422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_37346256_37365203_37365278_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_120339.known	chr20	+	998	3	FSM	ENSG00000053438.11	ENST00000647955.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGATCTTGCTTTTCCCT	9	True	NA	41	True	ACTAAA	-29	NA	37521240	37523474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37521404_37522357_37522385_37522666
transcript_120341.known	chr20	+	895	3	FSM	ENSG00000053438.11	ENST00000649309.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	189	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCCTCACTGCCTCCC	29	True	NA	-91	True	NA	NA	NA	37521260	37523342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37521404_37522357_37522434_37522666
transcript_120344.known	chr20	-	588	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGATCCCGGCGTTGTG	-4	True	NA	NA	False	NA	NA	NA	37527878	37518939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37519351_37521318_37521410_37527792
transcript_120345.known	chr20	-	581	3	FSM	ENSG00000166619.15	ENST00000414080.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTTTCCTGTACCA	-4	True	NA	NA	False	NA	NA	NA	37527878	37518988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37519351_37521318_37521452_37527792
transcript_120346.known	chr20	+	1222	2	FSM	ENSG00000053438.11	ENST00000346199.3	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	-26	True	NA	54	True	NA	NA	NA	37521205	37523690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37521404_37522666
transcript_120348.known	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-2	True	NA	-8	True	AATAAA	-16	NA	37527876	37517416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37519351_37527792
transcript_120349.known	chr20	-	572	2	FSM	ENSG00000166619.15	ENST00000456058.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCGTCCTCCTCATCCC	6203	False	NA	NA	False	NA	NA	NA	37521693	37519153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37519351_37521318
transcript_120354.known	chr20	+	1890	16	FSM	ENSG00000132792.19	ENST00000361383.11	1890	16	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_8	51.1090337742099	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	-39	True	NA	14	True	ATTAAA	-14	NA	37694029	37872118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_120363.known	chr20	+	582	4	FSM	ENSG00000132792.19	ENST00000472237.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	39.8246155034798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTTGTAGTTAAGCT	11	False	NA	25	True	ATTAAA	-25	NA	37842253	37872129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37842420_37859898_37860037_37860271_37860345_37871924
transcript_120364.known	chr20	+	1936	4	FSM	ENSG00000132821.12	ENST00000373461.9	1936	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	0.942809041582063	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGGCAGTGTCTTTCT	5	True	NA	NA	False	AATAAA	-16	NA	37903126	37945350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37903472_37931634_37931805_37933538_37933590_37943980
transcript_120365.known	chr20	+	656	3	FSM	ENSG00000132821.12	ENST00000448944.1	656	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCCGTCCTGCATCT	20	False	NA	NA	False	NA	NA	NA	37903141	37944136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37903472_37931634_37931805_37943980
transcript_120372.nic	chr20	-	2623	9	NIC	ENSG00000101407.13	novel	3958	9	NA	NA	14	0	intron_retention	FALSE	canonical	3	5	junction_7	138.410395202095	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAAAAGCTCACTTTG	4	True	NA	-15	True	AATAAA	-22	NA	38033442	37983021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38012539_38013699_38013858_38033403
transcript_120376.known	chr20	-	3958	9	FSM	ENSG00000101407.13	ENST00000373448.6	3958	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	171.512208020304	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTTTTTTATTTAA	-15	True	NA	0	True	AATAAA	-37	NA	38033461	37983006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38019004_38019145_38033403
transcript_120379.known	chr20	-	3799	8	FSM	ENSG00000101407.13	ENST00000373447.8	3799	8	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	37.4906791137232	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-10	True	NA	-14	True	AATAAA	-23	NA	38033456	37983020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
transcript_120389.nic	chr20	-	3448	2	ISM	ENSG00000101407.13	ENST00000373447.8	3799	8	-5	27447	0	1340	5prime_fragment	FALSE	canonical	3	370	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGGCAAAATTTTGGAC	-15	True	NA	NA	False	NA	NA	NA	38033461	38010467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_38013858_38033403
transcript_120390.nic	chr20	-	3259	2	ISM	ENSG00000101407.13	ENST00000373447.8	3799	8	14	27617	14	1170	5prime_fragment	FALSE	canonical	3	370	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGACGTGGTGGCGG	4	True	NA	NA	False	AATAAA	-11	NA	38033442	38010637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_38013858_38033403
transcript_120392.known	chr20	-	3791	7	FSM	ENSG00000101407.13	ENST00000449821.1	3791	7	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	36.481730587606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAAAAGCTCACTTTG	NA	False	NA	-15	True	AATAAA	-22	NA	38013903	37983021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514
transcript_120393.known	chr20	-	4970	13	FSM	ENSG00000198959.12	ENST00000361475.7	4970	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.15380799722001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGGGTGCCGAATCCT	27	True	NA	NA	False	AATAAA	-25	NA	38165270	38127384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38130370_38131092_38131230_38132339_38132501_38138112_38138386_38139411_38139655_38141281_38141386_38142063_38142200_38146716_38146895_38147960_38148090_38150938_38151058_38155846_38156090_38161419_38161600_38165188
transcript_120394.known	chr20	-	1862	10	FSM	ENSG00000198959.12	ENST00000468262.5	1862	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.36225462505214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTATTGCAAGAGTGAG	15	True	NA	NA	False	TATAAA	-15	NA	38165282	38137949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38138386_38139411_38139655_38141281_38141386_38142063_38142200_38146716_38146895_38147960_38148090_38150938_38151058_38155846_38156090_38161419_38161600_38165188
transcript_120397.known	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	7.06517279807555	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	-2	True	NA	14	True	AATAAA	-19	NA	38033745	38092364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
transcript_120398.nic	chr20	+	1786	7	NIC	ENSG00000101413.12	novel	3672	7	NA	NA	-248	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	49.5501990129426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACCTATGGCTTTTTTA	66	False	NA	NA	False	AATAAA	-19	NA	38033476	38127780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38127296
transcript_120402.known	chr20	-	2557	8	FSM	ENSG00000149633.12	ENST00000496900.2	2557	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTTACAGTGAAGGTA	16	False	NA	NA	False	AATAAA	-13	NA	38260772	38225548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38225782_38227153_38227241_38228146_38228241_38231201_38231326_38239527_38239726_38240581_38241930_38245928_38246127_38260497
transcript_120404.known	chr20	-	1240	9	FSM	ENSG00000196756.14	ENST00000670958.1	1240	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	74.8012992868439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	NA	False	NA	-17	True	AATAAA	-13	NA	38435409	38420593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_120407.known	chr20	-	1279	8	FSM	ENSG00000196756.14	ENST00000668054.2	1291	8	6	6	0	0	multi-exon	FALSE	canonical	3	14	junction_3	74.5478890050016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-12	True	NA	-17	True	AATAAA	-13	NA	38435356	38420593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_120408.known	chr20	-	1111	8	FSM	ENSG00000196756.14	ENST00000669137.1	1111	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	78.7462989088169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_120409.known	chr20	-	1230	8	FSM	ENSG00000196756.14	ENST00000664636.1	1230	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	74.3444822486264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	10	True	NA	-17	True	AATAAA	-13	NA	38435334	38420593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_12041.known	chr1	-	1042	7	FSM	ENSG00000155366.17	ENST00000468093.5	1042	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	336.683539181166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTTGTTTTCGGCAG	2	True	NA	-113	True	NA	NA	NA	112707102	112701209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703383_112703458_112703643_112703807_112705099_112705124_112707077
transcript_120410.known	chr20	-	1111	8	FSM	ENSG00000196756.14	ENST00000651115.2	1111	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	74.054861075959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-34	True	NA	-10	True	AATAAA	-20	NA	38435378	38420586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_120415.known	chr20	-	1301	8	FSM	ENSG00000196756.14	ENST00000665735.1	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	73.6921339916609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_120416.known	chr20	-	1122	8	FSM	ENSG00000196756.14	ENST00000666419.1	1122	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	81.0180126104494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAATTGCTCCATGTGC	-39	True	NA	-26	True	AATAAA	-4	NA	38435383	38420602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_120417.known	chr20	-	1200	8	FSM	ENSG00000196756.14	ENST00000657843.1	1200	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	76.6987214857655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	31	True	NA	-17	True	AATAAA	-13	NA	38435313	38420593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_120418.known	chr20	-	1077	8	FSM	ENSG00000196756.14	ENST00000656320.1	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	73.5055183267882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTCTTAAATCAGT	-8	True	NA	-13	True	AATAAA	-17	NA	38435352	38420589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_120419.known	chr20	-	1332	8	FSM	ENSG00000196756.14	ENST00000667912.1	1332	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	75.7056598860053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-14	True	NA	-15	True	AATAAA	-15	NA	38435358	38420591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427848_38431040_38431113_38434503_38434627_38435026
transcript_12042.known	chr1	-	891	7	FSM	ENSG00000155366.17	ENST00000484280.6	891	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	324.643094626836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTCCCTCCTGCCCA	-7	True	NA	NA	False	NA	NA	NA	112707133	112701436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703383_112703458_112703643_112703807_112705099_112705169_112707077
transcript_120422.known	chr20	-	1192	7	FSM	ENSG00000196756.14	ENST00000660885.2	1202	7	10	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	66.2688128425095	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_120423.known	chr20	-	1022	7	FSM	ENSG00000196756.14	ENST00000665233.2	1026	7	4	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	72.1997614646721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_120424.known	chr20	-	1154	7	FSM	ENSG00000196756.14	ENST00000664073.2	1166	7	10	2	0	0	multi-exon	FALSE	canonical	2	4	junction_2	70.7428834269254	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_120425.known	chr20	-	968	7	FSM	ENSG00000196756.14	ENST00000669480.1	968	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	75.9160720796328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434519_38434627_38435196
transcript_120428.known	chr20	-	2010	7	FSM	ENSG00000196756.14	ENST00000658076.1	2010	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.3151239606224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACACATGTCCCAGGG	-14	True	NA	NA	False	NA	NA	NA	38435358	38419673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422290_38422369_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_120429.known	chr20	-	1724	7	FSM	ENSG00000196756.14	ENST00000662982.2	1728	7	4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.717222444234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGATGGCACCACTGC	-33	True	NA	NA	False	NA	NA	NA	38435377	38419808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422290_38422369_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_120430.known	chr20	-	923	7	FSM	ENSG00000196756.14	ENST00000417578.7	934	7	9	2	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	81.9845852720023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	25	True	NA	-15	True	AATAAA	-15	NA	38435319	38420591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_120432.known	chr20	-	2120	7	FSM	ENSG00000196756.14	ENST00000657868.1	2120	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	77.5938499853922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTCTTAAATCAGTG	-30	True	NA	-12	True	AATAAA	-18	NA	38435374	38420588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_120434.known	chr20	-	1044	6	FSM	ENSG00000196756.14	ENST00000665181.1	1044	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	77.2735401026768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-12	True	NA	-15	True	AATAAA	-15	NA	38435356	38420591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38435026
transcript_120438.known	chr20	-	1037	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	4	2	0	0	multi-exon	FALSE	canonical	3	89	junction_2	39.8376706146331	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_120439.known	chr20	-	868	6	FSM	ENSG00000196756.14	ENST00000654183.2	874	6	6	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	58.8747823775171	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-33	True	NA	-10	True	AATAAA	-20	NA	38435377	38420586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_120442.known	chr20	-	893	5	FSM	ENSG00000196756.14	ENST00000655520.2	897	5	4	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	72.242646684628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-12	True	NA	-11	True	AATAAA	-19	NA	38435356	38420587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38435026
transcript_120447.known	chr20	+	1299	6	FSM	ENSG00000174365.21	ENST00000666350.1	1299	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	27.1071946169278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-10	True	NA	32	True	AATAAA	-14	NA	38446679	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_120448.known	chr20	+	1234	6	FSM	ENSG00000174365.21	ENST00000432153.6	1234	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	30.9748284902435	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	-18	True	NA	33	True	AATAAA	-15	NA	38446671	38450922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_120449.known	chr20	+	1172	6	FSM	ENSG00000174365.21	ENST00000666020.1	1172	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8425027803687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-2	True	NA	32	True	AATAAA	-14	NA	38446687	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38446968_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_120450.known	chr20	+	1116	5	FSM	ENSG00000174365.21	ENST00000434729.7	1143	5	27	0	2	0	multi-exon	FALSE	canonical	2	3	junction_2	27.976552682559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	5	True	NA	32	True	AATAAA	-14	NA	38446694	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261_38450448_38450532
transcript_120451.known	chr20	+	1046	5	FSM	ENSG00000174365.21	ENST00000421599.6	1093	5	42	5	-2	0	multi-exon	FALSE	canonical	2	3	junction_2	29.8862426544388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	1	True	NA	32	True	AATAAA	-14	NA	38446690	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450335_38450448_38450532
transcript_120452.known	chr20	+	1259	5	FSM	ENSG00000174365.21	ENST00000669207.1	1259	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	29.9749895746437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	438	False	NA	31	True	AATAAA	-13	NA	38447171	38450920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_120453.known	chr20	+	1490	5	FSM	ENSG00000174365.21	ENST00000418383.2	1490	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	34.6049129459966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTTTGGTTTTT	153	False	NA	51	True	AATAAA	-33	NA	38446886	38450940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_120454.known	chr20	+	1068	5	FSM	ENSG00000174365.21	ENST00000667760.2	1076	5	7	1	2	0	multi-exon	FALSE	canonical	3	13	junction_1	27.4988636128841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	-8	True	NA	31	True	AATAAA	-13	NA	38446681	38450920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_120455.known	chr20	+	967	5	FSM	ENSG00000174365.21	ENST00000359074.9	967	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.9071189210512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	11	True	NA	31	True	AATAAA	-13	NA	38446700	38450920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38446941_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_120456.known	chr20	+	1169	4	FSM	ENSG00000174365.21	ENST00000437028.5	1169	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	13.8884444373331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-7	True	NA	32	True	AATAAA	-14	NA	38446726	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261
transcript_120457.known	chr20	+	1152	4	FSM	ENSG00000174365.21	ENST00000670898.2	1154	4	2	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	14.2672897060218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-16	True	NA	32	True	AATAAA	-14	NA	38446673	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450335
transcript_120458.nic	chr20	+	1619	4	FSM	ENSG00000174365.21	ENST00000693500.1	1600	4	-19	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	24.7969532178631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	NA	False	NA	32	True	AATAAA	-14	NA	38446648	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38448661_38448731_38450261_38450448_38450532
transcript_120459.known	chr20	+	880	4	FSM	ENSG00000174365.21	ENST00000457218.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	6.97614984548545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	580	False	NA	32	True	AATAAA	-14	NA	38447313	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38448661_38448731_38450335_38450448_38450532
transcript_120461.known	chr20	+	901	4	FSM	ENSG00000174365.21	ENST00000442419.2	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	30.9012764928714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	808	False	NA	32	True	AATAAA	-14	NA	38447541	38450921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38447929_38448094_38448661_38448731_38450335
transcript_120465.known	chr20	+	1581	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	25	1	0	0	multi-exon	FALSE	canonical	3	61	junction_1	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	7	True	NA	31	True	AATAAA	-13	NA	38446696	38450920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38448661_38448731_38450335
transcript_120466.nic	chr20	+	3233	2	ISM	ENSG00000174365.21	ENST00000693500.1	1600	4	-19	2	0	-1	intron_retention	FALSE	canonical	3	61	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGCTTGTTCTTTC	NA	False	NA	30	True	AATAAA	-12	NA	38446648	38450919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_38447624_38448661
transcript_120467.known	chr20	+	4108	2	FSM	ENSG00000174365.21	ENST00000663763.1	4108	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACCCACTCAATAAATCT	9	True	NA	2	True	NA	NA	NA	38446698	38450891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38450448_38450532
transcript_120468.known	chr20	+	8652	30	FSM	ENSG00000170471.15	ENST00000397042.7	8652	30	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	24.6303950734542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTGTGTGCTTTTGG	-29	True	NA	21	True	ATTAAA	-24	NA	38472815	38578859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535085_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565355_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
transcript_12047.known	chr1	-	1028	6	FSM	ENSG00000155366.17	ENST00000369638.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_4	338.937752397103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTTTATACACTTCTG	-9	True	NA	NA	False	NA	NA	NA	112707135	112701274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705052_112705169_112707077
transcript_120470.known	chr20	+	8633	30	FSM	ENSG00000170471.15	ENST00000262879.11	8633	30	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_24	16.3909577462175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTGTGTGTGCTTTTG	-2	True	NA	20	True	ATTAAA	-23	NA	38472842	38578858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535073_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565358_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
transcript_120477.known	chr20	+	2841	15	FSM	ENSG00000124143.11	ENST00000373345.9	2967	15	125	1	125	-1	multi-exon	TRUE	canonical	1	1	junction_12	2.72179412617966	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTACTTTGCCTGTTTT	56	False	NA	16	True	AGTAAA	-21	NA	38601933	38650652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38602080_38623358_38623559_38626994_38627216_38628926_38629003_38629501_38629651_38634619_38634786_38637707_38637800_38638760_38638839_38639226_38639387_38641725_38641809_38643703_38643911_38646046_38646188_38646956_38647127_38648642_38648699_38649756
transcript_120486.known	chr20	+	2547	9	FSM	ENSG00000101442.10	ENST00000243903.6	2547	9	0	0	0	0	multi-exon	TRUE	canonical	3	134	junction_5	13.801607696207	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCTCCTCCTATTTT	-6	True	NA	NA	False	AATAAA	-25	NA	38748459	38772520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38748854_38750009_38750240_38752130_38752301_38754956_38755175_38755856_38756040_38765401_38765519_38766237_38766378_38767463_38767597_38771558
transcript_120489.known	chr20	+	6259	11	FSM	ENSG00000101445.10	ENST00000299824.6	6259	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	5.74456264653803	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTAGTGTGAGTGATTA	-11	True	NA	16	True	ATTAAA	-25	NA	38805696	38923024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38805793_38835824_38836176_38889594_38889666_38895564_38895711_38900580_38900685_38902667_38902793_38905968_38906095_38906978_38907055_38907805_38907936_38908027_38908194_38918156
transcript_120494.known	chr20	+	2370	4	FSM	ENSG00000101447.15	ENST00000619850.2	2370	4	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_3	34.4512538072113	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCCCCCCCTCTGACA	2	True	NA	14	True	AATAAA	-21	NA	38926416	38953106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38926926_38941958_38942127_38947875_38948001_38951538
transcript_12050.known	chr1	-	888	6	FSM	ENSG00000155366.17	ENST00000369637.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	318.307147265028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCCCTTTGACCTTCCC	1	True	NA	NA	False	NA	NA	NA	112707125	112701312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705124_112707077
transcript_12051.known	chr1	-	1026	6	FSM	ENSG00000155366.17	ENST00000369632.6	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	317.058101930861	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCCCTCCCTTCACAG	8396	False	NA	NA	False	GGGGCT	-35	NA	112707079	112701519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706731
transcript_120512.known	chr20	+	3318	22	FSM	ENSG00000101452.15	ENST00000484417.5	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	22.7375841378609	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	5	True	NA	24	True	AGTAAA	-34	NA	38962359	39039721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_120515.known	chr20	+	3314	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	13.8882811658425	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	-11	True	NA	24	True	AGTAAA	-34	NA	38962343	39039721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_12052.known	chr1	-	866	6	FSM	ENSG00000155366.17	ENST00000425265.6	866	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	318.307147265028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCATTCTCTGAGATC	8419	False	NA	NA	False	NA	NA	NA	112707056	112701555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706832
transcript_120521.nic	chr20	+	3275	21	NIC	ENSG00000101452.15	novel	3314	22	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	24.6971152161543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	NA	False	NA	24	True	AGTAAA	-34	NA	38962304	39039721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_120524.known	chr20	+	2347	21	FSM	ENSG00000101452.15	ENST00000373323.8	2347	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	24.6649548955598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGCTCTATGGGAAACA	-11	True	NA	NA	False	NA	NA	NA	38962343	39038847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_12053.known	chr1	-	1117	6	FSM	ENSG00000155366.17	ENST00000339083.12	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	289.285602821848	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-1	True	NA	-34	True	AATAAA	-16	NA	112707127	112701130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112707077
transcript_120530.known	chr20	+	3376	23	FSM	ENSG00000101452.15	ENST00000652169.1	3376	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	34.1547281433399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAATGTCTTCCCTCCCA	-5	True	NA	4	True	AGTAAA	-14	NA	38962349	39039701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39010511_39010580_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_120531.known	chr20	-	3389	1	FSM	ENSG00000204103.4	ENST00000373313.3	3389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTCGCATGATTTT	0	True	NA	4	True	ATTAAA	-29	NA	40689236	40685847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_40685800_40689200
transcript_120533.known	chr20	+	5285	33	FSM	ENSG00000124181.15	ENST00000244007.7	5285	33	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	17.6329769182631	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTTGTATGCTCTTT	-14	True	NA	20	True	AATAAA	-21	NA	41136959	41175721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_41137036_41137520_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174123_41174312_41174466
transcript_120544.known	chr20	+	3734	21	FSM	ENSG00000198900.7	ENST00000361337.3	3734	21	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	39.328456618586	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTCTGCCTCTTTG	-1	True	NA	6	True	AATAAA	-21	NA	41028821	41124487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
transcript_120547.nic	chr20	+	773	7	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	43085	-35	-43085	5prime_fragment	FALSE	canonical	3	197	junction_1	38.8905158389834	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAGAAGAAGAGGTTAG	4579	False	NA	NA	False	ATTAAA	-34	NA	41028786	41081225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164
transcript_120548.nic	chr20	+	461	4	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	48115	-35	-48115	5prime_fragment	FALSE	canonical	3	197	junction_1	23.6971634495683	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAGAGAAGGAGAAGAC	4579	False	NA	-1	True	CATAAA	-16	NA	41028786	41076195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170
transcript_120549.nic	chr20	+	531	4	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	48045	-35	-48045	5prime_fragment	FALSE	canonical	3	197	junction_1	23.6971634495683	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAAGGAAAAACGAAAA	4579	False	NA	8	True	CATAAA	-17	NA	41028786	41076265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170
transcript_120550.nic	chr20	+	436	3	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	62820	-35	-62820	5prime_fragment	FALSE	canonical	3	197	junction_1	9.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGTGGAATCAAGCAA	4579	False	NA	82	True	NA	NA	NA	41028786	41061490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393
transcript_120556.known	chr20	+	4462	20	FSM	ENSG00000132793.12	ENST00000373257.8	4462	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.80185929562235	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGCTTCTGTTCTG	-8	True	NA	15	True	AATAAA	-17	NA	41340820	41360582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_41341003_41345795_41345996_41347551_41347648_41348618_41348888_41349091_41349173_41349773_41349895_41350054_41350398_41351820_41351921_41352059_41352221_41352605_41352700_41352797_41352868_41354644_41354738_41354819_41354864_41355895_41356035_41357039_41357189_41357360_41357448_41357881_41358035_41358236_41358352_41358438_41358543_41358721
transcript_120561.nic	chr20	-	818	4	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-170	112837	-163	0	5prime_fragment	FALSE	canonical	3	41	junction_3	10.0332779621949	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	1	True	NA	NA	False	NA	NA	NA	41618547	41514919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_41514953_41533049_41533571_41551304_41551361_41618339
transcript_120562.known	chr20	-	599	3	FSM	ENSG00000124177.16	ENST00000482596.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	27.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	15	True	NA	NA	False	NA	NA	NA	41618384	41514919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_41514953_41533049_41533571_41618339
transcript_120569.known	chr20	+	3432	22	FSM	ENSG00000185513.17	ENST00000418998.7	3432	22	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	19.987184102436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATAGTTGTCCTTAAGT	3	True	NA	3	True	AATAAA	-19	NA	43507696	43541895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43507745_43513475_43513640_43513837_43514062_43514634_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43530420_43530797_43530890_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43540933
transcript_12057.known	chr1	-	1355	5	FSM	ENSG00000155366.17	ENST00000369642.7	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_4	132.524290226358	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	8041	False	NA	-34	True	AATAAA	-16	NA	112707434	112701130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112707077
transcript_120581.nnic	chr20	+	2089	8	NNC	ENSG00000185513.17	novel	5190	21	NA	NA	-6	43	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	19.6935708974751	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCAGGCATGGTGG	-20	True	NA	NA	False	AATACA	-22	NA	43507673	43518873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_43507745_43513475_43513640_43513837_43514062_43514634_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43517745
transcript_120585.known	chr20	+	1680	7	FSM	ENSG00000124193.16	ENST00000483871.6	1680	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	100.495439365841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTTTTTTTTTTTT	31	False	NA	NA	False	NA	NA	NA	43457927	43461334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43458141_43458360_43458510_43459152_43459421_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_120586.known	chr20	+	1227	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	84.1455419034319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	-4	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
transcript_120588.known	chr20	+	4353	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	18.8785592670627	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	-1	True	NA	104	True	AATAAA	-18	NA	43457895	43464243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_120595.known	chr20	+	3871	17	FSM	ENSG00000185513.17	ENST00000648570.1	3871	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	14.9248115565993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTGTTAAGTCATACAAAA	10	True	NA	NA	False	NA	NA	NA	43514471	43542581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43530420_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752
transcript_120596.known	chr20	+	1871	13	FSM	ENSG00000101049.18	ENST00000373100.7	1871	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGATATTTGTCTTT	2	True	NA	30	True	NA	NA	NA	43559026	43585627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43559160_43566472_43566532_43567067_43567118_43567664_43567723_43567915_43568000_43569384_43569517_43570616_43570730_43571023_43571061_43572050_43572138_43574908_43575005_43576223_43576380_43579971_43580062_43584851
transcript_120597.known	chr20	-	588	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTCCACAATTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	43590596	43590008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_43590000_43590600
transcript_120599.nnic	chr20	+	1802	15	NNC	ENSG00000101052.13	novel	1754	14	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	118.876200395235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	-37	True	NA	37	True	ATTAAA	-32	NA	43590924	43647222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618240_43618354_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_120601.known	chr20	+	1754	14	FSM	ENSG00000101052.13	ENST00000373030.8	1754	14	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	39.0176716146011	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTGTAAATACTGTAC	-25	True	NA	114	True	NA	NA	NA	43590936	43647299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_120603.known	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	61.9731761023511	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	28	True	NA	37	True	ATTAAA	-32	NA	43590989	43647222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_120625.known	chr20	+	2668	14	FSM	ENSG00000101057.16	ENST00000217026.5	2668	14	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_2	129.143422862487	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGTCTGGACTCTGC	-2	True	NA	17	True	AATAAA	-15	NA	43667113	43716482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43667304_43673805_43673900_43681783_43681856_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
transcript_12064.known	chr1	-	767	4	FSM	ENSG00000215866.9	ENST00000433505.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1454.33635113141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	4248	False	NA	-19	True	AATAAA	-23	NA	112849815	112820169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112849679
transcript_12065.nic	chr1	-	768	3	FSM	ENSG00000215866.9	ENST00000691250.1	700	3	-68	0	-68	0	multi-exon	FALSE	canonical	3	2036	junction_1	759	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-19	True	AATAAA	-23	NA	112825809	112820169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112820539_112823652_112823755_112825512
transcript_120666.known	chr20	+	2704	13	FSM	ENSG00000101057.16	ENST00000396863.8	2704	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	508.991834413874	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCCTCTCTACTGGGC	9416	False	NA	30	True	AATAAA	-28	NA	43667018	43716495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43667304_43673805_43673900_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
transcript_12067.known	chr1	-	1222	3	FSM	ENSG00000215866.9	ENST00000667852.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_1	1046.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-27	True	AATAAA	-15	NA	112826268	112820177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112820542_112823652_112823755_112825512
transcript_120703.nic	chr20	+	2033	7	NIC	ENSG00000124191.18	novel	2491	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	4.83045891539648	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCTGTGTCTCCTTGCC	3	True	NA	NA	False	AATAAA	-20	NA	43914832	44069616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_43914991_43973366_43973433_44006546_44006793_44051305_44051546_44054298_44054527_44066729_44066858_44068649
transcript_120704.known	chr20	-	1923	2	FSM	ENSG00000149596.7	ENST00000342272.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTCTTTTTCTTT	9198	False	NA	NA	False	ATTAAA	-20	NA	44187093	44176816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44177973_44186326
transcript_120707.known	chr20	-	2109	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	20.4178571081514	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTGGCTGTGGTTGAT	16	True	NA	NA	False	AATACA	-20	NA	44210771	44195938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
transcript_12071.known	chr1	+	490	2	FSM	ENSG00000224167.3	ENST00000422022.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTGCTAGTAATATGA	218	False	NA	20	True	AATAAA	-12	NA	112850075	112877867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112850428_112877729
transcript_120712.nnic	chr20	-	1062	3	NIC	ENSG00000132823.11	novel	2109	4	NA	NA	-35	-411	combination_of_known_splicesites	FALSE	canonical	3	82	junction_1	223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTTCATTCTTTCAA	-19	True	NA	-3	True	AATAAA	-20	NA	44210806	44196906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_44197740_44206880_44206999_44210695
transcript_120713.known	chr20	+	1759	4	FSM	ENSG00000223891.7	ENST00000660003.1	1759	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTATGATTTTG	NA	False	NA	2	True	AATAAA	-17	NA	44210942	44226012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211078_44214887_44215004_44217366_44217683_44224820
transcript_120714.known	chr20	+	1904	4	FSM	ENSG00000223891.7	ENST00000435163.5	1904	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTCCATCTCAAAAAAA	10	False	NA	-38	True	NA	NA	NA	44211036	44225972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211357_44214887_44215004_44217366_44217683_44224820
transcript_120715.known	chr20	+	1441	3	FSM	ENSG00000223891.7	ENST00000439943.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	NA	False	NA	17	True	AATAAA	-32	NA	44210959	44226027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211078_44214887_44215004_44224820
transcript_120716.known	chr20	+	1627	3	FSM	ENSG00000223891.7	ENST00000655968.1	1627	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	0	True	NA	-41	True	NA	NA	NA	44210994	44225969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211357_44214887_44215004_44224820
transcript_120718.known	chr20	+	1366	2	FSM	ENSG00000223891.7	ENST00000671199.2	1378	2	0	12	0	-3	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTATGATTTTGTTT	NA	False	NA	5	True	AATAAA	-20	NA	44210906	44226015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211078_44224820
transcript_120719.known	chr20	+	1482	2	FSM	ENSG00000223891.7	ENST00000442383.1	1482	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	55	False	NA	17	True	AATAAA	-32	NA	44211081	44226027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211357_44224820
transcript_120722.known	chr20	+	2778	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	10.36532681588	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATCTTTTTTCATC	-3	True	NA	NA	False	AATAAA	-16	NA	44247307	44280947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_120725.known	chr20	+	880	5	FSM	ENSG00000124194.17	ENST00000438466.5	880	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	24.3618554301597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGCTCCCTGGGTGGG	9	True	NA	-78	True	NA	NA	NA	44247319	44279235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44247515_44257152_44257346_44263229_44263328_44264444_44264560_44278956
transcript_12073.known	chr1	-	3753	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_2	121.073066782006	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	-1	True	NA	-14	True	AATAAA	-18	NA	112956196	112911846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
transcript_120732.known	chr20	-	4628	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCATTTTGTGTGT	-22	True	NA	NA	False	ATTAAA	-25	NA	44311202	44302839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44307241_44310975
transcript_120733.known	chr20	+	1339	10	FSM	ENSG00000101076.19	ENST00000457232.5	1339	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	11.1952370824978	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGCTTGGGGGCTCCA	93	False	NA	NA	False	NA	NA	NA	44355800	44429671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44355854_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428458_44429522
transcript_120735.known	chr20	+	1470	10	FSM	ENSG00000101076.19	ENST00000316673.8	1470	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	5.73488351136175	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGCTTGGGGGCTCCA	-8	True	NA	NA	False	NA	NA	NA	44355699	44429671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44355854_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428488_44429522
transcript_120737.known	chr20	+	2302	10	FSM	ENSG00000101076.19	ENST00000415691.2	2302	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	13.6770511586037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGTAGAATTCTGGCTG	29	False	NA	NA	False	NA	NA	NA	44401300	44430500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44401488_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428458_44429522
transcript_120739.known	chr20	+	6490	10	FSM	ENSG00000101076.19	ENST00000316099.10	4739	10	0	-1751	0	1751	multi-exon	FALSE	canonical	3	5	junction_1	10.4609798186132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGGCTGCCATAAATTC	-3	True	NA	NA	False	AATAAA	-20	NA	44401238	44434596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44401488_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428488_44429522
transcript_12074.known	chr1	-	4374	5	FSM	ENSG00000155380.13	ENST00000538576.5	4374	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	646.91860964112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAACTTTTTCCTCAT	276	False	NA	-19	True	AATAAA	-13	NA	112956063	112911851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275
transcript_120747.known	chr20	+	6234	6	FSM	ENSG00000124120.11	ENST00000372904.7	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	20.6842935581566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	3	True	NA	14	True	AATAAA	-18	NA	44475887	44494603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44475992_44478623_44478648_44479984_44480445_44484336_44484531_44486595_44486707_44489262
transcript_120748.known	chr20	+	926	5	FSM	ENSG00000124120.11	ENST00000456317.1	926	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	22.3313120975907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTGCTGCCCGAGGGCC	1	True	NA	NA	False	NA	NA	NA	44475919	44489453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484429_44486595_44486707_44489262
transcript_120749.known	chr20	+	6224	5	FSM	ENSG00000124120.11	ENST00000262605.9	6224	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	13.7181449183189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	-11	True	NA	14	True	AATAAA	-18	NA	44475873	44494603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484531_44486595_44486707_44489262
transcript_120750.known	chr20	-	1726	11	FSM	ENSG00000132824.14	ENST00000255175.5	1726	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	150.072282584093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCTGTAAGGTGGTGA	-50	True	NA	-7	True	ATTAAA	-13	NA	44522085	44496223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44496356_44500257_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_120755.known	chr20	-	4396	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_7	33.6708834909589	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACTGATATTAATTTG	-35	True	NA	-11	True	AATAAA	-41	NA	44522070	44497440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_120763.known	chr20	-	1496	12	FSM	ENSG00000196839.13	ENST00000372874.9	1496	12	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_6	23.6174749701771	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGGCATGTAATTTGG	-4	True	NA	-12	True	AATAAA	-25	NA	44651699	44619521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_120767.known	chr20	-	1128	11	FSM	ENSG00000196839.13	ENST00000537820.1	1128	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	59.2347870765144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	4	True	NA	NA	False	NA	NA	NA	44651691	44619809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_120768.known	chr20	-	1276	11	FSM	ENSG00000196839.13	ENST00000492931.5	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	22.7103500633522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	4	True	NA	NA	False	NA	NA	NA	44651691	44619809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_120771.known	chr20	-	1356	11	FSM	ENSG00000196839.13	ENST00000536532.5	1356	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	59.1666291079693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTACTGAAAATCT	8928	False	NA	-69	True	NA	NA	NA	44651681	44619578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_120779.known	chr20	+	1338	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	260.578682934733	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	11	False	NA	23	True	AATAAA	-19	NA	44531784	44619037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
transcript_120781.known	chr20	+	1191	4	FSM	ENSG00000168734.14	ENST00000372894.7	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	105.849998687871	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	11	False	NA	23	True	AATAAA	-19	NA	44531784	44619037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44531979_44589796_44589867_44614533_44614708_44618284
transcript_120785.nic	chr20	+	821	3	ISM	ENSG00000168734.14	ENST00000372894.7	1191	4	57	3890	57	379	5prime_fragment	FALSE	canonical	3	415	junction_1	116.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCAGTGGCTTCACTGA	-46	True	NA	NA	False	TTTAAA	-38	NA	44531841	44615147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_44531979_44589796_44589867_44614533
transcript_120786.nic	chr20	+	3548	3	ISM	ENSG00000168734.14	ENST00000372894.7	1191	4	98	1122	-26	-1122	5prime_fragment	FALSE	canonical	3	415	junction_1	116.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACAGCTGCCATTTGCT	-5	True	NA	NA	False	ATTAAA	-16	NA	44531882	44617915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_44531979_44589796_44589867_44614533
transcript_120790.known	chr20	-	1036	6	FSM	ENSG00000101098.13	ENST00000541604.2	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	40.8783561313319	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGTTCTTGACCTGGTG	276	False	NA	NA	False	NA	NA	NA	44810271	44755910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44756353_44756897_44757038_44757669_44757772_44758071_44758185_44771274_44771417_44810174
transcript_120791.known	chr20	+	2514	2	FSM	ENSG00000124249.7	ENST00000372861.5	2514	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACGCAACAGCTGTGCC	-14	True	NA	NA	False	AATAAA	-19	NA	44745864	44752313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44746194_44750128
transcript_120792.known	chr20	+	3109	7	FSM	ENSG00000166913.13	ENST00000372839.7	3109	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	1085.86392896266	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	-21	True	NA	25	True	AATAAA	-27	NA	44885710	44908532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44885887_44887647_44887743_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_120793.known	chr20	+	3020	6	FSM	ENSG00000166913.13	ENST00000353703.9	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	2143	junction_1	217.304762948261	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	-27	True	NA	25	True	AATAAA	-27	NA	44885704	44908532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44885887_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_120800.known	chr20	+	2126	15	FSM	ENSG00000101104.13	ENST00000255136.8	2126	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	25.957677484863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	-17	True	NA	24	True	ATTAAA	-17	NA	44910059	44939316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_120818.known	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	19.8007829622255	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	2	True	NA	21	True	ATTAAA	-14	NA	44910123	44939313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_12083.known	chr1	+	742	3	FSM	ENSG00000226419.8	ENST00000416193.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	-10	True	NA	0	True	AATAAA	-15	NA	112956414	112964072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112956957_112960476_112960576_112963971
transcript_12084.known	chr1	+	1897	3	FSM	ENSG00000226419.8	ENST00000420168.2	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAGGTAGAGCTGGCCG	23	False	NA	NA	False	AAAACA	-3	NA	112956519	112969395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112956957_112960476_112960576_112968034
transcript_120852.known	chr20	-	1973	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_3	30.8999280833395	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	4	True	NA	-4	True	AATAAA	-24	NA	44960397	44942129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_120854.nnic	chr20	-	1790	6	NIC	ENSG00000025772.8	novel	1973	7	NA	NA	-52	-87	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	152.624244469874	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTGCTTTCATTT	7172	False	44960472	-2	True	ATTAAA	-20	NA	44960449	44942216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_44943214_44943452_44943580_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_120862.known	chr20	+	6366	11	FSM	ENSG00000101109.12	ENST00000372806.8	6366	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	15.6604597633658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTGTGTTTATTCT	-17	True	NA	58	True	AATATA	-43	NA	44966511	45080021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_120864.nic	chr20	+	1296	10	ISM	ENSG00000101109.12	ENST00000372801.5	2038	12	-38	50572	5	29779	5prime_fragment	FALSE	canonical	3	122	junction_8	16.3940669785982	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACCAGATCAACAGCT	-45	True	NA	NA	False	AAAAAG	-5	NA	44966483	45025036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972
transcript_120867.known	chr20	+	932	2	FSM	ENSG00000101109.12	ENST00000488618.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCCTACCTCTCTCTG	-14	True	NA	NA	False	AATAAA	-13	NA	44966514	44972920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44966604_44972077
transcript_120868.nic	chr20	-	4024	2	ISM	ENSG00000124134.9	ENST00000306117.5	4538	5	2458	0	2458	0	3prime_fragment	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGTGTTTCTGCTTGTA	2533	False	NA	-19	True	AATAAA	-13	NA	45098654	45092309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_45095341_45097661
transcript_120870.known	chr20	+	1622	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGACTCCTGTTT	-3	True	NA	15	True	AATAAA	-20	NA	45207032	45209768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45207130_45207373_45208731_45209600
transcript_120881.known	chr20	-	2313	11	FSM	ENSG00000124159.17	ENST00000537548.3	2313	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.95772951471958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTTTTTGGGTCTTGCTG	NA	False	NA	0	True	AATAAA	-21	NA	45308529	45293444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45293826_45293907_45294016_45297917_45298071_45298169_45298584_45300886_45301010_45301101_45301225_45301320_45301444_45304227_45304798_45305509_45305617_45308174_45308298_45308441
transcript_120882.known	chr20	-	2127	9	FSM	ENSG00000124159.17	ENST00000360607.10	2127	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.70450355311749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGGTCCGTTTTTGGGTCT	165	False	NA	-5	True	AATAAA	-16	NA	45308327	45293449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45293826_45293907_45294016_45297917_45298071_45298169_45298584_45300886_45301010_45301101_45301225_45304227_45304798_45305509_45305617_45308174
transcript_120884.known	chr20	-	2613	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	4.30116263352131	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	0	True	NA	-5	True	AATAAA	-18	NA	45348424	45325287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
transcript_120885.nnic	chr20	-	2480	4	NIC	ENSG00000124145.6	novel	2613	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	82.3825763671475	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	-6	True	NA	-5	True	AATAAA	-18	NA	45348430	45325287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_45327416_45330365_45330565_45333022_45333070_45348324
transcript_120886.known	chr20	+	1313	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	195.944277793458	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	36	True	NA	17	True	AATAAA	-22	NA	45363199	45410610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
transcript_120887.known	chr20	+	2728	4	FSM	ENSG00000204070.10	ENST00000243918.10	2728	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	18.624953392932	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCAGCAGTGTGGG	-8	True	NA	25	True	AATAAA	-22	NA	45363155	45369209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45366874
transcript_120890.known	chr20	+	2915	4	FSM	ENSG00000204070.10	ENST00000426004.5	2915	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	56.1802654160891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCCTCAGCAAGATTAA	-25	True	NA	NA	False	AATAAA	-25	NA	45363138	45376798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45374293
transcript_120893.known	chr20	+	1118	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	190.720272184742	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	8	True	NA	17	True	AATAAA	-22	NA	45406056	45410610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
transcript_120894.known	chr20	+	1202	4	FSM	ENSG00000244274.9	ENST00000372722.7	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	217.219295234614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	22	False	NA	17	True	AATAAA	-22	NA	45406070	45410610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45409037_45409931
transcript_120895.nnic	chr20	+	1094	4	NNC	ENSG00000244274.9	novel	1118	4	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	214.104854893318	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	-14	True	NA	14	True	AATAAA	-19	NA	45406002	45410607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45406136_45408459_45408607_45408800_45408939_45409931
transcript_120897.known	chr20	+	1537	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	215.041081346488	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	230	False	NA	17	True	AATAAA	-22	NA	45407206	45410610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
transcript_120898.known	chr20	+	1078	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	68.9266921365656	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	14	True	NA	17	True	AATAAA	-22	NA	45406618	45410610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
transcript_120899.known	chr20	+	1207	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	201.1737778362	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	-17	True	NA	17	True	AATAAA	-22	NA	45406587	45410610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
transcript_1209.nnic	chr1	+	2441	17	NNC	ENSG00000197785.14	novel	2481	16	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.267238721229	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	6429	False	NA	30	True	AATAAA	-18	NA	1512117	1534685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_1512228_1512311_1512474_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_12090.known	chr1	-	452	2	FSM	ENSG00000155380.13	ENST00000478835.1	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	1494	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGTCTGTATTAGGT	158	False	NA	NA	False	NA	NA	NA	112956181	112929047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112929353_112956034
transcript_120900.known	chr20	+	1036	4	FSM	ENSG00000244274.9	ENST00000357275.6	1036	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	220.659617208647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	8	True	NA	17	True	AATAAA	-22	NA	45406183	45410610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406256_45408459_45408607_45408800_45408939_45409931
transcript_120906.known	chr20	+	2311	13	FSM	ENSG00000124155.19	ENST00000638612.1	2311	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	255.230614673606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGGTGACAGGGAAG	5593	False	NA	NA	False	NA	NA	NA	45416122	45430149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45427421_45427546_45429480
transcript_120908.known	chr20	+	2158	12	FSM	ENSG00000124155.19	ENST00000639932.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	197.051111379428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTACTGTTTGTGGA	-2	True	NA	-14	True	NA	NA	NA	45416140	45426200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120909.known	chr20	+	2187	12	FSM	ENSG00000124155.19	ENST00000640986.1	2187	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	199.163457101518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTTGCCTCTTGTCCT	-2	True	NA	26	True	AATAAA	-16	NA	45416140	45426240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_12091.known	chr1	+	1508	3	FSM	ENSG00000226419.8	ENST00000664314.1	1508	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	-10	True	NA	0	True	AATAAA	-15	NA	112956414	112964072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112957723_112960476_112960576_112963971
transcript_120910.known	chr20	+	2112	12	FSM	ENSG00000124155.19	ENST00000640272.1	2112	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	187.941040517349	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	-2	True	NA	-25	True	NA	NA	NA	45416140	45426189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120914.known	chr20	+	2235	12	FSM	ENSG00000124155.19	ENST00000638383.1	2235	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	201.432186156619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	5592	False	NA	27	True	AATAAA	-17	NA	45416121	45426241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419639_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120918.known	chr20	+	2037	11	FSM	ENSG00000124155.19	ENST00000543458.7	2037	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	207.512023748023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTTGTCCTTGAG	5577	False	NA	30	True	AATAAA	-20	NA	45416106	45426244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416655_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120920.known	chr20	+	2021	11	FSM	ENSG00000124155.19	ENST00000639499.1	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	27.2257231308922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCTCTCTTTCTTTCCT	-2	True	NA	NA	False	NA	NA	NA	45416140	45425100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495
transcript_120922.known	chr20	+	1971	11	FSM	ENSG00000124155.19	ENST00000372689.9	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	204.175145402177	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	-6	True	NA	27	True	AATAAA	-17	NA	45416136	45426241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
transcript_120923.known	chr20	+	1807	11	FSM	ENSG00000124155.19	ENST00000455050.2	1807	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	271.295705826686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACGAGCCAAATGTGGC	-2	True	NA	NA	False	NA	NA	NA	45416140	45425977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120925.known	chr20	+	2032	11	FSM	ENSG00000124155.19	ENST00000638246.1	2032	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	205.131275041131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	5567	False	NA	-25	True	NA	NA	NA	45416096	45426189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120930.known	chr20	+	1944	11	FSM	ENSG00000124155.19	ENST00000638671.1	1944	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	207.080395016042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGAGTTTACTGTTT	-2	True	NA	-19	True	NA	NA	NA	45416140	45426195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120934.known	chr20	+	1880	10	FSM	ENSG00000124155.19	ENST00000279035.14	1880	10	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	209.270750258081	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	5554	False	NA	-12	True	NA	NA	NA	45416083	45426202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120937.known	chr20	+	1429	9	FSM	ENSG00000124155.19	ENST00000640175.1	1429	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.719904176804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGCTTTTGAACCAA	-2	True	NA	NA	False	NA	NA	NA	45416140	45425909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120941.known	chr20	+	1715	9	FSM	ENSG00000124155.19	ENST00000640210.1	1715	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.719904176804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	1	True	NA	-12	True	NA	NA	NA	45416143	45426202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120942.known	chr20	+	2203	12	FSM	ENSG00000124155.19	ENST00000640585.1	2203	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	198.332636524461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGAGTTTACTGTTTG	-2	True	NA	-18	True	NA	NA	NA	45416140	45426196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_120943.known	chr20	+	692	5	FSM	ENSG00000101443.18	ENST00000447118.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	349.388304755611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTCTGTCTCTGTCTCCC	2	True	NA	23	True	AATAAA	-16	NA	45469755	45481531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45469861_45470388_45470533_45471152_45471282_45479941_45480095_45481370
transcript_120946.known	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	695	junction_1	63.7303346574891	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	-1	True	NA	24	True	AATAAA	-17	NA	45469752	45481532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
transcript_120951.known	chr20	+	420	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	2	True	NA	24	True	AATAAA	-17	NA	45469755	45481532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45469861_45479941_45480095_45481370
transcript_120952.known	chr20	+	460	3	FSM	ENSG00000101443.18	ENST00000462062.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	361	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	3	False	NA	24	True	AATAAA	-17	NA	45471272	45481532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45471418_45479941_45480095_45481370
transcript_120953.known	chr20	+	493	2	FSM	ENSG00000180305.5	ENST00000372643.4	493	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCTCTTTTGCTGCCA	-3	True	NA	NA	False	AATAAA	-21	NA	45629738	45631196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45629905_45630869
transcript_120957.known	chr20	+	1264	13	FSM	ENSG00000101457.13	ENST00000372622.8	1264	13	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	29.6857382518198	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGAACCTGCTGTGCC	-1	True	NA	13	True	ATTAAA	-19	NA	45791953	45811418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_120959.known	chr20	+	1073	12	FSM	ENSG00000101457.13	ENST00000456939.5	1073	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	110.873690326477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCCCTCTACCTT	56	False	NA	22	True	ATTAAA	-28	NA	45792054	45811427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_120963.known	chr20	+	737	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	1352.1620317107	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	-10	True	NA	33	True	AATAAA	-26	NA	45812634	45816957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
transcript_120965.known	chr20	+	777	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	2645	junction_1	113.26005474129	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	-1	True	NA	28	True	AATAAA	-21	NA	45812643	45816952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_120967.known	chr20	+	914	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1138.47459348024	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	1	True	NA	33	True	AATAAA	-26	NA	45813005	45816957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_120968.known	chr20	+	641	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1208.04291624925	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	NA	False	NA	29	True	AATAAA	-22	NA	45812575	45816953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
transcript_120970.known	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1179.19527644916	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	1	True	NA	33	True	AATAAA	-26	NA	45812673	45816957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
transcript_120972.known	chr20	+	476	4	FSM	ENSG00000175063.17	ENST00000243893.10	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1323.29017561867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	13	False	NA	33	True	AATAAA	-26	NA	45812657	45816957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45815853_45815914_45816708
transcript_120974.known	chr20	-	780	7	FSM	ENSG00000101470.10	ENST00000372557.1	780	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	86.0666731216109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	NA	False	NA	3	True	AATAAA	-17	NA	45833745	45823213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45833250_45833329_45833657
transcript_120975.known	chr20	-	681	6	FSM	ENSG00000101470.10	ENST00000372555.8	681	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	83.7233539700841	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-3	True	NA	3	True	AATAAA	-17	NA	45827312	45823213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45827245
transcript_120976.nic	chr20	-	462	2	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	3026	0	3026	0	3prime_fragment	FALSE	canonical	3	249	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	9023	False	NA	3	True	AATAAA	-17	NA	45824286	45823213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_45823380_45823990
transcript_120984.known	chr20	-	1082	6	FSM	ENSG00000101473.17	ENST00000652771.1	1082	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	129.034259016743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGAGTGGCTGGCTT	461	False	NA	-22	True	AATAAA	-10	NA	45856924	45841729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45856782
transcript_120985.known	chr20	-	1154	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	15.9549365401433	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGGCTTTTAATTCCC	-7	True	NA	-13	True	AATAAA	-19	NA	45857392	45841720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_120987.known	chr20	-	1197	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	118.666928838662	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGGCTGGCTTTTAA	-4	True	NA	-18	True	AATAAA	-14	NA	45857389	45841725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_120990.known	chr20	+	1043	5	FSM	ENSG00000124104.19	ENST00000462307.5	1043	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.8627745466906	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGCCTCCACCCTTTG	16	True	NA	NA	False	NA	NA	NA	45833830	45841134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840447_45840459_45840638
transcript_120991.known	chr20	+	1506	5	FSM	ENSG00000124104.19	ENST00000342644.9	1506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	29.0172362570938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCTTTTCTTCATTTG	1	True	NA	37	True	TATAAA	-32	NA	45833851	45842881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840638_45840781_45842032
transcript_120993.known	chr20	-	1013	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	127.942369838924	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGATACCACTGGAGTG	-17	True	NA	-30	True	AATAAA	-2	NA	45857402	45841737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
transcript_120998.known	chr20	+	3206	4	FSM	ENSG00000124104.19	ENST00000491381.6	3206	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.4028983224563	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGACTAGAACTGGGTC	-16	True	NA	NA	False	AATACA	-17	NA	45833798	45843276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840638
transcript_12100.known	chr1	+	11566	18	FSM	ENSG00000198799.12	ENST00000361127.6	11566	18	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	21.0686799148974	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTCTTCTTTTGCC	-20	True	NA	5	True	AATAAA	-17	NA	113073197	113132260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113073646_113091317_113091384_113093205_113093281_113093429_113093565_113094338_113094483_113094611_113094756_113095873_113096018_113096221_113096366_113098704_113098786_113100210_113100283_113100419_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
transcript_121009.known	chr20	+	2776	2	FSM	ENSG00000132801.7	ENST00000255152.3	2776	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAAATGTGTTCTGCT	-4	True	NA	NA	False	AATAAA	-7	NA	45857613	45879122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45857981_45876713
transcript_121012.nnic	chr20	+	2204	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTTGTCTAGTTTTTT	-3	True	NA	27	True	AATAAA	-19	NA	45881204	45885264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45881262_45882532_45884393_45884977
transcript_121017.known	chr20	-	1889	16	FSM	ENSG00000100979.15	ENST00000372431.8	1889	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_9	25.7138095194003	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTATGGGAGACCCT	0	True	NA	-13	True	AATAAA	-18	NA	45912155	45898621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_121021.known	chr20	+	1898	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	84.9571320473701	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	12	True	NA	11	True	ATTAAA	-18	NA	45891340	45898820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_121022.known	chr20	+	1887	15	FSM	ENSG00000064601.21	ENST00000607482.6	1887	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	87.2847790457261	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	0	True	NA	11	True	ATTAAA	-18	NA	45891375	45898820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891450_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_121023.known	chr20	-	1731	15	FSM	ENSG00000100979.15	ENST00000354050.8	1731	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	118.917052209187	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTATGGGAGACCCTG	3	True	NA	-12	True	AATAAA	-19	NA	45912152	45898620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_121037.known	chr20	-	1530	14	FSM	ENSG00000100979.15	ENST00000372420.5	1530	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	123.395213433199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGGCTGTCCTGAG	1218	False	NA	-18	True	NA	NA	NA	45910937	45898759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45910870
transcript_121038.known	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	124.453028139205	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	0	True	NA	-64	True	NA	NA	NA	45912155	45898805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
transcript_121044.known	chr20	-	1199	2	FSM	ENSG00000124257.7	ENST00000372518.5	1199	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGAAGGTCTCCTTGC	2	True	NA	-24	True	AATAAA	-22	NA	45891208	45888633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45888874_45890249
transcript_121046.known	chr20	+	1858	15	FSM	ENSG00000064601.21	ENST00000646241.3	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_11	37.6124165343178	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	6	True	NA	11	True	ATTAAA	-18	NA	45891334	45898820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_121047.known	chr20	+	1996	14	FSM	ENSG00000064601.21	ENST00000372459.7	1996	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	38.2424529430395	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	10	False	NA	11	True	ATTAAA	-18	NA	45891385	45898820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_121048.known	chr20	+	1820	14	FSM	ENSG00000064601.21	ENST00000354880.9	1820	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	88.0057152528162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	-7	True	NA	11	True	ATTAAA	-18	NA	45891321	45898820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_121049.known	chr20	-	2255	15	FSM	ENSG00000100979.15	ENST00000477313.5	2255	15	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_9	26.0921639656078	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCCTGTGGGCTGTCCT	108	False	NA	-21	True	NA	NA	NA	45912047	45898762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352
transcript_121054.nnic	chr20	+	3051	18	NNC	ENSG00000100982.12	novel	2689	17	NA	NA	-286	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_11	100.577192376292	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	9219	False	NA	22	True	AATACA	-14	NA	45934396	45948020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944244_45944321_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_121062.known	chr20	+	2689	17	FSM	ENSG00000100982.12	ENST00000372409.8	2689	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	47.6299210056032	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	-11	True	NA	22	True	AATACA	-14	NA	45934682	45948020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_121063.nnic	chr20	+	2642	17	NNC	ENSG00000100982.12	novel	2689	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	87.2634078165069	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	-16	True	NA	22	True	AATACA	-14	NA	45934677	45948020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947575
transcript_121074.nic	chr20	+	2782	16	ISM	ENSG00000100982.12	ENST00000372409.8	2689	17	-5	-3	-5	0	intron_retention	FALSE	canonical	3	232	junction_4	49.1914174989454	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGGGTCTTGAGGGC	-16	True	NA	25	True	AATACA	-17	NA	45934677	45948023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262
transcript_12109.known	chr1	+	890	2	FSM	ENSG00000081026.19	ENST00000477955.1	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTATTTCCTAATTATT	288	False	NA	NA	False	AATAAA	-22	NA	113391260	113404455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113391350_113403654
transcript_121099.known	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	39	False	NA	5	True	GATAAA	-21	NA	45934732	45937972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45934805_45937417
transcript_12110.known	chr1	+	6874	21	FSM	ENSG00000081026.19	ENST00000307546.14	6874	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.96760360525769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATGGCCTGCATTTCTT	5	True	NA	58	True	TTTAAA	-8	NA	113390514	113685923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113391350_113549514_113549632_113580541_113580662_113585386_113585597_113590483_113590659_113594480_113594561_113614600_113614659_113619735_113619831_113622805_113622995_113641910_113642517_113643742_113643775_113646485_113646643_113649236_113649329_113651013_113651207_113653829_113654019_113659079_113659266_113671733_113671837_113672614_113672742_113673321_113673466_113681197_113681337_113682896
transcript_121102.known	chr20	-	4454	28	FSM	ENSG00000198026.8	ENST00000322927.3	4454	28	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_26	11.3094640921719	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTACTTTGTCTGCTTG	-11	True	NA	-7	True	AATAAA	-23	NA	45972203	45948659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967635_45967733_45968028_45968284_45968363_45969450_45969692_45971209_45971461_45972121
transcript_12112.known	chr1	-	3657	19	FSM	ENSG00000116793.16	ENST00000369604.6	3657	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	65.082853177913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCTATAATCGGCC	22	True	NA	NA	False	ATTAAA	-22	NA	113759486	113696830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
transcript_121127.known	chr20	+	2336	13	FSM	ENSG00000100985.7	ENST00000372330.3	2336	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	8.25126252965771	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	6	True	NA	21	True	AATAAA	-21	NA	46008907	46016561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46009065_46009865_46010099_46010482_46010632_46010921_46011051_46011142_46011317_46011573_46011748_46012136_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_121129.known	chr20	+	401	2	FSM	ENSG00000124140.15	ENST00000628272.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	9	True	NA	5	True	AATAAA	-15	NA	46021698	46023581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46021887_46023368
transcript_121132.nnic	chr20	-	3274	8	NNC	ENSG00000124160.12	novel	3224	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	43.1475872525253	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	NA	False	NA	-21	True	AATAAA	-35	NA	46089989	46060990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_46062890_46063336_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_121133.known	chr20	-	3224	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	28.5442728091658	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-26	True	NA	-21	True	AATAAA	-35	NA	46089962	46060990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_121139.nic	chr20	-	3157	7	NIC	ENSG00000124160.12	novel	3224	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	57.4787400310372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-26	True	NA	-21	True	AATAAA	-35	NA	46089962	46060990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46089816
transcript_121145.known	chr20	+	1682	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_6	17.7301825991725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGGGGGTGAACATG	2	True	NA	NA	False	ATTAAA	-22	NA	46118313	46129858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_121149.nnic	chr20	+	1443	9	NNC	ENSG00000101017.14	novel	1682	9	NA	NA	-27	-143	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_6	34.8308412186671	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	-10	True	NA	7	True	AATAAA	-21	NA	46118250	46129516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_121150.nnic	chr20	+	1586	9	NNC	ENSG00000101017.14	novel	1682	9	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_6	34.8308412186671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAAGGGTTCTGGAA	-10	True	NA	19	True	TATAAA	-22	NA	46118250	46129659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_121151.known	chr20	+	1623	8	FSM	ENSG00000101017.14	ENST00000372276.7	1623	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	50.4065107553639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGGTGAACATGCTGGG	4	True	NA	NA	False	ATTAAA	-27	NA	46118315	46129863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46128137_46128225_46128329_46128359_46128881
transcript_121152.known	chr20	+	822	8	FSM	ENSG00000101017.14	ENST00000466205.5	822	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	43.5477687518581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCTGGCACTGACTG	36	False	NA	NA	False	NA	NA	NA	46118347	46129126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_121155.nnic	chr20	+	1349	8	NNC	ENSG00000101017.14	novel	1733	10	NA	NA	-27	-143	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	52.0843115554394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	-10	True	NA	7	True	AATAAA	-21	NA	46118250	46129516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_12117.nic	chr1	-	2813	17	NIC	ENSG00000116793.16	novel	2747	15	NA	NA	-51	-150	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	54.1170245278692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCATCATTAATTTTT	-32	True	NA	-1	True	ATTAAA	-26	NA	113759540	113700024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
transcript_121171.known	chr20	-	2175	11	FSM	ENSG00000080189.15	ENST00000317734.12	2175	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	73.2424057496748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTTTTAACAACTAAGA	NA	False	NA	NA	False	ATTAAA	-22	NA	46364458	46349529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358559_46358690_46358764_46364370
transcript_121195.known	chr20	-	5740	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	68.5556455969155	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGGGCTTTTTATT	5	True	NA	2	True	ATTAAA	-24	NA	46364404	46345979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_121200.nic	chr20	-	2043	10	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	-17	-210	intron_retention	FALSE	canonical	3	24	junction_8	74.12518606976	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACTGCATTCTGGAGA	NA	False	NA	-17	True	AATAAA	-12	NA	46364475	46349739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357703_46358386_46358764_46364370
transcript_121204.known	chr20	-	5820	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	29.9666481275434	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-16	True	NA	-2	True	ATTAAA	-20	NA	46364425	46345983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_121210.known	chr20	-	2447	10	FSM	ENSG00000080189.15	ENST00000243896.6	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	77.4395821843641	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	8	True	NA	NA	False	ATTAAA	-24	NA	46364401	46349527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358959_46364370
transcript_12123.nic	chr1	-	2337	13	ISM	ENSG00000116793.16	ENST00000369604.6	3657	19	-47	8934	-44	0	5prime_fragment	FALSE	canonical	3	131	junction_12	55.4328923614451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	-25	True	NA	-8	True	AATAAA	-16	NA	113759533	113705764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
transcript_121289.nnic	chr20	-	3723	23	NNC	ENSG00000062598.18	novel	3666	22	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	68.5417770896814	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-24	True	NA	-14	True	AATAAA	-19	NA	46406636	46366049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46382205_46382242_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_121297.known	chr20	-	3678	22	FSM	ENSG00000062598.18	ENST00000372176.5	3678	22	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_18	60.5712039528629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	53	False	NA	-14	True	AATAAA	-19	NA	46406559	46366049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46393980_46394090_46394404_46394533_46398696_46398772_46406547
transcript_121298.nic	chr20	-	3658	22	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_20	43.8405169872028	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-24	True	NA	-14	True	AATAAA	-19	NA	46406636	46366049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46398696_46398772_46406547
transcript_12130.nic	chr1	-	1431	4	NIC	ENSG00000116793.16	novel	956	3	NA	NA	-456	308	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	70.0587055420111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAATGCAGGAATCATA	NA	False	NA	NA	False	AAAAAG	-15	NA	113759945	113749213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_113749590_113757698_113757756_113758658_113758734_113759022
transcript_121300.known	chr20	-	3666	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_20	37.3412892397433	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-3	True	NA	-14	True	AATAAA	-19	NA	46406615	46366049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_121301.known	chr20	-	3574	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_20	45.596573336162	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGTGGTTCCTGTTA	-20	True	NA	-19	True	AATAAA	-14	NA	46406632	46366054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
transcript_121302.nic	chr20	-	3612	21	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_20	46.7556146361055	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-24	True	NA	-14	True	AATAAA	-19	NA	46406636	46366049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46406547
transcript_12132.known	chr1	-	956	3	FSM	ENSG00000116793.16	ENST00000493212.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	85.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCAGAGTCTGGTGA	19	True	NA	NA	False	NA	NA	NA	113759489	113749521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113749590_113757698_113757756_113758658
transcript_121324.known	chr20	-	3487	6	FSM	ENSG00000198185.12	ENST00000457685.6	3487	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	34.0681669597881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATGCCAAATGTGCCTC	-8	True	NA	3	True	NA	NA	NA	46513559	46501061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46506306_46506459_46512081_46512141_46512539
transcript_121331.known	chr20	-	3890	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	30.5736814924209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGCCAAATTTGT	-3	True	NA	-12	True	AGTAAA	-18	NA	46513554	46499631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
transcript_121341.known	chr20	-	4041	13	FSM	ENSG00000158296.14	ENST00000279027.9	4041	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_12	14.5971363249402	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCATGTTCTGGTTCAT	0	True	NA	-6	True	AATAAA	-14	NA	46651459	46557827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46560199_46563413_46563552_46566228_46566391_46575572_46575686_46583571_46583670_46588058_46588164_46589159_46589256_46592403_46592530_46596156_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46651310
transcript_121351.nic	chr20	-	2314	5	ISM	ENSG00000158296.14	ENST00000495082.5	1887	12	30184	-1565	4389	0	3prime_fragment	FALSE	canonical	3	35	junction_2	2.8613807855649	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGACCTGGAGATGA	4546	False	NA	-14	True	AATAAA	-12	NA	46583702	46558428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_46560199_46563413_46563552_46566228_46566391_46575572_46575686_46583571
transcript_121359.known	chr20	-	876	4	FSM	ENSG00000158296.14	ENST00000417157.2	876	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	NA	False	NA	3	True	ATTAAA	-28	NA	46670139	46608708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042
transcript_12136.known	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	24.2794151494635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-4	True	NA	NA	False	ATTAAA	-20	NA	113905070	113894747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
transcript_121360.known	chr20	-	2012	2	FSM	ENSG00000172315.6	ENST00000372102.3	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTACTGTCTTGTTTC	5	True	NA	NA	False	NA	NA	NA	46689440	46685533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46687232_46689126
transcript_121361.known	chr20	-	3180	2	FSM	ENSG00000172315.6	ENST00000372114.4	3180	2	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTCTCGGGTATGTCTT	1	True	NA	-21	True	ATTAAA	-19	NA	46689444	46684364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46687232_46689131
transcript_121362.known	chr20	+	4227	5	FSM	ENSG00000197496.6	ENST00000359271.4	4227	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	3.34477204006491	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTGCAACAAACATATC	5	True	NA	29	True	AATAAA	-38	NA	46709648	46736347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46709741_46725040_46726325_46726863_46726987_46729352_46729489_46733755
transcript_121366.known	chr20	+	497	2	FSM	ENSG00000197496.6	ENST00000486000.2	497	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCATTCTGATTGAGC	27	False	NA	NA	False	AATAAA	-15	NA	46709698	46710437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46709741_46709982
transcript_121367.known	chr20	+	2483	16	FSM	ENSG00000064655.19	ENST00000327619.10	2483	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_14	4.96386945839634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGGATGTGGTTAC	-18	True	NA	11	True	AATAAA	-20	NA	46894842	47188844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46894988_46990000_46990120_47001427_47001474_47004941_47005085_47016180_47016298_47072184_47072253_47074157_47074336_47089238_47089382_47097084_47097169_47143058_47143149_47169138_47169198_47172706_47172868_47179797_47179913_47180814_47180937_47183290_47183392_47188052
transcript_121369.nic	chr20	+	2494	14	NIC	ENSG00000064655.19	novel	2483	16	NA	NA	-38	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	6.75260195303223	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGGATGTGGTTAC	19	False	NA	11	True	AATAAA	-20	NA	46894585	47188844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_46894988_46990000_46990120_47001427_47001474_47004941_47005085_47016180_47016298_47089238_47089382_47097084_47097169_47143058_47143149_47169138_47169198_47172706_47172868_47179797_47179913_47180814_47180937_47183290_47183392_47188052
transcript_121377.nnic	chr20	-	4179	23	NNC	ENSG00000101040.20	novel	5273	23	NA	NA	-12292	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_8	85.4705618452854	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACCAACCCCAACAACAA	2353	False	NA	66	True	ATTAAA	-45	NA	47369181	47210412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_121380.nnic	chr20	-	4060	23	NNC	ENSG00000101040.20	novel	4139	24	NA	NA	-12386	0	at_least_one_novel_splicesite	FALSE	canonical	3	218	junction_20	64.078464297897	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACCAACCCCAACAACAA	2259	False	NA	66	True	ATTAAA	-45	NA	47369275	47210412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_121382.nnic	chr20	-	4258	23	NNC	ENSG00000101040.20	novel	4139	24	NA	NA	-12509	0	at_least_one_novel_splicesite	FALSE	canonical	3	236	junction_20	62.1893270320094	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACCAACCCCAACAACAA	2136	False	NA	66	True	ATTAAA	-45	NA	47369398	47210412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_12140.known	chr1	-	3173	10	FSM	ENSG00000134262.13	ENST00000369569.6	3173	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	18.5771663907904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCGAATCCAGAATGGGAA	50	True	NA	NA	False	AATAAA	-19	NA	113904799	113894193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604
transcript_121407.nnic	chr20	-	3854	22	NNC	ENSG00000101040.20	novel	4991	22	NA	NA	-12292	0	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_1	79.7824422742128	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACGATTTAAAAAAAA	2353	False	NA	38	True	ATTAAA	-17	NA	47369181	47210440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_121408.nnic	chr20	-	3939	22	NNC	ENSG00000101040.20	novel	3832	22	NA	NA	-12302	0	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_1	78.2372982018933	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACGATTTAAAAAAAA	2343	False	NA	38	True	ATTAAA	-17	NA	47369191	47210440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_121472.nnic	chr20	-	717	6	NNC	ENSG00000101040.20	novel	670	7	NA	NA	-12298	0	at_least_one_novel_splicesite	FALSE	canonical	3	218	junction_3	92.1555207244797	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	2347	False	NA	NA	False	AATACA	-36	NA	47369187	47291795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_121474.nnic	chr20	-	846	6	NNC	ENSG00000101040.20	novel	5362	22	NA	NA	-12352	0	at_least_one_novel_splicesite	FALSE	canonical	3	236	junction_3	86.3388672615063	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	2293	False	NA	NA	False	AATACA	-36	NA	47369241	47291795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_121481.nnic	chr20	-	319	3	NNC	ENSG00000101040.20	novel	341	3	NA	NA	-12298	0	at_least_one_novel_splicesite	FALSE	canonical	3	322	junction_2	42.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGAAACCTGGC	2347	False	NA	NA	False	NA	NA	NA	47369187	47310102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47310205_47347855_47347927_47369041
transcript_121482.known	chr20	-	4053	23	FSM	ENSG00000101040.20	ENST00000471951.7	5281	23	2	1226	2	1	multi-exon	FALSE	canonical	3	63	junction_22	105.816697896499	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACGATTTAAAAAAAAA	5	True	NA	39	True	ATTAAA	-18	NA	47356697	47210439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
transcript_121483.known	chr20	-	3832	22	FSM	ENSG00000101040.20	ENST00000352431.6	3832	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_21	101.704342299778	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACGATTTAAAAAAAA	3	True	NA	38	True	ATTAAA	-17	NA	47356699	47210440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
transcript_121484.known	chr20	+	1809	2	FSM	ENSG00000231119.2	ENST00000413818.2	1809	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTACTGGACACTCAT	11	False	NA	NA	False	ATTAAA	-30	NA	47352560	47354633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_47352741_47353004
transcript_121487.nic	chr20	+	910	2	ISM	ENSG00000124151.19	ENST00000371997.3	6750	23	-30	71759	9	-40090	5prime_fragment	FALSE	canonical	3	49	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAATTTTAAGGAGGC	13	True	NA	NA	False	AATAGA	-6	NA	47501910	47583983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_47502020_47583182
transcript_121488.nic	chr20	-	3793	21	FSM	ENSG00000196562.15	ENST00000688720.1	3808	21	15	0	15	0	multi-exon	FALSE	canonical	3	165	junction_1	36.0618912426955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTGTGTCTGTTT	13	True	NA	-5	True	NA	NA	NA	47785466	47657405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
transcript_121489.known	chr20	-	4915	21	FSM	ENSG00000196562.15	ENST00000359930.8	4915	21	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_20	60.8823455527134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	47786586	47656911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785834
transcript_121490.known	chr20	-	3905	21	FSM	ENSG00000196562.15	ENST00000467815.5	3905	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	83.5759983488083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	17	True	NA	-33	True	AATAAA	-27	NA	47786554	47657667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47658393_47659398_47659453_47659696_47659722_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47786047
transcript_121491.nic	chr20	-	3531	21	FSM	ENSG00000196562.15	ENST00000688720.1	3808	21	15	262	15	0	multi-exon	FALSE	canonical	3	165	junction_1	36.0618912426955	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	13	True	NA	-33	True	AATAAA	-27	NA	47785466	47657667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
transcript_121496.nic	chr20	-	3710	20	NIC	ENSG00000196562.15	novel	3808	21	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	36.9628097887488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTGTAAAAGGCCAT	13	True	NA	-34	True	NA	NA	NA	47785466	47657434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
transcript_12150.known	chr1	-	2418	7	FSM	ENSG00000081019.14	ENST00000615321.1	2418	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	11.2842072532072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAAGCATATCTTTT	-12	True	NA	NA	False	TATAAA	-18	NA	113812289	113765847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_121501.nic	chr20	-	3477	20	NIC	ENSG00000196562.15	novel	3808	21	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	36.9628097887488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	13	True	NA	-33	True	AATAAA	-27	NA	47785466	47657667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
transcript_121502.nic	chr20	-	3579	20	NIC	ENSG00000196562.15	novel	4915	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_19	62.8691645877029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	775	False	47786091	-33	True	AATAAA	-27	NA	47786060	47657667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785834
transcript_121506.known	chr20	+	9031	39	FSM	ENSG00000124198.10	ENST00000371917.5	9031	39	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	19.9207049959239	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTTTCTAATGTGTAG	-11	True	NA	10	True	AATAAA	-14	NA	48921710	49036693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965871_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
transcript_12153.known	chr1	-	6621	7	FSM	ENSG00000081019.14	ENST00000261441.9	6621	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	11.2842072532072	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTTCATCACAAAAT	5	True	NA	-15	True	AATAAA	-22	NA	113812476	113761831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_121531.known	chr20	+	3550	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	0	0	0	0	multi-exon	FALSE	canonical	3	1698	junction_14	170.075550001561	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	-8	True	NA	16	True	AATAAA	-22	NA	49046311	49096949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_12154.known	chr1	+	3755	4	FSM	ENSG00000118655.7	ENST00000650450.2	3755	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	15.5777619273972	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTTTTATTTCC	-16	True	NA	21	True	AATGAA	-15	NA	113905325	113914086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113905776_113906995_113907162_113908008_113908192_113911130
transcript_121545.known	chr20	+	3459	24	FSM	ENSG00000124207.17	ENST00000396192.7	3459	24	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	435.063504914086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGTTTTCAGTGCTCT	NA	False	NA	27	True	AATAAA	-33	NA	49046245	49096960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_12157.known	chr1	+	1960	3	FSM	ENSG00000118655.7	ENST00000648795.1	1960	3	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	25	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAACTTAATCTGTTTAA	-9	True	NA	15	True	ATTAAA	-18	NA	113905332	113912464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113905776_113908008_113908192_113911130
transcript_121572.known	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	289.446114595511	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	5	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
transcript_121573.known	chr20	-	3334	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	287.3041396135	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_121582.known	chr20	-	3211	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_8	89.0637646109049	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_121591.known	chr20	-	3154	12	FSM	ENSG00000124214.21	ENST00000371802.5	3154	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	292.305512087429	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49188115
transcript_1216.known	chr1	+	2612	16	FSM	ENSG00000197785.14	ENST00000378755.9	2612	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.208919540657	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	18	True	NA	30	True	AATAAA	-18	NA	1512174	1534685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1512474_1516011_1516089_1517166_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_121605.known	chr20	-	1085	7	FSM	ENSG00000124214.21	ENST00000437404.2	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	374.346282055651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACTTTTCTGAACAC	-1	True	NA	NA	False	AGTAAA	-38	NA	49188367	49124374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_121608.nic	chr20	-	983	6	ISM	ENSG00000124214.21	ENST00000360426.8	3211	13	-51	10864	-51	-12	5prime_fragment	FALSE	canonical	3	637	junction_1	93.9531798291042	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGTCAAGGTGAGAAC	61	False	NA	NA	False	AGTAAA	-26	NA	49188418	49124386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_12161.nnic	chr1	-	715	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_4	10.9544511501033	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032223	114014903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032039
transcript_121616.nic	chr20	+	2667	22	NIC	ENSG00000124228.15	novel	2570	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	153.78080227191	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	-11	True	NA	33	True	ATTAAA	-27	NA	49219411	49244073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49231022_49231116_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_121626.known	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_12	53.041375359242	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	-7	True	NA	33	True	ATTAAA	-27	NA	49219415	49244073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_12163.nnic	chr1	-	580	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	34	junction_4	27.3313007374329	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032267	114014903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032218
transcript_121635.known	chr20	+	4929	19	FSM	ENSG00000124228.15	ENST00000484427.5	4929	19	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_11	48.7038163637621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTATATCTTATTA	NA	False	NA	37	True	ATTAAA	-31	NA	49219346	49244077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_121645.nic	chr20	+	2054	17	ISM	ENSG00000124228.15	ENST00000618172.5	2570	21	-73	2130	-4	-2130	5prime_fragment	FALSE	canonical	3	434	junction_12	44.4061070546609	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGTTTATGAAGGAT	NA	False	NA	NA	False	AAGAAA	-2	NA	49219342	49241943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892
transcript_121649.nic	chr20	+	1981	16	ISM	ENSG00000124228.15	ENST00000618172.5	2570	21	-73	4757	-4	-4757	5prime_fragment	FALSE	canonical	3	434	junction_12	45.5130750444309	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGGAAGAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	49219342	49239316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235
transcript_12165.known	chr1	+	1934	4	FSM	ENSG00000116774.12	ENST00000369551.5	1934	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.231579774185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	-28	True	NA	17	True	ATTAAA	-18	NA	113979440	113982254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113979631_113979974_113980127_113980331_113980618_113980948
transcript_121656.nic	chr20	-	3139	8	ISM	ENSG00000124201.15	ENST00000396105.6	7209	14	-390	11517	-21	-1484	5prime_fragment	FALSE	canonical	3	11	junction_7	12.1285630153092	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACTCACTTCCTTGGGT	-11	True	NA	NA	False	NA	NA	NA	49278447	49257416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_49257665_49260462_49260578_49263333_49263484_49264715_49264865_49266134_49266267_49269941_49271751_49275778_49275888_49278020
transcript_12166.nic	chr1	+	2586	3	NIC	ENSG00000116774.12	novel	1748	3	NA	NA	-398	0	intron_retention	FALSE	canonical	2	8	junction_1	108.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGTGTTTGTTTGG	NA	False	NA	16	True	ATTAAA	-17	NA	113978992	113982253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_113979631_113979974_113980618_113980948
transcript_121662.known	chr20	+	2608	5	FSM	ENSG00000177410.13	ENST00000371743.8	2608	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	225.169935826255	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTCTGTGCTTCCTGC	1376	False	NA	NA	False	ACTAAA	-34	NA	49278177	49290860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_121663.known	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	264.565091234652	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	-2	True	NA	21	True	AATAAA	-17	NA	49278639	49289260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_121666.known	chr20	+	946	4	FSM	ENSG00000177410.13	ENST00000441722.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_3	283.706812670326	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49289044
transcript_121668.known	chr20	+	504	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	300.428952592049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	0	True	NA	21	True	AATAAA	-17	NA	49278641	49289260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
transcript_12167.known	chr1	+	1748	3	FSM	ENSG00000116774.12	ENST00000320334.5	1748	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	11.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGTGTTTGTTTGG	5	True	NA	16	True	ATTAAA	-17	NA	113979473	113982253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113979631_113980331_113980618_113980948
transcript_121670.known	chr20	+	860	3	FSM	ENSG00000177410.13	ENST00000417721.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	383.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103_49279209_49289044
transcript_121672.known	chr20	+	627	2	FSM	ENSG00000177410.13	ENST00000667889.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATTCTCACAGTT	0	True	NA	NA	False	AAAAAG	-15	NA	49278641	49279655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103
transcript_121673.known	chr20	+	640	2	FSM	ENSG00000177410.13	ENST00000663883.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTGAATGTTTTATT	0	True	NA	NA	False	AAAAAG	-6	NA	49278641	49279646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278739_49279103
transcript_121674.known	chr20	-	5570	10	FSM	ENSG00000124212.6	ENST00000244043.5	5570	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	7.67551823963135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGAGTGTGATTCT	-8	True	NA	-5	True	ATTAAA	-19	NA	49568137	49503873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49508065_49511027_49511180_49513079_49513262_49514226_49514396_49524057_49524240_49539569_49539722_49544304_49544449_49547840_49548020_49550065_49550190_49568042
transcript_121675.nic	chr20	-	2578	9	ISM	ENSG00000124212.6	ENST00000244043.5	5570	10	-48	6003	-48	-1976	5prime_fragment	FALSE	canonical	3	43	junction_4	7.76108078813769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAACTGCAG	419	False	NA	NA	False	AAAAAG	-5	NA	49568185	49509876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_49511180_49513079_49513262_49514226_49514396_49524057_49524240_49539569_49539722_49544304_49544449_49547840_49548020_49550065_49550190_49568042
transcript_121676.known	chr20	-	4722	9	FSM	ENSG00000158470.5	ENST00000371711.4	4722	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	21.9074758929458	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGGTCATTTCTCTT	-6	True	NA	0	True	AGTAAA	-23	NA	49713878	49632944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49636460_49637340_49637443_49639677_49639801_49640477_49640666_49642467_49642585_49643525_49643651_49646964_49647079_49656567_49656703_49713575
transcript_121679.known	chr20	+	6309	16	FSM	ENSG00000197818.12	ENST00000417961.5	6309	16	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_6	12.6357517474119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGTCTGTGTTCATG	4	True	NA	20	True	AATAAA	-20	NA	49812712	49892241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49812949_49815007_49815190_49823060_49823142_49839540_49839600_49845035_49845120_49849578_49849681_49850761_49850845_49855437_49855582_49862928_49863068_49864738_49864845_49874704_49874822_49877980_49878064_49880923_49881036_49883845_49884067_49886751_49886899_49887828
transcript_12168.known	chr1	+	2063	2	FSM	ENSG00000116774.12	ENST00000491700.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	22	True	NA	17	True	ATTAAA	-18	NA	113979490	113982254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113979631_113980331
transcript_121681.known	chr20	+	6147	16	FSM	ENSG00000197818.12	ENST00000361573.3	6147	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	11.400974617208	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTCTGTGTTCATGT	-43	True	NA	21	True	AATAAA	-21	NA	49812827	49892242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49812949_49815007_49815190_49823060_49823142_49839540_49839600_49845035_49845120_49849578_49849681_49850809_49850845_49855437_49855582_49862928_49863068_49864738_49864845_49874704_49874822_49877980_49878064_49880923_49881036_49883845_49884067_49886751_49886899_49887828
transcript_121688.nnic	chr20	-	2730	3	NNC	ENSG00000158480.11	novel	4043	3	NA	NA	0	-1435	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	36.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAACGTGGTTA	-7	True	NA	-12	True	AATAAA	-13	NA	49915529	49904828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_49906846_49908154_49908593_49915254
transcript_121689.known	chr20	-	4043	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-7	True	NA	NA	False	AATAAA	-19	NA	49915529	49903390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49906846_49908154_49908593_49915379
transcript_121691.known	chr20	+	2447	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_2	74.0664566453668	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	5	True	NA	18	True	AATAAA	-19	NA	49936396	49953885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_121695.known	chr20	+	624	5	FSM	ENSG00000124226.11	ENST00000623528.3	624	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	452.649077652877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTATCTGTCTCATGT	NA	False	NA	-32	True	NA	NA	NA	49936335	49952152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49936553_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_121697.known	chr20	+	1705	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	0.5	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	0	True	NA	NA	False	AATAAA	-24	NA	49982979	49988886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49983142_49983823_49984352_49987871
transcript_121698.known	chr20	-	2028	7	FSM	ENSG00000240849.11	ENST00000453505.6	2028	7	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	109.89957537073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTGAGACAGTGAATTA	-6	True	NA	NA	False	NA	NA	NA	50153734	50124043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130855_50130948_50143501_50143622_50151211_50151316_50153516
transcript_121702.known	chr20	-	2222	6	FSM	ENSG00000240849.11	ENST00000371650.9	2222	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	99.4545122153842	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAACCACAGCGGAAAA	-6	True	NA	29	True	AAGAAA	-10	NA	50153734	50123736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130864_50130948_50143501_50143622_50153516
transcript_12171.known	chr1	+	2119	1	FSM	ENSG00000282048.1	ENST00000632517.1	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGACTCACCTGGAA	15	False	NA	27	True	AATAAA	-16	NA	114032392	114034511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_114032400_114034500
transcript_121710.known	chr20	-	2459	5	FSM	ENSG00000244687.13	ENST00000371677.7	2459	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	1712.66727285249	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484_50115622_50115698
transcript_121713.known	chr20	-	813	5	FSM	ENSG00000240849.11	ENST00000371658.3	813	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	98.8774494007607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATGGAGAGGACATCT	88	False	NA	NA	False	NA	NA	NA	50153640	50124968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50143501_50143622_50153516
transcript_121716.known	chr20	-	549	4	FSM	ENSG00000244687.13	ENST00000490555.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1629.95507777225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGCAAGAGCTTCGG	12	True	NA	-83	True	NA	NA	NA	50113133	50082856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096482_50096821_50113106
transcript_121717.known	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	3400	junction_3	59.218990947912	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50113150	50081123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
transcript_121718.known	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1585.38771984087	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
transcript_121724.known	chr20	-	1983	3	FSM	ENSG00000244687.13	ENST00000396059.7	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	1720	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50113172	50081123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50113106
transcript_121725.known	chr20	-	2387	3	FSM	ENSG00000244687.13	ENST00000415862.6	2387	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1767	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50115484
transcript_121728.known	chr20	-	566	3	FSM	ENSG00000244687.13	ENST00000467839.5	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	3400	junction_2	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCAGTGAGGTAGAGAT	-1	True	NA	NA	False	NA	NA	NA	50113146	50083877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50084255_50096671_50096821_50113106
transcript_121729.known	chr20	-	649	3	FSM	ENSG00000244687.13	ENST00000461960.5	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTCAAGAAATTGATTT	2824	False	NA	NA	False	NA	NA	NA	50113125	50095789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50096271_50096671_50096821_50113106
transcript_121732.known	chr20	-	1973	3	FSM	ENSG00000244687.13	ENST00000371657.9	1973	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1692.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	6	True	NA	-3	True	AATAAA	-25	NA	50113139	50081123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50096671_50096821_50113106
transcript_121733.known	chr20	+	764	3	FSM	ENSG00000231742.6	ENST00000411453.3	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCTTCATTTCAGAG	NA	False	NA	NA	False	AATAAA	-21	NA	50172515	50176676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50172789_50172922_50173018_50176280
transcript_121734.known	chr20	+	740	3	FSM	ENSG00000231742.6	ENST00000427333.6	740	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	50172534	50173592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50172789_50172922_50173018_50173201
transcript_121738.known	chr20	+	1839	1	FSM	ENSG00000172216.6	ENST00000303004.5	1839	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTTTTGGGGGCAGT	-1	True	NA	24	True	AATAAA	-21	NA	50190829	50192668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50190800_50192700
transcript_121740.known	chr20	+	3979	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	10.9521969158681	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTTTTTGACTTTTTG	11	True	NA	NA	False	ATTAAA	-21	NA	50510382	50585241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_121743.nic	chr20	+	4568	9	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-33	675	29	-194	intron_retention	FALSE	canonical	3	47	junction_8	10.7441844734721	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGTGTTTTGGTATAAT	-22	True	NA	3	True	AATAAA	-30	NA	50510349	50584566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264
transcript_121746.known	chr20	+	3469	9	FSM	ENSG00000196396.10	ENST00000541713.5	3469	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.2171801940825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGGTGCTTCCCATT	NA	False	NA	20	True	AATAAA	-21	NA	50510320	50584760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50510591_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_121748.nic	chr20	+	571	5	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-33	10686	29	-10205	5prime_fragment	FALSE	canonical	3	51	junction_4	10.3772587902586	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGATCTTTGAAGACAC	-22	True	NA	NA	False	AAAAAG	-9	NA	50510349	50574555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516
transcript_121765.known	chr20	+	4579	3	FSM	ENSG00000124171.9	ENST00000371610.7	4579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGTTTGAAATTATA	0	True	NA	NA	False	AATAAA	-22	NA	50731579	50753741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50731853_50737856_50738080_50749658
transcript_121770.known	chr20	+	787	6	FSM	ENSG00000124243.19	ENST00000609336.5	787	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	116.635500599089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGAGATGGGGTCTCACT	-22	True	NA	NA	False	TTTAAA	-15	NA	50795030	50876723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50875996_50876094_50876485
transcript_121773.known	chr20	+	1114	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	13.838352503098	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	8	True	NA	16	True	AATAAA	-16	NA	50795060	50877177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
transcript_121775.known	chr20	+	365	4	FSM	ENSG00000124243.19	ENST00000445038.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	103.428987984779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCACCCCCGCACCTG	17	True	NA	NA	False	NA	NA	NA	50795069	50876572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50876485
transcript_121779.known	chr20	-	1084	10	FSM	ENSG00000000419.14	ENST00000371584.9	1084	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	140.341734595008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTCTCAATTTTCGT	-1	True	NA	-30	True	ATTAAA	-27	NA	50958532	50934944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941104_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_121780.known	chr20	-	1161	10	FSM	ENSG00000000419.14	ENST00000371582.8	1161	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	137.611727895267	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	585	False	NA	-16	True	AATAAA	-26	NA	50958555	50934866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941128_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_121783.known	chr20	-	1054	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_8	14.3874945699382	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-1	True	NA	-19	True	AATAAA	-23	NA	50958532	50934869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_121784.known	chr20	-	1097	9	FSM	ENSG00000000419.14	ENST00000466152.5	1097	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.166551086398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-1	True	NA	-16	True	AATAAA	-26	NA	50958550	50934866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940956_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_121787.nic	chr20	-	1003	8	NIC	ENSG00000000419.14	novel	1097	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	112.805051269155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-1	True	NA	-19	True	AATAAA	-23	NA	50958550	50934869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_50935237_50936147_50936263_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_121788.known	chr20	-	959	7	FSM	ENSG00000000419.14	ENST00000683048.1	959	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	155.189579403888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-1	True	NA	-19	True	AATAAA	-23	NA	50958532	50934869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_12180.nnic	chr1	-	1906	9	NNC	ENSG00000134207.17	novel	1897	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	134.124941752084	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	1	True	NA	15	True	NA	NA	NA	114152922	114091764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114142686_114142780_114152765
transcript_121808.nic	chr20	-	2436	5	NIC	ENSG00000026559.14	novel	967	4	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	84.1382790411118	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	NA	False	NA	0	True	AATACA	-17	NA	51023180	51003655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51013728_51013845_51022869
transcript_121823.nic	chr20	-	2516	4	NIC	ENSG00000026559.14	novel	2189	3	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	98.1201078044432	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	NA	False	NA	0	True	AATACA	-17	NA	51023160	51003655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51022653
transcript_121824.nic	chr20	-	2308	4	NIC	ENSG00000026559.14	novel	2189	3	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_3	62.7853486093691	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	NA	False	NA	0	True	AATACA	-17	NA	51023168	51003655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51022869
transcript_121830.known	chr20	-	967	4	FSM	ENSG00000026559.14	ENST00000424171.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	52.6265670128269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGAGGAAGAGGACGACG	31	False	NA	NA	False	NA	NA	NA	51023094	51009796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51010365_51012358_51012417_51013728_51013845_51022869
transcript_121836.nnic	chr20	-	2437	3	NIC	ENSG00000026559.14	novel	2189	3	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	125.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	-14	True	NA	0	True	AATACA	-17	NA	51023139	51003655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51022653
transcript_121837.known	chr20	-	2189	3	FSM	ENSG00000026559.14	ENST00000371571.5	2189	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	80.5	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	18	True	NA	0	True	AATACA	-17	NA	51023107	51003655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51004807_51009564_51010365_51022869
transcript_121839.known	chr20	-	802	3	FSM	ENSG00000026559.14	ENST00000433903.5	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	74	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGACGACATCCTCAACG	44	False	NA	NA	False	NA	NA	NA	51023081	51010048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51010365_51012358_51012417_51022653
transcript_12184.known	chr1	-	4352	8	FSM	ENSG00000134207.17	ENST00000607941.5	4352	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	113.474981509456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATTTTATGT	1428	False	NA	-3	True	ATTAAA	-18	NA	114152440	114089291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152217
transcript_121840.known	chr20	-	1096	3	FSM	ENSG00000026559.14	ENST00000439216.5	1096	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	31.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCCCACGCCCCGCG	18	True	NA	NA	False	NA	NA	NA	51023107	51009564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51010365_51012358_51012417_51022869
transcript_121844.known	chr20	-	7862	28	FSM	ENSG00000054793.14	ENST00000338821.6	7862	28	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_21	9.80103854971243	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGCTTCATATTGTAT	-26	True	NA	NA	False	TATAAA	-19	NA	51768390	51596513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51601348_51604816_51605021_51607526_51607585_51608517_51608627_51610100_51610166_51613676_51613833_51617489_51617555_51618661_51618807_51618953_51619044_51622073_51622173_51625191_51625363_51627599_51627684_51628979_51629073_51639342_51639505_51656937_51657151_51669996_51670110_51671114_51671258_51674152_51674314_51676131_51676209_51689063_51689140_51690738_51690820_51694007_51694103_51696092_51696145_51697423_51697483_51712965_51713075_51725818_51725933_51729833_51729979_51768301
transcript_12185.nic	chr1	-	1970	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	279	junction_7	35.3351302328353	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	789	False	NA	15	True	NA	NA	NA	114153079	114091764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_12186.known	chr1	-	1897	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	86.9332373439644	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	18	False	NA	15	True	NA	NA	NA	114153850	114091764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_12189.nic	chr1	-	1949	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	98.8110957993141	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	789	False	NA	15	True	NA	NA	NA	114153079	114091764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097747_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_12190.nic	chr1	-	1919	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	119.724343252936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	NA	False	NA	15	True	NA	NA	NA	114153893	114091764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097747_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_121932.known	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	68.2853490061293	2894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	0	True	NA	15	True	AATAAA	-23	NA	51802521	51782330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
transcript_121937.known	chr20	-	1918	4	FSM	ENSG00000101115.13	ENST00000395997.3	1918	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	190.431673369275	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAACTTGCGTGGAAGG	-14	True	NA	-94	True	AAGAAA	-21	NA	51802475	51784264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51784685_51788860_51789142_51791332_51792353_51802278
transcript_12194.known	chr1	-	4320	7	FSM	ENSG00000134207.17	ENST00000610121.5	4320	7	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	140.965322764935	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGTCATTTTATGTT	0	True	NA	-2	True	ATTAAA	-19	NA	114153868	114089290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114092083_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_121945.known	chr20	-	2545	9	FSM	ENSG00000020256.20	ENST00000361387.6	2545	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	25.3229145242012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	647	False	NA	-5	True	AATAAA	-19	NA	52191697	52084010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
transcript_121950.known	chr20	-	3040	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	21.0580151011438	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	2	True	NA	NA	False	AATAAA	-22	NA	52191768	52151277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
transcript_121954.known	chr20	-	762	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.9462219947249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCGCCAAGTTCAAAAT	1114	False	NA	NA	False	NA	NA	NA	52104923	52085240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
transcript_121955.known	chr20	-	2234	5	FSM	ENSG00000020256.20	ENST00000371523.8	2234	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	2.77263412660235	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	393	False	NA	-5	True	AATAAA	-19	NA	52105644	52084010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52105131
transcript_121957.known	chr20	-	2876	5	FSM	ENSG00000020256.20	ENST00000346617.8	2876	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	30.8494327338446	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	10	True	NA	NA	False	AATAAA	-22	NA	52191760	52151277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52186831_52187072_52191590
transcript_121961.known	chr20	-	5790	6	FSM	ENSG00000171940.14	ENST00000371471.7	5790	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	20.9284495364563	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTTTAGTGTTTAT	-2	True	NA	-24	True	AATATA	-18	NA	53593839	53567070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53593755
transcript_121966.known	chr20	+	1230	4	FSM	ENSG00000101132.10	ENST00000371419.7	1230	4	0	0	0	0	multi-exon	FALSE	canonical	3	2754	junction_1	284.27373349565	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACAAACATTTTGGG	-1	True	NA	10	True	AATAAA	-26	NA	54208086	54219961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_54208125_54214350_54214459_54215299_54215441_54219018
transcript_121969.nic	chr20	+	529	3	ISM	ENSG00000101132.10	ENST00000371419.7	1230	4	-259	4538	-259	1013	5prime_fragment	FALSE	canonical	3	2754	junction_1	336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAGAAGAAGCAAAGGTA	NA	False	NA	18	True	AAGAAA	-10	NA	54207827	54215423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_54208125_54214350_54214459_54215299
transcript_121970.known	chr20	+	1965	8	FSM	ENSG00000101134.12	ENST00000262593.10	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	8.84792146697258	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	-5	True	NA	21	True	AATAAA	-18	NA	54475592	54651169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_54476013_54554932_54555041_54588482_54588598_54588686_54588807_54591615_54591806_54610387_54610524_54643457_54643579_54650414
transcript_121974.known	chr20	+	2987	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	-8	True	NA	NA	False	AATAAA	-22	NA	56358973	56368663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56359192_56365086_56365263_56366070
transcript_121988.known	chr20	-	2112	10	FSM	ENSG00000087586.18	ENST00000371356.6	2112	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	354.226230285424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	8	True	NA	-17	True	AATAAA	-15	NA	56392196	56369389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392167
transcript_121991.nic	chr20	-	2369	10	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_9	318.388108531586	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-12	True	NA	-17	True	AATAAA	-15	NA	56392216	56369389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56391942
transcript_121992.known	chr20	-	2238	10	FSM	ENSG00000087586.18	ENST00000395914.5	2238	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	322.81573691504	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGAGTGCTGTGTAATT	NA	False	NA	-16	True	AATAAA	-16	NA	56392295	56369388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392153
transcript_121993.known	chr20	-	2223	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	310.579903637067	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392295	56369389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
transcript_121997.known	chr20	-	2248	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	267.24836295102	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-1	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
transcript_121998.known	chr20	-	2169	9	FSM	ENSG00000087586.18	ENST00000395913.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	260.641516263238	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392337	56369389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392153
transcript_121999.known	chr20	-	2033	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	224.179057897922	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-11	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
transcript_122.known	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_17	3130.11688429403	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
transcript_122019.known	chr20	-	2145	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	356.335498728826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-11	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
transcript_122021.nic	chr20	+	1822	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-7	-416	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	110.057076101448	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAATTTTCATTTGGTT	-36	True	NA	5	True	ATTAAA	-13	NA	56392363	56404046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_122022.nic	chr20	+	2031	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-7	-207	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	110.057076101448	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	-36	True	NA	11	True	AATAAA	-15	NA	56392363	56404255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_122025.known	chr20	+	4032	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	31.3878957561669	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	-1	True	NA	10	True	AATAAA	-16	NA	56392644	56406362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_122030.nic	chr20	+	2027	6	NIC	ENSG00000101138.12	novel	4032	6	NA	NA	0	-207	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	129.955992551325	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	-1	True	NA	11	True	AATAAA	-15	NA	56392644	56404255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_56392816_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_122042.known	chr20	+	2176	9	FSM	ENSG00000022277.13	ENST00000357348.10	2176	9	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_7	34.8870946769719	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCATGGACTTTT	-31	True	NA	NA	False	AATAAA	-13	NA	56468626	56519449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_122044.known	chr20	+	1572	8	FSM	ENSG00000022277.13	ENST00000395881.7	1572	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	211.382523943138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTTATCTTTTCT	NA	False	NA	34	True	AATAAA	-22	NA	56468613	56518887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56517105_56517202_56518086
transcript_122049.known	chr20	+	2862	7	FSM	ENSG00000087510.7	ENST00000201031.3	2862	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	8.29993306532582	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	-3	True	NA	31	True	AATAAA	-24	NA	56629305	56639283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56629593_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
transcript_122052.known	chr20	-	4021	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	4.32049379893857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCCTGTGTCTGTCT	2	True	NA	-15	True	AATAAA	-21	NA	57266641	57168752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
transcript_122056.known	chr20	-	1746	6	FSM	ENSG00000101144.13	ENST00000395864.7	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	38.484282505979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAATGTCACAATAA	301	False	NA	-65	True	NA	NA	NA	57266342	57170530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57202474_57202624_57228228_57228422_57265704
transcript_122066.nnic	chr20	+	1765	13	NNC	ENSG00000101146.13	novel	2385	12	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	181.387629738696	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCGAGCTTCCTTTGTCC	1958	False	NA	25	True	AATAAA	-17	NA	57351216	57378456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57376178_57376267_57378012
transcript_122069.known	chr20	+	2385	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_9	44.4343698407043	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	5	True	NA	22	True	AATAAA	-19	NA	57351254	57379202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_122073.known	chr20	+	2362	12	FSM	ENSG00000101146.13	ENST00000371242.6	2362	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	133.071285190114	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTTTAAATTCTTT	-27	True	NA	31	True	AATAAA	-28	NA	57351222	57379211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351359_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_122074.known	chr20	+	1503	11	FSM	ENSG00000101146.13	ENST00000527947.5	1503	11	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_9	46.2860670180563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGGTCATGGAGCTTTC	2	True	NA	NA	False	GGGGCT	-23	NA	57351251	57375106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606
transcript_122075.known	chr20	+	1156	11	FSM	ENSG00000101146.13	ENST00000492498.5	1156	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	158.909911585149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGACTCTGGCTCA	24	True	NA	NA	False	NA	NA	NA	57351273	57378099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373662_57373739_57374606_57374802_57378012
transcript_122078.known	chr20	-	3500	11	FSM	ENSG00000124092.13	ENST00000243914.8	3500	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.113552872566	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTATATGTCAGCAT	-3	True	NA	1	True	AATAAA	-23	NA	57525140	57497165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57498702_57503435_57503602_57508605_57508789_57512591_57512753_57514591_57514742_57515713_57515835_57518757_57518892_57519206_57519378_57523067_57523279_57523662_57524217_57525027
transcript_12208.nic	chr1	-	3502	6	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	-6	-3892	combination_of_known_junctions	FALSE	canonical	3	279	junction_5	38.7886581361098	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCCCCACTCTGGTC	-5	True	NA	NA	False	AAAAAG	-10	NA	114152928	114095656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_122080.nnic	chr20	-	1243	5	NNC	ENSG00000124225.16	novel	859	5	NA	NA	49	195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	49.7242395618073	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACCACGTTTCTTTGT	0	True	NA	-35	True	AAAAAG	-13	NA	57709966	57651841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_57652599_57653032_57653087_57659542_57659698_57709473_57709618_57709833
transcript_122081.known	chr20	-	4546	4	FSM	ENSG00000124225.16	ENST00000347215.8	4546	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	55.4496768851421	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTCACTTCTTTGGCC	-20	True	NA	4	True	AATAAA	-23	NA	57710589	57648391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57710459
transcript_122082.known	chr20	-	4627	4	FSM	ENSG00000124225.16	ENST00000265626.8	4627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.8565446247542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTCACTTCTTTGG	8	False	NA	2	True	AATAAA	-21	NA	57711536	57648393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57711323
transcript_122083.known	chr20	+	2625	1	FSM	ENSG00000278709.2	ENST00000614771.2	2625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTATTTTTCTTTGC	-19	True	NA	33	True	GATAAA	-44	NA	57710155	57712780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57710200_57712800
transcript_122084.known	chr20	+	805	4	FSM	ENSG00000124237.6	ENST00000371168.4	805	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCTTTTCATTGCACCT	-16	True	NA	NA	False	TTTAAA	-23	NA	58150901	58161150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58151033_58153543_58153626_58155467_58155570_58160660
transcript_122085.known	chr20	-	1474	10	FSM	ENSG00000124224.18	ENST00000244070.7	1474	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	8.0691456246068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGTCGTGTGTTG	7	True	NA	NA	False	ATTAAA	-13	NA	58309439	58245745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_122088.nic	chr20	-	1245	9	ISM	ENSG00000124224.18	ENST00000244070.7	1474	10	-12	1310	0	0	5prime_fragment	FALSE	canonical	3	34	junction_5	5.97782360060917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTACTTTTTGA	-5	True	NA	-11	True	ATTAAA	-15	NA	58309451	58247055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_122090.known	chr20	+	8651	7	FSM	ENSG00000124209.4	ENST00000244040.4	8651	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	7.1278015934477	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTCCCAAATGGTT	-9	True	NA	10	True	AATAAA	-21	NA	58309714	58367507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58310013_58311042_58311123_58343717_58343800_58353272_58353345_58353431_58353539_58354155_58354266_58359605
transcript_122100.known	chr20	+	7829	6	FSM	ENSG00000124164.16	ENST00000475243.6	7829	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	16.0673582147159	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTTCAGTGTAAAATT	-8	True	NA	14	True	AATAAA	-25	NA	58389228	58451101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58389518_58418210_58418364_58434601_58434706_58438944_58439026_58440906_58441084_58444076
transcript_122102.nic	chr20	+	2275	5	NIC	ENSG00000124164.16	novel	7829	6	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	118.234935615494	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	10	False	NA	27	True	AATAAA	-17	NA	58389129	58445552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_58389518_58418210_58418364_58438944_58439026_58440906_58441084_58444076
transcript_122103.known	chr20	+	937	4	FSM	ENSG00000124164.16	ENST00000520497.1	937	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	135.258600055186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGGTAGGCCTTGGT	129	False	NA	NA	False	NA	NA	NA	58389365	58444531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58389518_58418210_58418364_58440906_58441084_58444076
transcript_122104.known	chr20	+	1834	3	FSM	ENSG00000124164.16	ENST00000395802.7	1834	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	127.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	76	False	NA	27	True	AATAAA	-17	NA	58389312	58445552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58389518_58418210_58418364_58444076
transcript_122111.known	chr20	-	3887	4	FSM	ENSG00000198768.11	ENST00000371149.8	3887	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	1.63299316185545	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTGCTGGTTATTAAA	-5	True	NA	-4	True	AATAAA	-19	NA	58515399	58459100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58461555_58467105_58467659_58470608_58470748_58514658
transcript_122138.known	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	79.7725071222033	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	-11	True	NA	22	True	ATTAAA	-22	NA	58692799	58715844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
transcript_122166.known	chr20	+	4897	9	FSM	ENSG00000124222.22	ENST00000355957.9	4897	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	107.905919670795	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	13	True	NA	42	True	ATTAAA	-32	NA	58651271	58679526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_122175.known	chr20	+	4937	9	FSM	ENSG00000124222.22	ENST00000371141.8	4937	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	110.883314231673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	24	True	NA	42	True	ATTAAA	-32	NA	58651282	58679526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_122188.known	chr20	+	942	8	FSM	ENSG00000124222.22	ENST00000467096.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	129.627881858426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGGTGTGAGGGGCTT	51	False	NA	NA	False	NA	NA	NA	58651865	58676328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_122221.known	chr20	-	594	1	FSM	ENSG00000268649.5	ENST00000596276.1	594	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTTTGCTCTTGTAT	NA	False	NA	-4	True	AATAAA	-18	NA	58817725	58817131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58817100_58817700
transcript_122232.nnic	chr20	+	1958	14	NNC	ENSG00000087460.29	novel	1854	13	NA	NA	-157	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2096.28424435621	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	73	False	NA	17	True	AATAAA	-19	NA	58891144	58911190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_58891551_58891720_58891866_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_12225.known	chr1	-	8369	20	FSM	ENSG00000197323.12	ENST00000358465.7	8369	20	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_12	27.2054866553628	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAATGAATTTCTTT	-7	True	NA	-31	True	ATTAAA	-17	NA	114511203	114392789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
transcript_122251.known	chr20	+	1089	13	FSM	ENSG00000087460.29	ENST00000306090.12	1089	13	0	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_1	1832.60952946884	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGAACCCCCAAATTTA	113	False	NA	-40	True	NA	NA	NA	58840843	58910829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58840887_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122254.known	chr20	+	1567	13	FSM	ENSG00000087460.29	ENST00000657090.1	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	34	False	NA	19	True	AATAAA	-21	NA	58839782	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58839941_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122259.known	chr20	+	1800	13	FSM	ENSG00000087460.29	ENST00000472183.6	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2047.0314414347	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	754	False	NA	19	True	AATAAA	-21	NA	58841484	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122262.known	chr20	+	1465	13	FSM	ENSG00000087460.29	ENST00000667293.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-7	True	NA	19	True	AATAAA	-21	NA	58888848	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58888905_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122264.known	chr20	+	1563	13	FSM	ENSG00000087460.29	ENST00000467321.6	1563	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2071.0262686783	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	37	False	NA	19	True	AATAAA	-21	NA	58888892	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889047_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122266.known	chr20	+	1663	13	FSM	ENSG00000087460.29	ENST00000477931.5	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	1989.94511893893	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	244	False	NA	19	True	AATAAA	-21	NA	58889099	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122268.known	chr20	+	1582	13	FSM	ENSG00000087460.29	ENST00000604005.6	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	2062.93642352352	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	7	False	NA	19	True	AATAAA	-21	NA	58889159	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889333_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_12227.known	chr1	-	3457	19	FSM	ENSG00000197323.12	ENST00000369543.6	3457	19	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	38.1997673058649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAAAAAAAAAAAAACA	36	False	NA	NA	False	AGTAAA	-40	NA	114511160	114397607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114397861_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
transcript_122270.known	chr20	+	1665	13	FSM	ENSG00000087460.29	ENST00000469431.6	1665	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-2	True	NA	19	True	AATAAA	-21	NA	58889150	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889407_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122274.known	chr20	+	2313	13	FSM	ENSG00000087460.29	ENST00000683015.1	2313	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2078.2574214284	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGATGGGACTCCCGT	703	False	NA	14	True	AATAAA	-16	NA	58889880	58911187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58890790_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122293.known	chr20	+	1638	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2061.1897639605	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	141	False	NA	19	True	AATAAA	-21	NA	58891980	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122295.known	chr20	+	1583	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2073.65405477599	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	165	False	NA	19	True	AATAAA	-21	NA	58892332	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122297.known	chr20	+	2503	12	FSM	ENSG00000087460.29	ENST00000419558.7	2503	12	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_2	2170.00462733254	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-1	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58840887_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_1223.known	chr1	+	2481	16	FSM	ENSG00000197785.14	ENST00000378756.8	2481	16	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_14	92.7102055990721	2429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	5	True	NA	30	True	AATAAA	-18	NA	1512161	1534685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1512474_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_122301.known	chr20	+	1622	12	FSM	ENSG00000087460.29	ENST00000482112.6	1622	12	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2369.36740520048	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-10	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58841876_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122305.known	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	2315.87701824522	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	-7	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_12231.known	chr1	-	1275	7	FSM	ENSG00000116752.6	ENST00000369541.4	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_3	71.8625230716416	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAGGCGGTTACTGT	0	True	NA	-13	True	AATAAA	-23	NA	114581615	114567556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
transcript_122311.known	chr20	+	1793	12	FSM	ENSG00000087460.29	ENST00000485673.6	1793	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2550.36763190157	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	3	True	NA	19	True	AATAAA	-21	NA	58889123	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889550_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122314.known	chr20	+	1537	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2382.6763027395	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	197	False	NA	19	True	AATAAA	-21	NA	58892036	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122320.known	chr20	-	1156	5	FSM	ENSG00000235590.8	ENST00000424094.6	1156	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	10.2591422643416	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-11	True	NA	-2	True	AATAAA	-33	NA	58850903	58818918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58819256_58841936_58842230_58842432_58842546_58848878_58848918_58850529
transcript_122322.known	chr20	+	1719	4	FSM	ENSG00000087460.29	ENST00000371098.6	1719	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1360.23878622673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	-1	True	NA	26	True	AATAAA	-23	NA	58839747	58900410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58840887_58895611_58895685_58898940_58898986_58899948
transcript_122330.known	chr20	+	4027	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_1	2059.00769486177	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-4	True	NA	19	True	AATAAA	-21	NA	58852715	58911192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122331.known	chr20	+	1533	13	FSM	ENSG00000087460.29	ENST00000468895.6	1533	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	2109.43752870285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGCAGCATTAAAAAAAAT	50	False	NA	-30	True	AATAAA	-37	NA	58891690	58911143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910684
transcript_122332.known	chr20	+	1548	12	FSM	ENSG00000087460.29	ENST00000478585.6	1548	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2482.81740457546	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	7	False	NA	6	True	AATAAA	-45	NA	58889159	58911179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122333.known	chr20	+	1554	14	FSM	ENSG00000087460.29	ENST00000480232.6	1554	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2780.60139721203	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	45	False	NA	6	True	AATAAA	-45	NA	58889222	58911179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58889525_58889550_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_122337.known	chr20	+	2137	16	FSM	ENSG00000101158.15	ENST00000460601.5	2137	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	110.163635863504	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	-1	True	NA	34	True	AGTAAA	-34	NA	58981274	58995133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641_58994825_58994925
transcript_12234.known	chr1	-	891	6	FSM	ENSG00000116752.6	ENST00000485021.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	277.031406161828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAATATTGTGTCATAG	13	False	114581642	47	True	CATAAA	-37	NA	114581629	114567883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114581298_114581392_114581498
transcript_122340.nic	chr20	+	2201	15	NIC	ENSG00000101158.15	novel	2237	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	76	junction_13	103.037564974714	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	NA	False	NA	14	True	AGTAAA	-14	NA	58981202	58995113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641
transcript_122342.known	chr20	+	2237	15	FSM	ENSG00000101158.15	ENST00000652272.2	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_13	55.1397112352073	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	-20	True	NA	14	True	AGTAAA	-14	NA	58981255	58995113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641
transcript_122379.known	chr20	+	1701	6	FSM	ENSG00000101158.15	ENST00000482747.1	1701	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_5	51.4874742048976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	-1	True	NA	NA	False	NA	NA	NA	58981274	58990400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989641_58989857
transcript_122381.known	chr20	-	1502	6	FSM	ENSG00000101160.15	ENST00000217131.6	1502	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.0976176963403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	1	True	NA	-22	True	AATAAA	-21	NA	59007254	58995184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
transcript_122383.nic	chr20	+	1963	5	ISM	ENSG00000101158.15	ENST00000482747.1	1701	6	-21	-24	2	24	intron_retention	FALSE	canonical	3	452	junction_4	10.6418983268964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTATCCAGCAGAG	-22	True	NA	NA	False	ATTAAA	-3	NA	58981253	58990424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913
transcript_122388.known	chr20	-	972	5	FSM	ENSG00000101160.15	ENST00000503833.7	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	1.6393596310755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAATGGTTCTGTTTAC	601	False	NA	-5	True	NA	NA	NA	59007239	58996578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
transcript_122389.known	chr20	-	3610	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	5224	junction_2	81.5	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTAGTTTTGCTTGTC	-6	True	NA	NA	False	AATAAA	-16	NA	59032335	59025474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59028842_59030302_59030430_59032219
transcript_122390.known	chr20	-	1878	2	FSM	ENSG00000124172.10	ENST00000395659.1	1878	2	0	0	0	0	multi-exon	FALSE	canonical	3	5224	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGTGAGACTTTT	-16	True	NA	-8	True	AATAAA	-29	NA	59032345	59028677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59030430_59032219
transcript_122391.known	chr20	-	704	6	FSM	ENSG00000101166.16	ENST00000463057.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	202.15182413226	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	774	False	NA	-16	True	AATACA	-18	NA	59042732	59034908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037300_59038465_59038635_59042698
transcript_122398.known	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	219.265107803316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	10	True	NA	NA	False	NA	NA	NA	59042805	59034633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
transcript_122402.known	chr20	+	5086	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	14.7271480229163	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	-40	True	NA	23	True	ATTAAA	-23	NA	59940388	59948680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
transcript_122405.known	chr20	+	880	4	FSM	ENSG00000196227.11	ENST00000469084.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	53.8908361618395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAAGGCAGAGAGCTGT	30	True	NA	NA	False	AAAACA	-26	NA	59940458	59945000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59944395
transcript_122409.known	chr20	-	578	2	FSM	ENSG00000277270.2	ENST00000615619.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGAAGCAGGTACTTGC	NA	False	NA	NA	False	NA	NA	NA	61437367	61434624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_61434876_61437040
transcript_122419.known	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	2034.93125737019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-18	True	NA	-10	True	TTTAAA	-23	NA	62143440	62136802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
transcript_122421.known	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4570	junction_4	619.713912489734	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	28	True	NA	-22	True	AATAAA	-16	NA	62143394	62136732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
transcript_12244.known	chr1	-	5701	18	FSM	ENSG00000175984.15	ENST00000393276.7	5701	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.87005185897627	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTGGAGAATTCTTTAA	354	False	NA	-10	True	AATAAA	-20	NA	114670111	114582847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114585632_114587386_114587474_114587715_114587953_114594472_114594579_114595831_114595874_114599273_114599452_114600203_114600353_114600819_114600961_114601507_114601586_114602124_114602195_114604921_114605032_114608685_114608874_114611072_114611118_114618385_114618483_114622986_114623100_114623506_114623644_114625178_114626189_114669982
transcript_122441.known	chr20	-	925	3	FSM	ENSG00000101182.15	ENST00000370858.3	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	4960	junction_1	29.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAACTGCTGATAAC	-8	True	NA	NA	False	NA	NA	NA	62143430	62139330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62139906_62140817_62140945_62143207
transcript_122445.nic	chr20	+	1724	12	NIC	ENSG00000184402.15	novel	4549	11	NA	NA	-217	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	6.1240617429452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGAGTAATTTTTACA	40	False	NA	3	True	AGTAAA	-15	NA	62143551	62180284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62143890_62158671_62158749_62159876_62159962_62161435_62161581_62162751_62162932_62163457_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181_62179357_62180168
transcript_122448.known	chr20	+	4549	11	FSM	ENSG00000184402.15	ENST00000331758.8	4549	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	4.3081318457076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGATTTTGGTGTGATGTG	5	True	NA	42	True	TATAAA	-21	NA	62143768	62182514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62143890_62158671_62158749_62159876_62159962_62161435_62161581_62162751_62162932_62163457_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181
transcript_122455.nic	chr20	+	3530	8	NIC	ENSG00000101181.18	novel	3747	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	13.7053542345274	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	NA	False	NA	18	True	CATAAA	-19	NA	62183004	62203568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682_62202844_62203083
transcript_122456.nnic	chr20	+	3315	7	NIC	ENSG00000101181.18	novel	3747	7	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	22.0957512255687	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	NA	False	NA	18	True	CATAAA	-19	NA	62183010	62203568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62183058_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682_62202844_62203083
transcript_122458.known	chr20	+	3747	7	FSM	ENSG00000101181.18	ENST00000370823.8	3747	7	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	14.6287388383278	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	-7	True	NA	18	True	CATAAA	-19	NA	62183027	62203568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_12246.known	chr1	-	4326	7	FSM	ENSG00000213281.5	ENST00000369535.5	4326	7	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_3	61.4882554278096	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATATTCACTGAAGTG	-20	True	NA	-11	True	AATAAA	-28	NA	114716771	114704468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
transcript_122466.nnic	chr20	+	2579	6	NIC	ENSG00000101181.18	novel	3747	7	NA	NA	-6	-164	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	24.1694021440333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGG	-13	True	NA	NA	False	AATACA	-7	NA	62183021	62202603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62183058_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_122467.nnic	chr20	+	2740	6	NIC	ENSG00000101181.18	novel	3747	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	24.1694021440333	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGGGGACAAAGAAGCA	-10	True	NA	NA	False	NA	NA	NA	62183024	62202767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62183058_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_122470.known	chr20	+	2814	6	FSM	ENSG00000101181.18	ENST00000467101.5	2814	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.772853935876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGGGGACAAAGAAGCA	9	True	NA	NA	False	NA	NA	NA	62183043	62202767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62198633_62198853_62199118_62199258_62200682
transcript_122483.known	chr20	+	3343	14	FSM	ENSG00000130703.17	ENST00000642932.1	3343	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	107.616566771975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAAAGTTATTTAACCA	-15	True	NA	3	True	NA	NA	NA	62238541	62294865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62280008_62280123_62281057_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_122485.known	chr20	+	3944	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	23.0255839186089	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	13	True	NA	7	True	AATAAA	-17	NA	62238520	62296183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_122488.known	chr20	+	3936	14	FSM	ENSG00000130703.17	ENST00000358053.3	3936	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	79.5466444235912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCGTTTGGGTGTGAG	13	True	NA	35	True	AATAAA	-45	NA	62238520	62296211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62260016_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_122492.known	chr20	+	2449	13	FSM	ENSG00000130703.17	ENST00000644775.1	2449	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.366305474095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAAAGTTATTTAACCA	-4	True	NA	3	True	NA	NA	NA	62238552	62294865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_122495.known	chr20	+	3886	13	FSM	ENSG00000130703.17	ENST00000439951.6	3886	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	84.4091803195732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTTTGGGTGTGAGTA	-23	True	NA	37	True	NA	NA	NA	62238484	62296213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62291702_62291794_62293784
transcript_122501.known	chr20	-	1674	12	FSM	ENSG00000130702.15	ENST00000370677.4	1674	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	28.7117334266609	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCATGGCACATGTATA	58	False	NA	NA	False	AAAAAG	-5	NA	62367270	62345413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62345586_62345817_62345878_62346080_62346216_62346505_62346597_62346681_62346801_62346912_62347029_62351703_62351802_62351908_62352080_62352241_62352361_62353133_62353252_62362399_62362553_62366948
transcript_122513.nnic	chr20	+	1452	10	NNC	ENSG00000130706.13	novel	1379	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_3	668.590741969191	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	16	False	NA	22	True	AATAAA	-22	NA	62302831	62308862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_62303050_62303567_62303782_62304460_62304486_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_122523.known	chr20	+	1379	10	FSM	ENSG00000130706.13	ENST00000253003.7	1379	10	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_6	220.954997931957	4410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	7	True	NA	22	True	AATAAA	-22	NA	62302996	62308862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_122549.nic	chr20	+	2164	9	NIC	ENSG00000130706.13	novel	1379	10	NA	NA	-48	0	intron_retention	FALSE	canonical	3	1558	junction_5	226.481097445239	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	32	False	NA	22	True	AATAAA	-22	NA	62302847	62308862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_12255.known	chr1	-	4312	21	FSM	ENSG00000009307.17	ENST00000610726.5	4274	21	-36	-2	-23	-1	multi-exon	FALSE	canonical	1	11	junction_19	1203.57951129122	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCGCTTTCATTATTG	570	False	NA	-1	True	AATAAA	-27	NA	114758050	114716913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
transcript_122560.known	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	657.446373763671	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	80	False	NA	20	True	AATAAA	-20	NA	62302895	62308860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_12258.known	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	1	513	junction_15	917.208860719752	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	1	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_12262.known	chr1	-	3774	20	FSM	ENSG00000009307.17	ENST00000369530.5	3774	20	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_18	1049.63018418189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTGTGCCTGAAA	617	False	NA	23	True	TTTAAA	-18	NA	114758003	114717311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
transcript_122659.known	chr20	-	668	1	FSM	ENSG00000273619.1	ENST00000610979.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGAAGTATGGTCGTTG	4	True	NA	-5	True	AGTAAA	-18	NA	62386970	62386302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62386300_62387000
transcript_122661.known	chr20	+	358	6	FSM	ENSG00000171858.18	ENST00000343986.9	358	6	0	0	0	0	multi-exon	FALSE	canonical	3	3796	junction_5	1260.63111178489	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	1	True	NA	14	True	AATAAA	-14	NA	62387102	62388520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308_62388365_62388456
transcript_122662.known	chr20	+	429	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	0	0	0	0	multi-exon	FALSE	canonical	3	5119	junction_1	806.252751933288	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	21	False	NA	13	True	AATAAA	-13	NA	62387122	62388519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
transcript_122668.known	chr20	+	418	4	FSM	ENSG00000171858.18	ENST00000450116.6	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	6240	junction_3	398.601165187571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	216	False	NA	13	True	AATAAA	-13	NA	62387317	62388519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62387389_62387610_62387675_62387842_62387915_62388308
transcript_122669.known	chr20	-	3785	10	FSM	ENSG00000149679.12	ENST00000279101.10	3783	10	0	-2	0	2	multi-exon	FALSE	canonical	3	91	junction_8	11.049831013735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCACAGCTTGTCTCCT	11	True	NA	-6	True	TTTAAA	-41	NA	62407285	62388631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62391112_62391248_62391454_62392388_62392496_62392919_62393024_62393439_62393606_62394156_62394266_62394936_62395015_62396314_62396408_62396520_62396593_62406914
transcript_122672.known	chr20	-	2799	14	FSM	ENSG00000130701.4	ENST00000252998.2	2799	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.2162606385263	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCTGGCAGGGCCCC	-1	True	NA	0	True	AATAAA	-17	NA	62427539	62410236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62410997_62412623_62412754_62412829_62412901_62413400_62413546_62413820_62414557_62415120_62415288_62415577_62415661_62415787_62415946_62416163_62416237_62416759_62416873_62417223_62417320_62418422_62418466_62419586_62419731_62427459
transcript_122674.known	chr20	+	548	2	FSM	ENSG00000233017.3	ENST00000622414.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGTGTCTGGCCTGTTT	NA	False	NA	NA	False	CATAAA	-24	NA	62430772	62431515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62431065_62431259
transcript_122675.known	chr20	-	2620	7	FSM	ENSG00000130700.7	ENST00000252997.3	2620	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.17997873466148	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTCTCCCTTCCCCCGC	-3	True	NA	NA	False	AATAAA	-14	NA	62475995	62463496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62464992_62465339_62465465_62465833_62465922_62466425_62466552_62473402_62473579_62474998_62475543_62475929
transcript_122685.known	chr20	+	2716	12	FSM	ENSG00000101187.16	ENST00000217159.6	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_11	13.1293627145135	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	1	True	NA	27	True	AATATA	-19	NA	62642502	62672293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62671749
transcript_122692.known	chr20	+	3092	10	FSM	ENSG00000101187.16	ENST00000497209.5	3092	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	14.1141728961782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	18	False	NA	27	True	AATATA	-19	NA	62642519	62672293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62668542_62668929_62669079_62671749
transcript_122696.nic	chr20	+	2685	5	ISM	ENSG00000101187.16	ENST00000217159.6	2716	12	-36	9737	-36	-7562	5prime_fragment	TRUE	canonical	3	95	junction_3	10.280442597476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGACTAATTCTCTGGG	-6	True	NA	NA	False	AATAAA	-27	NA	62642466	62662556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063
transcript_122705.nnic	chr20	+	2338	8	NNC	ENSG00000060491.17	novel	2410	7	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	44.4535988304613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	4608	False	NA	19	True	AATAAA	-16	NA	62804786	62814000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229_62813258_62813377
transcript_122706.nnic	chr20	+	2338	8	NNC	ENSG00000060491.17	novel	2410	7	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	44.4535988304613	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	4608	False	NA	19	True	AATAAA	-16	NA	62804786	62814000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229_62813279_62813398
transcript_122711.known	chr20	+	2410	7	FSM	ENSG00000060491.17	ENST00000290291.10	2410	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	8.56348838577675	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	15	True	NA	19	True	AATAAA	-16	NA	62804834	62814000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229
transcript_122714.known	chr20	+	2752	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	14.0445719051881	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	-6	True	NA	3	True	AATAAA	-16	NA	62796472	62801729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
transcript_12272.known	chr1	-	2667	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_18	1107.431189513	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTTAAGGTGGCGCC	3	True	NA	6	True	AATAAA	-45	NA	114757982	114717956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
transcript_122727.nic	chr20	+	2599	32	NIC	ENSG00000092758.18	novel	838	14	NA	NA	-187	-51	combination_of_known_junctions	TRUE	canonical	3	53	junction_1	45.6373981771851	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAATGACTGGCTACAGA	NA	False	NA	19	True	AATAAA	-20	NA	62816056	62841093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62816318_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_122728.nic	chr20	+	2549	32	NIC	ENSG00000092758.18	novel	838	14	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	45.6373981771851	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTAGTCTGATGTT	NA	False	NA	16	True	AATAAA	-32	NA	62816172	62841159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62816318_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_12274.known	chr1	-	4006	19	FSM	ENSG00000009307.17	ENST00000339438.10	4006	19	0	0	0	0	multi-exon	FALSE	canonical	1	998	junction_7	557.356348098263	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCGCTTTCATTATTGA	2	True	NA	0	True	AATAAA	-28	NA	114757983	114716912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_122742.known	chr20	+	2497	32	FSM	ENSG00000092758.18	ENST00000649368.1	2497	32	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	30.5875519626471	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTAGTCTGATGTT	4	True	NA	16	True	AATAAA	-32	NA	62817049	62841159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62817143_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_122743.known	chr20	-	8574	16	FSM	ENSG00000101191.17	ENST00000266070.8	8574	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	83.1687975678913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCGGGTCTTCATCAGC	-2	True	NA	-9	True	AATAAA	-18	NA	62937952	62877737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62882415_62890959_62891156_62891986_62892077_62892808_62892963_62893665_62894195_62894412_62894549_62894809_62894915_62895048_62895166_62896232_62896393_62896530_62896997_62905886_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_122769.known	chr20	-	2707	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	68.5145240076876	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	30	True	NA	-18	True	TATAAA	-17	NA	62926469	62905004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
transcript_122770.nnic	chr20	-	3036	6	NNC	ENSG00000101191.17	novel	2707	6	NA	NA	-501	0	intron_retention	FALSE	canonical	3	22	junction_5	98.1557945309394	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	NA	False	NA	-18	True	TATAAA	-17	NA	62927006	62905004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926639
transcript_122774.known	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	62.8700246540432	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-2	True	NA	-11	True	TATAAA	-24	NA	62937952	62904997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_122782.known	chr20	-	677	1	FSM	ENSG00000273759.1	ENST00000619319.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGCTAGTGGAGTTC	9516	False	NA	-1	True	AATAAA	-19	NA	62929297	62928620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62928600_62929300
transcript_122783.known	chr20	-	7551	15	FSM	ENSG00000101191.17	ENST00000395340.5	7551	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	90.2692118734007	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCCTTGTTTGTTTGAA	-4	True	NA	-4	True	AATAAA	-16	NA	62926503	62887213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62891156_62891986_62892077_62892808_62892963_62893665_62894195_62894412_62894549_62894809_62894915_62895048_62895166_62896232_62896393_62896530_62896997_62905886_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926438
transcript_122790.known	chr20	+	4369	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	22.4874965258474	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	12	True	NA	17	True	AGTAAA	-23	NA	62938146	62948475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
transcript_122798.known	chr20	+	2594	14	FSM	ENSG00000101194.18	ENST00000370349.7	2594	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	59.8169792443346	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	-3	True	NA	18	True	ATTAAA	-15	NA	62952706	62968597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62952890_62953210_62953273_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_122802.nic	chr20	+	2547	13	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	49.760816802871	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	7299	False	NA	18	True	ATTAAA	-15	NA	62952671	62968597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962735_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_122806.known	chr20	+	3518	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	38.9902943763644	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTTTTGTGTATCTGT	-1	True	NA	6	True	AATAAA	-16	NA	62952708	62969585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_122816.nnic	chr20	+	3031	12	NNC	ENSG00000101194.18	novel	2594	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	24	junction_2	49.5658840282722	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	-10	True	NA	18	True	ATTAAA	-15	NA	62952699	62968597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_62952890_62956764_62956937_62957440_62957581_62960503_62960604_62962623_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_122820.nic	chr20	+	3171	12	ISM	ENSG00000101194.18	ENST00000370351.9	3518	13	-37	988	-35	0	intron_retention	FALSE	canonical	3	65	junction_5	40.692558257262	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	7299	False	NA	18	True	ATTAAA	-15	NA	62952671	62968597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702
transcript_122821.nic	chr20	+	3141	12	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	-91	0	intron_retention	TRUE	canonical	3	95	junction_4	29.5198490443855	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	7243	False	NA	18	True	ATTAAA	-15	NA	62952615	62968597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_122831.nic	chr20	+	3688	11	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	-91	0	intron_retention	FALSE	canonical	3	95	junction_4	30.4919661550383	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	7243	False	NA	18	True	ATTAAA	-15	NA	62952615	62968597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62963370_62963583_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_122860.known	chr20	-	3198	5	FSM	ENSG00000149658.18	ENST00000370339.8	3198	5	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_4	14.3003496460751	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTCACCTCATTCTT	17	True	NA	-14	True	AATAAA	-18	NA	63216131	63195428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63196735_63202286_63203808_63213863_63213944_63215576_63215602_63215865
transcript_122861.known	chr20	+	1334	7	FSM	ENSG00000101197.13	ENST00000217169.8	1334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCAGCCTGTTCCAGAC	-19	True	NA	NA	False	AATAAA	-21	NA	63235904	63240495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63236446_63237902_63238003_63238395_63238478_63238568_63238615_63239161_63239234_63239357_63239611_63240255
transcript_122863.known	chr20	-	1353	7	FSM	ENSG00000101198.15	ENST00000370316.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	15.9965274009358	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-14	True	NA	-5	True	AATAAA	-18	NA	63254463	63240783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_122874.known	chr20	-	1421	6	FSM	ENSG00000101198.15	ENST00000370313.5	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	34.5485166107027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	1046	False	NA	-5	True	AATAAA	-18	NA	63253437	63240783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
transcript_122875.nic	chr20	-	839	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-28	36	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.873538606074	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAACCCCACATGCCCA	-8	True	NA	NA	False	AAAAAG	-24	NA	63254491	63241240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_122876.nic	chr20	-	3434	5	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-120	22	intron_retention	FALSE	canonical	3	74	junction_2	3.34477204006491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATACAAAAGAAAAGGCAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	63254583	63241254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_12288.known	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_17	878.392165178943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	11	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
transcript_122891.nic	chr20	+	3095	14	NIC	ENSG00000101199.13	novel	3467	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_13	89.740520094022	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTCTGGATGCATCC	NA	False	NA	29	True	AATAAA	-16	NA	63272784	63289788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563_63289497_63289677
transcript_122898.known	chr20	+	3250	13	FSM	ENSG00000101199.13	ENST00000370283.9	3250	13	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_9	53.057882438794	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCTGGATGCATCCCA	-2	True	NA	31	True	AATAAA	-18	NA	63272812	63289790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_122906.known	chr20	+	1327	13	FSM	ENSG00000101199.13	ENST00000547204.5	1327	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	164.50354606107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCTCCTTCCATTTGA	-18	True	NA	NA	False	NA	NA	NA	63272796	63287937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63272921_63275576_63275641_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63283850_63283881_63284865_63284923_63285653_63285714_63286371_63286443_63287563
transcript_12291.known	chr1	-	3459	18	FSM	ENSG00000009307.17	ENST00000530886.5	3459	18	0	0	0	0	multi-exon	FALSE	canonical	1	108	junction_16	880.542475922152	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGCCTGAAATGAATCT	593	False	NA	30	True	AATAAA	-4	NA	114758027	114717304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114749820_114750208_114757924
transcript_122915.known	chr20	+	1548	12	FSM	ENSG00000101199.13	ENST00000520485.5	1548	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	113.756808896206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCGGCCAGTTCACTAC	1	True	NA	NA	False	NA	NA	NA	63272815	63288192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_122940.known	chr20	-	2750	16	FSM	ENSG00000075043.20	ENST00000344462.8	2750	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	376.16252988421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTATTTTCCAACAGGG	9692	False	NA	NA	False	GGGGCT	-21	NA	63472509	63406465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63407376_63408412_63408537_63413449_63413582_63414087_63414191_63414902_63415091_63424176_63424207_63428366_63428436_63431339_63431370_63433808_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_122941.known	chr20	-	9213	16	FSM	ENSG00000075043.20	ENST00000626839.2	9213	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	374.976882250389	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTGTGTGGCCTCCTCA	-43	True	NA	-2	True	AGTAAA	-19	NA	63472677	63400209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63407376_63408412_63408537_63413449_63413582_63414087_63414194_63414902_63415127_63424176_63424207_63428366_63428436_63431339_63431370_63433808_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_122942.known	chr20	-	2775	15	FSM	ENSG00000075043.20	ENST00000360480.7	2775	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	373.579978050216	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCTGGGCAGGGC	9696	False	NA	NA	False	GGGGCT	-41	NA	63472505	63406445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63407376_63408412_63408537_63413449_63413582_63414087_63414194_63414902_63415127_63424176_63424207_63428366_63428436_63433808_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_122956.known	chr20	-	1441	8	FSM	ENSG00000075043.20	ENST00000344425.8	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_5	65.1804402863188	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGTGTGGTTTATTT	-21	True	NA	81	True	TTTAAA	-20	NA	63472655	63433677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_122964.nnic	chr20	-	1334	7	NIC	ENSG00000075043.20	novel	9213	16	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	41	junction_3	278.604508617901	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCTGTGTGTGGTTTA	-43	True	NA	78	True	TTTAAA	-17	NA	63472677	63433680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63433904_63438624_63438721_63439597_63439709_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_122974.known	chr20	+	827	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	1141	junction_1	65.335033991471	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGAGAAATGGCT	-5	True	NA	71	True	NA	NA	NA	63520764	63522206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
transcript_122975.known	chr20	+	478	3	FSM	ENSG00000125534.10	ENST00000473620.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	632.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCGCATCCCTCGCC	7	True	NA	NA	False	NA	NA	NA	63520776	63521949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63520895_63521511_63521590_63521667
transcript_122977.known	chr20	+	1090	2	FSM	ENSG00000125531.7	ENST00000370097.2	1090	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTAAAGGCAGCA	-4	True	NA	30	True	AATAAA	-43	NA	63554158	63556695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63554207_63555653
transcript_122978.known	chr20	+	2954	1	FSM	ENSG00000125531.7	ENST00000615526.1	2954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATGGAATTAAAGAAGC	683	False	NA	3	True	AATAAA	-16	NA	63553714	63556668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63553700_63556700
transcript_122980.known	chr20	-	7827	14	FSM	ENSG00000130589.16	ENST00000427522.6	7827	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.43909899491305	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGTGTTTGAGGTCT	6162	False	NA	-4	True	GATAAA	-23	NA	63568074	63558085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63559371_63559927_63560096_63560170_63560328_63560478_63560698_63560794_63560930_63561081_63561275_63561349_63561467_63561600_63561746_63561822_63561985_63562071_63562204_63562287_63562383_63562519_63566232_63566377_63566454_63566843
transcript_122982.known	chr20	-	1827	4	FSM	ENSG00000130589.16	ENST00000370082.1	1827	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3.09120616516523	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	63574239	63570138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63570612_63570684_63570869_63572107_63573222_63574183
transcript_122984.known	chr20	-	3079	3	FSM	ENSG00000130589.16	ENST00000479540.5	3079	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTAGCCAGGC	-3	True	NA	NA	False	NA	NA	NA	63574239	63570125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63570612_63570684_63573222_63574183
transcript_122985.nic	chr20	-	3201	2	NIC	ENSG00000130589.16	novel	3079	3	NA	NA	-39	10	intron_retention	FALSE	canonical	3	9	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	63574278	63570115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63573222_63574183
transcript_122986.known	chr20	-	4280	10	FSM	ENSG00000101216.11	ENST00000370077.2	4280	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	9.54521404218424	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGTGTCTATCTCTTG	-21	True	NA	-11	True	AATAAA	-14	NA	63627101	63587604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63590730_63592021_63592145_63592532_63592671_63593010_63593083_63595609_63595768_63597756_63597861_63602964_63603093_63604742_63604841_63619266_63619455_63626955
transcript_122989.known	chr20	+	582	2	FSM	ENSG00000232442.2	ENST00000411579.2	614	2	29	3	-1	0	multi-exon	TRUE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTGCTACTATTTTAT	14	True	NA	11	True	AATAAA	-18	NA	63627249	63628707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63627393_63628268
transcript_122990.known	chr20	+	801	2	FSM	ENSG00000232442.2	ENST00000449500.2	826	2	25	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGTGCTGAGGGGGGC	-9	True	NA	NA	False	AATAAA	-16	NA	63627226	63628824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63627393_63628189
transcript_122999.known	chr20	-	2248	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.851835180516	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-2	True	NA	-8	True	AATAAA	-18	NA	63653424	63639711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_123.known	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_4	3693.94232068018	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_123007.nnic	chr20	-	2130	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9742	0	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	45.5	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-2	True	NA	-8	True	AATAAA	-18	NA	63642652	63639711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_63641398_63642107_63642300_63642400
transcript_123008.nnic	chr20	-	2038	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9646	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	114.5	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	63642748	63639711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_63641398_63642107_63642300_63642588
transcript_123023.known	chr20	+	4955	35	FSM	ENSG00000258366.11	ENST00000370018.7	4955	35	0	0	0	0	multi-exon	TRUE	canonical	1	60	junction_32	26.6808641559963	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGTGGCCTGGGCTTGG	142	False	NA	26	True	AATAAA	-26	NA	63657809	63696253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695481_63695777
transcript_123024.known	chr20	+	4615	35	FSM	ENSG00000258366.11	ENST00000360203.11	4615	35	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_32	23.8010969186899	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTGTCTTCGTGGCCT	-9	True	NA	18	True	AATAAA	-18	NA	63658311	63696245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
transcript_123101.known	chr20	-	1623	8	FSM	ENSG00000101246.20	ENST00000618838.4	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	72.4943347540245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	155	False	NA	-2	True	NA	NA	NA	63707838	63699455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707809
transcript_123103.known	chr20	-	2518	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	73.7889986822603	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCTTCTATTTAAA	17	True	NA	NA	False	TATAAA	-17	NA	63707976	63698646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_123113.known	chr20	+	1881	7	FSM	ENSG00000197114.12	ENST00000448100.6	1881	7	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_1	82.0020324951359	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	82	False	NA	13	True	ATTAAA	-20	NA	63707464	63736141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63707560_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_123125.nic	chr20	+	1850	7	NIC	ENSG00000197114.12	novel	1867	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	78.6180994145467	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	645	False	NA	13	True	ATTAAA	-20	NA	63708027	63736141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_123126.nic	chr20	+	1926	7	NIC	ENSG00000197114.12	novel	1945	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	79.2333052867711	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	-14	True	NA	13	True	ATTAAA	-20	NA	63708038	63736141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_123128.known	chr20	+	1867	7	FSM	ENSG00000197114.12	ENST00000355969.11	1867	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	46.8460836736173	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	-14	True	NA	14	True	ATTAAA	-21	NA	63708038	63736142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_123142.known	chr20	+	1896	7	FSM	ENSG00000197114.12	ENST00000357119.8	1896	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	81.8284112572698	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	0	True	NA	14	True	ATTAAA	-21	NA	63708052	63736142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_123143.known	chr20	+	1945	7	FSM	ENSG00000197114.12	ENST00000328969.5	1945	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	82.4055014344714	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	37	False	NA	13	True	ATTAAA	-20	NA	63708089	63736141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_123145.known	chr20	+	1890	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	53.5456710564812	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	33	False	NA	14	True	ATTAAA	-21	NA	63708085	63736142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_123155.nic	chr20	+	1706	7	ISM	ENSG00000125520.14	ENST00000266077.5	2361	8	448	545	-19	0	3prime_fragment	FALSE	canonical	3	211	junction_1	31.2432214870504	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	361	False	NA	21	True	ATTAAA	-21	NA	63740223	63743505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_63740532_63741369_63741480_63741868_63742057_63742129_63742231_63742335_63742616_63742698_63742791_63742878
transcript_123158.known	chr20	-	1698	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	79.6145226841323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-17	True	NA	-8	True	NA	NA	NA	63707916	63699477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_123160.known	chr20	-	1612	7	FSM	ENSG00000101246.20	ENST00000618568.4	1612	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	97.9892284329706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-3	True	NA	-27	True	AATAAA	-28	NA	63707996	63699496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700531_63700601_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_123176.known	chr20	+	2831	6	FSM	ENSG00000197114.12	ENST00000477340.5	2831	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	48.8114740609214	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	-14	True	NA	13	True	ATTAAA	-20	NA	63708038	63736141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63734825_63735158_63735565_63735780
transcript_12318.known	chr1	-	5506	5	FSM	ENSG00000052723.12	ENST00000369528.9	5506	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	103.398500956252	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-22	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780436
transcript_123187.nic	chr20	+	1811	6	NIC	ENSG00000125520.14	novel	2361	8	NA	NA	-19	0	intron_retention	FALSE	canonical	3	211	junction_1	33.4448800266947	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	361	False	NA	21	True	ATTAAA	-21	NA	63740223	63743505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63740532_63741369_63741480_63741868_63742057_63742129_63742616_63742698_63742791_63742878
transcript_123203.known	chr20	+	1328	5	FSM	ENSG00000125520.14	ENST00000493772.5	1328	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	117.72080317429	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	145	False	NA	21	True	ATTAAA	-21	NA	63741251	63743505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63741480_63742129_63742231_63742335_63742616_63742698_63742791_63742878
transcript_123205.known	chr20	-	5231	5	FSM	ENSG00000130584.12	ENST00000245663.9	5231	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	8.45576726264388	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGCCTCCTGCGTCTC	-19	True	NA	-9	True	AATAAA	-20	NA	63831264	63743669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63747302_63752685_63752862_63775677_63775963_63789820_63790791_63831096
transcript_12321.known	chr1	-	349	4	FSM	ENSG00000052723.12	ENST00000510745.5	349	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	119.021006549264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATCAGCAGTGAGTCT	151	False	NA	NA	False	NA	NA	NA	114780512	114774344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780448
transcript_123216.known	chr20	+	2273	11	FSM	ENSG00000258366.11	ENST00000370003.2	2273	11	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_8	36.3016528549321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCTTCGTGGCCTGGG	NA	False	NA	21	True	AATAAA	-21	NA	63689965	63696248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
transcript_123217.known	chr20	+	1140	3	FSM	ENSG00000243509.6	ENST00000369996.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTAGTTGCACAGCT	0	True	NA	57	True	TATAAA	-15	NA	63696651	63698684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63697192_63697327_63697523_63698279
transcript_123219.known	chr20	-	3082	1	FSM	ENSG00000268858.2	ENST00000601296.2	3082	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTAGGCTGGTCTTG	3	True	NA	-7	True	ATTAAA	-20	NA	63864293	63861211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63861200_63864300
transcript_123220.known	chr20	+	2339	8	FSM	ENSG00000101150.18	ENST00000352482.8	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	273.927221080672	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	12	True	NA	37	True	AATAAA	-26	NA	63865289	63891545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_123221.known	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_4	155.676659208188	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	-8	True	NA	30	True	AATAAA	-19	NA	63865269	63891538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
transcript_123224.known	chr20	+	2275	7	FSM	ENSG00000101150.18	ENST00000358548.4	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	294.350697864526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	16	True	NA	37	True	AATAAA	-26	NA	63865293	63891545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_123228.known	chr20	+	2237	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	128.799689440619	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	12	True	NA	37	True	AATAAA	-26	NA	63865289	63891545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
transcript_12323.known	chr1	-	470	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	29	True	NA	-13	True	AATAAA	-17	NA	114780634	114779106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114779285_114780109_114780216_114780448
transcript_123231.known	chr20	+	2197	5	FSM	ENSG00000101150.18	ENST00000611972.4	2197	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	296.838339841739	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	NA	False	NA	37	True	AATAAA	-26	NA	63865227	63891545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63889189_63889239_63889849
transcript_123234.known	chr20	+	5287	6	FSM	ENSG00000101152.11	ENST00000470551.1	5287	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	29.178073959739	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTCTTACTCGCTAGT	31	True	NA	36	True	AATAAA	-41	NA	63895181	63936031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931108_63931183_63931464
transcript_123235.known	chr20	+	5249	5	FSM	ENSG00000101152.11	ENST00000360864.9	5249	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	24.4374200765956	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCACTGCGGACCCCA	-25	True	NA	16	True	AATAAA	-21	NA	63895125	63936011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931464
transcript_12324.known	chr1	-	415	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-22	True	NA	-13	True	AATAAA	-17	NA	114780685	114779106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114779285_114780448
transcript_123242.known	chr20	-	5982	17	FSM	ENSG00000196700.9	ENST00000369888.6	5982	17	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_16	11.3660679216693	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTGTGCGGCTCAGT	-16	True	NA	-3	True	AATAAA	-21	NA	63969930	63956703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63960140_63961308_63961408_63961941_63962005_63962272_63962375_63962586_63962782_63963094_63963266_63963341_63963441_63963617_63963711_63963788_63963914_63964070_63964218_63964319_63964392_63964489_63964717_63966140_63966782_63966875_63967005_63967380_63967524_63967829_63967953_63969813
transcript_12325.known	chr1	-	3216	8	FSM	ENSG00000134198.10	ENST00000369516.7	3216	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	10.259888211986	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTGATTTATCTT	-13	True	NA	3	True	ATTAAA	-18	NA	115089503	115048010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_123250.nnic	chr20	-	1846	15	NIC	ENSG00000198276.16	novel	1838	15	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	210.459022139703	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-15	True	NA	NA	False	AATAAA	-21	NA	63956418	63939828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63942469_63942493_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_123256.known	chr20	-	1838	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	192.812177297716	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-13	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_123261.nnic	chr20	-	1812	15	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_6	201.443173229614	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-13	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_123265.nic	chr20	-	2014	14	NIC	ENSG00000198276.16	novel	1838	15	NA	NA	9	0	intron_retention	FALSE	canonical	3	99	junction_8	194.478182101771	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-4	True	NA	NA	False	AATAAA	-21	NA	63956407	63939828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63946268_63946452_63946644_63956259
transcript_12328.known	chr1	-	671	7	FSM	ENSG00000134198.10	ENST00000433172.3	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	31.2552217859494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCAATTGTACATT	9970	False	NA	-15	True	NA	NA	NA	115089414	115050382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_115050556_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_123281.known	chr20	-	1845	13	FSM	ENSG00000198276.16	ENST00000358711.7	1845	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	205.939918422825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAAGGTGTGATT	18	True	NA	NA	False	AATAAA	-10	NA	63956385	63939839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_12329.known	chr1	-	1061	3	FSM	ENSG00000134259.6	ENST00000369512.3	1061	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-6	True	NA	NA	False	ATTAAA	-13	NA	115338249	115285916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_115286808_115293626_115293751_115338203
transcript_123297.known	chr20	-	2178	5	FSM	ENSG00000130590.14	ENST00000369886.8	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	10.9201648339208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCGGTGCTGGGTCTGC	0	True	NA	-6	True	AATAAA	-15	NA	63979642	63974115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63975533_63975691_63975833_63976970_63977143_63977224_63977407_63979376
transcript_123298.known	chr20	-	823	5	FSM	ENSG00000130590.14	ENST00000498830.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.4333243340507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCGCCTCTGGTTG	-5	True	NA	NA	False	NA	NA	NA	63980008	63975359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63975533_63975691_63975833_63976970_63977143_63977224_63977407_63979853
transcript_12330.known	chr1	+	8671	8	FSM	ENSG00000173218.15	ENST00000355485.7	8671	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	10.0488602257537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTCTTTTCT	-9	True	NA	14	True	AATAAA	-14	NA	115641969	115698221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_115642087_115651276_115651485_115659640_115659774_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
transcript_123312.known	chr20	+	3047	21	FSM	ENSG00000101161.8	ENST00000266079.5	3047	21	0	0	0	0	multi-exon	TRUE	canonical	3	543	junction_11	100.615344257226	964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTGCTGGTTTTC	-9	True	NA	23	True	ATTAAA	-24	NA	63981131	64033100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
transcript_123342.known	chr20	+	954	4	FSM	ENSG00000196421.9	ENST00000636176.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCGCCTGCCTCTCT	-1	True	NA	12	True	AATAAA	-26	NA	64036181	64039001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64036327_64037926_64038203_64038295_64038449_64038621
transcript_123346.nic	chr20	+	1266	11	NIC	ENSG00000171703.17	novel	1182	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_1	193.016294648923	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	1	True	NA	26	True	ATTAAA	-16	NA	64063171	64072347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_64063385_64063891_64063950_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_12335.known	chr1	+	2265	8	FSM	ENSG00000173218.15	ENST00000310260.7	2265	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	59.8685635200911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGCAGTTCAGGAGATA	603	False	NA	-79	True	NA	NA	NA	115642628	115691854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_115642707_115651276_115651485_115659640_115659774_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
transcript_123352.known	chr20	+	1182	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	0	0	0	0	multi-exon	FALSE	canonical	2	277	junction_6	77.7109236486158	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	27	True	NA	26	True	ATTAAA	-16	NA	64063197	64072347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_123354.nic	chr20	+	1866	10	NIC	ENSG00000171703.17	novel	1182	10	NA	NA	-79	0	intron_retention	FALSE	canonical	2	35	junction_1	158.825162045456	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	288	False	NA	26	True	ATTAAA	-16	NA	64063078	64072347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_64063950_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_123363.nic	chr20	+	1743	9	NIC	ENSG00000171703.17	novel	1182	10	NA	NA	-83	0	intron_retention	FALSE	canonical	3	457	junction_5	36.4717356318561	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	284	False	NA	26	True	ATTAAA	-16	NA	64063074	64072347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64070415_64070488_64070636_64071869_64071942_64072171
transcript_123375.known	chr20	+	1733	8	FSM	ENSG00000171703.17	ENST00000395053.7	1733	8	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_5	38.7472184650139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTCCTCAGCCGT	-13	True	NA	25	True	ATTAAA	-15	NA	64063157	64072346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64070636_64071869_64071942_64072171
transcript_123376.nic	chr20	+	2016	8	NIC	ENSG00000171703.17	novel	1182	10	NA	NA	-83	0	intron_retention	FALSE	canonical	3	458	junction_1	35.1515668649525	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	284	False	NA	26	True	ATTAAA	-16	NA	64063074	64072347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64070415_64070488_64070636_64071869_64071942_64072171
transcript_123392.known	chr20	+	421	2	FSM	ENSG00000171703.17	ENST00000476113.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTTAGCCCGCAGC	25	True	NA	23	True	AATAAA	-17	NA	64063195	64064123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64063385_64063891
transcript_123397.known	chr20	-	1619	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	29.654004788561	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-16	True	NA	-6	True	TTTAAA	-6	NA	64079518	64073180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
transcript_123399.known	chr20	-	1510	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	35.4423475520457	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	4960	False	NA	-6	True	TTTAAA	-6	NA	64079988	64073180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
transcript_123403.nic	chr20	-	1897	5	NIC	ENSG00000171700.14	novel	1619	6	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	45.996603135449	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	5054	False	NA	-6	True	TTTAAA	-6	NA	64079894	64073180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079293
transcript_123404.nnic	chr20	-	1413	5	NIC	ENSG00000171700.14	novel	1510	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	46.4219775537406	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	4959	False	NA	-6	True	TTTAAA	-6	NA	64079989	64073180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079872
transcript_123408.known	chr20	+	3147	4	FSM	ENSG00000125510.18	ENST00000355631.8	3147	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTCTGGCTCCTGC	55	False	NA	23	True	AATAAA	-32	NA	64080195	64100643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64080353_64092687_64092954_64097801_64098158_64098275
transcript_123409.known	chr20	-	823	3	FSM	ENSG00000171695.11	ENST00000302096.5	823	3	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGCTGGTCTTTTTGCT	7382	False	NA	NA	False	CATAAA	-17	NA	64084398	64083375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64083495_64083582_64083706_64083817
transcript_12341.known	chr1	+	4705	12	FSM	ENSG00000163393.13	ENST00000369503.9	4705	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.98758789976189	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTTTTTTGTTCTCCC	-25	True	NA	NA	False	AATAAA	-16	NA	115976512	116070054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_115976715_115992030_115992244_116019581_116019715_116020720_116020886_116026892_116027023_116031365_116031582_116035186_116035328_116037302_116037389_116062761_116062883_116064435_116064509_116066519_116066709_116067018
transcript_123410.known	chr20	-	868	2	FSM	ENSG00000171695.11	ENST00000308906.6	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAAGGCTCGCTGGTCTTTT	7421	False	NA	NA	False	CATAAA	-13	NA	64084359	64083379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64083706_64083817
transcript_123416.known	chr20	+	3859	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_4	47.4442831118777	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	-9	True	NA	17	True	AATAAA	-18	NA	64255747	64276226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
transcript_123422.known	chr20	+	3212	6	FSM	ENSG00000203880.12	ENST00000369758.8	3212	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	202.734308887272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGCGCACCTTATAC	-16	True	NA	15	True	AATAAA	-15	NA	64255740	64275653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267967_64268011_64273220
transcript_123433.known	chr21	+	3237	7	FSM	ENSG00000277117.5	ENST00000623960.4	3237	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.6785562825394	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCCTGTATCCAGTGGC	4	True	NA	NA	False	NA	NA	NA	5022530	5036771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_5022694_5025008_5025050_5026279_5026631_5027934_5028226_5032052_5032218_5033407_5033444_5034581
transcript_123436.known	chr21	-	3188	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_20	53.2971622133862	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	4	True	NA	37	True	ATTAAA	-16	NA	5154658	5130870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_123445.nic	chr21	-	2109	16	ISM	ENSG00000275464.5	ENST00000617716.4	3188	21	-104	5151	-104	966	5prime_fragment	FALSE	canonical	3	144	junction_15	57.8693547762736	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGAGTTTGGCAACCTG	NA	False	NA	NA	False	AAGAAA	-3	NA	5154762	5136021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_123448.nic	chr21	-	2088	15	ISM	ENSG00000275464.5	ENST00000617716.4	3188	21	-104	6455	-104	-338	5prime_fragment	FALSE	canonical	3	144	junction_14	59.662870893591	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGCCAGCGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	5154762	5137325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_123463.known	chr21	-	1584	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_1	202.962845532542	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	-7	True	NA	NA	False	AATAAA	-17	NA	5128369	5116340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_123476.known	chr21	-	898	6	FSM	ENSG00000280071.4	ENST00000624120.3	898	6	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_2	327.24828494585	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGATGTTTCTTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	5128372	5116936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5117232_5118690_5118848_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_123479.nic	chr21	-	3132	6	NIC	ENSG00000280071.4	novel	1584	7	NA	NA	-49	-4	intron_retention	FALSE	canonical	3	609	junction_1	93.7707843627214	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTGTGCTGCATTCA	NA	False	NA	NA	False	AATAAA	-13	NA	5128462	5116344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_123483.known	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	302.222699346029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	89	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_123487.known	chr21	-	807	5	FSM	ENSG00000280071.4	ENST00000624714.3	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	84.5857553019419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	NA	False	NA	NA	False	NA	NA	NA	5128378	5121448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_123499.known	chr21	+	549	3	FSM	ENSG00000274333.4	ENST00000619252.4	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	70.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGGGCTCCCTAACA	NA	False	NA	NA	False	NA	NA	NA	5553636	5590200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_5553839_5585822_5585988_5590018
transcript_123501.known	chr21	+	835	2	FSM	ENSG00000274333.4	ENST00000623436.3	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATAGAGCCGGGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	5553668	5590683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_5553839_5590018
transcript_123503.known	chr21	+	4747	14	FSM	ENSG00000275993.3	ENST00000613488.3	4747	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	3.51833742339362	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGAGCTCTTTCCTT	-14	True	NA	NA	False	NA	NA	NA	6111130	6123778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_6111253_6112069_6112240_6112738_6112856_6116223_6116288_6116461_6116624_6116893_6117019_6117127_6117252_6117803_6118028_6118255_6118403_6118782_6118909_6119023_6119241_6119719_6120002_6120486_6120719_6121143
transcript_123504.known	chr21	-	2380	4	FSM	ENSG00000275496.4	ENST00000621924.4	2380	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	81.4138945280363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	6267304	6228965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6230952_6234982_6235148_6254790_6254850_6267134
transcript_123505.known	chr21	-	859	3	FSM	ENSG00000275496.4	ENST00000617746.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	71	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	6	False	NA	NA	False	NA	NA	NA	6267275	6230398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6230952_6234982_6235148_6267134
transcript_123508.known	chr21	-	465	2	FSM	ENSG00000275496.4	ENST00000624446.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCATCTCAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	6267313	6230665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6230952_6267134
transcript_123511.known	chr21	+	665	4	FSM	ENSG00000278903.4	ENST00000623738.3	665	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	25.2234458831902	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAAATGATTTCTCCAA	-16	True	NA	NA	False	NA	NA	NA	6318439	6356986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_6318605_6320871_6320975_6322599_6322698_6356687
transcript_12354.known	chr1	+	3670	23	FSM	ENSG00000163399.16	ENST00000295598.10	3670	23	0	0	0	0	multi-exon	FALSE	canonical	3	2123	junction_6	227.721670226856	3368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTGCCCTCGTCGC	2	True	NA	15	True	AATAAA	-20	NA	116373243	116404774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116373524_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
transcript_123562.nic	chr21	-	2441	18	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	-139	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	476.252709807111	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6467673	6444868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_123563.known	chr21	-	2353	18	FSM	ENSG00000274276.5	ENST00000618024.4	2353	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_17	712.200668623347	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6468040	6444868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467902
transcript_123577.known	chr21	-	1992	18	FSM	ENSG00000274276.5	ENST00000624934.3	1992	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	778.426204852704	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGAGCATCCGTCTCC	NA	False	NA	NA	False	NA	NA	NA	6467532	6445432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6445662_6447735_6447778_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_1236.known	chr1	+	2330	16	FSM	ENSG00000197785.14	ENST00000536055.6	2330	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	161.937436478825	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	373	False	NA	30	True	AATAAA	-18	NA	1512529	1534685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1512691_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_123631.known	chr21	-	2453	17	FSM	ENSG00000274276.5	ENST00000624406.3	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_16	618.140811223462	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	1	True	NA	NA	False	TATAAA	-14	NA	6467509	6444868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6464982_6467447
transcript_123636.known	chr21	-	2514	17	FSM	ENSG00000274276.5	ENST00000398168.6	2495	17	-19	0	0	0	multi-exon	FALSE	canonical	3	1666	junction_10	306.224794881146	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6467532	6444868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_123637.known	chr21	-	2563	17	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	44	junction_16	645.087999689771	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTGTGGCCTCGTGTCT	NA	False	NA	NA	False	TATAAA	-10	NA	6468040	6444872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467902
transcript_12365.known	chr1	+	3763	23	FSM	ENSG00000163399.16	ENST00000537345.5	3763	23	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	565.313085199273	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCTGTGCCCTCGTC	55	False	NA	13	True	AATAAA	-18	NA	116373866	116404772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116374242_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
transcript_123730.known	chr21	-	963	9	FSM	ENSG00000275895.7	ENST00000620065.4	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_6	2055.52005280902	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTTGGTGTAACTTAT	42	False	NA	NA	False	AATAAA	-17	NA	6499202	6484625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6493043_6493111_6495992_6496081_6499128
transcript_123737.known	chr21	-	945	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_6	885.778177419063	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-4	True	NA	NA	False	AATAAA	-20	NA	6499248	6484622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
transcript_123739.known	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2268	junction_5	1688.83558484924	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	42	False	NA	NA	False	NA	NA	NA	6499202	6484708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
transcript_123742.known	chr21	+	2247	4	FSM	ENSG00000277067.4	ENST00000623095.3	2247	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	91.2152521359352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7048890	7087097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7049061_7061346_7061406_7081048_7081214_7085244
transcript_123743.known	chr21	+	859	3	FSM	ENSG00000277067.4	ENST00000621909.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	80	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	7	False	NA	NA	False	NA	NA	NA	7048919	7085797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7049061_7081048_7081214_7085244
transcript_123748.known	chr21	+	2247	4	FSM	ENSG00000276077.4	ENST00000625096.3	2247	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	90.4814284198083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7430668	7468875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7430839_7443124_7443184_7462826_7462992_7467022
transcript_123750.known	chr21	+	994	3	FSM	ENSG00000276077.4	ENST00000624461.3	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	76	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCAGGAAAAAGCGTCT	9	False	NA	NA	False	NA	NA	NA	7430729	7467742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7430839_7462826_7462992_7467022
transcript_123755.known	chr21	+	1193	5	FSM	ENSG00000273590.5	ENST00000622934.3	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	99.6857562543416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATCTTGTTTTACAG	NA	False	NA	NA	False	AATAAA	-22	NA	7744970	7772246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7769186_7769376_7771566
transcript_123756.known	chr21	+	843	4	FSM	ENSG00000273590.5	ENST00000619874.5	870	4	24	3	4	-2	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7744974	7758627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7758104
transcript_123758.known	chr21	+	1021	4	FSM	ENSG00000273590.5	ENST00000612624.4	1021	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	87.5226954693594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	1	True	NA	NA	False	AATAAA	-29	NA	7744982	7772253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7745039_7748898_7748988_7769186_7769376_7771566
transcript_123759.known	chr21	+	1074	4	FSM	ENSG00000273590.5	ENST00000624758.3	1074	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	96.1330097081931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	93	False	NA	NA	False	AATAAA	-20	NA	7745074	7758629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7745368_7748898_7748988_7754951_7755119_7758104
transcript_123763.known	chr21	+	2520	7	FSM	ENSG00000280441.3	ENST00000623860.3	2520	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	43.3797827974686	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTAAGTGTGTGTTCCC	NA	False	NA	NA	False	AATAAA	-18	NA	8380642	8410645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_8380973_8383783_8384099_8405959_8406057_8406183_8407185_8407345_8407438_8409172_8409391_8410178
transcript_123768.known	chr21	+	153	1	FSM	ENSG00000275215.1	ENST00000613359.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	4	False	NA	NA	False	GGGGCT	-19	NA	8395606	8395759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_8395600_8395800
transcript_123770.known	chr21	+	812	3	FSM	ENSG00000224905.8	ENST00000448463.3	816	3	4	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_2	40.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCTAAAATGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	14027418	14089046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14027598_14083949_14084145_14088608
transcript_123774.known	chr21	+	1332	3	FSM	ENSG00000224905.8	ENST00000428809.5	1332	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	28	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	NA	False	NA	11	True	AATAAA	-27	NA	14027420	14144468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14027598_14083949_14084145_14143508
transcript_123775.known	chr21	+	1084	3	FSM	ENSG00000224905.8	ENST00000432621.5	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	36	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	NA	False	NA	11	True	AATAAA	-27	NA	14027420	14144468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14027598_14083949_14084145_14143756
transcript_123777.known	chr21	+	553	3	FSM	ENSG00000224905.8	ENST00000653756.2	578	3	25	0	19	0	multi-exon	FALSE	canonical	1	1	junction_2	42.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTCTTCATTGA	1	True	NA	NA	False	AAAAAG	-20	NA	14027439	14088783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14027598_14083949_14084145_14088583
transcript_123778.known	chr21	+	1955	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.54835134966506	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	-2	True	NA	NA	False	AATAAA	-18	NA	14216156	14228372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
transcript_123779.known	chr21	-	3945	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_1	14.2214626533279	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTACTTTTTCATTCAG	-5	True	NA	-3	True	AATAAA	-27	NA	14383146	14371114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
transcript_123782.known	chr21	+	1445	8	FSM	ENSG00000154639.19	ENST00000400169.1	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	392.467807077009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAATACATTGA	9	False	NA	-23	True	TTTAAA	-29	NA	17513129	17593579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427_17565612_17593151
transcript_123786.known	chr21	+	5593	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_6	125.653513900549	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	16	True	NA	2	True	AATAAA	-15	NA	17513042	17570100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
transcript_123787.nic	chr21	+	939	6	ISM	ENSG00000154639.19	ENST00000284878.12	5593	7	-64	8669	-64	-4056	5prime_fragment	FALSE	canonical	3	1175	junction_5	57.6208295670932	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCGCAGAGAAGAAAAATATG	3	True	NA	NA	False	NA	NA	NA	17512978	17561431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337
transcript_123790.known	chr21	+	1080	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_4	488.800061374792	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	19	True	NA	NA	False	AATATA	-24	NA	17513045	17565852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
transcript_123794.known	chr21	-	1485	6	FSM	ENSG00000154640.15	ENST00000339775.10	1485	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	92.9933330943676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	30	True	NA	-1	True	AATAAA	-19	NA	17612844	17593652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17594333_17598616_17598825_17604144_17604277_17604859_17604998_17608971_17609153_17612698
transcript_123796.known	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	33.3841279652472	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	16	False	17612917	-1	True	AATAAA	-19	NA	17612901	17593652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
transcript_123797.known	chr21	-	531	2	FSM	ENSG00000154640.15	ENST00000464058.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGGAGGCCAATGCTA	23	True	NA	NA	False	TTTAAA	-41	NA	17612851	17608774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17609153_17612698
transcript_123799.known	chr21	+	2341	1	FSM	ENSG00000280594.2	ENST00000630155.1	2341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTCTTCTAGGACTT	19	False	NA	NA	False	AATAAA	-22	NA	17611772	17614113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17611800_17614100
transcript_123800.known	chr21	-	5396	5	FSM	ENSG00000154642.11	ENST00000284881.9	5396	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	11.0989864402116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCTTGAGTGGATG	-2	True	NA	-25	True	AATAAA	-16	NA	17819356	17788973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17793582_17795207_17795271_17796581_17797119_17818191_17818326_17819302
transcript_123807.nic	chr21	-	2095	4	ISM	ENSG00000154642.11	ENST00000284881.9	5396	5	0	4278	0	-5	intron_retention	FALSE	canonical	3	132	junction_1	12.328828005938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTCTTCTAGGGCTAA	-2	True	NA	-22	True	AATAAA	-14	NA	17819356	17793251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_17793582_17795207_17795271_17796581_17797119_17818191
transcript_123808.known	chr21	-	1784	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	43.1530705744099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCCCAGTCTCAAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	23384920	23361103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_123817.known	chr21	-	2848	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.4882274061286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	NA	False	NA	NA	False	AAAAAG	-22	NA	23384846	23361763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
transcript_123821.known	chr21	-	1074	10	FSM	ENSG00000154719.14	ENST00000352957.9	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	100.700264199636	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	10	True	NA	NA	False	AATAAA	-20	NA	25607481	25585655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_123824.known	chr21	+	4351	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	6.09998988058258	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	-3	True	NA	15	True	AATAAA	-5	NA	25639257	25717562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
transcript_123826.known	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	46.3755469835633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	9916	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_123830.known	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	21.9443741208437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	3	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_123835.known	chr21	-	589	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	2527.54459654029	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-3	True	NA	0	True	AATAAA	-38	NA	25734904	25724479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
transcript_123838.known	chr21	-	526	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	4615	junction_3	391.063791329354	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTCTTGATGAATTGA	-3	True	NA	-20	True	AATAAA	-18	NA	25734904	25724499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
transcript_123839.known	chr21	-	589	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	2421.93490140975	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	675	False	NA	0	True	AATAAA	-38	NA	25735033	25724479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
transcript_123840.known	chr21	-	1179	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	2382.15257464523	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	35	False	NA	0	True	AATAAA	-38	NA	25735673	25724479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
transcript_123841.known	chr21	-	826	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	2407.42494979364	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-30	True	NA	0	True	AATAAA	-38	NA	25735646	25724479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
transcript_123842.known	chr21	-	647	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	2411.16933365443	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-23	True	NA	0	True	AATAAA	-38	NA	25735639	25724479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
transcript_123845.known	chr21	-	3583	18	FSM	ENSG00000142192.21	ENST00000346798.8	3583	18	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_11	192.437937687951	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-5	True	NA	-27	True	AATAAA	-19	NA	26170770	25880549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_123847.known	chr21	-	3543	17	FSM	ENSG00000142192.21	ENST00000357903.7	3543	17	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_10	200.586396208093	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	917	False	NA	-27	True	AATAAA	-19	NA	26170787	25880549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_123849.known	chr21	-	3355	16	FSM	ENSG00000142192.21	ENST00000348990.9	3355	16	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	261.58995903258	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-2	True	NA	-27	True	AATAAA	-19	NA	26170767	25880549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_123857.known	chr21	-	3072	4	FSM	ENSG00000166265.13	ENST00000299340.9	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	58.9594964549581	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTCTTGTGTCCA	16	True	NA	NA	False	AATAAA	-31	NA	26573255	26466208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26468632_26480271_26480430_26566265_26566369_26572867
transcript_123858.known	chr21	-	3099	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	113.877126763894	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATATTTTCATTGTCTT	-15	True	NA	NA	False	AATAAA	-24	NA	26573286	26466215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
transcript_123862.known	chr21	-	735	4	FSM	ENSG00000166265.13	ENST00000400043.3	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	175.807344050874	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTTCACCCTGGAA	95	False	NA	NA	False	NA	NA	NA	26573176	26477970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26478136_26480271_26480430_26566265_26566369_26572867
transcript_123868.known	chr21	-	5183	9	FSM	ENSG00000154734.16	ENST00000284984.8	5183	9	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_5	11.8321595661992	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGATGCTTTTTGAAT	0	True	NA	NA	False	ATTAAA	-16	NA	26845409	26835754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26840997_26841166_26841857_26841991_26842338_26842686_26844224
transcript_123872.known	chr21	-	1293	7	FSM	ENSG00000156239.12	ENST00000460212.1	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	37.1008385649465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-7	True	NA	-4	True	AATAAA	-17	NA	28885371	28872190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_28872740_28876311_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_123874.known	chr21	-	4861	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	25.1507455157894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-3	True	NA	-4	True	AATAAA	-17	NA	28885367	28872190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_123877.known	chr21	-	4781	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	34.2226167906547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-7	True	NA	-4	True	AATAAA	-17	NA	28885371	28872190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_123880.known	chr21	-	7756	30	FSM	ENSG00000198862.14	ENST00000614971.4	7756	30	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_8	16.2545886688742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCGCCATTCTCCTCC	-1	True	NA	-7	True	AATAAA	-26	NA	28992956	28928143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_28930511_28931154_28931323_28932469_28932665_28935108_28935330_28936525_28936698_28941219_28941407_28943261_28943337_28943666_28943905_28944382_28944597_28945806_28945952_28946151_28946288_28947463_28947607_28952159_28952265_28953216_28953377_28956761_28956949_28957331_28957477_28958385_28958540_28959457_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_123885.nic	chr21	-	1682	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	69	5567	-3	11	5prime_fragment	FALSE	canonical	3	89	junction_2	10.7542698956114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGTTAGATTTGCTG	9878	False	28992902	NA	False	AGTAAA	-9	NA	28992880	28966883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_123886.nic	chr21	-	1510	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	69	5739	-3	-161	5prime_fragment	FALSE	canonical	3	89	junction_2	10.7542698956114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACAACTTGGAGAAC	9878	False	28992902	16	True	AAAAAG	-10	NA	28992880	28967055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_123887.known	chr21	+	2924	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	14.58467698539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	-7	True	NA	8	True	AATAAA	-17	NA	29024667	29054488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_123888.known	chr21	+	2960	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	16.4531420206884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	NA	False	NA	8	True	AATAAA	-17	NA	29024628	29054488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_123897.known	chr21	-	636	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTTGTTTGAGACG	NA	False	NA	NA	False	AATAAA	-16	NA	29024890	29024254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29024300_29024900
transcript_123907.known	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	657.309641102057	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	8	True	NA	-20	True	AATAAA	-21	NA	29073639	29056323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
transcript_123908.known	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_9	166.806392110673	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-1	True	NA	-22	True	AATAAA	-19	NA	29073648	29056325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
transcript_123931.known	chr21	+	5618	5	FSM	ENSG00000156273.16	ENST00000286800.8	5618	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	18.8878267675241	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	-2	True	NA	14	True	AATAAA	-27	NA	29298921	29346148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_29298954_29321220_29321515_29326058_29327394_29329486_29329694_29342398
transcript_123942.known	chr21	-	4160	13	FSM	ENSG00000156299.14	ENST00000636887.1	4160	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	19.5638200655075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAATGCTTGTCAAAC	2	True	NA	-47	True	NA	NA	NA	31160909	31118457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31160444
transcript_123951.nnic	chr21	-	2831	8	NNC	ENSG00000156299.14	novel	7200	29	NA	NA	-497	-13109	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	13.9474231399531	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTAGATCAGGTAATC	NA	False	NA	64	True	AAAAAG	-5	NA	31559474	31225739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463915_31464036_31558926
transcript_123952.nic	chr21	-	2764	8	ISM	ENSG00000156299.14	ENST00000286827.7	7200	29	-497	107324	-497	-13109	5prime_fragment	FALSE	canonical	3	28	junction_4	12.2873753029984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTAGATCAGGTAATC	NA	False	NA	64	True	AAAAAG	-5	NA	31559474	31225739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463982_31464036_31558926
transcript_123953.nnic	chr21	-	2389	8	NNC	ENSG00000156299.14	novel	7200	29	NA	NA	-114	-13168	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	13.9474231399531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAGAAAATGGGTGAAA	-4	True	NA	5	True	NA	NA	NA	31559091	31225798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463915_31464036_31558926
transcript_123957.nnic	chr21	-	2654	7	NNC	ENSG00000156299.14	novel	7200	29	NA	NA	-497	-13109	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	19.1891172861657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTAGATCAGGTAATC	NA	False	NA	64	True	AAAAAG	-5	NA	31559474	31225739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31339242_31339423_31463915_31464036_31558926
transcript_123963.known	chr21	-	1187	4	ISM	ENSG00000156299.14	ENST00000541036.6	7218	28	-18	147878	-18	-53665	5prime_fragment	FALSE	canonical	1	3	junction_3	13.1233464566864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAGCCAATTCCTTGG	-12	True	NA	NA	False	NA	NA	NA	31344279	31266295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_31266984_31276731_31276909_31339242_31339423_31344137
transcript_123964.known	chr21	+	822	2	FSM	ENSG00000237594.2	ENST00000433071.2	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGTCTCTTTTCTTTC	2	True	NA	27	True	NA	NA	NA	31559244	31560487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_31559596_31560016
transcript_123967.known	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1068.55542088373	739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	1	True	NA	59	True	ATTAAA	-22	NA	31659692	31668931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_123972.known	chr21	-	4127	20	FSM	ENSG00000156304.15	ENST00000399804.5	4127	20	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_2	76.3584998452363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATGTGTGCTATTCTT	16	True	NA	88	True	AATAAA	-19	NA	31732075	31671032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31672355_31685048_31685175_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
transcript_123973.known	chr21	-	4269	20	FSM	ENSG00000156304.15	ENST00000286835.12	4269	20	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	44.7064912525106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGAAAAGGATTGTTC	-27	True	NA	NA	False	NA	NA	NA	31732118	31670999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31672355_31685048_31685241_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
transcript_123975.known	chr21	-	1282	7	FSM	ENSG00000156304.15	ENST00000485790.1	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_2	38.2640678560041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	9	True	NA	NA	False	ATTAAA	-6	NA	31731961	31700758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
transcript_123978.known	chr21	+	7680	11	FSM	ENSG00000142149.9	ENST00000270112.7	7680	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.29364759102383	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTCAGCTCTTTGTATT	-5	True	NA	NA	False	AATAAA	-15	NA	31873019	32004064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_31873936_31924467_31924761_31940164_31940221_31946035_31946172_31958842_31958971_31968249_31968386_31974554_31974718_31983525_31983610_31990128_31990177_31995767_31995949_31998525
transcript_123979.known	chr21	-	1546	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_1	15.2704780540755	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTAAGATTGATTTTT	-15	True	NA	-22	True	AATAAA	-13	NA	32279049	32268227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
transcript_123985.known	chr21	-	10818	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_21	21.4633779447175	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCGGATATGTCTT	6	True	NA	NA	False	ATTAAA	-21	NA	32393012	32311017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
transcript_123986.known	chr21	+	831	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGTACATATTTTAA	-12	True	NA	NA	False	AATAAA	-24	NA	32393129	32393960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_32393100_32394000
transcript_123987.known	chr21	-	4781	8	FSM	ENSG00000265590.10	ENST00000673807.1	4781	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	422.504389543675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAGAGCAAACATATA	-16	True	NA	NA	False	NA	NA	NA	32612865	32573784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_123988.known	chr21	-	3883	7	FSM	ENSG00000265590.10	ENST00000673945.1	3883	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	403.747205012686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTACGGCAGGAAATTTG	314	False	NA	NA	False	AATAAA	-13	NA	32612535	32574136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32576924_32578693_32578832_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_123991.nic	chr21	-	1642	7	NIC	ENSG00000159079.19	novel	3516	7	NA	NA	-264	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	320.94361740897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-18	True	NA	NA	False	AATAAA	-19	NA	32612867	32601666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32609955_32612104
transcript_123992.known	chr21	-	3516	7	FSM	ENSG00000159079.19	ENST00000290155.8	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_6	72.7682775818022	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCGACCATCAAACTG	1	True	NA	NA	False	AATAAA	-19	NA	32612377	32599353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_123996.known	chr21	-	1243	6	FSM	ENSG00000159079.19	ENST00000300260.7	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	372.044298437699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTACTGCCCTCTGT	246	False	NA	NA	False	TTTAAA	-12	NA	32612603	32601784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32609837_32610006_32612104
transcript_123998.known	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	331.537388540116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	26	True	NA	NA	False	AATAAA	-19	NA	32612352	32601666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_124003.known	chr21	-	2503	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_4	47.5341982156005	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-1	True	NA	NA	False	AATAAA	-19	NA	32612586	32601666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_124010.known	chr21	-	1872	2	FSM	ENSG00000159079.19	ENST00000483315.1	1872	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTATAATTTAAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	32604513	32601809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32603293_32604124
transcript_124011.known	chr21	-	3892	18	FSM	ENSG00000159086.15	ENST00000331923.9	3892	18	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	178.64234241968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTGTATTTTCCTG	1	True	NA	NA	False	ATTAAA	-17	NA	32771755	32733898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
transcript_124013.known	chr21	-	1692	6	FSM	ENSG00000159086.15	ENST00000464256.1	1692	6	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	13.2453765518388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGATGCCATTCCAAA	247	False	32771815	NA	False	AAAAAG	-10	NA	32771792	32759401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
transcript_124015.nic	chr21	-	782	3	ISM	ENSG00000159086.15	ENST00000464256.1	1692	6	-87	5024	-87	-5024	5prime_fragment	FALSE	canonical	3	175	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGAAAAAGAGGAAGAAAAG	160	False	NA	-2	True	NA	NA	NA	32771879	32764425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_32764525_32769813_32769943_32771325
transcript_124016.nic	chr21	-	600	2	ISM	ENSG00000159086.15	ENST00000464256.1	1692	6	-87	10495	-87	-10495	5prime_fragment	FALSE	canonical	3	178	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGTAAAATTGCTCAAGA	160	False	NA	NA	False	AAGAAA	-44	NA	32771879	32769896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_32769943_32771325
transcript_124017.known	chr21	+	4284	9	FSM	ENSG00000159110.21	ENST00000404220.7	4284	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	34.8207463303129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTGTCTTCCATTGG	26	True	NA	26	True	AATACA	-14	NA	33229970	33265675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33241839_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
transcript_124018.known	chr21	+	4074	9	FSM	ENSG00000159110.21	ENST00000342136.9	4074	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	49.6531721041063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGGTCTTGAGTTG	-7	True	NA	15	True	AATACA	-3	NA	33229937	33265664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33241839_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262792
transcript_124019.known	chr21	+	1389	9	FSM	ENSG00000159110.21	ENST00000382264.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	19.0455867591419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGGACTCTCTCTCTCTT	-44	True	NA	12	True	AATAAA	-19	NA	33229900	33262756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
transcript_124020.nic	chr21	+	2927	9	ISM	ENSG00000249624.10	ENST00000646150.1	3770	15	0	32634	0	-18686	5prime_fragment	FALSE	canonical	3	5	junction_8	42.4175671155242	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAACACAAAGATGCTTCA	-44	True	NA	NA	False	GATAAA	-37	NA	33229900	33264526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262792
transcript_124024.known	chr21	+	841	7	FSM	ENSG00000159110.21	ENST00000443073.5	841	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	54.5303177650338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGGTCATTTACATCAA	106	False	NA	111	True	NA	NA	NA	33230181	33262855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262792
transcript_124025.known	chr21	+	1941	7	FSM	ENSG00000243646.10	ENST00000290200.7	1941	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	5.64702478203247	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCATGATACTACCTG	-11	True	NA	18	True	ATTAAA	-24	NA	33266366	33297221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33266515_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_124028.known	chr21	+	6075	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	15.0253119767944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	-23	True	NA	NA	False	AAGAAA	-42	NA	33324969	33359864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
transcript_124035.nic	chr21	+	1232	8	ISM	ENSG00000142166.13	ENST00000270139.8	6075	11	-10	10328	-10	370	5prime_fragment	FALSE	canonical	3	158	junction_7	11.0509026318936	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGAGGTAAAAAGACTGT	-33	True	NA	4	True	AAAACA	-8	NA	33324959	33349536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388
transcript_124036.known	chr21	+	1397	7	FSM	ENSG00000142166.13	ENST00000652513.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	65.8341772097813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	-18	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33348549
transcript_124040.known	chr21	+	783	5	FSM	ENSG00000142166.13	ENST00000652654.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	80.2694680435843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGTTCCATTCCATAA	509	False	NA	NA	False	NA	NA	NA	33324903	33345358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343534_33343677_33345245
transcript_124059.known	chr21	-	3062	9	FSM	ENSG00000142188.17	ENST00000420455.5	3062	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	49.1928602543093	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	10	True	NA	-3	True	AATAAA	-45	NA	33479943	33432484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33432803_33439213_33439298_33448781_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_124061.known	chr21	+	1684	8	FSM	ENSG00000159128.15	ENST00000405436.5	1684	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	216.029098569085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTTTTTTAAAGTCTAT	37	False	NA	7	True	AATAAA	-13	NA	33403465	33437502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33410840_33410893_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_124062.known	chr21	+	1742	8	FSM	ENSG00000159128.15	ENST00000381995.5	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	214.444798091657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTTTTCTTTATT	3	True	NA	26	True	AATAAA	-32	NA	33403431	33437521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33410835_33410893_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_124066.known	chr21	-	982	8	FSM	ENSG00000142188.17	ENST00000442441.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	86.0306067985252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGTTACATCATCTTG	17	True	NA	46	True	NA	NA	NA	33479936	33450546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33450864_33455726_33455785_33456003_33456098_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_124067.known	chr21	+	1699	7	FSM	ENSG00000159128.15	ENST00000290219.11	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	22.2442252181449	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	-16	True	NA	21	True	AATAAA	-27	NA	33403412	33437516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_124070.known	chr21	-	2332	7	FSM	ENSG00000142188.17	ENST00000542230.7	2332	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	34.6538437823121	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATATTGTTGTTTGTT	-21	True	NA	-4	True	AATAAA	-17	NA	33479974	33449140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_124077.known	chr21	+	966	6	FSM	ENSG00000159128.15	ENST00000545369.2	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	178.785458021619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCCAAACGCTTTGAAC	12	True	NA	NA	False	NA	NA	NA	33403440	33436944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_124083.known	chr21	-	1485	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATAACTGAA	10	True	NA	NA	False	NA	NA	NA	33491716	33488054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33489425_33491601
transcript_124088.known	chr21	-	3318	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_10	317.746515437325	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGTTTTCTTGGTCTT	-6	True	NA	-9	True	AATAGA	-43	NA	33542117	33503932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_124095.known	chr21	-	3490	22	FSM	ENSG00000159131.17	ENST00000381831.7	3490	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_21	411.157522047825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTTCTTGGTCTTTT	14	True	NA	-7	True	AATAGA	-45	NA	33542842	33503930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539324_33542586
transcript_124116.known	chr21	+	8393	12	FSM	ENSG00000159140.21	ENST00000356577.10	8393	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_11	238.899923720622	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	-24	True	NA	15	True	AATAAA	-1	NA	33543037	33577481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576364
transcript_124125.known	chr21	-	2149	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_10	94.1119014790372	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTTTTGATTTCTT	-3	True	NA	-4	True	AATAAA	-15	NA	33542114	33524008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_124130.known	chr21	-	2500	10	FSM	ENSG00000159147.18	ENST00000303071.10	2500	10	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_4	36.1389636176527	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGGGTAAAGAAATAAT	-4	True	NA	-5	True	AATAAA	-19	NA	33588684	33577550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33587521_33587603_33588320
transcript_124135.known	chr21	-	1719	9	FSM	ENSG00000159147.18	ENST00000437395.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_8	88.3487407946486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTACTACAGTAGCATCT	-3	True	NA	NA	False	TATAAA	-6	NA	33588634	33578200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33588320
transcript_124140.known	chr21	-	1820	9	FSM	ENSG00000159147.18	ENST00000417871.5	1820	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	115.107558396484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAACATCTACTGAGCTA	10	True	NA	-39	True	AATAAA	-4	NA	33588670	33577916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33584589_33584769_33585977_33586061_33587521_33587603_33588320
transcript_124148.known	chr21	+	7477	7	FSM	ENSG00000159140.21	ENST00000300278.8	7477	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	366.525578916397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	2	True	NA	13	True	AATAAA	-19	NA	33543063	33560667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33559876
transcript_124152.known	chr21	-	806	6	FSM	ENSG00000159131.17	ENST00000476524.1	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_5	94.0693361303246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAAATGAAAAAATAATCG	7497	False	NA	NA	False	CATAAA	-44	NA	33542079	33531335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_124156.nic	chr21	+	514	3	ISM	ENSG00000159140.21	ENST00000381679.8	7860	5	-95	9434	-68	2583	5prime_fragment	FALSE	canonical	3	1127	junction_2	49.5	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCCAGAAGAATCTGAG	522	False	NA	NA	False	TATAAA	-2	NA	33542969	33549622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33543170_33546212_33546380_33549475
transcript_124157.known	chr21	+	658	2	FSM	ENSG00000159140.21	ENST00000475072.1	658	2	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGGCGACAAGAATGAAA	-10	True	NA	NA	False	NA	NA	NA	33543051	33546752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33543170_33546212
transcript_124161.known	chr21	+	5437	30	FSM	ENSG00000205726.15	ENST00000381291.8	5437	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	115.171381370553	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATGGAAATGTCTCTG	-16	True	NA	15	True	ATTAAA	-15	NA	33642477	33838494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33802429_33802445_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_124165.known	chr21	+	5408	29	FSM	ENSG00000205726.15	ENST00000399352.5	5408	29	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_23	49.8538041248036	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAATGTCTCTGTGTT	2	True	NA	19	True	ATTAAA	-19	NA	33642495	33838498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_124168.known	chr21	+	3913	29	FSM	ENSG00000205726.15	ENST00000399353.5	3913	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	88.1174063163367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTCCTCAAAGAGACC	NA	False	NA	NA	False	NA	NA	NA	33642399	33837018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750253_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_12417.known	chr1	+	1728	3	FSM	ENSG00000163399.16	ENST00000488733.1	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	2312	junction_2	160.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	2	True	NA	NA	False	NA	NA	NA	116373268	116386144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116373524_116384013_116384125_116384782
transcript_124170.known	chr21	+	5191	27	FSM	ENSG00000205726.15	ENST00000399349.5	5191	27	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_23	76.100768216076	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAATGTCTCTGTG	4	True	NA	17	True	ATTAAA	-17	NA	33642497	33838496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_124179.nic	chr21	+	2254	17	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-93	42864	5	19350	5prime_fragment	FALSE	canonical	3	345	junction_12	38.2225698213765	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCATAGAATTAGAAAAAC	NA	False	NA	4	True	NA	NA	NA	33642404	33794429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340
transcript_12418.known	chr1	-	4746	2	FSM	ENSG00000203865.12	ENST00000674823.1	4746	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAGATCTTGTTCCTAA	-29	True	NA	NA	False	NA	NA	NA	116418625	116401569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116406149_116418458
transcript_12419.known	chr1	-	1086	6	FSM	ENSG00000116815.16	ENST00000369489.10	1086	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	9.09065454189081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGTTTGGCTACTGT	-9	True	NA	-1	True	AATAAA	-22	NA	116571026	116514533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116514823_116519230_116519268_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_124198.nic	chr21	+	1768	13	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-93	62443	5	-229	5prime_fragment	FALSE	canonical	3	345	junction_12	43.50758235322	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGGAATTTGAATTAG	NA	False	NA	18	True	AAGAAA	-43	NA	33642404	33774850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728
transcript_12420.known	chr1	-	874	6	FSM	ENSG00000116815.16	ENST00000464088.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	29.0544316757358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATTACAATTTTTGAAC	33	True	NA	NA	False	AAAAAG	-19	NA	116570984	116514738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116514823_116519230_116519303_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_124203.nic	chr21	+	1376	11	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-93	69472	5	-4461	5prime_fragment	FALSE	canonical	3	382	junction_6	36.9839154227889	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGTAAGGCAGCCTT	NA	False	NA	21	True	AAGAAA	-1	NA	33642404	33767821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712
transcript_124209.known	chr21	-	1482	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	98.9453763447287	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGTAACGTATTAATT	-5	True	NA	-27	True	GATAAA	-26	NA	33641747	33589466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_12421.known	chr1	-	892	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.2192186706253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTTACGTGTGT	-22	True	NA	NA	False	AATAAA	-36	NA	116571039	116521786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
transcript_124216.known	chr21	-	1685	12	FSM	ENSG00000205758.12	ENST00000290244.9	1685	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	126.863107063812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATTTTGAAGTCTTAA	2014	False	NA	-44	True	NA	NA	NA	33641918	33589385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_124219.nic	chr21	-	1968	12	NIC	ENSG00000205758.12	novel	2224	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	96.6435043970818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTACGTAATTAGTAT	2166	False	NA	NA	False	NA	NA	NA	33641766	33594642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_124220.known	chr21	-	2558	12	FSM	ENSG00000205758.12	ENST00000420072.5	2558	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	119.008993340284	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1594	False	NA	NA	False	NA	NA	NA	33642338	33594661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599286_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_124228.nic	chr21	-	1150	11	NIC	ENSG00000205758.12	novel	2224	13	NA	NA	-7	68	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	97.133156028207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATCAATGCTAGGAAAT	2166	False	NA	NA	False	ATTAAA	-21	NA	33641766	33595268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_33595529_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_124229.known	chr21	-	627	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	129.777347792286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCTGGTTTTTGGAA	2210	False	NA	-18	True	AATAAA	-13	NA	33641722	33616286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_124230.known	chr21	-	1598	13	FSM	ENSG00000205758.12	ENST00000381554.8	1598	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.9453763447287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTTTCAACTATTC	1	True	NA	1	True	NA	NA	NA	33641741	33589340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_124231.known	chr21	-	612	3	FSM	ENSG00000205758.12	ENST00000399442.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTTGATTTTTGAAT	2211	False	NA	NA	False	AATAAA	-13	NA	33641721	33639744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33640189_33641178_33641306_33641680
transcript_124232.known	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1938.44804323627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	5	True	NA	-29	True	AATAAA	-18	NA	33915814	33903454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_124238.known	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	3758	junction_6	292.625281812005	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	15	False	33915819	-27	True	AATAAA	-20	NA	33915804	33903452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_12424.known	chr1	-	7326	12	FSM	ENSG00000143061.18	ENST00000369483.5	7326	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	32.653199000384	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTACTGCAGTCTTCTA	48	False	NA	-6	True	AGTAAA	-24	NA	116667755	116574398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116606491_116606552_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_124240.known	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1729.64789480403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	58	False	NA	-27	True	AATAAA	-20	NA	33915761	33903452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
transcript_124242.known	chr21	+	9124	3	FSM	ENSG00000237945.8	ENST00000427447.5	9124	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAATGTCAGCCTGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	33931159	33977691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33931743_33945809_33945896_33969236
transcript_124245.known	chr21	+	728	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	33931162	33938372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33931743_33938224
transcript_124246.known	chr21	-	591	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	0	1	0	-1	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTATTTGGTAATACG	NA	False	NA	-5	True	AATAAA	-18	NA	33968573	33967100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33967351_33968232
transcript_124249.known	chr21	+	1061	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	566.922393277951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	-8	True	NA	19	True	AATAAA	-19	NA	34073548	34143034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_12425.known	chr1	-	7235	11	FSM	ENSG00000143061.18	ENST00000369486.8	7235	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	12.3142194230897	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTTTACATTTACTGC	-22	True	NA	-15	True	AGTAAA	-15	NA	116667733	116574407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_124251.known	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	1362	junction_2	2.5	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	21	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34073746_34125340_34125481_34142407
transcript_124253.known	chr21	+	3934	2	FSM	ENSG00000243927.6	ENST00000483977.5	3934	2	0	0	0	0	multi-exon	FALSE	canonical	3	1362	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	NA	False	NA	19	True	AATAAA	-19	NA	34122173	34143034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34125481_34142407
transcript_124254.known	chr21	+	840	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	-4	True	NA	NA	False	AATAAA	-18	NA	34375506	34389151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
transcript_124256.known	chr21	+	1220	5	FSM	ENSG00000205670.12	ENST00000481710.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	99.6857562543416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375479	34402777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710_34399900_34402090
transcript_124257.known	chr21	-	2503	4	FSM	ENSG00000159200.18	ENST00000313806.9	2503	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	1.63299316185545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCAGTTTAAAAGGCTT	6	True	NA	42	True	AATAAA	-18	NA	34615113	34516441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34614759
transcript_124258.known	chr21	+	4197	6	FSM	ENSG00000159212.13	ENST00000349499.3	4197	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTCTTTTGGGTTTTA	-17	True	NA	9	True	TATAAA	-16	NA	34668993	34718223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34670763_34707279_34707390_34707943_34708070_34708699_34708807_34709356_34709539_34716320
transcript_124259.known	chr21	+	2632	3	FSM	ENSG00000234380.2	ENST00000420877.1	2632	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATGGAGATAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	34745756	34784886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34746017_34782124_34782191_34782580
transcript_124276.known	chr21	-	2991	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	72.6041002416587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-27	True	NA	-7	True	ATTAAA	-17	NA	36060526	36034540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_124284.known	chr21	-	2761	11	FSM	ENSG00000185917.14	ENST00000481477.5	2761	11	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_7	87.7784142030374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	170	False	NA	-7	True	ATTAAA	-17	NA	36060385	36034540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_124287.nic	chr21	-	1648	8	NIC	ENSG00000185917.14	novel	1212	8	NA	NA	-341	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_6	95.0074110965313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	NA	False	NA	-9	True	AATAAA	-15	NA	36060867	36043685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058925_36060346
transcript_124294.nic	chr21	-	1554	7	ISM	ENSG00000185917.14	ENST00000332131.9	2991	12	-341	9145	-341	0	5prime_fragment	FALSE	canonical	3	229	junction_2	29.3394879906851	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	NA	False	NA	-9	True	AATAAA	-15	NA	36060867	36043685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_124295.known	chr21	-	1165	7	FSM	ENSG00000185917.14	ENST00000399208.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	101.944020586464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	191	False	NA	-9	True	AATAAA	-15	NA	36060364	36043685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060281
transcript_124296.nic	chr21	-	1584	7	NIC	ENSG00000185917.14	novel	1165	7	NA	NA	-322	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	87.6820328738385	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	NA	False	NA	-9	True	AATAAA	-15	NA	36060848	36043685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
transcript_124308.known	chr21	+	1208	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	31	True	NA	31	True	AATAAA	-17	NA	36070023	36073164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36070405_36070949_36071058_36072445
transcript_124310.known	chr21	+	2336	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTGTCTGAGGAGTT	8	False	NA	12	True	AGTAAA	-15	NA	36104880	36109690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36105124_36107597
transcript_124312.known	chr21	+	998	3	FSM	ENSG00000159231.6	ENST00000290354.6	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGATGCTGTGGTTTG	-3	True	NA	12	True	AATAAA	-20	NA	36135078	36146562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36135482_36137824_36137933_36146075
transcript_124317.known	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_11	29.1086517974889	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	-10	True	NA	16	True	AATAAA	-17	NA	36385391	36419015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_124326.nic	chr21	+	1729	7	NIC	ENSG00000159259.8	novel	1152	6	NA	NA	-33	484	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	91.8418023923021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTGTTGTCGTGTTT	NA	False	NA	8	True	AATAAA	-23	NA	36385358	36398723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36397742
transcript_124328.known	chr21	-	6010	12	FSM	ENSG00000159267.17	ENST00000336648.8	6010	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	27.1159128054493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGATTGTTTTTAGGATT	-17	True	NA	-3	True	AATAAA	-16	NA	36990236	36750887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36946008_36946155_36962035_36962171_36990157
transcript_124337.known	chr21	-	8273	11	FSM	ENSG00000159267.17	ENST00000674895.3	8273	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	14.3878420897645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGAATGACTTTTAAAG	-22	True	NA	-16	True	AATAAA	-17	NA	36966669	36748625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36966443
transcript_124339.nic	chr21	-	4132	11	NIC	ENSG00000159267.17	novel	6010	12	NA	NA	-12	-560	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	15.2541797550704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTCTCCAAATGCCC	NA	False	NA	63	True	AAAACA	-25	NA	36990248	36752631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36990157
transcript_124342.known	chr21	-	4757	11	FSM	ENSG00000159267.17	ENST00000675307.1	4757	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	20.6254696916216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTTACTGATAGCTGT	9430	False	NA	-17	True	AATAAA	-1	NA	36980789	36752064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36980640
transcript_124348.known	chr21	+	2235	2	FSM	ENSG00000159263.16	ENST00000460783.1	2235	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCTGCAGGACGCCAT	-11	True	NA	NA	False	AATAAA	-6	NA	36699132	36710613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36699922_36709167
transcript_124349.known	chr21	+	2540	2	FSM	ENSG00000224790.3	ENST00000653177.1	2540	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCGCCACTGCACTC	7	True	NA	NA	False	NA	NA	NA	36966460	36970942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36966612_36968553
transcript_124350.known	chr21	+	2189	4	FSM	ENSG00000224790.3	ENST00000637940.2	2189	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.54247233265651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTATCTCTTTATCCTG	31	False	NA	NA	False	AATAAA	-24	NA	36966484	36975164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36966612_36968553_36968808_36972006_36972250_36973599
transcript_124351.known	chr21	+	2005	4	FSM	ENSG00000183145.9	ENST00000485272.5	2005	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	33.7934904974316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTGATAATCACCCT	NA	False	NA	14	True	AATAAA	-11	NA	37006149	37019659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37006234_37008156_37008224_37013550_37013619_37017873
transcript_124352.known	chr21	+	2099	4	FSM	ENSG00000183145.9	ENST00000329553.3	2099	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	7.87400787401181	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATAATCACCCTTTT	-8	True	NA	17	True	AATAAA	-14	NA	37006701	37019662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37006877_37008156_37008224_37013550_37013619_37017873
transcript_124353.known	chr21	+	1885	3	FSM	ENSG00000183145.9	ENST00000490393.1	1885	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTGATAATCACCCT	NA	False	NA	14	True	AATAAA	-11	NA	37006201	37019659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37006234_37008156_37008224_37017873
transcript_124357.known	chr21	-	972	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	70.7926549862343	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	128	False	NA	-4	True	AATAAA	-21	NA	37073170	37065373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
transcript_12436.known	chr1	+	6314	9	FSM	ENSG00000134247.10	ENST00000393203.3	6314	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	12.3535167057806	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTGTGTGAGGAGCT	2	True	NA	10	True	ATTAAA	-17	NA	116909915	116990353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116910253_116941714_116942084_116944678_116945093_116949191_116949573_116961242_116961669_116966910_116967331_116974215_116974324_116984679_116984986_116986800
transcript_124360.known	chr21	-	688	5	FSM	ENSG00000185808.14	ENST00000399102.5	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	71.7160198282085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	398	False	NA	-4	True	AATAAA	-21	NA	37072900	37065373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072847
transcript_124361.known	chr21	-	656	5	FSM	ENSG00000185808.14	ENST00000399103.5	656	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	78.4314987744082	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-4	True	NA	-4	True	AATAAA	-21	NA	37073011	37065373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072990
transcript_124368.known	chr21	+	3771	33	FSM	ENSG00000182670.13	ENST00000418766.5	3771	33	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	117.609506817051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAGAAGAAAAA	-17	True	NA	NA	False	NA	NA	NA	37073250	37165751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37073474_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549
transcript_124375.nic	chr21	+	4022	27	NIC	ENSG00000182670.13	novel	7712	46	NA	NA	-32	-3227	combination_of_known_junctions	FALSE	canonical	3	171	junction_1	51.2724478187403	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAAGAAAGACTAAAATCA	NA	False	NA	NA	False	ATTAAA	-26	NA	37073193	37182852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773
transcript_124379.nic	chr21	+	2601	26	ISM	ENSG00000182670.13	ENST00000418766.5	3771	33	-25	13793	0	0	5prime_fragment	FALSE	canonical	3	59	junction_1	124.618111043299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTTAGCACAAGAAAGAA	-1	True	NA	NA	False	AAAAAG	-8	NA	37073225	37151958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073474_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892
transcript_124381.known	chr21	+	2451	26	FSM	ENSG00000182670.13	ENST00000450533.5	2451	26	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	126.081205577992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTTAGCACAAGAAAGAA	-1	True	NA	NA	False	AAAAAG	-8	NA	37073266	37151958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37073365_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892
transcript_124387.nic	chr21	+	2422	25	ISM	ENSG00000182670.13	ENST00000450533.5	2451	26	-37	1074	4	-1074	5prime_fragment	FALSE	canonical	3	41	junction_1	127.096310812794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATTTTTAACAATCAA	3	True	NA	NA	False	AAGAAA	-41	NA	37073229	37150884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073365_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819
transcript_124389.nic	chr21	+	2811	24	NIC	ENSG00000182670.13	novel	3626	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_1	53.7011614846598	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACATTAAAACAAAAG	-8	True	NA	NA	False	AAAAAG	-7	NA	37073259	37165765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549
transcript_124404.known	chr21	+	2025	18	FSM	ENSG00000182670.13	ENST00000540756.5	2025	18	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	57.886059183113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAGGTCTCTGAGTCA	13	True	NA	10	True	AATAAA	-17	NA	37073280	37153323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950
transcript_124406.nic	chr21	+	1753	17	ISM	ENSG00000182670.13	ENST00000540756.5	2025	18	-172	1365	-117	0	5prime_fragment	FALSE	canonical	3	171	junction_1	59.5912837061764	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTTAGCACAAGAAAGAA	NA	False	NA	NA	False	AAAAAG	-8	NA	37073108	37151958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892
transcript_124408.nic	chr21	+	1743	17	NIC	ENSG00000182670.13	novel	2451	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	76.7703301656962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTTAGCACAAGAAAGAA	1	True	NA	NA	False	AAAAAG	-8	NA	37073227	37151958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_37073474_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892
transcript_124410.nic	chr21	+	1545	16	ISM	ENSG00000182670.13	ENST00000540756.5	2025	18	-30	2439	0	-1074	5prime_fragment	FALSE	canonical	3	171	junction_1	61.4699926793554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATTTTTAACAATCAA	-17	True	NA	NA	False	AAGAAA	-41	NA	37073250	37150884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819
transcript_124412.nic	chr21	+	1677	16	NIC	ENSG00000182670.13	novel	3771	33	NA	NA	2	-1074	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	79.1722734856647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATTTTTAACAATCAA	1	True	NA	NA	False	AAGAAA	-41	NA	37073227	37150884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_37073474_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819
transcript_124422.nic	chr21	+	1170	11	NIC	ENSG00000182670.13	novel	3771	33	NA	NA	2	5218	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	96.3277737726768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTTAGTAGAAATGACAC	1	True	NA	NA	False	NA	NA	NA	37073227	37140670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_37073474_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560
transcript_124426.nic	chr21	+	563	6	ISM	ENSG00000182670.13	ENST00000492275.5	769	9	28	9268	3	-9268	5prime_fragment	FALSE	canonical	3	171	junction_1	99.3478736561583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTGTTTTTATATC	-14	True	NA	NA	False	NA	NA	NA	37073253	37126143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079
transcript_124427.nic	chr21	+	645	6	ISM	ENSG00000182670.13	ENST00000463216.5	842	9	4	9283	0	-9268	5prime_fragment	FALSE	canonical	3	97	junction_1	128.522994051648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTGTTTTTATATC	13	True	NA	NA	False	NA	NA	NA	37073280	37126143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073474_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079
transcript_124432.known	chr21	-	3056	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.7947664627449	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCTTTCCTTAGAG	-1	True	NA	NA	False	AATAAA	-20	NA	37267334	37223421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_124434.known	chr21	-	988	7	FSM	ENSG00000157538.14	ENST00000398998.1	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	146.376986655083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGGAGGGAAGCATAG	-10	True	NA	NA	False	NA	NA	NA	37267532	37225543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37267237
transcript_124435.known	chr21	-	937	7	FSM	ENSG00000157538.14	ENST00000476950.5	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	129.90605579931	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGCCAGCGGCATAT	-13	True	NA	-106	True	NA	NA	NA	37267346	37225471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37238459_37238610_37240495_37240640_37267237
transcript_124439.known	chr21	-	821	5	FSM	ENSG00000157538.14	ENST00000399001.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	161.258139329461	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCACAGAAAACATTG	-18	True	NA	-26	True	NA	NA	NA	37267351	37225298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37267237
transcript_124441.known	chr21	-	959	2	FSM	ENSG00000157538.14	ENST00000498789.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTATTCCTGGGCCTG	-7	True	NA	-15	True	ATTAAA	-18	NA	37267340	37261081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37261938_37267237
transcript_124443.known	chr21	-	19659	4	FSM	ENSG00000157542.11	ENST00000609713.2	19659	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTTTTTATGT	-6	True	NA	NA	False	AATAAA	-18	NA	37916457	37607372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37625485_37714210_37715132_37840657_37840710_37915883
transcript_124447.known	chr21	+	3668	10	FSM	ENSG00000157557.13	ENST00000360938.8	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	24.569377708596	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGATAGTCCTCGT	-2	True	NA	66	True	AATAAA	-19	NA	38805928	38824955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_38806121_38810034_38810107_38813002_38813115_38814272_38814393_38814780_38814982_38817007_38817092_38818424_38818647_38819502_38819767_38821585_38821705_38822673
transcript_12445.known	chr1	+	9439	23	FSM	ENSG00000116830.12	ENST00000369466.9	9439	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_9	27.2816652020793	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAAATCAGATTCATTA	-5	True	NA	43	True	AATAAA	-22	NA	117060325	117107453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379
transcript_124459.known	chr21	-	959	7	FSM	ENSG00000183527.12	ENST00000411828.5	959	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	317.185233297867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATTGTTTTGTAGTG	2007	False	NA	NA	False	AAGAAA	-45	NA	39183287	39175587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183063
transcript_124460.known	chr21	-	1754	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_3	75.6651982236366	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCACAAACTGAACTGCA	-21	True	NA	NA	False	NA	NA	NA	39183451	39174768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
transcript_124463.known	chr21	-	760	6	FSM	ENSG00000183527.12	ENST00000431628.1	760	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_5	328.815814704828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	1	True	NA	NA	False	AAGAAA	-43	NA	39183385	39175589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39183251
transcript_124464.known	chr21	-	907	6	FSM	ENSG00000183527.12	ENST00000380900.2	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	336.843821377207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-8	True	NA	NA	False	AAGAAA	-43	NA	39183488	39175589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39180284_39180437_39181771_39181879_39183251
transcript_124467.known	chr21	-	17728	41	FSM	ENSG00000185658.14	ENST00000342449.8	17728	41	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	71.9516808351271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCATGGGGTTTGATTTT	5	True	NA	-5	True	AATAAA	-16	NA	39313632	39185481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39197416_39198762_39199663_39200218_39200387_39202324_39202546_39206107_39206275_39209994_39210148_39210785_39210930_39212665_39212708_39213480_39213554_39215236_39215363_39218151_39218273_39218504_39218661_39224407_39224470_39225085_39225198_39228499_39228583_39229311_39229437_39232176_39232285_39232372_39232499_39236594_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_124472.known	chr21	-	10141	42	FSM	ENSG00000185658.14	ENST00000333229.6	10141	42	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	72.3951825940079	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCGCTGTATTTCTTGC	7805	False	NA	-1	True	AGTAAA	-22	NA	39313819	39184175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39187418_39196497_39197416_39198762_39199663_39200218_39200387_39202324_39202546_39206107_39206275_39209994_39210148_39210785_39210930_39212665_39212708_39213480_39213554_39215236_39215363_39218151_39218273_39218504_39218661_39224407_39224470_39225085_39225198_39228499_39228583_39229311_39229437_39232176_39232285_39232372_39232499_39236594_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_124478.known	chr21	-	2495	5	FSM	ENSG00000185658.14	ENST00000341322.4	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	25.043711785596	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	-5	True	NA	32	True	AATAAA	-18	NA	39313642	39296436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_124481.known	chr21	+	1028	1	FSM	ENSG00000255568.3	ENST00000603064.2	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGTGTACAAGTTGGCT	32	False	NA	NA	False	AATGAA	-24	NA	39313934	39314962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39313900_39315000
transcript_124483.known	chr21	-	1552	8	FSM	ENSG00000205581.11	ENST00000431390.5	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2488.21822161308	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	242	False	NA	-2	True	AATAAA	-19	NA	39349140	39342314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_124487.known	chr21	-	1303	7	FSM	ENSG00000205581.11	ENST00000288344.14	1303	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	2305.70847150188	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	391	False	NA	-2	True	AATAAA	-19	NA	39348991	39342314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_124489.known	chr21	-	850	7	FSM	ENSG00000205581.11	ENST00000419378.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	2335.0510106253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGGCAATATGGAGTC	0	True	NA	-49	True	AATACA	-8	NA	39349040	39342787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_124490.known	chr21	-	1045	7	FSM	ENSG00000205581.11	ENST00000436324.5	1045	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	2312.40743358278	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTAACATCTTTGTGG	-1	True	NA	93	True	AAGAAA	-42	NA	39349088	39342645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39347378_39347484_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_124495.known	chr21	-	1271	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	4780	junction_5	464.507653327693	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-1	True	NA	-2	True	AATAAA	-19	NA	39349088	39342314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_124497.known	chr21	-	508	5	FSM	ENSG00000205581.11	ENST00000464078.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	4780	junction_4	465.693031942717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAGAAGCCAAGTCTG	4	True	NA	NA	False	NA	NA	NA	39349054	39343136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348578_39348902
transcript_124498.known	chr21	-	829	5	FSM	ENSG00000205581.11	ENST00000380748.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2338.58305122995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCACTCTTTGATCA	5	True	NA	47	True	TTTAAA	-45	NA	39349053	39342691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348544_39348578_39348902
transcript_124501.known	chr21	-	4299	5	FSM	ENSG00000205581.11	ENST00000486741.5	4299	5	0	0	0	0	multi-exon	FALSE	canonical	3	4780	junction_4	512.594137695702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-12	True	NA	-2	True	AATAAA	-19	NA	39349099	39342314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39348340_39348421_39348452_39348544_39348578_39348902
transcript_124505.known	chr21	+	1328	9	FSM	ENSG00000285815.1	ENST00000647779.1	1328	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	136.757026784732	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	-6	True	NA	20	True	AATAAA	-17	NA	39380331	39515506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_124506.known	chr21	+	1534	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	97.8554418517437	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	-12	True	NA	16	True	AGTAAA	-18	NA	39380325	39397889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_124510.known	chr21	+	699	5	FSM	ENSG00000182093.16	ENST00000398753.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	214.337350921392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGTCATTGAGCCAAG	-15	True	NA	NA	False	NA	NA	NA	39380457	39397116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39380557_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_124516.known	chr21	+	1464	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	143.678460459458	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	-15	True	NA	16	True	AGTAAA	-18	NA	39387764	39397889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_124518.known	chr21	+	1416	5	FSM	ENSG00000182093.16	ENST00000466787.1	1416	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	215.880030340928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATTGCCAACTGGAAA	11	True	NA	NA	False	NA	NA	NA	39387790	39397254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39387856_39390697_39391477_39391768_39391837_39393165_39393281_39396865
transcript_124520.known	chr21	+	780	7	FSM	ENSG00000185437.15	ENST00000380631.5	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	37.4477413649119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTACATGGAGGTATCT	102	False	NA	NA	False	NA	NA	NA	39445941	39515207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39446082_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_124521.known	chr21	+	1109	7	FSM	ENSG00000185437.15	ENST00000333634.10	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	13.6341075574784	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	0	True	NA	18	True	AATAAA	-15	NA	39451969	39515504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_124522.known	chr21	+	865	6	FSM	ENSG00000185437.15	ENST00000452550.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	36.05329388558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	38	False	NA	20	True	AATAAA	-17	NA	39452122	39515506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39508997_39509028_39511679_39511810_39515087
transcript_124523.known	chr21	+	1014	7	FSM	ENSG00000185437.15	ENST00000380637.7	1014	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	38.1779459315919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	15	True	NA	20	True	AATAAA	-17	NA	39445854	39515506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39445930_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_124525.known	chr21	+	1347	4	FSM	ENSG00000183778.19	ENST00000684187.2	13097	4	105	11645	0	0	multi-exon	FALSE	canonical	3	17	junction_2	8.9938250421547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGCCCAGAGGCACATC	85	False	NA	NA	False	NA	NA	NA	39613044	39661492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39613068_39646391_39646623_39659752_39659913_39660559
transcript_124529.known	chr21	+	1290	3	FSM	ENSG00000183778.19	ENST00000615480.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGGGCGGGACAGAGGA	-1	True	NA	NA	False	NA	NA	NA	39612939	39661561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39613068_39659752_39659913_39660559
transcript_124531.known	chr21	-	2340	5	FSM	ENSG00000184809.13	ENST00000670883.1	2340	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	75.6455550577825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	621	False	NA	NA	False	ATTAAA	-18	NA	39612646	39597146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39597990_39599340_39600280_39601418_39601544_39609582_39609666_39612296
transcript_124532.known	chr21	-	1919	4	FSM	ENSG00000184809.13	ENST00000489821.5	1919	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	83.1638276068521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGAACTATGAGTCAA	875	False	NA	NA	False	NA	NA	NA	39612392	39597188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39597990_39599340_39600280_39609582_39609666_39612296
transcript_124533.known	chr21	-	3846	4	FSM	ENSG00000184809.13	ENST00000670049.1	3846	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	80.0291613517639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGAGGCCTCTCCA	10	True	NA	NA	False	NA	NA	NA	39612857	39597202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39600280_39601418_39601544_39609582_39609666_39612296
transcript_124536.known	chr21	-	1071	3	FSM	ENSG00000184809.13	ENST00000380612.8	1071	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	84.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	826	False	NA	NA	False	ATTAAA	-18	NA	39612441	39597146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39597990_39609582_39609666_39612296
transcript_124538.nic	chr21	-	3804	3	NIC	ENSG00000184809.13	novel	2340	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	20	junction_1	84.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	-17	True	NA	NA	False	ATTAAA	-18	NA	39612884	39597146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_39600280_39609582_39609666_39612296
transcript_124540.nic	chr21	-	2036	3	ISM	ENSG00000184809.13	ENST00000489821.5	1919	4	-492	1726	-8	-1712	5prime_fragment	FALSE	canonical	3	20	junction_1	84.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAATCGCATGTTTTCT	-17	True	NA	-7	True	AATAAA	-16	NA	39612884	39598914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_39600280_39609582_39609666_39612296
transcript_124543.known	chr21	-	4202	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	51.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	357	False	NA	NA	False	NA	NA	NA	39612910	39602842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39606348_39609582_39609666_39612296
transcript_124545.nnic	chr21	-	1753	3	NNC	ENSG00000184809.13	novel	4202	3	NA	NA	-8	30	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	86	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTAAATGTTTGACAT	-17	True	NA	-10	True	ATTAAA	-16	NA	39612884	39604103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_39605186_39609582_39609666_39612296
transcript_124546.known	chr21	-	1823	3	FSM	ENSG00000184809.13	ENST00000380604.8	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	84	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGCGCGGT	763	False	NA	NA	False	AATACA	-1	NA	39612504	39604470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39606003_39609582_39609666_39612296
transcript_124548.known	chr21	-	3106	3	FSM	ENSG00000184809.13	ENST00000329618.7	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	87.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTATTATTAAAGTTCT	-9	True	NA	-40	True	NA	NA	NA	39612876	39604133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39606577_39609582_39609666_39612296
transcript_124567.nnic	chr21	+	2391	8	Fusion	ENSG00000183067.6_ENSG00000183778.19	novel	724	3	NA	NA	-400	15	multi-exon	FALSE	canonical	1	6	junction_1	4.80645824036021	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCACTATTCAGTTGGT	3896	False	NA	25	True	AATAAA	-31	NA	39612539	39802096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr21_+_39613068_39765534_39765853_39770915_39771216_39779089_39779306_39788166_39788189_39792007_39792100_39793533_39793614_39801261
transcript_12457.nic	chr1	+	1931	10	ISM	ENSG00000116830.12	ENST00000369466.9	9439	23	-54	25553	-54	5511	5prime_fragment	FALSE	canonical	3	194	junction_9	32.9443976016156	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAGGAGAAAAGCA	NA	False	NA	20	True	NA	NA	NA	117060271	117081900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827
transcript_124572.known	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	6	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39867511_39898475_39898528_39928983
transcript_124578.known	chr21	+	8567	9	FSM	ENSG00000182240.16	ENST00000330333.11	8567	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	5.60691537300145	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGCTTTTGGAATGTT	-2	True	NA	NA	False	AATAAA	-36	NA	41168159	41282530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41257157_41257327_41275370
transcript_124579.known	chr21	+	2824	8	FSM	ENSG00000182240.16	ENST00000328735.10	2824	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	14.8117438238055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTAGCTTAGTTGTCT	19	False	NA	21	True	AATAAA	-30	NA	41167800	41276597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41275370
transcript_12458.nic	chr1	+	2840	10	ISM	ENSG00000116830.12	ENST00000369466.9	9439	23	-1	24591	-1	6473	5prime_fragment	FALSE	canonical	3	194	junction_9	32.9443976016156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGATTGAATATGTTA	-6	True	NA	9	True	AATAAA	-22	NA	117060324	117082862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827
transcript_124581.known	chr21	+	1317	8	FSM	ENSG00000183844.17	ENST00000357985.7	1317	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.26778683805536	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCACGTCTGGCACCGG	0	True	NA	NA	False	NA	NA	NA	41316800	41357727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41316899_41322922_41323067_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_124583.known	chr21	+	3509	14	FSM	ENSG00000183486.14	ENST00000680862.1	3509	14	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_3	2.26629536348557	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTGTATGTTTCAA	302	False	NA	NA	False	NA	NA	NA	41370451	41409329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41370646_41376835_41377156_41377788_41377982_41380016_41380152_41382409_41382565_41390564_41390704_41395586_41395786_41397612_41397692_41398896_41399020_41399195_41399338_41401969_41402129_41403266_41403344_41406743_41406999_41407990
transcript_124586.known	chr21	+	2776	17	FSM	ENSG00000157601.15	ENST00000398598.8	2776	17	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	3.56195171219375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTCTGCCATGTTTTG	-1	True	NA	16	True	AATAAA	-16	NA	41426238	41459212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41426264_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_124587.known	chr21	+	3298	17	FSM	ENSG00000157601.15	ENST00000681671.1	3298	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.043560250458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAAATTAGCTGGGT	1	True	NA	NA	False	ACTAAA	-1	NA	41426294	41459637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41426398_41427205_41427305_41427754_41427867_41430532_41430609_41432030_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_124591.known	chr21	-	3945	14	FSM	ENSG00000184012.14	ENST00000679054.1	3945	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	37.6195530174239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	3953	False	NA	NA	False	AATAAA	-24	NA	41508146	41464304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507573
transcript_124592.known	chr21	-	1877	14	FSM	ENSG00000184012.14	ENST00000458356.6	1877	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	26.0093292320389	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCACTCTCTGCCATTC	-2	True	NA	-6	True	ATTAAA	-18	NA	41508158	41466008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507949
transcript_124593.known	chr21	-	3446	14	FSM	ENSG00000184012.14	ENST00000678171.1	3446	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	40.4025601157318	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-2	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466150_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_124595.nic	chr21	-	3157	14	NIC	ENSG00000184012.14	novel	3240	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	37.6747211719558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	-11	True	NA	0	True	AATAAA	-24	NA	41508106	41464552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494479_41494579_41498118_41498190_41507949
transcript_124596.known	chr21	-	3326	14	FSM	ENSG00000184012.14	ENST00000678959.1	3326	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	40.1026788640236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-2	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494479_41494579_41498118_41498190_41508080
transcript_124599.nic	chr21	-	3110	13	NIC	ENSG00000184012.14	novel	3240	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	38.5193854514263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	-2	True	NA	0	True	AATAAA	-24	NA	41508158	41464552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41498118_41498190_41507949
transcript_12460.nic	chr1	+	3241	10	ISM	ENSG00000116830.12	ENST00000369466.9	9439	23	-1	24190	-1	6874	5prime_fragment	FALSE	canonical	3	194	junction_9	32.9443976016156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGCATCTGCTCTCAG	-6	True	NA	NA	False	NA	NA	NA	117060324	117083263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827
transcript_124600.nic	chr21	-	3006	13	NIC	ENSG00000184012.14	novel	3450	14	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	41.1346028977497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	3914	False	NA	0	True	AATAAA	-24	NA	41508185	41464552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41498118_41498190_41508080
transcript_124603.nic	chr21	-	3213	13	NIC	ENSG00000184012.14	novel	3240	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	35.7479603147741	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	-2	True	NA	0	True	AATAAA	-24	NA	41508158	41464552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41489506_41489594_41494355_41494579_41498118_41498190_41507949
transcript_124604.known	chr21	-	1427	13	FSM	ENSG00000184012.14	ENST00000424093.6	1427	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	38.5856730752059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACATGGTCTTCGTCCTT	3	True	NA	NA	False	AAGAAA	-45	NA	41508092	41466141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_124609.nnic	chr21	-	2992	12	NIC	ENSG00000184012.14	novel	3240	14	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_11	38.3306622617127	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	-16	True	NA	0	True	AATAAA	-24	NA	41508111	41464552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41507949
transcript_124610.known	chr21	-	3156	12	FSM	ENSG00000184012.14	ENST00000678743.1	3156	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	38.3306622617127	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-2	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41508080
transcript_124616.nic	chr21	-	2836	11	NIC	ENSG00000184012.14	novel	3156	12	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	47.3160649251393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	3893	False	NA	0	True	AATAAA	-24	NA	41508206	41464552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41489506_41489594_41508080
transcript_124619.nnic	chr21	-	2489	8	NNC	ENSG00000184012.14	novel	3240	14	NA	NA	-9182	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	45.9889072694355	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	NA	False	NA	0	True	AATAAA	-24	NA	41478019	41464552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41477915
transcript_124629.nnic	chr21	-	1676	5	NNC	ENSG00000236384.7	novel	718	7	NA	NA	-586	59	intron_retention	FALSE	canonical	3	39	junction_1	38.0197317192008	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714641	41711460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_41712045_41712815_41713001_41713550_41713937_41714019_41714133_41714233
transcript_124633.nic	chr21	-	2005	5	NIC	ENSG00000236384.7	novel	718	7	NA	NA	-586	59	intron_retention	FALSE	canonical	3	42	junction_1	37.4257598453258	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714641	41711460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41712374_41712815_41713001_41713550_41713937_41714019_41714133_41714233
transcript_124637.nnic	chr21	-	1290	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-586	59	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	41.3628926562068	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714641	41711460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_41712045_41712815_41713001_41714019_41714133_41714233
transcript_124639.nnic	chr21	-	1619	4	NIC	ENSG00000236384.7	novel	560	4	NA	NA	-586	59	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	40.4749579644281	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714641	41711460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41712374_41712815_41713001_41714019_41714133_41714233
transcript_124643.nic	chr21	-	2445	4	NIC	ENSG00000236384.7	novel	718	7	NA	NA	-586	57	intron_retention	FALSE	canonical	3	44	junction_2	38.7327022323801	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATAGATGTATTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	41714641	41711462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41713001_41713550_41713937_41714019_41714133_41714233
transcript_124647.nic	chr21	-	2528	3	NIC	ENSG00000236384.7	novel	2033	6	NA	NA	-586	57	intron_retention	FALSE	canonical	3	63	junction_1	35.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATAGATGTATTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	41714641	41711462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41713001_41713550_41714133_41714233
transcript_124648.nic	chr21	-	3080	2	NIC	ENSG00000236384.7	novel	2033	6	NA	NA	-586	59	intron_retention	FALSE	canonical	3	134	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714641	41711460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41714133_41714233
transcript_124651.known	chr21	-	3831	8	FSM	ENSG00000183421.12	ENST00000332512.8	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	9.52333332142798	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTGAGACTGCTTTTT	-2	True	NA	-6	True	AATAAA	-27	NA	41767052	41739372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41741998_41743881_41744141_41745758_41745863_41746612_41746772_41749153_41749204_41751096_41751246_41756524_41756817_41766859
transcript_124653.known	chr21	-	6714	25	FSM	ENSG00000141956.14	ENST00000422911.6	6714	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	9.08973398339516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCTTCTGCTCCCG	NA	False	NA	-8	True	AATAAA	-25	NA	41879473	41798224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41801723_41802711_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581_41819702_41820094_41820175_41821066_41821231_41821902_41822038_41823317_41823450_41825959_41826055_41828165_41828334_41834504_41834565_41835436_41835525_41836112_41836208_41836467_41836650_41837933_41838064_41839622_41839854_41847089_41847192_41854565_41854819_41857175_41857330_41859591_41859686_41860326_41860373_41879269
transcript_124654.known	chr21	-	6525	24	FSM	ENSG00000141956.14	ENST00000398548.6	6525	24	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_20	6.2375774464736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCTTCTGCTCCCG	-20	True	NA	-8	True	AATAAA	-25	NA	41879344	41798224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41801723_41802711_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581_41819702_41820094_41820175_41821066_41821231_41821902_41822038_41823317_41823450_41825959_41826055_41828165_41828334_41835436_41835525_41836112_41836208_41836467_41836650_41837933_41838064_41839622_41839854_41847089_41847192_41854565_41854819_41857175_41857330_41859591_41859686_41860326_41860373_41879269
transcript_124656.known	chr21	-	6473	14	FSM	ENSG00000157617.17	ENST00000380486.4	6473	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	9.67581013533998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAGTTGTTTTTCCCGA	-6	True	NA	-6	True	AATAAA	-19	NA	41954018	41885111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41889345_41899052_41899363_41901621_41901750_41905723_41905838_41906991_41907167_41907659_41907785_41909458_41909524_41912331_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146_41942246_41953369
transcript_12466.known	chr1	+	849	5	FSM	ENSG00000116830.12	ENST00000470935.1	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	115.4585964751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGAGGCTAAAGAAACAA	3	True	NA	NA	False	NA	NA	NA	117060361	117075444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_117060375_117060454_117060562_117062386_117062474_117073660_117073728_117074869
transcript_124660.nic	chr21	-	2266	7	ISM	ENSG00000157617.17	ENST00000380486.4	6473	14	0	26277	0	771	5prime_fragment	FALSE	canonical	3	37	junction_6	11.3932241071417	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCGAGATAGGGAAAAAT	-6	True	NA	NA	False	NA	NA	NA	41954018	41911388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146_41942246_41953369
transcript_124661.nic	chr21	-	1967	7	ISM	ENSG00000157617.17	ENST00000380486.4	6473	14	0	26576	0	472	5prime_fragment	FALSE	canonical	3	37	junction_6	11.3932241071417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGGAACAGTAGCTCAC	-6	True	NA	NA	False	AAAAAG	-8	NA	41954018	41911687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146_41942246_41953369
transcript_124664.known	chr21	-	356	2	FSM	ENSG00000157617.17	ENST00000478372.1	356	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTATCTCCAAAGAC	493	False	NA	NA	False	NA	NA	NA	41953519	41952945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41953152_41953369
transcript_124666.known	chr21	-	5608	2	FSM	ENSG00000173276.14	ENST00000398511.3	5608	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATAATGCCGTTCTGGTT	NA	False	NA	-5	True	AATAAA	-18	NA	42010387	41988636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41994109_42010251
transcript_124669.known	chr21	+	2976	15	FSM	ENSG00000160179.19	ENST00000398449.8	2976	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	5.47955383257448	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACCTTTAATT	4	True	NA	31	True	AATATA	-19	NA	42219139	42297244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288038_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
transcript_124670.known	chr21	+	3034	15	FSM	ENSG00000160179.19	ENST00000361802.6	3034	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	5.47955383257448	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACCTTTAATT	-18	True	NA	31	True	AATATA	-19	NA	42219117	42297244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288074_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
transcript_124673.known	chr21	-	867	3	FSM	ENSG00000160180.17	ENST00000518498.3	867	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGTATTTGTTTGCT	-1	True	NA	NA	False	AGTAAA	-20	NA	42315409	42311666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42312270_42313484_42313632_42315292
transcript_124674.known	chr21	-	419	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTGAGGTTGTGCTT	-7	True	NA	-5	True	AATAAA	-40	NA	42313686	42312052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42312270_42313484
transcript_124675.known	chr21	-	492	3	FSM	ENSG00000160182.3	ENST00000291527.3	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCTGTTCATTCTTTT	-2	True	NA	-1	True	ATTAAA	-16	NA	42366535	42362281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42362496_42363254_42363408_42366410
transcript_124679.nic	chr21	+	3176	22	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	57.1016518102216	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513747	42581426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42513925_42514630_42514718_42514869_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_124682.nic	chr21	+	3110	21	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	53.8283150395775	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513747	42581426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42513925_42514630_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_124683.nnic	chr21	+	3069	21	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	56.872203227939	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513767	42581426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42513925_42514869_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_124687.nnic	chr21	+	3036	20	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-117	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	48.3923255745706	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513734	42581426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42513925_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_124691.known	chr21	+	3712	20	FSM	ENSG00000160190.14	ENST00000352133.3	3712	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.205781525786	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	-18	True	NA	6	True	AATAAA	-19	NA	42513851	42581426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_124692.nic	chr21	+	2970	20	NIC	ENSG00000160190.14	novel	481	5	NA	NA	288	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	48.8696610108257	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	72	False	NA	6	True	AATAAA	-19	NA	42514811	42581426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_12470.nic	chr1	-	2683	7	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	19	junction_1	39.2573418469576	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	NA	False	NA	-19	True	AATAAA	-22	NA	117121778	117111059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_117111213_117112094_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_124700.nnic	chr21	+	2871	19	NNC	ENSG00000160190.14	novel	481	5	NA	NA	10397	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.1022408883015	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42524920	42581426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_+_42525180_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_12471.nic	chr1	-	2835	7	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	-3	0	intron_retention	FALSE	canonical	2	10	junction_6	42.3425186885344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-26	True	NA	-19	True	AATAAA	-22	NA	117121752	117111059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_124716.known	chr21	+	617	4	FSM	ENSG00000160190.14	ENST00000471277.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	84.8528137423857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTTATACTTTCAG	22	True	NA	NA	False	ATTAAA	-15	NA	42513891	42526038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42513925_42514630_42514718_42518276_42518511_42525775
transcript_124721.known	chr21	+	3094	21	FSM	ENSG00000160190.14	ENST00000398341.7	3094	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	63.8085221580942	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTTGATGATTTCTG	6	True	NA	20	True	AATAAA	-33	NA	42499631	42581440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42499744_42502295_42502418_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_124736.known	chr21	+	2192	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	46.9269485919884	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	11	True	NA	21	True	AATATA	-15	NA	42653620	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_12474.nic	chr1	-	1710	7	NIC	ENSG00000134253.10	novel	2415	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	42.3425186885344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTTCAAGTGCTCTTT	-26	True	NA	-9	True	ATTAAA	-22	NA	117121752	117112184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_124741.known	chr21	+	1883	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	46.3276042287991	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	140	False	NA	21	True	AATATA	-15	NA	42653749	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124746.known	chr21	+	1956	19	FSM	ENSG00000160191.18	ENST00000328862.10	1956	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	71.8109013698864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124748.known	chr21	+	1963	19	FSM	ENSG00000160191.18	ENST00000398225.7	1963	19	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	71.0502560789818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124752.known	chr21	+	1776	18	FSM	ENSG00000160191.18	ENST00000398236.7	1776	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	73.0644593828867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124754.known	chr21	+	1885	18	FSM	ENSG00000160191.18	ENST00000398232.7	1885	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6687187543458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124756.known	chr21	+	1783	18	FSM	ENSG00000160191.18	ENST00000398234.7	1783	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	72.3980251694955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124761.known	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	66.5708914898246	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	1	True	NA	21	True	AATATA	-15	NA	42653812	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124764.known	chr21	+	1616	16	FSM	ENSG00000160191.18	ENST00000349112.7	1616	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	83.2806233299332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	1	True	NA	21	True	AATATA	-15	NA	42653812	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42698967_42699012_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124766.known	chr21	+	1661	16	FSM	ENSG00000160191.18	ENST00000467403.5	1661	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	68.1397257275242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_124768.known	chr21	+	1606	15	FSM	ENSG00000160191.18	ENST00000398227.7	1606	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.474877847152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_12477.known	chr1	-	3536	6	FSM	ENSG00000134253.10	ENST00000256649.9	3536	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	17.5202739704606	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-23	True	NA	-19	True	AATAAA	-22	NA	117121749	117111059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_124776.known	chr21	+	794	5	FSM	ENSG00000160191.18	ENST00000486902.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	81.7324140105992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	-1	True	NA	9	True	AATAAA	-11	NA	42653778	42701189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700693
transcript_12478.known	chr1	-	3495	6	FSM	ENSG00000134253.10	ENST00000369464.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	44.1062353868475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	NA	False	NA	-19	True	AATAAA	-22	NA	117121762	117111059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118087_117118768_117120713
transcript_124781.known	chr21	-	1471	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	42.7274661504326	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	13	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_124789.known	chr21	-	2106	11	FSM	ENSG00000160193.12	ENST00000398208.3	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	37.9204430353866	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	5	True	NA	-2	True	AATATA	-14	NA	42879539	42849225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_124791.nnic	chr21	-	1249	10	NIC	ENSG00000160193.12	novel	1471	12	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_7	83.0675762390009	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	-1	True	NA	-28	True	AGTAAA	-15	NA	42879579	42843093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42873550_42873692_42876701_42876768_42879406
transcript_124797.known	chr21	+	5725	4	FSM	ENSG00000160194.18	ENST00000354250.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	352.193444320337	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATATGCTAGGCACTAT	2	True	NA	3	True	AATAAA	-17	NA	42893308	42913299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42893382_42896926_42897048_42903181_42904277_42908863
transcript_124799.nic	chr21	+	917	3	ISM	ENSG00000160194.18	ENST00000354250.7	5725	4	-68	9463	-27	-95	5prime_fragment	FALSE	canonical	3	96	junction_2	382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAGATAAAGAAAGCC	NA	False	NA	NA	False	ATTAAA	-1	NA	42893240	42903836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_42893382_42896926_42897048_42903181
transcript_124800.known	chr21	+	4676	3	FSM	ENSG00000160194.18	ENST00000340344.4	4676	3	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_2	80.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAGGCACTATGCCTC	-4	True	NA	8	True	AATAAA	-22	NA	42893267	42913304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42893382_42896926_42897048_42908863
transcript_124802.known	chr21	-	2790	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	143	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTCATGTTGTCTGT	170	False	NA	-9	True	ATTAAA	-17	NA	42925646	42916802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42919292_42925345
transcript_124803.known	chr21	+	5300	11	FSM	ENSG00000160199.15	ENST00000291547.10	5300	11	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	37.5201279315516	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	-20	True	NA	NA	False	NA	NA	NA	42974561	43033931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_124808.nic	chr21	+	1186	10	ISM	ENSG00000160199.15	ENST00000291547.10	5300	11	-21	5150	6	0	5prime_fragment	FALSE	canonical	3	179	junction_6	38.54578806793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAGAACCGGCCAGTT	-41	True	NA	NA	False	AAGAAA	-5	NA	42974540	43028781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701
transcript_124809.known	chr21	+	5180	10	FSM	ENSG00000160199.15	ENST00000432907.6	5180	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	69.1366512293579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	8073	False	NA	NA	False	NA	NA	NA	42974509	43033931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_124810.known	chr21	+	1725	6	FSM	ENSG00000160199.15	ENST00000480179.1	1725	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	44.231210700138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	22	False	NA	NA	False	NA	NA	NA	42974661	43018051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907
transcript_12482.known	chr1	+	8576	13	FSM	ENSG00000198162.12	ENST00000356554.7	8576	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	6.88547182277455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTTTAGCCTTCATT	-19	True	NA	14	True	AATAAA	-20	NA	117367448	117528872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_117368486_117402185_117402442_117405548_117405646_117414712_117414832_117420568_117420650_117442230_117442326_117460488_117460613_117466333_117466428_117493146_117493263_117496762_117496983_117499381_117499555_117502854_117502971_117522824
transcript_12483.nic	chr1	+	1783	2	ISM	ENSG00000198162.12	ENST00000356554.7	8576	13	-623	126564	-623	-18322	5prime_fragment	FALSE	canonical	3	70	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTAGTCCAAGAAATGA	-7	True	NA	-88	True	AAGAAA	-43	NA	117366825	117402308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117368486_117402185
transcript_12484.nic	chr1	+	2054	2	ISM	ENSG00000198162.12	ENST00000356554.7	8576	13	-769	126439	-769	-18197	5prime_fragment	FALSE	canonical	3	70	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAGGTAATAAGCTGA	NA	False	NA	37	True	NA	NA	NA	117366679	117402433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117368486_117402185
transcript_124862.nic	chr21	-	2393	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	485.433676902706	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	983	False	NA	NA	False	TATAAA	-14	NA	43075947	43053190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_12488.known	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	12.4933118201975	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-5	True	NA	-8	True	AGTAAA	-16	NA	117929621	117863484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_124939.known	chr21	-	2453	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_16	624.83389980358	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-5	True	NA	NA	False	TATAAA	-14	NA	43075831	43053190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
transcript_124944.known	chr21	-	2495	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_10	325.332137975946	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-9	True	NA	NA	False	TATAAA	-14	NA	43075835	43053190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_124945.known	chr21	-	2583	17	FSM	ENSG00000160200.18	ENST00000352178.9	2583	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_16	651.326866864864	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-2	True	NA	NA	False	TATAAA	-14	NA	43076378	43053190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
transcript_12495.known	chr1	+	10004	27	FSM	ENSG00000065183.16	ENST00000349139.6	10004	27	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_1	56.6259527134869	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCACTCGTGTAA	-23	True	NA	9	True	AATAAA	-24	NA	117929738	117966543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_12498.nic	chr1	+	3337	27	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	-17	-6790	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	57.5892412700425	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATTGG	-4	True	NA	10	True	AATAAA	-13	NA	117929757	117959753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_12499.nic	chr1	+	3644	27	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	-17	-6483	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	57.5892412700425	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCAAGCTAAGATGCCT	-4	True	NA	14	True	AATAAA	-22	NA	117929757	117960060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_125072.known	chr21	-	2656	14	FSM	ENSG00000160200.18	ENST00000461686.5	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_13	693.839246085348	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	8526	False	NA	NA	False	TATAAA	-14	NA	43068404	43053190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43067777
transcript_125084.known	chr21	-	945	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	4090	junction_6	882.814469611312	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	24	False	43107594	NA	False	AATAAA	-20	NA	43107570	43092955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
transcript_125085.known	chr21	-	940	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	2282	junction_5	1691.04056843165	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-21	True	NA	NA	False	AATAAA	-20	NA	43107565	43092955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
transcript_125086.known	chr21	-	4694	7	FSM	ENSG00000160201.12	ENST00000475639.5	4694	7	0	0	0	0	multi-exon	FALSE	canonical	3	4554	junction_5	679.297369836412	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	20	True	NA	NA	False	AATAAA	-20	NA	43107524	43092955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43104403_43107450
transcript_125087.known	chr21	-	966	9	FSM	ENSG00000160201.12	ENST00000464750.5	966	9	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_6	2061.585126638	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	20	True	NA	NA	False	AATAAA	-20	NA	43107524	43092955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43107450
transcript_125088.known	chr21	-	4747	14	FSM	ENSG00000142178.9	ENST00000270162.8	4747	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.33175505041657	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGAGCTCTTTCCTT	-3	True	NA	NA	False	NA	NA	NA	43427131	43414482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43417118_43417542_43417775_43418259_43418542_43419020_43419238_43419352_43419479_43419858_43420006_43420233_43420458_43421009_43421134_43421242_43421368_43421637_43421800_43421973_43422038_43425406_43425524_43426022_43426193_43427009
transcript_12509.nic	chr1	+	1755	9	ISM	ENSG00000065183.16	ENST00000349139.6	10004	27	-749	24755	-730	0	5prime_fragment	FALSE	canonical	3	176	junction_1	79.9201750185771	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAATTCAGAAGAA	NA	False	NA	-9	True	NA	NA	NA	117928989	117941788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749
transcript_125090.known	chr21	-	1900	9	FSM	ENSG00000160207.9	ENST00000291560.7	1900	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	2.39791576165636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGCTGTCTAAAATCTA	1	True	NA	NA	False	AATAAA	-26	NA	43659488	43529185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43529963_43592224_43592329_43613829_43613948_43630321_43630455_43633271_43633422_43644288_43644393_43656586_43656738_43658060_43658321_43659385
transcript_125093.nnic	chr21	-	1695	7	NIC	ENSG00000160207.9	novel	1900	9	NA	NA	-28	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.93347457373532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTACGACCCTTGCTG	-27	True	NA	NA	False	AATAAA	-15	NA	43659516	43529196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_43529963_43630321_43630455_43633271_43633422_43644288_43644393_43656586_43656738_43658060_43658321_43659385
transcript_125094.known	chr21	+	5078	16	FSM	ENSG00000160208.13	ENST00000340648.6	5078	16	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_9	38.4757354994316	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGATGTTGACTT	10	True	NA	34	True	ATTAAA	-23	NA	43659559	43696079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515_43688241_43690287_43690441_43691438_43691503_43693189
transcript_125099.nic	chr21	+	1333	13	ISM	ENSG00000160208.13	ENST00000340648.6	5078	16	-35	8512	-35	-8510	5prime_fragment	FALSE	canonical	3	373	junction_9	38.821886725002	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGGAAGAAGAAGA	NA	False	NA	34	True	NA	NA	NA	43659524	43687567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515
transcript_12510.nic	chr1	+	1129	9	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	82.0106700375018	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAATTCAGAAGAA	-4	True	NA	-9	True	NA	NA	NA	117929757	117941788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749
transcript_125100.nic	chr21	+	1924	13	ISM	ENSG00000160208.13	ENST00000340648.6	5078	16	-35	7921	-35	-7919	5prime_fragment	FALSE	canonical	3	373	junction_9	38.821886725002	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAAATGAGAGTGA	NA	False	NA	NA	False	AAAACA	-15	NA	43659524	43688158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515
transcript_125101.nic	chr21	+	1238	12	ISM	ENSG00000160208.13	ENST00000340648.6	5078	16	-35	9187	-35	-9185	5prime_fragment	TRUE	canonical	3	373	junction_9	39.9609313337146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAACTTTTAGAGAA	NA	False	NA	NA	False	AAGAAA	-1	NA	43659524	43686892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803
transcript_125115.known	chr21	+	7341	11	FSM	ENSG00000160209.19	ENST00000291565.9	7341	11	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_8	54.8343870212844	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGAGGCATGATGGTT	-3	True	NA	10	True	AATAAA	-16	NA	43719128	43762299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43719382_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_125123.known	chr21	+	7297	10	FSM	ENSG00000160209.19	ENST00000468090.5	7297	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	191.10206696946	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGATGGTTCCTTCCCA	-35	True	NA	18	True	AATAAA	-24	NA	43719096	43762307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43719382_43734068_43734124_43741666_43741772_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_125134.known	chr21	+	602	2	FSM	ENSG00000160209.19	ENST00000476084.1	602	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCGCTTTCACAGGG	45	True	NA	NA	False	NA	NA	NA	43719176	43723893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43719382_43723496
transcript_125135.known	chr21	+	2251	3	FSM	ENSG00000160209.19	ENST00000398081.5	2251	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	309.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGCCTTTTGCAGCC	-38	True	NA	4	True	AATAAA	-17	NA	43719093	43738861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43719382_43734068_43734124_43736953
transcript_125136.known	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_2	2	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	14	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43774331_43774657_43774760_43776203
transcript_125137.known	chr21	-	1855	2	FSM	ENSG00000160213.9	ENST00000639959.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTCTGGTTTAAATA	348	False	NA	-6	True	AATAAA	-14	NA	43776238	43772510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43774331_43776203
transcript_125138.known	chr21	-	2354	2	FSM	ENSG00000160213.9	ENST00000640406.1	2354	2	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTAATGCTGTGGTCT	4	True	NA	-16	True	AATAAA	-4	NA	43776318	43772520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43774760_43776203
transcript_12515.known	chr1	-	2787	6	FSM	ENSG00000116874.12	ENST00000235521.5	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	15.72768260107	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-2	True	NA	-1	True	ACTAAA	-20	NA	119140653	119031215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_125161.known	chr21	+	2958	13	FSM	ENSG00000160214.13	ENST00000497547.2	2958	13	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_12	36.387860460446	2734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCGTGTCTAACGTAA	22	True	NA	NA	False	NA	NA	NA	43789576	43805293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
transcript_12517.known	chr1	-	2811	6	FSM	ENSG00000116874.12	ENST00000369426.9	2811	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	37.1591173199795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	3	True	NA	-1	True	ACTAAA	-20	NA	119140648	119031215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_119033389_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_125174.nic	chr21	+	2937	12	ISM	ENSG00000160214.13	ENST00000497547.2	2958	13	-49	1194	15	-1194	intron_retention	FALSE	canonical	3	463	junction_11	32.7164123394304	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAAGTGTCGCTTCAGGT	-27	True	NA	20	True	AATAAA	-21	NA	43789527	43804099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273
transcript_125215.known	chr21	+	6565	10	FSM	ENSG00000160216.21	ENST00000291572.13	6565	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	10.3649456711279	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCCGAGTTCTCGTTT	4	True	NA	NA	False	ATTAAA	-33	NA	43865222	43987592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43865346_43903956_43904020_43959633_43959860_43967945_43968116_43969117_43969280_43970652_43970807_43971387_43971491_43978045_43978122_43980988_43981188_43982303
transcript_125231.known	chr21	+	3188	21	FSM	ENSG00000241945.8	ENST00000291576.12	3188	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	106.521875687579	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	7	True	NA	NA	False	ATTAAA	-16	NA	44107398	44131181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579_44124728_44126010_44126120_44126899_44126966_44127931_44128151_44128246_44128398_44128551_44128627_44130596
transcript_125232.known	chr21	+	1584	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	241.03227077625	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	7	True	NA	NA	False	AATAAA	-17	NA	44133682	44145711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
transcript_125233.known	chr21	-	7080	7	FSM	ENSG00000160223.17	ENST00000407780.7	7080	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	4.46280927966529	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCATTATCTGTTTAGG	-6	True	NA	NA	False	AATAAA	-25	NA	44240945	44222990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44229045_44230053_44230090_44231279_44231445_44235271_44235563_44236866_44237218_44238447_44238489_44240803
transcript_125234.known	chr21	+	2690	14	FSM	ENSG00000160224.17	ENST00000291582.6	2690	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.91293788134792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTTAATTTTTTGA	-1	True	NA	10	True	AGTAAA	-21	NA	44285875	44298648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44286139_44286556_44286732_44286977_44287134_44287516_44287592_44288344_44288459_44289656_44289803_44289987_44290069_44291094_44291211_44292301_44292402_44292992_44293176_44293788_44293911_44294400_44294504_44296382_44296446_44297655
transcript_125236.known	chr21	+	4306	12	FSM	ENSG00000160224.17	ENST00000530812.5	4306	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.60958183534679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTTAATTTTTTGA	13	False	NA	10	True	AGTAAA	-21	NA	44285837	44298648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44286139_44286556_44286732_44286977_44287592_44288344_44289803_44289987_44290069_44291097_44291211_44292301_44292402_44292992_44293176_44293788_44293911_44294400_44294504_44296382_44296446_44297655
transcript_125239.known	chr21	+	3390	25	FSM	ENSG00000141959.17	ENST00000397961.6	3390	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	410.321975116967	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCAGAACTCCTCAG	-19	True	NA	39	True	AATAAA	-40	NA	44300050	44327376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44300191_44304274_44304456_44305256_44305418_44305799_44305936_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
transcript_12526.known	chr1	+	745	4	FSM	ENSG00000231365.7	ENST00000425884.6	1227	4	0	482	0	-482	multi-exon	FALSE	canonical	3	5	junction_3	3.2659863237109	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAATAC	-6	True	NA	NA	False	NA	NA	NA	119140395	119150934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119140794_119146952_119147070_119150564_119150653_119150792
transcript_125263.known	chr21	+	2907	22	FSM	ENSG00000141959.17	ENST00000349048.9	2907	22	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_12	61.8302481948499	2335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCCTGCAGAACTCCT	-17	True	NA	36	True	AATAAA	-37	NA	44300052	44327373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
transcript_12528.known	chr1	+	540	2	FSM	ENSG00000231365.7	ENST00000457043.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTACTGAGACCCTGG	198	False	NA	NA	False	AATAAA	-34	NA	119140707	119142200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119140794_119141746
transcript_125334.known	chr21	-	1191	8	FSM	ENSG00000160226.16	ENST00000496321.5	1191	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	65.3780216455478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	7992	False	NA	-25	True	AATAAA	-17	NA	44338338	44329890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333254_44335757_44335805_44336823_44336921_44337648_44337668_44338233
transcript_125340.known	chr21	-	1634	7	FSM	ENSG00000160226.16	ENST00000397956.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	56.8262458923887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-2	True	NA	-25	True	AATAAA	-17	NA	44339393	44329890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44330327_44330462_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_125347.known	chr21	-	1283	7	FSM	ENSG00000160226.16	ENST00000325223.7	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	34.9650619269515	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-11	True	NA	-25	True	AATAAA	-17	NA	44339402	44329890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_12535.known	chr1	+	1638	10	FSM	ENSG00000092621.13	ENST00000641115.1	1638	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_8	753.295934830461	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	4	False	NA	15	True	AATAAA	-15	NA	119711897	119744215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119742806_119743045_119743885
transcript_125354.known	chr21	-	2221	7	FSM	ENSG00000160226.16	ENST00000339818.9	2221	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	22.5813344748858	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTCGTTTTAAATTGAG	1	True	NA	-1	True	AGTAAA	-19	NA	44339390	44328943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_12536.known	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	94.1544361739779	4952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	-3	True	NA	15	True	AATAAA	-15	NA	119711933	119744215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_125362.nnic	chr21	-	1274	6	NIC	ENSG00000160226.16	novel	1283	7	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	53.8590753726798	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	6893	False	NA	-25	True	AATAAA	-17	NA	44339437	44329890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44337648_44337668_44339117
transcript_12537.known	chr1	+	2794	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	97.7235386178786	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	7	False	NA	1	True	AATAAA	-1	NA	119711900	119744201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
transcript_12538.known	chr1	+	1780	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	723.042626682549	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTCTGCACTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	119711885	119744212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
transcript_125380.known	chr21	+	5989	33	FSM	ENSG00000142185.18	ENST00000300482.9	5989	33	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	5.13328217980465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCACCCCATCAGCGT	-2	True	NA	NA	False	NA	NA	NA	44350162	44443081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44350276_44353600_44353866_44354647_44354737_44364113_44364283_44366753_44366935_44369176_44369344_44375832_44376014_44377711_44377774_44378996_44379198_44382717_44382821_44390903_44391026_44391271_44391626_44395413_44395552_44397746_44397877_44399295_44399442_44400258_44400372_44401680_44401898_44405141_44405261_44405904_44406038_44406593_44406766_44413890_44414075_44417926_44418109_44418422_44418556_44423644_44423733_44424851_44424940_44425669_44425828_44426659_44426737_44427009_44427112_44435130_44435218_44437061_44437168_44439066_44439169_44440788_44440906_44441691
transcript_125382.known	chr21	+	5228	28	FSM	ENSG00000142185.18	ENST00000498430.5	5228	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.10412834872658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCACCCCATCAGCGT	-3	True	NA	NA	False	NA	NA	NA	44369120	44443081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44369344_44375832_44376014_44377711_44377774_44378996_44379198_44382717_44382821_44390903_44391026_44391271_44391626_44395413_44395552_44397746_44397877_44399295_44399442_44400258_44400372_44401680_44401898_44405141_44405261_44405904_44406038_44406593_44406766_44413890_44414075_44417926_44418109_44418422_44418556_44423644_44423733_44424851_44424940_44425669_44425828_44426659_44426737_44427009_44427112_44435130_44435218_44437061_44437168_44439066_44439169_44440788_44440906_44441691
transcript_125384.known	chr21	+	5845	2	FSM	ENSG00000160233.8	ENST00000291592.6	5845	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTGGATTCTGTCGT	5	True	NA	28	True	AGTAAA	-20	NA	44455509	44462196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44455656_44456497
transcript_12539.known	chr1	+	1774	12	FSM	ENSG00000092621.13	ENST00000641947.1	1774	12	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_10	691.400208225225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATCAATAGGGAGAGAA	NA	False	NA	NA	False	AAGAAA	-10	NA	119711883	119744094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741877_119742806_119743045_119743885
transcript_12540.known	chr1	+	1180	5	FSM	ENSG00000092621.13	ENST00000641573.1	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	93.5748363610645	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	-2	True	NA	NA	False	ACTAAA	-17	NA	119711934	119727684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003
transcript_125405.known	chr21	-	721	7	FSM	ENSG00000184787.19	ENST00000330942.9	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	258.687982369151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGTACCAAACAAGGCA	4	True	NA	-62	True	NA	NA	NA	44801774	44771294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_125408.known	chr21	-	744	7	FSM	ENSG00000184787.19	ENST00000491513.5	744	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	274.463517106049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACTTGCAAGAACCAT	-1	True	NA	-46	True	NA	NA	NA	44801823	44771278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44779143_44779217_44787919_44787966_44788059_44788096_44801705
transcript_12541.known	chr1	+	2053	13	FSM	ENSG00000092621.13	ENST00000641213.1	2053	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	897.109974058675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	NA	False	NA	1	True	AATAAA	-1	NA	119711883	119744201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119724318_119724470_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_125412.known	chr21	-	3367	6	FSM	ENSG00000184787.19	ENST00000345496.7	3367	6	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_2	50.9996078416295	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTTCTGTTTTGGT	2	True	NA	1	True	AATAAA	-24	NA	44801820	44768579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801705
transcript_12542.nic	chr1	-	4084	15	ISM	ENSG00000134250.21	ENST00000256646.7	11425	34	-5	37827	-5	740	5prime_fragment	TRUE	canonical	3	63	junction_2	8.90568495343261	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTGTAGGGAAACTAC	-7	True	NA	NA	False	AAAAAG	-4	NA	120069667	119949379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_119950838_119953542_119953689_119955039_119955233_119959391_119959503_119963573_119963808_119965452_119965567_119966375_119966490_119967432_119967622_119968076_119968233_119969510_119969745_119986959_119987083_119996996_119997333_120005328_120005589_120029905_120029988_120069333
transcript_125422.known	chr21	-	424	5	FSM	ENSG00000184787.19	ENST00000490450.5	424	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	284.091864543848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAATATTATCAGCCAC	5142	False	NA	NA	False	NA	NA	NA	44801768	44777253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_125423.known	chr21	-	933	4	FSM	ENSG00000184787.19	ENST00000497630.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	251.384168157026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTGGTTCCCTGTGG	3	True	NA	NA	False	NA	NA	NA	44801819	44770930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44801705
transcript_125427.known	chr21	-	762	4	FSM	ENSG00000184787.19	ENST00000462569.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	33.4896335536171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	-1	True	NA	NA	False	TATAAA	-19	NA	44801801	44776833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801705
transcript_125429.known	chr21	-	1512	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGTTTCCCCATC	-8	True	NA	NA	False	AATAAA	-18	NA	44801808	44799989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44801399_44801705
transcript_125430.known	chr21	-	1740	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_3	64.3238334954903	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	8	True	NA	-38	True	AGTAAA	-20	NA	44818062	44805616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
transcript_125432.known	chr21	-	520	4	FSM	ENSG00000184900.16	ENST00000397893.3	520	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	605.620526585933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCTGGGATTAAAGGC	172	False	NA	NA	False	NA	NA	NA	44817968	44808270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44808569_44809046_44809119_44813975_44814105_44817947
transcript_125435.known	chr21	-	753	2	FSM	ENSG00000184900.16	ENST00000466861.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAAGAAAGCGCGTGAT	35	False	NA	NA	False	NA	NA	NA	44818105	44813509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44814105_44817947
transcript_125436.known	chr21	-	1779	4	FSM	ENSG00000184900.16	ENST00000397898.7	1779	4	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	581.719481842886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	19	True	NA	-38	True	AGTAAA	-20	NA	44818051	44805616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44807041_44808996_44809119_44813975_44814105_44817947
transcript_12544.known	chr1	-	6927	5	FSM	ENSG00000265808.4	ENST00000578049.4	6927	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	16.9115345252878	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGGTCCCCTTCTGTT	-25	True	NA	NA	False	TATAAA	-40	NA	120176520	120150897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_120157193_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_125443.known	chr21	-	2600	6	FSM	ENSG00000183255.12	ENST00000330938.8	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	16.6324983090334	1986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTAGTATGCTGCG	8	True	NA	-15	True	AATAAA	-16	NA	44873690	44849597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44851628_44855209_44855257_44856192_44856365_44861162_44861272_44865394_44865448_44873501
transcript_125453.known	chr21	-	2413	4	FSM	ENSG00000183255.12	ENST00000397887.7	2413	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	503.751923073252	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCGTGTTCCTGTGTTC	-11	True	NA	-2	True	AATAAA	-29	NA	44873709	44849584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44851628_44861162_44861272_44865394_44865448_44873501
transcript_125455.known	chr21	-	2807	16	FSM	ENSG00000160255.18	ENST00000652462.1	2807	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.24499443206436	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCACTGTGTCCGCTGT	18	True	NA	-4	True	AATAAA	-27	NA	44920899	44885952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44886431_44886735_44886903_44888692_44888896_44889275_44889496_44889977_44890223_44891808_44891997_44893403_44893545_44894970_44895061_44899066_44899163_44900319_44900476_44901491_44901734_44903364_44903536_44906914_44907096_44910283_44910373_44910724_44910786_44920820
transcript_125456.known	chr21	-	2348	3	FSM	ENSG00000183250.13	ENST00000660377.2	2403	3	55	0	27	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCTGAAAATCTTGAAAT	-6	True	NA	NA	False	NA	NA	NA	44939886	44933306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44935097_44935626_44935891_44939592
transcript_125457.known	chr21	-	1033	4	FSM	ENSG00000183250.13	ENST00000330551.3	1033	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGGGTCAATAGTCACA	56	False	NA	NA	False	AGTAAA	-24	NA	44939845	44934724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44935097_44935626_44935891_44937538_44937683_44939592
transcript_125466.known	chr21	+	880	6	FSM	ENSG00000160256.13	ENST00000397826.7	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	49.0469163148918	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGCTGGGCACACC	-8	True	NA	5	True	NA	NA	NA	44940011	44976989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_125467.known	chr21	+	892	6	FSM	ENSG00000160256.13	ENST00000291634.11	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	61.1031914060141	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	9	True	NA	-11	True	AATAAA	-42	NA	44940028	44976973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_125471.nnic	chr21	+	826	5	NIC	ENSG00000160256.13	novel	892	6	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	111.268818633074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	6	True	NA	-11	True	AATAAA	-42	NA	44940025	44976973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44976679
transcript_125483.known	chr21	+	6902	11	FSM	ENSG00000197381.17	ENST00000348831.9	6902	11	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_9	13.5517526541772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	-10	True	NA	5	True	AATAAA	-18	NA	45074579	45226560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184922_45185092_45204554_45204737_45220835_45221015_45222017
transcript_125484.known	chr21	+	587	4	FSM	ENSG00000197381.17	ENST00000462214.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	6.79869268479038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATCCTGATATGTC	13	False	NA	NA	False	NA	NA	NA	45073852	45137326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45073904_45128401_45128574_45134714_45134833_45137080
transcript_125496.known	chr21	-	3077	10	FSM	ENSG00000186866.17	ENST00000334538.13	3077	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	66.6807392554576	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-9	True	NA	-6	True	AATAAA	-21	NA	45287898	45263927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45265636_45266021_45266228_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
transcript_12550.known	chr1	-	625	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	1161	False	NA	NA	False	AATAAA	-31	NA	120341839	120267336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_120267839_120341716
transcript_125509.nnic	chr21	-	2868	9	NIC	ENSG00000186866.17	novel	2861	9	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	60.1839627724862	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGGAGTGTA	NA	False	NA	-13	True	AATAAA	-14	NA	45287932	45263934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282399_45283351_45283528_45285677_45285929_45287740
transcript_125511.nic	chr21	-	2929	9	NIC	ENSG00000186866.17	novel	2861	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	58.7021081393164	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGGAGTGTA	NA	False	NA	-13	True	AATAAA	-14	NA	45287932	45263934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283351_45283528_45285677_45285929_45287740
transcript_125514.known	chr21	-	2861	9	FSM	ENSG00000186866.17	ENST00000349485.10	2861	9	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	28.6179030503634	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGGAGTGTA	-6	True	NA	-13	True	AATAAA	-14	NA	45287895	45263934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
transcript_125517.known	chr21	-	4825	8	FSM	ENSG00000186866.17	ENST00000331343.11	4825	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	27.656050745852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-9	True	NA	-6	True	AATAAA	-21	NA	45287898	45263927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
transcript_125530.known	chr21	+	7540	3	FSM	ENSG00000223768.3	ENST00000400362.3	7540	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATACAACTATATATTACA	-12	True	NA	NA	False	TATAAA	-45	NA	45288049	45297806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45288166_45289350_45289439_45290470
transcript_125532.known	chr21	+	389	3	FSM	ENSG00000223768.3	ENST00000454115.7	480	3	17	74	2	-74	multi-exon	FALSE	canonical	3	5	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCTCAGTCGGACACA	-10	True	NA	NA	False	NA	NA	NA	45288051	45290578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45288245_45289350_45289439_45290470
transcript_125533.known	chr21	+	4397	4	FSM	ENSG00000223768.3	ENST00000647108.1	4397	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.8770215933527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTAGATGTGTGTGT	0	True	NA	13	True	TATAAA	-17	NA	45288061	45297354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45288166_45289350_45289439_45290470_45293523_45296201
transcript_125576.known	chr21	+	5408	42	FSM	ENSG00000182871.16	ENST00000651438.1	5408	42	0	0	0	0	multi-exon	FALSE	canonical	3	1914	junction_8	230.566454512491	1512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTGCAAGCAGCC	18	True	NA	18	True	AATAAA	-19	NA	45405164	45513720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45405242_45405378_45405474_45468241_45468787_45473894_45473982_45475475_45475536_45476350_45476481_45477410_45477488_45477749_45477966_45478326_45478354_45479901_45479965_45480069_45480157_45480466_45480521_45480699_45480859_45481962_45482026_45482794_45482822_45486860_45486993_45487446_45487510_45488417_45488445_45489485_45489522_45490274_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505837_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
transcript_12570.nnic	chr1	-	2845	8	NNC	ENSG00000275131.3	novel	6897	42	NA	NA	-10630	-15653	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	40.66136912077	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCGCCAGCTTCGTCT	NA	False	NA	NA	False	AAGAAA	-3	NA	120558987	120544039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_120544085_120544266_120544381_120545280_120545440_120548288_120548502_120548640_120548734_120548972_120549093_120550144_120550277_120557018
transcript_12573.known	chr1	+	1111	5	FSM	ENSG00000286106.2	ENST00000624419.2	1111	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.01041064547005	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACATTAACAGTAGGTGA	-1	True	NA	NA	False	AATAAA	-16	NA	120723945	120793874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120724251_120763627_120763710_120784973_120785234_120793160_120793497_120793746
transcript_125764.known	chr21	-	1884	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	90.8748590095192	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-1	True	NA	-6	True	ATTAAA	-15	NA	45542471	45514714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_125768.nnic	chr21	-	2917	6	NNC	ENSG00000173638.19	novel	4991	6	NA	NA	32	0	intron_retention	FALSE	canonical	0	0	junction_4	91.851183988014	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	1997	False	NA	-6	True	ATTAAA	-15	NA	45542408	45514714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542259
transcript_125769.known	chr21	-	4991	6	FSM	ENSG00000173638.19	ENST00000311124.9	4991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.4031412966771	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTTCCTTTTATT	-6	True	NA	-19	True	AATACA	-1	NA	45542440	45512564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_12577.known	chr1	+	821	3	FSM	ENSG00000226067.7	ENST00000621058.5	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	-8	True	NA	NA	False	AATAAA	-31	NA	120913220	120953463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120913451_120952438_120952786_120953219
transcript_12578.known	chr1	+	1261	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1061	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120913451_120952438
transcript_12579.known	chr1	+	692	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	19.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1033	False	NA	NA	False	AATAAA	-28	NA	120913183	120953460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120913451_120952438_120952626_120953222
transcript_125794.known	chr21	+	2202	16	FSM	ENSG00000183570.17	ENST00000400314.5	2202	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.91269819963779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTGGCTTGTCTCTG	2	True	NA	18	True	AATAAA	-19	NA	45643693	45942454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45643869_45735391_45735430_45849960_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45913950_45914026_45917587_45917630_45929916_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
transcript_12580.known	chr1	+	7091	10	FSM	ENSG00000171943.12	ENST00000367123.8	7091	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	85.0790482107343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAACAGAAATTGTATA	-5	True	NA	NA	False	AATAAA	-21	NA	121184974	121392874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382700_121382926_121386505_121386608_121387633
transcript_125800.known	chr21	+	1911	13	FSM	ENSG00000183570.17	ENST00000400308.5	1911	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	7.06320670013903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTGGCTTGTCTCTG	138	False	NA	18	True	AATAAA	-19	NA	45849960	45942454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45917587_45917630_45929919_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
transcript_125801.nnic	chr21	+	1322	2	Genic_Genomic	ENSG00000274248.1	novel	465	1	NA	NA	-1776	-2	multi-exon	FALSE	canonical	3	41	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGCTTGGAGGGCTTGG	NA	False	NA	13	True	AATAAA	-17	NA	45972712	45974951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr21_+_45973177_45974093
transcript_125818.known	chr21	+	4203	35	FSM	ENSG00000142156.16	ENST00000361866.8	4203	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	158.657876575063	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTTATCTTCCCC	12	True	NA	22	True	AATAAA	-15	NA	45981769	46005048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46000768_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_125850.nic	chr21	+	4758	34	NIC	ENSG00000142156.16	novel	4203	35	NA	NA	-70	0	intron_retention	FALSE	canonical	3	462	junction_28	87.3170762737684	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTTATCTTCCCC	4357	False	NA	22	True	AATAAA	-15	NA	45981699	46005048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_12588.nic	chr1	+	3414	10	NIC	ENSG00000171943.12	novel	7091	10	NA	NA	-13	1221	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	88.2313177511181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGAATGGCATTTTAGC	NA	False	NA	NA	False	ATTAAA	-16	NA	121184961	121389187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382703_121382926_121386505_121386608_121387633
transcript_12589.nic	chr1	+	3510	10	NIC	ENSG00000171943.12	novel	7091	10	NA	NA	-13	1317	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	88.2313177511181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCACCATCATCATTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	121184961	121389283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382703_121382926_121386505_121386608_121387633
transcript_12591.nic	chr1	+	3940	5	ISM	ENSG00000171943.12	ENST00000367123.8	7091	10	-13	24770	-13	-19862	5prime_fragment	FALSE	canonical	3	105	junction_1	40.1458279276938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGTTCAGAGAATAGC	NA	False	NA	NA	False	AAAAAG	-15	NA	121184961	121368104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292
transcript_12592.nic	chr1	+	1330	4	ISM	ENSG00000171943.12	ENST00000367123.8	7091	10	-13	68032	-13	-63124	5prime_fragment	FALSE	canonical	3	105	junction_1	46.1976430375211	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAATATCTTATTGGCC	NA	False	NA	NA	False	AATAAA	-22	NA	121184961	121324842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477
transcript_12595.known	chr1	-	1773	4	FSM	ENSG00000188610.12	ENST00000355228.8	1773	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.259299015623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	424	False	NA	NA	False	AATAAA	-18	NA	121183911	121167719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183457
transcript_12596.known	chr1	-	2396	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	31.8468557666565	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAGGCTAATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121184340	121167645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
transcript_125963.known	chr21	+	2358	6	FSM	ENSG00000142156.16	ENST00000498614.5	2358	6	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_2	33.4041913537807	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTTATCTTCCCCAC	2293	False	NA	24	True	AATAAA	-17	NA	46001196	46005050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_125964.known	chr21	+	968	3	FSM	ENSG00000142156.16	ENST00000486023.1	968	3	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTCGCTAGATTTTTT	150	False	NA	21	True	AGTAAA	-26	NA	46002488	46004106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46002711_46003119_46003150_46003390
transcript_125967.known	chr21	+	3445	28	FSM	ENSG00000142173.16	ENST00000300527.9	3445	28	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	64.6630604399416	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCCTGCTTGCGAGC	-18	True	NA	26	True	AATAAA	-14	NA	46098111	46132848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46131953
transcript_12598.known	chr1	+	4235	8	FSM	ENSG00000231752.7	ENST00000622787.4	4235	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.4740938038184	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGTATTTGCTTCTTT	-10	True	NA	NA	False	AATAAA	-19	NA	121519111	121571892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_121519460_121556509_121556697_121556930_121557020_121562227_121562356_121564636_121564914_121565763_121565798_121568146_121568202_121568775
transcript_125981.known	chr21	+	3101	27	FSM	ENSG00000142173.16	ENST00000397763.5	3101	27	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_26	108.914303210308	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGTCCTTCTTTGCTG	-5	True	NA	17	True	NA	NA	NA	46111449	46129808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46129195
transcript_125993.known	chr21	-	1182	4	FSM	ENSG00000160284.15	ENST00000330205.10	1182	4	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_2	16.4991582276861	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCTCTTTGAGGGCG	NA	False	NA	1	True	ATTAAA	-27	NA	46184476	46161147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46161706_46161915_46162068_46168307_46168659_46184355
transcript_125994.nnic	chr21	-	1412	4	NNC	ENSG00000160284.15	novel	2304	5	NA	NA	-306	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	257.824660487618	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTTTACCTCTGGC	NA	False	NA	-11	True	ATTAAA	-15	NA	46184782	46161159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_46161706_46161915_46162068_46168371_46168659_46184355
transcript_125996.nic	chr21	-	1396	3	NIC	ENSG00000160284.15	novel	2304	5	NA	NA	-16	0	intron_retention	FALSE	canonical	3	529	junction_1	20	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTTTACCTCTGGC	NA	False	NA	-11	True	ATTAAA	-15	NA	46184492	46161159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46162068_46168307_46168659_46184355
transcript_125998.known	chr21	-	2995	23	FSM	ENSG00000160285.15	ENST00000356396.8	2995	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	135.108006993364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCCGTACTTTGTAAC	-36	False	NA	NA	False	GATAAA	-18	NA	46228822	46188140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46188822_46191065_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_12600.known	chr1	+	2675	2	FSM	ENSG00000232721.3	ENST00000443018.3	2743	2	68	0	68	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATGGTACCTGGTTTT	24	False	NA	NA	False	AATAAA	-16	NA	143736065	143739506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_143736124_143736889
transcript_126006.known	chr21	-	4886	22	FSM	ENSG00000160285.15	ENST00000397728.8	4886	22	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_21	67.2864051459158	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	12	True	NA	-1	True	ATTAAA	-17	NA	46228774	46188445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_126008.known	chr21	-	2523	22	FSM	ENSG00000160285.15	ENST00000522411.5	2523	22	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_18	122.697256611733	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTTCTGACCAATAGC	5	True	NA	NA	False	NA	NA	NA	46228781	46190782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222662_46222739_46227551_46227691_46228433_46228600_46228731
transcript_12601.known	chr1	-	2395	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	51.227162933567	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	0	True	NA	NA	False	AATAAA	-20	NA	143971986	143955286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
transcript_126017.known	chr21	-	4390	21	FSM	ENSG00000160285.15	ENST00000457828.6	4390	21	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_5	49.2327127020236	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACACTGTGTTTCGT	NA	False	NA	-6	True	AATAAA	-26	NA	46228824	46189123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433
transcript_126018.nic	chr21	-	4350	21	ISM	ENSG00000160285.15	ENST00000522411.5	2523	22	-37	-1658	4	0	intron_retention	FALSE	canonical	3	81	junction_18	118.315214575303	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCACACTGTGTTTCG	-32	True	NA	-7	True	AATAAA	-25	NA	46228818	46189124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222662_46222739_46227551_46227691_46228433
transcript_126025.nnic	chr21	-	4232	21	NIC	ENSG00000160285.15	novel	4886	22	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	125.129572843513	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCACACTGTGTTTCG	NA	False	NA	-7	True	AATAAA	-25	NA	46228865	46189124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_126038.nnic	chr21	-	4317	20	NIC	ENSG00000160285.15	novel	4390	21	NA	NA	4	0	intron_retention	FALSE	canonical	3	80	junction_4	119.95804899216	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCACACTGTGTTTCG	-32	True	NA	-7	True	AATAAA	-25	NA	46228818	46189124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433
transcript_12605.known	chr1	-	314	2	FSM	ENSG00000237343.1	ENST00000455105.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGGCGCTACTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	144419192	144418112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_144418371_144419136
transcript_126082.nic	chr21	-	6785	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_28	56.3770560510177	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	3	True	NA	-11	True	GATAAA	-15	NA	46286297	46235132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285698
transcript_126083.nic	chr21	-	6666	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_28	54.8571893600993	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	328	False	46286300	-11	True	GATAAA	-15	NA	46286282	46235132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285802
transcript_126095.nic	chr21	-	3391	8	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	-198	-2731	combination_of_known_junctions	FALSE	canonical	3	105	junction_7	34.3005920101228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGACTTTTATTTAAG	115	False	NA	NA	False	AAAACA	-3	NA	46286495	46272993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285802
transcript_126097.nic	chr21	-	3030	8	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	15	-2879	combination_of_known_junctions	FALSE	canonical	3	105	junction_7	34.3005920101228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTGGCGTGGTGGCAC	328	False	46286300	NA	False	AATACA	-5	NA	46286282	46273141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285802
transcript_126100.known	chr21	+	3213	4	FSM	ENSG00000215424.10	ENST00000664725.1	3213	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	9.2736184954957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAAACCTTACCTTAGT	8	True	NA	NA	False	ATTAAA	-3	NA	46229228	46246292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46243406
transcript_126103.known	chr21	+	2302	3	FSM	ENSG00000215424.10	ENST00000432735.5	2302	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	13	True	NA	NA	False	GATAAA	-41	NA	46229233	46242999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46236223_46236327_46240833
transcript_126104.known	chr21	+	2373	3	FSM	ENSG00000215424.10	ENST00000455567.2	2373	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAAACACTT	2101	False	NA	NA	False	TTTAAA	-7	NA	46229195	46251701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46240833_46241020_46249585
transcript_126105.known	chr21	+	2386	3	FSM	ENSG00000215424.10	ENST00000656253.1	2386	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAGACTTTCAGGAAA	3	True	NA	NA	False	AAAACA	-44	NA	46229223	46251745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46240836_46241020_46249585
transcript_126107.known	chr21	+	2280	2	FSM	ENSG00000215424.10	ENST00000421927.1	2280	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	26	False	NA	NA	False	GATAAA	-41	NA	46229246	46242999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229364_46240836
transcript_126108.known	chr21	-	876	2	FSM	ENSG00000160294.11	ENST00000426537.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTCTGGGCCTTCAAG	426	False	NA	NA	False	NA	NA	NA	46286184	46285004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46285395_46285698
transcript_126109.known	chr21	-	199	2	FSM	ENSG00000160294.11	ENST00000495475.1	199	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAACCCAACTAATC	713	False	NA	NA	False	NA	NA	NA	46285897	46285290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46285395_46285802
transcript_126111.known	chr21	+	739	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	15.039531242695	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	-28	True	NA	37	True	AATAAA	-44	NA	46286341	46297751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_126113.known	chr21	+	764	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	83.3407913329361	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	3	True	NA	37	True	AATAAA	-44	NA	46286644	46297751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_126115.known	chr21	+	890	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	78.6949101841338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	14	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
transcript_126117.known	chr21	+	912	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGAAAGGCTGGAGT	-15	True	NA	NA	False	NA	NA	NA	46286354	46291930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286416_46286869_46287124_46291333
transcript_12612.known	chr1	-	4535	20	FSM	ENSG00000266338.7	ENST00000488031.6	4535	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	21.2703218780954	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTTCTAATCTCTT	19	False	NA	NA	False	AATAAA	-16	NA	144461647	144421389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_144423257_144423869_144423976_144424689_144424863_144425516_144425569_144426277_144426451_144427046_144427099_144427817_144427991_144428605_144428658_144429699_144429864_144433772_144433825_144435110_144435317_144435780_144435854_144436894_144437110_144437944_144438048_144439828_144440039_144440140_144440296_144448774_144448917_144450771_144450803_144456536_144456806_144461380
transcript_126139.known	chr21	-	2970	8	FSM	ENSG00000160298.18	ENST00000291691.12	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	22.2582248040712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTATGACGTGATCCC	-29	True	NA	-6	True	AATAAA	-22	NA	46323870	46301129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317269_46318011_46318221_46322638
transcript_126152.known	chr21	-	2178	4	FSM	ENSG00000160298.18	ENST00000475776.1	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	16.739839372653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGACGAGCTCTCTCGG	-28	True	NA	NA	False	NA	NA	NA	46323869	46314870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46315548_46317207_46317269_46318011_46318221_46322638
transcript_126155.known	chr21	+	10526	47	FSM	ENSG00000160299.17	ENST00000359568.10	10526	47	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	39.8935966643823	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTGTTGTTTTTTTT	16	True	NA	44	True	AATAAA	-28	NA	46324155	46445769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479_46363935_46366583_46367140_46381693_46381841_46385831_46385984_46388741_46388885_46389198_46389432_46390669_46390833_46391163_46391377_46397264_46397495_46398013_46398131_46398234_46398256_46399589_46399797_46401550_46401722_46402330_46402484_46411188_46412068_46412836_46412993_46416068_46416840_46418203_46418307_46421969_46422125_46425830_46425972_46427621_46427796_46428394_46428591_46430009_46430233_46430506_46430658_46431528_46432216_46435903_46436149_46436978_46437082_46438163_46438338_46440082_46440203_46440854_46441085_46442496_46442574_46443809_46443949_46444693_46444822_46445283
transcript_126162.nic	chr21	+	2280	13	ISM	ENSG00000160299.17	ENST00000359568.10	10526	47	-111	88636	-96	3807	5prime_fragment	FALSE	canonical	3	27	junction_1	5.99073358520381	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTGTATGGGAAGT	3347	False	NA	NA	False	AATAGA	-4	NA	46324044	46357133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973
transcript_126163.nic	chr21	+	2636	13	ISM	ENSG00000160299.17	ENST00000480896.5	10485	47	-271	88636	-271	3807	5prime_fragment	FALSE	canonical	3	17	junction_1	8.03983139679489	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTGTATGGGAAGT	477	False	NA	NA	False	AATAGA	-4	NA	46324616	46357133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46325211_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973
transcript_126171.nic	chr21	+	1451	8	ISM	ENSG00000160299.17	ENST00000359568.10	10526	47	-54	95969	-39	0	5prime_fragment	FALSE	canonical	3	27	junction_1	6.05754715631834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACAGCTGGAG	-38	True	NA	NA	False	NA	NA	NA	46324101	46349800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683
transcript_126176.known	chr21	+	1415	8	FSM	ENSG00000160299.17	ENST00000490468.5	1415	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	16.6770035971571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACAGCTGGAG	1	True	NA	NA	False	NA	NA	NA	46324140	46349800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346722_46346982_46347456_46347513_46349011_46349187_46349683
transcript_126188.known	chr21	+	2760	21	FSM	ENSG00000160305.18	ENST00000435722.7	2760	21	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_8	12.1144541767262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCAGAGTTAATATCCT	100	True	NA	7	True	AGTAAA	-21	NA	46459056	46547205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
transcript_126190.known	chr21	+	2711	20	FSM	ENSG00000160305.18	ENST00000466639.5	2711	20	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	18.4814048943744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCAGAGTTAATATCCT	20	True	NA	7	True	AGTAAA	-21	NA	46458976	46547205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
transcript_126194.nic	chr21	+	1887	9	ISM	ENSG00000160305.18	ENST00000435722.7	2760	21	-182	17586	-16	-15586	5prime_fragment	FALSE	canonical	1	31	junction_8	14.609500333687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGTGAAAAATATTAAATA	-82	True	NA	NA	False	NA	NA	NA	46458874	46529619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091
transcript_126197.known	chr21	+	3044	22	FSM	ENSG00000160305.18	ENST00000457905.7	3044	22	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_8	13.4180979081956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTCAATATTTATTTTT	-7	True	NA	NA	False	AATATA	-19	NA	46458949	46550110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914_46547043_46549770
transcript_126201.known	chr21	+	2354	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_11	175.811788922037	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	7	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_126205.known	chr21	+	2131	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	170.309277492449	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	8834	False	NA	24	True	AATAAA	-24	NA	46635614	46664951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_126212.known	chr21	+	1932	9	FSM	ENSG00000160310.19	ENST00000440086.5	1932	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	230.324736784827	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	14	True	NA	NA	False	ATTAAA	-16	NA	46635680	46665124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46661799_46661937_46663382_46663555_46664294
transcript_126214.nic	chr21	+	1479	8	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	-6	3681	-6	0	5prime_fragment	FALSE	canonical	3	286	junction_7	140.175837097991	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	8828	False	NA	3	True	AATAAA	-16	NA	46635608	46661270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_126215.known	chr21	+	1874	8	FSM	ENSG00000160310.19	ENST00000458387.6	1874	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	237.042922144441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGGCTGGGTGCAGT	8814	False	NA	NA	False	ATTAAA	-9	NA	46635594	46665117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46663382_46663555_46664294
transcript_126218.nic	chr21	+	2362	8	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-55	4982	4	712	5prime_fragment	FALSE	canonical	3	273	junction_1	169.20148597794	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGAAGTTACTGCTT	8838	False	NA	39	True	ATTAAA	-19	NA	46635618	46660142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_126225.nic	chr21	+	1658	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	-6	5414	-6	107	5prime_fragment	FALSE	canonical	3	395	junction_6	105.107352528525	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACCAATAAATATATGAAA	8828	False	NA	NA	False	AATAAA	-6	NA	46635608	46659537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_126226.nic	chr21	+	2263	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	-6	4809	-6	712	5prime_fragment	FALSE	canonical	3	395	junction_6	105.107352528525	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGAAGTTACTGCTT	8828	False	NA	39	True	ATTAAA	-19	NA	46635608	46660142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_126227.known	chr21	+	1011	7	FSM	ENSG00000160310.19	ENST00000291705.11	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	230.207454749455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGGTCCTTCACAGAC	-25	True	NA	NA	False	NA	NA	NA	46635641	46664473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46664294
transcript_126230.nic	chr21	+	1113	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-55	15236	4	0	5prime_fragment	FALSE	canonical	3	273	junction_1	176.444514413644	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	8838	False	NA	32	True	NA	NA	NA	46635618	46649888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_126231.known	chr21	+	954	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	74.4215022691695	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	7	True	NA	37	True	NA	NA	NA	46635673	46649893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_126237.known	chr21	+	2880	11	FSM	ENSG00000160310.19	ENST00000397637.5	2880	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	177.994971839094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	-17	True	NA	24	True	AATAAA	-24	NA	46635649	46664951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_12624.known	chr1	-	2367	10	FSM	ENSG00000196369.12	ENST00000641863.2	6901	10	-199	4733	0	-2740	multi-exon	FALSE	canonical	3	61	junction_7	67.6309885872146	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAAAAGTTGTATATGT	NA	False	NA	NA	False	NA	NA	NA	145095528	144892020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_144892382_144893407_144893510_144897115_144897341_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144995007_144995201_145092834_145093444_145095222
transcript_126241.known	chr22	+	8566	13	FSM	ENSG00000177663.14	ENST00000319363.11	8566	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	21.7517559955257	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGTTCTTCTTATTC	21	True	NA	NA	False	AATAAA	-17	NA	17084999	17115693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995_17102044_17102138_17102303_17103493_17103578_17104725_17104811_17105590_17105603_17105852_17105955_17107726_17107769_17108306
transcript_126245.known	chr22	+	8506	12	FSM	ENSG00000177663.14	ENST00000612619.1	8506	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_9	20.426445344736	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTGTTCTTCTTATTCA	-20	True	NA	NA	False	AATAAA	-18	NA	17084958	17115694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995_17102044_17102138_17102303_17103493_17103578_17104725_17104811_17105590_17105603_17107726_17107769_17108306
transcript_126258.known	chr22	+	1175	4	FSM	ENSG00000235478.6	ENST00000441544.3	1231	4	55	1	9	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATGCACTCAGTCTTTT	6	True	NA	NA	False	ATTAAA	-20	NA	17121594	17132104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17122040_17124654_17124772_17130361_17130485_17131614
transcript_126307.nic	chr22	-	2486	8	NIC	ENSG00000069998.12	novel	1799	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_7	269.070357235533	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	NA	False	NA	-11	True	AATAAA	-28	NA	17159297	17137521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17158456
transcript_126309.known	chr22	-	1799	8	FSM	ENSG00000069998.12	ENST00000336737.8	1799	8	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_7	106.005005657704	3898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGAAGCTCTGTCTG	-20	True	NA	-9	True	AATAAA	-30	NA	17159277	17137519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17159125
transcript_126325.nnic	chr22	-	2468	8	NNC	ENSG00000069998.12	novel	1799	8	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	129	junction_4	269.44114498763	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	NA	False	NA	-11	True	AATAAA	-28	NA	17159325	17137521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143755_17145023_17145118_17148447_17148561_17149541_17149746_17159125
transcript_126349.nnic	chr22	-	1633	7	NIC	ENSG00000069998.12	novel	1799	8	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	171	junction_6	270.882303265131	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	NA	False	NA	-11	True	AATAAA	-28	NA	17159317	17137521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17159125
transcript_12635.known	chr1	+	2423	4	FSM	ENSG00000215784.6	ENST00000400889.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	46.8828326789242	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	-5	True	NA	NA	False	AATAAA	-20	NA	145095973	145112696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145097000_145098987_145099066_145103006_145103132_145111502
transcript_12640.known	chr1	-	3389	1	FSM	ENSG00000272419.6	ENST00000621033.1	3389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTGATTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	145167488	145164099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145164100_145167500
transcript_126409.known	chr22	+	339	2	FSM	ENSG00000185837.4	ENST00000329743.4	379	2	32	8	27	-8	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATATGTCCCTTGTCT	20	False	NA	-1	True	AATAAA	-14	NA	17159383	17165439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17159552_17165268
transcript_12641.known	chr1	+	164	1	FSM	ENSG00000207501.1	ENST00000384770.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTCTGTGGTGCGAAT	0	True	NA	NA	False	NA	NA	NA	145281115	145281279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145281100_145281300
transcript_126410.known	chr22	+	616	2	FSM	ENSG00000185837.4	ENST00000431923.2	660	2	42	2	42	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCCCTTGTCTCTTTTT	35	False	NA	5	True	AATAAA	-20	NA	17159398	17165445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17159838_17165268
transcript_126411.known	chr22	-	3195	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	12.3153021346074	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	17199783	17179305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
transcript_126416.known	chr22	+	2186	11	FSM	ENSG00000182902.14	ENST00000327451.11	2186	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	15.3088209866077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGTCACTCTTCAAACT	3	True	NA	NA	False	ATTAAA	-18	NA	17563497	17590995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17563714_17569923_17569987_17579744_17579965_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_126418.nnic	chr22	+	1947	9	NNC	ENSG00000182902.14	novel	2454	4	NA	NA	10777	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	8.8140512819021	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	NA	False	NA	3	True	AATAAA	-12	NA	17580483	17590881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_17580858_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_126421.known	chr22	+	2057	10	FSM	ENSG00000182902.14	ENST00000399813.1	2057	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.6969761969749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	6	True	NA	3	True	AATAAA	-12	NA	17563449	17590881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17563714_17579744_17579965_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_126422.known	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	37.3689376354212	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	12	True	NA	3	True	NA	NA	NA	17628749	17592135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_126423.known	chr22	-	994	8	FSM	ENSG00000131100.13	ENST00000399798.6	994	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	153.411544679064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGTTGCATGGGCT	12	True	NA	39	True	NA	NA	NA	17628749	17592408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17628602
transcript_126424.known	chr22	-	1208	8	FSM	ENSG00000131100.13	ENST00000399796.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	165.812040132981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGATTTCTAGTGT	14	True	NA	-30	True	ATTAAA	-14	NA	17628747	17592168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_12643.known	chr1	+	1955	14	FSM	ENSG00000117262.19	ENST00000460277.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	70.5805176196351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	2	True	NA	NA	False	ATTAAA	-16	NA	145607989	145670463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623592_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_126432.known	chr22	+	4959	7	FSM	ENSG00000099968.18	ENST00000317582.10	4959	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_6	45.3336397048471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	8	True	NA	NA	False	NA	NA	NA	17638756	17730855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
transcript_126436.known	chr22	+	2112	6	FSM	ENSG00000099968.18	ENST00000493680.5	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	40.0869055927244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATATTTTTTGAGC	23	False	NA	-31	True	AATAAA	-24	NA	17638771	17703733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
transcript_12644.known	chr1	+	2124	14	FSM	ENSG00000117262.19	ENST00000313835.14	2124	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	26.8771036055757	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGGTATGTCATTTT	0	True	NA	NA	False	AATAGA	-16	NA	145607987	145670650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_126440.known	chr22	+	5062	6	FSM	ENSG00000099968.18	ENST00000418951.6	5062	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	92.4025973660914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17702242_17702387_17726676
transcript_126443.known	chr22	+	2662	6	FSM	ENSG00000099968.18	ENST00000498133.5	2662	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	95.2063023123995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGTAGGAAAAAG	-8	True	NA	NA	False	AATAGA	-21	NA	17638740	17728699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17696140_17696211_17702242_17702387_17726676
transcript_126446.known	chr22	+	4961	6	FSM	ENSG00000099968.18	ENST00000618481.4	4961	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.7725222869182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
transcript_126449.known	chr22	+	4458	5	FSM	ENSG00000099968.18	ENST00000355028.4	4458	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	107.368524251756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTTTCTCTTAATTT	3	True	NA	7	True	AATAAA	-19	NA	17638810	17730622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17726676
transcript_126452.known	chr22	+	4905	5	FSM	ENSG00000099968.18	ENST00000337612.9	4905	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	102.831172316569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17702242_17702387_17726676
transcript_126458.known	chr22	-	2495	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	206.785879595295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	475	False	NA	0	True	AATAAA	-18	NA	17774016	17734137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
transcript_126459.known	chr22	-	2177	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	88.9966291496481	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-16	True	NA	0	True	AATAAA	-18	NA	17774469	17734137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
transcript_126464.known	chr22	-	907	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	223.194281960807	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGCCTTCATAT	-4	True	NA	-39	True	AATATA	-27	NA	17774495	17735363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
transcript_126466.known	chr22	-	1988	5	FSM	ENSG00000015475.19	ENST00000614949.4	1988	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	238.445355375189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTTTTCATGTTTTGGA	-4	True	NA	-4	True	AATAAA	-14	NA	17774495	17734141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17750104_17750175_17774380
transcript_126470.known	chr22	-	1879	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	245.837796569653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGTTTGGAAATAAA	2	True	NA	-37	True	AAAAAG	-23	NA	17774489	17734174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
transcript_126485.known	chr22	+	18445	6	FSM	ENSG00000215193.14	ENST00000329627.11	18445	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8.40476055578028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTGTTGTGAGGAATA	3	True	NA	2	True	AATAAA	-13	NA	18077922	18105396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18078048_18078295_18078607_18079873_18080015_18083436_18083733_18085111_18085259_18087971
transcript_126487.known	chr22	+	18626	5	FSM	ENSG00000215193.14	ENST00000399744.8	18626	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	7.79021822544144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTGTTGTGAGGAATA	-13	True	NA	2	True	AATAAA	-13	NA	18077989	18105396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18078607_18079873_18080015_18083436_18083733_18085111_18085259_18087971
transcript_126491.known	chr22	+	2003	5	FSM	ENSG00000183785.16	ENST00000330423.8	2003	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTGTCAAGTGAGAGAA	-2	True	NA	NA	False	AATAAA	-19	NA	18110808	18131732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18110869_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_126492.known	chr22	+	815	4	FSM	ENSG00000215193.14	ENST00000428061.2	815	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	10.4986771653491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGAAGCAGAGCGACAGA	374	False	NA	NA	False	NA	NA	NA	18078376	18088119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18078607_18079873_18080015_18083436_18083733_18087971
transcript_126494.known	chr22	-	1699	1	FSM	ENSG00000225335.3	ENST00000607927.1	1699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTCTCTTTTGTTCA	-4	False	NA	NA	False	TATAAA	-16	NA	18078884	18077185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18077200_18078900
transcript_126495.known	chr22	+	1518	5	FSM	ENSG00000183785.16	ENST00000316027.10	1518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.48746859276655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCTTTATTTATG	-7	True	NA	15	True	AATATA	-14	NA	18110686	18131154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18110840_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_126497.known	chr22	+	1858	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	4.60434577328853	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	-1	True	NA	NA	False	AATAAA	-17	NA	18150169	18177397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_126503.known	chr22	-	1787	4	FSM	ENSG00000274602.5	ENST00000619742.4	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	58.8104299139759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGGAATCTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	18537865	18533656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649
transcript_126504.known	chr22	-	2425	3	FSM	ENSG00000274602.5	ENST00000610959.4	2425	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18537791	18533645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18534054_18535244_18535329_18535858
transcript_126507.known	chr22	-	2203	14	FSM	ENSG00000100033.17	ENST00000357068.11	2203	14	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	106.238205053633	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-1	True	NA	NA	False	AATAAA	-15	NA	18936293	18912780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
transcript_126517.nnic	chr22	+	1354	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	12	16	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	11	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	2049	False	NA	22	True	NA	NA	NA	18939457	18947757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_18939750_18945071_18945167_18946790
transcript_126522.known	chr22	+	1837	2	FSM	ENSG00000183628.14	ENST00000608842.1	1837	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	24	True	NA	NA	False	NA	NA	NA	18906352	18908269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18906485_18906564
transcript_126523.nic	chr22	+	1215	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3075	0	40	0	3prime_fragment	FALSE	canonical	3	38	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	2077	False	NA	6	True	NA	NA	NA	18939485	18947741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_18939750_18946790
transcript_126524.known	chr22	-	2034	14	FSM	ENSG00000100033.17	ENST00000420436.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	129.067570945697	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-4	True	NA	NA	False	AATAAA	-15	NA	18936296	18912780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931182_18936169
transcript_126525.known	chr22	-	3106	13	FSM	ENSG00000100033.17	ENST00000491604.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	107.107001275464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-3	True	NA	NA	False	AATAAA	-15	NA	18936295	18912780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
transcript_126526.known	chr22	+	3245	5	FSM	ENSG00000183628.14	ENST00000483718.5	3245	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	47.5420866180693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTTTTCCTTTAAC	-4	True	NA	NA	False	ATTAAA	-18	NA	18906324	18914238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18906468_18906564_18906726_18910171_18910273_18910887_18911029_18911539
transcript_126527.known	chr22	+	1117	5	FSM	ENSG00000183628.14	ENST00000331444.12	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	23.0705439901187	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTGTGATAGCTG	-9	True	NA	NA	False	AATAAA	-22	NA	18906319	18912088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18906485_18906564_18906726_18910171_18910273_18910887_18911029_18911539
transcript_126531.known	chr22	+	3581	6	FSM	ENSG00000273032.3	ENST00000421572.2	3581	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	7.19444229944198	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTCCAGGATTGGCC	28	True	NA	-6	True	ATTAAA	-3	NA	18970514	18994615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18970659_18985835_18986020_18987756_18987901_18988090_18988196_18990719_18990925_18991816
transcript_126538.known	chr22	-	4484	11	FSM	ENSG00000070413.20	ENST00000545799.5	4484	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	222.013062678753	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	19122454	19036281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065059_19065184_19065190_19068095_19068226_19089367_19089491_19122127
transcript_126543.known	chr22	-	4438	10	FSM	ENSG00000070413.20	ENST00000263196.12	4438	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	176.91184943111	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	1	True	NA	-5	True	AATAAA	-15	NA	19122412	19036285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_126551.known	chr22	-	4361	9	FSM	ENSG00000070413.20	ENST00000537045.5	4361	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	221.464408822276	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	19122454	19036281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19122127
transcript_126558.nic	chr22	-	3018	9	ISM	ENSG00000070413.20	ENST00000263196.12	4438	10	-49	3405	-7	-1854	5prime_fragment	FALSE	non_canonical	0	0	junction_6	187.622584927828	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTCGACTGCCTACCAC	NA	False	NA	-22	True	AATAAA	-17	NA	19122461	19039690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_12657.known	chr1	-	2065	9	FSM	ENSG00000174827.14	ENST00000417171.6	2065	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	27.1154937259125	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTATGCTTGATAGT	-4	True	NA	NA	False	AATAAA	-18	NA	145707368	145670984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145671490_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
transcript_126574.known	chr22	-	2101	10	FSM	ENSG00000100056.12	ENST00000472073.1	2101	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	40.3129731286237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTGTCATTAAAGAACA	5758	False	NA	-37	True	NA	NA	NA	19144633	19133967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144056
transcript_126576.known	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	15.2784848321236	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	12	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_126589.known	chr22	+	1445	1	FSM	ENSG00000260924.2	ENST00000565162.2	1445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCGACCAAGATAGTGT	NA	False	NA	23	True	AATAAA	-25	NA	19171394	19172839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19171400_19172800
transcript_126597.known	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	575.608373809833	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	340	False	NA	-27	True	AATAAA	-4	NA	19178521	19175592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
transcript_126598.known	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_8	160.180367086606	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	0	True	NA	-15	True	AATAAA	-16	NA	19178736	19175580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
transcript_12661.nic	chr1	+	1784	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	44.7160920574337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGATAAGTCGCAGAGTC	-30	True	NA	22	True	AATAAA	-27	NA	145824176	145842499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_126612.known	chr22	-	1598	8	FSM	ENSG00000100075.10	ENST00000470922.5	1598	8	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_7	165.952538088332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCAGAATAAACCGGAT	-3	True	NA	-44	True	NA	NA	NA	19178739	19175609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19178042_19178132_19178241_19178579
transcript_12662.nic	chr1	+	2026	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-5	266	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	44.7160920574337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGCCTGTTCTTTATT	-12	True	NA	29	True	NA	NA	NA	145824194	145842759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_12664.known	chr1	+	3777	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	17.607541287871	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	-7	True	NA	NA	False	AATAAA	-18	NA	145824199	145844402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_126668.known	chr22	-	4635	3	FSM	ENSG00000070371.16	ENST00000412649.5	4635	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGCTCTGCTTGGTGC	NA	False	NA	0	True	ATTAAA	-17	NA	19184831	19179475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19179970_19180198_19180239_19180730
transcript_126673.known	chr22	+	744	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	45.38232646698	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	7	True	NA	26	True	AATAAA	-18	NA	19432544	19436075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
transcript_126674.known	chr22	+	954	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	180.342883296113	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGCTCCTTTGTC	41	False	NA	18	True	AATAAA	-10	NA	19432578	19436067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
transcript_126675.nnic	chr22	-	1422	4	NNC	ENSG00000242259.9	novel	3720	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	198.840527950304	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	519	False	NA	-37	True	AATAAA	-15	NA	19447730	19440885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_19441695_19444011_19444391_19447377_19447546_19447664
transcript_126676.nnic	chr22	-	809	4	NNC	ENSG00000242259.9	novel	3720	3	NA	NA	-19	-613	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	198.840527950304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAATAATAAGTATTTTA	519	False	NA	-34	True	AATAAA	-41	NA	19447730	19441498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_19441695_19444011_19444391_19447377_19447546_19447664
transcript_126677.known	chr22	-	1005	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_2	10	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	13	True	NA	-37	True	AATAAA	-15	NA	19447692	19440885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19441695_19447377_19447546_19447664
transcript_126678.known	chr22	-	3720	3	FSM	ENSG00000242259.9	ENST00000399562.9	3720	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	179	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-6	True	NA	-37	True	AATAAA	-15	NA	19447711	19440885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19444391_19447377_19447546_19447664
transcript_126686.nic	chr22	-	1938	2	ISM	ENSG00000242259.9	ENST00000399562.9	3720	3	-19	4788	-19	-4788	5prime_fragment	FALSE	canonical	3	514	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGGCCAGGTGTCAGG	519	False	NA	NA	False	AAAAAG	-7	NA	19447730	19445673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_19447546_19447664
transcript_126690.nic	chr22	-	937	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_9	283.967525529867	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-1	True	NA	-5	True	AATAAA	-17	NA	19479215	19450620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
transcript_126691.nic	chr22	-	801	9	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_8	299.205197147376	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	13	False	19479214	-5	True	AATAAA	-17	NA	19479201	19450620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19479082
transcript_126692.known	chr22	+	2097	2	FSM	ENSG00000185065.6	ENST00000431090.1	2097	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTCTTCTGAGTGGTG	445	False	NA	NA	False	AATAAA	-19	NA	19447892	19450105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19448326_19448441
transcript_126693.known	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_11	63.568665288895	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-10	True	NA	-17	True	ATTAAA	-14	NA	19479193	19449910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_126694.known	chr22	-	5038	11	FSM	ENSG00000070010.19	ENST00000459854.5	5038	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	264.062416863892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	11	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475495_19475603_19479082
transcript_126695.known	chr22	-	1007	12	FSM	ENSG00000070010.19	ENST00000399523.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	256.690603871085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	11	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19450745_19454801_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_126698.known	chr22	+	2072	20	FSM	ENSG00000093009.11	ENST00000437685.6	2072	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	62.8666530561473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCTCTGGTCTCGAG	357	False	NA	25	True	AATAAA	-25	NA	19479825	19520611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19494506_19494603_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_126700.known	chr22	+	1879	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	24.9945673109524	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	-2	True	NA	22	True	AATAAA	-22	NA	19479919	19520608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_126706.nnic	chr22	+	1835	18	NIC	ENSG00000093009.11	novel	1879	19	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	53.4247846271442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCCCCATTGTGGCTC	404	False	NA	15	True	AATAAA	-15	NA	19479872	19520601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_126708.known	chr22	+	1693	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	49.1922293917032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	16	True	NA	-8	True	NA	NA	NA	19479937	19520578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_126711.nic	chr22	+	1160	12	ISM	ENSG00000093009.11	ENST00000263201.7	1879	19	-47	12735	-28	2503	5prime_fragment	FALSE	canonical	3	183	junction_3	18.1931782692632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCTGGATTTATCTT	404	False	NA	2	True	AATAAA	-15	NA	19479872	19507873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765
transcript_126714.known	chr22	+	1979	20	FSM	ENSG00000093009.11	ENST00000438587.6	1979	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	74.7494429703441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCCCCATTGTGGCTC	-12	True	NA	15	True	AATAAA	-15	NA	19479909	19520601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19480020_19480157_19480218_19480685_19480780_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516813_19516894_19518843_19518910_19520480
transcript_126715.known	chr22	-	2548	2	FSM	ENSG00000184113.10	ENST00000406028.1	2548	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCCTGTTCTCTG	NA	False	NA	0	True	AGTAAA	-18	NA	19527545	19523023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19524543_19526516
transcript_126716.known	chr22	-	1384	1	FSM	ENSG00000184113.10	ENST00000618236.2	1384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTGTCCTGTTCT	-2	True	NA	-3	True	AGTAAA	-15	NA	19524410	19523026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19523000_19524400
transcript_126717.known	chr22	+	1974	12	FSM	ENSG00000184702.20	ENST00000406395.5	1974	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	20.5840345738838	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGTCCTGTCCTGGTGA	2	True	NA	-11	True	NA	NA	NA	19714503	19723274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721832_19721958_19722236_19722340_19722427
transcript_126721.known	chr22	+	2241	11	FSM	ENSG00000184702.20	ENST00000438754.6	2241	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	22.2584815295204	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGTGTCCGAGTGCT	-8	True	NA	34	True	NA	NA	NA	19718457	19723319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19718819_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721832_19721958_19722236_19722340_19722427
transcript_126733.nic	chr22	-	1592	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	-13	0	combination_of_known_splicesites	TRUE	canonical	3	60	junction_7	34.7680359889743	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-22	True	NA	-8	True	AATAAA	-14	NA	19854856	19788414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
transcript_126734.nic	chr22	-	1564	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	49.9411899035214	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-16	True	NA	-8	True	AATAAA	-14	NA	19854850	19788414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854681
transcript_126735.known	chr22	-	6642	8	FSM	ENSG00000185838.14	ENST00000329517.11	6642	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	16.1321076725635	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATAACAGCCATTCTG	7	True	NA	NA	False	AATAAA	-15	NA	19854874	19783222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
transcript_126740.known	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	17.3148940382422	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-9	True	NA	-8	True	AATAAA	-14	NA	19854843	19788414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
transcript_126743.nic	chr22	-	1436	7	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	51.4373945253408	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-8	True	AATAAA	-14	NA	19854986	19788414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19821227_19821376_19854442_19854540_19854819
transcript_126747.known	chr22	-	1197	6	FSM	ENSG00000185838.14	ENST00000460402.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	66.9644681902276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTGCCAGCTGAG	75	False	NA	-57	True	NA	NA	NA	19854806	19788463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854681
transcript_126748.nic	chr22	-	1222	6	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	48.8204875026868	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-8	True	AATAAA	-14	NA	19854920	19788414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854819
transcript_126755.nnic	chr22	-	1043	5	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	60.2053776667832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-8	True	AATAAA	-14	NA	19854904	19788414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19854442_19854540_19854819
transcript_126762.known	chr22	-	1385	3	FSM	ENSG00000215012.9	ENST00000484072.5	1385	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	68.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	18	True	NA	-7	True	AATAAA	-16	NA	19854863	19846145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19847390_19854442_19854540_19854819
transcript_126764.known	chr22	-	6653	3	FSM	ENSG00000215012.9	ENST00000328554.9	6653	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	7	True	NA	-7	True	AATAAA	-16	NA	19854874	19846145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19852487_19854442_19854540_19854659
transcript_126765.known	chr22	-	6523	3	FSM	ENSG00000215012.9	ENST00000407472.5	6523	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	45	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGCTTGTGTTTTCC	-15	True	NA	1	True	AATAAA	-24	NA	19854896	19846137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19852487_19854442_19854540_19854819
transcript_126771.known	chr22	-	6785	2	FSM	ENSG00000215012.9	ENST00000405640.1	6785	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-5	True	NA	-7	True	AATAAA	-16	NA	19854886	19846145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19852487_19854442
transcript_126778.known	chr22	-	4056	20	FSM	ENSG00000099889.14	ENST00000263207.8	4056	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	74.1805837316618	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	1	True	NA	-31	True	ATTAAA	-13	NA	20016823	19969895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19990584_19990813_20010454_20010509_20016588
transcript_126784.nnic	chr22	-	3801	19	NNC	ENSG00000099889.14	novel	4056	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	78.1000466321923	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-5	True	NA	-31	True	ATTAAA	-13	NA	19987187	19969895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19983672_19983820_19987072
transcript_126796.known	chr22	-	1941	18	FSM	ENSG00000184470.21	ENST00000400521.7	1941	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	23.9987023870662	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-3	True	NA	-5	True	AATAAA	-19	NA	19941818	19875521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_126799.nic	chr22	-	1874	18	NIC	ENSG00000184470.21	novel	1941	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	23.4983618658966	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-5	True	NA	-5	True	AATAAA	-19	NA	19941820	19875521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_126804.nic	chr22	-	3711	18	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	65.613158018726	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	8208	False	NA	-31	True	ATTAAA	-13	NA	19987244	19969895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_12681.known	chr1	-	9135	9	FSM	ENSG00000265491.5	ENST00000582693.5	9135	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	15.0784407350362	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTCTCATTTTGTT	-11	True	NA	0	True	AATAAA	-18	NA	145824095	145738867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145746998_145747994_145748111_145750406_145750501_145751437_145751511_145752977_145753050_145771710_145771920_145784538_145784597_145788907_145788967_145823771
transcript_126815.nic	chr22	-	3616	18	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-54	-93	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	65.613158018726	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAGAAAAAGCATTAAA	8208	False	NA	-53	True	AAGAAA	-3	NA	19987244	19969990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_126819.known	chr22	-	3155	17	FSM	ENSG00000184470.21	ENST00000400519.6	3155	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_16	25.0773802459507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	12	True	NA	-5	True	AATAAA	-19	NA	19941803	19875521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931096_19941700
transcript_126828.nic	chr22	-	3693	17	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_16	34.9615301974899	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	8208	False	NA	-31	True	ATTAAA	-13	NA	19987244	19969895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_12685.nic	chr1	+	2017	8	ISM	ENSG00000186141.9	ENST00000369294.5	1590	12	-106	5179	-18	460	intron_retention	FALSE	canonical	3	222	junction_2	11.4642300844222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTTTTAATCAACCAAAT	0	True	NA	NA	False	AAAAAG	-12	NA	145824069	145837314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493
transcript_126852.known	chr22	-	2682	16	FSM	ENSG00000099889.14	ENST00000406522.5	2682	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_15	35.753228292468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCATGCCTGGTACGTTC	8359	False	NA	NA	False	NA	NA	NA	19987093	19971227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_126878.known	chr22	-	1893	12	FSM	ENSG00000184470.21	ENST00000334363.14	1893	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.35296645596043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGGCACTCACCCTTC	11	True	NA	NA	False	ATTAAA	-15	NA	19941804	19894257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19895201_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_126887.known	chr22	-	850	7	FSM	ENSG00000184470.21	ENST00000485358.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	22.6034658109474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCCCAGGCTCCTGGTGC	222	False	NA	NA	False	NA	NA	NA	19881164	19875640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881035
transcript_126888.known	chr22	-	1129	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	13.9164171634321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	17	False	NA	-5	True	AATAAA	-19	NA	19881369	19875521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_126893.known	chr22	+	1548	6	FSM	ENSG00000093010.15	ENST00000403710.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.1645586870954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTTATATACTAATATC	-13	True	NA	-31	True	NA	NA	NA	19941772	19968958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19941898_19961198_19961290_19962232_19962816_19963565_19963760_19964167_19964300_19968535
transcript_126894.known	chr22	+	2272	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	59.4191888197744	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTCTCAGTGTTTTT	-14	True	NA	NA	False	NA	NA	NA	19941771	19969975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_126897.nic	chr22	-	2380	6	NIC	ENSG00000184470.21	novel	1129	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	43	junction_5	14.5931490775638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-2	True	NA	-5	True	AATAAA	-19	NA	19881388	19875521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_126899.known	chr22	-	2700	5	FSM	ENSG00000184470.21	ENST00000495655.2	2700	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.62807315119618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTGCTCTGCCTGCGGT	39	False	NA	-7	True	AATAAA	-17	NA	19881347	19875523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621
transcript_126902.nic	chr22	+	2182	9	NIC	ENSG00000183597.16	novel	2439	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	24	junction_1	23.6481368187855	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	4060	False	NA	27	True	AATAAA	-24	NA	20021086	20065926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126905.known	chr22	+	2439	9	FSM	ENSG00000183597.16	ENST00000456048.5	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.9797492023908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	4042	False	NA	26	True	AATAAA	-23	NA	20021068	20065925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126908.known	chr22	+	1689	9	FSM	ENSG00000183597.16	ENST00000450019.5	1689	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	28.8779760371117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGACCTGCTCCTGC	-1	True	NA	NA	False	NA	NA	NA	20021106	20065264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20053359_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126909.known	chr22	+	3509	9	FSM	ENSG00000183597.16	ENST00000327374.9	3509	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	24.4588302050609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGGGAGGCTGAG	2	True	NA	NA	False	AAAAAG	-43	NA	20021109	20067164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126913.known	chr22	+	1920	9	FSM	ENSG00000183597.16	ENST00000401833.5	1920	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	22.6767364274492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTTGCTCTGTCACCC	10	False	NA	NA	False	NA	NA	NA	20021138	20065364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021247_20036759_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126915.known	chr22	+	2084	8	FSM	ENSG00000183597.16	ENST00000432883.5	2084	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	24.2015347801392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	4042	False	NA	26	True	AATAAA	-23	NA	20021068	20065925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126919.known	chr22	+	2241	8	FSM	ENSG00000183597.16	ENST00000399807.7	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.9284601688444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGAATCTGTACCTGA	4062	False	NA	-37	True	NA	NA	NA	20021088	20065862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126923.nic	chr22	+	2170	8	NIC	ENSG00000183597.16	novel	3509	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	18	junction_1	25.1931315550691	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	-12	True	NA	27	True	AATAAA	-24	NA	20021095	20065926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_126925.known	chr22	+	570	7	FSM	ENSG00000183597.16	ENST00000450664.5	570	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	26.5418956034082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTGGGAAGCAGCT	-6	True	NA	NA	False	NA	NA	NA	20021101	20061576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529
transcript_126929.nic	chr22	+	1911	7	NIC	ENSG00000183597.16	novel	2084	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_5	28.6283658865352	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	4062	False	NA	27	True	AATAAA	-24	NA	20021088	20065926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20063337_20063443_20064541
transcript_126931.known	chr22	+	2011	7	FSM	ENSG00000183597.16	ENST00000398042.6	2011	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	29.1490422941589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	4045	False	NA	27	True	AATAAA	-24	NA	20021071	20065926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20061529_20061684_20063337_20063443_20064541
transcript_126939.nic	chr22	+	2016	7	NIC	ENSG00000183597.16	novel	3509	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	12	junction_5	29.590257405662	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	-12	True	NA	27	True	AATAAA	-24	NA	20021095	20065926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20063337_20063443_20064541
transcript_12694.known	chr1	-	2902	14	FSM	ENSG00000131788.16	ENST00000393045.7	2902	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_13	60.7170174911264	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-4	True	NA	-5	True	AATAAA	-15	NA	145859081	145848521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145858966
transcript_126940.nic	chr22	+	2099	7	NIC	ENSG00000183597.16	novel	3509	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	10	junction_4	30.0776772152815	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	-12	True	NA	27	True	AATAAA	-24	NA	20021095	20065926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20061529_20061684_20063337_20063443_20064541
transcript_126944.known	chr22	+	568	6	FSM	ENSG00000183597.16	ENST00000411907.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	27.6159374275073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGATGTGCTCAACAATG	4042	False	NA	NA	False	NA	NA	NA	20021068	20061656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529
transcript_126946.known	chr22	+	1859	6	FSM	ENSG00000183597.16	ENST00000420290.6	1859	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	33.4149667065523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	4042	False	NA	26	True	AATAAA	-23	NA	20021068	20065925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20063337_20063443_20064541
transcript_126948.nic	chr22	+	2297	6	ISM	ENSG00000183597.16	ENST00000399807.7	2241	8	13	2684	0	-205	5prime_fragment	FALSE	canonical	3	24	junction_1	26.1793811997152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAGAAGAGGAAAAAG	-6	True	NA	NA	False	AAAAAG	-15	NA	20021101	20063178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20055942_20056014_20061529
transcript_12695.nic	chr1	-	3021	14	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	-62	0	intron_retention	FALSE	canonical	3	285	junction_7	23.6167626759033	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	NA	False	NA	-5	True	AATAAA	-15	NA	145859898	145848521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145859664
transcript_126964.known	chr22	+	4506	14	FSM	ENSG00000128191.16	ENST00000351989.8	4506	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	13.4714249409937	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	9	True	NA	14	True	CATAAA	-16	NA	20080240	20111872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
transcript_126975.known	chr22	-	2928	13	FSM	ENSG00000099899.15	ENST00000403707.7	2928	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	38.3905370284571	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	8937	False	NA	-10	True	AATAAA	-15	NA	20117392	20111874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882_20116973_20117096
transcript_126991.known	chr22	-	2886	12	FSM	ENSG00000099899.15	ENST00000252136.12	2886	12	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_9	33.4942945678072	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	-7	True	NA	-10	True	AATAAA	-15	NA	20117226	20111874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_126998.known	chr22	-	2473	12	FSM	ENSG00000099899.15	ENST00000439169.2	2473	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	63.7581950655485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGAGGGCCAGAATA	-3	True	NA	NA	False	NA	NA	NA	20117222	20112337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113562_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_127021.known	chr22	-	2498	12	FSM	ENSG00000099899.15	ENST00000404751.7	2498	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.4607320308636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTTTCTGTGATGA	-26	True	NA	NA	False	AATAAA	-13	NA	20117245	20112303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112817_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_12704.nic	chr1	-	3178	13	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	-62	0	intron_retention	FALSE	canonical	3	285	junction_7	22.9496732002876	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	NA	False	NA	-5	True	AATAAA	-15	NA	145859898	145848521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145857007_145859664
transcript_127101.known	chr22	+	1132	6	FSM	ENSG00000099901.17	ENST00000402752.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	3	3265	junction_5	1863.16869874953	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	5	False	NA	19	True	AATAAA	-21	NA	20117423	20127355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_127112.known	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_1	3021.35320676018	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	0	True	NA	19	True	AATAAA	-21	NA	20116103	20127355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_127119.known	chr22	+	837	6	FSM	ENSG00000099901.17	ENST00000331821.7	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	3743	junction_5	1691.42964382205	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	22	True	NA	21	True	TATAAA	-12	NA	20117547	20127181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_127131.known	chr22	+	932	6	FSM	ENSG00000099901.17	ENST00000418705.2	932	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3130.82953863669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGAGAAGCAATAAATC	204	False	NA	-17	True	NA	NA	NA	20117952	20127035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20118314_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_127150.known	chr22	+	584	4	FSM	ENSG00000099901.17	ENST00000411892.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	7072	junction_2	733.568447158591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGCGGGTTATGTGCAA	31	True	NA	NA	False	GGGGCT	-14	NA	20117556	20125488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307
transcript_127153.known	chr22	+	529	2	FSM	ENSG00000099901.17	ENST00000467920.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	7620	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTGTTGTTTTGAGA	127	False	NA	NA	False	TATAAA	-19	NA	20117652	20119529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20117665_20119012
transcript_127157.known	chr22	-	1944	2	FSM	ENSG00000040608.14	ENST00000043402.8	1944	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCCTCTCAGGCTAG	-16	True	NA	-6	True	AATAAA	-16	NA	20268318	20241414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20243111_20268070
transcript_127160.known	chr22	-	1973	2	FSM	ENSG00000040608.14	ENST00000425986.1	1973	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGGCCTCTCAGGCT	8585	False	NA	-8	True	AATAAA	-14	NA	20243684	20241416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20243111_20243405
transcript_127162.known	chr22	-	1172	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	41.9702275428666	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGGTAGGGCCCCCA	-20	True	NA	25	True	NA	NA	NA	20320060	20314237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
transcript_127167.known	chr22	-	935	4	FSM	ENSG00000128185.10	ENST00000443409.1	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	293.456413572215	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGTTCTGGTCTCA	875	False	NA	NA	False	NA	NA	NA	20320080	20314393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20314825_20315335_20315477_20319638_20319800_20319878
transcript_127174.known	chr22	+	3744	6	FSM	ENSG00000185252.19	ENST00000437275.5	3744	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	72.7120347672928	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	220	False	NA	30	True	AATAAA	-41	NA	20394402	20408455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20395332_20395419_20399594_20399691_20400631_20400759_20401276_20401373_20405376
transcript_127178.known	chr22	+	3714	6	FSM	ENSG00000185252.19	ENST00000611540.4	3714	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	57.6957537432349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTTTGTTCATGT	NA	False	NA	36	True	AATAAA	-26	NA	20394114	20408461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394335_20394562_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_127180.known	chr22	+	3900	5	FSM	ENSG00000185252.19	ENST00000400451.7	3900	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	27.9463772249642	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	-4	True	NA	30	True	AATAAA	-41	NA	20394150	20408455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_127185.known	chr22	+	2788	5	FSM	ENSG00000185252.19	ENST00000357502.5	2788	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	64.0780773744032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTCCAGTGAACATTA	6	True	NA	19	True	AATAAA	-20	NA	20394160	20407681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394335_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_127191.known	chr22	+	2789	4	FSM	ENSG00000185252.19	ENST00000403682.7	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	49.2363912388207	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGGCGGCAT	NA	False	NA	NA	False	NA	NA	NA	20394127	20407407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20400631_20400759_20401276_20401373_20405376
transcript_127199.known	chr22	+	591	2	FSM	ENSG00000185252.19	ENST00000420626.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCTGCAGAGGAGTCAG	6	True	NA	NA	False	NA	NA	NA	20394188	20405493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20405376
transcript_127201.known	chr22	+	3758	4	FSM	ENSG00000185252.19	ENST00000493734.5	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	25.8370965001015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTTCCAGTGAACATT	5	True	NA	18	True	AATAAA	-19	NA	20394187	20407680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20395419_20400631_20400759_20401276_20401373_20405376
transcript_127204.nic	chr22	-	2582	7	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	12.8927197372091	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	NA	False	NA	-7	True	AATAAA	-27	NA	20495881	20441518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489213_20495759
transcript_127205.known	chr22	-	2528	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	7.47774475805818	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	10	True	NA	-7	True	AATAAA	-27	NA	20495795	20441518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
transcript_127209.nnic	chr22	-	2394	6	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	14.2884568795934	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-22	True	NA	-7	True	AATAAA	-27	NA	20495827	20441518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20488984_20489245_20495759
transcript_127211.known	chr22	-	1389	5	FSM	ENSG00000099910.17	ENST00000479601.5	1389	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	5.2618912949623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCCTTCTCCTGCCTAA	13	True	NA	NA	False	NA	NA	NA	20495792	20457789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
transcript_127214.nnic	chr22	-	1435	4	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	17.9876500843094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	11	True	NA	-7	True	AATAAA	-27	NA	20495847	20441518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20495759
transcript_127223.known	chr22	+	3351	18	FSM	ENSG00000099917.17	ENST00000263205.11	3351	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	79.9741740320632	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTGTTCATCACTGT	10	True	NA	27	True	AATAAA	-18	NA	20507609	20587619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20575112_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_127229.known	chr22	+	3210	17	FSM	ENSG00000099917.17	ENST00000406969.5	3210	17	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	73.280710285859	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	18	True	NA	25	True	AATAAA	-16	NA	20507617	20587617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20507736_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_12723.known	chr1	+	1473	8	FSM	ENSG00000186364.12	ENST00000334513.6	1473	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.91641053537726	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	10	True	NA	13	True	AATAAA	-22	NA	145845629	145848954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145845833_145846012_145846197_145846432_145846459_145846597_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_127249.known	chr22	+	2235	16	FSM	ENSG00000099917.17	ENST00000382974.6	2235	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	75.9126398492958	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTGGGATAGGCGCAG	-4	True	NA	NA	False	NA	NA	NA	20507640	20586867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_127268.known	chr22	-	6751	55	FSM	ENSG00000241973.11	ENST00000255882.11	6751	55	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	41.2686504373032	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	583	False	20858825	0	True	AATAAA	-26	NA	20858811	20707690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20708099_20709295_20709380_20709907_20709998_20710698_20710859_20711340_20711462_20712485_20712612_20712692_20712798_20713280_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297_20721419_20726487_20726542_20727229_20727398_20727773_20727865_20729312_20729507_20729631_20729712_20729891_20730012_20732970_20733099_20733735_20733844_20734042_20734195_20734394_20734554_20742227_20742356_20742607_20742765_20744627_20744721_20747582_20747703_20749904_20749995_20751292_20751377_20751673_20751756_20752902_20753028_20753109_20753181_20761303_20761387_20764816_20764951_20765099_20765237_20765584_20765694_20793192_20793244_20796145_20796315_20798583_20798688_20799092_20799277_20799670_20799767_20801972_20802106_20803190_20803321_20804299_20804401_20804973_20805166_20807361_20807459_20810966_20811033_20813357_20813507_20818482_20818550_20819640_20819901_20820538_20820612_20824325_20824415_20834561_20834656_20838614_20838732_20858569
transcript_127273.known	chr22	-	2301	17	FSM	ENSG00000241973.11	ENST00000485963.5	2301	17	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_10	18.8877233606912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGCTACAGATCAGTG	582	False	20858825	NA	False	AATAAA	-18	NA	20858812	20798477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20798688_20799092_20799277_20799670_20799767_20801972_20802106_20803190_20803321_20804299_20804401_20804973_20805166_20807361_20807459_20810966_20811033_20813357_20813507_20818482_20818550_20819640_20819901_20820538_20820612_20824325_20824415_20834561_20834656_20838614_20838732_20858569
transcript_127275.known	chr22	+	4259	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	17.2391270080593	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTAACCTCTTTTT	-1	True	NA	9	True	AATAAA	-19	NA	20859006	20891214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
transcript_127277.known	chr22	+	2037	4	FSM	ENSG00000099942.13	ENST00000411769.1	2037	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	287.590372269696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGTTTCAGTGTCT	-22	True	NA	23	True	AATAAA	-27	NA	20917433	20953747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20918246_20933778_20934245_20949710_20949928_20953205
transcript_127278.nnic	chr22	+	3271	4	NNC	ENSG00000099942.13	novel	2037	4	NA	NA	-16	-147	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	276.316646058266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCGAGTGTCTTTTCTT	6245	False	NA	15	True	ATTAAA	-19	NA	20917390	20953600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_20918246_20933778_20934245_20949710_20951266_20953205
transcript_127279.known	chr22	+	5342	3	FSM	ENSG00000099942.13	ENST00000354336.8	5342	3	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_1	29	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGTTTCAGTGTCT	-2	True	NA	23	True	AATAAA	-27	NA	20917406	20953747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20918246_20933778_20934245_20949710
transcript_127286.known	chr22	+	4282	21	FSM	ENSG00000099949.21	ENST00000646124.2	4282	21	0	0	0	0	multi-exon	FALSE	canonical	2	68	junction_18	15.947648729515	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	-13	True	NA	33	True	AATAAA	-34	NA	20982296	20999032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994270_20994557_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
transcript_127291.nic	chr22	+	4878	20	NIC	ENSG00000099949.21	novel	4282	21	NA	NA	-280	0	intron_retention	FALSE	canonical	2	68	junction_17	14.6856252855539	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	-6	True	NA	33	True	AATAAA	-34	NA	20981988	20999032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
transcript_127294.nic	chr22	+	4661	19	NIC	ENSG00000099949.21	novel	4282	21	NA	NA	-7	0	intron_retention	FALSE	canonical	2	68	junction_17	14.9026677535547	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	-20	True	NA	33	True	AATAAA	-34	NA	20982289	20999032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996967_20997231
transcript_127295.nic	chr22	+	5151	19	NIC	ENSG00000099949.21	novel	4282	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	74	junction_4	12.2692277922159	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	-11	True	NA	33	True	AATAAA	-34	NA	20982298	20999032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996802_20996885_20996967_20997231
transcript_127305.known	chr22	+	1660	3	FSM	ENSG00000099949.21	ENST00000493460.2	1660	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCGGATCACCTGAGGT	-13	True	NA	NA	False	NA	NA	NA	20982296	20987162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20982572_20983026_20983090_20985840
transcript_127306.known	chr22	+	4058	16	FSM	ENSG00000099949.21	ENST00000646506.1	4058	16	0	0	0	0	multi-exon	FALSE	canonical	2	68	junction_13	13.5787415551745	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCCTAAAAAGCAAATTTT	525	False	NA	17	True	AATAAA	-18	NA	20988030	20999016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
transcript_127307.known	chr22	-	1144	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	67.8877750408717	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	NA	False	NA	-5	True	AATAAA	-13	NA	21002196	20999776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
transcript_127308.known	chr22	-	2307	5	FSM	ENSG00000099960.13	ENST00000403586.5	2307	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.27760839478607	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGGCATTCTTTGT	387	False	NA	NA	False	NA	NA	NA	21032549	21028717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21029231_21029335_21029445_21029710_21030352_21030830_21031856_21032530
transcript_12731.known	chr1	-	3093	12	FSM	ENSG00000198483.13	ENST00000544626.2	3093	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	49.7399850794356	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTGTAATTTTTTTTT	-18	True	NA	-1	True	AATAAA	-18	NA	145885866	145866559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145866766_145867286_145867393_145867990_145868057_145868310_145868401_145871981_145873986_145874154_145874193_145874821_145875007_145876139_145876247_145876568_145876640_145876815_145876874_145877967_145877989_145885725
transcript_127310.nnic	chr22	-	1206	4	NNC	ENSG00000184436.12	novel	1144	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	105.325949108259	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	-27	True	NA	-5	True	AATAAA	-13	NA	21001798	20999776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_21000433_21000646_21000788_21001255_21001412_21001545
transcript_127311.known	chr22	-	1913	4	FSM	ENSG00000184436.12	ENST00000215742.9	1913	4	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_3	44.7908720859755	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	-7	True	NA	NA	False	NA	NA	NA	21002118	20999103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831
transcript_127313.known	chr22	-	1080	4	FSM	ENSG00000184436.12	ENST00000466670.1	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	69.108610172684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCACCAGAGCGGCAG	-6	True	NA	NA	False	NA	NA	NA	21002117	21000229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21001412_21001831_21001912_21002085
transcript_127315.known	chr22	-	1678	4	FSM	ENSG00000161149.12	ENST00000292748.7	1678	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCCTACCGCCTTATA	-1	True	NA	NA	False	NA	NA	NA	21014292	21008636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21009454_21011383_21011591_21013041_21013185_21013781
transcript_127316.known	chr22	-	1671	3	FSM	ENSG00000184436.12	ENST00000476667.5	1671	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	51	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCATAATAAAGCGGATT	5	True	NA	-30	True	NA	NA	NA	21002106	20999801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21001412_21001831
transcript_127317.known	chr22	-	1974	3	FSM	ENSG00000161149.12	ENST00000422086.5	1974	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGCTGAGATAGCTTTA	4	True	NA	NA	False	AAAAAG	-27	NA	21014287	21008192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21009454_21011383_21011591_21013781
transcript_127318.known	chr22	+	1263	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	6	0	5	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGAATTGCTTCTATA	NA	False	NA	24	True	ATTAAA	-33	NA	21001921	21003272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21002830_21002917
transcript_127319.known	chr22	+	2298	2	FSM	ENSG00000230513.3	ENST00000452284.1	2298	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGAAATAAGCCTGT	4	True	NA	-27	True	NA	NA	NA	21002207	21010342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21002830_21008666
transcript_127321.known	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-24	True	NA	-1	True	AATAAA	-17	NA	21001795	20999772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646
transcript_127322.known	chr22	+	1020	1	FSM	ENSG00000230513.3	ENST00000662660.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTTTTAAGAATTG	2	True	NA	16	True	ATTAAA	-25	NA	21002244	21003264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21002200_21003300
transcript_127323.known	chr22	-	1957	3	FSM	ENSG00000184436.12	ENST00000498406.1	1957	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	29	True	NA	NA	False	NA	NA	NA	21001742	20999103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21000788_21001255
transcript_127324.nnic	chr22	+	4797	3	NNC	ENSG00000169635.10	novel	6940	2	NA	NA	-818	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTCATACCCAAATTCA	NA	False	NA	NA	False	GATAAA	-22	NA	21416552	21449434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_21416738_21442758_21442858_21444921
transcript_127331.known	chr22	-	3872	11	FSM	ENSG00000183506.17	ENST00000480319.5	3872	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	49.9235415410405	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21490611	21477379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223
transcript_127336.known	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_1	195.254250202709	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	0	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
transcript_127339.known	chr22	+	3451	4	FSM	ENSG00000185651.15	ENST00000496722.1	3451	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1262.23250191432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	16	False	NA	16	True	AATAAA	-18	NA	21567729	21624034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21568378_21592860_21592957_21610856_21611044_21621514
transcript_127340.known	chr22	+	2932	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1376	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	NA	False	NA	16	True	AATAAA	-18	NA	21567546	21624034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21567772_21610856_21611044_21621514
transcript_127343.known	chr22	-	1410	5	FSM	ENSG00000161179.14	ENST00000415762.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	53.6400037285606	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-33	True	NA	0	True	AATAAA	-20	NA	21630064	21628088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629542_21629762_21629850
transcript_127344.known	chr22	-	1309	5	FSM	ENSG00000161179.14	ENST00000292778.11	1309	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	51.0538930934753	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	9	True	NA	0	True	AATAAA	-20	NA	21630022	21628088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629601_21629762_21629850
transcript_127346.known	chr22	-	1494	4	FSM	ENSG00000161179.14	ENST00000473985.1	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	5.79271573232759	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATAACGTGTGTCTT	-7	True	NA	-25	True	NA	NA	NA	21630038	21628113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629188_21629307_21629762_21629850
transcript_127348.nic	chr22	-	1274	4	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	65.6370491584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	2500	False	NA	0	True	AATAAA	-20	NA	21630106	21628088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21628788_21629307_21629408_21629542_21629762_21629850
transcript_127349.known	chr22	-	1066	4	FSM	ENSG00000161179.14	ENST00000398873.4	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	64.88108781113	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAATGCAAACACCTTC	-4	True	NA	-78	True	NA	NA	NA	21630035	21628166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629307_21629408_21629601_21629762_21629850
transcript_127353.known	chr22	-	1613	3	FSM	ENSG00000161179.14	ENST00000464015.5	1613	3	0	0	0	0	multi-exon	TRUE	canonical	3	223	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	19	True	NA	0	True	AATAAA	-20	NA	21630012	21628088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629762_21629850
transcript_127356.nic	chr22	-	1794	3	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	-42	0	intron_retention	FALSE	canonical	3	106	junction_1	58.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	2500	False	NA	0	True	AATAAA	-20	NA	21630106	21628088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21629408_21629542_21629762_21629850
transcript_127359.nic	chr22	-	1929	2	NIC	ENSG00000161179.14	novel	1613	3	NA	NA	-42	0	intron_retention	FALSE	canonical	3	223	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	2500	False	NA	0	True	AATAAA	-20	NA	21630106	21628088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21629762_21629850
transcript_127360.known	chr22	-	1423	2	FSM	ENSG00000161179.14	ENST00000468686.5	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	0	True	NA	0	True	AATAAA	-20	NA	21630031	21628088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629307
transcript_127362.known	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	64	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	-18	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21642524_21642861_21643059_21643893
transcript_127363.known	chr22	+	601	2	FSM	ENSG00000128228.5	ENST00000466935.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGCTCTTCCTCTGGTGG	34	False	NA	NA	False	NA	NA	NA	21642353	21643292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21642524_21642861
transcript_127378.known	chr22	+	2692	21	FSM	ENSG00000100023.20	ENST00000679827.1	2692	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	59.4099318296192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCATCAGGTAAATTAAA	-25	True	NA	-11	True	ATTAAA	-28	NA	21665999	21697873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21694967_21695393_21695497_21696746
transcript_127381.known	chr22	+	3343	21	FSM	ENSG00000100023.20	ENST00000680094.1	3343	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	49.6327512838045	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGACCAAGGGCTGG	3	True	NA	NA	False	TTTAAA	-38	NA	21666027	21697578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695487_21695866
transcript_127382.known	chr22	+	3875	21	FSM	ENSG00000100023.20	ENST00000406385.1	3875	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_20	47.9784066013035	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAGTCATAAGACTAC	15	True	NA	NA	False	TATAAA	-20	NA	21666039	21698276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696030
transcript_127383.known	chr22	+	4929	21	FSM	ENSG00000100023.20	ENST00000335025.12	4929	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	45.09819841191	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAATTTAGAGTGTATC	-16	True	NA	NA	False	AATAAA	-20	NA	21666008	21700015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
transcript_127386.known	chr22	+	2625	21	FSM	ENSG00000100023.20	ENST00000626352.2	2625	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_19	59.5786035418757	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGAGGGCATCAGGTA	-3	True	NA	7	True	ATTAAA	-21	NA	21666021	21697866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695397_21695497_21696884
transcript_127387.known	chr22	+	3381	21	FSM	ENSG00000100023.20	ENST00000680434.1	3381	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	58.859557422733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTATAAATTACAAAAAAA	7	True	NA	NA	False	GATAAA	-9	NA	21666031	21698248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670854_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
transcript_127389.known	chr22	+	4068	20	FSM	ENSG00000100023.20	ENST00000398831.8	4068	20	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_19	26.8978780738434	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATTTTCAATTCTAAT	-13	True	NA	23	True	ATTAAA	-15	NA	21666011	21697907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_12739.known	chr1	-	796	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	972.490699184316	1200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGAACTCTATGTAT	8835	False	NA	70	True	NA	NA	NA	145927460	145925641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
transcript_12740.known	chr1	-	3991	6	FSM	ENSG00000271601.4	ENST00000604000.4	3991	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	8.43800924389159	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTGACTCTTTCTTG	6559	False	145958033	-3	True	ATTAAA	-21	NA	145958017	145933422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145936553_145936907_145936986_145937603_145937700_145942712_145942854_145947618_145947783_145957635
transcript_127403.known	chr22	-	4297	5	FSM	ENSG00000100027.17	ENST00000339468.8	4297	5	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_3	11.7553179455087	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGCCCTCAGTGGACGAG	12	True	NA	-5	True	AATAAA	-24	NA	21735794	21697535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21701219_21703369_21703479_21703838_21703883_21710627_21710909_21735614
transcript_127417.nnic	chr22	-	2513	2	Antisense	novelGene_ENSG00000283871.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCGGAGGGGCCGGGC	1192	False	NA	NA	False	NA	NA	NA	21656433	21652183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr22_-_21654607_21656343
transcript_127421.known	chr22	-	5881	9	FSM	ENSG00000100030.15	ENST00000215832.11	5881	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	78.9509341300025	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTTATTTCACTAAA	-4	True	NA	-4	True	AGTAAA	-18	NA	21867645	21759656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21764241_21769194_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_127423.known	chr22	-	1487	8	FSM	ENSG00000100030.15	ENST00000398822.7	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	68.942448640078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATATATTCTCCTAGG	474	False	NA	-17	True	ATTAAA	-14	NA	21867680	21769039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_127437.nic	chr22	-	2945	19	NIC	ENSG00000100038.20	novel	3061	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_14	46.2707077432551	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	21982822	21957030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_127440.nic	chr22	-	3061	19	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_18	67.623252812828	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-1	True	NA	NA	False	ATTAAA	-16	NA	21982813	21957030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21975980_21976188_21982729
transcript_127456.known	chr22	-	3107	18	FSM	ENSG00000100038.20	ENST00000398793.6	3107	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	58.3808638126876	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	2	True	NA	NA	False	ATTAAA	-16	NA	21982750	21957030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982413
transcript_127457.known	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_13	45.6548659181792	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-10	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_127469.nic	chr22	-	3840	18	NIC	ENSG00000100038.20	novel	4163	17	NA	NA	-9	0	intron_retention	FALSE	canonical	3	97	junction_13	46.9907596011096	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGAGCTGGGGCCCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	21982822	21957031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_12748.known	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	4.32049379893857	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-10	True	NA	-2	True	ATTAAA	-19	NA	145918717	145911349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
transcript_127486.nic	chr22	-	3758	17	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	74	junction_12	46.2140062643351	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGAGCTGGGGCCCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	21982822	21957031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_127489.known	chr22	-	4163	17	FSM	ENSG00000100038.20	ENST00000444502.5	4163	17	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_12	48.2920396519965	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-13	True	NA	NA	False	ATTAAA	-16	NA	21982790	21957030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21958694_21959131_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_127491.nnic	chr22	-	2509	16	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_11	54.1169104809208	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	21982822	21957030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_127508.known	chr22	-	5149	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	16.6034174008773	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCCGAGTCCTGC	0	True	NA	-12	True	AATAAA	-15	NA	21952848	21919424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_127517.known	chr22	-	1778	7	FSM	ENSG00000100034.14	ENST00000397495.8	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	15.5071668019088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	17	True	NA	NA	False	AATAAA	-26	NA	21952831	21924875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_12752.known	chr1	-	3607	4	FSM	ENSG00000272031.3	ENST00000606888.3	3607	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTCACTTCTGCC	1	True	NA	-11	True	AATAAA	-15	NA	145964575	145959440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145961880_145962420_145962969_145963309_145963538_145964183
transcript_127525.nic	chr22	+	3646	10	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	-55	7802	-55	-7802	5prime_fragment	FALSE	canonical	3	63	junction_6	203.418257917821	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGTTTTTAATGTAT	NA	False	NA	14	True	AATAAA	-22	NA	22298068	22321320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105_22307246_22307532_22307592_22308696_22308820_22309735_22309884_22310225_22310402_22318898
transcript_12753.known	chr1	+	1178	8	FSM	ENSG00000121851.13	ENST00000369314.2	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	14.0581881144486	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTGGGTGAGGCC	-1	True	NA	20	True	AATAAA	-16	NA	145964689	145978848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977083_145977153_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_127533.nnic	chr22	+	745	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5155	-3054	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	209.640615101177	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTGTGCTTTTCCTT	NA	False	NA	26	True	ATTAAA	-20	NA	22298068	22307347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22306904_22307105
transcript_127534.nnic	chr22	+	866	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5155	-3051	at_least_one_novel_splicesite	FALSE	canonical	3	318	junction_3	92.1764612034981	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTTTCCTTTCA	NA	False	NA	29	True	ATTAAA	-23	NA	22298068	22307350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105
transcript_127536.nic	chr22	+	823	5	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	-55	21772	-55	-21772	5prime_fragment	FALSE	canonical	3	232	junction_3	127.295915095497	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTTTCCTTTCA	NA	False	NA	29	True	ATTAAA	-23	NA	22298068	22307350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105
transcript_12754.known	chr1	-	2905	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_5	3.97953950776689	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGAGATGGCTTTGG	-3	True	NA	NA	False	AATAAA	-23	NA	145996579	145992434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
transcript_127543.known	chr22	-	5309	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTGTATTGTTTT	32	True	NA	NA	False	AATAAA	-18	NA	22508742	22484420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
transcript_127545.known	chr22	-	2148	2	FSM	ENSG00000169548.3	ENST00000302097.3	2148	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTGTCTTTGGCTTTT	0	True	NA	NA	False	AATAAA	-15	NA	22520270	22513735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_22515702_22520088
transcript_127546.known	chr22	+	3170	3	FSM	ENSG00000128266.9	ENST00000615612.2	3170	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCATTGTCCCAGTGT	-6	True	NA	29	True	AATAAA	-15	NA	23070518	23125032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23070571_23095246_23096419_23123086
transcript_127548.known	chr22	-	1188	7	FSM	ENSG00000100218.12	ENST00000216036.9	1188	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.5723301886761	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGGTCCGAATGGCACT	2	True	NA	0	True	AATAAA	-18	NA	23141990	23059414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23059719_23061808_23061946_23063901_23064134_23134025_23134145_23138839_23138943_23140221_23140473_23141948
transcript_127553.known	chr22	+	4990	11	FSM	ENSG00000100228.14	ENST00000263116.8	4990	11	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_9	3.6	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGATTTGACCAGCTA	-16	True	NA	NA	False	NA	NA	NA	23145476	23165663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23145552_23146604_23146686_23150062_23150155_23152460_23152527_23153032_23153135_23155967_23156033_23157991_23158044_23158897_23158980_23159162_23159254_23160878_23160999_23161499
transcript_127556.known	chr22	+	2239	1	FSM	ENSG00000230701.2	ENST00000426721.2	2239	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGACGTGACTTGGC	8116	False	NA	NA	False	AATAAA	-35	NA	23262766	23265005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23262800_23265000
transcript_127557.known	chr22	-	2309	3	FSM	ENSG00000133519.13	ENST00000433168.6	2310	3	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCAGTCCTGTTTTT	-4	True	NA	-6	True	AATAAA	-24	NA	23402726	23390605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23391725_23399759_23400584_23402360
transcript_127562.known	chr22	+	1077	4	FSM	ENSG00000280623.1	ENST00000626825.1	1077	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	11.5854314646552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAACAGTGATTTTAG	23	False	NA	NA	False	AATGAA	-1	NA	23536898	23547167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23537137_23538760_23538839_23544227_23544307_23546485
transcript_127564.known	chr22	+	976	2	FSM	ENSG00000280623.1	ENST00000629869.1	976	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATCAAGTAGAAAGG	5	True	NA	19	True	NA	NA	NA	23536880	23539480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23537137_23538760
transcript_127566.known	chr22	+	3935	1	FSM	ENSG00000280623.1	ENST00000627127.1	3935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCTTTCTTTATACT	6848	False	NA	10	True	NA	NA	NA	23543862	23547797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23543900_23547800
transcript_127579.known	chr22	-	3350	12	FSM	ENSG00000228315.12	ENST00000445682.2	3350	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.8469042206033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-10	True	NA	1	True	AATAAA	-20	NA	23717356	23638486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23638943_23659864_23660001_23683724_23683868_23690235_23690357_23694118_23695518_23700725_23700846_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_12758.known	chr1	-	1874	5	FSM	ENSG00000264343.7	ENST00000362074.7	1874	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.5190060335083	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGTAATTTATTCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	146229026	146155351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189382_146228708
transcript_127597.known	chr22	-	2055	10	FSM	ENSG00000228315.12	ENST00000422506.5	2055	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.6626010212795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-10	True	NA	1	True	AATAAA	-20	NA	23717356	23638486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23638943_23659864_23660001_23683724_23683868_23695172_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_127608.known	chr22	-	567	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTGAGGGTCATAAG	-22	True	NA	-17	True	NA	NA	NA	23754425	23752742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23753199_23754314
transcript_12761.known	chr1	+	668	2	FSM	ENSG00000287978.1	ENST00000660431.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTTTGTTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	146387201	146388092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_146387323_146387545
transcript_127611.known	chr22	+	681	6	FSM	ENSG00000169314.15	ENST00000305199.9	681	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.06939798987516	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	NA	False	NA	6	True	AATAAA	-13	NA	23763206	23765861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764403_23764638_23764714_23764792_23764903_23765720
transcript_127614.known	chr22	-	700	4	FSM	ENSG00000250479.9	ENST00000484558.3	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_3	46.5212018570267	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23	True	NA	-3	True	ATTAAA	-19	NA	23767972	23765833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23766027_23766127_23766276_23767373_23767594_23767833
transcript_127626.known	chr22	+	2261	8	FSM	ENSG00000099953.10	ENST00000215743.8	2261	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	9.46960766810089	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTTGGTCTCCTT	4	True	NA	15	True	ATTAAA	-16	NA	23772848	23784316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23772979_23779186_23779417_23780358_23780503_23780581_23780716_23780858_23781101_23781192_23781410_23782225_23782484_23783410
transcript_127629.nic	chr22	+	3214	7	ISM	ENSG00000099953.10	ENST00000215743.8	2261	8	-26	0	-23	0	intron_retention	TRUE	canonical	3	32	junction_1	10.1721296797781	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTTGGTCTCCTT	-1	True	NA	15	True	ATTAAA	-16	NA	23772822	23784316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_23772979_23779186_23779417_23780358_23780503_23780581_23780716_23780858_23781101_23781192_23781410_23782225
transcript_127640.known	chr22	+	1730	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	0	0	0	0	multi-exon	TRUE	canonical	3	1419	junction_5	182.281333040441	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786930	23834540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_127642.known	chr22	+	1717	9	FSM	ENSG00000099956.20	ENST00000344921.11	1717	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	599.383016109065	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTCAACAGGTCATG	-20	True	NA	18	True	AATAAA	-19	NA	23786962	23834505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801136_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_127650.known	chr22	+	5191	9	FSM	ENSG00000099956.20	ENST00000644036.2	5191	9	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	502.716853084318	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTCCCACGAAATCTG	-17	True	NA	NA	False	AATAAA	-20	NA	23786965	23838009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_127671.known	chr22	-	1063	7	FSM	ENSG00000099958.15	ENST00000406855.7	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	21.4786715914493	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_127675.known	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	25.0044440494529	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_127682.known	chr22	-	969	6	FSM	ENSG00000099958.15	ENST00000476077.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	8.22192191643779	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-12	True	NA	-30	True	AATAAA	-15	NA	23839012	23836733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_127699.known	chr22	+	1500	8	FSM	ENSG00000099956.20	ENST00000263121.12	1500	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	755.983910853523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATTTCTTCAACAGGT	28	True	NA	14	True	AATAAA	-15	NA	23787010	23834501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_1277.known	chr1	-	796	2	FSM	ENSG00000205090.9	ENST00000624426.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCATGTGTGTGGCGTCT	6507	False	NA	-5	True	AATAAA	-16	NA	1540350	1539055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1539791_1540289
transcript_127700.known	chr22	+	2388	13	FSM	ENSG00000133460.20	ENST00000398356.6	2388	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	10.9579372551995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	23856871	23885536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23877720_23877870_23882458_23882647_23882758_23882870_23883771_23883874_23883948_23884025_23884301_23884430_23884648
transcript_127704.known	chr22	+	1555	12	FSM	ENSG00000133460.20	ENST00000316185.9	3088	12	88	1445	2	-66	multi-exon	FALSE	canonical	2	2	junction_9	11.2499770431354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAAGCCAGCTACTGTC	53	False	NA	NA	False	NA	NA	NA	23857962	23884867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23858030_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23877720_23877870_23882458_23882647_23882758_23882870_23883771_23883874_23883948_23884025_23884301_23884430_23884648
transcript_127718.known	chr22	+	1048	8	FSM	ENSG00000133460.20	ENST00000405286.6	1048	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.67217764560615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATGGTGTTAAAATGC	0	True	NA	24	True	ATTAAA	-15	NA	23856950	23882951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23882458_23882647_23882758
transcript_12772.known	chr1	-	5343	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	46.7926385279583	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	12	True	NA	-14	True	AATAAA	-19	NA	147172470	147155105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
transcript_127730.known	chr22	+	742	5	FSM	ENSG00000133460.20	ENST00000423972.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	10.3077640640442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCGAATCCTCTATCCA	269	False	NA	NA	False	ATTAAA	-21	NA	23857416	23877287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23857532_23862103_23862203_23868480_23868642_23875120_23875242_23877041
transcript_127731.known	chr22	+	730	5	FSM	ENSG00000133460.20	ENST00000405847.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.7819293264239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGTATCAGTCAACAC	-1	True	NA	NA	False	NA	NA	NA	23856933	23877328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23856992_23862103_23862203_23868480_23868642_23875116_23875242_23877041
transcript_127733.known	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	21305	junction_2	1533.5	7852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	-22	True	NA	20	True	AATAAA	-15	NA	23894382	23895223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23894583_23894771_23894945_23895039
transcript_127736.known	chr22	+	589	2	FSM	ENSG00000240972.2	ENST00000465752.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	24372	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	9	False	NA	24	True	AATAAA	-19	NA	23894449	23895227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23894583_23894771
transcript_127737.known	chr22	+	435	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	21305	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	235	False	NA	24	True	AATAAA	-19	NA	23894697	23895227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23894945_23895039
transcript_127744.nnic	chr22	-	552	4	NIC	ENSG00000224205.2	novel	699	5	NA	NA	1	-57	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAACCTGCTGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	23991420	23976928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_23977068_23977400_23977578_23987318_23987470_23991335
transcript_127746.known	chr22	+	1582	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	248	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGATGCAATTATCAAT	-8	True	NA	NA	False	AATAAA	-18	NA	23966887	23972556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23967023_23967385_23967562_23971285
transcript_127751.known	chr22	-	565	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	53	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	5493	False	NA	-18	True	AATAAA	-24	NA	23974441	23971369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23971624_23973767_23973944_23974306
transcript_127752.known	chr22	-	699	5	FSM	ENSG00000224205.2	ENST00000437021.2	699	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTGTCCCACACTTGCT	NA	False	NA	NA	False	NA	NA	NA	23991421	23976871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23977068_23977400_23977578_23987318_23987470_23989126_23989216_23991335
transcript_127753.known	chr22	-	333	2	FSM	ENSG00000099977.15	ENST00000428792.1	333	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	6751	False	NA	-18	True	AATAAA	-24	NA	23973183	23971369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23971624_23973104
transcript_127769.known	chr22	+	7233	37	FSM	ENSG00000099991.18	ENST00000263119.10	7233	37	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_25	9.59307073740413	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	-4	True	NA	13	True	AATAAA	-13	NA	24011303	24178628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
transcript_127770.nic	chr22	+	1654	10	ISM	ENSG00000099991.18	ENST00000398319.6	7480	37	-63	122324	7	0	5prime_fragment	FALSE	canonical	3	18	junction_4	9.41629792788369	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	4	True	NA	NA	False	NA	NA	NA	24011354	24056304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_127773.known	chr22	+	1321	9	FSM	ENSG00000099991.18	ENST00000454754.5	1321	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	12.3129758791285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	1515	False	NA	NA	False	NA	NA	NA	24011191	24056304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_127775.known	chr22	+	1472	9	FSM	ENSG00000099991.18	ENST00000445422.5	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	11.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTTCCAGGAGCTTC	-13	True	NA	NA	False	AAAAAG	-8	NA	24011415	24056318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_127777.nic	chr22	+	2623	9	NIC	ENSG00000099991.18	novel	2422	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.9687194226713	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGCCTCTTTGCTCA	-22	True	NA	12	True	AATAAA	-12	NA	24155801	24178627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24156077_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
transcript_127781.known	chr22	+	3172	15	FSM	ENSG00000099994.11	ENST00000358321.4	3172	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	3.63444406663101	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTCCTGGTGTTCAT	0	True	NA	12	True	AAAACA	-18	NA	24181486	24189106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24181596_24183056_24183268_24183494_24183647_24184135_24184304_24184765_24184941_24185093_24185296_24185485_24185572_24185660_24185930_24186015_24186160_24186256_24186416_24187201_24187451_24187570_24187844_24187958_24188136_24188224_24188328_24188411
transcript_127786.known	chr22	+	6763	17	FSM	ENSG00000100014.20	ENST00000314328.14	6763	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	61.5522834162145	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTTGTTGGTTTT	-21	True	NA	26	True	GATAAA	-15	NA	24270830	24417738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
transcript_127788.known	chr22	+	6674	16	FSM	ENSG00000100014.20	ENST00000437398.5	6674	16	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	26.0856708217792	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTTTGTTGGTTTTT	-35	True	NA	27	True	GATAAA	-16	NA	24270816	24417739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
transcript_127798.known	chr22	+	2565	7	FSM	ENSG00000100014.20	ENST00000421374.5	2565	7	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	30.2145108626082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTGGAGGAAATAA	-30	True	NA	NA	False	AAGAAA	-17	NA	24270821	24330401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255
transcript_127803.known	chr22	+	6204	20	FSM	ENSG00000258555.6	ENST00000358654.2	6204	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	112.970885862826	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	46	True	NA	29	True	AATAAA	-36	NA	24270897	24442356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24343481_24343604_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533_24414745_24433130_24433737_24440582
transcript_127804.known	chr22	-	1367	6	FSM	ENSG00000178803.12	ENST00000650766.1	1367	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCAGTTTCTTCATT	8864	False	NA	NA	False	TTTAAA	-13	NA	24494800	24438269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24438759_24441991_24442141_24460452_24460772_24471767_24471896_24474982_24475154_24494689
transcript_127806.nnic	chr22	+	2834	4	NIC	ENSG00000128271.22	novel	2412	3	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.8884444373331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	6003	False	NA	29	True	AATAAA	-36	NA	24423609	24442356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24423958_24432620_24432727_24433130_24433737_24440582
transcript_127807.known	chr22	+	2412	3	FSM	ENSG00000128271.22	ENST00000611543.4	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	5990	False	NA	29	True	AATAAA	-36	NA	24423596	24442356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24423629_24433130_24433737_24440582
transcript_127809.known	chr22	+	1517	3	FSM	ENSG00000128271.22	ENST00000444262.6	1517	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGAGGGAGTGCCCA	34	False	NA	NA	False	GGGGCT	-2	NA	24424408	24441345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24424557_24433130_24433737_24440582
transcript_127810.nnic	chr22	+	2592	3	NNC	ENSG00000128271.22	novel	1517	3	NA	NA	140	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	174	False	NA	29	True	AATAAA	-36	NA	24424548	24442356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_24424761_24433130_24433737_24440582
transcript_127815.nnic	chr22	-	3359	6	NNC	ENSG00000138867.17	novel	3435	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	79.8358315545094	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-49	True	NA	-7	True	AATAAA	-20	NA	24555191	24540437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_24543098_24543841_24543955_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_127818.known	chr22	-	3435	6	FSM	ENSG00000138867.17	ENST00000435822.6	3435	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	22.6980175345778	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	4	True	NA	-7	True	AATAAA	-20	NA	24555138	24540437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_127819.known	chr22	-	1606	6	FSM	ENSG00000138867.17	ENST00000404664.7	1606	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	67.5822461893654	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGAGCCCTGGCCG	-4	True	NA	NA	False	NA	NA	NA	24555935	24542397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
transcript_127823.nnic	chr22	-	3403	5	NIC	ENSG00000138867.17	novel	3435	6	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	81.4812094902868	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-49	True	NA	-7	True	AATAAA	-20	NA	24555191	24540437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24554948
transcript_127827.known	chr22	-	895	5	FSM	ENSG00000138867.17	ENST00000447813.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	89.8150878193636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTCTCCCCACAGACC	53	True	NA	NA	False	NA	NA	NA	24555089	24542686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543098_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_127829.known	chr22	-	865	5	FSM	ENSG00000138867.17	ENST00000402766.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	87.2868833216079	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCAGCTGCGCCCACAG	17	True	NA	NA	False	NA	NA	NA	24555125	24542755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543101_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_127839.nic	chr22	+	2566	17	NIC	ENSG00000100031.19	novel	2630	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	28.7967011999639	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	8355	False	NA	30	True	NA	NA	NA	24603143	24629001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610337_24610454_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_12784.known	chr1	+	2967	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	122.156450288585	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	-37	True	NA	27	True	AATAAA	-15	NA	147242683	147295762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_127842.nic	chr22	+	2338	17	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	29.4063662325014	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	8377	False	NA	30	True	NA	NA	NA	24603165	24629001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603322_24607953_24608024_24609964_24610034_24610249_24610337_24610454_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_127852.known	chr22	+	2630	16	FSM	ENSG00000100031.19	ENST00000400382.6	2630	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	24.9849732617205	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	-9	True	NA	25	True	AATAAA	-44	NA	24603192	24628996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_127856.nic	chr22	+	2576	16	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	26.9554364749591	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	8355	False	NA	30	True	NA	NA	NA	24603143	24629001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603528_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_127858.nic	chr22	+	2456	16	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-18	0	intron_retention	FALSE	canonical	3	21	junction_1	25.7937115506	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	8377	False	NA	30	True	NA	NA	NA	24603165	24629001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603322_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_127863.nic	chr22	+	2348	16	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6884251789243	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	8377	False	NA	30	True	NA	NA	NA	24603165	24629001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603322_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_127878.nic	chr22	+	2279	15	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	29.4556913872691	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	8377	False	NA	30	True	NA	NA	NA	24603165	24629001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603322_24607953_24608024_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_12789.known	chr1	+	2862	22	FSM	ENSG00000131778.20	ENST00000650721.1	2862	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.4083996946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	-44	True	NA	-11	True	AATATA	-40	NA	147242676	147295724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_1279.known	chr1	-	1284	5	FSM	ENSG00000160075.12	ENST00000291386.4	1284	5	0	0	0	0	multi-exon	FALSE	canonical	3	1597	junction_2	89.6730171233242	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCTGGTCCTGAATTC	-8	True	NA	-5	True	AATAAA	-16	NA	1574863	1541672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1542168_1543868_1543988_1544862_1545003_1564772_1564917_1574477
transcript_12790.known	chr1	+	2841	22	FSM	ENSG00000131778.20	ENST00000651420.1	2841	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	156.228610327325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	-20	True	NA	25	True	AATAAA	-13	NA	147242700	147295760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_127906.known	chr22	-	1828	5	FSM	ENSG00000178026.13	ENST00000446942.5	1828	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	57.9929952666699	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAACCTCAGGGTCACT	2	True	NA	-5	True	AATAAA	-29	NA	24593066	24585619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24586412_24588213_24588330_24588678_24589266_24589820_24589950_24592862
transcript_12791.known	chr1	+	2827	22	FSM	ENSG00000131778.20	ENST00000652616.1	2827	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	152.878384520228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	-48	True	NA	-11	True	AATATA	-40	NA	147242672	147295724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_127914.known	chr22	-	1417	5	FSM	ENSG00000178026.13	ENST00000404045.6	1417	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.6705562909677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACACCCGCCTCTGC	4	True	NA	-34	True	NA	NA	NA	24593064	24585648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24586412_24588213_24588330_24589820_24589950_24592216_24592424_24592862
transcript_127915.known	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	39.1606378338703	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	2	True	NA	18	True	ATTAAA	-14	NA	24555998	24574971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
transcript_127916.nnic	chr22	+	778	4	NNC	ENSG00000100028.12	novel	3466	4	NA	NA	0	-2837	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	1069.24646363689	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTCTTT	10	True	NA	-15	True	AATAAA	-20	NA	24556006	24572134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_24556229_24557656_24557801_24567983_24568177_24571915
transcript_127919.known	chr22	-	1233	4	FSM	ENSG00000178026.13	ENST00000318753.13	1233	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	58.2466021898846	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTTTTCTGCATCACC	-5	True	NA	-20	True	AATAAA	-14	NA	24593073	24585634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24586412_24588213_24588330_24589820_24589950_24592862
transcript_12792.known	chr1	+	2461	21	FSM	ENSG00000131778.20	ENST00000650714.1	2461	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	161.127426281189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATCAGGATCTGGT	-23	True	NA	NA	False	AATAGA	-9	NA	147242697	147295585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_127924.known	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	16	True	NA	-1	True	AATAAA	-22	NA	24696003	24691121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24691562_24695846
transcript_127926.known	chr22	+	6701	25	FSM	ENSG00000167037.19	ENST00000400358.9	6701	25	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_11	4.44097086482474	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGGCAACATAATGAGA	-4	True	NA	NA	False	NA	NA	NA	24806210	24927578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24806345_24806440_24806485_24844896_24844973_24847633_24847797_24850279_24850433_24854995_24855064_24855284_24855431_24855548_24855681_24859715_24859841_24867092_24867161_24868375_24868540_24868722_24868856_24876576_24876716_24879461_24879527_24884052_24884199_24886599_24886729_24893430_24893614_24895222_24895292_24897971_24898560_24901832_24901958_24905104_24905188_24912642_24912753_24917657_24917755_24919825_24919994_24924185
transcript_127935.known	chr22	+	6510	8	FSM	ENSG00000197077.14	ENST00000637069.1	6510	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5720092819257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTATGAAAATAGCAAAT	-6	True	NA	-30	True	AATAAA	-38	NA	25111841	25197399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_25112463_25170819_25170939_25174239_25174490_25177347_25177523_25181698_25181824_25184976_25185120_25190701_25190785_25192405
transcript_127936.nic	chr22	+	2458	6	ISM	ENSG00000197077.14	ENST00000406486.8	7864	14	-70	155326	-56	-10558	5prime_fragment	FALSE	canonical	0	0	junction_1	8.51821577561874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGAAAGAGAACTCCAG	-11	True	NA	NA	False	NA	NA	NA	24952659	25039131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24952773_25014429_25014567_25025632_25025785_25027944_25029541_25032608_25032697_25038759
transcript_127938.nic	chr22	+	2307	5	ISM	ENSG00000197077.14	ENST00000358431.8	10732	13	-42	158317	-42	-10558	5prime_fragment	FALSE	canonical	3	10	junction_1	5.43139024560011	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGAAAGAGAACTCCAG	3	True	NA	NA	False	NA	NA	NA	24952673	25039131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24952773_25025632_25025785_25027944_25029541_25032608_25032697_25038759
transcript_12794.known	chr1	+	2358	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	128.062103464491	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGCTTTCTTTCCCT	-37	True	NA	30	True	AATAAA	-18	NA	147242683	147295765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_127941.nnic	chr22	-	902	4	NNC	ENSG00000233577.6	novel	426	3	NA	NA	-434	848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.46337971105226	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGCCTGGCACCCAG	NA	False	NA	NA	False	NA	NA	NA	25283108	25280437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_25280823_25281256_25281386_25282030_25282292_25282981
transcript_127944.known	chr22	-	1714	7	FSM	ENSG00000100068.14	ENST00000444995.7	1714	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	8.74960316560446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGACGATTATAATGAG	14	True	NA	NA	False	ATTAAA	-24	NA	25405377	25351456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_25351815_25354595_25354813_25357254_25357427_25359826_25360224_25375812_25376009_25381380_25381579_25405201
transcript_127946.nic	chr22	-	1944	7	NIC	ENSG00000100068.14	novel	1676	8	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	7.26674311886388	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGACGATTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	25405524	25351461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_25351903_25354595_25354813_25357254_25357427_25359826_25360224_25375812_25376009_25381380_25381579_25405201
transcript_127952.nnic	chr22	+	1036	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	2	-460	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	61.9883860089937	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTAACATCTATTTCT	-33	True	NA	16	True	AATAAA	-27	NA	25448081	25461208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_127953.nnic	chr22	+	1499	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	61.9883860089937	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	-26	True	NA	49	True	AATAAA	-24	NA	25448088	25461678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_127954.nnic	chr22	+	2099	6	NNC	ENSG00000100058.13	novel	977	6	NA	NA	2	5785	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	81.8545050684445	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTGTATTTCTTT	-33	True	NA	2	True	NA	NA	NA	25448081	25467463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25466058
transcript_127960.known	chr22	+	1364	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	25	0	6	0	multi-exon	FALSE	canonical	3	153	junction_1	31.6889176211495	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	-10	True	NA	49	True	AATAAA	-24	NA	25448104	25461678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_127972.known	chr22	+	9277	21	FSM	ENSG00000100077.16	ENST00000324198.11	9277	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_19	10.6596200682764	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGACTTCCGTGTGCTGT	16	True	NA	21	True	AATAAA	-18	NA	25564674	25729294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_25565154_25604376_25604454_25644591_25644666_25661575_25661678_25663629_25663705_25667738_25667801_25672295_25672348_25674436_25674529_25678815_25678916_25685169_25685249_25687536_25687668_25690188_25690284_25695106_25695215_25703509_25703577_25704108_25704210_25709897_25709965_25711067_25711164_25714407_25714571_25718244_25718382_25721283_25721398_25722288
transcript_127974.nic	chr22	+	2981	14	ISM	ENSG00000133454.16	ENST00000539302.5	7774	42	142587	-58	2443	0	3prime_fragment	FALSE	canonical	1	1	junction_10	2.02353022122552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTTCTCTATGGCC	4	True	NA	NA	False	AATAAA	-18	NA	25903620	26030644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_25903832_25908321_25908433_25910945_25911051_25921256_25921410_25946136_25946251_25947711_25947829_25950366_25950451_25952285_25952424_25955178_25955365_25992362_25992494_26003264_26003310_26004717_26004856_26026444_26027691_26030442
transcript_127975.known	chr22	+	8534	44	FSM	ENSG00000133454.16	ENST00000335473.12	8534	44	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2.3230218472874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATGCGACACACTGATAT	13	True	NA	NA	False	AATAAA	-20	NA	25742187	26031045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_25742294_25760983_25761132_25763230_25763390_25768114_25769429_25770109_25770177_25770871_25770985_25772333_25772511_25777582_25777782_25780055_25780199_25781733_25781835_25785427_25785492_25797952_25798098_25823504_25823679_25826408_25826500_25828775_25828969_25832916_25832998_25835295_25835444_25843734_25843895_25846099_25846284_25847429_25847653_25851469_25851580_25868319_25868386_25874285_25874415_25876188_25876333_25877958_25878049_25890755_25890876_25891303_25891413_25895155_25895281_25898306_25898462_25902612_25902737_25903630_25903832_25908321_25908433_25910945_25911051_25921256_25921410_25946136_25946251_25947711_25947829_25950366_25950451_25952285_25952424_25955178_25955365_25992362_25992494_26003264_26003310_26004717_26004856_26026444_26027691_26030442
transcript_127976.known	chr22	+	6584	17	FSM	ENSG00000100095.19	ENST00000248933.11	6584	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	4.93077073082901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTGTAGAATTTTT	0	True	NA	18	True	AATAAA	-15	NA	26169461	26383596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887_26297081_26298983_26299170_26305978_26306145_26310669_26310837_26311767_26311963_26313763_26313903_26340435_26340633_26347718_26347914_26351051_26351244_26365371_26365567_26373450_26373484_26375574_26375690_26377672_26377776_26380265
transcript_127977.known	chr22	+	3444	17	FSM	ENSG00000100095.19	ENST00000404234.7	3444	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	5.57897840110535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGGGTTTGGATGTT	12	False	NA	33	True	TTTAAA	-8	NA	26169473	26380471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887_26297081_26298983_26299170_26305978_26306145_26310669_26310837_26311767_26311963_26313763_26313903_26340435_26340633_26347718_26347914_26351051_26351244_26365371_26365567_26373450_26373484_26375577_26375690_26377672_26377776_26380265
transcript_127981.nic	chr22	+	1801	4	ISM	ENSG00000100095.19	ENST00000404234.7	3444	17	-264	83212	-252	-54197	5prime_fragment	FALSE	canonical	3	18	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTATTACTGAGCTGCAGT	57	False	NA	NA	False	AATAAA	-23	NA	26169209	26297259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887
transcript_12799.known	chr1	+	1822	12	FSM	ENSG00000131778.20	ENST00000652587.1	1822	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	161.523889694834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGCATAATAATAAATT	NA	False	NA	-5	True	NA	NA	NA	147242653	147295730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_127990.nic	chr22	-	3990	15	NIC	ENSG00000100099.21	novel	5066	14	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	42.2925308212373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-2	True	NA	-20	True	AATAAA	-36	NA	26483854	26452082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466050_26466105_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_127991.nic	chr22	-	3899	15	NIC	ENSG00000100099.21	novel	3786	14	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	40.86519650894	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-2	True	NA	-20	True	AATAAA	-36	NA	26483854	26452082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466050_26466105_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_128.known	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2494	junction_10	2994.81247326106	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_128005.known	chr22	-	5066	14	FSM	ENSG00000100099.21	ENST00000398145.7	5066	14	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_13	28.2379994933178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAACTGACTCACAG	10	True	NA	NA	False	AATAAA	-35	NA	26483783	26450881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_128007.known	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_13	25.3624611950383	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-2	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_128009.known	chr22	-	3936	14	FSM	ENSG00000100099.21	ENST00000439453.5	3936	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	39.3143905176609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	16	False	NA	-20	True	AATAAA	-36	NA	26483836	26452082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470923_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_128029.known	chr22	-	6136	13	FSM	ENSG00000100099.21	ENST00000466781.5	6136	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_12	36.8995445620795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	15	True	NA	-20	True	AATAAA	-36	NA	26483837	26452082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483744
transcript_128034.known	chr22	+	3370	4	FSM	ENSG00000128203.7	ENST00000215906.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	7.48331477354788	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGGTGAGGTCATCT	-22	True	NA	11	True	AATAAA	-21	NA	26429259	26445015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26429487_26433391_26434502_26442458_26442573_26443096
transcript_128042.known	chr22	-	2896	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	50.0309237705375	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-30	True	NA	-60	True	NA	NA	NA	26512499	26491985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
transcript_128044.known	chr22	-	3539	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_10	17.3193297697535	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGCATTAAAGAGTCAT	-4	True	NA	NA	False	AATAAA	-21	NA	26512473	26491239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
transcript_128049.known	chr22	+	4020	7	FSM	ENSG00000100104.13	ENST00000215917.11	4020	7	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_6	20.5236990384829	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCTAACTCATTCCTA	-14	True	NA	7	True	AATAAA	-17	NA	26483876	26494658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024_26491071_26491462
transcript_12805.known	chr1	-	2331	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	6.12244844812923	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGGCTCACAGTCAT	12	True	NA	-5	True	AATAAA	-15	NA	147225339	147186260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
transcript_128053.known	chr22	-	2974	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	17.6051364210098	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	92	False	NA	-1	True	AATAAA	-26	NA	26512377	26491926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
transcript_128054.known	chr22	+	981	2	FSM	ENSG00000261188.2	ENST00000565764.2	1663	2	26	656	8	-656	multi-exon	FALSE	canonical	3	40	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAGAAGGGACCTTT	16	True	NA	NA	False	NA	NA	NA	26512554	26513912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26513035_26513411
transcript_128055.known	chr22	+	2032	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGACTTTGCTACTTCTT	-2	True	NA	22	True	AGTAAA	-18	NA	26512536	26514568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26512500_26514600
transcript_128079.known	chr22	-	1968	7	FSM	ENSG00000128294.16	ENST00000398110.6	1968	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	158.726966832987	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-1	True	NA	16	True	AATAAA	-43	NA	26565368	26525745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26565223
transcript_12808.known	chr1	+	662	6	FSM	ENSG00000131778.20	ENST00000492728.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_5	14.8243043681651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACATGTACAGCTGTCC	25	True	NA	NA	False	NA	NA	NA	147242745	147260046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836
transcript_128082.known	chr22	-	5653	7	FSM	ENSG00000128294.16	ENST00000338754.9	5653	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_6	38.1910402523361	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTTCTCATCAGGAT	-21	True	NA	-12	True	AATAAA	-18	NA	26590132	26521995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
transcript_128089.nic	chr22	-	1836	6	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_5	156.384909757943	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-26	True	NA	16	True	AATAAA	-43	NA	26590137	26525745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26590052
transcript_12809.known	chr1	+	2212	3	FSM	ENSG00000180867.11	ENST00000649713.1	2212	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGGATTTCTCGCGTG	-2	True	NA	NA	False	NA	NA	NA	147172743	147179126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147173560_147174423_147174586_147177892
transcript_1281.known	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1754	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-2	True	NA	-5	True	AATAAA	-31	NA	1574584	1560847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1564917_1574477
transcript_12810.known	chr1	+	2505	18	FSM	ENSG00000131778.20	ENST00000361293.10	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	176.100317431026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	-40	True	NA	18	True	AATAAA	-6	NA	147242680	147295753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_128100.known	chr22	-	1041	6	FSM	ENSG00000100122.7	ENST00000647684.1	1041	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	9.01997782702375	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	0	True	NA	-1	True	AATAAA	-22	NA	26618027	26599277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26617976
transcript_128105.known	chr22	+	809	6	FSM	ENSG00000196431.4	ENST00000354760.4	809	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.748331477354788	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	2	True	NA	6	True	AATAAA	-18	NA	26621962	26630669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26621987_26622584_26622636_26623233_26623353_26625480_26625623_26628287_26628431_26630339
transcript_128109.nic	chr22	+	4206	5	NIC	ENSG00000225783.9	novel	594	4	NA	NA	8	27	intron_retention	FALSE	canonical	2	9	junction_1	6.97764286847643	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTCTAATTCAAATTC	10001	False	NA	NA	False	NA	NA	NA	26657233	26670626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_26657355_26663315_26663399_26665530_26666938_26667184_26667311_26668157
transcript_12811.known	chr1	+	2717	21	FSM	ENSG00000131778.20	ENST00000650828.1	2717	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	182.985136008365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	-23	True	NA	18	True	AATAAA	-6	NA	147242697	147295753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147255812_147255928_147256530_147256563_147259836_147259919_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_128115.nic	chr22	+	4064	4	NIC	ENSG00000225783.9	novel	594	4	NA	NA	2	0	intron_retention	FALSE	canonical	2	9	junction_1	7.84573486395988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	9990	False	NA	NA	False	NA	NA	NA	26657222	26670599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_26657355_26663315_26663399_26665530_26666938_26668157
transcript_128117.known	chr22	+	944	1	FSM	ENSG00000225783.9	ENST00000656640.1	944	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	3	True	NA	NA	False	NA	NA	NA	26646438	26647382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26646400_26647400
transcript_128121.known	chr22	-	7814	2	FSM	ENSG00000169184.6	ENST00000302326.5	7814	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTATATTTGTGGGTG	-14	True	NA	-9	True	AATAAA	-18	NA	27801756	27748276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27751097_27796762
transcript_128125.known	chr22	-	2914	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	255.754983470993	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-10	True	NA	-1	True	AATAAA	-19	NA	27919256	27851668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_128126.known	chr22	-	2963	11	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	213.034363425246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	831	False	NA	-2	True	AATAAA	-18	NA	27919306	27851669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896635_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_12813.known	chr1	+	6189	10	FSM	ENSG00000116128.12	ENST00000234739.8	6189	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	25.8318398612504	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAACTGCCTTTTTTGTTC	-19	True	NA	21	True	AATAAA	-21	NA	147541500	147626216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147541675_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623841
transcript_128134.known	chr22	+	4146	6	FSM	ENSG00000235954.8	ENST00000659843.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	5.65685424949238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCTAGCGAAAGCAGAAA	-43	True	NA	-35	True	TTTAAA	-15	NA	27919422	28002641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27997985_27998153_27998603_27998839_27999429
transcript_128137.known	chr22	+	5064	5	FSM	ENSG00000235954.8	ENST00000454741.5	5064	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.73212459828649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCATTTGTTTGC	-45	True	NA	3	True	AATAAA	-15	NA	27919420	28002679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27994472_27994654_27997410_27998839_27999429
transcript_128138.known	chr22	+	746	5	FSM	ENSG00000235954.8	ENST00000452612.5	746	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.15475321515004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCAGGACTGGATGGTA	25	True	NA	NA	False	NA	NA	NA	27919490	27999476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27998603_27998839_27999429
transcript_12814.known	chr1	+	6117	10	FSM	ENSG00000116128.12	ENST00000683836.1	6117	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	36.5476181858918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGTCAGAAAAATAAAATAT	-19	True	NA	-15	True	ATTAAA	-31	NA	147541500	147626180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147541675_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623877
transcript_128141.known	chr22	+	807	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	52	163	19	53	multi-exon	FALSE	canonical	3	10	junction_2	58.6912827144429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGATAAGTGTCTGGC	52	False	NA	NA	False	NA	NA	NA	27919517	27986229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
transcript_128142.known	chr22	+	3733	4	FSM	ENSG00000235954.8	ENST00000417497.6	3733	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.65383665716478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATATGGTTTTTTTTTTT	NA	False	NA	-81	True	NA	NA	NA	27919387	28002595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27999429
transcript_128143.known	chr22	+	4790	4	FSM	ENSG00000235954.8	ENST00000453632.6	4790	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAACCCATATGGTTTT	-43	True	NA	-88	True	NA	NA	NA	27919422	28002588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27998839_27999429
transcript_128144.known	chr22	+	898	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	22	0	3	0	multi-exon	FALSE	canonical	3	98	junction_2	18.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	-40	True	NA	22	True	AATAAA	-30	NA	27919425	27924963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27922017_27922179_27924346
transcript_128146.known	chr22	+	874	3	FSM	ENSG00000235954.8	ENST00000454996.7	894	3	7	13	2	-13	multi-exon	FALSE	canonical	3	11	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	-26	True	NA	NA	False	ATTAAA	-8	NA	27919439	27986379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27985691
transcript_128148.known	chr22	-	766	3	FSM	ENSG00000180957.19	ENST00000471825.1	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_2	58.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTATTTTAGAATTT	2	True	NA	NA	False	NA	NA	NA	27919244	27910447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27911110_27914316_27914348_27919171
transcript_128149.known	chr22	-	2826	11	FSM	ENSG00000180957.19	ENST00000320996.14	2826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	312.237665889303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-9	True	NA	-2	True	AATAAA	-18	NA	27919255	27851669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27853664_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_128150.known	chr22	+	846	2	FSM	ENSG00000235954.8	ENST00000419253.1	846	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	NA	False	NA	NA	False	ATTAAA	-21	NA	27919400	27986392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27985691
transcript_128151.known	chr22	-	1971	16	FSM	ENSG00000183765.23	ENST00000382580.6	1971	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_14	188.991169693778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGATGGAACCTGG	-17	True	NA	-22	True	NA	NA	NA	28741838	28687762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402_28734728_28741768
transcript_128154.known	chr22	-	1844	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_14	98.0335219635173	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	1	True	NA	-2	True	ATTAAA	-18	NA	28741820	28687742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_128161.known	chr22	-	1771	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	161.571791433351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-13	True	NA	-2	True	ATTAAA	-18	NA	28741834	28687742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_128167.known	chr22	+	1106	6	FSM	ENSG00000100209.11	ENST00000216027.8	1106	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	36.0743676313252	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	-16	True	NA	6	True	AATAAA	-17	NA	28742038	28757510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744705_28745863_28746009_28751240_28751289_28757077
transcript_128169.known	chr22	+	792	6	FSM	ENSG00000100209.11	ENST00000420442.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	47.4552420708187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	6	True	NA	3	True	AATAAA	-15	NA	28742060	28757213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_128172.known	chr22	+	563	6	FSM	ENSG00000100209.11	ENST00000483861.5	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	46.1536564098664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGGCTCACACCTGT	-7	True	NA	0	True	AATAAA	-12	NA	28742678	28757210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742729_28743881_28743979_28744614_28744705_28745863_28746009_28751240_28751289_28757077
transcript_128174.known	chr22	+	846	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	54.1279964528524	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	15	True	NA	6	True	AATAAA	-17	NA	28742700	28757510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_128175.known	chr22	+	955	5	FSM	ENSG00000100209.11	ENST00000398941.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	63.9623912936344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTCTTTTCTGGCTT	0	True	NA	11	True	AATAAA	-22	NA	28742054	28757515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28751240_28751289_28757077
transcript_128183.known	chr22	-	1224	12	FSM	ENSG00000183765.23	ENST00000649563.1	1224	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	179.897629291754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGGCTTTGTGCTTC	15	True	NA	-10	True	ATTAAA	-10	NA	28741806	28687750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28741768
transcript_128185.known	chr22	+	3964	5	FSM	ENSG00000159873.10	ENST00000249064.9	3964	5	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	22.7486263321547	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGAGATATTTGTATTA	-29	True	NA	27	True	AATAAA	-20	NA	28772694	28789295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28773035_28773724_28773779_28780947_28781173_28783507_28783646_28786088
transcript_128188.known	chr22	+	3766	4	FSM	ENSG00000159873.10	ENST00000421503.6	3766	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	263.131568273786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGTATTACTCCAC	-50	True	NA	33	True	AATAAA	-26	NA	28772673	28789301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28773035_28773724_28773779_28783507_28783646_28786088
transcript_128189.known	chr22	-	1131	6	FSM	ENSG00000100219.17	ENST00000344347.5	1131	6	0	0	0	0	multi-exon	TRUE	non_canonical	3	136	junction_2	611.524194124811	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGATCCAATACTGTTG	14	True	NA	-63	True	AATGAA	-28	NA	28800524	28795174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28795733_28796046_28796122_28796147_28796193_28797076_28797206_28799056_28799154_28800297
transcript_128194.known	chr22	-	1824	5	FSM	ENSG00000100219.17	ENST00000403532.7	1824	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	722.118584444411	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTTGATTTCTTCTA	38	False	NA	-10	True	ATTAAA	-16	NA	28800558	28794556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799041_28799154_28800297
transcript_128197.known	chr22	-	520	2	FSM	ENSG00000100219.17	ENST00000482720.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	1664	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCCTGTAATCCCAGC	-2	True	NA	NA	False	ATTAAA	-26	NA	28800569	28798905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28799154_28800297
transcript_128198.known	chr22	-	2173	2	FSM	ENSG00000100219.17	ENST00000484256.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	1674	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGTTTGATTTCTTC	3551	False	NA	-12	True	ATTAAA	-14	NA	28797045	28794558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28795733_28796046
transcript_1282.known	chr1	+	2101	1	FSM	ENSG00000215014.5	ENST00000366221.3	2101	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTAACCATGTGCCT	4	True	NA	NA	False	AATAAA	-25	NA	1574974	1577075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1575000_1577100
transcript_128203.known	chr22	+	6181	9	FSM	ENSG00000183762.13	ENST00000400335.9	6181	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	3.79967103839267	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGCCCTATGCTGTC	-10	True	NA	8	True	AATAAA	-23	NA	29073034	29146820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29073228_29094257_29094421_29098861_29098954_29121356_29121482_29125262_29125417_29137341_29137675_29138623_29138783_29140281_29140367_29141943
transcript_128209.nic	chr22	+	2193	16	NIC	ENSG00000186998.16	novel	2128	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	31.8995646086623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-39	True	NA	17	True	AATAAA	-23	NA	29205881	29259597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231457_29231509_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_128213.nic	chr22	+	2233	16	NIC	ENSG00000186998.16	novel	2128	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	30.7776253506053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-39	True	NA	17	True	AATAAA	-23	NA	29205881	29259597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29255270_29255362_29258816
transcript_128217.known	chr22	+	2128	15	FSM	ENSG00000186998.16	ENST00000334018.11	2128	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	13.6159045657223	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-25	True	NA	17	True	AATAAA	-23	NA	29205895	29259597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_128218.known	chr22	+	2118	15	FSM	ENSG00000186998.16	ENST00000404820.7	2118	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	31.6847513701426	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-9	True	NA	17	True	AATAAA	-23	NA	29205911	29259597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29255270_29255362_29258816
transcript_12822.known	chr1	-	6956	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	11.8769410369447	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTTGGCACCCAGG	-3	True	NA	NA	False	AATAAA	-23	NA	147670524	147642229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_128226.nnic	chr22	+	2057	14	NIC	ENSG00000186998.16	novel	2128	15	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_13	27.3744579260588	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-39	True	NA	17	True	AATAAA	-23	NA	29205881	29259597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29258816
transcript_128229.nic	chr22	+	2058	14	NIC	ENSG00000186998.16	novel	2128	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	27.6488975993897	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-39	True	NA	17	True	AATAAA	-23	NA	29205881	29259597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_29206140_29214925_29215040_29215526_29215631_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_12823.nic	chr1	-	1800	10	NIC	ENSG00000162836.12	novel	6956	10	NA	NA	-27	0	intron_retention	FALSE	canonical	3	23	junction_3	26.7004415740061	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	9714	False	NA	-2	True	AATAAA	-17	NA	147670551	147647367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_147647567_147648245_147648412_147650142_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_128252.known	chr22	-	1777	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_4	95.0911843092373	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-5	True	NA	-26	True	AATAAA	-19	NA	29267981	29259871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
transcript_128257.known	chr22	-	1555	7	FSM	ENSG00000100263.14	ENST00000413137.6	1555	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	264.886610961496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAGAATAAAAACCAG	-10	True	NA	-58	True	NA	NA	NA	29267945	29259903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29260238_29260325_29260614_29260701_29260869_29261199_29261426_29265478_29265669_29267425_29267578_29267747
transcript_128265.nic	chr22	-	3103	6	NIC	ENSG00000100263.14	novel	1777	7	NA	NA	-66	0	intron_retention	FALSE	canonical	3	439	junction_3	62.5683626124258	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	NA	False	NA	-26	True	AATAAA	-19	NA	29268047	29259871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29265669_29267425_29267578_29267747
transcript_12827.known	chr1	-	891	2	FSM	ENSG00000265107.3	ENST00000430508.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTGGGCATAGTCC	-5	True	NA	NA	False	NA	NA	NA	147773354	147758483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147759272_147773251
transcript_128280.known	chr22	-	999	3	FSM	ENSG00000100263.14	ENST00000493894.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	43	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCGGGCGGATCA	16	False	NA	NA	False	NA	NA	NA	29267960	29265034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29265669_29267425_29267578_29267747
transcript_128284.known	chr22	+	2207	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	0	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_8	822.803342144251	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	-10	True	NA	16	True	ATTAAA	-16	NA	29268272	29300336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_128285.known	chr22	+	2400	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	1373	junction_8	889.008849435707	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	-15	True	NA	57	True	AATAAA	-21	NA	29268267	29300521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_128286.known	chr22	+	1989	16	FSM	ENSG00000182944.18	ENST00000332035.10	1989	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1258.61669392322	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	-1	True	NA	16	True	ATTAAA	-16	NA	29268325	29300336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_128287.known	chr22	+	2189	18	FSM	ENSG00000182944.18	ENST00000414183.6	2189	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	1345.36162026176	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	0	True	NA	23	True	ATTAAA	-23	NA	29268315	29300343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29274264_29274283_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_128288.known	chr22	+	2267	15	FSM	ENSG00000182944.18	ENST00000331029.11	2267	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1189.11520227677	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	8	True	NA	61	True	AATAAA	-25	NA	29268290	29300525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288756_29292499_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_128298.known	chr22	+	2482	6	FSM	ENSG00000185340.15	ENST00000611648.2	2482	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.8598362844403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	19	True	NA	24	True	AGTAAA	-14	NA	29307057	29312785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29307187_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_1283.known	chr1	-	2124	1	FSM	ENSG00000228594.4	ENST00000422725.4	2124	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGTCTGTGTGTTAT	-4	True	NA	-3	True	NA	NA	NA	1600135	1598011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1598000_1600100
transcript_128302.nnic	chr22	+	1855	5	NIC	ENSG00000185340.15	novel	2925	6	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	58.0490094661399	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	237	False	NA	24	True	AGTAAA	-14	NA	29306999	29312785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_29307154_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_128306.known	chr22	+	2925	6	FSM	ENSG00000185340.15	ENST00000616432.4	2925	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	31.6834341573006	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	NA	False	NA	24	True	AGTAAA	-14	NA	29306581	29312785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_128307.known	chr22	+	1803	6	FSM	ENSG00000185340.15	ENST00000406549.7	1803	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	57.5013043330323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	-16	True	NA	24	True	AGTAAA	-14	NA	29307022	29312785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29312142
transcript_128308.known	chr22	+	3382	5	FSM	ENSG00000185340.15	ENST00000618518.3	3382	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	32.1510108705776	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	19	True	NA	24	True	AGTAAA	-14	NA	29307057	29312785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_128309.known	chr22	+	2483	6	FSM	ENSG00000185340.15	ENST00000621062.4	2483	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	54.6735767990352	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	13	True	NA	24	True	AGTAAA	-14	NA	29307051	29312785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29307154_29308058_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_128310.known	chr22	-	1431	3	FSM	ENSG00000100276.10	ENST00000216101.7	1431	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCCTGGGATTTCTGGG	-17	True	NA	NA	False	AATAAA	-17	NA	29315697	29312932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29313569_29313862_29313988_29315027
transcript_128311.known	chr22	-	1720	2	FSM	ENSG00000100276.10	ENST00000401450.3	1720	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCCTGGGATTTCTGGG	-12	True	NA	NA	False	AATAAA	-17	NA	29315692	29312932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29313988_29315027
transcript_128315.known	chr22	-	4165	23	FSM	ENSG00000100280.17	ENST00000357586.7	4165	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	172.246729868562	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCCCAGCCAGTGTG	-12	True	NA	2	True	AATAAA	-15	NA	29388570	29327679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29328896_29329711_29329721_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29339753_29339775_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_128328.known	chr22	-	3903	21	FSM	ENSG00000100280.17	ENST00000317368.11	3903	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	98.1407662493013	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCAATCACGGACACT	15	False	29388598	-32	True	AATAAA	-13	NA	29388583	29327864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334351_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_12833.nnic	chr1	+	1800	15	NNC	ENSG00000188092.15	novel	2160	14	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	78.1652161796292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTTTTGCCTTACGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	147928403	147993336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710_147992949_147993068
transcript_128330.known	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_9	32.125184824371	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	15	False	29388598	0	True	AATAAA	-13	NA	29388583	29327681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_12836.known	chr1	+	1954	14	FSM	ENSG00000188092.15	ENST00000488165.5	1954	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	74.830222037473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928392	147993339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943976_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_12837.known	chr1	+	2160	14	FSM	ENSG00000188092.15	ENST00000314163.12	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	40.9116525406817	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTTCCTTTTTTTTT	-1	True	NA	74	True	NA	NA	NA	147928419	147993592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_128372.known	chr22	-	560	4	FSM	ENSG00000100280.17	ENST00000473606.1	560	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	232.299136651191	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTCCCACTCTCCAGA	69	False	NA	NA	False	NA	NA	NA	29388529	29359672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29359960_29363000_29363107_29367206_29367268_29388423
transcript_128373.known	chr22	+	3795	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGTGGGTCTAGAGCG	0	True	NA	NA	False	NA	NA	NA	29480217	29491390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
transcript_128379.known	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_20	61.3722249881817	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
transcript_128385.known	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_19	54.6223498948301	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
transcript_128401.known	chr22	-	2013	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	1738	junction_4	173.270358930634	1676	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTTTCTTCATCT	-12	True	NA	NA	False	ATTAAA	-14	NA	29581113	29554807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
transcript_128411.known	chr22	-	4728	20	FSM	ENSG00000100296.14	ENST00000490103.6	4728	20	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_19	57.6151142066173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAG	-27	True	NA	NA	False	NA	NA	NA	29553757	29505878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
transcript_128412.known	chr22	-	2374	21	FSM	ENSG00000100296.14	ENST00000397873.6	2374	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	70.8387429306873	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGCCAATTAAAAAGC	-36	True	NA	-47	True	NA	NA	NA	29553766	29508357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553670
transcript_128416.known	chr22	+	1857	17	FSM	ENSG00000186575.19	ENST00000397789.3	1857	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	40.1043560601588	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCCCAGGACCTGCC	329	False	NA	NA	False	NA	NA	NA	29603998	29694811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683080_29694751
transcript_128419.known	chr22	+	5950	16	FSM	ENSG00000186575.19	ENST00000338641.10	5950	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_15	36.3571175975214	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGCCTTGGGCTTCCTC	24	True	NA	19	True	AATAAA	-18	NA	29603632	29698598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29694751
transcript_12842.known	chr1	+	2633	14	FSM	ENSG00000188092.15	ENST00000478307.5	2633	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	81.1061835975006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTCAGTTATGTCATT	NA	False	NA	3	True	AATAGA	-14	NA	147928392	147993521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968357_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_128425.known	chr22	+	5884	16	FSM	ENSG00000186575.19	ENST00000361452.8	5884	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	39.6700838864194	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTTGCCTTGGGCTT	8	True	NA	15	True	AATAAA	-14	NA	29603616	29698594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29636750_29636877_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
transcript_128427.known	chr22	+	1716	16	FSM	ENSG00000186575.19	ENST00000361676.8	1716	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.0058197026185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCCCAGGACCTGCC	329	False	NA	NA	False	NA	NA	NA	29603998	29694811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
transcript_128430.known	chr22	+	1845	15	FSM	ENSG00000186575.19	ENST00000353887.8	1845	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	42.9478207377563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCCCAGGACCTGCC	77	False	NA	NA	False	NA	NA	NA	29603746	29694811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
transcript_128431.nic	chr22	+	2071	14	ISM	ENSG00000186575.19	ENST00000403999.7	2999	16	-131	5592	-54	-5592	5prime_fragment	TRUE	canonical	3	135	junction_2	16.2804562109871	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTAGCCCCCTGTGCCC	NA	False	NA	NA	False	AAGAAA	-2	NA	29603501	29678323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195
transcript_128435.nnic	chr22	-	1040	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	91.8634251968045	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-12	True	NA	-23	True	TATAAA	-18	NA	29766987	29730955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766871
transcript_128436.nnic	chr22	-	983	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	90.3726851555392	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-32	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766948
transcript_128437.known	chr22	-	945	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	43.4722900247963	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-32	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
transcript_128438.nic	chr22	-	916	6	NIC	ENSG00000100319.13	novel	945	6	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_5	57.7047658343745	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	2876	False	NA	-23	True	TATAAA	-18	NA	29767055	29730955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766948
transcript_128439.known	chr22	-	2468	2	FSM	ENSG00000100319.13	ENST00000489010.1	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAACAAAAAT	-36	True	NA	NA	False	NA	NA	NA	29767011	29746166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29748572_29766948
transcript_128440.known	chr22	+	916	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	0	0	0	0	multi-exon	FALSE	canonical	3	9230	junction_1	0	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	-8	True	NA	10	True	AATAAA	-14	NA	29767368	29770413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29767549_29769677
transcript_128441.known	chr22	+	584	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	-3	True	NA	104	True	NA	NA	NA	29767373	29770027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29767608_29769677
transcript_128452.nic	chr22	-	2956	22	NIC	ENSG00000100325.15	novel	2823	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	101.228463457957	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	NA	False	NA	-21	True	AATAAA	-19	NA	29838304	29788610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29833540_29833615_29834488_29834551_29838177
transcript_128459.nic	chr22	-	2929	21	NIC	ENSG00000100325.15	novel	2823	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_19	81.2702128703992	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	NA	False	NA	-21	True	AATAAA	-19	NA	29838304	29788610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834441_29834551_29838177
transcript_128460.known	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_19	66.6039788601252	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-18	True	NA	-52	True	AAAAAG	-1	NA	29838276	29788641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
transcript_12847.known	chr1	+	1148	6	FSM	ENSG00000274372.5	ENST00000665117.1	1148	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.16619037896906	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACCTTTGGTATCTTT	NA	False	NA	1	True	AATAAA	-17	NA	148013202	148025928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_148013554_148016160_148016259_148019936_148020209_148021913_148021999_148024529_148024720_148025776
transcript_128470.known	chr22	-	2790	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_19	49.6908447845442	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-16	True	NA	-21	True	AATAAA	-19	NA	29838274	29788610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
transcript_128480.nic	chr22	-	2639	19	NIC	ENSG00000100325.15	novel	2790	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	85.3639268075222	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-24	True	NA	-21	True	AATAAA	-19	NA	29838282	29788610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29832244_29832343_29838177
transcript_128494.known	chr22	-	562	2	FSM	ENSG00000100325.15	ENST00000492821.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTGTGAGCATTAAT	-16	True	NA	NA	False	GATAAA	-28	NA	29838274	29834085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29834551_29838177
transcript_128498.known	chr22	+	8987	20	FSM	ENSG00000100330.16	ENST00000401950.7	8987	20	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	15.0388232580262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATCTCCTCCTTTTTCA	-8	True	NA	17	True	AATAAA	-19	NA	29883173	30030868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30025629
transcript_128500.known	chr22	+	4464	19	FSM	ENSG00000100330.16	ENST00000351488.7	4464	19	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_17	21.868927728629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCCCCGTGGGATCCCA	31	False	NA	NA	False	GGGGCT	-21	NA	29883212	30026495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022608_30022698_30025629
transcript_128501.known	chr22	+	5866	19	FSM	ENSG00000100330.16	ENST00000323630.9	5866	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	22.1983204792337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGCTAACACTTCCT	16	True	NA	29	True	AATAAA	-29	NA	29883197	30027858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29883360_29957035_29957089_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30025629
transcript_128504.known	chr22	-	902	5	FSM	ENSG00000227117.6	ENST00000429350.5	902	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	0	True	NA	NA	False	AATAAA	-27	NA	30080230	30008741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30009197_30018616_30018730_30040176_30040279_30050460_30050590_30080127
transcript_128510.nnic	chr22	-	4226	3	NNC	ENSG00000128342.5	novel	3871	3	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTCCGGAGTGTAC	2613	False	NA	NA	False	AATAAA	-14	NA	30246605	30240452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_30244062_30244754_30244934_30246167
transcript_128512.known	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	11.4938842433705	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-1	True	NA	-4	True	AATAAA	-16	NA	30289505	30285116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_128514.known	chr22	-	1972	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	15.8740157175177	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTACAGCTAGGGGC	-6	True	NA	0	True	AATAAA	-17	NA	30326941	30291989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_128524.nic	chr22	-	2794	8	NIC	ENSG00000099992.16	novel	1972	9	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	72	junction_7	11.1666412833502	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCGTGTACAGCTAGGG	NA	False	NA	-2	True	AATAAA	-15	NA	30326966	30291991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_128532.known	chr22	-	5090	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_4	114.969677161705	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATGATCATTAACTCT	9	True	NA	-33	True	AATAAA	-21	NA	30356894	30331987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
transcript_128550.known	chr22	+	4478	12	FSM	ENSG00000187860.11	ENST00000338306.8	4478	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	14.7978108722733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCAGAAATTATATTAAT	4	True	NA	NA	False	AATAAA	-36	NA	30357006	30378673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30357133_30361960_30362115_30365989_30366249_30369431_30369604_30370325_30370951_30371649_30371728_30372074_30372287_30373596_30373765_30373922_30374092_30375478_30375664_30376258_30376348_30376432
transcript_128554.known	chr22	+	4207	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.43775825476164	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGAACCATCCTAGGG	-7	True	NA	NA	False	AATAAA	-29	NA	30397017	30425303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_128584.known	chr22	-	1651	8	FSM	ENSG00000099999.15	ENST00000215798.10	1651	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	5.82745087267747	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTGCGGCTTTGTG	-6	True	NA	-80	True	NA	NA	NA	30387125	30378982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
transcript_128589.known	chr22	+	1759	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGGCACGGTGGCTG	10	False	NA	NA	False	AATAAA	-17	NA	30356634	30367096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30357133_30361960_30362115_30365989
transcript_128592.known	chr22	+	891	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	263	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	6	True	NA	30	True	AATAAA	-13	NA	30425775	30429053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30425947_30426716_30426845_30428461
transcript_128593.known	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	72.0324001173546	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	-2	True	NA	31	True	AATAAA	-14	NA	30425767	30429054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
transcript_128594.known	chr22	+	1733	11	FSM	ENSG00000100003.18	ENST00000405717.7	1733	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.59026461420325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACTTGTGAAAATTTAT	12	True	NA	6	True	ATTAAA	-20	NA	30397036	30416975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233
transcript_128598.known	chr22	-	2510	12	FSM	ENSG00000133488.15	ENST00000255858.12	2510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.48964798865985	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGCTGCG	-6	True	NA	NA	False	NA	NA	NA	30505695	30488901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30490247_30491572_30491743_30491833_30491974_30492048_30492156_30492473_30492558_30494149_30494211_30494865_30494962_30495253_30495443_30495582_30495643_30495927_30495972_30503676_30503753_30505557
transcript_128617.known	chr22	-	656	4	FSM	ENSG00000128242.13	ENST00000423299.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	88.624049908714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGCCTGGTGCCGACCAA	9750	False	NA	NA	False	NA	NA	NA	30564914	30555777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556094_30557261_30557402_30558278_30558389_30564824
transcript_128618.known	chr22	-	1909	4	FSM	ENSG00000128242.13	ENST00000406361.6	1909	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.7551809532703	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-1	True	NA	-3	True	AGTAAA	-27	NA	30574665	30554634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556094_30557261_30557402_30558278_30558389_30574465
transcript_128621.known	chr22	-	533	3	FSM	ENSG00000128242.13	ENST00000427899.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGACCCCGCCCGCTTGT	1	True	NA	NA	False	NA	NA	NA	30560773	30555736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556097_30557261_30557402_30560740
transcript_128622.known	chr22	-	851	3	FSM	ENSG00000128242.13	ENST00000431313.5	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	51	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGCTGGGAGCTGGAG	153	False	NA	NA	False	NA	NA	NA	30574511	30555431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556097_30557261_30557402_30574465
transcript_128625.known	chr22	-	2708	17	FSM	ENSG00000100029.18	ENST00000405677.5	2708	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	258.748482785407	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCATTTTGTGTCCATG	58	False	NA	-8	True	ATTAAA	-19	NA	30606988	30576631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30592131_30592399_30605413_30605518_30606808
transcript_128626.known	chr22	-	2760	17	FSM	ENSG00000100029.18	ENST00000402281.5	2760	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	258.621948991187	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGTGTCCATGAGCC	NA	False	NA	-4	True	ATTAAA	-23	NA	30607083	30576627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30592131_30592399_30605460_30605518_30606808
transcript_128646.known	chr22	-	1988	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	165.101035856279	3538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGCCCAGCCTGAT	-3	True	NA	NA	False	NA	NA	NA	30591858	30576834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_128648.known	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	179.202143299865	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	9	True	NA	-41	True	NA	NA	NA	30591880	30576664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_12868.known	chr1	+	1968	2	FSM	ENSG00000232265.8	ENST00000657111.1	1968	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTTGAGCATTC	524	False	NA	15	True	AGTAAA	-21	NA	148156195	148158546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_148156407_148156789
transcript_12869.known	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	1146	False	NA	-3	True	AATAAA	-16	NA	148459757	148432958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_148433644_148435145_148435355_148459601
transcript_128692.known	chr22	-	713	4	FSM	ENSG00000100029.18	ENST00000466614.1	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_3	19.6694913225759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCTCCATGAAGGCAC	-1	True	NA	NA	False	NA	NA	NA	30591890	30586997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30587396_30588020_30588175_30589190_30589271_30591809
transcript_128694.known	chr22	+	2192	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_7	39.0664498003082	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	-11	True	NA	NA	False	NA	NA	NA	30607173	30627271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_128695.known	chr22	+	1870	9	FSM	ENSG00000185339.9	ENST00000407817.3	1870	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	133.911759659113	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGGCCTGGTGCCTCA	-9	True	NA	24	True	ATTAAA	-24	NA	30607203	30627060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30612962_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_128700.nic	chr22	-	2332	3	NIC	ENSG00000167065.14	novel	1157	3	NA	NA	-1	-586	intron_retention	FALSE	canonical	1	6	junction_1	6.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTAAGTCCTTTCAGAC	-43	True	NA	NA	False	AAAAAG	-35	NA	30667886	30662030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_30663261_30663403_30664081_30667461
transcript_128702.known	chr22	-	3050	2	FSM	ENSG00000167065.14	ENST00000334679.4	3050	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAGAAAAAAAG	-32	True	NA	NA	False	AAAAAG	-16	NA	30667875	30661444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30664081_30667461
transcript_128703.known	chr22	+	2585	2	FSM	ENSG00000100036.13	ENST00000343605.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCATTTGTTGGT	-3	True	NA	20	True	AATACA	-16	NA	30635780	30647893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30637070_30646597
transcript_128705.known	chr22	+	2836	14	FSM	ENSG00000184792.16	ENST00000446658.6	2836	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	6.33857356137005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTACTGAATGGTCTTTC	11	True	NA	NA	False	AATACA	-45	NA	30694888	30906406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30695554_30741160_30741370_30870428_30870683_30887425_30887619_30888222_30888341_30889179_30889235_30889489_30889637_30890727_30890974_30893121_30893243_30893462_30893567_30893637_30893734_30893816_30894002_30905836_30906070_30906196
transcript_12871.known	chr1	-	820	2	FSM	ENSG00000274020.4	ENST00000614292.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATCATATGGAAGTGAAA	1063	False	NA	NA	False	NA	NA	NA	148459840	148434773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_148435355_148459601
transcript_128712.known	chr22	+	3248	12	FSM	ENSG00000184792.16	ENST00000535268.5	3248	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	6.78598458418964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCCTCAGTCTCTGT	-4	True	NA	15	True	AATAAA	-28	NA	30881680	30907824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30881803_30887425_30887619_30888222_30888341_30889179_30889235_30889489_30889637_30890727_30890974_30893121_30893243_30893462_30893567_30893637_30893734_30893816_30894002_30905836_30906070_30906196
transcript_128717.known	chr22	+	3580	13	FSM	ENSG00000184792.16	ENST00000437268.6	3580	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.43068140122072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCCTCAGTCTCTGT	0	True	NA	15	True	AATAAA	-28	NA	30822515	30907824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30822710_30870428_30870683_30887425_30887619_30888222_30888341_30889176_30889235_30889489_30889637_30890727_30890974_30893121_30893243_30893462_30893567_30893637_30893734_30893816_30894002_30905836_30906070_30906193
transcript_128723.known	chr22	-	5657	26	FSM	ENSG00000133422.14	ENST00000397641.8	5657	26	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_11	28.7506243410469	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGTTTTCTTAGTA	0	True	NA	0	True	TATAAA	-24	NA	30968774	30925129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
transcript_128738.known	chr22	+	4752	4	FSM	ENSG00000253352.10	ENST00000643077.1	4752	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	69.7344168175865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGGAGAGACTTGAAT	1873	False	NA	NA	False	AATGAA	-26	NA	30971438	30978722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972047_30972173_30972854_30973588_30975169
transcript_12874.known	chr1	+	3642	1	FSM	ENSG00000177144.8	ENST00000322209.5	3642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAAAATATAAAACTTTTA	NA	False	NA	NA	False	AATAAA	-34	NA	148748773	148752415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_148748800_148752400
transcript_128743.known	chr22	+	3308	3	FSM	ENSG00000253352.10	ENST00000540687.6	3308	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	12.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCTTTAAAAAAAAAAAAAAA	528	False	NA	51	True	GATAAA	-12	NA	30970093	30976058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972854_30973588_30975169
transcript_128744.known	chr22	+	5875	3	FSM	ENSG00000253352.10	ENST00000647354.1	5875	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	43	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATAAATACCCTTTTTT	736	False	NA	-4	True	NA	NA	NA	30970301	30978819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972854_30973602_30975169
transcript_128746.known	chr22	+	3419	3	FSM	ENSG00000253352.10	ENST00000643280.1	3419	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	51	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGCCCCTTGGTTTTT	287	False	NA	-10	True	NA	NA	NA	30969852	30975997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972923_30973588_30975169
transcript_128758.known	chr22	+	3296	21	FSM	ENSG00000183963.19	ENST00000333137.12	3296	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	21.079373804741	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	-1	True	NA	28	True	GATAAA	-18	NA	31081317	31104624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_128766.known	chr22	+	3560	20	FSM	ENSG00000183963.19	ENST00000489337.5	3560	20	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	25.4315658766087	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	1	True	NA	27	True	GATAAA	-17	NA	31081319	31104623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088453_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_128770.known	chr22	+	3130	20	FSM	ENSG00000183963.19	ENST00000347557.6	3130	20	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_19	18.2117431902523	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	0	True	NA	28	True	GATAAA	-18	NA	31081318	31104624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31104315
transcript_128776.known	chr22	+	3321	20	FSM	ENSG00000183963.19	ENST00000612341.4	3321	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.132943728605	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	12	False	NA	27	True	GATAAA	-17	NA	31084995	31104623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31085292_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_128798.known	chr22	+	3198	21	FSM	ENSG00000183963.19	ENST00000358743.5	3198	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	24.1604532242257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	0	True	NA	27	True	GATAAA	-17	NA	31081318	31104623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31100954_31104315
transcript_128799.known	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	12.9494208364699	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-17	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
transcript_12880.known	chr1	+	8824	17	FSM	ENSG00000178104.19	ENST00000529945.2	8824	17	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	20.3867872346282	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTTTTATTCTTAA	194	False	NA	10	True	AATAAA	-22	NA	148952340	148986477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_128800.known	chr22	-	500	5	FSM	ENSG00000198832.11	ENST00000460642.5	500	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	145.131621295981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGGGCGCCCGCGAAGC	10	True	NA	NA	False	NA	NA	NA	31107541	31105024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106047_31107376
transcript_128801.known	chr22	-	605	5	FSM	ENSG00000198832.11	ENST00000491958.5	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	138.221516053037	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-2	True	NA	NA	False	NA	NA	NA	31107553	31105000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106116_31107376
transcript_128804.known	chr22	-	334	4	FSM	ENSG00000198832.11	ENST00000469262.1	334	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	14.613540144522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACCCGCGAAGAGAT	227	False	NA	NA	False	NA	NA	NA	31107466	31105113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31105287_31105657_31105693_31105929_31105966_31107376
transcript_128805.known	chr22	+	2515	15	FSM	ENSG00000185133.14	ENST00000405300.5	2515	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.6837327590534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	17	True	NA	5	True	ATTAAA	-13	NA	31122993	31134696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124141_31124264_31124844_31124907_31125832_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_128806.known	chr22	+	2393	14	FSM	ENSG00000185133.14	ENST00000400294.6	2393	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.6334083223971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	17	True	NA	5	True	ATTAAA	-13	NA	31122993	31134696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124844_31124907_31125832_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_128808.known	chr22	+	2215	13	FSM	ENSG00000185133.14	ENST00000404390.7	2215	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.0213499897497	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	17	True	NA	5	True	ATTAAA	-13	NA	31122993	31134696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124844_31124907_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_128809.known	chr22	+	3348	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	11.5938201929591	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	-11	True	NA	6	True	ATTAAA	-14	NA	31122965	31134697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_12881.known	chr1	+	2746	17	FSM	ENSG00000178104.19	ENST00000479408.6	2746	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	41.4935518333873	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGCCAATAAAGTTTAT	NA	False	NA	-13	True	NA	NA	NA	148951936	148981746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_148952155_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_128827.known	chr22	-	2600	7	FSM	ENSG00000100078.4	ENST00000215885.4	2600	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	12.7638813323639	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-5	True	NA	-24	True	ATTAAA	-22	NA	31140508	31134806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
transcript_128828.nnic	chr22	-	2930	7	NNC	ENSG00000100078.4	novel	2600	7	NA	NA	14	0	intron_retention	FALSE	canonical	1	1	junction_5	34.4480284873702	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	9	True	NA	-24	True	ATTAAA	-22	NA	31140494	31134806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138800_31138891_31138980_31139840
transcript_128834.nic	chr22	-	2799	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	57	0	intron_retention	TRUE	canonical	3	62	junction_4	8.60232526704263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	52	False	NA	-24	True	ATTAAA	-22	NA	31140451	31134806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138800_31139840
transcript_128835.nnic	chr22	-	2503	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	29.0337734371542	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	NA	False	NA	-24	True	ATTAAA	-22	NA	31140546	31134806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138666_31138800_31139840
transcript_12884.nic	chr1	+	3436	13	ISM	ENSG00000178104.19	ENST00000529945.2	8824	17	-248	11932	-31	6775	5prime_fragment	FALSE	canonical	3	153	junction_7	17.0782512765993	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGAGTAATGCCAAAGA	-13	True	NA	NA	False	NA	NA	NA	148952092	148974545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513
transcript_128844.nnic	chr22	+	3351	8	NNC	ENSG00000138942.17	novel	2737	8	NA	NA	-20	0	intron_retention	FALSE	canonical	3	24	junction_2	64.9477026663196	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	-51	True	NA	-1	True	ATTAAA	-17	NA	31160161	31207012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_31160304_31176261_31176418_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_128846.known	chr22	+	2737	8	FSM	ENSG00000138942.17	ENST00000518626.5	2737	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	60.9472840130832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCTTGGACTTCTTG	-2	True	NA	0	True	ATTAAA	-18	NA	31160210	31207013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488_31204967_31205376
transcript_128850.known	chr22	+	3182	7	FSM	ENSG00000138942.17	ENST00000326132.11	3182	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_5	13.7436854187255	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGACTTCTTGTCTGTG	-31	True	NA	6	True	ATTAAA	-24	NA	31160181	31207019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_128854.nic	chr22	+	2947	6	NIC	ENSG00000138942.17	novel	3182	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	15	junction_1	62.7726054899747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	-27	True	NA	-1	True	ATTAAA	-17	NA	31160185	31207012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31160304_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_128861.nic	chr22	+	2537	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-32	-287	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	49.1933148123017	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTGACTCTGCGGCAC	889	False	NA	NA	False	ATTAAA	-20	NA	31212206	31277351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_128862.nic	chr22	+	2619	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-32	-205	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	49.1933148123017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCCAGCGGTCCACAT	889	False	NA	NA	False	NA	NA	NA	31212206	31277433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_128863.nic	chr22	+	2824	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	49.1933148123017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	889	False	NA	NA	False	ATTAAA	-19	NA	31212206	31277638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_128864.known	chr22	+	3667	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_15	21.3412485316321	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	22	True	NA	46	True	AATAAA	-25	NA	31212297	31280080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_128869.known	chr22	+	2657	15	FSM	ENSG00000182541.18	ENST00000406516.5	2657	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	63.244423808405	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	-2	True	NA	NA	False	ATTAAA	-19	NA	31212273	31277638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_128872.nic	chr22	+	3230	15	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	45.4367131069049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATGTGTGGTGGTTGTA	13	True	NA	7	True	AATAAA	-25	NA	31212288	31279734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_128873.nic	chr22	+	3630	15	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	45.4367131069049	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	-41	True	NA	46	True	AATAAA	-25	NA	31212234	31280080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_12888.nic	chr1	+	2691	8	ISM	ENSG00000178104.19	ENST00000529945.2	8824	17	-250	19594	-33	-887	5prime_fragment	FALSE	canonical	3	153	junction_7	11.6601536728068	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCGCCAGCTTCGTCT	55	False	NA	NA	False	AAGAAA	-3	NA	148952090	148966883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838
transcript_128895.known	chr22	+	1042	3	FSM	ENSG00000182541.18	ENST00000462625.1	1042	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCACTCCAGCAACAG	-37	True	NA	NA	False	NA	NA	NA	31212238	31259046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31212425_31225719_31225820_31258290
transcript_128896.known	chr22	-	2420	6	FSM	ENSG00000100100.13	ENST00000215912.10	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	1.89736659610103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCACATTGCCAAGTTT	-19	True	NA	-6	True	ATTAAA	-11	NA	31292488	31281599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31283289_31289314_31289394_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_128901.known	chr22	-	2374	5	FSM	ENSG00000100100.13	ENST00000441972.5	2374	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.33853912601566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTCCA	-3	True	NA	-19	True	NA	NA	NA	31292534	31281612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31283289_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_128916.known	chr22	-	2516	3	FSM	ENSG00000100105.18	ENST00000215919.3	2516	3	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_1	132	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	1	True	NA	-4	True	GATAAA	-17	NA	31345776	31340676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31341684_31342896_31342961_31344331
transcript_128917.known	chr22	+	1943	1	FSM	ENSG00000213888.3	ENST00000504184.3	1943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTGCTCTGAGTGTCC	14	False	NA	NA	False	AAAAAG	-21	NA	31346776	31348719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31346800_31348700
transcript_128918.known	chr22	+	1665	9	FSM	ENSG00000185721.13	ENST00000331457.9	1665	9	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_4	72.5017241174305	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACCTATTTTGGGAGAT	-5	True	NA	NA	False	NA	NA	NA	31399603	31434452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31399726_31400619_31400744_31403028_31403205_31411011_31411082_31420255_31420426_31423279_31423411_31426614_31426783_31427059_31427183_31433871
transcript_128921.known	chr22	+	4031	33	FSM	ENSG00000198089.16	ENST00000400288.7	4031	33	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	33.9695980804896	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGTTGAAAAAATTCAAT	16	True	NA	70	True	NA	NA	NA	31496535	31618588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_128926.known	chr22	+	4162	32	FSM	ENSG00000198089.16	ENST00000432498.5	4162	32	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	33.8955671040154	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACTTTTCATACAA	86	False	NA	33	True	ATTAAA	-18	NA	31496274	31618551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_128927.nic	chr22	+	4270	32	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	31.6202098205356	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	-5	True	NA	29	True	ATTAAA	-14	NA	31496183	31618547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_128934.known	chr22	+	4226	31	FSM	ENSG00000198089.16	ENST00000540643.5	4226	31	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	31.3450510004725	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACTTTTCATACAA	NA	False	NA	33	True	ATTAAA	-18	NA	31496138	31618551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_128937.known	chr22	+	3739	31	FSM	ENSG00000198089.16	ENST00000400289.5	3739	31	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	36.5809452523517	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCCACTTTTCATA	18	True	NA	30	True	ATTAAA	-15	NA	31496537	31618548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508258_31508377_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_128949.nic	chr22	+	3746	30	NIC	ENSG00000198089.16	novel	4226	31	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	33.6524871738263	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	153	False	NA	29	True	ATTAAA	-14	NA	31496440	31618547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31496638_31508254_31508377_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_128988.known	chr22	-	3647	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	26.0813660363292	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-26	True	NA	15	True	ATTAAA	-28	NA	31489842	31439366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_128989.nic	chr22	-	3556	19	NIC	ENSG00000184708.18	novel	3695	19	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_18	44.140243668461	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	6445	False	NA	15	True	ATTAAA	-28	NA	31489962	31439366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489904
transcript_128998.nic	chr22	-	1770	10	ISM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	14695	0	-9430	5prime_fragment	FALSE	canonical	3	158	junction_9	14.229164972073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTCTGAGTAAGTTGGA	-26	True	NA	NA	False	AATAAA	-15	NA	31489842	31454061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_129004.nic	chr22	-	2485	8	NIC	ENSG00000241878.12	novel	2669	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	177.852839879101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-5	True	NA	-1	True	AATAAA	-18	NA	31630838	31618490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
transcript_129005.known	chr22	-	1963	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	-217	612	-211	-126	multi-exon	FALSE	canonical	3	357	junction_6	21.5804144008934	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTCACCTCATCCTG	5	True	NA	NA	False	NA	NA	NA	31662432	31619102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_129010.known	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	19.192012227313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	10	True	NA	-1	True	AATAAA	-18	NA	31662215	31618490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
transcript_129012.known	chr22	-	2194	7	FSM	ENSG00000241878.12	ENST00000397500.5	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	176.731827605808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTGAATTTTTTCAA	2	True	NA	NA	False	NA	NA	NA	31630831	31618613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
transcript_129016.known	chr22	-	10827	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_8	22.3295628036019	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	5	True	NA	-8	True	AATAAA	-22	NA	31750132	31681346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
transcript_129017.nnic	chr22	-	4193	4	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-2	2278	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	39.3813266522205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTGAAGAAAACGTATG	-5	True	NA	NA	False	AATAAA	-5	NA	31750142	31714448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_31717292_31725537_31725611_31738386_31738912_31749390
transcript_129018.nnic	chr22	-	4174	4	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-67	2278	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	36.5543735033473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTGAAGAAAACGTATG	NA	False	NA	NA	False	AATAAA	-5	NA	31750207	31714448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_31717292_31725537_31725611_31738386_31738912_31749474
transcript_129019.nic	chr22	-	3643	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	-62	33102	-54	2278	5prime_fragment	FALSE	canonical	3	52	junction_3	17.2497987105808	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTGAAGAAAACGTATG	NA	False	NA	NA	False	AATAAA	-5	NA	31750194	31714448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_12902.known	chr1	+	918	3	FSM	ENSG00000274265.5	ENST00000667654.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	-2	True	NA	11	True	AATAAA	-34	NA	149175892	149251069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149176251_149177157_149177213_149250564
transcript_129021.nnic	chr22	-	1613	4	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-2	-302	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	39.3813266522205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGTGAAGAATTAAAAAG	-5	True	NA	NA	False	AAGAAA	-3	NA	31750142	31717028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_31717292_31725537_31725611_31738386_31738912_31749390
transcript_129023.nic	chr22	-	1063	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	-62	35682	-54	-302	5prime_fragment	FALSE	canonical	3	52	junction_3	17.2497987105808	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGTGAAGAATTAAAAAG	NA	False	NA	NA	False	AAGAAA	-3	NA	31750194	31717028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_129025.known	chr22	-	718	3	FSM	ENSG00000183530.14	ENST00000461722.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	39.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCTGCTGAAAAGACAG	14	True	NA	NA	False	NA	NA	NA	31750072	31716726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31717292_31725537_31725611_31749992
transcript_129029.known	chr22	+	5390	43	FSM	ENSG00000100150.20	ENST00000382112.8	5390	43	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	32.8857708272513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATAAAGAGCTCCACGT	-48	True	NA	-20	True	NA	NA	NA	31753970	31906989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_129030.known	chr22	+	6554	43	FSM	ENSG00000100150.20	ENST00000651528.2	6554	43	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_32	32.222590700841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTAGAACTTTTTGGT	0	True	NA	NA	False	TATAAA	-23	NA	31754018	31908033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_129031.known	chr22	+	5383	42	FSM	ENSG00000100150.20	ENST00000644331.1	5383	42	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	33.0553768954669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATAAAGAGCTCCACGT	NA	False	NA	-20	True	NA	NA	NA	31753911	31906989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_129032.known	chr22	+	6479	42	FSM	ENSG00000100150.20	ENST00000642696.1	6479	42	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_25	32.9739319821413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTAGAACTTTTTGGT	-18	True	NA	NA	False	TATAAA	-23	NA	31754000	31908033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_129035.known	chr22	+	5286	41	FSM	ENSG00000100150.20	ENST00000646969.1	5286	41	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_22	33.2380711684658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACATATCAGAAGCAAAT	-24	True	NA	-34	True	NA	NA	NA	31753994	31906975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_12904.known	chr1	+	1006	2	FSM	ENSG00000274265.5	ENST00000668239.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGCGTGATGGTATG	NA	False	NA	9	True	AATAAA	-32	NA	149175747	149251067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149176251_149250564
transcript_129040.known	chr22	+	1478	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	41.197694110229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	-75	True	NA	6	True	AATAAA	-20	NA	31753943	31784788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_129041.known	chr22	+	1278	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	13.8377879373836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	9	True	NA	NA	False	AATACA	-30	NA	31754027	31784504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_129043.known	chr22	+	1735	2	FSM	ENSG00000128245.15	ENST00000471374.1	1735	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	431	False	NA	46	True	AATAAA	-20	NA	31944965	31957603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31945236_31956138
transcript_129044.known	chr22	+	1751	2	FSM	ENSG00000128245.15	ENST00000248975.6	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	1939	junction_1	0	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	0	True	NA	46	True	AATAAA	-20	NA	31944534	31957603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31944821_31956138
transcript_129045.known	chr22	+	1879	3	FSM	ENSG00000128245.15	ENST00000397492.1	1879	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	12	True	NA	46	True	AATAAA	-20	NA	31944521	31957603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31944821_31950307_31950423_31956138
transcript_129046.known	chr22	+	407	1	FSM	ENSG00000232346.1	ENST00000423610.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGCAGTGCTGTA	22	False	NA	NA	False	NA	NA	NA	32039489	32039896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32039500_32039900
transcript_129047.known	chr22	-	1378	9	FSM	ENSG00000205856.4	ENST00000382097.4	1378	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.927024810886958	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGCCCAAGGTCAC	0	True	NA	NA	False	AATAAA	-16	NA	32159303	32149005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_32149614_32149752_32149781_32150318_32150480_32150991_32151020_32151486_32151552_32152066_32152095_32152561_32152627_32154243_32154319_32158983
transcript_129052.nic	chr22	+	4818	4	ISM	ENSG00000242082.2	ENST00000452181.2	6415	5	7	4767	7	0	5prime_fragment	FALSE	canonical	3	35	junction_3	2.49443825784929	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATCTGTCTCATCAC	-23	True	NA	9	True	TATAAA	-16	NA	32205121	32273615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_32205248_32207135_32207277_32268287_32268580_32269356
transcript_129055.known	chr22	-	2019	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_1	111.584012006816	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCGTCTGTTGCTTTG	-15	True	NA	-10	True	AAGAAA	-29	NA	32412247	32387581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_129060.known	chr22	-	767	5	FSM	ENSG00000100220.12	ENST00000487704.5	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_1	83.8342859455486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGCCTTTGACATAGA	-9	True	NA	NA	False	NA	NA	NA	32412241	32401561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_129063.known	chr22	+	2060	9	FSM	ENSG00000100225.18	ENST00000266087.12	2060	9	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	110.749435664476	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-2	True	NA	53	True	ATTAAA	-16	NA	32474810	32498829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_129064.known	chr22	+	1921	9	FSM	ENSG00000100225.18	ENST00000425028.5	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	216.589437357873	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-15	True	NA	53	True	ATTAAA	-16	NA	32474797	32498829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475125_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_129065.known	chr22	+	1888	9	FSM	ENSG00000100225.18	ENST00000397426.5	1888	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	205.767124135514	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	16	False	NA	53	True	ATTAAA	-16	NA	32475256	32498829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475399_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_129066.known	chr22	+	1535	9	FSM	ENSG00000100225.18	ENST00000452138.3	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	219.14204155068	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTGTTATTTTCTGAT	244	False	NA	NA	False	NA	NA	NA	32475236	32498608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475399_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_129071.known	chr22	+	1900	8	FSM	ENSG00000100225.18	ENST00000420700.5	1900	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	222.869871431373	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-56	True	NA	53	True	ATTAAA	-16	NA	32474675	32498829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475125_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_129082.nic	chr22	-	4969	6	ISM	ENSG00000185666.15	ENST00000358763.7	7867	14	-5	353094	-5	3661	5prime_fragment	FALSE	canonical	3	68	junction_2	6.99714227381436	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAACAGAAACCCTACAAC	-8	True	NA	NA	False	NA	NA	NA	33058386	32860913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
transcript_129086.nnic	chr22	-	4969	6	ISM	ENSG00000185666.15	ENST00000358763.7	7867	14	-5	353094	-5	3661	5prime_fragment	FALSE	canonical	3	68	junction_2	6.99714227381436	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAACAGAAACCCTACAAC	-8	True	NA	NA	False	NA	NA	NA	33058386	32860913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
transcript_129088.known	chr22	+	4597	5	FSM	ENSG00000100234.12	ENST00000266085.7	4597	5	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_4	6.68487097856047	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTGTCTCTTGCCTT	0	True	NA	21	True	AGTAAA	-21	NA	32801704	32863041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32802123_32849451_32849535_32857248_32857361_32858016_32858139_32859179
transcript_129091.known	chr22	-	4193	16	FSM	ENSG00000133424.22	ENST00000354992.7	4193	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	57.1696889385742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	2134	False	NA	-10	True	AATAAA	-26	NA	33920421	33273076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33856739_33856803_33919994
transcript_129092.known	chr22	-	4753	15	FSM	ENSG00000133424.22	ENST00000397394.8	4753	15	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_14	17.9171847733979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGTCAAAGTCCAATT	2079	False	NA	NA	False	AATAAA	-41	NA	33920476	33272508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33919994
transcript_129093.known	chr22	-	3823	15	FSM	ENSG00000133424.22	ENST00000676370.1	3823	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	49.7003264474147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	NA	False	NA	-10	True	AATAAA	-26	NA	33922596	33273076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33922476
transcript_129094.known	chr22	-	3912	15	FSM	ENSG00000133424.22	ENST00000676070.1	3912	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	49.7003264474147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	NA	False	NA	-10	True	AATAAA	-26	NA	33922829	33273076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33922620
transcript_129098.known	chr22	+	4216	12	FSM	ENSG00000100281.14	ENST00000418170.5	4216	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	29.9630626599976	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	-5	True	NA	35	True	AATAAA	-45	NA	35257486	35295807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
transcript_1291.known	chr1	+	3034	20	FSM	ENSG00000197530.13	ENST00000489635.5	3034	20	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	133.402189053708	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGCCTCTGCTGTCTGC	-17	True	NA	14	True	TATAAA	-16	NA	1615495	1630604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1615634_1616507_1616615_1623388_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_129100.nic	chr22	+	1104	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-12	30460	-6	-220	5prime_fragment	FALSE	canonical	3	35	junction_2	23.9099874529453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGTCAAAGAAGAGCAAAA	-11	True	NA	0	True	AAGAAA	-3	NA	35257480	35265347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_129101.nic	chr22	+	1327	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-12	30237	-6	0	5prime_fragment	FALSE	canonical	3	35	junction_2	23.9099874529453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	-11	True	NA	4	True	AAAAAG	-10	NA	35257480	35265570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_129102.known	chr22	+	1325	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.2414363469547	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	4	True	NA	1	True	AAAAAG	-7	NA	35257495	35265567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_129104.known	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	24.8327740429189	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	NA	False	NA	4	True	AAAAAG	-10	NA	35257451	35265570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
transcript_12911.known	chr1	+	737	3	FSM	ENSG00000277147.7	ENST00000621156.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	67	False	NA	17	True	AATAAA	-31	NA	149607408	149647624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149607555_149646598_149646946_149647380
transcript_129118.known	chr22	+	2278	15	FSM	ENSG00000100284.22	ENST00000449058.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_6	21.569654610123	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	17	True	NA	13	True	ATTAAA	-13	NA	35299893	35347973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_129133.known	chr22	+	2252	14	FSM	ENSG00000100284.22	ENST00000425375.5	2252	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	64.0943276759862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTCCTGGTCAGAAATG	529	False	NA	32	True	ATTAAA	-32	NA	35299803	35347992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_129137.nnic	chr22	+	2311	14	NIC	ENSG00000100284.22	novel	2278	15	NA	NA	-18	0	combination_of_known_splicesites	TRUE	canonical	3	18	junction_2	61.2001276248814	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	507	False	NA	13	True	ATTAAA	-13	NA	35299781	35347973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_35299981_35317876_35317962_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_129139.known	chr22	+	2211	14	FSM	ENSG00000100284.22	ENST00000424387.5	2211	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	62.4283731579474	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATTGTCAAGTCTCCT	7	True	NA	21	True	ATTAAA	-21	NA	35299883	35347981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_12915.known	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	114	False	NA	3	True	AATAAA	-17	NA	149607306	149647610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149607555_149646598
transcript_129158.known	chr22	+	849	3	FSM	ENSG00000100284.22	ENST00000487670.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGGGAAGTGGAGAGTG	-6	True	NA	NA	False	AAAAAG	-15	NA	35299870	35322612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35317876_35317962_35321958
transcript_12916.known	chr1	-	549	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-30	14	30	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	7567	False	NA	NA	False	AATAAA	-17	NA	149842736	149842187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149842200_149842700
transcript_129160.known	chr22	+	555	2	FSM	ENSG00000100284.22	ENST00000465529.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAGTGTGTACTAGAGAG	-11	True	NA	NA	False	NA	NA	NA	35299865	35318316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35317876
transcript_129161.known	chr22	+	2568	3	FSM	ENSG00000100284.22	ENST00000492723.1	2568	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTCAAGTCTCCTGG	327	False	NA	23	True	ATTAAA	-23	NA	35344185	35347983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35345785_35346929_35346970_35347054
transcript_129162.known	chr22	+	1554	5	FSM	ENSG00000100292.18	ENST00000216117.9	1554	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.5554619063266	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	1	True	NA	9	True	AATAAA	-19	NA	35381095	35394207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_129163.known	chr22	+	1697	5	FSM	ENSG00000100292.18	ENST00000481190.2	1697	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	50.9724190126386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTTTCATGGGCTTTGT	-2	True	NA	16	True	AATAAA	-26	NA	35381092	35394214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35381330_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_12917.known	chr1	+	3612	1	FSM	ENSG00000220323.4	ENST00000608318.2	3612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTCTTTGATTACAAT	718	False	NA	14	True	AATAAA	-23	NA	149842874	149846486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149842900_149846500
transcript_12918.known	chr1	+	564	1	FSM	ENSG00000288859.1	ENST00000607355.3	534	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	0	True	NA	NA	False	AATAAA	-17	NA	149851060	149851624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149851100_149851600
transcript_12919.known	chr1	-	1132	1	FSM	ENSG00000270276.3	ENST00000579512.3	396	1	-51	-685	-51	685	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATGAGATAACTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	149861210	149860078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149860100_149861200
transcript_129191.known	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_10	114.914761209124	5225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	-8	True	NA	19	True	AATACA	-16	NA	35400139	35425431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
transcript_12920.known	chr1	+	1234	1	FSM	ENSG00000264207.1	ENST00000577853.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCCTGTTTAATC	8661	False	NA	NA	False	TTTAAA	-5	NA	149861270	149862504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149861300_149862500
transcript_129206.nic	chr22	+	2227	16	ISM	ENSG00000100297.16	ENST00000216122.9	3458	17	-48	2091	-42	-1161	5prime_fragment	FALSE	canonical	3	1292	junction_10	117.80050933676	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCTGCCTTGGAGTG	0	True	NA	NA	False	NA	NA	NA	35400091	35423340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213
transcript_12921.known	chr1	-	2194	1	FSM	ENSG00000184678.11	ENST00000369155.4	2224	1	30	0	30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTGGATTCTTTTA	1312	False	NA	-11	True	AATAAA	-19	NA	149886652	149884458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149884500_149886700
transcript_129215.known	chr22	+	2402	16	FSM	ENSG00000100297.16	ENST00000382011.9	2402	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	380.167623847984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTTGTGCACTC	-11	True	NA	19	True	AATAAA	-19	NA	35400136	35424501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
transcript_12922.known	chr1	+	494	1	FSM	ENSG00000184260.6	ENST00000331380.4	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTCAAAAAAAGAGCTA	-3	True	NA	46	True	NA	NA	NA	149886917	149887411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149886900_149887400
transcript_12923.known	chr1	+	891	2	FSM	ENSG00000178096.9	ENST00000369152.6	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	-4	True	NA	NA	False	ATTAAA	-17	NA	149899567	149900795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149899673_149900009
transcript_12924.nic	chr1	+	1024	2	ISM	ENSG00000178096.9	ENST00000369153.2	1096	3	11707	-299	-9	-5	3prime_fragment	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCTGTGTTCTTAAT	-3	True	NA	NA	False	ATTAAA	-12	NA	149899596	149900790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_149899673_149899842
transcript_12925.known	chr1	+	811	2	FSM	ENSG00000178096.9	ENST00000369150.1	811	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTTGTAAGGGATG	-3	True	NA	NA	False	NA	NA	NA	149899625	149900548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149899731_149899842
transcript_129254.known	chr22	+	3447	3	FSM	ENSG00000100302.7	ENST00000216127.5	3447	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTCCTTGCCCATGTG	-6	True	NA	6	True	AATAAA	-18	NA	35540830	35553999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35541501_35546800_35547081_35551502
transcript_129256.known	chr22	-	582	4	FSM	ENSG00000198125.13	ENST00000406324.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCCCGGGTTCAAG	814	False	NA	NA	False	NA	NA	NA	35622561	35607271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35607444_35610883_35611107_35617162_35617266_35622477
transcript_129259.nic	chr22	-	1735	14	NIC	ENSG00000100320.23	novel	1409	14	NA	NA	277	0	combination_of_known_junctions	TRUE	canonical	3	260	junction_12	74.840896328903	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGCATTTCCATGTCT	403	False	NA	20	True	TTTAAA	-20	NA	36028547	35743932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35938846_35938898_36028239
transcript_12926.known	chr1	-	497	1	FSM	ENSG00000184270.6	ENST00000331128.6	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTCAAATGAAGGGCTG	-1	True	NA	NA	False	NA	NA	NA	149887965	149887468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149887500_149888000
transcript_129261.known	chr22	-	7224	14	FSM	ENSG00000100320.23	ENST00000438146.7	7224	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	136.791553080162	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	-21	True	NA	-5	True	AATAAA	-15	NA	36028824	35738735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
transcript_129263.nic	chr22	-	1581	14	NIC	ENSG00000100320.23	novel	1409	14	NA	NA	277	0	combination_of_known_junctions	FALSE	canonical	3	260	junction_12	74.840896328903	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACACAAAAAAAG	403	False	NA	-73	True	AAAACA	-12	NA	36028547	35744086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35938846_35938898_36028239
transcript_129264.nic	chr22	-	1584	14	NIC	ENSG00000100320.23	novel	7224	14	NA	NA	277	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_11	96.7316791515545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACACAAAAAAAG	403	False	NA	-73	True	AAAACA	-12	NA	36028547	35744086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
transcript_129269.known	chr22	-	1254	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_12	93.3464276528864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATTTACTAGTAGAGG	9835	False	NA	-134	True	NA	NA	NA	35840284	35744147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_12927.known	chr1	+	743	2	FSM	ENSG00000178096.9	ENST00000476344.1	743	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTTAATGGACTGCT	6	True	NA	NA	False	ATTAAA	-20	NA	149899605	149900798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149899673_149900122
transcript_129272.known	chr22	-	1935	13	FSM	ENSG00000100320.23	ENST00000449924.6	1935	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	138.775898483851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	8	True	NA	-4	True	ATTAAA	-20	NA	35840407	35743601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_129275.nic	chr22	-	1495	13	NIC	ENSG00000100320.23	novel	1254	13	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_11	112.901505747266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACACAAAAAAAG	2	True	NA	-73	True	AAAACA	-12	NA	35840461	35744086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_129282.known	chr22	-	1706	12	FSM	ENSG00000100320.23	ENST00000414461.6	1706	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	164.503359758702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	9901	False	NA	-4	True	ATTAAA	-20	NA	35840218	35743601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_129284.known	chr22	-	2685	6	FSM	ENSG00000128335.14	ENST00000249066.10	2685	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	15.2367975637927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGACTTGTTCGAGTCA	23	False	NA	-6	True	AATAAA	-16	NA	36239954	36226209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440_36239562_36239731
transcript_129288.known	chr22	-	2429	5	FSM	ENSG00000128335.14	ENST00000358502.10	2429	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3.56195171219375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTTGTTCGAGTCAT	-1	True	NA	-5	True	AATAAA	-17	NA	36239527	36226208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440
transcript_129293.known	chr22	-	7451	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	0	0	0	multi-exon	TRUE	canonical	3	844	junction_34	166.361862742036	828	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCGTGTCTGTAGCATT	-14	True	NA	-5	True	AATAAA	-16	NA	36387967	36281279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_1293.known	chr1	+	3236	20	FSM	ENSG00000197530.13	ENST00000520777.6	3236	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	134.675129781699	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTCTGCTGTCTGCC	-13	True	NA	15	True	TATAAA	-17	NA	1615499	1630605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1615634_1616507_1616615_1623388_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625557_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_12930.known	chr1	-	4378	13	FSM	ENSG00000159164.10	ENST00000369146.8	4378	13	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	21.3261706725693	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATACCTGCTTCTGTG	-3	True	NA	-7	True	AATAAA	-28	NA	149917844	149903317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149905198_149905879_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_12932.known	chr1	-	2903	12	FSM	ENSG00000159164.10	ENST00000369145.1	2903	12	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_9	17.6452648577692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	0	True	NA	NA	False	NA	NA	NA	149917841	149905471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_12936.known	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1408	junction_3	156.466737679291	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-18	True	NA	-23	True	AATAAA	-18	NA	149927803	149923316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
transcript_129377.known	chr22	+	510	2	FSM	ENSG00000223695.1	ENST00000424761.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGGCTCATGCCTGT	32	False	NA	NA	False	NA	NA	NA	36388625	36396517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_36388736_36396117
transcript_129386.known	chr22	-	736	4	FSM	ENSG00000100348.10	ENST00000487725.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	311.690373429929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTCCCAGGATGTGTG	-18	True	NA	NA	False	NA	NA	NA	36481632	36467548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480749_36481563
transcript_129388.known	chr22	-	1280	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	306.510467466719	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-20	True	NA	-14	True	AATAAA	-19	NA	36481634	36467045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
transcript_129389.known	chr22	-	912	4	FSM	ENSG00000100348.10	ENST00000403313.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	323.463547662896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCATACGCCTTTCA	1	True	NA	NA	False	NA	NA	NA	36481340	36467590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481142
transcript_129390.known	chr22	-	1336	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_3	21.6487105081727	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	17	False	36481657	-14	True	AATAAA	-19	NA	36481640	36467045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
transcript_129398.nnic	chr22	-	1210	3	NIC	ENSG00000100348.10	novel	1336	4	NA	NA	0	-2	combination_of_known_splicesites	TRUE	canonical	3	43	junction_1	305.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAATGTCACATCTGTG	17	False	36481657	-16	True	AATAAA	-17	NA	36481640	36467047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_36467918_36480574_36480838_36481563
transcript_12941.known	chr1	-	2840	17	FSM	ENSG00000014914.21	ENST00000439741.4	2840	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	6.32331993497087	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGCATTGTTTCTTGT	-20	True	NA	-1	True	ATTAAA	-19	NA	149936879	149928650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149929318_149929622_149929917_149930364_149930548_149930791_149930966_149931259_149931427_149931943_149932015_149932263_149932331_149933405_149933531_149933609_149933699_149933854_149933943_149934190_149934327_149934447_149934527_149934985_149935129_149935298_149935360_149935583_149935706_149936153_149936230_149936581
transcript_129411.nnic	chr22	-	4551	9	NNC	ENSG00000100350.16	novel	4906	9	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_1	18.6476372497966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	NA	False	NA	-16	True	AGTAAA	-19	NA	36507093	36487189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_36487874_36488866_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895
transcript_129412.nnic	chr22	-	4539	9	NNC	ENSG00000100350.16	novel	4906	9	NA	NA	-16	0	intron_retention	FALSE	canonical	1	6	junction_1	17.0948639947792	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	NA	False	NA	-16	True	AGTAAA	-19	NA	36507093	36487189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_36487874_36488878_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895
transcript_129419.known	chr22	-	3933	9	FSM	ENSG00000100350.16	ENST00000216187.10	3933	9	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_8	16.1123981765596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACAAAGTATGCT	46	False	NA	NA	False	AATAAA	-5	NA	36507022	36488241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36506911
transcript_129420.known	chr22	-	4906	9	FSM	ENSG00000100350.16	ENST00000397224.9	4906	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	13.3322916259734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	-2	True	NA	-16	True	AGTAAA	-19	NA	36507040	36487189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36507008
transcript_129425.nnic	chr22	-	4281	8	NNC	ENSG00000100350.16	novel	4906	9	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_1	22.4808308365603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	NA	False	NA	-16	True	AGTAAA	-19	NA	36507093	36487189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_36487874_36488866_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504514_36504767_36505895
transcript_129428.known	chr22	-	2184	8	FSM	ENSG00000100350.16	ENST00000397223.4	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	11.8769198233294	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTGGCCAGGCCTCCC	538	False	NA	NA	False	NA	NA	NA	36506530	36489986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895
transcript_129439.nnic	chr22	-	4222	7	FSM	ENSG00000100350.16	ENST00000691242.1	3929	7	-263	-30	-16	0	multi-exon	FALSE	canonical	2	9	junction_5	17.8107333431901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACAAAGTATGCT	NA	False	NA	NA	False	AATAAA	-5	NA	36507093	36488241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504514_36504767_36505895
transcript_129444.nnic	chr22	-	3364	7	FSM	ENSG00000100350.16	ENST00000691242.1	3929	7	-210	775	0	-448	multi-exon	FALSE	canonical	2	9	junction_5	17.8107333431901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTGGTTCCTAGTCTC	-2	True	NA	-18	True	NA	NA	NA	36507040	36489046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504514_36504767_36505895
transcript_129465.known	chr22	-	1851	15	FSM	ENSG00000100353.18	ENST00000405442.5	1851	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	390.884841332679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTTAGCAGATGAAATA	308	False	NA	-64	True	NA	NA	NA	36528897	36510898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36528791
transcript_129466.nic	chr22	-	1992	15	NIC	ENSG00000100353.18	novel	1880	15	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_14	381.293508725127	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	123	False	NA	-20	True	AATAAA	-23	NA	36529082	36510854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36528879
transcript_129467.known	chr22	-	1880	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_9	115.809220316018	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	-7	True	NA	-20	True	AATAAA	-23	NA	36529166	36510854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
transcript_12948.known	chr1	-	8922	12	FSM	ENSG00000264522.6	ENST00000581312.6	8922	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	7.39890543613666	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTTATTTTCTGT	3	True	NA	-11	True	AATAAA	-22	NA	150010726	149937811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149945066_149947250_149947336_149948968_149949084_149949628_149949779_149950093_149950222_149959683_149959797_149964221_149964350_149965776_149965879_149967293_149967522_149971062_149971252_149977425_149977577_150010447
transcript_129497.nic	chr22	-	857	8	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	86	junction_7	175.065468803379	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	13	False	NA	-8	True	AATAAA	-17	NA	36776139	36758210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673_36775795_36776030
transcript_129499.known	chr22	-	1073	7	FSM	ENSG00000100360.15	ENST00000433985.7	1073	7	0	0	0	0	multi-exon	FALSE	canonical	2	397	junction_3	76.9437023630481	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-18	True	NA	-8	True	AATAAA	-17	NA	36776119	36758210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
transcript_1295.known	chr1	+	3206	20	FSM	ENSG00000197530.13	ENST00000355826.10	3206	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	132.997219473986	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTCTGCTGTCTGCC	-13	True	NA	15	True	TATAAA	-17	NA	1615499	1630605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1615634_1616507_1616615_1623430_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_12950.known	chr1	+	2315	15	FSM	ENSG00000136631.15	ENST00000643970.1	2315	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.8409384296569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTCTGCTTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	150067278	150145163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150067607_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_129506.known	chr22	-	1113	7	FSM	ENSG00000100360.15	ENST00000340630.9	1113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	218.135024443322	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTTCCACTCTTGGCCT	-1	True	NA	1	True	AATAAA	-26	NA	36776153	36758201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767860_36775673
transcript_129507.known	chr22	-	6475	5	FSM	ENSG00000100360.15	ENST00000471809.5	6475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	253.795685542525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-24	True	NA	-8	True	AATAAA	-17	NA	36776125	36758210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36764037_36766137_36766198_36767305_36767366_36767782_36767860_36775673
transcript_129508.known	chr22	-	550	4	FSM	ENSG00000100362.13	ENST00000417718.7	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-10	True	NA	-17	True	AATAAA	-15	NA	36817035	36800702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944
transcript_12952.known	chr1	+	2328	15	FSM	ENSG00000136631.15	ENST00000644510.2	2328	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	18.0311521811445	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	2	True	NA	12	True	AATAAA	-22	NA	150067775	150145329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_129524.known	chr22	+	1329	4	FSM	ENSG00000128309.17	ENST00000404393.5	1329	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	65.2908024831131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAGTGCTAAAT	3	True	NA	35	True	NA	NA	NA	37019771	37029796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019775_37024191_37024811_37025001_37025128_37029215
transcript_129527.known	chr22	+	1453	4	FSM	ENSG00000128309.17	ENST00000404802.7	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	402.02349295643	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAACCAAGTGCTAA	3	True	NA	33	True	NA	NA	NA	37019695	37029794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019775_37023751_37023928_37024191_37024811_37029215
transcript_129534.nnic	chr22	+	1446	4	NNC	ENSG00000128309.17	novel	1350	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	315.521790055774	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTAGCTCTGGGGCTGC	-22	True	NA	54	True	AATAAA	-17	NA	37019746	37029815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37019873_37024191_37024811_37026998_37027100_37029215
transcript_129538.known	chr22	+	1504	4	FSM	ENSG00000128309.17	ENST00000341116.7	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	381.45365234703	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTCTGGGGCTGCCTCG	-1	True	NA	58	True	AATAAA	-21	NA	37019767	37029819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019873_37023751_37023928_37024191_37024811_37029215
transcript_129547.known	chr22	+	1345	3	FSM	ENSG00000128309.17	ENST00000401419.7	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	380	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTGCTAAATCTTGT	NA	False	NA	40	True	AATAAA	-3	NA	37019634	37029801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019775_37024191_37024811_37029215
transcript_129552.known	chr22	+	1350	3	FSM	ENSG00000128309.17	ENST00000429360.6	1350	3	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_1	117	3007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTAGCTCTGGGGCTGC	-27	True	NA	54	True	AATAAA	-17	NA	37019741	37029815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019873_37024191_37024811_37029215
transcript_129565.known	chr22	-	1125	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	44.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	-3	True	NA	-21	True	AATAAA	-16	NA	37019447	37010864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37011326_37018137_37018754_37019399
transcript_12957.known	chr1	+	2192	15	FSM	ENSG00000136631.15	ENST00000642919.1	2192	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	49.6228633940905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTACCATGTTTCTTT	39	True	NA	NA	False	NA	NA	NA	150067812	150145210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150067951_150068609_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_129570.known	chr22	-	1797	2	FSM	ENSG00000128311.14	ENST00000403892.7	1797	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCCTGCCTCTCTCTG	668	False	NA	-15	True	AATAAA	-22	NA	37019467	37010858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37011326_37018137
transcript_129572.known	chr22	+	1763	9	FSM	ENSG00000100379.18	ENST00000403888.8	1760	9	-3	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	61.7149445029322	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	-5	True	NA	28	True	AATAAA	-19	NA	37051738	37063390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061176_37061538_37061630_37062524
transcript_129573.nnic	chr22	+	1997	9	NNC	ENSG00000100379.18	novel	1760	9	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	63.663176169588	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	3	True	NA	28	True	AATAAA	-19	NA	37051713	37063390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061385_37061538_37061630_37062524
transcript_129577.nic	chr22	+	2123	8	NIC	ENSG00000100379.18	novel	1760	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_6	50.6524774259636	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	-2	True	NA	28	True	AATAAA	-19	NA	37051741	37063390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061630_37062524
transcript_129578.known	chr22	+	1691	8	FSM	ENSG00000100379.18	ENST00000402077.8	1691	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	37.1368126949912	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	-5	True	NA	28	True	AATAAA	-19	NA	37051738	37063390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538_37061630_37062524
transcript_129585.nic	chr22	+	2319	7	NIC	ENSG00000100379.18	novel	1760	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	111	junction_6	23.9333565459497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	16	False	NA	28	True	AATAAA	-19	NA	37051726	37063390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37061630_37062524
transcript_129588.known	chr22	+	1438	7	FSM	ENSG00000100379.18	ENST00000456470.1	1438	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	57.0314240864923	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	-4	True	NA	12	True	AATAAA	-3	NA	37051875	37063374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37061538_37061630_37062524
transcript_129591.nic	chr22	+	3219	6	ISM	ENSG00000100379.18	ENST00000402077.8	1691	8	-19	2	-19	-1	intron_retention	FALSE	canonical	3	139	junction_5	16.7523132730975	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGGCTGTTGCCCTCT	9	False	NA	26	True	AATAAA	-17	NA	37051719	37063388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822
transcript_129592.known	chr22	+	1502	6	FSM	ENSG00000100379.18	ENST00000610767.5	1477	6	-25	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_5	64.7950615402131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGCTGTTGCCCTCTT	-8	True	NA	27	True	AATAAA	-18	NA	37051735	37063389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37062524
transcript_129596.known	chr22	-	4034	10	FSM	ENSG00000100385.14	ENST00000216223.10	4034	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATAGTGTTGATATTCA	-5	True	NA	NA	False	AATAAA	-31	NA	37149916	37125842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37128849_37132383_37132469_37135327_37135443_37136227_37136394_37137586_37137736_37139116_37139223_37142433_37142513_37143520_37143636_37144084_37144206_37149824
transcript_129607.known	chr22	-	1647	4	FSM	ENSG00000133466.14	ENST00000397110.6	1647	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.93025150224688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCAGACTGGTTCTTTC	12	True	NA	-2	True	ATTAAA	-20	NA	37188286	37180166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37180868_37182151_37182736_37185217_37185456_37188162
transcript_129609.known	chr22	-	2893	3	FSM	ENSG00000133466.14	ENST00000337843.7	2893	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGACTGGTTCTTTCT	-4	True	NA	-1	True	ATTAAA	-21	NA	37188247	37180165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37182736_37185217_37185456_37188162
transcript_12961.nic	chr1	+	1608	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	301	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	112.329159170716	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCATTGCTCTTGCTGAT	0	True	NA	7	True	GATAAA	-42	NA	150149483	150159628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_129610.known	chr22	-	1472	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	3.43592135468138	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	-7	True	NA	-15	True	AATAAA	-14	NA	37244269	37225269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
transcript_129611.nic	chr22	-	1773	9	NIC	ENSG00000100060.18	novel	2073	8	NA	NA	-325	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	7.39932429347437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTGGTCCAGTTTT	NA	False	NA	-6	True	ATTAAA	-16	NA	37486718	37469067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_37469313_37469941_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
transcript_129612.known	chr22	-	2073	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	4.55801603815538	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	7	True	NA	-1	True	ATTAAA	-21	NA	37486384	37469062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
transcript_129613.nic	chr22	-	2057	7	NIC	ENSG00000100060.18	novel	2073	8	NA	NA	-24	0	intron_retention	FALSE	canonical	2	6	junction_6	6.8414585839246	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	110	False	37486431	-1	True	ATTAAA	-21	NA	37486417	37469062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485922
transcript_129616.known	chr22	-	2034	7	FSM	ENSG00000100060.18	ENST00000416983.7	2034	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.02619644270067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	4	True	NA	-1	True	ATTAAA	-21	NA	37486387	37469062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485915
transcript_129619.known	chr22	-	4113	21	FSM	ENSG00000100065.15	ENST00000403299.5	4113	21	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_20	14.9361139524309	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	-7	True	NA	-5	True	ATTAAA	-16	NA	37519542	37490361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448_37496561_37497018_37497179_37502601_37502726_37503184_37503214_37504185_37504302_37504634_37504770_37506191_37506384_37507828_37507955_37508526_37508683_37510211_37510422_37515972_37516299_37517970_37518109_37518965_37519218_37519342
transcript_129621.known	chr22	-	4111	20	FSM	ENSG00000100065.15	ENST00000251973.10	4111	20	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_11	14.1246920393953	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	-27	True	NA	-5	True	ATTAAA	-16	NA	37519415	37490361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448_37496561_37497018_37497179_37502601_37502726_37503184_37503214_37504185_37504302_37504634_37504770_37506191_37506384_37507828_37507955_37508526_37508683_37510211_37510422_37515972_37516299_37517970_37518109_37518965
transcript_129629.known	chr22	-	2169	8	FSM	ENSG00000100065.15	ENST00000488141.5	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	13.1986393856584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	9	True	NA	-5	True	ATTAAA	-16	NA	37496780	37490361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448
transcript_12963.known	chr1	+	2114	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	25.810075552001	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTTCTCATTCCTAG	20	True	NA	4	True	ATTAAA	-16	NA	150149915	150160065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_129634.nic	chr22	+	2294	4	NIC	ENSG00000128283.7	novel	2148	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	63.1893099257215	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	5	True	NA	17	True	ATTAAA	-20	NA	37560456	37569405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37560589_37565599_37565723_37566071_37566813_37568107
transcript_129635.nnic	chr22	+	2325	3	NNC	ENSG00000128283.7	novel	720	3	NA	NA	-899	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	66.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	3476	False	NA	17	True	ATTAAA	-20	NA	37559580	37569405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37559867_37566071_37566813_37568107
transcript_129636.known	chr22	+	2148	3	FSM	ENSG00000128283.7	ENST00000249014.5	2148	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	3.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	-9	True	NA	17	True	ATTAAA	-20	NA	37560479	37569405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37560589_37566071_37566813_37568107
transcript_129646.known	chr22	+	3205	18	FSM	ENSG00000100083.19	ENST00000406772.5	3205	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.5686518775086	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGCTCTCGTGGCCC	-2	True	NA	16	True	AATAAA	-17	NA	37609039	37633563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37609357_37613032_37613192_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_129650.nic	chr22	+	2891	17	NIC	ENSG00000100083.19	novel	3205	18	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	63.498738914643	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGCTCTCGTGGCCC	-4	True	NA	16	True	AATAAA	-17	NA	37608992	37633563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37609155_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_129663.known	chr22	+	2800	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	20.6131594800506	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	-21	True	NA	17	True	AATAAA	-18	NA	37608833	37633564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_129664.known	chr22	+	2528	15	FSM	ENSG00000100083.19	ENST00000325180.12	2528	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	61.6244385659734	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	-10	True	NA	17	True	AATAAA	-18	NA	37608844	37633564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_129665.known	chr22	+	1384	3	FSM	ENSG00000100083.19	ENST00000489772.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATAATGTACA	-25	True	NA	NA	False	AAAAAG	-7	NA	37608829	37618146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37608904_37614189_37614275_37616921
transcript_129666.nic	chr22	+	2202	19	NIC	ENSG00000100092.24	novel	2858	20	NA	NA	-229	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_18	36.3562618784959	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCTGCCCAAATGATAG	315	False	NA	19	True	AATAAA	-20	NA	37639439	37656042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655271_37655316_37655925
transcript_12967.known	chr1	-	3407	7	FSM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	0	0	0	multi-exon	TRUE	canonical	3	1129	junction_5	58.5775838809807	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-1	True	NA	-3	True	AATAAA	-24	NA	150236112	150218416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_129670.known	chr22	+	2658	18	FSM	ENSG00000100092.24	ENST00000649765.2	2658	18	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_17	19.3326373020316	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTCTTTGCCTCCTTTC	8	True	NA	94	True	AATAAA	-31	NA	37639668	37656117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655271
transcript_129672.nic	chr22	+	2154	18	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	-229	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	32.1448925592707	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCAGCTGCCCAAATG	315	False	NA	15	True	AATAAA	-16	NA	37639439	37656038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655925
transcript_129673.nic	chr22	+	2228	18	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	-229	-5	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	32.1448925592707	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACATATTCTTTGCCTC	315	False	NA	89	True	AATAAA	-26	NA	37639439	37656112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655925
transcript_129676.nic	chr22	+	2759	17	ISM	ENSG00000100092.24	ENST00000649765.2	2658	18	-229	1526	-229	-1093	5prime_fragment	FALSE	canonical	3	104	junction_1	14.2937923589228	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTGGCAGTGAAGGAGA	315	False	NA	NA	False	AAAAAG	-7	NA	37639439	37654591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778
transcript_129684.nic	chr22	+	2760	17	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	-224	0	intron_retention	FALSE	canonical	3	24	junction_1	33.3297914784956	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCAGCTGCCCAAATG	320	False	NA	15	True	AATAAA	-16	NA	37639444	37656038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37639847_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655271
transcript_12970.nic	chr1	-	1037	6	ISM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	4794	0	-2673	5prime_fragment	FALSE	canonical	3	1129	junction_4	63.8517031879338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGGAAGAAGAGGAAGA	-1	True	NA	-16	True	NA	NA	NA	150236112	150223210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_129702.known	chr22	+	528	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	16.0831174424198	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	-2	True	NA	15	True	AATAAA	-26	NA	37675635	37679802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
transcript_129704.known	chr22	+	2324	14	FSM	ENSG00000100106.22	ENST00000403663.6	2324	14	0	0	0	0	multi-exon	TRUE	canonical	3	265	junction_2	42.7594067300439	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTCCTGGTGGCTGTGT	-29	True	NA	38	True	TTTAAA	-15	NA	37746232	37774140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37746421_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
transcript_129709.known	chr22	+	903	7	FSM	ENSG00000273899.5	ENST00000611699.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	22.4530374089763	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	7	True	NA	12	True	ATTAAA	-14	NA	37686359	37693471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_12971.nic	chr1	-	934	5	ISM	ENSG00000143401.15	ENST00000583931.6	3407	7	-95	8359	-51	-168	5prime_fragment	FALSE	canonical	3	1129	junction_3	71.1033578672625	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGGAAAATGAAGC	NA	False	NA	-1	True	TTTAAA	-34	NA	150236207	150226775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_129710.nnic	chr22	+	1582	7	NNC	ENSG00000273899.5	novel	945	7	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	97.8411410853782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATGTGTGCCTTCATT	4576	False	NA	13	True	ATTAAA	-15	NA	37686283	37693472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37692027_37693331
transcript_129715.known	chr22	+	2830	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	20.6842935581566	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	-10	True	NA	15	True	ATTAAA	-17	NA	37686342	37693474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
transcript_12972.nic	chr1	-	629	3	ISM	ENSG00000143401.15	ENST00000533654.5	908	5	-157	10057	0	-1523	5prime_fragment	FALSE	canonical	3	1129	junction_1	86.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCAGTACAGTAGAAGC	-1	True	NA	NA	False	AATAAA	-2	NA	150236112	150230594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_150230694_150231776_150231927_150235732
transcript_129726.known	chr22	+	632	5	FSM	ENSG00000273899.5	ENST00000468597.5	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	20.0546129356814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCCAGTGATCCTCTG	-7	True	NA	NA	False	NA	NA	NA	37686345	37690900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696
transcript_129735.known	chr22	+	2204	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	726	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	0	True	NA	17	True	AATAAA	-17	NA	37805228	37807432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37805200_37807400
transcript_129737.nic	chr22	+	1611	10	NIC	ENSG00000100116.17	novel	1656	10	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_9	102.582216349186	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCGTGGTGGCGTAT	-4	True	NA	5	True	ACTAAA	-12	NA	37807871	37817176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566_37816726_37816928
transcript_129738.nic	chr22	+	1779	10	NIC	ENSG00000100116.17	novel	1656	10	NA	NA	-33	168	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	102.582216349186	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCACCCAGGCCTTTGG	-4	True	NA	NA	False	NA	NA	NA	37807871	37817344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566_37816726_37816928
transcript_12974.known	chr1	+	1788	11	FSM	ENSG00000118298.12	ENST00000369111.9	1788	11	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_8	54.5945052180162	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	0	True	NA	28	True	ATTAAA	-15	NA	150257773	150265078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_129741.known	chr22	+	1656	10	FSM	ENSG00000100116.17	ENST00000323205.10	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	129.194465347952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCGTGGTGGCGTAT	-28	True	NA	5	True	ACTAAA	-12	NA	37807904	37817176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566_37816726_37816928
transcript_129748.known	chr22	+	1473	9	FSM	ENSG00000100116.17	ENST00000248924.11	1473	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	32.3803084451029	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	1	True	NA	28	True	NA	NA	NA	37807933	37816897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_12975.nnic	chr1	+	2206	11	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	-14	0	intron_retention	FALSE	canonical	3	55	junction_2	111.013332532629	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	NA	False	NA	28	True	ATTAAA	-15	NA	150257236	150265078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150258184_150260150_150260172_150261577_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_129751.nic	chr22	+	1613	9	ISM	ENSG00000100116.17	ENST00000323205.10	1656	10	-33	279	-33	0	5prime_fragment	TRUE	canonical	3	65	junction_1	98.5544741500862	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	-4	True	NA	28	True	NA	NA	NA	37807871	37816897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_129759.nic	chr22	+	1380	8	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	117.84735890125	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	-37	True	NA	28	True	NA	NA	NA	37807895	37816897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_129774.known	chr22	+	558	4	FSM	ENSG00000100116.17	ENST00000426858.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	154.73489874262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCTAGATATGGTGCCC	5	True	NA	NA	False	NA	NA	NA	37807937	37815208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125
transcript_129789.known	chr22	+	2669	13	FSM	ENSG00000100129.18	ENST00000652021.1	2669	13	0	0	0	0	multi-exon	FALSE	canonical	3	2177	junction_7	206.805262666758	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCACGTTCAGTATTT	0	True	NA	9	True	CATAAA	-23	NA	37849418	37889407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37849483_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_1298.nic	chr1	+	3151	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-34	0	intron_retention	FALSE	canonical	3	35	junction_3	131.489569644165	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	-46	True	NA	13	True	TATAAA	-15	NA	1615844	1630603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623388_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_12980.nic	chr1	+	2336	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	-110	0	intron_retention	TRUE	canonical	3	101	junction_9	103.983735670299	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	NA	False	NA	28	True	ATTAAA	-15	NA	150257140	150265078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
transcript_129800.known	chr22	+	1599	11	FSM	ENSG00000100129.18	ENST00000381683.10	1599	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	779.333362560592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGAACCTGTTTTGATG	-2	True	NA	NA	False	NA	NA	NA	37849416	37888479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37849483_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_129806.known	chr22	-	954	8	FSM	ENSG00000100124.15	ENST00000406423.5	954	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	29.6551609577249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCGCAGATGCCGTGG	7511	False	NA	NA	False	NA	NA	NA	37843882	37831824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37832018_37832636_37832745_37832957_37833083_37833158_37833207_37833683_37833756_37838499_37838594_37840186_37840235_37843616
transcript_129807.known	chr22	-	789	8	FSM	ENSG00000100124.15	ENST00000407117.6	789	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	29.4445171778505	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGCAGATGCAGAG	4	True	NA	NA	False	NA	NA	NA	37844170	37831978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37832018_37832636_37832745_37832957_37833083_37833158_37833207_37833683_37833751_37838499_37838594_37840186_37840235_37843910
transcript_129817.known	chr22	+	1294	6	FSM	ENSG00000100129.18	ENST00000482600.5	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	2277	junction_1	178.582641933644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTCTCATTATTGTA	6872	False	NA	29	True	AGTAAA	-18	NA	37870164	37888631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_129818.known	chr22	+	1708	12	FSM	ENSG00000100129.18	ENST00000477256.5	1708	12	0	0	0	0	multi-exon	FALSE	canonical	3	2177	junction_7	199.29437506835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGGCTCAGGACAGA	2	True	NA	NA	False	NA	NA	NA	37849420	37886868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37849483_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764
transcript_12982.nnic	chr1	+	2235	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	9	0	intron_retention	FALSE	canonical	1	10	junction_5	122.897528328017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	2	True	NA	28	True	ATTAAA	-15	NA	150257259	150265078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_129821.known	chr22	+	2587	16	FSM	ENSG00000100139.14	ENST00000680501.1	2587	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	25.9251915239899	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACGAGAAGCCAGTTGG	106	False	NA	NA	False	NA	NA	NA	37906422	37940830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937084_37937195_37937745_37937793_37940708
transcript_129822.known	chr22	+	2976	16	FSM	ENSG00000100139.14	ENST00000424008.2	2976	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	26.4075746709159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCTCCGCCTCCAGGG	106	False	NA	NA	False	NA	NA	NA	37906422	37941187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937820_37940708
transcript_129826.known	chr22	+	2137	15	FSM	ENSG00000100139.14	ENST00000681920.1	2137	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	26.349786042581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACGAGAAGCCAGTTGG	106	False	NA	NA	False	NA	NA	NA	37906422	37940830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
transcript_129830.nic	chr22	+	1182	5	ISM	ENSG00000100139.14	ENST00000445494.6	2586	16	-136	21175	-10	0	5prime_fragment	FALSE	canonical	3	91	junction_4	11.0792599030802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCATTGAAAAAATAAAAT	-30	True	NA	NA	False	NA	NA	NA	37906286	37919655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035
transcript_129835.known	chr22	-	1942	7	FSM	ENSG00000128346.11	ENST00000403305.6	1942	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGCCCTGTAAATGGT	-15	True	NA	NA	False	NA	NA	NA	37953601	37943049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37944247_37944416_37944518_37945041_37945174_37947280_37947464_37951459_37951523_37953046_37953159_37953447
transcript_129836.known	chr22	+	550	6	FSM	ENSG00000100142.16	ENST00000492213.5	550	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	901.184198707456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCATCATCACCGACTG	7	True	NA	-64	True	NA	NA	NA	37953698	37967694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956843_37958373_37958472_37959345_37959477_37967098_37967171_37967624
transcript_129842.known	chr22	+	2070	5	FSM	ENSG00000100142.16	ENST00000442738.7	2070	5	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_4	86.9004459137006	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTCTGTTTTCTTA	7	True	NA	15	True	AATAAA	-16	NA	37953698	37969312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_129843.known	chr22	+	615	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	782.673742692317	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	7	True	NA	40	True	AATAAA	-14	NA	37953698	37967798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
transcript_129844.known	chr22	+	584	5	FSM	ENSG00000100142.16	ENST00000470701.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	796.618596004387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTCCCCTCTGCTTAT	5	False	NA	43	True	AATAAA	-17	NA	37953726	37967801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953861_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_129845.known	chr22	+	760	4	FSM	ENSG00000100142.16	ENST00000606538.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_3	34.6634613902818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGCGGCAGAGCTG	19	True	NA	42	True	NA	NA	NA	37953710	37967560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098
transcript_129850.known	chr22	-	2885	4	FSM	ENSG00000100146.19	ENST00000396884.8	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGGTGAGCCTGACC	-6	True	NA	-34	True	AATAAA	-18	NA	37984555	37972311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37974199_37977866_37978136_37983356_37983869_37984338
transcript_129865.known	chr22	+	2058	13	FSM	ENSG00000100151.16	ENST00000356976.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.1917292776368	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	3	True	NA	28	True	AATAAA	-20	NA	38057403	38075701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_129869.known	chr22	+	2164	13	FSM	ENSG00000100151.16	ENST00000404072.7	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	41.928179333501	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	NA	False	NA	28	True	AATAAA	-20	NA	38057199	38075701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38057490_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_129881.nnic	chr22	+	1997	12	NIC	ENSG00000100151.16	novel	2058	13	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	45.556794088295	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	10	True	NA	28	True	AATAAA	-20	NA	38057410	38075701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_129916.known	chr22	-	677	2	FSM	ENSG00000100156.12	ENST00000469516.5	677	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATTCCTCCGCCCAG	4857	False	NA	NA	False	GATAAA	-20	NA	38084093	38078133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38078705_38083987
transcript_129918.known	chr22	-	1865	9	FSM	ENSG00000128298.18	ENST00000332536.10	1865	9	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	8.18439826743543	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCTGCTCGGGTCAGGGG	-1	True	NA	NA	False	NA	NA	NA	38097782	38084651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38088747_38088965_38089095_38089232_38089521_38089675_38097031_38097179_38097690
transcript_129931.known	chr22	-	3299	17	FSM	ENSG00000184381.20	ENST00000332509.8	3299	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	11.050311081594	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-17	True	NA	0	True	AATAAA	-20	NA	38181830	38111494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
transcript_129933.known	chr22	-	2813	17	FSM	ENSG00000184381.20	ENST00000667521.1	2813	17	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_9	7.43723739032176	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCCTGAGGGCCTGCC	13	True	NA	NA	False	NA	NA	NA	38181800	38111830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181783
transcript_129943.known	chr22	-	2870	16	FSM	ENSG00000184381.20	ENST00000655142.1	2870	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	12.2739109043894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCACCCCGAGAACCCT	-12	True	NA	-112	True	NA	NA	NA	38181825	38111606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38143104_38143289_38145437_38145654_38169217_38169468_38181783
transcript_129947.known	chr22	-	3060	16	FSM	ENSG00000184381.20	ENST00000335539.7	3060	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	13.3416640641263	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTGTGTGTGCAGT	-13	True	NA	-1	True	AATAAA	-19	NA	38181754	38111495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
transcript_129948.known	chr22	-	3011	16	FSM	ENSG00000184381.20	ENST00000402064.5	3011	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	10.4880884817015	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCACCTGTGTTGTGTGTG	-16	True	NA	-5	True	AATAAA	-15	NA	38181829	38111499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181783
transcript_129954.known	chr22	+	2374	3	FSM	ENSG00000185022.12	ENST00000338483.7	2374	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTATCCTGGACTA	-4	True	NA	12	True	AATAAA	-29	NA	38201993	38216507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38202213_38213822_38213890_38214419
transcript_129955.known	chr22	+	2458	3	FSM	ENSG00000185022.12	ENST00000538320.5	2458	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATGTGTATCCTGG	821	False	NA	8	True	AATAAA	-25	NA	38201931	38216503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38202239_38213822_38213890_38214419
transcript_129956.known	chr22	+	2216	3	FSM	ENSG00000185022.12	ENST00000426621.6	2216	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATGTGTATCCTGG	52	False	NA	8	True	AATAAA	-25	NA	38203019	38216503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38203085_38213822_38213890_38214419
transcript_12997.known	chr1	+	1251	8	FSM	ENSG00000118292.9	ENST00000369102.5	1251	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	151.465628888847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	NA	False	NA	10	True	AATAAA	-16	NA	150268199	150280916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150268821_150272283_150272414_150272798_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_129980.known	chr22	-	3593	9	FSM	ENSG00000198792.13	ENST00000361684.8	3593	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	136.816882638803	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGAGATAATATAGATT	367	False	NA	-36	True	AATAAA	-17	NA	38272664	38219323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272498
transcript_129982.known	chr22	-	3587	9	FSM	ENSG00000198792.13	ENST00000361906.8	3587	9	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_2	30.7039797909001	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGGTGAGGTTTTT	-3	True	NA	-3	True	AATATA	-18	NA	38273010	38219290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272883
transcript_129989.nnic	chr22	-	3630	9	NIC	ENSG00000198792.13	novel	3587	9	NA	NA	-42	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	136.456952919226	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGAGATAATATAGA	NA	False	NA	-38	True	AATAAA	-15	NA	38273052	38219325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38221747_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272883
transcript_13.known	ERCC-00040	+	728	1	FSM	ERCC-00040A	DQ883661	728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00040_+_0_700
transcript_130001.nic	chr22	-	1885	8	ISM	ENSG00000198792.13	ENST00000361906.8	3587	9	-42	4818	-42	1411	5prime_fragment	FALSE	canonical	3	370	junction_1	31.52517620401	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTCTGAGAAACAGA	NA	False	NA	NA	False	AAAAAG	-17	NA	38273052	38224108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272883
transcript_130015.known	chr22	-	4792	1	FSM	ENSG00000198792.13	ENST00000633056.1	4792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATTGTATTGAAATCT	7180	False	NA	-24	True	AATAAA	-29	NA	38224103	38219311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38219300_38224100
transcript_130018.known	chr22	-	1770	15	FSM	ENSG00000283900.1	ENST00000400206.7	1770	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	503.691576345716	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	396	False	NA	-76	True	NA	NA	NA	38398522	38291917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336607_38336707_38361398_38361561_38380369_38380424_38380936_38380991_38398437
transcript_130039.nnic	chr22	-	1724	11	NNC	ENSG00000213923.13	novel	2817	11	NA	NA	-91	12	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	363.242398406353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2980	False	NA	-76	True	NA	NA	NA	38317064	38291917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38316656
transcript_130040.nnic	chr22	-	1733	11	NIC	ENSG00000213923.13	novel	2817	11	NA	NA	-108	12	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	362.71856859003	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2963	False	NA	-76	True	NA	NA	NA	38317081	38291917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38316664
transcript_130043.nnic	chr22	-	1438	11	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2817	11	NA	NA	8188	12	multi-exon	FALSE	canonical	3	168	junction_10	321.675550827227	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	-76	True	NA	NA	NA	38336246	38291917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_13005.known	chr1	-	1730	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	88.706757853553	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-29	True	NA	-21	True	AATAAA	-14	NA	150269016	150265403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_130054.nnic	chr22	-	2227	10	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2817	11	NA	NA	8188	12	intron_retention	FALSE	canonical	3	168	junction_9	338.252699751072	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	-76	True	NA	NA	NA	38336246	38291917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38291939_38293254_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130060.known	chr22	-	2817	11	FSM	ENSG00000213923.13	ENST00000396832.6	2817	11	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	186.543319365771	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCAGCCCTTTGTCCA	-1	True	NA	-9	True	AATAAA	-19	NA	38317433	38290690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_130072.nic	chr22	-	2294	10	NIC	ENSG00000213923.13	novel	2817	11	NA	NA	98	47	intron_retention	FALSE	canonical	3	586	junction_1	196.631635298087	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACTCAAAAGAACAACAAA	-1	True	NA	-41	True	AATAAA	-1	NA	38317313	38291882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38291939_38293254_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_130076.known	chr22	-	1580	10	FSM	ENSG00000213923.13	ENST00000403904.5	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_9	113.146032592213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGACTGCTGCAGATGC	-7	True	NA	-7	True	NA	NA	NA	38317439	38293249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_130077.nnic	chr22	-	2789	10	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1580	10	NA	NA	8188	47	intron_retention	FALSE	canonical	3	168	junction_9	310.492957316603	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACTCAAAAGAACAACAAA	NA	False	NA	-41	True	AATAAA	-1	NA	38336246	38291882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130082.nnic	chr22	-	1422	10	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1580	10	NA	NA	8188	0	multi-exon	FALSE	canonical	3	168	junction_9	310.492957316603	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGACTGCTGCAGATGC	NA	False	NA	-7	True	NA	NA	NA	38336246	38293249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130090.nnic	chr22	-	3578	9	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1580	10	NA	NA	8188	47	intron_retention	FALSE	canonical	3	168	junction_8	329.203370843921	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACTCAAAAGAACAACAAA	NA	False	NA	-41	True	AATAAA	-1	NA	38336246	38291882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130098.nnic	chr22	-	1526	9	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	996	6	NA	NA	8188	0	multi-exon	FALSE	canonical	3	41	junction_1	530.490088856521	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTGCCTCTTTCAT	NA	False	NA	-2	True	ATTAAA	-18	NA	38336246	38297601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38297999_38298093_38298204_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_13010.known	chr1	+	509	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	124.425720813665	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	-3	True	NA	10	True	AATAAA	-16	NA	150272789	150280916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_130100.nnic	chr22	-	3615	8	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1580	10	NA	NA	8244	47	intron_retention	FALSE	canonical	3	168	junction_7	350.917514582582	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACTCAAAAGAACAACAAA	-17	True	NA	-41	True	AATAAA	-1	NA	38336190	38291882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130102.known	chr22	-	1631	8	FSM	ENSG00000213923.13	ENST00000413574.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	395.477185285868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	2633	False	NA	-4	True	AATAAA	-16	NA	38317411	38296204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_130103.nnic	chr22	-	1445	8	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1631	8	NA	NA	8244	0	multi-exon	FALSE	canonical	3	44	junction_1	486.475915463994	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	-17	True	NA	-4	True	AATAAA	-16	NA	38336190	38296204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130106.known	chr22	-	2127	8	FSM	ENSG00000213923.13	ENST00000405675.7	2127	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	394.474592441177	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-7	True	NA	-5	True	AATAAA	-15	NA	38317439	38296205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_130107.nnic	chr22	-	1969	8	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2127	8	NA	NA	8188	0	multi-exon	FALSE	canonical	3	47	junction_1	485.749326467125	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	NA	False	NA	-5	True	AATAAA	-15	NA	38336246	38296205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130117.nnic	chr22	-	3543	7	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2127	8	NA	NA	8244	0	intron_retention	FALSE	canonical	3	168	junction_6	378.973174072607	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-17	True	NA	-5	True	AATAAA	-15	NA	38336190	38296205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_130123.known	chr22	-	974	5	FSM	ENSG00000244627.5	ENST00000457665.5	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.1877477344383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAACTCCGTTCCCCC	58	False	NA	NA	False	NA	NA	NA	38398860	38350376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38351000_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_130127.known	chr22	-	679	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	23.6690139681023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	-11	True	NA	NA	False	NA	NA	NA	38398929	38361139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
transcript_130134.known	chr22	-	2065	2	FSM	ENSG00000168135.4	ENST00000303592.3	2065	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTTCTGCCGTTTTTA	691	False	NA	-3	True	TATAAA	-24	NA	38455199	38426326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38428172_38454979
transcript_130135.known	chr22	-	4761	13	FSM	ENSG00000100201.23	ENST00000403230.3	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	8.26093551333961	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGCTTTTATTGCTT	-5	True	NA	NA	False	AATAAA	-18	NA	38506311	38483437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38486441_38487878_38488116_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_130136.known	chr22	-	4791	13	FSM	ENSG00000100201.23	ENST00000396821.8	4791	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.38490217790729	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGAGCTTTTATTGC	-6	True	NA	NA	False	AATAAA	-16	NA	38506337	38483439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38486441_38487872_38488116_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_130138.nic	chr22	-	2319	11	ISM	ENSG00000100201.23	ENST00000216019.11	6441	12	-93	5653	-50	-1021	5prime_fragment	FALSE	canonical	3	58	junction_10	7.07177488329486	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTTGTATTACAAGGA	1281	False	NA	NA	False	TTTAAA	-7	NA	38506387	38491333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_130144.nic	chr22	-	1411	9	ISM	ENSG00000100201.23	ENST00000216019.11	6441	12	-93	8404	-50	225	5prime_fragment	FALSE	canonical	3	58	junction_8	6.85109480302236	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATATTTGTGGAGACA	1281	False	NA	17	True	AAGAAA	-25	NA	38506387	38494084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_130148.known	chr22	+	1694	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	13.7931142241337	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	5	True	NA	19	True	AATAAA	-21	NA	38468095	38483447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
transcript_130149.known	chr22	+	931	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10.077477638554	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGCCAATAGGTTAT	-13	True	NA	NA	False	AATAAA	-20	NA	38468077	38481635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
transcript_13015.known	chr1	-	2353	6	FSM	ENSG00000117362.13	ENST00000360244.8	2353	6	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_5	28.9717103395709	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGGGGGAACTTGGCT	40	False	NA	-23	True	AATAAA	-12	NA	150269303	150265405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_130158.known	chr22	-	269	2	FSM	ENSG00000100206.11	ENST00000464842.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGATTTCTTTTT	-19	False	NA	-10	True	AATAAA	-22	NA	38570204	38569283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38569391_38570042
transcript_130160.known	chr22	-	10087	17	FSM	ENSG00000184949.18	ENST00000535113.7	10087	17	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	3.85478598627732	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTATTTCATTAT	5	True	NA	1	True	AATAAA	-18	NA	38656392	38578117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38586200_38591434_38591541_38597203_38597357_38599763_38599922_38605253_38605349_38607388_38607477_38620211_38620292_38623171_38623280_38626179_38626304_38628237_38628343_38628833_38628936_38636450_38636598_38638745_38638823_38639654_38639725_38645562_38645646_38650026_38650263_38656119
transcript_130170.known	chr22	+	1269	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	127.215722298779	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	-7	True	NA	9	True	ATTAAA	-10	NA	38656650	38673846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_130172.nnic	chr22	+	1332	6	NIC	ENSG00000100211.11	novel	1269	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	151.435002558854	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	-22	True	NA	9	True	ATTAAA	-10	NA	38656635	38673846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_38656751_38656955_38657144_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_130173.known	chr22	+	776	5	FSM	ENSG00000100211.11	ENST00000489847.1	776	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	138.254068656224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAACTAGAAGGTGCTTC	30	False	NA	NA	False	AATAGA	-42	NA	38656687	38673413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38656751_38668016_38668133_38670766_38670990_38671069_38671189_38673158
transcript_130174.known	chr22	+	1133	5	FSM	ENSG00000100211.11	ENST00000216029.8	1146	5	17	-4	4	4	multi-exon	FALSE	canonical	3	303	junction_1	16.768646337734	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGACCAAAGTGACTAA	-3	True	NA	17	True	ATTAAA	-18	NA	38656654	38673854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38656751_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_130177.nnic	chr22	+	1019	4	NIC	ENSG00000100211.11	novel	1269	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	152.737247149039	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	-13	True	NA	9	True	ATTAAA	-10	NA	38656644	38673846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_38656751_38670883_38670990_38671069_38671189_38673158
transcript_130178.known	chr22	-	786	2	FSM	ENSG00000228274.5	ENST00000431924.3	876	2	90	0	17	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTAATCTGT	69	False	NA	NA	False	AATAAA	-21	NA	38681770	38667584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38668326_38681725
transcript_130179.known	chr22	+	2031	4	FSM	ENSG00000100216.6	ENST00000216034.6	2031	4	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_2	39.7520090337862	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAGACATCTTTTGAA	-5	True	NA	10	True	ATTAAA	-16	NA	38681956	38685421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38682096_38682322_38682442_38682878_38682997_38683766
transcript_130186.known	chr22	-	3648	4	FSM	ENSG00000100221.11	ENST00000216039.9	3648	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.64279609239471	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGCCAGCGTAAGTC	-1	True	NA	1	True	AATAAA	-28	NA	38700667	38685542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802
transcript_130192.nic	chr22	-	3985	18	FSM	ENSG00000100242.16	ENST00000689035.1	3960	18	-27	2	-25	0	multi-exon	TRUE	canonical	3	57	junction_17	7.27701980903158	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGGGATGTGGCTTT	-10	True	NA	-21	True	AATAAA	-11	NA	38756025	38734735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38736381_38738172_38738266_38738586_38738755_38738872_38738989_38739341_38739427_38739721_38739944_38740266_38740433_38741006_38741051_38741493_38741572_38742300_38742556_38745683_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38750897_38751036_38751209_38751374_38752506_38752666_38755762
transcript_13020.known	chr1	+	418	5	FSM	ENSG00000118292.9	ENST00000369098.3	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	111.918217909329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	-13	True	NA	8	True	AATAAA	-14	NA	150272779	150280914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_130206.known	chr22	+	4905	12	FSM	ENSG00000100226.16	ENST00000216044.10	4905	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	29.1680794620443	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAAGGCCTGACCCTTCT	-10	True	NA	27	True	AATAAA	-24	NA	38705943	38733587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38706148_38708844_38708957_38715906_38716088_38716651_38717001_38721741_38721866_38724296_38724412_38726005_38726151_38726257_38726441_38727212_38727349_38727982_38728162_38729461_38729663_38730611
transcript_130226.known	chr22	-	1474	4	FSM	ENSG00000100246.13	ENST00000216068.9	1474	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	6.79869268479038	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	2	True	NA	-6	True	ATTAAA	-16	NA	38794143	38778507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38779614_38780925_38781010_38782662_38782871_38794067
transcript_130229.known	chr22	-	5830	5	FSM	ENSG00000221890.6	ENST00000333039.4	5830	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.69966214673719	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTCTTTGCAGGGATG	0	True	NA	-3	True	AATAAA	-18	NA	38844028	38818451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38822834_38823082_38823263_38826499_38826748_38828286_38828513_38843234
transcript_130233.nnic	chr22	-	2936	6	NNC	ENSG00000183741.12	novel	6052	5	NA	NA	-58	19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.3912246927185	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGGATTCCTATGGG	0	True	NA	NA	False	AATAGA	-7	NA	38872307	38864209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_38866647_38867065_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_130236.known	chr22	-	6052	5	FSM	ENSG00000183741.12	ENST00000407418.8	6052	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3.69966214673719	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTGGCTTTTCAAA	9	True	NA	26	True	NA	NA	NA	38872216	38861421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_130237.known	chr22	-	3191	5	FSM	ENSG00000183741.12	ENST00000216083.6	3191	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.2576506721313	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAATAGAAAAAAAT	9	True	NA	NA	False	AAAAAG	-9	NA	38872216	38864228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38867148_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_130239.known	chr22	-	2213	4	FSM	ENSG00000183741.12	ENST00000469420.1	2213	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAATATATAGA	-24	True	NA	NA	False	NA	NA	NA	38872249	38869571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38871547_38871691_38871758_38871901_38871946_38872121
transcript_130240.known	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	17.4998542267981	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	-5	True	NA	25	True	AATAAA	-39	NA	38982346	38992779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
transcript_130246.known	chr22	-	691	5	FSM	ENSG00000249310.2	ENST00000513758.2	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7.79021822544144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCGTAATCATAGATGCG	NA	False	NA	NA	False	NA	NA	NA	38998209	38991558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38991619_38992397_38992582_38992937_38993004_38997480_38997738_38998085
transcript_130249.nnic	chr22	-	1263	4	NIC	ENSG00000249310.2	novel	691	5	NA	NA	-27	611	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	6.18241233033047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTGAGCATTTGGAG	NA	False	NA	NA	False	ATTAAA	-18	NA	38998236	38990947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38991619_38992397_38992582_38997480_38997738_38998085
transcript_13025.known	chr1	+	1179	6	FSM	ENSG00000159208.16	ENST00000369094.5	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	20.2049498885793	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-16	True	NA	20	True	ATTAAA	-21	NA	150282542	150287093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150282619_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_130253.known	chr22	+	2515	7	FSM	ENSG00000243811.12	ENST00000216099.13	2515	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	34.6874937437432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAGAAACATCCTTTG	0	True	NA	46	True	AATATA	-17	NA	39021126	39033277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39021537_39022821_39023015_39025069_39025350_39025556_39025672_39029362_39029520_39031693_39031974_39032197
transcript_130258.known	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	22.573337271116	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	-2	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
transcript_13026.known	chr1	+	771	6	FSM	ENSG00000159208.16	ENST00000447007.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	26.9027879596149	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACAGCATCTCCTGTCA	-16	True	NA	NA	False	NA	NA	NA	150282542	150286737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150282619_150283513_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_130262.known	chr22	+	1961	4	FSM	ENSG00000243811.12	ENST00000427494.6	1961	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	43.3922676163495	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGTTGAAAACCAGTTT	1290	False	NA	30	True	AATAAA	-38	NA	39021112	39033261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39021537_39022821_39023015_39031693_39031974_39032197
transcript_130263.known	chr22	+	1056	3	FSM	ENSG00000244509.4	ENST00000428892.1	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGTGAACAGAGATC	3	True	NA	-84	True	NA	NA	NA	39014261	39018926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39014380_39017765_39018046_39018268
transcript_130265.known	chr22	+	4496	7	FSM	ENSG00000128394.17	ENST00000308521.10	4496	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	20.7846096908265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTCTGAGAGGTTTTG	-11	True	NA	18	True	ATTAAA	-19	NA	39040863	39055972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39040978_39042936_39043091_39044940_39045221_39045427_39045543_39049424_39049582_39052073_39052354_39052576
transcript_130269.known	chr22	+	616	3	FSM	ENSG00000128394.17	ENST00000381565.2	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	40.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCCTCTGGGAAGTC	238	False	NA	7	True	AATAAA	-20	NA	39040856	39044423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39040978_39042936_39043091_39044082
transcript_13027.known	chr1	+	1433	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.7812460746684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-16	True	NA	20	True	ATTAAA	-21	NA	150282542	150287093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_130273.known	chr22	+	1564	8	FSM	ENSG00000239713.9	ENST00000407997.4	1564	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	20.3800622858594	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	-3	True	NA	14	True	AATAAA	-24	NA	39077274	39087743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39077379_39078931_39079086_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
transcript_130274.known	chr22	-	784	6	FSM	ENSG00000100307.13	ENST00000401405.7	784	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	16.181470884935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGGAGTTAAAGGAGCA	-1	True	NA	NA	False	NA	NA	NA	39152444	39133583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39134049_39134400_39134474_39138635_39138703_39141370_39141437_39149788_39149833_39152375
transcript_130275.known	chr22	-	4111	6	FSM	ENSG00000100307.13	ENST00000216133.10	4111	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.84081444212014	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGCATTTGATTATT	-26	True	NA	NA	False	ATTAAA	-33	NA	39152680	39130771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39134049_39134400_39134753_39138635_39138703_39141370_39141437_39149788_39149833_39152375
transcript_130277.known	chr22	-	3014	2	FSM	ENSG00000100307.13	ENST00000482294.1	3014	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-20	True	NA	NA	False	NA	NA	NA	39152674	39147117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39149833_39152375
transcript_130285.known	chr22	-	3728	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.13991411612474	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGTCTCCATAGAGG	-3	True	NA	NA	False	NA	NA	NA	39244982	39223358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
transcript_130287.known	chr22	+	1737	2	FSM	ENSG00000284633.2	ENST00000641466.1	1737	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTGCCGTGAATTGAAA	-15	True	NA	NA	False	NA	NA	NA	39242224	39251814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39242297_39250149
transcript_1303.nic	chr1	+	3368	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-34	0	intron_retention	FALSE	canonical	3	37	junction_3	131.405907269704	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	-46	True	NA	13	True	TATAAA	-15	NA	1615844	1630603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623388_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_13030.known	chr1	+	495	4	FSM	ENSG00000159208.16	ENST00000497211.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	44.1688678696759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGTCCTTTAGGCAC	685	False	NA	NA	False	NA	NA	NA	150283533	150286633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150283634_150284425_150284505_150284596_150284709_150286429
transcript_130300.known	chr22	-	1296	10	FSM	ENSG00000100316.16	ENST00000216146.9	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	22032	junction_9	4762.82577188515	9049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	0	True	NA	-2	True	AATAAA	-19	NA	39319623	39312881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319594
transcript_13031.known	chr1	+	2011	5	FSM	ENSG00000159208.16	ENST00000290363.6	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-5	True	NA	20	True	ATTAAA	-21	NA	150282553	150287093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_130310.known	chr22	-	2108	10	FSM	ENSG00000100316.16	ENST00000465618.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	14203.5775774979	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	NA	False	NA	-4	True	AATAAA	-17	NA	39320389	39312883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319726
transcript_130376.known	chr22	+	1361	4	FSM	ENSG00000100321.15	ENST00000318801.8	1361	4	0	0	0	0	multi-exon	TRUE	canonical	3	547	junction_3	31.6684210040363	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCATTCTTCTCTCCA	65	False	NA	30	True	AATAAA	-31	NA	39349924	39378389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39377597
transcript_130378.known	chr22	+	4383	4	FSM	ENSG00000100321.15	ENST00000328933.10	4383	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	248.033599874426	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	20	True	NA	19	True	AATAAA	-19	NA	39349990	39385575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39381695
transcript_13038.known	chr1	+	1085	3	FSM	ENSG00000266472.6	ENST00000614145.5	1085	3	0	0	0	0	multi-exon	FALSE	canonical	3	2035	junction_1	903.5	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	-7	True	NA	8	True	AATAAA	-17	NA	150293860	150308979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150293899_150294334_150294450_150308047
transcript_130381.nnic	chr22	+	4378	4	NNC	ENSG00000100321.15	novel	4383	4	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_3	264.923888440938	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	70	False	NA	19	True	AATAAA	-19	NA	39349929	39385575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_39350110_39374315_39374554_39376051_39376198_39381761
transcript_130383.known	chr22	+	928	4	FSM	ENSG00000100321.15	ENST00000415332.1	928	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	272.178046302212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	16	True	NA	18	True	AGTAAA	-14	NA	39349986	39377911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315_39374661_39376051_39376198_39377597
transcript_130387.nic	chr22	+	2278	3	ISM	ENSG00000100321.15	ENST00000318801.8	1361	4	5	478	5	0	intron_retention	FALSE	canonical	3	558	junction_2	30.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	70	False	NA	18	True	AGTAAA	-14	NA	39349929	39377911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_39350110_39374315_39374554_39376051
transcript_130396.known	chr22	+	1999	2	FSM	ENSG00000100321.15	ENST00000489206.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGCACCAGCCCACACTC	35	True	NA	NA	False	NA	NA	NA	39350005	39376210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315
transcript_130400.known	chr22	+	3198	11	FSM	ENSG00000100324.14	ENST00000216160.11	3198	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	8.44748483277715	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTTGCTCATGTTT	5	True	NA	15	True	AATAAA	-28	NA	39399779	39431882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39430014
transcript_130401.known	chr22	+	1660	11	FSM	ENSG00000100324.14	ENST00000331454.3	1660	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	26.9794366138361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGAGCTCAGGGCTCT	9	True	NA	NA	False	NA	NA	NA	39399783	39436823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39436489
transcript_130409.known	chr22	+	3797	7	FSM	ENSG00000100335.15	ENST00000404569.5	3797	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	70.1983301479142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGCCTGAGTACCAT	30	False	NA	NA	False	NA	NA	NA	39502376	39516178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39502438_39504202_39504535_39509421_39509572_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_13041.known	chr1	+	1462	2	FSM	ENSG00000266472.6	ENST00000581066.2	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3842	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	52	False	NA	8	True	AATAAA	-17	NA	150293919	150308979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150294450_150308047
transcript_130414.known	chr22	+	5688	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	24.6219414344198	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	-1	True	NA	17	True	AATAAA	-17	NA	39502289	39518132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_130417.known	chr22	+	3838	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	46.9535941116332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	11	True	NA	7	True	ATTAAA	-20	NA	39502301	39516380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_130422.known	chr22	+	2019	2	FSM	ENSG00000128272.18	ENST00000337304.2	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	0	True	NA	37	True	AATAAA	-17	NA	39520563	39522683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39521672_39521772
transcript_130423.known	chr22	+	1004	2	FSM	ENSG00000128272.18	ENST00000680446.1	1004	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	14	False	NA	-44	True	AAGAAA	-13	NA	39520577	39522602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39520752_39521772
transcript_130424.known	chr22	+	1910	4	FSM	ENSG00000128272.18	ENST00000404241.6	1910	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	207.079694803716	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	NA	False	NA	37	True	AATAAA	-17	NA	39519694	39522683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39519802_39520177_39520752_39521353_39521672_39521772
transcript_130427.known	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	365.437751197109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-5	True	NA	-69	True	NA	NA	NA	39532761	39529155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
transcript_130429.known	chr22	-	820	4	FSM	ENSG00000187051.9	ENST00000334678.8	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_3	121.282956574927	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	8	True	NA	-6	True	AATAAA	-14	NA	39532748	39529092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39529624_39529819_39529918_39532394_39532524_39532686
transcript_13043.nic	chr1	+	2533	17	NIC	ENSG00000117360.13	novel	2414	16	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_4	96.867096451788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGATATTTTTCAC	NA	False	NA	29	True	ATTAAA	-15	NA	150321471	150353195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150321593_150324894_150325088_150325750_150325882_150327556_150327653_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_130430.known	chr22	-	647	3	FSM	ENSG00000187051.9	ENST00000491966.1	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_2	140.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTCCTGCTGGCTCCAGG	24	True	NA	NA	False	NA	NA	NA	39532732	39529445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39529918_39532394_39532524_39532686
transcript_130431.known	chr22	-	869	2	FSM	ENSG00000187051.9	ENST00000472291.1	869	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCCCGGGCATTGTGT	-4	True	NA	NA	False	AAAAAG	-28	NA	39532760	39531728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39532524_39532686
transcript_130435.known	chr22	+	15561	5	FSM	ENSG00000133477.17	ENST00000333407.11	15561	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	6.89202437604511	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTGTCTCTCTCTTT	-5	True	NA	10	True	AATAAA	-20	NA	39994953	40043534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39995532_40019167_40019336_40019886_40020009_40021289_40021964_40029515
transcript_130442.known	chr22	+	18280	23	FSM	ENSG00000100354.21	ENST00000454349.7	18280	23	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	21.5522141295111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	-5	True	NA	7	True	AATAAA	-20	NA	40177924	40335808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40281118_40281290_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_130445.nic	chr22	+	5886	22	NIC	ENSG00000100354.21	novel	18280	23	NA	NA	-20	205	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	15.8128223753359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTCTAGTTTTTCACT	-1	True	NA	2	True	ATTAAA	-5	NA	40177904	40323565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_130447.nic	chr22	+	6129	22	NIC	ENSG00000100354.21	novel	18280	23	NA	NA	-20	448	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	15.8128223753359	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGATTGGCTGGTTGAT	-1	True	NA	NA	False	AAAAAG	-8	NA	40177904	40323808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_130452.known	chr22	+	17933	21	FSM	ENSG00000100354.21	ENST00000335727.13	17933	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.0838641081295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	12	False	NA	7	True	AATAAA	-20	NA	40177941	40335808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_13046.known	chr1	+	2414	16	FSM	ENSG00000117360.13	ENST00000324862.7	2414	16	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	49.6854103334168	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTCTACAGGTGATC	-19	True	NA	67	True	TTTAAA	-39	NA	150321532	150353233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150321593_150324894_150325088_150325750_150325882_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_130470.nic	chr22	+	1005	5	ISM	ENSG00000100354.21	ENST00000301923.13	15958	24	-517	89720	-517	-275	5prime_fragment	FALSE	canonical	1	4	junction_4	5.40254569624358	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCACTCAGAAGGTAGG	570	False	NA	63	True	GATAAA	-10	NA	40044299	40246087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114_40156183_40246014
transcript_130471.nic	chr22	+	1355	5	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-20	70454	-20	18992	5prime_fragment	FALSE	canonical	3	41	junction_3	8.32165848854662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACACTAACTCCTTGA	-1	True	NA	NA	False	NA	NA	NA	40177904	40265354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687
transcript_130476.known	chr22	+	564	2	FSM	ENSG00000100354.21	ENST00000489500.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTAGAGATGGGG	-5	True	NA	NA	False	NA	NA	NA	40177924	40246362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40178141_40246014
transcript_130480.known	chr22	-	4522	15	FSM	ENSG00000196588.21	ENST00000355630.10	4522	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	22.0153008016642	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTAGTCCATCTTATT	-24	True	NA	-7	True	AATAAA	-14	NA	40636719	40410288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
transcript_130484.nic	chr22	-	4479	14	NIC	ENSG00000196588.21	novel	4522	15	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_13	21.0071838938	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTAGTCCATCTTAT	NA	False	NA	-8	True	AATAAA	-13	NA	40636739	40410289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40636477
transcript_130487.known	chr22	-	4343	14	FSM	ENSG00000196588.21	ENST00000402042.7	4343	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	31.6360591206678	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTAGTCCATCTTAT	4	True	NA	-8	True	AATAAA	-13	NA	40636691	40410289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
transcript_130488.nic	chr22	-	4329	13	NIC	ENSG00000196588.21	novel	4343	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	31.9508085448032	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTAGTCCATCTTAT	NA	False	NA	-8	True	AATAAA	-13	NA	40636739	40410289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40636477
transcript_13050.nic	chr1	+	2124	10	NIC	ENSG00000117360.13	novel	2414	16	NA	NA	20	-3240	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	112.265008345278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAAAAACCCAA	1	True	NA	NA	False	AAAAAG	-8	NA	150321552	150341135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150321593_150324894_150325088_150325750_150325882_150327556_150327653_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397
transcript_130511.known	chr22	+	2986	22	FSM	ENSG00000100359.21	ENST00000248929.14	2986	22	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	43.74000695721	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTGTGTTTATTTT	-29	True	NA	12	True	NA	NA	NA	40370593	40410289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_130524.nic	chr22	+	3093	21	NIC	ENSG00000100359.21	novel	2986	22	NA	NA	-54	0	intron_retention	TRUE	canonical	3	284	junction_3	43.691646798902	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	40370536	40410108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409373_40409464_40409526_40409681
transcript_13054.known	chr1	+	8186	11	FSM	ENSG00000163125.16	ENST00000369068.5	8186	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	16.3340135912763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	-14	True	NA	15	True	AATAAA	-16	NA	150364146	150476566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150441880_150441959_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
transcript_130554.nic	chr22	+	2779	21	NIC	ENSG00000100359.21	novel	2986	22	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_2	62.7388237059	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	40370536	40410108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40370689_40400695_40400814_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_13057.known	chr1	+	7605	10	FSM	ENSG00000163125.16	ENST00000401000.8	7605	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	18.9665071919352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	15	False	NA	15	True	AATAAA	-16	NA	150364649	150476566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
transcript_130579.known	chr22	+	2973	20	FSM	ENSG00000100359.21	ENST00000485962.5	2973	20	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	41.96139896107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	16	True	NA	21	True	AATAAA	-21	NA	40370638	40410108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_1306.nic	chr1	+	3109	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-34	0	intron_retention	FALSE	canonical	3	35	junction_3	131.149932173605	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	-46	True	NA	13	True	TATAAA	-15	NA	1615844	1630603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623430_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_13060.known	chr1	+	1043	3	FSM	ENSG00000163125.16	ENST00000369067.7	1043	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGGTATTTTTAAGCC	14	True	NA	NA	False	TTTAAA	-45	NA	150364707	150441623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150364920_150417595_150417726_150440922
transcript_13065.known	chr1	+	2727	18	FSM	ENSG00000143374.18	ENST00000369064.8	2727	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_8	37.5484922913877	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	-5	True	NA	15	True	AATAAA	-29	NA	150487418	150507602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_130658.known	chr22	+	1859	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	332.83805611383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	-1	True	NA	NA	False	NA	NA	NA	40346499	40367837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
transcript_130666.known	chr22	+	4359	13	FSM	ENSG00000239900.14	ENST00000623063.3	4359	13	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_8	81.7015231736159	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTCTGCGTGTTCAC	-1	True	NA	34	True	NA	NA	NA	40346499	40369367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_130669.known	chr22	+	2002	13	FSM	ENSG00000239900.14	ENST00000625194.4	2002	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	343.617792758175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	40346499	40366968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361678_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_130673.known	chr22	+	1808	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	320.692716134648	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	2	True	NA	NA	False	AGTAAA	-23	NA	40346502	40366996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
transcript_130674.known	chr22	+	3278	12	FSM	ENSG00000239900.14	ENST00000681159.1	3278	12	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_8	83.0086125174136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAAGTGATGAAGTTTG	-1	True	NA	NA	False	NA	NA	NA	40346499	40366941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40363072_40364275_40364366_40364879_40365057_40366435
transcript_130678.known	chr22	+	4372	12	FSM	ENSG00000239900.14	ENST00000679723.1	4372	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	354.030838643675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAAAATATACATTCAT	-1	True	NA	92	True	ATTAAA	-17	NA	40346499	40369425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_130685.known	chr22	+	1336	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	388.143571502563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	-16	True	NA	NA	NA	40346460	40366614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
transcript_13069.nic	chr1	+	2656	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	69.1663529109349	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	4556	False	NA	15	True	AATAAA	-29	NA	150487387	150507602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504905_150504979_150505590_150505706_150506915
transcript_130691.known	chr22	+	2851	2	FSM	ENSG00000128285.5	ENST00000249016.5	2115	2	-734	-2	-523	2	multi-exon	FALSE	canonical	2	8	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGGATGTTCTTGTG	NA	False	NA	19	True	AATAAA	-29	NA	40678749	40682814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40679735_40680948
transcript_130697.known	chr22	-	2226	9	FSM	ENSG00000100372.15	ENST00000435456.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_6	23.1378342763535	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	11	True	NA	-2	True	ATTAAA	-18	NA	40819346	40769629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40794513_40794581_40799022_40799084_40819194
transcript_130703.known	chr22	-	2058	8	FSM	ENSG00000100372.15	ENST00000263255.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	139.293992427996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	27	True	NA	-2	True	ATTAAA	-18	NA	40819330	40769629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40794513_40794581_40799022_40799084_40819194
transcript_130705.known	chr22	-	1243	7	FSM	ENSG00000100372.15	ENST00000447566.5	1243	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	153.042205507718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTTCTCTTTCCCTG	7	True	NA	35	True	AATATA	-1	NA	40819350	40770488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40819194
transcript_130706.known	chr22	-	2060	7	FSM	ENSG00000100372.15	ENST00000544408.5	2060	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	147.500282485605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	NA	False	NA	-2	True	ATTAAA	-18	NA	40819399	40769629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40799022_40799084_40819194
transcript_130712.known	chr22	-	3212	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_3	83.4618733166268	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAACCAGAAATGTT	8	True	NA	-13	True	AATATA	-22	NA	40856639	40824534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
transcript_13073.nnic	chr1	+	2611	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	66.9743421020319	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	4556	False	NA	15	True	AATAAA	-29	NA	150487387	150507602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_130731.known	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	7.55718936583642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	-4	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_130740.known	chr22	+	1418	3	FSM	ENSG00000196236.13	ENST00000482652.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	-10	True	NA	12	True	ATTAAA	-25	NA	40857096	40862770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40857246_40860677_40860794_40861617
transcript_130744.known	chr22	+	1169	5	FSM	ENSG00000100387.9	ENST00000216225.9	1169	5	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_4	176.918590035078	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTATGAGAATCTAACG	-2	True	NA	NA	False	NA	NA	NA	40951377	40973309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40951477_40953554_40953634_40964046_40964118_40967798_40967885_40972475
transcript_130754.nic	chr22	+	4084	20	ISM	ENSG00000100393.14	ENST00000263253.9	8779	31	0	19355	0	303	5prime_fragment	FALSE	canonical	3	101	junction_8	20.4565616399097	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAACTGCATTATTTT	-15	True	NA	NA	False	NA	NA	NA	41092591	41160722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41093099_41117186_41117822_41125863_41126041_41127486_41127749_41129889_41130004_41131387_41131634_41135812_41135907_41137652_41137791_41140139_41140258_41141047_41141223_41146738_41146817_41147836_41147947_41149037_41149176_41149760_41150199_41151832_41152013_41152205_41152351_41154994_41155114_41157168_41157409_41158411_41158501_41160641
transcript_130770.known	chr22	+	3282	18	FSM	ENSG00000100395.15	ENST00000452106.5	3282	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	72.3408885226684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	2	True	NA	13	True	ATTAAA	-17	NA	41205323	41231271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227574_41227680_41227803_41227870_41229539_41229657_41230138
transcript_130776.known	chr22	+	3189	17	FSM	ENSG00000100395.15	ENST00000216237.10	3189	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	24.4648184900277	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	-10	True	NA	13	True	ATTAAA	-17	NA	41205311	41231271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
transcript_130791.known	chr22	+	3055	16	FSM	ENSG00000100395.15	ENST00000466589.5	3055	16	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	25.2345442245788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGCCATGTAAATTAAGTT	-13	True	NA	NA	False	AATACA	-26	NA	41205308	41230654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227870_41229539_41229657_41230138
transcript_130794.nic	chr22	+	3108	16	NIC	ENSG00000100395.15	novel	3189	17	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	57.5841027444979	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCGTTTGTTAGATCTC	NA	False	NA	12	True	ATTAAA	-16	NA	41205257	41231270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_41205387_41209695_41209934_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
transcript_130796.nic	chr22	+	1977	15	ISM	ENSG00000100395.15	ENST00000216237.10	3189	17	-54	3418	-24	43	5prime_fragment	TRUE	canonical	3	187	junction_3	18.5037227363047	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTTGGGAAGAAAAGTAA	NA	False	NA	NA	False	AAAAAG	-4	NA	41205257	41227853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803
transcript_13080.known	chr1	+	2162	16	FSM	ENSG00000143374.18	ENST00000606933.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	56.7244411362705	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCAGGCGCAGTGGCT	-4	True	NA	NA	False	AATAAA	-1	NA	150487419	150507284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_130810.known	chr22	-	2530	6	FSM	ENSG00000100399.16	ENST00000216241.14	2530	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.78567765543682	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGGGTTGTATTTAGG	0	True	NA	NA	False	AATAAA	-17	NA	41240931	41229512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41229731_41235144_41235344_41236483_41236651_41237175_41238886_41239442_41239621_41240873
transcript_130825.known	chr22	-	3469	17	FSM	ENSG00000100401.20	ENST00000405486.5	3469	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	301.936141582537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	232	False	NA	-21	True	AATAAA	-18	NA	41285965	41245610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41284900_41285154_41285543
transcript_130843.nnic	chr22	-	3471	16	NIC	ENSG00000100401.20	novel	3469	17	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_15	230.762407876346	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-23	True	NA	-21	True	AATAAA	-18	NA	41286220	41245610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285543
transcript_130844.nnic	chr22	-	2956	16	NNC	ENSG00000100401.20	novel	3469	17	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_15	223.788729733102	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	NA	False	NA	-21	True	AATAAA	-18	NA	41286247	41245610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41286085
transcript_130846.nnic	chr22	-	3415	16	NNC	ENSG00000100401.20	novel	3469	17	NA	NA	-16466	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_15	217.07168298872	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	NA	False	NA	-21	True	AATAAA	-18	NA	41302653	41245610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41302032
transcript_130874.known	chr22	-	3828	16	FSM	ENSG00000100401.20	ENST00000356244.8	3828	16	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_15	75.9893559797833	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATGTATTAATATAT	10	True	NA	-3	True	CATAAA	-17	NA	41286187	41244778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
transcript_130875.known	chr22	+	5906	23	FSM	ENSG00000100403.12	ENST00000352645.5	5906	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	5.50975843540612	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCCCGAGATGTCA	-38	True	NA	19	True	AATAAA	-15	NA	41301524	41360147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002_41346209_41348066_41348168_41349119_41349302_41351560_41351647_41355468_41355603_41355756_41355863_41355953_41356063_41356342_41356477_41356644_41356809_41357176
transcript_130884.nic	chr22	+	2760	14	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-64	13162	-64	10142	5prime_fragment	FALSE	canonical	3	24	junction_4	5.43492976389406	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTCCATCGTCACGG	NA	False	NA	NA	False	NA	NA	NA	41301460	41346985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002
transcript_130885.nnic	chr22	+	2701	14	NNC	ENSG00000100403.12	novel	5906	23	NA	NA	-64	10142	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_13	8.99046174380737	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTCCATCGTCACGG	NA	False	NA	NA	False	NA	NA	NA	41301460	41346985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346061
transcript_130891.nic	chr22	+	1419	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-64	20671	-64	2633	5prime_fragment	FALSE	canonical	3	24	junction_4	5.82961190818051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGCAC	NA	False	NA	NA	False	AATACA	-5	NA	41301460	41339476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_130892.nic	chr22	+	1585	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-64	20505	-64	2799	5prime_fragment	FALSE	canonical	3	24	junction_4	5.82961190818051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGCACAATGTCTGG	NA	False	NA	NA	False	AAAAAG	-4	NA	41301460	41339642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_130894.nic	chr22	+	1976	8	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	24	20671	24	2633	intron_retention	FALSE	canonical	3	24	junction_4	5.94532915619566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGCAC	-14	True	NA	NA	False	AATACA	-5	NA	41301548	41339476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312
transcript_130895.nic	chr22	+	2230	8	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-64	20505	-64	2799	intron_retention	FALSE	canonical	3	24	junction_4	5.94532915619566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGCACAATGTCTGG	NA	False	NA	NA	False	AAAAAG	-4	NA	41301460	41339642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312
transcript_130898.known	chr22	+	5262	7	FSM	ENSG00000100403.12	ENST00000486331.1	5262	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	5.98377435700541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTGGGTGT	152	False	NA	NA	False	NA	NA	NA	41301714	41336843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170
transcript_1309.nic	chr1	+	3306	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-34	0	intron_retention	FALSE	canonical	2	3	junction_3	132.695368953963	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	-46	True	NA	13	True	TATAAA	-15	NA	1615844	1630603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623430_1623680_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_130907.known	chr22	+	4381	4	FSM	ENSG00000167074.15	ENST00000266304.9	4381	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	2.82842712474619	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGATTGTCTTTTCTG	-4	True	NA	11	True	ATTAAA	-17	NA	41381941	41399326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41382202_41387350_41387669_41394095_41394317_41395744
transcript_130912.known	chr22	-	4337	2	FSM	ENSG00000183864.5	ENST00000327492.4	4337	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTGCCTGCTCCTGGC	3	True	NA	-7	True	ATTAAA	-17	NA	41446801	41433493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41437408_41446378
transcript_130913.known	chr22	-	777	2	FSM	ENSG00000183864.5	ENST00000434408.1	777	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGGTGAGAAGGGAGCT	19	True	NA	NA	False	NA	NA	NA	41446785	41437041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41437408_41446374
transcript_130920.known	chr22	+	3237	19	FSM	ENSG00000100412.17	ENST00000677153.1	3237	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	139.717174638227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGGCTAGTTGCTGG	1	True	NA	NA	False	NA	NA	NA	41469127	41529273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41477912_41478128_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_130925.known	chr22	+	3037	18	FSM	ENSG00000100412.17	ENST00000677532.1	3037	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	140.61931726311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGGCTAGTTGCTGG	10	True	NA	NA	False	NA	NA	NA	41469136	41529273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41469347_41469509_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_130945.known	chr22	-	4176	7	FSM	ENSG00000100413.17	ENST00000396504.6	4176	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	97.8536321928488	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGCTTGTTTTTGGTC	-41	True	NA	-3	True	AATAAA	-35	NA	41544489	41525803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544427
transcript_130951.known	chr22	-	1464	6	FSM	ENSG00000100413.17	ENST00000431534.5	1464	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	117.792359684319	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCTTAAGATCTGAACC	-7	True	NA	-25	True	AATAAA	-14	NA	41544455	41528842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532603_41532746_41540698_41540796_41543990
transcript_130952.known	chr22	-	4468	6	FSM	ENSG00000100413.17	ENST00000355209.9	4468	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	38.7628688308799	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTTTGGTCGGTGC	-22	True	NA	2	True	AATAAA	-40	NA	41544470	41525798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990
transcript_130957.known	chr22	-	1330	5	FSM	ENSG00000100413.17	ENST00000337566.9	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	132.320633311665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-14	True	NA	-24	True	AATAAA	-15	NA	41544462	41528841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41540698_41540796_41543990
transcript_130960.known	chr22	-	504	4	FSM	ENSG00000100410.8	ENST00000459687.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	303.549007575383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCACCAGGAGTGCCTGC	56	False	NA	NA	False	AAAACA	-39	NA	41468625	41460302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41460488_41467447_41467615_41468019_41468148_41468601
transcript_130962.known	chr22	-	1053	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_3	17.0163320241336	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTCCCCATTTAACT	-11	True	NA	-22	True	AATAAA	-22	NA	41468692	41459716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
transcript_130964.known	chr22	+	1460	10	FSM	ENSG00000100412.17	ENST00000466237.2	1460	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	123.864123085155	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAAGAGATTTCTA	-10	True	NA	19	True	AATAAA	-32	NA	41469116	41521590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41521298
transcript_130967.known	chr22	-	1242	8	FSM	ENSG00000100417.12	ENST00000216259.8	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	16.2279677956148	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-19	True	NA	NA	False	ATTAAA	-15	NA	41589840	41576899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41586075_41586194_41589718
transcript_13097.known	chr1	+	2046	10	FSM	ENSG00000143369.15	ENST00000369047.9	2046	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.3356476460191	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCATCTTGAATTTAT	1	True	NA	NA	False	ACTAAA	-14	NA	150508108	150513789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150508280_150509530_150509582_150509660_150509763_150509921_150510003_150510101_150510183_150510875_150511199_150511456_150511832_150512351_150512573_150512724_150512813_150513236
transcript_130971.known	chr22	-	1405	7	FSM	ENSG00000100417.12	ENST00000485648.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	10.2252411001186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTTTGTCACAGTATT	3	True	NA	NA	False	NA	NA	NA	41589818	41576936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589718
transcript_130973.known	chr22	+	2530	4	FSM	ENSG00000172346.15	ENST00000306149.12	2530	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.24264068711928	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCCTGAAGCTGCCTCT	7	True	NA	13	True	AATAAA	-19	NA	41561009	41576666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41561184_41571842_41572142_41573654_41573778_41574732
transcript_130976.nnic	chr22	-	3303	7	NNC	ENSG00000100418.8	novel	3780	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.8164687941451	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	18	True	NA	0	True	AATAAA	-20	NA	41621037	41598027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41599670_41600140_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_130989.known	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	10.0876161703348	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	12	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_130997.known	chr22	+	2122	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	0	0	0	0	multi-exon	FALSE	canonical	3	4455	junction_1	410.280053405259	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTTTTGTGTGAAG	-4	True	NA	16	True	AATAAA	-22	NA	41621294	41664041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_13100.known	chr1	+	4212	19	FSM	ENSG00000143382.16	ENST00000271643.9	4212	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	2.45452467048606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGAGCTCTTCCTTGTC	-5	True	NA	9	True	ATTAAA	-19	NA	150549407	150560933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150549500_150549821_150549896_150552204_150552309_150552542_150552601_150552897_150553254_150553425_150554123_150554364_150554468_150555428_150555566_150556161_150556367_150556620_150556794_150556938_150557051_150557149_150557336_150557493_150557624_150557944_150558150_150558472_150558650_150558961_150559166_150559286_150559467_150559760_150559906_150560059
transcript_131001.known	chr22	+	2006	13	FSM	ENSG00000196419.13	ENST00000402580.7	2006	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1474.5731091291	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	-4	True	NA	23	True	AATAAA	-29	NA	41621294	41664048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636235_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_131002.nnic	chr22	+	2141	13	NNC	ENSG00000196419.13	novel	2709	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	1472.55905371115	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	40	False	NA	14	True	AATAAA	-20	NA	41621338	41664039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_41621411_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_131004.known	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1504.59941835766	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	-4	True	NA	14	True	AATAAA	-20	NA	41621460	41664039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_131009.known	chr22	+	2148	12	FSM	ENSG00000196419.13	ENST00000428575.6	2148	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	1461.33204829426	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	2006	False	NA	23	True	AATAAA	-29	NA	41621162	41664048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621346_41621989_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_13102.known	chr1	+	1826	3	FSM	ENSG00000143382.16	ENST00000483335.1	1826	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTGTGTGCCTGAG	8	True	NA	NA	False	NA	NA	NA	150549420	150551906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150549500_150549821_150550277_150550614
transcript_131020.known	chr22	+	359	3	FSM	ENSG00000196419.13	ENST00000464116.2	359	3	0	0	0	0	multi-exon	FALSE	canonical	3	4455	junction_1	740.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCGAGACGGGCAGATC	-14	True	NA	NA	False	NA	NA	NA	41621284	41628318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621346_41621989_41622087_41628117
transcript_131023.known	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4792	junction_3	351.060753848336	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	51	False	NA	14	True	AATAAA	-20	NA	41621349	41664039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_131024.known	chr22	+	5014	4	FSM	ENSG00000184208.12	ENST00000656592.1	5014	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTGTTCTGATTTCT	-25	True	NA	3	True	AATAAA	-15	NA	41688938	41698136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41689305_41690783_41690844_41693462_41693852_41693937
transcript_131025.known	chr22	-	1036	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1033.91951115914	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTCCAGCTTTCAG	-15	True	NA	-115	True	NA	NA	NA	41688895	41674614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
transcript_131027.known	chr22	+	4852	3	FSM	ENSG00000184208.12	ENST00000472110.3	4852	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTACTGGGGCCACC	-27	True	NA	NA	False	NA	NA	NA	41688936	41697886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41689305_41690783_41690844_41693462
transcript_13103.known	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	21.5	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-7	True	NA	31	True	AATAAA	-14	NA	150579610	150574557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150577492_150578243_150578492_150578842
transcript_131030.known	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	1846	junction_2	328.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	13	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41675196_41680243_41680365_41688793
transcript_131034.known	chr22	-	640	2	FSM	ENSG00000100138.15	ENST00000469522.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATGCTTGGTACAGA	-13	True	NA	-22	True	AATAAA	-17	NA	41688847	41687741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41688328_41688793
transcript_131040.known	chr22	+	5365	20	FSM	ENSG00000198911.12	ENST00000612482.4	5365	20	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_10	271.019108811021	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGTGTGTGAGGGTCTG	NA	False	NA	14	True	AATAAA	-22	NA	41833078	41907307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41878658_41878759_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
transcript_131052.known	chr22	+	5237	19	FSM	ENSG00000198911.12	ENST00000361204.9	5237	19	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_8	76.8698796347551	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGAGGTGTGTGAGGGTC	-15	True	NA	12	True	AATAAA	-20	NA	41833104	41907305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
transcript_13106.known	chr1	-	1110	2	FSM	ENSG00000143384.14	ENST00000307940.3	1110	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTTGAGAACAGGAAAG	315	False	NA	NA	False	NA	NA	NA	150579530	150577069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150577492_150578842
transcript_13107.known	chr1	-	725	5	FSM	ENSG00000143420.19	ENST00000361631.9	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	374.696543885849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAATTAGGGCTTGGA	5	True	NA	NA	False	NA	NA	NA	150629128	150622543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629060
transcript_13108.known	chr1	-	633	5	FSM	ENSG00000143420.19	ENST00000339643.9	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	572.473798527059	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGGCTGGAGAGGCA	18	True	NA	NA	False	NA	NA	NA	150629576	150622730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629413
transcript_131085.nnic	chr22	+	4865	17	NIC	ENSG00000198911.12	novel	5237	19	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_7	208.692918842495	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGAGGTGTGTGAGGGTC	-18	True	NA	12	True	AATAAA	-20	NA	41833101	41907305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
transcript_131108.known	chr22	+	7135	7	FSM	ENSG00000100147.14	ENST00000255784.6	7135	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	6.42045342808607	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGATCCCATGGTA	0	True	NA	19	True	AATAAA	-20	NA	41800678	41832164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41800767_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_13111.known	chr1	-	792	4	FSM	ENSG00000143420.19	ENST00000361532.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	440.182537893845	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGGGTTCTAGTT	-7	True	NA	NA	False	NA	NA	NA	150629140	150622440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629060
transcript_13112.known	chr1	-	360	4	FSM	ENSG00000143420.19	ENST00000638926.1	360	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	552.514856512173	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCGGGGCTCTGCCA	124	False	NA	NA	False	NA	NA	NA	150629470	150622843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625803_150627466_150627593_150629413
transcript_131123.known	chr22	-	938	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_3	43.9909081515715	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-7	True	NA	-21	True	AAAAAG	-12	NA	41947152	41938736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_131126.known	chr22	-	818	5	FSM	ENSG00000100162.15	ENST00000407253.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	192.40500903043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATCACTGGTCTC	9	True	NA	-33	True	NA	NA	NA	41947136	41938748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_131131.known	chr22	-	689	4	FSM	ENSG00000100162.15	ENST00000396437.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	46.8852025933793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACATATACACATACTT	-6	True	NA	-16	True	AATAAA	-22	NA	41947151	41944920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41945305_41945912_41946006_41946416_41946497_41947019
transcript_131132.known	chr22	-	1002	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_3	49.103844045044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	452	False	NA	-21	True	AAAAAG	-12	NA	41946693	41938736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
transcript_131133.known	chr22	-	905	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	206.4175918429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	457	False	NA	-21	True	AAAAAG	-12	NA	41946688	41938736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
transcript_131135.known	chr22	+	2586	11	FSM	ENSG00000100167.21	ENST00000396426.7	2586	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	54.4886226656538	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGTCTTATTT	-3	True	NA	21	True	ACTAAA	-21	NA	41976809	41998221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41977075_41981644_41981837_41985983_41986113_41987205_41987288_41987621_41987760_41989566_41989685_41991572_41991669_41992663_41992764_41994289_41994342_41994620_41994715_41996901
transcript_131138.known	chr22	-	1869	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	53.7132303172236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTCAGGTCACCAATA	-27	True	NA	-46	True	NA	NA	NA	42070842	42059801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
transcript_131141.known	chr22	-	3696	9	FSM	ENSG00000198951.12	ENST00000396398.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	13.3925119003121	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	3	True	NA	19	True	NA	NA	NA	42070812	42058333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281
transcript_131148.nnic	chr22	-	3543	8	NIC	ENSG00000198951.12	novel	3696	9	NA	NA	-1	0	intron_retention	FALSE	canonical	2	5	junction_6	65.8368422383574	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	-16	True	NA	19	True	NA	NA	NA	42070831	42058333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42068438_42068575_42070281
transcript_131151.nnic	chr22	-	2081	8	NIC	ENSG00000198951.12	novel	1856	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	5	junction_6	65.8368422383574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-16	True	NA	-40	True	NA	NA	NA	42070831	42059795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42068438_42068575_42070281
transcript_131154.known	chr22	+	540	1	FSM	ENSG00000286659.1	ENST00000662963.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAATAGATTGATTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	42070948	42071488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42070900_42071500
transcript_131155.known	chr22	+	2335	3	FSM	ENSG00000177096.9	ENST00000321753.8	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	3	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCCGCTCCCTGGGTT	-15	True	NA	3	True	AGTAAA	-16	NA	42074247	42079438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42074342_42075570_42075653_42077279
transcript_131156.known	chr22	+	537	3	FSM	ENSG00000177096.9	ENST00000419475.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCTGGGTGAAGGTG	56	False	NA	NA	False	NA	NA	NA	42074356	42077618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42074473_42075570_42075653_42077279
transcript_131159.known	chr22	+	1562	3	FSM	ENSG00000183172.9	ENST00000331479.4	1562	3	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	38	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTCCTCTGAGTT	-3	True	NA	4	True	AATAAA	-13	NA	42079699	42084284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42079955_42081924_42082066_42083118
transcript_13116.known	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	24	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	17	True	NA	-3	True	ATTAAA	-28	NA	150629577	150623280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150625809_150627466_150627593_150629413
transcript_131160.known	chr22	+	591	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	321.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	-12	True	NA	9	True	AATAAA	-15	NA	42079690	42083353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42079906_42081924_42082066_42083118
transcript_131162.known	chr22	-	1183	3	FSM	ENSG00000184983.11	ENST00000617763.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	4343	junction_1	404	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTTGGATGGTGGT	NA	False	NA	-2	True	AATAAA	-24	NA	42090884	42085526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42086315_42087059_42087176_42090605
transcript_131169.known	chr22	+	1521	4	FSM	ENSG00000237037.9	ENST00000417327.5	1521	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.11805216802087	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTGTGGTTCTCTGT	-3	True	NA	NA	False	NA	NA	NA	42090955	42125349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42091182_42091296_42091601_42124046_42124563_42124874
transcript_13117.known	chr1	-	1369	3	FSM	ENSG00000143420.19	ENST00000513281.5	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACCTTATAGATATC	17	True	NA	NA	False	AGTAAA	-29	NA	150629116	150624621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150625809_150627466_150627593_150629060
transcript_131177.known	chr22	-	6237	4	FSM	ENSG00000100207.21	ENST00000335626.8	6237	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	23.4710223230453	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTTTTAGTCTGGA	3913	False	NA	NA	False	ATTAAA	-25	NA	42215440	42161055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42161359_42169846_42169897_42179608_42179703_42209650
transcript_131179.known	chr22	+	551	4	FSM	ENSG00000182057.5	ENST00000446578.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGAAGAGGCTGAGCT	5	True	NA	NA	False	NA	NA	NA	42269767	42275033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42270026_42273893_42273975_42274655_42274822_42274987
transcript_131181.known	chr22	+	4829	2	FSM	ENSG00000182057.5	ENST00000609564.2	4829	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGACAGAGGGCAATGT	193	False	NA	NA	False	AATAAA	-14	NA	42269702	42279493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42270026_42274987
transcript_131182.known	chr22	-	780	2	FSM	ENSG00000229891.3	ENST00000432473.2	896	2	116	0	40	0	multi-exon	FALSE	canonical	3	118	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTTCCATTTCTGT	9082	False	NA	-15	True	AATAAA	-18	NA	42369168	42364399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42364726_42368714
transcript_131183.known	chr22	-	1142	2	FSM	ENSG00000229891.3	ENST00000424852.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCCCTGTATTAAATG	9014	False	NA	-140	True	AATAAA	-27	NA	42369236	42364524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42365145_42368714
transcript_131201.nic	chr22	-	2726	8	NIC	ENSG00000189306.11	novel	5419	7	NA	NA	-27	-2836	intron_retention	FALSE	canonical	3	36	junction_6	424.939467477908	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACTATTAGCTGGGCA	-3	True	NA	NA	False	NA	NA	NA	42519823	42511179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42518612_42518729_42519713
transcript_131203.known	chr22	-	5419	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_4	149.846310153659	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGAACCTTTTTTTTT	-1	True	NA	-7	True	AATAAA	-14	NA	42519796	42508343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
transcript_131225.known	chr22	+	596	3	FSM	ENSG00000172250.17	ENST00000434218.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCCCCCCCCCCAACT	946	False	NA	NA	False	NA	NA	NA	42501595	42502653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42501775_42501918_42502033_42502350
transcript_13123.known	chr1	-	703	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1345	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAATCAGTTTCTTCA	17	True	NA	-27	True	AATAAA	-11	NA	150629577	150627053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150627593_150629413
transcript_131231.known	chr22	+	1337	12	FSM	ENSG00000183569.18	ENST00000327678.10	1337	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	6.93297307815913	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	-2	True	NA	4	True	AATAAA	-18	NA	42553955	42574382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_131238.known	chr22	-	2375	8	FSM	ENSG00000182841.13	ENST00000357802.7	2387	8	1	11	0	-11	multi-exon	FALSE	canonical	3	54	junction_1	167.040994601777	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCGGGTTGGAGGGT	-18	True	NA	NA	False	AATAAA	-13	NA	42582038	42555222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_13125.known	chr1	-	3124	5	FSM	ENSG00000143457.11	ENST00000271732.8	3124	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	14.1155942134931	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCTCTGTGCACAA	-7	True	NA	-18	True	AATAAA	-17	NA	150697154	150646229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
transcript_131250.known	chr22	-	833	7	FSM	ENSG00000182841.13	ENST00000458605.6	2359	7	37	1489	-4	-353	multi-exon	FALSE	canonical	3	129	junction_5	167.714042345893	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGAGAGCCGCAGTGGA	19	True	NA	NA	False	NA	NA	NA	42582001	42574732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_131260.nic	chr22	-	3475	6	NIC	ENSG00000182841.13	novel	2359	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	129	junction_4	179.165398445124	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGACAGGAAGGCCTTGC	-22	True	NA	NA	False	NA	NA	NA	42582042	42573243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_131295.known	chr22	-	3337	9	FSM	ENSG00000100227.19	ENST00000445215.5	3337	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	201.940585321525	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	5030	False	NA	-5	True	AATAAA	-16	NA	42614869	42583720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595604_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
transcript_131296.known	chr22	-	3491	9	FSM	ENSG00000100227.19	ENST00000451060.6	3491	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	203.528215181581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGAGTTATCTTTTTT	4937	False	NA	-6	True	AATAAA	-15	NA	42614962	42583721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602108_42602769_42603161_42614798
transcript_1313.nic	chr1	+	3326	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-34	0	intron_retention	FALSE	canonical	3	37	junction_3	131.065672570341	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	-46	True	NA	13	True	TATAAA	-15	NA	1615844	1630603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623430_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_131301.known	chr22	-	3323	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	159.290262587209	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	0	True	NA	-5	True	AATAAA	-16	NA	42614931	42583720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
transcript_131309.known	chr22	-	2916	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	0	0	0	multi-exon	FALSE	canonical	3	1493	junction_8	98.6585019144321	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAAGATAGGTGGCTG	-22	True	NA	-6	True	AATAAA	-15	NA	42649392	42617839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
transcript_13131.nnic	chr1	+	1244	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	11.0855260988773	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATACATCCCTGGTGTA	NA	False	NA	NA	False	AATAAA	-24	NA	150641682	150650026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150649045
transcript_131317.nnic	chr22	-	2397	3	NNC	ENSG00000128274.17	novel	2092	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	462	False	NA	-21	True	AATAAA	-15	NA	42720800	42692121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_42693998_42695490_42695632_42720420
transcript_131318.known	chr22	-	2092	3	FSM	ENSG00000128274.17	ENST00000642412.2	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	8.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGCCTTGTGATTGGT	0	True	NA	-20	True	AATAAA	-16	NA	42720870	42692120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42693998_42695490_42695632_42720796
transcript_131319.known	chr22	-	1956	3	FSM	ENSG00000128274.17	ENST00000381278.4	1956	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	14	True	NA	-21	True	AATAAA	-15	NA	42720819	42692121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42693998_42695574_42695632_42720796
transcript_131320.nnic	chr22	-	2512	3	NNC	ENSG00000128274.17	novel	2092	3	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCGGGCCTTGTGATT	347	False	NA	-23	True	AATAAA	-13	NA	42720915	42692123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_42693998_42695112_42695632_42720796
transcript_131321.known	chr22	-	546	3	FSM	ENSG00000128274.17	ENST00000483026.2	546	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGATCTGGGGATACCA	4	True	NA	NA	False	NA	NA	NA	42720829	42693970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42693998_42695145_42695632_42720796
transcript_131322.nic	chr22	-	3630	2	NIC	ENSG00000128274.17	novel	2092	3	NA	NA	-45	0	intron_retention	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGCCTTGTGATTGGT	347	False	NA	-20	True	AATAAA	-16	NA	42720915	42692120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42695632_42720796
transcript_131323.known	chr22	-	2019	2	FSM	ENSG00000128274.17	ENST00000249005.3	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	NA	False	NA	-21	True	AATAAA	-15	NA	42695633	42692121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42693998_42695490
transcript_131327.known	chr22	-	3251	11	FSM	ENSG00000100266.19	ENST00000263246.8	3251	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	38.270615359568	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-20	True	NA	-18	True	AATAAA	-17	NA	43015149	42869772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
transcript_131329.nnic	chr22	-	3141	10	NIC	ENSG00000100266.19	novel	3251	11	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	137.585887878117	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-5	True	NA	-18	True	AATAAA	-17	NA	43015176	42869772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_43015020
transcript_131338.known	chr22	-	2728	16	FSM	ENSG00000242247.11	ENST00000263245.10	2728	16	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	22.4908870434227	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-26	True	NA	3	True	AATAAA	-41	NA	42857273	42796501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_131348.known	chr22	-	1736	11	FSM	ENSG00000100271.17	ENST00000266254.12	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.63379468330107	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCTTCAAGCATGTA	5	True	NA	NA	False	ATTAAA	-22	NA	43089391	43039515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43089276
transcript_131353.known	chr22	+	951	5	FSM	ENSG00000100290.3	ENST00000216115.3	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.31790237980706	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCTCTGGGG	1	True	NA	15	True	AATAAA	-17	NA	43110749	43129712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43110804_43124015_43124184_43127696_43127796_43128495_43128626_43129212
transcript_131358.known	chr22	-	2057	4	FSM	ENSG00000100294.13	ENST00000290429.11	2057	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	23.9304547943968	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTGGGTGGTTGTTCA	-26	True	NA	NA	False	NA	NA	NA	43143398	43132208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43133487_43137080_43137299_43141161_43141250_43142925
transcript_131362.known	chr22	-	1134	3	FSM	ENSG00000100294.13	ENST00000327555.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	33.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTACATGACCCAGTC	8	True	NA	-16	True	CATAAA	-19	NA	43143364	43132879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43133487_43141161_43141250_43142925
transcript_131365.nnic	chr22	-	1148	3	NNC	ENSG00000100294.13	novel	1134	3	NA	NA	-30	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	59.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTTCTTTACATGAC	NA	False	NA	-22	True	CATAAA	-13	NA	43143428	43132885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_43133443_43141161_43141250_43142925
transcript_131367.known	chr22	-	549	2	FSM	ENSG00000100294.13	ENST00000464244.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATGGACAGGGGTGACA	92	False	NA	NA	False	NA	NA	NA	43143280	43141055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43141250_43142925
transcript_13137.known	chr1	-	1629	8	FSM	ENSG00000143387.14	ENST00000271651.8	1629	8	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_5	6.19743198956682	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-1	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
transcript_131373.known	chr22	+	836	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	44.0933353492591	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCCTTTTTGCTTGGG	3	True	NA	25	True	AATAAA	-18	NA	43151558	43163242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
transcript_131374.known	chr22	+	1075	4	FSM	ENSG00000100300.18	ENST00000396265.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	149.675946260209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	46	False	NA	24	True	AATAAA	-17	NA	43151934	43163241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43152221_43159209_43159421_43161051_43161191_43162802
transcript_131376.known	chr22	+	636	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	153.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	-9	True	NA	24	True	AATAAA	-17	NA	43151546	43163241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43151605_43161051_43161191_43162802
transcript_13140.known	chr1	-	4710	22	FSM	ENSG00000143437.21	ENST00000358595.10	4710	22	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_18	48.7404621752936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCAAGTCTGGACCTGG	-11	True	NA	-13	True	ATTAAA	-17	NA	150876599	150809712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_131415.known	chr22	-	3386	14	FSM	ENSG00000100304.13	ENST00000216129.7	3386	14	0	0	0	0	multi-exon	FALSE	canonical	3	1387	junction_3	99.2367917075233	4172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCCTCCTTTCTCTT	-24	True	NA	-1	True	AATAAA	-16	NA	43187134	43166621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43168160_43168773_43168913_43169499_43169569_43171818_43171901_43172402_43172555_43173714_43173827_43174208_43174404_43174498_43174616_43176319_43176397_43179618_43179753_43179840_43180001_43180741_43180941_43182979_43183150_43186892
transcript_13147.known	chr1	-	2427	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_17	49.9530779832434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTCTGTAAACAGAA	127	False	NA	-49	True	AAAAAG	-2	NA	150876609	150811960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_131533.known	chr22	-	2561	8	FSM	ENSG00000130540.14	ENST00000422525.1	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	6.77630927178938	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCGTCGAGCGTTTCTG	1	True	NA	-5	True	AATAAA	-14	NA	43862470	43824509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43826114_43827513_43827641_43829059_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
transcript_131536.known	chr22	-	2539	9	FSM	ENSG00000100341.13	ENST00000216177.9	2540	9	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	5.93585503529188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	43892013	43879678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889539_43889798_43889865_43891061_43891295_43891687
transcript_131540.nnic	chr22	-	2291	8	NIC	ENSG00000100341.13	novel	2540	9	NA	NA	-28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	7.06529315364471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	43892041	43879678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43889798_43889865_43891687
transcript_131544.known	chr22	-	2197	7	FSM	ENSG00000100341.13	ENST00000381198.7	2000	7	0	-197	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	6.59334681495083	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	43892013	43879678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43891687
transcript_131555.known	chr22	-	2000	7	NNC	ENSG00000100341.13	novel	2000	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	4.91313432432789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAATAATAAAAACT	NA	False	NA	NA	False	ACTAAA	-44	NA	43892013	43879875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887648_43889324_43889496_43891687
transcript_131562.known	chr22	+	5394	13	FSM	ENSG00000188677.15	ENST00000338758.12	5394	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	7.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTCCACCGTCTTT	10	True	NA	14	True	AATAAA	-14	NA	44024301	44172939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44024452_44093927_44094018_44100052_44100124_44119037_44119141_44131486_44131628_44132893_44133010_44136459_44136519_44140123_44140144_44147860_44147923_44151482_44151552_44157981_44158084_44163857_44163931_44168601
transcript_131581.known	chr22	+	2753	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	13.7289611770155	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAAGACAGCTGGG	14	True	NA	NA	False	AATAAA	-18	NA	43923804	43947582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_131599.nic	chr22	+	2123	4	ISM	ENSG00000100344.11	ENST00000216180.8	2753	9	-50	13225	-37	1270	5prime_fragment	FALSE	canonical	3	50	junction_1	6.84754619472471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTCTGGCCTGCTGGGG	7844	False	NA	NA	False	AGTAAA	-12	NA	43923754	43934357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877
transcript_131602.known	chr22	+	1692	15	FSM	ENSG00000100347.15	ENST00000350028.5	1692	15	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_8	440.442895138009	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	4	True	NA	26	True	AATAAA	-17	NA	43955441	43996529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43955599_43963285_43963397_43964451_43964554_43968730_43968819_43972235_43972343_43972870_43973002_43973235_43973324_43976054_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
transcript_131604.known	chr22	-	5419	2	FSM	ENSG00000188636.4	ENST00000341255.4	5419	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTACAGCTGTTTCT	-14	True	NA	-17	True	ATTAAA	-23	NA	44498233	44492582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_44497812_44498043
transcript_131605.known	chr22	+	2013	15	FSM	ENSG00000248405.10	ENST00000361473.9	2013	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.22376203244	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	7	True	NA	3	True	NA	NA	NA	44702232	44862671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_131606.nnic	chr22	+	1564	12	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	6	-113	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	94.789109113925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	-9	True	NA	3	True	NA	NA	NA	44752563	44862671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859679_44859835_44862274
transcript_131611.known	chr22	+	905	9	FSM	ENSG00000186654.21	ENST00000432186.5	905	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	49.9199358973947	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCGCAGGCACTCTGTG	75	False	NA	NA	False	NA	NA	NA	44668712	44736909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44668806_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_131612.known	chr22	+	1767	9	FSM	ENSG00000186654.21	ENST00000006251.11	1767	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	58.1313168610518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGTCTGCAGTGCCTG	3	True	NA	8	True	AATAAA	-14	NA	44677056	44737680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44677241_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_131613.known	chr22	+	881	9	FSM	ENSG00000186654.21	ENST00000457960.5	881	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	51.6496611799148	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCCCGCTCGGGGGAC	-8	True	NA	NA	False	NA	NA	NA	44702217	44736786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702410_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_131623.known	chr22	+	1726	8	FSM	ENSG00000186654.21	ENST00000617066.4	1726	8	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	59.9897950505257	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCTGCAGTGCCTGC	NA	False	NA	9	True	AATAAA	-15	NA	44668546	44737681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44668806_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_131625.known	chr22	+	920	8	FSM	ENSG00000186654.21	ENST00000492475.5	920	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	62.5113867178433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGAGGCGGAGGGCGCGG	0	True	NA	NA	False	NA	NA	NA	44676980	44736874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44677241_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_131629.known	chr22	+	1612	8	FSM	ENSG00000186654.21	ENST00000431834.5	1612	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	56.2004430224386	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGGCATCTGAGTCGG	-7	True	NA	17	True	NA	NA	NA	44702218	44737441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731734_44731822_44732250_44732392_44735026_44735163_44736771
transcript_131635.known	chr22	+	1430	7	FSM	ENSG00000186654.21	ENST00000432916.5	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	68.4561903701922	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACCTGTCAACCTGGC	260	False	NA	-10	True	NA	NA	NA	44702485	44737662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731734_44731822_44732250_44732392_44736771
transcript_131638.known	chr22	+	1041	7	FSM	ENSG00000186654.21	ENST00000477331.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	63.8644397663259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTCTGGGGGCCGGCAG	294	False	NA	NA	False	GGGGCT	-19	NA	44702519	44737215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_13164.known	chr1	+	4370	22	FSM	ENSG00000143379.13	ENST00000368969.8	4370	22	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_21	19.1176095053037	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTCTCTCTCTCAG	20	True	NA	22	True	GATAAA	-13	NA	150926411	150964744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964249
transcript_131652.known	chr22	+	1725	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	119.482100007584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	-15	True	NA	116	True	NA	NA	NA	44752557	44862784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_131663.known	chr22	+	1615	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	30.5935768119512	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	2	True	NA	116	True	NA	NA	NA	44752574	44862784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_131666.known	chr22	+	1487	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	94.8082802291024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGGATGGATGTTTT	30	False	NA	120	True	NA	NA	NA	44752602	44862788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
transcript_131670.known	chr22	+	2905	10	FSM	ENSG00000241484.10	ENST00000460809.5	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	27.1843273656162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1	True	NA	NA	False	NA	NA	NA	44752573	44850963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931
transcript_131684.known	chr22	-	3540	13	FSM	ENSG00000056487.16	ENST00000396103.7	3540	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	28.3117564901148	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGGTTTTGGTGTCC	988	False	NA	-4	True	ATTAAA	-20	NA	45008993	44881161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_44883305_44885425_44885530_44885862_44885939_44887962_44888122_44889759_44889783_44891305_44891361_44893456_44893534_44896031_44896084_44913821_44913963_44916279_44916631_44920397_44920491_45008544_45008611_45008793
transcript_131686.known	chr22	-	3491	13	FSM	ENSG00000056487.16	ENST00000629843.2	3491	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	25.2052684087188	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGTGGTTTTGGTG	332	False	NA	-7	True	ATTAAA	-17	NA	45009649	44881164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_44883305_44885425_44885530_44885862_44885939_44887962_44888122_44889759_44889783_44891305_44891361_44893456_44893534_44896031_44896084_44913821_44913963_44916279_44916631_44920397_44920491_45008544_45008611_45009495
transcript_13169.nic	chr1	-	2269	11	NIC	ENSG00000143418.20	novel	2323	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	91	junction_10	178.326666542051	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	2691	False	NA	-19	True	AATAAA	-19	NA	150974480	150965185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974317
transcript_131690.known	chr22	-	575	2	FSM	ENSG00000056487.16	ENST00000491522.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGTTCCGTGGCAAA	369	False	NA	NA	False	NA	NA	NA	45009612	45008152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_45008611_45009495
transcript_131698.known	chr22	+	5151	8	FSM	ENSG00000093000.19	ENST00000347635.9	5151	8	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	64.4309470578814	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTCTTATGTTCCT	-7	True	NA	NA	False	AATAAA	-23	NA	45163924	45188017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
transcript_13170.known	chr1	-	2323	11	FSM	ENSG00000143418.20	ENST00000368954.10	2323	11	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_10	84.0509369370741	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	2	True	NA	-19	True	AATAAA	-19	NA	150974835	150965185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
transcript_131717.nnic	chr22	-	2492	11	NNC	ENSG00000100364.19	novel	6338	10	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	156.377108299137	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTTGCTATGTTTTTT	NA	False	NA	-11	True	AATAAA	-15	NA	45240938	45196037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45240639_45240764_45240859
transcript_131718.known	chr22	-	2723	10	FSM	ENSG00000100364.19	ENST00000251993.11	2723	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	163.683977360169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCAGTTTGCCCAC	1043	False	NA	-9	True	ATTAAA	-20	NA	45212488	45195827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45212264
transcript_131719.known	chr22	-	6338	10	FSM	ENSG00000100364.19	ENST00000336156.10	6338	10	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_3	21.8276073916599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTCTAATCTTTTTCT	0	True	NA	-11	True	ATTAAA	-16	NA	45240894	45192243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45240639
transcript_131726.known	chr22	-	2639	9	FSM	ENSG00000100364.19	ENST00000488038.5	2639	9	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_3	20.6968445662618	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTTGCTATGTTTTTT	7	True	NA	-11	True	AATAAA	-15	NA	45212457	45196037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955
transcript_131729.known	chr22	+	627	4	FSM	ENSG00000100373.10	ENST00000396082.2	627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTCCAACTGCAGGA	39	False	NA	NA	False	NA	NA	NA	45284990	45295822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45285066_45285940_45286097_45293180_45293314_45295559
transcript_131735.known	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.4342018240014	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	-19	True	NA	13	True	AATAAA	-14	NA	45309933	45341955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_13174.known	chr1	-	2544	11	FSM	ENSG00000143418.20	ENST00000271688.10	2544	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	200.546278948277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTAATATTTTCTTTT	2168	False	NA	-6	True	AATAAA	-32	NA	150975003	150965172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969132_150974618
transcript_131745.nnic	chr22	+	2742	8	NIC	ENSG00000100376.12	novel	2883	9	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	40.808662545782	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	751	False	NA	13	True	AATAAA	-14	NA	45309852	45341955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_45310184_45322370_45322427_45323174_45323428_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_131747.nnic	chr22	+	2628	7	NIC	ENSG00000100376.12	novel	2883	9	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	50.0754985552371	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	736	False	NA	13	True	AATAAA	-14	NA	45309837	45341955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_45310184_45322370_45322427_45323174_45323428_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_131750.nnic	chr22	+	1266	5	NNC	ENSG00000100376.12	novel	1612	5	NA	NA	-72	563	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	56.817140899556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGAGACTGGGTAATAT	760	False	NA	NA	False	AAAAAG	-4	NA	45309861	45328804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328004_45328331
transcript_131753.known	chr22	+	1490	7	FSM	ENSG00000128408.9	ENST00000614167.2	1490	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	5.15320827791344	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTATTTCTGTGAGG	-21	True	NA	104	True	AAAACA	-14	NA	45413692	45432509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289_45422409_45425947_45426176_45430899_45431067_45432283
transcript_131758.known	chr22	+	2904	17	FSM	ENSG00000077942.19	ENST00000327858.11	2904	17	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_15	373.825739608377	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGCATGAGAGTCT	0	True	NA	26	True	AATAAA	-21	NA	45502882	45601135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45574510_45574654_45576976_45577109_45600306
transcript_13176.nic	chr1	-	2196	11	NIC	ENSG00000143418.20	novel	2323	11	NA	NA	-3	-73	intron_retention	FALSE	canonical	3	91	junction_10	178.326666542051	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	2691	False	NA	-92	True	AATAAA	-16	NA	150974480	150965258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974317
transcript_131761.known	chr22	+	2355	16	FSM	ENSG00000077942.19	ENST00000402984.7	2355	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	387.307801797657	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTGAGCCTCGCGTG	0	True	NA	27	True	AATAAA	-17	NA	45502882	45563352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45503065_45518681_45518788_45523090_45523205_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45562911
transcript_131763.known	chr22	+	2251	15	FSM	ENSG00000077942.19	ENST00000262722.11	2251	15	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_7	140.06968018141	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCGTGCCTTGGTTTT	0	True	NA	37	True	AATAAA	-27	NA	45502882	45563362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45562911
transcript_131775.known	chr22	+	3294	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_4	72.1914351276183	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGTAATGGTTATGT	-25	True	NA	NA	False	AATAAA	-26	NA	45671833	45845307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_131786.known	chr22	+	3135	11	FSM	ENSG00000130638.17	ENST00000381061.8	3135	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	298.399664879168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGGGGTAATGGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	45671797	45845304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45672180_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_131794.known	chr22	+	1207	2	FSM	ENSG00000273145.1	ENST00000608290.1	1207	2	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTCTTTTTGT	2635	False	NA	17	True	CATAAA	-19	NA	46013605	46015498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46013811_46014496
transcript_13180.nnic	chr1	-	2497	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-479	-73	intron_retention	FALSE	canonical	3	16	junction_10	199.966622214809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	1689	False	NA	-92	True	AATAAA	-16	NA	150975482	150965258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975018
transcript_131801.known	chr22	+	572	4	FSM	ENSG00000186951.17	ENST00000420804.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCACCATCAACTACTTAT	-1	True	NA	NA	False	NA	NA	NA	46150605	46215364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46150653_46151887_46151971_46198341_46198592_46215172
transcript_131804.known	chr22	-	1600	5	FSM	ENSG00000205643.11	ENST00000381037.4	1600	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.4935340021939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	-12	True	NA	-20	True	AATAAA	-14	NA	46250289	46244020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46246672_46246796_46247109_46247222_46248171_46248285_46250255
transcript_131806.nnic	chr22	-	2356	4	NNC	ENSG00000205643.11	novel	1489	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	54.1356321350981	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-16	True	NA	-12	True	AATAAA	-22	NA	46250293	46244012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_46245239_46247109_46247222_46248171_46248285_46249388
transcript_131807.nnic	chr22	-	2370	4	NNC	ENSG00000205643.11	novel	1489	4	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	55.5037536268194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	NA	False	NA	-12	True	AATAAA	-22	NA	46250349	46244012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_46245239_46247109_46247222_46248171_46248285_46249430
transcript_131808.known	chr22	-	1489	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	19.4821855949366	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-16	True	NA	-12	True	AATAAA	-22	NA	46250293	46244012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
transcript_131812.known	chr22	-	498	3	FSM	ENSG00000205643.11	ENST00000474256.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	48	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGGGTAGTCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	46250311	46244908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46247109_46247222_46250255
transcript_131814.known	chr22	-	655	2	FSM	ENSG00000205643.11	ENST00000475605.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGGATAGAATTTTTA	-17	True	NA	-103	True	NA	NA	NA	46250294	46244622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46250255
transcript_131816.known	chr22	+	2566	14	FSM	ENSG00000075234.17	ENST00000381031.8	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_7	16.8687940593793	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	-12	True	NA	18	True	ATTAAA	-23	NA	46268007	46294008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292790
transcript_131819.known	chr22	+	2983	12	FSM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	66.7319790265012	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	-31	True	NA	22	True	AATAAA	-19	NA	46296869	46330810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_131827.nnic	chr22	+	2603	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	13	-309	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	69.2997113991105	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTTAGTAGAAGTTTT	-18	True	NA	NA	False	AAAAAG	-4	NA	46296882	46330501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46296932_46297379_46297480_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_131828.nnic	chr22	+	2880	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	69.2997113991105	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	14	True	NA	22	True	AATAAA	-19	NA	46296914	46330810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46296932_46297379_46297480_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_131830.nic	chr22	+	2899	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	54	180	intron_retention	FALSE	canonical	0	0	junction_1	62.4195482200889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTAGTGC	23	True	NA	NA	False	AATATA	-34	NA	46296923	46330332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_131831.nic	chr22	+	3068	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	54	-309	intron_retention	FALSE	canonical	0	0	junction_1	62.4195482200889	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTTAGTAGAAGTTTT	23	True	NA	NA	False	AAAAAG	-4	NA	46296923	46330501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_131832.nic	chr22	+	3377	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	54	0	intron_retention	FALSE	canonical	0	0	junction_1	62.4195482200889	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	23	True	NA	22	True	AATAAA	-19	NA	46296923	46330810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_131859.nic	chr22	+	634	4	ISM	ENSG00000075218.19	ENST00000454366.2	2983	12	-96	22174	-96	-18680	5prime_fragment	FALSE	canonical	0	0	junction_2	82.4957911384305	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAAGAAAAGCCCCA	6959	False	NA	NA	False	AATAAA	-19	NA	46296773	46308636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318
transcript_131862.nic	chr22	+	932	3	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	54	-18680	intron_retention	FALSE	canonical	0	0	junction_1	100	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAAGAAAAGCCCCA	23	True	NA	NA	False	AATAAA	-19	NA	46296923	46308636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318
transcript_131871.known	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	95.9126686105647	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	-17	True	NA	21	True	AATAAA	-17	NA	46335713	46357340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_131873.known	chr22	+	1882	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	111.882259541001	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_131874.nic	chr22	+	1585	11	NIC	ENSG00000100416.15	novel	1651	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_4	110.799323102626	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	-12	True	NA	19	True	AATAAA	-15	NA	46335718	46357338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_131879.known	chr22	+	1258	11	FSM	ENSG00000100416.15	ENST00000644006.1	1258	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	144.648850669475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGGCCTGAGTCCCTT	167	False	NA	NA	False	NA	NA	NA	46335950	46356979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46336107_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_131881.known	chr22	+	1381	10	FSM	ENSG00000100416.15	ENST00000381019.3	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	140.699838110939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCTCTGGCTGCTGG	14	True	NA	NA	False	NA	NA	NA	46335744	46357184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_131889.known	chr22	+	1830	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	98.9314515144978	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_13189.nnic	chr1	-	1716	9	NNC	ENSG00000143418.20	novel	2544	11	NA	NA	-1	-73	intron_retention	FALSE	non_canonical	0	0	junction_8	227.722933353231	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	-7	True	NA	-92	True	AATAAA	-16	NA	150974844	150965258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968134_150974801
transcript_131891.known	chr22	+	1775	10	FSM	ENSG00000100416.15	ENST00000453630.5	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	116.711208428495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_131892.known	chr22	+	1793	10	FSM	ENSG00000100416.15	ENST00000441818.5	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	115.519866283565	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	23	False	NA	16	True	AATAAA	-12	NA	46335400	46357335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_13190.nnic	chr1	+	1793	15	NNC	ENSG00000143412.10	novel	1551	14	NA	NA	-832	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	3.43154632841838	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	0	True	NA	19	True	NA	NA	NA	150981416	150995634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_150981668_150982300_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_13191.known	chr1	+	1551	14	FSM	ENSG00000143412.10	ENST00000368947.9	1551	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.52673642656851	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	-8	True	NA	19	True	NA	NA	NA	150982291	150995634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_131918.nic	chr22	+	1883	9	NIC	ENSG00000100416.15	novel	1775	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	115	junction_3	123.756565482402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	-12	True	NA	19	True	AATAAA	-15	NA	46335718	46357338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46356073_46356841
transcript_131919.nic	chr22	+	3058	9	NIC	ENSG00000100416.15	novel	1775	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	115	junction_3	123.412924768843	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	-12	True	NA	19	True	AATAAA	-15	NA	46335718	46357338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46355589_46355989_46356073_46356841
transcript_131940.nic	chr22	+	2668	8	ISM	ENSG00000100416.15	ENST00000453630.5	1775	10	277	0	-12	0	intron_retention	FALSE	canonical	3	115	junction_3	131.322783512183	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	-29	True	NA	18	True	AATAAA	-14	NA	46335701	46357337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443
transcript_13195.known	chr1	-	2400	10	FSM	ENSG00000143409.17	ENST00000312210.9	2400	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	5.76922443810985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTCCTGAGATCTGT	1515	False	NA	NA	False	NA	NA	NA	151006857	150996548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002324_151006311
transcript_13196.known	chr1	-	2623	10	FSM	ENSG00000143409.17	ENST00000683666.2	2542	10	0	-81	0	81	multi-exon	FALSE	canonical	1	4	junction_9	5.29150262212918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCAAAAAGGTGAAACCC	-19	True	NA	70	True	NA	NA	NA	151006902	150996753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002707_151006311
transcript_131962.known	chr22	+	591	2	FSM	ENSG00000100416.15	ENST00000493556.2	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCCCAGTTAGGA	311	False	NA	NA	False	NA	NA	NA	46335688	46338211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778
transcript_131963.known	chr22	+	1476	2	FSM	ENSG00000100416.15	ENST00000476901.1	1476	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	NA	False	NA	10	True	AATAAA	-16	NA	46330874	46333699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46331733_46333081
transcript_131965.nic	chr22	+	4465	19	NIC	ENSG00000075240.17	novel	4315	18	NA	NA	17	0	combination_of_known_junctions	TRUE	canonical	3	66	junction_3	7.49258893099634	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGGGCTGTCTGCCTC	11	True	NA	19	True	AATAAA	-21	NA	46577145	46679785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46577291_46626750_46626962_46637839_46637961_46658186_46658308_46661380_46661443_46663039_46663173_46663837_46663864_46664025_46664118_46665614_46665707_46666824_46666874_46668095_46668168_46668688_46668733_46668798_46668909_46672842_46672998_46673669_46673815_46674656_46674751_46675467_46675553_46676599_46676669_46677146
transcript_131971.known	chr22	-	4442	13	FSM	ENSG00000100422.14	ENST00000216264.13	4442	13	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_12	25.3260680371475	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTTGCTTTCTTTCCT	-3	True	NA	-14	True	AATAAA	-15	NA	46738252	46684409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46687207_46689991_46690201_46691571_46691778_46693426_46693504_46695209_46695316_46699312_46699466_46701635_46701711_46707842_46707989_46711085_46711150_46712167_46712294_46720085_46720209_46720901_46721016_46738006
transcript_131980.nic	chr22	-	3122	8	ISM	ENSG00000100422.14	ENST00000216264.13	4442	13	-52	12880	-52	-7235	5prime_fragment	FALSE	canonical	3	210	junction_7	19.0177146205257	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGACCATGAGGTGTG	-55	True	NA	NA	False	AAAAAG	-21	NA	46738304	46697289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_46699466_46701635_46701711_46707842_46707989_46711085_46711150_46712167_46712294_46720085_46720209_46720901_46721016_46738006
transcript_131984.known	chr22	-	434	2	FSM	ENSG00000100422.14	ENST00000460254.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGCAAAACACACTTAGACAA	159	False	NA	NA	False	NA	NA	NA	46738090	46735158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46735509_46738006
transcript_131985.known	chr22	-	670	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTAAAATTATTTTT	NA	False	NA	-24	True	AATAAA	-32	NA	46762563	46761893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46761900_46762600
transcript_131992.known	chr22	+	3758	13	FSM	ENSG00000054611.14	ENST00000337137.9	3758	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	17.5045628972055	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGGCCTTGGCCTGTGA	2	True	NA	14	True	AATAAA	-14	NA	46762649	47175693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_132.known	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_14	3299.83510418987	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_132000.known	chr22	+	2048	12	FSM	ENSG00000054611.14	ENST00000394449.6	2048	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	44.5397027826516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGAGACGTTGCGCTGAC	4	False	NA	30	True	AATAAA	-17	NA	46762682	47174087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_132001.known	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.6375671009769	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	24	True	NA	26	True	AATAAA	-13	NA	46762671	47174083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_132006.nic	chr22	+	1990	11	ISM	ENSG00000054611.14	ENST00000337137.9	3758	13	-67	138038	-34	-136428	5prime_fragment	TRUE	canonical	3	105	junction_1	19.0934543757802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATACTCCTGGCATGCT	NA	False	NA	NA	False	AATAAA	-16	NA	46762582	47037655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070
transcript_132013.known	chr22	+	1886	11	FSM	ENSG00000054611.14	ENST00000355704.7	1886	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.507912499064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGAGACGTTGCGCTGA	2	False	NA	29	True	AATAAA	-16	NA	46762680	47174086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46762849_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_132024.known	chr22	-	593	2	FSM	ENSG00000287225.1	ENST00000669310.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATTGATGGATGAAGA	3260	False	NA	NA	False	AAGAAA	-36	NA	48489180	48475488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_48475965_48489063
transcript_132025.known	chr22	+	2524	4	FSM	ENSG00000219438.9	ENST00000402357.6	2524	4	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	37.6651917115348	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTTTTGTTCCCTGG	-1	True	NA	18	True	AATAAA	-19	NA	48489552	48751932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_48489705_48646596_48646747_48707716_48707845_48749838
transcript_132029.known	chr22	+	6893	2	FSM	ENSG00000100426.7	ENST00000216268.6	6893	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTTATGTTTGTAAT	9	True	NA	26	True	AATAAA	-23	NA	49853843	49890080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49853990_49883333
transcript_132036.known	chr22	+	1577	11	FSM	ENSG00000184164.15	ENST00000404488.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	218.400457874978	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGGTTTGTCTCAT	-10	True	NA	34	True	AATAAA	-31	NA	49918634	49927540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922296_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_132043.known	chr22	+	1428	10	FSM	ENSG00000184164.15	ENST00000328268.9	1428	10	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	70.4919223110784	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGGGCGTGGGTTTGTCT	-11	True	NA	31	True	AATAAA	-28	NA	49918633	49927537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_132047.nic	chr22	-	2253	10	NIC	ENSG00000182858.14	novel	5330	10	NA	NA	-32	434	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	43.9775475823519	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTACAGAAAATAATGAGA	-32	True	NA	NA	False	AATAAA	-21	NA	49918470	49903215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_49904067_49904178_49904255_49904336_49904385_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_132050.known	chr22	-	5330	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	13.3259238671688	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCTTTCCTAGACGG	0	True	NA	NA	False	GATAAA	-14	NA	49918438	49900228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_132057.known	chr22	+	1994	9	FSM	ENSG00000184164.15	ENST00000483652.5	1994	9	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	74.7675564666922	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAACTGAGGGGTTAGC	-12	True	NA	NA	False	AATAAA	-45	NA	49918732	49926505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416
transcript_132058.known	chr22	+	1230	9	FSM	ENSG00000184164.15	ENST00000407217.7	1230	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	182.588634298524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAACGGGCGTGGGTTTG	-12	True	NA	28	True	AATAAA	-25	NA	49918732	49927534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49925416_49925558_49927254
transcript_132060.known	chr22	+	1242	9	FSM	ENSG00000184164.15	ENST00000403427.3	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	196.898728728755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAACGGGCGTGGGTTTG	-12	True	NA	28	True	AATAAA	-25	NA	49918732	49927534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49924359_49924456_49925416_49925558_49927254
transcript_132072.nic	chr22	-	2487	9	NIC	ENSG00000182858.14	novel	5330	10	NA	NA	-32	434	intron_retention	FALSE	canonical	3	131	junction_2	14.0356688476182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTACAGAAAATAATGAGA	-32	True	NA	NA	False	AATAAA	-21	NA	49918470	49903215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_13208.known	chr1	+	3025	8	FSM	ENSG00000143363.17	ENST00000271620.8	3025	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	45.1930101151196	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-3	True	NA	13	True	ATTAAA	-16	NA	151008448	151035713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_132081.known	chr22	+	855	7	FSM	ENSG00000184164.15	ENST00000482956.5	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	21.9222109590555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACTTCCATACATCCTG	25	False	NA	NA	False	NA	NA	NA	49918769	49923400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233
transcript_132085.nnic	chr22	+	2109	7	NNC	ENSG00000198355.5	novel	2102	6	NA	NA	-45	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	118.043306554087	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGATAATCCTGTATTT	240	False	NA	18	True	ATTAAA	-14	NA	49960722	49964070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_49961033_49961124_49961235_49961317_49961369_49961441_49961812_49962688_49962866_49962939_49963667_49963706
transcript_13209.nic	chr1	+	2991	8	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	61.9664161840418	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-7	True	NA	13	True	ATTAAA	-16	NA	151008392	151035713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_132090.known	chr22	+	2102	6	FSM	ENSG00000198355.5	ENST00000360612.5	2102	6	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	18.1725067065609	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATCCTGTATTTAT	-2	True	NA	20	True	ATTAAA	-16	NA	49960771	49964072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49961033_49961124_49961235_49961317_49961369_49961441_49961812_49962688_49962866_49962939
transcript_132102.known	chr22	+	3052	3	FSM	ENSG00000073150.14	ENST00000395842.3	3052	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTCCGCCGGGGACT	-15	True	NA	27	True	AATAAA	-18	NA	50170730	50180295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50170957_50176938_50178403_50178933
transcript_132113.known	chr22	+	2305	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	64.9229362730999	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	-5	True	NA	16	True	AATAAA	-16	NA	50185912	50199595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_13212.nic	chr1	+	2920	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_6	68.4657254073566	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	-7	True	NA	11	True	ATTAAA	-14	NA	151008392	151035711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_132122.known	chr22	+	2329	10	FSM	ENSG00000170638.10	ENST00000303434.8	2329	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	96.8627640619882	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTGACGTGTGAAC	-1	True	NA	19	True	AATAAA	-19	NA	50185916	50199598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_132130.known	chr22	+	2172	10	FSM	ENSG00000170638.10	ENST00000395827.5	2172	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	123.251724751912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGCCGACTCGGT	15	False	NA	NA	False	NA	NA	NA	50190597	50199475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50190649_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_132135.nic	chr22	+	2427	9	NIC	ENSG00000170638.10	novel	2305	10	NA	NA	-43	0	intron_retention	TRUE	canonical	3	208	junction_1	66.578431192091	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	50185869	50199595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
transcript_132139.known	chr22	+	2404	9	FSM	ENSG00000170638.10	ENST00000463233.1	2404	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	101.907356824716	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	0	True	NA	16	True	AATAAA	-16	NA	50185917	50199595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
transcript_13215.known	chr1	+	2788	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	57.564456626174	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	31	True	NA	13	True	ATTAAA	-16	NA	151008482	151035713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_132165.known	chr22	-	1001	2	FSM	ENSG00000273253.2	ENST00000608025.2	1001	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTTAAGACATTAAAAAA	NA	False	NA	-33	True	ATTAAA	-16	NA	50200837	50199089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50199329_50200075
transcript_132169.known	chr22	+	2283	9	FSM	ENSG00000073169.15	ENST00000380903.7	2283	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	21.391806258472	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTGTGGTCATTG	-11	True	NA	17	True	AATAAA	-17	NA	50201010	50217616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50201591_50206316_50206521_50208535_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
transcript_132178.known	chr22	-	2567	20	FSM	ENSG00000100429.18	ENST00000216271.10	2567	20	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_19	18.900966573065	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-24	True	NA	-5	True	AGTAAA	-17	NA	50251265	50245182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50250973
transcript_132179.nic	chr22	-	2585	20	NIC	ENSG00000100429.18	novel	2567	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_19	19.2253007353761	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-3	True	NA	-5	True	AGTAAA	-17	NA	50251411	50245182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50251101
transcript_13218.known	chr1	+	732	6	FSM	ENSG00000143363.17	ENST00000462440.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	83.9418846583754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAAGTACCCACCCTA	-2	True	NA	NA	False	NA	NA	NA	151008449	151033855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151027232_151027328_151028785_151028945_151033805
transcript_13219.nic	chr1	+	2717	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	81.541645801394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	-7	True	NA	11	True	ATTAAA	-14	NA	151008392	151035711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_132191.known	chr22	-	2153	19	FSM	ENSG00000100429.18	ENST00000498366.5	2153	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_12	27.7079121382635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCGGACCCCAAGCCCAC	11	True	NA	NA	False	NA	NA	NA	50251366	50245441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248860_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250770_50250906_50251101
transcript_132195.known	chr22	-	2607	19	FSM	ENSG00000100429.18	ENST00000626012.2	2607	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_17	23.1996168550738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGGCTCTGCCTCCT	3	True	NA	-8	True	AGTAAA	-14	NA	50251405	50245185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250770_50250906_50250973
transcript_132196.nic	chr22	-	2488	19	NIC	ENSG00000100429.18	novel	2567	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	23.4621444506299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-3	True	NA	-5	True	AGTAAA	-17	NA	50251411	50245182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250770_50250906_50251101
transcript_132201.known	chr22	-	1950	19	FSM	ENSG00000100429.18	ENST00000349505.4	1950	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	24.6857408734098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGGCCAAGGTGGGAGCA	376	False	NA	NA	False	NA	NA	NA	50251032	50245506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50250973
transcript_13221.nic	chr1	+	2693	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	72.7829650399048	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-7	True	NA	13	True	ATTAAA	-16	NA	151008392	151035713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_132217.known	chr22	-	2133	18	FSM	ENSG00000100429.18	ENST00000448072.5	2133	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	25.4648139087024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCGGACCCCAAGCCCAC	1	True	NA	NA	False	NA	NA	NA	50251240	50245441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50250973
transcript_132219.known	chr22	-	2375	18	FSM	ENSG00000100429.18	ENST00000415993.5	2375	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	33.1856474583793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-20	True	NA	-5	True	AGTAAA	-17	NA	50251261	50245182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249720_50249859_50249965_50250062_50250161_50250770_50250906_50250973
transcript_13223.known	chr1	+	825	6	FSM	ENSG00000143363.17	ENST00000450884.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	68.575797479869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGAAGCTGACCCCTG	25	True	NA	NA	False	NA	NA	NA	151008476	151033837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_13226.known	chr1	+	845	5	FSM	ENSG00000143363.17	ENST00000431193.5	845	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	95.0960041221502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGATGAGTGCCCTC	30	True	NA	NA	False	NA	NA	NA	151008481	151034113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151033805
transcript_132262.nnic	chr22	-	1691	13	NNC	ENSG00000188130.14	novel	1778	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	65.0044336094769	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	-14	True	NA	-5	True	AATAGA	-17	NA	50261747	50252902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384_50261484_50261632
transcript_132268.known	chr22	-	1785	12	FSM	ENSG00000188130.14	ENST00000488504.5	1785	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	56.7355763153483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	8953	False	NA	-5	True	AATAGA	-17	NA	50261545	50252902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384
transcript_132269.known	chr22	-	1778	12	FSM	ENSG00000188130.14	ENST00000215659.13	1778	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_7	24.4884860784252	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTGCGTCCTCAT	0	True	NA	-3	True	AATAGA	-19	NA	50261683	50252900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384
transcript_13227.nic	chr1	+	2534	5	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	76.9654955158479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-7	True	NA	13	True	ATTAAA	-16	NA	151008392	151035713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151027232_151027328_151028785_151028945_151033805
transcript_132294.known	chr22	-	2418	12	FSM	ENSG00000185386.15	ENST00000330651.11	2418	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.385694607919935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTGTATCCAAAGGC	7	True	NA	0	True	AATAAA	-16	NA	50270380	50263712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50265028_50265320_50265495_50265581_50265661_50266225_50266306_50266539_50266612_50266933_50267049_50267126_50267175_50267256_50267287_50267370_50267483_50267568_50267628_50267819_50267950_50270176
transcript_13230.known	chr1	+	2238	4	FSM	ENSG00000143363.17	ENST00000368935.1	2238	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	97.8570385818005	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	4	True	NA	13	True	ATTAAA	-16	NA	151008529	151035713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151027232_151027328_151033805
transcript_132300.known	chr22	-	2409	12	FSM	ENSG00000185386.15	ENST00000417877.1	2409	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.385694607919935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAATAAAGGGGGTTCT	-6	True	NA	-26	True	NA	NA	NA	50270393	50263738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50265028_50265320_50265495_50265581_50265661_50266225_50266306_50266539_50266612_50266933_50267049_50267126_50267175_50267252_50267287_50267370_50267483_50267568_50267628_50267819_50267950_50270176
transcript_132302.nnic	chr22	-	6426	37	NNC	ENSG00000196576.16	novel	6409	37	NA	NA	1075	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_36	46.7438762741795	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTGGCTGAGTGTTCCT	7238	False	NA	-4	True	AATACA	-18	NA	50300387	50274978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50294718_50294779_50300276
transcript_132303.known	chr22	-	6383	37	FSM	ENSG00000196576.16	ENST00000449103.5	6383	37	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_35	56.6340592458872	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTGGCTGAGTGTTCCT	-2	True	NA	-4	True	AATACA	-18	NA	50307627	50274978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50294725_50294779_50307552
transcript_132307.known	chr22	-	4891	20	FSM	ENSG00000205593.12	ENST00000413817.8	4891	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	3.26655171561745	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTTTTCCTTTTTTG	-36	True	NA	1	True	ATTAAA	-20	NA	50327012	50309029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50312262_50312342_50312418_50312522_50312626_50312998_50313109_50313445_50313500_50313634_50313725_50313813_50313879_50314206_50314273_50314399_50314495_50314604_50314701_50314798_50314922_50315713_50315770_50316024_50316088_50316173_50316254_50316369_50316476_50317292_50317374_50317907_50318021_50318846_50318890_50318964_50319004_50326811
transcript_13231.known	chr1	+	2247	10	FSM	ENSG00000163141.20	ENST00000368931.8	2247	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.58676593929396	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCCCCTTCCCCGCGG	-22	True	NA	NA	False	NA	NA	NA	151036585	151047720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151036767_151037566_151037663_151038503_151038569_151038795_151039027_151042955_151043139_151043331_151043435_151043595_151043728_151045796_151045884_151046066_151046166_151046650
transcript_13232.known	chr1	-	1174	6	FSM	ENSG00000197622.13	ENST00000492796.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	24.7353997339845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAAGCTGGCTTT	-14	True	NA	NA	False	NA	NA	NA	151059615	151052945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
transcript_132328.known	chr22	+	4094	24	FSM	ENSG00000100239.16	ENST00000612753.5	4094	24	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_15	28.6734433161908	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	2	True	NA	20	True	AATAAA	-21	NA	50343326	50445090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50436987_50437069_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
transcript_13233.known	chr1	-	3006	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	7.66077672302228	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCACAGTAATCATTG	-21	True	NA	-16	True	AATAAA	-14	NA	151059622	151050984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
transcript_132337.known	chr22	+	3293	23	FSM	ENSG00000100239.16	ENST00000395744.7	3293	23	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	41.3158565202272	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCAGTTGAAACCAGTT	6	True	NA	21	True	AATAAA	-16	NA	50343330	50444374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
transcript_132340.nnic	chr22	+	3103	23	NNC	ENSG00000100239.16	novel	4094	24	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	53.924514886878	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCAGTTGAAACCAGTT	-12	True	NA	21	True	AATAAA	-16	NA	50343312	50444374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_50343551_50372019_50372151_50406734_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50436987_50437069_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
transcript_132351.nnic	chr22	+	2270	10	NIC	ENSG00000100239.16	novel	4094	24	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.14488533489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	-4	True	NA	20	True	AATAAA	-21	NA	50343320	50445090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_50343551_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
transcript_132354.known	chr22	+	4035	23	FSM	ENSG00000100239.16	ENST00000359139.7	4035	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_22	70.2824878556071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	-21	True	NA	20	True	AATAAA	-21	NA	50343303	50445090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439697_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444202
transcript_132355.known	chr22	+	2199	17	FSM	ENSG00000100239.16	ENST00000401672.7	2199	17	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_8	31.426252958315	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGACGGCCCAGCTTGC	NA	False	NA	37	True	AATAAA	-32	NA	50419441	50444390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50436987_50437069_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
transcript_132356.known	chr22	-	8019	41	FSM	ENSG00000100241.22	ENST00000380817.8	8019	41	0	0	0	0	multi-exon	TRUE	canonical	3	271	junction_13	48.4166229202327	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTCTGGACCCTTCTA	1	True	NA	NA	False	ATTAAA	-19	NA	50475035	50444999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50457033_50457112_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467691_50467785_50467924_50468375_50468462_50474785
transcript_132358.known	chr22	-	6045	40	FSM	ENSG00000100241.22	ENST00000689129.1	8669	40	129	2495	-9	0	multi-exon	FALSE	canonical	3	13	junction_12	81.8101424536348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTGTGCCTGCCTTCC	9428	False	NA	-9	True	TATAAA	-17	NA	50474942	50446805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467694_50467785_50467924_50468375_50468462_50474785
transcript_13236.known	chr1	-	2379	4	FSM	ENSG00000197622.13	ENST00000483763.5	2379	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8.65383665716478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGATATTTTTCTC	27	True	NA	NA	False	NA	NA	NA	151059574	151052113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055994_151059478
transcript_132366.known	chr22	+	4276	2	FSM	ENSG00000128165.9	ENST00000395738.2	4276	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCAGAATCATCTTTTC	17	True	NA	NA	False	AATAAA	-23	NA	50481555	50486440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50481958_50482566
transcript_132370.known	chr22	-	2593	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	0	0	0	multi-exon	FALSE	canonical	1	89	junction_12	63.929509997502	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-4	True	NA	-23	True	AATAAA	-20	NA	50507702	50502948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_132375.nic	chr22	-	2741	13	NIC	ENSG00000100258.18	novel	2593	14	NA	NA	-43	0	intron_retention	FALSE	canonical	1	89	junction_11	65.0040062867923	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCCTGGTGCTGCT	NA	False	NA	-25	True	AATAAA	-18	NA	50507745	50502950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50503700_50503807_50503905_50504339_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_132377.nnic	chr22	-	2635	12	NIC	ENSG00000100258.18	novel	2593	14	NA	NA	-43	0	intron_retention	FALSE	canonical	1	3	junction_5	101.84463941962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCCTGGTGCTGCT	NA	False	NA	-25	True	AATAAA	-18	NA	50507745	50502950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50503700_50503807_50503905_50504339_50504728_50504801_50504985_50505056_50505154_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_13238.known	chr1	+	2085	2	FSM	ENSG00000143443.10	ENST00000368926.6	2085	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCAGTCACTGTTCTG	19	True	NA	NA	False	AATACA	-38	NA	151047750	151051420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151048853_151050437
transcript_132380.known	chr22	-	2658	14	FSM	ENSG00000100258.18	ENST00000216080.5	2658	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	92.3542831138191	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCCTGGTGCTGCT	14	False	NA	-25	True	AATAAA	-18	NA	50507684	50502950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507121_50507581
transcript_132386.known	chr22	+	1996	20	FSM	ENSG00000025770.19	ENST00000299821.15	1996	20	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_15	57.8271854710342	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	20	True	NA	24	True	AATAAA	-18	NA	50508259	50523472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
transcript_132393.known	chr22	+	2077	19	FSM	ENSG00000025770.19	ENST00000395701.7	2077	19	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	18.9743979556079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	4	True	NA	24	True	AATAAA	-18	NA	50508243	50523472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016
transcript_13240.known	chr1	+	8807	9	FSM	ENSG00000143458.12	ENST00000368918.8	8807	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.04633819296811	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCAGGGTGTCATTGA	0	True	NA	20	True	AATAAA	-30	NA	151070760	151125542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151070935_151088189_151088298_151090405_151090574_151093191_151093387_151097851_151098003_151103561_151103676_151107036_151107223_151117391_151117517_151117956
transcript_132438.known	chr22	-	1586	10	FSM	ENSG00000025708.14	ENST00000252029.8	1586	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	9.38214748114869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCAGTGCTTGGGCGG	0	True	NA	2	True	AATAAA	-18	NA	50530012	50525751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50525919_50526000_50526142_50526245_50526477_50526575_50526739_50527164_50527284_50527587_50527718_50528511_50528611_50529135_50529339_50529495_50529720_50529903
transcript_132440.known	chr22	+	1388	9	FSM	ENSG00000025770.19	ENST00000395698.7	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	16.7032930884901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACAGAGGAAATGTTA	3	True	NA	10	True	ATTAAA	-16	NA	50508242	50519752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189
transcript_132441.known	chr22	-	1751	9	FSM	ENSG00000025708.14	ENST00000487577.5	1751	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.65336728815391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCAGTGCTTGGG	9699	False	NA	-1	True	AATAAA	-15	NA	50529996	50525754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50525919_50526000_50526142_50526245_50526477_50526575_50526739_50527164_50527284_50527587_50527718_50528511_50528611_50529135_50529339_50529495
transcript_132444.known	chr22	-	869	6	FSM	ENSG00000177989.14	ENST00000401779.5	869	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.58693797647189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTGCGCGTCCT	-8	True	NA	10	True	NA	NA	NA	50532184	50530408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50530561_50530711_50530853_50530936_50531059_50531190_50531296_50531569_50531703_50531968
transcript_132447.known	chr22	-	643	5	FSM	ENSG00000177989.14	ENST00000403326.5	643	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.93700393700591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTCCGCCTCTCTCTCT	9719	False	NA	-7	True	NA	NA	NA	50532108	50530425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50530561_50530711_50530853_50530936_50531059_50531190_50531296_50531968
transcript_132451.known	chr22	-	664	2	FSM	ENSG00000284194.3	ENST00000638598.2	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCGGGACGACGTTGAAG	12	True	NA	NA	False	NA	NA	NA	50526145	50523905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50526000
transcript_132452.known	chr22	-	753	2	FSM	ENSG00000177989.14	ENST00000463472.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGGGATCCGGCACTCG	9810	False	NA	NA	False	NA	NA	NA	50531423	50530538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50531059_50531190
transcript_132453.known	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-12	True	NA	-5	True	ATTAAA	-15	NA	50525598	50523567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50525471
transcript_132454.known	chr22	-	1068	2	FSM	ENSG00000284194.3	ENST00000543927.6	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATCTGTGTGTGTGTGT	-14	True	NA	-10	True	ATTAAA	-10	NA	50526461	50523572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50526245
transcript_132455.known	chr22	-	992	2	FSM	ENSG00000284194.3	ENST00000252785.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCATCATTAAACGGGCT	-18	True	NA	-33	True	NA	NA	NA	50525604	50523595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50525441
transcript_132456.known	chr22	-	462	3	FSM	ENSG00000217442.4	ENST00000406915.4	462	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGGACCTCTTCTCTC	2	True	NA	-3	True	AATAAA	-17	NA	50562919	50551111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50551403_50556296_50556406_50562857
transcript_13248.known	chr1	-	3873	19	FSM	ENSG00000143434.17	ENST00000368914.8	3873	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	14.8815280311939	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAGTTCCACATCAGAA	-6	True	NA	-18	True	AATAAA	-22	NA	151146631	151131706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151133518_151134400_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151146432
transcript_132480.nic	chr22	-	1447	11	NIC	ENSG00000100288.20	novel	1474	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	114.305249223297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-26	True	NA	-12	True	AATAAA	-18	NA	50582850	50578962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50579256_50579425_50579508_50579726_50579803_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_132484.known	chr22	-	1474	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_10	85.1920770964061	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-25	True	NA	-12	True	AATAAA	-18	NA	50582849	50578962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_132490.known	chr22	-	1856	10	FSM	ENSG00000100288.20	ENST00000481673.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_9	77.7059986244448	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-21	True	NA	-12	True	AATAAA	-18	NA	50582845	50578962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50582358_50582557
transcript_132494.nic	chr22	-	1550	10	NIC	ENSG00000100288.20	novel	1474	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	163	junction_9	89.2243669314666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-15	True	NA	-12	True	AATAAA	-18	NA	50582839	50578962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_132497.nic	chr22	-	1946	9	NIC	ENSG00000100288.20	novel	1474	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	163	junction_8	82.2359410476952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-25	True	NA	-12	True	AATAAA	-18	NA	50582849	50578962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580417_50580564_50580661_50581419_50581554_50581748_50582358_50582557
transcript_132501.known	chr22	+	759	4	FSM	ENSG00000205559.5	ENST00000648558.1	759	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.65383665716478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATGGAGACAAGCTGG	22	False	NA	NA	False	NA	NA	NA	50583155	50587640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50583324_50586529_50586640_50586842_50586953_50587269
transcript_132502.known	chr22	+	2380	4	FSM	ENSG00000205559.5	ENST00000652967.1	2380	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.28653526310404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTAAACTCCATCTCAA	1420	False	NA	NA	False	NA	NA	NA	50584553	50588027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50585956_50586529_50586640_50586842_50586953_50587269
transcript_132506.known	chr22	+	940	2	FSM	ENSG00000205559.5	ENST00000656328.1	940	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGACTCAGTCTCAAAA	-14	True	NA	NA	False	NA	NA	NA	50583119	50584333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50583324_50583597
transcript_132509.known	chr22	-	2069	9	FSM	ENSG00000100288.20	ENST00000492582.5	2069	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_8	54.7298764387423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCTGCTGAGCAG	-30	True	NA	-8	True	AATAAA	-22	NA	50582854	50578958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748
transcript_132510.known	chr22	-	2114	8	FSM	ENSG00000100288.20	ENST00000479003.5	2114	8	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_7	58.4605221757489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGTCCTGGCCCTGC	4	True	NA	-15	True	AATAAA	-15	NA	50582820	50578965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580417_50580564_50580661_50581419_50581554_50581748
transcript_132511.known	chr22	-	1895	9	FSM	ENSG00000100299.18	ENST00000356098.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	14.9410299176462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCCAATCCTGGGGTAA	-35	True	NA	-18	True	NA	NA	NA	50628170	50625017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627945
transcript_132512.known	chr22	-	4294	8	FSM	ENSG00000100299.18	ENST00000216124.10	4294	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	14.5377762665241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGTGAGGGTTCTGTT	-17	True	NA	-1	True	AATAAA	-19	NA	50628152	50622753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555
transcript_132514.nic	chr22	-	2355	10	NIC	ENSG00000079974.19	novel	2536	11	NA	NA	-16	0	intron_retention	FALSE	canonical	2	8	junction_9	75.0305287660535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	NA	False	NA	-32	True	AGTAAA	-17	NA	50783683	50767505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
transcript_132515.nnic	chr22	-	2516	10	NIC	ENSG00000079974.19	novel	2401	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	7	junction_9	69.0042045596758	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	12	False	NA	-32	True	AGTAAA	-17	NA	50783641	50767505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783390
transcript_132516.known	chr22	-	2401	10	FSM	ENSG00000079974.19	ENST00000395595.8	2401	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	62.8507933300943	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-9	True	NA	-32	True	AGTAAA	-17	NA	50783636	50767505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783500
transcript_132520.known	chr22	-	2169	9	FSM	ENSG00000079974.19	ENST00000395598.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	58.4335894413479	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-6	True	NA	-32	True	AGTAAA	-17	NA	50783659	50767505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
transcript_132521.nic	chr22	-	2633	9	ISM	ENSG00000079974.19	ENST00000395595.8	2401	10	-18	0	5	0	intron_retention	FALSE	canonical	3	46	junction_8	54.0647759636531	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-1	True	NA	-32	True	AGTAAA	-17	NA	50783654	50767505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038
transcript_132528.known	chr22	+	1009	3	FSM	ENSG00000184319.17	ENST00000462238.6	1131	3	17	105	2	0	multi-exon	FALSE	canonical	3	162	junction_1	27	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	NA	False	NA	NA	False	AAGAAA	-20	NA	50783756	50799434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50783865_50785172_50785294_50798654
transcript_132533.known	chr22	+	1080	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	105	99	-25	7	multi-exon	FALSE	canonical	3	80	junction_1	68	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGTGAATATTTATT	42	False	NA	NA	False	AAGAAA	-27	NA	50783849	50799441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50784022_50785172_50785294_50798654
transcript_132539.known	chr22	+	2987	3	FSM	ENSG00000184319.17	ENST00000480246.2	3083	3	96	0	-13	0	multi-exon	FALSE	canonical	3	16	junction_1	100	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGACTCAGGTATTT	54	False	NA	NA	False	ATTAAA	-20	NA	50783861	50801309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50784073_50785172_50785294_50798654
transcript_132540.known	chr22	-	2341	10	FSM	ENSG00000079974.19	ENST00000395593.7	2341	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	86.9878663313964	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	11	True	NA	-32	True	AGTAAA	-17	NA	50783642	50767505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769424_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
transcript_132541.known	chr22	-	2049	8	FSM	ENSG00000079974.19	ENST00000436958.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.0559855737021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATTACA	-11	True	NA	-56	True	NA	NA	NA	50783638	50767529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769424_50769553_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_132544.known	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	103.93387320792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	NA	False	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
transcript_132560.known	chr3	-	2223	12	FSM	ENSG00000113851.16	ENST00000639284.1	2223	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	110.298767816409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTCATAACCATTAAAGT	NA	False	NA	NA	False	NA	NA	NA	3179727	3144627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3145500_3150882_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_132561.known	chr3	+	2252	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	40.4646482142381	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	-13	True	NA	6	True	AATAAA	-15	NA	3126939	3149023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_132572.known	chr3	+	1113	7	FSM	ENSG00000072756.17	ENST00000651093.1	1113	7	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_5	130.212219941994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	10	True	NA	NA	False	AAGAAA	-43	NA	3126962	3148101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
transcript_132576.nic	chr3	+	1540	5	ISM	ENSG00000072756.17	ENST00000651093.1	1113	7	-64	2578	-34	-2578	5prime_fragment	FALSE	canonical	3	275	junction_1	40.751533713469	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATCTTGGATAAACTTG	NA	False	NA	NA	False	NA	NA	NA	3126898	3145523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583
transcript_132578.nic	chr3	+	2522	5	NIC	ENSG00000072756.17	novel	1113	7	NA	NA	-3	-2578	intron_retention	FALSE	canonical	3	42	junction_1	140.058023690183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATCTTGGATAAACTTG	-8	True	NA	NA	False	NA	NA	NA	3126944	3145523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_3128019_3129013_3129189_3137259_3137454_3140509_3140649_3144583
transcript_132579.known	chr3	-	878	5	FSM	ENSG00000113851.16	ENST00000450014.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	63.4113554499508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTATCCTTGTTATT	21	False	NA	-8	True	AATAAA	-13	NA	3179674	3167429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_132580.known	chr3	-	1012	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	141.088624630053	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTGTGACATTTAGA	-6	True	NA	-19	True	AATAAA	-25	NA	3179701	3172175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_132585.known	chr3	+	987	3	FSM	ENSG00000072756.17	ENST00000339437.11	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	-13	True	NA	NA	False	AATAAA	-13	NA	3126939	3130679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3126991_3129013_3129189_3129918
transcript_132589.known	chr3	+	1935	3	FSM	ENSG00000072756.17	ENST00000402675.5	1935	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3	True	NA	NA	False	AATAAA	-13	NA	3127019	3130679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3128019_3129013_3129189_3129918
transcript_132596.known	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	120.336359867551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	21	False	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_132599.known	chr3	-	2147	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	20.1117969112658	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCGTCATCAGCTTCT	-10	True	NA	-13	True	AATAAA	-19	NA	4467269	4361145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_132601.known	chr3	-	1447	8	FSM	ENSG00000144455.14	ENST00000383843.9	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	67.7546594526976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGGACAGCATGACCTC	-5	True	NA	NA	False	AATGAA	-1	NA	4467264	4361765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4452875_4453050_4466975
transcript_132602.known	chr3	-	1128	8	FSM	ENSG00000144455.14	ENST00000405420.2	1128	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	67.5392554031221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTCTGACCTACATTGG	-14	True	NA	NA	False	NA	NA	NA	4467273	4362108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_132604.known	chr3	-	1102	5	FSM	ENSG00000144455.14	ENST00000458465.6	1102	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	89.8693496137587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAAGTGCCCTCCCCTA	-10	True	NA	NA	False	NA	NA	NA	4467269	4361794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4452875_4453050_4466975
transcript_132609.nnic	chr3	+	3971	3	NNC	ENSG00000175928.6	novel	571	3	NA	NA	-25	-2219	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	32	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACACTTGCAATAATGT	0	True	NA	12	True	AATAAA	-21	NA	3799405	3847615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_3799920_3801041_3801247_3844363
transcript_132620.known	chr3	+	5960	2	FSM	ENSG00000175928.6	ENST00000319331.4	5960	2	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTTCTATTTATTCAA	-3	True	NA	27	True	NA	NA	NA	3799430	3849834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3799920_3844363
transcript_132625.known	chr3	+	1657	4	FSM	ENSG00000170364.13	ENST00000425863.5	1657	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.0410262117139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	3	True	NA	14	True	AATAAA	-16	NA	4303370	4317265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4303527_4312897_4313230_4313646_4313762_4316211
transcript_132627.known	chr3	+	2443	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-65	-302	-28	302	multi-exon	FALSE	canonical	3	49	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	NA	False	NA	NA	False	AATAAA	-45	NA	4303303	4317567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4303527_4312897_4313762_4316211
transcript_132629.known	chr3	+	3152	5	FSM	ENSG00000134107.5	ENST00000256495.4	3152	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.27760839478607	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAGTCAACCTGGCAGG	-25	True	NA	NA	False	NA	NA	NA	4979436	4985323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4979799_4979961_4980032_4980300_4980409_4981391_4981516_4982835
transcript_132633.known	chr3	+	6113	12	FSM	ENSG00000134109.11	ENST00000256497.9	6113	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	9.14980919278991	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCATCTTGTTTCTTTT	-4	True	NA	23	True	ATTAAA	-17	NA	5187706	5219958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_5188315_5195208_5195282_5199591_5199696_5201752_5201925_5202965_5203150_5205066_5205242_5207152_5207274_5208092_5208264_5210174_5210249_5211119_5211217_5213318_5213523_5215828
transcript_132635.known	chr3	+	2933	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	19.9833263830958	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	-24	True	NA	14	True	AATAAA	-16	NA	5122291	5180911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_132644.nic	chr3	+	1781	7	NIC	ENSG00000071282.12	novel	8284	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	41.8276888622304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTATCTAATTATTTAC	-4	True	NA	45	True	AATAAA	-22	NA	8501853	8568125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_8501981_8514924_8514996_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_132645.known	chr3	+	8284	6	FSM	ENSG00000071282.12	ENST00000157600.8	8284	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	7.52063827078527	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTCCAGAGGGTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	8501822	8574668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_132647.known	chr3	+	1431	5	FSM	ENSG00000071282.12	ENST00000426878.2	1431	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	36.4451642882838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGGCCGGACTCTTTCT	218	False	NA	NA	False	NA	NA	NA	8501806	8550449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8549873
transcript_132648.known	chr3	+	1059	5	FSM	ENSG00000071282.12	ENST00000456506.2	1059	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	38.9831694452875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGTGGTGGTAGATCC	3	True	NA	NA	False	AATATA	-31	NA	8501887	8567764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_8501981_8532736_8532826_8548567_8548904_8565431_8565648_8567439
transcript_132649.known	chr3	+	1113	5	FSM	ENSG00000071282.12	ENST00000454244.4	1113	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	38.2295697072306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACAGGATCCCACCGAG	0	True	NA	NA	False	NA	NA	NA	8501857	8567621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_8501981_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_132659.known	chr3	-	4387	4	FSM	ENSG00000180914.11	ENST00000316793.8	4387	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	4.32049379893857	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGCTTGATGGATGAAT	-3	True	NA	-4	True	AATAAA	-38	NA	8769613	8750380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8753225_8767265_8768330_8768495_8768592_8769230
transcript_132663.known	chr3	-	5857	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	22.2142346755908	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCTAGTAAGTGCCT	-15	True	NA	1	True	AATAAA	-14	NA	8963472	8877074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_132669.nic	chr3	-	1116	9	ISM	ENSG00000070950.10	ENST00000264926.7	5857	13	-31	35266	-1	-22232	5prime_fragment	FALSE	canonical	3	108	junction_1	23.4134042804544	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAGATGAAATCCACA	5761	False	NA	NA	False	NA	NA	NA	8963503	8912340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_132673.nic	chr3	-	581	5	ISM	ENSG00000070950.10	ENST00000413832.1	581	6	270	-188	-1	-57	3prime_fragment	FALSE	canonical	3	122	junction_1	19.6770805761424	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTCAGCCCTCAAAAA	5761	False	NA	NA	False	AATAAA	-2	NA	8963503	8941607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_132674.known	chr3	-	592	4	FSM	ENSG00000070950.10	ENST00000469793.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	7.34846922834953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCCTGCCCAAGCCC	14	True	NA	NA	False	NA	NA	NA	8963443	8946951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8947291_8948508_8948571_8958919_8959002_8963334
transcript_132675.known	chr3	-	8923	22	FSM	ENSG00000196220.17	ENST00000383836.8	8923	22	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_17	6.75150105087079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCCAGTGGTTTTTGA	-5	True	NA	3	True	AATAAA	-21	NA	9249646	8980590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8985933_8990511_8990840_8992905_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9032649_9032753_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
transcript_132678.known	chr3	-	8415	22	FSM	ENSG00000196220.17	ENST00000360413.7	8415	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	8.51116380391379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCCAGTGGTTTT	457	False	NA	0	True	AATAAA	-18	NA	9249213	8980593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8985933_8990511_8990840_8992905_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9028099_9028131_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
transcript_132686.nic	chr3	-	3579	20	ISM	ENSG00000196220.17	ENST00000383836.8	8923	22	-48	12037	-9	0	5prime_fragment	FALSE	canonical	2	7	junction_15	6.44731471513615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGCAAGTATTTTTCC	NA	False	NA	-15	True	TTTAAA	-27	NA	9249694	8992627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9032649_9032753_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
transcript_132689.known	chr3	-	2334	6	FSM	ENSG00000196220.17	ENST00000470951.5	2334	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	7.18331399842719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	679	False	NA	NA	False	NA	NA	NA	9248991	9058737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
transcript_132706.known	chr3	+	6931	23	FSM	ENSG00000168137.20	ENST00000402198.7	6931	23	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_21	112.695789225201	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGTCCAATTTTGTG	-11	True	NA	25	True	AATAAA	-33	NA	9397614	9478154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
transcript_132718.known	chr3	+	3754	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	98.1960749511021	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	-12	True	NA	20	True	AATAAA	-21	NA	9363053	9386791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_132722.known	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	69.1339726389241	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	-14	True	NA	20	True	AATAAA	-21	NA	9363051	9386791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_132727.nnic	chr3	+	2858	10	NNC	ENSG00000134077.16	novel	3961	10	NA	NA	-7	830	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	120.653569987039	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTAAGGTGTGTGTTT	-22	True	NA	7	True	ATTAAA	-20	NA	9363043	9385700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_9363313_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_132730.nic	chr3	+	3071	10	NIC	ENSG00000134077.16	novel	3961	10	NA	NA	-7	830	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	111.315367811956	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTAAGGTGTGTGTTT	-22	True	NA	7	True	ATTAAA	-20	NA	9363043	9385700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_9363526_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_132731.known	chr3	+	2390	10	FSM	ENSG00000134077.16	ENST00000515662.6	2390	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.267326898627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	32	False	NA	12	True	TTTAAA	-18	NA	9363097	9384870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9363729_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_132743.known	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	55.4182957154043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	1361	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
transcript_132749.nic	chr3	+	612	4	ISM	ENSG00000134077.16	ENST00000452837.7	3754	10	-42	15619	-39	73	5prime_fragment	FALSE	canonical	3	110	junction_1	132.75792506162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAATCAGAATTCAAGTA	NA	False	NA	-48	True	AAAAAG	-21	NA	9363011	9371172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059
transcript_132760.known	chr3	-	1809	3	FSM	ENSG00000206573.10	ENST00000520447.1	1809	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTATTGTATTAAATATT	-3	True	NA	-39	True	TATAAA	-28	NA	9397495	9388882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9390498_9391704_9391827_9397423
transcript_132763.known	chr3	-	670	3	FSM	ENSG00000206573.10	ENST00000518437.3	1968	3	0	1298	0	35	multi-exon	FALSE	canonical	1	6	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGAGTGAGACCTTGC	1285	False	NA	NA	False	NA	NA	NA	9397504	9391311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9391827_9395505_9395580_9397423
transcript_132764.known	chr3	-	1831	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	53	1161	1	0	multi-exon	FALSE	canonical	3	150	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	2	True	NA	-15	True	AATAAA	-15	NA	9397441	9390013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9391827_9397423
transcript_132767.known	chr3	-	1897	4	FSM	ENSG00000206573.10	ENST00000481221.7	1897	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	37.5854581808798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	1315	False	NA	-30	True	TATAAA	-37	NA	9397474	9388873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9390498_9391678_9391827_9395505_9395580_9397423
transcript_132772.known	chr3	-	4900	4	FSM	ENSG00000156959.9	ENST00000287585.8	4900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.0655588845805	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTGCCACTTCTCTG	-9	True	NA	-1	True	AATAAA	-21	NA	9553822	9498360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9502312_9505966_9506204_9552273_9552848_9553684
transcript_13278.known	chr1	+	1913	7	FSM	ENSG00000163156.12	ENST00000368905.9	1913	7	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	59.4885609919158	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTATCTCTGGCATC	37	True	NA	NA	False	AATAAA	-21	NA	151166143	151170296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_132789.known	chr3	+	2452	19	FSM	ENSG00000163719.20	ENST00000296003.9	2452	19	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_17	130.310514721236	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	16	True	NA	24	True	AATAAA	-24	NA	9649504	9702393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
transcript_132801.known	chr3	+	2368	18	FSM	ENSG00000163719.20	ENST00000353332.9	2368	18	0	0	0	0	multi-exon	TRUE	canonical	3	234	junction_17	110.94254880319	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	NA	False	NA	24	True	AATAAA	-24	NA	9649432	9702393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9701789
transcript_13281.known	chr1	+	869	7	FSM	ENSG00000163156.12	ENST00000368902.1	869	7	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_1	175.517963626392	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	-28	True	NA	15	True	AATAAA	-25	NA	151166078	151169138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151166253_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_132819.known	chr3	+	2105	17	FSM	ENSG00000163719.20	ENST00000351233.9	2105	17	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_16	125.464247272878	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTTGTGTCATCATT	23	True	NA	20	True	AATAAA	-20	NA	9649511	9702389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9701789
transcript_13286.known	chr1	+	1094	5	FSM	ENSG00000163156.12	ENST00000461862.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	61.3855642639212	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTAGCCTTTCCCAAAT	9347	False	NA	NA	False	ATTAAA	-18	NA	151166021	151167979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325
transcript_132863.known	chr3	+	4698	14	FSM	ENSG00000156983.17	ENST00000683743.1	4698	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	22.3715267047332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCAATTTAGAATTCTTT	-13	True	NA	14	True	AATAAA	-1	NA	9731747	9748001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
transcript_132865.known	chr3	+	4712	14	FSM	ENSG00000156983.17	ENST00000684333.1	4712	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	19.2839265318349	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTCTTGCCCCCTG	-16	True	NA	28	True	AATAAA	-15	NA	9731744	9748015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743580_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
transcript_132867.known	chr3	+	4743	14	FSM	ENSG00000156983.17	ENST00000383829.7	4743	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	25.5630095180771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTCTTGCCCCCTG	-26	True	NA	28	True	AATAAA	-15	NA	9731734	9748015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742172_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
transcript_132869.known	chr3	+	4604	14	FSM	ENSG00000156983.17	ENST00000424362.7	4604	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	23.0612767471166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAAACTGTCAATTTA	87	False	NA	5	True	AATATA	-11	NA	9731847	9747992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742172_9742943_9743254_9743580_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
transcript_132872.known	chr3	+	4666	13	FSM	ENSG00000156983.17	ENST00000683639.1	4666	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	23.250298683864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-7	True	NA	NA	False	NA	NA	NA	9731753	9747873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745931_9746299_9746455_9747165
transcript_132874.known	chr3	+	4304	13	FSM	ENSG00000156983.17	ENST00000433861.6	4304	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	29.2256546357629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-32	True	NA	NA	False	NA	NA	NA	9731728	9747873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
transcript_13288.known	chr1	-	1511	6	FSM	ENSG00000163159.15	ENST00000368892.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	2	620	junction_5	94.5926001334142	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTGTATTGACCTT	-29	True	NA	-1	True	TATAAA	-24	NA	151190197	151176303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_132885.known	chr3	-	1453	12	FSM	ENSG00000134072.11	ENST00000256460.8	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	4.23093682844367	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTAGCGCTGTCTCCCTC	-1	True	NA	NA	False	AATAAA	-16	NA	9769947	9757346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9757622_9757728_9757847_9759487_9759576_9759671_9759751_9760655_9760769_9761460_9761537_9761630_9761758_9762913_9763053_9763138_9763214_9765758_9765891_9767666_9767782_9769831
transcript_13289.known	chr1	-	913	6	FSM	ENSG00000163159.15	ENST00000496809.5	913	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	331.710114407143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCCTGGGCCCCGGCCC	23	True	NA	-106	True	NA	NA	NA	151190145	151176730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190123
transcript_132896.known	chr3	-	1617	9	FSM	ENSG00000171148.14	ENST00000440161.5	1617	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	123.273070863023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCGGCAGTCTCTAGA	NA	False	NA	NA	False	NA	NA	NA	9793011	9780255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792821
transcript_132906.known	chr3	-	1225	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	77.8488118085305	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-11	True	NA	-61	True	AATAAA	-14	NA	9844016	9837848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_132909.known	chr3	-	907	9	FSM	ENSG00000156990.14	ENST00000427174.5	907	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	218.874250427043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGCCCAGCTGCCC	19	True	NA	NA	False	NA	NA	NA	9843986	9838164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840336_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_132911.known	chr3	+	1948	8	FSM	ENSG00000114026.22	ENST00000449570.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	82.4670620704449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGCAGTTTAACAAAAT	13	False	NA	NA	False	AAAAAG	-41	NA	9750071	9766540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9759233_9759287_9765808
transcript_132915.known	chr3	+	903	8	FSM	ENSG00000250151.9	ENST00000424442.5	903	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	427.80149888585	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGGGGGCCAAGATGAT	-9	True	NA	NA	False	NA	NA	NA	9793081	9813351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9810620_9810710_9812942_9813112_9813247
transcript_13292.nic	chr1	-	2312	5	NIC	ENSG00000163159.15	novel	1347	6	NA	NA	9	-1	intron_retention	FALSE	canonical	2	620	junction_4	105.31975123404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTGGTGTCCAGTC	-20	True	NA	-16	True	AATAAA	-13	NA	151190188	151176462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_132924.nic	chr3	-	1114	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	208.731836555511	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTATGGTTTTGAGGA	9738	False	NA	-64	True	AATAAA	-11	NA	9844048	9837851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_132925.known	chr3	+	1630	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	41.424630354416	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	-23	True	NA	19	True	AATAAA	-23	NA	9749951	9757407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
transcript_132926.known	chr3	+	2220	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	61.9015795885336	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	-31	True	NA	93	True	NA	NA	NA	9749943	9766737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
transcript_132929.known	chr3	+	910	7	FSM	ENSG00000241553.13	ENST00000440787.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	401.760189665427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCTTCTGATGTTCAG	2	True	NA	-65	True	AAGAAA	-41	NA	9793092	9806417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803535_9803708_9803842_9804014_9806209
transcript_132936.known	chr3	-	955	7	FSM	ENSG00000156990.14	ENST00000418713.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_3	68.8573404462686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCACTCCAGTCTAGG	3	True	NA	NA	False	NA	NA	NA	9844002	9839940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_132937.known	chr3	+	1815	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	20.1454709550311	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	6	True	NA	-11	True	NA	NA	NA	9749980	9757377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
transcript_13294.known	chr1	-	1347	6	FSM	ENSG00000163159.15	ENST00000354473.4	1347	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	325.336379767157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	10	True	NA	-15	True	AATAAA	-14	NA	151190158	151176461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151177065_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_132940.known	chr3	+	1433	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	178.834672253453	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGCTGTGTGTGTGT	-9	True	NA	39	True	ATTAAA	-31	NA	9793081	9807101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_132942.known	chr3	+	942	6	FSM	ENSG00000241553.13	ENST00000498623.6	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	352.430078171543	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCGGGACAGATTTTTT	NA	False	NA	-40	True	NA	NA	NA	9792494	9806442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9792706_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_132945.known	chr3	+	926	6	FSM	ENSG00000241553.13	ENST00000433034.1	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	352.430078171543	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACGTTATTGGTTG	26	False	NA	90	True	TTTAAA	-33	NA	9793116	9806572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793182_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_132948.known	chr3	+	1950	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	79.6884558766199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	-31	True	NA	24	True	AATAAA	-33	NA	9749943	9766668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
transcript_132958.known	chr3	+	1069	4	FSM	ENSG00000114026.22	ENST00000383826.9	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	91.131163105103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGCTTACTAGCACTT	28	False	NA	NA	False	NA	NA	NA	9750086	9766112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9765808
transcript_13296.known	chr1	+	3800	16	FSM	ENSG00000143398.20	ENST00000368888.9	3800	16	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	172.998599865882	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-20	True	NA	36	True	AATAAA	-20	NA	151198551	151249531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224244_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_132961.known	chr3	-	1178	4	FSM	ENSG00000156990.14	ENST00000433972.1	1178	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_3	64.8296914144197	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGTGTGCAGTCATTT	9727	False	NA	-12	True	AATAGA	-15	NA	9844059	9841256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
transcript_132964.known	chr3	-	807	3	FSM	ENSG00000156990.14	ENST00000433555.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATGGCAGCTGCAATA	9810	False	NA	NA	False	NA	NA	NA	9843976	9841407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9842083_9842198_9842244_9843889
transcript_132965.known	chr3	-	1974	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	41.1855557204222	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAGTCTTTGAATGTC	-25	True	NA	-4	True	AATAAA	-27	NA	9792473	9779966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
transcript_132966.known	chr3	-	1192	6	FSM	ENSG00000187288.12	ENST00000675828.1	1192	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTTCTTTGCCTGTGT	0	True	NA	NA	False	AATAAA	-14	NA	9880253	9866713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9867297_9869881_9870070_9870163_9870323_9877065_9877220_9878433_9878512_9880223
transcript_132967.known	chr3	+	1637	2	FSM	ENSG00000171135.15	ENST00000647897.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	1	True	NA	6	True	ATTAAA	-25	NA	9890609	9894349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9890812_9892914
transcript_132968.known	chr3	+	1313	2	FSM	ENSG00000171135.15	ENST00000489724.2	1313	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGTGTTGCTTGAAA	0	True	NA	64	True	GGGGCT	-12	NA	9890573	9893883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9890812_9892808
transcript_132971.known	chr3	+	2679	16	FSM	ENSG00000163701.19	ENST00000383814.8	2679	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.928559218478941	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACACAGTGTGCTTCTC	6	True	NA	NA	False	AATAAA	-20	NA	9902847	9916397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9903065_9903396_9903413_9904031_9904152_9906363_9906462_9906705_9906866_9906960_9907101_9908238_9908308_9909216_9909284_9910864_9911041_9911126_9911175_9911254_9911301_9911442_9911598_9913955_9914025_9914547_9914600_9914678_9914778_9915250
transcript_132972.known	chr3	+	2541	14	FSM	ENSG00000163701.19	ENST00000434065.5	2541	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.97300851082104	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAACACAGTGTGCTTC	6	True	NA	NA	False	AATAAA	-18	NA	9902847	9916395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9903065_9906363_9906462_9906705_9906866_9906960_9907101_9908238_9908308_9909216_9909284_9910864_9911041_9911126_9911175_9911254_9911301_9911442_9911598_9913955_9914025_9914547_9914600_9914678_9914778_9915250
transcript_132985.known	chr3	+	2409	19	FSM	ENSG00000163702.20	ENST00000403601.8	2409	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	18.6940936074063	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCACACGCGTCTCC	-30	True	NA	8	True	AATAAA	-24	NA	9917097	9933621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
transcript_132990.known	chr3	+	2621	19	FSM	ENSG00000163702.20	ENST00000295981.7	2621	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	22.0904426012923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCCCACACGCGTCTC	-30	True	NA	7	True	AATAAA	-23	NA	9917097	9933620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917634_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
transcript_132998.known	chr3	+	2147	18	FSM	ENSG00000163702.20	ENST00000413608.2	2147	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	19.4224569483378	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGGCCCACACGCG	125	False	NA	3	True	AATAAA	-19	NA	9917315	9933616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932952
transcript_133004.known	chr3	+	2388	18	FSM	ENSG00000163702.20	ENST00000383812.9	2388	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	14.0019771218853	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCACACGCGTCTCC	1803	False	NA	8	True	AATAAA	-24	NA	9917073	9933621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
transcript_133023.known	chr3	+	2284	17	FSM	ENSG00000163702.20	ENST00000451271.5	2284	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26.0261286979066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTGGCCCACACGCGT	-3	True	NA	4	True	AATAAA	-20	NA	9917124	9933617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917421_9917712_9917735_9917926_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932952
transcript_133027.known	chr3	+	2467	17	FSM	ENSG00000163702.20	ENST00000483582.5	2467	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_16	13.1529464379659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCGTCTCCGTTTCAGTG	-30	True	NA	17	True	AATAAA	-33	NA	9917097	9933630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819
transcript_133028.nic	chr3	+	2355	17	NIC	ENSG00000163702.20	novel	2147	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_16	14.5267802265333	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGGCCCACACGCG	1792	False	NA	3	True	AATAAA	-19	NA	9917062	9933616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932952
transcript_133033.known	chr3	+	2244	17	FSM	ENSG00000163702.20	ENST00000455057.5	2244	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	19.0098658596004	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTGGCCCACACGCGT	35	True	NA	4	True	AATAAA	-20	NA	9917162	9933617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
transcript_133039.known	chr3	+	2547	17	FSM	ENSG00000163702.20	ENST00000466046.5	2547	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	13.7471587973661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGCAGACGCTGTTTT	-30	True	NA	-20	True	NA	NA	NA	9917097	9933593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
transcript_13304.known	chr1	+	3737	15	FSM	ENSG00000143398.20	ENST00000409426.5	3737	15	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	99.6848093968675	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	-20	True	NA	9	True	TATAAA	-20	NA	151198551	151249504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_13309.known	chr1	+	3613	14	FSM	ENSG00000143398.20	ENST00000368890.8	3613	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	142.618579335224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-19	True	NA	36	True	AATAAA	-20	NA	151198552	151249531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242437_151242568_151246919_151246966_151247862
transcript_133100.nic	chr3	+	1994	12	NIC	ENSG00000163703.20	novel	2078	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	39.7121876914338	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	NA	False	NA	22	True	AATAAA	-23	NA	9933787	9945032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_133103.known	chr3	+	1994	12	FSM	ENSG00000163703.20	ENST00000326434.9	1994	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	39.496835316263	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	14	True	NA	22	True	AATAAA	-23	NA	9933855	9945032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_133106.known	chr3	+	2093	11	FSM	ENSG00000163703.20	ENST00000674067.2	2093	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.348316355341	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	2	True	NA	0	True	AATAAA	-12	NA	9933843	9945385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938018_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_133109.known	chr3	+	2780	11	FSM	ENSG00000163703.20	ENST00000682642.1	2780	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	36.9724221548981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTAACATGAGAATTAAAT	-4	True	NA	-81	True	NA	NA	NA	9933837	9945304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943674
transcript_13311.known	chr1	+	2297	14	FSM	ENSG00000143398.20	ENST00000441902.6	2297	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	159.943481141819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTGAATTTTTTTCAG	-19	True	NA	NA	False	NA	NA	NA	151198552	151248149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_133110.known	chr3	+	2127	11	FSM	ENSG00000163703.20	ENST00000682570.1	2127	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	38.2956916636846	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	21	True	NA	0	True	AATAAA	-12	NA	9933862	9945385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943154_9943380_9943516_9944364
transcript_133112.known	chr3	+	2312	11	FSM	ENSG00000163703.20	ENST00000682783.1	2312	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.2981585921985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	15	True	NA	0	True	AATAAA	-12	NA	9933856	9945385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934081_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_133117.known	chr3	+	2595	10	FSM	ENSG00000163703.20	ENST00000683239.1	2595	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	35.3741902145241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATCTCAGGAAATAAAGAA	NA	False	NA	-17	True	NA	NA	NA	9933809	9944993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9944096_9944364
transcript_133123.known	chr3	+	2872	9	FSM	ENSG00000163703.20	ENST00000467713.6	2872	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	26.1817565300726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAGGCATCAGTCTTA	-8	True	NA	15	True	AATAAA	-16	NA	9933833	9945025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_133126.known	chr3	+	2740	8	FSM	ENSG00000163703.20	ENST00000684648.1	2740	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	45.2444607050388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCATCTCAGGAAATAAA	-3	True	NA	-20	True	NA	NA	NA	9933838	9944990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_13313.nnic	chr1	+	3513	13	NIC	ENSG00000143398.20	novel	3613	14	NA	NA	-28	0	combination_of_known_splicesites	TRUE	canonical	3	34	junction_11	141.711463505564	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	3087	False	NA	36	True	AATAAA	-20	NA	151198522	151249531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151246919_151246966_151247862
transcript_133130.known	chr3	+	3041	8	FSM	ENSG00000163703.20	ENST00000682200.1	3041	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	40.5276423681216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGAAAGTTAAAAGGCA	13	True	NA	6	True	AATAAA	-7	NA	9933854	9945016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380
transcript_133131.known	chr3	+	3144	6	FSM	ENSG00000163703.20	ENST00000682906.1	3144	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	48.318112545918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTGGAAAGTTAAAAGG	5	True	NA	4	True	AATAAA	-5	NA	9933846	9945014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_133132.known	chr3	+	3370	8	FSM	ENSG00000163703.20	ENST00000683888.1	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	12.7823219761529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAAGGCATCAGTCTT	-8	True	NA	14	True	AATAAA	-15	NA	9933833	9945024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_133136.known	chr3	-	3368	5	FSM	ENSG00000163704.12	ENST00000295984.7	3368	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	28.0568619057798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	15	True	NA	-34	True	AATAAA	-15	NA	9952374	9945541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9945712_9946084_9948002_9948757_9948914_9949100_9950173_9952321
transcript_133143.nnic	chr3	-	3951	4	NNC	ENSG00000163704.12	novel	3775	4	NA	NA	4	0	intron_retention	FALSE	canonical	3	28	junction_3	21.9696760710454	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-15	True	NA	-34	True	AATAAA	-15	NA	9952404	9945541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_9948002_9948757_9948914_9949100_9950173_9952141
transcript_133144.known	chr3	-	3775	4	FSM	ENSG00000163704.12	ENST00000412055.6	3775	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	6.0184900284226	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-19	True	NA	-34	True	AATAAA	-15	NA	9952408	9945541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9948002_9948757_9948914_9949100_9950173_9952321
transcript_133149.nnic	chr3	-	3671	4	NNC	ENSG00000163704.12	novel	3775	4	NA	NA	4	-280	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	21.9696760710454	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCCCAGGCCTCTCTA	-15	True	NA	NA	False	NA	NA	NA	9952404	9945821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_9948002_9948757_9948914_9949100_9950173_9952141
transcript_133152.nnic	chr3	-	3497	4	NNC	ENSG00000163704.12	novel	3775	4	NA	NA	4	-454	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	21.9696760710454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGTGGCACACGCC	-15	True	NA	NA	False	AATACA	-7	NA	9952404	9945995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_9948002_9948757_9948914_9949100_9950173_9952141
transcript_133155.known	chr3	-	1475	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGTCATTTGCC	-1	True	NA	3	True	AATAAA	-19	NA	9952390	9948579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9948914_9949100_9950173_9952321
transcript_133158.nic	chr3	-	1194	9	FSM	ENSG00000125037.13	ENST00000693754.1	1421	9	-12	239	-12	-2	multi-exon	FALSE	canonical	2	4	junction_8	175.099212947974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGCAGGCATGCAGCA	-28	True	NA	-19	True	AATAAA	-14	NA	9986855	9963968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9981633_9981748_9986506
transcript_133160.known	chr3	-	2777	8	FSM	ENSG00000125037.13	ENST00000245046.7	2353	8	-279	-145	-277	145	multi-exon	FALSE	canonical	3	378	junction_7	32.859006158347	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTTTTTATTATT	273	False	NA	NA	False	NA	NA	NA	9987120	9962536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
transcript_133162.known	chr3	-	1909	7	FSM	ENSG00000125037.13	ENST00000487465.5	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_6	34.4887260162248	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGCCTGATAAAGGA	-11	True	NA	NA	False	AAAAAG	-8	NA	9986838	9968643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
transcript_133166.known	chr3	+	2882	2	FSM	ENSG00000180385.9	ENST00000326237.3	2882	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	1	True	NA	NA	False	NA	NA	NA	9986910	10005244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9987265_10002716
transcript_133168.known	chr3	-	1794	3	FSM	ENSG00000186162.11	ENST00000432401.6	1813	3	18	1	9	0	multi-exon	FALSE	canonical	1	2	junction_1	30	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATCATATAGTCTTT	-19	True	NA	NA	False	ATTAAA	-17	NA	10026357	10014237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10015527_10023559_10023748_10026040
transcript_133170.known	chr3	-	1088	3	FSM	ENSG00000186162.11	ENST00000424691.2	1130	3	30	12	1	-7	multi-exon	FALSE	canonical	3	46	junction_1	8	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTATCTTTGCCTGTGT	26	False	10026391	-7	True	AATAAA	-11	NA	10026365	10017496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10018072_10023559_10023748_10026040
transcript_133171.known	chr3	-	1107	2	FSM	ENSG00000186162.11	ENST00000445082.1	1107	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATTGAATTCATTAA	12	True	NA	NA	False	AAAAAG	-12	NA	10026326	10022926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10023748_10026040
transcript_133172.known	chr3	+	5096	44	FSM	ENSG00000144554.13	ENST00000675286.1	5096	44	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_1	20.9290955763533	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTGCCTCATTTATC	-12	True	NA	22	True	AATAAA	-18	NA	10026436	10101932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_133173.known	chr3	+	5185	44	FSM	ENSG00000144554.13	ENST00000419585.5	5185	44	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	23.989812151705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	50	False	NA	20	True	AATAAA	-16	NA	10026498	10101930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_13318.known	chr1	+	1319	10	FSM	ENSG00000159352.16	ENST00000368884.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	2133	junction_4	226.530405666343	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGGTTTTGAGTGTG	-18	True	NA	38	True	AATAAA	-34	NA	151254733	151267479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_133183.nic	chr3	+	2722	27	ISM	ENSG00000144554.13	ENST00000287647.7	5219	43	-41	26696	3	0	5prime_fragment	FALSE	canonical	3	83	junction_1	14.4603620634449	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGGAAAAATAGGTA	180	False	NA	16	True	NA	NA	NA	10026372	10072964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870
transcript_133184.nic	chr3	+	2826	27	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-77	28966	5	0	5prime_fragment	FALSE	canonical	3	35	junction_1	20.1159729285935	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGGAAAAATAGGTA	-27	True	NA	16	True	NA	NA	NA	10026421	10072964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870
transcript_133197.nnic	chr3	+	944	4	NNC	ENSG00000254999.4	novel	1150	3	NA	NA	-2	-273	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	883.430560686892	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGACTGCTGTGATTAT	-7	True	NA	21	True	AATAAA	-14	NA	10115672	10126917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10115820_10118905_10118971_10125625_10125709_10126268
transcript_133199.known	chr3	+	1150	3	FSM	ENSG00000254999.4	ENST00000530758.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	8	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCTTACAGTCTTTT	-5	True	NA	20	True	AATAAA	-21	NA	10115674	10127190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10115820_10125625_10125709_10126268
transcript_13321.nnic	chr1	+	1247	9	NIC	ENSG00000159352.16	novel	1319	10	NA	NA	-63	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	815.163020505715	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTTGCTTCAAAT	NA	False	NA	19	True	AATAAA	-15	NA	151254645	151267460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151254809_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_133217.nnic	chr3	+	2146	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-43	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATAGGCAGGGTGTGTT	NA	False	NA	7	True	ATTAAA	-15	NA	10141734	10153662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150923_10153228
transcript_133219.nnic	chr3	+	2058	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-43	-94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGACGGTGAAGTTCCT	NA	False	NA	11	True	ATTAAA	-12	NA	10141734	10153573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_133220.nnic	chr3	+	2101	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-16	True	NA	12	True	ATTAAA	-20	NA	10141785	10153667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_133221.nnic	chr3	+	1895	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-43	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.8436242322398	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGGTGAAGTTCCTATT	NA	False	NA	14	True	ATTAAA	-15	NA	10141734	10153576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153400
transcript_133222.nnic	chr3	+	1986	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.8436242322398	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	NA	False	NA	12	True	ATTAAA	-20	NA	10141734	10153667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153400
transcript_133224.nnic	chr3	+	2158	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	NA	False	NA	12	True	ATTAAA	-20	NA	10141734	10153667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150945_10153243
transcript_133225.nnic	chr3	+	2037	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.8436242322398	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	NA	False	NA	12	True	ATTAAA	-20	NA	10141734	10153667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150945_10153364
transcript_133226.nnic	chr3	+	2035	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.8436242322398	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	NA	False	NA	12	True	ATTAAA	-20	NA	10141734	10153667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150950_10153371
transcript_133234.known	chr3	+	4414	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-24	True	NA	12	True	ATTAAA	-20	NA	10141777	10153667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10142188_10146513_10146637_10149786
transcript_133238.nnic	chr3	+	1841	3	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	NA	False	NA	12	True	ATTAAA	-20	NA	10141756	10153667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10149786_10150930_10153400
transcript_133242.known	chr3	+	958	3	FSM	ENSG00000134086.8	ENST00000477538.1	958	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATCACAAAATGTAATT	640	False	NA	NA	False	AAGAAA	-39	NA	10142545	10150145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10143022_10146513_10146637_10149786
transcript_133243.known	chr3	+	2696	2	FSM	ENSG00000134086.8	ENST00000345392.2	2696	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	-14	True	NA	NA	False	NA	NA	NA	10141787	10152082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10142188_10149786
transcript_133245.known	chr3	+	3431	13	FSM	ENSG00000134070.5	ENST00000256458.5	3431	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.09993386139236	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAACTTGTAATTAGTT	5	True	NA	NA	False	AATAAA	-20	NA	10164918	10243745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10165049_10177837_10178021_10200368_10200516_10209588_10209693_10213206_10213402_10213483_10213549_10216933_10217049_10219679_10219790_10222635_10222832_10226370_10226434_10234458_10234660_10238747_10239040_10242115
transcript_133261.known	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	407.26267799651	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6	True	NA	-22	True	AATAAA	-17	NA	10321082	10300930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
transcript_133264.known	chr3	-	1479	10	FSM	ENSG00000157020.18	ENST00000383801.6	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	412.827677558112	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAACTAAATAAAGTCATA	4	True	NA	-52	True	NA	NA	NA	10321084	10300960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319317_10321049
transcript_133277.nic	chr3	-	1868	9	NIC	ENSG00000157020.18	novel	1467	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	318.769117073784	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	8	True	NA	-22	True	AATAAA	-17	NA	10321080	10300930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
transcript_133281.known	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_8	118.632244246663	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-24	True	NA	-22	True	AATAAA	-17	NA	10321112	10300930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_133288.known	chr3	-	1603	9	FSM	ENSG00000157020.18	ENST00000397117.5	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	389.038478174075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	27	True	NA	-41	True	ACTAAA	-2	NA	10321061	10300949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
transcript_133289.nic	chr3	-	1127	9	NIC	ENSG00000157020.18	novel	1603	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	283.562575765915	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	6540	False	NA	-41	True	ACTAAA	-2	NA	10321126	10300949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_133290.known	chr3	+	5342	8	FSM	ENSG00000157014.11	ENST00000287652.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	13.3706959506258	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCAGTCTCTCCGTGTTT	NA	False	NA	23	True	AATAAA	-19	NA	10248022	10281216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279035_10279220
transcript_133292.known	chr3	+	4937	8	FSM	ENSG00000157014.11	ENST00000448281.7	4937	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	20.1423505508738	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCTCCGTGTTTGT	-31	True	NA	25	True	AATAAA	-21	NA	10248458	10281218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279064_10279220
transcript_133296.nic	chr3	+	3053	7	ISM	ENSG00000157014.11	ENST00000448281.7	4937	8	-12	2053	-12	0	5prime_fragment	FALSE	canonical	3	34	junction_1	14.3923204831219	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGAGTGACATGGT	-43	True	NA	27	True	TATAAA	-24	NA	10248446	10279165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884
transcript_133298.known	chr3	+	4249	14	FSM	ENSG00000132164.10	ENST00000254488.7	4249	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.03228381748045	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCTATTCCTAGCAAG	0	True	NA	NA	False	ATTAAA	-15	NA	10816227	10940714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10816522_10819464_10819600_10819711_10819853_10823301_10823393_10844213_10844347_10874960_10875096_10912089_10912194_10918328_10918454_10926003_10926117_10929201_10929340_10933150_10933254_10934065_10934167_10935028_10935200_10938249
transcript_133302.known	chr3	+	4959	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	14.6599311133072	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	-9	True	NA	NA	False	AATAAA	-17	NA	11272415	11557665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_13331.known	chr1	-	3673	12	FSM	ENSG00000143393.17	ENST00000368873.6	3673	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	58.8360939425216	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCCCCTCCTCTCCTG	-11	True	NA	-15	True	AATAAA	-13	NA	151327416	151291803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151310210_151310256_151315572_151316510_151327270
transcript_133310.nic	chr3	-	3652	6	NIC	ENSG00000144560.16	novel	3725	6	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	43.4998850573194	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	1045	False	NA	-2	True	AATAAA	-15	NA	11719695	11556068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11719416
transcript_133311.known	chr3	-	3725	6	FSM	ENSG00000144560.16	ENST00000273038.7	3725	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	42.8924235734005	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGTACGTGTGCAGT	-6	True	NA	-3	True	AATAAA	-14	NA	11720746	11556069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11720393
transcript_133312.nnic	chr3	-	3692	6	NNC	ENSG00000144560.16	novel	792	5	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	54.5050456379958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	1045	False	NA	-2	True	AATAAA	-15	NA	11719695	11556068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_11558868_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11719416
transcript_133313.nic	chr3	-	1245	6	NIC	ENSG00000144560.16	novel	1428	7	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	43.4998850573194	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGGGTGGGGTGGGGG	1045	False	NA	NA	False	NA	NA	NA	11719695	11558475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11719416
transcript_133315.known	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	33.4617318738884	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-1	True	NA	-2	True	AATAAA	-15	NA	11643915	11556068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
transcript_133319.known	chr3	-	938	4	FSM	ENSG00000144560.16	ENST00000451674.6	938	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	61.8834029086601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGAACATCTGTCTAAT	9091	False	NA	NA	False	NA	NA	NA	11582391	11558342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11582285
transcript_133329.known	chr3	-	1213	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	113	0	7	0	multi-exon	FALSE	canonical	3	98	junction_5	12.6248863401633	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	82	False	NA	-1	True	AATAAA	-24	NA	11846772	11790441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_13333.nic	chr1	-	3772	12	NIC	ENSG00000143393.17	novel	3331	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	52.8459479513428	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTCATTTCCAGGT	-14	True	NA	-7	True	AATAAA	-14	NA	151327716	151292132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151324744_151324918_151327270
transcript_133330.known	chr3	-	1297	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	40.5202281445809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846919	11790441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_133333.nic	chr3	-	1907	5	ISM	ENSG00000144559.11	ENST00000444133.6	1619	7	-155	8997	-15	797	5prime_fragment	FALSE	canonical	3	98	junction_2	15.6524758424985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGTTTCAATTAATATT	NA	False	NA	-14	True	AATAAA	-15	NA	11846934	11816290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_133335.known	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	4.26468052730799	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	19	True	NA	-23	True	CATAAA	-31	NA	12158912	12153067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
transcript_133351.known	chr3	-	3191	17	FSM	ENSG00000132155.14	ENST00000251849.9	3191	17	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_13	40.1593991955806	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	5	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_133356.known	chr3	-	2354	16	FSM	ENSG00000132155.14	ENST00000684903.1	3129	16	76	699	0	-405	multi-exon	FALSE	canonical	3	29	junction_14	113.359879244035	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGGAAGCCATTTGC	-3	True	NA	NA	False	NA	NA	NA	12664125	12584332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12618514_12618748_12663812
transcript_133358.nic	chr3	-	3253	16	FSM	ENSG00000132155.14	ENST00000688543.1	4662	16	-91	1500	-77	0	multi-exon	FALSE	canonical	3	49	junction_11	108.464720326729	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	NA	False	NA	-26	True	AATAAA	-22	NA	12664278	12583600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_133372.known	chr3	+	2444	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	24.3324087525769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-10	NA	12484420	12533653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133376.known	chr3	+	2149	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	34.9502598153007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	-3	True	NA	21	True	AATAAA	-24	NA	12484490	12533317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133377.known	chr3	+	2753	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.5234379602473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-14	True	NA	NA	False	AATAGA	-15	NA	12484479	12533658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133380.known	chr3	+	2373	11	FSM	ENSG00000154743.19	ENST00000679756.1	2373	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	36.5069856328895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTCCTGTCTCAAAAAAAA	NA	False	NA	NA	False	AATAGA	-4	NA	12484434	12533647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133381.known	chr3	+	2358	11	FSM	ENSG00000154743.19	ENST00000415684.6	2358	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	36.337308651027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-16	NA	12484434	12533659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133382.known	chr3	+	2293	11	FSM	ENSG00000154743.19	ENST00000681676.1	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	43.8114140378966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGTGAGAAAGTCA	11	True	NA	5	True	AATAAA	-8	NA	12484504	12533301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133385.known	chr3	+	2107	10	FSM	ENSG00000154743.19	ENST00000681433.1	2107	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	38.207038327745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGCACATGCCTGTAA	NA	False	NA	NA	False	NA	NA	NA	12484434	12533520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133388.known	chr3	+	2521	10	FSM	ENSG00000154743.19	ENST00000680421.1	2521	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	47.2317637419231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGCAAGGTCCTGTCT	13	False	NA	NA	False	NA	NA	NA	12484562	12533638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_133390.known	chr3	+	1679	8	FSM	ENSG00000075975.17	ENST00000448482.1	1679	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7725166640322	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTACCAAAGGAG	-15	True	NA	-46	True	AGTAAA	-25	NA	12557089	12582626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12557177_12568874_12568998_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_133396.known	chr3	+	1436	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	48.0465630635764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAACAACTAACAAACA	-18	True	NA	62	True	NA	NA	NA	12557086	12582503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_133398.known	chr3	+	1587	6	FSM	ENSG00000154743.19	ENST00000490981.2	1587	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	46.3706803918166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGGAGTTCGAGACCAG	13	False	NA	NA	False	NA	NA	NA	12484562	12505574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_133399.known	chr3	+	2913	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	24.1389208540896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	12484434	12505766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
transcript_133404.known	chr3	-	1124	4	FSM	ENSG00000225526.6	ENST00000564146.4	1124	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTATGGCTTTCCTTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	12545499	12539775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12540434_12541859_12542023_12543179_12543230_12545246
transcript_133406.known	chr3	+	4573	15	FSM	ENSG00000144712.12	ENST00000456430.6	4573	15	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_2	7.85357061651396	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCCTCTGCACGACT	-10	True	NA	14	True	AATAAA	-18	NA	12796679	12834803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12796789_12803487_12803632_12807305_12807461_12808209_12808334_12810058_12810325_12812989_12813096_12813245_12813389_12815140_12815434_12815866_12816009_12816373_12817877_12820085_12820182_12825469_12825640_12827439_12827605_12831464_12831573_12833754
transcript_133408.known	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	10561	junction_3	1992.09526769067	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-8	True	NA	-26	True	NA	NA	NA	12841565	12834484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
transcript_133411.known	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	14107	junction_1	565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	28	True	NA	-39	True	AATAAA	-2	NA	12841529	12836059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12836224_12839348_12839531_12840141
transcript_133412.known	chr3	-	620	4	FSM	ENSG00000144713.13	ENST00000435983.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	6928.99272782287	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGGCATCTTCCTTCC	12	True	NA	-29	True	AATAAA	-12	NA	12841545	12836049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840354_12841493
transcript_133414.known	chr3	-	7206	40	FSM	ENSG00000132182.12	ENST00000254508.7	7206	40	0	0	0	0	multi-exon	FALSE	non_canonical	3	209	junction_31	30.9311763853855	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGTGATCGTTGCTGA	10	True	NA	-21	True	AATAAA	-20	NA	13420322	13316234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13351878_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
transcript_13342.known	chr1	-	3934	11	FSM	ENSG00000143393.17	ENST00000368874.8	3934	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	22.5690052948729	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTCTCCTGTGGCCCC	-13	True	NA	-8	True	AATAAA	-20	NA	151327715	151291796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151327270
transcript_133423.nnic	chr3	-	4488	21	NNC	ENSG00000132182.12	novel	7206	40	NA	NA	-6161	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_20	61.1011251942221	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGTGATCGTTGCTGA	NA	False	NA	-21	True	AATAAA	-20	NA	13347302	13316234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13347089
transcript_133430.known	chr3	-	3134	20	FSM	ENSG00000132182.12	ENST00000420141.2	3134	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	209	junction_11	19.2492040343407	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAAATTAGCTGGGCA	23	True	NA	NA	False	AATATA	-35	NA	13420309	13351662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
transcript_133442.nic	chr3	-	1882	11	ISM	ENSG00000132182.12	ENST00000420141.2	3134	20	-7	23480	6	-23480	5prime_fragment	FALSE	non_canonical	3	209	junction_2	22.8352797223945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAAAATAGAATAAAGA	16	True	NA	NA	False	AAAAAG	-17	NA	13420316	13375142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
transcript_133448.nic	chr3	+	1797	10	NIC	ENSG00000163517.15	novel	2819	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	18.819480319769	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCAGGCCCTTCTGTGG	-3	True	NA	7	True	AATAAA	-18	NA	13480342	13505334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133449.nic	chr3	+	2879	10	NIC	ENSG00000163517.15	novel	2819	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	18.819480319769	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	-3	True	NA	7	True	AATAAA	-19	NA	13480342	13506416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133451.known	chr3	+	2819	10	FSM	ENSG00000163517.15	ENST00000295757.8	2819	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	21.3148067702788	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	3	True	NA	7	True	AATAAA	-19	NA	13480305	13506416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133454.nic	chr3	+	3107	10	NIC	ENSG00000163517.15	novel	2766	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	25.1415744421884	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	96	False	NA	7	True	AATAAA	-19	NA	13480441	13506416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480774_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133460.nnic	chr3	+	2778	9	NIC	ENSG00000163517.15	novel	2819	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	27.1727689976565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	-3	True	NA	7	True	AATAAA	-19	NA	13480342	13506416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133465.nic	chr3	+	2712	8	NIC	ENSG00000163517.15	novel	1559	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	27.2126921168211	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	4	True	NA	7	True	AATAAA	-19	NA	13480349	13506416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133472.nic	chr3	+	2643	7	NIC	ENSG00000163517.15	novel	2819	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	27.1518364429042	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	-4	True	NA	7	True	AATAAA	-19	NA	13480341	13506416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133475.known	chr3	+	1018	7	FSM	ENSG00000163517.15	ENST00000402271.5	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	29.7078366017379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGGGCTTGAGGCCT	0	True	NA	NA	False	NA	NA	NA	13480302	13504849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133484.known	chr3	+	967	6	FSM	ENSG00000163517.15	ENST00000404040.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	32.4382490279608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGGCAGAGCCTGTGTC	21	True	NA	NA	False	NA	NA	NA	13480323	13504882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13502883_13502981_13504093_13504273_13504467
transcript_133485.known	chr3	+	1021	6	FSM	ENSG00000163517.15	ENST00000425430.5	1021	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	36.372517097391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAGAATTGGAGAGGAC	3	True	NA	NA	False	NA	NA	NA	13480305	13504956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_133489.known	chr3	+	576	5	FSM	ENSG00000163517.15	ENST00000405025.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	34.6049129459966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGTACCAGAAGCGCACA	30	False	NA	NA	False	NA	NA	NA	13480375	13504543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480447_13481245_13481395_13483463_13483565_13504093_13504273_13504467
transcript_133496.known	chr3	+	4127	17	FSM	ENSG00000163520.14	ENST00000295760.11	4127	17	0	0	0	0	multi-exon	FALSE	canonical	2	120	junction_1	29.1536875883652	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAAGTGTTCAGAG	29	False	NA	24	True	TATAAA	-33	NA	13549180	13638422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13626444_13626580_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
transcript_133506.known	chr3	-	1603	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	139.045156533968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-21	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
transcript_133507.known	chr3	-	1433	3	FSM	ENSG00000163528.13	ENST00000396914.4	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	16.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-21	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14113195_14116425_14116525_14124654
transcript_133513.known	chr3	-	3650	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	29.1520153677237	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	-13	True	NA	-11	True	AATAAA	-14	NA	14178601	14145146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_133520.known	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_10	17.7703439462196	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	-3	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
transcript_133528.nic	chr3	-	486	3	ISM	ENSG00000154767.15	ENST00000476581.6	2944	15	-81	24749	-61	-2207	5prime_fragment	FALSE	canonical	3	295	junction_1	14.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAAGTGAAAA	NA	False	NA	NA	False	AATGAA	-13	NA	14178682	14170477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_14170551_14172866_14173063_14178465
transcript_133529.known	chr3	-	557	4	FSM	ENSG00000154767.15	ENST00000511155.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.748372561499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGAAAGAAGGTAAGC	18	False	NA	NA	False	NA	NA	NA	14178621	14168270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14168381_14170437_14170551_14172866_14173063_14178483
transcript_133530.known	chr3	+	3359	4	FSM	ENSG00000170860.4	ENST00000306024.4	3359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_1	809.6307800473	554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTTGATGTTTCTCTG	-19	True	NA	6	True	AATAAA	-33	NA	14178816	14201122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14178882_14181559_14181671_14183936_14184033_14198035
transcript_133535.known	chr3	+	6500	15	FSM	ENSG00000131389.18	ENST00000622186.5	6500	15	0	0	0	0	multi-exon	FALSE	canonical	1	162	junction_8	103.357513080589	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGGTTGTGTTCTG	7	True	NA	12	True	AATAAA	-22	NA	14402605	14489349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14468087_14468213_14472204_14472318_14477204_14477343_14478465_14478569_14479084_14479186_14481670_14481842_14484866
transcript_13354.known	chr1	+	5378	10	FSM	ENSG00000143373.18	ENST00000324048.9	5378	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.7498701969852	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCAGGCCTCTCTTTTTC	25	False	NA	19	True	ATTAAA	-21	NA	151282311	151291903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151282396_151285205_151286075_151286274_151288407_151288527_151288707_151289094_151289272_151289377_151289541_151289677_151290008_151290121_151290235_151290431_151290574_151290714
transcript_133540.nnic	chr3	-	1507	10	NNC	ENSG00000144596.13	novel	7724	24	NA	NA	-46966	3197	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_1	7.31479137361457	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGATTAGGTGGCC	NA	False	NA	NA	False	ACTAAA	-24	NA	14603041	14517494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_14517898_14520109_14520280_14520389_14520538_14521641_14521788_14522999_14523076_14523611_14523699_14524392_14524539_14525436_14525573_14525850_14525932_14602927
transcript_133548.nnic	chr3	+	2585	6	NNC	ENSG00000131389.18	novel	1116	7	NA	NA	-4	-1438	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	216.417189705439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTAGCCTGGTGTGTGT	-27	True	NA	NA	False	AATAAA	-15	NA	14402571	14456588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14454931
transcript_133550.known	chr3	+	1252	5	FSM	ENSG00000131389.18	ENST00000621751.4	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	42.8281449516553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATATATGAAGCTGAAGT	21	True	NA	108	True	AATATA	-24	NA	14402619	14448188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581
transcript_133555.known	chr3	+	988	3	FSM	ENSG00000131389.18	ENST00000613930.4	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGTATCCAGGAATAAAA	22	True	NA	NA	False	NA	NA	NA	14402620	14444342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14402848_14416411_14416454_14443623
transcript_133557.nic	chr3	+	1435	2	ISM	ENSG00000131389.18	ENST00000613930.4	988	3	-37	26760	0	6259	5prime_fragment	FALSE	canonical	3	530	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGACGTGGTGGCGG	-15	True	NA	NA	False	ACTAAA	-13	NA	14402583	14417582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_14402848_14416411
transcript_133558.nic	chr3	+	1750	2	ISM	ENSG00000131389.18	ENST00000613930.4	988	3	-185	26593	-140	6426	5prime_fragment	FALSE	canonical	3	530	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGGCCATTCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	14402435	14417749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_14402848_14416411
transcript_133559.known	chr3	+	2940	11	FSM	ENSG00000154781.17	ENST00000383794.7	2940	11	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_7	33.3438150186808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCAGCTGCCTTTTTT	-2	True	NA	25	True	AATAAA	-17	NA	14651761	14672655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048_14668182_14669933_14670087_14670895
transcript_13356.known	chr1	-	2603	10	FSM	ENSG00000143393.17	ENST00000529142.5	2603	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	51.0533490032186	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTCATTTCCAGGT	6	True	NA	-7	True	AATAAA	-14	NA	151327657	151292132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151327270
transcript_133563.known	chr3	+	2720	13	NNC	ENSG00000154781.17	novel	2940	11	NA	NA	-16	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	87.6084645200197	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCCAGCTGCCTTTT	-18	True	NA	23	True	AATAAA	-15	NA	14651745	14672653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661640_14661643_14661668_14661668_14661699_14661841_14661847_14665022_14665054_14665055_14665124_14666804_14666948_14669933_14670087_14670895
transcript_133567.known	chr3	+	2682	2	FSM	ENSG00000154783.12	ENST00000640506.1	2682	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCAGCTGTAACTGTCCA	156	False	NA	NA	False	NA	NA	NA	14810852	14821624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14810866_14818955
transcript_133570.known	chr3	+	2494	14	FSM	ENSG00000177463.16	ENST00000425241.6	8419	14	1	5924	0	0	multi-exon	FALSE	canonical	3	35	junction_9	13.3983130617033	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATGTGTGTATATATAT	-4	True	NA	15	True	ATTAAA	-25	NA	14947583	15043349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14947907_15003875_15003987_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
transcript_133574.known	chr3	-	1184	6	FSM	ENSG00000225733.7	ENST00000430166.5	1184	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.54919333848297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGAGAGTGCATGTGCA	5	True	NA	-3	True	AATAAA	-22	NA	14948424	14920346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14920484_14921308_14921460_14922300_14922405_14923090_14923349_14923976_14924099_14948012
transcript_133583.known	chr3	-	1527	2	FSM	ENSG00000225733.7	ENST00000440079.1	1527	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTGTGGTTGTGTACT	-36	True	NA	-3	True	NA	NA	NA	14947505	14945023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14946155_14947109
transcript_133584.known	chr3	-	3818	2	FSM	ENSG00000225733.7	ENST00000655923.1	3818	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGTAATTGCTGTTAG	891	False	NA	-25	True	AATAAA	-9	NA	14947538	14942788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14946155_14947086
transcript_133585.known	chr3	-	3754	2	FSM	ENSG00000225733.7	ENST00000665738.1	3754	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAAACCTCACGTAATT	-40	True	NA	-33	True	AATAAA	-1	NA	14947509	14942796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14946155_14947113
transcript_133586.known	chr3	-	1874	2	FSM	ENSG00000225733.7	ENST00000426200.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTTGGGG	5	True	NA	NA	False	NA	NA	NA	14948424	14944692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14946155_14948012
transcript_133603.known	chr3	-	1119	4	FSM	ENSG00000131368.8	ENST00000449354.6	1119	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	327.380512553817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGCCACATTGAAACA	21	True	NA	NA	False	TATAAA	-32	NA	15065260	15049211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15049936_15053379_15053468_15059368_15059476_15065060
transcript_133605.known	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	55.1180551180827	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-34	True	NA	1	True	AATAAA	-21	NA	15065315	15048511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
transcript_133609.nnic	chr3	-	1812	3	NIC	ENSG00000131368.8	novel	1119	4	NA	NA	-44	-20	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAACATTTTTTTTCTA	NA	False	NA	-19	True	AATAAA	-1	NA	15065361	15048531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_15049936_15059368_15059476_15065060
transcript_133611.known	chr3	-	1281	3	FSM	ENSG00000131368.8	ENST00000444840.6	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	366.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACATTGGGGCCCTG	-36	True	NA	NA	False	NA	NA	NA	15065317	15051716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15052634_15059368_15059476_15065060
transcript_133614.nic	chr3	-	757	2	ISM	ENSG00000131368.8	ENST00000447299.1	723	4	-61	6585	-44	-6585	5prime_fragment	FALSE	canonical	3	744	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGGGCTCAGTATGG	NA	False	NA	NA	False	NA	NA	NA	15065361	15059019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_15059476_15065060
transcript_133619.known	chr3	-	6678	14	FSM	ENSG00000131381.12	ENST00000253699.7	6678	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	23.3002018936322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGGGTGTGTGTGTCTG	-6	True	NA	-11	True	AATAAA	-14	NA	15099148	15070072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
transcript_13362.known	chr1	+	4795	9	FSM	ENSG00000143373.18	ENST00000336715.11	4795	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	10.552695153372	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGAGCTCTTTTCCCTGG	12	True	NA	1	True	AATAAA	-4	NA	151282298	151292176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151282396_151286274_151288407_151288527_151288707_151289094_151289272_151289377_151289541_151289677_151290008_151290121_151290235_151290431_151290574_151290714
transcript_133624.known	chr3	-	3005	13	FSM	ENSG00000131381.12	ENST00000476527.6	3005	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	20.018567769837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAATAGAAACTAG	NA	False	NA	-69	True	NA	NA	NA	15099163	15073604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15099034
transcript_133629.nic	chr3	-	1846	13	NIC	ENSG00000131381.12	novel	3005	13	NA	NA	-53	-742	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	34.6156475536073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAGGAAATGGAGAGG	NA	False	NA	NA	False	AAAAAG	-5	NA	15099216	15075646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15091338_15091494_15095972_15096289_15096534_15096711_15099034
transcript_133631.nic	chr3	-	1794	13	ISM	ENSG00000131381.12	ENST00000253699.7	6678	14	-15	5574	0	-742	5prime_fragment	FALSE	canonical	3	44	junction_12	24.0589553666267	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAGGAAATGGAGAGG	NA	False	NA	NA	False	AAAAAG	-5	NA	15099163	15075646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
transcript_133634.nic	chr3	-	1632	12	ISM	ENSG00000131381.12	ENST00000476527.6	3005	13	6	2042	6	-742	5prime_fragment	FALSE	canonical	3	64	junction_11	20.4329178589698	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAGGAAATGGAGAGG	-15	True	NA	NA	False	AAAAAG	-5	NA	15099157	15075646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15099034
transcript_133641.known	chr3	-	582	3	FSM	ENSG00000131381.12	ENST00000507357.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	43	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGATGTCAAAGGGCAAAT	6	True	NA	NA	False	NA	NA	NA	15099136	15095997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15096289_15096534_15096711_15099021
transcript_133647.known	chr3	+	4348	21	FSM	ENSG00000131375.10	ENST00000253693.7	4348	21	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_14	20.8170603111967	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACTTCTTACAAT	17	True	NA	3	True	AATAAA	-13	NA	15206245	15252916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
transcript_133651.nnic	chr3	+	3517	19	NIC	ENSG00000131375.10	novel	4348	21	NA	NA	29	0	combination_of_known_splicesites	TRUE	canonical	3	63	junction_14	32.9940604456523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGCATAGTTTAAGTTA	-48	True	NA	16	True	AATAAA	-17	NA	15206180	15252302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15242177_15242254_15246731_15246795_15247326_15247458_15250930_15251024_15251115
transcript_133659.known	chr3	-	3279	9	FSM	ENSG00000131370.16	ENST00000383791.8	3279	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	3.04138126514911	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGTTGGCCAATCAT	-23	True	NA	NA	False	ATTAAA	-19	NA	15332586	15254352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15256304_15256852_15257114_15258830_15259051_15259760_15259804_15262158_15262290_15269712_15269878_15304102_15304232_15330503_15330567_15332270
transcript_133662.nic	chr3	-	2061	9	NIC	ENSG00000131370.16	novel	1880	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	12.4699639133399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACACACAAAGCAAAAAC	-34	True	NA	NA	False	AAAAAG	-9	NA	15332597	15255649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_15256304_15256852_15257114_15258830_15259051_15259760_15259804_15262158_15262290_15269712_15269878_15304102_15304300_15330503_15330567_15332270
transcript_133670.known	chr3	-	2783	16	FSM	ENSG00000206561.14	ENST00000681097.1	2783	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.71947707391615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTCTGGATGGGAAATA	-19	True	NA	-49	True	NA	NA	NA	15521716	15450179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15451714_15453828_15453932_15455898_15456020_15456459_15456580_15466340_15466438_15470535_15470617_15473999_15474036_15474227_15474273_15474924_15474952_15475424_15475488_15477125_15477198_15478976_15479004_15479337_15479383_15488205_15488308_15489524_15489638_15521519
transcript_133671.known	chr3	-	4020	7	FSM	ENSG00000206562.12	ENST00000443029.5	4020	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	88.0864474378563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTCTTGACTTAT	-1	True	NA	2	True	AATAAA	-21	NA	15427518	15381274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15384188_15411244_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_133676.known	chr3	+	4447	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	3.70944739819828	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	5	True	NA	12	True	AATAAA	-20	NA	15427597	15442613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
transcript_133677.known	chr3	-	2618	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	59.9546495277889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTCCATATCTGAT	-1	True	NA	NA	False	NA	NA	NA	15427544	15409759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_133680.nic	chr3	-	1163	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	70.7004950477718	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	-3	True	NA	-37	True	AATAAA	-18	NA	15427546	15413668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_133681.known	chr3	+	1037	5	FSM	ENSG00000144597.14	ENST00000449565.1	1037	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	37.2860563750043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAACAATCTCATCTT	5	True	NA	NA	False	NA	NA	NA	15427597	15439340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15427883_15429912_15430008_15434347_15434539_15436341_15436576_15439108
transcript_133684.known	chr3	-	2960	17	FSM	ENSG00000206561.14	ENST00000383788.10	2960	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	2.57921378524542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCTCTCTTCCGTT	-9	True	NA	-2	True	AATAAA	-26	NA	15521706	15450132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15451714_15453828_15453932_15455898_15456020_15456459_15456580_15458185_15458326_15466340_15466438_15470535_15470617_15473999_15474036_15474227_15474273_15474924_15474952_15475424_15475488_15477125_15477198_15478976_15479004_15479337_15479383_15488205_15488308_15489524_15489638_15521519
transcript_133685.known	chr3	+	2192	5	FSM	ENSG00000169814.16	ENST00000646371.1	2192	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	30.9707523318372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTATATTTTACACATCC	-23	True	NA	9	True	AATAAA	-5	NA	15601751	15645797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601771_15632590_15632867_15635423_15635689_15641907_15642058_15644315
transcript_133686.known	chr3	+	2264	5	FSM	ENSG00000169814.16	ENST00000303498.10	2264	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	30.4004522992669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACATCTTCCTCTAACA	10	False	NA	-59	True	NA	NA	NA	15601735	15645729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601895_15632590_15632867_15635423_15635689_15641907_15642058_15644315
transcript_133687.known	chr3	+	2083	4	FSM	ENSG00000169814.16	ENST00000449107.7	2083	4	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	16.2138486760204	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGGAGCCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	15601369	15645582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601771_15635423_15635689_15641907_15642058_15644315
transcript_133688.known	chr3	+	2069	4	FSM	ENSG00000169814.16	ENST00000672065.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	28.2174099134244	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	-30	True	NA	31	True	AATAAA	-27	NA	15601744	15645819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
transcript_133692.known	chr3	+	1112	4	FSM	ENSG00000169814.16	ENST00000436193.5	1112	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	25.5255862921022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAACCAGCTCCCACTC	194	False	NA	NA	False	NA	NA	NA	15601968	15644670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15602311_15635423_15635689_15641907_15642058_15644315
transcript_133693.nic	chr3	+	643	3	ISM	ENSG00000169814.16	ENST00000449107.7	2083	4	356	3342	0	0	5prime_fragment	FALSE	canonical	1	45	junction_2	14.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	0	True	NA	11	True	ATTAAA	-19	NA	15601725	15642240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_15601771_15635423_15635689_15641907
transcript_133694.known	chr3	+	760	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	34.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	-30	True	NA	23	True	ATTAAA	-31	NA	15601744	15642252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601895_15635423_15635689_15641907
transcript_133698.known	chr3	-	2009	17	FSM	ENSG00000131373.15	ENST00000321169.10	2009	17	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	14.6733974849044	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAAAAAGTTATTCT	-3	True	NA	NA	False	ATTAAA	-21	NA	15601569	15560698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_133701.known	chr3	-	1880	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	70.9749877695579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTACAGTAAAGGAAT	-3	True	NA	70	True	AATAAA	-17	NA	15601569	15560746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
transcript_133705.known	chr3	-	1734	14	FSM	ENSG00000131373.15	ENST00000451445.6	1734	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	83.6643052701172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	0	True	NA	71	True	AATAAA	-18	NA	15601587	15560745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_133710.known	chr3	-	6564	28	FSM	ENSG00000206560.12	ENST00000399451.6	6564	28	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_27	27.0815463164796	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTGTCTCTTTTA	42	False	NA	NA	False	AATAAA	-19	NA	15859771	15667235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15859376
transcript_133713.known	chr3	-	4019	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	12	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGCGCCTGGGGAGTTC	11	True	NA	-1	True	AATAAA	-19	NA	16264943	16257060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_16260830_16264154_16264230_16264768
transcript_133716.known	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-15	True	NA	-1	True	AATAAA	-40	NA	16264969	16257978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_16260830_16264768
transcript_133721.known	chr3	-	2986	10	FSM	ENSG00000131378.14	ENST00000334133.9	2986	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	5.00616903380836	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGAGTGTTTATCGTGT	-17	True	NA	0	True	AATAAA	-26	NA	16513699	16315844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_16317233_16323375_16323458_16326772_16326877_16357931_16358048_16370075_16370280_16377717_16378103_16409374_16409484_16433850_16434038_16493724_16493878_16513441
transcript_133726.known	chr3	+	1643	10	FSM	ENSG00000154814.14	ENST00000435829.6	1643	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	51.9211177569956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAACTCACTAAGCT	-5	True	NA	NA	False	NA	NA	NA	16265209	16337315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16337111
transcript_133728.known	chr3	+	3916	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	9.39331544237709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	-3	True	NA	3	True	ATTAAA	-16	NA	16265211	16306087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_133733.nnic	chr3	+	422	2	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAAGAAGCGGCCGAGGC	NA	False	NA	NA	False	ATTAAA	-12	NA	16884206	16884913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_+_16884537_16884821
transcript_133750.known	chr3	-	7822	11	FSM	ENSG00000182568.17	ENST00000338745.11	7822	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	12.4759769156567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGCCACATTTTTAAGA	-18	True	NA	0	True	AATAAA	-26	NA	18425339	18345376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18423626
transcript_133753.nic	chr3	-	3043	11	NIC	ENSG00000182568.17	novel	7822	11	NA	NA	-7	158	combination_of_known_junctions	FALSE	canonical	2	11	junction_10	18.2617085728581	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTTACTCTATTGTA	699	False	NA	26	True	AAAAAG	-9	NA	18444890	18348726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18444606
transcript_133754.known	chr3	+	1131	5	FSM	ENSG00000228956.9	ENST00000598149.6	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.39509972887452	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCTATTTATTGTTT	235	False	NA	NA	False	AATAAA	-19	NA	18445236	18469714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18468985
transcript_133757.nnic	chr3	+	2370	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.715115579788	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	-24	True	NA	17	True	AATAAA	-17	NA	19947091	19985175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_19947264_19947416_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_133758.nnic	chr3	+	2364	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	292.715115579788	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	-9	True	NA	17	True	AATAAA	-17	NA	19947106	19985175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_19947263_19947406_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_133759.known	chr3	+	2518	6	FSM	ENSG00000144566.11	ENST00000273047.9	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_4	47.9649872302704	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	-19	True	NA	17	True	AATAAA	-17	NA	19947096	19985175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_133760.known	chr3	+	1443	6	FSM	ENSG00000144566.11	ENST00000422242.1	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	317.269853594696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCTTGTTTTAGGAAT	4	True	NA	-42	True	TTTAAA	-22	NA	19947404	19984450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_19947522_19950805_19951062_19975642_19975753_19976046_19976170_19978309_19978404_19983707
transcript_133762.known	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	74.2782963329292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	8	True	NA	-21	True	AATAAA	-33	NA	20186191	20170484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_133764.known	chr3	-	1075	8	FSM	ENSG00000129810.15	ENST00000417364.1	1075	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	67.3264965883206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTAAGAGTACACAAAC	113	False	NA	NA	False	TTTAAA	-37	NA	20186127	20170643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_133769.known	chr3	-	2266	7	FSM	ENSG00000129810.15	ENST00000442720.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	73.0990576014645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCCTTCTATTCTT	-7	True	NA	0	True	AATAAA	-18	NA	20186206	20169480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_133774.nnic	chr3	-	1880	6	NNC	ENSG00000129810.15	novel	3070	8	NA	NA	-23	146	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_5	82.3271522646083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTCCCCAAAAAAAAATG	11	True	NA	NA	False	AATAAA	-17	NA	20186229	20174575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185311
transcript_133776.nic	chr3	-	1316	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-174	3932	-95	146	5prime_fragment	FALSE	canonical	3	150	junction_5	37.841775856849	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTCCCCAAAAAAAAATG	NA	False	NA	NA	False	AATAAA	-17	NA	20186301	20174575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_133777.nic	chr3	-	1155	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-60	4091	-45	146	5prime_fragment	FALSE	canonical	3	88	junction_5	57.7636563939645	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTCCCCAAAAAAAAATG	-11	True	NA	NA	False	AATAAA	-17	NA	20186251	20174575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_133780.nic	chr3	-	1252	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-174	3996	-95	82	5prime_fragment	FALSE	canonical	3	150	junction_5	37.841775856849	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTAACAGGAGAAAATCAAA	NA	False	NA	NA	False	AAAAAG	-17	NA	20186301	20174639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_133781.nic	chr3	-	1091	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-60	4155	-45	82	5prime_fragment	FALSE	canonical	3	88	junction_5	57.7636563939645	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTAACAGGAGAAAATCAAA	-11	True	NA	NA	False	AAAAAG	-17	NA	20186251	20174639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_133784.nic	chr3	-	417	2	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-174	13328	-95	-9250	5prime_fragment	FALSE	canonical	3	150	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGCGAATGAAAGAGAAAA	NA	False	NA	NA	False	CATAAA	-1	NA	20186301	20183971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20184035_20185947
transcript_133785.known	chr3	-	10478	8	FSM	ENSG00000151789.12	ENST00000281523.8	10478	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.86882248795452	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGATGATGCTTGTTC	-1	True	NA	NA	False	ATTAAA	-32	NA	21751210	21412217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_21421448_21423962_21424065_21425491_21425671_21436969_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
transcript_13379.known	chr1	-	307	2	FSM	ENSG00000232671.7	ENST00000494138.5	397	2	90	0	49	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTTTGTAAAGTAATTG	509	False	NA	0	True	ATTAAA	-18	NA	151281880	151280023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151280259_151281808
transcript_133790.known	chr3	+	985	1	FSM	ENSG00000132967.9	ENST00000451497.1	985	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGGGAACGTAGAAGA	204	False	NA	7	True	ATTAAA	-13	NA	22381944	22382929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_22381900_22382900
transcript_133791.known	chr3	+	1248	6	FSM	ENSG00000182247.10	ENST00000425792.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	39.3984771279297	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTATGTGATCTTT	NA	False	NA	NA	False	NA	NA	NA	23203019	23590222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23203263_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
transcript_133793.known	chr3	+	1783	6	FSM	ENSG00000170142.12	ENST00000306627.8	1783	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	28.0570846668003	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAGTACATGTCCTG	-27	True	NA	NA	False	GATAAA	-24	NA	23805954	23891640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23806089_23807236_23807422_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_133797.known	chr3	+	1398	5	FSM	ENSG00000170142.12	ENST00000346855.7	1398	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.5048541401682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTCATTTACTTT	-17	True	NA	24	True	AATAAA	-27	NA	23805964	23891316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23806089_23807236_23807422_23887566_23887700_23889111_23889260_23890508
transcript_133798.known	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	44.6507278776058	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	-6	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_133799.known	chr3	+	1138	5	FSM	ENSG00000170142.12	ENST00000475680.5	1138	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	50.2742478809977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATAAGAGATGAGTAGT	346	False	NA	NA	False	TATAAA	-23	NA	23810794	23891089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23811020_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_133800.known	chr3	-	1644	5	FSM	ENSG00000197885.11	ENST00000415901.6	1644	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	33.8156768378218	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAATAAAAGTATCAAA	30	True	NA	-43	True	NA	NA	NA	23916924	23892309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916783
transcript_133803.known	chr3	+	566	4	FSM	ENSG00000174748.22	ENST00000645079.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	10594.1480387366	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCGTGGCCTTGGAAA	7	True	NA	NA	False	NA	NA	NA	23917137	23919393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917174_23917836_23918032_23918439_23918577_23919195
transcript_133807.known	chr3	+	2221	4	FSM	ENSG00000174748.22	ENST00000413699.7	2221	4	0	0	0	0	multi-exon	FALSE	canonical	3	2379	junction_1	9493.77821991271	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	1	True	NA	23	True	CATAAA	-18	NA	23917131	23920989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917240_23917849_23918032_23918439_23918577_23919195
transcript_133810.known	chr3	+	824	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	10094.1415792638	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
transcript_133813.known	chr3	+	605	4	FSM	ENSG00000174748.22	ENST00000436146.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	10513.5616546757	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917174_23917946_23918032_23918439_23918577_23919195
transcript_133816.known	chr3	+	564	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	10394.8034453118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	-3	True	NA	13	True	AATAAA	-2	NA	23917147	23919537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
transcript_133819.known	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10592.7342394052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	123	False	NA	NA	False	NA	NA	NA	23917298	23919301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
transcript_13382.nic	chr1	-	3677	11	NIC	ENSG00000143390.18	novel	3576	11	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_9	106.940918267986	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTTCCTCCCT	367	False	NA	-20	True	ATTAAA	-16	NA	151346899	151340639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151346754
transcript_133825.known	chr3	+	1785	2	FSM	ENSG00000174748.22	ENST00000490223.1	1785	2	0	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	-3	True	NA	27	True	AATAAA	-16	NA	23917147	23919551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23918577_23919195
transcript_133826.known	chr3	-	778	2	FSM	ENSG00000223791.1	ENST00000426702.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACAGTAGGTGAATTTT	283	False	NA	NA	False	AATAAA	-23	NA	23806905	23804023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_23804715_23806818
transcript_133827.known	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_2	314	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	-17	True	NA	27	True	AATAAA	-16	NA	23917704	23919551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23918032_23918439_23918577_23919195
transcript_13383.known	chr1	-	2459	11	FSM	ENSG00000143390.18	ENST00000368870.6	2459	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	99.4034204642878	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCATGTAACTAGAAAG	NA	False	NA	-14	True	AATAAA	-11	NA	151347326	151341828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151347210
transcript_133830.known	chr3	+	3132	8	FSM	ENSG00000077092.20	ENST00000330688.9	3132	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.66651877999928	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGGGAGCTTTTACT	5	True	NA	6	True	AATAAA	-17	NA	25428262	25597932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_25428889_25461192_25461342_25501181_25501324_25569757_25569919_25580545_25580723_25593502_25593708_25594519_25594679_25596419
transcript_133832.known	chr3	-	5389	36	FSM	ENSG00000077097.16	ENST00000435706.6	5389	36	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_35	143.168221305696	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTCTCTTTACTG	416	False	NA	-5	True	ATTAAA	-11	NA	25664499	25597985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
transcript_133833.known	chr3	-	5814	36	FSM	ENSG00000077097.16	ENST00000264331.9	5814	36	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_35	176.726090378326	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTCTCTTTACTGAA	8	True	NA	-3	True	ATTAAA	-13	NA	25664907	25597983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645471_25664228
transcript_133835.nic	chr3	-	2509	15	ISM	ENSG00000077097.16	ENST00000424225.1	3525	27	-51	13417	-51	-1833	intron_retention	FALSE	canonical	3	630	junction_14	77.4088008496424	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATAGAAAACCAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	25664958	25628889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
transcript_133836.nic	chr3	-	2486	15	ISM	ENSG00000077097.16	ENST00000264331.9	5814	36	-13	30906	-13	-1833	5prime_fragment	FALSE	canonical	3	220	junction_14	160.993661936343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATAGAAAACCAGAAAGC	-5	True	NA	NA	False	NA	NA	NA	25664920	25628889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645471_25664228
transcript_133840.known	chr3	-	2534	12	FSM	ENSG00000151092.18	ENST00000280700.10	2534	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	26.8940375585063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-1	True	NA	-1	True	AATAAA	-19	NA	25783443	25718943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_133841.known	chr3	-	2086	12	FSM	ENSG00000151092.18	ENST00000308710.9	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	100.85854589965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTTCCATATGTGAC	6628	False	NA	-23	True	AATAAA	-14	NA	25783381	25719275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25736401_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_133847.known	chr3	-	2024	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	79.6972396008795	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATATGTGACTATAA	4	True	NA	-18	True	AATAAA	-19	NA	25783438	25719270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_133858.known	chr3	+	1506	3	FSM	ENSG00000151093.8	ENST00000280701.8	1506	3	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGAAGAAATTATG	-4	True	NA	NA	False	ATTAAA	-17	NA	25790089	25794531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_25790148_25790989_25791998_25794091
transcript_133859.known	chr3	+	1696	2	FSM	ENSG00000179796.12	ENST00000396641.6	1696	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	-14	True	NA	14	True	AATAAA	-25	NA	26622805	26710776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_26623238_26709512
transcript_133860.known	chr3	+	905	2	FSM	ENSG00000179796.12	ENST00000469437.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCAATAGTGTGGACAG	32	False	NA	NA	False	AATGAA	-44	NA	26624677	26709583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_26625512_26709512
transcript_133863.nic	chr3	-	3403	22	ISM	ENSG00000033867.17	ENST00000437179.5	3667	24	-74	9286	-1	0	5prime_fragment	FALSE	canonical	3	67	junction_16	26.183115848874	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAGATAACAATTTTA	3	True	NA	NA	False	AAAAAG	-34	NA	27484421	27385891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
transcript_133868.nic	chr3	-	580	3	ISM	ENSG00000033867.17	ENST00000428005.1	1572	7	-55	25056	-55	-25056	5prime_fragment	FALSE	canonical	3	82	junction_2	2.5	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAAGAATCAGATAAAGA	NA	False	NA	NA	False	AAGAAA	-2	NA	27484475	27448696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_27448798_27452416_27452499_27484078
transcript_133869.nnic	chr3	-	3113	7	NNC	ENSG00000163508.13	novel	3264	6	NA	NA	-4	132	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	99.041517669219	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAATTTAAAAGTGTAC	-7	True	NA	25	True	NA	NA	NA	27722715	27716376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_27717610_27717728_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_133872.known	chr3	-	3386	6	FSM	ENSG00000163508.13	ENST00000295743.8	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	102.009019209088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCTCTGTCTTCTGTGC	210	False	NA	-12	True	AATAAA	-23	NA	27722498	27715948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_27717752_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_133875.known	chr3	-	3264	6	FSM	ENSG00000163508.13	ENST00000449599.4	3264	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	25.350345165303	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATAGCTCTGTCTTCT	0	True	NA	-16	True	AATAAA	-19	NA	27722323	27715952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_133876.known	chr3	-	2080	6	FSM	ENSG00000163508.13	ENST00000461503.2	2080	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	110.107947033809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCCATGTTTGCCCTA	-3	True	NA	-107	True	NA	NA	NA	27722711	27716508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27722429
transcript_133878.known	chr3	+	332	3	FSM	ENSG00000225548.7	ENST00000455984.1	332	3	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCCTGGATTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	27821597	27860192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_27821725_27824649_27824749_27860086
transcript_133879.known	chr3	-	4403	8	FSM	ENSG00000163512.14	ENST00000479665.6	4403	8	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	41.8071373654533	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAACTTGAATTGATT	15	True	NA	-19	True	AATAAA	-39	NA	28348824	28321046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_13388.known	chr1	-	2056	11	FSM	ENSG00000143390.18	ENST00000392746.7	2056	11	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_9	101.49679797905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTTCAAAGTTCCT	0	True	NA	NA	False	AATAAA	-12	NA	151346822	151342246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346421_151346607_151346754
transcript_133885.known	chr3	-	1366	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	53.5892298466358	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTGTTTTATCATTT	53	False	28349071	-16	True	AATAAA	-14	NA	28349050	28331690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_13389.nic	chr1	-	2354	11	NIC	ENSG00000143390.18	novel	2459	11	NA	NA	-27	-3	intron_retention	FALSE	canonical	0	0	junction_9	106.940918267986	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTATTCCCTGTGCT	367	False	NA	-10	True	AATAAA	-13	NA	151346899	151341962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151346754
transcript_133892.known	chr3	+	670	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	321.121083082379	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	-4	True	NA	15	True	AATAAA	-15	NA	28241623	28319773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
transcript_133893.known	chr3	+	6009	4	FSM	ENSG00000187118.14	ENST00000466830.6	6009	4	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_2	112.018847620489	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGCCAAAAAAAAAAAGTTT	-9	True	NA	NA	False	AGTAAA	-15	NA	28241618	28325142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_28241813_28263290_28263381_28316332_28316424_28319508
transcript_133896.known	chr3	+	549	3	FSM	ENSG00000187118.14	ENST00000423894.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	269	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGGTTTCTTAAATG	-10	True	NA	13	True	AATAAA	-13	NA	28241617	28319771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_28241813_28316332_28316424_28319508
transcript_133903.known	chr3	+	4107	16	FSM	ENSG00000163527.10	ENST00000295770.4	4107	16	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	46.8140529708287	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGTGTTGTTTTTTAC	-4	True	NA	22	True	AATAAA	-17	NA	31532924	31637616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675_31619831_31622096_31622309_31623673_31623862_31624913_31625086_31625953_31626128_31629297_31629412_31632934_31633148_31635983
transcript_133907.known	chr3	+	1664	10	FSM	ENSG00000163527.10	ENST00000423527.5	1664	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	239.224209105647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-1	True	NA	NA	False	NA	NA	NA	31532971	31620274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675_31619831_31619964
transcript_133908.nic	chr3	+	2211	9	ISM	ENSG00000163527.10	ENST00000423527.5	1664	10	-391	-22	-57	0	intron_retention	TRUE	canonical	3	656	junction_6	51.2786505282657	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCATTGAATTTGTATT	-14	True	NA	NA	False	AAAAAG	-5	NA	31532580	31620296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675
transcript_133913.nic	chr3	-	3488	12	NIC	ENSG00000144645.15	novel	3625	12	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	54.604967533539	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	-6	True	NA	NA	False	AATATA	-16	NA	31960369	31660824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31960142
transcript_133914.known	chr3	-	3625	12	FSM	ENSG00000144645.15	ENST00000396556.7	3625	12	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_6	24.1595933412221	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	17	True	NA	NA	False	AATATA	-16	NA	31981262	31660824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31980898
transcript_133915.nnic	chr3	-	3376	12	NNC	ENSG00000144645.15	novel	3625	12	NA	NA	-563	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	63.0184283686097	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	19	False	NA	NA	False	AATATA	-16	NA	31981868	31660824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31981753
transcript_133919.known	chr3	-	2624	11	FSM	ENSG00000144645.15	ENST00000438237.6	2624	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	58.5580054305131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTCAAAATGAAGG	-21	True	NA	NA	False	NA	NA	NA	31981300	31661671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31876432_31876513_31879654_31879831_31980898
transcript_133928.nic	chr3	-	1594	7	ISM	ENSG00000144645.15	ENST00000396556.7	3625	12	-373	41641	-330	-90	5prime_fragment	FALSE	canonical	3	172	junction_1	19.7772315779759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGACAATGAAGATAAGGAA	-3	True	NA	NA	False	NA	NA	NA	31981635	31702465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31980898
transcript_133929.known	chr3	-	758	5	FSM	ENSG00000144645.15	ENST00000466604.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	100.641380654282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGAGGGAGATGTGTG	27	False	NA	-7	True	AATAAA	-18	NA	31960336	31822127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_31822244_31830039_31830232_31876432_31876513_31879654_31879831_31960142
transcript_133931.known	chr3	+	3217	2	FSM	ENSG00000197385.6	ENST00000360311.5	3217	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAACTAATACAGATGC	-11	True	NA	102	True	AATACA	-31	NA	31981749	31991723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_31981903_31988659
transcript_133932.known	chr3	+	3947	8	FSM	ENSG00000152642.11	ENST00000282541.10	3947	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	8.95795166090908	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCACCGTGGATCCTGTT	-39	True	NA	8	True	AATAAA	-17	NA	32106619	32168709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32106759_32128075_32128254_32138586_32138728_32140227_32140367_32146621_32146735_32158875_32159110_32159567_32159675_32165813
transcript_133935.known	chr3	+	1169	4	FSM	ENSG00000170293.9	ENST00000307526.4	1169	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	8.2192186706253	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTGTGTTTGATTGG	-27	True	NA	31	True	ATTAAA	-17	NA	32238679	32370321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32239120_32357372_32357547_32367871_32367989_32369883
transcript_133937.known	chr3	+	976	5	FSM	ENSG00000153551.14	ENST00000454304.6	976	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	142.717159094483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGGCACCAGGAAAGGC	-4	True	NA	NA	False	NA	NA	NA	32391888	32454358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452065_32452474_32454240
transcript_133938.known	chr3	+	1856	5	FSM	ENSG00000153551.14	ENST00000334983.10	1856	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	66.027929696455	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGCACCCGTGGTGT	-1	True	NA	NA	False	NA	NA	NA	32391852	32455528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454240
transcript_133940.known	chr3	+	1214	4	FSM	ENSG00000153551.14	ENST00000349718.8	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	134.650164005346	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCCAGTTGCACAAGGA	4	True	NA	7	True	AATAAA	-8	NA	32391697	32454830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32452391_32452474_32454240
transcript_133942.known	chr3	-	3307	4	FSM	ENSG00000091317.8	ENST00000205636.4	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_1	37.4195433192633	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTTGTAAGTGTTTA	-32	True	NA	-11	True	AATAAA	-20	NA	32502852	32481311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32484098_32487937_32488037_32491709_32491887_32502607
transcript_133944.nic	chr3	+	1539	3	ISM	ENSG00000153551.14	ENST00000454304.6	976	5	-220	3937	-29	-3937	5prime_fragment	FALSE	canonical	3	244	junction_2	60.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTCTGTATGTGACAT	-25	True	NA	NA	False	AAAAAG	-19	NA	32391668	32450421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_32392066_32441839_32442014_32449453
transcript_133945.known	chr3	+	780	3	FSM	ENSG00000153551.14	ENST00000465248.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	177.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATTGACTCGGCCAG	146	False	NA	-4	True	NA	NA	NA	32392038	32454819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32454240
transcript_133948.nic	chr3	+	1016	2	ISM	ENSG00000153551.14	ENST00000454304.6	976	5	-151	11831	40	-11831	5prime_fragment	FALSE	canonical	3	365	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGGCTGTGGCTATTG	-2	True	NA	NA	False	NA	NA	NA	32391737	32442527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_32392066_32441839
transcript_133949.known	chr3	-	2485	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	36.8083437099072	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTTGCATTCTCTTA	33	False	32570891	-3	True	AATAAA	-29	NA	32570858	32525973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
transcript_133954.nic	chr3	-	979	7	ISM	ENSG00000144635.9	ENST00000273130.9	2485	13	-16	8630	-16	-4974	5prime_fragment	FALSE	canonical	3	310	junction_3	32.1234597555535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGACTTAGTATATAAAT	17	False	NA	NA	False	AGTAAA	-13	NA	32570874	32534603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
transcript_133957.known	chr3	-	814	3	FSM	ENSG00000144635.9	ENST00000475193.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTGCTGATGGTAAAAA	-8	True	NA	NA	False	NA	NA	NA	32570825	32545426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32545966_32570345_32570420_32570624
transcript_133964.known	chr3	+	2815	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-43	0	0	0	multi-exon	FALSE	canonical	3	272	junction_12	36.650206743223	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	7	True	NA	17	True	ATTAAA	-18	NA	32685144	32773875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_133969.known	chr3	+	2573	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	84.4280984402016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	7	True	NA	13	True	AATAAA	-20	NA	32685144	32773714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_133984.nic	chr3	+	2042	4	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	53	63545	10	1394	5prime_fragment	FALSE	canonical	3	338	junction_3	22.4845626053867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTCCTGAATTCATG	-9	True	NA	NA	False	NA	NA	NA	32685197	32710169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669
transcript_133986.nnic	chr3	+	2946	4	NNC	ENSG00000206557.6	novel	8704	4	NA	NA	-36914	-5550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0144013718152	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATAAAACATGGAAAAAAT	NA	False	NA	63	True	AGTAAA	-12	NA	32781082	32892274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_32781811_32873817_32873986_32885933_32886069_32890359
transcript_133988.nnic	chr3	+	3572	4	NNC	ENSG00000206557.6	novel	8704	4	NA	NA	-1365	-5550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0144013718152	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATAAAACATGGAAAAAAT	1	True	NA	63	True	AGTAAA	-12	NA	32816631	32892274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_32817986_32873817_32873986_32885933_32886069_32890359
transcript_133991.nnic	chr3	+	2463	4	NNC	ENSG00000206557.6	novel	8704	4	NA	NA	1984	-5550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0144013718152	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATAAAACATGGAAAAAAT	1694	False	NA	63	True	AGTAAA	-12	NA	32819980	32892274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_32820226_32873817_32873986_32885933_32886069_32890359
transcript_133994.nnic	chr3	+	2441	4	NNC	ENSG00000206557.6	novel	8704	4	NA	NA	50914	-5550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0144013718152	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATAAAACATGGAAAAAAT	3066	False	NA	63	True	AGTAAA	-12	NA	32868910	32892274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_32869134_32873817_32873986_32885933_32886069_32890359
transcript_134004.known	chr3	-	2512	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	120.161446950897	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTTTGATCTGTGG	307	False	NA	-4	True	AATAAA	-38	NA	33096835	32996608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
transcript_134005.known	chr3	-	2523	16	FSM	ENSG00000170266.16	ENST00000307363.10	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_6	34.6657692191527	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATAGTCTTGGTTTG	-4	True	NA	-12	True	AATAAA	-30	NA	33097146	32996616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_134020.known	chr3	-	2018	13	FSM	ENSG00000170266.16	ENST00000307377.12	2018	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	200.672342112432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACTGTTTTTAAT	-4	True	NA	-14	True	AATAAA	-16	NA	33097146	32996728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33065462_33065558_33072543_33072714_33097010
transcript_134028.known	chr3	-	4310	2	FSM	ENSG00000188167.9	ENST00000342462.5	4310	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATCCATGCTTTTCTT	-4	True	NA	NA	False	AATAAA	-27	NA	33097146	33090421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33094304_33096718
transcript_134029.known	chr3	-	3451	2	FSM	ENSG00000188167.9	ENST00000416695.6	3451	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATCCATGCTTTTCTTC	9	True	NA	NA	False	AATAAA	-28	NA	33096801	33090420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33093789_33096718
transcript_134034.known	chr3	+	6595	7	FSM	ENSG00000170275.15	ENST00000320954.11	6595	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	340.724554768544	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATTTTCTATTCTAT	-4	True	NA	9	True	ATTAAA	-17	NA	33114013	33147773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33129938_33130068_33132554_33132701_33134181_33134266_33142394
transcript_134039.known	chr3	+	1811	6	FSM	ENSG00000170275.15	ENST00000449224.1	1811	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	452.400972589582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGATAATTGTGAAAAC	2	True	NA	15	True	AAGAAA	-12	NA	33114053	33143158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33132554_33132701_33134181_33134266_33142394
transcript_134042.known	chr3	-	4602	5	FSM	ENSG00000173705.9	ENST00000309558.8	4602	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	3.63145976158349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGCTGAATGTATTTTA	12	True	NA	-5	True	AATAAA	-16	NA	33218810	33150042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33154034_33174885_33175075_33207807_33207927_33213927_33214106_33218685
transcript_134044.known	chr3	-	729	4	FSM	ENSG00000173705.9	ENST00000412539.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	13.0213499897497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTGGATGATGACACC	29	True	NA	NA	False	NA	NA	NA	33218793	33153709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33154034_33207807_33207927_33213927_33214106_33218685
transcript_134045.known	chr3	+	1581	15	FSM	ENSG00000153558.16	ENST00000421391.5	1581	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	7.29411280641128	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGGATCTCTTAAGA	14	True	NA	NA	False	NA	NA	NA	33277476	33385862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373240_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
transcript_134049.known	chr3	-	2074	17	FSM	ENSG00000153560.12	ENST00000283628.9	2074	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	93.954776355436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGCACATCGGCACAG	82	False	NA	NA	False	NA	NA	NA	33440510	33390133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735_33439926_33440333
transcript_134050.known	chr3	-	4175	16	FSM	ENSG00000153560.12	ENST00000283629.8	4175	16	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_8	72.5853979805856	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-27	True	NA	0	True	AATAAA	-23	NA	33440405	33388335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
transcript_134052.known	chr3	-	3669	15	FSM	ENSG00000153560.12	ENST00000447368.6	3669	15	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	45.7925669041764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTCTCATTTAAA	582	False	NA	-3	True	AATAAA	-20	NA	33440010	33388338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
transcript_134054.nnic	chr3	-	6393	37	NIC	ENSG00000163539.18	novel	7282	39	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	56.0429453936449	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTATATCAGTTTTT	-23	True	NA	-17	True	AATAAA	-29	NA	33718257	33496992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_33498718_33501651_33501769_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697_33544842_33551251_33551396_33559306_33559386_33560807_33560972_33570726_33570791_33573109_33573355_33574472_33574497_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
transcript_134055.nnic	chr3	-	5631	37	NIC	ENSG00000163539.18	novel	7282	39	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	56.0429453936449	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGCGTGTGTGTCCTT	-23	True	NA	69	True	AATAAA	-28	NA	33718257	33497754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_33498718_33501651_33501769_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697_33544842_33551251_33551396_33559306_33559386_33560807_33560972_33570726_33570791_33573109_33573355_33574472_33574497_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
transcript_134062.nic	chr3	-	3115	18	ISM	ENSG00000163539.18	ENST00000682230.1	7159	39	-3	105771	-3	397	5prime_fragment	FALSE	canonical	3	173	junction_10	19.244735944972	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTCGGATTTTGGATT	-23	True	NA	NA	False	NA	NA	NA	33718257	33602015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
transcript_134070.known	chr3	+	5884	18	FSM	ENSG00000170248.15	ENST00000307296.8	5884	18	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_10	47.7367347830878	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTGGAGTATGAATTC	8	True	NA	14	True	AATAAA	-17	NA	33798629	33869703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_134072.nic	chr3	+	2075	14	ISM	ENSG00000170248.15	ENST00000307296.8	5884	18	-61	15800	-2	-1426	5prime_fragment	FALSE	canonical	3	404	junction_10	46.2454219707685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACAATCTAATAATGAA	-53	True	NA	NA	False	NA	NA	NA	33798568	33853903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878
transcript_134074.known	chr3	+	3067	11	FSM	ENSG00000144681.11	ENST00000273183.8	3067	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	6.96060342211794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCCTGATCTCTTCT	-8	True	NA	27	True	AATAAA	-34	NA	36380503	36548007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36380755_36443363_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_134077.nic	chr3	+	3165	11	NIC	ENSG00000144681.11	novel	3067	11	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	14.9067098985658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCCTGATCTCTTCT	1	True	NA	27	True	AATAAA	-34	NA	36380372	36548007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_36380755_36443396_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_134079.known	chr3	+	1366	9	FSM	ENSG00000144681.11	ENST00000457375.6	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	14.6628782986152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGACGAGGCTGAGAG	-9	True	NA	NA	False	AAAACA	-36	NA	36380502	36546488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36380755_36443363_36443641_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_13408.known	chr1	+	618	2	FSM	ENSG00000237976.2	ENST00000455503.2	647	2	29	0	29	0	multi-exon	FALSE	canonical	3	134	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGAACATTGTACTGA	15	True	NA	NA	False	NA	NA	NA	151346966	151348027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151347189_151347631
transcript_134081.nic	chr3	-	3886	3	ISM	ENSG00000168016.15	ENST00000646436.1	8408	12	23542	-12	17548	0	3prime_fragment	FALSE	canonical	3	28	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTGCCGTTTTATTTC	NA	False	NA	-2	True	TATAAA	-18	NA	36833103	36826819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_36828376_36829563_36829663_36830872
transcript_134085.known	chr3	+	2494	19	FSM	ENSG00000076242.16	ENST00000231790.8	2494	19	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_11	29.8331264217944	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	5	True	NA	31	True	AATAAA	-20	NA	36993517	37050846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_134086.known	chr3	+	2428	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	91.8611405100245	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	-16	True	NA	29	True	AATAAA	-18	NA	36993803	37050844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_134088.known	chr3	+	2205	18	FSM	ENSG00000076242.16	ENST00000673673.1	2205	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	71.2067995664618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACAGTGGATTGATTA	82	False	NA	-16	True	NA	NA	NA	36993594	37050799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37048516_37048610_37048903_37049018_37050485
transcript_134089.known	chr3	+	2403	18	FSM	ENSG00000076242.16	ENST00000674111.1	2403	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	73.5927727006642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATACACAGTGGATTGA	-18	True	NA	-19	True	NA	NA	NA	36993494	37050796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_134095.known	chr3	+	2183	17	FSM	ENSG00000076242.16	ENST00000413212.2	2183	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	98.3773824362084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGATGTGTCTTAACA	1	True	NA	8	True	TATAAA	-1	NA	36993784	37050823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_134096.known	chr3	+	1978	16	FSM	ENSG00000076242.16	ENST00000673715.1	1978	16	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_11	18.4306507993855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGGCTCATGGCTGTA	10	True	NA	13	True	AATAAA	-14	NA	36993522	37047740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518
transcript_134103.known	chr3	-	1989	15	FSM	ENSG00000093167.18	ENST00000440230.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	47.5446621394998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCATTAAAACAGCCACCT	1	True	NA	-36	True	NA	NA	NA	37176308	37053749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37091466_37091539_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
transcript_134104.known	chr3	-	2522	15	FSM	ENSG00000093167.18	ENST00000421276.6	2522	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	41.4140368592533	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	-28	True	NA	2	True	ATTAAA	-23	NA	37176337	37053003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37091466_37091539_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
transcript_134107.nic	chr3	-	2709	14	NIC	ENSG00000093167.18	novel	2522	15	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	35.5719123290492	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	201	False	NA	2	True	ATTAAA	-23	NA	37176354	37053003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
transcript_134108.known	chr3	-	2821	14	FSM	ENSG00000093167.18	ENST00000354379.8	2821	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	22.0542633643561	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATAAAATCTCTAATAT	195	False	NA	-30	True	AATAAA	-28	NA	37176360	37052655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
transcript_134109.nic	chr3	-	1992	14	NIC	ENSG00000093167.18	novel	1989	15	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	35.5719123290492	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTTATGACAGAATGAA	201	False	NA	-7	True	ATTAAA	-20	NA	37176354	37053720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
transcript_13411.known	chr1	-	1724	12	FSM	ENSG00000143416.21	ENST00000443708.5	1724	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	73.4852546068128	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGATGGCCTTGTCTTTG	-4	True	NA	-44	True	AATAAA	-16	NA	151372707	151364307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151368999_151369190_151369441_151369555_151369712_151369770_151372637
transcript_134118.nnic	chr3	-	782	3	NNC	ENSG00000093167.18	novel	409	3	NA	NA	-10	-21	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	64	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTGATCATGTGTTAT	185	False	NA	3	True	AATAAA	-42	NA	37176370	37172790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_37173195_37174538_37174606_37176059
transcript_134124.nic	chr3	+	3223	15	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	6	41995	6	-209	5prime_fragment	FALSE	canonical	3	86	junction_2	20.6868044306273	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAAAAAGTTAAGCAGA	10	True	NA	NA	False	AAGAAA	-5	NA	37243257	37324750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_13414.known	chr1	-	1887	12	FSM	ENSG00000143416.21	ENST00000423070.5	1887	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	89.582225952538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACCAAGAAATAAACTCG	11	False	NA	-75	True	NA	NA	NA	151372692	151364338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151368999_151369190_151369441_151369555_151369712_151369979_151372637
transcript_134140.nic	chr3	+	1973	12	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	-287	51239	-226	0	5prime_fragment	FALSE	canonical	3	86	junction_2	23.0141889399123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACTATCGAAAAAACA	9114	False	NA	NA	False	AAAACA	-44	NA	37242964	37315506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419
transcript_134146.known	chr3	+	1617	11	FSM	ENSG00000144674.17	ENST00000450863.6	1617	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.2867846231904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACTATCGAAAAAACA	22	True	NA	NA	False	AAAACA	-44	NA	37243269	37315506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37289234_37289292_37294981_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419
transcript_134156.known	chr3	-	2389	1	FSM	ENSG00000270194.1	ENST00000604992.1	2389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCCCATCCACCTA	10	True	NA	NA	False	AATAAA	-39	NA	37244177	37241788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37241800_37244200
transcript_134169.known	chr3	-	895	4	FSM	ENSG00000235257.10	ENST00000366441.4	895	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	37861765	37818276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37818931_37821013_37821101_37834678_37834768_37861700
transcript_134170.known	chr3	+	4753	8	FSM	ENSG00000144677.15	ENST00000273179.10	4753	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	43.1367072248692	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	-7	True	NA	19	True	AATAAA	-15	NA	37861879	37984469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37862279_37947056_37947212_37957110_37957144_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
transcript_134171.known	chr3	+	4640	7	FSM	ENSG00000144677.15	ENST00000443503.6	4640	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	27.1584854756913	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	-3	True	NA	19	True	AATAAA	-15	NA	37861959	37984469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37862279_37947056_37947212_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
transcript_134176.known	chr3	+	2831	20	FSM	ENSG00000136059.16	ENST00000383759.7	2831	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.0265575326569	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGTGGTATGCGTGCT	0	True	NA	15	True	AGTAAA	-16	NA	37990785	38007185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37990830_37993586_37993733_37993897_37993973_37994260_37994467_37995738_37995848_37997076_37997188_37997482_37997686_37998089_37998169_37998265_37998365_37998911_37999051_37999338_37999440_38001455_38001594_38001701_38001861_38002395_38002576_38003167_38003314_38004254_38004400_38005791_38005975_38006180_38006253_38006448_38006701_38006941
transcript_134180.nic	chr3	+	2693	17	ISM	ENSG00000136059.16	ENST00000383759.7	2831	20	3347	1	-20	0	3prime_fragment	FALSE	canonical	3	13	junction_6	8.0231598357505	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTGTGGTATGCGTGC	-25	True	NA	14	True	AGTAAA	-15	NA	37994132	38007184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37994467_37995738_37995848_37997076_37997188_37997482_37997686_37998089_37998169_37998265_37998365_37998911_37999051_37999338_37999440_38001455_38001594_38001701_38001861_38002395_38002576_38003167_38003314_38004254_38004400_38005791_38005975_38006180_38006253_38006448_38006701_38006941
transcript_134203.known	chr3	-	2963	15	FSM	ENSG00000187091.14	ENST00000463876.5	2963	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	27.5633778031352	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGTGGTCTCTTTAC	4853	False	NA	-7	True	TATAAA	-16	NA	38024787	38007497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38024336
transcript_134204.known	chr3	-	2651	15	FSM	ENSG00000187091.14	ENST00000334661.5	2651	15	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_14	18.3243175110261	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTCTCTTTACCT	-2	True	NA	-5	True	TATAAA	-18	NA	38029642	38007495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38029505
transcript_13421.known	chr1	-	1922	11	FSM	ENSG00000143416.21	ENST00000463664.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	75.4035145069512	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAGGCACCAAGAAATA	9	False	NA	-81	True	NA	NA	NA	151372694	151364344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
transcript_134216.known	chr3	-	1699	12	FSM	ENSG00000060971.19	ENST00000333167.13	1699	12	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	27.7598913947431	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	32	False	38137147	-15	True	AGTAAA	-15	NA	38137127	38122714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_134224.nic	chr3	-	1894	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	145	junction_7	21.0817456582703	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	5	False	NA	-15	True	AGTAAA	-15	NA	38137154	38122714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_134226.nic	chr3	-	1634	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	52.2605013370519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	NA	False	NA	-15	True	AGTAAA	-15	NA	38137242	38122714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_134229.known	chr3	-	1612	10	FSM	ENSG00000060971.19	ENST00000625927.3	1612	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	68.3890468452007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGTGGTTTTTTTCC	22	False	38137147	-11	True	AGTAAA	-19	NA	38137137	38122710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38136591_38136686_38136864
transcript_13423.known	chr1	-	1530	11	FSM	ENSG00000143416.21	ENST00000447402.7	1530	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	73.4495745392715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTTGTCTTTGGGG	3	True	NA	-41	True	AATAAA	-19	NA	151372700	151364304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369441_151369555_151369712_151369770_151372637
transcript_134232.known	chr3	-	1944	10	FSM	ENSG00000060971.19	ENST00000411549.5	1944	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	46.7018385975869	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTTTTTTTCCA	NA	False	NA	-10	True	AGTAAA	-20	NA	38137242	38122709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_134235.nic	chr3	-	2174	10	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	145	junction_6	21.6218910560456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	5	False	NA	-15	True	AGTAAA	-15	NA	38137154	38122714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_134239.nic	chr3	-	2137	9	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-23	0	intron_retention	FALSE	canonical	3	43	junction_5	49.502367367632	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	-1	True	NA	-15	True	AGTAAA	-15	NA	38137160	38122714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_134245.known	chr3	+	2667	5	FSM	ENSG00000172936.16	ENST00000650905.2	2667	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	9.82344135219425	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	-3	True	NA	8	True	AATAAA	-20	NA	38138660	38143022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140569_38140756_38140849_38141131
transcript_134247.known	chr3	+	2691	5	FSM	ENSG00000172936.16	ENST00000421516.3	2691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.0742354282695	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	-3	True	NA	8	True	AATAAA	-20	NA	38138660	38143022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140593_38140756_38140849_38141131
transcript_134248.known	chr3	+	2839	4	FSM	ENSG00000172936.16	ENST00000652590.1	2839	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	3.85861230093008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTACCTTGGAAACTTG	-3	True	NA	-8	True	AATAAA	-4	NA	38138660	38143006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140849_38141131
transcript_134249.known	chr3	+	2483	4	FSM	ENSG00000172936.16	ENST00000651800.2	2483	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	73.8301353709235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	-3	True	NA	5	True	AATAAA	-17	NA	38138660	38143019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140756_38140849_38141131
transcript_134251.known	chr3	+	2638	4	FSM	ENSG00000172936.16	ENST00000417037.8	2638	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	63.9739530329857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	1110	False	NA	5	True	AATAAA	-17	NA	38138551	38143019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38140387_38140569_38140756_38140849_38141131
transcript_134252.known	chr3	+	2725	3	FSM	ENSG00000172936.16	ENST00000416282.3	2725	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	71.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACTTGTGTGTGTGTTG	-13	True	NA	3	True	AATAAA	-15	NA	38138650	38143017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38140387_38140849_38141131
transcript_134253.known	chr3	+	4517	18	FSM	ENSG00000172939.9	ENST00000311806.8	4517	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_7	30.6986694255349	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGTGTATGGACGCT	-11	True	NA	NA	False	AATAAA	-13	NA	38165536	38255484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38165947_38183002_38183116_38190730_38190840_38198721_38198864_38216095_38216152_38221577_38221688_38223811_38223914_38224570_38224705_38229686_38229736_38230364_38230431_38236838_38236962_38242742_38242779_38246074_38246222_38247667_38247733_38249965_38250019_38251402_38251472_38252327_38252393_38252816
transcript_13426.known	chr1	-	2128	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.4552440212044	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGATGGCCTTGTCTTT	-3	True	NA	-45	True	AATAAA	-15	NA	151372706	151364308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_134262.known	chr3	+	3667	19	FSM	ENSG00000093217.11	ENST00000207870.8	3667	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	4.92787485811926	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCTTAAACTTTATCT	-29	True	NA	NA	False	AATAAA	-27	NA	38346784	38414985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936_38363018_38365198_38365286_38365607_38365737_38366807_38366874_38368184_38368258_38370055_38370175_38372654_38372737_38374461_38374503_38375143_38375260_38376116_38376233_38376917_38376992_38379245_38379343_38395504_38395564_38397071_38397160_38400890_38400986_38412935
transcript_134267.known	chr3	+	11782	11	FSM	ENSG00000114739.14	ENST00000352511.5	11782	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	4.69148164229596	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	3	True	NA	9	True	AATAAA	-16	NA	38453889	38493142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38454375_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_134268.nnic	chr3	+	1850	11	NNC	ENSG00000114739.14	novel	11782	11	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0004999875006	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAAAAAAGTTGT	134	False	NA	-54	True	NA	NA	NA	38454363	38483374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_38454685_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_134269.known	chr3	+	1467	8	FSM	ENSG00000157036.13	ENST00000412107.5	1467	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.3853826643607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGCTAACATATTTTAG	NA	False	NA	NA	False	AATGAA	-15	NA	38496126	38524413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38496531_38496842_38496930_38497628_38497690_38498766_38498837_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_134271.known	chr3	+	3076	6	FSM	ENSG00000157036.13	ENST00000287675.10	3076	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	15.1973681932103	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATTGTTCTGCTCTTT	-9	True	NA	6	True	GATAAA	-17	NA	38496339	38526303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_134273.nic	chr3	-	2652	12	ISM	ENSG00000183873.18	ENST00000413689.6	8519	28	-51	55148	-51	10818	5prime_fragment	FALSE	canonical	3	17	junction_8	10.0181653192407	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAGAAAAAATGTCTA	NA	False	NA	NA	False	NA	NA	NA	38649738	38603209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034_38633360_38649530
transcript_134280.nic	chr3	-	1967	5	ISM	ENSG00000183873.18	ENST00000491944.1	1382	6	-65	5719	-51	-5719	5prime_fragment	FALSE	canonical	3	17	junction_1	15.1224171348366	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTTCTGAAGCAGAGGA	NA	False	NA	NA	False	AAAAAG	-13	NA	38649738	38619746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_38620972_38622399_38622490_38630310_38630430_38633034_38633360_38649530
transcript_134282.nic	chr3	-	738	2	ISM	ENSG00000183873.18	ENST00000491944.1	1382	6	-65	18802	-51	281	5prime_fragment	FALSE	canonical	3	55	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTTTGGTGTAATG	NA	False	NA	0	True	AATAAA	-22	NA	38649738	38632829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_38633360_38649530
transcript_134288.known	chr3	+	3965	19	FSM	ENSG00000114742.14	ENST00000302313.10	3965	19	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_8	38.5652005227255	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	6	True	NA	17	True	AATAAA	-17	NA	39052015	39096664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
transcript_134294.nic	chr3	+	1893	18	ISM	ENSG00000114742.14	ENST00000302313.10	3965	19	-20	2673	-17	-1087	5prime_fragment	TRUE	canonical	3	232	junction_8	39.6764596869126	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGGAGAACAGGAAAAAGA	-14	True	NA	NA	False	AATGAA	-4	NA	39051995	39093991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873
transcript_134301.known	chr3	-	2873	9	FSM	ENSG00000114745.14	ENST00000453680.5	2873	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	54.3298663259905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAACTAAAGCCTTTA	54	False	NA	-28	True	AATAAA	-20	NA	39107569	39096664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100455_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_134303.known	chr3	-	3046	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	23.35560692853	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-4	True	NA	1	True	AATACA	-25	NA	39107627	39096598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_134309.nnic	chr3	-	2903	9	NIC	ENSG00000114745.14	novel	2933	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	55.266965720944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAACTAAAGCCTTTA	-17	True	NA	-28	True	AATAAA	-20	NA	39107640	39096664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100455_39100787_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_134313.known	chr3	-	2933	9	FSM	ENSG00000114745.14	ENST00000452389.6	2933	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	52.1512224209558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAACTAAAGCCTTTA	2	True	NA	-28	True	AATAAA	-20	NA	39107621	39096664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100787_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_134316.known	chr3	-	3240	8	FSM	ENSG00000114745.14	ENST00000441302.6	3240	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	19.2428094176946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCTTTATTCTAT	-15	True	NA	-22	True	AATAAA	-26	NA	39107638	39096658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_134325.known	chr3	+	2426	7	FSM	ENSG00000168026.19	ENST00000479954.5	2426	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAATTCAAGAA	2	True	NA	NA	False	AAAAAG	-14	NA	39107716	39119657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39107865_39109084_39109215_39110028_39110140_39110850_39111018_39112457_39112581_39114584_39114743_39118068
transcript_134332.known	chr3	-	3164	5	FSM	ENSG00000144655.15	ENST00000273153.10	3164	5	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	21.9715725427198	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTATGTATTTGT	-1	True	NA	-4	True	AATAAA	-16	NA	39153591	39141854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39153437
transcript_134333.known	chr3	-	2593	5	FSM	ENSG00000144655.15	ENST00000514182.1	2593	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	16.4525833837729	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCTTCTGCCCCACCC	2	True	NA	NA	False	NA	NA	NA	39154562	39142337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154496
transcript_134334.nnic	chr3	-	3113	5	NNC	ENSG00000144655.15	novel	3164	5	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	23.6801604724292	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTATGTATTTGT	NA	False	NA	-4	True	AATAAA	-16	NA	39154678	39141854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154575
transcript_134348.known	chr3	+	2101	7	FSM	ENSG00000144659.13	ENST00000650617.1	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	17.4132771821453	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTTCAAAAAAGCAGC	-13	True	NA	54	True	NA	NA	NA	39383369	39397351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39383794_39389494_39389617_39390422_39390508_39391440_39391621_39391852_39392022_39394409_39394577_39396397
transcript_13435.nnic	chr1	-	1975	9	NIC	ENSG00000143416.21	novel	2128	10	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_7	105.879574871644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGATGGCCTTGTCTTTG	NA	False	NA	-44	True	AATAAA	-16	NA	151372731	151364307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_134354.known	chr3	+	1612	7	FSM	ENSG00000144659.13	ENST00000643672.1	1612	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.4971690926211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGCCCTTCTTTAATT	-13	True	NA	-94	True	NA	NA	NA	39384431	39397012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39384706_39389494_39389617_39390422_39390508_39391440_39391621_39391852_39392022_39394409_39394577_39396397
transcript_134360.nic	chr3	+	1834	6	NIC	ENSG00000144659.13	novel	2101	7	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	85.063740806527	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAGCTGTTTGGAAA	NA	False	NA	42	True	ATTAAA	-29	NA	39383308	39397203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_39383794_39389494_39389617_39390422_39390508_39391852_39392022_39394409_39394577_39396397
transcript_134369.known	chr3	+	1032	7	FSM	ENSG00000168028.14	ENST00000443003.2	1032	7	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	2058.34486501493	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	14	False	NA	2	True	AATAAA	-12	NA	39406734	39412434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39406765_39407620_39407787_39408605_39408740_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_134372.nic	chr3	+	1322	7	NIC	ENSG00000168028.14	novel	1140	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	1953.60960077038	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	3	False	NA	6	True	AATAAA	-16	NA	39406751	39412438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_39407083_39407620_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_134373.known	chr3	+	874	6	FSM	ENSG00000168028.14	ENST00000458478.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2107.98998100086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATGTATCAGGATAGAG	12	False	NA	NA	False	NA	NA	NA	39406732	39412059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39406765_39407602_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895
transcript_134379.known	chr3	+	5073	17	FSM	ENSG00000170011.14	ENST00000302541.11	5073	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	6.25468574350462	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTGTGTGCAATTTT	-23	True	NA	NA	False	AATAAA	-1	NA	39809608	40260321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39809917_39900786_39900927_40044049_40044272_40151047_40151185_40162729_40162811_40166845_40166944_40167158_40167240_40169949_40170094_40182219_40182374_40189825_40190464_40209853_40210094_40233858_40234054_40244445_40244608_40250221_40250327_40250438_40250500_40251880_40252000_40258133
transcript_134380.known	chr3	-	1958	3	FSM	ENSG00000280739.4	ENST00000625390.2	1958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGGTCCTGTGTTATT	824	False	NA	NA	False	TATAAA	-17	NA	40309542	40173144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40174723_40301236_40301397_40309322
transcript_134382.nic	chr3	-	721	2	ISM	ENSG00000280739.4	ENST00000663881.1	1377	3	26	1818	7	-1818	5prime_fragment	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCATTCCACTAAGGTCA	833	False	NA	NA	False	AAAAAG	-18	NA	40309533	40300886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_40301397_40309322
transcript_134383.known	chr3	-	553	3	FSM	ENSG00000280739.4	ENST00000629217.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGAACGTGTTCCT	-10	True	NA	NA	False	AAAAAG	-45	NA	40309512	40232856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40233060_40301236_40301397_40309322
transcript_134384.known	chr3	-	2446	3	FSM	ENSG00000280739.4	ENST00000629723.2	2446	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTGATGTTGGGCTG	-6	True	NA	NA	False	ATTAAA	-15	NA	40309508	40289127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40291228_40301236_40301397_40309322
transcript_134385.known	chr3	+	987	4	FSM	ENSG00000114784.4	ENST00000232905.4	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_2	64.9461315245181	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	10	True	NA	73	True	AGTAAA	-23	NA	40309706	40312424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40309973_40310892_40311057_40311469_40311572_40311969
transcript_134389.known	chr3	+	637	3	FSM	ENSG00000114784.4	ENST00000488260.1	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_2	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAAAGTATTCAAATAC	24	False	NA	NA	False	NA	NA	NA	40309825	40311795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40309973_40310892_40311057_40311469
transcript_134392.known	chr3	+	873	2	FSM	ENSG00000114784.4	ENST00000462088.1	873	2	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTATTCAGCTTCAAGG	-6	True	NA	NA	False	NA	NA	NA	40309721	40311514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40309973_40310892
transcript_134393.known	chr3	-	2201	3	FSM	ENSG00000223797.7	ENST00000420850.2	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	9	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATAAAACAGAATAATAA	-14	True	NA	NA	False	CATAAA	-9	NA	40453329	40444932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40446848_40451704_40451783_40453121
transcript_134394.known	chr3	+	7072	6	FSM	ENSG00000188846.14	ENST00000338970.10	7072	6	0	0	0	0	multi-exon	FALSE	canonical	3	2270	junction_1	763.010615915663	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTCATATTGTGAT	NA	False	NA	13	True	AATAAA	-21	NA	40457291	40468587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457364_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_134397.known	chr3	+	7136	6	FSM	ENSG00000188846.14	ENST00000396203.7	7136	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	1575.98071054185	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTCATATTGTGAT	2	True	NA	13	True	AATAAA	-21	NA	40457338	40468587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_134399.known	chr3	+	966	6	FSM	ENSG00000188846.14	ENST00000435633.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1641.75471980439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGTCAAAAAGCTCCAG	26	False	NA	NA	False	NA	NA	NA	40457362	40462168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457748_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_134403.known	chr3	+	812	6	FSM	ENSG00000188846.14	ENST00000416518.1	812	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1988.92326649371	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTAAGCCTTTGGATT	17	False	NA	7	True	AATAAA	-25	NA	40457353	40462280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461940
transcript_134404.known	chr3	+	794	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	3747	junction_3	246.360888738452	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	540	False	NA	14	True	AATAAA	-14	NA	40457876	40462368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_134405.known	chr3	+	4841	5	FSM	ENSG00000177873.14	ENST00000432264.4	4841	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.60977222864644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTGTGATATTCTGT	-19	True	NA	NA	False	AATAAA	-21	NA	40477121	40491053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40486805
transcript_134408.known	chr3	+	3291	5	FSM	ENSG00000177842.12	ENST00000314529.10	3291	5	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	11.5190060335083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACCTATTATTAT	4	True	NA	NA	False	NA	NA	NA	40506038	40518736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401_40512516_40515859
transcript_134411.known	chr3	+	2192	4	FSM	ENSG00000177873.14	ENST00000520737.5	2192	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	7.58653778449403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACTAGGAGAAATGCAA	1	True	NA	NA	False	NA	NA	NA	40477141	40488578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40477358_40477917_40478004_40482587_40482705_40486805
transcript_134416.known	chr3	+	2022	3	FSM	ENSG00000177842.12	ENST00000418905.1	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	5	True	NA	6	True	AATAAA	-21	NA	40506039	40517709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40506139_40506303_40506377_40515859
transcript_134421.known	chr3	+	8389	5	FSM	ENSG00000172888.12	ENST00000339296.10	8389	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.69966214673719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTTAAGAGACAAAG	-4	True	NA	NA	False	CATAAA	-16	NA	40524959	40539782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40525275_40525778_40525865_40529318_40529446_40530208_40530317_40532029
transcript_134422.known	chr3	+	1979	5	FSM	ENSG00000172888.12	ENST00000403205.6	1979	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.5524865872714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACATTTAAAGACCGTG	NA	False	NA	NA	False	CATAAA	-15	NA	40524877	40533526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40525039_40525778_40525865_40529318_40529446_40530208_40530317_40532029
transcript_134423.known	chr3	+	536	5	FSM	ENSG00000172888.12	ENST00000462161.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.8483869768736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAAGCTTATTCGGCAT	1	True	NA	NA	False	AATGAA	-42	NA	40525005	40532257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40525039_40525778_40525865_40529494_40529576_40530208_40530317_40532029
transcript_134424.known	chr3	+	2613	4	FSM	ENSG00000172888.12	ENST00000431278.5	2613	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	6.54896090146283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAATCTGTTGTGCA	3	True	NA	134	True	AGTAAA	-21	NA	40524897	40534071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40525275_40525778_40525865_40530208_40530317_40532029
transcript_134425.known	chr3	-	4294	37	FSM	ENSG00000168038.11	ENST00000301831.9	4294	37	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_5	9.1000949662661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCAGCCTGCCAGCATC	29	False	41962132	-10	True	AATAAA	-20	NA	41962103	41246598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_41246993_41249488_41249575_41398078_41398265_41455496_41455596_41463086_41463254_41566024_41566131_41615668_41615718_41663606_41663700_41681507_41681653_41681752_41681805_41705056_41705152_41705253_41705306_41715236_41715294_41715446_41715569_41717727_41717862_41754360_41754489_41789660_41789844_41800131_41800294_41819422_41819507_41835863_41835972_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_134434.known	chr3	-	647	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGAATTTGGCTGT	2	True	NA	43	True	NA	NA	NA	41962130	41937094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
transcript_134435.known	chr3	+	3052	17	FSM	ENSG00000168036.18	ENST00000453024.6	3052	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	315.683979637865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAATGGTACTGACTTT	115	False	NA	NA	False	NA	NA	NA	41199444	41239947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_134436.known	chr3	+	2770	17	FSM	ENSG00000168036.18	ENST00000646116.1	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	310.28573021491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	20	False	NA	NA	False	NA	NA	NA	41199524	41239904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_134438.known	chr3	+	3472	16	FSM	ENSG00000168036.18	ENST00000396185.8	3472	16	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_15	146.643998248214	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	59	False	NA	30	True	ATTAAA	-15	NA	41199388	41240443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_134439.known	chr3	+	2778	16	FSM	ENSG00000168036.18	ENST00000645982.1	2778	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	232.685156858409	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACTTTGCTTGCTT	112	False	NA	NA	False	NA	NA	NA	41199441	41239955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239812
transcript_134440.known	chr3	+	3086	15	FSM	ENSG00000168036.18	ENST00000644873.1	3086	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	240.669728813881	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	33	False	NA	NA	False	NA	NA	NA	41199537	41239904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235726_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_134441.known	chr3	+	2777	13	FSM	ENSG00000168036.18	ENST00000644138.1	2777	13	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_8	33.2001506020681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGTACACAGACATACA	0	True	NA	NA	False	AATAAA	-42	NA	41199504	41237196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587
transcript_134447.nnic	chr3	+	4457	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	-251	-23	at_least_one_novel_splicesite	TRUE	canonical	3	47	junction_1	38.5388751517112	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGTCATAGTGTGTCT	7220	False	NA	13	True	AATAAA	-18	NA	42159917	42225125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209923_42219493_42219597_42222941
transcript_134448.nnic	chr3	+	4865	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	-13	-118	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	38.5388751517112	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGGTATTCTGATTT	7458	False	NA	17	True	AATAAA	-21	NA	42160155	42225771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209923_42219493_42219597_42222941
transcript_134449.known	chr3	+	5033	15	FSM	ENSG00000182606.17	ENST00000396175.5	5033	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	51.7275535466193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTGTTACATGCCTTC	0	True	NA	135	True	ATTAAA	-18	NA	42160168	42225889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209986_42219493_42219597_42222941
transcript_13445.known	chr1	+	918	7	FSM	ENSG00000159377.11	ENST00000290541.7	918	7	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_6	93.8499097258786	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	4	True	NA	14	True	AATAAA	-14	NA	151399572	151401937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151399728_151399980_151400188_151400441_151400589_151400763_151400846_151401238_151401356_151401541_151401631_151401816
transcript_134452.nnic	chr3	+	5053	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	0	-118	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	51.7275535466193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGGTATTCTGATTT	0	True	NA	17	True	AATAAA	-21	NA	42160168	42225771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42210124_42219493_42219597_42222941
transcript_134453.known	chr3	+	4620	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	38.508566867935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTATAGTTTTACTTT	0	True	NA	NA	False	ATTAAA	-20	NA	42160168	42212623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
transcript_134457.known	chr3	-	830	3	FSM	ENSG00000187094.12	ENST00000334681.9	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCGTTCCCTGCGTCTA	-6	True	NA	-4	True	ATTAAA	-16	NA	42264903	42257824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42258232_42263416_42263633_42264696
transcript_134459.known	chr3	+	2754	13	FSM	ENSG00000114812.13	ENST00000325123.5	2754	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	3.56974166510065	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGGTTCCCCTGGTG	22	True	NA	10	True	AATAAA	-13	NA	42502642	42537568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42502814_42513748_42513855_42519222_42519331_42525886_42525994_42527392_42527497_42527990_42528124_42530778_42530933_42531470_42531532_42531802_42531870_42532241_42532334_42534974_42535105_42535342_42535385_42536089
transcript_134489.nic	chr3	-	1809	8	NIC	ENSG00000093183.14	novel	1446	8	NA	NA	10	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_6	69.996792929449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	309	False	NA	-24	True	AATAAA	-16	NA	42582013	42547970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563981_42568864_42569074_42581845
transcript_134494.nic	chr3	-	1666	8	NIC	ENSG00000093183.14	novel	6340	7	NA	NA	10	3026	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	74.3485997562448	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACTGGTTTTAGTCATT	309	False	NA	-21	True	AGTAAA	-14	NA	42582013	42552904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563981_42568864_42569074_42581845
transcript_134496.known	chr3	-	1608	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	31.7144376515737	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	294	False	NA	-24	True	AATAAA	-16	NA	42582028	42547970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_134497.known	chr3	-	6340	7	FSM	ENSG00000093183.14	ENST00000264454.8	6340	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	48.7054639873415	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-1	True	NA	-22	True	AATAAA	-18	NA	42581967	42547968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_134500.known	chr3	+	646	6	FSM	ENSG00000114857.19	ENST00000442970.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	24.5796663931795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGTTTGTATGTTTTCT	10	True	NA	NA	False	AATAAA	-19	NA	42600742	42620316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42620015
transcript_134502.known	chr3	+	5498	6	FSM	ENSG00000114853.15	ENST00000680014.1	5498	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.46969384566991	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGCCCAGCCTCTTC	-3	True	NA	4	True	AATAAA	-17	NA	42654504	42667580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42654696_42658274_42659829_42661484_42661633_42663011_42663128_42663796_42663942_42664236
transcript_134504.known	chr3	-	1458	6	FSM	ENSG00000093183.14	ENST00000423701.6	1458	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	72.6652599252215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	24	True	NA	-22	True	AATAAA	-18	NA	42581942	42547968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42548658_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_134513.nnic	chr3	+	963	4	Fusion	ENSG00000289558.1_ENSG00000008324.12	novel	2697	3	NA	NA	-57	-120	multi-exon	FALSE	canonical	3	21	junction_1	517.778803050964	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATGTGGAGGTATAGA	NA	False	NA	17	True	AATAAA	-19	NA	42582080	42594994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr3_+_42582236_42590808_42590967_42591524_42591602_42594421
transcript_134516.known	chr3	+	2134	2	FSM	ENSG00000114857.19	ENST00000459950.1	2134	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGATTGCTGAAGAGTA	40	False	NA	NA	False	AAAAAG	-16	NA	42600717	42603056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42600779_42600983
transcript_134521.known	chr3	-	585	4	FSM	ENSG00000181061.14	ENST00000452906.3	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	1690.68197942592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGGAGGAGCTTGC	2	True	NA	-117	True	NA	NA	NA	42804433	42785251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804171
transcript_134522.known	chr3	-	2722	4	FSM	ENSG00000181061.14	ENST00000321331.12	2722	4	0	0	0	0	multi-exon	FALSE	canonical	3	2649	junction_3	473.663969028208	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAAGTCATGTGACATT	1	True	NA	-10	True	ATTAAA	-17	NA	42804490	42782907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804435
transcript_134523.known	chr3	-	1322	4	FSM	ENSG00000181061.14	ENST00000418900.6	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1694.91992600109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATTAAAGTAAGTG	3	True	NA	-33	True	NA	NA	NA	42804488	42784329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794300_42804435
transcript_134526.known	chr3	-	983	3	FSM	ENSG00000181061.14	ENST00000470543.1	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTTTCCATAAGAAT	3	True	NA	NA	False	AATGAA	-23	NA	42804488	42784525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42804435
transcript_134528.known	chr3	-	741	4	FSM	ENSG00000181061.14	ENST00000430190.5	741	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1504.08384813554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATAAGAGTCCTATTTG	1	True	NA	NA	False	NA	NA	NA	42804490	42784904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785337_42786027_42786163_42794156_42794276_42804435
transcript_13453.known	chr1	-	6655	19	FSM	ENSG00000143442.22	ENST00000271715.7	6655	19	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_18	17.7434564533966	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTGAGACTGAATG	-22	True	NA	-7	True	AATAAA	-20	NA	151459494	151402723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_134531.known	chr3	+	3389	5	FSM	ENSG00000144649.10	ENST00000430121.3	3389	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.69966214673719	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTTAACTTTGTTT	-21	True	NA	7	True	TATAAA	-21	NA	42979310	43057715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42979646_43032266_43033554_43053520_43053644_43055431_43055536_43056175
transcript_134539.known	chr3	+	783	4	FSM	ENSG00000144649.10	ENST00000488863.5	783	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	7.76029781788188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGACGAGGACCCATAA	NA	False	NA	NA	False	NA	NA	NA	42979280	43056366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42979646_43053520_43053644_43055431_43055536_43056175
transcript_13454.known	chr1	-	4813	19	FSM	ENSG00000143442.22	ENST00000409503.5	4813	19	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	31.3443637007113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGTCCCACTGAAC	3	True	NA	-24	True	TATAAA	-11	NA	151459179	151404223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428015_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_134543.nic	chr3	+	1988	2	ISM	ENSG00000144649.10	ENST00000692251.1	4535	3	-264	22778	-19	475	5prime_fragment	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATAACTACTCAGAATG	NA	False	NA	NA	False	AATAAA	-17	NA	42979247	43033856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_42979646_43032266
transcript_134545.known	chr3	-	2531	3	FSM	ENSG00000144647.7	ENST00000441964.1	2531	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCAAGTCTTCTTATTG	138	False	NA	-6	True	ATTAAA	-15	NA	43105939	43079231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43081537_43090487_43090610_43105835
transcript_134548.known	chr3	-	2547	2	FSM	ENSG00000144647.7	ENST00000344697.3	2547	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTCAAGTCTTCTTAT	-2	True	NA	-8	True	ATTAAA	-13	NA	43106079	43079233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43081537_43105835
transcript_134549.known	chr3	+	5188	7	FSM	ENSG00000163788.14	ENST00000296088.12	5188	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.36545993132812	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCTGTGTTGTATTG	-28	True	NA	NA	False	AATAAA	-29	NA	43286539	43351143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_43286676_43299753_43299816_43303097_43303793_43332168_43332311_43340286_43340500_43343343_43343479_43347338
transcript_134555.known	chr3	-	3155	13	FSM	ENSG00000160746.13	ENST00000292246.8	3155	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	21.6275287538822	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGAAGGTGAGAAGG	5521	False	43622038	NA	False	NA	NA	NA	43622011	43365847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_134559.known	chr3	-	2419	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_10	78.5843758786147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGGCAACCTCTCTGA	-11	True	NA	-45	True	CATAAA	-17	NA	43621984	43366358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
transcript_134561.known	chr3	-	2039	12	FSM	ENSG00000160746.13	ENST00000350459.8	2039	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	81.1643572793008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	8	True	NA	-34	True	ATTAAA	-6	NA	43621965	43366347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_134563.nic	chr3	-	2580	12	ISM	ENSG00000160746.13	ENST00000292246.8	3155	13	-59	66270	-4	-65229	5prime_fragment	FALSE	canonical	3	245	junction_11	20.4454525243542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCTGGAGTTGACCAT	5462	False	NA	NA	False	NA	NA	NA	43622070	43432117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_13457.known	chr1	-	4415	18	FSM	ENSG00000143442.22	ENST00000531094.5	4415	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	39.8257450074437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAGAAAAAGAAAAA	257	False	NA	38	True	TTTAAA	-32	NA	151459215	151404498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428015_151428122_151428414_151429602_151429712_151430665_151430842_151442080_151442206_151459151
transcript_134576.known	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	17.7200451466693	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	1	True	NA	2	True	AATAAA	-13	NA	43690937	43722725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_134578.known	chr3	+	618	2	FSM	ENSG00000011198.10	ENST00000486764.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATACT	-7	True	NA	NA	False	AATAAA	-14	NA	43690891	43699745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_43691040_43699275
transcript_134579.known	chr3	-	1069	1	FSM	ENSG00000272121.1	ENST00000606217.1	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTCTACACTGGATT	NA	False	NA	2	True	ATTAAA	-19	NA	43999149	43998080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43998100_43999100
transcript_134583.known	chr3	+	1998	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	20.757863302587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGTTCTGTGAATC	NA	False	NA	11	True	AATAAA	-23	NA	44338118	44359804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
transcript_134584.known	chr3	+	2178	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	22.2910046630673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTGAGTTCTGTGAA	7	False	NA	9	True	AATAAA	-21	NA	44338451	44359802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
transcript_134585.known	chr3	+	1844	11	FSM	ENSG00000179152.20	ENST00000417237.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	16.7764716195033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTGCTTTAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	44338118	44407790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_134587.known	chr3	-	877	2	FSM	ENSG00000185219.18	ENST00000474600.1	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCAACTTCTGGGCAC	17	True	NA	NA	False	CATAAA	-1	NA	44477649	44454878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44455697_44477590
transcript_134590.nnic	chr3	-	1691	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	6	3081	at_least_one_novel_splicesite	TRUE	canonical	3	33	junction_2	2.35702260395516	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-10	True	NA	-8	True	AATAAA	-19	NA	44510630	44491765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44510552
transcript_134592.known	chr3	-	1326	3	FSM	ENSG00000178917.17	ENST00000489411.1	1326	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	-16	True	NA	NA	False	TATAAA	-19	NA	44510636	44499522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44500638_44502541_44502669_44510552
transcript_134594.known	chr3	+	3455	6	FSM	ENSG00000196345.13	ENST00000426540.6	3455	6	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_5	11.5861986863682	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCACATTGAATTATCC	-18	True	NA	11	True	AATAAA	-18	NA	44555192	44572158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44555482_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44569921
transcript_134595.known	chr3	+	3477	6	FSM	ENSG00000196345.13	ENST00000273320.7	3477	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	11.9899958298575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCACATTGAATTATCC	-3	True	NA	11	True	AATAAA	-18	NA	44555207	44572158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44555519_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44569921
transcript_134596.known	chr3	+	2935	6	FSM	ENSG00000186448.15	ENST00000383745.6	2935	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	19.1039262980153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	10	True	NA	9	True	AATAAA	-19	NA	44625048	44648471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44625144_44629064_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
transcript_134598.known	chr3	+	7530	6	FSM	ENSG00000186448.15	ENST00000344387.9	7530	6	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	9.71596624119289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	-3	True	NA	9	True	AATAAA	-19	NA	44625035	44648471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
transcript_134599.known	chr3	+	620	4	FSM	ENSG00000169981.11	ENST00000415571.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	10.5303793326209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTCATCATATCAGAAAG	-7	True	NA	NA	False	NA	NA	NA	44648740	44658765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648835_44650943_44651260_44652556_44652702_44658700
transcript_134602.nic	chr3	+	2623	4	NIC	ENSG00000169981.11	novel	620	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	10.5303793326209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	-7	True	NA	23	True	AATAAA	-23	NA	44648740	44660791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_44648812_44650943_44651260_44652556_44652702_44658700
transcript_134604.known	chr3	+	2503	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	12.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	-6	True	NA	23	True	AATAAA	-23	NA	44648741	44660791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648835_44650940_44651260_44658700
transcript_134606.known	chr3	+	581	3	FSM	ENSG00000169981.11	ENST00000453164.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAATGACTGTCACTTA	-3	True	NA	NA	False	AATAAA	-30	NA	44648744	44658895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648812_44650940_44651260_44658700
transcript_134608.known	chr3	+	3154	3	FSM	ENSG00000196653.12	ENST00000436624.7	3154	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	3	True	NA	20	True	ATTAAA	-22	NA	44712659	44723831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44712741_44720202_44720317_44720872
transcript_134609.known	chr3	+	3353	3	FSM	ENSG00000186446.12	ENST00000620116.5	3353	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	0	True	NA	7	True	AATAAA	-19	NA	44729634	44737083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44730016_44731475_44731561_44734196
transcript_134611.known	chr3	+	3099	3	FSM	ENSG00000186446.12	ENST00000396048.6	3099	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	NA	False	NA	7	True	AATAAA	-19	NA	44729595	44737083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44729723_44731475_44731561_44734196
transcript_134612.known	chr3	-	5079	3	FSM	ENSG00000163807.6	ENST00000296121.6	5079	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	27	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-4	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44753553_44754223_44754369_44761494
transcript_134619.known	chr3	+	4760	35	FSM	ENSG00000163808.17	ENST00000326047.9	4760	35	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_21	24.0970679776837	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	6	True	NA	10	True	AATAAA	-21	NA	44761793	44853256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
transcript_134630.nic	chr3	+	2773	21	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-26	27092	-26	-1326	5prime_fragment	FALSE	canonical	3	136	junction_14	17.9311879137998	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTCTGAAATCTGATC	-20	True	NA	20	True	AAAAAG	-5	NA	44761767	44826164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038
transcript_134633.nic	chr3	+	1063	4	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-26	74423	-26	-34437	5prime_fragment	FALSE	canonical	3	167	junction_1	16.5730705262081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGATGTGGTAGTGGT	-20	True	NA	NA	False	AATACA	-8	NA	44761767	44778833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114
transcript_134635.nnic	chr3	+	1191	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	40.8275506109403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	4	False	NA	22	True	AATAAA	-22	NA	44861867	44865664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_44862117_44862357_44862528_44864196_44864344_44865039
transcript_134638.nnic	chr3	+	1069	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	37.6327280730778	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	-13	True	NA	22	True	AATAAA	-22	NA	44861888	44865664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865039
transcript_134639.known	chr3	+	977	3	FSM	ENSG00000169964.8	ENST00000302392.5	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	34.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	10	True	NA	22	True	AATAAA	-22	NA	44861911	44865664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44862117_44864196_44864344_44865039
transcript_134643.known	chr3	+	1395	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	315.831343441401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAATAAAGTTTAGA	5	True	NA	-22	True	AAAACA	-30	NA	44976263	45012633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_134646.known	chr3	+	1042	8	FSM	ENSG00000075914.13	ENST00000265564.8	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_3	84.9196498978623	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	-15	True	NA	8	True	ATTAAA	-16	NA	44976243	45011471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_13465.known	chr1	-	649	4	FSM	ENSG00000143442.22	ENST00000467287.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	40.2326567189723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCACCCTTCATCAAGTA	-5	True	NA	NA	False	NA	NA	NA	151459187	151429399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151429712_151430665_151430842_151442080_151442206_151459151
transcript_134651.known	chr3	-	3101	8	FSM	ENSG00000163812.15	ENST00000296127.7	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	90.9186673991247	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGAATGCTGTT	-26	True	NA	NA	False	NA	NA	NA	44976182	44924845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44926848_44929305_44929437_44932906_44932991_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_134652.known	chr3	-	1336	8	FSM	ENSG00000163812.15	ENST00000342790.8	1336	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	102.116779887998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAATCGAAAAAGCAAAAC	-10	True	NA	-85	True	NA	NA	NA	44976166	44926612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44958587_44958686_44959126_44959461_44975932
transcript_134659.known	chr3	-	3902	7	FSM	ENSG00000163812.15	ENST00000339420.7	3902	7	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_1	74.1861397656822	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-26	True	NA	-1	True	AATAAA	-25	NA	44976182	44915256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44918144_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_13466.known	chr1	-	397	3	FSM	ENSG00000143442.22	ENST00000476128.1	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGTACAGATGTGGTTC	3	True	NA	NA	False	AATAAA	-31	NA	151459179	151440842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151441087_151442080_151442206_151459151
transcript_134660.known	chr3	-	12594	7	FSM	ENSG00000163812.15	ENST00000424952.7	12594	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	26.5920831994955	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGAGTCTCCTGTTT	-18	True	NA	-5	True	AATAAA	-21	NA	44976174	44915260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_134664.nic	chr3	+	860	6	ISM	ENSG00000075914.13	ENST00000468667.5	831	7	-23	783	-16	0	5prime_fragment	FALSE	canonical	3	55	junction_1	402.19428141136	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGGTATGTCTAGAG	943	False	NA	7	True	ATTAAA	-15	NA	44976227	45011470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_44976335_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_13467.known	chr1	+	5101	21	FSM	ENSG00000143375.15	ENST00000271636.12	5101	21	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_11	56.2222375933224	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTGTCTTCTCAT	-1	True	NA	28	True	ATTAAA	-28	NA	151511386	151538692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151511516_151518505_151519393_151520165_151520267_151520413_151520484_151520595_151520692_151523433_151523562_151524225_151524359_151524673_151524887_151525641_151525791_151526974_151527108_151529349_151529560_151529908_151530116_151530488_151530747_151532401_151532573_151533974_151534137_151535041_151535132_151535599_151535684_151535779_151535899_151536236_151536346_151536729_151536894_151537204
transcript_134670.known	chr3	-	5963	9	FSM	ENSG00000163814.8	ENST00000296129.6	5963	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	25.4014640326104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTTTCAAGTCTCC	5	True	NA	-8	True	AATAAA	-25	NA	45146378	45082276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45086068_45089053_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
transcript_134676.nic	chr3	-	2218	8	ISM	ENSG00000163814.8	ENST00000296129.6	5963	9	-49	6780	-5	-6780	5prime_fragment	FALSE	canonical	3	86	junction_1	23.796758482737	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGGTGGAATCTCTTA	20	False	NA	NA	False	NA	NA	NA	45146427	45089056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
transcript_134679.known	chr3	-	1416	4	FSM	ENSG00000163814.8	ENST00000425231.2	1416	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	10.9848380355227	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTGAAAGGTCATTTTT	25	False	NA	3	True	AATAAA	-42	NA	45146422	45110215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45110842_45112082_45112446_45118411_45118622_45146205
transcript_134682.known	chr3	+	4781	22	FSM	ENSG00000011376.12	ENST00000645846.2	4781	22	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_5	21.1783271754431	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTACAAGGAAGGAGTG	3	True	NA	NA	False	ATTAAA	-19	NA	45388575	45549407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_134685.known	chr3	+	4139	22	FSM	ENSG00000011376.12	ENST00000642274.1	4139	22	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	42.3951287151662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTAATCCTGGTTTTATG	217	False	NA	NA	False	NA	NA	NA	45388835	45548599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45389107_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_134686.nnic	chr3	+	4092	21	NIC	ENSG00000011376.12	novel	4781	22	NA	NA	0	160	combination_of_known_splicesites	FALSE	canonical	1	4	junction_20	47.665789618971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCAGGACATATGTGT	-9	True	NA	21	True	AATAAA	-15	NA	45388563	45548834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45547350
transcript_134688.nnic	chr3	+	4136	21	NIC	ENSG00000011376.12	novel	4781	22	NA	NA	-3	160	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	47.2288047699706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCAGGACATATGTGT	-3	True	NA	21	True	AATAAA	-15	NA	45388569	45548834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45523996_45524109_45541828_45541957_45547350
transcript_134691.known	chr3	+	10049	21	FSM	ENSG00000011376.12	ENST00000650792.2	10049	21	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	42.2570704143106	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATGGTATATTGAGTG	-12	True	NA	14	True	AATAAA	-28	NA	45388560	45554726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45388681_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_134696.known	chr3	+	11442	8	FSM	ENSG00000144791.10	ENST00000273317.5	11442	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	12.1032969028429	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTTCTAACTC	4	True	NA	NA	False	AATAAA	-22	NA	45594750	45686341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45596288_45636149_45636252_45665649_45665718_45668293_45668357_45672689_45672821_45673453_45673506_45674342_45674412_45676921
transcript_134701.known	chr3	+	2164	21	FSM	ENSG00000211456.13	ENST00000418611.5	2164	21	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_2	159.920441157471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGATGACAGAATTGATC	NA	False	NA	NA	False	NA	NA	NA	45689240	45743804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45689498_45690347_45690388_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_134705.known	chr3	+	1830	20	FSM	ENSG00000211456.13	ENST00000672858.2	1830	20	0	0	0	0	multi-exon	FALSE	canonical	2	340	junction_16	73.8155971476995	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTTTCCACATCAGCCC	23	False	NA	NA	False	NA	NA	NA	45689465	45743735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_134708.known	chr3	+	2013	19	FSM	ENSG00000211456.13	ENST00000441228.5	2013	19	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_3	131.039917111326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTCATTGTATTCTAT	-18	True	NA	27	True	ATTAAA	-37	NA	45689354	45743935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_134710.known	chr3	+	854	4	FSM	ENSG00000211456.13	ENST00000463347.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	9.84321537348893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATGAAATGTGTATATA	-17	True	NA	NA	False	NA	NA	NA	45689355	45707318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779
transcript_134712.known	chr3	-	1384	2	FSM	ENSG00000230530.2	ENST00000655322.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTTTTCTTTCTA	NA	False	NA	0	True	TTTAAA	-24	NA	45689200	45679512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45680072_45688375
transcript_134716.known	chr3	-	4026	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	6.58280588604383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTTGGAAAATCCTTT	-14	True	NA	NA	False	ATTAAA	-25	NA	45842119	45823315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
transcript_134722.known	chr3	-	986	9	FSM	ENSG00000163818.19	ENST00000411866.5	986	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	14.456832294801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTTGTCATATCCCCT	-24	True	NA	NA	False	NA	NA	NA	45842129	45826240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45841988
transcript_134725.known	chr3	-	8514	18	FSM	ENSG00000163820.16	ENST00000296137.7	8514	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	6.65304259557586	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCTCTCATTTTT	2	True	NA	-3	True	AATAAA	-20	NA	45995824	45917902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45921841_45923655_45923766_45931070_45931282_45936447_45936544_45955248_45955394_45958407_45958620_45959392_45959543_45962224_45962393_45964335_45964455_45965032_45965126_45966276_45968704_45969674_45969766_45973087_45973232_45975238_45975346_45979704_45979831_45981569_45981677_45984855_45985023_45995721
transcript_134728.known	chr3	-	2721	17	FSM	ENSG00000012223.13	ENST00000231751.9	2721	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.78535710713571	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTATTCCAAAGCTA	0	True	NA	NA	False	TATAAA	-2	NA	46464905	46435644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46436230_46437939_46438130_46439295_46439481_46441415_46441484_46443440_46443583_46445280_46445437_46446439_46446494_46447307_46447399_46448862_46449018_46449853_46450029_46450494_46450674_46454304_46454361_46455294_46455443_46455795_46455979_46456289_46456399_46459655_46459820_46464824
transcript_134730.known	chr3	-	4890	9	FSM	ENSG00000163827.14	ENST00000395905.8	4890	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	8.8175960442742	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTCTAAAAGCTT	-4	True	NA	NA	False	AATAAA	-19	NA	46566302	46515384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
transcript_134731.known	chr3	-	1963	9	FSM	ENSG00000163827.14	ENST00000296144.3	1963	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	14.764293921485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGATTGTGAAAAGAGCAT	NA	False	NA	NA	False	AAAAAG	-16	NA	46580099	46518348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46579936
transcript_134740.known	chr3	+	1192	6	FSM	ENSG00000241186.10	ENST00000542931.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	2	143	junction_1	2597.31738530354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGATTGAATTATAT	-1	True	NA	NA	False	NA	NA	NA	46574533	46581860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46574584_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_134746.known	chr3	+	1956	6	FSM	ENSG00000241186.10	ENST00000296145.6	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	6013	junction_4	380.453623980637	4365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGTGAACTGGTTAT	-6	True	NA	22	True	AGTAAA	-18	NA	46577787	46582457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_134761.known	chr3	+	643	4	FSM	ENSG00000241186.10	ENST00000493282.5	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6300	junction_2	306.411850655653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCATTCTCAGGAACTG	10	False	NA	NA	False	NA	NA	NA	46577747	46579936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738
transcript_134767.known	chr3	+	704	3	FSM	ENSG00000241186.10	ENST00000471721.1	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	6300	junction_2	93.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAACACATTGGTGTTGT	27	False	NA	NA	False	NA	NA	NA	46577764	46579642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46578005_46579094_46579148_46579231
transcript_134771.known	chr3	-	561	2	FSM	ENSG00000163827.14	ENST00000469912.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGGGCTACTCTGTT	10	True	NA	NA	False	NA	NA	NA	46566234	46551107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46551611_46566176
transcript_134778.known	chr3	-	4913	26	FSM	ENSG00000178038.17	ENST00000318962.9	4913	26	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	3.02099321415987	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGGGCTGCAGTGTTT	12	True	NA	NA	False	AATAAA	-41	NA	46693679	46668994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46671065_46671487_46671585_46671883_46672034_46672139_46672202_46673338_46673382_46674565_46674740_46675617_46675687_46676244_46676403_46676641_46676739_46676848_46677023_46678258_46678390_46679209_46679288_46680429_46680542_46681245_46681408_46681499_46681599_46682028_46682095_46683129_46683327_46683781_46683849_46683988_46684048_46685524_46685645_46686307_46686440_46686982_46687149_46687618_46687685_46688097_46688297_46689337_46689466_46693642
transcript_13479.known	chr1	+	3033	12	FSM	ENSG00000143367.17	ENST00000368848.6	3033	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	13.7034712378631	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	0	True	NA	27	True	AATAAA	-23	NA	151540307	151583583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151540427_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_134796.known	chr3	+	1634	4	FSM	ENSG00000181585.7	ENST00000644830.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.82842712474619	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTGTGAATAAAGCTGA	735	False	NA	NA	False	NA	NA	NA	46694527	46710853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46694619_46705789_46705908_46709125_46709276_46709578
transcript_134805.nnic	chr3	-	2198	8	NIC	ENSG00000206549.13	novel	2960	11	NA	NA	-16	-2	combination_of_known_splicesites	TRUE	canonical	2	6	junction_7	7.62380803664362	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCTTCCCCGGCCTC	NA	False	NA	-2	True	ATTAAA	-18	NA	46812590	46712116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_46712483_46712900_46713068_46714217_46714502_46715534_46715698_46717436_46717638_46717718_46718307_46719943_46720004_46812221
transcript_134809.known	chr3	-	328	2	FSM	ENSG00000226074.5	ENST00000522832.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTGGAGTTTACACAG	NA	False	NA	NA	False	NA	NA	NA	46811341	46809497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46809590_46811105
transcript_134810.known	chr3	+	2123	14	FSM	ENSG00000160801.14	ENST00000313049.9	2123	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.09253392442084	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGCGGTGTGTGGCTTC	-7	True	NA	6	True	AAAAAG	-22	NA	46883356	46903794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46883635_46893906_46894010_46895734_46895870_46897854_46897966_46898073_46898193_46898377_46898473_46898661_46898858_46899302_46899457_46901024_46901086_46901413_46901481_46901765_46901861_46902525_46902668_46902748_46902791_46903269
transcript_134815.known	chr3	-	1012	6	FSM	ENSG00000160808.11	ENST00000395869.5	1012	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.01980390271856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTTATTTCCCTTC	-3	True	NA	0	True	AATAAA	-21	NA	46863442	46857871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
transcript_134830.known	chr3	-	8541	21	FSM	ENSG00000181555.22	ENST00000409792.4	8541	21	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_20	31.1289254552739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATGTGTGTTCCCTA	-10	True	NA	-28	True	AATAAA	-14	NA	47164113	47016435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47017255_47017637_47017740_47019759_47019841_47037665_47037778_47042560_47042701_47046486_47046622_47056820_47057491_47062162_47062347_47067069_47067119_47083719_47084383_47086194_47086315_47088112_47088248_47097954_47098082_47101457_47101556_47103345_47103424_47105996_47106121_47113875_47114005_47116622_47116755_47120181_47124549_47126647_47126664_47163853
transcript_134832.nic	chr3	-	4363	3	ISM	ENSG00000181555.22	ENST00000409792.4	8541	21	-21	104047	-21	0	5prime_fragment	FALSE	canonical	3	94	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGATTTTTCAAAA	-31	True	NA	NA	False	NA	NA	NA	47164134	47120482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47124549_47126647_47126664_47163853
transcript_134835.known	chr3	+	4622	10	FSM	ENSG00000114648.12	ENST00000232766.6	4622	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	11.8613387956289	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	-2	True	NA	17	True	AATAAA	-17	NA	47282943	47346816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_134845.known	chr3	+	2249	9	FSM	ENSG00000114648.12	ENST00000442272.1	2249	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.6419163988725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAGAACAGAAGGGAAAA	1	True	NA	NA	False	NA	NA	NA	47282946	47344577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47283095_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_13486.known	chr1	+	3107	13	FSM	ENSG00000143367.17	ENST00000368849.8	3107	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.9844211360174	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	1	True	NA	27	True	AATAAA	-23	NA	151540308	151583583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151540427_151562090_151562166_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_134860.known	chr3	+	375	2	FSM	ENSG00000114648.12	ENST00000483201.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	13	False	NA	23	True	AGTAAA	-16	NA	47282958	47287458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47283095_47287219
transcript_134862.known	chr3	-	633	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	8.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	17	True	NA	-5	True	AATAAA	-22	NA	47282766	47275227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47275491_47277281_47277380_47282494
transcript_134863.known	chr3	-	740	3	FSM	ENSG00000088727.14	ENST00000425853.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	49.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	265	False	NA	-5	True	AATAAA	-22	NA	47282518	47275227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47275491_47277281_47277380_47282139
transcript_134867.known	chr3	+	5237	25	FSM	ENSG00000076201.16	ENST00000265562.5	5237	25	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	16.7356904050396	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCTGAGTCTGCCC	-13	True	NA	24	True	AATAAA	-16	NA	47381020	47413435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47381181_47396142_47396218_47404651_47404780_47405004_47405082_47405748_47405799_47405914_47406047_47406324_47406406_47406480_47406613_47406702_47406751_47407129_47407187_47407308_47407368_47407504_47407585_47407696_47407812_47407889_47407956_47408344_47408491_47408775_47409088_47409162_47409318_47409416_47409569_47409654_47409835_47409927_47411687_47411782_47411968_47412093_47412199_47412282_47412422_47412513_47412628_47412705
transcript_13487.known	chr1	+	7250	12	FSM	ENSG00000143376.14	ENST00000368843.8	7250	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	16.1654667130147	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGACTACAAATCCTTT	-5	True	NA	31	True	AATAAA	-31	NA	151612028	151699091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
transcript_134870.known	chr3	+	5119	24	FSM	ENSG00000076201.16	ENST00000602307.5	5119	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	21.4897874369007	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCTGAGTCTGCCC	-23	True	NA	24	True	AATAAA	-16	NA	47381010	47413435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47381181_47396142_47396218_47405004_47405082_47405748_47405799_47405914_47406047_47406324_47406406_47406480_47406613_47406702_47406751_47407129_47407187_47407308_47407368_47407504_47407585_47407696_47407812_47407889_47407956_47408344_47408491_47408775_47409088_47409162_47409318_47409416_47409569_47409654_47409835_47409927_47411687_47411782_47411968_47412093_47412199_47412282_47412422_47412513_47412628_47412705
transcript_13488.known	chr1	+	6441	12	FSM	ENSG00000143376.14	ENST00000458013.7	6441	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	13.8223677870208	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGGTTTCCTAGACT	16	True	NA	20	True	AATAAA	-20	NA	151612049	151699080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151694369
transcript_134890.known	chr3	-	4254	23	FSM	ENSG00000114650.21	ENST00000265565.10	4254	23	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_7	136.365333322775	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTCTTGGAATTGT	-55	True	NA	1	True	TTTAAA	-38	NA	47475941	47413680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417827_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47475798
transcript_134908.known	chr3	-	3748	20	FSM	ENSG00000114650.21	ENST00000441517.6	3748	20	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_17	143.597101028617	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	-69	True	NA	-31	True	ATTAAA	-16	NA	47475955	47413712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47435007_47435138_47442871_47443092_47475798
transcript_134914.known	chr3	-	3430	18	FSM	ENSG00000114650.21	ENST00000320017.10	3430	18	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_15	156.328064236144	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	-51	True	NA	-31	True	ATTAAA	-16	NA	47475937	47413712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47435007_47435138_47442871_47443092_47475798
transcript_134918.nic	chr3	-	3426	17	NIC	ENSG00000114650.21	novel	3748	20	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_14	146.254273441838	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	NA	False	NA	-31	True	ATTAAA	-16	NA	47476046	47413712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47435007_47435138_47442871_47443092_47475798
transcript_134937.nic	chr3	-	1580	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	78.1487186217549	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	302	False	NA	-1	True	AATAAA	-19	NA	47513395	47495639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47512991
transcript_134938.nic	chr3	-	1369	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	88.3157215147262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	314	False	NA	-1	True	AATAAA	-19	NA	47513383	47495639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_13494.nnic	chr1	+	1572	11	NNC	ENSG00000143376.14	novel	6441	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.7322071750729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTAACCATTAACAAAAAA	-13	True	NA	NA	False	NA	NA	NA	151612020	151694485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_151612442_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151694369
transcript_134940.known	chr3	-	880	7	FSM	ENSG00000163832.16	ENST00000439305.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	83.5871135735381	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGTGGAAGATAGAGCAA	284	False	NA	NA	False	NA	NA	NA	47513413	47496028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513320
transcript_134941.known	chr3	-	1352	7	FSM	ENSG00000163832.16	ENST00000296149.9	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	35.7024742373224	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-15	True	NA	-1	True	AATAAA	-19	NA	47513712	47495639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_134944.known	chr3	-	1277	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	86.2429127522952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCTGTGGGTTGTCTT	-12	True	NA	-2	True	AATAAA	-18	NA	47513709	47495640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
transcript_134949.nnic	chr3	-	1003	5	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	85.0775381637245	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-15	True	NA	-1	True	AATAAA	-19	NA	47513712	47495639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47496198_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_134951.nic	chr3	-	923	5	ISM	ENSG00000163832.16	ENST00000296149.9	1352	7	-68	5802	-68	85	5prime_fragment	FALSE	canonical	3	159	junction_4	36.8128713903167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTCAGTGGGGCTGGT	NA	False	NA	-8	True	AATAAA	-14	NA	47513780	47501441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_134954.known	chr3	-	2154	5	FSM	ENSG00000114646.10	ENST00000264723.9	2154	5	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_4	3.53553390593274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTCTTAGTCTTTGT	-11	True	NA	-5	True	AATAAA	-17	NA	47578865	47562237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47562762_47569151_47569228_47572685_47572875_47576832_47577929_47578596
transcript_134958.known	chr3	-	2089	4	FSM	ENSG00000114646.10	ENST00000456150.5	2089	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.35702260395516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTTCTTAGTCTTTG	1066	False	NA	-6	True	AATAAA	-16	NA	47578133	47562238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47562762_47569151_47569228_47572685_47572875_47576832
transcript_13496.known	chr1	+	1437	11	FSM	ENSG00000143376.14	ENST00000642376.1	1437	11	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	20.4362423160423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGCCAGGACATTCT	19	False	NA	NA	False	NA	NA	NA	151612005	151693618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612382_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
transcript_134962.known	chr3	-	6354	28	FSM	ENSG00000173473.11	ENST00000254480.10	6354	28	0	0	0	0	multi-exon	FALSE	canonical	3	1370	junction_8	88.7732581244188	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTGAATTATTTTT	-23	True	NA	71	True	TATAAA	-1	NA	47781893	47585268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47588307_47590660_47590838_47610065_47610328_47622206_47622342_47635189_47635345_47636021_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_134979.nic	chr3	-	2720	24	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-82	50025	-82	35056	5prime_fragment	FALSE	canonical	3	1370	junction_4	87.0240607278105	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTGATACTGGGAAG	116	False	NA	-15	True	AAGAAA	-1	NA	47781975	47635293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47635345_47636021_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_134987.nic	chr3	-	2622	23	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-82	50800	-82	34281	5prime_fragment	FALSE	canonical	3	1370	junction_3	87.4720380351146	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTGAAAAGGAACAGGATA	116	False	NA	16	True	GATAAA	-27	NA	47781975	47636068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_13499.known	chr1	+	1347	10	FSM	ENSG00000143376.14	ENST00000642479.1	1347	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.9899258542686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAAAAGAGGTAATTCT	-2	True	NA	NA	False	NA	NA	NA	151612188	151693471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612513_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423
transcript_134992.nic	chr3	-	2466	22	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-29	53491	-29	31590	5prime_fragment	FALSE	canonical	3	1370	junction_2	85.7516585190952	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCCGACCCTGATGGT	-52	True	NA	-37	True	NA	NA	NA	47781922	47638759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_135010.nic	chr3	-	1292	11	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-31	116009	-31	-21055	5prime_fragment	FALSE	canonical	3	1430	junction_8	91.667660600672	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTATTCTTCTGCATGA	-54	True	NA	0	True	AATATA	-26	NA	47781924	47701277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_135034.known	chr3	+	3887	23	FSM	ENSG00000132153.15	ENST00000395745.6	3887	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	215.484295030888	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	-25	True	NA	24	True	AATAAA	-20	NA	47803133	47850192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_13504.known	chr1	-	2444	14	FSM	ENSG00000159409.15	ENST00000420342.1	2444	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.63902121174327	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTAAAAGCATCAAATAAG	-2	True	NA	NA	False	AATAAA	-8	NA	151716798	151702414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151703449_151705030_151705169_151705821_151705966_151706223_151706362_151706668_151706735_151707144_151707295_151707506_151707649_151707791_151707936_151708997_151709078_151709219_151709346_151709742_151709792_151714593_151714677_151715875_151715982_151716754
transcript_135040.known	chr3	+	3855	22	FSM	ENSG00000132153.15	ENST00000445061.6	3855	22	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	152.745842879624	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTGTCCACTAGGGG	-21	True	NA	25	True	AATAAA	-21	NA	47803137	47850193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_135046.nnic	chr3	+	3976	21	NIC	ENSG00000132153.15	novel	3887	23	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_3	148.853988861569	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	5	False	NA	24	True	AATAAA	-20	NA	47802919	47850192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_47803213_47805325_47805421_47810656_47810712_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_135066.known	chr3	+	1464	4	FSM	ENSG00000132153.15	ENST00000472718.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	112.07834561393	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTTCAGCTCCT	3	False	NA	47	True	NA	NA	NA	47802908	47816972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47815962
transcript_135067.known	chr3	+	3748	19	FSM	ENSG00000132153.15	ENST00000457607.1	3748	19	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	77.4583320881398	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	5	True	NA	19	True	AATAAA	-15	NA	47825027	47850187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_135068.known	chr3	-	5142	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_6	75.3862686845081	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGCCGGCACCCACAC	-14	True	NA	NA	False	GATAAA	-44	NA	48089272	47851867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_13507.nic	chr1	-	2645	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	57.7259389154359	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	115	False	NA	-15	True	AATAAA	-14	NA	151790538	151773493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_13508.nic	chr1	-	2620	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	66.6131639352723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	115	False	NA	-15	True	AATAAA	-14	NA	151790538	151773493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_135104.nnic	chr3	-	1716	8	NNC	ENSG00000047849.22	novel	5142	19	NA	NA	-23	173	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	197.31338380498	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGGCATCTCCTATA	-37	True	NA	NA	False	AAGAAA	-13	NA	48089295	47916688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47940498_47940535_47977864_47977934_47998637_47998880_48088772
transcript_135105.nic	chr3	-	1680	7	ISM	ENSG00000047849.22	ENST00000360240.10	5142	19	-23	64821	-23	173	5prime_fragment	FALSE	canonical	3	397	junction_1	32.8096361184062	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGGCATCTCCTATA	-37	True	NA	NA	False	AAGAAA	-13	NA	48089295	47916688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_135106.nnic	chr3	-	1611	6	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-23	173	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	159.18919561327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGGCATCTCCTATA	-37	True	NA	NA	False	AAGAAA	-13	NA	48089295	47916688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47998637_47998880_48088772
transcript_135107.known	chr3	-	899	6	FSM	ENSG00000047849.22	ENST00000423088.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	177.356815487875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCACAGAAACAGATGTAT	4	True	NA	NA	False	AAAAAG	-29	NA	48088801	47916861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47917175_47918718_47918842_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_135108.nnic	chr3	-	1557	6	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-23	173	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	162.821865853453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGGCATCTCCTATA	-37	True	NA	NA	False	AAGAAA	-13	NA	48089295	47916688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47917175_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_13511.known	chr1	-	2768	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_12	47.0841445357847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTCTAAAACCAAAT	-4	True	NA	-19	True	AATAAA	-10	NA	151790505	151773497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_135112.nic	chr3	-	3712	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_11	75.9694675511156	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	NA	False	NA	28	True	NA	NA	NA	48188442	48157145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_135113.nic	chr3	-	3715	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_15	62.6880814473976	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	NA	False	NA	28	True	NA	NA	NA	48188442	48157145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_135114.nic	chr3	-	2498	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-25	-1217	combination_of_known_junctions	FALSE	canonical	3	142	junction_15	62.6880814473976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGGGTAAGAAAATGCA	NA	False	NA	NA	False	TTTAAA	-10	NA	48188442	48158362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_135117.known	chr3	-	3844	15	FSM	ENSG00000164045.12	ENST00000302506.8	3844	15	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_11	42.2360350063926	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-18	True	NA	28	True	NA	NA	NA	48188417	48157145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_135119.nic	chr3	-	3592	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_9	102.70464886245	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	NA	False	NA	28	True	NA	NA	NA	48188442	48157145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_13512.known	chr1	-	2792	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_12	28.9888628039574	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	1	True	NA	-15	True	AATAAA	-14	NA	151790500	151773493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_135120.nic	chr3	-	3595	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_9	93.8371363760921	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	NA	False	NA	28	True	NA	NA	NA	48188442	48157145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_135125.nic	chr3	-	3727	14	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-6	0	intron_retention	FALSE	canonical	3	58	junction_9	96.8713537202698	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-24	True	NA	28	True	NA	NA	NA	48188423	48157145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_135126.known	chr3	-	3663	14	FSM	ENSG00000164045.12	ENST00000351231.7	3663	14	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	85.6249562691548	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	43	False	NA	28	True	NA	NA	NA	48188356	48157145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_135131.known	chr3	-	1353	7	FSM	ENSG00000172113.10	ENST00000452211.5	1353	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	70.3027184554212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTAATTGACTTGCC	278	False	NA	-113	True	AAAAAG	-3	NA	48301305	48294082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300430_48300635_48301278
transcript_135137.known	chr3	-	913	7	FSM	ENSG00000172113.10	ENST00000415053.5	913	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	69.850833129526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGTGGTTCAGAAGAA	258	False	NA	NA	False	NA	NA	NA	48301325	48294446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300526_48300635_48301278
transcript_135140.nnic	chr3	+	3607	6	NNC	ENSG00000164048.14	novel	3658	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	160.741531658747	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	-2	True	NA	-26	True	AATGAA	-38	NA	48241103	48270990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_48241215_48247624_48247678_48256815_48257023_48257928_48257962_48260812_48260940_48267914
transcript_135144.known	chr3	-	613	6	FSM	ENSG00000172113.10	ENST00000425930.5	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	59.5294884909992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATGTAGCTGGAACAGG	22	True	NA	NA	False	NA	NA	NA	48301353	48294675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301269
transcript_135145.known	chr3	-	2004	6	FSM	ENSG00000172113.10	ENST00000421967.5	2004	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	42.5064700957395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTATCTGAAAGCATCA	17	True	NA	NA	False	TATAAA	-3	NA	48301358	48293263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301295
transcript_135146.known	chr3	-	2903	6	FSM	ENSG00000172113.10	ENST00000442597.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	39.3212410790911	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	8	True	NA	-3	True	AATAAA	-21	NA	48301367	48292316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301352
transcript_135151.known	chr3	-	794	6	FSM	ENSG00000172113.10	ENST00000418431.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	63.0542623460143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTGCCTGAGGGCCTA	-12	True	NA	NA	False	NA	NA	NA	48301387	48294523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296237_48296726_48296830_48298426_48298524_48301352
transcript_135153.known	chr3	+	917	5	FSM	ENSG00000164048.14	ENST00000440261.6	917	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	186.963064534148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATTTGGAACATGGA	0	True	NA	NA	False	NA	NA	NA	48241105	48286630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267917_48268161_48286245
transcript_135155.known	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	63.8807482736388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
transcript_135156.known	chr3	-	599	5	FSM	ENSG00000172113.10	ENST00000435684.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	68.5870796870664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGACCAGCCTGATG	8	True	NA	NA	False	NA	NA	NA	48301367	48294654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301278
transcript_135159.known	chr3	+	3367	4	FSM	ENSG00000164048.14	ENST00000354698.8	3367	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_3	62.4517591603489	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	-2	True	NA	-26	True	AATGAA	-38	NA	48241103	48270990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267914
transcript_135160.known	chr3	+	1677	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	185.167191718428	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	-6	True	NA	NA	False	AATAAA	-26	NA	48241099	48287627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
transcript_135162.known	chr3	+	593	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	181.418484908971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	-5	True	NA	28	True	AATAAA	-19	NA	48241100	48299253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
transcript_135170.known	chr3	-	7308	38	FSM	ENSG00000164050.13	ENST00000358536.8	7308	38	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_37	82.738616120385	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	4502	False	NA	-7	True	ATTAAA	-14	NA	48429463	48403855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
transcript_135172.known	chr3	-	7178	38	FSM	ENSG00000164050.13	ENST00000296440.11	7178	38	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_37	80.7248299710165	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	-5	True	NA	-5	True	ATTAAA	-16	NA	48430086	48403853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48430007
transcript_13518.known	chr1	-	1224	7	FSM	ENSG00000143436.11	ENST00000368830.8	1224	7	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	57.2560040519769	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-5	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_135188.known	chr3	-	1461	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_3	55.7992433242204	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-16	True	NA	4	True	ATTAAA	-35	NA	48440081	48432163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
transcript_135189.known	chr3	-	1385	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	97.5329004319397	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGAGTTTTTTTCAT	11	True	NA	-2	True	ATTAAA	-29	NA	48440119	48432169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
transcript_13519.nic	chr1	-	1067	7	NIC	ENSG00000143436.11	novel	1224	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	218.556946558303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTAAGTGTTGCTT	-5	True	NA	-12	True	AATAAA	-13	NA	151763496	151759653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151760032_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_135190.known	chr3	-	1611	4	FSM	ENSG00000164051.14	ENST00000395694.7	1611	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	67.8347665696253	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGACTGAGTTTTTTT	11	True	NA	-5	True	ATTAAA	-26	NA	48440119	48432172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435137_48439987
transcript_135192.known	chr3	-	1554	4	FSM	ENSG00000164051.14	ENST00000442740.1	1554	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	100.982946855177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTTTTATTATTTAA	30	False	48440130	-27	True	ATTAAA	-4	NA	48440100	48432194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433977_48434816_48435016_48439987
transcript_135193.known	chr3	+	561	4	FSM	ENSG00000232112.3	ENST00000438607.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_1	2540.30868640451	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTTCTTGTGTGGTTGT	-2	True	NA	19	True	ATTAAA	-19	NA	48440256	48444208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48440313_48440402_48440459_48440540_48440629_48443847
transcript_135194.known	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	16226	junction_1	771.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	6	False	NA	14	True	ATTAAA	-14	NA	48440283	48444203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48440459_48440540_48440629_48443847
transcript_135197.known	chr3	+	2376	14	FSM	ENSG00000164053.22	ENST00000639561.1	2376	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.7660536902895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGTTTCCTGAGTC	-7	True	NA	22	True	ATTAAA	-34	NA	48446736	48465655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48446800_48450036_48450171_48450492_48450576_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
transcript_135199.nic	chr3	+	2298	13	NIC	ENSG00000164053.22	novel	2376	14	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	29.7988627672638	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGTTTCCTGAGTC	-12	True	NA	22	True	ATTAAA	-34	NA	48446731	48465655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_48446800_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
transcript_13520.known	chr1	+	851	6	FSM	ENSG00000143450.19	ENST00000321531.10	851	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2.48193472919817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	6	True	NA	4	True	AATAAA	-15	NA	151762968	151771330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151768057_151768234_151770171_151770258_151771076
transcript_135201.known	chr3	+	4576	13	FSM	ENSG00000164053.22	ENST00000320211.10	4576	13	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	11.0638927246346	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	-7	True	NA	4	True	AATAAA	-19	NA	48446736	48467645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48447093_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
transcript_135204.known	chr3	+	1096	2	FSM	ENSG00000213689.14	ENST00000625293.3	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	-27	True	NA	4	True	AATAAA	-19	NA	48466229	48467645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48466310_48466629
transcript_135205.known	chr3	+	629	2	FSM	ENSG00000213689.14	ENST00000456089.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	5	True	NA	4	True	AATAAA	-19	NA	48466261	48467645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48466310_48467064
transcript_13522.known	chr1	-	882	6	FSM	ENSG00000143436.11	ENST00000368829.3	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	230.753028149145	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCACTGGGGCAGGGAAG	7	True	NA	NA	False	NA	NA	NA	151763484	151759874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151760182_151760815_151760900_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_135233.known	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_4	522.054173434137	2187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-28	True	NA	-29	True	AATAAA	-15	NA	48504174	48467875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
transcript_135234.known	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	742.038974717636	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-4	True	NA	-30	True	AATAAA	-14	NA	48504795	48467876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
transcript_135235.known	chr3	-	2081	6	FSM	ENSG00000164054.17	ENST00000444115.5	2081	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	743.865417935261	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTTCTTCCTGGCCT	11	False	NA	-23	True	AATAAA	-21	NA	48504826	48467869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504629
transcript_135236.known	chr3	-	1933	6	FSM	ENSG00000164054.17	ENST00000443308.6	1933	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	738.494522660798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACTTGTTTATAATAA	17	True	NA	-64	True	NA	NA	NA	48504129	48467910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501157_48501294_48504018
transcript_135253.known	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	341.440412891555	1698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	6316	False	NA	-29	True	AATAAA	-15	NA	48473208	48467875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
transcript_135254.known	chr3	-	1739	4	FSM	ENSG00000164054.17	ENST00000465449.5	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	904.71026669684	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	5992	False	NA	-29	True	AATAAA	-15	NA	48473532	48467875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473433
transcript_135256.known	chr3	-	972	3	FSM	ENSG00000164054.17	ENST00000497863.1	972	3	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_2	346.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTCTTCTCCAGCTTAC	15	True	NA	NA	False	NA	NA	NA	48473079	48468767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469844_48473009
transcript_135257.known	chr3	-	1908	3	FSM	ENSG00000164054.17	ENST00000494854.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_2	376	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-9	True	NA	-29	True	AATAAA	-15	NA	48473103	48467875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469574_48469727_48469844_48473009
transcript_135258.known	chr3	-	1297	2	FSM	ENSG00000164054.17	ENST00000460758.1	1297	2	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTGCTGCTTGAGGC	14	True	NA	NA	False	NA	NA	NA	48473127	48468664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469844_48473009
transcript_135260.known	chr3	-	1757	15	FSM	ENSG00000114268.12	ENST00000490115.5	1757	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	23.775308749256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATAGTCACCATGCCA	9312	False	NA	NA	False	NA	NA	NA	48556923	48519673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48548531_48548660_48549863_48549961_48550117_48550235_48556680
transcript_135262.known	chr3	-	3499	14	FSM	ENSG00000114268.12	ENST00000232375.8	3499	14	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_6	8.21673858044713	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-2	True	NA	-30	True	AATAAA	-18	NA	48556803	48517683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_135269.known	chr3	-	1491	13	FSM	ENSG00000114268.12	ENST00000383734.6	1491	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.3729122993144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATAGTCACCATGCCA	9345	False	NA	NA	False	NA	NA	NA	48556890	48519673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_13527.known	chr1	+	745	5	FSM	ENSG00000143450.19	ENST00000635322.1	745	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	NA	False	NA	4	True	AATAAA	-15	NA	151762898	151771330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151770171_151770258_151771076
transcript_135288.known	chr3	-	778	6	FSM	ENSG00000010256.11	ENST00000412343.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	1291.73765138282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATGGAATCACTGAA	11	True	NA	NA	False	NA	NA	NA	48609636	48603562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609496
transcript_135290.known	chr3	-	1595	13	FSM	ENSG00000010256.11	ENST00000203407.6	1595	13	0	0	0	0	multi-exon	FALSE	canonical	3	2917	junction_12	172.385710931426	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	1	True	NA	-14	True	AATAAA	-16	NA	48609646	48599001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
transcript_135300.known	chr3	-	2630	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	0	0	0	multi-exon	FALSE	canonical	2	116	junction_5	42.8460908368546	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-28	True	NA	-5	True	AATAAA	-16	NA	48635483	48625722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_135301.nic	chr3	-	2534	21	NIC	ENSG00000225697.13	novel	2630	21	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_14	58.0423121524289	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	NA	False	NA	-5	True	AATAAA	-16	NA	48635501	48625722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631762_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_135306.nic	chr3	-	2595	21	NIC	ENSG00000225697.13	novel	2630	21	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	52	junction_13	53.8316589006878	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-22	True	NA	-5	True	AATAAA	-16	NA	48635477	48625722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631252_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_135317.known	chr3	-	2611	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_4	46.0480998522197	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-6	True	NA	-5	True	AATAAA	-16	NA	48635461	48625722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_13532.known	chr1	+	992	2	FSM	ENSG00000203288.5	ENST00000389897.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTGTCTGGCTTCC	10	True	NA	7	True	TATAAA	-20	NA	151790841	151794402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151791246_151793814
transcript_135321.nic	chr3	-	2517	21	NIC	ENSG00000225697.13	novel	2611	21	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	2	23	junction_14	60.2311381263877	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-26	True	NA	-5	True	AATAAA	-16	NA	48635481	48625722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631762_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_13534.known	chr1	-	3055	10	FSM	ENSG00000143365.19	ENST00000356728.11	3055	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.684934889218775	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGTGTCAGAGGG	-4	True	NA	NA	False	TATAAA	-17	NA	151826096	151806070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151807634_151811324_151811435_151812946_151813058_151813238_151813347_151813487_151813621_151814573_151814696_151814912_151815426_151816663_151816806_151817194_151817281_151825929
transcript_135392.known	chr3	-	2925	13	FSM	ENSG00000213672.8	ENST00000416649.6	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	32.2141273356892	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCCCTGTATGATCT	0	True	NA	-5	True	AATAAA	-18	NA	48685884	48673843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682136_48682347_48682553_48682902_48683013_48685636
transcript_135395.known	chr3	-	2977	13	FSM	ENSG00000213672.8	ENST00000294129.7	2977	13	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_10	20.6229376073234	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCCCTGTATGATCT	-31	True	NA	-5	True	AATAAA	-18	NA	48685915	48673843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682157_48682347_48682553_48682902_48683013_48685636
transcript_135396.nic	chr3	-	3008	13	NIC	ENSG00000213672.8	novel	2977	13	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_12	46.2915729071958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCCCTGTATGATCT	-33	True	NA	-5	True	AATAAA	-18	NA	48685917	48673843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682157_48682347_48682553_48682902_48683042_48685636
transcript_135429.nic	chr3	-	1765	6	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	283	junction_5	51.5325140081483	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	NA	False	NA	-3	True	AATACA	-20	NA	48717243	48688002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695419_48717156
transcript_135430.known	chr3	-	1746	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_5	17.8728844901991	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-16	True	NA	-3	True	AATACA	-20	NA	48717221	48688002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
transcript_135447.known	chr3	-	1309	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	154.615652506465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	48717278	48693452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
transcript_135449.known	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	78.6652542246081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	2	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
transcript_135456.nic	chr3	-	1005	4	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	0	21	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	120.999540862306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGTGCCTACCCGTG	-16	True	NA	50	True	AATAAA	-23	NA	48717221	48693763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48694241_48694693_48694825_48695089_48695422_48717156
transcript_135463.known	chr3	-	1185	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	103.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-11	True	NA	0	True	AATAAA	-21	NA	48717216	48693447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48695089_48695422_48717156
transcript_135465.known	chr3	-	973	3	FSM	ENSG00000068745.15	ENST00000443964.1	973	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTGTTACAGAATGTC	13	True	NA	NA	False	NA	NA	NA	48717192	48694623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48695422_48715388_48715528_48717156
transcript_135466.known	chr3	-	2490	9	FSM	ENSG00000068745.15	ENST00000433104.2	2490	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	123.79393159602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAATGTGTCTTGTAA	NA	False	NA	-8	True	AATAAA	-13	NA	48740353	48693455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48694693_48695422_48717156_48717488_48717869_48717890_48718647_48718758_48729654_48729778_48738881_48738967_48739586_48739747_48740205
transcript_135469.nic	chr3	-	893	3	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	6	21	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	57	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGTGCCTACCCGTG	NA	False	NA	50	True	AATAAA	-23	NA	48717243	48693763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48694241_48695089_48695419_48717156
transcript_13547.nnic	chr1	+	2026	4	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-2994	1161	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	18.9912260443255	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCAAAGTTCTGATTT	426	False	NA	10	True	AGTAAA	-22	NA	151838882	151851546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_151839106_151841740_151842032_151844044_151844243_151850232
transcript_135471.known	chr3	-	1124	2	FSM	ENSG00000068745.15	ENST00000417896.1	1124	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGGGTGCCTTTCTCT	-1	True	NA	NA	False	NA	NA	NA	48717206	48694344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48695419_48717156
transcript_135472.known	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	13	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48695422_48717156
transcript_135475.known	chr3	-	6492	11	FSM	ENSG00000114302.16	ENST00000265563.13	6492	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	4.43734154646676	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGACTTTCTGGTGCAG	-30	True	NA	-29	True	AATAAA	-14	NA	48847874	48746585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48751719_48752175_48752318_48756378_48756445_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
transcript_135479.known	chr3	-	3318	10	FSM	ENSG00000114302.16	ENST00000296446.12	3318	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	25.219040425837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGTGGTGG	16	True	NA	NA	False	AATACA	-6	NA	48847828	48749647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48751719_48752175_48752318_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
transcript_135484.known	chr3	+	3469	3	FSM	ENSG00000224424.8	ENST00000655796.1	3469	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATAGGTTTGTTATTC	NA	False	NA	7	True	AATGAA	-19	NA	48847850	48851976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48848026_48848104_48848409_48848986
transcript_135485.known	chr3	+	3447	2	FSM	ENSG00000224424.8	ENST00000416209.2	3447	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTTTGTTATTCAAACG	17	True	NA	12	True	AATGAA	-24	NA	48847956	48851981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48848409_48848986
transcript_135487.known	chr3	-	1778	9	FSM	ENSG00000178537.10	ENST00000319017.5	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	5.88960949469487	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTATATTTTCTT	-3	True	NA	-2	True	AATAAA	-25	NA	48898882	48856925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
transcript_135502.known	chr3	+	2278	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	165.665219173338	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	-21	True	NA	-56	True	NA	NA	NA	48918835	48983620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_135509.nic	chr3	+	2209	17	NIC	ENSG00000177479.20	novel	2278	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	223.651925083935	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	-28	True	NA	-56	True	NA	NA	NA	48918828	48983620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_48918999_48922747_48922812_48927461_48927814_48945135_48945182_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_135524.known	chr3	+	4912	16	FSM	ENSG00000177479.20	ENST00000356401.9	4912	16	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	86.4256649124296	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATGATCTCTGCTCA	-15	True	NA	NA	False	NA	NA	NA	48918841	48986382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48918999_48922747_48922812_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_13554.known	chr1	-	4798	6	FSM	ENSG00000159445.13	ENST00000368814.8	4798	6	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	26.8477187112797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTGGAAGAATTTT	1	True	NA	NA	False	AATAAA	-21	NA	151909511	151870865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151895007_151895195_151909359
transcript_135543.nic	chr3	+	2116	15	NIC	ENSG00000177479.20	novel	2278	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	180.640823577776	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	581	False	NA	-56	True	NA	NA	NA	48918811	48983620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_48918999_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_135565.known	chr3	-	1968	12	FSM	ENSG00000178149.17	ENST00000313778.9	1968	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	61.8976761603341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTCTGTCTTGTCAT	9103	False	NA	-18	True	AATAAA	-16	NA	49021251	49015492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49020845
transcript_135577.known	chr3	+	1771	9	FSM	ENSG00000178467.18	ENST00000383729.9	1771	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	14.9979165219706	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCGATAGGTGCAGCGG	2	True	NA	65	True	NA	NA	NA	48990240	49007153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005047_49005776_49005868_49006063_49006188_49006686
transcript_13558.known	chr1	-	643	2	FSM	ENSG00000159445.13	ENST00000489410.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	205	False	NA	NA	False	AATAAA	-24	NA	151909637	151894829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151895195_151909359
transcript_135581.known	chr3	+	2796	8	FSM	ENSG00000178467.18	ENST00000472301.5	2796	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	12.5324069711207	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	16	False	NA	27	True	AATAAA	-17	NA	48989907	49007115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005868_49006063_49006188_49006686
transcript_135609.known	chr3	+	4070	6	FSM	ENSG00000178252.19	ENST00000608424.6	4070	6	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_1	47.2330392839589	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTCTATGCCTCA	4	True	NA	13	True	AATAAA	-18	NA	49007390	49015951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_13561.known	chr1	-	616	3	FSM	ENSG00000197747.9	ENST00000368809.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1474.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAGACAGAATGTTT	1	True	NA	-19	True	AATAAA	-21	NA	151992578	151982917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151983325_151986098_151986252_151992522
transcript_135611.known	chr3	+	3916	6	FSM	ENSG00000178252.19	ENST00000452875.5	3916	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	232.7862538897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGGCTCAGTGGAGGG	10	True	NA	95	True	NA	NA	NA	49007396	49015589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49007532_49011420_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_135620.known	chr3	+	3565	5	FSM	ENSG00000178252.19	ENST00000471162.5	3565	5	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_1	46.1864428160472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCAGCATGCCTTGA	16	True	NA	NA	False	NA	NA	NA	49007402	49015365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49007532_49011634_49014294_49014382_49014500_49014599_49014719_49014824
transcript_135623.known	chr3	+	902	5	FSM	ENSG00000178057.15	ENST00000326925.11	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	48.602983447521	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTTTTTCTTTT	9	True	NA	NA	False	NA	NA	NA	49022120	49023495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49022222_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_13563.known	chr1	-	671	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	2961	junction_2	0.5	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACAGAATGTTTGTT	-22	True	NA	-16	True	AATAAA	-24	NA	151993859	151982914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151983325_151986098_151986252_151993751
transcript_135637.known	chr3	-	1042	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTGGCTGGTCGCT	1078	False	NA	NA	False	AATAAA	-35	NA	48918823	48917781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48917800_48918800
transcript_135638.known	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_11	29.7151768552232	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-5	True	NA	-13	True	AATAAA	-21	NA	49018580	49015487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_135639.known	chr3	-	1706	12	FSM	ENSG00000178149.17	ENST00000441576.6	1706	12	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_3	52.1750074744477	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	11	True	NA	-13	True	AATAAA	-21	NA	49018564	49015487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016061_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_135640.known	chr3	-	1886	10	FSM	ENSG00000178149.17	ENST00000460505.5	1886	10	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	22.7861773130819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	9	True	NA	-13	True	AATAAA	-21	NA	49018566	49015487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022
transcript_135644.known	chr3	-	1751	15	FSM	ENSG00000178035.13	ENST00000429182.6	1751	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	758.933976451341	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	9	True	NA	31	True	AATAAA	-18	NA	49029426	49024324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_13565.known	chr1	-	563	3	FSM	ENSG00000163191.6	ENST00000271638.3	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	3404	junction_2	62.5	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGAGTTGGTGAATTTG	-1	True	NA	-4	True	AATAAA	-27	NA	152037004	152032505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_152032824_152033647_152033801_152036912
transcript_135650.known	chr3	-	1704	14	FSM	ENSG00000178035.13	ENST00000677480.1	1704	14	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	620.893667825307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	15	True	NA	13	True	NA	NA	NA	49029420	49024342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028198_49028323_49028430_49028533_49028757_49028807_49029252
transcript_135652.known	chr3	-	1657	14	FSM	ENSG00000178035.13	ENST00000677010.1	1657	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	783.00054032794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	5	True	NA	13	True	NA	NA	NA	49029398	49024342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026598_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028721_49028807_49029252
transcript_135653.known	chr3	-	1628	14	FSM	ENSG00000178035.13	ENST00000679117.1	1628	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	622.336768361341	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-13	True	NA	31	True	AATAAA	-18	NA	49029416	49024324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028766_49029252
transcript_135655.known	chr3	-	1651	14	FSM	ENSG00000178035.13	ENST00000326739.9	1651	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	273.715007490353	5224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	5	True	NA	31	True	AATAAA	-18	NA	49029398	49024324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_135662.known	chr3	-	1881	13	FSM	ENSG00000178035.13	ENST00000676607.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	276.406051951754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	14	True	NA	13	True	NA	NA	NA	49029421	49024342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028807_49029252
transcript_135663.known	chr3	-	1538	13	FSM	ENSG00000178035.13	ENST00000442157.2	1538	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	640.238215215417	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	3788	False	NA	13	True	NA	NA	NA	49029378	49024342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028430_49028533_49028757_49028807_49029252
transcript_13567.known	chr1	-	673	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	73	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9805	False	NA	-6	True	AATAAA	-20	NA	153536215	153534598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153534831_153535201_153535376_153535948
transcript_135677.known	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	283.116142245546	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-13	True	NA	31	True	AATAAA	-18	NA	49029416	49024324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_13568.nnic	chr1	-	746	3	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-227	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	70	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9549	False	NA	-6	True	AATAAA	-20	NA	153536471	153534598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153534831_153535201_153535361_153536116
transcript_135683.known	chr3	-	2110	12	FSM	ENSG00000178035.13	ENST00000462980.2	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	296.577390844836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTGATGCCTGAT	9	True	NA	23	True	AATAAA	-10	NA	49029426	49024332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49028533_49028757_49028807_49029252
transcript_13569.known	chr1	+	531	2	FSM	ENSG00000238279.2	ENST00000420695.2	709	2	164	14	164	-14	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCACCTGGCACCTCTC	155	False	NA	NA	False	NA	NA	NA	153533602	153535115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153533922_153534903
transcript_135708.known	chr3	-	2078	13	FSM	ENSG00000178035.13	ENST00000678001.1	2078	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	284.876727726222	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	6	True	NA	13	True	NA	NA	NA	49029397	49024342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757
transcript_135709.known	chr3	-	2426	11	FSM	ENSG00000178035.13	ENST00000679339.1	2426	11	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	302.637472894551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-12	True	NA	13	True	NA	NA	NA	49029447	49024342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49027048_49027709_49027917_49028247_49028323_49028430
transcript_13571.known	chr1	-	673	4	FSM	ENSG00000197956.10	ENST00000368720.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7678690770727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9776	False	NA	-6	True	AATAAA	-20	NA	153536244	153534598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153534831_153535201_153535361_153535788_153535934_153536107
transcript_135710.known	chr3	-	2663	11	FSM	ENSG00000178035.13	ENST00000678603.1	2663	11	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	302.630071209059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	9	True	NA	13	True	NA	NA	NA	49029426	49024342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49028323_49028430
transcript_135716.known	chr3	-	3009	11	FSM	ENSG00000198218.11	ENST00000424300.5	3009	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	152.171909365691	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGCTGGCTGACTCT	-3	True	NA	20	True	NA	NA	NA	49093611	49030211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49092396_49092457_49093254
transcript_135717.known	chr3	-	3083	11	FSM	ENSG00000198218.11	ENST00000357496.6	3083	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	145.248924264519	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTCCTTTATGACAAGT	-3	True	NA	-63	True	ATTAAA	-15	NA	49094062	49029931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49092396_49092457_49093911
transcript_13572.known	chr1	-	566	4	FSM	ENSG00000196154.12	ENST00000354332.8	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	111.505854355525	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	2	True	NA	1	True	AATAAA	-25	NA	153545802	153543612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153543924_153544653_153544810_153545469_153545519_153545752
transcript_13573.known	chr1	-	573	3	FSM	ENSG00000196154.12	ENST00000368715.5	573	3	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	115.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	5031	False	NA	1	True	AATAAA	-25	NA	153545063	153543612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153543924_153544653_153544810_153544957
transcript_135732.known	chr3	-	3257	10	FSM	ENSG00000198218.11	ENST00000395443.7	3257	10	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_7	38.6637929966641	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTGAACAACGTCTCT	-12	True	NA	-8	True	NA	NA	NA	49094071	49029706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49093911
transcript_13574.known	chr1	-	513	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	16	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGATGGTTTGAGAGA	-2	True	NA	-7	True	AATAAA	-17	NA	153545806	153543620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153543924_153544653_153544810_153545752
transcript_13575.known	chr1	-	755	2	FSM	ENSG00000196154.12	ENST00000481009.1	755	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-9	True	NA	1	True	AATAAA	-25	NA	153545097	153543612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153543924_153544653
transcript_13576.known	chr1	-	956	3	FSM	ENSG00000188643.11	ENST00000368705.2	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	409.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTCCCTCCCTGGGGG	6978	False	NA	NA	False	NA	NA	NA	153609344	153607361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153607693_153607998_153608178_153608898
transcript_135768.nic	chr3	-	3693	9	NIC	ENSG00000198218.11	novel	3257	10	NA	NA	15	-54	intron_retention	FALSE	canonical	3	312	junction_6	40.9403147887263	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATTCTTACTCTAGTT	7462	False	NA	-27	True	TATAAA	-20	NA	49094215	49029760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49030645_49032182_49032274_49032621_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49093911
transcript_13577.known	chr1	-	1146	3	FSM	ENSG00000188643.11	ENST00000368704.5	1146	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	405	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-5	True	NA	-6	True	ATTAAA	-21	NA	153609337	153606885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153607693_153607998_153608178_153609177
transcript_13578.known	chr1	-	1172	3	FSM	ENSG00000188643.11	ENST00000368706.9	1172	3	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_2	38.5	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-13	True	NA	-6	True	ATTAAA	-21	NA	153613137	153606885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153607693_153607998_153608178_153612951
transcript_13579.known	chr1	-	1080	4	FSM	ENSG00000189334.9	ENST00000368701.5	1080	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	147.359726142827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	8257	False	NA	-9	True	AATAAA	-21	NA	153616289	153614254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616232
transcript_135795.known	chr3	-	2449	24	FSM	ENSG00000172053.18	ENST00000306125.12	2449	24	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_23	69.8832675073563	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	-4	True	NA	-3	True	AATAAA	-22	NA	49104757	49095931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_135796.known	chr3	-	2412	24	FSM	ENSG00000172053.18	ENST00000414533.5	2412	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	158.413018120415	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTCTGTGTGTTATCT	-5	True	NA	-8	True	AATAAA	-17	NA	49104758	49095936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104356_49104472_49104616
transcript_13580.known	chr1	-	1054	4	FSM	ENSG00000189334.9	ENST00000344616.4	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	49.8687165354081	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-3	True	NA	-9	True	AATAAA	-21	NA	153616325	153614254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294
transcript_135802.nic	chr3	-	2374	23	NIC	ENSG00000172053.18	novel	2449	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	147.887640228085	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	7005	False	NA	-4	True	AATAAA	-21	NA	49104809	49095932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_135824.known	chr3	-	2362	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_18	64.6352768096839	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGTCTGTGTGTTAT	-33	True	NA	-10	True	AATAAA	-15	NA	49104532	49095938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
transcript_135825.known	chr3	-	859	8	FSM	ENSG00000172053.18	ENST00000453392.5	859	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	250.490620623624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	5503	False	NA	-3	True	AATAAA	-22	NA	49099595	49095931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509
transcript_135833.nic	chr3	-	4799	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_24	64.7483636219169	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	NA	False	NA	-20	True	AATAAA	-16	NA	49120952	49108049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
transcript_135835.nic	chr3	-	4844	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_17	52.8269475791716	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	NA	False	NA	-20	True	AATAAA	-16	NA	49120952	49108049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_135836.known	chr3	-	4719	27	FSM	ENSG00000172046.20	ENST00000453664.5	4719	27	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	73.4440273128387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	-22	True	NA	-28	True	TATAAA	-18	NA	49120938	49108130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117466_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_135841.nic	chr3	-	4805	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_24	56.9129408855024	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	NA	False	NA	-20	True	AATAAA	-16	NA	49120952	49108049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
transcript_135842.nic	chr3	-	4993	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_26	66.5222301234085	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	0	True	NA	-20	True	AATAAA	-16	NA	49120807	49108049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120467
transcript_135843.known	chr3	-	4706	27	FSM	ENSG00000172046.20	ENST00000417901.6	4721	27	15	0	-1	0	multi-exon	FALSE	canonical	3	182	junction_17	42.4093359432558	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	-1	True	NA	-20	True	AATAAA	-16	NA	49120808	49108049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_135853.nic	chr3	-	4763	27	NIC	ENSG00000172046.20	novel	4719	27	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_17	52.8269475791716	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	NA	False	NA	-28	True	TATAAA	-18	NA	49120952	49108130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_135864.known	chr3	-	4677	27	FSM	ENSG00000172046.20	ENST00000434032.6	4677	27	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	67.530718410173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCCTCAGGCTTGGC	85	False	NA	-80	True	NA	NA	NA	49120831	49108752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_135866.nic	chr3	-	4837	27	FSM	ENSG00000172046.20	ENST00000306026.6	4665	27	-134	-38	-14	0	multi-exon	FALSE	canonical	3	66	junction_1	70.4712056687153	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	NA	False	NA	-2	True	AATAAA	-19	NA	49120952	49108674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
transcript_135868.nic	chr3	-	4882	27	FSM	ENSG00000172046.20	ENST00000692912.1	4755	27	-129	2	-14	0	multi-exon	FALSE	canonical	3	66	junction_1	60.2177508280814	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	NA	False	NA	-2	True	AATAAA	-19	NA	49120952	49108674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_13587.known	chr1	+	2165	6	FSM	ENSG00000160679.13	ENST00000368690.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_3	133.540405870283	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	2022	False	NA	17	True	NA	NA	NA	153633981	153646305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642242_153642430_153643226_153643365_153645063
transcript_135883.known	chr3	-	4559	26	FSM	ENSG00000172046.20	ENST00000398888.6	4559	26	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_21	81.5396443455575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	-22	True	NA	-2	True	AATAAA	-19	NA	49120938	49108674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_13590.known	chr1	+	2079	6	FSM	ENSG00000160679.13	ENST00000368694.8	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	148.386791865044	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	-11	True	NA	18	True	NA	NA	NA	153634065	153646306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153643226_153643365_153645063
transcript_135910.known	chr3	-	5674	33	FSM	ENSG00000172037.14	ENST00000418109.5	5674	33	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_32	45.3114224009796	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	NA	False	NA	-1	True	AATAAA	-17	NA	49133118	49121113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791_49132869_49132954
transcript_135911.known	chr3	-	5692	32	FSM	ENSG00000172037.14	ENST00000305544.9	5692	32	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_28	40.7863905807771	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	-22	True	NA	-1	True	AATAAA	-17	NA	49133050	49121113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791
transcript_135925.known	chr3	-	1791	2	FSM	ENSG00000177352.10	ENST00000321895.7	1791	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAGTCTCCCTGCCCA	3	True	NA	NA	False	NA	NA	NA	49166331	49162534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49164261_49166266
transcript_135929.known	chr3	+	1972	6	FSM	ENSG00000185909.15	ENST00000332780.4	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	7.52595508889071	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	-13	True	NA	25	True	AGTAAA	-18	NA	49171597	49176486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49171686_49172635_49173146_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_135931.known	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_16	33.2917427608472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-16	True	NA	NA	False	NA	NA	NA	49340053	49277143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_135933.known	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_15	32.0019921254912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	4	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_135937.known	chr3	-	899	2	FSM	ENSG00000233276.8	ENST00000419783.3	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	2377	junction_1	0	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTATGTCCTGTGTC	10	True	NA	-14	True	AATAAA	-20	NA	49358353	49357175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49357748_49358026
transcript_135938.known	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	3	True	NA	-39	True	NA	NA	NA	49358325	49357200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49357748_49358164
transcript_135939.known	chr3	-	1135	1	FSM	ENSG00000233276.8	ENST00000419349.2	1135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTATGTCCTGTG	4232	False	NA	-16	True	AATAAA	-18	NA	49358312	49357177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49357200_49358300
transcript_135940.known	chr3	-	1944	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1186.04714914712	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCCTGTTGTTTGTGTTG	4	True	NA	-4	True	AATAAA	-21	NA	49411970	49359138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_135944.known	chr3	-	1971	5	FSM	ENSG00000067560.14	ENST00000679208.1	1971	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1233.80042956712	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	448	False	NA	-10	True	AATAAA	-15	NA	49411645	49359144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411322
transcript_135945.known	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1076.37966698559	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-2	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_135950.known	chr3	-	1641	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1135.62082873936	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	46	True	NA	-5	True	AATAAA	-20	NA	49411928	49359139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
transcript_135951.known	chr3	+	2146	3	FSM	ENSG00000145022.5	ENST00000273590.4	1930	3	-217	1	-6	-1	multi-exon	TRUE	canonical	3	39	junction_2	0.5	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTGTTGTGGTTATTC	-6	True	NA	20	True	ATTAAA	-12	NA	49412205	49416475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49412641_49413055_49413111_49414819
transcript_135952.known	chr3	-	1582	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	846.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-26	True	NA	-5	True	AATAAA	-20	NA	49412000	49359139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49375433_49375592_49411819
transcript_135953.known	chr3	-	2266	11	FSM	ENSG00000283189.2	ENST00000636166.1	2266	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	240.131214130941	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-18	True	NA	-23	True	ATTAAA	-3	NA	49429310	49416793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_135954.known	chr3	-	1646	10	FSM	ENSG00000145020.16	ENST00000427987.6	1646	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	189.946191210973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCCCTGGTATGCA	4	True	NA	-82	True	NA	NA	NA	49422458	49416852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_135955.known	chr3	-	1613	9	FSM	ENSG00000145020.16	ENST00000636978.1	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	175.606805107319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTCACTCTTCCACATT	8	True	NA	NA	False	NA	NA	NA	49422454	49416993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417358_49417614_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_135956.known	chr3	-	1914	9	FSM	ENSG00000145020.16	ENST00000636865.1	1914	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	213.742799586325	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTCCACTGAATCCTGA	-5	True	NA	-58	True	NA	NA	NA	49422467	49416828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419394_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_135959.known	chr3	-	1620	8	FSM	ENSG00000145020.16	ENST00000636522.1	1620	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	179.665448735665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCCACATTCCCAAGT	-11	True	NA	NA	False	NA	NA	NA	49422473	49416986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422360
transcript_135960.known	chr3	-	1783	8	FSM	ENSG00000145020.16	ENST00000638063.1	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	168.492354335109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCAGGGTGGGCTTCCT	2	True	NA	-127	True	NA	NA	NA	49422460	49416897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49422103_49422272_49422360
transcript_135961.known	chr3	-	2403	8	FSM	ENSG00000145020.16	ENST00000636991.1	2403	8	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_3	78.3414817009612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-11	True	NA	-23	True	ATTAAA	-3	NA	49422473	49416793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_135962.known	chr3	-	1991	8	FSM	ENSG00000145020.16	ENST00000637114.1	1991	8	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_4	60.8832941799644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGATCTTTGCCCCT	-5	True	NA	-90	True	NA	NA	NA	49422442	49416860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_135964.known	chr3	-	2662	7	FSM	ENSG00000145020.16	ENST00000637291.1	2662	7	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	79.6840985112811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	4	True	NA	-53	True	NA	NA	NA	49422458	49416823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49420343_49421491_49421573_49422103_49422272_49422360
transcript_135965.known	chr3	-	2448	7	FSM	ENSG00000145020.16	ENST00000638092.1	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	171.797765475056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	8	True	NA	-53	True	NA	NA	NA	49422454	49416823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_135970.nnic	chr3	-	1629	7	NNC	ENSG00000145029.14	novel	2040	7	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	12.4186240067981	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-29	True	NA	-4	True	AATAAA	-16	NA	49429321	49422945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_49423539_49424520_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_135971.known	chr3	-	1921	7	FSM	ENSG00000145029.14	ENST00000615713.4	1921	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	12.9486163997034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGCTGGCTGCCTGTG	4	True	NA	-5	True	AATAAA	-15	NA	49429288	49422946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49423506_49424161_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_135974.nnic	chr3	-	1973	7	NNC	ENSG00000145029.14	novel	1921	7	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.9486163997034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGACTGCTGGCTGCCT	-29	True	NA	-8	True	AATAAA	-12	NA	49429321	49422949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_49423511_49424144_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_135976.known	chr3	-	2040	7	FSM	ENSG00000145029.14	ENST00000423832.5	2040	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	12.9486163997034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGCCTGGTATGCAGT	-16	True	NA	-51	True	NA	NA	NA	49429308	49422992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49423564_49424074_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_135977.known	chr3	-	2768	6	FSM	ENSG00000145020.16	ENST00000635772.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_5	41.8788729552265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	8	True	NA	-51	True	NA	NA	NA	49422454	49416821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49420343_49421491_49421573_49422103_49422272_49422360
transcript_135985.known	chr3	-	3227	6	FSM	ENSG00000145029.14	ENST00000273598.8	3227	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	9.76524449258696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGGGAAGCGGCTG	-32	True	NA	NA	False	NA	NA	NA	49429324	49422332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_13599.known	chr1	+	1923	5	FSM	ENSG00000160679.13	ENST00000403433.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	275.698544609869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCAGGACTCTCTTTA	3	True	NA	14	True	NA	NA	NA	153634079	153646302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153645063
transcript_135997.known	chr3	-	1509	6	FSM	ENSG00000145020.16	ENST00000636597.1	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	221.999459458801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTCCTTCTTACTTG	6801	False	NA	-30	True	NA	NA	NA	49422491	49416800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_135999.known	chr3	+	4517	5	FSM	ENSG00000173402.12	ENST00000673708.1	4517	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	252.3281593481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAAATTGTTTTATTAA	12	True	NA	-25	True	ACTAAA	-12	NA	49470295	49534492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49487253_49487416_49488625_49488746_49510418_49510820_49530796
transcript_136003.known	chr3	+	549	4	FSM	ENSG00000173402.12	ENST00000431960.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	274.209571111019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTCCCCCTTGACACTG	-37	True	NA	NA	False	NA	NA	NA	49470246	49530864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470275_49476848_49476901_49510418_49510820_49530796
transcript_136005.known	chr3	+	5582	4	FSM	ENSG00000173402.12	ENST00000538711.5	5582	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	269.407992952449	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCTGGGCATCTGT	-5	True	NA	18	True	AATAAA	-23	NA	49470131	49535618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49476848_49476906_49510418_49510820_49530796
transcript_136007.known	chr3	+	730	4	FSM	ENSG00000173402.12	ENST00000452060.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	269.407992952449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACACGGCTGGGGGCCAA	-5	True	NA	NA	False	NA	NA	NA	49470278	49530913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49476848_49476906_49510418_49510820_49530796
transcript_136012.known	chr3	+	5676	4	FSM	ENSG00000173402.12	ENST00000541308.5	5676	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	276.515219593184	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCTGGGCATCTGT	-5	True	NA	18	True	AATAAA	-23	NA	49470131	49535618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49492822_49492974_49510418_49510820_49530796
transcript_136017.known	chr3	+	5387	3	FSM	ENSG00000173402.12	ENST00000308775.7	5387	3	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	90	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTTGCATCTGGGCATC	-17	True	NA	15	True	AATAAA	-20	NA	49470266	49535615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49510418_49510820_49530796
transcript_136020.known	chr3	+	579	3	FSM	ENSG00000173402.12	ENST00000421560.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	253.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCACTGGGACTCACAGA	-5	True	NA	NA	False	NA	NA	NA	49470131	49530831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470275_49510418_49510820_49530796
transcript_136041.known	chr3	-	2621	18	FSM	ENSG00000173531.16	ENST00000449682.3	3042	18	421	0	-380	0	multi-exon	FALSE	canonical	0	0	junction_14	8.06676294184114	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGCTTCTTAGCCTTTG	414	False	NA	-25	True	CATAAA	-26	NA	49689053	49683946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49684190_49684313_49684454_49684549_49684657_49684737_49684885_49685011_49685090_49685261_49685383_49685470_49685507_49685595_49685733_49685859_49685963_49686061_49686193_49686312_49686482_49686683_49686803_49686946_49687068_49687148_49687286_49687363_49687479_49687555_49687669_49687749_49687898_49688597
transcript_136056.known	chr3	+	2249	22	FSM	ENSG00000164062.13	ENST00000438011.5	2249	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	280.397927475269	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGCCATTCTGCATGA	-6	True	NA	NA	False	NA	NA	NA	49674366	49683342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49674414_49674488_49674622_49675182_49675310_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682827_49682946_49683039_49683147_49683236
transcript_136062.known	chr3	+	4255	39	FSM	ENSG00000164068.16	ENST00000327697.11	4255	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	31.6696613736798	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGGCCCTTCT	0	True	NA	28	True	ATTAAA	-16	NA	49689556	49721529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49689607_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
transcript_136064.nic	chr3	+	4435	39	NIC	ENSG00000164068.16	novel	4255	39	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	33.5884741476577	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGGCCCTTCT	36	False	NA	28	True	ATTAAA	-16	NA	49689592	49721529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_49689823_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
transcript_13609.known	chr1	+	1840	4	FSM	ENSG00000160679.13	ENST00000614256.4	1840	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_3	324.982392685443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	2022	False	NA	17	True	NA	NA	NA	153633981	153646305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153645063
transcript_136097.known	chr3	-	6108	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	71.6360830522002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGCAGACAATGGCG	-5	True	NA	-16	True	AATAAA	-23	NA	49723951	49716843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
transcript_136101.known	chr3	-	3144	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	22.868851632734	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCTTCCAGACTCCCC	-5	True	NA	-8	True	AATAAA	-19	NA	49723951	49719915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_136106.known	chr3	-	3217	8	FSM	ENSG00000173540.14	ENST00000308375.10	3217	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	23.1604871120041	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGAGACATTCTTCCA	-5	True	NA	-16	True	AATAAA	-11	NA	49723951	49719923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_136108.known	chr3	-	2919	8	FSM	ENSG00000173540.14	ENST00000678208.1	2919	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	23.9923457181916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCACACAGCCTGTTTT	3	True	NA	NA	False	NA	NA	NA	49723943	49720349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49723115_49723253_49723303_49723391_49723473_49723597
transcript_136111.known	chr3	-	2510	7	FSM	ENSG00000173540.14	ENST00000677393.1	2510	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	115.540396975834	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTCTT	-5	True	NA	NA	False	NA	NA	NA	49723951	49720334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49721884_49721972_49722148_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_136115.known	chr3	-	2048	6	FSM	ENSG00000173540.14	ENST00000678010.1	2048	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.2099791263597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGTGCCAGGTGCTGG	25	True	NA	NA	False	GGGGCT	-4	NA	49723921	49720615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49721884_49721964_49722148_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_136119.known	chr3	-	2856	1	FSM	ENSG00000176020.9	ENST00000320431.8	2856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGTCCTCCGTGTGTTC	-4	True	NA	-1	True	AATAAA	-38	NA	49719684	49716828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49716800_49719700
transcript_13612.known	chr1	+	559	3	FSM	ENSG00000160678.12	ENST00000292169.6	559	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGATGTCTGTCTCCTCTG	12	True	NA	11	True	ATTAAA	-21	NA	153628433	153632039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153628497_153630508_153630663_153631697
transcript_136123.known	chr3	-	4471	6	FSM	ENSG00000176095.12	ENST00000321599.9	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	14.5106857177736	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTCTGTCTTTGTGAA	-10	True	NA	-1	True	AATAAA	-16	NA	49786542	49724293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_136124.known	chr3	-	1815	6	FSM	ENSG00000176095.12	ENST00000468463.5	1815	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	67.7802331067104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGGCTCTGACTGGT	-8	True	NA	0	True	TATAAA	-44	NA	49786540	49726912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49727621_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_136128.known	chr3	-	4117	5	FSM	ENSG00000176095.12	ENST00000395238.5	4117	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	66.7944608481871	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGAGTCTGTCTTTGTGA	-8	True	NA	-2	True	AATAAA	-15	NA	49786540	49724294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49786353
transcript_13613.known	chr1	+	2553	3	FSM	ENSG00000160679.13	ENST00000495554.1	2553	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	377.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTTGTTTTTGT	-2	True	NA	-94	True	NA	NA	NA	153634074	153645470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153638449_153645063
transcript_13614.known	chr1	-	579	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	23	True	NA	-25	True	AATAAA	-17	NA	153627268	153618803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153619039_153626319_153626534_153627138
transcript_136140.known	chr3	+	1033	2	FSM	ENSG00000185614.7	ENST00000333323.6	1033	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCTCCATACCCCT	-13	True	NA	NA	False	AATAAA	-17	NA	49803260	49805030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49803444_49804180
transcript_136144.known	chr3	-	2023	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	12.4146062756574	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-16	True	NA	-15	True	AATAAA	-19	NA	49856564	49828600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_136146.known	chr3	-	1475	12	FSM	ENSG00000164076.17	ENST00000466940.5	1475	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	121.279882574792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGCAGGAGGGTGG	6	True	NA	NA	False	NA	NA	NA	49869909	49859292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861449_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_13615.known	chr1	-	710	4	FSM	ENSG00000189171.15	ENST00000440685.7	710	4	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	220.467684706852	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCCATCCTGATTTCTT	-4	True	NA	-8	True	AATAAA	-34	NA	153628248	153618786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153619039_153626319_153626534_153627482_153627599_153628120
transcript_136151.known	chr3	-	2905	12	FSM	ENSG00000164076.17	ENST00000488336.5	2905	12	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_6	89.1630505690382	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	9	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136153.known	chr3	-	1589	12	FSM	ENSG00000164076.17	ENST00000487726.5	1589	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	118.585185756872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTTCTCACTGTACATA	12	True	NA	NA	False	NA	NA	NA	49869903	49859260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862085_49862177_49862293_49862403_49869757
transcript_13616.known	chr1	-	477	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	109.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	0	True	NA	-20	True	AATAAA	-22	NA	153627505	153618798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153619039_153626319_153626534_153627482
transcript_136164.nic	chr3	-	3159	11	NIC	ENSG00000164076.17	novel	2905	12	NA	NA	-12	0	intron_retention	FALSE	canonical	1	86	junction_6	92.5518233207753	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	NA	False	NA	-15	True	AATAAA	-18	NA	49869947	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136174.known	chr3	-	2818	11	FSM	ENSG00000164076.17	ENST00000463537.5	2818	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.846845221545	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-16	True	NA	-15	True	AATAAA	-18	NA	49869931	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136177.known	chr3	-	2998	11	FSM	ENSG00000164076.17	ENST00000477224.6	2998	11	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_5	86.1940253149834	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	9	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136178.known	chr3	-	1688	11	FSM	ENSG00000164076.17	ENST00000467248.5	1688	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	118.385345376867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTTCTCACTGTACATA	9	True	NA	NA	False	NA	NA	NA	49869906	49859260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862331_49862403_49869757
transcript_13618.known	chr1	-	1852	14	FSM	ENSG00000143621.17	ENST00000361891.9	1852	14	0	0	0	0	multi-exon	FALSE	canonical	3	3292	junction_13	246.555225639086	1871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-11	True	NA	-8	True	AATAAA	-19	NA	153670993	153661787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668558_153669835_153669879_153670170_153670231_153670917
transcript_136183.nic	chr3	-	3312	10	NIC	ENSG00000164076.17	novel	2905	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	176	junction_1	66.407830863536	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-24	True	NA	-15	True	AATAAA	-18	NA	49869939	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136191.nic	chr3	-	3245	10	NIC	ENSG00000164076.17	novel	2998	11	NA	NA	-5	0	intron_retention	FALSE	canonical	1	86	junction_5	89.0505474435727	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-25	True	NA	-15	True	AATAAA	-18	NA	49869940	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136193.known	chr3	-	3157	10	FSM	ENSG00000164076.17	ENST00000475665.5	3157	10	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	52.8667087011182	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCACCCTCTCGCCTTT	12	True	NA	-14	True	AATAAA	-19	NA	49869903	49857987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136197.nic	chr3	-	3402	9	NIC	ENSG00000164076.17	novel	2905	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	176	junction_1	68.6526583607656	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-24	True	NA	-15	True	AATAAA	-18	NA	49869939	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136212.nic	chr3	-	3495	8	NIC	ENSG00000164076.17	novel	2998	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	284	junction_3	46.1421937148238	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-24	True	NA	-15	True	AATAAA	-18	NA	49869939	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136224.known	chr3	-	2913	10	FSM	ENSG00000164076.17	ENST00000296471.11	2913	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	113.907369774255	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	10	True	NA	-15	True	AATAAA	-18	NA	49869905	49857988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860845_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_136225.known	chr3	-	4772	20	FSM	ENSG00000164078.14	ENST00000296474.8	4772	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	4.30293335494099	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAGCAAACAGTGTGAAA	-1	True	NA	-7	True	AATAAA	-27	NA	49903873	49887001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49887563_49889923_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895166_49895374_49895446_49895549_49895714_49895881_49895960_49896108_49896194_49896405_49896539_49896634_49896728_49896891_49897279_49897417_49897519_49897686_49898050_49898212_49898517_49898689_49898866_49898996_49899074_49899264_49902379
transcript_136226.known	chr3	-	4198	19	FSM	ENSG00000164078.14	ENST00000344206.8	4198	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	4.61345322045038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCTCACTCCACAGAGT	2500	False	NA	NA	False	NA	NA	NA	49903609	49887164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49887563_49889923_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895166_49895374_49895446_49895549_49895714_49895881_49896194_49896405_49896539_49896634_49896728_49896891_49897279_49897417_49897519_49897686_49898050_49898212_49898517_49898689_49898866_49898996_49899074_49899264_49902379
transcript_136232.known	chr3	-	3708	6	FSM	ENSG00000164077.15	ENST00000645862.1	3708	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	26.2708964445449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAACCCTGTCTCTAC	335	False	NA	NA	False	NA	NA	NA	49929541	49907159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929368
transcript_136233.known	chr3	-	2370	6	FSM	ENSG00000164077.15	ENST00000296473.8	2025	6	-334	-11	28	11	multi-exon	FALSE	canonical	3	51	junction_3	10.6845683113545	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCACTTGTCCCTT	NA	False	NA	1	True	ATTAAA	-25	NA	49930145	49908861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929608
transcript_136235.known	chr3	-	1617	5	FSM	ENSG00000164077.15	ENST00000455683.7	1617	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	29.3885606997008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGTCAAGCTCTGTC	-13	True	NA	-10	True	ATTAAA	-14	NA	49929889	49908872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49913219_49913360_49929608
transcript_136237.nic	chr3	-	2916	4	NIC	ENSG00000164077.15	novel	2527	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	51	junction_1	11.2644968324772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGTCAAGCTCTGTC	-10	True	NA	-10	True	ATTAAA	-14	NA	49929886	49908872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49910885_49911525_49912012_49913219_49913360_49929608
transcript_136238.known	chr3	-	2431	3	FSM	ENSG00000164077.15	ENST00000486107.5	2431	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTTGTCAAGCTCTG	-13	True	NA	-12	True	ATTAAA	-12	NA	49929889	49908874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49910885_49913219_49913360_49929608
transcript_136241.known	chr3	+	4010	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	189.283279768711	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	-2	True	NA	16	True	AATAAA	-16	NA	49940040	50077248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_136245.known	chr3	+	3630	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_6	172.657927706781	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	-6	True	NA	17	True	AATAAA	-17	NA	49940149	50077249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_136253.nic	chr3	+	3566	20	NIC	ENSG00000004534.15	novel	3630	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_5	183.232229319778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	-18	True	NA	15	True	AATAAA	-15	NA	49940137	50077247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_136258.known	chr3	+	2324	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	202.788584186939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	3	True	NA	16	True	AATAAA	-16	NA	49940101	50077248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_136262.known	chr3	+	2260	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_2	168.99767703655	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	49940006	50077249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_136271.nic	chr3	+	2756	15	ISM	ENSG00000004534.15	ENST00000266022.9	3630	21	-112	15225	-3	852	5prime_fragment	FALSE	canonical	3	224	junction_6	95.1336331865093	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAGTCAAGGAAAGTC	-5	True	NA	-23	True	NA	NA	NA	49940037	50062024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961
transcript_136283.known	chr3	+	581	2	FSM	ENSG00000004534.15	ENST00000493652.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGAGCTTGCAGTGAGC	-2	True	NA	NA	False	NA	NA	NA	49940096	49963027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575
transcript_136284.known	chr3	+	3177	25	FSM	ENSG00000003756.17	ENST00000347869.8	3177	25	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	56.3556261363692	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTGGTGATGAAATCA	-22	True	NA	86	True	NA	NA	NA	50088918	50119021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_136291.nic	chr3	+	3046	24	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_5	64.5359471055401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	NA	False	NA	22	True	AAGAAA	-10	NA	50088911	50118957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_136295.nnic	chr3	+	2898	23	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	81.6279227262034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	NA	False	NA	22	True	AAGAAA	-10	NA	50088911	50118957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50105076_50105143_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_136307.known	chr3	+	2716	5	FSM	ENSG00000003756.17	ENST00000469838.5	2716	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	25.6356685108854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTCCTGTTAAATGAAG	-22	True	NA	NA	False	AAAAAG	-5	NA	50088918	50102194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981
transcript_136311.known	chr3	+	2953	16	FSM	ENSG00000188338.15	ENST00000614032.5	2953	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	2.86278807381119	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTAGTAGTCCCTGTG	5	True	NA	NA	False	AATAAA	-1	NA	50205270	50221486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50205349_50214148_50214301_50214401_50214484_50214652_50214769_50215385_50215460_50215543_50215637_50215739_50215822_50217237_50217321_50217414_50217474_50217675_50217841_50217916_50217997_50218269_50218371_50218592_50218718_50218803_50218949_50219880_50219985_50220072
transcript_136316.known	chr3	+	2407	9	FSM	ENSG00000114353.17	ENST00000422163.5	2407	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	336.170250765888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTGCAAAT	0	True	NA	15	True	AGTAAA	-3	NA	50226291	50258898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50227194_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_136318.known	chr3	+	2219	9	FSM	ENSG00000114353.17	ENST00000313601.11	2219	9	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_1	71.2915449054094	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGGTATTCTCTCCCA	-5	True	NA	15	True	AATAAA	-28	NA	50236203	50259362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_136324.known	chr3	+	2625	2	FSM	ENSG00000230454.1	ENST00000439898.1	2625	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGGTGTGTGCCTGGA	1322	False	NA	NA	False	AATACA	-14	NA	50260302	50263358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50262536_50262966
transcript_136325.known	chr3	+	430	2	FSM	ENSG00000230454.1	ENST00000426302.1	430	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGACCTCCATTTT	2252	False	NA	NA	False	NA	NA	NA	50261232	50263312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50261317_50262966
transcript_136338.known	chr3	+	2925	18	FSM	ENSG00000012171.20	ENST00000618865.4	2925	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	11.9250833312287	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGAATGGCCCCAGC	-28	True	NA	6	True	AATAAA	-14	NA	50267607	50277139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50267770_50269160_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273912_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
transcript_136344.known	chr3	-	1943	12	FSM	ENSG00000214706.12	ENST00000417626.8	1943	12	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	34.2861078293038	3909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGGTATTTTTCTGTT	-6	True	NA	-2	True	ATTAAA	-29	NA	50292429	50287731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50288272_50288408_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_136364.nic	chr3	-	2142	11	NIC	ENSG00000214706.12	novel	2275	15	NA	NA	-66	0	intron_retention	FALSE	canonical	3	656	junction_3	31.3872585613972	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTAACCCCTGGGT	6910	False	NA	-13	True	ATTAAA	-18	NA	50292502	50287742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_13640.known	chr1	+	1003	4	FSM	ENSG00000143553.11	ENST00000368685.6	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	38.4736562107401	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGTTCCAGGAGTTT	-12	True	NA	42	True	AATAAA	-35	NA	153658702	153661852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153658887_153659137_153659185_153659447_153659567_153661199
transcript_13641.known	chr1	+	922	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	219	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTAGTTTACTCTGGT	-1	True	NA	19	True	AATAAA	-12	NA	153658713	153661829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153658887_153659447_153659567_153661199
transcript_13644.known	chr1	+	4185	22	FSM	ENSG00000169418.10	ENST00000368680.4	4185	22	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_9	7.48513265642993	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTCTTCTTGAGGGA	0	True	NA	27	True	ATTAAA	-17	NA	153678687	153693992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153679830_153680500_153680701_153681179_153681294_153681703_153681840_153682497_153682590_153683375_153683512_153683739_153683825_153684963_153685085_153685805_153685881_153686122_153686201_153686645_153686751_153687015_153687088_153687199_153687357_153687633_153687790_153688052_153688222_153688952_153689100_153689187_153689312_153689452_153689522_153689805_153689981_153690283_153690383_153693105_153693198_153693351
transcript_136476.known	chr3	-	1696	4	FSM	ENSG00000186792.17	ENST00000621157.5	1696	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	12.657891697365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	4742	False	NA	-5	True	CATAAA	-18	NA	50298831	50292831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50298820
transcript_136478.known	chr3	-	1878	4	FSM	ENSG00000186792.17	ENST00000336307.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	7.87400787401181	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	7	True	NA	-5	True	CATAAA	-18	NA	50299405	50292831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50299212
transcript_136482.known	chr3	-	1402	3	FSM	ENSG00000186792.17	ENST00000450982.6	1402	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	4341	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50293516_50294708_50295620_50299212
transcript_136484.known	chr3	-	583	3	FSM	ENSG00000243477.6	ENST00000452674.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTGACTCTGGATCCT	-20	True	NA	NA	False	NA	NA	NA	50298889	50297435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50297673_50297806_50298084_50298820
transcript_136486.known	chr3	-	891	2	FSM	ENSG00000214706.12	ENST00000462001.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGTTTCACAGCCTG	-13	True	NA	NA	False	NA	NA	NA	50292436	50290008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50290680_50292216
transcript_136487.known	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-4	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50297528_50299212
transcript_136488.known	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	7	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50297673_50299212
transcript_136489.known	chr3	-	1820	2	FSM	ENSG00000243477.6	ENST00000443842.1	1820	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGCTCAGAGCCGTC	12	True	NA	-54	True	NA	NA	NA	50299400	50296451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50298084_50299212
transcript_136490.known	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-1	True	NA	-3	True	AATAAA	-15	NA	50303574	50299892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
transcript_136491.known	chr3	-	1522	3	FSM	ENSG00000114378.17	ENST00000395143.6	1522	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATAAGGAGTTAGAACC	0	True	NA	NA	False	NA	NA	NA	50303573	50300310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50300801_50302056_50302981_50303465
transcript_136492.known	chr3	-	2517	3	FSM	ENSG00000114378.17	ENST00000266031.8	2517	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTACTGAGCGCCTA	1	True	NA	0	True	AATAAA	-18	NA	50303572	50299889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50300801_50300987_50301078_50302056
transcript_136499.known	chr3	-	2318	5	FSM	ENSG00000068001.14	ENST00000442581.1	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	238.654954903518	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCTGCTTGGATTTT	9323	False	NA	-29	True	ATTAAA	-12	NA	50322777	50317811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50321365_50321774_50322652
transcript_136504.known	chr3	-	1882	4	FSM	ENSG00000068001.14	ENST00000357750.9	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	247.3715154715	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTGGATTTTGTAC	-2	True	NA	-25	True	ATTAAA	-16	NA	50322745	50317807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50322652
transcript_136506.known	chr3	-	790	4	FSM	ENSG00000114383.10	ENST00000421918.1	790	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	326.411805342066	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	9993	False	NA	-47	True	AATAAA	-2	NA	50328251	50326007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326356_50326478_50327027_50327220_50327953
transcript_136508.known	chr3	-	735	4	FSM	ENSG00000114383.10	ENST00000454201.5	735	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	326.221124733243	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	4	True	NA	-47	True	AATAAA	-2	NA	50328206	50326007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326356_50326478_50327037_50327220_50327953
transcript_136513.known	chr3	-	1513	3	FSM	ENSG00000068001.14	ENST00000481597.5	1513	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	279.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGAGGCAGCTGACCCT	2	True	NA	NA	False	NA	NA	NA	50322741	50318588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50319046_50319568_50320536_50322652
transcript_136514.known	chr3	-	1669	3	FSM	ENSG00000114383.10	ENST00000232496.5	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	12	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGTGGCATCCTGTG	-13	True	NA	-4	True	AATAAA	-20	NA	50328223	50324908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326356_50326478_50327953
transcript_136517.known	chr3	-	475	3	FSM	ENSG00000114383.10	ENST00000463304.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	380	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCGGCAAGAAACTCCCA	-28	True	NA	-129	True	NA	NA	NA	50328238	50326089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326384_50326478_50327953
transcript_136521.known	chr3	-	4054	3	FSM	ENSG00000068001.14	ENST00000447092.5	4054	3	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	38.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGGCTAAAGTGTATGC	9318	False	NA	-7	True	ATTAAA	-34	NA	50322782	50317789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50318540_50318955_50319046_50319568
transcript_136524.nnic	chr3	-	1635	6	NNC	ENSG00000068028.18	novel	1657	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.8167430582536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-5	True	NA	-12	True	AATAAA	-14	NA	50337452	50329787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_50330507_50330610_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
transcript_136525.known	chr3	-	1847	6	FSM	ENSG00000068028.18	ENST00000359365.9	1847	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	48.9219787007844	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-7	True	NA	-12	True	AATAAA	-14	NA	50340836	50329787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337904_50338012_50340555
transcript_136527.known	chr3	-	1757	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	12.4774797134678	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAATCTTTTATACAT	8280	False	NA	-6	True	AATAAA	-20	NA	50337464	50329781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
transcript_136528.known	chr3	-	1745	5	FSM	ENSG00000068028.18	ENST00000395117.6	1745	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.7295036054405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-12	True	NA	-12	True	AATAAA	-14	NA	50340841	50329787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50340555
transcript_136530.known	chr3	+	790	1	FSM	ENSG00000281358.1	ENST00000629828.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGCTTTTGTCAC	NA	False	NA	NA	False	ATTAAA	-18	NA	50337510	50338300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50337500_50338300
transcript_136531.known	chr3	-	1774	12	FSM	ENSG00000004838.14	ENST00000231749.8	1774	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.7721444263289	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGTATCTCCGCGTGGT	5406	False	50345744	NA	False	AGTAAA	-16	NA	50345732	50341111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50341486_50341573_50341700_50341809_50341932_50342014_50342141_50342396_50342570_50342917_50343019_50343117_50343207_50343306_50343445_50343562_50343617_50343733_50343851_50345123_50345233_50345487
transcript_136533.known	chr3	-	1542	11	FSM	ENSG00000114388.14	ENST00000232501.8	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	23.2036635038521	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCTGATGCGGTGACTC	-13	True	NA	NA	False	AATAAA	-44	NA	50350775	50347329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930_50350023_50350574
transcript_136534.nic	chr3	-	1967	10	ISM	ENSG00000114388.14	ENST00000232501.8	1542	11	-34	161	0	0	intron_retention	FALSE	canonical	3	152	junction_9	23.9371605317128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATTGAGTGCTGTT	-47	True	NA	-7	True	AATAAA	-17	NA	50350809	50347490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930
transcript_136538.known	chr3	-	1573	10	FSM	ENSG00000114388.14	ENST00000433381.5	1573	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	81.9246868836717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAATAAAGACATCCAT	-19	True	NA	-34	True	NA	NA	NA	50350781	50347517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349491_50349664_50349829_50349930_50350023_50350574
transcript_136544.known	chr3	-	1747	9	FSM	ENSG00000114388.14	ENST00000451194.5	1747	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	60.2821490990492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATTGAGTGCTGTT	8	True	NA	-7	True	AATAAA	-17	NA	50350754	50347490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349829_50349930_50350023_50350574
transcript_13656.known	chr1	+	5252	30	FSM	ENSG00000143624.14	ENST00000318967.7	5252	30	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	62.1395001524106	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTGGCCCCAATT	-14	True	NA	11	True	ATTAAA	-17	NA	153728049	153774808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
transcript_136562.known	chr3	-	1905	10	FSM	ENSG00000114388.14	ENST00000479512.5	1905	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	88.4865896235688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAACAGCCTTTATTGA	-4	True	NA	-15	True	AATAAA	-9	NA	50350766	50347498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349491_50349664_50349829_50349932
transcript_136563.known	chr3	-	1371	11	FSM	ENSG00000114388.14	ENST00000667046.1	1371	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	83.9505211419203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCTGTAAATAAAGACAT	8730	False	NA	-38	True	NA	NA	NA	50350826	50347521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348710_50348783_50348873_50349011_50349385_50349491_50349664_50349834_50349930_50350023_50350574
transcript_136564.known	chr3	+	1225	4	FSM	ENSG00000114395.11	ENST00000232508.9	1225	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.0015014862687	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-21	True	NA	13	True	AGTAAA	-15	NA	50350844	50354069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50350985_50351342_50351561_50352008_50352047_50353240
transcript_136565.known	chr3	+	1142	4	FSM	ENSG00000114395.11	ENST00000425346.6	1142	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.0015014862687	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-4	True	NA	13	True	AGTAAA	-15	NA	50350861	50354069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50350985_50351408_50351561_50352008_50352047_50353240
transcript_136568.known	chr3	+	590	3	FSM	ENSG00000271858.5	ENST00000606259.5	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCTGCGTGATGCCC	-19	True	NA	NA	False	NA	NA	NA	50365333	50367845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50365839_50366296_50366332_50367795
transcript_136569.known	chr3	+	1004	3	FSM	ENSG00000271858.5	ENST00000607121.5	1004	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	21	True	NA	12	True	AATAAA	-18	NA	50365373	50368197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50365941_50366296_50366332_50367795
transcript_136571.known	chr3	+	511	2	FSM	ENSG00000271858.5	ENST00000607088.5	511	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	870	False	NA	12	True	AATAAA	-18	NA	50366222	50368197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50366332_50367795
transcript_136572.known	chr3	+	459	2	FSM	ENSG00000271858.5	ENST00000607362.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	2112	False	NA	12	True	AATAAA	-18	NA	50367464	50368197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50367522_50367795
transcript_136573.known	chr3	-	2107	2	FSM	ENSG00000126062.4	ENST00000266025.4	2107	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTCTTGTCAGGC	-11	True	NA	-21	True	AATAAA	-20	NA	50359521	50354749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50355548_50358212
transcript_136574.known	chr3	+	1533	3	FSM	ENSG00000114395.11	ENST00000418577.1	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGGAGAGAAAAAAGT	-8	True	NA	-24	True	NA	NA	NA	50350857	50354032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50351561_50352008_50352047_50353240
transcript_136575.known	chr3	+	910	3	FSM	ENSG00000271858.5	ENST00000606665.5	910	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	32	False	NA	12	True	AATAAA	-18	NA	50365384	50368197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50365858_50366296_50366332_50367795
transcript_136581.known	chr3	+	16993	11	FSM	ENSG00000114735.10	ENST00000232854.9	16993	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.2702893201424	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGCATTCCCATTTT	18	True	NA	NA	False	AATAAA	-13	NA	50569521	50596166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_136582.nnic	chr3	+	2686	11	NNC	ENSG00000114735.10	novel	16993	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	23.8379948821204	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACCTAATGTTTTGTC	-19	True	NA	15	True	AGTAAA	-20	NA	50569152	50580676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50579741_50579843_50579940_50580115_50580230_50580380
transcript_136583.known	chr3	+	1499	11	FSM	ENSG00000114735.10	ENST00000455834.5	1499	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	21.6185105869947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTGACCTAATGTTT	-11	True	NA	11	True	AGTAAA	-16	NA	50569492	50580672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50569546_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_136597.known	chr3	-	2657	6	FSM	ENSG00000088543.15	ENST00000357203.8	2657	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	21.811923344813	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGAGCCTGTGACG	3	True	NA	-2	True	ATTAAA	-26	NA	50567747	50558024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565862_50566005_50566095_50567462
transcript_136600.nic	chr3	-	2422	5	NIC	ENSG00000088543.15	novel	2365	5	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	23.9478600296561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAGAGTGTGTGAGCC	-19	True	NA	-9	True	ATTAAA	-19	NA	50567769	50558031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565701_50567462
transcript_136601.known	chr3	-	2486	5	FSM	ENSG00000088543.15	ENST00000426034.5	2486	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	19.1180542943052	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGAGCCTGTGACG	12	True	NA	-2	True	ATTAAA	-26	NA	50567665	50558024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565862_50567462
transcript_136603.known	chr3	-	565	5	FSM	ENSG00000088543.15	ENST00000484982.1	565	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.2726093108393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCCCTGATTGTCAAG	3374	False	NA	NA	False	NA	NA	NA	50567625	50559598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50566005_50566095_50567462
transcript_136606.known	chr3	-	788	4	FSM	ENSG00000088543.15	ENST00000486175.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	23.7954243967663	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGAGGTTTCCCTCTGTT	3378	False	NA	NA	False	NA	NA	NA	50567621	50559282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50567462
transcript_136612.known	chr3	+	2500	11	FSM	ENSG00000114738.11	ENST00000357955.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	34.230980120353	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	17	True	NA	35	True	AATAAA	-16	NA	50617169	50649288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50617227_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_136621.known	chr3	-	2019	3	FSM	ENSG00000114737.16	ENST00000348721.4	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCCCTCAATGGGGCCG	-3	True	NA	-34	True	AATAAA	-18	NA	50611774	50606488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50608143_50608372_50608594_50611630
transcript_136622.known	chr3	+	846	5	FSM	ENSG00000145050.19	ENST00000446668.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	355.368118997751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCTGTTGCTGGTGT	67	False	NA	-65	True	NA	NA	NA	51385356	51389262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51385437_51386207_51386336_51386908_51387047_51387736_51387879_51388904
transcript_136623.known	chr3	+	909	4	FSM	ENSG00000145050.19	ENST00000528157.7	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_1	26.106618998935	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCTGCTTTCCAGTT	1	True	NA	70	True	NA	NA	NA	51385290	51389397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51385437_51386207_51386336_51387736_51387879_51388904
transcript_136626.known	chr3	-	5649	25	FSM	ENSG00000145041.16	ENST00000684031.1	5649	25	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_23	55.5858788772432	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTTTCCCTATTTTC	-29	True	NA	-14	True	AATAAA	-20	NA	51500015	51397841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51496733_51496781_51499872
transcript_136627.nic	chr3	-	5620	24	ISM	ENSG00000145041.16	ENST00000423656.5	5946	25	-39	1975	-18	0	5prime_fragment	FALSE	canonical	3	75	junction_23	50.9342954939687	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTTTCCCTATTTTC	5605	False	NA	-14	True	AATAAA	-20	NA	51500033	51397841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51499872
transcript_136631.known	chr3	+	6624	1	FSM	ENSG00000259956.2	ENST00000563281.2	6624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGATTTGTAATTTC	-5	True	NA	15	True	AATAAA	-23	NA	51391284	51397908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51391300_51397900
transcript_136635.nnic	chr3	+	4990	24	NNC	ENSG00000164080.14	novel	9957	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.4275346336535	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	51538710	51663594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51538916_51541588_51541651_51572824_51572916_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_136636.nnic	chr3	+	5107	24	NNC	ENSG00000164080.14	novel	9957	23	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.6932742871859	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51538684	51663594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51538916_51541497_51541651_51572824_51572916_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_136642.known	chr3	+	9957	23	FSM	ENSG00000164080.14	ENST00000684192.1	9957	23	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	11.7434701391493	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGTGTTGTTTGATC	-6	True	NA	12	True	AATAAA	-13	NA	51538718	51668660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51538916_51541588_51541651_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_136647.nnic	chr3	+	5016	23	NNC	ENSG00000164080.14	novel	9957	23	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	12.1591546302493	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51538684	51663594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51538916_51541497_51541651_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_136651.nnic	chr3	+	5046	22	NIC	ENSG00000164080.14	novel	9957	23	NA	NA	-217	0	combination_of_known_splicesites	TRUE	canonical	3	27	junction_1	7.73923068592592	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51538501	51663594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_51538916_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_136655.known	chr3	+	1488	6	FSM	ENSG00000164081.13	ENST00000611400.4	1488	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	60.2441698424005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51672209_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_136658.known	chr3	+	1448	6	FSM	ENSG00000164081.13	ENST00000457573.5	1448	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	65.2184023110042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51672340_51672393_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_136663.known	chr3	+	1320	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	38.1149576937978	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTGTATTTGTTT	16	True	NA	16	True	AATAAA	-28	NA	51671251	51704323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_136665.known	chr3	+	2290	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	52.3563510951632	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGAATAAAGCCAATG	19	True	NA	-24	True	NA	NA	NA	51671254	51704283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_136666.known	chr3	+	1313	5	FSM	ENSG00000164081.13	ENST00000416589.5	1313	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.4369413748722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	60	False	NA	10	True	AATAAA	-22	NA	51671295	51704317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671332_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_136668.known	chr3	+	1174	4	FSM	ENSG00000164081.13	ENST00000614067.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	57.9271573232759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51674270_51674563_51699405_51699575_51703723
transcript_136669.known	chr3	+	800	4	FSM	ENSG00000164081.13	ENST00000489026.5	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	62.744632351213	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGCACCCTCCTGC	4964	False	NA	NA	False	NA	NA	NA	51671174	51704018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51684412_51684635_51699405_51699575_51703723
transcript_136672.nnic	chr3	+	2235	5	NNC	ENSG00000164082.15	novel	3356	6	NA	NA	-11	0	intron_retention	FALSE	canonical	1	3	junction_1	11.6484977572217	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	-17	True	NA	48	True	AATAAA	-20	NA	51707056	51718613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51707168_51713018_51713311_51715061_51716138_51717636_51717818_51718038
transcript_136675.known	chr3	+	1910	4	FSM	ENSG00000164082.15	ENST00000475478.5	1910	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	8.28653526310404	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	16	True	NA	48	True	AATAAA	-20	NA	51707089	51718613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51707168_51715061_51716138_51717636_51717818_51718038
transcript_136676.nnic	chr3	+	1860	4	NNC	ENSG00000164082.15	novel	1910	4	NA	NA	-24	0	intron_retention	FALSE	canonical	1	1	junction_1	14.1970262926979	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	687	False	NA	48	True	AATAAA	-20	NA	51707043	51718613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51707168_51715157_51716138_51717636_51717818_51718038
transcript_136677.known	chr3	+	3356	6	FSM	ENSG00000164082.15	ENST00000395052.8	3356	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.6378692207809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	-6	True	NA	48	True	AATAAA	-20	NA	51707067	51718613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51707168_51708847_51709434_51712472_51713311_51715061_51716138_51717636_51717818_51718038
transcript_136681.known	chr3	-	1542	15	FSM	ENSG00000114767.7	ENST00000232888.7	1542	15	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_9	31.2716863527847	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-8	True	NA	-7	True	ATTAAA	-18	NA	51941904	51933428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_136683.nnic	chr3	-	1606	15	NNC	ENSG00000114767.7	novel	1542	15	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	120.53062952238	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-5	True	NA	-7	True	ATTAAA	-18	NA	51941941	51933428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936583_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_1367.known	chr1	+	486	3	FSM	ENSG00000197530.13	ENST00000463492.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	36	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	77	False	NA	16	True	AATAAA	-27	NA	1615967	1617323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1616101_1616507_1616615_1617077
transcript_13670.known	chr1	+	2298	10	FSM	ENSG00000143554.14	ENST00000624995.4	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	21.5240319321749	1042	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTCATTATCTCTCT	10	True	NA	51	True	AATAAA	-37	NA	153775406	153780157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153776165_153776517_153776728_153777061_153777221_153777760_153777886_153778160_153778356_153778462_153778554_153778686_153778886_153779113_153779212_153779342_153779474_153779825
transcript_136714.known	chr3	+	2472	12	FSM	ENSG00000041880.15	ENST00000417220.6	2472	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTGAATGGTACTC	-23	True	NA	19	True	CATAAA	-20	NA	51942344	51948862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51942709_51942929_51943047_51943348_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_136716.known	chr3	+	2337	11	FSM	ENSG00000041880.15	ENST00000398755.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.55105618091294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAATGGTACTCTGTTA	-5	True	NA	24	True	CATAAA	-25	NA	51942362	51948867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51942709_51943353_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_136718.known	chr3	+	2393	11	FSM	ENSG00000041880.15	ENST00000471971.6	2393	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.92428337406972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTATAGTCACCATGCT	9	True	NA	NA	False	AATACA	-12	NA	51942376	51948594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51943047_51943348_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_136721.known	chr3	+	1952	10	FSM	ENSG00000041880.15	ENST00000498510.2	1952	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAGGGCAGCTTTTATA	-6	True	NA	NA	False	NA	NA	NA	51943249	51948724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_136727.known	chr3	+	1836	17	FSM	ENSG00000114786.16	ENST00000463721.5	1836	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	112.874377074693	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTACTAACACAAGGACAC	1079	False	NA	24	True	AATAAA	-24	NA	51975049	51989183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51975205_51977870_51978083_51978258_51978375_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_136734.known	chr3	+	1422	15	FSM	ENSG00000243989.9	ENST00000636358.2	1422	15	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	25.176114368462	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	37	True	NA	38	True	AATAAA	-38	NA	51983534	51989197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_136746.nic	chr3	-	2168	15	NIC	ENSG00000090097.22	novel	2009	14	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_12	68.7016991739488	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	7399	False	NA	-14	True	AATAAA	-16	NA	51968440	51957457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51962809_51962893_51967325_51967435_51968343
transcript_136755.known	chr3	+	1457	14	FSM	ENSG00000243989.9	ENST00000636880.1	1457	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	89.215847558723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	92	False	NA	38	True	AATAAA	-38	NA	51983434	51989197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_136756.known	chr3	+	1409	14	FSM	ENSG00000243989.9	ENST00000476351.5	1409	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	85.8760631657744	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985400_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_136761.known	chr3	-	2156	14	FSM	ENSG00000090097.22	ENST00000461554.6	2156	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	58.8152256582491	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-7	True	NA	-14	True	AATAAA	-16	NA	51967454	51957457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325
transcript_136765.nic	chr3	-	2085	14	NIC	ENSG00000090097.22	novel	2156	14	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_13	47.6306052471834	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	7399	False	NA	-14	True	AATAAA	-16	NA	51968440	51957457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325_51967435_51968343
transcript_136770.known	chr3	+	1319	13	FSM	ENSG00000243989.9	ENST00000476854.5	1319	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	95.443809821975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_136777.known	chr3	-	2015	13	FSM	ENSG00000090097.22	ENST00000355852.6	2015	13	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_12	28.3709309368273	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-10	True	NA	-10	True	AATAAA	-20	NA	51967457	51957453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
transcript_136787.nic	chr3	-	1852	13	NIC	ENSG00000090097.22	novel	1784	13	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	53.9866238577257	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTTTTTGAATA	8307	False	NA	-51	True	NA	NA	NA	51967532	51957494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958153_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
transcript_136794.nic	chr3	-	1957	12	NIC	ENSG00000090097.22	novel	2156	14	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	56.9440787015959	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	8307	False	NA	-14	True	AATAAA	-16	NA	51967532	51957457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
transcript_1368.known	chr1	+	584	3	FSM	ENSG00000197530.13	ENST00000511910.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	205	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	82	False	NA	13	True	TATAAA	-15	NA	1629105	1630603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1629312_1629638_1629705_1630291
transcript_136806.known	chr3	+	1066	5	FSM	ENSG00000248487.10	ENST00000273596.8	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	10.8857705285386	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGGTTCCGTTTCCTG	-5	True	NA	12	True	AATAAA	-26	NA	51975063	51981196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51975205_51977870_51978083_51978258_51978375_51980392_51980629_51980835
transcript_136808.known	chr3	-	1818	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.56846672960488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGCAATTAGACCCCA	-4	True	NA	-27	True	NA	NA	NA	51974031	51968529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
transcript_136809.known	chr3	+	781	2	FSM	ENSG00000243989.9	ENST00000496679.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGGCTGGCAGATTGCT	-3	True	NA	NA	False	NA	NA	NA	51983339	51984577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046
transcript_136811.known	chr3	+	2119	1	FSM	ENSG00000180929.6	ENST00000322241.6	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGAGTGTCTGCTGC	-16	True	NA	NA	False	AAAACA	-14	NA	51955380	51957499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51955400_51957500
transcript_136812.known	chr3	-	1964	13	FSM	ENSG00000090097.22	ENST00000322099.11	1964	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	50.0734876623016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGTGAAATACTGGTGT	6507	False	NA	-12	True	AATAAA	-18	NA	51962892	51957455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51962809
transcript_136813.known	chr3	-	1657	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.8878405775519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-22	True	NA	-12	True	AATAAA	-15	NA	51974049	51968514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
transcript_136814.known	chr3	-	713	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	3616.91203468742	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	566	False	NA	-34	True	AATAAA	-12	NA	51995844	51993628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
transcript_136815.known	chr3	-	537	4	FSM	ENSG00000162244.12	ENST00000492277.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3690.89296632792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTCTGCCAACATGAG	596	False	NA	NA	False	NA	NA	NA	51995814	51993749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995764
transcript_136816.known	chr3	-	551	4	FSM	ENSG00000162244.12	ENST00000475248.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_3	3656.49404028868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGTGCGACCCCCCAC	595	False	NA	-128	True	NA	NA	NA	51995815	51993722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995778
transcript_136817.known	chr3	-	719	5	FSM	ENSG00000162244.12	ENST00000480306.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3214.55148504422	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	1	True	NA	-33	True	AATAAA	-13	NA	51995881	51993627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51994772_51994858_51995041_51995107_51995424_51995470_51995856
transcript_136829.known	chr3	-	1936	11	FSM	ENSG00000164087.8	ENST00000296484.7	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	37.6409351637283	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-16	True	NA	8	True	ATTAAA	-43	NA	52154423	52075225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_136830.known	chr3	-	1760	11	FSM	ENSG00000164087.8	ENST00000474012.1	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	70.9707686304721	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGTTTTCTCTAAATCT	3	True	NA	NA	False	NA	NA	NA	52154404	52075453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
transcript_136836.nnic	chr3	-	2178	10	NIC	ENSG00000164087.8	novel	1936	11	NA	NA	-74	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_2	72.3777811892334	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	NA	False	NA	8	True	ATTAAA	-43	NA	52154764	52075225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52075986_52096568_52096713_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_136839.known	chr3	-	1999	10	FSM	ENSG00000164087.8	ENST00000394970.6	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	49.7946400011036	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	15	False	NA	-52	True	NA	NA	NA	52154690	52075285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_136840.nic	chr3	-	2092	10	NIC	ENSG00000164087.8	novel	1999	10	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	80.2183747923192	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	NA	False	NA	-52	True	NA	NA	NA	52154712	52075285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
transcript_136843.nnic	chr3	-	2007	9	NIC	ENSG00000164087.8	novel	1999	10	NA	NA	-74	-27	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	78.103196957615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGCAGGAGTGGCTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	52154764	52075252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52075986_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_136850.known	chr3	+	2375	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	98.3040484945214	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	-2	True	NA	33	True	AATAAA	-18	NA	52198159	52214327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_136851.known	chr3	+	2212	11	FSM	ENSG00000023330.15	ENST00000310271.6	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.6262772003521	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	5	True	NA	30	True	AATAAA	-15	NA	52198131	52214324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52198256_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_136858.known	chr3	+	2125	11	FSM	ENSG00000023330.15	ENST00000469224.5	2125	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	41.1690417668422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGACCTCAATTATTTCA	3985	False	NA	NA	False	NA	NA	NA	52198085	52214180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52198256_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_136859.known	chr3	+	2231	10	FSM	ENSG00000164088.18	ENST00000323588.9	2231	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.18544972870135	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGAGTCATGAATTG	-11	True	NA	27	True	ATTAAA	-17	NA	52245758	52250599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52246049_52246694_52246813_52246973_52247229_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_136865.known	chr3	-	1558	9	FSM	ENSG00000247596.10	ENST00000678549.1	1558	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	181.162176998953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232097_52235028_52235107_52238991
transcript_136866.known	chr3	-	1579	9	FSM	ENSG00000247596.10	ENST00000676989.1	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	175.608762594581	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232118_52235028_52235107_52238991
transcript_136870.known	chr3	-	1426	8	FSM	ENSG00000247596.10	ENST00000678838.1	1426	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	189.879231220741	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-26	True	NA	-20	True	AATAAA	-16	NA	52239149	52228611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52235028_52235107_52238991
transcript_136873.known	chr3	-	2366	8	FSM	ENSG00000247596.10	ENST00000676800.1	2366	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_6	35.3813048755113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATTTTCTAAAGAATAAA	-23	True	NA	-55	True	NA	NA	NA	52239146	52228646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
transcript_136876.known	chr3	-	1997	8	FSM	ENSG00000247596.10	ENST00000678330.1	1997	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_6	33.4822523807732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGGGCTGGGGCAGGG	-42	False	NA	-103	True	NA	NA	NA	52239165	52228694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
transcript_136886.known	chr3	+	1790	9	FSM	ENSG00000164088.18	ENST00000409502.7	1790	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	10.4133327998293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTGTGAGTCATGAAT	2	True	NA	25	True	ATTAAA	-15	NA	52246208	52250597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52246315_52246694_52246813_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_136887.known	chr3	-	1531	8	FSM	ENSG00000247596.10	ENST00000678352.1	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	34.4164175346355	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-1	True	NA	-20	True	AATAAA	-16	NA	52235190	52228611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028
transcript_136888.known	chr3	+	1101	2	FSM	ENSG00000243224.1	ENST00000483834.1	1101	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTTGTGTTGTATACT	1	True	NA	NA	False	AATGAA	-7	NA	52239257	52241097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52239436_52240174
transcript_136890.known	chr3	-	4286	9	FSM	ENSG00000164091.12	ENST00000296490.8	4286	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	5.3619026473818	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGCTGCAGCCTCTT	-11	True	NA	-22	True	TATAAA	-32	NA	52278649	52254433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52257520_52258535_52258679_52259196_52259267_52259716_52259873_52260384_52260502_52261379_52261480_52266951_52267019_52270711_52270810_52278200
transcript_136893.nic	chr3	+	1438	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_5	7.56453714527348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	9985	False	NA	6	True	AATAAA	-14	NA	52287804	52293471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_136897.known	chr3	+	992	6	FSM	ENSG00000168237.18	ENST00000471180.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	5.88557558782486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	7	True	NA	6	True	AATAAA	-14	NA	52287834	52293471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_136899.known	chr3	+	3791	5	FSM	ENSG00000168237.18	ENST00000436784.7	3791	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	7.04893608993584	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTCCCTTGCTCTTG	0	True	NA	10	True	CATAAA	-22	NA	52287827	52295257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259
transcript_136913.nic	chr3	+	2201	4	ISM	ENSG00000168237.18	ENST00000436784.7	3791	5	2235	1782	-11	0	3prime_fragment	FALSE	canonical	3	19	junction_2	3.85861230093008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	-10	True	NA	10	True	AATAAA	-18	NA	52290062	52293475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_52290720_52290959_52291112_52291746_52291923_52292259
transcript_136914.known	chr3	+	2083	4	FSM	ENSG00000168237.18	ENST00000489173.1	2083	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.93310961716756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	611	False	NA	10	True	AATAAA	-18	NA	52290683	52293475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52290720_52290959_52291923_52292259_52293175_52293306
transcript_136919.known	chr3	+	1304	3	FSM	ENSG00000168237.18	ENST00000477382.1	1304	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCACAATGACTCACATA	241	False	NA	NA	False	NA	NA	NA	52290313	52293005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52290720_52290959_52291112_52292259
transcript_136924.known	chr3	-	3600	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_9	50.3636773875776	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-3	True	NA	17	True	AATAAA	-26	NA	52410008	52401007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_136925.known	chr3	-	3434	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	81.7602248957279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	618	False	NA	-1	True	AATAAA	-8	NA	52409914	52401025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_136926.known	chr3	+	2127	11	FSM	ENSG00000010318.22	ENST00000327906.8	2127	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	13.0460722058403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCTCCTTATAAATT	1	True	NA	8	True	AATAAA	-14	NA	52410659	52423641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52419832_52419935_52420310_52420436_52420902_52421063_52421647_52421755_52422221_52422339_52422759_52422882_52423090
transcript_136927.nic	chr3	+	2274	10	NIC	ENSG00000010318.22	novel	2127	11	NA	NA	-172	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	11.3724814061547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCTCCTTATAAATT	6963	False	NA	8	True	AATAAA	-14	NA	52410487	52423641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495_52414588_52419832_52419935_52420310_52420436_52420902_52421063_52421647_52421755_52422759_52422882_52423090
transcript_136928.known	chr3	+	1472	10	FSM	ENSG00000010318.22	ENST00000347025.6	1472	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	11.3898373588796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTGTCTCCTTATAAAT	458	False	NA	7	True	AATAAA	-13	NA	52411196	52423640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52419832_52419935_52420310_52420436_52420902_52421063_52421647_52421755_52422759_52422882_52423090
transcript_136933.nic	chr3	+	1216	5	NIC	ENSG00000010318.22	novel	576	5	NA	NA	-172	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	13.4605906259718	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	6963	False	NA	NA	False	NA	NA	NA	52410487	52414836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495_52414588_52414727
transcript_136936.known	chr3	+	576	5	FSM	ENSG00000010318.22	ENST00000482327.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	13.7727085208393	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	297	False	NA	NA	False	NA	NA	NA	52411035	52414836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52414727
transcript_136937.known	chr3	+	962	4	FSM	ENSG00000010318.22	ENST00000473145.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.077477638554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	151	False	NA	NA	False	NA	NA	NA	52410889	52414844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495
transcript_136938.nic	chr3	+	1246	4	ISM	ENSG00000010318.22	ENST00000482327.5	576	5	-522	-8	-146	0	intron_retention	FALSE	canonical	3	21	junction_1	10.9848380355227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	-1	True	NA	NA	False	NA	NA	NA	52410513	52414844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495
transcript_136943.known	chr3	-	4993	16	FSM	ENSG00000010319.7	ENST00000231721.7	4993	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.72046505340853	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCTTGGGACTTCAGGA	0	True	NA	NA	False	ATTAAA	-36	NA	52445103	52433034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52436074_52437526_52437667_52437970_52438200_52438919_52438962_52439679_52439772_52439866_52440099_52440376_52440522_52440753_52440824_52440933_52441049_52441263_52441410_52441573_52441691_52441818_52441910_52442184_52442305_52442558_52442622_52442746_52442908_52444912
transcript_136944.known	chr3	-	687	6	FSM	ENSG00000114854.8	ENST00000232975.8	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	6.70522184569608	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTATCTGGCTCTGG	-1	True	NA	-9	True	AATAAA	-15	NA	52454041	52451099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52451307_52451390_52451528_52451743_52451859_52452105_52452253_52452482_52452514_52453991
transcript_136951.known	chr3	+	5139	21	FSM	ENSG00000010322.16	ENST00000345716.9	5139	21	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_13	33.9033921606673	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTCTAAACCAAGGG	-11	True	NA	36	True	AATAAA	-19	NA	52455603	52493068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52484512_52484638_52485777_52485828_52487195_52488606_52489335_52489679_52490074_52490232_52490704_52490834_52491351_52491514_52491871
transcript_136977.known	chr3	+	2589	14	FSM	ENSG00000010322.16	ENST00000420808.2	2589	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	92.1056121361899	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACCTCTCTTTCCTTT	2	True	NA	10	True	AATAAA	-20	NA	52455616	52481914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52480878
transcript_136980.known	chr3	+	3168	13	FSM	ENSG00000010322.16	ENST00000488380.5	3168	13	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_9	24.6813019645777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCACCTCTCTTTC	2	True	NA	6	True	AATAAA	-16	NA	52455616	52481910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183
transcript_136997.nic	chr3	-	3139	19	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-37	5562	combination_of_known_junctions	FALSE	canonical	3	53	junction_18	70.5393900991181	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGTTTCTTTTCATT	-17	True	NA	54	True	GATAAA	-23	NA	52685954	52603523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52682091_52682234_52685748
transcript_136998.nic	chr3	-	3005	18	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-45	5562	combination_of_known_junctions	FALSE	canonical	3	182	junction_17	37.6648854852357	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGTTTCTTTTCATT	-25	True	NA	54	True	GATAAA	-23	NA	52685962	52603523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
transcript_1370.known	chr1	+	2821	2	FSM	ENSG00000197530.13	ENST00000477990.1	2821	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAGAAAAAATGAGC	3	True	NA	NA	False	NA	NA	NA	1615515	1619210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1615634_1616507
transcript_137002.nic	chr3	-	1903	15	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-37	-18188	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	75.9717992791686	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATACTCTTCTTATAG	-17	True	NA	NA	False	AAGAAA	-3	NA	52685954	52627273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52682091_52682234_52685748
transcript_137004.nic	chr3	-	1769	14	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-45	-18188	combination_of_known_junctions	FALSE	canonical	3	182	junction_13	35.7502844777029	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATACTCTTCTTATAG	-25	True	NA	NA	False	AAGAAA	-3	NA	52685962	52627273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
transcript_137009.nic	chr3	-	1477	12	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-45	17109	combination_of_known_junctions	FALSE	canonical	3	182	junction_11	38.2633329001552	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTGATTATTACCAGCA	-25	True	NA	NA	False	AAGAAA	-4	NA	52685962	52634654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
transcript_137016.known	chr3	-	1877	14	FSM	ENSG00000168268.11	ENST00000422318.7	1877	14	0	0	0	0	multi-exon	FALSE	canonical	3	1886	junction_13	157.696660352686	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-22	True	NA	-23	True	AATAAA	-17	NA	52533857	52524386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
transcript_137017.nnic	chr3	-	1674	15	NNC	ENSG00000168268.11	novel	1877	14	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	566.583495296904	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	23	True	NA	-23	True	AATAAA	-17	NA	52533812	52524386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505_52533586_52533743
transcript_137022.nic	chr3	-	1837	14	NIC	ENSG00000168268.11	novel	1877	14	NA	NA	-212	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	586.980620225838	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	529	False	NA	-23	True	AATAAA	-17	NA	52534521	52524386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534209
transcript_137024.known	chr3	-	2047	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	586.722135175865	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-4	True	NA	-23	True	AATAAA	-17	NA	52535054	52524386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
transcript_137038.known	chr3	+	314	3	FSM	ENSG00000168273.8	ENST00000491607.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCAGTGCCTTT	3	True	NA	-20	True	AATAAA	-18	NA	52534012	52540526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52534149_52534802_52534878_52540423
transcript_137039.known	chr3	+	1769	2	FSM	ENSG00000168273.8	ENST00000477703.6	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCTGTGGGT	0	True	NA	12	True	AATAAA	-13	NA	52536604	52541890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52536907_52540423
transcript_137040.known	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	-3	True	NA	-21	True	AATAAA	-17	NA	52536601	52540525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52536774_52540423
transcript_137043.known	chr3	-	6053	16	FSM	ENSG00000114904.13	ENST00000233027.10	6053	16	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_9	31.0247213256354	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTACTCTTCTATGT	-9	True	NA	-1	True	AATAAA	-20	NA	52770940	52708443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52749691_52749830_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
transcript_137047.known	chr3	+	1933	15	FSM	ENSG00000163938.17	ENST00000418458.6	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	132.31872466873	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTTTTATTTACAGAT	11	True	NA	3	True	AATAAA	-24	NA	52686031	52694497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_137053.known	chr3	+	2041	15	FSM	ENSG00000163938.17	ENST00000394799.6	2041	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	338.111290698727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAGTTTTATTTA	-5	True	NA	-2	True	AATAAA	-19	NA	52686015	52694492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686203_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_137059.known	chr3	+	2118	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	127.693419828336	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	28	False	NA	-35	True	AAAAAG	-29	NA	52686048	52694459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_137085.nic	chr3	-	2354	11	NIC	ENSG00000016864.19	novel	1826	11	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_10	66.4887960486577	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-28	True	NA	-5	True	AATAAA	-17	NA	52706063	52694488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705446
transcript_137086.known	chr3	-	1826	11	FSM	ENSG00000016864.19	ENST00000478968.6	1826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.8814564656201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-15	True	NA	-5	True	AATAAA	-17	NA	52705791	52694488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705702
transcript_137091.known	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_9	44.0204778385674	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-15	True	NA	-2	True	AATAAA	-20	NA	52705791	52694485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
transcript_137092.known	chr3	-	1577	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	78.701969479804	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTTCAATAGGTAT	-5	True	NA	-19	True	AATAAA	-3	NA	52705781	52694502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
transcript_1371.known	chr1	+	1578	2	FSM	ENSG00000197530.13	ENST00000507082.1	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGTAACTCTCTGAGT	23	True	NA	NA	False	NA	NA	NA	1615913	1617898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1616101_1616507
transcript_137100.known	chr3	+	729	7	FSM	ENSG00000163938.17	ENST00000492349.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	447.019263815579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTTTATTAGTGGTAA	11	True	NA	NA	False	GATAAA	-16	NA	52686031	52690704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688207_52689073_52689207_52690591
transcript_137103.known	chr3	+	597	4	FSM	ENSG00000163938.17	ENST00000462550.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_2	41.6653333119993	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCAAGGCTGGTCTCA	11	True	NA	NA	False	NA	NA	NA	52686031	52687827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501
transcript_137104.known	chr3	+	3786	4	FSM	ENSG00000114902.14	ENST00000619898.5	3786	4	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	72.0940743442591	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAGTTTTAATTTG	-22	True	NA	NA	False	AAAACA	-20	NA	52706105	52711148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52706283_52706643_52706704_52706792_52706880_52707686
transcript_137106.known	chr3	+	826	3	FSM	ENSG00000114902.14	ENST00000448693.2	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAAGCAATCCGCCCAC	-19	True	NA	NA	False	AGTAAA	-30	NA	52706108	52707384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52706283_52706643_52706704_52706792
transcript_137121.known	chr3	-	4744	8	FSM	ENSG00000213533.13	ENST00000355083.11	4744	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	24.0916616958089	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	26	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
transcript_137129.known	chr3	-	4553	21	FSM	ENSG00000163935.14	ENST00000394752.8	4553	21	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_20	17.7242066112986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACTGATTGTGATTTT	-14	True	NA	-4	True	AATATA	-19	NA	53046073	52903571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53045815
transcript_13714.nnic	chr1	-	5812	29	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	69	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_28	57.2091022264029	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	5454	False	NA	-7	True	AGTAAA	-20	NA	153946649	153929500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153945134_153945284_153946296
transcript_137144.nic	chr3	-	2510	17	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	-183	-7431	combination_of_known_junctions	FALSE	canonical	3	14	junction_16	18.3047125079855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATGTTTTTCCAAT	NA	False	NA	NA	False	AATACA	-1	NA	53046933	52911002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53046459
transcript_137149.known	chr3	-	5081	13	FSM	ENSG00000163933.10	ENST00000296292.8	5081	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_3	47.6674679419832	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTTCTTTCATACC	4	True	NA	0	True	AATAAA	-25	NA	53130435	53088482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_137152.nnic	chr3	-	1845	12	NIC	ENSG00000163933.10	novel	5081	13	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_11	83.3256084573847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-28	True	NA	-27	True	TTTAAA	-13	NA	53130467	53091664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53130337
transcript_137153.known	chr3	-	1800	12	FSM	ENSG00000163933.10	ENST00000394738.7	1800	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	99.435098647184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-14	True	NA	-27	True	TTTAAA	-13	NA	53130453	53091664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53125908_53125995_53130337
transcript_137159.known	chr3	+	2833	19	FSM	ENSG00000163932.15	ENST00000330452.8	2833	19	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	31.412085823811	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGTCAGGACACGTT	-4	True	NA	10	True	AATAAA	-17	NA	53161208	53192717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53161429_53165103_53165216_53178403_53178538_53179576_53179777_53181206_53181268_53181443_53181607_53181700_53181733_53183120_53183207_53183451_53183582_53184873_53184975_53185603_53185701_53185926_53186028_53186166_53186341_53186603_53186696_53187339_53187403_53188719_53188859_53189057_53189247_53189872_53190002_53192107
transcript_137164.known	chr3	+	2810	18	FSM	ENSG00000163932.15	ENST00000394729.6	2810	18	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	21.2737959580247	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGTCAGGACACGTT	NA	False	NA	10	True	AATAAA	-17	NA	53161119	53192717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53161429_53178403_53178538_53179576_53179777_53181206_53181268_53181443_53181607_53181700_53181733_53183120_53183207_53183451_53183582_53184873_53184975_53185603_53185701_53185926_53186028_53186166_53186341_53186603_53186696_53187339_53187403_53188719_53188859_53189057_53189247_53189872_53190002_53192107
transcript_137190.known	chr3	-	2831	15	FSM	ENSG00000163931.17	ENST00000423525.6	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	866.172818807434	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCAGGCAATTGCCCCC	18	False	NA	-10	True	AATAAA	-13	NA	53256000	53224713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225610_53225750_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_13720.known	chr1	-	5728	28	FSM	ENSG00000198837.10	ENST00000361217.9	5728	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	47.6877129858591	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-18	True	NA	-7	True	AGTAAA	-20	NA	153946718	153929500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946300
transcript_137206.known	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	1167.75203546238	4049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-4	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_137218.known	chr3	-	1941	14	FSM	ENSG00000163931.17	ENST00000450814.6	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	910.750448091147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-4	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235065_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_13722.nnic	chr1	-	5660	28	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	42.8220550074576	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-22	True	NA	-7	True	AGTAAA	-20	NA	153946722	153929500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153931022_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946296
transcript_137223.known	chr3	-	2996	14	FSM	ENSG00000163931.17	ENST00000462138.6	2996	14	0	0	0	0	multi-exon	FALSE	canonical	3	2955	junction_11	271.584371799846	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCAATTGCCCCCCA	-4	True	NA	-8	True	AATAAA	-15	NA	53256022	53224711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_137264.nic	chr3	-	2059	11	NIC	ENSG00000272886.6	novel	5926	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	69.8186221577023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53347558	53287365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53338090_53338146_53342143_53342272_53344901_53344943_53347382
transcript_137266.known	chr3	-	5926	10	FSM	ENSG00000272886.6	ENST00000610213.6	5926	10	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_7	13.0507083200231	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTTAATTGTGTTTT	-12	True	NA	15	True	AATAAA	-27	NA	53347543	53283428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_137271.known	chr3	-	1853	9	FSM	ENSG00000272886.6	ENST00000294241.10	1853	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	55.17189048782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	53347525	53287369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_137280.nnic	chr3	-	3479	9	NNC	ENSG00000016391.11	novel	7694	9	NA	NA	-30	-4506	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	21.2190951739229	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGATTTTTTTGGACCT	8	False	NA	NA	False	NA	NA	NA	53846449	53816840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_53818196_53818937_53819041_53819531_53819675_53820473_53820609_53821646_53821777_53822490_53822643_53823305_53824068_53840928_53841000_53845821
transcript_137281.known	chr3	-	7694	9	FSM	ENSG00000016391.11	ENST00000315251.11	7694	9	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_3	12.4342018240014	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTACTTCTGGATAG	-9	True	NA	NA	False	AATAAA	-16	NA	53846419	53812334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53818196_53818937_53819041_53819531_53819675_53820473_53820609_53821646_53821777_53822490_53822643_53823305_53824068_53840928_53841000_53846082
transcript_137285.nnic	chr3	-	3248	8	NIC	ENSG00000016391.11	novel	7694	9	NA	NA	-203	-4506	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	20.6456992606011	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGATTTTTTTGGACCT	NA	False	NA	NA	False	NA	NA	NA	53846622	53816840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_53818196_53818937_53819041_53820473_53820609_53821646_53821777_53822490_53822643_53823305_53824068_53840928_53841000_53846082
transcript_137292.known	chr3	+	2016	11	FSM	ENSG00000056736.10	ENST00000288167.8	2016	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	7.83836717690617	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACTGGACCAAATGAT	-1	True	NA	NA	False	AATAAA	-14	NA	53846567	53865794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_137297.known	chr3	+	2822	10	FSM	ENSG00000056736.10	ENST00000475124.1	2822	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.18709405724277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	15	False	NA	-3	True	AATAAA	-9	NA	53846583	53865588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53858819_53860129_53860229_53864745
transcript_137298.known	chr3	+	1048	10	FSM	ENSG00000056736.10	ENST00000494338.1	1048	10	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_5	11.3137084989848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGTGGCAGAAAAA	16	False	NA	NA	False	NA	NA	NA	53846584	53864891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_1373.known	chr1	-	2038	1	FSM	ENSG00000272106.1	ENST00000607222.1	2038	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTGTTTTGTTTTG	-10	True	NA	-1	True	AATAAA	-20	NA	1615795	1613757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1613800_1615800
transcript_137309.known	chr3	-	2583	1	FSM	ENSG00000271976.1	ENST00000607783.1	2583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTAGGTTCTCTGGGAC	NA	False	NA	-6	True	AATAAA	-16	NA	53861576	53858993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53859000_53861600
transcript_137312.known	chr3	-	3579	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	15.5902391115581	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCCTCAGCCATTAC	-1	True	NA	-18	True	ATTAAA	-1	NA	53882152	53867065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_137320.nic	chr3	-	1695	11	ISM	ENSG00000113812.14	ENST00000335754.8	3579	13	-3	4092	-3	0	5prime_fragment	FALSE	canonical	3	102	junction_2	16.8463645929916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTGTGCAGTATAACA	-4	True	NA	NA	False	AATAAA	-17	NA	53882155	53871157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_137322.known	chr3	-	814	6	NNC	ENSG00000113811.12	novel	1497	5	NA	NA	-77	101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	533.348441452677	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTGTCACCTTTTC	NA	False	NA	-28	True	AATAAA	-17	NA	53891962	53885199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_53885562_53885825_53885831_53885833_53885913_53886850_53886935_53888392_53888484_53891769
transcript_137323.known	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	556.006913176446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	6	True	NA	-35	True	ATTAAA	-13	NA	53891865	53885300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
transcript_137333.known	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	2161	junction_1	3129.71067175368	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
transcript_137334.nnic	chr3	-	1226	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_3	3862.21295229676	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54639604
transcript_137336.nnic	chr3	-	2833	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6290	junction_1	1243.11982080928	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54639857	54632123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690
transcript_137337.nnic	chr3	-	966	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_3	3713.10893995854	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54639904	54632123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54639604
transcript_137340.nnic	chr3	-	2061	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-86	-2	intron_retention	FALSE	canonical	3	371	junction_2	4470	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54639943	54632123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54633741_54634460_54634566_54639604
transcript_137341.nnic	chr3	-	2648	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_1	3993.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCTTTTCTCTTCATA	NA	False	NA	-27	True	ATTAAA	-19	NA	54639857	54632126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54634460_54634566_54637690
transcript_137342.nnic	chr3	-	933	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-199	-5	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_1	113.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCTTTTCTCTTCATA	NA	False	NA	-27	True	ATTAAA	-19	NA	54640056	54632126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54634460_54634566_54639604
transcript_137349.known	chr3	-	5600	24	FSM	ENSG00000163946.14	ENST00000493960.6	5600	24	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	14.3926835014979	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGCAAAGGCTTTACT	240	False	NA	NA	False	NA	NA	NA	56683017	56622737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
transcript_137351.known	chr3	+	3042	18	FSM	ENSG00000180376.17	ENST00000341455.10	3042	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	33.2709335201319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTAGTAGTAAAAAAAAAA	27	True	NA	7	True	AATAAA	-22	NA	56557218	56621808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_137352.known	chr3	+	3027	18	FSM	ENSG00000180376.17	ENST00000326595.11	3027	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	34.1222106481331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTACTTGTTCTATACA	-4	True	NA	-39	True	ATTAAA	-24	NA	56557187	56621762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_56557235_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_137373.known	chr3	+	2188	7	FSM	ENSG00000180376.17	ENST00000442522.6	2188	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	43.4757275832031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCGGAGATTGCAGT	36	False	NA	NA	False	NA	NA	NA	56557227	56570671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312
transcript_137375.known	chr3	+	1983	13	FSM	ENSG00000180376.17	ENST00000422222.5	1983	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	42.1353638751214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGTGTAATCAGTTCA	-31	True	NA	NA	False	GATAAA	-36	NA	56557160	56617301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111
transcript_137378.nic	chr3	-	2079	12	ISM	ENSG00000163947.12	ENST00000338458.8	3639	13	0	4175	0	0	5prime_fragment	FALSE	canonical	2	12	junction_11	9.34552529156102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAATAGGAAGGGAT	-4	True	NA	0	True	GATAAA	-43	NA	57079308	56731592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56882291_56882355_56958822_56958890_57035087_57035177_57079225
transcript_137379.known	chr3	-	3582	10	FSM	ENSG00000163947.12	ENST00000296315.8	3582	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	10.7059461959519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATGTGTACAGTGTT	-1	True	NA	-3	True	AATAAA	-17	NA	56801949	56727419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_137380.known	chr3	-	2024	9	FSM	ENSG00000163947.12	ENST00000495373.5	2024	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	9.81628111863143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAATAGGAAGGGAT	-1	True	NA	0	True	GATAAA	-43	NA	56801949	56731592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_137381.known	chr3	-	8698	13	FSM	ENSG00000144730.19	ENST00000296318.12	8698	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	7.92674796706274	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGTGGCTCATTTTT	-4	True	NA	-7	True	AATAAA	-15	NA	57165353	57089981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57096506_57097595_57098539_57101178_57101364_57102478_57102590_57103090_57103146_57104341_57104408_57105856_57106009_57106109_57106155_57109536_57109658_57110192_57110312_57114691_57114818_57120255_57120314_57165160
transcript_137395.known	chr3	-	757	3	FSM	ENSG00000163666.10	ENST00000473921.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCATGACTAAGTGAT	41	False	NA	56	True	AATAAA	-19	NA	57199938	57197915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57198296_57198752_57198953_57199761
transcript_137397.known	chr3	+	6069	22	FSM	ENSG00000157500.12	ENST00000288266.8	6069	22	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	25.3206197958911	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATACTCTGAACTTT	-27	True	NA	31	True	AATAAA	-35	NA	57227728	57273471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540
transcript_1374.known	chr1	-	2534	21	FSM	ENSG00000248333.9	ENST00000340677.9	2534	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_19	51.8785842135269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	-25	True	NA	NA	False	NA	NA	NA	1659012	1635737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_13740.nnic	chr1	-	5275	26	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_22	47.0310535710184	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-22	True	NA	-7	True	AGTAAA	-20	NA	153946722	153929500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941395_153942555_153942626_153942877_153943131_153944057_153944398_153946296
transcript_137401.nic	chr3	+	2097	21	ISM	ENSG00000157500.12	ENST00000288266.8	6069	22	-18	5043	-15	407	5prime_fragment	FALSE	canonical	3	214	junction_8	25.899613896736	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAGAGAGTAAAAGAGAAG	NA	False	NA	-53	True	AAAAAG	-4	NA	57227710	57268428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397
transcript_137404.known	chr3	+	2217	20	FSM	ENSG00000157500.12	ENST00000482800.5	2217	20	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	26.2658473467373	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGAGGTTGCAATGAGCC	33	True	NA	NA	False	NA	NA	NA	57227788	57268021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741
transcript_137408.known	chr3	+	516	8	FSM	ENSG00000157500.12	ENST00000444459.1	516	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	121.408233590945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	18	True	NA	11	True	AATAGA	-15	NA	57227873	57242892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57227938_57230713_57230768_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_137410.nic	chr3	+	625	7	ISM	ENSG00000157500.12	ENST00000482800.5	2217	20	-78	25129	-15	0	5prime_fragment	FALSE	canonical	3	246	junction_3	21.1476292340825	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	NA	False	NA	11	True	AATAGA	-15	NA	57227710	57242892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_137412.nic	chr3	+	362	3	ISM	ENSG00000157500.12	ENST00000468342.1	419	4	-128	678	-15	-678	5prime_fragment	FALSE	canonical	3	262	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAGAATATGAAAA	NA	False	NA	NA	False	AATGAA	-31	NA	57227710	57237527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57227938_57235565_57235665_57237491
transcript_137413.known	chr3	+	8780	3	FSM	ENSG00000174840.9	ENST00000311180.9	8780	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	2	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGCCTTTTCAGGACC	-17	True	NA	NA	False	AATAAA	-19	NA	57556273	57566848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57557688_57559309_57559389_57559561
transcript_137421.known	chr3	-	1596	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	0	0	0	multi-exon	TRUE	canonical	3	1658	junction_2	108.899954086308	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	0	True	NA	NA	False	AATAAA	-17	NA	57597344	57571362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
transcript_137423.known	chr3	-	1601	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	737.575216503375	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTGGAATTATTCCT	10	True	NA	NA	False	AATACA	-12	NA	57597366	57571404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
transcript_137426.known	chr3	-	1467	5	FSM	ENSG00000168374.11	ENST00000496292.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	809.118501827761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCCTAATAAAATGATAA	134	False	NA	NA	False	AATACA	-25	NA	57597325	57571391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57597073
transcript_137431.known	chr3	+	6381	25	FSM	ENSG00000163681.16	ENST00000671191.1	6381	25	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	39.0992105276934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCAGAATTTCTGTGTA	18	True	NA	3	True	ATTAAA	-18	NA	57756308	57930003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57865241_57865293_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
transcript_137433.nic	chr3	+	5483	23	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	30.5560384801974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTACTCTCCCTACGCA	NA	False	NA	-5	True	AATAAA	-3	NA	57756241	57929152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
transcript_137444.nic	chr3	+	2263	11	ISM	ENSG00000163681.16	ENST00000295951.7	5433	22	12	64529	12	0	5prime_fragment	FALSE	canonical	3	148	junction_2	12.1675798744039	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAGCTCCAGGCAAAAA	NA	False	NA	NA	False	CATAAA	-24	NA	57756241	57864639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547
transcript_137448.known	chr3	+	9441	46	FSM	ENSG00000136068.16	ENST00000295956.9	9441	46	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_15	119.421643301744	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTGTTCTTGGA	0	True	NA	21	True	AATAAA	-17	NA	58008421	58172251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079_58105217_58106679_58106874_58108457_58108572_58109178_58109323_58109575_58109700_58110009_58110171_58111790_58111882_58112148_58112319_58118871_58118990_58121240_58121504_58123092_58123691_58124331_58124506_58125580_58125744_58126601_58126763_58130740_58130909_58132807_58132932_58134615_58134773_58135978_58136169_58138281_58138530_58141857_58141930_58142649_58142753_58143472_58143614_58145920_58146050_58146819_58146994_58148205_58148365_58148648_58148853_58149849_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58168659_58169589_58169794_58170574
transcript_137451.nic	chr3	+	3359	12	ISM	ENSG00000136068.16	ENST00000682868.1	9635	28	-45	32910	-21	0	5prime_fragment	TRUE	canonical	3	252	junction_7	24.3395403231141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCCGATGAACAAAAACAAAA	285	False	NA	NA	False	CATAAA	-13	NA	58008376	58108103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079_58105217_58106679
transcript_137453.known	chr3	+	2527	11	FSM	ENSG00000136068.16	ENST00000682987.1	2527	11	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_7	22.3179300115401	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAATAGCAATAAGCAAA	0	True	NA	NA	False	NA	NA	NA	58008421	58105853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079
transcript_137456.nnic	chr3	+	1276	5	NNC	ENSG00000136068.16	novel	2527	11	NA	NA	-21	-17466	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	136.604126950836	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTGGACTTCTGCTC	285	False	NA	NA	False	AATAAA	-17	NA	58008376	58088387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58088086
transcript_137457.known	chr3	+	2198	10	FSM	ENSG00000163686.15	ENST00000478253.6	2198	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	13.7634333930685	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	-18	True	NA	12	True	AATAAA	-23	NA	58237791	58294734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58237917_58249877_58249943_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_137460.known	chr3	+	2393	9	FSM	ENSG00000163686.15	ENST00000295962.8	2393	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	9.82900681656087	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	3	True	NA	12	True	AATAAA	-23	NA	58237531	58294734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58237917_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_137462.nnic	chr3	+	2213	8	NIC	ENSG00000163686.15	novel	2393	9	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.2035285873217	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	-6	True	NA	12	True	AATAAA	-23	NA	58237567	58294734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_58237917_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_137468.known	chr3	+	888	6	FSM	ENSG00000255154.9	ENST00000474660.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	122.414704999032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGGAAATACAATTGTA	-3	True	NA	NA	False	AATGAA	-20	NA	58306271	58317842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306418_58310506_58310592_58315721_58315820_58316514_58316592_58316914_58316994_58317439
transcript_137469.known	chr3	+	805	6	FSM	ENSG00000163684.12	ENST00000466547.1	805	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	105.397153661757	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCAGAATTAACAGGGGA	35	True	NA	NA	False	NA	NA	NA	58306309	58317778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306418_58310289_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_137471.known	chr3	+	7985	6	FSM	ENSG00000163684.12	ENST00000445193.7	7985	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	85.8449765565813	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGGAAACACTGAGTT	-13	True	NA	NA	False	AATAAA	-26	NA	58306261	58324695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306652_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_137473.known	chr3	+	1378	5	FSM	ENSG00000255154.9	ENST00000481972.5	1378	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	77.7978148793396	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGAAACCCCATCTCT	39	False	NA	NA	False	NA	NA	NA	58306313	58318472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306418_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_137474.known	chr3	+	3127	5	FSM	ENSG00000255154.9	ENST00000461393.7	3127	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	101.512006679013	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	-14	True	NA	8	True	NA	NA	NA	58306519	58320193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306652_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_137475.known	chr3	+	1531	6	FSM	ENSG00000255154.9	ENST00000477305.5	1531	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	122.414704999032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATCTCTACCAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	58306271	58318484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306418_58310506_58310592_58315721_58315804_58316497_58316592_58316914_58316994_58317439
transcript_137479.known	chr3	+	3001	18	FSM	ENSG00000168297.16	ENST00000356151.7	3001	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_16	14.5095124507026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTCTTATTCTTTTG	-26	True	NA	119	True	AATAGA	-32	NA	58332891	58426127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
transcript_137481.nic	chr3	+	2910	18	NIC	ENSG00000168297.16	novel	3001	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_16	19.9676208485874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGTCTGTAGCTTGAC	-42	True	NA	15	True	ATTAAA	-16	NA	58332875	58426023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412903_58412964_58424751
transcript_137482.known	chr3	+	1974	17	FSM	ENSG00000168297.16	ENST00000302779.9	1974	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	20.4640500329236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCTTAAGATCTTGCT	-38	True	NA	-2	True	AATAAA	-14	NA	58332879	58425151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58424751
transcript_137486.known	chr3	+	2825	17	FSM	ENSG00000168297.16	ENST00000463280.5	2825	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	36.8200331850747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGTCTGTAGCTTGAC	-20	True	NA	15	True	ATTAAA	-16	NA	58332897	58426023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58333091_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58420535_58420569_58424751
transcript_137487.known	chr3	-	1507	10	FSM	ENSG00000168291.13	ENST00000302746.11	1507	10	0	0	0	0	multi-exon	FALSE	canonical	3	2576	junction_3	127.357763799464	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	1	True	NA	-2	True	AATAAA	-17	NA	58433832	58427629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_137488.known	chr3	-	1616	10	FSM	ENSG00000168291.13	ENST00000469364.5	1616	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	871.120351424915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAATTTCTAACATG	13	True	NA	7	True	ATTAAA	-42	NA	58433820	58427650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429942_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_137489.known	chr3	-	1535	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	2576	junction_3	120.525930819886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATAATATACATTTACT	-6	True	NA	-34	True	ATTAAA	-1	NA	58433839	58427691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
transcript_137490.known	chr3	-	1478	9	FSM	ENSG00000168291.13	ENST00000383714.8	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	903.506286295231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	NA	False	NA	-2	True	AATAAA	-17	NA	58433857	58427629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433767
transcript_137491.known	chr3	+	1759	4	FSM	ENSG00000168301.13	ENST00000490264.1	1759	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	70.6179077068196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACTAATAAAAAATGAA	5	True	NA	-15	True	NA	NA	NA	58492118	58502327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58492170_58494152_58494409_58498712_58498783_58500945
transcript_137492.known	chr3	+	1555	3	FSM	ENSG00000168301.13	ENST00000404589.8	1555	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	19	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTGTATTTATTGAT	-18	True	NA	14	True	AATAAA	-17	NA	58492095	58502356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58492170_58498712_58498783_58500945
transcript_137493.known	chr3	-	2297	15	FSM	ENSG00000168306.13	ENST00000302819.10	2297	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	10.7069022178238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	4	True	NA	-2	True	ATTAAA	-14	NA	58537190	58505135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465_58526657_58528793_58528957_58530465_58530639_58531250_58531367_58531692_58531813_58533444_58533553_58533993_58534146_58534359_58534523_58534946_58535198_58537118
transcript_137497.known	chr3	-	1072	6	FSM	ENSG00000168306.13	ENST00000467738.1	1072	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	2.28035085019828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	49	False	NA	-2	True	ATTAAA	-14	NA	58526749	58505135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465
transcript_1375.known	chr1	-	2992	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_16	41.8596785341289	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGTGTCGTCCTTTGA	-17	True	NA	NA	False	ATTAAA	-18	NA	1659004	1635224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_137500.known	chr3	-	1432	4	FSM	ENSG00000168309.18	ENST00000447756.2	1432	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGCTTCTAACTCAAT	NA	False	NA	NA	False	CATAAA	-20	NA	58587113	58565851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58566696_58567207_58567365_58569690_58569866_58586857
transcript_137506.known	chr3	-	3116	10	FSM	ENSG00000189283.10	ENST00000492590.6	3116	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.80740170061865	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGAGTGTGTGGT	-31	True	NA	NA	False	ATTAAA	-21	NA	61251452	59747276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_59749580_59752220_59752322_59922345_59922415_60011370_60011401_60014006_60014153_60536859_60536980_60821918_60822012_61042046_61042100_61200616_61200666_61251300
transcript_137508.known	chr3	+	9357	30	FSM	ENSG00000144724.20	ENST00000474889.6	9357	30	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_14	59.1724941724396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTGTTGAGCATTT	-1	True	NA	7	True	AATAAA	-18	NA	61561570	62297609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_61562373_61748877_61748983_61989624_61989805_62003348_62003498_62078162_62078259_62132601_62132669_62157066_62157225_62167970_62168164_62191468_62191654_62195061_62195171_62201504_62201555_62203172_62203951_62218850_62218984_62231224_62231312_62243806_62243899_62255123_62255216_62262797_62262895_62267409_62267493_62267684_62267820_62269034_62269170_62271382_62271556_62272945_62273082_62273697_62273845_62275872_62275967_62276971_62277049_62277550_62277680_62281562_62281710_62282726_62282870_62292420_62292557_62293160
transcript_137513.known	chr3	+	4650	29	FSM	ENSG00000144724.20	ENST00000295874.14	4650	29	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	47.9752274510459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTAAACTTCTGAAGA	143	False	NA	NA	False	NA	NA	NA	61561910	62293329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_61562373_61748877_61748983_61989624_61989805_62003348_62003498_62078162_62078259_62132601_62132669_62157066_62157225_62167970_62168164_62191468_62191654_62195061_62195171_62201504_62201555_62203172_62203951_62218850_62218984_62243806_62243899_62255123_62255216_62262797_62262895_62267409_62267493_62267684_62267820_62269034_62269170_62271382_62271556_62272945_62273082_62273697_62273845_62275872_62275967_62276971_62277049_62277550_62277680_62281562_62281710_62282726_62282870_62292420_62292557_62293160
transcript_137515.known	chr3	-	652	1	FSM	ENSG00000226360.5	ENST00000472730.1	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACATTTGAATAAATTCT	27	False	NA	NA	False	NA	NA	NA	61743106	61742454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_61742500_61743100
transcript_137516.known	chr3	+	3369	6	FSM	ENSG00000114405.11	ENST00000462069.6	3369	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	38.2287849663052	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	14	True	NA	NA	False	ATTAAA	-16	NA	62319021	62336213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_137517.known	chr3	+	582	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	102.541455031611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTACACTTGGGGAGG	7	True	NA	NA	False	AATAAA	-40	NA	62319014	62324133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
transcript_137518.known	chr3	+	768	5	FSM	ENSG00000114405.11	ENST00000542214.2	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_3	9.36416040016402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	10	False	NA	12	True	ATTAAA	-24	NA	62319720	62333646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_137541.nic	chr3	+	2117	2	ISM	ENSG00000163630.11	ENST00000450542.6	1004	5	-30	335007	-20	-276120	5prime_fragment	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTTTACCTCAAC	-21	True	NA	NA	False	NA	NA	NA	63278287	63280529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_63278552_63278676
transcript_137546.known	chr3	-	892	8	FSM	ENSG00000163634.12	ENST00000295899.10	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_7	99.6155876664011	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGTGCTCATTAATA	30	True	NA	-16	True	AATAAA	-17	NA	63863805	63833869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863771
transcript_137548.known	chr3	-	836	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	238.782792977681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTGTGCTCATTAAT	611	False	63863900	-17	True	AATAAA	-16	NA	63863868	63833870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
transcript_137551.nic	chr3	-	413	3	ISM	ENSG00000163634.12	ENST00000295899.10	892	8	-159	4528	-96	-297	5prime_fragment	FALSE	canonical	3	443	junction_2	117.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGAAAAAATTTACAAGG	515	False	NA	-16	True	NA	NA	NA	63863964	63838397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_63838500_63839655_63839774_63863771
transcript_137552.known	chr3	-	1495	9	FSM	ENSG00000163636.11	ENST00000492933.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	519.221532681379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-5	True	NA	-20	True	AATAAA	-18	NA	64023472	64010554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64022642_64022802_64023274
transcript_137557.known	chr3	-	1362	8	FSM	ENSG00000163636.11	ENST00000295901.9	1362	8	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_7	132.54048284142	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-27	True	NA	-16	True	AATAAA	-22	NA	64023494	64010550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023274
transcript_137558.known	chr3	-	1176	8	FSM	ENSG00000163636.11	ENST00000482510.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	433.249327283767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATAAATACTGCAT	9	True	NA	-49	True	NA	NA	NA	64023458	64010583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023391
transcript_137559.known	chr3	-	2052	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_1	51.2466801092736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	30	True	NA	-20	True	AATAAA	-18	NA	64023437	64010554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
transcript_137573.known	chr3	-	6225	22	FSM	ENSG00000151276.24	ENST00000621418.4	6225	22	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_6	37.8240346389948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCTGAGGAAGAGTAC	70	False	NA	NA	False	ATTAAA	-32	NA	65622090	65354230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375946_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65448021_65448058_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65621971
transcript_137588.nic	chr3	-	5490	21	NIC	ENSG00000151276.24	novel	6225	22	NA	NA	-161	-648	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	52.0408253201273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCAATCATTGCGTGTA	1	True	NA	NA	False	AAAAAG	-24	NA	65598047	65354878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65448021_65448058_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
transcript_137599.nic	chr3	-	1706	5	ISM	ENSG00000151276.24	ENST00000460329.6	3694	22	-346	91717	-346	0	5prime_fragment	FALSE	canonical	0	0	junction_4	73.0530629063559	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	NA	False	NA	NA	False	AATGAA	-13	NA	65598232	65452581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
transcript_137600.known	chr3	-	2247	6	FSM	ENSG00000151276.24	ENST00000464060.5	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	51.9869214322218	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	16	True	NA	NA	False	AATGAA	-13	NA	66038834	65452581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_65453341_65470282_65470488_65478591_65478799_65493511_65493632_65621971_65622089_66037995
transcript_137604.known	chr3	+	2035	10	FSM	ENSG00000144741.19	ENST00000354883.11	2035	10	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	38.0292285252044	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTCCCTCTTTCACA	-1	True	NA	NA	False	AATAAA	-18	NA	66221000	66378923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_137607.nnic	chr3	+	1146	9	NIC	ENSG00000144741.19	novel	2035	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	89.3846148674368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	-1	True	NA	27	True	AATAAA	-18	NA	66221000	66378079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_137610.known	chr3	+	1023	9	FSM	ENSG00000144741.19	ENST00000336733.10	1023	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	72.1577048900532	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	10	True	NA	27	True	AATAAA	-18	NA	66221011	66378079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_137621.known	chr3	-	5363	19	FSM	ENSG00000144749.14	ENST00000273261.8	5363	19	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_8	59.5231047577325	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGTTGGTGGTCCTTCT	-21	True	NA	NA	False	AATAAA	-20	NA	66501022	66378796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_66380490_66380576_66380862_66381478_66381632_66382272_66382399_66382981_66383402_66383990_66384273_66385980_66386302_66394039_66394204_66398111_66398184_66398969_66399042_66405197_66405279_66407347_66407492_66410128_66410273_66412870_66413015_66414919_66415064_66417128_66417267_66451558_66451634_66462437_66462510_66500189
transcript_137632.nnic	chr3	-	5218	18	NIC	ENSG00000144749.14	novel	5363	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_12	125.462852413135	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATAGTTGGTGGTCCTTC	-21	True	NA	NA	False	AATAAA	-19	NA	66501022	66378797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_66380490_66380576_66380862_66381478_66381632_66382272_66382399_66382981_66383402_66383990_66384273_66385980_66386302_66394039_66394204_66398111_66398184_66398969_66399042_66405197_66405279_66407347_66407492_66412870_66413015_66414919_66415064_66417128_66417267_66451558_66451634_66462437_66462510_66500189
transcript_137642.nic	chr3	-	3812	9	ISM	ENSG00000144749.14	ENST00000273261.8	5363	19	-99	24463	-99	6494	5prime_fragment	FALSE	canonical	3	408	junction_2	22.9969427315893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCATTTTCTTCTTGGA	-2	True	NA	NA	False	AAGAAA	-5	NA	66501121	66403259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_66405279_66407347_66407492_66410128_66410273_66412870_66413015_66414919_66415064_66417128_66417267_66451558_66451634_66462437_66462510_66500189
transcript_137644.known	chr3	+	4680	4	FSM	ENSG00000163376.11	ENST00000417314.2	4680	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	9.17726659862414	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGTGTTGCAAAGTGA	-10	True	NA	18	True	AATAAA	-19	NA	66998306	67011210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_66998372_66998980_66999192_67003194_67004310_67007921
transcript_137647.known	chr3	-	2350	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_4	39.81155611126	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGTATCTCTCAT	-10	True	NA	-1	True	AATAAA	-22	NA	67654612	67374718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
transcript_137650.nic	chr3	-	1076	2	ISM	ENSG00000172340.15	ENST00000492795.1	1512	10	-50	200070	-45	-200070	5prime_fragment	FALSE	canonical	3	609	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAACAACAAACAACTTC	NA	False	NA	NA	False	NA	NA	NA	67654657	67608675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_67609597_67654502
transcript_137651.known	chr3	+	2715	6	FSM	ENSG00000241316.8	ENST00000659899.1	2715	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.24499443206436	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTAAGTGACAATATCC	NA	False	NA	NA	False	TTTAAA	-7	NA	67654711	67752215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770_67746958_67749852_67749971_67750413
transcript_137654.known	chr3	-	2229	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.3231850475024	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-3	True	NA	-3	True	AGTAAA	-23	NA	68932547	68731765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_137659.known	chr3	-	4443	18	FSM	ENSG00000163378.14	ENST00000383701.8	4443	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_16	13.0921672877586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAACCATTTTTAAGG	-13	True	NA	-33	True	AATAAA	-22	NA	69013684	68975224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_68977765_68978332_68978436_68979667_68979788_68982810_68982873_68987444_68987514_68988294_68988382_68988505_68988578_68988924_68989018_68998010_68998115_69001607_69001715_69004377_69004483_69005139_69005235_69007712_69007822_69008427_69008529_69009636_69009861_69011935_69011992_69012514_69012800_69013573
transcript_137663.nic	chr3	-	2142	2	NIC	ENSG00000163378.14	novel	924	6	NA	NA	-418	-3425	intron_retention	FALSE	canonical	3	75	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCACTAAAGTGACCTG	NA	False	NA	NA	False	AAAAAG	-7	NA	69014102	69011186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_69012800_69013573
transcript_137664.known	chr3	-	2111	18	FSM	ENSG00000144744.17	ENST00000361055.9	2111	18	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_17	77.6893824046008	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	5	True	NA	-26	True	AATAAA	-16	NA	69080365	69054729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
transcript_137668.known	chr3	-	2112	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_16	191.921034787097	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	NA	False	NA	-26	True	AATAAA	-16	NA	69080408	69054729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
transcript_137670.nic	chr3	-	2221	17	NIC	ENSG00000144744.17	novel	2111	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	639	junction_16	80.0561326507845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-20	False	NA	-26	True	AATAAA	-16	NA	69080390	69054729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
transcript_137673.known	chr3	-	2004	16	FSM	ENSG00000144744.17	ENST00000415609.6	2004	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	277.940441261953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-11	True	NA	-26	True	AATAAA	-16	NA	69080381	69054729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69077797_69077919_69080333
transcript_137680.known	chr3	-	622	4	FSM	ENSG00000144744.17	ENST00000466763.5	622	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	110.276420366681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTATTATTTCTTTT	5	True	NA	NA	False	AGTAAA	-40	NA	69080365	69075083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69075511_69077797_69077919_69080111_69080154_69080333
transcript_137681.known	chr3	-	431	2	FSM	ENSG00000144744.17	ENST00000464605.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTGTGGCCTTTT	16	True	NA	NA	False	NA	NA	NA	69080354	69079743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69080154_69080333
transcript_137682.known	chr3	+	2134	3	FSM	ENSG00000144746.7	ENST00000273258.4	2134	3	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_2	19	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTCTTAAATACCTGA	-3	True	NA	30	True	AATAAA	-41	NA	69084936	69106092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_69085224_69101838_69102057_69104463
transcript_137691.known	chr3	+	4799	10	FSM	ENSG00000187098.18	ENST00000352241.9	4799	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	3.46410161513775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGTGGCCTATTGTG	2	True	NA	3	True	ATTAAA	-16	NA	69739463	69968332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_69739702_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951811_69951887_69956454_69956531_69959272_69959421_69964846
transcript_137692.known	chr3	+	4767	10	FSM	ENSG00000187098.18	ENST00000642352.1	4767	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.87174399629335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCCTATTGTGTTAA	20	True	NA	7	True	ATTAAA	-20	NA	69739481	69968336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_69739702_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951829_69951887_69956454_69956531_69959272_69959421_69964846
transcript_137700.nic	chr3	-	2766	21	NIC	ENSG00000114861.24	novel	5813	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	5.2770730523653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTCAAAAGTTAGCAGTG	-2	True	NA	NA	False	AAAAAG	-15	NA	71583752	70959190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_70959392_70965889_70966057_70970735_70970806_70972010_70972181_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583570
transcript_137701.known	chr3	-	2971	21	FSM	ENSG00000114861.24	ENST00000649596.1	2971	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	5.17566420858232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTACTCCTTTTTTTTT	-1	True	NA	NA	False	NA	NA	NA	71583599	70958778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_70959392_70965889_70966057_70970735_70970806_70972554_70972677_70976940_70977043_70977642_70977720_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052624_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583570
transcript_137722.known	chr3	-	1948	15	FSM	ENSG00000114861.24	ENST00000650387.1	1948	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.74287865743829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	468	False	NA	NA	False	AATGAA	-7	NA	71064983	70959210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_70959392_70965889_70966057_70970735_70970806_70972554_70972677_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71064823
transcript_137729.known	chr3	-	2227	2	FSM	ENSG00000114861.24	ENST00000650231.1	2227	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGTGAAGCTCAAAAAAA	197	False	NA	NA	False	TTTAAA	-3	NA	71583762	71579662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71581698_71583570
transcript_137730.known	chr3	-	9978	7	FSM	ENSG00000163412.13	ENST00000425534.8	9978	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	13.8413631313297	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTCTGTCTCACT	-2	True	NA	NA	False	ATTAAA	-16	NA	71725402	71675413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71725191
transcript_137732.known	chr3	-	1555	4	FSM	ENSG00000163421.9	ENST00000295619.4	1555	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTGTCAGTTTTTAT	-1	True	NA	-1	True	NA	NA	NA	71785148	71771654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71772829_71774444_71774508_71781466_71781593_71784956
transcript_137733.known	chr3	-	1947	7	FSM	ENSG00000241163.9	ENST00000671527.1	1947	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	0.897527467855751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCCTTGAAATCGTC	1122	False	NA	NA	False	AATAAA	-24	NA	72100942	72035754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72036521_72055860_72055963_72059686_72060110_72060509_72060612_72060802_72061095_72099903_72100011_72100787
transcript_137734.known	chr3	-	2057	3	FSM	ENSG00000241163.9	ENST00000668763.1	2057	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTGCAATTTTGCC	1107	False	NA	NA	False	ATTAAA	-25	NA	72100957	72097231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72099012_72099903_72100011_72100787
transcript_137739.nnic	chr3	-	1129	5	NNC	ENSG00000163602.12	novel	7215	4	NA	NA	-504	-1152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.20060973342836	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTGCACAATTTTCC	546	False	NA	-9	True	TATAAA	-11	NA	72447125	72378101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495_72446622_72446934
transcript_137741.known	chr3	-	7217	4	FSM	ENSG00000163602.12	ENST00000477973.5	7215	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	14	junction_2	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTACTGTCCTGTTATTA	1048	False	NA	0	True	ATTAAA	-22	NA	72446623	72371824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495
transcript_137744.known	chr3	-	2846	11	FSM	ENSG00000144736.14	ENST00000325599.13	2846	11	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_10	19.6888293202008	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGTGGACGTATGC	-9	True	NA	-12	True	AATAAA	-25	NA	72848445	72749276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_137752.known	chr3	+	4957	9	FSM	ENSG00000163605.15	ENST00000356692.10	4957	9	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	65.4072578159335	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTGTGTAATTATT	-22	True	NA	25	True	AATAAA	-16	NA	72996810	73069198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
transcript_137756.nic	chr3	+	1501	8	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-38	3749	-30	159	intron_retention	FALSE	canonical	3	797	junction_7	67.9201211508258	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGATGATGCCTTAAC	NA	False	NA	87	True	AAGAAA	-14	NA	72996772	73065449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851
transcript_137760.nic	chr3	+	885	7	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-38	5070	-30	-838	5prime_fragment	FALSE	canonical	3	902	junction_2	33.5095342982992	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAGAAAAATCACAGGT	NA	False	NA	10	True	NA	NA	NA	72996772	73064128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002
transcript_137761.known	chr3	+	877	7	FSM	ENSG00000163605.15	ENST00000488810.5	877	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	348.75369372795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGGTGAAGTCAGAGA	6	True	NA	NA	False	AAAAAG	-14	NA	72996838	73064966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73064002_73064147_73064851
transcript_137765.known	chr3	+	1033	5	FSM	ENSG00000163605.15	ENST00000470976.1	1033	5	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_2	34.8173807171074	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATATAGCAAAGTAAGAAT	-15	True	NA	NA	False	NA	NA	NA	72996817	73061454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022
transcript_137769.known	chr3	+	1679	1	FSM	ENSG00000255423.1	ENST00000533473.1	1679	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCAGGTGTGGTGGCT	82	False	NA	NA	False	TTTAAA	-17	NA	73061658	73063337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_73061700_73063300
transcript_137770.known	chr3	-	4251	10	FSM	ENSG00000121440.15	ENST00000263666.9	4251	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	16.445945877403	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTCCCTTGGTTG	0	True	NA	-16	True	AATAAA	-17	NA	73624941	73382430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_73384931_73385668_73385786_73387967_73388070_73389815_73389879_73391017_73391117_73400921_73401010_73404147_73404396_73602353_73602462_73608597_73608685_73624102
transcript_137775.known	chr3	-	2425	8	FSM	ENSG00000244026.7	ENST00000459803.6	2447	8	22	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	89.2551947839361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	17	False	NA	-48	True	AATAAA	-17	NA	75435048	75421565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75427426_75427693_75427774_75427909_75429135_75429238_75430831_75430915_75432807_75432871_75434917
transcript_137777.known	chr3	-	2238	7	FSM	ENSG00000244026.7	ENST00000484945.6	2406	7	168	0	12	0	multi-exon	FALSE	canonical	3	7	junction_3	92.7930792438507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTAATCTACAGATGAT	108	False	NA	-42	True	AATAAA	-23	NA	75434957	75421559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75427426_75427693_75427774_75427909_75430831_75430915_75432807_75432871_75434917
transcript_137785.nnic	chr3	-	2143	6	FSM	ENSG00000244026.7	ENST00000689507.1	2116	6	-41	14	-41	0	multi-exon	FALSE	canonical	3	16	junction_2	83.7338641172137	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	-48	True	AATAAA	-17	NA	75435166	75421565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75429135_75429238_75430831_75430915_75432807_75432871_75434917
transcript_137799.known	chr3	-	1068	5	FSM	ENSG00000244026.7	ENST00000478666.6	2014	5	79	867	2	299	multi-exon	FALSE	canonical	3	132	junction_2	36.8739406627499	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTACTGCAGAGGTCAC	19	False	NA	NA	False	NA	NA	NA	75435046	75422418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_137800.known	chr3	-	2152	5	FSM	ENSG00000244026.7	ENST00000497543.5	2152	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	80.5543294925853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	17	False	NA	-34	True	AATAAA	-31	NA	75435048	75421551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434724
transcript_137801.nic	chr3	-	2063	5	FSM	ENSG00000244026.7	ENST00000686855.1	2026	5	-41	4	-41	0	multi-exon	FALSE	canonical	3	25	junction_2	75.9391203530828	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	-48	True	AATAAA	-17	NA	75435166	75421565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434917
transcript_137802.known	chr3	-	839	5	FSM	ENSG00000244026.7	ENST00000489609.6	876	5	37	0	13	0	multi-exon	FALSE	canonical	1	4	junction_1	84.5547160127689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTGCAGATAAAAAAGT	30	False	NA	NA	False	NA	NA	NA	75435035	75422717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423143_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_137820.nic	chr3	-	1719	4	ISM	ENSG00000244026.7	ENST00000489609.6	876	5	-94	2558	-41	0	5prime_fragment	FALSE	canonical	3	132	junction_1	37.8505834389203	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCTTTCTTCAGATAC	NA	False	NA	NA	False	AAAAAG	-29	NA	75435166	75425275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_75426600_75430831_75430915_75432807_75432871_75434917
transcript_137825.nnic	chr3	+	1202	3	NIC	ENSG00000272690.6	novel	1126	8	NA	NA	0	559	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGTTGCCAGTGCAGA	NA	False	NA	NA	False	AATAAA	-16	NA	75435307	75538588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_75435414_75443507_75443647_75537631
transcript_137826.known	chr3	+	532	4	FSM	ENSG00000272690.6	ENST00000659018.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8.04155872120988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAGGATGAGTTATCT	NA	False	NA	5	True	AATAAA	-16	NA	75435333	75452651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75435414_75443507_75443647_75451209_75451403_75452531
transcript_137827.known	chr3	-	201	2	FSM	ENSG00000272710.2	ENST00000608389.1	201	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTTCCTGGCTGCA	NA	False	NA	0	True	TATAAA	-22	NA	75579999	75540048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75540228_75579977
transcript_137828.known	chr3	+	1344	6	FSM	ENSG00000242516.3	ENST00000463183.2	1344	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.56417109729742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	102	False	NA	30	True	AATAAA	-34	NA	75672390	75679314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75675967_75676129_75678832
transcript_137829.known	chr3	+	1767	5	FSM	ENSG00000242516.3	ENST00000669013.1	1767	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	13.8991906239176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTGTATAATGACTT	296	False	NA	21	True	TATAAA	-17	NA	75672584	75680092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75678832
transcript_137830.known	chr3	+	880	5	FSM	ENSG00000242516.3	ENST00000662338.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.75925291729789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	406	False	NA	30	True	AATAAA	-34	NA	75672694	75679314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967_75676129_75678832
transcript_137831.known	chr3	+	716	4	FSM	ENSG00000242516.3	ENST00000665741.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.93310961716756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	395	False	NA	16	True	AATAAA	-20	NA	75672683	75679300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75678832
transcript_137838.known	chr3	-	5600	29	FSM	ENSG00000169855.21	ENST00000495273.5	5600	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	62.1980871154116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAACCATTATACCTTAC	11	True	NA	NA	False	NA	NA	NA	79019015	78598687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631306_78633934_78634043_78635772_78636109_78639743_78639899_78646147_78646191_78651731_78651930_78657097_78657270_78659685_78659808_78661029_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396_78714525_78717274_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
transcript_13784.known	chr1	-	2631	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	45.3281265138373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	0	True	NA	-3	True	AATAAA	-15	NA	153958612	153947674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
transcript_137844.nic	chr3	-	3388	5	ISM	ENSG00000169855.21	ENST00000495273.5	5600	29	-463	117016	-19	-22816	5prime_fragment	FALSE	canonical	3	165	junction_2	12.1526746027366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGCAC	564	False	NA	NA	False	AATACA	-5	NA	79019478	78715703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
transcript_137846.nic	chr3	-	1755	3	ISM	ENSG00000169855.21	ENST00000495273.5	5600	29	-584	147978	-140	-53778	5prime_fragment	FALSE	canonical	3	181	junction_1	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTAGATTATTTTCAAT	443	False	NA	NA	False	AAAAAG	-8	NA	79019599	78746665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_78746901_78938600_78938928_79018406
transcript_137848.known	chr3	-	7483	29	FSM	ENSG00000169855.21	ENST00000618846.4	7483	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	76.5806480990159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATCTTTCTTTCTTG	1	True	NA	-25	True	ATTAAA	-10	NA	79019459	78597245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631302_78633930_78634043_78635772_78636109_78639743_78639899_78646147_78646191_78651731_78651930_78657097_78657270_78659685_78659801_78661025_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396_78714525_78717274_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
transcript_137849.known	chr3	-	2941	16	FSM	ENSG00000114480.13	ENST00000429644.7	2941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.065364533659	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGCTAATGTTTAT	3	True	NA	-5	True	AATAAA	-15	NA	81761645	81489702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_81490464_81499109_81499228_81535194_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_137852.known	chr3	+	2644	7	FSM	ENSG00000083937.10	ENST00000676705.1	2644	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.871664578939	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	11	True	NA	24	True	AATAAA	-14	NA	87227311	87255486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_87227557_87240326_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_137858.known	chr3	+	2590	6	FSM	ENSG00000083937.10	ENST00000263780.9	2590	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	23.2671442166846	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAAGAATGATCTT	8	True	NA	94	True	ATTAAA	-22	NA	87227308	87255556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_137862.known	chr3	+	5899	5	FSM	ENSG00000083937.10	ENST00000677929.1	5899	5	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	25.7342184649155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATGTGGGAGCTTT	-16	True	NA	-47	True	NA	NA	NA	87227284	87255415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874_87253511_87253711
transcript_137863.known	chr3	+	2528	5	FSM	ENSG00000083937.10	ENST00000471660.5	2528	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	193.089843078293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTTCAAAAGA	-30	True	NA	86	True	ATTAAA	-14	NA	87227270	87255548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_87227557_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_137866.nic	chr3	+	630	4	ISM	ENSG00000083937.10	ENST00000677929.1	5899	5	-22	5492	-8	2888	5prime_fragment	FALSE	canonical	3	439	junction_3	29.4882274061286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCAGAATTTCCAGAAG	-38	True	NA	NA	False	NA	NA	NA	87227262	87249923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874
transcript_137867.nic	chr3	+	380	2	ISM	ENSG00000083937.10	ENST00000676947.1	1297	3	-107	5947	-8	-5947	5prime_fragment	FALSE	canonical	3	511	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGGTAAGTAGAACGTT	-38	True	NA	NA	False	AAGAAA	-3	NA	87227262	87240784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_87227557_87240698
transcript_137868.known	chr3	+	6460	9	FSM	ENSG00000175105.8	ENST00000636215.2	6460	9	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_7	8.90224690738243	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTCAATTTTATGT	-11	True	NA	16	True	AATAAA	-17	NA	88059254	88144660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133_88126270_88128808_88129012_88129686_88129827_88135060_88135203_88138704_88141049_88141644
transcript_137870.known	chr3	-	4548	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	391.091634616066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATCTTACTGAGTTAT	-24	True	NA	45	True	AATATA	-19	NA	88059005	88051949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
transcript_137871.known	chr3	-	1063	4	FSM	ENSG00000163320.12	ENST00000462901.5	1063	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	356.382753043223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTTGATTGTGTGG	-14	False	NA	-24	True	ATTAAA	-1	NA	88149885	88055425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_88056000_88058018_88058224_88140969_88141079_88149710
transcript_137875.known	chr3	-	4495	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	92.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-1	True	NA	51	True	AATATA	-25	NA	88059048	88051943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_88056000_88058018_88058224_88058814
transcript_137879.known	chr3	+	2414	3	FSM	ENSG00000179021.10	ENST00000318887.8	2414	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	21.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGTATCGTTCAGAT	-18	True	NA	17	True	AATAAA	-29	NA	88149958	88157965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_88150186_88153229_88153472_88156020
transcript_137882.known	chr3	-	3432	16	FSM	ENSG00000184500.16	ENST00000650591.1	3432	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	46.8072169174322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAATTTTAAAATGCAT	149	False	NA	16	True	AATAAA	-40	NA	93973933	93873123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_93874406_93876965_93877192_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93928701_93928798_93973673
transcript_137885.known	chr3	-	3372	15	FSM	ENSG00000184500.16	ENST00000394236.9	3372	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_9	16.7650328520588	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAACTCTTCATACAAC	-19	True	NA	55	True	AATAAA	-19	NA	93973896	93873050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_93874406_93876965_93877192_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93973673
transcript_137886.known	chr3	+	3564	11	FSM	ENSG00000169379.17	ENST00000679601.1	3564	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.639787984873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTTAAGCATTTTAAAAA	-11	True	NA	NA	False	AATATA	-42	NA	93980151	94055131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_93980483_93995873_93995945_93996547_93996685_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_137887.known	chr3	+	3971	10	FSM	ENSG00000169379.17	ENST00000394222.8	3971	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.01387685344754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAGAAATGTAGTTTG	-8	True	NA	NA	False	TATAAA	-20	NA	93980154	94055678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_137894.nic	chr3	+	1080	6	ISM	ENSG00000169379.17	ENST00000679587.1	1654	9	-187	13616	0	-13532	5prime_fragment	FALSE	canonical	3	41	junction_2	9.78979060041633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGAATGATGGCAAATGT	-21	True	NA	NA	False	NA	NA	NA	93980141	94039988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94039879
transcript_137895.known	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.5565145763173	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	38	True	NA	8	True	AATAAA	-16	NA	94063060	94131832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
transcript_137898.known	chr3	+	3524	11	FSM	ENSG00000169379.17	ENST00000681380.1	3524	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.4181553500697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTTAAGCATTTTAAAAA	-21	True	NA	NA	False	AATATA	-42	NA	93980141	94055131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94037931_94038019_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_137899.known	chr3	+	3267	9	FSM	ENSG00000169379.17	ENST00000680994.1	3267	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	17.7482393492988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATACTTTTATTCTTA	-19	True	NA	-58	True	ATTAAA	-16	NA	93980143	94055213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_93980483_93995873_93995945_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_13790.nic	chr1	-	3011	13	NIC	ENSG00000160741.17	novel	2631	14	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	47.0581791214048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-29	True	NA	-3	True	AATAAA	-15	NA	153958641	153947674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
transcript_137901.known	chr3	-	3856	2	FSM	ENSG00000178700.9	ENST00000314636.3	3856	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTGAATCTCTAATA	4	True	NA	-9	True	AATAAA	-17	NA	94062916	94057921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_94061607_94062745
transcript_137903.known	chr3	-	2646	2	FSM	ENSG00000286447.1	ENST00000662485.1	2646	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATGACATTAAAAACTG	NA	False	NA	NA	False	AATAAA	-3	NA	96814407	96810837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_96813111_96814034
transcript_137908.known	chr3	+	2058	5	FSM	ENSG00000080224.18	ENST00000470610.6	2058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.11737237261468	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATTCATGTCTATATT	-4	True	NA	15	True	AATAAA	-24	NA	96814580	97244696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_96815009_96866824_96866890_96987329_96987994_97226263_97226420_97243951
transcript_137911.known	chr3	+	3988	8	FSM	ENSG00000113966.10	ENST00000463745.6	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	8.28817697392016	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGTGATTAAGAAATGG	-7	True	NA	52	True	AATAAA	-35	NA	97764757	97801229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_137918.nic	chr3	+	432	2	ISM	ENSG00000080200.10	ENST00000389622.7	10779	22	-51	101754	-51	-98031	5prime_fragment	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATGTACTTTCATCAG	NA	False	NA	NA	False	NA	NA	NA	97821959	97843230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_97822356_97843194
transcript_137920.known	chr3	-	4854	10	FSM	ENSG00000170854.18	ENST00000394198.7	4854	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	10.3076143496081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-2	True	NA	-6	True	AATAAA	-17	NA	97972431	97941817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_137921.known	chr3	-	2232	10	FSM	ENSG00000170854.18	ENST00000360258.8	2232	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	40.6159367857945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGTCTTCGAGTTT	342	False	NA	NA	False	TATAAA	-11	NA	97972087	97944559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
transcript_137931.nic	chr3	-	1799	9	NIC	ENSG00000170854.18	novel	4854	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	86	junction_3	10.5593560409714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTTCGCTTCCCTTTGT	-12	True	NA	NA	False	AATAAA	-19	NA	97972441	97945337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_137935.known	chr3	-	2709	7	FSM	ENSG00000080819.9	ENST00000647941.2	2709	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	7.20532210707243	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTATATTTTTTGT	-1	True	NA	NA	False	AATAAA	-23	NA	98593611	98579445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98580771_98581406_98581512_98585440_98585660_98588712_98588855_98590631_98590743_98591011_98591156_98592948
transcript_137938.known	chr3	-	2170	6	FSM	ENSG00000080822.17	ENST00000394181.6	2170	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	398.327202184335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATTGTATATAGAGTGT	-1	True	NA	-12	True	AATAAA	-19	NA	98523018	98515482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521697_98522848
transcript_137940.known	chr3	-	916	5	FSM	ENSG00000080822.17	ENST00000508902.5	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	333.541976368792	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	1	True	NA	NA	False	NA	NA	NA	98523041	98516710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98522848
transcript_137941.known	chr3	-	582	5	FSM	ENSG00000080822.17	ENST00000512147.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	337.739914727294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	-8	True	NA	NA	False	NA	NA	NA	98522899	98516710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98522848
transcript_137942.known	chr3	-	815	4	FSM	ENSG00000080822.17	ENST00000507411.5	815	4	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	62.3983618018579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAGAGCTCCCTGAC	16	True	NA	NA	False	NA	NA	NA	98522875	98516822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98517190_98518884_98518996_98521132_98521443_98522848
transcript_137943.known	chr3	-	642	4	FSM	ENSG00000080822.17	ENST00000511081.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	380.527119781086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTATTTTATTTATAC	-14	True	NA	43	True	NA	NA	NA	98522905	98516543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98522848
transcript_137944.known	chr3	-	6128	16	FSM	ENSG00000057019.16	ENST00000326840.11	6128	16	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_13	36.8598547052059	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTATGGCCAATATTG	-16	True	NA	1	True	TATAAA	-28	NA	98901695	98795940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98799842_98800578_98800717_98801599_98801650_98808080_98808175_98811193_98811320_98811467_98811555_98812331_98812483_98817768_98817894_98819201_98819418_98820247_98820289_98822227_98822362_98822668_98822742_98825314_98825367_98849460_98849599_98881539_98881768_98901121
transcript_137961.nic	chr3	-	1496	8	ISM	ENSG00000057019.16	ENST00000326857.9	3959	16	-415	21425	-46	3101	5prime_fragment	FALSE	canonical	3	342	junction_5	30.8518513981556	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGGTTAAGAGACAAAA	266	False	NA	NA	False	AATAGA	-21	NA	98901741	98819207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_98819418_98820247_98820289_98822227_98822362_98822668_98822742_98825314_98825367_98849460_98849599_98881539_98881768_98901121
transcript_137973.known	chr3	+	2837	11	FSM	ENSG00000064225.13	ENST00000469105.5	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.3061338152243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTTGATTACTGACA	5	True	NA	7	True	AATAAA	-24	NA	98732265	98795254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98771120_98771191_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_137976.known	chr3	+	2109	11	FSM	ENSG00000064225.13	ENST00000394162.5	3571	11	10	1452	0	449	multi-exon	FALSE	canonical	1	1	junction_1	17.4014367222939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGGCTTTGTATTAT	6	True	NA	NA	False	AGTAAA	-29	NA	98732713	98794393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_98733012_98756368_98756541_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_137977.known	chr3	-	524	4	FSM	ENSG00000239445.6	ENST00000475816.5	524	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTATTTTTGTGTG	1193	False	NA	NA	False	ACTAAA	-13	NA	98732508	98714331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98714499_98715375_98715522_98715649_98715778_98732425
transcript_137979.known	chr3	+	5705	5	FSM	ENSG00000144810.16	ENST00000261037.7	5705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.92028643696715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTCGTATCATTCAGT	-1	True	NA	NA	False	ATTAAA	-24	NA	99638474	99799226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_99638665_99675659_99675722_99744896_99745022_99790679_99791011_99794229
transcript_137980.known	chr3	+	3029	4	FSM	ENSG00000144810.16	ENST00000273342.8	3029	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCCTCGTCAGAATTG	2	True	NA	NA	False	NA	NA	NA	99638595	99796733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_99638665_99744896_99745022_99790679_99791011_99794229
transcript_137981.nnic	chr3	+	1260	11	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_2	214.014111684253	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCCTTGTTGAGCGGAC	-13	True	NA	26	True	AATAAA	-18	NA	99817820	100178599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_137984.nnic	chr3	+	388	4	NNC	ENSG00000184220.12	novel	397	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	247.731485461354	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAAAAGAGAATA	-13	True	NA	24	True	NA	NA	NA	99817820	100160455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429
transcript_137985.known	chr3	+	3656	18	FSM	ENSG00000036054.13	ENST00000344949.9	3656	18	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_14	24.2170119506943	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCTCTCTTTCT	-5	True	NA	35	True	AATAAA	-32	NA	100261000	100325251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_137987.known	chr3	+	7233	10	FSM	ENSG00000114021.12	ENST00000394140.9	7233	10	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	41.4165828302304	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGAAAACAGTGCCTT	24	True	NA	NA	False	AGTAAA	-25	NA	100334756	100361635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_137988.nic	chr3	+	1250	10	NIC	ENSG00000114021.12	novel	7233	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	114.845575329829	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	37	False	NA	10	True	ATTAAA	-15	NA	100334769	100355351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_100335113_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_137989.nnic	chr3	+	1270	10	NNC	ENSG00000114021.12	novel	7233	10	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_1	121.16420854402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	47	False	NA	10	True	ATTAAA	-15	NA	100334779	100355351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_100335143_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_137990.nnic	chr3	+	1302	10	NNC	ENSG00000114021.12	novel	7233	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	120.862640124142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	-2	True	NA	10	True	ATTAAA	-15	NA	100334783	100355351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_100335179_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_137991.known	chr3	+	1469	9	FSM	ENSG00000114021.12	ENST00000465368.5	1469	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	43.8347393627474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	6	True	NA	10	True	ATTAAA	-15	NA	100334738	100355351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_137998.known	chr3	-	4100	12	FSM	ENSG00000154174.8	ENST00000284320.6	4100	12	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_9	28.3196045170126	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTAGGCTGGGCATG	-1	True	NA	21	True	AATAAA	-45	NA	100401089	100363430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_100365718_100368043_100368167_100369037_100369136_100372605_100372723_100373537_100373646_100375017_100375153_100377704_100377913_100381614_100381764_100384478_100384589_100386217_100386345_100386804_100386979_100400625
transcript_138003.nic	chr3	-	1226	4	ISM	ENSG00000154174.8	ENST00000284320.6	4100	12	-357	21054	-357	-7069	5prime_fragment	FALSE	canonical	3	270	junction_1	19.2238278070616	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGTAAATTGATCTGA	-28	True	NA	NA	False	GATAAA	-40	NA	100401446	100384484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_100384589_100386217_100386345_100386804_100386979_100400625
transcript_138004.known	chr3	+	1864	4	FSM	ENSG00000206535.8	ENST00000383693.8	1864	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.64997911442	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGAGTTTACTTTCTTA	-21	True	NA	19	True	AATAAA	-15	NA	100401538	100456319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100402440_100429696_100429886_100451718_100451950_100455776
transcript_138007.known	chr3	+	1723	4	FSM	ENSG00000206535.8	ENST00000466996.5	1723	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	19.3620476419435	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTATTTTAATAGAATAAA	-28	True	NA	NA	False	AATAAA	-10	NA	100401531	100456188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100402440_100429696_100429886_100451735_100451950_100455776
transcript_138008.nnic	chr3	+	1773	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	34.296501279285	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	NA	False	NA	16	True	AATAAA	-25	NA	100492559	100577444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_138009.known	chr3	+	1567	6	FSM	ENSG00000181458.10	ENST00000323523.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	27.9614019677126	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	6	True	NA	16	True	AATAAA	-25	NA	100492618	100577444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_138012.known	chr3	+	2015	9	FSM	ENSG00000114354.15	ENST00000674758.1	2015	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	405.130457383791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	38	False	NA	18	True	AATAAA	-15	NA	100709471	100748964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709722_100710970_100711069_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_138016.known	chr3	+	1753	8	FSM	ENSG00000114354.15	ENST00000418917.7	1753	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	368.37093106968	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	-4	True	NA	18	True	AATAAA	-15	NA	100709352	100748964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744837_100744932_100748148
transcript_138017.known	chr3	+	1783	8	FSM	ENSG00000114354.15	ENST00000476228.5	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	232.520264642434	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	55	True	NA	18	True	AATAAA	-15	NA	100709605	100748964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_138018.known	chr3	+	1793	8	FSM	ENSG00000114354.15	ENST00000676431.1	1793	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	359.181098089097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	29	False	NA	18	True	AATAAA	-15	NA	100709462	100748964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_138019.known	chr3	+	2005	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	301.330315739511	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	294	False	NA	18	True	AATAAA	-15	NA	100709969	100748964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_138023.known	chr3	-	4703	23	FSM	ENSG00000138468.16	ENST00000394094.6	4703	23	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	19.7477899171419	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	-8	True	NA	NA	False	ATTAAA	-21	NA	101513205	101324272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
transcript_138025.known	chr3	+	1813	2	FSM	ENSG00000174173.7	ENST00000309922.7	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAGCCATTCAAGCA	-4	True	NA	26	True	AGTAAA	-23	NA	101561867	101566446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101562004_101564769
transcript_138033.known	chr3	+	2285	5	FSM	ENSG00000081154.12	ENST00000265260.8	2285	5	0	0	0	0	multi-exon	FALSE	canonical	3	1903	junction_1	270.033678455114	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTTACTGGTTTTTG	-9	True	NA	37	True	AATAAA	-43	NA	101574179	101594465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101579789_101580005_101585436_101585512_101590214_101590271_101592626
transcript_138035.known	chr3	+	2165	5	FSM	ENSG00000081154.12	ENST00000460231.5	2165	5	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	804.80261555241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	1	True	NA	-21	True	NA	NA	NA	101574189	101594407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101579841_101580005_101585436_101585512_101590214_101590271_101592626
transcript_138037.known	chr3	+	786	5	FSM	ENSG00000081154.12	ENST00000498274.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	1051.01546135154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGGTGGGTGTAAAG	-3	True	NA	-57	True	ATTAAA	-18	NA	101574185	101592771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101579588_101580005_101585436_101585512_101590214_101590271_101592626
transcript_138043.known	chr3	+	2028	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1160.24432292896	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTTATTTTCTATT	5	True	NA	9	True	AATAAA	-15	NA	101574193	101594437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
transcript_138045.known	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	40	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101576500_101576900
transcript_138046.known	chr3	-	5657	11	FSM	ENSG00000066422.6	ENST00000312938.5	5657	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	10.1828286836222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAAGAACGCAGGTACC	2	True	NA	NA	False	NA	NA	NA	101677132	101648888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101651684_101652495_101652672_101652779_101652939_101654703_101654822_101656103_101656249_101659782_101660029_101664537_101664715_101664963_101665809_101671129_101671362_101671977_101672214_101676604
transcript_138047.known	chr3	-	2115	2	FSM	ENSG00000066422.6	ENST00000461821.1	2115	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATGTCTTATTTTGT	9594	False	NA	NA	False	AATAAA	-18	NA	101677118	101670612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101672214_101676604
transcript_138049.known	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	4949	junction_5	1250.11893834147	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-6	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_13805.known	chr1	+	1750	10	FSM	ENSG00000143578.16	ENST00000271889.8	1750	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	43.7975138817516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	22	False	NA	20	True	AATAAA	-15	NA	153967920	153974359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153968185_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_138051.known	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	3134.19330729615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	7	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_138054.known	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7222	junction_1	491.122693428027	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	0	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
transcript_138057.known	chr3	+	1704	3	FSM	ENSG00000244119.2	ENST00000667844.1	1704	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	3939	False	NA	NA	False	NA	NA	NA	101686826	101700926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101687390_101692802_101692970_101699952
transcript_138058.known	chr3	+	3923	12	FSM	ENSG00000144802.11	ENST00000326172.9	3923	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_9	11.0558312649333	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCTTACATGCATT	0	True	NA	19	True	AATAAA	-15	NA	101849513	101861022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101849918_101852084_101852225_101852737_101852769_101852885_101852990_101853090_101853864_101854577_101854684_101855061_101855209_101855394_101855459_101855732_101855903_101857072_101857184_101857291_101857460_101859317
transcript_138063.known	chr3	+	8568	8	FSM	ENSG00000144815.17	ENST00000273347.10	8568	8	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_6	28.6156800173811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTTTTTCT	8	True	NA	NA	False	ATTAAA	-17	NA	101779210	101828231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_138068.known	chr3	+	8074	8	FSM	ENSG00000144815.17	ENST00000491511.6	8074	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	48.0883540570726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACCATTGCTTTATTTA	-20	True	NA	8	True	AATAAA	-16	NA	101779441	101827392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101779901_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_138076.nnic	chr3	+	1595	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-10	4901	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	56.0049997768056	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGATGAAATAATAAAAAAT	-11	True	NA	NA	False	AATAAA	-16	NA	101779191	101806201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_138077.nnic	chr3	+	2404	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-10	5710	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	56.0049997768056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTGAACCTGAGCTTG	-11	True	NA	4	True	AATAAA	-21	NA	101779191	101807010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_138079.nic	chr3	+	1701	6	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-19	20956	-10	5975	5prime_fragment	FALSE	canonical	3	107	junction_5	24.8241817589221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATCTTATGTGCATAAT	-11	True	NA	NA	False	ATTAAA	-22	NA	101779191	101807275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052
transcript_13808.known	chr1	+	1749	10	FSM	ENSG00000143578.16	ENST00000368607.8	1749	10	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_1	40.879225911349	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	3	True	NA	20	True	AATAAA	-15	NA	153967901	153974359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153968165_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_138080.known	chr3	+	936	6	FSM	ENSG00000144815.17	ENST00000474165.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	67.0074622710038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAGGAATTAGCCGAAA	1	True	NA	NA	False	NA	NA	NA	101779245	101801300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101779325_101779733_101779935_101782109_101782291_101782659_101782781_101785401_101785690_101801234
transcript_138087.known	chr3	+	4701	16	FSM	ENSG00000170017.12	ENST00000306107.9	4701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	53.9684681601725	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTCCCACAGCTGTCT	5	True	NA	17	True	AATAAA	-18	NA	105366908	105576900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_105367482_105520066_105520168_105524288_105524509_105532001_105532067_105533602_105533691_105534662_105534846_105539974_105540103_105541632_105541766_105545222_105545336_105547148_105547285_105547389_105547524_105550126_105550260_105552143_105552183_105552467_105552586_105571851_105571965_105574476
transcript_138092.known	chr3	-	3669	20	FSM	ENSG00000114423.23	ENST00000646825.1	3669	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.7349569716899	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTAATGCAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	105869039	105658414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_105659230_105670232_105670353_105671023_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
transcript_138094.known	chr3	-	6749	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	29.6631812351213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	-15	True	NA	NA	False	TATAAA	-17	NA	105869012	105655460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
transcript_138105.known	chr3	+	5519	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCGCCCGCCTG	0	True	NA	NA	False	NA	NA	NA	107240663	107251102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107241088_107246007
transcript_138107.known	chr3	+	1038	4	FSM	ENSG00000243701.8	ENST00000653298.1	1038	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTGATATCTTCATGA	-1	True	NA	NA	False	AATAAA	-16	NA	107240691	107285662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107241088_107246007_107246053_107248577_107248832_107285319
transcript_138108.known	chr3	+	9009	18	FSM	ENSG00000114439.19	ENST00000325805.13	9009	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	9.33201506590679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTCCCCCTAAACTG	-10	True	NA	21	True	AATAAA	-34	NA	107522961	107811339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_13811.known	chr1	+	1496	10	FSM	ENSG00000143578.16	ENST00000368600.7	1496	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	55.6891726515782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCAGAAGTTTGAAAT	-9	True	NA	22	True	AATAAA	-17	NA	153968242	153974361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153968311_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_138110.known	chr3	+	8930	17	FSM	ENSG00000114439.19	ENST00000415149.6	8930	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	8.09296569559021	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAACATCGAATGATG	NA	False	NA	6	True	AATAAA	-19	NA	107522935	107811324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_13812.known	chr1	+	1557	10	FSM	ENSG00000143578.16	ENST00000368603.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.4483144552889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	338	False	NA	17	True	AATAAA	-12	NA	153968236	153974356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153968311_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_138129.known	chr3	+	1586	11	FSM	ENSG00000114439.19	ENST00000402163.6	1586	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.7078715763105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	7	True	NA	6	True	ATTAAA	-12	NA	107525401	107773066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107525488_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_138131.known	chr3	-	5292	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	26.6953179415417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	6391	False	108091051	NA	False	ATTAAA	-19	NA	108091031	108043090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_138133.known	chr3	-	5228	9	FSM	ENSG00000196776.17	ENST00000355354.13	5228	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	36.9653554020518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-22	True	NA	NA	False	ATTAAA	-19	NA	108091025	108043090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108047293_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_138138.known	chr3	-	3057	11	FSM	ENSG00000114446.5	ENST00000264538.4	3057	11	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_4	34.6907768722466	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTATTTTCTTCCATC	-2	True	NA	NA	False	AATAAA	-16	NA	108222424	108160811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_138144.known	chr3	-	755	4	FSM	ENSG00000114446.5	ENST00000465024.1	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	15.369522511198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTGAGTATCATCATT	186	False	NA	NA	False	AATATA	-41	NA	108222360	108213798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108214022_108218534_108218654_108219409_108219573_108222110
transcript_138146.known	chr3	-	931	7	FSM	ENSG00000114446.5	ENST00000478157.1	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	151.888939689498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTAAGAATGATTTCC	-13	True	NA	NA	False	NA	NA	NA	108222435	108166853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108222110
transcript_138147.nic	chr3	-	2515	19	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-45	3784	-27	-2532	5prime_fragment	TRUE	canonical	3	39	junction_7	8.42266929332331	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCTTCTTATTTAA	369	False	NA	NA	False	NA	NA	NA	108589483	108553647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_138148.nic	chr3	-	2457	19	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-45	3842	-27	-2590	5prime_fragment	FALSE	canonical	3	39	junction_7	8.42266929332331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAACAGAGAAAAGAAGT	369	False	NA	NA	False	AATAGA	-5	NA	108589483	108553705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_138152.nic	chr3	-	2432	18	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-45	4512	-27	-3260	5prime_fragment	FALSE	canonical	3	39	junction_6	8.43046050698665	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTCTAGTTCTATA	369	False	NA	NA	False	AAAAAG	-33	NA	108589483	108554375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_138153.known	chr3	-	2014	14	FSM	ENSG00000163507.15	ENST00000487834.5	2014	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.4123549890835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTTTAACTCCTCAT	-5	True	NA	NA	False	NA	NA	NA	108589644	108560734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108560842_108563121_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_138154.known	chr3	+	5304	33	FSM	ENSG00000198919.13	ENST00000361582.8	5304	33	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_21	24.0473978581883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	-3	True	NA	5	True	AATAAA	-16	NA	108589721	108694840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_138159.nic	chr3	+	2363	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-211	46728	-194	0	5prime_fragment	FALSE	canonical	3	126	junction_1	15.0176192816601	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	-3	True	NA	NA	False	NA	NA	NA	108589510	108648112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_138160.nic	chr3	+	3049	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-43	45874	-26	854	intron_retention	FALSE	canonical	3	126	junction_1	15.0176192816601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACTATAATAGCATTATA	-10	True	NA	NA	False	AATAAA	-8	NA	108589678	108648966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_138161.known	chr3	+	2076	16	FSM	ENSG00000198919.13	ENST00000479138.5	2076	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	36.6627876736071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	34	False	NA	NA	False	NA	NA	NA	108590054	108648112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_138167.known	chr3	-	1383	9	FSM	ENSG00000163530.4	ENST00000478945.1	1383	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_8	11.3219918742243	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-8	True	NA	-7	True	AATAAA	-22	NA	109316517	109293787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316283
transcript_13818.known	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_7	33.1003421894884	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	1	True	NA	-33	True	ATTAAA	-20	NA	153986339	153981649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
transcript_138186.nic	chr3	-	2504	7	NIC	ENSG00000121570.13	novel	2788	7	NA	NA	0	-211	combination_of_known_junctions	FALSE	canonical	3	172	junction_6	1219.21018377564	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGTGTATTGTTCCTT	0	True	NA	-32	True	AATAAA	-20	NA	109337546	109326354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333921_109337463
transcript_138187.known	chr3	-	2817	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-3	-26	3	multi-exon	FALSE	canonical	3	2818	junction_3	421.61317183725	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGTTTATTTACTC	14	False	NA	-4	True	AATAAA	-21	NA	109337572	109326140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_138201.known	chr3	-	1087	6	FSM	ENSG00000121570.13	ENST00000463966.5	1087	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	1319.702542242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTATTTTTAGTA	-10	True	NA	NA	False	NA	NA	NA	109337522	109327524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109328025_109328889_109329082_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_138222.known	chr3	-	1225	5	FSM	ENSG00000121570.13	ENST00000478791.1	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	2818	junction_1	201.413132640352	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGGGACCACAGTTT	-3	True	NA	NA	False	NA	NA	NA	109337515	109329975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_138237.known	chr3	-	680	2	FSM	ENSG00000121570.13	ENST00000489281.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	2843	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTACAGGCTGGTTTT	1	True	NA	NA	False	AGTAAA	-13	NA	109337545	109333395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109333994_109337463
transcript_138241.nnic	chr3	-	1552	3	NIC	ENSG00000242242.7	novel	1415	4	NA	NA	-76420	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_1	4	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGAACTTTTACTC	1485	False	NA	-16	True	AGTAAA	-17	NA	110969896	110892139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_110892604_110893137_110893831_110969501
transcript_138242.known	chr3	+	5197	6	FSM	ENSG00000177707.11	ENST00000485303.6	5197	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	9.72419662491457	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTAATAAGTTCAT	11	True	NA	14	True	AATAAA	-25	NA	111071815	111137560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111072178_111112029_111112372_111118655_111118953_111122120_111122239_111126183_111126336_111133634
transcript_138245.known	chr3	+	434	2	FSM	ENSG00000240891.8	ENST00000474484.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGTAGTATTTTGT	-1	True	NA	9	True	AATAAA	-19	NA	111732460	111778458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111732704_111778267
transcript_138247.known	chr3	+	5543	18	FSM	ENSG00000144824.21	ENST00000393925.7	5543	18	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	23.4238809912457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCACATTTGAAAATAAA	0	True	NA	3	True	ATTAAA	-12	NA	111859795	111976247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
transcript_138256.nic	chr3	+	2568	8	ISM	ENSG00000144824.21	ENST00000393925.7	5543	18	-102	35630	-56	-4823	5prime_fragment	FALSE	canonical	3	76	junction_5	22.5134880206765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATTTAATAATGATGT	404	False	NA	NA	False	AAGAAA	-2	NA	111859693	111940617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534
transcript_138264.nic	chr3	+	2021	4	ISM	ENSG00000144824.21	ENST00000393925.7	5543	18	-102	57073	-56	1511	5prime_fragment	FALSE	canonical	3	90	junction_1	19.09624744987	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGACATAAATGATCAG	404	False	NA	NA	False	NA	NA	NA	111859693	111919174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071
transcript_138265.known	chr3	+	2604	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_4	13.6816482925121	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	-3	True	NA	33	True	AATAAA	-24	NA	111979025	111993368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
transcript_138267.known	chr3	+	1339	4	FSM	ENSG00000144827.9	ENST00000491580.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	99.2717930173969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAAATTGAGCTTT	-19	True	NA	NA	False	TATAAA	-15	NA	111979009	111992271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111979204_111986263_111986376_111986913_111987052_111991376
transcript_138269.known	chr3	+	890	3	FSM	ENSG00000144827.9	ENST00000493784.1	890	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	100	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACCTTTCTTATGCTTA	23	True	NA	NA	False	ATTAAA	-28	NA	111979051	111991976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111979204_111986913_111987052_111991376
transcript_138270.known	chr3	+	1488	5	FSM	ENSG00000144834.14	ENST00000393917.6	1488	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.12414379544733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTAAAGTTCATTCTT	0	True	NA	8	True	AATAAA	-20	NA	111998738	112013887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111999115_111999246_111999603_112000771_112000947_112011762_112011866_112013409
transcript_138271.known	chr3	+	1129	5	FSM	ENSG00000144834.14	ENST00000478951.6	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.35607132140714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAAAGTTCATTC	-16	True	NA	6	True	AATAAA	-18	NA	111998921	112013885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111999115_111999420_111999603_112000771_112000947_112011762_112011866_112013409
transcript_138272.known	chr3	+	1164	4	FSM	ENSG00000144834.14	ENST00000455401.6	1164	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACAGTGTAAAGTTC	223	False	NA	2	True	AATAAA	-14	NA	111999188	112013881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111999603_112000771_112000947_112011762_112011866_112013409
transcript_138273.known	chr3	+	2237	6	FSM	ENSG00000114529.13	ENST00000264848.10	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	12.0099958368019	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	0	True	NA	20	True	AATACA	-17	NA	112086388	112118210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
transcript_138277.known	chr3	+	1524	7	FSM	ENSG00000091972.18	ENST00000473539.5	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	121.667579905248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTACTGCTTTGCTAA	-16	True	NA	NA	False	NA	NA	NA	112333155	112362132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112333225_112335942_112336018_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_138281.known	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	71.8871337584133	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	-16	True	NA	28	True	ATTAAA	-16	NA	112333155	112362812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_138287.known	chr3	+	2017	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	94.4176228254027	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	6	True	NA	25	True	ATTAAA	-13	NA	112333177	112362809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
transcript_138289.known	chr3	-	1568	12	FSM	ENSG00000144848.11	ENST00000283290.10	1568	12	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_11	37.944936181501	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-47	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
transcript_138290.nic	chr3	-	1179	12	NIC	ENSG00000144848.11	novel	1568	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	195.078666056576	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-47	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561845
transcript_138291.nnic	chr3	-	1518	11	NIC	ENSG00000144848.11	novel	1568	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_9	201.550217067608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-47	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112558375_112558418_112561456
transcript_138295.known	chr3	+	4366	7	FSM	ENSG00000138459.9	ENST00000492406.6	4366	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	20.6619618300554	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCGAAGTTCTGATATGT	2	True	NA	NA	False	AATAAA	-19	NA	112562044	112585579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112581327_112582670
transcript_138297.known	chr3	-	12301	8	FSM	ENSG00000091986.16	ENST00000206423.8	12301	8	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_7	5.32993088747932	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTGTGGAGTCTGG	-4	True	NA	-2	True	AATAAA	-13	NA	112641143	112596796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640326
transcript_138298.nic	chr3	-	2719	2	ISM	ENSG00000091986.16	ENST00000206423.8	12301	8	-157	41375	0	1228	5prime_fragment	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAGAAGAGCAAGAA	-1	True	NA	93	True	AAAAAG	-10	NA	112641300	112638171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_112639917_112640326
transcript_138299.known	chr3	-	1010	2	FSM	ENSG00000091986.16	ENST00000475181.1	1010	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAGGACGATGTGT	334	False	NA	NA	False	NA	NA	NA	112641056	112639399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_112639917_112640563
transcript_138300.nic	chr3	-	2643	2	ISM	ENSG00000091986.16	ENST00000206423.8	12301	8	-157	41451	0	1152	5prime_fragment	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGAATGAGAACGCAG	-1	True	NA	17	True	AAAAAG	-42	NA	112641300	112638247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_112639917_112640326
transcript_138302.known	chr3	-	4820	9	FSM	ENSG00000163608.15	ENST00000314400.10	4820	9	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_7	21.759696114606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-7	True	NA	-5	True	ATTAAA	-18	NA	113019671	113002443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113017447_113017603_113019541
transcript_138305.known	chr3	-	2056	8	FSM	ENSG00000163608.15	ENST00000473284.5	2056	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	31.3453443472057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	NA	False	NA	NA	False	NA	NA	NA	113019861	113005242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_138307.known	chr3	-	1382	8	FSM	ENSG00000163608.15	ENST00000462295.5	1382	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	49.4525127815378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGAACTGCTAAGATCT	-2	True	NA	NA	False	NA	NA	NA	113019666	113005480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011166_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_138308.known	chr3	-	1817	8	FSM	ENSG00000163608.15	ENST00000469169.5	1817	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	50.6778541175451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	0	True	NA	NA	False	NA	NA	NA	113019664	113005242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013362_113013952_113014033_113019541
transcript_138313.known	chr3	-	4672	7	FSM	ENSG00000163608.15	ENST00000383675.6	4672	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	49.1169239898247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	NA	False	NA	-5	True	ATTAAA	-18	NA	113019733	113002443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113017447_113017603_113019541
transcript_138315.known	chr3	+	1921	6	FSM	ENSG00000163607.18	ENST00000383678.8	1921	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	23.8713217061812	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTTTTCTTTAGA	3	True	NA	3	True	ATTAAA	-13	NA	112990983	113001969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_138322.nic	chr3	+	751	5	ISM	ENSG00000163607.18	ENST00000383678.8	1921	6	-53	2508	-53	-1458	5prime_fragment	FALSE	canonical	3	194	junction_2	22.5983959607756	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACAAATCTTCCAAGGGA	-9	True	NA	NA	False	CATAAA	-34	NA	112990930	112999461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445
transcript_138323.known	chr3	+	715	5	FSM	ENSG00000163607.18	ENST00000488781.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	97.9830980322627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCCGGTTTAGCTGAA	28	False	NA	NA	False	NA	NA	NA	112991008	113000919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112991336_112993025_112993125_112996891_112996992_112999445_112999565_113000849
transcript_138327.known	chr3	+	1787	5	FSM	ENSG00000163607.18	ENST00000383677.7	1787	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	89.786900492221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCTGGATAACAAATTA	4	True	NA	-31	True	ATTAAA	-13	NA	112990984	113001935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112991336_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_138332.known	chr3	-	1512	4	FSM	ENSG00000163608.15	ENST00000469809.5	1512	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.0053761110008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCATATTAAAGTGAG	6	True	NA	-50	True	NA	NA	NA	113019658	113004953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113013948_113014033_113019541
transcript_138334.known	chr3	-	1212	3	FSM	ENSG00000163608.15	ENST00000472705.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	73.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAATGAGGAGCGGGGG	0	True	NA	NA	False	NA	NA	NA	113019664	113005175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113019541
transcript_138337.known	chr3	+	679	4	FSM	ENSG00000163607.18	ENST00000295864.9	679	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	111.483930082621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGCTAACTGGAGTT	6	True	NA	NA	False	NA	NA	NA	112990986	113000960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112991336_112996891_112996992_112999445_112999565_113000849
transcript_138338.known	chr3	+	4574	20	FSM	ENSG00000144857.15	ENST00000682979.1	4574	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	4.08089936315371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCATGTGTGAGTCAG	-6	True	NA	22	True	AATAAA	-28	NA	113211556	113287459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113212017_113216186_113216275_113249721_113249900_113250554_113250834_113268298_113268446_113270800_113270945_113272409_113272704_113273068_113273342_113274374_113274683_113278094_113278258_113278672_113278784_113279248_113279456_113279823_113280006_113280557_113280664_113281030_113281154_113283410_113283633_113284334_113284568_113284781_113284859_113285371_113285566_113286674
transcript_138339.known	chr3	+	4646	20	FSM	ENSG00000144857.15	ENST00000495514.5	4646	20	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_2	3.25891064850794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCATGTGTGAGTCAG	6	True	NA	22	True	AATAAA	-28	NA	113211481	113287459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113212017_113216186_113216275_113249721_113249900_113250554_113250834_113268298_113268446_113270800_113270945_113272409_113272704_113273068_113273342_113274374_113274683_113278097_113278258_113278672_113278784_113279248_113279456_113279823_113280006_113280557_113280664_113281030_113281154_113283410_113283633_113284334_113284568_113284781_113284859_113285371_113285566_113286674
transcript_138351.nic	chr3	+	1823	4	ISM	ENSG00000144857.15	ENST00000495514.5	4646	20	16	35867	16	0	5prime_fragment	FALSE	canonical	1	6	junction_2	6.59966329107444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGATATAGAAATTGTG	-7	True	NA	17	True	ATTAAA	-25	NA	113211497	113251592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_113212017_113216186_113216275_113249721_113249900_113250554
transcript_138352.known	chr3	+	2173	4	FSM	ENSG00000144857.15	ENST00000485230.5	2173	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACTGCCACTTGGTG	2	True	NA	NA	False	AGTAAA	-18	NA	113211564	113252005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113212017_113216186_113216279_113249721_113249900_113250554
transcript_138356.nic	chr3	+	1711	4	NIC	ENSG00000144857.15	novel	561	3	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	5.73488351136175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGATATAGAAATTGTG	-6	True	NA	17	True	ATTAAA	-25	NA	113212118	113251592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_113212522_113216186_113216279_113249721_113249900_113250554
transcript_138359.known	chr3	-	5417	18	FSM	ENSG00000163611.11	ENST00000295872.8	5417	18	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_17	19.1034336303867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGCCAATTTTAT	15	True	NA	NA	False	AATAAA	-21	NA	113515156	113442717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113514896
transcript_138360.nic	chr3	-	3374	18	NIC	ENSG00000163611.11	novel	5417	18	NA	NA	-27	618	intron_retention	FALSE	canonical	0	0	junction_17	26.6015063184081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAAATGTGGTAACATT	NA	False	NA	-5	True	AATAAA	-20	NA	113515214	113444635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_138365.known	chr3	-	962	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_4	496.058464296296	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTCTTGTTTTTCTT	8347	False	NA	14	True	TTTAAA	-12	NA	113746300	113721655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
transcript_138368.known	chr3	-	958	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	588.956439390894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATCATGTTTGA	-13	True	NA	-33	True	NA	NA	NA	113746249	113721589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
transcript_138370.known	chr3	+	4575	15	FSM	ENSG00000114573.10	ENST00000273398.8	4575	15	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_12	20.581470763177	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTTCTTTTTCTCTT	-16	True	NA	17	True	AATAAA	-18	NA	113747034	113812056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113747114_113778740_113778836_113781049_113781179_113784223_113784439_113784695_113784834_113786231_113786384_113788712_113788876_113789731_113789841_113794871_113794995_113795089_113795205_113795875_113795940_113798242_113798447_113803582_113803678_113805353_113805526_113809334
transcript_138371.known	chr3	+	3807	18	FSM	ENSG00000178075.20	ENST00000358160.9	3807	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	3.0189711577309	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTAGTTTTTCTTCTTTT	3	True	NA	12	True	AATAAA	-16	NA	113838787	113947174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113838937_113844502_113844650_113869506_113869592_113875483_113875588_113876164_113876261_113882751_113882833_113901030_113901147_113904139_113904273_113908957_113909121_113915700_113915839_113930713_113930833_113933510_113933654_113934431_113934536_113936265_113936443_113938085_113938144_113939885_113939997_113940239_113940346_113945397
transcript_138375.known	chr3	+	4023	10	FSM	ENSG00000151576.10	ENST00000281273.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.8953443011947	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGAGATTTCTCATT	-1	True	NA	91	True	ATTAAA	-19	NA	114056736	114088422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_114056865_114056998_114057107_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_138381.known	chr3	+	3844	9	FSM	ENSG00000151576.10	ENST00000485050.5	3844	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	70.1921469966548	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	-3	True	NA	18	True	AATAAA	-20	NA	114056734	114088349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_114056865_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_138392.known	chr3	+	1046	6	FSM	ENSG00000151576.10	ENST00000493014.1	1046	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.8526402717499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAACATGGGAAGACGTG	-2	True	NA	NA	False	AATACA	-34	NA	114056781	114085952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_114056865_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_138397.known	chr3	+	1498	3	FSM	ENSG00000172020.13	ENST00000305124.11	1498	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	24.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAATGGCTCTGTGTTT	-5	True	NA	17	True	AATAAA	-17	NA	115623509	115721483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_115623720_115676012_115676611_115720793
transcript_138401.known	chr3	-	3523	7	FSM	ENSG00000144847.13	ENST00000393775.7	3523	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.52752523165195	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCATCCTGTTAAAT	-12	True	NA	NA	False	TTTAAA	-29	NA	119034846	118900556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_118902962_118904647_118904799_118905595_118905719_118926100_118926257_118928508_118928717_118930111_118930276_119034530
transcript_138403.known	chr3	+	2028	8	FSM	ENSG00000114638.8	ENST00000264234.8	2028	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.35606035749581	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTCATTTTTACCAA	12	True	NA	9	True	AGTAAA	-18	NA	119173597	119205143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119173639_119186713_119186811_119187774_119187976_119190244_119190320_119190981_119191105_119194218_119194399_119199056_119199141_119203916
transcript_138414.known	chr3	-	2385	9	FSM	ENSG00000121578.13	ENST00000359213.7	2385	9	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_6	101.969358142532	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-18	True	AATAAA	-41	NA	119240946	119211741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_138419.known	chr3	-	2494	8	FSM	ENSG00000121578.13	ENST00000483209.5	2494	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	108.950653499459	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	263	False	NA	-8	True	AGTAAA	-23	NA	119240639	119211731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240360
transcript_13842.known	chr1	-	2427	5	FSM	ENSG00000143570.19	ENST00000310483.10	2427	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	1120.62683351774	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTACAGTATCTGATT	16	True	NA	-14	True	AATAAA	-14	NA	153967712	153959111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153967385
transcript_138422.known	chr3	-	2234	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	56.6352453901999	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-1	True	NA	-18	True	AATAAA	-41	NA	119240878	119211741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_138424.nic	chr3	-	2246	8	NIC	ENSG00000121578.13	novel	2385	9	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	46	junction_2	96.2329232134413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-18	True	AATAAA	-41	NA	119240952	119211741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_138432.known	chr3	-	884	5	FSM	ENSG00000121578.13	ENST00000475803.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	79.1087068532914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTACCTGCTGGAACAT	-1	True	NA	NA	False	NA	NA	NA	119240878	119226885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_138438.known	chr3	-	2107	7	FSM	ENSG00000121578.13	ENST00000480814.5	2107	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	102.604418358405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATCAAATACCTCTGTA	3831	False	NA	-55	True	AATAAA	-4	NA	119237071	119211778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852
transcript_138439.known	chr3	+	9307	12	FSM	ENSG00000031081.11	ENST00000264245.9	9307	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	4.33322737738654	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATTGGAAAGCCACATG	-16	True	NA	NA	False	AGTAAA	-17	NA	119294382	119420714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119295005_119365315_119365419_119368371_119368517_119380903_119380987_119382291_119382400_119383083_119383227_119390784_119390984_119393466_119393592_119399198_119399262_119401821_119402398_119409495_119409777_119413855
transcript_138441.known	chr3	-	624	2	FSM	ENSG00000241155.1	ENST00000466292.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCACCCTGGAGGATG	370	False	NA	NA	False	NA	NA	NA	119322760	119314292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119314770_119322613
transcript_138448.known	chr3	-	4853	9	FSM	ENSG00000176142.13	ENST00000319172.10	4853	9	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_1	29.5209141965489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATGTCTTGGAAC	13	True	NA	NA	False	AATAAA	-29	NA	119463615	119428948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_138452.nic	chr3	-	2057	9	NIC	ENSG00000176142.13	novel	4853	9	NA	NA	0	-2232	intron_retention	FALSE	canonical	2	25	junction_8	49.8847108340822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTGGAATAACTCATT	-18	True	NA	-28	True	AGTAAA	-19	NA	119463646	119431731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462105_119463335
transcript_138461.nnic	chr3	-	1850	8	NIC	ENSG00000176142.13	novel	4853	9	NA	NA	-2	-2232	intron_retention	FALSE	canonical	2	14	junction_6	58.494723292458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTGGAATAACTCATT	10	True	NA	-28	True	AGTAAA	-19	NA	119463618	119431731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119461961_119462149_119463335
transcript_13847.nnic	chr1	-	2046	5	NNC	ENSG00000143570.19	novel	2038	4	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	921.519804453491	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTACAGTATCTGAT	4521	False	NA	-15	True	AATAAA	-13	NA	153963629	153959112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153960115_153960195_153960755_153962219_153962351_153962528_153962748_153963494
transcript_138472.known	chr3	+	1420	11	FSM	ENSG00000163389.12	ENST00000486607.5	1420	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.5724683716679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGATATCCTACGGTGA	-22	True	NA	NA	False	NA	NA	NA	119468962	119492477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119479907_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_138474.known	chr3	+	3508	11	FSM	ENSG00000163389.12	ENST00000295588.9	3508	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	14.7787008901324	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTGTCTTTATTTA	-22	True	NA	NA	False	AATGAA	-24	NA	119468962	119494708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_138477.known	chr3	+	2379	7	FSM	ENSG00000113845.10	ENST00000494664.6	2379	7	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	34.322004603461	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGTCAGAGGAAATTAG	-5	True	NA	NA	False	NA	NA	NA	119498546	119525090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_138479.known	chr3	+	1271	6	FSM	ENSG00000113845.10	ENST00000264244.7	1271	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	206.486222300666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	0	True	NA	14	True	AATAAA	-21	NA	119498551	119524066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119517204_119517316_119523605
transcript_138486.known	chr3	+	670	4	FSM	ENSG00000113845.10	ENST00000463927.6	670	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	249.952439920522	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAATTGAAAGTAGTT	-5	True	NA	NA	False	NA	NA	NA	119498582	119523638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119498943_119500694_119500861_119517204_119517316_119523605
transcript_138487.nic	chr3	+	1024	4	NIC	ENSG00000113845.10	novel	725	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	263.789478351372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	-2	True	NA	9	True	AATAAA	-16	NA	119498549	119524061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_119498928_119513640_119513720_119517204_119517316_119523605
transcript_138488.known	chr3	+	684	3	FSM	ENSG00000113845.10	ENST00000498399.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	272	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	166	False	NA	9	True	AATAAA	-16	NA	119498816	119524061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119498934_119517204_119517316_119523605
transcript_138489.known	chr3	+	3439	5	FSM	ENSG00000144843.12	ENST00000357003.8	3623	5	184	0	86	0	multi-exon	FALSE	canonical	3	14	junction_1	4.76969600708473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGCCATTCTTATCA	81	False	NA	9	True	AATAAA	-20	NA	119579675	119589945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119579852_119580550_119580637_119582133_119582468_119586284_119586646_119587463
transcript_138490.known	chr3	+	1501	4	FSM	ENSG00000144843.12	ENST00000478927.5	1501	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACCTTAAGCTCAGTTT	-5	True	NA	NA	False	NA	NA	NA	119579589	119588007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119579852_119582133_119582468_119586284_119586646_119587463
transcript_138491.known	chr3	+	1743	11	FSM	ENSG00000144837.9	ENST00000273371.9	1743	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.55668384875575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAATTGTTTTACTTG	1	True	NA	9	True	AATAAA	-20	NA	119597884	119629811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119597987_119606773_119606976_119608769_119608948_119609467_119609577_119613016_119613119_119616011_119616102_119618018_119618187_119619562_119619653_119625123_119625233_119628700_119628866_119629383
transcript_138493.known	chr3	+	1456	10	FSM	ENSG00000144837.9	ENST00000488919.5	1456	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	4.19288050313627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATCTCCTTGGGCAT	-9	True	NA	-86	True	NA	NA	NA	119597874	119629716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119597987_119608769_119608948_119609467_119609577_119613016_119613119_119616011_119616102_119618018_119618187_119619562_119619653_119625123_119625233_119628700_119628866_119629383
transcript_138496.known	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1109.2148374213	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	54	False	NA	-10	True	AGTAAA	-16	NA	119677346	119669531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
transcript_138498.known	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2419	junction_1	339	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-6	True	NA	-10	True	AGTAAA	-16	NA	119677406	119669531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119669666_119675144_119675234_119677203
transcript_138499.known	chr3	-	660	3	FSM	ENSG00000138495.7	ENST00000497116.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATGTCAAAAATGCAA	36	False	NA	NA	False	AATAAA	-42	NA	119677364	119674378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119674789_119675144_119675234_119677203
transcript_13850.known	chr1	-	1273	5	FSM	ENSG00000143543.15	ENST00000271843.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_2	15.9902313929474	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	-13	True	NA	-2	True	AATAAA	-21	NA	153977674	153974268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153976776_153976975_153977014_153977169
transcript_138500.known	chr3	+	939	6	FSM	ENSG00000183833.16	ENST00000463700.1	939	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.07245829914744	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	-26	True	NA	13	True	AATAAA	-22	NA	119703032	119715934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_138502.known	chr3	-	7000	12	FSM	ENSG00000082701.17	ENST00000316626.6	7000	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	44.7424216769797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGTGGTCCTCTTAT	2041	False	NA	NA	False	AATAAA	-17	NA	120093666	119821321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119866589_119866629_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_138504.known	chr3	-	7743	11	FSM	ENSG00000082701.17	ENST00000264235.13	7743	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	11.0765518100174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTGGTCCTCTTATT	-2	True	NA	NA	False	AATAAA	-18	NA	120094447	119821320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_138506.known	chr3	-	1731	10	FSM	ENSG00000082701.17	ENST00000650344.2	1731	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	39.7718803821972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTCAATTTTTT	1816	False	NA	-14	True	ATTAAA	-21	NA	120093891	119826677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119826856_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_138507.nic	chr3	-	3016	9	ISM	ENSG00000082701.17	ENST00000650344.2	1731	10	-709	35987	-29	0	5prime_fragment	FALSE	canonical	3	102	junction_7	12.3592070943083	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGTTGATATATTGAT	1107	False	NA	NA	False	CATAAA	-41	NA	120094600	119862664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_138508.known	chr3	-	1826	2	FSM	ENSG00000082701.17	ENST00000677530.1	1826	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	1816	False	NA	NA	False	NA	NA	NA	120093891	120000958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120002240_120093346
transcript_138510.known	chr3	+	982	2	FSM	ENSG00000242622.3	ENST00000469070.1	982	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTGCCCAAATGGG	14	True	NA	NA	False	NA	NA	NA	120095269	120099186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120095779_120098713
transcript_138511.known	chr3	-	1439	3	FSM	ENSG00000175697.11	ENST00000481907.1	1439	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCAGTTGCATTTTGG	320	False	NA	NA	False	NA	NA	NA	120285074	120242859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120243777_120244002_120244479_120285028
transcript_138512.known	chr3	-	7918	4	FSM	ENSG00000163428.4	ENST00000295628.4	7918	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	4.64279609239471	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTCTAGATGCAATGG	-25	True	NA	50	True	ATTAAA	-17	NA	120349354	120324508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120331409_120334861_120335140_120335824_120335954_120348743
transcript_138514.known	chr3	-	5682	11	FSM	ENSG00000163430.12	ENST00000295633.8	5682	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_5	153.621482872676	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTTGTCATTTTCTT	0	True	NA	NA	False	ATTAAA	-18	NA	120450992	120392292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_138518.known	chr3	+	651	3	FSM	ENSG00000065518.8	ENST00000184266.3	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	3456	junction_1	108	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCTACAATCAGTTGT	1	True	NA	NA	False	ATTAAA	-21	NA	120596335	120602507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120596540_120601110_120601258_120602207
transcript_138519.known	chr3	+	558	3	FSM	ENSG00000065518.8	ENST00000491335.1	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1824.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	22	False	NA	27	True	AATAAA	-19	NA	120596356	120602328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120596647_120601110_120601258_120602207
transcript_138520.known	chr3	-	1007	9	FSM	ENSG00000144840.10	ENST00000491398.5	1007	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	78.4624711247358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGGAAAAATGAAAGG	3	True	NA	NA	False	NA	NA	NA	120742533	120689693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738526_120738668_120742461
transcript_138521.known	chr3	-	3960	9	FSM	ENSG00000144840.10	ENST00000648525.1	3960	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	78.0311436222743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGCTTTTCTCAATAA	0	True	NA	NA	False	AATAAA	-2	NA	120742516	120686700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738549_120738668_120742461
transcript_138522.known	chr3	-	5605	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	10.4744587313276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTAGCTGTGTAAG	0	True	NA	NA	False	ATTAAA	-30	NA	120742516	120684937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_138529.known	chr3	-	760	7	FSM	ENSG00000144840.10	ENST00000483733.1	760	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	61.9076372958584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCCTTCAGCCTTACC	-4	True	NA	NA	False	NA	NA	NA	120742520	120689714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_138534.known	chr3	+	3000	5	FSM	ENSG00000153767.10	ENST00000283875.6	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	9.5524865872714	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	4	True	NA	22	True	AATAAA	-16	NA	120742743	120783069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120742795_120750522_120751001_120770727_120770930_120776422_120776665_120781042
transcript_138539.nnic	chr3	+	855	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-2	-128600	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	8.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGATTGGTTAATGT	-19	True	NA	NA	False	AATAAA	-23	NA	120908202	120916846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_13854.known	chr1	-	912	4	FSM	ENSG00000143570.19	ENST00000417348.2	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1062.0136010847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGCTGTGCCTGGCT	4888	False	NA	NA	False	GGGGCT	-33	NA	153963262	153960453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963001
transcript_138548.nic	chr3	-	1090	3	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-19	109432	-19	-3763	5prime_fragment	FALSE	canonical	3	41	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTATTGCATTAAGGAGA	-1	True	NA	NA	False	ATTAAA	-30	NA	121546007	121540862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121541480_121544726_121544907_121545714
transcript_138550.known	chr3	-	1992	14	FSM	ENSG00000180353.11	ENST00000314583.8	1992	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.44526087331672	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGGTAAATAGTACTT	5	True	NA	0	True	AATAAA	-23	NA	121660903	121631398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121637145_121637257_121642926_121642982_121644817_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
transcript_138555.nic	chr3	-	3288	13	ISM	ENSG00000173230.16	ENST00000393667.7	11198	22	-30	34173	-15	-349	5prime_fragment	FALSE	canonical	3	51	junction_7	13.549036456106	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTCAGAAAAATGTGT	184	False	NA	NA	False	GATAAA	-10	NA	121749770	121697375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_13856.known	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	1021.50781799369	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	4688	False	NA	-13	True	AATAAA	-15	NA	153963462	153959110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
transcript_138566.known	chr3	-	4959	12	FSM	ENSG00000173230.16	ENST00000494517.5	4959	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	24.7252672983571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGAAAGTTTGCTAAAT	288	False	NA	49	True	AAGAAA	-20	NA	121749666	121695477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_138569.known	chr3	-	11115	21	NIC	ENSG00000173230.16	novel	10295	22	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	61.7652612720128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTGTGTGTATGTGT	-5	True	NA	NA	False	AATAAA	-16	NA	121749767	121663202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730847_121730974_121749631
transcript_13857.known	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1031.86950079294	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4658	False	NA	-1	True	AATAAA	-27	NA	153963492	153959098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
transcript_138570.nic	chr3	-	591	5	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-104	31516	-15	2134	5prime_fragment	FALSE	canonical	3	78	junction_2	4.69041575982343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGCTCCAGGAGAAGGA	184	False	NA	NA	False	GATAAA	-2	NA	121749770	121726993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_138572.nic	chr3	-	1136	4	NIC	ENSG00000173230.16	novel	11186	22	NA	NA	0	-60	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	36.6272515424725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTGACTGGGTGTAGT	-13	True	NA	NA	False	NA	NA	NA	121749741	121729187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_121729341_121729864_121730018_121730875_121730974_121749009
transcript_138573.nic	chr3	-	543	4	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-104	33710	-15	-60	5prime_fragment	FALSE	canonical	3	78	junction_1	5.24933858267454	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTGACTGGGTGTAGT	184	False	NA	NA	False	NA	NA	NA	121749770	121729187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121729341_121729864_121730018_121730875_121730974_121749631
transcript_138574.known	chr3	-	280	3	FSM	ENSG00000173230.16	ENST00000472475.1	280	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATACTACACAAGAA	791	False	NA	NA	False	NA	NA	NA	121749163	121729989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121730018_121730875_121730974_121749009
transcript_138575.nic	chr3	-	390	3	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-104	34387	-15	125	5prime_fragment	FALSE	canonical	3	88	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTATTGTTTTTATCCTT	184	False	NA	NA	False	NA	NA	NA	121749770	121729864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121730018_121730875_121730974_121749631
transcript_138577.known	chr3	-	2577	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_14	24.9813195514291	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTTTCCCTTTTTGT	-28	True	NA	-3	True	ATTAAA	-18	NA	121835060	121769760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_138591.known	chr3	-	1919	12	FSM	ENSG00000173226.17	ENST00000349820.10	1919	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	78.9880208513704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-2	True	NA	0	True	AATAAA	-26	NA	121835034	121769993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_138595.known	chr3	+	998	6	FSM	ENSG00000145088.9	ENST00000273668.7	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	17.3366663462155	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTATGTATTTGTT	-13	True	NA	9	True	ATTAAA	-19	NA	121835208	121886526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_121835392_121844452_121844548_121854686_121854824_121857010_121857157_121872536_121872789_121886341
transcript_138597.known	chr3	+	829	5	FSM	ENSG00000145088.9	ENST00000490434.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	37.8310388437854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATATGTCTTAACTTT	-3	True	NA	-49	True	AATAAA	-16	NA	121835182	121886468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_121835392_121844452_121844548_121857010_121857157_121872536_121872789_121886341
transcript_138598.known	chr3	-	2855	8	FSM	ENSG00000145103.15	ENST00000344209.10	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.80640040940045	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-9	True	NA	-1	True	AATAAA	-15	NA	122022247	121987322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121988409_121993149_121993971_121994181_121994314_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_13860.known	chr1	-	2038	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_3	375.383655596363	5484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-6	True	NA	-12	True	AATAAA	-16	NA	153963537	153959109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
transcript_138600.known	chr3	-	2659	7	FSM	ENSG00000145103.15	ENST00000273691.7	2659	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_2	7.95124029458437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	55	False	NA	-1	True	AATAAA	-15	NA	122022183	121987322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121988409_121993149_121993971_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_138602.nic	chr3	-	2925	7	ISM	ENSG00000145103.15	ENST00000344209.10	2855	8	-47	4718	-47	-3635	5prime_fragment	FALSE	canonical	3	14	junction_1	4.85626742811116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGGCTACCCATGAAG	NA	False	NA	NA	False	AATAAA	-16	NA	122022294	121992040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121993971_121994181_121994314_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_138607.known	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	409.434594898868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	9	True	NA	55	True	NA	NA	NA	122383227	122359787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
transcript_138608.known	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	100.469833781091	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	5	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
transcript_138609.known	chr3	-	438	3	FSM	ENSG00000160124.9	ENST00000497726.5	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	368.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGTACATATTTATTT	5	True	NA	NA	False	ATTAAA	-13	NA	122383231	122359599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122359920_122362967_122363028_122383173
transcript_138610.known	chr3	+	801	6	FSM	ENSG00000114023.16	ENST00000232125.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	618.965911823906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATAAAGTATGATTT	-29	True	NA	-12	True	ATTAAA	-21	NA	122384175	122409917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122384300_122401375_122401536_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_138611.known	chr3	+	3052	5	FSM	ENSG00000114023.16	ENST00000477892.5	3052	5	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	28.8920404263873	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTACTTTTTATTTTTAA	-23	True	NA	34	True	AATAAA	-18	NA	122384181	122412334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122384300_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_138613.known	chr3	-	1923	15	FSM	ENSG00000114030.13	ENST00000494339.5	1923	15	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_10	102.913402272721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATACTCTGCTTTCACG	-21	True	NA	NA	False	NA	NA	NA	122514934	122426984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122457725_122457849_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_138616.known	chr3	-	6888	14	FSM	ENSG00000114030.13	ENST00000344337.11	6888	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_4	21.8512995023369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGAATTCCCTTATG	-26	True	NA	40	True	AGTAAA	-21	NA	122514939	122421901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_138621.nic	chr3	-	3006	14	NIC	ENSG00000114030.13	novel	6888	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_13	71.9474660417063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGCAATCTGTA	NA	False	NA	-25	True	AATAAA	-27	NA	122514953	122425679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_138636.known	chr3	-	3040	11	FSM	ENSG00000138496.17	ENST00000471785.5	3040	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	7.80768851837725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGAATGATTTTAGA	-2	True	NA	-81	True	TATAAA	-9	NA	122564242	122528004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564110
transcript_138637.known	chr3	-	3045	11	FSM	ENSG00000138496.17	ENST00000682323.1	3045	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_10	6.8818602136341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	-21	True	NA	0	True	AATAAA	-19	NA	122564300	122527923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564244
transcript_138638.known	chr3	-	3128	11	FSM	ENSG00000138496.17	ENST00000477522.6	3128	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	7.3348483283569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	204	False	NA	0	True	AATAAA	-19	NA	122564577	122527923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564438
transcript_138642.known	chr3	+	7694	17	FSM	ENSG00000173193.15	ENST00000474629.7	7694	17	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_6	10.0553157583439	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGGTAAACATTTTTA	10	True	NA	17	True	AATAAA	-18	NA	122680838	122730840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122681071_122685184_122685319_122687079_122687114_122692300_122692544_122695425_122695663_122699389_122701636_122703741_122703979_122704526_122704749_122708189_122708269_122713423_122713574_122713871_122713935_122714261_122714430_122718070_122718278_122718358_122718959_122720254_122720389_122727811_122727987_122728307
transcript_138645.known	chr3	-	1964	8	FSM	ENSG00000169087.11	ENST00000306103.3	1964	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	7.70369643583586	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCCATTCATTTACAT	-24	True	NA	-18	True	AATAAA	-17	NA	122793831	122739998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_13865.known	chr1	-	1216	4	FSM	ENSG00000143543.15	ENST00000368589.5	1216	4	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_2	16.2138486760204	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTTCTGTAACTT	1	True	NA	-15	True	AATAAA	-15	NA	153977660	153974511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169
transcript_138652.known	chr3	-	838	6	FSM	ENSG00000169087.11	ENST00000467643.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.8243811822858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCGTTTTCCTCAGT	380	False	NA	NA	False	AGTAAA	-21	NA	122793759	122755323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122755432_122758771_122758854_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_138654.known	chr3	+	3322	9	FSM	ENSG00000138463.9	ENST00000261038.6	3322	9	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_4	15.6719295238334	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAATTCTCTTTTTTTT	-24	True	NA	NA	False	AATAAA	-17	NA	122795068	122881139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122795536_122806856_122806951_122826799_122827066_122833316_122833447_122845762_122845872_122856306_122856375_122860074_122860203_122872414_122872598_122879262
transcript_138662.known	chr3	-	4855	23	FSM	ENSG00000082684.16	ENST00000357599.8	4855	23	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_22	16.2142805132384	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCTTTAATAGATGATA	-16	True	NA	NA	False	NA	NA	NA	123027763	122909081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913533_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_122961139_122961302_123027463
transcript_138672.known	chr3	-	4805	22	FSM	ENSG00000082684.16	ENST00000648990.1	4805	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	29.1433239925259	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCTTTAATAGATGATA	NA	False	NA	NA	False	NA	NA	NA	123027878	122909081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913536_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_123027463
transcript_13868.known	chr1	-	2022	3	FSM	ENSG00000143570.19	ENST00000537590.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	705	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4509	False	NA	-1	True	AATAAA	-27	NA	153963641	153959098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962528_153962748_153963494
transcript_138694.known	chr3	-	3309	8	FSM	ENSG00000082684.16	ENST00000649167.1	3309	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	20.8923382108937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGGCGTTTGGTATG	-8	True	NA	NA	False	ACTAAA	-13	NA	123027711	122924342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_123027463
transcript_138707.nic	chr3	-	4544	5	ISM	ENSG00000082684.16	ENST00000357599.8	4855	23	6	26605	6	7750	5prime_fragment	FALSE	canonical	3	80	junction_4	13.0647426304539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAGAAAAA	-10	True	NA	NA	False	NA	NA	NA	123027757	122935686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_122939471_122943435_122943536_122948505_122948710_122961139_122961302_123027463
transcript_138714.known	chr3	+	1844	17	FSM	ENSG00000065485.20	ENST00000316218.12	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_12	35.5518437461406	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-1	True	NA	13	True	AATAAA	-14	NA	123067024	123162104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_138719.nic	chr3	+	2298	16	ISM	ENSG00000065485.20	ENST00000316218.12	1844	17	-31	1	-31	0	intron_retention	FALSE	canonical	3	299	junction_12	36.654785953997	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTGGTATGGTTTATT	NA	False	NA	12	True	AATAAA	-13	NA	123066993	123162103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320
transcript_138721.known	chr3	+	1651	16	FSM	ENSG00000065485.20	ENST00000489923.5	1651	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	129.08006128842	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-40	True	NA	13	True	AATAAA	-14	NA	123067061	123162104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123145521_123145593_123146117_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_138732.known	chr3	+	3401	7	FSM	ENSG00000121542.12	ENST00000492595.6	3401	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	22.1484887871736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTCATTATTTGG	-1	True	NA	8	True	TATAAA	-18	NA	123201942	123274136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_138737.known	chr3	+	673	4	FSM	ENSG00000121542.12	ENST00000481965.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.1626073082087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAGACTATCATTCAGA	25	False	NA	NA	False	NA	NA	NA	123201968	123271909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123201987_123209198_123209400_123259523_123259590_123271521
transcript_13874.known	chr1	+	1418	1	FSM	ENSG00000272654.1	ENST00000608236.1	1418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAAGACGTTAGTCTCT	1	True	NA	NA	False	ATTAAA	-17	NA	153977742	153979160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153977700_153979200
transcript_138744.nic	chr3	-	2563	12	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	96300	-634	-1890	0	3prime_fragment	FALSE	canonical	3	24	junction_10	23.2702413445027	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123320042	123283943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123318019_123318118_123319673
transcript_138748.nnic	chr3	-	2554	11	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3155	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	21.2602916254693	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123314997	123283943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123314539
transcript_13875.known	chr1	-	2723	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	0	0	0	multi-exon	FALSE	canonical	3	2202	junction_1	53	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	4675	False	NA	-12	True	AATAAA	-16	NA	153963475	153959109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528
transcript_138750.nic	chr3	-	3996	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101768	-2282	3578	0	3prime_fragment	FALSE	canonical	3	58	junction_8	13.9133118599987	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	-9	True	NA	0	True	ATTAAA	-16	NA	123314574	123282295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_138754.nic	chr3	-	2731	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101385	-634	3195	0	3prime_fragment	FALSE	canonical	3	58	junction_8	13.9133118599987	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123314957	123283943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_138755.nnic	chr3	-	2303	10	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3289	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_9	26.4868940337586	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123314863	123283943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234_123314323_123314539
transcript_138758.nnic	chr3	-	3868	9	NIC	ENSG00000173175.15	novel	6643	21	NA	NA	3589	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	21.8771427521969	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	2	True	NA	0	True	ATTAAA	-16	NA	123314563	123282295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_138759.nnic	chr3	-	2220	9	NIC	ENSG00000173175.15	novel	3962	23	NA	NA	3589	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	21.8771427521969	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	2	True	NA	-29	True	AATAAA	-8	NA	123314563	123283943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_13876.known	chr1	-	1353	8	FSM	ENSG00000143545.10	ENST00000614713.4	1353	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	287.996456894305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTCTCCACTCAAATC	6727	False	NA	0	True	NA	NA	NA	153985366	153981616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153984983
transcript_138768.known	chr3	-	4125	7	FSM	ENSG00000206527.10	ENST00000383657.10	4125	7	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	28.4355997533608	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCAGTGAGTGCAGT	-11	True	NA	-9	True	AATAAA	-29	NA	123585053	123491553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
transcript_13877.known	chr1	+	467	5	FSM	ENSG00000177954.14	ENST00000643794.1	467	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13337.6215552099	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTATTGTCTTGTTT	0	True	NA	16	True	AATAAA	-16	NA	153990762	153992150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153990803_153990913_153991035_153991114_153991224_153991565_153991677_153992064
transcript_138771.known	chr3	-	10113	34	FSM	ENSG00000065534.20	ENST00000360304.8	10113	34	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_32	8.03539004112107	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTTGTTCTTAATTCT	-9	True	NA	NA	False	AATATA	-15	NA	123884332	123610048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123614350_123618638_123618771_123620206_123620337_123626817_123626942_123629473_123629627_123638070_123638195_123640286_123640505_123647223_123647428_123648970_123649065_123649161_123649195_123657125_123657429_123664104_123664259_123666218_123666347_123667136_123667188_123682223_123682311_123692734_123692852_123700019_123701006_123701437_123701510_123707753_123708004_123708697_123708896_123709755_123709894_123722127_123722281_123725943_123726079_123732895_123733103_123733686_123734223_123735397_123735417_123737377_123737544_123738896_123739063_123739952_123740002_123752330_123752539_123793676_123793845_123831547_123831671_123876558_123876618_123884205
transcript_138777.known	chr3	+	760	3	FSM	ENSG00000239523.7	ENST00000470449.2	779	3	10	9	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	10	True	NA	NA	False	AATAAA	-31	NA	123585555	123630821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123585802_123629493_123629682_123630495
transcript_138779.known	chr3	+	2978	2	FSM	ENSG00000239523.7	ENST00000665710.1	2978	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGGTGCGCGCCTG	-15	True	NA	NA	False	AATACA	-12	NA	123585530	123588596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123585554_123585641
transcript_13878.known	chr1	+	352	4	FSM	ENSG00000177954.14	ENST00000651669.1	352	4	0	0	0	0	multi-exon	FALSE	canonical	3	21616	junction_3	3984.7334498893	3169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTGTTTAAGTG	-1	True	NA	21	True	AATAAA	-21	NA	153990761	153992155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153990803_153991114_153991224_153991565_153991677_153992064
transcript_138781.known	chr3	-	4131	13	FSM	ENSG00000175455.16	ENST00000409697.8	4131	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_9	49.2456991917963	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTGTCTACTCC	3	True	NA	NA	False	AATAAA	-23	NA	123961229	123913421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_138783.known	chr3	-	3260	12	FSM	ENSG00000175455.16	ENST00000433542.7	3260	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	62.4170192937845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTGTTGTTGGTGAAA	1	True	NA	-4	True	ATTAAA	-17	NA	123961378	123914318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_138789.nic	chr3	-	546	5	ISM	ENSG00000175455.16	ENST00000409697.8	4131	13	-183	42466	-4	189	5prime_fragment	FALSE	canonical	3	87	junction_1	47.8193214088197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATGAAAAACATACTATT	-4	True	NA	57	True	AAAAAG	-5	NA	123961412	123955887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_13879.known	chr1	+	573	4	FSM	ENSG00000177954.14	ENST00000493224.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	12713.0359342946	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCCTGTTTATTGTCT	0	True	NA	11	True	AATAAA	-11	NA	153990762	153992145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153991035_153991114_153991224_153991565_153991677_153992064
transcript_138790.known	chr3	-	374	2	FSM	ENSG00000175455.16	ENST00000463996.1	374	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCCAGTAAATTCTCAA	24	True	NA	NA	False	AATAAA	-18	NA	123961208	123897304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123897614_123961143
transcript_138795.known	chr3	+	2242	7	FSM	ENSG00000114491.14	ENST00000467167.5	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	206.623987528608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	-3	True	NA	NA	False	NA	NA	NA	124730444	124744757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_124730628_124731505_124731605_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_138797.known	chr3	+	6652	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_4	26.9547769421303	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	4	True	NA	30	True	AATAGA	-18	NA	124730451	124749273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_138798.known	chr3	+	2001	5	FSM	ENSG00000114491.14	ENST00000462091.5	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	182.790864104309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	-15	True	NA	NA	False	NA	NA	NA	124730432	124744757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_124730628_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_1388.known	chr1	+	1248	8	FSM	ENSG00000189409.14	ENST00000356026.10	1248	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	20.6595335506543	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	-9	True	NA	NA	False	GATAAA	-16	NA	1632172	1634654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1632375_1632782_1632914_1632980_1633121_1633187_1633356_1633747_1633913_1633988_1634100_1634201_1634329_1634450
transcript_138804.nnic	chr3	-	3182	15	NNC	ENSG00000082781.12	novel	4440	15	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	370.215884343727	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGTGTGTTTCTTTCT	6	True	NA	-3	True	ATTAAA	-28	NA	124887666	124762947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124887489
transcript_138805.nic	chr3	-	3075	15	NIC	ENSG00000082781.12	novel	4440	15	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	362.482434479414	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGTGTGTTTCTTTCT	3	True	NA	-3	True	ATTAAA	-28	NA	124887669	124762947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124887599
transcript_13881.known	chr1	+	496	3	FSM	ENSG00000177954.14	ENST00000477151.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	21616	junction_2	4418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTGTTTATTGTCTT	130	False	NA	12	True	AATAAA	-12	NA	153990920	153992146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153991224_153991565_153991677_153992064
transcript_138810.nic	chr3	-	2985	15	NIC	ENSG00000082781.12	novel	4440	15	NA	NA	31	-217	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	362.482434479414	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTGAGTCCTGAGACT	NA	False	NA	-8	True	AATAAA	-21	NA	124887796	124763164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124887599
transcript_138821.known	chr3	-	3485	14	FSM	ENSG00000221955.11	ENST00000469902.6	3485	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	20.8417537223923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTAATGGTGACTCATA	0	True	NA	-8	True	ATTAAA	-14	NA	125212748	125082643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125211298_125211395_125212699
transcript_138833.nnic	chr3	-	2901	13	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	-21	-10	combination_of_known_splicesites	FALSE	canonical	2	7	junction_12	24.6221445044903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATAGAGTGAAAAGTC	NA	False	NA	-13	True	AATAAA	-31	NA	125212769	125083152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125212699
transcript_138854.nic	chr3	-	2842	11	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	-158	-10	combination_of_known_junctions	FALSE	canonical	1	6	junction_6	29.8899648711737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATAGAGTGAAAAGTC	NA	False	NA	-13	True	AATAAA	-31	NA	125213022	125083152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125135668_125135783_125187236_125187429_125190374_125190522_125211298_125211395_125212699
transcript_138861.nic	chr3	-	2288	9	NIC	ENSG00000221955.11	novel	1753	9	NA	NA	-86	-10	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	25.7630428133014	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATAGAGTGAAAAGTC	2590	False	NA	-13	True	AATAAA	-31	NA	125121026	125083152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125120884
transcript_138863.known	chr3	-	2831	8	FSM	ENSG00000221955.11	ENST00000430155.6	2831	8	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_7	7.79586494265272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGACTCATATTCTCAAA	-20	True	NA	0	True	ATTAAA	-22	NA	125120854	125082635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598
transcript_13887.known	chr1	-	1219	9	FSM	ENSG00000143549.21	ENST00000271850.11	1219	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	2242.93288742664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACATTCCAAATAATT	2642	False	NA	NA	False	NA	NA	NA	154192058	154157317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_138881.nic	chr3	-	2160	5	ISM	ENSG00000221955.11	ENST00000465475.5	1949	6	2632	0	-27	0	3prime_fragment	FALSE	canonical	3	13	junction_1	27.5952894530933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAGTCTCCCTCCAAT	2649	False	NA	-3	True	AATAAA	-41	NA	125120967	125083142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_125084053_125107480_125108127_125110188_125110336_125118768_125118857_125120598
transcript_138884.known	chr3	-	2960	10	FSM	ENSG00000163848.20	ENST00000485866.5	2960	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	32.4417807125699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAATAATACTGGCACT	6	True	NA	NA	False	NA	NA	NA	125375313	125232327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125314936_125315054_125323308_125323445_125331157_125331239_125375101
transcript_138888.known	chr3	-	9514	9	FSM	ENSG00000163848.20	ENST00000360647.9	9514	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	11.4318633651737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTGTCATTGAGT	-6	True	NA	-2	True	AATAAA	-19	NA	125375325	125225668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
transcript_138891.known	chr3	-	2952	9	FSM	ENSG00000163848.20	ENST00000484491.5	2952	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	24.8596057893121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAC	70	False	NA	2	True	NA	NA	NA	125375249	125232075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323387_125323445_125331157_125331239_125375101
transcript_138896.known	chr3	-	2949	8	FSM	ENSG00000163848.20	ENST00000492394.5	2949	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	26.7444443973407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTAAAAAGGAAAAAAAAAA	68	False	NA	-1	True	NA	NA	NA	125375251	125232078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125375101
transcript_138902.known	chr3	-	2512	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_10	17.9631443854637	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-14	True	NA	-10	True	AATAAA	-21	NA	125520202	125446649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_138905.known	chr3	-	1308	13	FSM	ENSG00000114520.11	ENST00000471751.5	1308	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	74.6368988280372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCACTACCTAGTATAC	7	True	NA	-67	True	AATAAA	-8	NA	125520181	125447710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125520031
transcript_138911.known	chr3	-	4598	13	FSM	ENSG00000144909.8	ENST00000296220.6	4598	13	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_6	14.5945195193264	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTCTGTCTCTTTTA	35	True	NA	NA	False	AATAAA	-17	NA	125595497	125528857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125530581_125531860_125532015_125538450_125538634_125547405_125547593_125552180_125552680_125560378_125560520_125563697_125563844_125567393_125567596_125576188_125576366_125578959_125579040_125579864_125580041_125582909_125582979_125594636
transcript_138913.nnic	chr3	+	675	2	NNC	ENSG00000284624.1	novel	1151	2	NA	NA	-76	-68004	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTCTGAATTTTATTT	NA	False	NA	-22	True	AATAAA	-14	NA	125766439	125773286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_125766819_125772990
transcript_138914.known	chr3	+	1151	2	FSM	ENSG00000284624.1	ENST00000641586.1	1151	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGCAGTTCCCAGC	NA	False	NA	NA	False	AATAGA	-15	NA	125766647	125841290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_125766819_125840310
transcript_138916.known	chr3	+	988	8	FSM	ENSG00000171084.16	ENST00000484500.5	988	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.36234212955721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCACACACGACTCCAAT	NA	False	NA	NA	False	NA	NA	NA	125916623	125928595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125922463_125922566_125923663_125923797_125923878_125924141_125924965_125925116_125928494
transcript_138924.known	chr3	-	805	6	FSM	ENSG00000189366.11	ENST00000340333.7	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.61109401705356	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	25	False	NA	-3	True	AATGAA	-18	NA	125937039	125929274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125929568_125930556_125930630_125931637_125931753_125932649_125932710_125933574_125933697_125936897
transcript_138926.known	chr3	+	1910	5	FSM	ENSG00000171084.16	ENST00000467239.5	1910	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.54835134966506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	125916619	125930010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_138927.known	chr3	+	2012	5	FSM	ENSG00000171084.16	ENST00000485843.2	2027	5	15	0	5	0	multi-exon	FALSE	canonical	3	7	junction_1	5.22015325445528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	NA	False	NA	NA	False	AATAAA	-31	NA	125916629	125930024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_125916818_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_138931.known	chr3	-	1797	12	FSM	ENSG00000114544.17	ENST00000315891.10	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	21.7057710267977	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTACTTGACCCT	-8	True	NA	-45	True	AATAAA	-5	NA	126084304	126006372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_138932.known	chr3	-	1705	11	FSM	ENSG00000114544.17	ENST00000346785.9	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	29.0489242485845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-8	True	NA	-29	True	AATAAA	-21	NA	126084304	126006356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
transcript_138934.known	chr3	-	2182	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	13.8982013224734	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	7	True	NA	-29	True	AATAAA	-21	NA	126084124	126006356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_138937.known	chr3	-	3064	23	FSM	ENSG00000144908.14	ENST00000393434.7	3064	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.29913587484074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCACATCTCTGCGTTT	-4	True	NA	NA	False	AATAAA	-16	NA	126180586	126103569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126103847_126105725_126105926_126107140_126107247_126109943_126110110_126112781_126112881_126114556_126114657_126118004_126118099_126124363_126124452_126125615_126125722_126130222_126130294_126131383_126131535_126135534_126135663_126136763_126136884_126137812_126137961_126146834_126146927_126150405_126150532_126153443_126153582_126154553_126154644_126155401_126155504_126157342_126157509_126158404_126158640_126160852_126161003_126180475
transcript_138938.known	chr3	-	3137	22	FSM	ENSG00000144908.14	ENST00000455064.6	3137	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.3285680223431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCGTTTCTCTGCTC	743	False	NA	NA	False	AATAAA	-24	NA	126180802	126103561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126103847_126105725_126105926_126107140_126107247_126109943_126110110_126112781_126112881_126114556_126114657_126118004_126118099_126124363_126124452_126125615_126125722_126130222_126130294_126135534_126135663_126136763_126136884_126137812_126137961_126146834_126146927_126150405_126150532_126153443_126153582_126154553_126154644_126155401_126155504_126157342_126157509_126158404_126158640_126160852_126161003_126180475
transcript_138945.known	chr3	-	2540	3	FSM	ENSG00000163884.4	ENST00000296233.4	2540	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	4.5	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGCATTCATGTGCT	-2	True	NA	-9	True	AATAAA	-18	NA	126357408	126342634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126343896_126351840_126352948_126357236
transcript_138947.known	chr3	-	3377	10	FSM	ENSG00000070476.15	ENST00000389709.8	3377	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	24.5165602888142	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCGTGTATGTTTTATT	18	True	NA	-1	True	TATAAA	-41	NA	126475891	126437600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126438462_126439631_126439728_126441764_126441947_126459652_126459738_126461534_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
transcript_138950.nnic	chr3	+	2101	4	NNC	ENSG00000180767.11	novel	1917	3	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	22.86676384819	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGAGTTTATCTGCT	NA	False	NA	39	True	AATAAA	-21	NA	126524071	126543291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_126524430_126536270_126536354_126541165_126541267_126541732
transcript_138952.known	chr3	+	1917	3	FSM	ENSG00000180767.11	ENST00000319340.7	1917	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	8.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGAGTTTATCTGCT	5	True	NA	39	True	AATAAA	-21	NA	126524154	126543291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_126524430_126536270_126536354_126541732
transcript_138955.known	chr3	-	2921	16	FSM	ENSG00000197763.20	ENST00000524230.9	2921	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	9.77388811522256	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGGTTGCATGGGA	-7	True	NA	NA	False	CATAAA	-14	NA	126655124	126607049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126615354_126615463_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
transcript_138957.known	chr3	-	2351	15	FSM	ENSG00000197763.20	ENST00000523403.3	2351	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.6034065346613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTTTTCTAGTGCGT	16	True	NA	41	True	TATAAA	-1	NA	126655101	126607488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
transcript_138966.known	chr3	+	1000	8	FSM	ENSG00000159685.11	ENST00000290913.8	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	28.8825913247522	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCCTACTCTGC	-2	True	NA	36	True	AATAAA	-42	NA	126704239	126960420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957415_126957552_126960195
transcript_138967.known	chr3	+	1159	7	FSM	ENSG00000159685.11	ENST00000508789.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	147.982825580088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGCAAGGATAGGCCATC	-1	True	NA	NA	False	NA	NA	NA	126704240	126957933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852643_126852731_126914679_126914751_126957415
transcript_138985.nnic	chr3	-	2473	12	NNC	ENSG00000163870.16	novel	1903	12	NA	NA	-19	0	intron_retention	FALSE	canonical	2	11	junction_11	84.0436722363749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	7115	False	NA	-19	True	AATAAA	-18	NA	127591114	127573068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127587983_127588161_127590409
transcript_138988.nnic	chr3	-	1954	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	77.9316292847468	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	NA	False	NA	-19	True	AATAAA	-18	NA	127598283	127573068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
transcript_138996.known	chr3	-	3752	11	FSM	ENSG00000163870.16	ENST00000355552.8	3752	11	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_10	27.8251684631019	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTAAGTATGCATGCA	-9	True	NA	NA	False	AATAAA	-43	NA	127590733	127571231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
transcript_138997.nic	chr3	-	1820	11	NIC	ENSG00000163870.16	novel	1903	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	67.0340212131124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	7118	False	NA	-19	True	AATAAA	-18	NA	127591111	127573068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590882
transcript_139.known	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	6178	junction_10	2111.7668010986	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_139010.known	chr3	-	1831	10	FSM	ENSG00000163870.16	ENST00000393400.6	1831	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	70.5923788423176	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAAAGGAAAAGGAGC	-10	True	NA	14	True	NA	NA	NA	127590734	127573092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
transcript_13902.known	chr1	-	1248	7	FSM	ENSG00000143549.21	ENST00000509409.5	1248	7	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_6	1897.49929732091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGTGATTCCAGGA	-11	True	NA	NA	False	NA	NA	NA	154183227	154157111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154182987
transcript_139044.known	chr3	+	3434	16	FSM	ENSG00000073111.14	ENST00000265056.12	3434	16	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	98.2865651495101	994	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTATCTGTTGGCTTC	-12	True	NA	16	True	AATAAA	-18	NA	127598410	127622436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127598473_127599317_127599548_127604607_127604784_127604895_127605157_127606117_127606338_127606609_127606818_127608381_127608517_127608831_127609024_127615861_127615956_127616867_127617119_127617278_127617406_127617968_127618082_127619026_127619279_127620697_127620881_127621072_127621229_127621662
transcript_13908.known	chr1	-	3148	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	4813	junction_2	331.56118036726	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-6	True	NA	-5	True	ATTAAA	-31	NA	154183189	154155307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_139084.known	chr3	+	2175	8	FSM	ENSG00000114631.11	ENST00000342480.7	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_4	28.2120252259021	2493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCCTTCTTGACTCAT	-7	True	NA	16	True	ATTAAA	-30	NA	127629184	127672802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127629290_127639244_127639524_127660377_127661160_127662236_127662312_127668440_127668598_127669140_127669203_127671433_127671614_127672267
transcript_13909.known	chr1	-	2108	8	FSM	ENSG00000143549.21	ENST00000330188.13	2108	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2415.42781945982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGACCTATTTGACTT	11	True	NA	-11	True	AATAAA	-17	NA	154183205	154156363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154171412_154171489_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_139092.nic	chr3	+	2865	7	ISM	ENSG00000114631.11	ENST00000342480.7	2175	8	-36	0	-36	0	intron_retention	FALSE	canonical	3	312	junction_4	29.8663690461362	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCCTTCTTGACTCAT	-3	True	NA	16	True	ATTAAA	-30	NA	127629148	127672802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_127629290_127639244_127639524_127660377_127661160_127662236_127662312_127668440_127668598_127669140_127669203_127671433
transcript_13910.known	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1822.92445016803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	8970	False	NA	0	True	AATAAA	-17	NA	154183130	154158608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_139106.known	chr3	+	1915	12	FSM	ENSG00000114626.18	ENST00000475042.5	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	7.54490688045325	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	-15	True	NA	10	True	AATAAA	-20	NA	127672957	127680920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_139109.known	chr3	+	1962	12	FSM	ENSG00000114626.18	ENST00000232744.13	1962	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	4.05336305629235	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCTGGGGTACAG	-21	True	NA	16	True	AATAAA	-26	NA	127672951	127680926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127673082_127674390_127674454_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_139113.known	chr3	+	1961	12	FSM	ENSG00000114626.18	ENST00000453791.6	1961	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.3396852422639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	-15	True	NA	10	True	AATAAA	-20	NA	127672957	127680920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127673082_127674344_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_139127.known	chr3	-	4941	8	FSM	ENSG00000074416.16	ENST00000265052.10	4271	8	-670	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88441513689613	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTGTCTGTCCATCA	7	True	NA	2	True	AATAAA	-17	NA	127823185	127689065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_139138.known	chr3	+	2205	7	FSM	ENSG00000132394.11	ENST00000254730.11	2205	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	22.3532249723986	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	19	True	NA	16	True	AATAAA	-26	NA	128153480	128408646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128264616_128264782_128341232_128341890_128358216_128358374_128408068
transcript_139147.nic	chr3	+	2085	6	NIC	ENSG00000132394.11	novel	2205	7	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	56.7006172805905	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	-26	True	NA	16	True	AATAAA	-26	NA	128153435	128408646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128358216_128358374_128408068
transcript_13915.nic	chr1	+	3968	28	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	28	-2	combination_of_known_junctions	FALSE	canonical	3	271	junction_27	310.951109650042	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCTAT	-25	True	NA	5	True	TATAAA	-12	NA	154220912	154270845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
transcript_139150.known	chr3	+	1859	5	FSM	ENSG00000132394.11	ENST00000483457.1	1859	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	82.2936814099357	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTGGTGTCTCTCTCTC	39	True	NA	12	True	AATAAA	-22	NA	128153500	128408642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128408068
transcript_139158.known	chr3	+	3568	12	FSM	ENSG00000058262.10	ENST00000243253.8	3568	12	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_7	63.4662661746282	1067	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCATGTTCTCTTGAT	5	True	NA	25	True	AATAAA	-20	NA	128052436	128071683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128052560_128052834_128052903_128055515_128055582_128055672_128055752_128056708_128056841_128060101_128060212_128060507_128060662_128064876_128065038_128066953_128067152_128067420_128067613_128067982_128068060_128069475
transcript_139174.known	chr3	-	1899	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_6	76.4827431516417	1106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTACCTAATGTC	-9	True	NA	NA	False	NA	NA	NA	128123812	128080809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
transcript_139204.known	chr3	-	2284	10	FSM	ENSG00000163902.12	ENST00000296255.8	2284	10	0	0	0	0	multi-exon	FALSE	canonical	3	1550	junction_5	104.562699012082	1112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGTCTGTTGAAGAT	-1	True	NA	-27	True	AATAAA	-20	NA	128650818	128619968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_128620594_128622163_128622410_128625533_128625654_128625873_128626013_128626732_128626833_128629950_128630144_128631947_128632158_128637798_128638106_128644918_128644984_128650539
transcript_139217.known	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1172	junction_5	126.604897219657	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	6	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_139222.known	chr3	+	3182	5	FSM	ENSG00000075785.14	ENST00000675712.1	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	1172	junction_4	124.035277239985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	-1	True	NA	11	True	AATAAA	-18	NA	128726135	128814796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128807672_128813326
transcript_139223.known	chr3	+	2122	5	FSM	ENSG00000075785.14	ENST00000674748.1	2122	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	572.356259247682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	6	True	NA	11	True	AATAAA	-18	NA	128726182	128814796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_139225.known	chr3	+	552	3	FSM	ENSG00000075785.14	ENST00000491681.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_2	28	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACATCTTTGTCTCACC	130	False	NA	NA	False	NA	NA	NA	128726351	128798425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942
transcript_139226.known	chr3	+	1217	6	FSM	ENSG00000075785.14	ENST00000490093.6	1217	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	562.841931629121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACAGTTAATCTGTGT	-20	True	NA	-9	True	NA	NA	NA	128726156	128813791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806616_128807554_128807672_128813326
transcript_139227.known	chr3	+	2475	19	FSM	ENSG00000177646.20	ENST00000680744.1	2475	19	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	73.7393850908743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	24	True	NA	17	True	TATAAA	-12	NA	128879653	128913102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128898430_128898507_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_139232.known	chr3	+	2538	18	FSM	ENSG00000177646.20	ENST00000680636.1	2538	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	59.2928337862874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGCCTTTGCTGTAC	-16	True	NA	22	True	TATAAA	-17	NA	128879613	128913107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128909926_128910150_128910740_128910814_128912506
transcript_139233.known	chr3	+	2445	18	FSM	ENSG00000177646.20	ENST00000308982.12	2445	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_13	22.4328293781688	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCTGTACTTGTCAC	-10	True	NA	29	True	TATAAA	-24	NA	128879619	128913114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_139236.known	chr3	+	2431	18	FSM	ENSG00000177646.20	ENST00000511227.5	2431	18	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	53.490807023134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGAGGTGGGTGGGGA	-7	True	NA	-69	True	GGGGCT	-17	NA	128879622	128912927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128880018_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_139243.known	chr3	+	3036	17	FSM	ENSG00000177646.20	ENST00000511325.2	3036	17	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_13	22.4136363348297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTACTGTTAGCCTTT	-16	True	NA	15	True	TATAAA	-10	NA	128879613	128913100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128910150_128910740_128910814_128912506
transcript_139244.known	chr3	+	3144	17	FSM	ENSG00000177646.20	ENST00000681319.1	3144	17	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	21.5970737311794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTACTGTTAGCCTT	-16	True	NA	14	True	TATAAA	-9	NA	128879613	128913099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_139249.known	chr3	+	2401	17	FSM	ENSG00000177646.20	ENST00000505867.5	2401	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	60.2642293881702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGGTCATTCATTTAA	16	True	NA	18	True	AAGAAA	-15	NA	128879645	128913014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128880018_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_139257.known	chr3	+	1703	12	FSM	ENSG00000177646.20	ENST00000681552.1	1703	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_11	70.5408855127693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGAAACAGCTTGAAAG	-7	True	NA	-5	True	NA	NA	NA	128879622	128912991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128912506
transcript_139258.known	chr3	+	2568	18	FSM	ENSG00000177646.20	ENST00000679431.1	2568	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	76.2419659389907	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	13	True	NA	17	True	TATAAA	-12	NA	128879642	128913102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128880018_128884674_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902633_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_139260.known	chr3	-	1704	12	FSM	ENSG00000240682.10	ENST00000273541.12	1704	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	85.9920234624907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACGCAACCCACAAGT	15	True	NA	NA	False	NA	NA	NA	129161048	129129373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129137130_129137197_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_139262.known	chr3	-	988	11	FSM	ENSG00000240682.10	ENST00000393292.7	988	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	68.0415314348523	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACACAGGCTGGTGCTGC	26	True	NA	NA	False	NA	NA	NA	129161037	129130016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134827_129134955_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_139269.known	chr3	-	4230	4	FSM	ENSG00000172780.17	ENST00000393304.5	4230	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	87.3473271231327	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCCCAGGACTGGTTCT	-18	True	NA	NA	False	ATTAAA	-21	NA	129121804	129087568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129091347_129094985_129095170_129121285_129121493_129121743
transcript_139270.known	chr3	-	4215	4	FSM	ENSG00000172780.17	ENST00000393305.5	4215	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	93.9373313556555	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCCCAGGACTGGTTCT	0	True	NA	NA	False	ATTAAA	-21	NA	129122150	129087568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129091347_129094985_129095170_129121285_129121493_129122104
transcript_139274.known	chr3	-	4478	3	FSM	ENSG00000172780.17	ENST00000315150.10	4478	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	6	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCGCCCAGGACTGGT	-18	True	NA	NA	False	ATTAAA	-18	NA	129121804	129087571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129091347_129094985_129095170_129121285
transcript_139275.known	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_3	2600.62482876712	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-1	True	NA	-37	True	AATAAA	-27	NA	129183922	129169568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
transcript_139276.known	chr3	-	1040	5	FSM	ENSG00000169714.17	ENST00000441626.6	1040	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2735.24828626214	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTATGAACTTCCATA	11	False	NA	NA	False	NA	NA	NA	129183910	129170101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171633_129171772_129183775
transcript_139277.known	chr3	-	1623	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2777.87054233994	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGACAGTTTGGACTT	-5	True	NA	-18	True	ATTAAA	-21	NA	129183899	129169486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
transcript_139279.known	chr3	-	1516	5	FSM	ENSG00000169714.17	ENST00000500450.6	1516	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2686.89861876104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	11	False	NA	-37	True	AATAAA	-27	NA	129183910	129169568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171654_129171772_129183775
transcript_139287.known	chr3	-	1026	4	FSM	ENSG00000169714.17	ENST00000502372.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	3151	junction_2	1618.51667344585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAAGAACCCCCTTTCC	57	False	NA	20	True	AAAAAG	-40	NA	129183864	129170231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171539_129171633_129171772_129183775
transcript_139302.known	chr3	+	3078	24	FSM	ENSG00000181789.14	ENST00000314797.10	3078	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	128.163161014427	821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTACTTCTGCAGAC	-23	True	NA	34	True	AATAAA	-20	NA	129249605	129277773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252695_129252875_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
transcript_13931.known	chr1	+	3877	27	FSM	ENSG00000143569.19	ENST00000428931.6	3877	27	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_26	264.541830676199	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	17	True	NA	7	True	TATAAA	-14	NA	154220954	154270847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
transcript_139337.known	chr3	+	2485	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	214.463477854234	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	22	True	NA	15	True	AATAAA	-15	NA	129278869	129306186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_139343.known	chr3	+	1763	7	FSM	ENSG00000183624.14	ENST00000389735.7	1763	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	243.967495558095	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	-8	True	NA	13	True	AATAAA	-25	NA	129278973	129305262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129279212_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_139348.nic	chr3	+	1672	7	NIC	ENSG00000183624.14	novel	1952	7	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	256.493448042808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	25	False	NA	44	True	AATAAA	-15	NA	129278927	129305293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_129279044_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_13935.known	chr1	+	3997	27	FSM	ENSG00000143569.19	ENST00000271877.11	3997	27	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_26	345.096719141359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	543	False	NA	33	True	AAAACA	-40	NA	154220848	154271509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
transcript_139350.known	chr3	+	1490	6	FSM	ENSG00000183624.14	ENST00000417226.6	1490	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	254.189692946036	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	-2	True	NA	44	True	AATAAA	-15	NA	129278845	129305293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
transcript_139361.nic	chr3	+	1345	5	NIC	ENSG00000206417.8	novel	917	4	NA	NA	-303	357	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	24.4067101429095	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTCAGGTAGTT	NA	False	NA	29	True	ATTAAA	-18	NA	129315088	129318668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_129315639_129315805_129315904_129317153_129317346_129317931_129318311_129318542
transcript_139362.known	chr3	-	1516	1	FSM	ENSG00000184897.6	ENST00000333762.6	1516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCTCGTTTAATCTGA	-1	True	NA	-10	True	AATAAA	-17	NA	129316286	129314770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129314800_129316300
transcript_139363.nic	chr3	-	666	3	ISM	ENSG00000251474.7	ENST00000510078.5	2161	5	-48	13380	-14	-84	5prime_fragment	FALSE	canonical	3	29	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAAGCACGTGCTGCCC	-23	True	NA	NA	False	NA	NA	NA	129399453	129396301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_129396421_129397039_129397141_129399007
transcript_139364.known	chr3	-	498	4	FSM	ENSG00000251474.7	ENST00000506593.1	498	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTCTGAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	129399655	129396195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129396421_129397039_129397141_129399380_129399496_129399598
transcript_139366.known	chr3	-	2139	9	FSM	ENSG00000172771.12	ENST00000505956.6	2139	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	1.53602571593056	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGACCCAGCTGATGTG	-19	True	NA	1	True	CATAAA	-26	NA	129428636	129401320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129401852_129402522_129402580_129404249_129404404_129408644_129408859_129411157_129411355_129415244_129415402_129418253_129418449_129421366_129421804_129428439
transcript_139371.known	chr3	+	4075	30	FSM	ENSG00000163913.14	ENST00000348417.7	4075	30	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	40.7721839851673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGCTCCGAGTTGTTCG	-44	True	NA	NA	False	NA	NA	NA	129440223	129520507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129466889_129467067_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_139374.known	chr3	+	3841	29	FSM	ENSG00000163913.14	ENST00000347300.6	3841	29	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	26.3116137933074	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	1	True	NA	18	True	AATAAA	-18	NA	129440124	129520351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_139378.nic	chr3	+	3825	28	FSM	ENSG00000163913.14	ENST00000691583.1	3922	28	-44	141	24	0	multi-exon	FALSE	canonical	3	22	junction_15	34.2380915586755	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGTGTTTCTTGCCC	NA	False	NA	12	True	AATAAA	-12	NA	129440080	129520345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_139388.known	chr3	+	3569	27	FSM	ENSG00000163913.14	ENST00000349441.6	3569	27	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_19	32.7347462105246	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	-24	True	NA	18	True	AATAAA	-18	NA	129440243	129520351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_139394.known	chr3	+	3541	26	NNC	ENSG00000163913.14	novel	3650	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	45.5110360242436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGCCCAGATGAAGTT	-31	True	NA	22	True	AATAAA	-22	NA	129440236	129520355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_129440372_129449870_129449938_129451913_129451999_129463544_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_139407.known	chr3	-	2470	8	FSM	ENSG00000129071.10	ENST00000249910.5	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	73.6937956018285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGATTCCTCTGGCAT	16	False	NA	NA	False	AATAAA	-23	NA	129440009	129430949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_139408.known	chr3	-	2394	8	FSM	ENSG00000129071.10	ENST00000429544.7	2394	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	34.0072021183509	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTCCTCTGGCATTGT	2	True	NA	NA	False	AATAAA	-26	NA	129439948	129430946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
transcript_139413.known	chr3	-	2099	8	FSM	ENSG00000129071.10	ENST00000503197.5	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	110.512350404092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	18	False	NA	0	True	AATAAA	-29	NA	129440007	129431265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_139414.nic	chr3	-	2113	8	NIC	ENSG00000129071.10	novel	2099	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	95.5187768697541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	-14	True	NA	0	True	AATAAA	-29	NA	129440039	129431265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
transcript_139416.known	chr3	-	2194	7	FSM	ENSG00000129071.10	ENST00000507208.1	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	79.5335359036258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGGAAGGTTTGGGC	-10	True	NA	NA	False	NA	NA	NA	129440035	129432175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_139427.known	chr3	+	1212	5	FSM	ENSG00000178804.8	ENST00000324382.7	1212	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGGGTAGAGGCTGA	9313	False	NA	NA	False	AATAAA	-26	NA	129543174	129551467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129543307_129547390_129547681_129549000_129549365_129550744_129550810_129551106
transcript_139428.known	chr3	-	6913	36	FSM	ENSG00000004399.13	ENST00000324093.9	6913	36	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_24	10.5891742947643	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCTCCAGCCTTTGT	16	True	NA	-1	True	AATAAA	-20	NA	129606676	129555213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129556429_129556616_129556692_129557082_129557224_129558427_129558576_129559619_129559784_129560329_129560435_129560688_129560724_129561645_129561710_129561799_129561904_129562786_129562944_129563093_129563241_129565339_129565539_129565886_129566018_129566526_129566632_129567491_129567605_129567697_129567806_129569842_129569958_129570785_129570936_129571039_129571304_129571508_129571600_129571676_129571845_129572608_129572749_129572841_129572942_129573593_129573746_129574335_129574491_129575468_129575563_129575765_129575856_129578328_129578434_129583566_129583670_129584124_129584234_129584384_129584563_129585951_129586082_129586171_129586273_129586587_129586720_129589350_129589528_129605328
transcript_139430.known	chr3	-	1701	4	FSM	ENSG00000004399.13	ENST00000504524.5	1701	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	5.55777733351102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCTCCAGCCTTTGT	8847	False	NA	-1	True	AATAAA	-20	NA	129558697	129555213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129556429_129556616_129556692_129557082_129557224_129558427
transcript_139433.known	chr3	-	6303	7	FSM	ENSG00000172765.18	ENST00000393238.8	6303	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	17.0098010962308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGTCAGACTCATGT	-5	True	NA	-16	True	AATAAA	-16	NA	129893711	129647791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828509_129832773_129832827_129880308_129880560_129893493
transcript_139437.known	chr3	-	5631	4	FSM	ENSG00000172765.18	ENST00000432054.6	5631	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	18.1169043222683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGTCAGACTCATGT	NA	False	NA	-16	True	AATAAA	-16	NA	129688732	129647791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129688176
transcript_139438.known	chr3	+	1732	3	FSM	ENSG00000249846.7	ENST00000504808.3	1732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAGTGTTATGAACGTT	1782	False	NA	31	True	AATACA	-29	NA	130112527	130120579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130112745_130116836_130117093_130119320
transcript_139439.known	chr3	-	5016	20	FSM	ENSG00000196455.8	ENST00000356763.8	5016	20	0	0	0	0	multi-exon	TRUE	canonical	3	196	junction_17	31.3046862226949	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCATCCTAAGAGTTT	22	False	130746851	-12	True	ATTAAA	-28	NA	130746829	130678933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_130679486_130680612_130680722_130680976_130681066_130681490_130681592_130684249_130684382_130686210_130686423_130690489_130690655_130703722_130703889_130705560_130705772_130706947_130707136_130708290_130708493_130716395_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
transcript_139448.nic	chr3	+	3836	29	NIC	ENSG00000017260.20	novel	3690	28	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_28	116.656153559361	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	-28	True	NA	12	True	ATTAAA	-6	NA	130893968	131016684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
transcript_139453.known	chr3	+	4994	28	FSM	ENSG00000017260.20	ENST00000510168.6	4994	28	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	84.4435834913876	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	1	True	NA	23	True	AATAAA	-19	NA	130894083	131003150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_139455.known	chr3	+	3690	28	FSM	ENSG00000017260.20	ENST00000533801.6	3690	28	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_27	127.050566173014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCCAAGCTGTGGTGC	18	True	NA	37	True	ATTAAA	-31	NA	130894014	131016709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131016151
transcript_139459.known	chr3	+	4969	28	FSM	ENSG00000017260.20	ENST00000508532.5	4969	28	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	99.5493687451523	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	-6	True	NA	23	True	AATAAA	-19	NA	130893990	131003150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130894707_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_139462.known	chr3	+	3439	28	FSM	ENSG00000017260.20	ENST00000513801.5	3439	28	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_27	122.414293525141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAAGCTGTGGTGCATT	-18	True	NA	40	True	ATTAAA	-34	NA	130894177	131016712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
transcript_139471.known	chr3	+	4714	27	FSM	ENSG00000017260.20	ENST00000504948.5	4714	27	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	83.1445949454266	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	-18	True	NA	23	True	AATAAA	-19	NA	130894177	131003150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_139487.known	chr3	+	2208	3	FSM	ENSG00000246082.3	ENST00000499077.3	2243	3	35	0	-32	0	multi-exon	FALSE	canonical	3	68	junction_1	41	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGACCATATAGTAGT	11	True	NA	2	True	AATAAA	-16	NA	131361897	131365122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131362069_131362171_131362442_131363355
transcript_139488.nic	chr3	+	2617	2	ISM	ENSG00000246082.3	ENST00000499077.3	2243	3	-51	591	-33	0	intron_retention	FALSE	canonical	3	68	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	9312	False	NA	16	True	AATAAA	-28	NA	131361811	131364531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_131362069_131362171
transcript_139489.known	chr3	+	1706	2	FSM	ENSG00000246082.3	ENST00000498923.3	1773	2	67	0	-18	0	multi-exon	FALSE	canonical	3	150	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	25	True	NA	16	True	AATAAA	-28	NA	131361911	131364531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131362442_131363355
transcript_139490.known	chr3	+	6108	3	FSM	ENSG00000198585.12	ENST00000521288.2	6108	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	4	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCAGGTTCTCACTTAT	-10	True	NA	25	True	AATAAA	-40	NA	131381773	131388830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131381943_131382045_131382316_131383161
transcript_139492.known	chr3	+	1552	2	FSM	ENSG00000198585.12	ENST00000502852.1	1552	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATGATACCAGATGA	1	True	NA	-11	True	NA	NA	NA	131381784	131383439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131381943_131382045
transcript_139493.known	chr3	-	1457	11	FSM	ENSG00000114686.9	ENST00000425847.6	1457	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	496.139990325311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATTACCACATTAAA	-15	True	NA	-77	True	ATTAAA	-8	NA	131502983	131462555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502729
transcript_139496.known	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_6	110.49562864936	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-3	True	NA	-12	True	AATAAA	-14	NA	131502971	131462211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
transcript_139499.known	chr3	-	1377	10	FSM	ENSG00000114686.9	ENST00000511168.5	1377	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	403.067895515212	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATCTTAAGATGTCT	-15	True	NA	43	True	NA	NA	NA	131502983	131462435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502848
transcript_139511.known	chr3	-	532	5	FSM	ENSG00000114686.9	ENST00000510154.1	532	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	652.955396639005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGGAAAACTGTAATGGA	-1	True	NA	NA	False	AATATA	-4	NA	131502937	131498246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502794
transcript_139513.known	chr3	-	813	4	FSM	ENSG00000114686.9	ENST00000510923.5	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_1	41.2148840428633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATCTGGAACAAGTAAT	1	True	NA	NA	False	NA	NA	NA	131502967	131497979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131502729
transcript_139514.known	chr3	+	1783	11	FSM	ENSG00000014257.16	ENST00000351273.11	1783	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	6.3718129288296	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAGGTTTAATACACA	-5	True	NA	11	True	AATAAA	-16	NA	132317406	132368298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685_132356856_132367703
transcript_139515.known	chr3	+	7754	56	FSM	ENSG00000138246.17	ENST00000260818.11	7754	56	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	22.4132044905942	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTTCTAGTTTAAT	-9	True	NA	30	True	AATAAA	-27	NA	132417501	132539032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_132417761_132434537_132434619_132446474_132446551_132447320_132447471_132447897_132447940_132450646_132450848_132453297_132453505_132453598_132453695_132454065_132454158_132456234_132456402_132456500_132456581_132456662_132456833_132457268_132457369_132460249_132460358_132461049_132461206_132462466_132462524_132463695_132463818_132465994_132466071_132466298_132466395_132467169_132467314_132473144_132473228_132474931_132475086_132477788_132477893_132477980_132478141_132479226_132479290_132480368_132480471_132482225_132482331_132483374_132483578_132484587_132484673_132488297_132488453_132488975_132489022_132490896_132491052_132492413_132492616_132494143_132494260_132495087_132495167_132496527_132496664_132499125_132499311_132499733_132499809_132500793_132500914_132502288_132502469_132503213_132503382_132505301_132505416_132507236_132507354_132511066_132511245_132513007_132513100_132514570_132514671_132516421_132516497_132516703_132516817_132522827_132522998_132523156_132523200_132523539_132523714_132525609_132525790_132526140_132526282_132528188_132528333_132530997_132531098_132538175
transcript_139516.known	chr3	-	3231	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	10.7035086281513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-2	True	NA	-3	True	ATTAAA	-19	NA	132659809	132558140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_139521.known	chr3	-	2940	18	FSM	ENSG00000240303.8	ENST00000485198.5	2940	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	18.1050376288825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCAAGAATTTGACCTGG	-5	True	NA	NA	False	AATAAA	-41	NA	132660066	132558471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_139526.known	chr3	-	1891	11	FSM	ENSG00000240303.8	ENST00000481970.2	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	6.43816744112795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGATTACCTACTATG	3	True	NA	NA	False	AATAAA	-19	NA	132659844	132618249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_139529.known	chr3	+	4692	12	FSM	ENSG00000081307.15	ENST00000356232.10	4692	12	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	21.5494817870235	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGGTATATTTGT	-38	True	NA	42	True	ACTAAA	-38	NA	132660328	132679794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_132660699_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_13953.known	chr1	+	3451	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	294.636496263711	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	543	False	NA	27	True	AATAAA	-23	NA	154220848	154263505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_13954.nic	chr1	+	3464	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	727	junction_24	179.918326378017	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	551	False	NA	27	True	AATAAA	-23	NA	154220856	154263505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_139543.known	chr3	+	3727	6	FSM	ENSG00000144868.14	ENST00000321871.11	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	30.3156725143943	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGCTAATACATTTT	3	True	NA	NA	False	AATAAA	-22	NA	133038390	133397775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133038436_133045901_133046021_133229265_133229352_133379751_133381162_133390179_133390335_133395863
transcript_139544.known	chr3	+	2165	6	FSM	ENSG00000144868.14	ENST00000393130.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	33.2601864095798	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	14	True	NA	18	True	AATAAA	-31	NA	133038401	133396228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133038436_133045901_133046021_133229269_133229352_133379751_133381162_133390179_133390335_133395863
transcript_139548.known	chr3	-	6152	28	FSM	ENSG00000163781.14	ENST00000642236.1	6152	28	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_21	42.8237847838077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGAAACTCCATCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	133662380	133600270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652615_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
transcript_139549.known	chr3	-	5761	28	FSM	ENSG00000163781.14	ENST00000260810.10	5761	28	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_21	33.8682997564841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCAGGCCAGGCACGG	-3	True	NA	NA	False	NA	NA	NA	133661941	133600237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652630_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
transcript_139554.known	chr3	-	5219	9	FSM	ENSG00000154917.11	ENST00000543906.5	5219	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	5.40254569624358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGCTTCTTGTCTG	283	False	NA	NA	False	AATAAA	-15	NA	133895595	133824242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133827346_133827427_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_139557.known	chr3	-	5596	8	FSM	ENSG00000154917.11	ENST00000285208.9	5596	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.80654645556407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTCTGTGTTTAAG	-4	True	NA	NA	False	AATAAA	-23	NA	133895882	133824234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_139562.known	chr3	+	2576	7	FSM	ENSG00000144867.13	ENST00000678299.1	2576	7	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	8.45412456864826	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCCTCTCAGCCTCTT	-7	True	NA	8	True	AATAAA	-32	NA	133805814	133821492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552
transcript_139565.nic	chr3	-	540	4	ISM	ENSG00000163781.14	ENST00000260810.10	5761	28	1	57562	1	-8195	5prime_fragment	FALSE	canonical	3	266	junction_3	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAGATATTGATCTCATG	-2	True	NA	NA	False	AAAAAG	-7	NA	133661940	133657799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_133657942_133659015_133659151_133661043_133661135_133661768
transcript_139568.known	chr3	-	4067	14	FSM	ENSG00000174640.15	ENST00000310926.11	4067	14	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_10	20.1068153537212	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACTTGGTCATGAATTT	1	True	NA	-6	True	ATTAAA	-22	NA	134029925	133932700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133934831_133935773_133935898_133938428_133938494_133942604_133942769_133945094_133945261_133947255_133947446_133948535_133948701_133948892_133948972_133951207_133951345_133953662_133953762_133954965_133955194_133973662_133973826_133979480_133979619_134029706
transcript_139571.known	chr3	-	1918	13	FSM	ENSG00000174640.15	ENST00000493729.5	1918	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	37.7675639787489	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGAAAGAAAACCCCA	191	False	NA	12	True	NA	NA	NA	134029914	133934610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133934831_133935773_133935898_133938428_133938494_133942604_133942769_133945094_133945261_133947255_133947446_133948535_133948701_133948892_133948972_133951207_133951345_133953662_133953762_133973662_133973826_133979480_133979619_134029706
transcript_139585.known	chr3	+	2182	13	FSM	ENSG00000182923.20	ENST00000684217.1	2182	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	56.1685830533602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	16	True	NA	14	True	AATAAA	-14	NA	134485753	134561767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_139586.known	chr3	+	1740	13	FSM	ENSG00000182923.20	ENST00000514678.2	1740	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	65.161977665916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTTGCCAAAGCTTC	-32	True	NA	5	True	AATAAA	-19	NA	134486175	134575013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_139587.known	chr3	+	5506	13	FSM	ENSG00000182923.20	ENST00000684677.1	5506	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	62.209993838075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-19	True	NA	NA	False	ATTAAA	-8	NA	134486188	134565022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_139588.known	chr3	+	5045	12	FSM	ENSG00000182923.20	ENST00000682593.1	5045	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	56.7644109201129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	266	False	NA	NA	False	ATTAAA	-8	NA	134486003	134565022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486053_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_139589.known	chr3	+	1835	12	FSM	ENSG00000182923.20	ENST00000354446.7	1835	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	51.3744960362163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTATTTTGCCAAAGCT	53	False	NA	3	True	AATAAA	-17	NA	134485790	134575011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_139591.known	chr3	+	5033	12	FSM	ENSG00000182923.20	ENST00000682689.1	5033	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	62.5820453220747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-25	True	NA	NA	False	ATTAAA	-8	NA	134486182	134565022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545572_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_139592.known	chr3	+	1655	12	FSM	ENSG00000182923.20	ENST00000508778.2	1655	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	67.0686092528199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	54	False	NA	-4	True	AATAAA	-10	NA	134486109	134575004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_139593.known	chr3	+	5095	12	FSM	ENSG00000182923.20	ENST00000684492.1	5095	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	63.5127370579716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	9	True	NA	NA	False	ATTAAA	-8	NA	134486457	134565022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486557_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_139596.known	chr3	+	7529	13	FSM	ENSG00000182923.20	ENST00000683177.1	7529	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	66.879867424111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGGATGAACCTTGA	-13	True	NA	NA	False	AAAAAG	-31	NA	134486194	134567117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486557_134488018_134488091_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_139597.nic	chr3	+	1105	7	ISM	ENSG00000182923.20	ENST00000683940.1	2005	13	14	15747	-8	15	5prime_fragment	FALSE	canonical	3	66	junction_1	40.6301065166651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAGGGAATCTGAAAAACT	-3	True	NA	NA	False	AAAAAG	-9	NA	134485734	134545792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585
transcript_139598.known	chr3	+	7253	12	FSM	ENSG00000182923.20	ENST00000682042.1	7253	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	41.9639751049823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGGATGAACCTTGA	-11	True	NA	NA	False	AAAAAG	-31	NA	134486044	134567117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_1396.nic	chr1	+	1702	7	NIC	ENSG00000189409.14	novel	1248	8	NA	NA	-52	0	intron_retention	FALSE	canonical	3	44	junction_3	20.757863302587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	0	True	NA	NA	False	GATAAA	-16	NA	1632110	1634654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1632375_1632782_1632914_1632980_1633121_1633187_1633913_1633988_1634100_1634201_1634329_1634450
transcript_13960.nic	chr1	+	3451	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	445	junction_1	218.261295367629	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	-3	True	NA	27	True	AATAAA	-23	NA	154220934	154263505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_139601.known	chr3	+	1132	7	FSM	ENSG00000182923.20	ENST00000504013.6	1132	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.6137498538393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGTATATATATATATA	13	True	NA	NA	False	AAGAAA	-8	NA	134486220	134538527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134538311
transcript_139605.known	chr3	-	1840	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	217	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	NA	False	NA	-3	True	ACTAAA	-19	NA	134486023	134477705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_134478716_134482805_134482932_134485319
transcript_139606.known	chr3	-	1420	3	FSM	ENSG00000129055.13	ENST00000514612.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	261.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTATGCTGGGTCTTTT	-4	True	NA	-8	True	ACTAAA	-14	NA	134485989	134477710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_134478716_134482805_134482932_134485700
transcript_139607.known	chr3	-	1170	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	107.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	0	True	NA	-3	True	ACTAAA	-19	NA	134485985	134477705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_134478716_134482805_134482932_134485951
transcript_139609.known	chr3	+	4674	16	FSM	ENSG00000154928.19	ENST00000398015.8	4674	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	4.33282048247251	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCAGAGTGTGTATCC	-30	True	NA	21	True	ATTAAA	-33	NA	134795259	135260467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134795690_134925815_134925881_134951370_134952053_135106447_135106604_135132713_135133050_135154151_135154277_135162017_135162181_135165967_135166077_135166941_135167007_135179859_135179983_135192575_135192824_135201473_135201690_135241147_135241298_135248315_135248510_135249335_135249492_135259011
transcript_139612.known	chr3	+	2786	14	FSM	ENSG00000154928.19	ENST00000493838.1	2786	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.86333507697216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGACAAAACAATATGC	-16	True	NA	NA	False	AATAAA	-28	NA	135067531	135259370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_135067918_135106447_135106604_135132713_135133050_135154151_135154277_135162017_135162181_135165967_135166077_135166941_135167007_135179859_135179983_135192575_135192824_135201473_135201690_135241147_135241298_135248315_135248510_135249335_135249492_135259011
transcript_139614.known	chr3	+	3912	16	FSM	ENSG00000154928.19	ENST00000647596.1	3912	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	5.9606114526019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTTCTTTTGTTTGCA	2	True	NA	NA	False	NA	NA	NA	134795291	135259754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134795690_134925815_134925881_134951370_134952053_135106447_135106604_135132713_135133050_135154151_135154277_135162017_135162181_135165967_135166077_135166941_135167007_135179859_135179983_135192575_135192824_135201473_135201690_135241147_135241298_135248315_135248510_135249335_135249492_135259028
transcript_139615.known	chr3	-	1735	4	FSM	ENSG00000240086.7	ENST00000653585.1	1735	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.42809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTCATCTGTGAATAGA	NA	False	NA	NA	False	NA	NA	NA	135439867	135354868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_135356322_135379324_135379428_135379780_135379848_135439755
transcript_139616.known	chr3	-	1868	4	FSM	ENSG00000240086.7	ENST00000466206.6	1868	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATAAGTCTCTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	135439864	135354795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_135356322_135379261_135379428_135379780_135379848_135439755
transcript_139617.known	chr3	+	6743	14	FSM	ENSG00000073711.11	ENST00000264977.8	6743	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	13.3270202016663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTCATTAAGGTAATT	-21	True	NA	10	True	AATAAA	-16	NA	135965727	136147894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_135965850_136001058_136003494_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
transcript_139619.known	chr3	+	1782	13	FSM	ENSG00000073711.11	ENST00000490467.5	1782	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.9241475672346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTACCATCGCCTTCC	-5	True	NA	NA	False	NA	NA	NA	135965743	136145384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_135965850_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
transcript_139622.nic	chr3	+	1237	2	ISM	ENSG00000073711.11	ENST00000264977.8	6743	14	-17	145738	-17	-85730	5prime_fragment	FALSE	canonical	3	64	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAATTTTTCTTCTGGG	NA	False	NA	NA	False	CATAAA	-2	NA	135965710	136002156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_135965850_136001058
transcript_139623.known	chr3	-	5186	2	FSM	ENSG00000174579.4	ENST00000309993.3	5186	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTAGAATACTGAAGAG	-7	True	NA	-15	True	AATAAA	-20	NA	136196335	136148916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136152739_136194971
transcript_139626.known	chr3	-	6062	34	FSM	ENSG00000118007.13	ENST00000383202.7	6062	34	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	14.0583854045781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	6	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_139627.known	chr3	-	5951	33	FSM	ENSG00000118007.13	ENST00000236698.9	5951	33	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	20.8917410416174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	6	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_139628.known	chr3	-	1304	8	FSM	ENSG00000118007.13	ENST00000480733.1	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	34.5478077511173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTCTTTATGTCTGTT	18	True	NA	NA	False	ATTAAA	-18	NA	136752366	136518042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136518416_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_139629.known	chr3	+	1841	16	FSM	ENSG00000114054.14	ENST00000469217.5	1841	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	184.155248514821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGCCTTACTGTAAA	5	True	NA	23	True	ATTAAA	-15	NA	136250358	136330170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136259175_136259236_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_139630.known	chr3	+	1877	16	FSM	ENSG00000114054.14	ENST00000468777.5	1877	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	186.299710741113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260262_136260356_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_139633.known	chr3	+	1844	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	180.509205674761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_139634.known	chr3	+	6090	16	FSM	ENSG00000114054.14	ENST00000471595.5	6090	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	135.396110234625	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATGTTGAGTTTTCAT	4	True	NA	NA	False	AATAAA	-22	NA	136250357	136337895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904_136329985_136333401
transcript_139639.known	chr3	+	1799	15	FSM	ENSG00000114054.14	ENST00000251654.9	1799	15	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_10	42.6304121586494	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	-14	True	NA	22	True	ATTAAA	-14	NA	136250339	136330169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_139641.known	chr3	+	1683	14	FSM	ENSG00000114054.14	ENST00000484181.5	1683	14	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_11	142.700870570359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327633_136327733_136328757_136328858_136329904
transcript_139646.known	chr3	+	1715	14	FSM	ENSG00000114054.14	ENST00000462637.5	1715	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	148.196614962659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_139653.known	chr3	+	1929	7	FSM	ENSG00000174564.13	ENST00000329582.9	1929	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.92498812913071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAGTTACATTTTCAAC	-5	True	NA	19	True	AATAAA	-33	NA	136957982	137011085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136958202_136980465_136980593_136982159_136982351_136989440_136989566_136991937_136992089_136995413_136995557_137010112
transcript_139658.known	chr3	+	1937	4	FSM	ENSG00000158092.7	ENST00000288986.6	1937	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	22.9540604009158	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	-16	True	NA	7	True	AATAAA	-21	NA	136862207	136949126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136862320_136927983_136928228_136945582_136946296_136948258
transcript_139661.known	chr3	+	4451	4	FSM	ENSG00000158092.7	ENST00000481752.6	4451	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	60.0518294660722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAATCTCTGAAACGT	-16	True	NA	NA	False	AATAAA	-24	NA	136862207	136951606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136862354_136927983_136928228_136945582_136946296_136948258
transcript_139666.known	chr3	-	827	4	FSM	ENSG00000239213.7	ENST00000474250.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	47.6398525979621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTTACCTTTTTTTC	-13	True	NA	-118	True	GATAAA	-5	NA	136862049	136842190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136858517_136858604_136861746
transcript_139668.known	chr3	-	518	4	FSM	ENSG00000239213.7	ENST00000666660.1	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAGAGATAAAAAAATTA	3	True	NA	NA	False	AATGAA	-43	NA	136862033	136842207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842294_136846527_136846587_136858517_136858604_136861746
transcript_139670.known	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136861572
transcript_139671.known	chr3	-	1943	3	FSM	ENSG00000239213.7	ENST00000470236.2	1943	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	57.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATGGTGGTTCATGCC	-18	True	NA	NA	False	AATACA	-32	NA	136862054	136841125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136861614
transcript_139672.known	chr3	-	1818	3	FSM	ENSG00000239213.7	ENST00000461864.7	1860	3	42	0	-4	0	multi-exon	FALSE	canonical	3	85	junction_2	15.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-1	True	NA	NA	False	NA	NA	NA	136862037	136841101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136861746
transcript_139677.known	chr3	+	1949	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	10	True	NA	14	True	ATTAAA	-17	NA	136819125	136855888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136819629_136854442
transcript_139678.known	chr3	+	794	2	FSM	ENSG00000158092.7	ENST00000478862.1	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCTCCAAAGTTTTT	2	True	NA	NA	False	NA	NA	NA	136862266	136928724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136862320_136927983
transcript_139679.known	chr3	-	1420	2	FSM	ENSG00000239213.7	ENST00000663856.1	1420	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAAGGCAATTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	136862618	136846038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136846587_136861746
transcript_139680.known	chr3	+	1887	6	FSM	ENSG00000174564.13	ENST00000469964.5	1887	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.01995024844836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAGTTACATTTTCAAC	21	False	NA	19	True	AATAAA	-33	NA	136958008	137011085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136958202_136980330_136980593_136982159_136982351_136989440_136989566_136995413_136995557_137010112
transcript_139684.known	chr3	-	3492	16	FSM	ENSG00000158163.15	ENST00000327532.7	3492	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	7.38466880322559	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTATGTATTTCATTA	12	True	NA	-6	True	AATATA	-39	NA	138115608	138061989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138062978_138064627_138064768_138067530_138067701_138068150_138068368_138071642_138071836_138077498_138077633_138080566_138080621_138081733_138081765_138084112_138084254_138086960_138087024_138088378_138088508_138092382_138092545_138094861_138094984_138097762_138097848_138103470_138104053_138115327
transcript_139694.known	chr3	-	2662	8	FSM	ENSG00000138231.13	ENST00000260803.9	2662	8	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	10.7228537170258	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGATTAGTATAACC	-5	True	NA	63	True	AATAAA	-42	NA	138174921	138160987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138162583_138163348_138163495_138163777_138163859_138167080_138167306_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_139698.known	chr3	+	3043	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	78.6746228525548	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	NA	False	NA	42	True	TATAAA	-6	NA	138187266	138296549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_1397.known	chr1	+	1309	7	FSM	ENSG00000189409.14	ENST00000378675.7	1309	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	20.1859412022879	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	-3	True	NA	NA	False	GATAAA	-16	NA	1632178	1634654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1632375_1632782_1632914_1632980_1633356_1633747_1633913_1633988_1634100_1634201_1634329_1634450
transcript_139704.known	chr3	+	2777	22	FSM	ENSG00000114098.18	ENST00000491704.5	2777	22	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	84.7067236111946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTTTGAATGAAATG	6	True	NA	102	True	TATAAA	-17	NA	138187300	138296394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_139706.known	chr3	+	4757	22	FSM	ENSG00000114098.18	ENST00000469044.6	4757	22	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	72.7931869927561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTTCTAAAAAGGAG	6	True	NA	4	True	AATAAA	-16	NA	138187300	138298373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_139712.nic	chr3	+	2848	21	NIC	ENSG00000114098.18	novel	4757	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_1	81.8083125360742	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	6	True	NA	34	True	AATATA	-41	NA	138187300	138296541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_139715.known	chr3	+	2221	21	FSM	ENSG00000114098.18	ENST00000461822.5	2221	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	88.2524078991616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGGCCAGAATGAATG	-19	True	NA	-38	True	AATGAA	-43	NA	138187516	138296254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_139717.known	chr3	+	4728	21	FSM	ENSG00000114098.18	ENST00000538260.5	4728	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	84.7746424351056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGAGTCTGTTTTCCA	NA	False	NA	15	True	AATAAA	-27	NA	138187247	138298384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_139719.known	chr3	+	1920	20	FSM	ENSG00000114098.18	ENST00000485396.5	1920	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	92.1692108835865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGGAAGTACAGGAACC	-8	True	NA	NA	False	NA	NA	NA	138187527	138295933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_139720.known	chr3	+	2910	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	84.4397796591683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	-7	True	NA	NA	False	NA	NA	NA	138187528	138246857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_139722.known	chr3	+	1656	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	62.6815380045159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	-5	True	NA	7	True	AATAAA	-17	NA	138187530	138245681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_139726.known	chr3	+	1714	11	FSM	ENSG00000114098.18	ENST00000489213.5	1714	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	85.8580223392083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTACTGTGCAAGTTTAA	19	False	NA	24	True	NA	NA	NA	138187349	138245635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_139729.known	chr3	+	4538	6	FSM	ENSG00000158186.13	ENST00000289104.8	4538	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.6182705963792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	138347696	138405533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138348326_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_139731.known	chr3	+	4098	6	FSM	ENSG00000158186.13	ENST00000423968.7	4098	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	6.65131565932636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	0	True	NA	12	True	AATAAA	-14	NA	138348578	138405533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138348768_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_139736.nic	chr3	+	4105	6	NIC	ENSG00000158186.13	novel	1534	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	10.1862652625975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	-27	True	NA	12	True	AATAAA	-14	NA	138348836	138405533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_138349033_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_139737.known	chr3	+	394	2	FSM	ENSG00000158186.13	ENST00000477784.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAGCTTGCCCAAGAT	43	False	NA	NA	False	AAAAAG	-2	NA	138348906	138349951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138349033_138349683
transcript_139743.known	chr3	+	5915	23	FSM	ENSG00000158220.14	ENST00000389567.9	5915	23	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_18	7.23455893439307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTAAGTTTTTCATGT	-2	True	NA	NA	False	AGTAAA	-25	NA	138434615	138479925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468882_138469435_138469505_138470059_138470147_138470876_138471027_138472362_138472860_138473535_138473635_138474220_138474353_138476222_138476329_138476442_138476493_138476817
transcript_139752.known	chr3	+	2398	18	FSM	ENSG00000158220.14	ENST00000490835.5	2398	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	8.23907476244611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCAGATATCAGCCTCAA	-2	True	NA	NA	False	NA	NA	NA	138434615	138472833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468886_138469435_138469505_138470059_138470147_138470876_138471027_138472362
transcript_139758.known	chr3	-	2028	18	FSM	ENSG00000114107.9	ENST00000474781.5	2028	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	88.1766471763723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATCAAATCATTTTTAC	6	True	NA	NA	False	ATTAAA	-19	NA	138594339	138495012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572915_138591853_138591957_138594197
transcript_139759.known	chr3	-	1993	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_16	60.1127544918311	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTGTGTAAATT	28	True	NA	NA	False	ATTAAA	-29	NA	138594224	138495002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_139767.nic	chr3	-	1872	17	NIC	ENSG00000114107.9	novel	1993	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_15	84.5447366782818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTGTGTAAATT	23	True	NA	NA	False	ATTAAA	-29	NA	138594229	138495002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
transcript_139770.known	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_14	48.0595001592355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	4	True	NA	-9	True	ATTAAA	-16	NA	138594248	138499883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_139780.known	chr3	-	1054	6	FSM	ENSG00000114107.9	ENST00000464035.5	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	81.2664752527141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTCAAAATAACTGAT	2389	False	NA	-13	True	AATAAA	-17	NA	138591956	138536918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853
transcript_139782.known	chr3	+	946	5	FSM	ENSG00000158234.13	ENST00000393035.6	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	5.80409338312195	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	77	False	NA	NA	False	AATAAA	-15	NA	138608850	138633376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138608938_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_139783.known	chr3	+	927	5	FSM	ENSG00000158234.13	ENST00000393034.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	47.1062628532555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTGCTTGATTTG	8	True	NA	NA	False	AATAAA	-8	NA	138609071	138633369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138609147_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_139787.known	chr3	-	6259	24	FSM	ENSG00000051382.9	ENST00000674063.1	6259	24	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_22	23.409238316599	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTGCTATCAAATA	25	False	138834953	NA	False	ATTAAA	-17	NA	138834928	138652697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
transcript_139791.known	chr3	-	4658	23	FSM	ENSG00000051382.9	ENST00000477593.5	4658	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_22	46.7893335658587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCTCTTCTTTATGG	201	False	NA	-3	True	AATAAA	-33	NA	138834752	138654017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138834694
transcript_139796.known	chr3	-	4747	23	FSM	ENSG00000051382.9	ENST00000462898.5	4747	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	66.5847034030544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAGTCAAATAAATG	-20	True	NA	2	True	ATTAAA	-29	NA	138834917	138654067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742756_138755753_138755980_138759172_138759360_138834694
transcript_139798.known	chr3	+	974	3	FSM	ENSG00000206262.9	ENST00000470680.5	974	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTGCAGAAGGACCAATG	-10	True	NA	NA	False	NA	NA	NA	138947233	138950879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138947465_138949511_138949640_138950264
transcript_139799.known	chr3	+	4094	3	FSM	ENSG00000206262.9	ENST00000383165.4	4094	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTTTTGTGAAGGGT	-1	True	NA	20	True	AATAAA	-22	NA	138947216	138953990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138947465_138949519_138949640_138950264
transcript_139800.known	chr3	+	1205	8	FSM	ENSG00000175110.14	ENST00000680020.1	1205	8	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_1	48.1269579511593	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	7	True	NA	19	True	ATTAAA	-26	NA	139344019	139357129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_139803.known	chr3	+	1065	8	FSM	ENSG00000175110.14	ENST00000478464.6	4352	8	0	3287	0	-32	multi-exon	TRUE	canonical	3	27	junction_1	156.660428302486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTAAAAATACATT	19	False	NA	-25	True	NA	NA	NA	139344564	139357014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139344719_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_139804.known	chr3	+	600	4	FSM	ENSG00000175110.14	ENST00000465373.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	219.370817465668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCCCAAAAGAAGGTCG	26	False	NA	NA	False	NA	NA	NA	139344038	139350259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139344199_139346850_139347045_139348159_139348325_139350178
transcript_139806.known	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_21	243.057372576181	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-16	True	NA	-5	True	NA	NA	NA	139389670	139357405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
transcript_139812.known	chr3	-	3275	22	FSM	ENSG00000184432.11	ENST00000333188.10	3275	22	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_9	59.9231934700268	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	7	True	NA	-5	True	NA	NA	NA	139389647	139357405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_139814.known	chr3	-	6602	21	FSM	ENSG00000184432.11	ENST00000677309.1	6602	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	213.20770975741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCGTTGCTCTAATT	-3	True	NA	-3	True	AATAAA	-16	NA	139389657	139353945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_139816.known	chr3	-	3373	21	FSM	ENSG00000184432.11	ENST00000512309.2	3373	21	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_8	60.9397243183787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATACTATTAGAC	NA	False	NA	-17	True	ACTAAA	-18	NA	139389736	139357637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_139821.known	chr3	-	3524	2	FSM	ENSG00000184432.11	ENST00000504295.1	3524	2	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	8	True	NA	NA	False	NA	NA	NA	139389646	139380010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139383436_139389547
transcript_139825.known	chr3	+	1201	4	FSM	ENSG00000248932.7	ENST00000653359.1	1201	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.7973274814304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	7	False	NA	NA	False	AATAAA	-18	NA	139389760	139445098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139389934_139419556_139419681_139423015_139423115_139444293
transcript_139832.known	chr3	+	551	3	FSM	ENSG00000248932.7	ENST00000507362.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCAGCAAGGAGGAGAG	-18	True	NA	NA	False	NA	NA	NA	139389817	139444325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139390238_139423015_139423115_139444293
transcript_139834.known	chr3	-	516	4	FSM	ENSG00000114115.10	ENST00000619087.4	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	16.9377946878833	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCTCTTTGCACAGCAT	-2	True	NA	NA	False	NA	NA	NA	139539587	139517573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139517681_139518420_139518523_139538780_139538960_139539459
transcript_139836.known	chr3	-	1569	6	FSM	ENSG00000163864.17	ENST00000296202.11	1569	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.78567765543682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGACAGGATGCTAATT	4	True	NA	NA	False	NA	NA	NA	139677946	139560581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_139837.nic	chr3	-	1886	5	NIC	ENSG00000163864.17	novel	2268	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	1.80277563773199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	7	True	NA	NA	False	AATAAA	-17	NA	139677972	139560190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139677704
transcript_139838.known	chr3	-	794	5	FSM	ENSG00000163864.17	ENST00000512391.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.3166247903554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTGGAAGGATGCGCAC	19	False	NA	NA	False	NA	NA	NA	139678005	139561332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139561393_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_139840.known	chr3	-	873	4	FSM	ENSG00000163864.17	ENST00000511444.5	873	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77123616632825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGGAGAGGAAAGGTCTA	282	False	NA	NA	False	NA	NA	NA	139677742	139560841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139561393_139578871_139579056_139637962_139638063_139677704
transcript_139841.known	chr3	-	688	3	FSM	ENSG00000163864.17	ENST00000511003.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	20	False	NA	-5	True	AATAAA	-19	NA	139678004	139634359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139634648_139637962_139638063_139677704
transcript_139845.nic	chr3	+	1339	8	NIC	ENSG00000114120.14	novel	1163	8	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	116.277289972141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACCAAAAGATTACAGT	NA	False	NA	NA	False	NA	NA	NA	140941768	140976483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966347_140966435_140970926_140970994_140973715_140974006_140976259
transcript_139853.known	chr3	+	1163	8	FSM	ENSG00000114120.14	ENST00000502594.5	1163	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	114.192640672127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACCAAAAGATTACAGT	59	False	NA	NA	False	NA	NA	NA	140941894	140976483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966999_140967037_140970926_140970994_140973715_140974006_140976259
transcript_139858.known	chr3	+	5697	7	FSM	ENSG00000114120.14	ENST00000324194.12	5697	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	72.6605502012994	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGACTTGAGTGCTCT	0	True	NA	17	True	AATAAA	-28	NA	140941835	140980995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976259
transcript_139865.known	chr3	+	3537	4	FSM	ENSG00000114120.14	ENST00000507429.5	3537	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	38.724095283887	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTCTTGCATTTATG	51	False	NA	NA	False	AATAAA	-22	NA	140941886	140966211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126
transcript_139867.nic	chr3	+	587	3	ISM	ENSG00000114120.14	ENST00000507429.5	3537	4	-118	6654	-61	2488	5prime_fragment	FALSE	canonical	3	271	junction_1	33	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAAAGCAAGTTATGG	NA	False	NA	NA	False	NA	NA	NA	140941768	140959557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_140942096_140956526_140956692_140959462
transcript_139869.known	chr3	+	4638	7	FSM	ENSG00000114120.14	ENST00000446041.6	4638	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	113.404389489806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATATGGCTTTTTCTG	-6	True	NA	-16	True	ATTAAA	-10	NA	140941829	140979933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976262
transcript_139874.nnic	chr3	+	2422	3	NNC	ENSG00000175093.5	novel	1752	3	NA	NA	-606	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	54	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTATTAAATGTTGTT	NA	False	NA	24	True	AATAAA	-21	NA	141050740	141148611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_141050846_141065951_141066799_141147141
transcript_139876.known	chr3	+	2963	3	FSM	ENSG00000175093.5	ENST00000310546.3	2963	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	5.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTATTAAATGTTGTT	-6	True	NA	24	True	AATAAA	-21	NA	141051346	141148611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141051993_141065951_141066799_141147141
transcript_139879.known	chr3	+	3160	8	FSM	ENSG00000155893.13	ENST00000393010.6	3160	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	104.182336236396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTTTGTACCTA	28	True	NA	25	True	AATAAA	-25	NA	141231860	141294644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_139881.known	chr3	+	2066	7	FSM	ENSG00000155893.13	ENST00000502783.5	2066	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	101.914043302296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTGAAGTGATTTATC	7	True	NA	NA	False	NA	NA	NA	141231839	141293605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141260122_141260255_141262242_141262341_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_139883.known	chr3	+	3302	6	FSM	ENSG00000155893.13	ENST00000286353.9	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	21.9872690436989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGTATCTGTTGGTAA	-8	True	NA	NA	False	AATAAA	-31	NA	141231824	141294924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_139887.known	chr3	+	629	4	FSM	ENSG00000155893.13	ENST00000514880.5	629	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.263952731361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCAGTACCTCCTACGT	-8	True	NA	NA	False	AAGAAA	-24	NA	141231824	141292537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141260122_141260255_141287313_141287454_141292267
transcript_139889.known	chr3	+	644	3	FSM	ENSG00000177311.12	ENST00000510338.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAATGAAAAAAGGCA	-16	True	NA	NA	False	NA	NA	NA	141402348	141442826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141402450_141403926_141404032_141442388
transcript_139891.known	chr3	+	5638	24	FSM	ENSG00000155903.14	ENST00000286364.9	5638	24	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_19	25.6326381027365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	-22	True	NA	5	True	AATAAA	-17	NA	141487026	141615344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586753_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
transcript_139897.nic	chr3	+	2217	19	ISM	ENSG00000155903.14	ENST00000286364.9	5638	24	-13	28378	-13	6521	5prime_fragment	FALSE	canonical	3	112	junction_16	14.8884742894182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTCCTTCAGTGTGCT	-35	True	NA	16	True	ATTAAA	-20	NA	141487013	141586966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645
transcript_139899.known	chr3	+	862	4	FSM	ENSG00000114125.14	ENST00000477393.1	862	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	737.044548630995	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGCGCACACAGCTTAGA	13	True	NA	17	True	ATTAAA	-28	NA	141738318	141745517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141738510_141742643_141742908_141743508_141743557_141745158
transcript_1399.nic	chr1	-	951	7	ISM	ENSG00000248333.9	ENST00000407249.7	2677	20	-85	6799	-85	-614	5prime_fragment	FALSE	canonical	3	78	junction_3	9.51606828241347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	94	False	NA	NA	False	NA	NA	NA	1659097	1642385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_139900.known	chr3	+	2669	3	FSM	ENSG00000114125.14	ENST00000273480.4	2669	3	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_1	162.5	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTATGTAATTGTT	-8	True	NA	NA	False	CATAAA	-21	NA	141738297	141747560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141738517_141743508_141743557_141745158
transcript_139901.known	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	-29	True	NA	24	True	AATAAA	-17	NA	141738276	141745700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141738517_141745158
transcript_139904.known	chr3	+	1847	7	FSM	ENSG00000069849.11	ENST00000286371.8	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	1686	junction_5	167.264677150384	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTTTTGTGTAAGCAT	0	True	NA	44	True	TATAAA	-33	NA	141876642	141926549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141876911_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_139911.known	chr3	-	1853	14	FSM	ENSG00000114126.18	ENST00000467072.5	1853	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	236.892555476606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	1	True	NA	-23	True	AATAAA	-32	NA	142149532	141952480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142054114_142054150_142093060_142093128_142101734_142101842_142149182
transcript_139916.known	chr3	-	9880	13	FSM	ENSG00000114126.18	ENST00000489671.6	9880	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	195.982283779824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTCTCATTACTAGTG	-11	True	NA	-13	True	AATAAA	-14	NA	142149544	141944427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142101734_142101842_142149182
transcript_13992.known	chr1	-	1678	7	FSM	ENSG00000143612.21	ENST00000368521.10	1678	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	224.485089829048	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-19	True	NA	-19	True	AATAAA	-22	NA	154220590	154206719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_139923.known	chr3	-	2360	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	123.58644747706	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	513	False	NA	-9	True	AAGAAA	-30	NA	142028665	141951501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_139930.known	chr3	-	1442	10	FSM	ENSG00000114126.18	ENST00000495310.5	1442	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	187.931298190339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGGAGATAGTGGG	532	False	NA	NA	False	AAGAAA	-6	NA	142028646	141952275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_142005440_142005545_142028578
transcript_139933.nic	chr3	-	1169	9	NIC	ENSG00000114126.18	novel	1442	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	190.680852473446	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	-1	True	NA	-23	True	AATAAA	-32	NA	142028626	141952480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142005440_142005545_142028578
transcript_139935.known	chr3	-	1403	8	FSM	ENSG00000114126.18	ENST00000477292.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	216.656410013643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCCTTGACGATCGT	-1	True	NA	NA	False	NA	NA	NA	142028626	141952142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142028578
transcript_139938.nic	chr3	-	1083	8	ISM	ENSG00000114126.18	ENST00000489671.6	9880	13	-23	29677	-23	0	5prime_fragment	FALSE	canonical	3	103	junction_5	186.075911654247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAAGTGGATTGGCCT	NA	False	NA	15	True	AATGAA	-23	NA	142149567	141974104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142101734_142101842_142149182
transcript_139945.nic	chr3	-	798	6	ISM	ENSG00000114126.18	ENST00000489671.6	9880	13	-23	49145	-23	0	5prime_fragment	FALSE	canonical	3	103	junction_3	191.088042535372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGAAAATTTATAGACTC	NA	False	NA	-35	True	NA	NA	NA	142149567	141993572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142101734_142101842_142149182
transcript_139946.known	chr3	-	746	7	FSM	ENSG00000114126.18	ENST00000478006.5	746	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_6	220.351739019434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACAAGTGAGTGGAGAA	-6	True	NA	NA	False	AATACA	-34	NA	142028631	141963819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142028578
transcript_139952.known	chr3	-	865	9	FSM	ENSG00000114126.18	ENST00000467667.5	865	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_4	123.6122971229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGACATAGAAGTACTA	581	False	NA	NA	False	NA	NA	NA	142028597	141959799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_139953.known	chr3	-	596	5	FSM	ENSG00000114126.18	ENST00000476617.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	58.8148578167116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAATAAACCCTCACCAG	12	True	NA	NA	False	NA	NA	NA	142149470	142000324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142000355_142005440_142005545_142093060_142093128_142101734_142101842_142149182
transcript_139954.known	chr3	-	4479	17	FSM	ENSG00000175066.16	ENST00000480757.5	4479	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	6.45053292372033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCTGCTCTGTTGTTTT	41	False	NA	2	True	ATTAAA	-22	NA	142225548	142163908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142184710_142185794_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_139956.known	chr3	-	9815	16	FSM	ENSG00000175066.16	ENST00000392993.7	9815	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	7.2467617289073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTTATTTGCTTTG	4	True	NA	-2	True	ATTAAA	-18	NA	142225585	142157526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_139966.known	chr3	+	3700	16	FSM	ENSG00000120756.13	ENST00000457734.7	3700	16	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_14	48.2505497953708	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTATATTTATTTCAT	-23	True	NA	18	True	AATAAA	-20	NA	142596392	142713664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_13998.known	chr1	-	1610	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_5	117.559176587793	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	5	True	NA	-19	True	AATAAA	-22	NA	154220624	154206719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_139984.known	chr3	-	1896	9	FSM	ENSG00000163710.9	ENST00000295992.8	1896	9	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_6	9.23309265630969	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAACAACCACTAAAC	-3	True	NA	NA	False	AATAAA	-15	NA	142889083	142817873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142818466_142820877_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142848216_142848473_142887668_142887778_142888813
transcript_139985.known	chr3	-	2022	9	FSM	ENSG00000163710.9	ENST00000648195.1	2022	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.6003157370507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGTCTTGCGTTTTCT	-21	True	NA	NA	False	NA	NA	NA	142889206	142817925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142818466_142820877_142821101_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142848216_142848473_142887668_142887778_142888813
transcript_139989.known	chr3	-	666	2	FSM	ENSG00000163710.9	ENST00000483454.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCACTTAATGTTCC	258	False	NA	NA	False	AATAAA	-1	NA	142888927	142887225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142887778_142888813
transcript_139990.known	chr3	+	3491	28	FSM	ENSG00000163714.18	ENST00000493598.6	3491	28	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_9	115.745036957301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	23	True	NA	21	True	AATAAA	-21	NA	143001620	143056846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_139992.known	chr3	+	7424	28	FSM	ENSG00000163714.18	ENST00000473835.7	7424	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	188.148206474182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGTTAGGAAAGTTC	-28	True	NA	NA	False	TTTAAA	-31	NA	143001569	143060725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_139997.nic	chr3	+	2786	26	Fusion	ENSG00000163714.18_ENSG00000241570.8	novel	7424	28	NA	NA	5	-73	multi-exon	FALSE	canonical	0	0	junction_15	193.031785983552	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAAGAAAGATAAAGAA	4	False	NA	NA	False	TATAAA	-44	NA	143001528	143053709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675
transcript_139999.nic	chr3	+	2716	26	ISM	ENSG00000163714.18	ENST00000473835.7	7424	28	32	7016	-8	-73	5prime_fragment	FALSE	canonical	0	0	junction_15	195.433262266176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAAGAAAGATAAAGAA	4	True	NA	NA	False	TATAAA	-44	NA	143001601	143053709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675
transcript_14.known	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00042_+_0_1000
transcript_140002.known	chr3	+	3557	27	FSM	ENSG00000163714.18	ENST00000488497.7	3557	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	238.469193425519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAACGGTCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	143001167	143056500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_140003.nic	chr3	+	2683	25	ISM	ENSG00000163714.18	ENST00000473835.7	7424	28	32	9675	-8	-2732	5prime_fragment	FALSE	canonical	0	0	junction_15	199.424780445048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAATAAGTATACCCAA	4	True	NA	7	True	GATAAA	-14	NA	143001601	143051050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938
transcript_140006.nic	chr3	+	2475	23	Fusion	ENSG00000163714.18_ENSG00000241570.8	novel	7424	28	NA	NA	5	748	multi-exon	FALSE	canonical	0	0	junction_15	203.433076290277	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGTAAGAATCTAAGT	4	False	NA	1	True	AAGAAA	-2	NA	143001528	143038954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893
transcript_140007.nic	chr3	+	2478	23	ISM	ENSG00000163714.18_ENSG00000241570.8	ENST00000473835.7	7424	28	-41	21771	5	748	5prime_fragment	FALSE	canonical	0	0	junction_15	205.950547703019	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGTAAGAATCTAAGT	4	False	NA	1	True	AAGAAA	-2	NA	143001528	143038954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893
transcript_14001.known	chr1	-	1163	6	FSM	ENSG00000143612.21	ENST00000368519.5	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	306.234811868279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTAAAAATCTTCACT	-14	True	NA	NA	False	NA	NA	NA	154220585	154207175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154219835_154219938_154220341
transcript_140011.known	chr3	+	588	6	FSM	ENSG00000163714.18	ENST00000493782.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_4	111.267964841638	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGATTTGCAGATCAAAA	-1	True	NA	NA	False	AAAAAG	-23	NA	143001523	143016888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_140013.known	chr3	+	571	6	FSM	ENSG00000163714.18	ENST00000465175.2	571	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	351.263206157434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGATTTGCAGATCAAA	630	False	NA	NA	False	AAAAAG	-22	NA	143002227	143016887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143002362_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_140016.nic	chr3	+	347	4	ISM	ENSG00000163714.18	ENST00000493782.5	588	6	78	2480	-8	-1963	5prime_fragment	FALSE	canonical	3	873	junction_3	60.642852468824	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATGTTGAAAATGTATT	4	True	NA	NA	False	ATTAAA	-7	NA	143001601	143014408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310
transcript_140019.nnic	chr3	-	2362	2	NNC	ENSG00000188582.10	novel	1824	3	NA	NA	-195	-6646	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGTCCTCAAACACAG	133	False	NA	NA	False	AATAAA	-26	NA	142963869	142961230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_142963493_142963769
transcript_14002.known	chr1	-	1278	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_5	236.896264217062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAGTTTTTCAGCACA	951	False	NA	5	True	AATAAA	-28	NA	154220533	154211733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_140020.known	chr3	-	561	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTCATTTTTAAT	-15	True	NA	0	True	TTTAAA	-20	NA	143001467	143000906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_143000900_143001500
transcript_140021.nnic	chr3	+	2865	3	NNC	ENSG00000175040.6	novel	4142	2	NA	NA	0	-1044	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCCTCCATTACTTTG	6	True	NA	19	True	AATAAA	-28	NA	143119770	143122970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_143119840_143120072_143120542_143120643
transcript_140022.known	chr3	+	4142	2	FSM	ENSG00000175040.6	ENST00000309575.5	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTTTTATTTCACTGT	6	True	NA	NA	False	AGTAAA	-22	NA	143119770	143124014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143120542_143120643
transcript_140025.known	chr3	-	3564	16	FSM	ENSG00000181804.15	ENST00000316549.11	3564	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	4.30297055016131	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTTTGGCTAATGC	-8	True	NA	NA	False	AATAAA	-17	NA	143848468	143265221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_143266930_143268874_143268981_143363483_143363564_143382059_143382115_143467036_143467191_143493652_143493765_143495334_143495449_143552361_143552451_143574087_143574194_143578584_143578724_143652254_143652361_143693191_143693308_143795000_143795078_143796825_143796904_143832018_143832222_143848147
transcript_140026.known	chr3	+	4330	3	FSM	ENSG00000181744.9	ENST00000315691.8	4330	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	10.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCAGACTATTTCTTAA	-2	True	NA	20	True	AATAAA	-20	NA	143971822	143992368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143972990_143985542_143985847_143989509
transcript_140028.known	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	58.5808625023868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-1	True	NA	-16	True	AATAAA	-14	NA	146161184	146069439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_140032.known	chr3	-	3665	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	32.9734273860065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTGTTGTTCTATT	2552	False	NA	-20	True	AATAAA	-10	NA	146161167	146069443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_140041.nnic	chr3	-	630	3	NNC	ENSG00000163746.12	novel	574	4	NA	NA	48356	0	at_least_one_novel_splicesite	FALSE	canonical	3	3127	junction_1	400.5	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTCATATATATTCTTT	NA	False	NA	-13	True	AATAAA	-17	NA	146411718	146391420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_146391563_146395759_146395922_146411392
transcript_140043.nnic	chr3	-	881	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4866	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_3	1343.81769596921	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTGTTTAGTTTA	NA	False	NA	45	True	AATAAA	-27	NA	146411711	146391362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_146391563_146395759_146395922_146401359_146401560_146411392
transcript_140045.nnic	chr3	-	824	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4866	-57	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_3	1343.81769596921	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCATATATATTCTTTC	NA	False	NA	-12	True	AATAAA	-18	NA	146411711	146391419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_146391563_146395759_146395922_146401359_146401560_146411392
transcript_140046.nnic	chr3	-	681	3	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4866	0	at_least_one_novel_splicesite	FALSE	canonical	3	3127	junction_1	400.5	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTGTTTAGTTTA	NA	False	NA	45	True	AATAAA	-27	NA	146411711	146391362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_146391563_146395759_146395922_146411392
transcript_140048.known	chr3	-	1976	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_5	39.6579121992069	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	-6	True	NA	-23	True	AATAAA	-18	NA	146544607	146515179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_140053.known	chr3	-	996	8	FSM	ENSG00000188313.13	ENST00000448787.6	996	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	138.138351233945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGCTCTGGTTGTATA	-19	True	NA	-119	True	NA	NA	NA	146544620	146515954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_140055.known	chr3	-	1443	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	141.232186884736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACTTCCTTTGAAAA	-6	True	NA	19	True	AAAAAG	-25	NA	146544737	146515816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
transcript_140061.known	chr3	-	701	6	FSM	ENSG00000188313.13	ENST00000463777.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	221.432969541575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-5	True	NA	-21	True	AAAAAG	-40	NA	146544555	146515801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_140063.known	chr3	-	817	6	FSM	ENSG00000188313.13	ENST00000494568.5	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_2	48.6185149917189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTTGTAGATAGAAATC	23	True	NA	-92	True	NA	NA	NA	146544578	146521716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_140069.known	chr3	-	1257	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	44.2743969153982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTGTTGCACTAAAT	4	True	NA	-4	True	AATAAA	-15	NA	146544727	146527942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
transcript_140071.known	chr3	-	3896	26	FSM	ENSG00000071794.16	ENST00000392912.6	3896	26	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	84.769579449234	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGCTAGCATTAGGAGCA	19	True	NA	NA	False	NA	NA	NA	149086504	149030684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149031364_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_140072.known	chr3	-	5306	25	FSM	ENSG00000071794.16	ENST00000465259.5	5306	25	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_13	80.1258450293454	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	1	True	NA	-23	True	AATAAA	-14	NA	149086522	149030126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_140074.known	chr3	-	3633	26	FSM	ENSG00000071794.16	ENST00000494055.5	3633	26	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	105.091579110793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTCATGTTTGATGAT	-31	True	NA	NA	False	AAGAAA	-25	NA	149086554	149030994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149031361_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_140084.known	chr3	+	1890	7	FSM	ENSG00000163754.18	ENST00000296048.10	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_5	27.4696802553895	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	NA	False	NA	9	True	AATAAA	-16	NA	148991451	149027632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026759
transcript_140085.known	chr3	+	1563	6	FSM	ENSG00000163754.18	ENST00000484197.5	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	92.5410179325903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGTTGTTTAATTAAA	21	False	NA	8	True	AATAAA	-15	NA	148991557	149027631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149026759
transcript_14009.known	chr1	-	1551	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	310.170416867889	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	10	True	NA	-19	True	AATAAA	-22	NA	154220619	154206719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
transcript_140090.known	chr3	+	4611	17	FSM	ENSG00000163755.9	ENST00000296051.7	4611	17	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_7	29.8849355863452	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAAAAAGAAATTTTAAG	-22	True	NA	NA	False	NA	NA	NA	149129637	149173732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_140093.known	chr3	+	2745	16	FSM	ENSG00000163755.9	ENST00000460120.5	2745	16	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	76.7163317394384	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAAATGCTTTCAGGCT	-22	True	NA	NA	False	NA	NA	NA	149129637	149172361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149129941_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_140099.known	chr3	+	1894	7	FSM	ENSG00000163755.9	ENST00000486530.1	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	28.3867144198753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGTTGTATTTT	31	True	NA	NA	False	NA	NA	NA	149129690	149154109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_140102.known	chr3	-	606	3	FSM	ENSG00000047457.14	ENST00000497797.5	606	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATCTCACTGGTTATTT	9513	False	NA	NA	False	AATAAA	-22	NA	149199821	149187918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149188203_149198366_149198579_149199711
transcript_140103.known	chr3	-	907	5	FSM	ENSG00000163762.7	ENST00000470080.5	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	6.04152298679729	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATACTTCTGCCC	191	False	NA	NA	False	NA	NA	NA	149333482	149321276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205
transcript_140104.known	chr3	-	1555	5	FSM	ENSG00000169908.12	ENST00000305366.8	1555	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTAGTTTC	-2	True	NA	0	True	AATAAA	-14	NA	149377649	149369021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149369881_149371686_149371868_149375442_149375589_149375679_149375770_149377370
transcript_140105.known	chr3	-	5037	7	FSM	ENSG00000018408.15	ENST00000360632.8	5037	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	9.3392838174146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAGCTTTTGACTTTTC	-3	True	NA	-20	True	AATAAA	-17	NA	149658025	149517234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149520990_149526012_149526126_149527835_149527970_149542334_149542538_149572863_149573001_149656875_149657310_149657764
transcript_14011.known	chr1	-	872	5	FSM	ENSG00000143612.21	ENST00000368516.1	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_4	130.417598505723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAGCACTTTGGGA	1	True	NA	78	True	NA	NA	NA	154220628	154212132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_140110.nic	chr3	-	2510	3	ISM	ENSG00000018408.15	ENST00000360632.8	5037	7	-14	53965	2	1664	5prime_fragment	FALSE	canonical	3	58	junction_2	12.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACACTTCCTCCAATC	-17	True	NA	NA	False	AAAAAG	-15	NA	149658039	149571199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_149573001_149656875_149657310_149657764
transcript_140111.known	chr3	+	468	2	FSM	ENSG00000241313.3	ENST00000466836.1	468	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCGCCCGAACTTGCCG	NA	False	NA	NA	False	NA	NA	NA	149657051	149657806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149657323_149657609
transcript_140113.known	chr3	-	3694	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	41.5030119388943	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTAGACTGAGGATCT	-17	True	NA	-7	True	AATAAA	-21	NA	149752489	149738471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_140116.known	chr3	+	2866	11	FSM	ENSG00000082996.20	ENST00000344229.7	2866	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	131.008434842952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	48	False	NA	3	True	AATAAA	-12	NA	149812769	149962122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149813354_149813924_149814027_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_140118.known	chr3	+	1027	10	FSM	ENSG00000082996.20	ENST00000474348.5	1027	10	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_5	90.8239376724054	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTGACACAGACAGTA	-10	True	NA	NA	False	AAAAAG	-23	NA	149813227	149960833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_140125.known	chr3	+	767	9	FSM	ENSG00000082996.20	ENST00000467996.1	767	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.342617352103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTAGACCCTTGGCT	27	True	NA	NA	False	ACTAAA	-34	NA	149813264	149960750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_140128.known	chr3	+	761	8	FSM	ENSG00000082996.20	ENST00000467977.5	761	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	140.404953688993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGCTAACTAAAACCAAAAA	-23	True	NA	NA	False	NA	NA	NA	149813214	149960765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149813354_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_140130.known	chr3	-	894	3	FSM	ENSG00000070087.15	ENST00000468323.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCTTCGCACATAGGC	-1	True	NA	NA	False	AAAAAG	-41	NA	149970898	149965712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966265_149968357_149968526_149970724
transcript_140131.known	chr3	-	1620	3	FSM	ENSG00000070087.15	ENST00000481767.5	1620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAGATGAAATAAATTTA	1080	False	NA	-4	True	ATTAAA	-13	NA	149970715	149964934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966265_149968357_149968551_149970618
transcript_140132.known	chr3	-	942	3	FSM	ENSG00000070087.15	ENST00000460404.5	942	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	442	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTTCCATCTTTTTT	-7	True	NA	NA	False	NA	NA	NA	149970904	149965688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966265_149968357_149968544_149970724
transcript_140133.known	chr3	-	662	3	FSM	ENSG00000070087.15	ENST00000498169.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAAAGGAAGGTGTCCA	15	True	NA	NA	False	NA	NA	NA	149970882	149966250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966587_149968357_149968526_149970724
transcript_140134.known	chr3	-	637	3	FSM	ENSG00000070087.15	ENST00000475518.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	190	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATAGTCATGGGAAAGGA	0	True	NA	NA	False	NA	NA	NA	149970735	149966259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966587_149968357_149968551_149970618
transcript_140135.known	chr3	-	2261	3	FSM	ENSG00000070087.15	ENST00000239940.12	2047	3	-214	0	104	0	multi-exon	FALSE	canonical	3	380	junction_1	371	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGGCTCCTGTTGTT	686	False	NA	-3	True	AATAAA	-16	NA	149971109	149964903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966587_149968357_149968551_149970724
transcript_140136.known	chr3	-	613	2	FSM	ENSG00000070087.15	ENST00000461868.1	613	2	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACGATAGAATATTCGTAT	855	False	NA	NA	False	NA	NA	NA	149970940	149968153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149968551_149970724
transcript_140138.known	chr3	+	11154	4	FSM	ENSG00000196428.13	ENST00000361875.8	11182	4	37	-9	37	9	multi-exon	FALSE	canonical	3	9	junction_1	54.2115198909686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTGTCTGCTGCTAA	12	False	NA	15	True	AATAAA	-27	NA	150408334	150466431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150411309_150423048_150423121_150457075_150457128_150458375
transcript_140139.known	chr3	+	2093	3	FSM	ENSG00000196428.13	ENST00000466814.1	2093	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	836	False	NA	23	True	ATTAAA	-15	NA	150411008	150460116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150411309_150457075_150457128_150458375
transcript_140144.known	chr3	+	3879	14	FSM	ENSG00000144895.12	ENST00000460851.6	3879	14	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	70.702476878016	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTGGTATTTTGTTA	0	True	NA	NA	False	AATAAA	-18	NA	150546786	150586016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_140148.known	chr3	+	1913	13	FSM	ENSG00000144895.12	ENST00000487799.5	1913	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	169.055135647779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACCATTTATCCAAGAT	8	False	NA	-49	True	NA	NA	NA	150546684	150584023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_140151.known	chr3	+	944	7	FSM	ENSG00000198843.14	ENST00000477889.5	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	446.951681455116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGAAGGCCTGTACTG	-17	True	NA	NA	False	NA	NA	NA	150603290	150627693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150603500_150618708_150618929_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_140154.known	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_4	37.2912858453553	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	13	True	NA	5	True	AATAAA	-16	NA	150603320	150630436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_140160.known	chr3	+	565	3	FSM	ENSG00000144895.12	ENST00000463863.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	38	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCTAAGTTATTGGTT	1	True	NA	NA	False	AATATA	-45	NA	150546677	150558729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150558387
transcript_140161.known	chr3	-	3022	3	FSM	ENSG00000120742.11	ENST00000239944.7	3022	3	0	0	0	0	multi-exon	FALSE	canonical	3	1829	junction_2	13	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGGGCCATGACTCTTC	17	True	NA	-10	True	ATTAAA	-18	NA	150546496	150541997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150544499_150545702_150545779_150546051
transcript_140167.known	chr3	-	830	2	FSM	ENSG00000120742.11	ENST00000491660.1	830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1829	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTAACTCCATTATC	14	True	NA	NA	False	AATAAA	-42	NA	150546499	150545396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150545779_150546051
transcript_140168.known	chr3	-	1596	2	FSM	ENSG00000120742.11	ENST00000490945.1	1596	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATGGAACTAAA	103	False	NA	NA	False	NA	NA	NA	150603228	150565795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150567107_150602943
transcript_140170.known	chr3	+	2083	14	FSM	ENSG00000144895.12	ENST00000273435.9	2083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	164.783953949679	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTATTATAAGT	7	True	NA	13	True	AATGAA	-21	NA	150546793	150584242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562556_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_140173.known	chr3	+	302	3	FSM	ENSG00000240137.7	ENST00000471093.6	539	3	78	159	78	-7	multi-exon	FALSE	canonical	3	8	junction_1	12	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	25	False	NA	15	True	TATAAA	-27	NA	150703563	150719988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150703668_150707931_150708010_150719868
transcript_140175.nic	chr3	-	2119	3	NIC	ENSG00000181788.4	novel	427	3	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	110	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGCTTCATTTCCCTA	2667	False	NA	-19	True	AATAAA	-18	NA	150763547	150741124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_150742699_150762432_150762571_150763140
transcript_140176.known	chr3	-	427	3	FSM	ENSG00000181788.4	ENST00000482706.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	114.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTGCCAGGGGCTGTC	4	True	NA	NA	False	NA	NA	NA	150763431	150742487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150742699_150762432_150762571_150763353
transcript_140178.known	chr3	-	2311	2	FSM	ENSG00000181788.4	ENST00000312960.4	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGCTTCATTTCCCTA	-23	True	NA	-19	True	AATAAA	-18	NA	150763169	150741124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150742699_150762432
transcript_140186.known	chr3	+	6309	1	FSM	ENSG00000169860.7	ENST00000305097.6	6309	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGGCTTCTATGTTAT	1	True	NA	25	True	AATAAA	-15	NA	152835130	152841439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_152835100_152841400
transcript_140189.known	chr3	+	5149	15	FSM	ENSG00000114790.13	ENST00000465093.6	5149	15	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	20.9290589899327	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTGTGCTGGTGTGA	-33	True	NA	6	True	TATAAA	-17	NA	154121389	154257825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_154121520_154121941_154123076_154124409_154124450_154129573_154129720_154149388_154149446_154152771_154152933_154187684_154187838_154191288_154191419_154194643_154194719_154217868_154217959_154225855_154226011_154240369_154240580_154253115_154253184_154254719_154254825_154255330
transcript_140190.known	chr3	+	3781	15	FSM	ENSG00000114790.13	ENST00000496710.5	3781	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	33.9595347435739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	154121415	154256548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_154121520_154121941_154123076_154124409_154124450_154129573_154129720_154149388_154149446_154152771_154152933_154187684_154187838_154191288_154191419_154194643_154194719_154217868_154217959_154225855_154226011_154240369_154240580_154253115_154253184_154254784_154254825_154255330
transcript_140196.known	chr3	-	6723	25	FSM	ENSG00000174953.14	ENST00000496811.6	6723	25	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_22	58.9016217235711	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGATTCAGTGAATTT	-14	True	NA	NA	False	AATAAA	-39	NA	154324487	154272545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_140199.nic	chr3	-	1388	10	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-83	24869	-12	2304	5prime_fragment	FALSE	canonical	3	270	junction_7	38.9161808994982	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAATATATAAAGAACG	-26	True	NA	NA	False	AATAGA	-19	NA	154324499	154301039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_140201.nic	chr3	-	1285	9	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-83	27173	-12	0	5prime_fragment	FALSE	canonical	3	270	junction_6	41.053128687105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTGAAAAAATAAGGTAAG	-26	True	NA	NA	False	NA	NA	NA	154324499	154303343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_140202.nic	chr3	-	724	4	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-83	35466	-12	-1841	5prime_fragment	FALSE	canonical	3	270	junction_1	37.4966665185054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTGCTTTTTTCCAC	-26	True	NA	NA	False	TTTAAA	-45	NA	154324499	154311636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154311675_154315045_154315281_154316038_154316164_154324173
transcript_140203.known	chr3	-	833	3	FSM	ENSG00000174953.14	ENST00000491011.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	9	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGATGTGCTTTGTTC	737	False	NA	NA	False	ATTAAA	-12	NA	154324251	154314650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_154315281_154316038_154316164_154324173
transcript_140205.nic	chr3	-	366	2	ISM	ENSG00000174953.14	ENST00000491011.1	833	3	-248	1473	-12	-1473	5prime_fragment	FALSE	canonical	3	357	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACAGTTACTGAATTCT	-26	True	NA	-29	True	NA	NA	NA	154324499	154316123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154316164_154324173
transcript_140206.known	chr3	+	5593	23	FSM	ENSG00000196549.13	ENST00000460393.6	5593	23	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	21.802124773244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	-9	True	NA	8	True	AATAAA	-21	NA	155079671	155183704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155079757_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_140208.known	chr3	+	5552	23	FSM	ENSG00000196549.13	ENST00000675418.2	5552	23	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	21.0251718480413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	8	True	NA	-18	True	AATACA	-2	NA	155079931	155183678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_140209.known	chr3	+	5656	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.2626474498408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	2	True	NA	8	True	AATAAA	-21	NA	155080318	155183704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_140213.known	chr3	+	1319	4	FSM	ENSG00000196549.13	ENST00000382989.7	1319	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	56.9053795543288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTATTCCAGCATCAC	19	False	NA	NA	False	AATAAA	-15	NA	155080020	155090500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155089833
transcript_140227.nnic	chr3	-	1163	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	17	junction_2	210.424570808639	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAACAAACAAACAA	-4	False	NA	NA	False	AAAAAG	-4	NA	155280499	155203245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155203787_155204791_155204904_155258618_155258683_155278366_155278560_155280246
transcript_140233.nnic	chr3	-	1307	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	186.678031648076	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTATGTCATGAATTC	-4	False	NA	NA	False	AAAAAG	-19	NA	155280499	155250150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_140236.nnic	chr3	-	951	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	186.678031648076	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-4	False	NA	1	True	ATTAAA	-28	NA	155280499	155250506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_140238.nnic	chr3	-	1077	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	223.312934391778	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCAATTCTGATGTCCC	-4	False	NA	NA	False	AAAAAG	-30	NA	155280499	155203219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155203787_155258618_155258683_155278366_155278560_155280246
transcript_140242.nnic	chr3	-	1186	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	125	junction_1	191.86163996195	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTATGTCATGAATTC	-4	False	NA	NA	False	AAAAAG	-19	NA	155280499	155250150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_140244.nnic	chr3	-	895	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	125	junction_1	191.86163996195	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGACTGTAATCCCAG	-4	False	NA	66	True	AATAAA	-17	NA	155280499	155250441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_140247.nnic	chr3	-	830	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	125	junction_1	191.86163996195	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-4	False	NA	1	True	ATTAAA	-28	NA	155280499	155250506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_140250.nnic	chr3	-	993	3	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	48.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTATGTCATGAATTC	-4	False	NA	NA	False	AAAAAG	-19	NA	155280499	155250150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155280246
transcript_140255.known	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	41.8864204990379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-18	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_140256.known	chr3	-	1926	6	FSM	ENSG00000174928.16	ENST00000482061.6	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	29.9599732977184	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAAAGTAGCTTTTTTC	12	True	NA	-11	True	AATAAA	-19	NA	155806266	155762616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155805596_155805724_155806138
transcript_140258.known	chr3	-	9266	6	FSM	ENSG00000169359.16	ENST00000643144.2	9266	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	21.1035542030247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTTTCATTTTTAT	-16	True	NA	NA	False	AATAAA	-13	NA	155854427	155821023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_140262.known	chr3	-	3558	5	FSM	ENSG00000169359.16	ENST00000468581.2	3558	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	59.8806103843306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAACTCTTACATATGA	-5	True	NA	-19	True	AATAAA	-11	NA	155854416	155826532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155853222
transcript_140263.known	chr3	-	2734	4	FSM	ENSG00000169359.16	ENST00000646424.1	2734	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.1054628687498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGCAGTACCATAATT	11	False	155854457	56	True	AGTAAA	-23	NA	155854446	155827268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155828378_155829687_155829904_155833856_155834042_155853222
transcript_140268.known	chr3	+	852	3	FSM	ENSG00000286585.2	ENST00000653103.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGTGTGA	-29	True	NA	NA	False	AATAAA	-14	NA	155854751	155863191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155854979_155858251_155858333_155862647
transcript_14027.known	chr1	+	3864	26	FSM	ENSG00000143569.19	ENST00000361546.6	3864	26	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_25	257.765549288496	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTATTCTTGCTC	3334	False	NA	13	True	TATAAA	-20	NA	154225081	154270853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
transcript_140272.known	chr3	+	8631	16	FSM	ENSG00000163655.16	ENST00000496455.7	8631	16	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_10	107.828547034427	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGACTTATGTGACTT	-5	True	NA	6	True	ATTAAA	-17	NA	155870649	155944020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155870898_155893517_155893700_155897926_155898042_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_140278.known	chr3	+	2024	14	FSM	ENSG00000163655.16	ENST00000295920.7	2024	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	289.131447758351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCGTGTGCAGTTTA	-5	True	NA	-3	True	AATAAA	-15	NA	155870649	155937710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155870898_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_140282.known	chr3	+	1546	12	FSM	ENSG00000169282.18	ENST00000497291.5	1546	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	4.44804720826366	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAGTATCT	NA	False	NA	NA	False	ATTAAA	-17	NA	156457209	156537241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_156457359_156457452_156457533_156459826_156459872_156463701_156463747_156465642_156465687_156474733_156474821_156514363_156514450_156515099_156515221_156516269_156516365_156523826_156523948_156531408_156531498_156536657
transcript_140286.known	chr3	-	807	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	496.747106181808	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTACTAGGACGTTT	-17	True	NA	-9	True	ATTAAA	-17	NA	156555125	156543003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
transcript_140290.known	chr3	-	873	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_1	115.557585452256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGCCAATGCAGTTA	-9	True	NA	NA	False	NA	NA	NA	156555117	156543953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
transcript_140291.nic	chr3	+	1790	5	ISM	ENSG00000163659.13	ENST00000295924.12	3861	6	-23	3075	-23	0	5prime_fragment	FALSE	canonical	1	4	junction_3	1.4790199457749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGGTGAGTCAGATGT	18	False	NA	NA	False	NA	NA	NA	156674566	156703695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_156674797_156677656_156678615_156694019_156694189_156695864_156696026_156703423
transcript_140292.known	chr3	-	509	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	0	3	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTCTAGGCTCTACC	NA	False	NA	NA	False	AATAAA	-17	NA	156674446	156671861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156672131_156674206
transcript_140293.known	chr3	+	3861	6	FSM	ENSG00000163659.13	ENST00000295924.12	3861	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.49666295470958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTTGGTTCC	1	True	NA	26	True	AATAAA	-38	NA	156674589	156706770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_156674797_156677656_156678615_156694019_156694189_156695864_156696026_156703423_156703703_156704683
transcript_140294.known	chr3	-	3306	3	FSM	ENSG00000240875.6	ENST00000472943.5	3306	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGTAATTGTAGTTTG	-30	True	NA	NA	False	AATAAA	-20	NA	156817034	156747345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156750415_156751094_156751184_156816886
transcript_140295.known	chr3	-	2457	13	FSM	ENSG00000163660.12	ENST00000631619.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	85.2519142828411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	398	False	NA	-7	True	AATAAA	-24	NA	157160363	157147795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
transcript_140298.nic	chr3	-	2567	13	NIC	ENSG00000163660.12	novel	2457	13	NA	NA	-185	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	81.1745376060471	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	213	False	NA	-7	True	AATAAA	-24	NA	157160548	157147795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_14030.known	chr1	+	842	7	FSM	ENSG00000143575.15	ENST00000447768.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	243.575735427174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTATTCCTGGGACGT	-15	True	NA	NA	False	NA	NA	NA	154272619	154275663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273535_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_140304.known	chr3	-	2322	11	FSM	ENSG00000163660.12	ENST00000295926.8	2322	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	39.041132155715	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTGCTTTTGAATGG	-15	True	NA	NA	False	ATTAAA	-29	NA	157160147	157147552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_14031.known	chr1	+	1151	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	241.363775704272	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	-26	True	NA	27	True	AATAAA	-16	NA	154272608	154275873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_140313.nic	chr3	-	1091	9	ISM	ENSG00000163660.12	ENST00000476367.5	1603	11	-86	936	-18	0	5prime_fragment	FALSE	canonical	3	51	junction_5	60.8028319652958	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTAGCCTTACAAGAA	-3	True	NA	NA	False	AAAAAG	-13	NA	157160196	157149940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_140315.known	chr3	-	1998	11	FSM	ENSG00000163660.12	ENST00000461804.5	1998	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.9843460503903	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTATGTCCCTAAT	1	True	NA	NA	False	ATTAAA	-16	NA	157160760	157146507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157146608_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_140316.nic	chr3	-	1200	8	ISM	ENSG00000163660.12	ENST00000476367.5	1603	11	-232	1060	21	63	5prime_fragment	FALSE	canonical	3	51	junction_4	62.9982183097592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTCTATTTACTCGTT	419	False	NA	NA	False	AAAAAG	-1	NA	157160342	157150064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_140321.known	chr3	-	753	3	FSM	ENSG00000163660.12	ENST00000471044.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGCAGTTGCATTTA	603	False	NA	NA	False	AAAAAG	-29	NA	157160158	157158664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157158976_157159404_157159480_157159791
transcript_140323.known	chr3	-	549	4	FSM	ENSG00000163660.12	ENST00000295925.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	50.7630661888039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGCAACAGTGAGTGA	667	False	NA	NA	False	NA	NA	NA	157160094	157157022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157157084_157158865_157158976_157159404_157159480_157159791
transcript_140327.nic	chr3	-	1143	5	NIC	ENSG00000197415.12	novel	992	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	17.1664644001029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	6	True	NA	-10	True	AATGAA	-29	NA	157499546	157459621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_140328.known	chr3	-	1714	5	FSM	ENSG00000197415.12	ENST00000494677.5	1714	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.0249843945008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAATGTCCCCATTTCTC	-2	True	NA	93	True	AATACA	-20	NA	157503574	157459518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394_157499657_157503470
transcript_140329.known	chr3	+	1884	3	FSM	ENSG00000163661.4	ENST00000295927.4	1884	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTACTTTTCTCTTTTCA	0	True	NA	49	True	TATAAA	-24	NA	157436849	157443633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_157437064_157437512_157437915_157442365
transcript_140330.known	chr3	+	883	3	FSM	ENSG00000174899.13	ENST00000468043.6	920	3	32	5	4	-5	multi-exon	FALSE	canonical	3	6	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGTTGAATTCCTTTT	-28	True	NA	NA	False	AATAAA	-26	NA	157543343	157569912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_157543510_157553229_157553341_157569306
transcript_140332.known	chr3	+	1607	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	34.6435107849388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	-21	True	NA	-92	True	AATAAA	-3	NA	158110076	158544734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
transcript_140335.known	chr3	+	2597	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.5132117320231	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	-9	True	NA	NA	False	AATAAA	-16	NA	158110088	158545730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_140339.nic	chr3	+	1850	8	ISM	ENSG00000174891.14	ENST00000480119.5	1335	11	-56	82460	0	0	5prime_fragment	FALSE	canonical	0	0	junction_5	45.5689654506759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	-25	True	NA	NA	False	NA	NA	NA	158110072	158461983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158225656_158225734_158298038_158298076_158354856_158354909_158460934
transcript_14034.known	chr1	+	1109	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_4	39.5281193863586	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-6	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_140340.known	chr3	+	1727	10	FSM	ENSG00000174891.14	ENST00000295930.7	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.4787348752564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTAGATGCTCCTT	4156	False	NA	9	True	AATAAA	-24	NA	158110051	158544835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_140342.known	chr3	+	2677	9	FSM	ENSG00000174891.14	ENST00000482822.3	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.5508152003951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	-23	True	NA	NA	False	NA	NA	NA	158110074	158545101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_140343.known	chr3	+	1757	7	FSM	ENSG00000174891.14	ENST00000684683.1	1757	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.2014211299209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	-9	True	NA	NA	False	NA	NA	NA	158110088	158461983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_140345.known	chr3	+	769	7	FSM	ENSG00000174891.14	ENST00000471994.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.7961836950683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAATGAGGAAGAAG	-30	True	NA	NA	False	NA	NA	NA	158110067	158460962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_140347.known	chr3	+	2746	9	FSM	ENSG00000174891.14	ENST00000683137.1	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	32.7697936368235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	-12	True	NA	NA	False	NA	NA	NA	158110386	158545101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_140350.known	chr3	+	1069	4	FSM	ENSG00000174891.14	ENST00000684156.1	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	22.7596133534821	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATTGTTTAAGCCTT	-9	True	NA	NA	False	TATAAA	-29	NA	158110088	158203695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071
transcript_140351.known	chr3	+	7727	4	FSM	ENSG00000174891.14	ENST00000683394.1	7727	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	26.4112770527204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAAATTTATTGAAAAA	-9	True	NA	NA	False	NA	NA	NA	158110088	158210341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071
transcript_140355.known	chr3	+	1247	8	FSM	ENSG00000178053.20	ENST00000484955.5	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	294.850013756562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	-14	True	NA	8	True	AATAAA	-18	NA	158571172	158605397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571392_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_140357.known	chr3	+	2168	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	56.8782813461245	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	7	True	NA	15	True	AATAAA	-16	NA	158571193	158606456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_140359.known	chr3	+	2222	7	FSM	ENSG00000178053.20	ENST00000359117.9	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	214.181906072593	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	-3	True	NA	15	True	AATAAA	-16	NA	158571183	158606456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571392_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_140361.known	chr3	+	1937	6	FSM	ENSG00000178053.20	ENST00000650753.1	1937	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	252.351025359518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATACTTCTCTAATTT	7	True	NA	-1	True	AGTAAA	-13	NA	158571193	158606358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158605096
transcript_140363.known	chr3	+	1959	6	FSM	ENSG00000178053.20	ENST00000619577.5	1959	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	267.517027495447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACTATGTTCATACT	4	True	NA	-11	True	AGTAAA	-3	NA	158571190	158606348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571392_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_140365.known	chr3	+	992	6	FSM	ENSG00000178053.20	ENST00000491767.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	269.105629818479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	1	True	NA	8	True	AATAAA	-18	NA	158571162	158605397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571348_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_140367.known	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	124.635678957254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	25	True	NA	13	True	AATAAA	-13	NA	158644596	158692569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_140368.known	chr3	+	6478	18	FSM	ENSG00000168827.15	ENST00000486715.6	6478	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	87.149475855386	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGGATTATGGATGT	-45	True	NA	16	True	AATAAA	-30	NA	158644526	158695581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_14037.known	chr1	+	914	7	FSM	ENSG00000143575.15	ENST00000457918.6	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	216.725633001729	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGCTTGGATATGTG	1801	False	NA	-62	True	NA	NA	NA	154272588	154275784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273479_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_140374.known	chr3	-	1071	6	FSM	ENSG00000079257.8	ENST00000264265.4	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	9.52050418832953	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATTACGTTGCA	-36	True	NA	-1	True	AATAAA	-21	NA	158672648	158666413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_158666745_158667011_158667075_158668995_158669133_158669432_158669611_158670956_158671020_158672349
transcript_140375.known	chr3	+	3470	18	FSM	ENSG00000168827.15	ENST00000478254.5	3470	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	87.6582701080685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGCTTTTCTTGACT	-44	True	NA	16	True	AATAAA	-16	NA	158644527	158692572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652251_158653313_158653468_158654546_158654632_158658921_158659071_158660882_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_140376.known	chr3	+	1594	16	FSM	ENSG00000118855.21	ENST00000264266.12	1594	16	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	7.33818021643574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAAGTGTATTTGTG	-10	True	NA	NA	False	AATATA	-3	NA	158802090	158829116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158802316_158804318_158804372_158805361_158805475_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_140379.known	chr3	-	839	4	FSM	ENSG00000118849.10	ENST00000479756.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAAGTATTGTTTCAG	331	False	NA	NA	False	AATAAA	-18	NA	158732442	158704650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_158704928_158710737_158710934_158713796_158713860_158732139
transcript_140386.nic	chr3	+	2218	8	NIC	ENSG00000283154.3	novel	1884	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	40.9250185443714	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATATGTCTTTTTGCT	302	False	NA	14	True	AATAAA	-18	NA	159763991	159897358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_159764225_159764442_159765139_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_140391.nic	chr3	+	1159	5	NIC	ENSG00000283154.3	novel	1884	7	NA	NA	90	-4741	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	40.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAGCTGAAGCCAAAAT	0	True	NA	NA	False	AAGAAA	-1	NA	159764091	159887800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_159764225_159764442_159765139_159866162_159866282_159886206_159886325_159887707
transcript_140392.known	chr3	+	1645	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	22.6028513442196	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	10	False	NA	16	True	AATAAA	-20	NA	159839860	159897360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_140394.known	chr3	+	765	4	FSM	ENSG00000151967.18	ENST00000472483.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	16.062378404209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGATTGATGTCTACTG	17	False	NA	NA	False	AGTAAA	-6	NA	159840098	159888119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707
transcript_140395.known	chr3	+	1000	4	FSM	ENSG00000151967.18	ENST00000495954.5	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	51.0577015629267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGAATGTTGACTAC	-14	True	NA	NA	False	NA	NA	NA	159839939	159897234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159840215_159866162_159866282_159892096_159892191_159896722
transcript_140396.nic	chr3	-	1068	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-75	2831	-75	317	multi-exon	FALSE	canonical	3	102	junction_2	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAAAGAAGAATGGAGC	NA	False	NA	3	True	NA	NA	NA	160449861	160438333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_140397.nic	chr3	-	822	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-75	3077	-75	71	multi-exon	FALSE	canonical	3	102	junction_2	11	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTAACGGCTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	160449861	160438579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_140398.known	chr3	+	2792	1	FSM	ENSG00000180044.6	ENST00000326474.5	2792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGTGTGGCTATATGG	3	True	NA	28	True	ATTAAA	-42	NA	160225421	160228213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_160225400_160228200
transcript_140399.known	chr3	-	3073	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	24.9651757454259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACCATTAATTTC	260	False	NA	-3	True	AATAAA	-19	NA	160399273	160258179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_140400.known	chr3	-	3999	20	FSM	ENSG00000068885.15	ENST00000326448.12	3999	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	27.2146489801646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	-5	True	NA	-9	True	AATAAA	-33	NA	160399225	160256985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_140405.known	chr3	+	5116	24	FSM	ENSG00000113810.16	ENST00000357388.8	5116	24	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_11	71.1868066194359	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGGAAATTCAAGTACGG	-3	True	NA	13	True	AATAAA	-17	NA	160399649	160434953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
transcript_140407.nic	chr3	+	1779	11	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-15	17009	-3	1317	5prime_fragment	FALSE	canonical	3	342	junction_2	27.7949635725611	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAAAGGAGGTAAATCT	-18	True	NA	NA	False	NA	NA	NA	160399634	160417944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722
transcript_140410.nic	chr3	+	1841	10	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-362	18601	14	-51	5prime_fragment	FALSE	canonical	3	342	junction_2	28.59206485792	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAAGGAAGTTATGGA	-3	True	NA	43	True	AAAAAG	-15	NA	160399287	160416352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250
transcript_140417.nic	chr3	+	1737	9	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-362	20438	14	0	5prime_fragment	FALSE	canonical	3	342	junction_2	29.584624384974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAGGTGTTAGAAAAAAA	-3	True	NA	NA	False	AGTAAA	-41	NA	160399287	160414515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366
transcript_140419.nic	chr3	+	1111	8	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-14	21469	-2	0	5prime_fragment	FALSE	canonical	3	342	junction_2	29.8314995826046	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACGAATTGCTGAAATGG	-17	True	NA	NA	False	NA	NA	NA	160399635	160413484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472
transcript_14042.known	chr1	+	1284	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_3	38.8978148486518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-6	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_140420.nic	chr3	+	1518	8	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-362	21410	14	-40	5prime_fragment	TRUE	canonical	3	342	junction_2	29.8314995826046	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATGAGAAGAGCAATATA	-3	True	NA	NA	False	AAGAAA	-1	NA	160399287	160413543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472
transcript_140421.nic	chr3	+	1240	8	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-14	21340	-2	30	5prime_fragment	FALSE	canonical	3	342	junction_2	29.8314995826046	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAATATTTTGGGAAGT	-17	True	NA	NA	False	AATAAA	-21	NA	160399635	160413613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472
transcript_140425.nic	chr3	+	1016	7	ISM	ENSG00000113810.16	ENST00000468653.5	1756	9	-14	2130	-2	-83	5prime_fragment	FALSE	canonical	3	342	junction_2	31.9604790674705	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAAAAACATAGCTAT	-17	True	NA	36	True	NA	NA	NA	160399635	160412370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325
transcript_140426.nic	chr3	+	1201	7	ISM	ENSG00000113810.16	ENST00000468653.5	1756	9	-116	2047	-104	0	5prime_fragment	FALSE	canonical	3	342	junction_2	31.9604790674705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCCTTGATTGATAT	226	False	NA	NA	False	AAAAAG	-24	NA	160399533	160412453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325
transcript_140436.known	chr3	-	3824	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	11	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	-5	True	NA	-1	True	AATAAA	-18	NA	160449786	160435502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_140437.known	chr3	-	577	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGTTTGTGGTC	219	False	NA	NA	False	ATTAAA	-19	NA	160449613	160438848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449444
transcript_140440.known	chr3	-	603	3	FSM	ENSG00000213186.8	ENST00000496222.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	58	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGACACACACTGGAC	21	True	NA	-46	True	AAGAAA	-30	NA	160449760	160438730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449683
transcript_140443.known	chr3	+	3998	24	FSM	ENSG00000113810.16	ENST00000469762.5	3998	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	109.361335495335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGAAACTGGTTTCTGT	-3	True	NA	18	True	TATAAA	-21	NA	160399649	160433910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_160399750_160400821_160400966_160401989_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
transcript_140444.known	chr3	-	8952	17	FSM	ENSG00000186432.10	ENST00000334256.9	8952	17	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_11	34.8146318916343	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTTCTCAGATGAACT	-2	True	NA	-16	True	AATAAA	-16	NA	160565571	160495006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160509799_160509872_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_140449.nic	chr3	-	2291	13	ISM	ENSG00000186432.10	ENST00000483437.2	1854	18	-170	11210	-38	0	5prime_fragment	FALSE	canonical	3	355	junction_7	37.6787406902088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACAAAGTAGAAGAAACAA	536	False	NA	NA	False	NA	NA	NA	160565609	160513249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_140452.nic	chr3	-	1351	12	ISM	ENSG00000186432.10	ENST00000483437.2	1854	18	-170	13420	-38	-2210	5prime_fragment	FALSE	canonical	3	355	junction_6	38.9990463964789	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAAGTAAGTACTATT	536	False	NA	NA	False	NA	NA	NA	160565609	160515459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_140454.nnic	chr3	+	2429	2	NNC	ENSG00000229320.3	novel	998	3	NA	NA	230	242	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATTGAGTCGTTATT	537	False	NA	NA	False	AATAAA	-38	NA	160565676	160569490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_160566154_160567538
transcript_140457.nic	chr3	+	2993	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	105.445636335612	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	-1	True	NA	35	True	AATAAA	-32	NA	161221267	161252307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_140458.known	chr3	+	3028	16	FSM	ENSG00000169251.13	ENST00000351193.7	3028	16	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	49.8537416404783	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	6	True	NA	35	True	AATAAA	-32	NA	161221310	161252307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_140462.nic	chr3	+	3344	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	108.640364915113	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	5	True	NA	35	True	AATAAA	-32	NA	161221309	161252307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_161221725_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_140466.known	chr3	-	3433	7	FSM	ENSG00000169255.15	ENST00000651953.1	3433	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	27.2361075698338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCGGTTTGTGTATTTA	2	True	NA	-32	True	AATAAA	-2	NA	161105305	161083912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161089943_161090063_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161105234
transcript_140467.known	chr3	-	3860	7	FSM	ENSG00000169255.15	ENST00000652111.1	3860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	27.2789092320219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGTGTATTTACTTTT	160	False	NA	-27	True	AATAAA	-7	NA	161105248	161083907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161103957_161104106_161104318_161104407_161104784
transcript_140468.known	chr3	-	584	6	FSM	ENSG00000169255.15	ENST00000460353.2	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	30.2681350598282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATGTGGTACCTCAGC	4	True	NA	NA	False	NA	NA	NA	161105303	161086663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161089943_161090063_161101138_161101234_161103426_161103515_161104318_161104407_161105234
transcript_140469.known	chr3	-	2458	6	FSM	ENSG00000169255.15	ENST00000652596.1	2458	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	29.1094486378564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCATTCTTTACATGCA	163	False	NA	NA	False	GATAAA	-9	NA	161105245	161085158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161104784
transcript_140471.known	chr3	-	3256	5	FSM	ENSG00000169255.15	ENST00000651686.1	3256	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	22.9932055181525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGTGTATTTACTTTT	-31	True	NA	-27	True	AATAAA	-7	NA	161105338	161083907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161101138_161101234_161103426_161103515_161104318_161104407_161105234
transcript_140473.known	chr3	-	1660	5	FSM	ENSG00000169255.15	ENST00000488170.5	1660	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	24.9236333627343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCACATTCTACAAAAAGC	268	False	NA	NA	False	NA	NA	NA	161105140	161085758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161104784
transcript_140476.known	chr3	-	880	4	FSM	ENSG00000196542.9	ENST00000497137.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.6999892542435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAACAGACCTACCAGAA	1525	False	NA	NA	False	AATAGA	-2	NA	161371501	161345774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161346356_161347964_161348104_161359801_161359895_161371434
transcript_140477.known	chr3	-	3103	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_1	58	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGATTTACTTTTTAT	-2	True	NA	NA	False	AATAAA	-25	NA	161372880	161344791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161346356_161359801_161359895_161371434
transcript_140478.known	chr3	-	679	2	FSM	ENSG00000196542.9	ENST00000497374.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGCATTTAATTA	-1	True	NA	NA	False	AATATA	-3	NA	161371517	161359298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161359895_161371434
transcript_140479.known	chr3	-	471	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	13	False	NA	-68	True	NA	NA	NA	161429597	161429126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161429100_161429600
transcript_1405.known	chr1	+	1531	6	FSM	ENSG00000189409.14	ENST00000512731.5	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	20.441134997842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCTCCTACCCCGGCT	-4	True	NA	NA	False	NA	NA	NA	1632177	1634474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1632375_1632782_1632914_1632980_1633121_1633187_1634100_1634201_1634329_1634450
transcript_140511.nnic	chr3	-	2379	5	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	278	junction_2	311.122463830563	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	164341493	164072875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_-_164074606_164075972_164076045_164193507_164193677_164196618_164196701_164341167
transcript_14052.known	chr1	+	5974	28	FSM	ENSG00000143515.19	ENST00000368489.6	5974	28	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_16	6.54728501098655	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTAATTTGTCTCT	-13	True	NA	19	True	TATAAA	-15	NA	154325524	154351304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154325703_154328104_154328173_154330395_154330455_154330814_154330929_154331047_154331147_154331443_154331506_154331605_154331679_154331953_154332025_154332617_154332698_154334106_154334266_154334502_154334592_154337347_154337545_154340853_154341063_154342479_154342524_154342795_154342962_154343112_154343302_154343452_154343569_154343892_154344058_154344142_154344255_154344394_154344501_154344640_154344786_154344970_154345155_154345321_154345546_154345799_154345884_154346230_154346477_154346619_154346759_154348407_154348539_154348839
transcript_140525.nnic	chr3	-	2297	4	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	278	junction_2	92.499849849728	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	164341493	164072875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_-_164074606_164075972_164076045_164193507_164193677_164341167
transcript_140527.nnic	chr3	-	2307	4	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	901	junction_3	94.9982455978355	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	164341493	164072875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341167
transcript_140528.nnic	chr3	-	2253	4	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_3	444.619937574654	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	164341493	164072875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341221
transcript_140531.nnic	chr3	-	2128	3	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	121	junction_2	191.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	164341493	164072875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_-_164074606_164075972_164076045_164341167
transcript_140532.nnic	chr3	-	2225	3	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	405	junction_2	361	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	164341493	164072875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_-_164074606_164193507_164193677_164341167
transcript_140535.nnic	chr3	-	2056	2	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	266	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	164341493	164072875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_-_164074606_164341167
transcript_140536.known	chr3	-	4937	2	FSM	ENSG00000121871.4	ENST00000475390.2	4937	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATTATATATAGAGGATA	-4	True	NA	NA	False	AATAAA	-20	NA	165196384	165186719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_165190852_165195579
transcript_140537.known	chr3	-	4391	2	FSM	ENSG00000121871.4	ENST00000241274.3	4391	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATTATATATAGAGGA	14	False	NA	NA	False	AATAAA	-18	NA	165196852	165186721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_165190852_165196591
transcript_140538.known	chr3	-	2405	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCTTTGTTTTTTAT	-2	True	NA	NA	False	ATTAAA	-18	NA	165837423	165772903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
transcript_140540.known	chr3	-	702	3	FSM	ENSG00000114200.10	ENST00000479451.5	702	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTGCTCTGCTTTTA	1	True	NA	NA	False	AATAAA	-22	NA	165837420	165773078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_165773507_165786144_165786312_165837313
transcript_140544.known	chr3	-	849	9	FSM	ENSG00000114209.15	ENST00000475915.6	849	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	565.349891660023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTTCAGACCTTCAAAA	410	False	NA	NA	False	AATAAA	-43	NA	167734510	167684338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734458
transcript_140545.known	chr3	-	1360	9	FSM	ENSG00000114209.15	ENST00000473645.6	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_8	499.640308121753	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	NA	False	NA	-13	True	AATAAA	-15	NA	167734939	167683909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734805
transcript_140546.known	chr3	-	1026	9	FSM	ENSG00000114209.15	ENST00000470131.5	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	611.442147713093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAATTTTAAAGTT	-15	True	NA	NA	False	NA	NA	NA	167734892	167684255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734213_167734346_167734805
transcript_140548.known	chr3	-	934	8	FSM	ENSG00000114209.15	ENST00000461494.5	934	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	507.66604803407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGACTGTATAAATT	-3	True	NA	NA	False	NA	NA	NA	167734544	167684241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734431
transcript_14055.known	chr1	+	5764	10	FSM	ENSG00000160712.13	ENST00000368485.8	5764	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2.40883148763098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGAAATGTAATTATTG	0	True	NA	16	True	AATAAA	-16	NA	154405342	154469450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154405715_154429195_154429445_154430482_154430607_154434518_154434701_154434989_154435157_154435968_154436111_154448124_154448172_154449910_154449981_154454487_154454582_154465133
transcript_140550.known	chr3	-	1276	8	FSM	ENSG00000114209.15	ENST00000497056.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_7	143.072123955232	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACATTTCTTTACTTG	NA	False	NA	-15	True	AATAAA	-13	NA	167734930	167683911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734805
transcript_140555.known	chr3	+	1600	9	FSM	ENSG00000163536.13	ENST00000446050.7	1600	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	6.02987354759617	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCTATTTTTTTATTT	-5	True	NA	20	True	AATAAA	-21	NA	167735720	167825569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_167735824_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_140556.known	chr3	+	1907	9	FSM	ENSG00000163536.13	ENST00000295777.9	1907	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	30.0434581065496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAGATCTATTTTTTTA	-3	True	NA	17	True	AATAAA	-18	NA	167735722	167825566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_167736136_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_140558.known	chr3	-	4310	16	FSM	ENSG00000173905.9	ENST00000470487.6	4310	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	3.87585116099964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAATCTTTTAAACTA	-1	True	NA	-19	True	AATAAA	-15	NA	168095924	168008688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
transcript_140560.nic	chr3	-	2387	13	ISM	ENSG00000173905.9	ENST00000470487.6	4310	16	-33	16315	-33	-14769	5prime_fragment	FALSE	canonical	3	10	junction_6	4.05089153424554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCCAGATGAAAATGAAG	-34	True	NA	NA	False	AAGAAA	-2	NA	168095957	168025003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
transcript_140565.nic	chr3	-	1088	2	ISM	ENSG00000173905.9	ENST00000309027.4	2100	15	-794	38083	-214	-7200	5prime_fragment	FALSE	canonical	3	16	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTTGAACATAAAAAAGCA	11	True	NA	NA	False	AAAAAG	-4	NA	168096138	168048317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_168048366_168095098
transcript_140566.known	chr3	-	438	1	FSM	ENSG00000277925.1	ENST00000363312.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGCTTTCCTGTTGGTG	8292	False	NA	-4	True	NA	NA	NA	169765047	169764609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169764600_169765000
transcript_140567.known	chr3	-	1671	2	FSM	ENSG00000184378.3	ENST00000330368.3	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATGTATGTATT	-3	True	NA	-4	True	AATAGA	-19	NA	169769561	169766920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169768351_169769320
transcript_14057.known	chr1	+	3217	9	FSM	ENSG00000160712.13	ENST00000344086.8	3217	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.29535658161602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCCCTATTAGAGAAG	15	False	NA	NA	False	AAAAAG	-19	NA	154405222	154466877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154405715_154429195_154429445_154430482_154430607_154434518_154434701_154434989_154435157_154435968_154436111_154448124_154448172_154449910_154449981_154465133
transcript_140572.known	chr3	+	2833	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	63.5865551826799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAATTTTCTAGATA	26	False	NA	0	True	AATAAA	-11	NA	169773426	169787544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_140575.known	chr3	+	4969	8	FSM	ENSG00000085274.16	ENST00000349841.10	4969	8	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_1	30.9278290903985	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCCACCTCAGCCTC	-5	True	NA	NA	False	NA	NA	NA	169773395	169789716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_140588.known	chr3	+	6526	8	FSM	ENSG00000008952.17	ENST00000337002.9	6526	8	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_4	225.725406597648	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTATTTTATGTAT	2	True	NA	8	True	AATAAA	-22	NA	169966806	169998373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593
transcript_140592.nic	chr3	+	580	5	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-34	2632	-9	0	5prime_fragment	FALSE	canonical	3	964	junction_4	255.77565853693	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGTAAGCCTATAACT	-13	True	NA	NA	False	NA	NA	NA	169966791	169983253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160
transcript_140593.nic	chr3	+	362	4	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-35	3100	-10	-72	5prime_fragment	FALSE	canonical	3	1450	junction_3	94.4539864460763	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGGAAAAGCTGAAAG	-14	True	NA	-7	True	CATAAA	-11	NA	169966790	169982785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706
transcript_140594.nic	chr3	+	518	4	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-117	3026	74	0	5prime_fragment	FALSE	canonical	3	1450	junction_3	94.4539864460763	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAGAAAA	NA	False	NA	67	True	TATAAA	-13	NA	169966708	169982859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706
transcript_140596.known	chr3	+	1962	4	FSM	ENSG00000173890.17	ENST00000355897.10	1962	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	7.1336448530109	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAAAATTGTTCTTA	-2	True	NA	5	True	ATTAAA	-18	NA	170037994	170085392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170038216_170038914_170039044_170079773_170079898_170083904
transcript_14060.known	chr1	-	3239	13	FSM	ENSG00000160714.10	ENST00000292211.5	3239	13	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	27.0774352552083	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGCTCTAATAAAATTA	24	True	NA	NA	False	AATAAA	-13	NA	154558662	154548576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
transcript_140601.known	chr3	-	12652	15	FSM	ENSG00000173889.16	ENST00000495893.7	12652	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5.84144237150311	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTATTGAATAATTTT	2	True	NA	-6	True	AATAAA	-17	NA	170181733	170087583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181701
transcript_140608.known	chr3	+	4887	18	FSM	ENSG00000163558.13	ENST00000295797.5	4887	18	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_15	79.5801700187152	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGGATCATTTTTC	-6	True	NA	54	True	AATAAA	-15	NA	170222423	170305977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170222771_170235229_170235352_170259968_170260059_170263378_170263430_170267914_170268001_170270420_170270562_170273285_170273341_170275228_170275288_170280226_170280404_170281165_170281264_170281881_170281969_170284460_170284597_170291853_170291942_170293382_170293509_170295910_170295991_170297303_170297394_170298994_170299111_170303039
transcript_14061.known	chr1	-	1514	2	FSM	ENSG00000286391.2	ENST00000666466.2	1528	2	14	0	11	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	NA	False	NA	NA	False	NA	NA	NA	154567735	154564854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154566183_154567549
transcript_14062.known	chr1	+	5857	6	FSM	ENSG00000160716.6	ENST00000368476.4	5857	6	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_4	2.0591260281974	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTGACAGTCTGCC	0	True	NA	NA	False	AAGAAA	-3	NA	154567777	154580013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154568109_154569461_154569608_154569791_154569837_154570257_154570368_154571188_154572162_154575761
transcript_140623.known	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.2997412673548	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	24	True	NA	20	True	AATAAA	-21	NA	170357714	170396835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
transcript_140628.known	chr3	+	594	2	FSM	ENSG00000136603.14	ENST00000465590.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAGAGTAAGTTACG	-6	True	NA	NA	False	GGGGCT	-11	NA	170357684	170360213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170357764_170359698
transcript_140629.known	chr3	+	599	2	FSM	ENSG00000136603.14	ENST00000490989.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	43	False	NA	NA	False	NA	NA	NA	170358508	170360160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170358646_170359698
transcript_140630.known	chr3	-	10140	8	FSM	ENSG00000013293.6	ENST00000231706.6	10140	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.87139303460597	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCCATCCTACCCCT	-7	True	NA	NA	False	AATAAA	-18	NA	170586075	170459547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170467378_170480288_170481167_170483313_170483523_170486221_170486369_170498666_170498885_170501108_170501346_170526632_170527089_170585910
transcript_140631.known	chr3	-	506	4	FSM	ENSG00000163584.18	ENST00000463836.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	563.562675209146	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTTGTCTCATTTTT	-1	True	NA	36	True	AATAAA	-15	NA	170870195	170866267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170866525_170868012_170868135_170868297_170868388_170870158
transcript_140632.known	chr3	-	587	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_2	605.991749118748	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGTCTCATTTTTT	175	False	NA	37	True	AATAAA	-16	NA	170870208	170866266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
transcript_140633.known	chr3	-	5534	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	16.2538456987877	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTTGTACATATACAT	10	True	NA	NA	False	AATAAA	-19	NA	170908637	170888417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
transcript_140636.known	chr3	-	3181	11	FSM	ENSG00000163581.14	ENST00000314251.8	3181	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.02469507659596	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGATTTGTTTTTCATTT	11	True	NA	NA	False	AAGAAA	-14	NA	171026720	170996346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170998104_170998192_170998397_170999064_170999167_171002575_171002681_171005284_171005473_171005942_171006106_171007147_171007264_171009957_171010083_171014468_171014732_171018530_171018624_171026655
transcript_140638.known	chr3	-	3996	32	FSM	ENSG00000154310.17	ENST00000357327.9	3996	32	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_12	17.2081581697825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGCACTTGGCACTT	405	False	NA	NA	False	NA	NA	NA	171460063	171063880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171107182_171107207_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
transcript_140639.known	chr3	-	3972	31	FSM	ENSG00000154310.17	ENST00000470834.5	3972	31	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	15.1202954115762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGCACTTGGCACTT	405	False	NA	NA	False	NA	NA	NA	171460063	171063880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
transcript_14064.known	chr1	-	4080	16	FSM	ENSG00000160710.18	ENST00000681683.1	4080	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	267.901424657155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTACTTCCCCTCTTTCCC	11	True	NA	NA	False	NA	NA	NA	154627963	154584364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154602384_154602627_154627854
transcript_140643.nic	chr3	-	1293	10	ISM	ENSG00000154310.17	ENST00000284483.12	4059	32	-364	103234	-19	-9564	5prime_fragment	FALSE	canonical	3	46	junction_9	14.9798218189802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGCGAGGAGAAAAAG	41	False	171460446	-14	True	NA	NA	NA	171460427	171167114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
transcript_140644.known	chr3	-	750	3	FSM	ENSG00000154310.17	ENST00000465393.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTCTCCTGTTTAAAA	-3	True	NA	-6	True	ATTAAA	-16	NA	171460405	171346933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_171347219_171369619_171369686_171460006
transcript_140646.known	chr3	+	8031	26	FSM	ENSG00000075420.13	ENST00000415807.7	8031	26	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	14.3636207134552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTGTGATTTTAGA	-15	True	NA	NA	False	AATAAA	-22	NA	172039577	172401669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329_172337402_172341112_172341232_172343010_172343117_172344085_172344259_172346326_172346441_172347211_172347362_172352802_172353084_172362632_172362846_172378269_172378437_172380965_172381094_172397163
transcript_140647.known	chr3	+	7904	26	FSM	ENSG00000075420.13	ENST00000336824.8	7904	26	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	20.870112601517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCATGGTTTTGTGATTT	26	False	NA	NA	False	AATAAA	-18	NA	172040553	172401665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172040625_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329_172337402_172341112_172341232_172343010_172343117_172344085_172344259_172346326_172346441_172347211_172347362_172352802_172353084_172362632_172362846_172378269_172378437_172380965_172381094_172397163
transcript_140649.known	chr3	+	2916	16	FSM	ENSG00000075420.13	ENST00000469491.5	2916	16	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	14.8048040251204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTCTTATAAGC	11	False	NA	NA	False	NA	NA	NA	172039658	172338324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329
transcript_14065.known	chr1	-	6610	15	FSM	ENSG00000160710.18	ENST00000368474.9	6610	15	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_14	204.329428389849	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAAGTCCTGGTTTCTT	-7	True	NA	-3	True	AATAAA	-30	NA	154608186	154582056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
transcript_140652.known	chr3	+	946	4	FSM	ENSG00000075420.13	ENST00000421757.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	56.1921307262463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTCTTCTTATTCAT	35	True	NA	NA	False	AATAAA	-27	NA	172039627	172187298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172186711
transcript_140653.nic	chr3	+	1876	3	ISM	ENSG00000075420.13	ENST00000421757.5	946	4	-59	52294	-9	-51830	5prime_fragment	FALSE	canonical	3	82	junction_1	28.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	-24	True	NA	NA	False	ATTAAA	-45	NA	172039568	172135004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_172039772_172112451_172112591_172133470
transcript_140655.known	chr3	-	921	5	FSM	ENSG00000144959.11	ENST00000424772.2	921	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.0271578793389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCTGCTGCTGTCAGG	144	False	NA	NA	False	NA	NA	NA	172711052	172633872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172647861_172648115_172710846
transcript_140656.known	chr3	-	4536	5	FSM	ENSG00000144959.11	ENST00000475381.7	4536	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	3.56195171219375	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTATGCTTAGTTTAT	13	True	NA	NA	False	AATAAA	-18	NA	172711067	172630248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172647885_172648115_172710846
transcript_14066.known	chr1	-	6519	15	FSM	ENSG00000160710.18	ENST00000368471.8	6519	15	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_14	153.589517207127	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	6	True	NA	-13	True	AATAAA	-20	NA	154627968	154582066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
transcript_140662.known	chr3	+	4136	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_18	61.0188950699335	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	-28	True	NA	19	True	AATAAA	-20	NA	172750725	172821474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_140669.known	chr3	+	4087	24	FSM	ENSG00000114346.14	ENST00000232458.9	4087	24	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	104.778982437703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	NA	False	NA	19	True	AATAAA	-20	NA	172750681	172821474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_14067.known	chr1	-	6425	15	FSM	ENSG00000160710.18	ENST00000649724.1	6425	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_14	260.340015113674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATTCCTCATAAATAA	NA	False	NA	42	True	NA	NA	NA	154628013	154582106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627953
transcript_140676.nic	chr3	+	449	4	ISM	ENSG00000114346.14	ENST00000392692.8	4136	25	-42	65949	-1	940	5prime_fragment	FALSE	canonical	3	422	junction_3	40.3099105542159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCCTGGAAAATCGGAT	NA	False	NA	NA	False	ATTAAA	-35	NA	172750683	172755525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482
transcript_140678.known	chr3	+	1827	3	FSM	ENSG00000169760.17	ENST00000401917.4	1827	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	4.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGATAAGAGAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	174275313	174281303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_174275528_174278860_174279651_174280480
transcript_14068.known	chr1	-	6343	15	FSM	ENSG00000160710.18	ENST00000529168.2	6343	15	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	272.495534507505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGACTCCAAGAGCAGA	9	True	NA	54	True	NA	NA	NA	154608170	154582229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
transcript_140681.known	chr3	-	440	1	FSM	ENSG00000214192.3	ENST00000397758.2	440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTAATCAAAAAAAAAAAAA	5	True	NA	NA	False	AAGAAA	-43	NA	175718670	175718230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_175718200_175718700
transcript_140684.known	chr3	-	2535	17	FSM	ENSG00000177565.18	ENST00000422442.6	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	92.3721244478008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCATGTTGTGGAAGGG	-6	True	NA	-124	True	NA	NA	NA	177197227	177024854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177079826_177079946_177098465_177098542_177197120
transcript_140687.known	chr3	-	8182	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	54.8940798265168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	-22	True	NA	-7	True	ATTAAA	-35	NA	177197482	177019343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
transcript_14069.nic	chr1	-	6439	15	NIC	ENSG00000160710.18	novel	6343	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	170	junction_8	240.234919040781	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCTGAATTCTTAGAAA	-2	True	NA	-23	True	AATAAA	-10	NA	154627976	154582076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
transcript_140691.known	chr3	-	7948	16	FSM	ENSG00000177565.18	ENST00000430069.5	7948	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_15	69.4439502204636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAATTACTAATGTTT	-9	True	NA	-18	True	ATTAAA	-24	NA	177196478	177019354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
transcript_140694.known	chr3	-	2454	15	FSM	ENSG00000177565.18	ENST00000352800.10	2454	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	64.5093332908708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCTCTGTTGGTTTT	1	True	NA	-35	True	AGTAAA	-5	NA	177197252	177024765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177197120
transcript_1407.nic	chr1	+	1786	6	NIC	ENSG00000189409.14	novel	1309	7	NA	NA	-69	0	intron_retention	TRUE	canonical	3	49	junction_1	19.2623986045352	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	94	False	NA	NA	False	GATAAA	-16	NA	1632093	1634654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1632375_1632782_1632914_1632980_1633913_1633988_1634100_1634201_1634329_1634450
transcript_140702.nnic	chr3	-	617	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-96	25	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860501	178748962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_178749237_178859488_178859624_178860293
transcript_140705.known	chr3	-	2944	7	FSM	ENSG00000172667.11	ENST00000432729.5	2944	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	13.4752860204648	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	18	True	NA	NA	False	NA	NA	NA	179072215	179023738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179025226_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071326_179071448_179071594
transcript_140706.known	chr3	-	8936	6	FSM	ENSG00000172667.11	ENST00000311417.7	8936	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	12.7655787177864	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGGTTATGAGTTGAA	-4	True	NA	0	True	AATAAA	-26	NA	179071809	179017222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179025229_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071594
transcript_140708.known	chr3	+	1228	7	FSM	ENSG00000121864.10	ENST00000491818.5	1228	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	54.356079083515	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTTAAAGCAGCATATG	47	True	NA	NA	False	TATAAA	-35	NA	179323075	179333613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179323292_179325041_179325323_179327560_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
transcript_140712.known	chr3	+	584	7	FSM	ENSG00000121864.10	ENST00000481587.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	125.185750875338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAATTGCTGTAGAAGTG	217	False	NA	NA	False	NA	NA	NA	179323245	179333376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179323292_179324949_179324994_179327560_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
transcript_140716.known	chr3	+	5962	6	FSM	ENSG00000121864.10	ENST00000496856.6	5962	6	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_1	64.8123445031886	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGACTTAATCCTGGC	2	True	NA	13	True	ATTAAA	-17	NA	179323030	179338583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179323292_179327560_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
transcript_140722.known	chr3	+	5212	18	FSM	ENSG00000171109.19	ENST00000471841.6	5212	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	14.5269109541056	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTAGCATTTATACTA	-6	True	NA	11	True	AATAAA	-22	NA	179347708	179394936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179347811_179348844_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
transcript_140725.known	chr3	-	6315	10	FSM	ENSG00000114450.11	ENST00000232564.8	6315	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	9.12600408816936	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTATTTTTTTATG	-31	True	NA	-3	True	AATAAA	-16	NA	179451470	179396087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426243_179451345
transcript_140730.known	chr3	+	1750	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	214.32787469161	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	NA	False	NA	13	True	AATAAA	-23	NA	179562885	179588407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_140732.known	chr3	+	1854	14	FSM	ENSG00000136518.17	ENST00000429709.7	1854	14	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_4	61.85485970107	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	-22	True	NA	13	True	AATAAA	-23	NA	179562925	179588407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179563118_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_140746.known	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	461.3595849949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-3	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
transcript_140748.known	chr3	-	1354	7	FSM	ENSG00000136522.14	ENST00000476781.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_1	120.795971235247	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGGAAAGCATTTTA	-1	True	NA	22	True	AATAAA	-40	NA	179604638	179588284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
transcript_14075.known	chr1	-	471	3	FSM	ENSG00000160710.18	ENST00000494866.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAACACCCCCTTTGTG	-1	True	NA	NA	False	NA	NA	NA	154627912	154602077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154602249_154602384_154602627_154627854
transcript_140751.known	chr3	-	673	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	500.04743774966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	4	True	NA	-2	True	ATTAAA	-24	NA	179604649	179588830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
transcript_140756.known	chr3	+	597	3	FSM	ENSG00000136518.17	ENST00000491202.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGATGCATAAGAAATG	-25	True	NA	NA	False	NA	NA	NA	179562922	179570391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179563118_179569823_179569901_179570066
transcript_140758.known	chr3	+	671	7	FSM	ENSG00000136521.13	ENST00000482604.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	445.707832803309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATATTCTGTATTT	25	False	NA	-2	True	AATAAA	-3	NA	179604825	179624091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614970_179615060_179615555_179615616_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_140759.known	chr3	+	1054	6	FSM	ENSG00000136521.13	ENST00000359944.10	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	383.39087104416	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	10	True	NA	14	True	AATAAA	-32	NA	179604810	179624500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_14076.nic	chr1	-	2714	2	ISM	ENSG00000160710.18	ENST00000529168.2	6343	15	-62	17924	-28	23	5prime_fragment	FALSE	canonical	3	288	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGATCTCCATGCAT	485	False	NA	NA	False	AAAAAG	-17	NA	154608232	154600153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_154602627_154607991
transcript_140760.known	chr3	+	729	5	FSM	ENSG00000136521.13	ENST00000480374.1	729	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	468.031248956734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAGCAACTTTGAAA	40	False	NA	150	True	AATAAA	-32	NA	179604840	179624267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179618414_179618522_179623919
transcript_140762.known	chr3	+	4046	4	FSM	ENSG00000136521.13	ENST00000493866.5	4046	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	406.276588873475	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	-10	True	NA	8	True	AATAAA	-18	NA	179604790	179627647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179616982_179617045_179618414_179618522_179623919
transcript_140764.known	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_4	355.529534638123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	-14	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
transcript_140765.known	chr3	+	8038	21	FSM	ENSG00000058056.10	ENST00000263966.8	8038	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	10.9328633029047	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGCCCTTTATGGCTC	-39	True	NA	14	True	ATTAAA	-15	NA	179653039	179789401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179653394_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179757051_179757079_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
transcript_140768.known	chr3	-	9089	15	FSM	ENSG00000114757.19	ENST00000467460.6	9089	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	4.69693777793531	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTTAGGGTCTTTT	-6	True	NA	NA	False	AATAAA	-15	NA	180036937	179794957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179802033_179807673_179807832_179808271_179808438_179809470_179809669_179811800_179811872_179815860_179816005_179819859_179819977_179859061_179859158_179874326_179874424_179875353_179875478_179879928_179880124_179887672_179887785_179898141_179898247_179971593_179971666_180036578
transcript_14077.nic	chr1	-	2595	2	ISM	ENSG00000160710.18	ENST00000368471.8	6519	15	-8	18087	0	23	5prime_fragment	FALSE	canonical	3	566	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGATCTCCATGCAT	-2	True	NA	NA	False	AAAAAG	-17	NA	154627976	154600153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_154602627_154627854
transcript_140770.known	chr3	+	3000	12	FSM	ENSG00000163728.11	ENST00000296015.9	3000	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	18.116245392118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTCCACCCAGCATAA	-31	True	NA	NA	False	ATTAAA	-20	NA	180602162	180611130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629
transcript_140772.known	chr3	+	3150	11	FSM	ENSG00000163728.11	ENST00000470669.5	3150	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	22.9008733457919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTCTGAAGATCCAAGA	17	True	NA	NA	False	NA	NA	NA	180602210	180610003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180608272_180608700
transcript_140773.known	chr3	+	4568	10	FSM	ENSG00000163728.11	ENST00000412756.6	4568	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	9.21485649627348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATGTTCGAATGTTT	-1	True	NA	6	True	ATTAAA	-19	NA	180602192	180610974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647
transcript_14078.nic	chr1	-	2465	2	ISM	ENSG00000160710.18	ENST00000529168.2	6343	15	-131	18242	11	-268	5prime_fragment	FALSE	canonical	3	288	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGTCTTGGGGGCCGG	416	False	NA	NA	False	AAAAAG	-8	NA	154608301	154600471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_154602627_154607991
transcript_140781.known	chr3	+	8343	17	FSM	ENSG00000114416.18	ENST00000357559.9	8343	17	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_15	132.809176429003	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGATCCTCATTATT	0	True	NA	NA	False	AATAAA	-18	NA	180912669	180982753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_140785.known	chr3	+	2651	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_15	92.5955122502645	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	2	True	NA	6	True	AATAAA	-16	NA	180912671	180977155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_14079.nic	chr1	-	2277	2	ISM	ENSG00000160710.18	ENST00000368471.8	6519	15	-8	18405	0	-268	5prime_fragment	FALSE	canonical	3	566	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGTCTTGGGGGCCGG	-2	True	NA	NA	False	AAAAAG	-8	NA	154627976	154600471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_154602627_154627854
transcript_140791.known	chr3	+	2130	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_14	95.8452462279157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	8	True	NA	24	True	ATTAAA	-24	NA	180912677	180976553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
transcript_140799.known	chr3	+	541	4	FSM	ENSG00000114416.18	ENST00000479176.5	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_1	46.8282915435625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATCAGATTGATGTAG	1	True	NA	NA	False	NA	NA	NA	180912670	180948192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864
transcript_14080.known	chr1	-	2477	2	FSM	ENSG00000160710.18	ENST00000680472.1	2477	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGACAGAGTGAGACTC	NA	False	NA	NA	False	NA	NA	NA	154628007	154600203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154602627_154627953
transcript_140802.known	chr3	-	520	6	FSM	ENSG00000205981.9	ENST00000643241.1	520	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	608.201808612898	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGCCTCAGAGCTA	13	True	NA	-67	True	NA	NA	NA	180989714	180984577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180986947_180987023_180988022_180988097_180988177_180988230_180989599
transcript_140806.known	chr3	-	828	6	FSM	ENSG00000205981.9	ENST00000486355.1	828	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	584.799658002636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	-42	True	NA	NA	False	GATAAA	-24	NA	180989769	180984274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180986997_180987023_180988022_180988097_180988177_180988230_180989599
transcript_140807.known	chr3	-	1239	5	FSM	ENSG00000205981.9	ENST00000469657.5	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	612.389173646955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTAATTTGGACTCTT	24	True	NA	-67	True	NA	NA	NA	180989703	180983772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180988022_180988097_180988177_180988230_180989599
transcript_140809.known	chr3	-	769	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	642.512451241219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGATGGAAATTAG	17	True	NA	NA	False	GATAAA	-21	NA	180989710	180984277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
transcript_140811.known	chr3	-	324	3	FSM	ENSG00000205981.9	ENST00000646965.1	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	738.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAGCCTTGGTATAAT	170	False	NA	-15	True	TTTAAA	-23	NA	180989667	180984525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180989599
transcript_140812.known	chr3	-	819	2	FSM	ENSG00000205981.9	ENST00000472504.1	819	2	0	0	0	0	multi-exon	FALSE	canonical	3	1598	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTCTCTGTGGTCACA	-47	True	NA	NA	False	NA	NA	NA	180989774	180987585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180988230_180989599
transcript_140813.known	chr3	+	2512	1	FSM	ENSG00000181449.4	ENST00000325404.3	2512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTGAGTCTTTCATT	-1	True	NA	20	True	AATAAA	-24	NA	181711924	181714436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_181711900_181714400
transcript_140815.known	chr3	+	7315	30	FSM	ENSG00000058063.16	ENST00000323116.10	7315	30	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_9	16.6005744639365	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTGTTCCTTTATTT	4	True	NA	14	True	AATAAA	-16	NA	182793503	182921629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_182793787_182820259_182820377_182828119_182828210_182829671_182829753_182836034_182836143_182836341_182836471_182837070_182837175_182842074_182842123_182845457_182845523_182848475_182848558_182857877_182858029_182859161_182859360_182865455_182865699_182866267_182866444_182867375_182867445_182869077_182869152_182869227_182869332_182872355_182872538_182873811_182874016_182879495_182879650_182880878_182880982_182884752_182884899_182885950_182886011_182887585_182887714_182889409_182889549_182896699_182896766_182897302_182897407_182898606_182898773_182913860_182913995_182918022
transcript_140819.known	chr3	-	3147	7	FSM	ENSG00000043093.15	ENST00000632685.1	3147	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_6	36.9207108394312	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATATGGCTGTGTGTGT	4	True	NA	78	True	GATAAA	-40	NA	182980538	182942775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980486
transcript_14082.known	chr1	-	13034	8	FSM	ENSG00000143603.19	ENST00000271915.9	13034	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.49943307086389	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTGACTGATTTCCTT	-1	True	NA	NA	False	AATAAA	-39	NA	154870281	154697454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154708273_154713463_154713534_154714875_154715004_154725915_154726027_154733002_154733145_154771974_154772394_154822088_154822185_154869031
transcript_140822.known	chr3	-	659	7	FSM	ENSG00000043093.15	ENST00000492563.1	659	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	103.582495303663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTGTAGCACTAAAGGA	5402	False	NA	-76	True	AAAAAG	-4	NA	182980520	182945103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965678_182965754_182980486
transcript_140835.known	chr3	-	2454	19	FSM	ENSG00000078070.14	ENST00000265594.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_17	24.7434365907605	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-11	True	NA	0	True	AATAAA	-28	NA	183099496	183015217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_140837.nic	chr3	-	2926	19	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_18	48.3979453191053	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	90	False	NA	0	True	AATAAA	-28	NA	183116090	183015217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183115473
transcript_140839.nic	chr3	-	2406	18	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	47.6661544886623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-1	True	NA	0	True	AATAAA	-28	NA	183099585	183015217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183094558_183094606_183099351
transcript_140842.known	chr3	-	2316	18	FSM	ENSG00000078070.14	ENST00000629669.2	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	51.2443768541442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTTCTGCCTCAA	3719	False	NA	-2	True	AATAAA	-26	NA	183099577	183015219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_14085.known	chr1	-	1002	5	FSM	ENSG00000163344.6	ENST00000368467.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_2	19.5624001594896	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGAGCTGCTTGTCTC	4	True	NA	-9	True	AATAAA	-15	NA	154936719	154924739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154925266_154926353_154926484_154929023_154929177_154932351_154932416_154936590
transcript_140856.nnic	chr3	-	3629	16	NNC	ENSG00000053524.13	novel	3090	12	NA	NA	-643	1064	at_least_one_novel_splicesite	TRUE	canonical	3	57	junction_1	12.8813387848037	63	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGGCAGACTGCCAAAT	NA	False	NA	25	True	AAGAAA	-13	NA	183429421	183275601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_183275925_183276871_183276958_183289119_183289221_183295299_183295478_183296975_183297168_183300004_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183427901
transcript_140873.known	chr3	+	4108	2	FSM	ENSG00000176597.12	ENST00000326505.4	4108	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGATGTGTATTTAAA	2	True	NA	9	True	AATAAA	-15	NA	183253252	183273385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183253473_183269497
transcript_140875.known	chr3	+	3368	2	FSM	ENSG00000176597.12	ENST00000460419.1	3368	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACGAAAAAAGAT	25	False	NA	NA	False	NA	NA	NA	183253794	183272426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183254234_183269497
transcript_140877.known	chr3	+	1490	4	FSM	ENSG00000240024.6	ENST00000471496.6	1491	4	0	1	0	0	multi-exon	FALSE	canonical	3	54	junction_1	59.84981202978	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	-7	True	NA	25	True	AATAAA	-27	NA	183447607	183456013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183447766_183452077_183452513_183454011_183454094_183455198
transcript_140882.known	chr3	+	1241	4	FSM	ENSG00000240024.6	ENST00000686765.1	1667	4	34	392	2	84	multi-exon	FALSE	canonical	3	123	junction_1	27.8567765543682	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	-12	True	NA	NA	False	NA	NA	NA	183447650	183455625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183447948_183452077_183452513_183454011_183454094_183455198
transcript_140892.known	chr3	+	7380	9	FSM	ENSG00000114796.16	ENST00000454652.6	7380	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	42.0027900858979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	-15	True	NA	5	True	AATAAA	-18	NA	183635622	183684477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183635794_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_140895.known	chr3	+	7331	8	FSM	ENSG00000114796.16	ENST00000242810.11	7331	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	24.6328136883321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	-15	True	NA	13	True	ATTAAA	-17	NA	183635622	183684519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183635794_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_140911.known	chr3	+	389	2	FSM	ENSG00000114796.16	ENST00000481126.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGTCCCCGGGGAGCC	-3	True	NA	NA	False	NA	NA	NA	183635634	183636450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183635794_183636220
transcript_140915.known	chr3	+	6526	31	FSM	ENSG00000163872.16	ENST00000305135.10	6526	31	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	16.7545681996152	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTTTCTGAGTTTGA	-19	True	NA	31	True	AATAAA	-17	NA	183697796	183812624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183697994_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754125_183754366_183756527_183756690_183758861_183758966_183761506_183761615_183762096_183762280_183772304_183772564_183773632_183773795_183775914_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183797922_183798052_183798890_183798990_183800465_183800569_183801454_183801529_183803255_183803336_183803986_183804189_183806865_183807093_183808029_183808105_183809096_183809171_183810474
transcript_140918.nic	chr3	+	3721	22	NIC	ENSG00000163872.16	novel	6526	31	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_21	36.8444668739965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATACCTTGTCTGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	183697759	183793486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_183697994_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754125_183754366_183756527_183756690_183758861_183758966_183761506_183761615_183762096_183762280_183772304_183772564_183773632_183773795_183775914_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183793115
transcript_140924.known	chr3	-	1545	11	FSM	ENSG00000175193.14	ENST00000639900.1	1545	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	418.051252838692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTGTAAGCAGATGT	-3	True	NA	-16	True	AATAAA	-9	NA	183884879	183829401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_140925.known	chr3	-	1534	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	407.258505129113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTCTCTCTTTAA	-31	True	NA	1	True	AATAAA	-26	NA	183884907	183829384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_140931.known	chr3	-	1347	10	FSM	ENSG00000175193.14	ENST00000421484.5	1347	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	324.586232336219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGATGCCAGCATC	-32	True	NA	-74	True	NA	NA	NA	183884908	183829508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_140932.known	chr3	-	1501	10	FSM	ENSG00000175193.14	ENST00000317096.9	1501	10	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_5	129.634529007943	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTGCCTGTCTTTGGA	-4	True	NA	NA	False	NA	NA	NA	183884880	183829270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_140937.known	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_4	287.433225941261	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-12	True	NA	-4	True	AATAAA	-21	NA	183884888	183829389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_140938.nic	chr3	-	1307	9	NIC	ENSG00000175193.14	novel	1534	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_2	339.371086533606	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-31	True	NA	-4	True	AATAAA	-21	NA	183884907	183829389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_183829710_183833491_183833590_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_140940.known	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	434.384293322991	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	21	True	NA	-11	True	AATAAA	-14	NA	183884855	183829396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_140950.known	chr3	-	890	3	FSM	ENSG00000180834.8	ENST00000431348.1	890	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	21	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGTTGGGAACCGAATT	-29	True	NA	NA	False	NA	NA	NA	183825594	183817061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183817386_183817993_183818112_183825146
transcript_140951.known	chr3	-	549	3	FSM	ENSG00000180834.8	ENST00000445426.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	21.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGGATTCTCAACGTGTG	44	True	NA	NA	False	NA	NA	NA	183825521	183817376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183817437_183817993_183818108_183825146
transcript_140954.known	chr3	-	5790	30	FSM	ENSG00000114770.17	ENST00000334444.11	5790	30	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_20	34.7419226448486	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCGTGTATCAAACAAT	21	True	NA	-5	True	AATAAA	-22	NA	184017884	183919933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949752_183949882_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_140960.known	chr3	-	1923	7	FSM	ENSG00000114770.17	ENST00000382494.6	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	94.935065527268	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_140961.known	chr3	-	1848	6	FSM	ENSG00000114770.17	ENST00000392579.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	92.0412950799803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183984895_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_140962.known	chr3	-	4697	5	FSM	ENSG00000114770.17	ENST00000427120.6	4697	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	18.7533330370897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	9946	False	NA	-13	True	AATAAA	-17	NA	184017863	183983752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_140963.known	chr3	+	2613	17	FSM	ENSG00000145191.15	ENST00000648599.1	2613	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	96.9953083594769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAGAGAGAGTGGTGT	11	True	NA	-6	True	NA	NA	NA	184135378	184145290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184138846_184138940_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_140965.known	chr3	+	2222	16	FSM	ENSG00000145191.15	ENST00000647909.1	2222	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.6358527566274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGATTGAGTGCCCTCCT	9	True	NA	NA	False	NA	NA	NA	184135376	184144966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137873_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_140968.known	chr3	+	2389	16	FSM	ENSG00000145191.15	ENST00000650270.1	2389	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	75.0217746168848	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAAAAGAGAGAGTGGT	151	False	NA	-8	True	NA	NA	NA	184135518	184145288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143430_184143566_184144098_184144225_184144596_184144708_184144883
transcript_14097.known	chr1	-	3207	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	15.2065775242163	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	20	True	NA	-24	True	AATAAA	-17	NA	154956099	154944079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
transcript_140971.known	chr3	+	3460	15	FSM	ENSG00000145191.15	ENST00000481054.5	3460	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	102.398879936476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTGTCTCCATCCCT	17	True	NA	15	True	ATTAAA	-16	NA	184135384	184145311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184138846_184138940_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184144225_184144596_184144708_184144883
transcript_140974.known	chr3	+	3084	15	FSM	ENSG00000145191.15	ENST00000649814.1	3084	15	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_9	76.0080889895065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCTGCTGCTTGTATA	13	False	NA	-33	True	NA	NA	NA	184135336	184145263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184144225_184144596_184144708_184144883
transcript_140976.known	chr3	+	2665	15	FSM	ENSG00000145191.15	ENST00000648682.1	2665	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	77.0117934249723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTTGGGATGTGGAA	8	True	NA	NA	False	NA	NA	NA	184135375	184145123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140741_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143566_184144098_184144225_184144596_184144708_184144883
transcript_140992.known	chr3	+	585	2	FSM	ENSG00000145191.15	ENST00000432569.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGCCAGTGGACTTT	-3	True	NA	15	True	AATAAA	-30	NA	184135364	184136980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611
transcript_140995.nnic	chr3	+	2478	16	NNC	ENSG00000161202.20	novel	5269	15	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.264524803999	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCTAACTGCTCGCAG	-61	True	NA	14	True	AATAAA	-15	NA	184155315	184170876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_184155449_184155562_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_140996.nnic	chr3	+	2545	16	NNC	ENSG00000161202.20	novel	5269	15	NA	NA	-61	67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.264524803999	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGCCTCTGGCCCCAG	-61	True	NA	20	True	NA	NA	NA	184155315	184170943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_184155449_184155562_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_1410.nic	chr1	-	975	6	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-246	6648	-246	-614	5prime_fragment	FALSE	canonical	3	16	junction_1	31.000645154577	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	NA	False	NA	NA	False	NA	NA	NA	1659258	1642385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1642509_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_141001.nnic	chr3	+	2659	15	NNC	ENSG00000161202.20	novel	5269	15	NA	NA	-61	0	intron_retention	FALSE	non_canonical	0	0	junction_1	176.564378037691	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCTAACTGCTCGCAG	-61	True	NA	14	True	AATAAA	-15	NA	184155315	184170876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_184155449_184155562_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_14101.nnic	chr1	-	3165	10	NIC	ENSG00000163346.17	novel	3207	11	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	40.3037847072504	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	-25	True	NA	-24	True	AATAAA	-17	NA	154956144	154944079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154956068
transcript_141011.known	chr3	+	2272	13	FSM	ENSG00000161202.20	ENST00000478247.1	2272	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_12	51.8916472619202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCTAACTGCTCGCAG	8160	False	NA	14	True	AATAAA	-15	NA	184163676	184170876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184163727_184164266_184164389_184164491_184164602_184164795_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_141012.known	chr3	+	2289	15	FSM	ENSG00000161202.20	ENST00000431765.6	2289	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	173.279074775641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGCGCTAACTGCTCG	48	True	NA	11	True	AATAAA	-12	NA	184155564	184170873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166876_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_141015.known	chr3	+	1931	12	FSM	ENSG00000161203.14	ENST00000292807.9	1931	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1283.10410675063	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	-28	True	NA	21	True	AATAAA	-15	NA	184174854	184184091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_141023.known	chr3	+	2091	11	FSM	ENSG00000161203.14	ENST00000382456.7	2091	11	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_4	1104.5581243194	4285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	1807	False	NA	21	True	AATAAA	-15	NA	184174688	184184091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_141069.known	chr3	+	601	7	ISM	ENSG00000161203.14	ENST00000431779.6	1906	13	0	3194	0	-393	5prime_fragment	FALSE	canonical	0	0	junction_2	1907.27787406264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGGCGGCGAGAGGG	-1	True	NA	NA	False	NA	NA	NA	184174881	184180893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184174960_184176950_184177068_184178217_184178224_184178856_184179123_184180168_184180252_184180644_184180651_184180848
transcript_14109.known	chr1	-	3144	10	FSM	ENSG00000163346.17	ENST00000368465.5	3144	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	40.3037847072504	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGTTTTGGGCACTCA	-2	True	NA	-20	True	AATAAA	-21	NA	154956121	154944075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951920_154956068
transcript_141090.known	chr3	+	2453	21	FSM	ENSG00000161204.12	ENST00000292808.5	2453	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	92.0642574509782	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCATGTCTGCT	-8	True	NA	18	True	ATTAAA	-15	NA	184186173	184194005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184186281_184186506_184186637_184186795_184186876_184187396_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_141126.known	chr3	+	2844	20	FSM	ENSG00000161204.12	ENST00000473311.5	2844	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.887189529096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGTCTGCTGCTCCCT	-6	True	NA	25	True	ATTAAA	-22	NA	184186175	184194012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184186281_184186506_184186876_184187396_184187762_184187860_184187984_184188140_184188408_184188663_184188671_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_141158.known	chr3	-	1552	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	244.169382806281	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-10	True	NA	25	True	NA	NA	NA	184248962	184242300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
transcript_141159.nic	chr3	-	1525	9	NIC	ENSG00000214160.10	novel	1552	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	282.469467376564	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-20	True	NA	25	True	NA	NA	NA	184248972	184242300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_141160.known	chr3	-	1697	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	316.944962690685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTTGGACTCTGCCC	19	True	NA	-58	True	NA	NA	NA	184249520	184242468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
transcript_141161.known	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.138891360881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-9	True	NA	-14	True	AATAAA	-14	NA	184249548	184242424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
transcript_141166.nic	chr3	-	1981	9	NIC	ENSG00000214160.10	novel	1533	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	282.469467376564	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-13	True	NA	-14	True	AATAAA	-14	NA	184249552	184242424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_141170.known	chr3	-	1452	8	FSM	ENSG00000214160.10	ENST00000411922.5	1452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	315.774331717175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-10	True	NA	25	True	NA	NA	NA	184248962	184242300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184248744
transcript_141192.known	chr3	+	3223	19	FSM	ENSG00000145194.19	ENST00000404464.8	3223	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	2.00385431076349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCTCTTCCTTCAG	-9	True	NA	NA	False	AATAAA	-18	NA	184276021	184293031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184276193_184276480_184276568_184276891_184277028_184277250_184277467_184277924_184278050_184278166_184278314_184278491_184278558_184283784_184283974_184284962_184285106_184285477_184285593_184287836_184287948_184289436_184289536_184289640_184289719_184290254_184290359_184290556_184290668_184290792_184290861_184291039_184291231_184291343_184291440_184292061
transcript_141193.known	chr3	+	2667	19	FSM	ENSG00000145194.19	ENST00000357474.9	2667	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.00385431076349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCCCCCACAGGTGA	4	True	NA	NA	False	NA	NA	NA	184276034	184292350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184276193_184276480_184276706_184276891_184277028_184277250_184277467_184277924_184278050_184278166_184278314_184278491_184278558_184283784_184283974_184284962_184285106_184285477_184285593_184287836_184287948_184289436_184289536_184289640_184289719_184290254_184290359_184290556_184290668_184290792_184290861_184291039_184291231_184291343_184291440_184292061
transcript_141195.known	chr3	+	3147	18	FSM	ENSG00000145194.19	ENST00000359140.8	3147	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	2.07306002196542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCTCTTCCTTCAG	-20	True	NA	NA	False	AATAAA	-18	NA	184276010	184293031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184276193_184276891_184277028_184277250_184277467_184277924_184278050_184278166_184278314_184278491_184278558_184283784_184283974_184284962_184285106_184285477_184285593_184287836_184287948_184289436_184289536_184289640_184289719_184290254_184290359_184290556_184290668_184290792_184290861_184291039_184291231_184291343_184291440_184292061
transcript_141198.known	chr3	+	975	3	FSM	ENSG00000284753.2	ENST00000324557.9	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	2	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGTTTCTTGCTTCTT	6	True	NA	14	True	AATACA	-24	NA	184249671	184258759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184249891_184257472_184257757_184258287
transcript_141201.known	chr3	+	2913	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	0	0	0	0	multi-exon	FALSE	canonical	3	2671	junction_8	281.674541803124	2904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	-1	True	NA	24	True	AATAAA	-16	NA	184299240	184309050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
transcript_141237.known	chr3	+	581	3	FSM	ENSG00000175166.17	ENST00000492191.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	3698	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTTTCATTAGCATG	9	True	NA	NA	False	NA	NA	NA	184299250	184300652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184299402_184299850_184299908_184300279
transcript_141248.known	chr3	+	5569	33	FSM	ENSG00000114867.22	ENST00000414031.5	5569	33	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	443.070147125077	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	184314501	184335353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316071_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141250.known	chr3	+	5042	33	FSM	ENSG00000114867.22	ENST00000435046.7	5042	33	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	462.203650833429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTGTCTGAACTAAT	-10	True	NA	-22	True	NA	NA	NA	184314566	184335017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317432_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141257.nic	chr3	+	5528	33	NIC	ENSG00000114867.22	novel	5405	33	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	643	junction_14	375.862278166402	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	184314485	184335353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141263.known	chr3	+	5405	33	FSM	ENSG00000114867.22	ENST00000346169.7	5405	33	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_14	315.943601573129	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	29	True	NA	23	True	ATTAAA	-16	NA	184314605	184335353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141272.known	chr3	+	5484	33	FSM	ENSG00000114867.22	ENST00000352767.7	5484	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	639.701025748552	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTCTGCTTTATGC	NA	False	NA	27	True	ATTAAA	-20	NA	184314494	184335357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315762_184315857_184316131_184316219_184316712_184316734_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141309.known	chr3	+	5229	30	FSM	ENSG00000114867.22	ENST00000392537.6	5229	30	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	454.071194007185	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCACTGCCTTTCTGCT	-35	True	NA	21	True	ATTAAA	-14	NA	184314541	184335351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141310.known	chr3	+	5038	30	FSM	ENSG00000114867.22	ENST00000427845.5	5038	30	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	514.516650912862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGGTGGGGCCGGGGAC	-12	True	NA	NA	False	NA	NA	NA	184315163	184334908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184315546_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141315.known	chr3	+	5129	29	FSM	ENSG00000114867.22	ENST00000442406.5	5129	29	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	590.760383198757	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	-26	True	NA	23	True	ATTAAA	-16	NA	184314550	184335353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320842_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141318.known	chr3	+	4990	29	FSM	ENSG00000114867.22	ENST00000350481.9	4990	29	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	469.222569952748	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	29	True	NA	23	True	ATTAAA	-16	NA	184314605	184335353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141342.nic	chr3	+	3170	19	NIC	ENSG00000114867.22	novel	5405	33	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	643	junction_14	289.641013440201	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	184314485	184325299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_141343.nic	chr3	+	3167	19	ISM	ENSG00000114867.22	ENST00000346169.7	5405	33	-120	10054	-9	0	5prime_fragment	FALSE	canonical	3	1336	junction_14	164.926246142531	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	184314485	184325299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_141353.known	chr3	+	2907	18	FSM	ENSG00000114867.22	ENST00000426123.5	2907	18	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_4	437.35266031084	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	-8	True	NA	NA	False	NA	NA	NA	184314568	184325299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_14137.known	chr1	-	3059	13	FSM	ENSG00000160691.19	ENST00000368450.5	3059	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	293.221036743425	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	6	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_1414.nic	chr1	+	1850	5	NIC	ENSG00000189409.14	novel	1309	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	49	junction_1	17.832554500127	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCCTCGCTCATTC	18	False	NA	NA	False	GATAAA	-13	NA	1632148	1634651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1632375_1632782_1632914_1632980_1633913_1633988_1634100_1634201
transcript_141404.known	chr3	+	5129	34	FSM	ENSG00000114867.22	ENST00000382330.7	5129	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	555.681069384553	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTGTCTGAACTAAT	-10	True	NA	-22	True	NA	NA	NA	184314566	184335017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184316712_184316734_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141405.known	chr3	+	5667	32	FSM	ENSG00000114867.22	ENST00000342981.8	5667	32	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_13	379.746528092536	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCTGCTTTATGCC	-10	True	NA	28	True	ATTAAA	-21	NA	184315165	184335358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_141406.known	chr3	+	2755	17	FSM	ENSG00000114867.22	ENST00000421110.5	2755	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	701.775646908433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAGCAAAAAGAGATG	-15	True	NA	23	True	NA	NA	NA	184314561	184324312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315762_184315857_184316131_184316219_184316712_184316734_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200
transcript_141407.known	chr3	-	3187	24	FSM	ENSG00000114859.16	ENST00000344937.11	3187	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	13.9071998597672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTTGTGCCCGTTGGC	1	True	NA	-1	True	AATAAA	-25	NA	184361602	184346187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184346801_184346934_184347022_184352012_184352118_184352292_184352332_184352442_184352497_184352736_184352811_184353032_184353148_184353249_184353423_184353661_184353796_184354100_184354315_184354547_184354608_184354903_184354974_184355373_184355530_184355693_184355779_184356992_184357095_184357181_184357267_184357361_184357488_184357619_184357699_184357778_184357857_184357961_184358096_184358181_184358311_184358681_184358814_184358974_184359132_184361416
transcript_141408.known	chr3	-	3244	24	FSM	ENSG00000114859.16	ENST00000265593.9	3244	24	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_19	10.9325133785085	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGCCCGTTGGCTCT	-2	True	NA	2	True	AATAAA	-28	NA	184361605	184346184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184346801_184346934_184347022_184352012_184352118_184352292_184352332_184352442_184352497_184352736_184352811_184353032_184353148_184353249_184353423_184353661_184353796_184354100_184354315_184354547_184354659_184354903_184354974_184355373_184355530_184355693_184355779_184356992_184357095_184357181_184357267_184357361_184357488_184357619_184357699_184357778_184357857_184357961_184358096_184358181_184358311_184358681_184358814_184358974_184359132_184361416
transcript_141423.known	chr3	+	1335	7	FSM	ENSG00000175182.15	ENST00000450976.5	1335	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	35.0115060452354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGGGCTCAAGGCT	-20	True	NA	NA	False	NA	NA	NA	184335925	184345033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184336124_184337310_184337372_184338386_184338530_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_141428.known	chr3	+	2421	6	FSM	ENSG00000175182.15	ENST00000340957.9	2421	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	18.5321342537766	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	-9	True	NA	23	True	ATTAAA	-27	NA	184335936	184346273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_141432.nic	chr3	+	2407	5	NIC	ENSG00000175182.15	novel	2421	6	NA	NA	-36	0	intron_retention	FALSE	canonical	3	18	junction_1	32.0731585597677	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	571	False	NA	23	True	ATTAAA	-27	NA	184335889	184346273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184336124_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_141433.nic	chr3	+	960	5	ISM	ENSG00000175182.15	ENST00000340957.9	2421	6	-39	3134	-28	0	5prime_fragment	FALSE	canonical	3	45	junction_2	19.7151591421424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCGAAAGACCTCAAG	579	False	NA	NA	False	NA	NA	NA	184335897	184343139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743
transcript_141438.known	chr3	+	523	2	FSM	ENSG00000175182.15	ENST00000487702.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCGAAAGACCTCAAG	1782	False	NA	NA	False	NA	NA	NA	184342121	184343139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184342249_184342743
transcript_141442.known	chr3	+	1802	6	FSM	ENSG00000163882.10	ENST00000456318.6	1807	6	8	-3	-5	1	multi-exon	FALSE	canonical	3	34	junction_1	290.389118253422	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGTGTATTGTTTC	-33	True	NA	16	True	AAAAAG	-32	NA	184361717	184368594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184362147_184362872_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_141460.known	chr3	+	994	5	FSM	ENSG00000163882.10	ENST00000438240.5	994	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	329.956815356192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAAGTCCATTT	38	True	NA	-28	True	ATTAAA	-28	NA	184361788	184368550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184362147_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_141465.known	chr3	+	791	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	314.640270785543	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGACTGCCCCTCCCCTTT	-1	True	NA	16	True	ATTAAA	-11	NA	184363402	184368533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_141466.known	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	307.53079114131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	3	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
transcript_141469.known	chr3	+	4234	16	FSM	ENSG00000182580.3	ENST00000330394.3	4234	16	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	11.3305879027622	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGCCCCTTCTTATT	-2	True	NA	4	True	AATAAA	-14	NA	184561784	184582408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184562354_184571317_184571383_184572503_184573177_184575829_184575986_184576841_184577184_184577342_184577468_184577657_184577818_184577897_184578007_184578413_184578467_184579476_184579600_184579686_184579935_184580401_184580618_184580728_184580879_184580971_184581166_184581252_184581409_184581513
transcript_141470.known	chr3	-	1701	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTGTGATGCAC	29	False	184712093	-5	True	AATAAA	-19	NA	184712064	184710363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184710400_184712100
transcript_141473.known	chr3	+	5011	47	FSM	ENSG00000156931.16	ENST00000436792.6	5011	47	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_19	18.4956567731643	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGCTGGCTCTCA	-11	True	NA	27	True	AATAAA	-27	NA	184812170	185052612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_141476.known	chr3	+	4721	45	FSM	ENSG00000156931.16	ENST00000446204.6	4721	45	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	34.7046794067785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTCTCCTGGCTGGCT	1	True	NA	19	True	AATAAA	-19	NA	184812182	185052604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_141479.known	chr3	+	477	2	FSM	ENSG00000156931.16	ENST00000485024.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGATATTTGTAGACTT	14	True	NA	5	True	AATAAA	-18	NA	184812195	184816230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184812226_184815783
transcript_141480.known	chr3	+	5047	47	FSM	ENSG00000156931.16	ENST00000287546.8	5047	47	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	34.2562621046684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGCTGGCTCTCAGT	-6	True	NA	29	True	AATAAA	-29	NA	184812142	185052614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839759_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_141481.known	chr3	-	7159	2	FSM	ENSG00000187068.3	ENST00000335012.3	7159	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATTACAATTCAGTCA	-37	True	NA	NA	False	AATAAA	-19	NA	185153060	185076837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185083564_185152627
transcript_141486.known	chr3	-	3801	7	FSM	ENSG00000113790.11	ENST00000231887.8	3801	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	4.05859855396197	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAAGTGACTT	-7	True	NA	0	True	AATAAA	-22	NA	185254049	185190623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253948
transcript_141492.known	chr3	+	1681	3	FSM	ENSG00000073803.14	ENST00000448876.5	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	34	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCACTTGCTGTTCTTTC	NA	False	NA	18	True	AATAAA	-24	NA	185282940	185293079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_185283028_185285516_185285644_185291612
transcript_141496.known	chr3	+	526	3	FSM	ENSG00000073803.14	ENST00000454237.1	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	151.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTGTTCTGTGGCC	48	False	NA	127	True	NA	NA	NA	185283025	185291917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_185283120_185285516_185285644_185291612
transcript_141498.known	chr3	-	2805	5	FSM	ENSG00000163900.11	ENST00000421852.6	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	16.7779617355625	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGCTTGTTTGAAC	-3	True	NA	-17	True	AATAAA	-16	NA	185499035	185489600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185491758_185494622_185494762_185495153_185495316_185496827_185496982_185498842
transcript_141500.known	chr3	-	1060	3	FSM	ENSG00000163900.11	ENST00000296254.3	1060	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	49.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAAAGAAAATGCT	8	True	NA	NA	False	NA	NA	NA	185498987	185490996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185491758_185496827_185496982_185498842
transcript_141504.known	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	43.3777016449696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	-9	True	NA	8	True	AATAAA	-18	NA	185586294	185633551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_141509.nic	chr3	+	3296	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-48	696	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	31.6955734291084	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	NA	False	NA	29	True	AATAAA	-26	NA	185582447	185631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_141514.nic	chr3	+	3098	17	NIC	ENSG00000163904.13	novel	5596	17	NA	NA	11	696	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	63.4340208405553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	5	True	NA	29	True	AATAAA	-26	NA	185586308	185631101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_185586515_185590113_185590170_185598411_185598546_185598991_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_14152.known	chr1	-	3062	13	FSM	ENSG00000160691.19	ENST00000368453.8	3062	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	256.930100200208	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	6	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_141527.known	chr3	-	4283	16	FSM	ENSG00000073792.16	ENST00000382199.7	4283	16	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_6	136.318678919003	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCTCACTGCATGTGA	-1	True	NA	-1	True	AATAAA	-18	NA	185825042	185643129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_141533.known	chr3	-	3291	15	FSM	ENSG00000073792.16	ENST00000346192.7	3291	15	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	169.118920241567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	293	False	185825041	17	True	TTTAAA	-10	NA	185825024	185643974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_141545.known	chr3	-	3426	16	FSM	ENSG00000073792.16	ENST00000457616.6	3426	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	226.615347131556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-13	True	NA	17	True	TTTAAA	-10	NA	185825012	185643974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692781_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_141546.known	chr3	-	1697	10	FSM	ENSG00000136527.19	ENST00000456380.5	1697	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	470.048014358607	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAACATAT	-9	True	NA	-39	True	AATAAA	-13	NA	185938029	185917329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185937824
transcript_141551.known	chr3	-	4178	9	FSM	ENSG00000136527.19	ENST00000453386.7	4178	9	0	0	0	0	multi-exon	TRUE	canonical	3	965	junction_8	113.562138827164	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATTGGTTCTATTCC	6	True	NA	NA	False	AATATA	-29	NA	185938014	185914557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185937824
transcript_141555.known	chr3	-	976	8	FSM	ENSG00000136527.19	ENST00000382191.4	976	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	409.810658121777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAAGACTTTCTGAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	185938103	185917714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185937824
transcript_141563.known	chr3	-	288	2	FSM	ENSG00000136527.19	ENST00000480461.1	538	2	11	239	1	-239	multi-exon	FALSE	canonical	3	103	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGAATGCATGCT	7	True	NA	13	True	NA	NA	NA	185938013	185931753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185931853_185937824
transcript_141565.known	chr3	-	2213	13	FSM	ENSG00000244405.8	ENST00000434744.5	2213	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	41.5036812289652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCTGATTTGCACAATT	419	False	NA	NA	False	ACTAAA	-16	NA	186108675	186048251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108456
transcript_141566.known	chr3	-	4082	13	FSM	ENSG00000244405.8	ENST00000306376.10	4082	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	20.4142855754385	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAACCTGCCTCTTTCTT	5	True	NA	-4	True	AATAAA	-27	NA	186109089	186046313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_141571.known	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	46.4990322479942	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	13	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_141578.known	chr3	+	1640	10	FSM	ENSG00000090520.12	ENST00000265028.8	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_4	60.7965642304088	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	14	True	NA	31	True	AATACA	-17	NA	186570719	186585793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186581370_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
transcript_141585.known	chr3	-	2700	8	FSM	ENSG00000113838.13	ENST00000338733.10	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	17.5650394888511	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCTTTTTTTGTAAA	-18	True	NA	NA	False	AATAAA	-15	NA	186567339	186546066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186567266
transcript_141587.known	chr3	-	3058	8	FSM	ENSG00000113838.13	ENST00000424280.5	3058	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	68.2597081381252	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAATTTCCTTTTTT	127	False	NA	NA	False	AATAAA	-9	NA	186570543	186546072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186570106
transcript_141591.known	chr3	+	1977	12	FSM	ENSG00000156976.17	ENST00000425053.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_11	564.882844578567	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	-2	True	NA	14	True	AATAAA	-3	NA	186783576	186789881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
transcript_141593.nic	chr3	+	1999	12	NIC	ENSG00000156976.17	novel	1977	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	278	junction_11	533.959728570926	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-4	True	NA	30	True	AATAAA	-19	NA	186783574	186789897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788421_186789124
transcript_1416.nic	chr1	+	1827	5	NIC	ENSG00000189409.14	novel	1309	7	NA	NA	-34	0	intron_retention	FALSE	canonical	3	49	junction_1	19.7405040462497	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	-2	True	NA	NA	False	GATAAA	-16	NA	1632128	1634654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1632375_1632782_1632914_1632980_1634100_1634201_1634329_1634450
transcript_141601.known	chr3	+	1889	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	409.603222643572	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-2	True	NA	30	True	AATAAA	-19	NA	186783576	186789897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_141608.nic	chr3	+	1837	11	NIC	ENSG00000156976.17	novel	1977	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_10	657.151276343583	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	-2	True	NA	14	True	AATAAA	-3	NA	186783576	186789881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_186783640_186784431_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
transcript_141610.nic	chr3	+	1857	11	NIC	ENSG00000156976.17	novel	1886	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	278	junction_10	630.181275507294	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-2	True	NA	30	True	AATAAA	-19	NA	186783576	186789897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_186783640_186784431_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788421_186789124
transcript_141612.known	chr3	-	1365	11	FSM	ENSG00000163918.12	ENST00000296273.7	1365	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_10	108.391189678866	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTAAAGTGAATATACAA	-3	True	NA	-41	True	AATAAA	-20	NA	186806482	186789899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_141613.known	chr3	-	1448	11	FSM	ENSG00000163918.12	ENST00000392481.6	1448	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	165.023755865633	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAATATACAATTTAT	NA	False	NA	-36	True	AATAAA	-25	NA	186806695	186789894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_141621.known	chr3	+	1729	10	FSM	ENSG00000156976.17	ENST00000443963.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	547.000710948147	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	18	False	NA	30	True	AATAAA	-19	NA	186783596	186789897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_141649.known	chr3	-	701	7	FSM	ENSG00000163918.12	ENST00000418288.5	701	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	206.066332362502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGAAGGAAAATGTCAAA	8	True	NA	NA	False	GATAAA	-29	NA	186806471	186792521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_141651.nic	chr3	-	3450	2	ISM	ENSG00000232233.1	ENST00000419745.1	1832	4	-2048	12420	-2048	-12420	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTGGCATGGTGGCGG	NA	False	NA	NA	False	AATACA	-5	NA	186827569	186823299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_186823622_186824441
transcript_141656.known	chr3	+	4604	8	FSM	ENSG00000073849.16	ENST00000169298.8	4604	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	28.3037460562436	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	-27	True	NA	27	True	AATAAA	-20	NA	186930525	187078553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_141658.known	chr3	+	3947	7	FSM	ENSG00000073849.16	ENST00000457772.6	3947	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	95.8171000743952	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	-27	True	NA	27	True	AATAAA	-20	NA	186930525	187078553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_141669.known	chr3	-	749	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	184.588431080848	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	NA	False	NA	-16	True	AATAAA	-26	NA	187180908	187120947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
transcript_141671.nnic	chr3	-	1311	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-9	-20039	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	138.516745878933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATGTGAAATGCTTG	NA	False	NA	-14	True	AATAAA	-10	NA	187180917	187140986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187141172_187142295_187143109_187173615_187173676_187180664
transcript_141673.known	chr3	-	729	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_2	35.5	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-4	True	NA	-16	True	AATAAA	-26	NA	187139496	187120947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187121329_187127998_187128063_187139212
transcript_141677.nnic	chr3	-	448	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-9	-50623	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	111.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTTGTACCAGATTT	NA	False	NA	-1	True	AATAAA	-21	NA	187180917	187171570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187171706_187173615_187173676_187180664
transcript_141680.known	chr3	-	653	2	FSM	ENSG00000163923.10	ENST00000455270.5	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	8	True	NA	-16	True	AATAAA	-26	NA	187139484	187120947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187121329_187139212
transcript_141683.nnic	chr3	+	2051	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19545	-993	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	6	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAACTACTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	187177940	187200469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_187178875_187197589_187197788_187199550
transcript_141684.known	chr3	-	3894	11	FSM	ENSG00000127241.18	ENST00000296280.11	3894	11	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	2.89136645896019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTTATGGGTTTTG	529	False	187291750	0	True	AATAAA	-20	NA	187291737	187234081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187236568_187241480_187241556_187243483_187243622_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_141686.known	chr3	-	3900	10	FSM	ENSG00000127241.18	ENST00000392472.6	3900	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	3.62433476228891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTGGCTTATGGGTTT	1	True	NA	-2	True	AATAAA	-18	NA	187291977	187234083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187236568_187241480_187241556_187243483_187243622_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187291627
transcript_141694.known	chr3	-	3477	15	FSM	ENSG00000090530.10	ENST00000319332.10	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	73.5535345784252	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCATTTATTTTTGT	1	True	NA	-14	True	AATAAA	-17	NA	190120897	189956727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190120251
transcript_141695.known	chr3	-	2963	15	FSM	ENSG00000090530.10	ENST00000427335.6	2963	15	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_14	238.896324964686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCATCTGCTTATATTTT	0	True	NA	-15	True	AATAAA	-18	NA	190122437	189956830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190122202
transcript_141712.known	chr3	-	3446	4	FSM	ENSG00000163347.6	ENST00000295522.4	3446	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2.44948974278318	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATTGGCTTGTTTTCT	-2	True	NA	-4	True	AATAAA	-22	NA	190322446	190305706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_190308440_190310168_190310254_190312871_190313037_190321983
transcript_141714.known	chr3	+	4697	11	FSM	ENSG00000196083.10	ENST00000072516.7	4697	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	5.51361950083609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCATGTGTTTTATG	87	False	NA	NA	False	AATAAA	-27	NA	190514050	190651519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349_190629499_190644247_190644398_190645698_190645843_190648337
transcript_141715.known	chr3	+	1957	8	FSM	ENSG00000196083.10	ENST00000422940.5	1957	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.16496563917521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	19	False	NA	NA	False	AATAAA	-43	NA	190514101	190630285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_141716.known	chr3	+	8629	12	FSM	ENSG00000152492.15	ENST00000392455.9	8629	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	96.9783992307327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGTTGGAGAAGTAGCT	7	True	NA	2	True	AATAAA	-15	NA	191329393	191398659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191375061_191375590_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_141718.known	chr3	+	1926	11	FSM	ENSG00000152492.15	ENST00000392456.4	1926	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	28.1440935188895	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	38	False	NA	20	True	AATAAA	-27	NA	191329084	191392175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_141722.known	chr3	-	3058	5	FSM	ENSG00000114279.15	ENST00000454309.6	3058	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	16.8874953737966	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAACACAAAA	1199	False	NA	NA	False	NA	NA	NA	192409049	192142508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192408024
transcript_141731.known	chr3	-	3063	2	FSM	ENSG00000180611.7	ENST00000392452.3	3063	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTTGTAATC	3	True	NA	0	True	AATAAA	-25	NA	192917856	192796814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_192799651_192917629
transcript_141735.known	chr3	+	969	4	FSM	ENSG00000127252.7	ENST00000264735.4	969	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.49691252107735	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	-11	True	NA	10	True	AATAAA	-22	NA	193241221	193270855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193241534_193255650_193255790_193262969_193263236_193270603
transcript_141736.known	chr3	+	6429	31	FSM	ENSG00000198836.11	ENST00000361510.8	6429	31	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	107.024197679258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-15	True	NA	17	True	TATAAA	-19	NA	193593207	193697811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_141740.known	chr3	+	4087	30	FSM	ENSG00000198836.11	ENST00000392437.6	4087	30	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	115.486820492605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGACATTCAAGCAAAG	-3	True	NA	8	True	AATAAA	-16	NA	193593279	193695652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_141741.known	chr3	+	6397	30	FSM	ENSG00000198836.11	ENST00000361908.8	6397	30	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	62.6130558919877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-37	True	NA	17	True	TATAAA	-19	NA	193593185	193697811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_141748.known	chr3	+	5008	30	FSM	ENSG00000198836.11	ENST00000645553.1	5008	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	133.037959590612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAGTAAACCCTGTGTC	4	True	NA	NA	False	AATAAA	-9	NA	193593286	193696619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193631754_193631770_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_141750.known	chr3	+	6328	29	FSM	ENSG00000198836.11	ENST00000361828.7	6328	29	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	74.8616410862228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	6	True	NA	17	True	TATAAA	-19	NA	193593143	193697811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_141753.known	chr3	+	6330	29	FSM	ENSG00000198836.11	ENST00000361150.6	6330	29	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	99.7820264683097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTGCCAAGGCTGTC	6	True	NA	16	True	TATAAA	-18	NA	193593143	193697810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_141758.known	chr3	+	1575	4	FSM	ENSG00000114315.4	ENST00000232424.4	1575	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	6.0184900284226	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTTTTCACCAATCCT	1	True	NA	NA	False	ATTAAA	-21	NA	194136147	194138732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194136489_194136616_194136713_194136960_194137049_194137682
transcript_141759.known	chr3	-	3283	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.0141247721871	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTCTGGTATTTCT	15	True	NA	NA	False	ATTAAA	-18	NA	194672191	194640790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_141769.nic	chr3	-	1840	13	ISM	ENSG00000041802.11	ENST00000265245.10	3283	14	-42	3810	-42	65	5prime_fragment	FALSE	canonical	0	0	junction_3	73.9103717725432	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTTGACAAAACTTTTT	-27	True	NA	NA	False	AATAAA	-43	NA	194672233	194644600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_141775.known	chr3	-	2197	10	FSM	ENSG00000145014.18	ENST00000381975.7	2197	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.1597846291683	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCACTGTGGAGTGCA	445	False	NA	-7	True	AATAAA	-17	NA	194633281	194587680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_194588640_194604286_194604442_194610915_194611021_194615568_194615698_194617098_194617270_194623223_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633078
transcript_141782.known	chr3	+	1101	4	FSM	ENSG00000231770.7	ENST00000447982.7	1125	4	23	1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	7	True	NA	NA	False	AATAAA	-20	NA	194584013	194590249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194584449_194589024_194589143_194589473_194589627_194589854
transcript_141783.known	chr3	+	1119	4	FSM	ENSG00000231770.7	ENST00000453671.5	1119	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGAATCGAGTACTAAT	4	True	NA	NA	False	AATAAA	-31	NA	194584010	194590260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194584449_194589020_194589143_194589473_194589627_194589854
transcript_141784.known	chr3	+	663	3	FSM	ENSG00000231770.7	ENST00000419571.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	262	False	NA	NA	False	AATAAA	-20	NA	194584298	194590249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194584449_194589024_194589143_194589854
transcript_141786.known	chr3	+	972	2	FSM	ENSG00000229334.1	ENST00000447139.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGGGCCCTGTAATGC	-4	True	NA	NA	False	AATAAA	-23	NA	194632922	194645401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194633168_194644674
transcript_141788.known	chr3	+	905	1	FSM	ENSG00000231770.7	ENST00000666676.1	905	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAATTTGTTTTTAT	-3	True	NA	NA	False	AATGAA	-17	NA	194584003	194584908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194584000_194584900
transcript_141789.known	chr3	+	3155	1	FSM	ENSG00000185112.6	ENST00000329759.6	3155	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGCGTCTGGAACTG	0	True	NA	90	True	AATAAA	-19	NA	194685882	194689037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194685900_194689000
transcript_141797.known	chr3	-	2714	4	FSM	ENSG00000173950.16	ENST00000310380.11	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	8.17856276425687	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATTCATGTTGTTT	0	True	NA	-8	True	AATAAA	-14	NA	195271159	195068283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195070112_195156448_195156582_195226708_195226857_195270554
transcript_141806.nic	chr3	-	1826	3	ISM	ENSG00000173950.16	ENST00000310380.11	2714	4	-26	87251	-26	20120	5prime_fragment	FALSE	canonical	3	139	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAACAGCTGAAGCG	NA	False	NA	NA	False	ATTAAA	-12	NA	195271185	195155534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195156582_195226708_195226857_195270554
transcript_141811.known	chr3	-	7093	23	FSM	ENSG00000114331.16	ENST00000326793.11	7093	23	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	25.2365666745828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTCATGGTGATTTAC	-8	True	NA	-14	True	AATAAA	-19	NA	195443020	195274744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195279429_195285795_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718_195294812_195295707_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_141821.nic	chr3	-	2458	9	ISM	ENSG00000114331.16	ENST00000635383.1	1647	18	-238	29655	-47	917	5prime_fragment	FALSE	canonical	3	153	junction_4	15.335824073065	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTCCACTAAAAACTAAG	-6	True	NA	NA	False	NA	NA	NA	195443091	195325414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_141824.nic	chr3	-	637	6	ISM	ENSG00000114331.16	ENST00000480906.5	1802	7	-48	6707	-47	0	5prime_fragment	FALSE	canonical	3	153	junction_1	15.3049011757672	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGAAAATGCGTT	-6	True	NA	12	True	AAAAAG	-6	NA	195443091	195342605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_141826.known	chr3	-	3386	6	FSM	ENSG00000184203.8	ENST00000618156.5	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	30.7805133160576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCCTGTGTGTGGATT	-3	True	NA	-6	True	AATAAA	-15	NA	195543325	195514427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195524818_195524897_195529793_195529902_195542903
transcript_141828.nic	chr3	-	730	4	ISM	ENSG00000184203.8	ENST00000618156.5	3386	6	-28	9265	0	4197	5prime_fragment	FALSE	canonical	3	358	junction_3	17.7200451466693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTATTTCCTTTACT	-5	True	NA	NA	False	AAGAAA	-42	NA	195543353	195523692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195523787_195524818_195524897_195529793_195529902_195542903
transcript_141832.known	chr3	+	2001	15	FSM	ENSG00000215837.7	ENST00000455183.1	2001	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_14	32.3605327773301	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACAAGATGTGGTGATG	28	False	NA	NA	False	NA	NA	NA	195658095	195685904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195685817
transcript_141836.known	chr3	+	2131	14	FSM	ENSG00000242086.8	ENST00000429897.5	2131	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	27.4482838083489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	-3	True	NA	NA	False	AATAAA	-11	NA	195658064	195688862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_141849.known	chr3	+	1279	6	FSM	ENSG00000242086.8	ENST00000457233.5	1279	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	35.3021245819568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAATCAGCAAAACT	-6	True	NA	NA	False	TTTAAA	-26	NA	195658061	195666682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065
transcript_141854.known	chr3	-	4070	16	FSM	ENSG00000061938.21	ENST00000672887.2	4070	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	12.4835892274618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTGTGCCTGCCTGTT	1680	False	NA	-3	True	AATAAA	-22	NA	195908551	195863363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195864188_195866888_195867017_195867168_195867265_195867360_195868710_195869496_195869542_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425_195888607_195908484
transcript_141858.nic	chr3	-	4012	15	NIC	ENSG00000061938.21	novel	4276	15	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_14	11.871119129541	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACTTGTGCCTGCCTGT	-13	True	NA	-4	True	AATAAA	-21	NA	195895949	195863364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_195864188_195866888_195867017_195867168_195867265_195867360_195868710_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425_195888607_195895894
transcript_141859.known	chr3	-	4238	15	FSM	ENSG00000061938.21	ENST00000673420.1	4238	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	11.3874259333598	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTGTGCCTGCCTGTT	1467	False	NA	-3	True	AATAAA	-22	NA	195908764	195863363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195864188_195866888_195867017_195867168_195867265_195867360_195868710_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425_195888607_195908484
transcript_141865.nic	chr3	-	2134	14	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	23.0866646105547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	NA	False	NA	-15	True	AATAAA	-16	NA	195990305	195963103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_141875.known	chr3	-	548	5	FSM	ENSG00000185485.14	ENST00000435731.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	17.6988700204279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTGTGGAGTATTT	NA	False	NA	NA	False	NA	NA	NA	195990305	195982292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_141879.known	chr3	-	5032	19	FSM	ENSG00000072274.13	ENST00000392396.7	5032	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_18	137.514095798249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATGAGTTCTGTCAT	1	True	NA	NA	False	NA	NA	NA	196082090	196049475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196081830
transcript_141880.known	chr3	-	5012	19	FSM	ENSG00000072274.13	ENST00000360110.9	5012	19	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_14	45.1313583461969	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	1	True	NA	-6	True	AATAAA	-16	NA	196082090	196049283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196082042
transcript_141882.known	chr3	-	4814	18	FSM	ENSG00000072274.13	ENST00000420415.5	4814	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	139.613703335917	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-3	True	NA	-6	True	AATAAA	-16	NA	196082094	196049283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196077063_196077123_196082042
transcript_141891.known	chr3	-	5597	10	FSM	ENSG00000161217.12	ENST00000292823.6	5597	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	39.0811122325521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-10	True	NA	-2	True	AATAAA	-21	NA	196287713	196234367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196283474_196283539_196287614
transcript_141895.known	chr3	+	1430	9	FSM	ENSG00000163959.10	ENST00000296327.10	1430	9	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	3.96862696659689	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCACCTTGCCTCT	-3	True	NA	11	True	AATAAA	-23	NA	196216533	196233427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196216751_196217841_196217937_196226964_196227120_196227663_196227738_196228114_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
transcript_141897.known	chr3	-	5546	9	FSM	ENSG00000161217.12	ENST00000431016.6	5546	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	16.5887763261791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-23	True	NA	-2	True	AATAAA	-21	NA	196287726	196234367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_141911.known	chr3	-	603	5	FSM	ENSG00000213123.11	ENST00000426563.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	174.015085552949	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-4	True	NA	0	True	AATAAA	-25	NA	196318214	196291218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
transcript_141912.nnic	chr3	-	639	4	NIC	ENSG00000213123.11	novel	603	5	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	208.309065253211	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGTTGTGTTTTAGGC	-7	True	NA	-3	True	AATAAA	-22	NA	196318317	196291221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318035
transcript_141913.known	chr3	-	625	5	FSM	ENSG00000213123.11	ENST00000325318.10	625	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	216.121493609497	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-30	True	NA	0	True	AATAAA	-25	NA	196318240	196291218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
transcript_141914.known	chr3	+	322	2	FSM	ENSG00000235897.1	ENST00000420226.1	322	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGTGAATTTTGTTGT	599	False	NA	NA	False	TTTAAA	-23	NA	196318329	196323673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196318438_196323459
transcript_141915.known	chr3	-	800	6	FSM	ENSG00000213123.11	ENST00000446494.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.562118192274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTGTTTTAGGCC	11	True	NA	-2	True	AATAAA	-23	NA	196318299	196291220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196291375_196296005_196296070_196305655_196305774_196306942_196307013_196316097_196316232_196318039
transcript_141916.known	chr3	-	10521	11	FSM	ENSG00000163960.12	ENST00000296328.9	10521	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	3.85227205685164	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTTTTGTGTTGTT	8	True	NA	-8	True	AATAAA	-19	NA	196432427	196347661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196407245_196407394_196432326
transcript_141919.known	chr3	-	3158	10	FSM	ENSG00000163960.12	ENST00000429160.1	3158	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	9.15302014516399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTGTATAAATATTT	8	True	NA	-54	True	NA	NA	NA	196432427	196354876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196432326
transcript_141925.known	chr3	-	5347	6	FSM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.81575680566778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATTATGTGTATTTT	-6	True	NA	-20	True	AATAAA	-17	NA	196503768	196468782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196488606_196488684_196502872
transcript_141928.nic	chr3	-	1350	4	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-93	15005	-93	-12028	5prime_fragment	FALSE	canonical	3	13	junction_1	4.10960933531265	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAGATATTCAGAAGT	NA	False	NA	NA	False	AAGAAA	-21	NA	196503861	196483787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_196483892_196487398_196487579_196488606_196488684_196502872
transcript_141930.nic	chr3	-	1163	3	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-93	18699	-93	-15722	5prime_fragment	FALSE	canonical	3	19	junction_1	2	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGCAGAAAAAAGGCGA	NA	False	NA	15	True	AATACA	-40	NA	196503861	196487481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_196487579_196488606_196488684_196502872
transcript_141931.nic	chr3	-	1015	3	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	18754	0	-15777	5prime_fragment	FALSE	canonical	3	19	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGTGAAGAATACATACA	-6	True	NA	-40	True	AAGAAA	-6	NA	196503768	196487536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_196487579_196488606_196488684_196502872
transcript_141935.known	chr3	-	1594	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	36.7695526217005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-1	True	NA	4	True	AATAAA	-25	NA	196568554	196554176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
transcript_141936.known	chr3	+	3689	3	FSM	ENSG00000174013.8	ENST00000440469.1	3689	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	89	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTAATGTCATTTC	NA	False	NA	18	True	ATTAAA	-18	NA	196568610	196587287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196568788_196577452_196577810_196584132
transcript_141937.nnic	chr3	-	1388	3	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-105	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	39	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	1076	False	NA	4	True	AATAAA	-25	NA	196568779	196554176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_196554808_196560995_196561492_196568518
transcript_141938.known	chr3	-	683	2	FSM	ENSG00000185798.8	ENST00000429115.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCAAAACTGTTTTTC	-1	True	NA	-7	True	AATAAA	-14	NA	196568581	196554187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196554808_196568518
transcript_141942.known	chr3	+	953	7	FSM	ENSG00000163964.18	ENST00000296333.10	953	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.284669047808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATGTAGTTAAATGCT	-1	True	NA	-30	True	NA	NA	NA	196712410	196733902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196727922_196728137_196728701_196728756_196730991_196731093_196733758
transcript_141946.known	chr3	+	3038	6	FSM	ENSG00000163964.18	ENST00000392391.9	3038	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	24.9270936934092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATATAACTCTTCTTG	26	True	NA	16	True	AATAAA	-18	NA	196712376	196736007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196727922_196728137_196730991_196731093_196733758
transcript_141954.known	chr3	+	523	5	FSM	ENSG00000163964.18	ENST00000457284.5	523	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	105.368401335505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTGCACTGCCGC	148	False	NA	NA	False	NA	NA	NA	196712559	196728037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196726654_196726772_196727922
transcript_141956.known	chr3	+	677	4	FSM	ENSG00000163964.18	ENST00000421265.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	29.6310647800581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATCTGCCATCCCTGT	191	False	NA	NA	False	AATAAA	-16	NA	196712602	196728351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196727922
transcript_141957.known	chr3	+	838	4	FSM	ENSG00000163964.18	ENST00000451319.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	100.499861802006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTGATGTTTTGTG	269	False	NA	NA	False	NA	NA	NA	196712680	196728110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196713125_196716857_196716922_196722414_196722557_196727922
transcript_141958.known	chr3	+	2556	3	FSM	ENSG00000174004.6	ENST00000328557.5	2556	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTTGTGTTTTTTTTT	1	True	NA	23	True	AATAAA	-36	NA	196639693	196662004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196639876_196654526_196654648_196659751
transcript_141959.known	chr3	-	2158	3	FSM	ENSG00000174007.9	ENST00000409690.5	2158	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTCTACCTGTTC	-5	True	NA	NA	False	AATAAA	-15	NA	196712250	196706276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196707913_196708527_196708728_196711928
transcript_141960.known	chr3	+	586	2	FSM	ENSG00000174004.6	ENST00000461791.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGGCCGAGGCAGGCAG	-26	True	NA	NA	False	NA	NA	NA	196639756	196654993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196639876_196654526
transcript_141963.known	chr3	+	6139	15	FSM	ENSG00000180370.10	ENST00000327134.7	6139	15	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_8	21.3432826501856	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGTGCCATCATTTT	-40	True	NA	NA	False	GATAAA	-18	NA	196739856	196832647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781_196807915_196810589_196810654_196812218_196812268_196812738_196812852_196814450_196814569_196818056_196818157_196820370_196820568_196827195_196827334_196828318
transcript_141970.nic	chr3	+	1163	8	ISM	ENSG00000180370.10	ENST00000327134.7	6139	15	-97	22023	-97	2580	5prime_fragment	FALSE	canonical	3	215	junction_5	14.5896244933563	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAAGATATGAAAAAAT	NA	False	NA	-4	True	AAGAAA	-4	NA	196739759	196810624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781_196807915_196810589
transcript_141973.nic	chr3	+	501	2	ISM	ENSG00000180370.10	ENST00000327134.7	6139	15	9	49813	9	-25210	5prime_fragment	FALSE	canonical	3	257	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATAGCGCTTCTGGCTTT	-31	True	NA	38	True	CATAAA	-33	NA	196739865	196782834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_196740158_196782625
transcript_141974.nic	chr3	+	1275	2	ISM	ENSG00000180370.10	ENST00000327134.7	6139	15	-3	49051	-3	-24448	5prime_fragment	FALSE	canonical	3	257	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTACGTATATATATGTGT	-43	True	NA	NA	False	NA	NA	NA	196739853	196783596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_196740158_196782625
transcript_141975.known	chr3	+	6244	10	FSM	ENSG00000119231.11	ENST00000323460.10	6244	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	8.19364402870517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTCTCTCGTCTTGA	13	True	NA	8	True	AATAAA	-18	NA	196867919	196934714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196868074_196885150_196886695_196899665_196899772_196899923_196900063_196900364_196900413_196903532_196903611_196923413_196923552_196927795_196927880_196929632_196929684_196930812
transcript_141976.known	chr3	+	2491	9	FSM	ENSG00000119231.11	ENST00000445299.6	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	12.4774797134678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTATTGTTACCTCAAAT	NA	False	NA	NA	False	NA	NA	NA	196867855	196931035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196868074_196885150_196886695_196899665_196899772_196899923_196900063_196900364_196900413_196903532_196903611_196927795_196927880_196929632_196929684_196930812
transcript_141985.known	chr3	-	1946	4	FSM	ENSG00000114503.11	ENST00000427641.2	1946	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	346.973902316714	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-18	True	NA	10	True	NA	NA	NA	196942560	196935433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937632_196939392_196939433_196942425
transcript_141986.known	chr3	-	1133	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	346.82015832737	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTTCTTTGACAACA	-4	True	NA	50	True	NA	NA	NA	196942440	196936776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
transcript_141987.known	chr3	-	2216	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	363.752968678226	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	746	False	NA	-5	True	AATAAA	-16	NA	196942377	196935405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
transcript_141988.known	chr3	-	2220	4	FSM	ENSG00000114503.11	ENST00000428425.1	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	339.295675710074	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTTGTTGCTGCCTGTT	529	False	NA	-8	True	AATAAA	-13	NA	196942594	196935408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942369
transcript_141989.known	chr3	-	2101	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_2	26.6624996744283	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	14	True	NA	-5	True	AATAAA	-16	NA	196942528	196935405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
transcript_141994.known	chr3	-	1096	3	FSM	ENSG00000114503.11	ENST00000468923.5	1096	3	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATCTTGGCCATGT	19	True	NA	-6	True	ATTAAA	-34	NA	196942523	196936832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937649_196939250_196939433_196942425
transcript_141996.known	chr3	-	4161	2	FSM	ENSG00000114503.11	ENST00000463783.1	4161	2	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTGTTGCTGCCTGTTTC	-18	True	NA	-6	True	AATAAA	-15	NA	196942560	196935406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196939433_196942425
transcript_141998.known	chr3	+	870	1	FSM	ENSG00000270170.2	ENST00000602845.2	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	688	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGTGCTGGGACTTG	-3	True	NA	20	True	AATAAA	-20	NA	196942673	196943543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196942700_196943500
transcript_141999.known	chr3	-	868	2	FSM	ENSG00000119227.8	ENST00000238138.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTCCCATGGGAACA	NA	False	NA	NA	False	AATACA	-24	NA	196969060	196951537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196952032_196968686
transcript_1420.nic	chr1	-	658	5	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-161	13870	-161	-7836	5prime_fragment	FALSE	canonical	3	78	junction_1	9.93415824315276	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	18	True	NA	17	True	AAAAAG	-4	NA	1659173	1649607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_142001.known	chr3	-	1650	7	FSM	ENSG00000163975.13	ENST00000296351.8	1650	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.06885187191123	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTGTGGTTTAATTATA	23	True	NA	NA	False	CATAAA	-18	NA	197029791	197018952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197019802_197021403_197021472_197022956_197023114_197024302_197024486_197026659_197026760_197027755_197027911_197029653
transcript_142003.known	chr3	-	4649	26	FSM	ENSG00000075711.21	ENST00000660898.1	4649	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	80.6245024790851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGGAGAACAGCTAATAAA	-9	True	NA	-37	True	NA	NA	NA	197297853	197042963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
transcript_142004.known	chr3	-	5034	26	FSM	ENSG00000075711.21	ENST00000346964.6	5034	26	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_25	69.1742611091727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	730	False	NA	0	True	ATTAAA	-25	NA	197298576	197042559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
transcript_142009.known	chr3	-	4513	25	FSM	ENSG00000075711.21	ENST00000671185.1	4513	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	91.1709322585268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	-9	True	NA	-11	True	AATAAA	-7	NA	197297853	197042937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
transcript_142010.known	chr3	-	4272	25	FSM	ENSG00000075711.21	ENST00000659716.1	4272	25	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	85.4046637908154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGGAGTTGTTTATTA	8	True	NA	-45	True	NA	NA	NA	197298612	197043074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_142011.known	chr3	-	3202	25	FSM	ENSG00000075711.21	ENST00000661013.1	3202	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	75.6118445857967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATCATCAAAGCAATTG	1612	False	NA	-81	True	NA	NA	NA	197297694	197044152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
transcript_142012.known	chr3	-	2851	25	FSM	ENSG00000075711.21	ENST00000656944.1	2851	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_24	69.18508790837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATGTTTCTCTGTTT	748	False	NA	NA	False	AAGAAA	-9	NA	197298558	197044622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
transcript_142014.known	chr3	-	4436	25	FSM	ENSG00000075711.21	ENST00000657381.1	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_24	68.2118330399255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATTCCATTTATGAAG	-3	True	NA	45	True	NA	NA	NA	197298623	197042984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_142015.known	chr3	-	4693	25	FSM	ENSG00000075711.21	ENST00000670455.1	4693	25	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_24	55.5569652598924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTGTAAAATCCATATG	1	True	NA	-16	True	AATAAA	-2	NA	197297843	197042942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297543
transcript_142027.known	chr3	-	479	4	FSM	ENSG00000075711.21	ENST00000486877.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	123.834118436273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTAAAATAATATTTT	1573	False	NA	NA	False	NA	NA	NA	197297733	197282609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197282846_197296345_197296478_197297185_197297236_197297672
transcript_142046.known	chr3	-	3527	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	56.9679465908287	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	6	True	NA	-7	True	ATTAAA	-15	NA	197555968	197509782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
transcript_142051.known	chr3	-	3455	7	FSM	ENSG00000161267.12	ENST00000392378.6	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_6	10.899796124495	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197556048	197509782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_142052.known	chr3	-	1605	7	FSM	ENSG00000161267.12	ENST00000441275.5	1605	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.2339345014613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTCATTTGATCCTTAA	-13	True	NA	-26	True	ATTAAA	-4	NA	197555987	197511593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532515_197533484_197533562_197554561_197554714_197555780
transcript_142053.known	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	54.0718041126797	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	2	True	NA	NA	False	NA	NA	NA	197555972	197512167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
transcript_142072.known	chr3	-	1552	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	3	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.3146198811363	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	197627906	197614026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_142085.known	chr3	-	9255	20	FSM	ENSG00000145016.16	ENST00000296343.10	9255	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.16787115397271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCTTTTCCTTGAAAT	-23	True	NA	-3	True	ATTAAA	-13	NA	197736904	197668866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197675197_197675421_197675516_197676884_197677039_197677479_197677542_197681128_197681368_197681834_197681900_197682469_197682616_197683306_197683440_197684156_197684218_197693714_197693817_197694374_197694586_197695865_197695982_197696953_197697050_197700612_197701147_197701707_197701865_197703547_197703655_197704541_197704702_197705091_197705176_197717976_197718131_197736654
transcript_142090.nic	chr3	-	4175	19	NIC	ENSG00000145016.16	novel	9255	20	NA	NA	-7	211	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	9.79732893808244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCTGTGTAGCCTGGT	-39	True	NA	-20	True	NA	NA	NA	197736920	197673808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_197675197_197675421_197675516_197676884_197677039_197677479_197677542_197681128_197681368_197681834_197681900_197682469_197682616_197683306_197683440_197684156_197684218_197693714_197693817_197694374_197694586_197695865_197695982_197696953_197697050_197700612_197701147_197701707_197701865_197703547_197703655_197704541_197704702_197705091_197705176_197736654
transcript_142101.known	chr3	+	6733	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_4	18.9962989816438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTATCAATTGCTA	-32	True	NA	13	True	AATAAA	-17	NA	197749882	197787596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_142106.known	chr3	+	1758	9	FSM	ENSG00000122068.13	ENST00000424384.2	1758	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	87.2263578283537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACAATGTATTAGAATT	145	False	NA	NA	False	NA	NA	NA	197750389	197782380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197750823_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_142111.known	chr3	-	416	2	FSM	ENSG00000145016.16	ENST00000472149.1	416	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATTAGCCGGGC	-8	True	NA	NA	False	AATAAA	-13	NA	197749347	197748108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197748446_197749268
transcript_142115.nnic	chr3	+	3231	22	NNC	ENSG00000186001.14	novel	7394	22	NA	NA	-20	1831	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_21	38.7609102481522	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTTTTGTTTCTGTAG	252	False	NA	7	True	AATAAA	-13	NA	197791205	197885829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540_197884169_197885507
transcript_142117.nnic	chr3	+	3235	22	NNC	ENSG00000186001.14	novel	7394	22	NA	NA	-20	1833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	43.7225845426934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	252	False	NA	9	True	AATAAA	-15	NA	197791205	197885831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540_197884181_197885517
transcript_142125.known	chr3	+	7129	21	FSM	ENSG00000186001.14	ENST00000425562.7	7129	21	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_20	27.7875421727075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGAGCGTGTTCAT	1	True	NA	17	True	AATAAA	-30	NA	197791253	197888436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540
transcript_14213.known	chr1	-	3180	3	FSM	ENSG00000163348.4	ENST00000368457.3	3180	3	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	17	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGACTCCTTGCTGTT	-21	True	NA	-7	True	AATAAA	-18	NA	154961782	154957025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154959847_154960976_154961027_154961473
transcript_14214.known	chr1	-	1306	3	FSM	ENSG00000163348.4	ENST00000368456.1	1306	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	143.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTTCCAGGGTGATTT	9070	False	NA	NA	False	NA	NA	NA	154962036	154958739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154959847_154960976_154961027_154961887
transcript_142140.known	chr3	+	2258	19	FSM	ENSG00000186001.14	ENST00000334859.8	2258	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_16	24.5344932294248	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTCTCACTTCTAC	21	True	NA	NA	False	TATAAA	-16	NA	197791273	197871585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324
transcript_142145.nic	chr3	+	2874	12	ISM	ENSG00000186001.14	ENST00000334859.8	2258	19	-68	22293	-20	793	5prime_fragment	FALSE	canonical	3	147	junction_11	21.935291764492	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCAAATCTTTTGACCA	252	False	NA	NA	False	NA	NA	NA	197791205	197849292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871
transcript_142157.known	chr3	-	1981	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	3.78021163428716	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	-20	True	NA	-11	True	AATAAA	-24	NA	197949925	197889076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
transcript_142159.known	chr3	+	442	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5802.8209949989	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	16	False	NA	14	True	AATAAA	-25	NA	197950205	197955817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
transcript_142161.known	chr3	+	553	5	FSM	ENSG00000182899.17	ENST00000448864.6	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_1	4873.50471298633	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	0	True	NA	48	True	ATTAAA	-18	NA	197950189	197955851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197950300_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_142166.known	chr3	+	564	5	FSM	ENSG00000182899.17	ENST00000439255.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7064.38378416688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	429	False	NA	14	True	AATAAA	-25	NA	197950953	197955817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197950979_197951158_197951312_197953487_197953661_197954002_197954148_197955749
transcript_142168.known	chr4	+	2872	4	FSM	ENSG00000272602.6	ENST00000610261.6	2872	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	8.05536398239638	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGTTAAATATGTAAA	-19	True	NA	NA	False	AATAAA	-23	NA	53320	88208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53492_59429_59557_60057_60154_85730
transcript_14217.known	chr1	+	799	1	FSM	ENSG00000271380.1	ENST00000605085.1	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGTATAAAAGGTG	-8	True	NA	NA	False	AATAAA	-15	NA	154961824	154962623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154961800_154962600
transcript_14218.known	chr1	-	3481	12	FSM	ENSG00000160691.19	ENST00000448116.7	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_3	137.164798028437	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-2	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_142182.nnic	chr4	-	703	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-40	37663	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	39.6316371938716	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCAGAATTTATTTGAT	NA	False	NA	-6	True	AATAAA	-14	NA	305514	233011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_233285_295437_295534_296028_296156_305307
transcript_142183.nnic	chr4	-	1479	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-40	23670	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	25.5081686262787	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTCTTTCCCTTTATTT	NA	False	NA	-3	True	TTTAAA	-12	NA	305514	247004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_142189.known	chr4	-	1815	3	FSM	ENSG00000251595.7	ENST00000451020.6	1815	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAAATGAGTTTTT	9	True	NA	NA	False	AATAAA	-21	NA	474129	425434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_426974_472574_472702_473980
transcript_14219.known	chr1	-	3472	12	FSM	ENSG00000160691.19	ENST00000368445.9	3472	12	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_3	209.930881974548	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	4	True	NA	-14	True	ATTAAA	-17	NA	154970741	154962297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_142190.known	chr4	-	664	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	29.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-29	True	NA	NA	False	CATAAA	-1	NA	474167	444082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_444433_472574_472702_473980
transcript_142192.nnic	chr4	-	645	3	NNC	ENSG00000251595.7	novel	1815	3	NA	NA	-49	-30234	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	125	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGTGATCATGACT	NA	False	NA	NA	False	AATAAA	-35	NA	474178	456048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_456369_472574_472702_473980
transcript_142197.nic	chr4	+	3464	13	NIC	ENSG00000174227.16	novel	3019	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	36.6313276672668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGTATCATATTTTC	-24	True	NA	6	True	AATAAA	-16	NA	499218	539528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_499726_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_142199.known	chr4	+	3909	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_11	32.4819394262241	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTACATTTTTACA	-33	True	NA	9	True	AATAAA	-20	NA	499209	540200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_1422.nnic	chr1	-	459	5	NNC	ENSG00000248333.9	novel	2992	20	NA	NA	0	-7836	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	37.6031913539263	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	-17	True	NA	17	True	AAAAAG	-4	NA	1659004	1649607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_1649638_1652468_1652567_1655368_1655485_1657374_1657499_1658913
transcript_14221.known	chr1	+	779	3	FSM	ENSG00000173207.13	ENST00000308987.6	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	3587	junction_1	171.5	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATTGTACGGGTTTT	-5	True	NA	30	True	ATTAAA	-23	NA	154974680	154979251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154974805_154977986_154978115_154978724
transcript_14222.known	chr1	+	912	3	FSM	ENSG00000173207.13	ENST00000368439.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	1897	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTAATTGTACGGGT	-8	True	NA	27	True	ATTAAA	-20	NA	154974652	154979248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154974913_154977986_154978115_154978724
transcript_14223.known	chr1	+	820	2	FSM	ENSG00000173207.13	ENST00000368436.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	3587	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGAGCTTGTCTCTTA	-3	True	NA	NA	False	AATACA	-20	NA	154974682	154978684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154974805_154977986
transcript_142232.known	chr4	+	3203	13	FSM	ENSG00000174227.16	ENST00000310340.9	3203	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	38.3709959908957	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	-22	True	NA	7	True	AATAAA	-17	NA	499220	539529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_142234.known	chr4	+	3294	22	FSM	ENSG00000133256.13	ENST00000496514.6	3294	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	13.4717307108133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	-3	True	NA	10	True	AATAAA	-16	NA	625572	670782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_626095_634676_634830_635879_635970_653851_653993_654079_654155_654823_654889_655939_656007_656244_656293_656873_657024_657350_657495_658951_659018_660466_660614_662133_662242_662508_662619_663099_663188_663769_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_14224.nic	chr1	+	2377	8	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	225.586039515946	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	2	True	NA	22	True	AATAAA	-18	NA	154983350	154993111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154983398_154983841_154984067_154987465_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_142240.nic	chr4	+	1399	7	ISM	ENSG00000133256.13	ENST00000429163.6	2120	20	10511	-549	-32	0	3prime_fragment	FALSE	canonical	0	0	junction_5	13.3343749593131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	6804	False	NA	10	True	AATAAA	-16	NA	663690	670782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_142241.known	chr4	+	580	6	FSM	ENSG00000133256.13	ENST00000471824.6	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.5409765834348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAGCCCAAGAAAATG	56	False	NA	NA	False	NA	NA	NA	663769	670193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_670045
transcript_142245.nic	chr4	+	1633	6	NIC	ENSG00000133256.13	novel	3294	22	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_4	14.5684590811795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	-14	True	NA	10	True	AATAAA	-16	NA	663699	670782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_142253.known	chr4	-	1826	10	FSM	ENSG00000169026.13	ENST00000404286.6	1826	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	15.8324561160506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGGCCCCGGGTGTGGTT	54	False	NA	-8	True	NA	NA	NA	689143	681830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_682377_682780_682891_683209_683368_683608_683762_684482_684603_684718_684857_685834_685912_686088_686303_686531_686691_688992
transcript_142266.known	chr4	-	1556	8	FSM	ENSG00000169026.13	ENST00000515118.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	12.9488790784282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAGCGAATTACAAGCGC	6	True	NA	-35	True	NA	NA	NA	689191	681857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_682377_682780_682891_683209_683368_683608_683762_684482_684603_684718_684857_686531_686691_688992
transcript_142267.known	chr4	+	666	7	FSM	ENSG00000215375.6	ENST00000400159.6	666	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9.48683298050514	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGAGTCTGCCGGGGCG	3355	False	NA	28	True	AATAAA	-20	NA	677921	682033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_678030_678657_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
transcript_142270.known	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	9537	junction_3	1016.96705944686	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-7	True	NA	-12	True	AATAAA	-21	NA	674276	672435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_672520_673302_673402_673911_673967_674211
transcript_142271.known	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	5763.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-2	True	NA	-14	True	AATAAA	-19	NA	674330	672437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_672520_673302_673402_674211
transcript_142272.known	chr4	-	496	3	FSM	ENSG00000169020.10	ENST00000506525.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	8144	False	NA	-14	True	AATAAA	-19	NA	673821	672437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_672520_673302_673402_673506
transcript_142288.known	chr4	+	5685	11	FSM	ENSG00000185619.18	ENST00000362003.9	5685	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	22.5390771772049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAACAATTCTGAAACTC	-22	True	NA	NA	False	AGTAAA	-1	NA	705764	770640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_705971_730629_730669_730969_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_1423.nic	chr1	-	721	5	ISM	ENSG00000248333.9	ENST00000341028.8	881	9	-284	10704	-244	-10704	5prime_fragment	FALSE	canonical	3	22	junction_3	32.8966183672426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACGTAGGCATCGTAG	NA	False	NA	-15	True	AAAAAG	-30	NA	1659256	1652475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_14230.known	chr1	+	1730	8	FSM	ENSG00000160688.19	ENST00000315144.14	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	124.384197434516	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	10	True	NA	22	True	AATAAA	-18	NA	154983358	154993111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_142302.nic	chr4	+	1307	5	ISM	ENSG00000185619.18	ENST00000440452.5	3609	13	-192	33385	3	0	intron_retention	TRUE	canonical	3	31	junction_3	31.3926743046845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	NA	False	NA	9	True	AATAAA	-22	NA	705750	734479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_705971_730629_730669_730969_731111_732399_732499_733671
transcript_142304.known	chr4	+	1175	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	26.1661358757205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	-3	True	NA	9	True	AATAAA	-22	NA	705783	734479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_705971_730629_730669_730969_731111_733671
transcript_142305.known	chr4	-	534	2	FSM	ENSG00000249592.7	ENST00000507446.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAAAACGCCCTTCCAG	17	True	NA	NA	False	NA	NA	NA	781830	767140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_767616_781771
transcript_142306.known	chr4	+	1652	11	FSM	ENSG00000185619.18	ENST00000470161.6	1652	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.3475568143353	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTCCATTAACATTAT	-3	True	NA	23	True	TATAAA	-26	NA	705783	766608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_705971_730629_730669_730951_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_142307.known	chr4	-	2112	4	FSM	ENSG00000168993.15	ENST00000304062.11	2112	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.96655480858378	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTGTGGCCATTCCTTC	14	True	NA	-1	True	AATAAA	-15	NA	826129	784956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_786699_792432_792609_824491_824602_826045
transcript_142325.nic	chr4	-	4505	28	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	54.9983164725504	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTCCAGTGTG	-3	True	NA	-4	True	ATTAAA	-14	NA	932394	849277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866502_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_142330.known	chr4	-	4461	28	FSM	ENSG00000178950.18	ENST00000314167.9	4461	28	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	39.8246499480438	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTCCAGTGTGG	-8	True	NA	-3	True	ATTAAA	-15	NA	932316	849276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_14234.nic	chr1	+	1981	8	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_1	253.646226392717	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	-5	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154983634_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_142363.known	chr4	-	4280	25	FSM	ENSG00000178950.18	ENST00000511163.5	4280	25	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_24	61.1385039616334	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTCCAGTGTG	18	False	NA	-4	True	ATTAAA	-14	NA	932373	849277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_932042
transcript_142382.nic	chr4	+	2012	12	NIC	ENSG00000127419.17	novel	2084	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	19.9656730208013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	-23	True	NA	12	True	NA	NA	NA	932439	958656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_932541_947708_947893_948115_948155_948410_948616_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_142387.known	chr4	+	1787	11	FSM	ENSG00000127419.17	ENST00000264771.9	1787	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	9.64157663455516	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	-3	True	NA	12	True	NA	NA	NA	932459	958656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_142390.known	chr4	+	2236	11	FSM	ENSG00000127419.17	ENST00000438836.6	2236	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	15.3609895514579	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	9	True	NA	12	True	NA	NA	NA	932471	958656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_947708_947893_948115_948616_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_142394.known	chr4	+	1007	10	FSM	ENSG00000127419.17	ENST00000515876.5	1007	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	9.78661217060213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCGTCTCATCCTGGA	-2	True	NA	NA	False	NA	NA	NA	932460	955944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754
transcript_142396.nnic	chr4	+	1708	10	NIC	ENSG00000127419.17	novel	1787	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	15.1934033768883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	-8	True	NA	12	True	NA	NA	NA	932454	958656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_953189_953355_955404_955484_955754_955891_957823
transcript_142400.nic	chr4	+	2544	10	NIC	ENSG00000127419.17	novel	2236	11	NA	NA	0	0	intron_retention	TRUE	canonical	2	8	junction_2	16.1528195757556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	-1	True	NA	12	True	NA	NA	NA	932386	958656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_932541_947708_948616_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_142402.known	chr4	+	1399	9	FSM	ENSG00000127419.17	ENST00000508204.5	1399	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	16.7537309277665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCCAGCCGTCCTCACC	15	True	NA	NA	False	NA	NA	NA	932477	958509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_142417.known	chr4	+	2174	14	FSM	ENSG00000127415.13	ENST00000514224.2	2174	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	8.45314268788686	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGGTTGAGGCTCTGT	-10	True	NA	9	True	TTTAAA	-19	NA	987043	1004564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_987243_987808_987950_1000611_1000698_1000881_1000990_1001467_1001564_1001678_1001882_1001981_1002162_1002268_1002486_1002731_1002945_1003035_1003158_1003344_1003471_1003548_1003626_1004011_1004113_1004259
transcript_142429.known	chr4	+	3100	6	FSM	ENSG00000127418.15	ENST00000264748.6	3100	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	8.63481325796916	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTGTTTCTGCCCAT	310	False	NA	25	True	NA	NA	NA	1012450	1026897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310_1024665_1024904
transcript_142432.known	chr4	-	2335	10	FSM	ENSG00000178222.13	ENST00000382968.9	2335	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.47832796499967	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCATTTTGTGGCTTG	-13	True	NA	-22	True	GATAAA	-20	NA	1113562	1071477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1073141_1073598_1073663_1079642_1079689_1081418_1081468_1081566_1081620_1085895_1085955_1090781_1090839_1096764_1096840_1108342_1108405_1113355
transcript_142433.known	chr4	-	1579	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	1.85472369909914	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGGCTGTCCCCACA	-1	True	NA	-19	True	AATAAA	-23	NA	1172583	1166931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
transcript_142442.nnic	chr4	-	2336	10	NNC	ENSG00000159692.16	novel	2488	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	377.742939570102	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	677	False	NA	-19	True	AATAAA	-15	NA	1248748	1211447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241498_1248660
transcript_142443.nnic	chr4	-	6061	10	NNC	ENSG00000159692.16	novel	2488	10	NA	NA	3299	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_9	360.817282168012	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	3984	False	NA	-19	True	AATAAA	-15	NA	1245441	1211447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1241650
transcript_142445.nic	chr4	-	2358	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_9	351.906904075215	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	677	False	NA	-19	True	AATAAA	-15	NA	1248748	1211447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
transcript_142446.known	chr4	-	2488	10	FSM	ENSG00000159692.16	ENST00000382952.8	2488	10	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_9	169.005661385194	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGCCCAGCATCTATTCT	-12	True	NA	-16	True	AATAAA	-18	NA	1249130	1211444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248915
transcript_142447.nic	chr4	-	2612	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	394.699729596069	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	NA	False	NA	-19	True	AATAAA	-15	NA	1249990	1211447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1249648
transcript_142448.nnic	chr4	-	2143	9	NIC	ENSG00000159692.16	novel	2297	9	NA	NA	12	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_8	418.314475006543	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-22	True	NA	-19	True	AATAAA	-15	NA	1248728	1211447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1248660
transcript_142449.known	chr4	-	2297	9	FSM	ENSG00000159692.16	ENST00000290921.10	2297	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	366.694610677605	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-19	True	NA	-19	True	AATAAA	-15	NA	1249137	1211447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1248915
transcript_142454.known	chr4	+	2757	3	FSM	ENSG00000196810.5	ENST00000578730.1	2757	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCTGTCTCAGACACT	-6	True	NA	NA	False	CATAAA	-14	NA	1249450	1288291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1251823_1287604_1287724_1288025
transcript_142457.known	chr4	+	739	2	FSM	ENSG00000196810.5	ENST00000507044.1	739	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCCCTGCAGAGATCTA	32	False	NA	NA	False	NA	NA	NA	1249299	1250446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1249703_1250110
transcript_142460.known	chr4	+	533	2	FSM	ENSG00000196810.5	ENST00000514984.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTCCAACTGGGGTCC	653	False	NA	NA	False	NA	NA	NA	1250109	1251187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1250351_1250895
transcript_142469.known	chr4	+	2182	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_4	43.9912988555692	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTGAGCCGAGGCT	-4	True	NA	37	True	AATAAA	-45	NA	1289890	1340137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_142476.known	chr4	+	1607	9	FSM	ENSG00000090316.16	ENST00000510794.5	1607	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	225.840651787937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGATGCTTCTGAA	NA	False	NA	NA	False	AAAACA	-30	NA	1309442	1339384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1309713_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_142480.known	chr4	+	2058	8	FSM	ENSG00000090316.16	ENST00000264750.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	247.856772334017	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	-4	True	NA	36	True	AATAAA	-44	NA	1289890	1340136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_142481.nic	chr4	+	2014	8	NIC	ENSG00000090316.16	novel	2182	9	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	244.210514741286	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATGGTTTTCTATTT	NA	False	NA	13	True	AATAAA	-21	NA	1289830	1340113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_1289983_1311978_1312162_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_142484.known	chr4	+	1001	7	FSM	ENSG00000090316.16	ENST00000509531.5	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	264.426423288849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCGCACGCCTCGGGG	19	True	NA	NA	False	NA	NA	NA	1289913	1339179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_142501.known	chr4	-	2802	5	FSM	ENSG00000174137.14	ENST00000308132.11	2848	5	52	-6	52	6	multi-exon	FALSE	canonical	3	7	junction_4	4.76313972081441	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTTGAAATTTTCTT	40	False	NA	NA	False	AATAAA	-44	NA	1684261	1639880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1641608_1654977_1655724_1657407_1657469_1668666_1668906_1684232
transcript_142502.known	chr4	-	1623	7	FSM	ENSG00000163950.13	ENST00000429429.6	1623	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	180.127424033346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGACTGGGGCTGTT	-1	True	NA	-10	True	AATAAA	-16	NA	1712318	1692799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1712129
transcript_142503.known	chr4	-	1810	8	FSM	ENSG00000163950.13	ENST00000489418.6	1810	8	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_7	27.2021907881235	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGCCTTTCTTGTG	-2	True	NA	-5	True	NA	NA	NA	1712319	1692730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
transcript_142504.known	chr4	-	1635	8	FSM	ENSG00000163950.13	ENST00000318386.8	1635	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	167.299072298195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACGTTTCTATTGCTTTT	9085	False	NA	-27	True	NA	NA	NA	1712250	1692857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700092_1703595_1703701_1711873_1711991_1712129
transcript_142513.known	chr4	+	2799	16	FSM	ENSG00000013810.21	ENST00000313288.9	2799	16	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	94.2158278752685	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGCCGCTCTGGTCT	18	True	NA	30	True	AATAAA	-20	NA	1721520	1745171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_142525.known	chr4	+	1732	15	FSM	ENSG00000013810.21	ENST00000612220.5	1732	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	207.115379950995	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACACTGAAGCCGC	-3	True	NA	22	True	AATAAA	-12	NA	1721499	1745163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_142545.nnic	chr4	-	3025	4	NNC	ENSG00000168936.11	novel	2803	4	NA	NA	7	0	intron_retention	TRUE	canonical	3	17	junction_3	109.693512418313	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-16	True	NA	-3	True	AATAAA	-17	NA	1721351	1715951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1717429_1717515_1717676_1718151_1718627_1720438
transcript_142546.known	chr4	-	2803	4	FSM	ENSG00000168936.11	ENST00000382936.8	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	11.0855260988773	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	12	True	NA	-3	True	AATAAA	-17	NA	1721323	1715951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1717429_1717515_1717676_1718151_1718627_1720632
transcript_142560.nic	chr4	-	3219	3	NIC	ENSG00000168936.11	novel	2803	4	NA	NA	60	0	intron_retention	FALSE	canonical	3	228	junction_2	8	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-9	True	NA	-3	True	AATAAA	-17	NA	1721263	1715951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1717429_1717515_1718627_1720632
transcript_142565.known	chr4	-	2678	3	FSM	ENSG00000168936.11	ENST00000303277.6	2678	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	99	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	NA	False	NA	-3	True	AATAAA	-17	NA	1721358	1715951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1717429_1718151_1718627_1720632
transcript_142569.nic	chr4	-	3408	2	NIC	ENSG00000168936.11	novel	2678	3	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	228	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTACTGTGTTTTGTGTT	NA	False	NA	-5	True	AATAAA	-15	NA	1721367	1715953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1718627_1720632
transcript_142574.known	chr4	-	5371	14	FSM	ENSG00000168924.15	ENST00000302787.3	5371	14	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_11	23.8183460691009	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCAGAGTAATAATATT	-19	True	NA	-5	True	ATTAAA	-24	NA	1856156	1811478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1814574_1815663_1815803_1816726_1816915_1819337_1819473_1822180_1822313_1822987_1823132_1823643_1823776_1825563_1825684_1832743_1832948_1834844_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
transcript_142585.known	chr4	-	1626	5	FSM	ENSG00000168924.15	ENST00000466175.5	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	21.7140507506085	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGCCAGGCTGAGGC	280	False	NA	NA	False	NA	NA	NA	1855955	1834099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
transcript_142588.known	chr4	+	7560	22	FSM	ENSG00000109685.19	ENST00000508803.6	7560	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	77.3101360938987	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTAACTTATTTTA	-7	True	NA	13	True	ATTAAA	-15	NA	1871392	1982192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
transcript_142593.known	chr4	+	2092	5	FSM	ENSG00000109685.19	ENST00000508355.5	2092	5	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_4	30.3263499287336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCACAGAGGGAAGTGG	10	True	NA	NA	False	NA	NA	NA	1871453	1919187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140
transcript_142596.known	chr4	-	2198	11	FSM	ENSG00000185049.16	ENST00000382882.9	2198	11	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_3	24.7394421925799	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATAGCTGTGTTTGG	-5	True	NA	-12	True	ATTAAA	-21	NA	2008974	1982722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543_1991716_2008749
transcript_142612.known	chr4	+	425	4	FSM	ENSG00000243449.8	ENST00000409248.10	425	4	0	0	0	0	multi-exon	TRUE	canonical	3	814	junction_1	196.312675766662	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTCCTGTCTCTCT	-12	True	NA	13	True	AATAAA	-13	NA	2041994	2043964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2042069_2042326_2042485_2042735_2042825_2043860
transcript_142613.known	chr4	+	477	4	FSM	ENSG00000243449.8	ENST00000409860.1	477	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	554.778033691554	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTCCTGTCTCTCT	43	False	NA	13	True	AATAAA	-13	NA	2042049	2043964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2042176_2042326_2042485_2042735_2042825_2043860
transcript_142614.known	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	44.3558338891289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	4	True	NA	NA	False	NA	NA	NA	2242121	2228348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
transcript_142621.nic	chr4	-	3349	5	ISM	ENSG00000214367.9	ENST00000443786.3	5879	6	-58	2848	-46	-2848	intron_retention	FALSE	canonical	3	145	junction_4	11.247221879202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTCCTCCATAATTCC	NA	False	NA	-4	True	AATAAA	-16	NA	2242179	2231196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
transcript_142622.known	chr4	-	5620	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	61.4750965839014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-8	True	NA	NA	False	NA	NA	NA	2242133	2228348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
transcript_142624.known	chr4	-	5738	27	FSM	ENSG00000214367.9	ENST00000672739.1	5738	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.3097020448404	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATACCACTGCACTCC	NA	False	NA	NA	False	NA	NA	NA	2242276	2078997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2079360_2080957_2081159_2081632_2081744_2085612_2085745_2095850_2095934_2123501_2123618_2128112_2128228_2129178_2129257_2131232_2131291_2156787_2156854_2157857_2157912_2159154_2159212_2170678_2170775_2171097_2171182_2173954_2174020_2174690_2174752_2179307_2179466_2193203_2193317_2198523_2198718_2207986_2208488_2213046_2213127_2229098_2229244_2231834_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
transcript_142632.known	chr4	-	3871	6	FSM	ENSG00000123933.17	ENST00000337190.7	3871	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	29.5607848339654	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-5	True	NA	-3	True	TATAAA	-20	NA	2262109	2247431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
transcript_142639.known	chr4	-	4114	13	FSM	ENSG00000159733.14	ENST00000290974.7	4114	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	3.41869858279434	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCTCCTTTCTTCCAT	13	True	NA	1	True	CATAAA	-18	NA	2418645	2269596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2270857_2271310_2271415_2271674_2271780_2273172_2273290_2274061_2274217_2304288_2305537_2320169_2320272_2335704_2335795_2337406_2337497_2339452_2339656_2341477_2341616_2353932_2354074_2418284
transcript_142648.known	chr4	+	2921	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	312.750666812777	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	-21	True	NA	17	True	AATAAA	-20	NA	2469105	2515857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_14265.known	chr1	+	1803	3	FSM	ENSG00000160688.19	ENST00000368431.7	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	332.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	18	True	NA	14	True	AATAAA	-18	NA	154983366	154989012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154983398_154983841_154984067_154987465
transcript_142652.known	chr4	+	855	8	FSM	ENSG00000063978.16	ENST00000502316.5	855	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	348.243932803852	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGAAGTATTCAGAGC	NA	False	NA	NA	False	AAAAAG	-29	NA	2469096	2513811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2469230_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_14266.nic	chr1	+	1341	3	ISM	ENSG00000160688.19	ENST00000315144.14	1730	8	-171	4101	-150	-2	5prime_fragment	FALSE	canonical	3	696	junction_1	100.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCATCAGCACTGTGC	8096	False	NA	12	True	AATAAA	-16	NA	154983187	154989010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_154983398_154983841_154984067_154988104
transcript_142660.known	chr4	-	2006	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	137.505490799459	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	16	True	NA	6	True	AATAAA	-34	NA	2756331	2741647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
transcript_142661.known	chr4	-	1946	6	FSM	ENSG00000168884.15	ENST00000315423.12	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	38.270615359568	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	11	True	NA	6	True	AATAAA	-34	NA	2756336	2741647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2756013
transcript_142666.known	chr4	-	1653	5	FSM	ENSG00000168884.15	ENST00000503235.1	1653	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	146.017764330235	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTTTTATAATAAACGT	5	True	NA	-44	True	NA	NA	NA	2756342	2741697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2742521_2744386_2744507_2745445_2745536_2747654_2747946_2756013
transcript_142667.nic	chr4	-	2238	5	NIC	ENSG00000168884.15	novel	1946	6	NA	NA	-96	0	intron_retention	FALSE	canonical	3	314	junction_1	29.4066319050652	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	6305	False	NA	6	True	AATAAA	-34	NA	2756438	2741647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_2742521_2744386_2744946_2745445_2745536_2747654_2747946_2756013
transcript_14267.known	chr1	+	757	3	FSM	ENSG00000160688.19	ENST00000487371.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	432.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGGTCAACCTT	44	False	NA	NA	False	NA	NA	NA	154983430	154988433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154983634_154983841_154984067_154988104
transcript_142682.known	chr4	+	9006	13	FSM	ENSG00000087266.17	ENST00000503393.8	9006	13	0	0	0	0	multi-exon	TRUE	canonical	1	21	junction_1	35.7351367704113	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTCTCACTTGTGTT	-2	True	NA	7	True	ATTAAA	-23	NA	2793084	2841096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2793139_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
transcript_142684.known	chr4	+	2351	13	FSM	ENSG00000087266.17	ENST00000511747.6	2351	13	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_9	27.7288457907806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTGGGGCTTGAT	-4	True	NA	18	True	AATAAA	-18	NA	2818184	2834289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2818391_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
transcript_142695.known	chr4	+	3107	16	FSM	ENSG00000087274.19	ENST00000513328.6	3107	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	298.367930954756	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGCTTTCTTCTTT	9	True	NA	NA	False	NA	NA	NA	2843972	2929307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926638_2926676_2928170
transcript_142697.known	chr4	+	4140	16	FSM	ENSG00000087274.19	ENST00000683351.1	4140	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	401.231216244311	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	-30	True	NA	14	True	AATAAA	-14	NA	2843843	2930062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2909338_2909432_2914883_2915041_2926013_2926113_2928170
transcript_142698.known	chr4	+	3206	16	FSM	ENSG00000087274.19	ENST00000503455.6	3206	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	362.775081834461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACCCCACAGTAGAGCA	23	True	NA	NA	False	NA	NA	NA	2843986	2929327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926638_2926676_2928170
transcript_14270.known	chr1	+	727	2	FSM	ENSG00000160688.19	ENST00000492620.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCGGACACTGCGC	-11	True	NA	NA	False	NA	NA	NA	154983337	154988132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154983398_154987465
transcript_142704.nic	chr4	+	2330	15	NIC	ENSG00000087274.19	novel	3107	16	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	599	junction_14	122.586766439622	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTCCAGGCAAGTCC	-37	True	NA	NA	False	NA	NA	NA	2843836	2928431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_142705.nic	chr4	+	3961	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	599	junction_14	122.586766439622	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	-37	True	NA	14	True	AATAAA	-14	NA	2843836	2930062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_142709.known	chr4	+	4045	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_10	264.053565994261	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	-17	True	NA	25	True	AATAAA	-25	NA	2843856	2930073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_14271.known	chr1	+	2189	7	FSM	ENSG00000160688.19	ENST00000292180.8	2189	7	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	133.821709748456	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	-5	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_14272.known	chr1	+	2656	4	FSM	ENSG00000160688.19	ENST00000368433.5	2656	4	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	172.801105963539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	154983351	154991206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158
transcript_142729.known	chr4	+	3059	7	FSM	ENSG00000087274.19	ENST00000508684.5	3059	7	0	0	0	0	multi-exon	FALSE	canonical	3	994	junction_3	31.8886953149371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCACATCATCAGACAC	-17	True	NA	NA	False	NA	NA	NA	2843856	2900313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183
transcript_142731.known	chr4	+	3787	14	FSM	ENSG00000087274.19	ENST00000398129.5	3787	14	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_13	126.100598518586	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCAGTTTTATAT	7816	False	NA	28	True	AATAAA	-28	NA	2875895	2930076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_142739.known	chr4	-	1589	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	210.458362205502	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTTTGTTTTATACC	6	True	NA	-26	True	AATAAA	-1	NA	2934816	2930582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_142753.known	chr4	-	1717	13	FSM	ENSG00000109736.15	ENST00000355443.9	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_12	114.770059975007	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	-3	True	NA	-10	True	AATAAA	-17	NA	2934825	2930566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_142767.nic	chr4	-	1883	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	-44	0	intron_retention	FALSE	canonical	3	409	junction_11	117.058931262974	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	7560	False	NA	-4	True	AATAAA	-23	NA	2934878	2930560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_142789.known	chr4	-	1573	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	226.644221867192	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGGTTTCTGATGAT	-12	True	NA	15	True	TTTAAA	-4	NA	2934834	2930610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_14285.nnic	chr1	+	3603	4	NNC	ENSG00000160685.14	novel	3594	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	14.9666295470958	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	882	False	NA	4	True	AAGAAA	-20	NA	155002630	155018522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_155002670_155002842_155002944_155014654_155015815_155016219
transcript_14286.known	chr1	+	3594	4	FSM	ENSG00000160685.14	ENST00000368426.3	3594	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.6381816969859	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	3	True	NA	4	True	AAGAAA	-20	NA	155002656	155018522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155002687_155002842_155002944_155014654_155015815_155016219
transcript_142868.known	chr4	-	2173	12	FSM	ENSG00000109736.15	ENST00000329687.8	2173	12	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_9	78.0164212423966	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAAGTGCCTTTCGCCA	7980	False	NA	-11	True	AATAAA	-16	NA	2934458	2930567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_142869.known	chr4	-	1776	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_8	79.7095351887088	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	8491	False	NA	-4	True	AATAAA	-23	NA	2933947	2930560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_142870.nnic	chr4	-	3428	19	NNC	ENSG00000087269.16	novel	3556	18	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3128664136113	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	NA	False	NA	-25	True	TATAAA	-6	NA	2963506	2937935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_2938419_2938646_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_142874.nnic	chr4	-	3086	19	NNC	ENSG00000087269.16	novel	2889	19	NA	NA	-24	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.3128664136113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAATGAAACAAGTTTG	66	False	2963454	27	True	NA	NA	NA	2963430	2937947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_2938288_2938769_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_142880.nnic	chr4	-	3156	19	NNC	ENSG00000087269.16	novel	2889	19	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3128664136113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTCTGGGATCGGGAAT	-34	True	NA	-17	True	AATAGA	-15	NA	2963414	2938115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_2938419_2938646_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_142881.known	chr4	-	3556	18	FSM	ENSG00000087269.16	ENST00000416614.7	3556	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	14.4705882352941	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-26	True	NA	-25	True	TATAAA	-6	NA	2963406	2937935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_142887.known	chr4	-	2535	17	FSM	ENSG00000087269.16	ENST00000398071.4	2535	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	37.0185236570828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	47	True	NA	-14	True	AATAGA	-18	NA	2963333	2938112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2938328_2939538_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_142894.known	chr4	+	2541	5	FSM	ENSG00000249673.8	ENST00000658490.1	2541	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.06828373317832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGCCACACCAGCAG	-13	True	NA	-5	True	AATAAA	-8	NA	2934906	2940497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2936891_2937751_2937845_2937974_2938143_2938692_2938793_2940301
transcript_142897.known	chr4	+	1360	5	FSM	ENSG00000249673.8	ENST00000507999.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	7.11951543294907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCAGCAGGAAGTGG	20	True	NA	2	True	AATAAA	-15	NA	2934939	2940504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2935736_2937751_2937845_2937974_2938143_2938692_2938793_2940301
transcript_142899.nic	chr4	-	928	5	ISM	ENSG00000087269.16	ENST00000398071.4	2535	17	-173	15404	-100	-15404	5prime_fragment	FALSE	canonical	3	149	junction_3	10.7558123821495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGTGGGAGCCAAGTA	NA	False	NA	NA	False	AAAAAG	-7	NA	2963506	2953516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_142900.known	chr4	+	3023	4	FSM	ENSG00000249673.8	ENST00000662831.1	3023	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGATGTAACCTTCGA	220	False	NA	NA	False	NA	NA	NA	2935139	2940351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2937845_2937974_2938143_2938692_2938793_2940301
transcript_142904.known	chr4	+	2136	2	FSM	ENSG00000125388.20	ENST00000503518.2	2136	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCCCTCCCTCTCTGGTC	29	False	NA	NA	False	AATAGA	-16	NA	2963633	2966889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2964123_2965242
transcript_142906.nic	chr4	+	1471	10	ISM	ENSG00000197386.14	ENST00000680291.1	7184	41	-6	78515	-6	-531	5prime_fragment	FALSE	canonical	3	20	junction_1	7.22820265212915	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGATTATTTCAGAAATCA	-8	True	NA	NA	False	AAGAAA	-8	NA	3074674	3122935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227_3121433_3122888
transcript_14291.known	chr1	+	3777	3	FSM	ENSG00000160685.14	ENST00000535420.6	3606	3	-172	1	0	0	multi-exon	FALSE	canonical	3	28	junction_1	6	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	881	False	NA	4	True	AAGAAA	-20	NA	155002629	155018522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155002944_155014654_155015815_155016219
transcript_142923.nic	chr4	+	3397	15	NIC	ENSG00000159788.20	novel	4753	18	NA	NA	-25	-81	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	13.0009811246722	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGACTGGCTTACAAC	-30	True	NA	19	True	AATAAA	-13	NA	3292995	3432169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_3293100_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3430406
transcript_142927.known	chr4	+	1530	8	FSM	ENSG00000159788.20	ENST00000506631.5	1530	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	11.8010722446076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTTCTTCGCACATC	2	True	NA	NA	False	GGGGCT	-21	NA	3293027	3418119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_3293100_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387
transcript_14293.nnic	chr1	+	3987	3	NNC	ENSG00000160685.14	novel	2129	2	NA	NA	5618	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	319	False	NA	4	True	AAGAAA	-20	NA	155008462	155018522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_155008987_155014654_155015815_155016219
transcript_142937.known	chr4	-	10446	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	0	0	0	multi-exon	TRUE	canonical	3	904	junction_4	46.5639783699015	1830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTCTTTGATCCAT	-1	True	NA	-14	True	NA	NA	NA	3532422	3503611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
transcript_142955.known	chr4	-	462	5	FSM	ENSG00000251669.6	ENST00000512092.5	462	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAGCAGCTCCGAGGGAA	387	False	NA	NA	False	NA	NA	NA	3955043	3947904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_3948008_3948089_3948221_3951138_3951220_3953110_3953174_3954959
transcript_142960.known	chr4	-	741	4	FSM	ENSG00000251669.6	ENST00000510565.5	741	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.7480157480236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTTACTGTGCAGCAGG	22	False	NA	NA	False	NA	NA	NA	3955408	3942910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_3943373_3948089_3948221_3953110_3953174_3955323
transcript_142967.known	chr4	-	624	3	FSM	ENSG00000251669.6	ENST00000507301.5	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGCGACACCTGGA	67	False	NA	NA	False	NA	NA	NA	3955363	3942851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_3943373_3953110_3953174_3955323
transcript_142971.nnic	chr4	+	630	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	AATAAA	-22	NA	3927750	3933044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_3927996_3932659
transcript_142975.known	chr4	-	2276	2	FSM	ENSG00000284727.1	ENST00000641316.1	2276	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAAAATTTCTCTCTT	NA	False	NA	-14	True	NA	NA	NA	4107583	4048210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4050183_4107279
transcript_142976.known	chr4	-	1737	5	FSM	ENSG00000132406.12	ENST00000254742.6	1737	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	137.190333114254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	5	True	NA	-6	True	AATAAA	-17	NA	4248212	4235541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4247600
transcript_142977.known	chr4	-	1243	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	42.9592830480212	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-6	True	NA	-6	True	AATAAA	-17	NA	4248223	4235541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_142980.nnic	chr4	-	2079	5	NNC	ENSG00000132406.12	novel	1243	5	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	128.967050055431	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	NA	False	NA	-6	True	AATAAA	-17	NA	4248238	4235541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_4237078_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_142982.known	chr4	-	1554	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	31.6290224592603	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	6	True	NA	0	True	AATAAA	-26	NA	4290154	4267700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_142984.nic	chr4	-	886	7	ISM	ENSG00000145220.14	ENST00000343470.9	1554	10	-48	6886	-48	-6883	5prime_fragment	FALSE	canonical	3	317	junction_1	20.1197802064425	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTAAAGTTAGAAAACCA	NA	False	NA	61	True	AAGAAA	-38	NA	4290202	4274586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_142985.known	chr4	+	2886	8	FSM	ENSG00000168826.16	ENST00000337872.9	2886	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	8.58332507759989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	0	True	NA	NA	False	AATAAA	-18	NA	4290250	4321783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_142987.known	chr4	+	2520	7	FSM	ENSG00000168826.16	ENST00000503703.5	2520	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.18021974284601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTCCTCTAGCATTTT	0	True	NA	NA	False	AATAAA	-21	NA	4290250	4321786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4290353_4299926_4300098_4302310_4303092_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_142988.nic	chr4	+	2671	6	NIC	ENSG00000168826.16	novel	2886	8	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	7.72010362624751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	-30	True	NA	NA	False	AATAAA	-18	NA	4290220	4321783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4320639
transcript_142991.known	chr4	-	2158	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	23.7915951545919	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	3	True	NA	NA	False	AATAAA	-20	NA	4542048	4418967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
transcript_142997.known	chr4	+	4172	9	FSM	ENSG00000168824.15	ENST00000421177.6	4172	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	113.318067292908	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	44	False	NA	12	True	AATAAA	-14	NA	4348139	4419058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4348472_4380982_4381074_4385059_4385202_4385472_4385556_4385856_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_14300.known	chr1	+	2894	23	FSM	ENSG00000143537.14	ENST00000472434.5	2894	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	36.1862719963211	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTCCCCAGAGTTTGT	34	True	NA	23	True	AATAAA	-14	NA	155051353	155062768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055786_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155061976_155062244_155062370_155062459
transcript_143002.known	chr4	+	2254	5	FSM	ENSG00000168824.15	ENST00000433139.6	2254	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	51.8814754994497	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTACATGTAACTT	-3	True	NA	-47	True	NA	NA	NA	4386537	4418999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4386644_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_14301.known	chr1	+	3091	23	FSM	ENSG00000143537.14	ENST00000526491.5	3091	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_21	35.0177050850207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155062118_155062244_155062370_155062459
transcript_143011.known	chr4	+	6201	5	FSM	ENSG00000247708.8	ENST00000656969.1	6201	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	8.98262211161084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATACTTGATGCCAAAT	-13	True	NA	NA	False	AATAAA	-17	NA	4542142	4710914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649110_4649369_4649543_4705672
transcript_143012.known	chr4	+	3048	5	FSM	ENSG00000247708.8	ENST00000664571.1	3048	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.65336728815391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATATCTCATGTGAAGG	NA	False	NA	NA	False	NA	NA	NA	4542130	4731906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649110_4649372_4649543_4729826
transcript_143018.known	chr4	+	1555	4	FSM	ENSG00000247708.8	ENST00000499430.7	1555	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.0453610171873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATCCATCCCTGGAC	-4	True	NA	NA	False	NA	NA	NA	4542191	4730211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649543_4729826
transcript_143020.known	chr4	+	2590	3	FSM	ENSG00000247708.8	ENST00000659678.1	2590	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTAAACCTCTTTCTCTT	17	True	NA	-21	True	NA	NA	NA	4542172	4552475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4550508
transcript_143024.known	chr4	+	3167	3	FSM	ENSG00000247708.8	ENST00000663324.1	3167	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAAAAATTTCATGATG	-13	True	NA	NA	False	NA	NA	NA	4542142	4562907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4560393
transcript_143026.known	chr4	+	1048	1	FSM	ENSG00000280310.1	ENST00000624794.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTCTTCATAAATTAC	NA	False	NA	-10	True	ATTAAA	-2	NA	4820404	4821452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4820400_4821500
transcript_143027.nnic	chr4	-	1130	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	18.2208671582886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	1	True	NA	0	True	AATAAA	-21	NA	5019484	5014585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018356_5019292
transcript_143028.known	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	8.48528137423857	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-2	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
transcript_143029.known	chr4	+	3535	12	FSM	ENSG00000152953.13	ENST00000282908.10	3535	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	3.06944418475166	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTTCTCACCACTTTG	-28	True	NA	13	True	AATAAA	-13	NA	5051479	5500989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_5051916_5139904_5139961_5168298_5168451_5331219_5331394_5398206_5398245_5416844_5416935_5446672_5446777_5456806_5456924_5460102_5460229_5466702_5466835_5468005_5468071_5498944
transcript_14303.known	chr1	+	2946	23	FSM	ENSG00000143537.14	ENST00000449910.6	2946	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_19	25.1570275083892	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155061903_155061976_155062244_155062370_155062459
transcript_143031.known	chr4	-	4079	23	FSM	ENSG00000173040.13	ENST00000509670.1	4079	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	10.548295071983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGTTTGTGTGTTTATA	NA	False	NA	NA	False	NA	NA	NA	5709063	5562788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640521_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708046_5708141_5708828
transcript_143032.known	chr4	-	4382	22	FSM	ENSG00000173040.13	ENST00000344408.10	4382	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	5.11677690501468	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTATTACAAAACCCA	-2	True	NA	NA	False	AATAAA	-16	NA	5708559	5562438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708285
transcript_143033.known	chr4	-	4828	22	FSM	ENSG00000173040.13	ENST00000310917.6	4828	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_21	6.83229625446991	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTATTACAAAACCCA	NA	False	NA	NA	False	AATAAA	-16	NA	5709548	5562438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708828
transcript_143045.known	chr4	-	3081	14	FSM	ENSG00000072832.15	ENST00000511535.1	3081	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	170.979807797752	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTAGGGCACTTTCA	5369	False	NA	-24	True	AATAAA	-20	NA	5887813	5820783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5887388
transcript_143046.known	chr4	-	2911	14	FSM	ENSG00000072832.15	ENST00000397890.6	2911	14	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	43.689192738367	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTAGGGCACTTTCAT	-19	True	NA	-23	True	AATAAA	-21	NA	5888481	5820782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5888227
transcript_143047.known	chr4	-	2764	14	FSM	ENSG00000072832.15	ENST00000512574.1	2764	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	167.622109513134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGTCCACACTAGAAAG	2991	False	NA	NA	False	NA	NA	NA	5890191	5821242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5889624
transcript_143048.known	chr4	-	3174	14	FSM	ENSG00000072832.15	ENST00000324989.12	3174	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_13	161.17765566725	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGGTGGTGTCTGGA	-3	True	NA	-4	True	AATAAA	-40	NA	5893086	5820763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5892588
transcript_143066.known	chr4	-	2605	14	FSM	ENSG00000152969.20	ENST00000473053.5	2605	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.2182690023994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	-14	True	NA	-2	True	AATAAA	-18	NA	6200555	6053756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6054149_6054747_6054804_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
transcript_143069.known	chr4	-	2585	13	FSM	ENSG00000152969.20	ENST00000282924.9	2585	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	9.78199877325692	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	NA	False	NA	-2	True	AATAAA	-18	NA	6200591	6053756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
transcript_143070.nic	chr4	-	2111	12	NIC	ENSG00000152969.20	novel	2585	13	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	11.168876472273	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	NA	False	NA	-2	True	AATAAA	-18	NA	6200612	6053756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6112721_6112998_6200252
transcript_143072.nic	chr4	-	2546	12	NIC	ENSG00000152969.20	novel	2585	13	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	16.1091319515176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	NA	False	NA	-2	True	AATAAA	-18	NA	6200612	6053756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
transcript_143078.nic	chr4	-	2257	3	ISM	ENSG00000152969.20	ENST00000282924.9	2585	13	-21	50590	-21	-41954	5prime_fragment	FALSE	canonical	3	27	junction_1	11.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCAACACTAAAAGGAGA	NA	False	NA	21	True	TATAAA	-10	NA	6200612	6104346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_6105968_6112721_6112998_6200252
transcript_143080.known	chr4	+	2635	4	FSM	ENSG00000249896.2	ENST00000636374.1	2635	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGTAGATGCACGTGG	NA	False	NA	NA	False	TATAAA	-23	NA	6222218	6234827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6222685_6226925_6227004_6228016_6228140_6232859
transcript_143083.known	chr4	+	3662	8	FSM	ENSG00000109501.15	ENST00000682275.1	3662	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	74.5949607095902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAACCTGCAGCGCTT	0	True	NA	17	True	AATAAA	-7	NA	6269849	6303251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295004_6295190_6300656
transcript_143085.known	chr4	+	3640	8	FSM	ENSG00000109501.15	ENST00000226760.5	3640	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	28.8083037915622	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTTTCCTTCCTTTCTTT	0	True	NA	31	True	AATAAA	-21	NA	6269849	6303265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300656
transcript_14309.known	chr1	+	2877	22	FSM	ENSG00000143537.14	ENST00000355956.6	2877	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_20	33.1719904796344	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155062244_155062370_155062459
transcript_143093.known	chr4	+	2882	7	FSM	ENSG00000109501.15	ENST00000506362.2	2882	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	79.0599280433661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAACCTCCACAGTAGCA	93	False	NA	14	True	TTTAAA	-17	NA	6269976	6302871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6270015_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300656
transcript_143094.known	chr4	+	1439	3	FSM	ENSG00000109501.15	ENST00000506588.6	1439	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	34	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGAACCCAGGAAGTG	0	True	NA	NA	False	NA	NA	NA	6269849	6288129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6270015_6277450_6277688_6287092
transcript_143096.known	chr4	+	5129	19	FSM	ENSG00000013288.9	ENST00000285599.8	5129	19	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_12	6.42453822138406	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACTACGGAGGCCAGG	-2	True	NA	NA	False	NA	NA	NA	6575188	6623362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6575349_6576577_6576725_6578392_6578499_6586995_6587169_6589044_6589161_6593172_6593351_6594533_6594733_6597112_6597304_6598197_6598355_6600622_6600757_6605054_6605330_6609106_6609299_6609797_6610051_6610879_6610991_6611085_6611279_6614217_6614356_6617379_6617493_6619926_6620045_6621187
transcript_143098.known	chr4	+	2049	3	FSM	ENSG00000179010.16	ENST00000320912.8	2049	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	183	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	6285	False	NA	21	True	AATAAA	-21	NA	6640090	6642729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6640709_6640827_6641259_6641729
transcript_143099.known	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	-4	True	NA	21	True	AATAAA	-21	NA	6640684	6642729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6641259_6641729
transcript_1431.nic	chr1	-	768	4	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-338	16738	-338	-10704	5prime_fragment	FALSE	canonical	3	83	junction_3	8.05536398239638	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACGTAGGCATCGTAG	NA	False	NA	-15	True	AAAAAG	-30	NA	1659350	1652475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1652567_1655368_1655485_1657374_1657499_1658913
transcript_143100.known	chr4	+	1605	2	FSM	ENSG00000170846.17	ENST00000444232.3	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	9	True	NA	9	True	AATAAA	-16	NA	6674087	6676047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6674638_6674992
transcript_143101.known	chr4	+	2311	2	FSM	ENSG00000170846.17	ENST00000307533.10	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	2	True	NA	9	True	AATAAA	-16	NA	6673450	6676047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6674707_6674992
transcript_143102.known	chr4	+	2045	1	FSM	ENSG00000170846.17	ENST00000635031.1	2045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGTAAGGTAAATAAAC	15	False	NA	-25	True	NA	NA	NA	6673968	6676013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6674000_6676000
transcript_143103.known	chr4	-	1578	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-7	True	NA	-14	True	AATAAA	-16	NA	6709865	6707700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6708644_6709230
transcript_143104.known	chr4	-	2127	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	31	False	NA	-14	True	AATAAA	-16	NA	6709827	6707700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6707700_6709800
transcript_143105.known	chr4	+	1491	1	FSM	ENSG00000186222.5	ENST00000320776.5	1491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTACGTATTTCCTTG	3	True	NA	51	True	AATAGA	-39	NA	6716173	6717664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6716200_6717700
transcript_143107.known	chr4	+	7771	9	FSM	ENSG00000170871.12	ENST00000425103.5	7771	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	5.13413819447821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGTTCCATCAAGTT	3	True	NA	19	True	AATAAA	-22	NA	6782731	6884170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6876659_6876758_6880786
transcript_143109.nic	chr4	+	1219	6	ISM	ENSG00000170871.12	ENST00000425103.5	7771	9	-82	23030	8	201	5prime_fragment	FALSE	canonical	3	27	junction_3	4.24264068711928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAGAAGGAAAACAAATTTA	12	False	NA	NA	False	NA	NA	NA	6782649	6861140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900
transcript_14311.nic	chr1	+	2905	22	NIC	ENSG00000143537.14	novel	2946	23	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_20	31.5642094741479	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	NA	False	NA	30	True	AATAAA	-21	NA	155051271	155062775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155062244_155062370_155062459
transcript_143111.nic	chr4	+	4838	6	ISM	ENSG00000170871.12	ENST00000425103.5	7771	9	-82	19411	8	3820	5prime_fragment	FALSE	canonical	3	27	junction_3	4.24264068711928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGTATTATGCTTAAAG	12	False	NA	NA	False	NA	NA	NA	6782649	6864759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900
transcript_143118.known	chr4	+	4887	14	FSM	ENSG00000132405.19	ENST00000448507.5	4887	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	86.4933557663014	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACCATCGTTTGTTTA	188	False	NA	27	True	AATAAA	-24	NA	6909443	7033118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6909506_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_143119.known	chr4	+	4947	14	FSM	ENSG00000132405.19	ENST00000409757.9	4947	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	73.7825848184055	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	17	True	NA	23	True	AATAAA	-20	NA	6909825	7033114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6909952_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_143124.known	chr4	+	4201	13	FSM	ENSG00000132405.19	ENST00000410031.5	4201	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	85.5190037360118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	33	False	NA	23	True	AATAAA	-20	NA	6954219	7033114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6954339_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_143129.known	chr4	+	4149	12	FSM	ENSG00000132405.19	ENST00000451522.6	4149	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	42.5361295142093	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	-1	True	NA	23	True	AATAAA	-20	NA	6987161	7033114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_143138.nic	chr4	+	2111	2	ISM	ENSG00000132405.19	ENST00000409757.9	4947	14	-68	107825	-68	1518	5prime_fragment	FALSE	canonical	3	100	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGTGATCTGCTCCATA	295	False	NA	NA	False	AAAACA	-15	NA	6909757	6925289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_6909952_6923372
transcript_143139.known	chr4	-	1111	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGAGTGGATCTCATG	1	True	NA	-12	True	ATTAAA	-14	NA	6987036	6985925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6985900_6987000
transcript_14314.known	chr1	+	2874	22	FSM	ENSG00000143537.14	ENST00000359280.8	2874	22	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_19	26.3834449570266	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061903_155061976_155062244_155062370_155062459
transcript_143142.known	chr4	+	4369	2	FSM	ENSG00000173011.12	ENST00000310074.8	4369	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCACCGCTTGCTTCT	5	True	NA	NA	False	ATTAAA	-17	NA	7043371	7057952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_7043850_7054061
transcript_143144.known	chr4	-	2153	1	FSM	ENSG00000173013.6	ENST00000310085.6	2153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGTCCCGAGACACT	-33	True	NA	NA	False	ATTAAA	-19	NA	7043001	7040848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7040800_7043000
transcript_143145.known	chr4	-	2653	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	14.8548533034381	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCCCCTCATTGACT	-4	True	NA	-1	True	AGTAAA	-25	NA	7068064	7058894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
transcript_143150.known	chr4	-	7516	17	FSM	ENSG00000196526.11	ENST00000358461.6	7516	17	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_9	10.7163353694255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCGGTGTCTTCACTGC	NA	False	NA	-4	True	AATAAA	-13	NA	7939926	7758714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7763792_7768843_7769009_7772819_7773011_7774738_7774904_7778761_7778877_7786193_7786312_7793680_7793827_7800441_7800654_7809613_7809764_7816017_7816100_7819075_7819172_7838523_7838704_7843138_7843351_7855465_7855575_7868621_7868720_7871951_7872081_7939655
transcript_143156.nic	chr4	-	1873	9	ISM	ENSG00000196526.11	ENST00000358461.6	7516	17	15	50338	15	386	5prime_fragment	FALSE	canonical	3	36	junction_1	10.3191266587827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCTTCCTTATCACGTC	NA	False	NA	NA	False	TATAAA	-21	NA	7939911	7809052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_7809764_7816017_7816100_7819075_7819172_7838523_7838704_7843138_7843351_7855465_7855575_7868621_7868720_7871951_7872081_7939655
transcript_143160.known	chr4	-	1680	18	FSM	ENSG00000163995.21	ENST00000505872.5	1680	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.41751612538977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCCAGCCTGCCCCAC	184	False	NA	NA	False	AAGAAA	-16	NA	8158689	7966989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7967104_7983263_7983345_7983546_7983555_7984838_7984894_7992865_7992928_8008058_8008198_8009049_8009103_8029655_8029777_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
transcript_143162.known	chr4	-	2472	18	FSM	ENSG00000163995.21	ENST00000361581.9	2472	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.6261869182204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATAGCCTACTTAAACG	119	False	NA	NA	False	ATTAAA	-1	NA	8158754	7966301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7967104_7983263_7983345_7983546_7983555_8008058_8008198_8009049_8009103_8019617_8019672_8020201_8020304_8029655_8029777_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
transcript_143164.known	chr4	-	2291	16	FSM	ENSG00000163995.21	ENST00000407564.7	2291	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5.11468474101777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTAGATGCCTACACAAT	90	False	NA	NA	False	NA	NA	NA	8158783	7966358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7967104_7983263_7983345_7983546_7983555_8008058_8008201_8009049_8009103_8029655_8029777_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
transcript_143171.known	chr4	+	2539	9	FSM	ENSG00000170801.10	ENST00000307358.7	2539	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	6.16441400296898	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCAGCCAGCAGGGC	0	True	NA	10	True	AATAAA	-14	NA	8269753	8307098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8270354_8282436_8282537_8286560_8286784_8291369_8291565_8292320_8292354_8294086_8294202_8302462_8302512_8304183_8304280_8305970
transcript_143176.known	chr4	-	2253	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_17	33.3929110020422	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTGGCACACATTCAG	7475	False	NA	NA	False	NA	NA	NA	8428486	8366960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_143185.nnic	chr4	-	2579	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4696	108	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_17	42.6491277388625	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGATTCATCTAGATTT	4698	False	NA	-23	True	AGTAAA	-34	NA	8436027	8366603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
transcript_143186.known	chr4	-	2872	18	FSM	ENSG00000087008.16	ENST00000356406.10	2872	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	81.865363348995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATGATCTGTTTGTCC	2	True	NA	-5	True	NA	NA	NA	8440723	8366281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8440647
transcript_143192.nnic	chr4	-	2471	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4696	0	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_17	42.6491277388625	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	4698	False	NA	-25	True	AAGAAA	-24	NA	8436027	8366711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
transcript_143210.known	chr4	-	2374	17	FSM	ENSG00000087008.16	ENST00000413009.6	2374	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_16	104.272910402223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	2	True	NA	-25	True	AAGAAA	-24	NA	8440723	8366711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_8367081_8370907_8370995_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8440647
transcript_143216.nic	chr4	-	2459	17	NIC	ENSG00000087008.16	novel	2374	17	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_2	74.0083399016624	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	7450	False	NA	-25	True	AAGAAA	-24	NA	8428511	8366711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_8367081_8370907_8370995_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_143252.nnic	chr4	+	3123	11	NNC	ENSG00000155275.19	novel	2874	11	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	24.4245777855012	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGGGCCACTCTAAGT	547	False	NA	15	True	AATAAA	-17	NA	8440766	8476552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475529
transcript_143253.known	chr4	+	2874	11	FSM	ENSG00000155275.19	ENST00000389737.5	2874	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.1	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	-15	True	NA	18	True	AATAAA	-20	NA	8440776	8476555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
transcript_143254.nic	chr4	+	2366	11	NIC	ENSG00000155275.19	novel	2874	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	22.4588512618077	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGCTCTTTATTGCAA	547	False	NA	21	True	AATAAA	-33	NA	8440766	8493531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8493265
transcript_14326.known	chr1	+	2799	21	FSM	ENSG00000143537.14	ENST00000271836.10	2799	21	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_19	24.131462864899	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	-14	True	NA	30	True	AATAAA	-21	NA	155051305	155062775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155062244_155062370_155062459
transcript_143260.nic	chr4	-	1615	11	ISM	ENSG00000087008.16	ENST00000503233.5	2253	18	-25	25232	-25	-10639	5prime_fragment	FALSE	canonical	3	233	junction_10	37.1630192530155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCACCCCCGTTCATT	7450	False	NA	-3	True	AATAAA	-17	NA	8428511	8392192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_143278.known	chr4	+	770	2	FSM	ENSG00000155275.19	ENST00000532937.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCATTCTTTAAACAC	0	True	NA	NA	False	NA	NA	NA	8436139	8439301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8436400_8438791
transcript_143280.known	chr4	+	4157	3	FSM	ENSG00000155275.19	ENST00000511366.2	4157	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGCTCTTTATTGCAA	222	False	NA	21	True	AATAAA	-33	NA	8473515	8493531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8473645_8475771_8479534_8493265
transcript_143290.known	chr4	+	2163	11	FSM	ENSG00000109625.19	ENST00000360986.9	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	32.63571663071	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	-13	True	NA	31	True	ATTAAA	-18	NA	8592764	8619752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8592922_8599452_8599486_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_143293.known	chr4	+	2464	11	FSM	ENSG00000109625.19	ENST00000515606.1	2464	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	53.4419311028335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTGGAATGAGAGGATC	74	False	NA	30	True	ATTAAA	-17	NA	8592725	8619751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8592922_8599452_8599583_8600956_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_143295.nic	chr4	+	2312	11	NIC	ENSG00000109625.19	novel	2163	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	52.9051982323098	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	61	False	NA	31	True	ATTAAA	-18	NA	8592712	8619752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_8592922_8599452_8599583_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_143297.nic	chr4	+	2319	11	NIC	ENSG00000109625.19	novel	2163	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	52.6373441579265	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	58	False	NA	31	True	ATTAAA	-18	NA	8592709	8619752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_8592922_8599452_8599587_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_1433.nic	chr1	+	2034	3	ISM	ENSG00000189409.14	ENST00000356026.10	1248	8	-30	3	-20	0	intron_retention	FALSE	canonical	3	49	junction_1	17	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCCTCGCTCATTC	12	False	NA	NA	False	GATAAA	-13	NA	1632142	1634651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_1632375_1632782_1632914_1632980
transcript_143307.known	chr4	+	2136	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	48.297688005397	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	-22	True	NA	28	True	ATTAAA	-15	NA	8592755	8619749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_143314.known	chr4	+	4343	3	FSM	ENSG00000155269.12	ENST00000382487.5	4343	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCATTTCCATGGA	-3	True	NA	NA	False	AATAAA	-14	NA	8580391	8590023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8581651_8582530_8582645_8587053
transcript_143324.nnic	chr4	+	637	2	Genic_Genomic	ENSG00000284648.1	novel	219	1	NA	NA	-118	6144	multi-exon	FALSE	canonical	3	20	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTGAATTTTATTT	NA	False	NA	6	True	AATAAA	-14	NA	9532310	9538791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr4_+_9532648_9538491
transcript_143333.known	chr4	-	3142	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	363.346190404733	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	22	False	NA	-8	True	ATTAAA	-15	NA	10116949	10074339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
transcript_143364.known	chr4	-	2722	12	FSM	ENSG00000071127.17	ENST00000382451.6	2722	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	526.01500465668	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	22	False	NA	-8	True	ATTAAA	-15	NA	10116949	10074339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_143370.known	chr4	-	559	2	FSM	ENSG00000071127.17	ENST00000509600.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTTCTGTCTACGGTCA	3	True	NA	NA	False	NA	NA	NA	10116868	10115893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10116235_10116650
transcript_143371.known	chr4	-	1691	12	FSM	ENSG00000071127.17	ENST00000502702.5	1691	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	526.01500465668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGGAGCATAACTAAAA	20	True	NA	-5	True	AATAAA	-17	NA	10116727	10075148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_143372.known	chr4	-	6954	3	FSM	ENSG00000178163.8	ENST00000326756.4	6954	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAACGTTATGCAGGTG	-15	True	NA	-11	True	AATAAA	-28	NA	10457426	10439879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10446540_10454804_10454989_10457316
transcript_143373.known	chr4	-	527	2	FSM	ENSG00000178163.8	ENST00000507515.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTACAGGGAAGGACGGTA	6	True	NA	NA	False	NA	NA	NA	10457405	10446101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10446540_10457316
transcript_143374.known	chr4	-	4196	2	FSM	ENSG00000178163.8	ENST00000503068.1	4196	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTATTCTTTTCTGT	1	True	NA	NA	False	AATAAA	-29	NA	10457410	10450886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10454989_10457316
transcript_143377.nnic	chr4	+	1966	2	Genic_Genomic	ENSG00000250896.1	novel	918	1	NA	NA	-3374	870	multi-exon	FALSE	canonical	2	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGCAACATTTAAAATAAT	-9	True	NA	NA	False	ATTAAA	-7	NA	11368600	11373762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr4_+_11368662_11371857
transcript_143378.known	chr4	-	7160	2	FSM	ENSG00000002587.10	ENST00000002596.6	7160	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGATGTCTCTTTCTT	-8	True	NA	NA	False	GATAAA	-19	NA	11428894	11393149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_11400114_11428698
transcript_143384.known	chr4	-	1785	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	112.979138403007	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-10	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_143385.known	chr4	-	1787	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	158.384188037847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	611	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_143386.known	chr4	-	1679	7	FSM	ENSG00000157869.16	ENST00000630951.1	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	146.137397297505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	611	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_143388.known	chr4	-	1690	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	41.7708697007323	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-10	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_143389.known	chr4	-	1551	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	134.076992806372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-1	True	NA	-11	True	AATAAA	-14	NA	13484331	13367723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_143392.known	chr4	-	10567	26	FSM	ENSG00000038219.13	ENST00000040738.10	10567	26	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_24	35.0765106588441	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTGGTAAGAATTTTA	-29	True	NA	-19	True	TATAAA	-21	NA	13627725	13568737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
transcript_143394.known	chr4	+	4989	35	FSM	ENSG00000048342.18	ENST00000506643.5	4989	35	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	7.93403818605105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGCAAAGTGTTCTA	13	False	NA	5	True	AATAAA	-17	NA	15479203	15601549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
transcript_143399.nic	chr4	+	980	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-24	28604	-12	0	5prime_fragment	FALSE	canonical	3	29	junction_5	6.01996677731696	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	1	True	NA	9	True	ATTAAA	-37	NA	15479191	15511672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_143400.known	chr4	+	1521	5	FSM	ENSG00000048342.18	ENST00000515124.6	1521	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.4790199457749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTCATATGGCTGTTT	NA	False	NA	5	True	AATAAA	-14	NA	15469864	15482259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15481196
transcript_143401.known	chr4	+	754	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGATATTC	-9	True	NA	NA	False	AATAAA	-18	NA	15479215	15481713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15479329_15480703_15480828_15481196
transcript_143409.known	chr4	-	2837	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	149.142381635805	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-39	True	NA	-1	True	AATAAA	-28	NA	15655382	15605005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
transcript_143410.known	chr4	-	3488	11	FSM	ENSG00000118564.15	ENST00000341285.8	3488	11	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_9	31.8447797919847	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATGTTCTGATTG	-14	True	NA	NA	False	GATAAA	-1	NA	15655357	15604380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15655203
transcript_143411.nic	chr4	-	3017	11	NIC	ENSG00000118564.15	novel	2951	12	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_10	168.593267955752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	29	False	15681616	-1	True	AATAAA	-28	NA	15681587	15605005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15681279
transcript_143418.known	chr4	+	607	4	FSM	ENSG00000237765.8	ENST00000515697.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	71.7975548949189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATCAATAATTGAGCTA	-6	True	NA	NA	False	AAAACA	-34	NA	15681732	15688613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235_15686463_15687000_15687149_15688550
transcript_143420.known	chr4	+	578	4	FSM	ENSG00000237765.8	ENST00000503600.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	16.6599986661331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATTGAGCTAAACTTG	-3	True	NA	NA	False	AAAACA	-40	NA	15681834	15688619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681969_15686235_15686463_15687000_15687149_15688550
transcript_143421.known	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	11.0252236056942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	23	False	NA	12	True	AATAAA	-14	NA	15681860	15688972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
transcript_143423.known	chr4	+	1136	4	FSM	ENSG00000237765.8	ENST00000505260.5	1136	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	96.6965471059966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAACAAAAATTTAATGAA	-1	True	NA	136	True	AATAAA	-16	NA	15681755	15689096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235_15686463_15686931_15687149_15688550
transcript_143424.known	chr4	+	800	3	FSM	ENSG00000237765.8	ENST00000507305.5	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	68.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAACACAGCTGCTGAAA	-5	True	NA	NA	False	NA	NA	NA	15681790	15687462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235_15686463_15687000
transcript_143426.known	chr4	+	654	3	FSM	ENSG00000237765.8	ENST00000512855.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	53	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAGTGCAAGACGTTA	-1	True	NA	NA	False	AAAAAG	-4	NA	15681755	15687145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681969_15686235_15686463_15686931
transcript_143427.known	chr4	+	431	3	FSM	ENSG00000237765.8	ENST00000510186.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTAAGTGCAAGAC	68	False	NA	NA	False	NA	NA	NA	15681905	15687141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681969_15686235_15686463_15687000
transcript_143430.known	chr4	+	748	3	FSM	ENSG00000237765.8	ENST00000513053.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTGAACTTATTGAT	10	True	NA	NA	False	ATTAAA	-18	NA	15681805	15687305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15682022_15686235_15686463_15687000
transcript_143432.known	chr4	+	588	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	0	True	NA	-33	True	AATGAA	-2	NA	15681756	15686568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15684849_15684960_15686235
transcript_143433.known	chr4	+	524	3	FSM	ENSG00000237765.8	ENST00000514803.1	524	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	20.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	-15	True	NA	5	True	AATAAA	-16	NA	15681822	15686606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15684885_15684960_15686235
transcript_143437.known	chr4	+	4287	2	FSM	ENSG00000237765.8	ENST00000422728.3	4287	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	-11	True	NA	5	True	AATAAA	-15	NA	15681826	15690447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235
transcript_143438.known	chr4	+	1027	2	FSM	ENSG00000237765.8	ENST00000503617.1	1027	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTGGAATTGTGAAT	0	True	NA	NA	False	AATATA	-25	NA	15681756	15687050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681969_15686235
transcript_143439.known	chr4	+	639	2	FSM	ENSG00000237765.8	ENST00000510032.5	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	-3	True	NA	5	True	AATAAA	-16	NA	15681753	15686606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15682022_15686235
transcript_143440.nnic	chr4	-	930	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-53	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	NA	False	NA	-6	True	ATTAAA	-42	NA	15681732	15667563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_15668041_15681279
transcript_143444.known	chr4	-	4014	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_26	42.5147555311073	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-6	True	NA	-5	True	AATAAA	-16	NA	16083732	15968229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
transcript_143445.known	chr4	-	4349	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_26	28.9711139548859	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTATGTTACTTCCT	NA	False	NA	-3	True	AATAAA	-18	NA	16084378	15968227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_143449.known	chr4	-	4521	14	FSM	ENSG00000169762.17	ENST00000405303.7	4521	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_8	10.1258354904027	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGTCTGATTTTTTT	1	True	NA	NA	False	AATATA	-16	NA	16226471	16160504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16163538_16166632_16166794_16170652_16170730_16174203_16174273_16174669_16174730_16176118_16176229_16179576_16179658_16186534_16186605_16186780_16186879_16188219_16188356_16191360_16191524_16202461_16202581_16213767_16213899_16226258
transcript_143452.known	chr4	-	2476	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	48.8964147458686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	341	False	NA	-13	True	AATAAA	-18	NA	16898594	16501540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_143454.known	chr4	-	2295	8	FSM	ENSG00000169744.13	ENST00000515064.5	2295	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	42.1832735978204	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	4	True	NA	-13	True	AATAAA	-18	NA	16898562	16501540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16502874_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_143456.known	chr4	-	2626	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	51.4265872633118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCAAGTGAATCTGGC	22	True	NA	-18	True	AATAAA	-13	NA	16898634	16501545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_143463.known	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_4	33.4265363645911	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-2	True	NA	-3	True	AATAAA	-17	NA	17512090	17486394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_143469.known	chr4	-	1278	6	FSM	ENSG00000151552.12	ENST00000428702.6	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	177.018191155598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATCACATCTTATAT	2	True	NA	-16	True	AATAAA	-24	NA	17512086	17486526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17511949
transcript_143470.known	chr4	-	1374	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	196.33481606684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGCCTGATTCTGC	-6	True	NA	-6	True	AATAAA	-14	NA	17512069	17486397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_143475.known	chr4	-	601	5	FSM	ENSG00000151552.12	ENST00000508623.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	220.984586566575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCAGAAAAGTCACTAAC	1	True	NA	NA	False	NA	NA	NA	17512087	17487104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17487237_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_143481.known	chr4	+	1876	13	FSM	ENSG00000002549.13	ENST00000606142.5	1876	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_5	42.9213589667843	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTGTCAGAAACAATAAAT	-3	True	NA	-19	True	NA	NA	NA	17577494	17607934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287_17582394_17583482_17583643_17584971_17585137_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
transcript_143486.known	chr4	+	2209	13	FSM	ENSG00000002549.13	ENST00000226299.9	2209	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_5	42.9213589667843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTGGCTCTGATATT	-1	True	NA	17	True	AATAAA	-18	NA	17577197	17607970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287_17582394_17583482_17583643_17584971_17585137_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
transcript_143487.known	chr4	-	6731	18	FSM	ENSG00000047662.5	ENST00000265018.4	6731	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.81877939220474	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAAGGGTAGCACTGATC	-5	True	NA	NA	False	ATTAAA	-41	NA	17781621	17629305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17632626_17633688_17633889_17635008_17635114_17636527_17636646_17639249_17639397_17642055_17642229_17647636_17647792_17652829_17652984_17658349_17658563_17659957_17660088_17664561_17664660_17688423_17688532_17693301_17693413_17704999_17705207_17705751_17705892_17707648_17707785_17708891_17709645_17781158
transcript_143489.known	chr4	+	10858	4	FSM	ENSG00000118579.13	ENST00000237380.12	10858	4	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_3	60.3342541366198	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGATGGATGTGTT	-1	True	NA	17	True	AATAAA	-30	NA	17614640	17634105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600
transcript_1435.known	chr1	+	556	3	FSM	ENSG00000189409.14	ENST00000472264.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCGCCCGCCCCCGCCC	4	True	NA	NA	False	NA	NA	NA	1632162	1633120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1632375_1632709_1632914_1632980
transcript_143507.nnic	chr4	-	2156	3	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	0	1281	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	13	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTAGTTAAGGGGAC	-29	True	NA	NA	False	NA	NA	NA	17810757	17803030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_17804757_17805106_17805226_17810446
transcript_143508.known	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-29	True	NA	0	True	AATAAA	-24	NA	17810757	17800654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17804772_17805106_17805226_17810446
transcript_143511.known	chr4	-	757	2	FSM	ENSG00000163257.11	ENST00000507768.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACAGTGGTATGGGCCA	-30	True	NA	NA	False	AATATA	-19	NA	17810758	17804311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17804757_17810446
transcript_143512.nnic	chr4	-	2061	2	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-8	1281	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTAGTTAAGGGGAC	-38	True	NA	NA	False	NA	NA	NA	17810766	17803030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_17804772_17810446
transcript_143514.nnic	chr4	-	1900	2	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-8	1120	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCGCAGCAGTGC	-38	True	NA	NA	False	AATAAA	-5	NA	17810766	17803191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_17804772_17810446
transcript_143515.known	chr4	-	533	2	FSM	ENSG00000163257.11	ENST00000507731.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCATGTTTTAACC	17	True	NA	-8	True	AATAAA	-22	NA	17810711	17809424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17809693_17810446
transcript_143516.known	chr4	+	4587	21	FSM	ENSG00000109805.10	ENST00000251496.7	4587	21	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_6	45.1622353299745	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTATTCTGAGTATT	-7	True	NA	4	True	AATAAA	-14	NA	17810978	17844865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17840606_17840694_17842309_17842380_17843301
transcript_143524.nic	chr4	+	2856	18	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-69	4735	-69	2969	5prime_fragment	FALSE	canonical	3	304	junction_6	44.6740598815194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATAAAGAATTTGGTGA	181	False	NA	21	True	NA	NA	NA	17810909	17840130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070
transcript_143526.nic	chr4	+	2083	14	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-69	10536	-69	-2832	5prime_fragment	TRUE	canonical	3	304	junction_6	39.4220074901851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGCTTTAAAGGCAATC	181	False	NA	NA	False	AATAAA	-3	NA	17810909	17834329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298
transcript_143527.nic	chr4	+	2152	14	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-69	10467	-69	-2763	5prime_fragment	FALSE	canonical	3	304	junction_6	39.4220074901851	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACACTTCATTGTGAA	181	False	NA	NA	False	ACTAAA	-5	NA	17810909	17834398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298
transcript_143531.known	chr4	+	8053	37	FSM	ENSG00000145147.20	ENST00000504154.6	8053	37	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_30	3.39423530906938	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGTGGTGTTCTTAG	-7	True	NA	12	True	ATTAAA	-20	NA	20251904	20620561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20253995_20256671_20256744_20257867_20257940_20268809_20268882_20467751_20467824_20480715_20480788_20486199_20486272_20488818_20488983_20491760_20491900_20510494_20510567_20511065_20511138_20519381_20519454_20523759_20523904_20524013_20524178_20525148_20525173_20528948_20529100_20531983_20532059_20533571_20533716_20539440_20539585_20541452_20541620_20542493_20542627_20546030_20546100_20548487_20548560_20549056_20549129_20550826_20550899_20553804_20553969_20567261_20567387_20567517_20567616_20568864_20569005_20589643_20589738_20595696_20595835_20596414_20596656_20598264_20598396_20610012_20610168_20616909_20617199_20617438_20617651_20618767
transcript_143533.known	chr4	+	6309	9	FSM	ENSG00000163138.19	ENST00000503585.6	6309	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	7.8491639682198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTTGTTTCAGTAAA	2	True	NA	NA	False	ATTAAA	-17	NA	20700457	20732557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20724807_20724889_20727284
transcript_143535.known	chr4	+	2073	8	FSM	ENSG00000163138.19	ENST00000360916.9	2073	8	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_5	6.73704349860091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGATTTTGTTGTGCT	-5	True	NA	11	True	ATTAAA	-22	NA	20700412	20728357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
transcript_143536.known	chr4	+	987	8	FSM	ENSG00000163138.19	ENST00000508952.5	987	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	10.4178026591454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGTTACTAATGGAAAG	2	True	NA	NA	False	AATAGA	-32	NA	20700457	20727502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700612_20704465_20704534_20704659_20704815_20707802_20707871_20712787_20712923_20713431_20713540_20724807_20724889_20727284
transcript_14354.nnic	chr1	-	1660	4	NNC	ENSG00000232093.1	novel	822	2	NA	NA	-5105	0	intron_retention	FALSE	canonical	2	4	junction_2	4.54606056566195	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTTCAATGCTATTG	3333	False	NA	-4	True	ATTAAA	-22	NA	155051223	155045190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155045854_155045959_155046247_155049268_155049362_155050606
transcript_143540.known	chr4	+	1720	5	FSM	ENSG00000163138.19	ENST00000444671.6	1720	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	9.36416040016402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGCAATTAAAATGTT	18	False	NA	-25	True	NA	NA	NA	20700435	20728321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20713431_20713540_20727284
transcript_143542.known	chr4	-	4577	19	FSM	ENSG00000152990.14	ENST00000334304.10	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_15	34.1971408811387	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-21	True	NA	-1	True	AATAAA	-21	NA	22516066	22387375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
transcript_143550.known	chr4	-	2998	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	1104	junction_5	93.1059077565521	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	-13	True	NA	-28	True	AATAAA	-16	NA	24584554	24527474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_143567.nic	chr4	-	2220	10	ISM	ENSG00000109606.13	ENST00000336812.5	2998	14	-16	12376	-16	-142	5prime_fragment	FALSE	canonical	3	1104	junction_1	103.33381122948	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTTGTAACTGAATTC	32	False	NA	0	True	AATAAA	-18	NA	24584570	24539850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_143572.known	chr4	+	1416	2	FSM	ENSG00000109610.6	ENST00000382120.4	1416	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGCGTCGAGGTCTTGG	-4	True	NA	25	True	ATTAAA	-15	NA	24795572	24800842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_24795652_24799505
transcript_143573.known	chr4	-	3869	12	FSM	ENSG00000181982.19	ENST00000504487.5	3869	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	7.24654377577441	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACAGCTGTCTTTTGTCT	128	False	NA	-5	True	ATTAAA	-18	NA	24912886	24806116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_24808820_24819858_24819976_24822496_24822574_24831505_24831651_24834947_24835033_24836435_24836509_24837227_24837401_24838155_24838273_24853071_24853180_24873680_24873720_24876535_24876698_24912816
transcript_143577.known	chr4	-	5503	11	FSM	ENSG00000109618.13	ENST00000382103.7	5503	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	6.72606868832009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTACGTTATTTTAC	127	False	25160476	-8	True	AATAAA	-41	NA	25160449	25120013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_14358.known	chr1	+	1817	5	FSM	ENSG00000143590.14	ENST00000368408.4	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	9.86154146165801	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	-24	True	NA	NA	False	AATAAA	-17	NA	155078836	155087538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155079070_155085090_155085405_155085876_155085943_155086127_155086206_155086412
transcript_143581.known	chr4	-	5441	10	FSM	ENSG00000109618.13	ENST00000680581.1	5441	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.0384048104053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAGACTGTTTAAAGAT	26	False	NA	-77	True	NA	NA	NA	25160550	25120082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25124226_25125693_25125785_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_143582.known	chr4	-	2547	4	FSM	ENSG00000109618.13	ENST00000681166.1	2547	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGTTTTTTAACTATG	308	False	NA	NA	False	AATGAA	-40	NA	25160268	25154198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25155152_25156036_25156196_25156855_25156975_25158952
transcript_143583.known	chr4	+	3594	10	FSM	ENSG00000038210.14	ENST00000264864.8	3594	10	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	22.973414586817	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-4	True	NA	NA	False	ATTAAA	-18	NA	25234032	25279204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25234432_25252320_25252476_25255064_25255266_25256542_25256675_25259036_25259191_25260523_25260592_25263749_25263850_25268442_25268577_25269143_25269204_25277013
transcript_143585.known	chr4	+	383	2	FSM	ENSG00000281501.1	ENST00000510415.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGTCGGAATACTGG	-16	True	NA	16	True	ATTAAA	-17	NA	25160640	25161687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25160754_25161417
transcript_143587.known	chr4	+	2797	13	FSM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_12	24.0202460899597	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGCTCTCAGTTCTC	-17	True	NA	3	True	ATTAAA	-16	NA	25312773	25370383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021_25365167_25369028
transcript_14359.known	chr1	+	1254	4	FSM	ENSG00000243364.8	ENST00000368409.8	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	8.33999733546454	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	-6	True	NA	35	True	AATAAA	-29	NA	155063739	155069553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068852
transcript_143594.known	chr4	+	2635	29	FSM	ENSG00000053900.11	ENST00000315368.8	2635	29	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_9	32.2250536327351	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCTTCATCTTCTCT	18	True	NA	14	True	AATAAA	-21	NA	25377262	25418498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_143595.known	chr4	+	4115	13	FSM	ENSG00000157765.13	ENST00000382051.8	4115	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	4.83045891539648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTGTTGTTTTTAATT	-1	True	NA	NA	False	AATAAA	-17	NA	25655850	25678748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25655891_25662497_25662613_25662704_25662843_25664201_25664331_25666127_25666272_25667879_25667992_25669646_25669843_25670737_25670834_25671600_25671722_25673086_25673255_25674295_25674413_25674504_25674630_25676134
transcript_143596.known	chr4	+	2162	13	FSM	ENSG00000157765.13	ENST00000504570.5	2162	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	4.61579414137541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGGGGGATGGTCCTTG	83	False	NA	NA	False	NA	NA	NA	25655821	25676769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25655891_25662497_25662613_25662707_25662843_25664201_25664331_25666127_25666272_25667879_25667992_25669646_25669843_25670737_25670834_25671600_25671722_25673086_25673255_25674295_25674413_25674504_25674630_25676134
transcript_143598.known	chr4	-	4543	24	FSM	ENSG00000091490.11	ENST00000399878.8	4543	24	0	0	0	0	multi-exon	TRUE	canonical	3	308	junction_16	28.2249939513523	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGAAAGTGGTTTTTT	1	True	NA	-7	True	AATAAA	-20	NA	25862988	25747432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25748565_25757533_25757607_25757687_25757791_25758940_25759069_25765325_25765436_25767524_25767610_25767739_25767831_25776276_25776361_25779075_25779204_25782241_25782419_25784227_25784291_25788223_25788365_25790454_25790575_25802282_25802463_25804540_25804753_25818137_25818279_25819807_25819941_25821995_25822129_25830097_25830157_25832994_25833111_25833447_25833570_25835196_25835324_25847293_25847865_25862674
transcript_14360.known	chr1	+	1052	4	FSM	ENSG00000243364.8	ENST00000427683.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	40.1331118487798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	15	True	NA	20	True	AATAAA	-14	NA	155063760	155069538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155069018
transcript_143603.known	chr4	+	935	3	FSM	ENSG00000250317.9	ENST00000506197.3	919	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	510	junction_2	4	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTGGTGTCTTTTT	-32	True	NA	14	True	ATTAAA	-15	NA	25914203	25929812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25914423_25928312_25928370_25929153
transcript_14361.known	chr1	+	776	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	52.6898683071254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCCCATTGCTCTCCTC	6613	False	NA	NA	False	NA	NA	NA	155085521	155086923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
transcript_143610.known	chr4	+	1766	13	FSM	ENSG00000168214.22	ENST00000681679.1	1766	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	485.862949354605	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGGTTTCTTGGGA	-2	True	NA	NA	False	AAAAAG	-29	NA	26321010	26431083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26422131_26422157_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_143613.known	chr4	+	1637	12	FSM	ENSG00000168214.22	ENST00000681025.1	1637	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	478.940324790828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTCATACCAGGTGAT	-2	True	NA	NA	False	AAAAAG	-38	NA	26321010	26431104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26412929_26412988_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_143615.known	chr4	+	1998	12	FSM	ENSG00000168214.22	ENST00000348160.9	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	323.438729236695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTGTCTCCCTGCAAG	-21	True	NA	NA	False	NA	NA	NA	26320806	26431136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_143617.known	chr4	+	2136	12	FSM	ENSG00000168214.22	ENST00000505958.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	385.928161002207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTTTTTGCTAGGACT	143	False	NA	NA	False	NA	NA	NA	26321364	26431009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321872_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_143621.known	chr4	+	5395	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	227.113385778998	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	1	True	NA	23	True	AATAAA	-29	NA	26321013	26434923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_143625.known	chr4	+	1678	11	FSM	ENSG00000168214.22	ENST00000509158.6	1678	11	0	0	0	0	multi-exon	TRUE	canonical	2	31	junction_9	449.206422483027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCCCTGCAAGTGCT	102	False	NA	NA	False	NA	NA	NA	26320974	26431140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26430418_26430523_26430691
transcript_143627.known	chr4	+	1992	12	FSM	ENSG00000168214.22	ENST00000342295.6	1992	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	438.433594206609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	367	False	NA	NA	False	NA	NA	NA	26319635	26431186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26319889_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_143629.known	chr4	+	340	4	FSM	ENSG00000168214.22	ENST00000514807.5	340	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	446.327483158076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAAGATTATTTT	25	False	NA	NA	False	NA	NA	NA	26320786	26406263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26320816_26362445_26362629_26386352_26386392_26406174
transcript_14363.known	chr1	+	1552	5	FSM	ENSG00000169242.12	ENST00000368407.8	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.58457697592217	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGCTAAGTGCGAGGC	1	True	NA	74	True	ATTAAA	-16	NA	155127875	155134899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155128070_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_143633.known	chr4	+	2169	11	FSM	ENSG00000168214.22	ENST00000681484.1	2169	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	359.70493463393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAAATGCAGAAGCC	77	False	NA	NA	False	NA	NA	NA	26321298	26431159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321872_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_143635.known	chr4	+	2967	21	FSM	ENSG00000109680.11	ENST00000264866.9	2967	21	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	6.07947366142827	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTATAATCCTATGCT	-12	True	NA	NA	False	AATAAA	-27	NA	26584083	26756223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26584293_26613168_26613242_26614407_26614454_26620612_26620689_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_143636.known	chr4	+	3613	13	FSM	ENSG00000109689.19	ENST00000465503.6	3613	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	42.3952139594397	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTGCTGATTTTTG	5	True	NA	18	True	AATAAA	-18	NA	26860840	27023966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27007982_27008007_27008427_27008529_27008763_27009003_27017710_27017985_27022518
transcript_14364.known	chr1	+	1083	5	FSM	ENSG00000169242.12	ENST00000474413.5	1083	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.039531242695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCTTTCCCACCATT	200	False	NA	NA	False	NA	NA	NA	155129561	155134307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155129879_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_143643.nic	chr4	+	1658	8	ISM	ENSG00000109689.19	ENST00000465503.6	3613	13	-165	16300	-118	5272	5prime_fragment	FALSE	canonical	3	106	junction_5	26.6075023945027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGAAATGCAGCTAGCTA	2934	False	NA	-33	True	ATTAAA	-9	NA	26860675	27007666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532
transcript_143646.known	chr4	+	6403	2	FSM	ENSG00000169851.15	ENST00000361762.3	6403	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGCCATTGGTTTATTG	35	False	NA	4	True	ATTAAA	-18	NA	30720414	30732973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_30724597_30730752
transcript_14365.nnic	chr1	+	1873	5	NNC	ENSG00000169242.12	novel	719	4	NA	NA	-706	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.039531242695	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	1136	False	NA	32	True	AATAAA	-19	NA	155130497	155134857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_155131055_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_143651.known	chr4	+	3643	4	FSM	ENSG00000154274.15	ENST00000381980.9	3643	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCTCTATTAAGGACC	-18	True	NA	NA	False	AATAAA	-16	NA	37453924	37593510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37454041_37558026_37558077_37588845_37588900_37590087
transcript_143652.known	chr4	-	3617	7	FSM	ENSG00000181826.10	ENST00000454158.7	3617	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.91070819942883	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTGTCTTGTGGGTGA	0	True	NA	-3	True	AATAAA	-14	NA	37686376	37610633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_37613343_37631384_37631524_37634886_37635124_37638446_37638505_37647367_37647440_37649275_37649501_37686199
transcript_143653.known	chr4	+	3211	14	FSM	ENSG00000169299.14	ENST00000381967.9	3211	14	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	19.9520134381642	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTGCATTTTTTTT	-18	True	NA	10	True	AAGAAA	-13	NA	37826685	37862937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201_37847296_37848521_37848652_37850183_37850374_37855607_37855742_37861509
transcript_143659.known	chr4	+	5703	20	FSM	ENSG00000065882.17	ENST00000261439.9	5703	20	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	103.043357466678	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGTGGTTTTTTTT	-15	True	NA	19	True	AATAAA	-24	NA	37891083	38139173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37891349_37902002_37902513_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_143663.nic	chr4	+	3696	20	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_11	88.7769778746383	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTTCCTTTTTGAG	-22	True	NA	10	True	AATAAA	-16	NA	37977369	38137619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_143668.nic	chr4	+	3534	19	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	3	255	junction_10	42.1247779054115	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTTCCTTTTTGAG	-22	True	NA	10	True	AATAAA	-16	NA	37977369	38137619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_14367.known	chr1	+	1444	4	FSM	ENSG00000169242.12	ENST00000368406.2	1444	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	14.1656862405839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	1	True	NA	32	True	AATAAA	-19	NA	155127875	155134857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155128070_155131338_155131635_155133729_155133781_155133954
transcript_143676.known	chr4	+	1567	3	FSM	ENSG00000065882.17	ENST00000402522.1	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCCATCTCTTGAA	0	True	NA	0	True	AATAAA	-21	NA	37891098	37952812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37891349_37902002_37902513_37952005
transcript_143678.known	chr4	+	1987	12	FSM	ENSG00000065882.17	ENST00000446803.6	1987	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_10	36.1495973480999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAACAGATACTGCTGCT	20	False	NA	NA	False	AAGAAA	-43	NA	37977309	38090065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931
transcript_143680.known	chr4	+	5594	6	FSM	ENSG00000109787.13	ENST00000261438.10	5594	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	15.0598804776134	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTCAAGCCTTTAGT	1	True	NA	NA	False	ATTAAA	-25	NA	38664198	38701517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38664462_38680586_38680683_38688584_38689072_38689728_38689880_38694745_38694907_38697081
transcript_143683.known	chr4	+	1871	4	FSM	ENSG00000109787.13	ENST00000514033.1	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	16.4181471413663	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCCTTTATTTTCTCT	-1	True	NA	13	True	AATAAA	-13	NA	38664196	38690751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38664462_38680586_38680683_38688584_38689072_38689728
transcript_143684.known	chr4	-	2001	4	FSM	ENSG00000231160.11	ENST00000436901.3	2001	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	1373	False	NA	NA	False	NA	NA	NA	38664914	38626407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_38628103_38630499_38630582_38635955_38636059_38664793
transcript_143686.known	chr4	+	4060	15	FSM	ENSG00000197712.12	ENST00000358869.5	4060	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	20.2016618835467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTGCCAGAAATGTTT	4	True	NA	11	True	ATTAAA	-15	NA	38867805	38945739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38867835_38868397_38868547_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_143693.nic	chr4	+	3152	14	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	10	-804	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	10.915490323118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGAAGAACAAGGTAAAT	5	True	NA	NA	False	AATAAA	-18	NA	38867760	38944935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_143694.nic	chr4	+	3956	14	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	10.915490323118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTGCCAGAAATGTTT	5	True	NA	11	True	ATTAAA	-15	NA	38867760	38945739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_143698.nic	chr4	+	1329	10	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	10	2253	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	11.3670522363192	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAAAGGAAGAGA	5	True	NA	-41	True	AAGAAA	-5	NA	38867760	38931536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450
transcript_143700.known	chr4	+	1431	13	FSM	ENSG00000197712.12	ENST00000515037.5	1431	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.0043854588005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGACTCCATCTAGTTA	-5	True	NA	NA	False	NA	NA	NA	38867750	38943560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38867835_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_143701.nic	chr4	+	1117	8	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	10	-6424	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	9.72058619211657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAGAGAATGAAGAAAA	5	True	NA	NA	False	ATTAAA	-19	NA	38867760	38922859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769
transcript_143705.known	chr4	+	3425	12	FSM	ENSG00000109790.18	ENST00000261425.7	3425	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	64.9213128294871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATGTCTAAGATGCTT	38	False	NA	11	True	GATAAA	-20	NA	39045038	39122209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39045097_39062558_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
transcript_14371.known	chr1	+	1298	6	FSM	ENSG00000169241.19	ENST00000368404.9	1298	6	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	90.4070793688193	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	5	True	NA	14	True	AATAAA	-19	NA	155135851	155138853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_143710.known	chr4	+	2926	11	FSM	ENSG00000109790.18	ENST00000508137.6	2926	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	24.871871662583	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGATGTCTAAGATGCT	59	False	NA	10	True	GATAAA	-19	NA	39045059	39122208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39045097_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
transcript_143717.nic	chr4	+	2072	10	ISM	ENSG00000109790.18	ENST00000508137.6	2926	11	-280	6813	-259	-937	5prime_fragment	TRUE	canonical	3	145	junction_1	23.7336038270062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCCCCTCAATCTTGTC	-39	True	NA	6	True	ATTAAA	-19	NA	39044779	39115395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_39045097_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158
transcript_14372.known	chr1	+	890	6	FSM	ENSG00000169241.19	ENST00000488609.5	890	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	151.314242555022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTGGGGCCTAGGA	20	True	NA	NA	False	GATAAA	-28	NA	155135866	155138440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136397_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_143724.known	chr4	+	4395	37	FSM	ENSG00000157796.18	ENST00000399820.8	4395	37	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_12	13.0373099455863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	9	True	NA	13	True	AATAAA	-14	NA	39182528	39285810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_143730.known	chr4	+	2513	14	FSM	ENSG00000157796.18	ENST00000506503.1	2513	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.1237019515407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAGTATAGTA	28	False	NA	NA	False	AATAAA	-19	NA	39182547	39219133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217986
transcript_143733.known	chr4	-	4886	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	51.7984207180961	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-11	True	NA	-7	True	AATAAA	-19	NA	39366375	39287455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_14374.known	chr1	+	1137	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	138.400686414483	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGATGGTTCATTCTCTA	3	True	NA	13	True	AATAAA	-18	NA	155135849	155138852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
transcript_14375.known	chr1	+	1166	5	FSM	ENSG00000169241.19	ENST00000650403.1	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	105.057127316522	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	11	True	NA	12	True	AATAAA	-17	NA	155135857	155138851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138179
transcript_143752.known	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_7	1325.20159421355	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	5	True	NA	-6	True	AATAAA	-31	NA	39458922	39454123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_143753.known	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	2730.76545297901	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	4	True	NA	-72	True	NA	NA	NA	39458923	39452586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
transcript_143755.known	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	5878	junction_3	980.516360563827	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-5	True	NA	-19	True	AATAAA	-18	NA	39458888	39454136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
transcript_143756.known	chr4	-	772	7	FSM	ENSG00000163682.17	ENST00000503277.6	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_6	1396.90555832844	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAACCGGTTATCCTT	33	False	NA	-14	True	AATAAA	-23	NA	39458894	39454131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458441_39458890
transcript_143759.known	chr4	-	951	3	FSM	ENSG00000163682.17	ENST00000514842.6	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	7785	junction_2	498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAAGGCTGGGGTCTCG	26	True	NA	NA	False	NA	NA	NA	39458901	39457354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39457682_39458193_39458310_39458393
transcript_143760.known	chr4	+	3572	11	FSM	ENSG00000121897.15	ENST00000640888.2	3572	11	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_7	18.8374626741501	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	39459055	39479506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_143762.known	chr4	+	1578	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	29.9481032602883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	10	True	NA	10	True	ATTAAA	-25	NA	39459062	39477648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_143767.known	chr4	+	1011	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	6.23609564462324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAAGTTTTTAA	5	True	NA	NA	False	NA	NA	NA	39459057	39464163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
transcript_143769.known	chr4	+	1005	3	FSM	ENSG00000121897.15	ENST00000509519.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	46	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGAGGATCACTTGAGC	-8	True	NA	NA	False	NA	NA	NA	39459044	39464238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39459163_39460789_39460963_39463524
transcript_143774.known	chr4	-	3037	12	FSM	ENSG00000109814.12	ENST00000316423.11	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_1	89.1158592150486	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	-1	True	NA	0	True	AATAAA	-21	NA	39527439	39498754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39521350_39521520_39527282
transcript_14378.known	chr1	+	1003	4	FSM	ENSG00000169241.19	ENST00000368405.7	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	146.13540144522	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	12	True	NA	12	True	AATAAA	-17	NA	155135858	155138851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155137978_155138099_155138179
transcript_143790.known	chr4	-	1712	11	FSM	ENSG00000109814.12	ENST00000507089.5	1712	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	332.492420966253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGGCACCCGCCACAGT	-1	True	NA	NA	False	NA	NA	NA	39527439	39499910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39527282
transcript_143791.known	chr4	-	2826	11	FSM	ENSG00000109814.12	ENST00000501493.6	2826	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	344.615495879103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTATATGGGTGTAAT	1	True	NA	-8	True	AATAAA	-13	NA	39527437	39498762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39514082_39514185_39521350_39521520_39527282
transcript_143800.known	chr4	-	6252	5	FSM	ENSG00000163683.12	ENST00000295958.10	6252	5	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	60.6315718087532	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATACTTGTTTCTTAA	-1	True	NA	NA	False	AATAAA	-13	NA	39638865	39546335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
transcript_143802.known	chr4	-	680	4	FSM	ENSG00000163683.12	ENST00000507613.5	680	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	227.779620588751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTGTGATTATAATTT	241	False	NA	NA	False	GGGGCT	-44	NA	39638845	39551838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39552159_39556427_39556571_39605070_39605181_39638738
transcript_143803.known	chr4	-	830	4	FSM	ENSG00000163683.12	ENST00000511809.5	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	255.241497845124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTATTTGTGGATGG	193	False	NA	NA	False	AAGAAA	-32	NA	39638893	39551642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39552159_39572414_39572464_39605070_39605181_39638738
transcript_143809.known	chr4	+	5153	7	FSM	ENSG00000078140.14	ENST00000261427.10	5153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	355.845823356127	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATATCTTATTTCTG	3	True	NA	24	True	AATAAA	-25	NA	39698135	39782792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_143813.known	chr4	+	2262	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	446.105244184474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGTAATGTTAAAG	6	True	NA	8	True	AATAAA	-14	NA	39698138	39779992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_143816.known	chr4	+	2175	6	FSM	ENSG00000078140.14	ENST00000445950.2	2175	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	448.597547920182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	9	True	NA	-1	True	AATAAA	-5	NA	39698175	39779983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39778359
transcript_14382.nic	chr1	+	1303	3	NIC	ENSG00000169241.19	novel	1298	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	79	junction_1	175	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	21	True	NA	14	True	AATAAA	-19	NA	155135867	155138853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155136377_155137978_155138099_155138179
transcript_143822.known	chr4	+	871	6	FSM	ENSG00000078140.14	ENST00000513231.5	871	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	285.56428348097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTCTGTGTAAATT	6	True	NA	6	True	AATAAA	-5	NA	39698138	39778607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_143825.known	chr4	+	589	5	FSM	ENSG00000078140.14	ENST00000510934.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	479.15915936148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCATGGGATGTAGAG	NA	False	NA	NA	False	NA	NA	NA	39698108	39778384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39777681_39777811_39778359
transcript_143826.known	chr4	+	891	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	405.015431804765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGTGTTTAGCAGTGT	-4	True	NA	109	True	AAGAAA	-7	NA	39698162	39778710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_143828.known	chr4	+	566	4	FSM	ENSG00000078140.14	ENST00000510719.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	460.029226124698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTAATTTTT	161	False	NA	32	True	AATAAA	-31	NA	39698327	39778633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39774833_39774934_39777681_39777811_39778359
transcript_143829.known	chr4	-	7131	33	FSM	ENSG00000121892.15	ENST00000303538.13	7131	33	0	0	0	0	multi-exon	TRUE	canonical	1	147	junction_3	64.1808966905262	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGTGTGGAGCCCTG	-28	True	NA	NA	False	AATAAA	-20	NA	39977911	39822862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39825489_39837855_39838209_39841947_39842057_39844655_39844802_39845817_39845881_39848850_39848971_39849519_39849653_39862218_39862334_39862868_39863074_39863335_39863460_39866860_39866998_39869393_39869463_39872985_39873145_39874288_39874413_39876992_39877154_39879727_39879834_39890248_39890365_39898388_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_14383.known	chr1	-	396	2	FSM	ENSG00000179085.8	ENST00000368400.5	396	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	6	True	NA	-4	True	ATTAAA	-20	NA	155140531	155139890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155140246_155140490
transcript_143835.known	chr4	-	2685	16	FSM	ENSG00000121892.15	ENST00000503396.5	2685	16	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_12	44.988887516808	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGGTTTCATTTACA	7	False	NA	-1	True	AATAAA	-22	NA	39977956	39898013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_143838.known	chr4	+	9720	18	FSM	ENSG00000078177.14	ENST00000261435.11	9720	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	26.8941279398879	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTGTGAGGAAATCCT	-15	True	NA	14	True	AATAAA	-15	NA	40056849	40158252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
transcript_14384.known	chr1	-	486	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	NA	False	NA	-4	True	ATTAAA	-20	NA	155140595	155139890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155140272_155140490
transcript_143841.nnic	chr4	+	2613	11	NNC	ENSG00000078177.14	novel	9747	19	NA	NA	-28	17498	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	45.5509604728594	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	-43	True	NA	NA	False	AAGAAA	-6	NA	40056821	40120104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_40057031_40073454_40073552_40080370_40080480_40097226_40097570_40100035_40100127_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_143849.nic	chr4	+	2552	10	ISM	ENSG00000078177.14	ENST00000511480.5	9747	19	-139	38147	-76	17498	5prime_fragment	FALSE	canonical	3	21	junction_3	40.177384462185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	607	False	NA	NA	False	AAGAAA	-6	NA	40056773	40120104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40057031_40073454_40073552_40097226_40097570_40100035_40100127_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_143854.nic	chr4	+	2526	9	ISM	ENSG00000078177.14	ENST00000261435.11	9720	18	-141	38148	-141	17498	5prime_fragment	FALSE	canonical	3	42	junction_2	27.9329554469268	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	542	False	NA	NA	False	AAGAAA	-6	NA	40056708	40120104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_143855.nic	chr4	+	2864	9	ISM	ENSG00000078177.14	ENST00000261435.11	9720	18	-44	37713	-44	17933	5prime_fragment	FALSE	canonical	3	42	junction_2	27.9329554469268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATCCGTACAAAGCGAC	-59	True	NA	NA	False	AAAAAG	-21	NA	40056805	40120539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_143861.nic	chr4	+	2323	8	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	-281	17498	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	31.3856850250205	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	402	False	NA	NA	False	AAGAAA	-6	NA	40056568	40120104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_40057031_40073454_40073552_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_143863.nnic	chr4	+	2525	8	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	-237	17498	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	36.5658477884733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	446	False	NA	NA	False	AAGAAA	-6	NA	40056612	40120104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_40057031_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_143868.known	chr4	+	2268	4	FSM	ENSG00000168421.13	ENST00000610353.4	2268	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.6707311029399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGGCAACAGAACTT	194	False	NA	NA	False	NA	NA	NA	40196906	40244764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40197301_40235192_40235359_40242713_40242835_40243177
transcript_143869.known	chr4	+	4181	3	FSM	ENSG00000168421.13	ENST00000381799.10	4181	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGGTAGTTCATTCTT	-15	True	NA	NA	False	ATTAAA	-35	NA	40197030	40246967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40197301_40242713_40242835_40243177
transcript_143877.known	chr4	-	5114	7	FSM	ENSG00000163694.15	ENST00000295971.12	5114	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_6	72.2213034129589	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-7	True	NA	-17	True	AATAAA	-17	NA	40629864	40423279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40629395
transcript_143879.nic	chr4	-	4568	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	164	junction_6	73.403943278879	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	94	False	NA	NA	False	AAGAAA	-43	NA	40630786	40423680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462
transcript_143882.nic	chr4	-	4503	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	0	-65	intron_retention	FALSE	canonical	3	164	junction_6	73.403943278879	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAGGAAGAAAG	94	False	NA	NA	False	NA	NA	NA	40630786	40423745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462
transcript_143884.nic	chr4	-	3808	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	0	-760	intron_retention	FALSE	canonical	3	164	junction_6	73.403943278879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGTTGCAGTGTTTTGT	94	False	NA	3	True	ATTAAA	-27	NA	40630786	40424440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462
transcript_143895.known	chr4	-	8972	18	FSM	ENSG00000163697.17	ENST00000295974.12	8972	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	99.9181672090131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTCTATGAATGTT	-7	True	NA	-2	True	AATAAA	-20	NA	41214618	40810026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945071_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
transcript_143897.known	chr4	-	8899	18	FSM	ENSG00000163697.17	ENST00000508593.6	8899	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	99.7556530298844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTCTATGAATGTT	0	True	NA	-2	True	AATAAA	-20	NA	41214542	40810026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945074_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
transcript_143899.known	chr4	-	3316	17	FSM	ENSG00000163697.17	ENST00000506352.5	3316	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	97.9826993657554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGCGAGTTTGTGT	-4	True	NA	-59	True	NA	NA	NA	41214615	40815616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40944864_40945071_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
transcript_143913.known	chr4	-	1681	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_6	49.9357921067978	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCATTTTGGGTGGGA	-14	True	NA	-28	True	AATAAA	-4	NA	40857155	40815332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
transcript_143927.known	chr4	-	604	5	FSM	ENSG00000163697.17	ENST00000508676.5	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	22.5222112591104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGAACAGCCCAGCCACA	3	True	NA	-110	True	NA	NA	NA	41214608	41014335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_41014399_41033235_41033305_41100638_41100751_41142986_41143143_41214404
transcript_143931.known	chr4	+	4839	12	FSM	ENSG00000179299.17	ENST00000381782.7	4839	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_10	78.1193196282044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTTTTCTTCTTTGAG	10	True	NA	NA	False	ATTAAA	-17	NA	40749954	40811184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40807060_40807185_40808306
transcript_143936.known	chr4	+	3546	11	FSM	ENSG00000179299.17	ENST00000316607.5	3546	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	82.7091288794653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATATCTTATTATTTAA	-20	True	NA	5	True	ATTAAA	-17	NA	40749924	40809985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40808306
transcript_143951.nnic	chr4	+	2033	8	NNC	ENSG00000179299.17	novel	3546	11	NA	NA	-22	10372	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_7	76.1571951121293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCCCAACTCTGTTG	NA	False	NA	10	True	ATTAAA	-20	NA	40749902	40786848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40786340
transcript_143952.nnic	chr4	+	1826	8	NNC	ENSG00000179299.17	novel	3546	11	NA	NA	-22	10372	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	76.740750955036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCCCAACTCTGTTG	NA	False	NA	10	True	ATTAAA	-20	NA	40749902	40786848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40786547
transcript_143956.known	chr4	+	1759	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	29.5472502950782	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	19	True	NA	NA	False	AATAAA	-7	NA	40749963	40775456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
transcript_143960.nic	chr4	+	1397	4	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-61	13735	-22	-13735	5prime_fragment	FALSE	canonical	3	207	junction_2	22.3954360429878	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTACTTAAGAACAAACTA	NA	False	NA	NA	False	AGTAAA	-11	NA	40749902	40761721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170
transcript_143962.nic	chr4	+	1235	3	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-61	14575	-22	-14575	5prime_fragment	FALSE	canonical	3	207	junction_2	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAATAGTTTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	40749902	40760881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602_40750992_40760433
transcript_143965.nic	chr4	+	1361	2	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-61	23891	-22	-23891	5prime_fragment	FALSE	canonical	3	255	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATATCAAAATTACACCA	NA	False	NA	NA	False	AATAAA	-26	NA	40749902	40751565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602
transcript_143966.known	chr4	+	748	9	FSM	ENSG00000154277.13	ENST00000505232.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	978.7329819721	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTCAACATGAAAATAT	2	True	NA	-29	True	NA	NA	NA	41256931	41268108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263228_41263292_41264102_41264162_41267986
transcript_143970.known	chr4	+	827	8	FSM	ENSG00000154277.13	ENST00000508768.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	1020.47129967941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCACAGCTGTCCACTGG	10	False	NA	102	True	NA	NA	NA	41256939	41268239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41263224_41263292_41264102_41264162_41267986
transcript_143971.known	chr4	+	1550	8	FSM	ENSG00000154277.13	ENST00000472501.5	1550	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1048.84085678293	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCACAGCTGATTCTCAT	16	False	NA	27	True	AATAAA	-19	NA	41256945	41268427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257021_41257114_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_143973.known	chr4	+	1119	8	FSM	ENSG00000154277.13	ENST00000512419.5	1119	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1049.18926912592	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTCCTCAATATGTCA	NA	False	NA	55	True	NA	NA	NA	41256910	41268455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257021_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_143978.known	chr4	+	5705	20	FSM	ENSG00000064042.18	ENST00000381753.8	5705	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	6.12338508305221	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATTCCATTAATTAT	1	True	NA	3	True	AATAAA	-14	NA	41612901	41700044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41613099_41613465_41613662_41619187_41619441_41644499_41644627_41646122_41646281_41646484_41646894_41650392_41650609_41661419_41661511_41662820_41662985_41666560_41666667_41671553_41671595_41676381_41676463_41680005_41680099_41680954_41681060_41682332_41682461_41684396_41684519_41685709_41685831_41689526_41689636_41692281_41692385_41697159
transcript_143982.known	chr4	+	1092	8	FSM	ENSG00000109133.13	ENST00000513702.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	82.1775082193593	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTTGCTAATGGTTA	-26	True	NA	-37	True	AAAAAG	-20	NA	41935128	41954395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41935263_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_143984.known	chr4	+	867	8	FSM	ENSG00000109133.13	ENST00000508448.5	867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.119448461425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCACTGTTTGTGAGA	-26	True	NA	106	True	AATGAA	-38	NA	41935128	41954122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41935311_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_143987.known	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	25.2151850192608	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	0	True	NA	19	True	AAAAAG	-29	NA	41935428	41960803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_143992.known	chr4	+	6164	18	FSM	ENSG00000014824.14	ENST00000264451.12	6164	18	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_17	66.8171600112749	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTTTGGGATTTTT	9	True	NA	17	True	AATAAA	-27	NA	41990529	42090461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
transcript_143993.nic	chr4	+	2383	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-18	11555	10	55	5prime_fragment	FALSE	canonical	3	548	junction_16	52.3305300470003	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAATTTGTTGAAGGC	-9	True	NA	20	True	AATAAA	-22	NA	41990511	42078906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_143995.nic	chr4	+	750	6	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-18	67077	10	2609	5prime_fragment	FALSE	canonical	3	589	junction_5	49.9759942372335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATATTCAATTTAAA	-9	True	NA	NA	False	AATACA	-7	NA	41990511	42023384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301
transcript_143996.known	chr4	-	8692	6	FSM	ENSG00000188848.17	ENST00000504360.5	8692	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	34.4766587708264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTAACTTGGTTTT	NA	False	NA	-21	True	AATAAA	-16	NA	42152878	42110939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_42117736_42120124_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
transcript_143999.known	chr4	-	8627	6	FSM	ENSG00000188848.17	ENST00000502486.6	8627	6	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	39.7713464695376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTTTTGCTTGTCT	-1	True	NA	1	True	AATACA	-20	NA	42152655	42110852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_42117736_42120053_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
transcript_144004.nnic	chr4	-	1146	2	FSM	ENSG00000289643.1	ENST00000685812.1	1117	2	-30	1	-30	-1	multi-exon	FALSE	canonical	3	100	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTCTGGTCTATGTT	NA	False	NA	-6	True	ATTAAA	-13	NA	42292674	42285823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_42286402_42292106
transcript_144005.known	chr4	+	2322	2	FSM	ENSG00000178343.5	ENST00000319234.5	2322	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTAATGTGATTC	7	True	NA	19	True	AATAAA	-30	NA	42397487	42402487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_42398334_42401011
transcript_144007.known	chr4	+	4460	17	FSM	ENSG00000151806.14	ENST00000281543.6	4460	17	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_9	29.0688837074973	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTATCACTGCCAA	-27	True	NA	3	True	ATTAAA	-15	NA	44678419	44700928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
transcript_14402.known	chr1	+	3127	10	FSM	ENSG00000163462.19	ENST00000368382.5	3127	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.84070658910423	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCAATCATTCCTGTGAG	33	False	NA	33	True	AATAAA	-33	NA	155173908	155184969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155174040_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_144020.known	chr4	-	2235	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	15.0296004234607	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTATAAATGTTTTT	12	True	NA	NA	False	NA	NA	NA	44726556	44701794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_144021.known	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	10.8185026690388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	23	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_144025.known	chr4	-	1461	5	FSM	ENSG00000169019.11	ENST00000381571.6	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	21.1113121335458	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTTTTATTTTTAT	-23	True	NA	66	True	AATGAA	-3	NA	47463702	47450786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47451666_47453058_47453215_47456576_47456730_47460143_47460300_47463585
transcript_144028.known	chr4	+	6668	23	FSM	ENSG00000145246.14	ENST00000273859.8	6668	23	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	4.16027057289179	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAGAGGTTGGGATCTG	-34	True	NA	NA	False	TTTAAA	-43	NA	47485274	47593486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_47485520_47512503_47512831_47515475_47515671_47523011_47523217_47525556_47525643_47535508_47535616_47535901_47536034_47536436_47536565_47536685_47536939_47546623_47546863_47554725_47554915_47557663_47558274_47558922_47559030_47560948_47561076_47563580_47563766_47568836_47569147_47572153_47572231_47572871_47572998_47576772_47576974_47580397_47580479_47581959_47582065_47587018_47587207_47591041
transcript_144029.known	chr4	-	3880	23	FSM	ENSG00000170448.12	ENST00000507489.2	3880	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	24.8107298169479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCTAGAATATTTA	-3	True	NA	3	True	ATTAAA	-16	NA	47914583	47847239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914364
transcript_144030.known	chr4	-	2664	23	FSM	ENSG00000170448.12	ENST00000507131.5	2664	23	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_22	17.0230762192661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCGTCGGAAGAAGAACAG	-7	True	NA	NA	False	AAAACA	-9	NA	47914616	47848303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_144031.known	chr4	-	3723	23	FSM	ENSG00000170448.12	ENST00000329043.7	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	23.110764548507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAATATTTATTATTAG	NA	False	NA	10	True	ATTAAA	-23	NA	47914667	47847232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
transcript_144042.known	chr4	+	6081	8	FSM	ENSG00000109171.15	ENST00000264313.11	6081	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	13.399664936414	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACATGAGTTTGCTTT	-15	True	NA	17	True	AATAAA	-18	NA	48341528	48426201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48342129_48369848_48369998_48377895_48378061_48379689_48379849_48382567_48382928_48383646_48383785_48420124_48420444_48422010
transcript_144045.nic	chr4	+	1479	5	ISM	ENSG00000109171.15	ENST00000264313.11	6081	8	-60	43288	-60	3189	5prime_fragment	FALSE	canonical	3	190	junction_4	14.7880864211703	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTAAAAATGAAGGTAAAA	-11	True	NA	7	True	NA	NA	NA	48341468	48382913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_48342129_48369848_48369998_48377895_48378061_48379689_48379849_48382567
transcript_144046.nic	chr4	+	745	2	ISM	ENSG00000109171.15	ENST00000264313.11	6081	8	-120	56328	-120	-9851	5prime_fragment	FALSE	canonical	3	192	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACACCAATGCAGAAATC	23	False	NA	NA	False	AAGAAA	-4	NA	48341408	48369873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_48342129_48369848
transcript_144047.known	chr4	+	2120	3	FSM	ENSG00000145248.7	ENST00000273861.5	2120	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	4.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCATGTTCTTTTCGAC	-8	True	NA	8	True	AATGAA	-23	NA	48483342	48489526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48484152_48484931_48485143_48488426
transcript_144052.known	chr4	+	1460	4	FSM	ENSG00000182223.7	ENST00000327939.4	1460	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATACATTGCATAAAATC	6762	False	NA	NA	False	AATAAA	-16	NA	48490251	48494389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48491255_48492765_48492859_48492937_48493013_48494100
transcript_144055.known	chr4	-	441	3	FSM	ENSG00000075539.15	ENST00000502520.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATCATGTCAAACATTA	NA	False	NA	NA	False	AATAAA	-45	NA	48780322	48634417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48634491_48684672_48684796_48780077
transcript_144061.known	chr4	+	1958	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	86.499187134909	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	10	True	NA	2	True	AATAAA	-17	NA	48831087	48861815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_144066.known	chr4	+	1756	8	FSM	ENSG00000109180.15	ENST00000444354.6	1756	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	258.261218813157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAACAATAAAAATTTGG	-14	True	NA	-27	True	AGTAAA	-44	NA	48831107	48861786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
transcript_144068.known	chr4	+	1306	8	FSM	ENSG00000109180.15	ENST00000396448.6	1306	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	270.765505897028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTCATCTTCCTTGAT	-13	True	NA	29	True	AATAAA	-19	NA	48831064	48861248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48852021_48860724
transcript_144072.known	chr4	+	496	5	FSM	ENSG00000109180.15	ENST00000507546.5	496	5	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	112.828409542987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAACAATTAATTTAAAAT	0	True	NA	NA	False	NA	NA	NA	48831222	48848669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398
transcript_144073.known	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	255.255141965838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	17	True	NA	31	True	AATAAA	-21	NA	48831341	48861250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_144074.known	chr4	+	1594	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	214.2782945144	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	6	True	NA	-19	True	ATTAAA	-25	NA	48831083	48861200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_144077.known	chr4	-	1109	7	FSM	ENSG00000145247.12	ENST00000508632.6	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	1999	junction_2	191.250925923685	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGACTCCATCACACACA	38	False	48906796	NA	False	NA	NA	NA	48906774	48885018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_144078.known	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	812.464497685899	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	NA	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
transcript_144080.known	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.695312682792	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	24	False	NA	NA	False	AATAAA	-16	NA	48906788	48885387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_144084.known	chr4	-	459	4	FSM	ENSG00000145247.12	ENST00000506226.6	459	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	1090.4990702528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCTAATGGAACAAAAACA	38	False	48906796	NA	False	AATAAA	-4	NA	48906774	48885399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48894005_48894054_48904483_48904612_48906657
transcript_144088.known	chr4	+	4222	11	FSM	ENSG00000109184.15	ENST00000334635.10	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_8	69.7352851861954	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	4	True	NA	18	True	AATAAA	-25	NA	51843152	51916837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_144093.known	chr4	+	4207	10	FSM	ENSG00000109184.15	ENST00000381441.7	4207	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	102.710788979734	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	NA	False	NA	18	True	AATAAA	-25	NA	51843062	51916837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51913289_51913393_51913528
transcript_144104.known	chr4	-	4248	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_4	76.8130197297307	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	-16	True	NA	-26	True	AATAAA	-15	NA	52038299	52020705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
transcript_144116.known	chr4	-	7932	9	FSM	ENSG00000109189.13	ENST00000441222.8	7932	9	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_2	27.3698625316241	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCAGTATATTGTTCT	-26	True	NA	3	True	AATAAA	-27	NA	52659301	52590959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_144117.nic	chr4	-	726	4	ISM	ENSG00000109189.13	ENST00000441222.8	7932	9	-124	35168	-124	0	5prime_fragment	FALSE	canonical	3	164	junction_2	9.20144916122817	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAACATGAACGAACCT	NA	False	NA	NA	False	ATTAAA	-3	NA	52659425	52626127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_52626248_52627949_52628164_52631063_52631145_52659114
transcript_144118.known	chr4	+	2115	5	FSM	ENSG00000226950.8	ENST00000675590.1	2115	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1127.94547740571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	52712453	52721683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867
transcript_144119.known	chr4	+	1644	5	FSM	ENSG00000226950.8	ENST00000675988.1	1644	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1110.27324902476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGGAAAATGATATAT	-2	True	NA	NA	False	AATAAA	-20	NA	52712503	52721102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713703_52714198_52714239_52719867
transcript_144120.known	chr4	-	2744	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	24.1660919471891	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGCCCCCAAACACT	239	False	NA	-13	True	AATAAA	-24	NA	52751399	52743516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
transcript_144121.known	chr4	+	987	3	FSM	ENSG00000226950.8	ENST00000411630.7	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_1	586	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	NA	False	NA	34	True	AATAAA	-19	NA	52712324	52714141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712528_52712823_52712960_52713493
transcript_144122.known	chr4	-	3614	3	FSM	ENSG00000226887.8	ENST00000443173.6	3614	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGAAAGTGATTCACAT	3	True	NA	-28	True	AATAAA	-18	NA	52751425	52742552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52745944_52750929_52751070_52751342
transcript_144123.known	chr4	+	6065	2	FSM	ENSG00000226950.8	ENST00000441504.2	6065	2	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGACTGGACCATGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	52712404	52718765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712528_52712823
transcript_144125.known	chr4	+	122	1	FSM	ENSG00000212588.1	ENST00000391286.1	122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAGAAAAAGTTTCGTT	743	False	NA	24	True	NA	NA	NA	52713248	52713370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52713200_52713400
transcript_144126.known	chr4	+	1059	2	FSM	ENSG00000226950.8	ENST00000425653.2	1059	2	0	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTCTCTTGTCTTTTC	40	False	NA	31	True	AATAAA	-16	NA	52712545	52714138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712960_52713493
transcript_144127.known	chr4	-	511	3	FSM	ENSG00000226887.8	ENST00000454756.6	511	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAACCAAAACTAACCCA	-4	True	NA	NA	False	NA	NA	NA	52751586	52722617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52722745_52750929_52751070_52751342
transcript_144128.nnic	chr4	+	1854	5	NNC	ENSG00000128045.7	novel	1968	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	119.24842766259	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGATGTCTAACTTCGT	-1	True	NA	23	True	AATAAA	-15	NA	52862316	52866833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334_52865570_52865681
transcript_144129.known	chr4	+	1968	4	FSM	ENSG00000128045.7	ENST00000248706.5	1968	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	7.34846922834953	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTCTAACTTCGTCT	-1	True	NA	25	True	AATAAA	-17	NA	52862316	52866835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334
transcript_14413.known	chr1	+	3082	10	FSM	ENSG00000163462.19	ENST00000611379.1	3082	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.82896467791953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCATTCCTGTGAGTT	168	False	NA	35	True	AATAAA	-35	NA	155174753	155184971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155174838_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_144132.known	chr4	+	661	2	FSM	ENSG00000128045.7	ENST00000515677.1	661	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTCTCCCTTCAAAACA	14	False	NA	NA	False	NA	NA	NA	52862331	52863610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52862650_52863267
transcript_144134.known	chr4	-	3162	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	14.1680759102992	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATTGTGGATTACA	-23	True	NA	NA	False	AATAAA	-17	NA	53366061	52872981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
transcript_144135.known	chr4	-	3978	11	FSM	ENSG00000072201.14	ENST00000263925.8	3978	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	13.5679770046975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	53591486	53459300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564_53478743_53481719_53481855_53496022_53496395_53498640_53498844_53507316_53507470_53507985_53508228_53573622_53574089_53591387
transcript_144137.nic	chr4	-	1142	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81066	1158	31232	-1158	3prime_fragment	FALSE	canonical	3	41	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTTGTCTTTTAGTAT	NA	False	NA	-4	True	AATAAA	-14	NA	53477151	53460458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_144139.known	chr4	+	3396	18	FSM	ENSG00000145216.16	ENST00000337488.11	3396	18	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_1	107.073916195364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	-19	True	NA	24	True	TATAAA	-36	NA	53377640	53460862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_144141.known	chr4	+	2180	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_13	117.65626434573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	-15	True	NA	76	True	AATAAA	-19	NA	53377644	53459668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_14415.known	chr1	+	1703	9	FSM	ENSG00000163462.19	ENST00000543729.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	9.8035389018456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGGCAGGCACAGGTG	15	True	NA	NA	False	AATACA	-38	NA	155173890	155179935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155178808_155178847_155179631
transcript_144153.known	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	101.481072931189	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-6	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_144155.known	chr4	-	1109	6	FSM	ENSG00000109220.11	ENST00000263921.8	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	17.5840837122666	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCAGCCTTTTTTATTT	-3	True	NA	-10	True	CATAAA	-3	NA	54064605	54009788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
transcript_144157.known	chr4	-	528	6	FSM	ENSG00000109220.11	ENST00000510894.1	528	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	68.7592902813867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	1453	False	NA	-8	True	NA	NA	NA	54064298	54009978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54049038_54049111_54049250_54049306_54064181
transcript_144159.known	chr4	+	5147	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	79.6018215871974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	-3	True	NA	15	True	AATAAA	-20	NA	54657956	54740715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
transcript_144163.known	chr4	+	538	2	FSM	ENSG00000157404.17	ENST00000514582.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTCTTCACTGTT	0	True	NA	NA	False	GATAAA	-31	NA	54657938	54695906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_54658082_54695511
transcript_144165.known	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_27	31.9526626684731	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-1	True	NA	-13	True	ATTAAA	-20	NA	55125595	55078480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_144169.nic	chr4	-	1837	11	ISM	ENSG00000128052.10	ENST00000512566.1	2037	13	-318	2111	-16	-2111	5prime_fragment	FALSE	canonical	3	107	junction_8	16.9944108459223	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAGGAAAAAACAAAGTG	NA	False	NA	NA	False	AATAAA	-32	NA	55125611	55106703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_144174.nnic	chr4	+	1391	6	NNC	ENSG00000128039.13	novel	2644	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	138.899388047608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATACTAATGGCAGA	95	False	NA	-6	True	AAGAAA	-25	NA	55346212	55370283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_55346558_55351096_55351215_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_144175.known	chr4	+	4061	5	FSM	ENSG00000128039.13	ENST00000264228.9	4061	5	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_3	15.1389398572027	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGTCGAATTTCTTT	-9	True	NA	NA	False	ATTAAA	-21	NA	55346241	55373100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_144176.known	chr4	+	2766	4	FSM	ENSG00000128039.13	ENST00000679836.1	2766	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	128.224629286091	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGTGCTGGGATTACA	95	False	NA	NA	False	NA	NA	NA	55346212	55371911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55369831
transcript_144178.known	chr4	+	768	3	FSM	ENSG00000128039.13	ENST00000505210.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	106.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTCCACTTTCTGA	56	False	NA	21	True	AATAAA	-21	NA	55346411	55370310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55346558_55359345_55359489_55369831
transcript_144182.known	chr4	-	567	4	FSM	ENSG00000134852.15	ENST00000513033.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	7.78888096369861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGTAGATAGTTTCCAG	297	False	NA	NA	False	NA	NA	NA	55546646	55486393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55486550_55489373_55489466_55509911_55510066_55546481
transcript_144184.known	chr4	-	476	4	FSM	ENSG00000134852.15	ENST00000509151.5	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	7.58653778449403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTGTAGTAAAATGAGC	288	False	NA	NA	False	NA	NA	NA	55546655	55482772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55482829_55489373_55489466_55509911_55510066_55546481
transcript_144186.known	chr4	+	1657	7	FSM	ENSG00000134851.13	ENST00000508404.5	1657	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	310.284099209454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTAAGATGTTTACCT	2	True	NA	NA	False	AATACA	-23	NA	55395962	55425804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55396397_55403235_55403339_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
transcript_144189.known	chr4	+	1931	6	FSM	ENSG00000134851.13	ENST00000381334.10	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	23.2120658279266	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	-4	True	NA	21	True	AATAAA	-17	NA	55395956	55426175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55396397_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
transcript_1442.known	chr1	-	5948	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	20.1645573965808	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTGTTTTCTTCCTT	93	False	NA	-2	True	AATAAA	-13	NA	1692728	1661478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_144201.known	chr4	+	828	3	FSM	ENSG00000134851.13	ENST00000506198.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	324	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTTCTCTCCAACAT	-4	True	NA	23	True	AAGAAA	-19	NA	55395956	55425657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55396397_55424537_55424644_55425375
transcript_144202.nic	chr4	+	1299	2	ISM	ENSG00000134851.13	ENST00000381334.10	1931	6	-55	13758	-55	261	5prime_fragment	FALSE	canonical	3	615	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGACTGTTAGGGTGTTT	270	False	NA	NA	False	NA	NA	NA	55395901	55412417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_55396397_55411613
transcript_144203.known	chr4	-	816	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_9	21.7942114865619	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-2	True	NA	-17	True	ATTAAA	-14	NA	55636298	55595230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_144204.nic	chr4	-	804	10	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_9	46.2769441034686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGCTTAGTGTTTT	41	False	NA	-20	True	ATTAAA	-11	NA	55636752	55595233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
transcript_144206.known	chr4	-	756	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_7	60.5411791675716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAGTGTTTTAATGA	509	False	NA	-15	True	ATTAAA	-16	NA	55636284	55595228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
transcript_144207.known	chr4	-	658	9	FSM	ENSG00000109255.11	ENST00000507338.1	658	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	63.5136550278757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACAATGTTGTAAATGT	-1	True	NA	-70	True	NA	NA	NA	55636268	55595283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_144211.known	chr4	+	3357	19	FSM	ENSG00000090989.18	ENST00000346134.11	3357	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	23.3685580679005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	-44	True	NA	27	True	AATAAA	-44	NA	55853674	55905034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_144212.known	chr4	+	3592	19	FSM	ENSG00000090989.18	ENST00000381295.7	3592	19	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	16.5310220905431	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAAAAATTAATTGCAA	-71	True	NA	79	True	ATTAAA	-21	NA	55853647	55905086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_144214.known	chr4	+	3248	18	FSM	ENSG00000090989.18	ENST00000349598.6	3248	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	31.2871509273182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	20	True	NA	27	True	AATAAA	-44	NA	55853738	55905034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_144220.nic	chr4	+	2532	16	NIC	ENSG00000090989.18	novel	3592	19	NA	NA	13	-4756	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	26.7354113905551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGATCACCTTCAGTC	-58	True	NA	NA	False	AAAAAG	-15	NA	55853660	55899821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684
transcript_144224.known	chr4	+	2092	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	5.27636238330917	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	43	False	NA	NA	False	NA	NA	NA	55948870	55960925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
transcript_144229.known	chr4	-	3480	14	FSM	ENSG00000157426.14	ENST00000602986.5	3480	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	16.0029583063949	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTACACTTGATT	NA	False	NA	NA	False	ATTAAA	-28	NA	56387508	56338286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56384069_56384342_56387361
transcript_144231.nic	chr4	-	677	4	ISM	ENSG00000157426.14	ENST00000502617.1	3004	11	9	29383	0	3448	5prime_fragment	FALSE	canonical	3	48	junction_1	6.97614984548545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTTCTGAGCATGTC	-29	True	NA	NA	False	AATAAA	-3	NA	56387491	56378310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_56378465_56382476_56382598_56384069_56384342_56387361
transcript_144233.known	chr4	-	1222	3	FSM	ENSG00000157426.14	ENST00000510012.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTTGCCCATTTTC	-10	True	NA	NA	False	TATAAA	-16	NA	56387472	56381758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56382598_56384069_56384342_56387361
transcript_144236.known	chr4	-	3682	11	FSM	ENSG00000128059.8	ENST00000264220.6	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_6	34.5179663363878	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-12	True	NA	-11	True	GATAAA	-24	NA	56435615	56393361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_144242.nic	chr4	-	778	5	ISM	ENSG00000128059.8	ENST00000264220.6	3682	11	-2	9701	-2	0	5prime_fragment	FALSE	canonical	3	597	junction_2	17.9774163883468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTCTGATATAAATGACA	-14	True	NA	NA	False	NA	NA	NA	56435617	56403062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_144243.nic	chr4	-	674	2	ISM	ENSG00000128059.8	ENST00000510643.5	808	6	-107	4246	0	-4235	5prime_fragment	FALSE	canonical	3	598	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGATGACAAAGATAACAA	-12	True	NA	NA	False	AAAAAG	-15	NA	56435615	56407308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_56407717_56435349
transcript_144245.known	chr4	+	3339	10	FSM	ENSG00000128050.9	ENST00000264221.6	3339	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	899.013011619814	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGTCTCTGAAGTCAC	-6	True	NA	32	True	ATTAAA	-25	NA	56435748	56461368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56435929_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_144247.known	chr4	+	1514	10	FSM	ENSG00000128050.9	ENST00000505164.5	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	900.532188332112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGCTGACAAGAAAAT	-3	True	NA	-88	True	NA	NA	NA	56435751	56459499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56435976_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_144253.known	chr4	+	3297	10	FSM	ENSG00000128050.9	ENST00000399688.7	3297	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1222.25839340416	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCATGGTCTCTG	-6	True	NA	25	True	ATTAAA	-18	NA	56436137	56461361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56436329_56441662_56441861_56446356_56446378_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_144254.known	chr4	+	3855	19	FSM	ENSG00000174780.17	ENST00000642900.1	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_14	71.001999624076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTTTTGGGTGTTG	1	True	NA	14	True	AATAAA	-23	NA	56467616	56503681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_144257.nic	chr4	+	896	9	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-22	20513	-22	5996	5prime_fragment	FALSE	canonical	3	502	junction_8	83.0202347322627	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATTAACCAATGCGGA	-21	True	NA	NA	False	GATAAA	-45	NA	56467594	56483168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138
transcript_144258.nic	chr4	+	803	7	ISM	ENSG00000174780.17	ENST00000505314.2	1006	12	-141	10903	-22	1326	5prime_fragment	FALSE	canonical	3	605	junction_5	61.5992875139171	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTGAGTTATTAAAAG	-21	True	NA	NA	False	AATAAA	-2	NA	56467594	56478498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378
transcript_144260.known	chr4	+	745	5	FSM	ENSG00000174780.17	ENST00000504757.2	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_4	65.8217289350561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCTCCAAGTTCCTGT	2	True	NA	NA	False	ATTAAA	-22	NA	56467617	56474508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279
transcript_144262.known	chr4	-	722	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	12	True	NA	1	True	AATAAA	-17	NA	56821701	56809860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
transcript_144263.known	chr4	-	659	4	FSM	ENSG00000128040.12	ENST00000504762.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATTCAGTTCCTACT	19	True	NA	-10	True	AATAAA	-6	NA	56821694	56809871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821502
transcript_144264.known	chr4	-	613	4	FSM	ENSG00000128040.12	ENST00000248701.8	613	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-29	True	NA	1	True	AATAAA	-17	NA	56821742	56809860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821607
transcript_144266.known	chr4	-	2218	7	FSM	ENSG00000084092.7	ENST00000264230.5	2218	7	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	22.5419362275934	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTTTCTTTTTTCTT	-11	True	NA	-9	True	AATAAA	-14	NA	56977606	56963349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56963662_56964405_56964527_56966619_56966737_56968383_56968516_56973147_56973354_56973857_56974023_56976441
transcript_144271.known	chr4	+	7309	4	FSM	ENSG00000084093.19	ENST00000309042.12	7309	4	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_1	43.4920171474669	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTTTGTTTATTATT	-13	True	NA	9	True	AATAAA	-14	NA	56907899	56935844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56908214_56910629_56911537_56919786_56919871_56929840
transcript_144273.nic	chr4	+	1942	4	NIC	ENSG00000084093.19	novel	7069	5	NA	NA	375	-1964	intron_retention	FALSE	canonical	3	64	junction_1	132.033665740556	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGTGGCTGGAAAGAA	-4	True	NA	NA	False	AATAAA	-2	NA	56908468	56930220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_56909040_56910629_56911537_56919786_56919871_56929840
transcript_144274.known	chr4	+	7371	4	FSM	ENSG00000084093.19	ENST00000675105.1	7371	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	158.896891795347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	181	False	NA	-13	True	NA	NA	NA	56909189	56935822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56909588_56910629_56911537_56919786_56919871_56929840
transcript_144278.known	chr4	+	4108	26	FSM	ENSG00000047315.17	ENST00000381227.5	4108	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	115.020373847419	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	1	True	NA	32	True	AATAAA	-16	NA	56977741	57031158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56977809_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_14428.known	chr1	-	804	8	FSM	ENSG00000185499.17	ENST00000368390.7	804	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.65892813567591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	9236	False	NA	NA	False	NA	NA	NA	155192867	155186122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188232_155192182_155192284_155192785
transcript_144284.known	chr4	+	870	1	FSM	ENSG00000243199.1	ENST00000466377.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	18	False	NA	NA	False	NA	NA	NA	65573458	65574328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_65573500_65574300
transcript_144285.known	chr4	+	422	2	FSM	ENSG00000250846.6	ENST00000514260.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTTAGTCATCTCTG	939	False	NA	NA	False	AATAAA	-18	NA	65670529	65693386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_65670674_65693108
transcript_144287.known	chr4	-	6823	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	13.3041346956501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGTGTAAATTTAAG	-10	True	NA	-11	True	AATAAA	-23	NA	67545503	67468761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_144288.nic	chr4	-	2565	15	ISM	ENSG00000145241.11	ENST00000273853.11	6823	19	-60	24169	-60	474	5prime_fragment	FALSE	canonical	3	70	junction_11	12.6062828520916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTGGAAAAGTCAACAAAA	-1	True	NA	NA	False	AAGAAA	-2	NA	67545563	67492930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_144289.nic	chr4	-	1468	8	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-60	20853	-60	-2208	5prime_fragment	FALSE	canonical	3	70	junction_4	10.8062717994728	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAAGAAAATTCATGGC	-1	True	NA	NA	False	TATAAA	-8	NA	67545563	67514257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_14429.known	chr1	-	1032	8	FSM	ENSG00000185499.17	ENST00000368392.7	1032	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	3.65892813567591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGGGCTCATGCCTG	9210	False	NA	NA	False	NA	NA	NA	155192893	155185947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188232_155192182_155192311_155192785
transcript_144293.nic	chr4	-	614	6	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-60	26023	-60	-7378	5prime_fragment	FALSE	canonical	3	70	junction_2	10.4307238483242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCAAGTAGAAACATAAAT	-1	True	NA	NA	False	AATACA	-17	NA	67545563	67519427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_144295.known	chr4	-	9540	33	FSM	ENSG00000033178.13	ENST00000322244.10	9540	33	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_25	23.2452742173006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGCACATTTTTTTAA	-9	True	NA	-8	True	AATAAA	-21	NA	67701155	67612651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67619133_67622830_67622926_67623134_67623223_67624125_67624254_67624993_67625188_67626359_67626478_67629070_67629143_67630465_67630536_67631707_67631772_67631856_67631909_67633344_67633474_67634241_67634323_67634428_67634519_67635452_67635559_67638942_67639125_67641150_67641229_67644697_67644779_67645937_67646017_67646723_67646792_67649067_67649212_67662188_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_144299.known	chr4	-	2387	11	FSM	ENSG00000033178.13	ENST00000429659.7	2387	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	29.8008389143661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	-2	True	NA	NA	False	NA	NA	NA	67701148	67662486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_14430.known	chr1	-	859	8	FSM	ENSG00000185499.17	ENST00000337604.6	859	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.65892813567591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	9235	False	NA	NA	False	NA	NA	NA	155192868	155186122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188286_155192182_155192284_155192785
transcript_144300.known	chr4	+	2595	3	FSM	ENSG00000248049.8	ENST00000654961.1	2595	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	12.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTCCAAATATTTTA	-11	True	NA	-9	True	NA	NA	NA	67701260	67723217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_67701485_67720421_67721052_67721476
transcript_144304.known	chr4	+	2233	2	FSM	ENSG00000248049.8	ENST00000506606.1	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCTATTTGCGCTGGT	-36	True	NA	6	True	ATTAAA	-14	NA	67701332	67722502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_67701485_67720421
transcript_144306.known	chr4	+	1609	4	FSM	ENSG00000248049.8	ENST00000664183.1	1609	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	11.8602979164381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGACTCTGTCTAAA	-32	True	NA	NA	False	NA	NA	NA	67701336	67732722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_67701485_67728539_67728687_67730073_67730171_67731505
transcript_144307.known	chr4	-	6233	17	FSM	ENSG00000083896.13	ENST00000344157.9	6233	17	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_16	45.3650126749679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTCTTAAACACAGACT	15	False	68350105	NA	False	AATAAA	-26	NA	68350090	68310386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_144308.known	chr4	-	2983	17	FSM	ENSG00000083896.13	ENST00000579690.5	2983	17	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	58.7084959780099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATCTTTTGTATCTTTT	28	True	NA	-25	True	AATAAA	-16	NA	68349753	68313323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318754_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_144311.nic	chr4	-	978	4	ISM	ENSG00000083896.13	ENST00000355665.7	3244	16	-5	23952	-4	493	5prime_fragment	FALSE	canonical	3	178	junction_3	15.121728296285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGTAGAAGAAGATGCA	11	False	68350105	-21	True	NA	NA	NA	68350094	68337272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_68337451_68337571_68337901_68338282_68338385_68349725
transcript_144312.nic	chr4	-	659	3	ISM	ENSG00000083896.13	ENST00000355665.7	3244	16	-58	24445	-57	0	5prime_fragment	FALSE	canonical	3	178	junction_2	10	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCAGCCACAGAGTAT	NA	False	NA	-36	True	NA	NA	NA	68350147	68337765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_68337901_68338282_68338385_68349725
transcript_144313.nic	chr4	-	513	2	ISM	ENSG00000083896.13	ENST00000355665.7	3244	16	-58	24973	-57	-454	5prime_fragment	FALSE	canonical	3	178	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAAGGGTATGTAAG	NA	False	NA	-12	True	GATAAA	-3	NA	68350147	68338293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_68338385_68349725
transcript_144314.known	chr4	+	2020	1	FSM	ENSG00000132467.4	ENST00000254803.4	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATATGTTCTGTGTGGT	-5	True	NA	10	True	AATAAA	-22	NA	70688531	70690551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_70688500_70690600
transcript_144318.nic	chr4	+	1892	13	NIC	ENSG00000018189.13	novel	2143	12	NA	NA	-119	347	combination_of_known_junctions	FALSE	canonical	3	92	junction_12	19.8997487421324	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGAGGGGGTAGCTTGA	-5	True	NA	NA	False	NA	NA	NA	70704681	70793904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_70705295_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494_70789593_70793784
transcript_144325.known	chr4	-	2491	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	232.07948829849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	3747	False	NA	-9	True	AATAAA	-32	NA	70839503	70819757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
transcript_144326.known	chr4	-	6610	10	FSM	ENSG00000132463.15	ENST00000254799.11	6610	10	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_5	69.9181178942665	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGTGAACCTACATT	-6	True	NA	-10	True	AATAAA	-21	NA	70839890	70815782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
transcript_144335.known	chr4	-	1765	10	FSM	ENSG00000132463.15	ENST00000514161.5	1765	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	228.456657693411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAATTTTGCTGTATT	3907	False	NA	NA	False	NA	NA	NA	70839343	70820374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839176
transcript_144342.known	chr4	-	3561	9	FSM	ENSG00000132463.15	ENST00000505068.5	3561	9	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_4	73.8884294054218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACCTAAGAGTATTTAT	3353	False	NA	-7	True	AATAAA	-23	NA	70839897	70819530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
transcript_144353.known	chr4	-	2682	11	NNC	ENSG00000132463.15	novel	6610	10	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	222.484359000807	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTACCTAAGAGTATTT	4	True	NA	-9	True	AATAAA	-21	NA	70839880	70819532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470_70839554_70839721
transcript_144354.known	chr4	+	2506	7	FSM	ENSG00000156136.10	ENST00000286648.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	10.6926766215636	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	50	True	NA	27	True	AATAAA	-31	NA	70993648	71030914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_70993927_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_144356.known	chr4	+	2683	7	FSM	ENSG00000156136.10	ENST00000503359.5	2683	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	91.7637364830647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	-36	True	NA	27	True	AATAAA	-31	NA	70993562	71030914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_70994018_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_144362.nnic	chr4	-	2477	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1169043222683	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGTCATTTCTTTGA	-33	True	NA	-10	True	AATAAA	-19	NA	73069763	73056083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73057234_73057902_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_144368.known	chr4	-	1083	6	FSM	ENSG00000163626.17	ENST00000510031.1	1083	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	15.3022874107109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTTCCAATAATTTTG	4	True	NA	NA	False	AAGAAA	-5	NA	73069726	73058113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068134_73069316
transcript_14437.known	chr1	-	477	5	FSM	ENSG00000163463.13	ENST00000497317.5	477	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	676.116299167532	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	28	True	NA	-10	True	AATAAA	-15	NA	155173254	155169407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169786_155169858_155172564_155172629_155172737_155172893_155173220
transcript_144374.nic	chr4	-	4981	25	ISM	ENSG00000132466.20	ENST00000358602.9	10797	34	-365	29087	-365	0	5prime_fragment	FALSE	canonical	0	0	junction_6	50.497094938444	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAACTAGAAGAAATT	-34	True	NA	51	True	AAAAAG	-36	NA	73259163	73102462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_14438.known	chr1	-	598	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	692.344567394011	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5462	False	NA	-10	True	AATAAA	-15	NA	155173475	155169407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
transcript_144381.nic	chr4	-	4228	24	ISM	ENSG00000132466.20	ENST00000330838.10	7734	33	-365	26777	-365	0	5prime_fragment	FALSE	canonical	0	0	junction_6	56.2306887666178	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAACTAGAAGAAATT	-34	True	NA	51	True	AAAAAG	-36	NA	73259163	73102462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_144392.nic	chr4	-	3050	16	NNC	ENSG00000132466.20	novel	10797	34	NA	NA	-365	21136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.9243038791406	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGGAGGAACAAATTCAG	-34	True	NA	NA	False	NA	NA	NA	73259163	73140055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73140284_73141740_73141844_73142241_73142386_73142639_73142750_73142754_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_144397.known	chr4	+	2426	15	FSM	ENSG00000081051.8	ENST00000395792.7	2426	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.087297891605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCATCAATTAAATTT	-2	True	NA	NA	False	AATATA	-6	NA	73436220	73456174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73436348_73437159_73437212_73438173_73438307_73440601_73440814_73442295_73442429_73443346_73443445_73444992_73445123_73447461_73447677_73449334_73449468_73450035_73450134_73450614_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_144398.known	chr4	+	728	5	FSM	ENSG00000081051.8	ENST00000508838.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.2346843032422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTTATCACAGAAATAA	2895	False	NA	-28	True	GATAAA	-16	NA	73450548	73455741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_144399.known	chr4	+	476	4	FSM	ENSG00000081051.8	ENST00000506820.1	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30.0998338865848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	2744	False	NA	8	True	AATAAA	-16	NA	73453489	73455777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73453631_73453764_73453898_73455235_73455291_73455630
transcript_14440.known	chr1	-	578	4	FSM	ENSG00000163463.13	ENST00000471891.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_3	229.858410524586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	31	True	NA	-11	True	AATAAA	-14	NA	155173251	155169408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172893_155173220
transcript_144400.known	chr4	-	5882	11	FSM	ENSG00000169435.14	ENST00000307439.10	5882	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	4.34050688284214	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTCCCTGATATAG	-16	True	NA	NA	False	ATTAAA	-16	NA	73620436	73571549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73582188_73582291_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_144404.known	chr4	+	1537	4	FSM	ENSG00000124875.10	ENST00000226317.10	1537	4	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_2	4.18993502999218	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTGTTTCTCCTTCT	1	True	NA	14	True	AATAAA	-15	NA	73836677	73838760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73836860_73836963_73837097_73837202_73837287_73837622
transcript_144406.known	chr4	+	1174	4	FSM	ENSG00000163739.5	ENST00000395761.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAATTTTTTAATTGT	0	True	NA	NA	False	NA	NA	NA	73869392	73871308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73869571_73869668_73869793_73869905_73869990_73870520
transcript_144407.known	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	13.1993265821489	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	1	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
transcript_144408.known	chr4	-	1075	4	FSM	ENSG00000163734.4	ENST00000296026.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.24933858267454	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGTGGTTTTTCAAA	-1	True	NA	NA	False	AATAAA	-18	NA	74038689	74036588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_74037278_74038092_74038177_74038289_74038414_74038511
transcript_144409.known	chr4	-	1115	4	FSM	ENSG00000081041.9	ENST00000508487.3	1115	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTGTTTTATTTT	-1	True	NA	NA	False	AATAAA	-14	NA	74099195	74097039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_74097772_74098600_74098685_74098798_74098923_74099020
transcript_144413.known	chr4	+	468	3	FSM	ENSG00000163738.19	ENST00000484725.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	78	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCAGGGCGGGATAT	38	False	NA	NA	False	NA	NA	NA	74158174	74162106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74158282_74160054_74160089_74161779
transcript_144415.known	chr4	+	2363	2	FSM	ENSG00000163738.19	ENST00000461101.1	2363	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCATCTTGCTGCTTT	-19	True	NA	27	True	ATTAAA	-19	NA	74158117	74162253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74158282_74160054
transcript_144419.known	chr4	+	5011	4	FSM	ENSG00000169116.11	ENST00000307428.7	5011	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTGTGGGTGATTC	-3	True	NA	14	True	ATTAAA	-16	NA	74933115	75050113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74933371_75012424_75013151_75033882_75033962_75046162
transcript_14442.known	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_3	13.6950923894494	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5699	False	NA	-10	True	AATAAA	-15	NA	155173238	155169407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
transcript_144421.known	chr4	+	4308	3	FSM	ENSG00000169116.11	ENST00000513238.5	4308	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGTGGGTGATTCAC	10	False	NA	16	True	ATTAAA	-18	NA	74933094	75050115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74933371_75033882_75033962_75046162
transcript_144424.known	chr4	-	4408	9	FSM	ENSG00000163743.14	ENST00000324439.10	4408	9	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_6	19.6941457037364	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTACCCTTTGATCA	6	True	NA	1	True	AGTAAA	-24	NA	75514403	75479032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_144425.known	chr4	-	1011	9	FSM	ENSG00000163743.14	ENST00000512706.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	209.175763414407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCATATTACAAGTA	-21	True	NA	NA	False	NA	NA	NA	75514430	75482412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514240
transcript_144426.known	chr4	-	1304	9	FSM	ENSG00000163743.14	ENST00000505105.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	213.063920866486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAGAAAGTTTTTT	-8	True	NA	-13	True	AATAAA	-14	NA	75514312	75482007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490664_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_144427.known	chr4	-	1123	9	FSM	ENSG00000163743.14	ENST00000504085.5	1123	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	274.731687287797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACTGTGCTTGTGTT	6	True	NA	NA	False	NA	NA	NA	75514403	75482341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490702_75491582_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514196
transcript_14443.known	chr1	-	414	3	FSM	ENSG00000163463.13	ENST00000482246.5	414	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	588.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	14	True	NA	-11	True	AATAAA	-14	NA	155173268	155169408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169620_155172737_155172893_155173220
transcript_144433.known	chr4	+	1134	6	FSM	ENSG00000174796.12	ENST00000507556.5	1134	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	23.6643191323985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAGCATAAACAGGGCA	0	True	NA	NA	False	NA	NA	NA	75514472	75542959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75539858_75539960_75542408
transcript_144435.known	chr4	+	3549	5	FSM	ENSG00000174796.12	ENST00000311638.7	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	17.5695048308141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	0	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_144439.known	chr4	+	1161	5	FSM	ENSG00000174796.12	ENST00000514480.1	1161	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.0705439901187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTCATGTTACGTTC	47	False	NA	NA	False	NA	NA	NA	75514519	75527214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514992_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_14444.known	chr1	-	3145	23	FSM	ENSG00000169231.13	ENST00000368378.7	3145	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.557438524302	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	20	True	NA	-3	True	CATAAA	-19	NA	155207897	155195587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155204854_155204958_155205059_155205317_155206199_155206407_155207797
transcript_144440.known	chr4	+	655	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	13.4742552876052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATATGTAGTTCACT	16	True	NA	NA	False	AATAGA	-16	NA	75514488	75522050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
transcript_144441.nic	chr4	-	1492	8	ISM	ENSG00000138769.11	ENST00000429927.6	3383	12	190	20114	2	0	5prime_fragment	FALSE	canonical	3	9	junction_1	2.24971653543195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCCTTAGTTGAAGA	-16	True	NA	NA	False	AAAAAG	-6	NA	75630526	75598118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75598213_75600280_75600370_75603816_75603957_75605521_75605635_75607182_75607362_75614254_75614450_75625820_75626018_75630041
transcript_144443.known	chr4	+	4135	26	FSM	ENSG00000138768.15	ENST00000264904.8	4135	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	413.006762172243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	18	False	NA	18	True	AATAAA	-19	NA	75724597	75814286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75760593_75760606_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75795335_75795357_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_144445.known	chr4	+	4123	24	FSM	ENSG00000138768.15	ENST00000514213.7	4123	24	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_14	186.188452613417	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	-3	True	NA	18	True	AATAAA	-19	NA	75724576	75814286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_144453.nic	chr4	+	2209	17	ISM	ENSG00000138768.15	ENST00000514213.7	4123	24	-55	13161	-55	-5430	5prime_fragment	TRUE	canonical	3	741	junction_14	138.473372891686	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGGTGAAAAAAAC	NA	False	NA	23	True	GATAAA	-4	NA	75724521	75801125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078
transcript_144459.known	chr4	-	4321	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	920.606914436933	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	-21	True	NA	-20	True	AATAAA	-19	NA	75673411	75642785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_144460.known	chr4	-	5327	12	FSM	ENSG00000138757.15	ENST00000678062.1	5327	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	1038.46358220703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724548	75641848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_144461.known	chr4	-	5189	12	FSM	ENSG00000138757.15	ENST00000677583.1	5189	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	963.60151738025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	49	True	NA	NA	False	NA	NA	NA	75724377	75641848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_144462.known	chr4	-	5390	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_11	913.854003928345	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724589	75641848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_14447.known	chr1	-	3200	22	FSM	ENSG00000169231.13	ENST00000541576.5	3200	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	9.72921355361686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGTGCAACTGCTTAT	1195	False	NA	-5	True	CATAAA	-17	NA	155207981	155195589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155204854_155204958_155205059_155205317_155206199_155206407_155207797
transcript_144472.known	chr4	-	5142	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	739.794998631378	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	185	False	NA	NA	False	NA	NA	NA	75673205	75641848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_144473.known	chr4	-	2609	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_4	263.269063887119	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTAGCATATTATTTAT	-11	True	NA	-36	True	AGTAAA	-2	NA	75673401	75644388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_144474.known	chr4	-	5155	11	FSM	ENSG00000138757.15	ENST00000678122.1	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_10	677.631787920254	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-49	True	NA	NA	False	NA	NA	NA	75724475	75641848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_144479.known	chr4	-	2592	11	FSM	ENSG00000138757.15	ENST00000677125.1	2592	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	751.923460200571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTGTTCTTCAGT	NA	False	NA	-23	True	AGTAAA	-15	NA	75673614	75644375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673450
transcript_144490.nic	chr4	-	882	6	ISM	ENSG00000138757.15	ENST00000357854.7	2609	11	-194	11454	19	0	5prime_fragment	FALSE	canonical	3	2255	junction_5	225.9424705539	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGACAACCATCTC	NA	False	NA	10	True	NA	NA	NA	75673595	75655842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_144495.nic	chr4	-	680	5	ISM	ENSG00000138757.15	ENST00000357854.7	2609	11	-20	12535	-4	0	5prime_fragment	FALSE	canonical	3	2255	junction_4	229.196967693728	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGTTACTTTGAAGATA	-31	False	NA	0	True	NA	NA	NA	75673421	75656923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_14450.known	chr1	-	2727	21	FSM	ENSG00000169231.13	ENST00000457183.6	2727	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	9.76665244595097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAGGGGTATTACTCA	0	True	NA	-81	True	NA	NA	NA	155207917	155195665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155206199_155206407_155207797
transcript_144506.known	chr4	-	678	2	FSM	ENSG00000138757.15	ENST00000507701.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCGACCTTTATTTCAT	0	True	NA	NA	False	NA	NA	NA	75673350	75661514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75662050_75673207
transcript_144508.known	chr4	-	2441	2	FSM	ENSG00000138757.15	ENST00000677094.1	2441	2	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACATATAATCAAAATT	-1	True	NA	NA	False	CATAAA	-37	NA	75724427	75721887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75724177_75724275
transcript_144511.known	chr4	-	3003	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_13	40.2941564946959	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACCTTTGTATGTGGAGT	-4	True	NA	-11	True	AATAAA	-20	NA	75990945	75949914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_144513.known	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_20	93.5116857625273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	3	True	NA	-2	True	AATAAA	-29	NA	75990938	75949905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_144516.nic	chr4	-	2060	21	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-15	6135	2	4072	5prime_fragment	FALSE	canonical	3	349	junction_12	41.2485151247896	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAACTTTATGATGAT	-19	True	NA	NA	False	AATAAA	-13	NA	75990960	75956049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_144520.known	chr4	-	1859	11	FSM	ENSG00000138744.16	ENST00000286733.9	1859	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	17.8720452103278	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGCGTTATGCTCTCCCT	-15	True	NA	NA	False	AATAAA	-16	NA	75941013	75913659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75914339_75914867_75914986_75918760_75918790_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
transcript_144529.known	chr4	-	1300	9	FSM	ENSG00000138744.16	ENST00000507956.5	1300	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	19.2349779048482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAATTAGTCAGTAT	25	True	NA	NA	False	AAAAAG	-5	NA	75940973	75917466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75917774_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
transcript_144531.nic	chr4	-	904	9	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-15	21470	2	0	5prime_fragment	FALSE	canonical	3	426	junction_8	21.8789282187222	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-19	True	NA	-28	True	AAGAAA	-21	NA	75990960	75971384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_144533.nic	chr4	-	979	9	ISM	ENSG00000198301.12	ENST00000395710.5	3080	22	-22	21479	2	0	5prime_fragment	FALSE	canonical	3	41	junction_7	142.147755434266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-19	True	NA	-28	True	AAGAAA	-21	NA	75990960	75971384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_144545.nnic	chr4	-	2253	12	NIC	ENSG00000138750.15	novel	2249	12	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_11	185.627414974412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	580	False	NA	-5	True	AATAAA	-24	NA	76147849	76114663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76147755
transcript_144546.known	chr4	-	2249	12	FSM	ENSG00000138750.15	ENST00000264883.8	2249	12	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_8	48.084120503843	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	-2	True	NA	-5	True	AATAAA	-24	NA	76148397	76114663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_144548.known	chr4	-	1563	11	FSM	ENSG00000138750.15	ENST00000514987.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	195.27521604136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCACCTCACAGCTC	-2	True	NA	NA	False	NA	NA	NA	76148397	76115205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144389_76144474_76148307
transcript_144549.known	chr4	-	1385	11	FSM	ENSG00000138750.15	ENST00000512151.5	1385	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	193.577374710993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACCGACCACATGGA	-2	True	NA	NA	False	NA	NA	NA	76148397	76115300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_144550.nic	chr4	-	2257	11	NIC	ENSG00000138750.15	novel	2249	12	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	194.573996207099	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	NA	False	NA	-5	True	AATAAA	-24	NA	76148513	76114663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_76115495_76117663_76117775_76118074_76118195_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_144561.known	chr4	-	4694	12	FSM	ENSG00000138760.11	ENST00000264896.8	4694	12	0	0	0	0	multi-exon	TRUE	canonical	3	223	junction_8	25.1264570318859	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTAGAAGTCATATGT	0	True	NA	-21	True	AATAAA	-19	NA	76213824	76158736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76213426
transcript_144563.known	chr4	-	4507	12	FSM	ENSG00000138760.11	ENST00000638295.1	4507	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	83.2993208826106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAACCACTTTATATA	-7	True	NA	-44	True	AATGAA	-12	NA	76234536	76158759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76234302
transcript_144564.known	chr4	-	5817	11	FSM	ENSG00000138760.11	ENST00000638680.1	5817	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_8	25.9722929291967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGGCCCTCTGGACAT	-12	True	NA	NA	False	TTTAAA	-37	NA	76213876	76158913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76181102_76195706_76195865_76213426
transcript_144566.known	chr4	+	1533	8	FSM	ENSG00000189157.14	ENST00000424749.7	1533	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.04067843196171	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCTATTGCCTTTTTC	1	True	NA	NA	False	AATAAA	-23	NA	76251720	76283783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268769_76271567_76271769_76278068_76278225_76280263_76280342_76283380
transcript_144571.known	chr4	+	1465	3	FSM	ENSG00000272414.6	ENST00000514365.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCAAGCTTGAGCCTTT	12	True	NA	NA	False	AAAACA	-16	NA	76251731	76310379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76251821_76263703_76263844_76309143
transcript_144572.known	chr4	-	2552	3	FSM	ENSG00000138760.11	ENST00000502908.2	2552	3	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTCTAAAAAAGCCAAAAAA	105	False	NA	NA	False	NA	NA	NA	76213796	76179077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76181102_76195706_76195865_76213426
transcript_144574.known	chr4	+	2244	2	FSM	ENSG00000118804.9	ENST00000237642.7	2244	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTCTGAATTATTTG	-1	True	NA	11	True	AATAAA	-22	NA	76306732	76311130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76306990_76309143
transcript_144576.nic	chr4	+	6639	10	NIC	ENSG00000138771.16	novel	3766	4	NA	NA	-225	614	combination_of_known_junctions	FALSE	canonical	3	75	junction_2	23.9464422987097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTTGAGCGTGAAGACT	-6	True	NA	17	True	AATGAA	-18	NA	76689345	76779791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_76689703_76710155_76710288_76730803_76730936_76738760_76741927_76749016_76749091_76754310_76755193_76756448_76756938_76759544_76759696_76770625_76770899_76778808
transcript_144579.known	chr4	+	628	3	FSM	ENSG00000138771.16	ENST00000466541.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGCAGCCATGTACC	20	False	NA	5	True	AATAAA	-23	NA	76436145	76559576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76436221_76555608_76555764_76559178
transcript_144581.known	chr4	-	3993	1	FSM	ENSG00000186212.4	ENST00000334306.4	3993	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTGATTACTGTTTT	-2	True	NA	NA	False	ATTAAA	-30	NA	76898144	76894151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76894200_76898100
transcript_144584.known	chr4	+	5545	10	FSM	ENSG00000138758.12	ENST00000264893.11	5545	10	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	45.9172632212373	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGCCCTTTTTTGTG	-1	True	NA	32	True	CATAAA	-33	NA	76949751	77038615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782_77030971_77034496
transcript_14459.known	chr1	+	1085	8	FSM	ENSG00000173171.15	ENST00000609421.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	48.6964776834579	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTCAAACATTTTCTCC	5	True	NA	NA	False	AATAAA	-16	NA	155209246	155213824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212126_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_144591.known	chr4	+	2615	9	FSM	ENSG00000138758.12	ENST00000502584.5	2615	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	46.9813792900975	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGAGAGAGTTTTAAA	-2	True	NA	NA	False	AATAAA	-19	NA	76949750	77032158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782
transcript_144594.nic	chr4	+	1259	8	ISM	ENSG00000138758.12	ENST00000502584.5	2615	9	-85	3462	-85	-2140	5prime_fragment	FALSE	canonical	3	551	junction_6	36.8349878041328	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACAAATGTTTGTTATG	629	False	NA	NA	False	AAAAAG	-42	NA	76949665	77028696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628
transcript_14460.known	chr1	+	946	8	FSM	ENSG00000173171.15	ENST00000424959.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	279.096208998888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGACCCTGGGCATGGC	-4	True	NA	NA	False	NA	NA	NA	155209237	155213656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155209333_155210345_155210436_155210547_155210628_155212126_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_144603.known	chr4	-	2759	7	FSM	ENSG00000118816.11	ENST00000237654.9	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_5	76.7667824575766	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTTGTGACTTTT	-4	True	NA	-6	True	AATAAA	-14	NA	77075989	77047154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_77048663_77055149_77055381_77055961_77056103_77056248_77056324_77058506_77058636_77066248_77066406_77075471
transcript_144628.known	chr4	+	5471	8	FSM	ENSG00000138764.15	ENST00000316355.10	5471	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.3371342165866	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGGTTATATGCTTCC	-15	True	NA	13	True	AATAAA	-20	NA	77157206	77170060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_77157507_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
transcript_144631.known	chr4	+	1175	9	FSM	ENSG00000169288.18	ENST00000315567.13	1175	9	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_5	37.2573398808879	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	-3	True	NA	18	True	AATAAA	-19	NA	77862829	77952785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_77862880_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_144638.nic	chr4	+	417	3	ISM	ENSG00000169288.18	ENST00000315567.13	1175	9	-179	69468	-179	-181	5prime_fragment	FALSE	canonical	3	391	junction_1	43.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATCCCTATATGGAAGG	503	False	NA	NA	False	AATAAA	-2	NA	77862650	77883317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_77862880_77871743_77871856_77883241
transcript_144643.nnic	chr4	+	3909	21	NNC	ENSG00000138759.20	novel	7217	42	NA	NA	-376	17152	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	14.3687160177937	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGGGCTACCTTGTAAT	NA	False	NA	22	True	AATAAA	-32	NA	78056946	78355189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78354765
transcript_144644.known	chr4	+	3329	20	FSM	ENSG00000138759.20	ENST00000508900.2	3329	20	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	9.6902155295076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGACTCTCATATTAAT	-16	True	NA	NA	False	AATAGA	-33	NA	78057322	78338037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673
transcript_144649.known	chr4	+	2871	19	FSM	ENSG00000138759.20	ENST00000502446.6	2871	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	17.9698822107065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACCCAATTGCCTTTT	165	False	NA	NA	False	ATTAAA	-24	NA	78057569	78319653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78319359
transcript_144657.nic	chr4	+	1350	4	ISM	ENSG00000138759.20	ENST00000683711.1	1905	12	-743	37994	-376	-37994	5prime_fragment	FALSE	canonical	3	54	junction_3	6.59966329107444	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATGAAAAGAAAATCCATG	NA	False	NA	NA	False	NA	NA	NA	78056946	78245303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232
transcript_144658.nnic	chr4	+	2816	3	NIC	ENSG00000138759.20	novel	2297	4	NA	NA	-376	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTTAATTGTACATATT	NA	False	NA	NA	False	AATAAA	-17	NA	78056946	78072106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_78058086_78065984_78066017_78070461
transcript_144659.known	chr4	+	1524	14	FSM	ENSG00000138772.13	ENST00000503570.6	1524	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	101.894016176341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAGTTCTACTCCATTA	-18	True	NA	-35	True	NA	NA	NA	78551757	78610386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78551860_78554435_78554489_78571032_78571174_78573179_78573268_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_144661.known	chr4	+	1432	13	FSM	ENSG00000138772.13	ENST00000264908.11	1432	13	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_8	24.35658136019	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTGTTTGCTTT	-6	True	NA	26	True	AATAAA	-21	NA	78551769	78610447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78551860_78554435_78554489_78573179_78573268_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_144663.known	chr4	+	1335	12	FSM	ENSG00000138772.13	ENST00000512884.5	1335	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.084314645027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATAAAAATTGTTG	-29	True	NA	-6	True	ATTAAA	-8	NA	78551746	78610415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78551860_78554435_78554489_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_144664.known	chr4	-	9811	6	FSM	ENSG00000163291.14	ENST00000512733.5	9811	6	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_5	45.5306490179967	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTAGTGAATTTTGTC	-39	True	NA	NA	False	AATACA	-18	NA	78939438	78911877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78935120_78935284_78939039
transcript_144665.known	chr4	-	3370	5	FSM	ENSG00000163291.14	ENST00000515853.5	3370	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	127.758316754722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAACTGCTGCTTGT	-1	True	NA	NA	False	AATAAA	-15	NA	78939224	78917941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78939039
transcript_14467.known	chr1	+	1441	7	FSM	ENSG00000173171.15	ENST00000316721.8	1441	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	277.143614996509	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	28	True	NA	NA	False	AATAAA	-15	NA	155208796	155213823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_144670.known	chr4	-	8419	17	FSM	ENSG00000163297.18	ENST00000403729.7	8419	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	5.3370755100523	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTCTGAAAGTCTCTG	-7	True	NA	NA	False	AATAAA	-31	NA	80073229	79901145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_79907468_79977620_79977702_79978006_79978175_79983877_79983971_79984818_79984864_80008520_80008617_80018897_80018977_80031622_80031693_80033471_80033571_80035971_80036033_80054271_80054353_80055149_80055219_80055359_80055468_80055931_80056014_80069435_80069508_80071582_80071655_80072408
transcript_144672.known	chr4	-	2941	14	FSM	ENSG00000138670.19	ENST00000264400.7	2941	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	11.9153821323928	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGCGTCTTTCTTTTC	2	True	NA	0	True	AATATA	-22	NA	81471907	81426392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448285_81456650_81456789_81457498_81457622_81459331_81459515_81471769
transcript_144679.known	chr4	-	3068	9	FSM	ENSG00000138668.19	ENST00000313899.12	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	3276	junction_3	1531.48771114071	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTCCCTCTGTCGTT	-14	True	NA	-5	True	AATAAA	-18	NA	82373991	82352497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
transcript_14468.known	chr1	+	2579	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_5	38.9001570976548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	9	True	NA	NA	False	AATAAA	-15	NA	155209250	155213823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_144691.known	chr4	-	1667	8	FSM	ENSG00000138668.19	ENST00000352301.8	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	1908	junction_7	2114.08190137333	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-6	True	NA	30	True	AATAAA	-12	NA	82373983	82353833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_144692.known	chr4	-	1585	8	FSM	ENSG00000138668.19	ENST00000353341.8	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	4190	junction_2	1238.97880926024	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-9	True	NA	-29	True	AATAAA	-17	NA	82373986	82353828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
transcript_144703.nic	chr4	-	1676	7	NIC	ENSG00000138668.19	novel	1585	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	1908	junction_6	2046.59093915277	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-6	True	NA	-29	True	AATAAA	-17	NA	82374134	82353828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_144721.known	chr4	+	612	1	FSM	ENSG00000272677.2	ENST00000609552.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTGTTCGGGTT	0	True	NA	19	True	TATAAA	-26	NA	82374300	82374912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82374300_82374900
transcript_144723.known	chr4	-	1433	10	FSM	ENSG00000152795.18	ENST00000630114.2	1433	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	1194.30684478746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTTTTCTGCGTCAGG	31	True	NA	27	True	AATAAA	-14	NA	82430408	82424629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_144726.known	chr4	-	2356	9	FSM	ENSG00000152795.18	ENST00000502762.4	2356	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	1068.79446544927	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	320	False	NA	-27	True	AATAAA	-15	NA	82430401	82424628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_144729.known	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	889.931317574564	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	322	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_144734.known	chr4	-	1291	8	FSM	ENSG00000152795.18	ENST00000602300.5	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	2074	junction_1	291.866128104468	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	-4	True	NA	-27	True	AATAAA	-15	NA	82429441	82424628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_144735.known	chr4	-	2404	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	2322	junction_4	218.13483343005	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	1324	False	NA	-23	True	AATAAA	-19	NA	82429397	82424624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_144736.known	chr4	-	3968	7	FSM	ENSG00000152795.18	ENST00000614627.4	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	883.3912716848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGGATAAGCAGAGCTT	2	True	NA	-20	True	ATTAAA	-23	NA	82430225	82422564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82426036_82426130_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_144743.known	chr4	+	2083	6	FSM	ENSG00000145293.17	ENST00000273920.8	2083	6	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	93.3565209291777	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTATCATGTGTGTGTT	-9	True	NA	22	True	AAAACA	-24	NA	82430589	82461177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82430914_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_144751.known	chr4	+	1874	6	FSM	ENSG00000145293.17	ENST00000509635.5	1874	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	218.934328052957	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTGATTAATAAAAGC	4	True	NA	-17	True	NA	NA	NA	82430647	82461055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82430885_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_144752.known	chr4	+	1689	5	FSM	ENSG00000145293.17	ENST00000505846.5	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	312.805450719772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	18	False	NA	15	True	AATAAA	-16	NA	82430661	82461087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82430885_82447919_82448022_82454721_82454855_82456914_82457039_82459980
transcript_144753.known	chr4	-	3178	8	FSM	ENSG00000249242.8	ENST00000449862.7	3178	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	6.1145527311522	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTGTCTCTT	-12	True	NA	-6	True	AATAAA	-17	NA	82561988	82483175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
transcript_144755.known	chr4	-	3296	8	FSM	ENSG00000249242.8	ENST00000515780.6	3296	8	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_7	19.4558631842665	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCTCTTACACCA	8285	False	NA	0	True	AATAAA	-23	NA	82562357	82483169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82562162
transcript_14476.known	chr1	+	923	4	FSM	ENSG00000231064.8	ENST00000447623.3	1156	4	7	226	3	71	multi-exon	FALSE	canonical	2	8	junction_1	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCCCTATTTCACAGA	5	False	NA	NA	False	NA	NA	NA	155195003	155200346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155195369_155196850_155197018_155198402_155198619_155200171
transcript_144760.known	chr4	-	3040	5	FSM	ENSG00000145284.12	ENST00000319540.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTTGTCCAGATA	-22	True	NA	-5	True	AATAAA	-15	NA	82798796	82629538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82631518_82636590_82636824_82680706_82680913_82705282_82705414_82798305
transcript_144761.known	chr4	-	2742	13	FSM	ENSG00000189308.11	ENST00000505397.1	2742	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_10	14.9803111523834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTTGTATGACTTTGT	14	True	NA	NA	False	TATAAA	-20	NA	83012926	82927776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984160_82984877_83012791
transcript_144764.known	chr4	-	4254	13	FSM	ENSG00000189308.11	ENST00000442461.6	4254	13	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_11	20.8424979842202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGCATTTTTTCTTTA	2209	False	NA	NA	False	AATAAA	-24	NA	83010731	82925714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984823_82984877_83010483
transcript_144765.known	chr4	-	2257	13	FSM	ENSG00000189308.11	ENST00000510557.5	2257	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	17.8068338941355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGTCAGAAGGGGAAA	-3	True	NA	NA	False	NA	NA	NA	83012887	82927559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984823_82984877_83012791
transcript_144766.known	chr4	-	2757	11	FSM	ENSG00000189308.11	ENST00000506560.5	2757	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	24.7636830863262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATAATATCCTGTTGT	2231	False	NA	NA	False	AAAAAG	-20	NA	83010709	82927585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82984160_82984877_83010483
transcript_144771.known	chr4	-	4255	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_26	191.949358459511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	9677	False	NA	-36	True	ATTAAA	-13	NA	82891266	82818661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_144772.known	chr4	-	3801	27	FSM	ENSG00000138674.17	ENST00000508502.5	3801	27	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_5	192.148969113448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGACATGGACTAGTC	-22	True	NA	NA	False	AAGAAA	-18	NA	82891203	82819010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_144783.known	chr4	-	3861	26	FSM	ENSG00000138674.17	ENST00000509142.5	3861	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	229.04250784516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-33	True	NA	-36	True	ATTAAA	-13	NA	82891214	82818661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_144793.known	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	TRUE	canonical	3	397	junction_13	108.973206441869	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	45	True	NA	-35	True	ATTAAA	-14	NA	82891136	82818660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_144794.known	chr4	-	3596	25	FSM	ENSG00000138674.17	ENST00000505984.5	3596	25	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_5	146.546914890382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTCCAAAGAAACATG	33	True	NA	NA	False	NA	NA	NA	82891148	82819043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_1448.known	chr1	-	2199	5	FSM	ENSG00000189339.12	ENST00000481276.1	2199	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	25.1047804212664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTGGGCGTGGTGGCT	112	False	NA	NA	False	NA	NA	NA	1692709	1670424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_144803.known	chr4	-	3687	24	FSM	ENSG00000138674.17	ENST00000513858.5	3687	24	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	173.417773044061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	28	True	NA	-35	True	ATTAAA	-14	NA	82891153	82818660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_14481.known	chr1	-	1873	11	FSM	ENSG00000160766.15	ENST00000368374.5	1873	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	26.9362209673146	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	9	True	NA	NA	False	NA	NA	NA	155227422	155213824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155214474_155214567_155214685_155215053_155215163_155215562_155215652_155215761_155215788_155216383_155216622_155216856_155217030_155217239_155217374_155217963_155218050_155224876_155225088_155227381
transcript_144811.nic	chr4	-	3437	23	ISM	ENSG00000138674.17	ENST00000348405.8	4012	25	-133	5937	-3	0	5prime_fragment	FALSE	canonical	3	397	junction_11	111.247323303299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGATCTTATTCAGCGCT	9674	False	NA	NA	False	AAGAAA	-39	NA	82891269	82824597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_144815.known	chr4	-	3397	21	FSM	ENSG00000138674.17	ENST00000508479.5	3397	21	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_8	180.928411257049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAAAAATC	28	True	NA	NA	False	TTTAAA	-4	NA	82891153	82843684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_144818.nic	chr4	-	3342	19	ISM	ENSG00000138674.17	ENST00000505984.5	3596	25	-67	24641	-1	0	5prime_fragment	FALSE	canonical	3	397	junction_7	106.203450224115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAAAAATC	-34	True	NA	NA	False	TTTAAA	-4	NA	82891215	82843684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_14482.known	chr1	-	2387	12	FSM	ENSG00000177628.16	ENST00000327247.9	2387	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	27.4262346505574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-8	True	NA	NA	False	NA	NA	NA	155244670	155234451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244505
transcript_144822.known	chr4	-	3909	26	FSM	ENSG00000138674.17	ENST00000311785.11	3909	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	211.983825798102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-5	True	NA	-36	True	ATTAAA	-13	NA	82891259	82818661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_144827.known	chr4	-	1717	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_11	89.4203556244326	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGGTTGCCAGCG	-3	True	NA	NA	False	AATAAA	-14	NA	82891184	82863210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_14483.known	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.3078017090559	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	2	True	NA	NA	False	NA	NA	NA	155241249	155234451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
transcript_144838.nic	chr4	-	1862	6	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	163.666001356421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-14	True	NA	-95	True	AATAAA	-23	NA	82900563	82893544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82899712_82899738_82900076_82900224_82900333
transcript_144839.known	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	21.4767315949145	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	22	True	NA	11	True	ATTAAA	-18	NA	82900734	82919969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
transcript_144843.known	chr4	-	2770	5	FSM	ENSG00000251022.6	ENST00000504520.6	2770	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	84.6149366246882	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTGAGCAATTCAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	82900960	82893008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900333
transcript_144849.known	chr4	-	516	4	FSM	ENSG00000251022.6	ENST00000511271.5	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	159.11700796025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAACAACACGAATTCT	-17	True	NA	NA	False	NA	NA	NA	82900566	82894794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82894848_82895691_82895775_82900076_82900224_82900333
transcript_14485.known	chr1	-	2063	10	FSM	ENSG00000177628.16	ENST00000427500.7	2063	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	33.6378681375545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCGGAAGCCTTAAAGCAG	2	True	NA	NA	False	NA	NA	NA	155241275	155234558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239885_155240078_155240629_155240718_155241085
transcript_144852.nnic	chr4	-	1760	4	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	181.382346317263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-20	True	NA	-95	True	AATAAA	-23	NA	82900569	82893544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_82894848_82897988_82898063_82900076_82900224_82900333
transcript_144853.known	chr4	-	971	3	FSM	ENSG00000251022.6	ENST00000512932.5	971	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	209.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTAAAGCACAAGAGGA	-10	True	NA	NA	False	AAAACA	-29	NA	82900559	82894249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82894848_82900076_82900224_82900333
transcript_144855.known	chr4	-	683	3	FSM	ENSG00000251022.6	ENST00000513581.5	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	72	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCATTTTATTTTATT	-20	True	NA	NA	False	NA	NA	NA	82900569	82897762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82898063_82900076_82900224_82900333
transcript_144856.known	chr4	-	637	2	FSM	ENSG00000251022.6	ENST00000503704.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGTATAGCACACAAAA	-20	True	NA	NA	False	AAAACA	-26	NA	82900569	82899822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82900224_82900333
transcript_144857.known	chr4	-	4042	26	FSM	ENSG00000138674.17	ENST00000443462.6	4042	26	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_25	226.529277577977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	3	True	NA	-36	True	ATTAAA	-13	NA	82891178	82818661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82891087
transcript_144858.known	chr4	+	1702	11	FSM	ENSG00000138663.9	ENST00000503682.5	1702	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	226.856540571349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTACTTTGTTTTTAGTT	15	True	NA	15	True	AATAAA	-23	NA	83035206	83075797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83065059_83065156_83066437_83066554_83068437_83068523_83075296
transcript_144859.known	chr4	+	1695	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	224.784897179504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	33	False	NA	-26	True	NA	NA	NA	83035224	83075756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
transcript_144862.known	chr4	+	1651	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_9	62.7764994953437	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	-9	True	NA	36	True	AATAAA	-44	NA	83035182	83075818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
transcript_144864.known	chr4	-	786	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.49106001094224	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	4914	False	NA	-1	True	TATAAA	-25	NA	83109843	83090687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
transcript_144867.known	chr4	-	1639	7	FSM	ENSG00000173085.15	ENST00000311469.9	1639	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	9.56411115693571	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGGCCTTACTGTTCT	220	False	NA	-18	True	AATAAA	-13	NA	83284914	83263825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83264364_83267585_83267775_83269859_83269994_83272086_83272173_83273495_83273618_83278947_83279115_83284511
transcript_144873.known	chr4	-	4652	13	FSM	ENSG00000173083.16	ENST00000405413.6	4652	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	6.91616464041548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	25	False	NA	NA	False	AATAAA	-20	NA	83335153	83292460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555_83334814_83335047
transcript_144874.known	chr4	-	4581	12	FSM	ENSG00000173083.16	ENST00000311412.10	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	4.84981042485423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	-7	True	NA	NA	False	AATAAA	-20	NA	83334848	83292460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555
transcript_144875.known	chr4	-	932	3	FSM	ENSG00000173083.16	ENST00000680713.1	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGGGCCCTGAGTCA	377	False	NA	NA	False	NA	NA	NA	83334801	83318929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83319470_83322218_83322365_83334555
transcript_144876.known	chr4	-	3543	18	FSM	ENSG00000163312.11	ENST00000295488.8	3543	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_12	9.14663324147083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACGAATAATGTTTGA	20	True	NA	NA	False	TATAAA	-30	NA	83455823	83407345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455396
transcript_144877.nic	chr4	-	1229	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-47	45818	-15	529	5prime_fragment	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACCATAATATTAGTGCA	-27	True	NA	-10	True	AATAAA	-18	NA	83455870	83453190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_83453946_83455396
transcript_144878.known	chr4	-	744	2	FSM	ENSG00000163312.11	ENST00000440639.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCTTACTGAATTACA	20	True	NA	NA	False	AAAACA	-21	NA	83455823	83453756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83453946_83455268
transcript_144879.known	chr4	-	574	2	FSM	ENSG00000163312.11	ENST00000515482.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAGAGTGGATATGAA	-12	True	NA	NA	False	NA	NA	NA	83455855	83453719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83453946_83455507
transcript_144881.known	chr4	-	4210	9	FSM	ENSG00000163322.14	ENST00000321945.12	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	19.4277507704829	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCAATGGTAAATC	0	True	NA	-9	True	ATTAAA	-18	NA	83485100	83459516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83484985
transcript_144887.known	chr4	+	1550	6	FSM	ENSG00000163319.11	ENST00000295491.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	1552	junction_3	174.493094419235	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTGAAGTAAATGC	-4	True	NA	NA	False	AATAAA	-21	NA	83456057	83462298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972_83461033_83461120
transcript_144889.known	chr4	+	490	5	FSM	ENSG00000163319.11	ENST00000505719.1	490	5	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_3	764.934147492449	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTCCATTAAGCAGAT	28	False	NA	-63	True	NA	NA	NA	83456089	83461328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83460972_83461033_83461120
transcript_144890.known	chr4	+	666	5	FSM	ENSG00000163319.11	ENST00000507019.5	666	5	0	0	0	0	multi-exon	TRUE	canonical	3	326	junction_2	693.869359101553	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATCCCCAAATAGCT	15	False	NA	32	True	AATAAA	-26	NA	83455982	83461423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83459739_83459798_83460972_83461033_83461120
transcript_144892.known	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	860.418631959015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	-7	True	NA	34	True	AATAAA	-40	NA	83456054	83461237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
transcript_144895.known	chr4	-	3472	3	FSM	ENSG00000163623.10	ENST00000295886.5	3472	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGTTGCCTTGAATGAA	-3	True	NA	NA	False	ATTAAA	-17	NA	84499292	84491984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_84493550_84495671_84495845_84497558
transcript_144896.known	chr4	+	4309	13	FSM	ENSG00000163624.6	ENST00000295887.6	4309	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	13.8252988715937	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTTGTTGTGCCAT	14	True	NA	14	True	AATAAA	-17	NA	84583126	84651334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_84583519_84604242_84604371_84609428_84609526_84617563_84617662_84619393_84619534_84631818_84631878_84633856_84633940_84635263_84635352_84638923_84638993_84640837_84640991_84643023_84643144_84645221_84645326_84648556
transcript_14490.known	chr1	-	3190	12	FSM	ENSG00000160767.22	ENST00000361361.7	3190	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_10	14.4307981028181	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	-16	True	NA	-16	True	AATAAA	-30	NA	155255483	155247204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
transcript_144906.known	chr4	+	3278	5	FSM	ENSG00000180769.10	ENST00000652474.2	3278	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.58602010819715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATACTTTCTCTACTG	NA	False	NA	-7	True	AATAAA	-3	NA	84965629	85008730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_84965859_84969724_84969877_85000690_85000766_85004229_85004328_85006006
transcript_144907.known	chr4	+	3270	4	FSM	ENSG00000180769.10	ENST00000652207.2	3270	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATACTTTCTCTACTGT	NA	False	NA	-6	True	AATAAA	-4	NA	84965563	85008731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_84965859_84969724_84969877_85004229_85004328_85006006
transcript_144908.known	chr4	+	2740	8	FSM	ENSG00000138639.18	ENST00000395183.6	2740	8	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	20.7275819395612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	-3	True	NA	14	True	ATTAAA	-13	NA	85778705	86001223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_85778966_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_144912.nnic	chr4	+	2724	8	NNC	ENSG00000138639.18	novel	725	5	NA	NA	-39253	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	8.82251294665401	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	NA	False	NA	14	True	ATTAAA	-13	NA	85884480	86001223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_85884725_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_144917.known	chr4	-	2684	14	FSM	ENSG00000109339.24	ENST00000641166.1	2684	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	15.4598162071793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTATACCAATTTGTAGA	-6	True	NA	-26	True	ATTAAA	-6	NA	86360060	86016489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86089205_86089278_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194308_86194408_86354529_86354645_86359657
transcript_144918.known	chr4	-	2434	14	FSM	ENSG00000109339.24	ENST00000361569.8	2434	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	13.7000842220881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTATACCAATTTGTAG	8	True	NA	-27	True	ATTAAA	-5	NA	86453192	86016490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_86017376_86029196_86029288_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86453029
transcript_144921.known	chr4	+	8548	48	FSM	ENSG00000163629.13	ENST00000411767.7	8548	48	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_20	67.6750417219584	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGTGCAGACAAATTAGA	-3	True	NA	23	True	AATAAA	-31	NA	86594314	86815161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86753008_86753066_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764725_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
transcript_144925.known	chr4	+	9261	21	FSM	ENSG00000172493.23	ENST00000395146.9	9261	21	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	21.9906230016341	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGTTGAATCCATGCTT	5	True	NA	11	True	AATAAA	-16	NA	86935010	87141039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
transcript_144927.known	chr4	+	9625	20	FSM	ENSG00000172493.23	ENST00000544085.6	9625	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	27.3102620916106	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGGGGTTGAATCCAT	4	True	NA	7	True	AATAAA	-12	NA	87006752	87141035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87007425_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
transcript_144936.known	chr4	+	3460	19	FSM	ENSG00000172493.23	ENST00000674009.1	3460	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	34.2543590089073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTCTCGTACTCTTAAT	-5	True	NA	NA	False	AAAAAG	-13	NA	86935042	87132332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126107_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270
transcript_144942.known	chr4	-	898	4	FSM	ENSG00000284968.1	ENST00000506484.1	898	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGATATAGTCAAAGAA	1	True	NA	NA	False	AAAAAG	-9	NA	86936179	86925866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_86926327_86932221_86932320_86933394_86933543_86935987
transcript_144943.known	chr4	-	1610	5	FSM	ENSG00000163633.12	ENST00000462714.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.87367006223537	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCATGATTTATATTC	11	False	NA	NA	False	AATAAA	-23	NA	86892410	86886796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_86887894_86888120_86888276_86890047_86890139_86891455_86891594_86892281
transcript_144944.known	chr4	-	5631	10	FSM	ENSG00000145332.14	ENST00000273963.10	5631	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	7.02376916856849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTAAAAGGTCTGT	3	True	NA	-9	True	ATTAAA	-29	NA	87220618	87160102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87185250_87185800_87195323_87195691_87220417
transcript_144945.known	chr4	-	4049	9	FSM	ENSG00000145332.14	ENST00000425278.6	4049	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	13.838352503098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAAAAAAGCAGAATCAA	20	True	NA	NA	False	NA	NA	NA	87220525	87161042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87195323_87195691_87220417
transcript_144949.known	chr4	-	1782	7	FSM	ENSG00000198189.11	ENST00000358290.9	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	10.9188929027728	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGATGTGAGGCTCA	-2	True	NA	90	True	AATAAA	-30	NA	87391188	87336514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87374698_87374831_87382254_87382363_87390860
transcript_144954.nic	chr4	+	1319	8	NIC	ENSG00000170502.13	novel	2820	8	NA	NA	-5	426	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	108.62742916661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTCATCTAGT	-39	True	NA	6	True	AATAAA	-21	NA	87422567	87458344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_87422618_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_144955.known	chr4	+	2458	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	111.96355092035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTGTGAATTTTAAA	-10	True	NA	9	True	AATAAA	-17	NA	87422596	87459454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_144957.known	chr4	+	2820	8	FSM	ENSG00000170502.13	ENST00000302174.9	2820	8	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	45.460904935461	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTGTGAATTTTAAAC	-34	True	NA	10	True	AATAAA	-18	NA	87422572	87459455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87423013_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_144958.known	chr4	+	951	7	FSM	ENSG00000170502.13	ENST00000440591.6	951	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	127.562729666623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGCTTTATGCCAGTC	-1	True	NA	NA	False	NA	NA	NA	87422808	87457918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87423013_87434980_87435221_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_144962.known	chr4	+	1986	4	FSM	ENSG00000152595.17	ENST00000361056.4	1982	4	18	-22	10	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGTTGTCTGTGGTG	19	False	NA	NA	False	AATAAA	-42	NA	87832986	87846814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87833015_87834702_87834769_87838631_87838686_87844976
transcript_144963.known	chr4	+	5089	15	FSM	ENSG00000118762.8	ENST00000237596.7	5089	15	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	31.0545931401788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	-13	True	NA	16	True	AATAAA	-18	NA	88007634	88077777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232_88043458_88046641_88046871_88051990_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
transcript_144965.known	chr4	+	1561	7	FSM	ENSG00000118785.15	ENST00000395080.8	1561	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	32.401988965014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	0	True	NA	12	True	AATAAA	-23	NA	87975713	87983411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87980392_87980435_87981474_87981799_87982491
transcript_144968.known	chr4	+	1581	6	FSM	ENSG00000118785.15	ENST00000237623.11	1581	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	39.1233945357506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATTTTGGTTTCAATT	NA	False	NA	27	True	AATAAA	-38	NA	87975666	87983426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87981474_87981799_87982491
transcript_144971.known	chr4	+	1196	6	FSM	ENSG00000118785.15	ENST00000360804.4	1196	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	54.8612796059297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAACTATCACTGTAT	0	True	NA	NA	False	ACTAAA	-38	NA	87975713	87983127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980392_87980435_87981474_87981799_87982491
transcript_144975.known	chr4	-	4206	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	8.8954420288645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTATGTATTCTTT	-12	True	NA	NA	False	AATAAA	-17	NA	88158639	88090268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
transcript_144979.nic	chr4	-	2400	16	NIC	ENSG00000118777.12	novel	4206	16	NA	NA	101	-1899	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	8.41321711488668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTTTTTTGTTGTTTT	367	False	NA	-2	True	CATAAA	-29	NA	88158923	88092167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158576
transcript_144981.known	chr4	-	6309	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	9.71968220788222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCAACTGTGT	-1	True	NA	-12	True	AATAAA	-18	NA	88284561	88257619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
transcript_144986.known	chr4	-	923	6	FSM	ENSG00000163644.15	ENST00000508256.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	20.448960853794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGCAACAGTTTT	112	False	NA	NA	False	NA	NA	NA	88284631	88262576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88284405
transcript_144988.nic	chr4	-	964	4	ISM	ENSG00000163644.15	ENST00000295908.11	1940	6	-34	6879	19	0	5prime_fragment	FALSE	canonical	3	60	junction_3	11.3431330181157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGGTACTACCACC	131	False	NA	NA	False	AAGAAA	-7	NA	88284612	88268749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_88268907_88277142_88277244_88278143_88278643_88284405
transcript_144989.known	chr4	+	3776	23	FSM	ENSG00000138642.16	ENST00000264346.12	3776	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	6.62576987574131	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	1	True	NA	13	True	AATAAA	-20	NA	88378851	88443097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
transcript_144992.known	chr4	+	3511	23	FSM	ENSG00000138646.9	ENST00000264350.8	3511	23	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_14	15.0797466931835	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTCTTATTCACTA	-30	True	NA	5	True	AATAAA	-17	NA	88457118	88506163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88457535_88459346_88459471_88460094_88460172_88462134_88462357_88463531_88463624_88463854_88463986_88467058_88467205_88468345_88468423_88469156_88469261_88470613_88470674_88472408_88472503_88475840_88476031_88479352_88479508_88486114_88486229_88487068_88487180_88489165_88489337_88493011_88493156_88494164_88494332_88499925_88499993_88500914_88500986_88504231_88504416_88504494_88504598_88505672
transcript_144994.nic	chr4	+	3013	22	ISM	ENSG00000138646.9	ENST00000264350.8	3511	23	0	1573	0	-1362	5prime_fragment	FALSE	canonical	3	99	junction_14	14.177366907374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGGTAAGTATTATAT	-30	True	NA	NA	False	AAGAAA	-9	NA	88457118	88504590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_88457535_88459346_88459471_88460094_88460172_88462134_88462357_88463531_88463624_88463854_88463986_88467058_88467205_88468345_88468423_88469156_88469261_88470613_88470674_88472408_88472503_88475840_88476031_88479352_88479508_88486114_88486229_88487068_88487180_88489165_88489337_88493011_88493156_88494164_88494332_88499925_88499993_88500914_88500986_88504231_88504416_88504494
transcript_144999.nic	chr4	+	678	3	ISM	ENSG00000138646.9	ENST00000264350.8	3511	23	-109	46040	-109	-2140	5prime_fragment	FALSE	canonical	3	122	junction_1	17	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCAGATCACATGTGGA	NA	False	NA	NA	False	AAGAAA	-7	NA	88457009	88460123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_88457535_88459346_88459471_88460094
transcript_145001.nnic	chr4	-	792	3	NNC	ENSG00000145337.5	novel	1311	2	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	9431	False	NA	-20	True	AATAAA	-30	NA	88523794	88520997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_88521383_88521919_88522030_88523497
transcript_145002.known	chr4	-	1311	2	FSM	ENSG00000145337.5	ENST00000273968.5	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-13	True	NA	-20	True	AATAAA	-30	NA	88523776	88520997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88522030_88523497
transcript_145004.known	chr4	+	4914	26	FSM	ENSG00000138641.18	ENST00000402738.6	4914	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_25	4.8156411826464	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTTATTGTACTTGC	6	True	NA	10	True	AATAAA	-21	NA	88592479	88708539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88592575_88595556_88595615_88605794_88606050_88649839_88650000_88652011_88652089_88652868_88653091_88654041_88654134_88655173_88655305_88655874_88656036_88658414_88658492_88662430_88662556_88664152_88664213_88667376_88667489_88667891_88668082_88669859_88670024_88670138_88670253_88676217_88676242_88676333_88676424_88677963_88678135_88680092_88680237_88681158_88681326_88686735_88686803_88687216_88687300_88704097_88704282_88704507_88704611_88706751
transcript_145005.known	chr4	-	1917	1	FSM	ENSG00000177432.8	ENST00000323061.7	1917	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGACTCGGTACTGT	-3	True	NA	NA	False	AATAAA	-22	NA	88697829	88695912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88695900_88697800
transcript_145009.known	chr4	-	3169	18	FSM	ENSG00000138640.15	ENST00000508369.5	3169	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	8.90783256291103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACTAGCCAAACATAAAG	-15	True	NA	NA	False	GGGGCT	-11	NA	88823201	88727654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88822975
transcript_145014.known	chr4	-	2762	5	FSM	ENSG00000138640.15	ENST00000509094.5	2762	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	22.7211355350035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	9	True	NA	NA	False	AATAAA	-1	NA	89057162	88936282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_145018.known	chr4	-	1511	6	FSM	ENSG00000138640.15	ENST00000512339.5	1511	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	28.3929568731402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGATGAACATATCTTC	21	True	NA	NA	False	AATAAA	-1	NA	89057150	88855366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88856027_88906378_88906463_88938087_88938242_89020459_89020670_89029459_89029650_89056937
transcript_145019.known	chr4	+	3186	2	FSM	ENSG00000180346.5	ENST00000603357.3	3186	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAACTTCCAAATTGAAA	-2	True	NA	43	True	AATAAA	-29	NA	89111532	89114901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_89111884_89112066
transcript_145021.known	chr4	-	3177	6	FSM	ENSG00000145335.17	ENST00000394991.8	3177	6	0	0	0	0	multi-exon	TRUE	canonical	3	258	junction_4	16.2283702200806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	3	True	NA	-3	True	AATAAA	-21	NA	89837161	89724098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836961
transcript_145022.known	chr4	-	570	6	FSM	ENSG00000145335.17	ENST00000506244.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	96.3340023044823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCTCAGTTCCA	-4	True	NA	NA	False	NA	NA	NA	89837168	89726576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89837097
transcript_145023.known	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	95.1419991381304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	25	True	NA	-3	True	AATAAA	-23	NA	89837139	89726052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
transcript_145025.known	chr4	-	3041	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	96.7313806373092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-10	True	NA	-3	True	AATAAA	-21	NA	89838315	89724098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
transcript_145032.nnic	chr4	-	545	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-227	5589	at_least_one_novel_splicesite	FALSE	canonical	3	891	junction_1	46	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGCAGACATCTCCT	NA	False	NA	-13	True	ATTAAA	-16	NA	92277302	92263177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_92263356_92269242_92269357_92277049
transcript_145036.known	chr4	+	4844	14	FSM	ENSG00000152208.13	ENST00000611049.4	4844	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_13	19.104508591448	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGCTCTCATACTATT	NA	False	NA	9	True	AATAAA	-11	NA	93084985	93774553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
transcript_145045.nnic	chr4	+	2404	2	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	137473	-519894	at_least_one_novel_splicesite	FALSE	canonical	3	260	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATGAAGACAACACAGT	127	False	NA	NA	False	AGTAAA	-20	NA	92442129	92592353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_92442311_92590130
transcript_145046.nnic	chr4	+	3990	2	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	137473	-518308	at_least_one_novel_splicesite	FALSE	canonical	3	260	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATATGGGTTATTTTTAA	127	False	NA	NA	False	GATAAA	-20	NA	92442129	92593939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_92442311_92590130
transcript_145047.known	chr4	+	2212	1	FSM	ENSG00000172238.6	ENST00000306011.6	2212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTTGTCACTTATTC	0	True	NA	NA	False	AATAAA	-10	NA	93828752	93830964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_93828800_93831000
transcript_145052.known	chr4	+	5017	24	FSM	ENSG00000163104.18	ENST00000359052.8	5017	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	57.6282329463101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	-10	True	NA	15	True	AATAAA	-16	NA	94207610	94291290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_145057.known	chr4	+	4649	24	FSM	ENSG00000163104.18	ENST00000457823.6	4649	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	55.8308273756017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTAATTTTTGGAAA	142	False	NA	101	True	AATAAA	-18	NA	94207844	94290821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_145059.known	chr4	+	5094	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_18	51.1679838462341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	-12	True	NA	17	True	AATAAA	-18	NA	94207864	94291292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_145071.known	chr4	+	6043	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	31.2786535302699	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	0	True	NA	23	True	AATAAA	-23	NA	94451941	94668223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_145075.known	chr4	+	2979	13	FSM	ENSG00000163110.15	ENST00000542407.5	2979	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	65.8054265746121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGAGAGAGAAT	14	False	NA	NA	False	NA	NA	NA	94451955	94665500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575942_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_145080.nic	chr4	+	597	4	NIC	ENSG00000163110.15	novel	463	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	123.307204439427	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	153	False	NA	28	True	AATAAA	-30	NA	94451881	94549986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
transcript_145081.known	chr4	+	743	4	FSM	ENSG00000163110.15	ENST00000509333.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	32.6224190124249	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTAATAACATTTT	199	False	NA	NA	False	AATAAA	-30	NA	94451927	94573735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350
transcript_145082.known	chr4	+	1189	3	FSM	ENSG00000163110.15	ENST00000359265.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTAACGGAGTCTCCT	157	False	NA	NA	False	ATTAAA	-16	NA	94451885	94457184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94456243
transcript_145083.nic	chr4	+	923	3	ISM	ENSG00000163110.15	ENST00000509333.5	743	4	-46	49341	-4	-25592	5prime_fragment	FALSE	canonical	3	270	junction_2	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTATACAGCTTCAGAG	153	False	NA	NA	False	NA	NA	NA	94451881	94524394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_94451996_94455246_94455385_94523723
transcript_145085.known	chr4	+	463	3	FSM	ENSG00000163110.15	ENST00000511767.3	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	125.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	2	True	NA	28	True	AATAAA	-30	NA	94455266	94549986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94455385_94523723_94523876_94549793
transcript_145086.known	chr4	+	5580	13	FSM	ENSG00000138696.11	ENST00000515059.6	5580	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.12138680005467	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGTTATGTTATAGT	7	True	NA	NA	False	AATAAA	-29	NA	94757954	95158448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94758069_94875830_94875901_94996039_94996135_95104407_95104568_95114719_95114823_95115684_95115788_95123809_95123907_95124982_95125122_95129861_95130055_95131214_95131513_95148747_95148924_95152642_95152774_95154547
transcript_145091.nnic	chr4	-	1754	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCTTATTTTTCTCT	NA	False	NA	-25	True	AATAAA	-31	NA	97141397	97133335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_97134736_97139504_97139759_97141297
transcript_145094.known	chr4	+	2092	15	FSM	ENSG00000138698.15	ENST00000339360.9	2092	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	38.5360287290229	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	61	False	NA	NA	False	NA	NA	NA	98261517	98442334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_145096.known	chr4	+	1942	14	FSM	ENSG00000138698.15	ENST00000408900.7	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	43.8855423619484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	61	False	NA	NA	False	NA	NA	NA	98261517	98442334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_145098.known	chr4	+	1686	13	FSM	ENSG00000138698.15	ENST00000264572.11	1686	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.0162448898658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCCCGATACACGGCA	31	False	NA	NA	False	NA	NA	NA	98261430	98442117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_1451.known	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_16	48.6679062314469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-33	True	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_145101.known	chr4	+	875	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	54.9836339286519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTATGAGAG	46	False	NA	4	True	AGTAAA	-17	NA	98261502	98392252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
transcript_145107.known	chr4	+	941	5	FSM	ENSG00000138698.15	ENST00000511379.5	941	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	24.3977457975117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGAGTAGCTTTAAAAT	3	True	NA	NA	False	AATAAA	-36	NA	98261459	98379490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016
transcript_14511.known	chr1	-	2379	9	FSM	ENSG00000160767.22	ENST00000350210.6	2379	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	38.2352912895927	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	7472	False	NA	-16	True	AATAAA	-30	NA	155254960	155247204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155254652
transcript_145115.known	chr4	-	3242	8	FSM	ENSG00000168785.8	ENST00000508798.5	3242	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	66.2801721821073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	-2	True	NA	-5	True	AATAAA	-32	NA	98658570	98470366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478747_98482004_98482176_98486737_98486885_98507677_98507729_98658145
transcript_145116.known	chr4	-	1191	8	FSM	ENSG00000168785.8	ENST00000505184.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	69.8076073276855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTTGTCCTCA	1093	False	NA	NA	False	AAAAAG	-45	NA	98657692	98472209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98657539
transcript_145117.known	chr4	-	3347	8	FSM	ENSG00000168785.8	ENST00000305798.8	3347	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	23.9685167650893	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	-1	True	NA	-5	True	AATAAA	-32	NA	98658611	98470366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98658145
transcript_145124.nnic	chr4	-	3321	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-121	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	58.2802139094679	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	-1	True	NA	-5	True	AATAAA	-32	NA	98658732	98470366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
transcript_145126.nnic	chr4	-	1394	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	58.2802139094679	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTTGTCCTCA	137	False	NA	NA	False	AAAAAG	-45	NA	98658648	98472209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
transcript_145128.nnic	chr4	-	1343	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-121	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	58.2802139094679	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAACCAGTA	-1	True	NA	NA	False	NA	NA	NA	98658732	98472344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
transcript_145133.known	chr4	-	898	8	FSM	ENSG00000151247.13	ENST00000505992.1	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	1015.47453469412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGAGAAGTCTCATTCG	1	True	NA	NA	False	TTTAAA	-29	NA	98929133	98880897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98886453_98886547_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_145135.known	chr4	-	1132	8	FSM	ENSG00000151247.13	ENST00000504432.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	1025.48564901052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	9	True	NA	NA	False	NA	NA	NA	98929125	98880844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98909677_98909960_98929094
transcript_145137.known	chr4	-	1097	7	FSM	ENSG00000151247.13	ENST00000280892.10	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	846.036527317559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTGTAATAGTTCAG	3558	False	NA	NA	False	CATAAA	-12	NA	98929092	98880764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98928894
transcript_145138.known	chr4	-	2427	7	FSM	ENSG00000151247.13	ENST00000450253.7	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_6	341.078518167819	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCATTGTAAAATTT	1	True	NA	-4	True	AATAAA	-17	NA	98929133	98879275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_14515.nic	chr1	-	2378	8	NIC	ENSG00000160767.22	novel	3190	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	54.0290926922048	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	6927	False	NA	-16	True	AATAAA	-30	NA	155255505	155247204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155247956_155248049_155248304_155248404_155248474_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155254652
transcript_145150.known	chr4	+	2686	11	FSM	ENSG00000164024.12	ENST00000296411.11	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_9	39.9854973709219	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	-10	True	NA	27	True	ATTAAA	-21	NA	98995720	99062809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
transcript_145155.known	chr4	-	2652	9	FSM	ENSG00000197894.12	ENST00000296412.14	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_8	205.407521770747	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGGTGGTGGTAAGT	NA	False	NA	16	True	AATAAA	-22	NA	99088788	99070977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99072442_99072572_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_145163.known	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_5	244.553797762374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	9	True	NA	NA	False	NA	NA	NA	99088717	99075224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_145167.known	chr4	-	1475	7	FSM	ENSG00000197894.12	ENST00000512621.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	96.7585769956453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAACATAATAAAAGTAA	3510	False	NA	-61	True	CATAAA	-25	NA	99085216	99072185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114
transcript_145168.known	chr4	-	3516	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.99591753402052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTGCTGAAATACAGA	-12	True	NA	NA	False	AATAAA	-42	NA	99564017	99546708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
transcript_145169.known	chr4	-	3547	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	12.0559918204812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTCTGCTGAAATACA	-4	True	NA	NA	False	AATAAA	-40	NA	99564039	99546710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
transcript_145170.known	chr4	-	4163	7	FSM	ENSG00000109270.13	ENST00000499666.7	4163	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_5	28.3117564901148	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTGGACATATGTGTAT	-11	True	NA	NA	False	AAGAAA	-31	NA	99894427	99878335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_145172.known	chr4	-	961	6	FSM	ENSG00000109270.13	ENST00000515100.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	135.90790999791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTTTCCTTTGTACAT	-12	True	NA	-8	True	AATAAA	-13	NA	99894428	99881492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99894334
transcript_145173.known	chr4	-	1220	7	FSM	ENSG00000109270.13	ENST00000226522.8	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	135.668714153264	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGAGCACTGTATAGG	40	True	NA	-43	True	AATAAA	-19	NA	99894376	99881206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885655_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_145174.known	chr4	-	5967	8	FSM	ENSG00000164031.17	ENST00000442697.7	5967	8	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_5	14.0900891496434	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTTATCATGTTT	3919	False	99946632	4	True	AATAAA	-23	NA	99946618	99896247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
transcript_145179.known	chr4	-	868	5	FSM	ENSG00000164032.12	ENST00000651623.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	1	129	junction_1	5302.10656249004	5396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-7	True	NA	-35	True	AATAAA	-15	NA	99950280	99948087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99948524_99948813_99948941_99949272_99949387_99949662_99949741_99950167
transcript_145185.known	chr4	-	1843	2	FSM	ENSG00000164032.12	ENST00000511348.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	11803	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGTATTAAATTTGCT	-1	True	NA	-33	True	AATAAA	-17	NA	99950355	99948085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99949741_99950167
transcript_145186.known	chr4	-	2604	3	FSM	ENSG00000145358.6	ENST00000273990.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTCTTTTTTT	-2	True	NA	-3	True	AATAAA	-18	NA	100190468	100185869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_100188168_100189892_100190033_100190302
transcript_145188.known	chr4	-	4743	14	FSM	ENSG00000138814.17	ENST00000394854.8	4743	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	18.6636373986087	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGCTTGGTCTTTCTGA	-23	True	NA	1	True	AATAAA	-32	NA	101347526	101023417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_101026062_101029165_101029196_101032266_101032365_101040481_101040567_101061086_101061162_101063231_101063358_101080531_101080627_101083185_101083264_101093775_101093916_101098366_101098513_101099610_101099723_101108953_101109079_101195915_101196117_101346738
transcript_145191.known	chr4	+	790	2	FSM	ENSG00000254531.2	ENST00000527564.2	822	2	28	4	4	0	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGTTTTATTTCCA	10	True	NA	15	True	AATAAA	-15	NA	101347779	101348883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_101348010_101348323
transcript_145192.known	chr4	+	3322	17	FSM	ENSG00000153064.12	ENST00000322953.9	3322	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.11301768804712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGTATTGGCCAATAAA	0	True	NA	NA	False	AATAAA	-31	NA	101790729	102074812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_101790951_101829807_101830207_101855034_101855190_101862525_101862665_101870504_101870645_101895304_101895411_101917992_101918190_102021513_102021593_102025200_102025510_102029959_102030266_102043838_102043908_102060210_102060390_102063074_102063139_102071274_102071305_102072344_102072401_102073683_102073749_102074004
transcript_145194.known	chr4	+	3044	16	FSM	ENSG00000153064.12	ENST00000428908.5	3044	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.13541565040626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGAGTATTGGCCAATA	NA	False	NA	NA	False	AATAAA	-29	NA	101790606	102074810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_101790951_101855034_101855190_101862525_101862665_101870504_101870645_101895304_101895411_101917992_101918190_102021513_102021593_102025200_102025510_102029959_102030266_102043838_102043908_102060210_102060390_102063074_102063139_102071274_102071305_102072344_102072401_102073683_102073749_102074004
transcript_145198.known	chr4	-	3053	9	FSM	ENSG00000138821.14	ENST00000683412.1	3053	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	100.701290954982	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAACCATGTATTGTG	1	True	NA	-13	True	ATTAAA	-31	NA	102345205	102261676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345155
transcript_145199.known	chr4	-	3152	9	FSM	ENSG00000138821.14	ENST00000356736.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	74.0049618268937	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	-3	True	NA	-2	True	ATTAAA	-42	NA	102345482	102261665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345344
transcript_1452.known	chr1	-	2419	20	FSM	ENSG00000008128.23	ENST00000358779.9	2419	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	48.4825696182319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	0	True	NA	NA	False	NA	NA	NA	1724324	1702880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_14520.known	chr1	-	1499	5	FSM	ENSG00000160767.22	ENST00000487649.5	1499	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	61.5243854093643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACGTGTGCCTATGCAA	7241	False	NA	NA	False	NA	NA	NA	155255191	155247426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155253624_155253733_155254652
transcript_145207.known	chr4	-	3238	8	FSM	ENSG00000138821.14	ENST00000394833.6	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	34.3546925173139	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	340	False	NA	-2	True	ATTAAA	-42	NA	102345139	102261665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
transcript_145208.known	chr4	-	608	2	FSM	ENSG00000248161.5	ENST00000505709.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431282	102418601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102418989_102431061
transcript_14521.known	chr1	-	2103	5	FSM	ENSG00000160767.22	ENST00000481822.1	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	5.31507290636732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	NA	NA	NA	155255483	155252748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
transcript_145210.known	chr4	-	4001	17	FSM	ENSG00000109323.11	ENST00000647097.2	4001	17	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_15	18.3982633351629	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCTCAAGGGCTGGG	26	False	102760981	NA	False	AATAAA	-7	NA	102760968	102630769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
transcript_145212.known	chr4	-	582	2	FSM	ENSG00000109323.11	ENST00000507358.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGCTGTGTATGTTG	0	True	NA	NA	False	AATGAA	-20	NA	102760994	102753690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102753996_102760717
transcript_145220.known	chr4	-	3729	8	FSM	ENSG00000109332.20	ENST00000453744.7	3729	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1198.44547269386	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	1	True	NA	-1	True	ATTAAA	-18	NA	102827551	102794382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_145221.known	chr4	-	2368	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1498.1571400646	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	235	False	NA	-23	True	AATAAA	-17	NA	102827948	102795975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
transcript_145222.known	chr4	-	2227	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1399.8698627562	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	6	True	NA	-23	True	AATAAA	-17	NA	102828159	102795975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
transcript_145223.known	chr4	-	896	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1484.59358830927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGTTCTTCCAGCTT	17	True	NA	87	True	NA	NA	NA	102868875	102797251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
transcript_145229.known	chr4	-	838	8	FSM	ENSG00000109332.20	ENST00000349311.12	838	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1481.7266954469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	-43	True	NA	75	True	NA	NA	NA	102827849	102797263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827734
transcript_145232.known	chr4	-	1087	8	FSM	ENSG00000109332.20	ENST00000321805.11	1087	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1495.47454757645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGACAATAACTGCTTT	-1	True	NA	NA	False	NA	NA	NA	102827553	102797234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827426
transcript_145234.known	chr4	-	577	8	FSM	ENSG00000109332.20	ENST00000507845.5	577	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1647.14062693443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTGGAATAAACTTTAA	-7	True	NA	-46	True	NA	NA	NA	102825785	102797384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825737
transcript_145242.known	chr4	-	574	8	FSM	ENSG00000109332.20	ENST00000502404.5	574	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1645.49428092942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	-2	True	NA	-60	True	NA	NA	NA	102825780	102797398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825721
transcript_145265.known	chr4	-	660	7	FSM	ENSG00000109332.20	ENST00000357194.10	660	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1573.05664940021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTGATTTTCTTAT	-4	True	NA	-18	True	AATAAA	-15	NA	102868896	102797356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102868714
transcript_145266.known	chr4	-	1977	7	FSM	ENSG00000109332.20	ENST00000503742.5	1977	7	0	0	0	0	multi-exon	FALSE	canonical	3	1790	junction_6	598.352738775382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCATGTGTATTATGTG	617	False	NA	NA	False	TTTAAA	-9	NA	102827566	102797150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_145277.known	chr4	-	1184	9	FSM	ENSG00000164037.17	ENST00000504216.5	1184	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.48746859276655	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATGAATTATTTCAC	14	True	NA	12	True	ATTAAA	-29	NA	103019666	102901087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102901333_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102912007_102912130_102932123_102932300_102991642_102991713_103019598
transcript_145280.known	chr4	+	5878	3	FSM	ENSG00000145354.12	ENST00000273986.10	5878	3	0	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_2	47.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATTTCCTGTAATT	-5	True	NA	NA	False	AATAAA	-19	NA	102868991	102892807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_102869188_102885215_102885431_102887340
transcript_145285.known	chr4	-	2300	13	FSM	ENSG00000164038.16	ENST00000362026.7	2300	13	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	7.34232403413403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAGACGTCGAAAGGAA	32	True	NA	NA	False	NA	NA	NA	103076303	103019867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103020390_103026367_103026592_103028746_103028884_103031699_103031809_103043295_103043446_103044889_103044997_103047050_103047227_103048892_103049021_103050239_103050383_103057800_103057972_103066326_103066508_103067460_103067593_103076183
transcript_145288.known	chr4	-	6351	12	FSM	ENSG00000164038.16	ENST00000394785.9	6351	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	6.06166657387987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTTGTTTTAAAATCC	-17	True	NA	NA	False	AATAAA	-22	NA	103076761	103022252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103026592_103028746_103028884_103031699_103031809_103043295_103043446_103044889_103044997_103047050_103047227_103048892_103049021_103050239_103050383_103057800_103057972_103066326_103066508_103067460_103067593_103076183
transcript_145295.nic	chr4	-	1230	11	NIC	ENSG00000164039.15	novel	2920	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	140.140964746215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-2	True	NA	-8	True	AATAAA	-15	NA	103099870	103079476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_145296.known	chr4	-	1911	10	FSM	ENSG00000164038.16	ENST00000503103.5	1911	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.47511360236793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTGTTAAACATCATA	3	True	NA	NA	False	NA	NA	NA	103076332	103025955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103026592_103031699_103031809_103043295_103043446_103044889_103044997_103047050_103047227_103048892_103049021_103050239_103050383_103066326_103066508_103067460_103067593_103076183
transcript_145297.known	chr4	-	2920	10	FSM	ENSG00000164039.15	ENST00000296424.9	2920	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_9	38.5403428201068	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGATCTGAGTTAGTCT	-9	True	NA	NA	False	AATAAA	-38	NA	103099834	103077591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_145301.known	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_8	39.2515923243886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-3	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_145303.known	chr4	-	824	4	FSM	ENSG00000164038.16	ENST00000505838.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.46337971105226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCACATAGCTGTC	-1	True	NA	NA	False	NA	NA	NA	103076336	103065410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103065769_103066326_103066508_103067460_103067593_103076183
transcript_145305.known	chr4	-	8260	53	NNC	ENSG00000138778.14	novel	8541	49	NA	NA	36	-236	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	34.3888957927723	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGATAGCAATACCTT	-17	True	NA	-70	True	AATGAA	-19	NA	103198409	103106046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136172_103136279_103136360_103138350_103138450_103139788_103139942_103139942_103139952_103139952_103139962_103139962_103140080_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_145307.nic	chr4	-	1659	16	ISM	ENSG00000138778.14	ENST00000265148.9	8541	49	-65	69002	37	2227	5prime_fragment	FALSE	canonical	3	34	junction_8	6.38609600790829	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATTAAAAGAA	-16	True	NA	NA	False	AAAAAG	-7	NA	103198408	103174812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_14531.nnic	chr1	-	1467	9	NNC	ENSG00000116521.11	novel	1545	9	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_5	190.969238360528	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	108	False	NA	-3	True	AATAAA	-23	NA	155262324	155255980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258913_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_145310.known	chr4	+	1257	3	FSM	ENSG00000248740.7	ENST00000656681.1	1257	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTGAAGGTTTGTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	103255825	103454275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_103256295_103436934_103437047_103453599
transcript_145312.known	chr4	-	5359	5	FSM	ENSG00000169836.5	ENST00000304883.3	5359	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	5.40254569624358	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTTACTACTTTCCTA	-2	True	NA	NA	False	ATTAAA	-20	NA	103719985	103586030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103589995_103591486_103591684_103656193_103656345_103658214_103658404_103719127
transcript_145313.nic	chr4	+	2756	3	ISM	ENSG00000168769.14	ENST00000265149.9	9588	10	-129	43620	-129	1911	5prime_fragment	FALSE	canonical	3	3	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTACAAATAAAGAATAAAGA	-19	True	NA	NA	False	NA	NA	NA	105146656	105236183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_105146980_105190359_105190506_105233896
transcript_145315.known	chr4	-	1177	13	FSM	ENSG00000138777.20	ENST00000509031.5	1177	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	240.951066954821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-3	True	NA	-1	True	AATAAA	-21	NA	105474014	105369560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456247_105456292_105456680_105456746_105473893
transcript_145318.known	chr4	-	1665	12	FSM	ENSG00000138777.20	ENST00000341695.10	1665	12	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_6	51.2240258711308	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTTACTTTCATTT	3	True	NA	-16	True	AATAAA	-18	NA	105474062	105369076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_145319.nic	chr4	-	1109	11	NIC	ENSG00000138777.20	novel	1665	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	183.975786450283	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	6	True	NA	-5	True	AATAAA	-17	NA	105474059	105369564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105473893
transcript_145321.known	chr4	-	1414	11	FSM	ENSG00000138777.20	ENST00000348706.9	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	172.855691257187	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	1	True	NA	NA	False	NA	NA	NA	105474064	105369242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_145323.known	chr4	-	1072	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	199.232415925611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-2	True	NA	-5	True	AATAAA	-17	NA	105474067	105369564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
transcript_145328.known	chr4	-	859	8	FSM	ENSG00000138777.20	ENST00000432483.6	859	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	234.084669837777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	15	True	NA	-5	True	AATAAA	-17	NA	105474050	105369564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105456680_105456746_105473893
transcript_14533.known	chr1	-	1545	9	FSM	ENSG00000116521.11	ENST00000302631.8	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_7	60.3053428395859	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-3	True	NA	-3	True	AATAAA	-23	NA	155262360	155255980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_145330.known	chr4	-	667	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_5	259.885821083029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	15	True	NA	-5	True	AATAAA	-17	NA	105474050	105369564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
transcript_145331.known	chr4	-	631	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_3	47.4150556258242	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCTATACTCAAGTT	6	True	NA	-1	True	AATAAA	-18	NA	105474059	105446201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_145334.known	chr4	-	1718	8	FSM	ENSG00000138785.16	ENST00000340139.10	1718	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	57.3378814838953	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	-12	True	NA	0	True	AATAAA	-17	NA	105708689	105682626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105703647_105703810_105708637
transcript_145335.known	chr4	+	4304	12	FSM	ENSG00000138780.15	ENST00000515279.6	4304	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	13.3094138063165	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	-15	True	NA	9	True	AATAAA	-21	NA	105708783	105847725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823070_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
transcript_145339.known	chr4	+	2228	6	FSM	ENSG00000138780.15	ENST00000484843.1	2228	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	13.5292276202302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	-12	True	NA	NA	False	TTTAAA	-3	NA	105708786	105823690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953
transcript_145341.known	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	268.212830507751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	4	True	NA	-39	True	AATAAA	-12	NA	106316549	106347704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_145344.known	chr4	+	2412	7	FSM	ENSG00000164022.18	ENST00000358008.7	2412	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	227.412254140654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGACTGATATTTTGC	-9	True	NA	90	True	AATAAA	-17	NA	106315695	106348491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316345_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_145345.known	chr4	+	2773	7	FSM	ENSG00000164022.18	ENST00000672341.1	2773	7	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	43.5418062198721	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGCATCATCAGTAG	4	True	NA	NA	False	AATAAA	-28	NA	106316549	106349456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_145350.known	chr4	+	568	5	FSM	ENSG00000164022.18	ENST00000510207.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	259.567428619232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCCGTCTGGATCT	0	True	NA	NA	False	AAAACA	-38	NA	106315543	106331730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106315637_106324984_106325119_106327450_106327565_106328075_106328244_106331671
transcript_145352.nic	chr4	+	495	4	ISM	ENSG00000164022.18	ENST00000684504.1	1101	7	-32	19540	-19	-3499	5prime_fragment	FALSE	canonical	3	500	junction_1	51.279192227994	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGAAAGGTATTTTT	-12	True	NA	NA	False	GATAAA	-39	NA	106316503	106328231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075
transcript_145353.known	chr4	+	2710	7	FSM	ENSG00000164022.18	ENST00000673123.1	2710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	228.901482932918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTCATTCTTTTGGG	9	True	NA	-28	True	AATGAA	-24	NA	106316554	106349183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316810_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_145354.known	chr4	+	1101	7	FSM	ENSG00000164022.18	ENST00000684504.1	1101	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	222.920763202234	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGGCTCATTTTTGC	-10	True	NA	28	True	AATAAA	-31	NA	106316535	106347771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337042_106347530
transcript_14536.known	chr1	-	1537	8	FSM	ENSG00000116521.11	ENST00000355379.3	1537	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	178.035080239593	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	2	False	NA	-3	True	AATAAA	-23	NA	155262430	155255980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155262085
transcript_145361.known	chr4	-	2513	12	FSM	ENSG00000138801.9	ENST00000265174.5	2513	12	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_6	44.6034872446109	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGATCTATTTTATA	-2	True	NA	-8	True	AATAAA	-21	NA	107720234	107613665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_107614388_107631630_107631861_107644801_107645071_107653490_107653627_107654694_107654901_107656895_107657008_107659958_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_145374.known	chr4	+	4768	5	FSM	ENSG00000155016.18	ENST00000332884.11	4768	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7.58287544405155	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTCATGTCTGTTTT	-20	True	NA	5	True	ATTAAA	-14	NA	107931548	107953461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107932134_107944969_107945606_107947375_107947538_107949349_107949518_107950244
transcript_145383.known	chr4	+	1752	9	FSM	ENSG00000138796.18	ENST00000403312.6	1752	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	148.70939571863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAATACACTCAAATGA	1	True	NA	-29	True	TATAAA	-1	NA	107989895	108035118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108028860_108028870_108033175_108033293_108034238
transcript_145384.known	chr4	+	1895	9	FSM	ENSG00000138796.18	ENST00000640060.1	1895	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	142.572788427526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCACTGTTGCAAAT	7	True	NA	-36	True	NA	NA	NA	107989901	108035022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108004663_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_145385.known	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	21.3331207472401	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	-6	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_145388.known	chr4	+	1327	7	FSM	ENSG00000138796.18	ENST00000639335.1	1327	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	129.725886219966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATAGTCTGTGAAGC	-18	True	NA	NA	False	NA	NA	NA	107989828	108034762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_145389.known	chr4	+	1284	4	FSM	ENSG00000138796.18	ENST00000682197.1	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	22.4251842554055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCAGGGGTTTTGGTGC	2	True	NA	NA	False	AATAAA	-4	NA	107989848	108020320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539
transcript_145392.known	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_5	10818.5164713097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	25	False	NA	30	True	TATAAA	-25	NA	108620655	108630412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
transcript_145394.known	chr4	+	549	6	FSM	ENSG00000109475.17	ENST00000506397.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11445.965287384	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTATGACTTTTTTTT	2	True	NA	13	True	AATAAA	-40	NA	108620632	108625252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620713_108621630_108621697_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_145395.known	chr4	+	546	5	FSM	ENSG00000109475.17	ENST00000394667.8	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	12362	junction_1	5106.08707818423	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTGGTTTGG	1	True	NA	131	True	NA	NA	NA	108620575	108625370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_145396.known	chr4	+	529	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	2142	junction_1	9300.97281202348	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	-5	True	NA	16	True	AATAAA	-43	NA	108620589	108625255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_14540.nnic	chr1	-	1352	7	NIC	ENSG00000116521.11	novel	1537	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_6	207.922862299139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	64	False	NA	-3	True	AATAAA	-23	NA	155262368	155255980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155262085
transcript_145402.known	chr4	+	1062	4	FSM	ENSG00000198856.13	ENST00000361564.9	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	2708	junction_3	102.795373869104	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTATATTTGTTTTT	-15	True	NA	29	True	AATAAA	-17	NA	108650598	108667820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108667246
transcript_145405.known	chr4	+	876	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTTATATTTGTTT	NA	False	NA	27	True	AATAAA	-15	NA	108650584	108667818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108650795_108655563_108655658_108667246
transcript_145408.known	chr4	-	2086	13	FSM	ENSG00000164089.9	ENST00000296486.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.50792752997486	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAAAAATTACTAG	-2	True	NA	NA	False	AATAAA	-14	NA	108763053	108742052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762842
transcript_145414.known	chr4	+	1951	3	FSM	ENSG00000246774.1	ENST00000500526.1	1951	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAATCCCCTAAAA	NA	False	NA	NA	False	NA	NA	NA	109303034	109316135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109303328_109313342_109313442_109314576
transcript_145416.known	chr4	+	5083	24	FSM	ENSG00000138802.11	ENST00000265175.5	5083	24	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	29.8473748342975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATATATATGAATCAATA	-25	True	NA	NA	False	NA	NA	NA	109433814	109540896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
transcript_145418.known	chr4	+	3780	23	FSM	ENSG00000138802.11	ENST00000399100.6	3780	23	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	21.5103280978239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCTATAACCTAGG	-27	True	NA	NA	False	AATAAA	-11	NA	109433812	109539696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
transcript_145424.known	chr4	-	957	3	FSM	ENSG00000247950.8	ENST00000499359.2	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCACTTATGTTGATG	NA	False	NA	NA	False	AATAAA	-24	NA	109433817	109429962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109430781_109431691_109431747_109433733
transcript_145430.known	chr4	+	2230	8	FSM	ENSG00000005059.16	ENST00000394650.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	35.7850727059682	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATACAAGTTAAATCAG	-15	True	NA	-59	True	AATAAA	-18	NA	109560245	109688719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109560437_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
transcript_145432.known	chr4	+	453	3	FSM	ENSG00000005059.16	ENST00000515114.3	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCATCTTCACAGCAGG	9	True	NA	NA	False	AATGAA	-19	NA	109560211	109660346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109560437_109659010_109659087_109660194
transcript_145435.nnic	chr4	-	1700	7	NNC	ENSG00000138794.10	novel	1634	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	110.647714240587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTACATTTTTCTA	-13	True	NA	-26	True	AATAAA	-15	NA	109703443	109688627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703287
transcript_145436.known	chr4	-	1634	7	FSM	ENSG00000138794.10	ENST00000265164.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	10.3869576339219	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTACATTTTTCTA	-15	True	NA	-26	True	AATAAA	-15	NA	109703445	109688627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703355
transcript_145449.known	chr4	-	1347	4	FSM	ENSG00000138794.10	ENST00000352981.7	1347	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	139.905523677786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTTTCTAACTCAC	11	True	NA	-20	True	AATAAA	-21	NA	109703419	109688621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109703355
transcript_145455.known	chr4	-	1189	4	FSM	ENSG00000123739.11	ENST00000502283.1	1189	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	228.527168333804	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGGACTTTTTTTTTCT	-4	True	NA	-16	True	AATACA	-16	NA	109729974	109713916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109714496_109717547_109717714_109718688_109718760_109729601
transcript_145462.known	chr4	-	755	3	FSM	ENSG00000123739.11	ENST00000507961.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAATTTATATCTTG	14	True	NA	10	True	CATAAA	-37	NA	109729956	109714261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109714496_109717547_109717714_109729601
transcript_145468.known	chr4	-	364	1	FSM	ENSG00000272795.1	ENST00000609440.1	364	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGTGTGTGTAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	109815410	109815046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109815000_109815400
transcript_145469.known	chr4	+	1011	7	FSM	ENSG00000109534.17	ENST00000394631.7	1011	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	155.259728627012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGAGTGTGTTTATTAA	-11	True	NA	21	True	AATAAA	-21	NA	109815509	109824740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109815546_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_145471.known	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	64.5327221045434	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	-1	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_145472.nic	chr4	+	1184	7	NIC	ENSG00000109534.17	novel	1015	7	NA	NA	32	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_1	141.171290754648	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	-2	True	NA	18	True	AATAAA	-18	NA	109815793	109824737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_109816006_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_145479.nic	chr4	+	628	3	ISM	ENSG00000109534.17	ENST00000506840.5	831	5	-118	4517	7	-1538	5prime_fragment	FALSE	canonical	3	262	junction_1	73.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAAGTGGATGAAATA	-4	True	NA	NA	False	AAAACA	-10	NA	109815516	109818049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_109815805_109816152_109816379_109817935
transcript_145481.known	chr4	+	3661	4	FSM	ENSG00000183423.12	ENST00000594814.6	3661	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTGTCTAAGACTCATC	-1	True	NA	NA	False	AATAAA	-15	NA	109848106	109872315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109848318_109851503_109851977_109867640_109867947_109869644
transcript_145482.known	chr4	+	6388	24	FSM	ENSG00000138798.13	ENST00000265171.10	6388	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.88686898063078	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTTTGAAACCATATGAT	-2	True	NA	NA	False	AATAAA	-17	NA	109912882	110013766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109913463_109940945_109941146_109943253_109943436_109943841_109944070_109945072_109945276_109959311_109959438_109960866_109960990_109961862_109961986_109963172_109963299_109964400_109964538_109968970_109969120_109974702_109974808_109976011_109976236_109979971_109980140_109980825_109980976_109983421_109983542_109987743_109987861_109988583_109988710_109993246_109993370_109994732_109994881_109999678_109999847_110004504_110004623_110008151_110008231_110011201
transcript_145486.known	chr4	-	6454	5	FSM	ENSG00000170522.10	ENST00000394607.7	6454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	124.8466559424	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-1	True	NA	0	True	AATAAA	-27	NA	110198653	110045845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198521
transcript_145487.known	chr4	-	610	5	FSM	ENSG00000170522.10	ENST00000506625.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	122.727340067322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCCTGCACTGGTATC	-16	True	NA	NA	False	NA	NA	NA	110199009	110051725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198841
transcript_145490.known	chr4	-	6570	4	FSM	ENSG00000170522.10	ENST00000302274.8	6570	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	29.227080289044	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-15	True	NA	0	True	AATAAA	-27	NA	110198615	110045845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246
transcript_145493.nic	chr4	-	673	3	NIC	ENSG00000170522.10	novel	204	2	NA	NA	-12	324	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGGAGCCACGCCATT	526	False	NA	-12	True	AATAAA	-14	NA	110198665	110197566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_110197975_110198246_110198368_110198521
transcript_145496.known	chr4	+	6861	20	FSM	ENSG00000138792.10	ENST00000265162.10	6861	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.25628965878488	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATACATTCATTTATGT	-1	True	NA	NA	False	AATAAA	-37	NA	110476154	110565285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_110477059_110488540_110488683_110491032_110491165_110506636_110506758_110509652_110509808_110510244_110510359_110513414_110513550_110515376_110515443_110520007_110520074_110520214_110520367_110531197_110531278_110542750_110542888_110543014_110543071_110548175_110548327_110549345_110549420_110549527_110549633_110549715_110549887_110553314_110553456_110559646_110559726_110561405
transcript_145503.known	chr4	-	448	2	FSM	ENSG00000250103.3	ENST00000513690.3	602	2	145	9	-43	-9	multi-exon	FALSE	canonical	3	64	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	7648	False	NA	-14	True	AATAAA	-19	NA	110615458	110595512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110595809_110615306
transcript_145504.known	chr4	-	1897	5	FSM	ENSG00000164093.18	ENST00000394595.8	1897	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.4013220313574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-1	True	NA	-9	True	AGTAAA	-17	NA	110637011	110617422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110618689_110621163_110621370_110632342_110632481_110632952_110633009_110636780
transcript_145505.known	chr4	-	2100	4	FSM	ENSG00000164093.18	ENST00000355080.9	2100	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.1434160364686	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	4827	False	NA	-9	True	AGTAAA	-17	NA	110637352	110617422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110618689_110621163_110621370_110632952_110633009_110636780
transcript_145506.known	chr4	-	2294	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-4	True	NA	-9	True	AGTAAA	-17	NA	110623077	110617422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110618689_110621163_110621370_110622255
transcript_145507.nnic	chr4	+	3901	2	Genic_Genomic	ENSG00000289096.1	novel	797	1	NA	NA	-2	3253	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTCTCTGTGATGCTT	-1	True	NA	12	True	AATAAA	-14	NA	110619746	110623798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr4_+_110623456_110623606
transcript_145509.nnic	chr4	-	1761	2	NNC	ENSG00000164093.18	novel	1608	3	NA	NA	934	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	3324	False	NA	-9	True	AGTAAA	-17	NA	110619782	110617422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_110618689_110619287
transcript_145510.known	chr4	-	1398	1	FSM	ENSG00000164093.18	ENST00000607868.1	1398	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATTGGTCTGGATTCT	4280	False	NA	-15	True	AGTAAA	-11	NA	110618826	110617428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110617400_110618800
transcript_145511.known	chr4	+	8844	2	FSM	ENSG00000174749.6	ENST00000309733.6	8844	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTTCTGAGTGTCTC	-2	True	NA	NA	False	AATAAA	-17	NA	112145453	112195256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112145734_112186692
transcript_145514.known	chr4	-	2036	1	FSM	ENSG00000260526.1	ENST00000562919.1	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACAGTAATTATTTCA	557	False	NA	NA	False	AATAAA	-23	NA	112231596	112229560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112229600_112231600
transcript_145515.known	chr4	+	5915	10	FSM	ENSG00000138660.12	ENST00000274000.10	5915	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_7	8.96632933414756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCATCTGATTCTTGA	-1	True	NA	NA	False	AATAAA	-18	NA	112231786	112273110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_145519.known	chr4	+	2337	9	FSM	ENSG00000138660.12	ENST00000309703.10	2337	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	123.300192619476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGGCCCTTTCAATAT	8	False	NA	NA	False	TATAAA	-39	NA	112231832	112269677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_145521.known	chr4	-	4163	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTTGTTATTATTTTA	2	True	NA	0	True	NA	NA	NA	112285904	112274536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112278435_112285639
transcript_145522.known	chr4	-	6648	28	FSM	ENSG00000138658.16	ENST00000505019.6	6648	28	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_18	29.0107590845393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTTCTGTTTGCCAA	485	False	112636928	-5	True	AATAAA	-21	NA	112636909	112539338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279_112587930_112589723_112589875_112603523_112603698_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636850
transcript_145528.known	chr4	-	794	6	FSM	ENSG00000138658.16	ENST00000503172.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	16.2480768092719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGAACATTGTGACTT	-11	True	NA	NA	False	AATATA	-9	NA	112636898	112619517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
transcript_145530.known	chr4	-	3583	10	FSM	ENSG00000138658.16	ENST00000264370.9	3583	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.4544991446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATGGGTTTTGTAA	9974	False	NA	NA	False	NA	NA	NA	112636995	112605559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112606092_112607815_112607938_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636850
transcript_145531.known	chr4	+	2020	13	FSM	ENSG00000174720.17	ENST00000509622.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	166.321705505392	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-32	True	NA	9	True	AATAAA	-17	NA	112637126	112657586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637240_112644667_112644769_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_145532.known	chr4	+	2107	13	FSM	ENSG00000174720.17	ENST00000344442.10	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	158.087792065042	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-16	True	NA	9	True	AATAAA	-17	NA	112637142	112657586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_145539.known	chr4	+	2164	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	164.019540671904	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGATTTTGTTTTT	297	False	NA	15	True	AATAAA	-23	NA	112637455	112657592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_145544.known	chr4	+	1047	7	FSM	ENSG00000174720.17	ENST00000505034.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	185.192692440424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATGCAGAATCCCT	297	False	NA	NA	False	NA	NA	NA	112637455	112647449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198
transcript_14555.known	chr1	-	2120	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	95.5133789348673	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	-4	True	NA	-8	True	AATAAA	-19	NA	155273482	155262873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
transcript_145562.known	chr4	-	345	3	FSM	ENSG00000249532.6	ENST00000509938.2	389	3	41	3	0	2	multi-exon	FALSE	canonical	3	18107	junction_2	4356	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	2	True	NA	-16	True	AATAAA	-15	NA	112648699	112646722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112646969_112647414_112647468_112648653
transcript_145569.known	chr4	-	294	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	5	-3	0	multi-exon	FALSE	canonical	3	15732	junction_1	0	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTGTTTCTGTGCCAG	-2	True	NA	-18	True	AATAAA	-13	NA	112648703	112646724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112646969_112648653
transcript_14557.known	chr1	-	2154	13	FSM	ENSG00000176444.19	ENST00000368361.9	2154	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_10	57.1328860348107	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	22	False	155273526	-2	True	AATAAA	-25	NA	155273504	155262867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269717_155270807_155270978_155273200
transcript_145572.known	chr4	-	740	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAATATATTTTATATA	43	False	NA	-49	True	TTTAAA	-8	NA	112706810	112693046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112693686_112706709
transcript_145574.known	chr4	+	5956	25	FSM	ENSG00000145362.21	ENST00000673353.1	5956	25	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1857697726058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATGTGGCAACGGTG	48	False	NA	9	True	AATAAA	-10	NA	113292924	113383725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_113293300_113293439_113293539_113302766_113302840_113311254_113311400_113317706_113317810_113318516_113318621_113330245_113330471_113333053_113333209_113335845_113336058_113336576_113336782_113339225_113339323_113341687_113341917_113343016_113343143_113345899_113346023_113348275_113348309_113350227_113350250_113360822_113360898_113363337_113363470_113365038_113365183_113367565_113367852_113369513_113369806_113373089_113373174_113373284_113373450_113374763_113374947_113381456
transcript_145575.known	chr4	+	3607	23	FSM	ENSG00000145362.21	ENST00000682211.1	3607	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.7695800843412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTATGAGAAGATA	38	False	NA	NA	False	TATAAA	-10	NA	113049521	113303691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_113049813_113174415_113174518_113196367_113196467_113199010_113199110_113232160_113232260_113236986_113237173_113237598_113237623_113240484_113240584_113242110_113242210_113249763_113249863_113255734_113255933_113258049_113258149_113258312_113258412_113264896_113264996_113274451_113274650_113277836_113277936_113278459_113278559_113282674_113282873_113287604_113287704_113288387_113288487_113292415_113292515_113293439_113293539_113302766
transcript_145579.known	chr4	-	348	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2075	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	21	False	NA	NA	False	NA	NA	NA	113214393	113214045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113214000_113214400
transcript_145580.known	chr4	-	5294	18	FSM	ENSG00000145349.18	ENST00000394524.7	5294	18	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15.6488278522319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCATGGCTCTGTGGTC	1	True	NA	-6	True	AATAAA	-21	NA	113761445	113451031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113454516_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_145583.known	chr4	-	1642	17	FSM	ENSG00000145349.18	ENST00000379773.6	1642	17	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	12.8640730330638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTCTCTGGAAAGATC	1489	False	NA	-20	True	AATAAA	-20	NA	113761130	113457187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_145586.known	chr4	-	860	3	FSM	ENSG00000145349.18	ENST00000509907.1	860	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	60.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCATTACTGCTCTTC	1203	False	NA	NA	False	ATTAAA	-25	NA	113761416	113754738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113755091_113759319_113759415_113761003
transcript_145588.known	chr4	-	4603	2	FSM	ENSG00000180801.14	ENST00000315366.8	4603	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCCTGGTGGCACAT	2	True	NA	-6	True	AATAAA	-18	NA	113979647	113900283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113903676_113978436
transcript_145590.known	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	23.1257432312996	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	24	True	NA	NA	False	AATAAA	-17	NA	114598806	114678225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_145597.known	chr4	-	2023	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAACTTAGTCTTTTTT	-13	True	NA	NA	False	ATTAAA	-18	NA	117085576	117083553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_117083600_117085600
transcript_145598.known	chr4	+	2184	2	FSM	ENSG00000164100.9	ENST00000394488.2	2184	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATCTACATTTGTCTT	245	False	NA	NA	False	ATTAAA	-15	NA	118033617	118055645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118033912_118053755
transcript_145600.known	chr4	-	4809	13	FSM	ENSG00000164099.3	ENST00000296498.3	4809	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	6.88547182277455	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCCTTAAATTTTTGT	12	True	NA	-1	True	AATAAA	-22	NA	118353003	118280037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_118282244_118282830_118283112_118294938_118295062_118295777_118295857_118298732_118298939_118308435_118308578_118313200_118313398_118316181_118316324_118318377_118318557_118331715_118331867_118335472_118335652_118338175_118338315_118352218
transcript_145603.known	chr4	+	473	4	FSM	ENSG00000269893.9	ENST00000688996.1	528	4	49	6	0	0	multi-exon	FALSE	canonical	3	82	junction_1	297.983221004136	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	-4	True	NA	13	True	AATAAA	-19	NA	118278754	118279821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278793_118278943_118279138_118279388_118279432_118279623
transcript_145604.known	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	26	junction_1	320.479155155041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
transcript_145606.known	chr4	+	6165	3	FSM	ENSG00000269893.9	ENST00000654083.2	6166	3	1	0	1	0	multi-exon	FALSE	canonical	3	415	junction_1	198	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATGGAGAGTAATCAAG	NA	False	NA	NA	False	AGTAAA	-38	NA	118278708	118285316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118279138_118279388_118279432_118279623
transcript_145607.known	chr4	+	327	3	FSM	ENSG00000269893.9	ENST00000602520.6	335	3	4	4	1	0	multi-exon	FALSE	canonical	3	282	junction_1	264.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	NA	False	NA	15	True	AATAAA	-21	NA	118278708	118279823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278793_118279388_118279432_118279623
transcript_145608.known	chr4	+	815	2	FSM	ENSG00000269893.9	ENST00000652022.2	818	2	0	3	0	-1	multi-exon	FALSE	canonical	3	415	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118279138_118279388
transcript_145609.known	chr4	+	1105	1	FSM	ENSG00000269893.9	ENST00000667980.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTGTTCCTTGACTGA	-9	True	NA	14	True	AATAAA	-20	NA	118278717	118279822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278700_118279800
transcript_145612.known	chr4	+	6625	11	FSM	ENSG00000145388.15	ENST00000628452.2	6625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.8825812524473	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTCATAATTCATGAA	20	False	NA	18	True	AATAAA	-20	NA	118685412	118715433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118685601_118687922_118688012_118689369_118689469_118691541_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_145621.known	chr4	-	4018	23	FSM	ENSG00000150961.15	ENST00000280551.11	4018	23	0	0	0	0	multi-exon	TRUE	canonical	3	307	junction_18	57.4565052887834	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGATTTATTTATTT	-9	True	NA	-2	True	AATAAA	-19	NA	118836126	118722822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_118723656_118728560_118728651_118731315_118731508_118732732_118732913_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
transcript_145628.known	chr4	-	2786	20	FSM	ENSG00000150961.15	ENST00000419654.6	2786	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	105.870432493942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGAAGATGGAGAGA	2	True	NA	NA	False	NA	NA	NA	118836171	118736551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_118736570_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
transcript_145632.nic	chr4	-	1910	4	ISM	ENSG00000150961.15	ENST00000419654.6	2786	20	-66	79537	-66	-462	5prime_fragment	FALSE	canonical	3	474	junction_3	33.7078955472189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTTGGCGTGGTGGTGT	2422	False	NA	NA	False	NA	NA	NA	118836237	118816088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_118817413_118824619_118824750_118833578_118833738_118835940
transcript_14564.known	chr1	-	1885	12	FSM	ENSG00000176444.19	ENST00000476983.5	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	96.1325703098599	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	197	False	NA	-8	True	AATAAA	-19	NA	155273329	155262873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269717_155270807_155270978_155273200
transcript_145642.known	chr4	-	2671	2	FSM	ENSG00000164096.13	ENST00000504110.2	2671	2	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGTTGATTCTCTTTC	31	False	119300676	NA	False	AATAAA	-15	NA	119300645	119296418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_119298780_119300335
transcript_145645.known	chr4	-	939	2	FSM	ENSG00000283050.3	ENST00000635323.2	1137	2	2	196	2	-3	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAAGCTTGTATACA	NA	False	NA	NA	False	AATAAA	-16	NA	119454628	119449569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_119450126_119454245
transcript_145646.known	chr4	-	6959	21	FSM	ENSG00000138735.16	ENST00000354960.8	6959	21	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_15	12.1453694879983	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGAATACTGTGTGATT	-1	True	NA	-6	True	AATAAA	-16	NA	119628804	119494402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_119498739_119501169_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_145654.nic	chr4	+	1462	10	FSM	ENSG00000245958.7	ENST00000689183.1	1492	10	20	10	0	-10	multi-exon	FALSE	canonical	3	21	junction_6	55.0254710941742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGTATATATATATA	-26	True	NA	47	True	AATAAA	-12	NA	119454813	119499964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119488644_119488718_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_145657.nic	chr4	+	1441	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	-23	20	0	-10	multi-exon	TRUE	canonical	3	82	junction_7	32.714436797842	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGTATATATATATA	NA	False	NA	47	True	AATAAA	-12	NA	119454761	119499964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_145664.known	chr4	-	5227	5	FSM	ENSG00000164109.14	ENST00000296509.11	5227	5	0	0	0	0	multi-exon	FALSE	canonical	3	1198	junction_1	78.7031606735079	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGAAATGGAAACTGTC	-26	True	NA	-12	True	GATAAA	-17	NA	120066848	120055622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120060291_120060873_120060978_120061974_120062096_120065671_120065819_120066661
transcript_145665.known	chr4	-	1277	4	FSM	ENSG00000164109.14	ENST00000333047.9	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	593.265164623337	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTCTTAAAACATTT	-11	True	NA	-20	True	AATAAA	-15	NA	120066833	120059436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120060291_120060873_120060978_120065671_120065819_120066661
transcript_145667.known	chr4	-	5207	16	FSM	ENSG00000138738.11	ENST00000264808.8	5207	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	15.3674981698388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTGTTAGCATTTTA	-7	True	NA	-1	True	AATAAA	-20	NA	120922726	120691914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_145672.known	chr4	-	2338	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	12.1573442991536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-9	True	NA	-49	True	TATAAA	-36	NA	120922858	120694822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_145675.known	chr4	-	2259	14	FSM	ENSG00000138738.11	ENST00000515109.5	2259	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15.8834512518105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-16	True	NA	-49	True	TATAAA	-36	NA	120922865	120694822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120695276_120710308_120710414_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_145681.known	chr4	-	2492	4	FSM	ENSG00000138738.11	ENST00000394435.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.9608770051883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	120922870	120837344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120839275_120853417_120853541_120907473_120907558_120922515
transcript_145685.nnic	chr4	-	842	3	NNC	ENSG00000138738.11	novel	5207	16	NA	NA	-214	4298	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTGATTTGTGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	120923084	120881206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_120881396_120907473_120907558_120922515
transcript_145688.known	chr4	-	2902	4	FSM	ENSG00000173376.14	ENST00000379692.9	2902	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTGGTGTATTCAAT	-4	True	NA	5	True	ATTAAA	-36	NA	121072535	121035612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121037658_121039929_121040055_121045649_121045839_121071992
transcript_145690.known	chr4	-	2339	6	FSM	ENSG00000186867.11	ENST00000394427.3	2339	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	3.26190128606002	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTGCTAGATTGAAT	-4	True	NA	NA	False	NA	NA	NA	121381018	121328641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121329715_121330425_121330524_121332820_121333057_121336806_121336869_121340451_121340611_121380307
transcript_145695.known	chr4	-	1638	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	2152	junction_4	199.186871360093	848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTTTTAAGCTAATAA	-7	True	NA	43	True	ATTAAA	-17	NA	121696980	121667945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_145710.known	chr4	-	2389	5	FSM	ENSG00000164112.14	ENST00000461198.5	2389	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGGCTTTTTA	10	True	NA	NA	False	AATAAA	-21	NA	121765127	121758932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121760475_121761537_121761893_121762726_121762799_121763763_121763873_121764816
transcript_145714.known	chr4	+	1529	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_10	188.49320279522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	-37	True	NA	16	True	ATTAAA	-17	NA	121801319	121816909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
transcript_145717.known	chr4	+	1587	12	FSM	ENSG00000123737.13	ENST00000243498.10	1587	12	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_10	84.5920692607657	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	-34	True	NA	16	True	AATAAA	-13	NA	121801322	121817021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816368_121816448_121816771
transcript_145729.known	chr4	+	1317	11	FSM	ENSG00000123737.13	ENST00000509980.5	1317	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	194.004226758079	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCATTGGAAAAATGGAG	-39	True	NA	NA	False	AATATA	-14	NA	121801317	121815403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121815349
transcript_145731.known	chr4	-	2748	8	FSM	ENSG00000145386.11	ENST00000274026.10	2748	8	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_3	44.6665651334007	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGATTCTTGTCT	7	True	NA	-10	True	AATAAA	-20	NA	121823883	121816443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121817687_121818043_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
transcript_145736.nic	chr4	-	1530	7	ISM	ENSG00000145386.11	ENST00000274026.10	2748	8	-40	1615	-40	-1615	5prime_fragment	FALSE	canonical	3	800	junction_2	47.4672401650748	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACAAAAATTCAAAGTAAG	-33	True	NA	NA	False	NA	NA	NA	121823923	121818058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
transcript_145741.known	chr4	-	3840	19	FSM	ENSG00000138686.10	ENST00000264499.9	3840	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	78.7098320054171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACACATAAGAAAACGGAG	-9	True	NA	NA	False	NA	NA	NA	121870474	121824328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_145745.known	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	79.431718625971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	15	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_145749.known	chr4	-	725	4	FSM	ENSG00000138686.10	ENST00000502444.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	22.6028513442196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGACAACTTGGTTC	-22	True	NA	NA	False	TTTAAA	-24	NA	121870487	121861293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121861680_121863216_121863280_121867980_121868047_121870277
transcript_145753.known	chr4	+	3238	2	FSM	ENSG00000181004.10	ENST00000314218.8	3238	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGATATGTGGTGTTA	20	True	NA	3	True	AATAAA	-16	NA	122732703	122744939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_122732885_122741882
transcript_145755.known	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.204117097743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-16	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
transcript_145756.known	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	25.3968501984006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-14	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
transcript_145759.nic	chr4	-	570	3	ISM	ENSG00000170917.14	ENST00000304430.10	1227	5	-24	19968	-24	-15019	5prime_fragment	FALSE	canonical	0	0	junction_2	53.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	333	False	NA	NA	False	AATAAA	-24	NA	122922621	122912544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_122912624_122917500_122917705_122922334
transcript_145760.nic	chr4	-	489	3	ISM	ENSG00000170917.14	ENST00000339154.6	1065	5	-38	19901	-38	-15019	5prime_fragment	FALSE	canonical	3	53	junction_2	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	NA	False	NA	NA	False	AATAAA	-24	NA	122923006	122912544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_122912624_122917500_122917705_122922800
transcript_145761.known	chr4	+	8116	16	FSM	ENSG00000145375.9	ENST00000274008.5	8116	16	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_14	10.8431237811497	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTCCACATAGAAATTC	-19	True	NA	5	True	ATTAAA	-19	NA	122923077	123319433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123256015_123256181_123313887
transcript_145765.nic	chr4	+	3330	3	NIC	ENSG00000164056.11	novel	2608	3	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	NA	False	NA	NA	False	AATATA	-19	NA	123396729	123403760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_123396933_123397610_123398514_123401536
transcript_145766.known	chr4	+	849	2	FSM	ENSG00000164056.11	ENST00000515726.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCCTGGCCGGTGGCG	2	True	NA	NA	False	NA	NA	NA	123396810	123398337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_123396933_123397610
transcript_145767.known	chr4	+	2348	2	FSM	ENSG00000164056.11	ENST00000339241.1	2348	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTCTCGATTTCTT	-8	True	NA	NA	False	AATATA	-11	NA	123396800	123403752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_123396933_123401536
transcript_145768.known	chr4	+	2352	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	506	False	NA	NA	False	AATATA	-19	NA	123398385	123403760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_123398514_123401536
transcript_145769.known	chr4	-	8798	5	FSM	ENSG00000151458.12	ENST00000504087.6	8798	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	8.97217922246318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCACTTCTTCATGA	-1	True	NA	NA	False	AATAAA	-27	NA	124712732	124664047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_124667515_124668983_124672535_124678675_124678906_124709999_124711275_124712457
transcript_145773.known	chr4	+	13208	16	FSM	ENSG00000164066.13	ENST00000335251.11	13208	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.37988391304616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCCTTTTTCATG	10	True	NA	14	True	AATAAA	-24	NA	127632956	127726737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
transcript_145775.nic	chr4	+	428	2	ISM	ENSG00000164066.13	ENST00000503952.5	3006	17	-42	72788	-33	-345	5prime_fragment	FALSE	canonical	3	27	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAACCCAAACTCAAGC	9967	False	NA	-27	True	AAGAAA	-8	NA	127632923	127643691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_127633181_127643520
transcript_145776.known	chr4	+	10608	19	FSM	ENSG00000164070.12	ENST00000296464.9	10608	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	2.96741563579414	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACACCTGAGGTTTA	16	True	NA	NA	False	AATAAA	-29	NA	127782321	127840733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427_127820566_127822768_127822895_127823516_127823625_127827304_127827425_127830637_127830800_127832682
transcript_145780.known	chr4	+	3838	16	FSM	ENSG00000142731.11	ENST00000270861.10	3838	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	28.0803608713753	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTATATTTTAATGAA	-19	True	NA	NA	False	AATACA	-23	NA	127880892	127899224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886729_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_145789.known	chr4	+	5753	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	20.9138444311152	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCTCAATGTTGCTC	-2	True	NA	NA	False	AATAAA	-16	NA	127965405	128039953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
transcript_145793.known	chr4	-	4422	12	FSM	ENSG00000164073.11	ENST00000641686.2	4422	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	23.9234315789436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAGCTTTAAAACTTTA	-14	True	NA	-19	True	AATAAA	-22	NA	127965173	127917804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_145796.known	chr4	-	1823	11	FSM	ENSG00000164073.11	ENST00000641742.1	1823	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	30.5122926047847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAGAATTAGCCATAG	-20	True	NA	47	True	ATTAAA	-30	NA	127965179	127920264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_145797.known	chr4	-	4261	11	FSM	ENSG00000164073.11	ENST00000641025.1	4261	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	27.9572888528198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTACATTGTGAATGTT	-12	True	NA	-74	True	NA	NA	NA	127965171	127917859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127920837_127921523_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_14580.nic	chr1	-	3245	11	NIC	ENSG00000176444.19	novel	2154	13	NA	NA	-51	0	intron_retention	FALSE	canonical	3	259	junction_9	44.5398697797827	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	155273555	155262867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155269717_155270807_155270978_155273200
transcript_145800.known	chr4	-	4860	10	FSM	ENSG00000164073.11	ENST00000641482.1	4860	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	28.4661375612204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAGAAGAAATTCT	11	True	NA	NA	False	GATAAA	-35	NA	127965148	127917924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_145809.known	chr4	-	886	4	FSM	ENSG00000164073.11	ENST00000641140.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	13.0979218029257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAAATAGATCC	1	True	NA	NA	False	NA	NA	NA	127965219	127943390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127943993_127949803_127949848_127957500_127957593_127965071
transcript_145812.known	chr4	+	3105	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_11	45.098789633939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	-19	True	NA	-21	True	ATTAAA	-22	NA	128061285	128123869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
transcript_145819.known	chr4	+	2151	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	19.9115327336313	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	30	False	NA	12	True	AATAAA	-19	NA	128061334	128108901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_145823.known	chr4	+	2707	9	FSM	ENSG00000138709.19	ENST00000432347.6	2707	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	20.6700266085944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	1	True	NA	12	True	AATAAA	-19	NA	128061347	128108901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
transcript_145827.nic	chr4	+	289	4	ISM	ENSG00000138709.19	ENST00000394288.7	2151	10	-49	31060	0	-31013	5prime_fragment	FALSE	canonical	3	102	junction_1	26.4112770527204	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGGTTGAAAAGAG	-19	True	NA	NA	False	AATAAA	-25	NA	128061285	128077841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787
transcript_145828.known	chr4	+	4606	20	FSM	ENSG00000138709.19	ENST00000649983.1	4606	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	67.5282232983236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTTGAATTGATTTT	-19	True	NA	NA	False	AATAAA	-12	NA	128061513	128211131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128162193_128162318_128176871_128176908_128178430_128178643_128179405_128179513_128199438_128199600_128200520_128200666_128206427_128206538_128207255_128207384_128209855
transcript_145829.known	chr4	-	3785	3	FSM	ENSG00000164040.18	ENST00000520121.6	3785	3	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_2	37	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTGAATGTTTCTCA	-18	True	NA	-5	True	AATAAA	-26	NA	128288829	128269241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_128271414_128272361_128272518_128287372
transcript_145831.known	chr4	-	3311	23	FSM	ENSG00000151466.12	ENST00000651532.1	3311	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.4942226279741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGTGAATGAATAAAGGA	-2	True	NA	NA	False	NA	NA	NA	129093600	128870848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_128871544_128872204_128872323_128873105_128873244_128874414_128874467_128888678_128888775_128891058_128891138_128936654_128936852_128946006_128946153_128948495_128948571_128952768_128952841_128957025_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_145832.known	chr4	-	2096	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	23.2980685894775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTAGTTTTTCTCATTT	1091	False	NA	NA	False	AATAAA	-18	NA	129093377	129036594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_145833.known	chr4	-	1696	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.6646751576104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCAGAATCTGATTG	923	False	129093561	NA	False	AATAAA	-25	NA	129093545	129039192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_145834.known	chr4	-	1604	5	FSM	ENSG00000151466.12	ENST00000503401.1	1604	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	32.7146756059112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTATAAATAAAGAATAAG	-2	True	NA	NA	False	AGTAAA	-23	NA	129093563	129039229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093142
transcript_145845.known	chr4	+	5695	11	FSM	ENSG00000077684.16	ENST00000226319.11	5695	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	116.281726853362	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	-17	True	NA	13	True	AATAAA	-22	NA	128809699	128875224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128809878_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_145847.known	chr4	+	3000	11	FSM	ENSG00000077684.16	ENST00000512960.5	3000	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	213.918582643023	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCAGAAACCCATTAAT	13	False	NA	NA	False	NA	NA	NA	128809918	128872334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128810292_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_145850.known	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	157.677645847469	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	-12	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_145870.known	chr4	+	3560	9	FSM	ENSG00000077684.16	ENST00000511647.5	3560	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	120.101974900499	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGGCATTACTTACA	-14	True	NA	18	True	AATAAA	-19	NA	128809702	128864081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128809878_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_145879.known	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	242.895939653177	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	6	True	NA	8	True	AATAAA	-19	NA	128811325	128864630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_145885.nic	chr4	+	1930	5	ISM	ENSG00000077684.16	ENST00000511647.5	3560	9	-85	13754	-82	1215	5prime_fragment	FALSE	canonical	3	406	junction_1	163.829942318247	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGATTTTTGTCATGG	NA	False	NA	NA	False	NA	NA	NA	128809617	128850327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_128809878_128831732_128831811_128842952_128843039_128846374_128846533_128848979
transcript_145888.known	chr4	+	564	5	FSM	ENSG00000077684.16	ENST00000510308.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	232.551607175698	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACATGGATGCTGCATG	6	True	NA	NA	False	NA	NA	NA	128811287	128849112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979
transcript_145890.known	chr4	+	6170	6	FSM	ENSG00000151470.13	ENST00000281146.9	6170	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15.957443404255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATTAGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	129093316	129116640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_145891.known	chr4	+	5513	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	4.53431361950185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTTGAATTAGTT	11	True	NA	NA	False	AATAAA	-19	NA	129096151	129116637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_145895.known	chr4	-	3484	9	FSM	ENSG00000250241.7	ENST00000656167.1	3484	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	7.08872343937891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTAACACAAGTTACAAA	-5	True	NA	NA	False	TATAAA	-4	NA	133149113	133093300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142605_133142783_133145603_133145746_133147198_133147277_133149028
transcript_145896.known	chr4	-	8044	9	FSM	ENSG00000250241.7	ENST00000667505.1	8044	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5.73230974389905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTCTATTTTCTGG	-4	True	NA	NA	False	TTTAAA	-13	NA	133149147	133088669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_145897.known	chr4	+	8510	5	FSM	ENSG00000138650.9	ENST00000264360.7	8510	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	7.49583217528247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGCTGATTTAGTAAT	1	True	NA	26	True	AATAAA	-36	NA	133149293	133194700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_133152772_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_145899.nic	chr4	+	4485	5	NIC	ENSG00000138650.9	novel	8510	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	48.0852108241193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTACTAACTTTAGTGAA	-3	True	NA	25	True	AATAAA	-21	NA	133149289	133208606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_133152772_133154306_133154366_133154916_133155024_133162976_133163283_133208075
transcript_145901.nic	chr4	+	4565	4	ISM	ENSG00000138650.9	ENST00000264360.7	8510	5	-4	30807	-4	10005	5prime_fragment	FALSE	canonical	3	110	junction_2	1.63299316185545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGAATATTTATTTTAG	-3	True	NA	NA	False	AGTAAA	-30	NA	133149289	133163893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_133152772_133154306_133154366_133154916_133155024_133162976
transcript_145903.known	chr4	+	4574	1	FSM	ENSG00000138650.9	ENST00000618019.1	4574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCTTATTGAGCGTG	4	False	NA	21	True	AATAAA	-30	NA	133149314	133153888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_133149300_133153900
transcript_145904.known	chr4	-	1460	2	FSM	ENSG00000286467.1	ENST00000669848.1	1460	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATGATCTTTGTGTAA	0	True	NA	NA	False	TATAAA	-12	NA	133263115	133261021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_133261995_133262628
transcript_145908.known	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	31.6262900483478	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	26	True	NA	-17	True	AATAAA	-18	NA	137532459	137519702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
transcript_145911.known	chr4	-	9645	12	FSM	ENSG00000151012.13	ENST00000280612.9	9645	12	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	5.51182050589968	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCGTCATGTTTTGC	-3	True	NA	NA	False	AATAAA	-20	NA	138242349	138164096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_138172018_138179216_138179395_138180640_138180791_138182296_138182394_138183201_138183306_138185120_138185245_138214584_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
transcript_145913.known	chr4	-	1965	7	FSM	ENSG00000109381.21	ENST00000510408.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	47.8553956089477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACTACGATATCAAG	6	True	NA	NA	False	AAAAAG	-18	NA	139084325	139058718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139084132
transcript_145914.known	chr4	-	3036	7	FSM	ENSG00000109381.21	ENST00000358635.7	3036	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	49.2803769826851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTCTGGTGATATT	NA	False	NA	2	True	AATATA	-21	NA	139084496	139057854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139084132
transcript_145919.known	chr4	-	2766	6	FSM	ENSG00000109381.21	ENST00000379549.7	2766	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	68.2653645709155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAATGAAATTTATCT	-6	True	NA	-22	True	NA	NA	NA	139084337	139057878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139071865_139072040_139073453_139073568_139084132
transcript_145923.known	chr4	-	2219	4	FSM	ENSG00000109381.21	ENST00000514606.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	27.7968823191858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACATTGAACACATTCA	-7	True	NA	NA	False	AAGAAA	-44	NA	139084338	139066009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139067771_139071865_139072004_139073453_139073568_139084132
transcript_145925.nic	chr4	-	527	3	ISM	ENSG00000109381.21	ENST00000514606.1	2219	4	-70	5857	-70	-5857	5prime_fragment	FALSE	canonical	3	63	junction_2	18.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	NA	False	NA	NA	False	AAAAAG	-7	NA	139084408	139071866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_139072004_139073453_139073568_139084132
transcript_145926.nic	chr4	-	626	3	ISM	ENSG00000109381.21	ENST00000358635.7	3036	7	25	14012	25	-5857	5prime_fragment	FALSE	canonical	3	63	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	NA	False	NA	NA	False	AAAAAG	-7	NA	139084471	139071866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_139072040_139073453_139073568_139084132
transcript_145927.known	chr4	-	1434	3	FSM	ENSG00000109381.21	ENST00000511006.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTGAACCCGAGAGGC	-7	True	NA	NA	False	NA	NA	NA	139177218	139136770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139137868_139139412_139139498_139176966
transcript_145928.known	chr4	+	1962	3	FSM	ENSG00000151014.6	ENST00000280614.4	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCTTGTGTTGTTTTC	10	True	NA	31	True	ATTAAA	-32	NA	139015780	139045939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139016172_139043073_139043344_139044638
transcript_145929.known	chr4	+	6072	20	FSM	ENSG00000164134.13	ENST00000398947.1	6072	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_17	79.7179237588452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTGGAAAAGATTAC	73	False	NA	-7	True	AATAAA	-1	NA	139301587	139391368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384834_139384979_139386132_139386231_139387883
transcript_145930.nic	chr4	+	2203	15	ISM	ENSG00000164134.13	ENST00000296543.10	6174	20	-74	21071	-74	-9022	5prime_fragment	FALSE	canonical	3	335	junction_4	29.2212705586397	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGCAGAGAAATCAGAAAA	NA	False	NA	5	True	AAAAAG	-5	NA	139301430	139370313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210
transcript_145932.known	chr4	-	761	6	FSM	ENSG00000109390.13	ENST00000394228.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	1537.03681153055	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	NA	False	NA	2	True	AATAAA	-40	NA	139302551	139289916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139296331_139296368_139302415
transcript_145933.known	chr4	-	1257	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	1536.54724626352	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	1312	False	NA	2	True	AATAAA	-40	NA	139301210	139289916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
transcript_145934.known	chr4	-	1198	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1338.35206504118	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	1312	False	NA	2	True	AATAAA	-40	NA	139301210	139289916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
transcript_145935.known	chr4	-	664	5	FSM	ENSG00000109390.13	ENST00000394225.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	1292.0734063899	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-4	True	NA	-34	True	AATAAA	-14	NA	139302526	139289952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
transcript_145936.known	chr4	-	1224	4	FSM	ENSG00000137463.5	ENST00000398955.2	1224	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	4.96655480858378	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTCTACTTTTTTC	-15	True	NA	NA	False	AATAAA	-13	NA	139280225	139266164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139280076
transcript_145939.known	chr4	-	696	6	FSM	ENSG00000109390.13	ENST00000394223.2	696	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	1535.81241041997	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTGTGACAACTTGTA	10	True	NA	-12	True	AATAAA	-36	NA	139302477	139289930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139302415
transcript_145940.known	chr4	-	627	3	FSM	ENSG00000273247.6	ENST00000609359.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATGGTACTGGCATTA	-1	True	NA	NA	False	NA	NA	NA	139454034	139413823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139414025_139415936_139416013_139453684
transcript_145943.known	chr4	+	4248	2	FSM	ENSG00000172007.7	ENST00000305626.6	4248	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGTCCTTGAAGAACT	4	True	NA	NA	False	NA	NA	NA	139454120	139476609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139454445_139472685
transcript_145947.known	chr4	-	1602	8	FSM	ENSG00000145391.14	ENST00000506866.6	1602	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.25599640167146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAACCCAGGTTATTAG	1161	False	139556252	NA	False	AATAAA	-15	NA	139556238	139495940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139496522_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_145948.known	chr4	-	1590	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGTTGGAAATTAATG	630	False	NA	NA	False	ATTAAA	-20	NA	139556769	139532578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139533367_139546919_139547050_139556097
transcript_145952.known	chr4	-	6844	5	FSM	ENSG00000196782.13	ENST00000509479.6	6844	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	4.02336923485777	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGTATAGTTTATTTT	17	True	NA	-7	True	AATAAA	-17	NA	140154184	139716752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139720324_139725750_139725836_139730415_139730668_139889356_139890968_140152859
transcript_145953.known	chr4	+	437	6	FSM	ENSG00000085871.9	ENST00000515067.1	437	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	384.148200568479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCTGGGAATTGCAAAC	-1	True	NA	NA	False	NA	NA	NA	139666027	139704068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139666078_139678542_139678643_139687659_139687741_139695196_139695268_139703454_139703537_139704015
transcript_145955.known	chr4	+	740	5	FSM	ENSG00000085871.9	ENST00000265498.6	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	39.7020150622106	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGAAATGGCTTTGTA	-1	True	NA	21	True	AATAAA	-21	NA	139665818	139704243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139666078_139678542_139678643_139695196_139695268_139703454_139703537_139704015
transcript_145956.known	chr4	+	634	4	FSM	ENSG00000085871.9	ENST00000506797.5	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	343.636435786428	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTTTATTCTGTTT	15	False	NA	2	True	AATAAA	-2	NA	139665834	139704224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139666078_139678542_139678643_139703454_139703537_139704015
transcript_145958.known	chr4	+	4995	4	FSM	ENSG00000153130.18	ENST00000608372.6	4995	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_3	14.522013940528	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGGTGATTGTCAT	4	True	NA	NA	False	AATAAA	-20	NA	140373645	140385728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_140373718_140379120_140379193_140379568_140379653_140380961
transcript_145959.known	chr4	+	1838	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	300	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	NA	False	NA	25	True	AATAAA	-8	NA	140373535	140382545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_140373718_140379120_140379193_140380961
transcript_145961.known	chr4	-	453	3	FSM	ENSG00000196951.12	ENST00000608178.6	478	3	25	0	3	0	multi-exon	FALSE	canonical	3	51	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCCGTACTTTCTCTG	12	True	NA	NA	False	AATAAA	-14	NA	140373381	140360681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140360975_140369309_140369351_140373262
transcript_145962.known	chr4	-	2725	15	FSM	ENSG00000153132.13	ENST00000325617.10	2725	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	5.07746120072797	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTATTTGACAGGTTAT	2	True	NA	2	True	AATAAA	-25	NA	140427648	140388452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140389305_140390627_140390729_140392218_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_145968.known	chr4	+	4399	9	FSM	ENSG00000179387.10	ENST00000323570.8	4399	9	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	16.6038399173203	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	0	True	NA	15	True	AATAAA	-18	NA	140524167	140553770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_140524281_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
transcript_145972.known	chr4	-	1621	6	FSM	ENSG00000109424.4	ENST00000262999.4	1621	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	0.4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTTGAGATCTAT	-1	True	NA	NA	False	AATAAA	-22	NA	140568961	140559430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140560011_140562192_140562374_140563109_140563212_140563317_140563519_140567778_140567978_140568603
transcript_145973.known	chr4	-	5554	21	FSM	ENSG00000109436.8	ENST00000442267.3	5554	21	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_17	3.98089185987261	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTTTTATCTTTGTG	-28	True	NA	-10	True	AATAAA	-19	NA	140756385	140620781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140622918_140624115_140624220_140624313_140624389_140627440_140627528_140628299_140628366_140633947_140634189_140639085_140639155_140639329_140639429_140657096_140657227_140657526_140657813_140659587_140659706_140661892_140662108_140668916_140669068_140669633_140669805_140670719_140670927_140676893_140677102_140678941_140679204_140679614_140679844_140686343_140686463_140701503_140701615_140755915
transcript_145977.known	chr4	+	1891	10	FSM	ENSG00000109445.11	ENST00000262990.9	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	31.1214268611923	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGACATTATATTTA	-34	True	NA	NA	False	AATAAA	-19	NA	141220894	141234697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_141221109_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_145984.known	chr4	+	733	2	FSM	ENSG00000109445.11	ENST00000514826.5	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTACCTGTGCTAAGTG	-42	True	NA	NA	False	NA	NA	NA	141220886	141222876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_141221109_141222365
transcript_145986.known	chr4	+	2015	8	FSM	ENSG00000164136.17	ENST00000320650.9	2015	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.8070158058105	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTAATACTCACTGAG	-2	True	NA	NA	False	TATAAA	-16	NA	141636582	141733987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_141636749_141656185_141656308_141719365_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
transcript_145990.known	chr4	+	7081	10	FSM	ENSG00000170185.11	ENST00000307017.9	7081	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4.83045891539648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAATATTCCTGAAGTA	-1	True	NA	116	True	NA	NA	NA	143184916	143223874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143186133_143187825_143187962_143195715_143195846_143197822_143197925_143203407_143203567_143206032_143206227_143209563_143209658_143212317_143212425_143213580_143214944_143220294
transcript_145993.known	chr4	+	4618	10	FSM	ENSG00000170185.11	ENST00000683224.1	4618	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.5058912041866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGAGTTTTACATTTG	7	True	NA	9	True	ATTAAA	-14	NA	143184966	143221487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143186133_143187825_143187936_143195715_143195846_143197822_143197925_143203407_143203567_143206032_143206227_143209563_143209658_143212317_143212425_143213580_143214944_143220294
transcript_145994.known	chr4	+	7981	11	FSM	ENSG00000109458.9	ENST00000262995.8	7981	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	11.0018180315801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGAACCTCATTCAA	184	False	NA	NA	False	AGTAAA	-19	NA	143336761	143474568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143337261_143415476_143415772_143433490_143433717_143437998_143438601_143439801_143439888_143440078_143440383_143457679_143457770_143459384_143459479_143460363_143460488_143466102_143466226_143469030
transcript_145995.known	chr4	+	2648	10	FSM	ENSG00000109458.9	ENST00000262994.9	7774	10	11	5115	11	43	multi-exon	FALSE	canonical	3	20	junction_3	6.62393713812839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTACTGTATTTATGC	3	True	NA	NA	False	NA	NA	NA	143336886	143469450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143337261_143415476_143415772_143433490_143433717_143437998_143438601_143439801_143439888_143440078_143440383_143459384_143459479_143460363_143460488_143466102_143466226_143469030
transcript_145997.known	chr4	+	7684	24	FSM	ENSG00000153147.6	ENST00000283131.4	7684	24	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_9	145.577242243962	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCATGTGATTATTT	-19	True	NA	5	True	ATTAAA	-16	NA	143513701	143557486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996_143550105_143553118
transcript_146000.nic	chr4	+	3505	23	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-247	7440	-247	1828	5prime_fragment	FALSE	canonical	3	1359	junction_9	147.7533962916	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGGAACTAGAAGAAAAGG	-39	True	NA	16	True	NA	NA	NA	143513454	143550046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996
transcript_146004.nic	chr4	+	3307	22	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-247	9494	-247	-226	5prime_fragment	FALSE	canonical	3	1359	junction_9	147.845448506171	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATACTGAAGAAGAAGATC	-39	True	NA	NA	False	NA	NA	NA	143513454	143547992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927
transcript_146008.nic	chr4	+	2912	19	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-247	11517	-247	1613	5prime_fragment	FALSE	canonical	3	1359	junction_9	145.124467651431	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAACAGCTTAAAATTGA	-39	True	NA	NA	False	NA	NA	NA	143513454	143545969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924
transcript_146012.nic	chr4	+	2835	18	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-247	11935	-247	1195	5prime_fragment	FALSE	canonical	3	1359	junction_9	136.902485943242	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTTACAGAAAAACT	-39	True	NA	NA	False	AAAAAG	-4	NA	143513454	143545551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469
transcript_146014.nic	chr4	+	2687	17	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-247	12705	-247	425	5prime_fragment	FALSE	canonical	3	1359	junction_9	137.264798837867	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACTATGCCGTTGATGC	-39	True	NA	NA	False	AAGAAA	-2	NA	143513454	143544781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736
transcript_146015.nic	chr4	+	2641	16	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-247	13515	-247	-385	5prime_fragment	FALSE	canonical	3	1359	junction_9	140.423581432116	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATTTAGAAATAGGTTT	-39	True	NA	44	True	AAAACA	-4	NA	143513454	143543971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852
transcript_146028.nic	chr4	+	720	2	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-247	40059	-247	-26929	5prime_fragment	FALSE	canonical	3	1376	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATGTTCTAGGCTTGTG	-39	True	NA	NA	False	AAGAAA	-4	NA	143513454	143517427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354
transcript_146029.known	chr4	-	564	5	FSM	ENSG00000250361.9	ENST00000502664.6	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	3.278719262151	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTATTATAGTCATGA	-1	True	NA	NA	False	AATAAA	-24	NA	144019380	143996103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_143996305_143997539_143997635_143999410_143999450_144001184_144001284_144019250
transcript_146030.known	chr4	+	9937	13	FSM	ENSG00000164161.10	ENST00000296575.8	9937	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.7269277022302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATGTGCTATTTTAAA	-19	True	NA	NA	False	ATTAAA	-19	NA	144646155	144745271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636_144659839_144706530_144706683_144707086_144707261_144708167_144708312_144711949_144712072_144714224_144714349_144715299_144715431_144718874_144718957_144734740_144734890_144737763
transcript_146031.known	chr4	+	1770	4	FSM	ENSG00000164161.10	ENST00000434550.2	1770	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCTTGTACAATGTTT	-3	True	NA	NA	False	CATAAA	-19	NA	144646171	144660273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636
transcript_146033.known	chr4	-	1094	2	FSM	ENSG00000248890.3	ENST00000508269.2	1097	2	0	3	0	-3	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGTTTTATGTATGGA	13	True	NA	NA	False	AATAAA	-17	NA	144645987	144642921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144643735_144645706
transcript_146035.known	chr4	-	689	7	FSM	ENSG00000164162.14	ENST00000513054.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	107.649766475465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACCAGTAGAAGAGAGC	390	False	NA	NA	False	ATTAAA	-5	NA	145098180	144995455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097494_145097563_145097687_145097761_145098119
transcript_146037.known	chr4	-	928	6	FSM	ENSG00000164162.14	ENST00000451299.6	928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	107.745255115945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	15	True	NA	NA	False	AATAAA	-27	NA	145098189	144995157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_146040.nic	chr4	-	922	6	NIC	ENSG00000164162.14	novel	963	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	104.660594303682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTTGAAGCCAATC	-17	True	NA	NA	False	AATAAA	-24	NA	145098221	144995160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145098119
transcript_146041.known	chr4	-	471	5	FSM	ENSG00000164162.14	ENST00000506851.5	471	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.886408701913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTAAGTTACTGCT	-9	True	NA	NA	False	ACTAAA	-1	NA	145098213	144967111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144967161_145064571_145064693_145081659_145081751_145095984_145096112_145098130
transcript_146043.known	chr4	-	868	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	79.8342031963744	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-9	True	NA	NA	False	AATAAA	-27	NA	145098213	144995157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
transcript_146053.known	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	106.615612782035	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	13	True	NA	NA	False	AATAAA	-31	NA	145098191	144995195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
transcript_146054.known	chr4	-	7741	21	FSM	ENSG00000164164.17	ENST00000447906.8	7741	21	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_11	22.2694297187871	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGTGATTCTTTGG	34	False	145180623	-5	True	ATTAAA	-14	NA	145180589	145133649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145138651_145139950_145139992_145141378_145141640_145142195_145142335_145143364_145143446_145143945_145144002_145144310_145144435_145146266_145146430_145150512_145150700_145150801_145150906_145152540_145152636_145155410_145155476_145155568_145155687_145155935_145155997_145159502_145159636_145162639_145162722_145164153_145164227_145165150_145165198_145171669_145171721_145174660_145174745_145179814
transcript_146057.known	chr4	+	3887	18	FSM	ENSG00000164163.11	ENST00000296577.9	3887	18	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_11	78.4887535196333	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTTGACAAGGACAAT	4	True	NA	NA	False	AATAAA	-20	NA	145098310	145129524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
transcript_146069.nic	chr4	+	1204	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-51	7547	-28	2611	5prime_fragment	FALSE	canonical	3	626	junction_10	73.0540211076707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTTAAAAAGATGTG	346	False	NA	NA	False	AATGAA	-1	NA	145098259	145120026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_146070.nic	chr4	+	1256	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-51	7495	-28	2663	5prime_fragment	FALSE	canonical	3	626	junction_10	73.0540211076707	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGAATTTGAGCTAGCA	346	False	NA	NA	False	TATAAA	-23	NA	145098259	145120078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_146073.nic	chr4	+	1881	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	42.9249991910956	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	182	False	NA	NA	False	TTTAAA	-2	NA	145481590	145558079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_145481753_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_146074.nnic	chr4	+	1844	7	NNC	ENSG00000170365.10	novel	3293	3	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	41.551841782953	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	211	False	NA	NA	False	TTTAAA	-2	NA	145481619	145558079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_145481745_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_146076.known	chr4	+	3002	7	FSM	ENSG00000170365.10	ENST00000302085.9	3002	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	20.6188964032726	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCATTTCCTTTATTCA	-4	True	NA	NA	False	AATAAA	-31	NA	145481852	145559176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145482039_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_146077.nic	chr4	+	2115	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	-174	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	43.6144726234563	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	455	False	NA	NA	False	TTTAAA	-2	NA	145482311	145558079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_145482708_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_146079.known	chr4	+	2085	7	FSM	ENSG00000170365.10	ENST00000515385.1	2085	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	47.4368000607124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	20	True	NA	NA	False	TTTAAA	-2	NA	145482810	145558079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145483177_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_146083.known	chr4	+	5944	7	FSM	ENSG00000151611.17	ENST00000649156.2	5944	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.93821943216622	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGGGATCATGTAGT	1	True	NA	3	True	GATAAA	-18	NA	145619384	145660033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_146089.known	chr4	-	7651	15	FSM	ENSG00000151612.18	ENST00000508784.6	7651	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	9.06917857360853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTCTTTTTCTTTT	16	True	NA	NA	False	ATTAAA	-22	NA	145938823	145757626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145763089_145763123_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_146090.known	chr4	-	7187	14	FSM	ENSG00000151612.18	ENST00000503462.3	7187	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.55024086563873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATACTCTAATTAAAAAA	593	False	NA	NA	False	NA	NA	NA	145938430	145757664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_146095.known	chr4	-	4094	14	FSM	ENSG00000151612.18	ENST00000656985.1	4094	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	10.0731055599205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACCAAAAACAGAGAGACAA	-2	True	NA	NA	False	NA	NA	NA	145938422	145760762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145764974_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_146096.known	chr4	-	4097	15	FSM	ENSG00000151612.18	ENST00000652097.1	4097	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.7383064069618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTTCTGTACCAAAA	-2	True	NA	NA	False	NA	NA	NA	145938422	145760774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145763089_145763118_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_146098.known	chr4	+	549	5	FSM	ENSG00000164167.12	ENST00000504181.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	540.165946723782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAATTGGAAAGCCAA	16	True	NA	NA	False	AATAAA	-1	NA	146175747	146190187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_146175812_146182911_146183016_146187273_146187388_146189621_146189782_146190080
transcript_146100.known	chr4	+	454	4	FSM	ENSG00000164167.12	ENST00000649747.1	454	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	611.187005388331	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCACTGACATGTGAGT	-4	True	NA	-36	True	NA	NA	NA	146175727	146189767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_146175812_146182905_146183016_146187273_146187388_146189621
transcript_146102.known	chr4	+	1352	4	FSM	ENSG00000164167.12	ENST00000502781.5	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	594.688153572946	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTTTATTGCATCCTT	-3	True	NA	14	True	ATTAAA	-15	NA	146175728	146190046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_146176438_146182911_146183016_146187273_146187388_146189621
transcript_146106.known	chr4	-	2178	13	FSM	ENSG00000137473.19	ENST00000325106.9	2178	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	1.73205080756888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTAAGTCCTTCAAT	-9	True	NA	NA	False	AATAAA	-24	NA	146945864	146706616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_146707189_146707484_146707552_146803456_146803686_146820124_146820249_146833805_146833898_146867497_146867584_146874715_146874929_146903543_146903730_146909025_146909250_146937593_146937678_146939803_146939902_146945030_146945078_146945708
transcript_146107.known	chr4	-	1777	13	FSM	ENSG00000137473.19	ENST00000504425.5	1777	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5603819159562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGATTTTGCATTTCAGT	3	True	NA	NA	False	AATAAA	-20	NA	146945882	146707032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_146707189_146707484_146707549_146803456_146803686_146820124_146820249_146833805_146833898_146867497_146867584_146874715_146874929_146903543_146903730_146909025_146909250_146937593_146937678_146939803_146939902_146945030_146945078_146945708
transcript_146108.known	chr4	+	3970	8	FSM	ENSG00000151617.17	ENST00000651419.1	3970	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	3.44045559394066	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCTCTTCATTTTTA	-8	True	NA	11	True	AATAAA	-18	NA	147481096	147544954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147481377_147485611_147486102_147519850_147519979_147532505_147532705_147535876_147536030_147539816_147539951_147540376_147540486_147542477
transcript_146113.known	chr4	-	3461	12	FSM	ENSG00000164169.13	ENST00000322396.7	3461	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	27.0432772232806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCGTGCTCTTTGTA	-21	True	NA	NA	False	AATAAA	-25	NA	147684163	147637784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147680322_147680472_147683798
transcript_146116.known	chr4	-	2674	11	FSM	ENSG00000164169.13	ENST00000514886.1	2674	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	45.2013274141369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGGGTAGCATTAT	17	True	NA	-8	True	AATAAA	-20	NA	147684125	147638384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147683798
transcript_146117.nnic	chr4	+	2733	10	NNC	ENSG00000164168.8	novel	4164	10	NA	NA	-28	693	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	110.794103332864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCAACTTTTTTATG	NA	False	NA	10	True	AATAAA	-18	NA	147617357	147635221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632872_147633003_147633764_147633937_147634168
transcript_146118.known	chr4	+	4164	10	FSM	ENSG00000164168.8	ENST00000296582.8	4164	10	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_9	32.2042095247052	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAAGGGTTAGTATCC	-7	True	NA	NA	False	AGTAAA	-22	NA	147617396	147636721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632902_147633003_147633764_147633937_147634168
transcript_146128.known	chr4	+	3270	23	FSM	ENSG00000071205.12	ENST00000336498.8	3270	23	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_21	7.67105216527134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGTCTGTCCTAAT	-20	True	NA	14	True	AATAAA	-14	NA	147732087	148072776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148063147_148063301_148064415_148064508_148071992
transcript_146130.nic	chr4	+	3298	22	NIC	ENSG00000071205.12	novel	3270	23	NA	NA	-157	0	intron_retention	FALSE	canonical	3	22	junction_20	6.57556805440376	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTGTCTGTCCTAA	NA	False	NA	13	True	AATAAA	-13	NA	147731905	148072775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148064415_148064508_148071992
transcript_146133.known	chr4	+	1559	5	FSM	ENSG00000071205.12	ENST00000510379.1	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTGTGTGTATGGT	1	True	NA	NA	False	TTTAAA	-19	NA	147732062	147858488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552
transcript_146140.known	chr4	-	2140	2	FSM	ENSG00000198589.14	ENST00000514435.1	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTACTTTTGAAGAAT	-6	True	NA	NA	False	AAAAAG	-4	NA	151015284	151012804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151014862_151015201
transcript_146143.known	chr4	-	5207	20	FSM	ENSG00000109686.19	ENST00000604030.7	5207	20	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	33.0358656773609	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCTCATACTAGACTGA	9	True	NA	-2	True	AATAAA	-22	NA	151325605	151120280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046_151226087_151325240
transcript_146146.known	chr4	+	674	6	FSM	ENSG00000145425.10	ENST00000507327.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	1	83	junction_1	7128.5248796648	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTGAAGGCAGTAGTT	26	False	NA	NA	False	NA	NA	NA	151099668	151104490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151099713_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_146149.known	chr4	+	985	6	FSM	ENSG00000145425.10	ENST00000514682.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7160.45952156704	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	18	True	NA	13	True	AATAAA	-16	NA	151099628	151104637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151099837_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_146157.known	chr4	+	576	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8514.79032168275	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	13	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
transcript_146160.known	chr4	+	11517	14	FSM	ENSG00000164142.16	ENST00000435205.6	11517	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.1707318803638	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTCATTTATTC	-8	True	NA	40	True	ATTAAA	-17	NA	151409175	151670503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151409466_151454700_151454809_151482523_151482649_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
transcript_146169.known	chr4	+	604	4	FSM	ENSG00000164142.16	ENST00000508198.5	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.7082522694727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATCGGTTTCGA	3	True	NA	NA	False	ATTAAA	-32	NA	151409215	151566258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151409466_151454700_151454809_151482523_151482649_151566137
transcript_146171.nic	chr4	-	2214	13	NIC	ENSG00000059691.12	novel	2369	13	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	40.617029132564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTTCATTCTGCAGT	NA	False	NA	-4	True	AATAAA	-34	NA	151761033	151670837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_151671303_151672608_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_146173.known	chr4	-	2369	13	FSM	ENSG00000059691.12	ENST00000263985.11	2369	13	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	20.0005208265518	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCCAATAAATTTA	-10	True	NA	NA	False	AATAAA	-14	NA	151761007	151670503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_146176.nnic	chr4	-	1915	12	NIC	ENSG00000059691.12	novel	2369	13	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	39.8339528750649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTCTAAGAAAACTTTT	NA	False	NA	-15	True	AATAAA	-23	NA	151761033	151670848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_151671303_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_146177.known	chr4	-	1519	8	FSM	ENSG00000059691.12	ENST00000512306.5	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.025224930956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATTGAAACTTTTA	12	True	NA	NA	False	AATAAA	-21	NA	151760985	151703341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_146178.known	chr4	-	605	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	88	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTTTACTGCC	7	True	NA	2	True	ATTAAA	-24	NA	151760990	151721945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151722216_151758771_151758923_151760806
transcript_14618.known	chr1	+	3838	8	FSM	ENSG00000143630.10	ENST00000368358.4	3838	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.37647947509825	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGCTCTTGGTTTGTG	-5	True	NA	NA	False	TATAAA	-14	NA	155277462	155289848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155277869_155282410_155282841_155283973_155284136_155284538_155284758_155285164_155285312_155285723_155285965_155287172_155287338_155287780
transcript_146180.known	chr4	+	3000	1	FSM	ENSG00000268471.6	ENST00000604157.1	3000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTATATATGAGTCCCA	-21	True	NA	42	True	AATAAA	-39	NA	152536263	152539263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152536300_152539300
transcript_146181.known	chr4	-	10534	7	FSM	ENSG00000170006.12	ENST00000304385.8	10534	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGCTTCTCTTCTTT	5	True	NA	NA	False	ATTAAA	-28	NA	152679997	152618627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152628562_152640927_152640986_152643087_152643174_152644414_152644443_152652537_152652577_152652666_152652928_152679869
transcript_146183.known	chr4	-	2438	2	FSM	ENSG00000169989.3	ENST00000304337.3	2438	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTTAATTGCAAAA	15	True	NA	NA	False	CATAAA	-18	NA	152779730	152769353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152771543_152779481
transcript_146188.known	chr4	+	3424	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	83.9455738857029	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	-34	True	NA	NA	False	AATAAA	-21	NA	152779936	152912357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_146189.known	chr4	+	3542	9	FSM	ENSG00000164144.16	ENST00000353617.7	3542	9	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	63.5231257102482	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	-17	True	NA	NA	False	AATAAA	-21	NA	152779953	152912357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_146194.known	chr4	+	1601	8	FSM	ENSG00000164144.16	ENST00000405727.6	1601	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	78.8778440736959	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAAACTATTT	0	True	NA	NA	False	ATTAAA	-30	NA	152779970	152910664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_146196.known	chr4	+	1302	8	FSM	ENSG00000164144.16	ENST00000356064.3	1302	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	45.7116070643788	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGTTGTTATATTTCTA	14	True	NA	NA	False	AATAAA	-7	NA	152779984	152910244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_146202.known	chr4	+	6597	12	FSM	ENSG00000137460.10	ENST00000511601.6	6597	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	4.7742421838185	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTTCATCTCAGCTT	-20	True	NA	15	True	AATAAA	-17	NA	152936322	152979671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152936410_152942927_152943556_152953498_152953561_152954216_152954320_152960564_152960651_152960743_152960845_152962813_152962885_152963022_152963131_152964904_152964976_152967979_152968098_152972376_152972542_152974674
transcript_146205.known	chr4	-	1048	2	FSM	ENSG00000287642.2	ENST00000685840.1	1344	2	120	176	116	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	84	False	NA	NA	False	AATAAA	-16	NA	152936761	152934515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152935451_152936648
transcript_146206.known	chr4	+	7548	13	FSM	ENSG00000109654.16	ENST00000674976.1	7548	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	68.7513131187729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAGAGTGAATATTTA	-1	True	NA	13	True	AATAAA	-14	NA	153204442	153339316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153222242_153223040_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146207.known	chr4	+	6701	12	FSM	ENSG00000109654.16	ENST00000675239.1	6701	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	57.4982572499103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTTTCTCCATTTG	-1	True	NA	-2	True	NA	NA	NA	153204442	153339301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322779_153324077_153324149_153328529_153328671_153334813
transcript_146208.known	chr4	+	6755	12	FSM	ENSG00000109654.16	ENST00000338700.10	6755	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	30.7525447445323	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	-1	True	NA	14	True	AATAAA	-15	NA	153204442	153339317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146210.known	chr4	+	6699	12	FSM	ENSG00000109654.16	ENST00000676029.1	6699	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	56.069909138002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	-1	True	NA	8	True	AATAAA	-9	NA	153204442	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275942_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146211.known	chr4	+	6686	12	FSM	ENSG00000109654.16	ENST00000675340.1	6686	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	63.063394576705	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	2	True	NA	8	True	AATAAA	-9	NA	153204445	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294429_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146212.known	chr4	+	6752	12	FSM	ENSG00000109654.16	ENST00000675293.1	6752	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	44.3990171881397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	-1	True	NA	14	True	AATAAA	-15	NA	153204442	153339317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146214.known	chr4	+	6871	12	FSM	ENSG00000109654.16	ENST00000675977.1	6871	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	43.8713370536622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	NA	False	NA	8	True	AATAAA	-9	NA	153257367	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153257608_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146216.known	chr4	+	7016	12	FSM	ENSG00000109654.16	ENST00000676252.1	7016	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	54.062406546998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	-6	True	NA	8	True	AATAAA	-9	NA	153257378	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153257767_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146219.known	chr4	+	6413	10	FSM	ENSG00000109654.16	ENST00000675425.1	6413	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	59.9866240234304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	2	True	NA	8	True	AATAAA	-9	NA	153204445	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146220.known	chr4	+	6412	10	FSM	ENSG00000109654.16	ENST00000675492.1	6412	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	68.3305329146134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	0	True	NA	8	True	AATAAA	-9	NA	153204443	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146222.known	chr4	+	6524	10	FSM	ENSG00000109654.16	ENST00000674730.1	6524	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	71.7910204502203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	-6	True	NA	8	True	AATAAA	-9	NA	153257378	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153257608_153270337_153270520_153275892_153276131_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146224.known	chr4	+	5671	9	FSM	ENSG00000109654.16	ENST00000676224.1	5671	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	75.0415509901015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	17	True	NA	8	True	AATAAA	-9	NA	153204460	153339311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146225.known	chr4	+	679	3	FSM	ENSG00000109654.16	ENST00000632856.2	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	39	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	-1	True	NA	14	True	ATTAAA	-17	NA	153204442	153276268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892
transcript_146226.known	chr4	+	676	3	FSM	ENSG00000109654.16	ENST00000441616.6	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	66	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	-1	True	NA	14	True	ATTAAA	-17	NA	153204442	153276268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892
transcript_146227.known	chr4	+	766	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	65	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	18	False	NA	14	True	ATTAAA	-17	NA	153257402	153276268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153257608_153270334_153270520_153275892
transcript_146229.known	chr4	+	3828	12	FSM	ENSG00000109654.16	ENST00000437508.7	3828	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	54.6066323583561	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAACCACACACA	2	True	NA	NA	False	NA	NA	NA	153153117	153336358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153153271_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_146231.known	chr4	+	3962	18	FSM	ENSG00000288637.1	ENST00000675079.1	3962	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	104.551836450587	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATCTCAGTCCAGGCA	NA	False	NA	-8	True	AATAAA	-5	NA	153222058	153415081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153223040_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322829_153324077_153324149_153328529_153328671_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_146232.known	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	34.1461444920722	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	-11	True	NA	29	True	AATAAA	-42	NA	153344687	153415118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_146234.known	chr4	+	830	7	FSM	ENSG00000121211.8	ENST00000622785.4	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	114.373656640563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAGATTTACAAATGAT	-1	True	NA	6	True	AATAAA	-19	NA	153344648	153415095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153408970_153409016_153414750
transcript_146238.known	chr4	+	5006	35	FSM	ENSG00000121210.16	ENST00000409959.8	5006	35	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	18.4578684190346	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	3	True	NA	99	True	AATAAA	-14	NA	153466359	153636711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
transcript_146245.nic	chr4	+	3241	25	ISM	ENSG00000121210.16	ENST00000409959.8	5006	35	-48	32544	-34	553	5prime_fragment	FALSE	canonical	3	115	junction_11	17.9802650301812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTACTGAATAAAGAAGAAA	NA	False	NA	NA	False	CATAAA	-37	NA	153466311	153604167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801
transcript_146254.known	chr4	+	1177	3	FSM	ENSG00000137462.9	ENST00000646900.1	1177	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTCATTGATTAAAAAG	6659	False	NA	NA	False	NA	NA	NA	153684069	153703646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153684361_153687916_153688048_153702891
transcript_146259.nnic	chr4	-	1267	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-206	0	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	26.1369257734893	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTTAACTCATG	NA	False	NA	NA	False	AATAAA	-34	NA	153760230	153710159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153751437_153751476_153759796
transcript_146261.nnic	chr4	-	1317	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-206	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	24.5249306262469	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGCTGTTTCTTAACTC	NA	False	NA	NA	False	AATAAA	-31	NA	153760230	153710162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_153710490_153715528_153715663_153720183_153720305_153723350_153723459_153728206_153728362_153751437_153751476_153759796
transcript_146263.nnic	chr4	-	1162	6	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-206	-3	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	18.4997297277555	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGCTGTTTCTTAACTC	NA	False	NA	NA	False	AATAAA	-31	NA	153760230	153710162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_153710490_153715528_153715663_153720183_153720305_153723350_153723459_153751437_153751476_153759796
transcript_146265.known	chr4	-	1996	3	FSM	ENSG00000145423.5	ENST00000274063.5	1996	3	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	10.5	855	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTCTTCTGTCTTGT	-9	True	NA	-3	True	TATAAA	-22	NA	153789083	153780590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_153781756_153785863_153785945_153788333
transcript_146270.known	chr4	-	3317	15	FSM	ENSG00000171566.12	ENST00000499023.7	3317	15	0	0	0	0	multi-exon	TRUE	canonical	3	491	junction_4	57.9583330276755	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATTCCTGAGAGAT	8	True	NA	-8	True	AATAAA	-16	NA	154550400	154535004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547010_154547065_154547710_154547854_154548828_154548936_154550299
transcript_146271.known	chr4	-	1673	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	153.884929179473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGATATCCAGTCATTT	11	True	NA	-6	True	ATTAAA	-21	NA	154550397	154536618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
transcript_146285.known	chr4	-	998	7	FSM	ENSG00000171566.12	ENST00000506627.5	998	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	216.431218224687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCCCTACCCCTGTGT	9472	False	NA	-12	True	AATAAA	-7	NA	154540936	154536520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538083_154539104_154539214_154539950_154540054_154540593_154540696_154540784
transcript_146286.known	chr4	-	2209	5	FSM	ENSG00000171560.17	ENST00000403106.8	2209	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTGAAACTCTATTTG	1	True	NA	-15	True	AATAAA	-24	NA	154590742	154585274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_154586919_154587511_154587658_154588792_154588977_154589436_154589563_154590633
transcript_146287.known	chr4	+	4901	3	FSM	ENSG00000121207.12	ENST00000336356.4	4901	3	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	85.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTCTTTAAATTTTAAA	0	True	NA	9	True	AATAAA	-18	NA	154743999	154753120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_154744223_154744325_154744867_154748983
transcript_146290.known	chr4	+	5002	2	FSM	ENSG00000121207.12	ENST00000510733.1	5002	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTCTTTAAATTTTA	0	True	NA	7	True	AATAAA	-16	NA	154743999	154753118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_154744867_154748983
transcript_146298.known	chr4	-	7328	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	14.8813850599255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCCTTTTTATGTTT	-10	True	NA	-37	True	AATAAA	-20	NA	155376965	155342657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_146305.known	chr4	-	1644	11	FSM	ENSG00000164114.19	ENST00000433024.5	1644	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	15.6384142418597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCTTGAAGAAAAA	-4	True	NA	NA	False	AAGAAA	-25	NA	155376885	155353252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_146316.nic	chr4	-	935	4	NIC	ENSG00000164114.19	novel	728	4	NA	NA	3	-185	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	29.3295452099452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTAAACCCAGAATT	10	True	NA	NA	False	AATAAA	-3	NA	155376810	155373180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_155373457_155374936_155375022_155375775_155375915_155376375
transcript_146317.known	chr4	-	728	4	FSM	ENSG00000164114.19	ENST00000481250.1	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	17.9691092959247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAACTTCAATTTTAC	7	True	NA	NA	False	AAAAAG	-37	NA	155376813	155372995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155373457_155374936_155375022_155375775_155375915_155376770
transcript_146319.known	chr4	+	3382	14	FSM	ENSG00000061918.14	ENST00000264424.13	3382	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	6.37116284333805	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTCATCAGCTTA	-25	True	NA	NA	False	AATAAA	-31	NA	155759020	155807811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802341_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_146321.known	chr4	-	2903	8	FSM	ENSG00000256043.5	ENST00000433477.4	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.12297745058317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCTTAAGTGTATGGC	20	True	NA	1	True	AATAAA	-33	NA	155953866	155924117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155926071_155928335_155928429_155929541_155929706_155937361_155937484_155939370_155939539_155942316_155942457_155943155_155943265_155953712
transcript_146322.known	chr4	-	2505	8	FSM	ENSG00000256043.5	ENST00000678374.1	2505	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	9.45666809339164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAGTAGCAACCACTAA	-24	True	NA	NA	False	AATGAA	-7	NA	155953910	155924554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155926071_155928335_155928429_155929541_155929706_155937361_155937484_155939370_155939539_155942316_155942457_155943155_155943260_155953712
transcript_146323.known	chr4	-	4570	6	FSM	ENSG00000145431.11	ENST00000502773.6	4570	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	3.42928563989645	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCAGGTGTTCATGTCT	4	True	NA	NA	False	AATAAA	-19	NA	156971799	156760453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_156763207_156767772_156767991_156772685_156772894_156810836_156811018_156850220_156850417_156970785
transcript_146325.known	chr4	+	3210	13	FSM	ENSG00000164124.11	ENST00000296529.11	3210	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	5.22547180219696	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTATTACCTCTATA	-1	True	NA	NA	False	AGTAAA	-26	NA	158210485	158255416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158210587_158211452_158211575_158212607_158212777_158215190_158215314_158217320_158217421_158219309_158219391_158232900_158232983_158235437_158235506_158237524_158237644_158240298_158240419_158241508_158241607_158244295_158244350_158253443
transcript_146328.known	chr4	+	4614	14	FSM	ENSG00000171503.13	ENST00000684627.1	4614	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.9152844098156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGTCTATTTTAAAAAAT	-40	True	NA	NA	False	TATAAA	-4	NA	158672275	158710718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158672491_158679289_158679678_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_146330.known	chr4	+	3111	13	FSM	ENSG00000171503.13	ENST00000511912.6	3111	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	11.1080551353011	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAGGTGTCAAAAGAA	-20	True	NA	NA	False	NA	NA	NA	158672295	158709623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158672491_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_146331.known	chr4	+	1903	12	FSM	ENSG00000171503.13	ENST00000307738.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.8177647996158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTCTGCATATTACT	23	True	NA	-63	True	NA	NA	NA	158672338	158708599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158672491_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_146332.known	chr4	-	1830	10	FSM	ENSG00000171497.5	ENST00000307720.4	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_5	57.7850422783536	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTCCTTCGATTCTT	-3	True	NA	-5	True	AATAAA	-23	NA	158723396	158709126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_158709825_158710627_158710671_158710761_158710849_158713118_158713261_158715296_158715404_158715561_158715685_158717011_158717201_158719179_158719287_158721342_158721484_158723203
transcript_146334.known	chr4	+	987	2	FSM	ENSG00000171503.13	ENST00000510353.5	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAGA	0	True	NA	24	True	NA	NA	NA	158672315	158680101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158672491_158679289
transcript_146336.known	chr4	+	3011	2	FSM	ENSG00000171503.13	ENST00000682409.1	3011	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACTTGCAAAGATCAAAAA	32	True	NA	-61	True	NA	NA	NA	158672347	158683334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158672491_158680466
transcript_146338.known	chr4	-	3358	2	FSM	ENSG00000205208.5	ENST00000508457.1	3358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTAATCTGTCTTTTG	-17	True	NA	-11	True	AATAAA	-15	NA	158671892	158666683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_158669765_158671615
transcript_146339.known	chr4	-	1103	2	FSM	ENSG00000205208.5	ENST00000508836.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTTTTTGTACTTG	NA	False	NA	NA	False	AATATA	-3	NA	158672255	158668924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_158669769_158671996
transcript_146342.known	chr4	-	1876	8	FSM	ENSG00000145414.9	ENST00000274054.3	1876	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	37.2279245640546	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATTCATGCCTTCTC	-11	True	NA	-26	True	ATTAAA	-22	NA	163166890	163128668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_163129349_163133153_163133257_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
transcript_146345.known	chr4	-	1159	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	78.3212756677406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAACTTTTTGCTGTTCT	127	False	NA	-7	True	AATAAA	-9	NA	163166752	163156963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
transcript_146350.known	chr4	+	1890	4	FSM	ENSG00000164129.12	ENST00000338566.8	1890	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTACTTTTGTCCAAAA	-14	True	NA	NA	False	AGTAAA	-17	NA	163343891	163351934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163344001_163345713_163345754_163347451_163347523_163350264
transcript_146353.known	chr4	-	2762	3	FSM	ENSG00000164128.7	ENST00000296533.3	2762	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-1	True	NA	-2	True	ATTAAA	-27	NA	163332596	163323961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_163325759_163325855_163326706_163332481
transcript_146355.known	chr4	+	1749	7	FSM	ENSG00000198498.10	ENST00000358572.10	1749	7	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_2	64.9965811066671	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACAGTCCTAATTTT	25	True	NA	20	True	AATAAA	-20	NA	163494689	163520539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_146358.known	chr4	+	933	7	FSM	ENSG00000198498.10	ENST00000509657.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	306.022557265891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATCTGCAGAAGTTG	1180	False	NA	NA	False	AATAGA	-3	NA	163494441	163519720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163494560_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_146360.known	chr4	+	803	6	FSM	ENSG00000198498.10	ENST00000513272.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	345.144955055119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGATCTGCAGAAGTT	2	True	NA	NA	False	AATAGA	-2	NA	163494666	163519719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163517433_163517477_163519333
transcript_146362.nic	chr4	+	695	2	ISM	ENSG00000198498.10	ENST00000508268.1	608	6	-491	10420	-225	-8322	5prime_fragment	FALSE	canonical	3	1005	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTAAGTATCTTTTC	955	False	NA	NA	False	AAGAAA	-5	NA	163494216	163507139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_163494805_163507032
transcript_146365.known	chr4	+	674	4	FSM	ENSG00000248329.6	ENST00000510062.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	287.795065975774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGATGAATAAAACATC	8	False	NA	NA	False	AATAAA	-20	NA	164877241	164898965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_164877408_164878919_164879010_164896807_164896986_164898725
transcript_146366.known	chr4	+	2432	3	FSM	ENSG00000248329.6	ENST00000507152.6	2432	3	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_2	36.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGTCCTTACTTT	-7	True	NA	26	True	AATAAA	-18	NA	164877177	164897527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_164877408_164878919_164879010_164895415
transcript_146368.nnic	chr4	+	792	3	NIC	ENSG00000248329.6	novel	674	4	NA	NA	-232	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGATGAATAAAACATC	NA	False	NA	NA	False	AATAAA	-20	NA	164876945	164898965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_164877408_164878919_164879010_164898725
transcript_146370.nnic	chr4	+	2300	3	NNC	ENSG00000248329.6	novel	2432	3	NA	NA	-50	0	intron_retention	FALSE	canonical	3	42	junction_1	251.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGTCCTTACTTT	-6	True	NA	26	True	AATAAA	-18	NA	164877127	164897527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_164877226_164878919_164879010_164895415
transcript_146372.known	chr4	+	551	2	FSM	ENSG00000248329.6	ENST00000515275.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACAGCTATTTGGGGG	9	True	NA	NA	False	NA	NA	NA	164877193	164879256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_164877408_164878919
transcript_146373.known	chr4	-	2237	3	FSM	ENSG00000183439.9	ENST00000508856.2	2237	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	28.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAACATATATTACT	9	False	NA	NA	False	ATTAAA	-45	NA	164977668	164968373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_164970340_164976687_164976821_164977530
transcript_146378.known	chr4	+	2175	1	FSM	ENSG00000250486.5	ENST00000648094.1	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGCATTTTCTGTTTA	-2	True	NA	NA	False	ATTAAA	-17	NA	164956947	164959122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_164956900_164959100
transcript_146381.known	chr4	-	9953	6	FSM	ENSG00000170088.14	ENST00000306480.11	9953	6	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_2	5.03587132480567	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATAATCACTGCTAT	3	True	NA	-5	True	AATAAA	-17	NA	165112860	165070607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165112746
transcript_146387.known	chr4	+	3185	15	FSM	ENSG00000109466.14	ENST00000226725.11	3185	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	13.4952750612795	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACAGTGTTCTTG	0	True	NA	12	True	AATAAA	-14	NA	165207560	165323147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165207903_165219933_165220060_165228806_165228914_165238777_165238900_165263196_165263360_165294358_165294469_165297608_165297726_165299506_165299657_165305607_165305726_165310552_165310751_165311463_165311566_165313237_165313367_165314025_165314167_165317825_165317970_165322031
transcript_146389.known	chr4	+	2227	6	FSM	ENSG00000052802.13	ENST00000261507.11	2227	6	0	0	0	0	multi-exon	FALSE	canonical	3	1504	junction_1	75.5671886469253	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	-36	True	NA	17	True	AATAAA	-2	NA	165327668	165343164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_146392.nic	chr4	+	2202	6	NIC	ENSG00000052802.13	novel	2227	6	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	608.268493348127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	36	True	NA	-15	True	ATTAAA	-39	NA	165327740	165343029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_146396.known	chr4	+	1789	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	603.396791091898	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	-19	True	NA	-15	True	ATTAAA	-39	NA	165327685	165343029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_146402.known	chr4	+	2582	9	FSM	ENSG00000109472.14	ENST00000402744.9	2582	9	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_8	67.2416351675061	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGACACAAACTCTAA	-1	True	NA	119	True	TATAAA	-16	NA	165379007	165498547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165379529_165464389_165464587_165467687_165467856_165482241_165482360_165484421_165484605_165487437_165487578_165493170_165493271_165495558_165495678_165497511
transcript_146409.known	chr4	-	2986	12	FSM	ENSG00000196104.11	ENST00000357154.7	2986	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	16.2729812067541	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTGTTCCTCAATGGT	-3	True	NA	-2	True	AATAAA	-17	NA	167234587	166733383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_166735091_166737466_166737605_166741996_166742060_166754507_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167083237_167083247_167233984_167234174_167234449
transcript_146413.nnic	chr4	+	1856	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAACAAAGCCTCCAAGAAA	1	True	NA	NA	False	AATAAA	-1	NA	166716470	166744955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166725235_166725320_166743436
transcript_146417.known	chr4	+	2958	19	FSM	ENSG00000129116.19	ENST00000512127.5	2958	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	141.319629402008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATTAAAAAAAAAACA	6	True	NA	-16	True	NA	NA	NA	168631616	168926487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_168631901_168668189_168668369_168681331_168681399_168682997_168683104_168685484_168685560_168690602_168690745_168691268_168691293_168709027_168709148_168711580_168711924_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_146423.known	chr4	+	4392	12	FSM	ENSG00000129116.19	ENST00000507735.6	4392	12	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	23.0102384685636	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGTTTTAGTTTTCTG	NA	False	NA	5	True	AATAAA	-43	NA	168832027	168928445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_168832172_168877722_168878395_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_146428.nic	chr4	+	1698	11	NIC	ENSG00000129116.19	novel	4392	12	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	74.3892465346975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATTAAAAAAAAAACA	-4	True	NA	-16	True	NA	NA	NA	168832091	168926487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_168832172_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_14643.known	chr1	+	1417	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	891.714393738264	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	-29	True	NA	13	True	AATAAA	-16	NA	155308865	155320665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_146430.nic	chr4	+	2021	10	ISM	ENSG00000129116.19	ENST00000507735.6	4392	12	-29	4058	-6	-1006	5prime_fragment	FALSE	canonical	3	249	junction_1	22.1309235635971	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCACTCACTCACAGCA	NA	False	NA	NA	False	AAGAAA	-6	NA	168831998	168924387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_168832172_168877722_168878395_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254
transcript_146441.nnic	chr4	-	1176	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-40	-2408	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	70.0325638542528	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATGTGTGACAAATTG	4020	False	NA	-14	True	TATAAA	-15	NA	169010315	168989997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_146444.known	chr4	-	3440	5	FSM	ENSG00000145439.12	ENST00000306193.8	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	40.9298179815156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTAATTTTAT	8	True	NA	-5	True	AATAAA	-19	NA	169010255	168987589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_168990329_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_146449.known	chr4	-	1052	5	FSM	ENSG00000145439.12	ENST00000504561.1	1052	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	118.501054847626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGACCCAAACACCTCC	4255	False	NA	NA	False	NA	NA	NA	169010080	169001574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169002206_169005884_169005915_169006754_169006892_169007635_169007757_169009947
transcript_146452.known	chr4	-	1602	4	FSM	ENSG00000145439.12	ENST00000504480.5	1602	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	4.96655480858378	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	9	True	NA	NA	False	NA	NA	NA	169010254	169001168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169002206_169006754_169006892_169007635_169007757_169009947
transcript_146453.known	chr4	-	5120	12	FSM	ENSG00000154447.15	ENST00000284637.14	5120	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	12.4774176179698	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTTGTGTCAGT	-4	True	NA	-3	True	ATTAAA	-19	NA	169270956	169094258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169096688_169106846_169107206_169116268_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_146458.nic	chr4	-	2834	10	ISM	ENSG00000154447.15	ENST00000284637.14	5120	12	-502	22010	-502	0	5prime_fragment	FALSE	canonical	3	104	junction_7	11.8133634311129	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACCATACTTACTTAC	NA	False	NA	2	True	NA	NA	NA	169271458	169116268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_14646.known	chr1	+	1478	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	894.955105019241	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	21	True	NA	13	True	AATAAA	-16	NA	155308915	155320665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_146465.known	chr4	+	6635	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_12	15.7788536409405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAGTAGATCATTTAT	15	True	NA	NA	False	AGTAAA	-17	NA	169620577	169723673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
transcript_146468.known	chr4	+	3635	14	FSM	ENSG00000109572.15	ENST00000347613.8	3635	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	34.2662737220273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCTCTCTACTGAG	8	False	NA	NA	False	NA	NA	NA	169620525	169720545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169717791_169717868_169719906
transcript_146471.known	chr4	-	1216	8	FSM	ENSG00000056050.7	ENST00000393381.3	1216	8	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_4	67.2175875915869	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	20	False	169757964	-9	True	AATAAA	-18	NA	169757944	169729469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_146472.nnic	chr4	-	1173	7	NIC	ENSG00000056050.7	novel	1216	8	NA	NA	-56	0	combination_of_known_splicesites	TRUE	canonical	3	41	junction_4	248.272028227104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	NA	False	NA	-9	True	AATAAA	-18	NA	169758000	169729469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169750535_169750726_169753675_169753836_169757829
transcript_146474.nic	chr4	-	639	5	ISM	ENSG00000056050.7	ENST00000393381.3	1216	8	-56	12619	-56	8383	5prime_fragment	FALSE	canonical	3	528	junction_1	73.085566290479	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAGAGAAATAACGGATAA	NA	False	NA	NA	False	NA	NA	NA	169758000	169742088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_146475.nic	chr4	-	620	4	ISM	ENSG00000056050.7	ENST00000393381.3	1216	8	-56	19274	-56	1728	5prime_fragment	FALSE	canonical	3	675	junction_3	19.94993734326	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATATTTTAATTTAT	NA	False	NA	NA	False	NA	NA	NA	169758000	169748743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_169748843_169750535_169750726_169753675_169753836_169757829
transcript_146476.known	chr4	-	489	3	FSM	ENSG00000056050.7	ENST00000506125.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTAGCCTCACCCAAGG	8	True	NA	NA	False	GATAAA	-7	NA	169757904	169750471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169750726_169753675_169753836_169757829
transcript_146481.known	chr4	-	2101	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	31.64185678167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATACCTAAAGGCATCA	-7	True	NA	-14	True	AATAAA	-12	NA	170090221	170060228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_146482.known	chr4	-	2250	13	FSM	ENSG00000109576.14	ENST00000337664.9	2250	13	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_9	26.1006332405089	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	8	True	NA	-7	True	AATAAA	-19	NA	170089956	170060221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_146488.nnic	chr4	-	794	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	23	-2038	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	56.6413276680552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTTTTTCTCAATGA	1423	False	NA	-19	True	AATAAA	-13	NA	170090273	170075287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_146489.nnic	chr4	-	1118	5	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	24	-2038	intron_retention	FALSE	canonical	3	39	junction_1	52.0210294015795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTTTTTCTCAATGA	24	True	NA	-19	True	AATAAA	-13	NA	170090190	170075287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_146490.known	chr4	-	810	6	FSM	ENSG00000109576.14	ENST00000507375.5	810	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	59.6925455982571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACGCAAAAAGGAAATCT	1400	False	NA	NA	False	NA	NA	NA	170090296	170073160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090161
transcript_146492.known	chr4	+	1569	4	FSM	ENSG00000250266.3	ENST00000654867.1	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	172.541782379419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	-3	True	NA	NA	False	AATAAA	-23	NA	170226587	170283723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_170226784_170273658_170273965_170276581_170276676_170282750
transcript_146493.known	chr4	+	1316	3	FSM	ENSG00000250266.3	ENST00000667527.2	2474	3	0	1158	0	0	multi-exon	FALSE	canonical	3	391	junction_2	13.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170226534	170283723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_170226784_170276581_170276676_170282750
transcript_146499.known	chr4	+	4249	12	FSM	ENSG00000109586.12	ENST00000265000.9	4249	12	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_5	65.5047787039835	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	-1	True	NA	18	True	AATAAA	-19	NA	173168810	173323967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173298114_173298298_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_1465.nic	chr1	-	921	7	ISM	ENSG00000008128.23	ENST00000460465.5	2333	20	-93	6637	-60	-4910	5prime_fragment	FALSE	canonical	3	22	junction_3	31.6723679078292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	121	False	NA	NA	False	NA	NA	NA	1724417	1709517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_146512.nic	chr4	+	349	2	ISM	ENSG00000109586.12	ENST00000512285.5	1567	6	-46	50240	-46	-47629	5prime_fragment	FALSE	canonical	3	637	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAGAGCACCATGCTG	295	False	NA	NA	False	AATAAA	-13	NA	173168764	173248131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_173168962_173247979
transcript_146516.known	chr4	-	1175	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	1007.36745406033	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-1	True	NA	-17	True	AATAAA	-14	NA	173334391	173331700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
transcript_146517.known	chr4	-	1441	5	FSM	ENSG00000164104.12	ENST00000296503.10	1441	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1069.70238267473	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATACACATATAT	-4	True	NA	NA	False	NA	NA	NA	173334358	173331375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334271
transcript_146528.nic	chr4	-	651	4	ISM	ENSG00000164104.12	ENST00000296503.10	1441	5	-89	1461	-15	52	5prime_fragment	FALSE	canonical	0	0	junction_3	1170.49305850142	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAATATGAAAAGGTAC	695	False	NA	-11	True	GATAAA	-33	NA	173334447	173332836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_173332996_173333068_173333215_173333499_173333670_173334271
transcript_14653.known	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	436.07086863162	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	-6	True	NA	-5	True	NA	NA	NA	155308888	155320647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_146532.known	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	710	False	NA	-21	True	AATAAA	-10	NA	173334432	173331704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173333215_173333499_173333670_173334271
transcript_146535.known	chr4	-	1026	3	FSM	ENSG00000272870.4	ENST00000609153.2	1026	3	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	1144	False	NA	-16	True	AATAAA	-13	NA	173370721	173363779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173364199_173369433_173369611_173370291
transcript_146536.known	chr4	-	587	2	FSM	ENSG00000272870.4	ENST00000608794.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTTGTTGCTATGC	-20	True	NA	NA	False	NA	NA	NA	173369815	173363993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173364199_173369433
transcript_146538.known	chr4	-	1980	6	FSM	ENSG00000164117.14	ENST00000393674.7	1980	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.44522215417857	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGCTTATATGTG	-14	True	NA	3	True	AATAAA	-28	NA	174283667	174236657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_174237600_174238993_174239191_174241099_174241219_174259698_174259826_174262763_174263101_174283409
transcript_146540.known	chr4	+	3824	14	FSM	ENSG00000164118.13	ENST00000396791.7	3824	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	37.083784874143	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTATTTCTCTGTTGA	-11	True	NA	NA	False	AATAAA	-20	NA	174283904	174332293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334_174318666_174318834_174319088_174331481
transcript_146542.known	chr4	-	2619	7	FSM	ENSG00000164120.14	ENST00000296522.11	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.95078331845327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTGTATTTTT	-1	True	NA	NA	False	ATTAAA	-21	NA	174522488	174490174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_146544.known	chr4	-	1171	6	FSM	ENSG00000164120.14	ENST00000296521.11	1171	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.65513337649941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTCTTAGAGTAGTAT	0	True	NA	NA	False	NA	NA	NA	174522487	174491457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_174492095_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_146546.known	chr4	-	2854	8	FSM	ENSG00000150625.17	ENST00000280187.11	2854	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	25.2214680179325	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATCTGTTTTT	114	False	NA	-2	True	AATAAA	-35	NA	176002332	175632933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_175635058_175640128_175640195_175640752_175640830_175651833_175651988_175673679_175673837_175701574_175701768_175812190_175812250_176002308
transcript_146551.nnic	chr4	+	4449	6	NNC	ENSG00000129128.13	novel	4569	5	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	209.017319856513	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCGTTGTGTTTCTAA	-21	True	NA	11	True	AATAAA	-14	NA	176319961	176332241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197_176331078_176331197
transcript_146552.known	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	25.1843205189261	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	-17	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
transcript_146557.known	chr4	+	589	4	FSM	ENSG00000129128.13	ENST00000513139.1	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	15.9234278833282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGAAAGAAGTATTTATG	19	True	NA	NA	False	AGTAAA	-11	NA	176320001	176327381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161
transcript_146559.known	chr4	-	2259	7	FSM	ENSG00000150630.4	ENST00000618562.2	2259	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.62995563967658	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTAAGTTCAGTCCATT	0	True	NA	NA	False	AATAAA	-19	NA	176792922	176683537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_176684041_176687186_176687521_176687820_176687928_176711498_176711651_176727777_176727969_176729532_176729747_176792164
transcript_14656.known	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	481.97359181793	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	-3	True	NA	-43	True	GGGGCT	-32	NA	155308793	155320609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_146562.known	chr4	+	2363	10	FSM	ENSG00000109674.4	ENST00000264596.4	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	11.2051575426477	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGTCTATTTTTAAA	-1	True	NA	NA	False	ATTAAA	-25	NA	177309873	177362936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379_177351550_177353307_177353729_177360502_177360678_177362288
transcript_146568.known	chr4	-	2037	9	FSM	ENSG00000038002.9	ENST00000264595.7	2037	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	9.98749217771909	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAATTTCAGCTGTTT	3	True	NA	-4	True	AATAAA	-22	NA	177442437	177430773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_177431809_177433213_177433348_177434381_177434490_177436275_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_146573.known	chr4	-	2260	4	FSM	ENSG00000177822.9	ENST00000315302.6	2260	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	7.40870359029762	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAATACTCTAGAA	NA	False	NA	NA	False	NA	NA	NA	182144466	182141649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182143546_182143702_182143845_182144046_182144141_182144338
transcript_146582.known	chr4	+	1237	4	FSM	ENSG00000218336.9	ENST00000513201.1	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	21.9241115365405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAACTTTTCACCAGC	24	False	NA	NA	False	AAAACA	-24	NA	182143986	182350316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_182144162_182323945_182324253_182346650_182346930_182349840
transcript_146584.nic	chr4	+	2053	2	ISM	ENSG00000218336.9	ENST00000513201.1	1237	4	-55	24548	-55	-21161	5prime_fragment	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAACTCCACATTGTGGA	NA	False	NA	NA	False	AATAAA	-14	NA	182143931	182325768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_182144162_182323945
transcript_146593.known	chr4	-	794	7	FSM	ENSG00000129187.15	ENST00000510370.5	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	227.37371342254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTATCGTCTTCTAA	221	False	182917412	NA	False	NA	NA	NA	182917389	182891371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182917287
transcript_146597.known	chr4	-	1931	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_5	79.3332212884363	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-15	True	NA	-20	True	ATTAAA	-17	NA	182917379	182890103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
transcript_146598.known	chr4	-	1928	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	147.510541996157	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-22	True	NA	-7	True	ATTAAA	-30	NA	182917386	182890090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
transcript_14660.known	chr1	+	1198	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	649.315365938959	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	75	False	NA	-15	True	NA	NA	NA	155308969	155320637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_146601.known	chr4	-	1829	5	FSM	ENSG00000129187.15	ENST00000500813.6	1829	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	196.923843147548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTCTGCTCCTGTCC	-5	True	NA	-19	True	NA	NA	NA	182917369	182890059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917287
transcript_146603.known	chr4	-	2183	1	FSM	ENSG00000251359.4	ENST00000578387.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACACTTTGCTGCTGCC	NA	False	NA	NA	False	ATTAAA	-16	NA	183099199	183097016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183097000_183099200
transcript_146606.known	chr4	+	8862	23	FSM	ENSG00000151718.16	ENST00000403733.8	8862	23	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_9	45.7540135077363	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTACACCTTAACTCA	-13	True	NA	26	True	AATAAA	-17	NA	183099256	183320777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775_183280898_183282707_183282907_183284225_183284391_183285966_183286060_183289392_183289636_183312340_183312469_183315662
transcript_146612.known	chr4	+	6356	23	FSM	ENSG00000151718.16	ENST00000448232.6	6356	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_17	96.1058838422024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGTTTCTGCACTTT	222	False	NA	5	True	AATACA	-10	NA	183099491	183318434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775_183280970_183282707_183282907_183284225_183284391_183285966_183286060_183289392_183289636_183312340_183312469_183315662
transcript_146622.nic	chr4	+	2994	17	ISM	ENSG00000151718.16	ENST00000448232.6	6356	23	-363	37590	-128	-542	5prime_fragment	FALSE	canonical	3	339	junction_9	34.6031067969337	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAATCAGG	-10	True	NA	13	True	NA	NA	NA	183099128	183280844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775
transcript_146628.nic	chr4	+	1095	6	ISM	ENSG00000151718.16	ENST00000513834.5	4887	23	-363	71639	-128	0	5prime_fragment	FALSE	canonical	3	360	junction_2	26.8730348118704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATTATAAAACATTTTG	-10	True	NA	NA	False	AAAAAG	-21	NA	183099128	183245545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415
transcript_14663.nnic	chr1	+	1327	10	NIC	ENSG00000160752.15	novel	1478	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	99	junction_1	702.720761850539	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	-5	True	NA	13	True	AATAAA	-16	NA	155308889	155320665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155309077_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_146632.known	chr4	+	2646	3	FSM	ENSG00000168564.6	ENST00000302350.4	2646	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	29.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTTTTTCTCCAA	-1	True	NA	20	True	ATTAAA	-30	NA	183444634	183448198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183445070_183445534_183445635_183446087
transcript_146633.known	chr4	+	3542	3	FSM	ENSG00000168564.6	ENST00000504169.2	3542	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	30	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGGTTTGGTAATTTC	0	True	NA	NA	False	AATAAA	-19	NA	183444635	183449064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183445070_183445534_183445666_183446087
transcript_146634.known	chr4	+	2458	2	FSM	ENSG00000168556.7	ENST00000302327.4	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTCCTTCATTCT	-3	True	NA	NA	False	NA	NA	NA	183505057	183512429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183505368_183510281
transcript_146637.known	chr4	+	599	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAATCCAAGTC	1021	False	NA	NA	False	NA	NA	NA	183506081	183510643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183506319_183510281
transcript_146639.known	chr4	-	1620	8	FSM	ENSG00000182552.15	ENST00000510702.5	1620	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	75.1963416391939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATTTATCTGCTGTTG	9	True	NA	NA	False	AATAAA	-1	NA	183659201	183640627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651324_183655880_183655962_183658928
transcript_146641.known	chr4	-	2590	7	FSM	ENSG00000182552.15	ENST00000327570.13	2590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.3994645226066	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACACATTTTATT	1	True	NA	-1	True	AATAAA	-20	NA	183659178	183639635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
transcript_146645.known	chr4	-	805	7	FSM	ENSG00000182552.15	ENST00000514322.1	805	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	71.987074457078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACAATTTTTTGTAT	7	True	NA	-64	True	NA	NA	NA	183659203	183641338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183655880_183655962_183658928
transcript_146648.known	chr4	-	1551	6	FSM	ENSG00000182552.15	ENST00000510968.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.574047569033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGCTGAACTGTTA	59	False	NA	NA	False	NA	NA	NA	183659151	183640459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183658928
transcript_14665.known	chr1	+	3436	10	FSM	ENSG00000160753.16	ENST00000368352.10	3436	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	129.945287632056	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	-31	True	NA	24	True	AATAAA	-15	NA	155320893	155331114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_146650.nic	chr4	-	678	5	ISM	ENSG00000182552.15	ENST00000326397.10	2601	8	-10	9862	6	1783	5prime_fragment	FALSE	canonical	3	168	junction_1	9.44722181384559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAACTTTCAAAAGCCCA	15	False	183659210	NA	False	AATACA	-31	NA	183659195	183649496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
transcript_146654.known	chr4	+	4523	30	FSM	ENSG00000168538.16	ENST00000334690.11	4523	30	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_19	18.2479943679907	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	-17	True	NA	10	True	AATAAA	-16	NA	183659292	183713589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
transcript_146657.known	chr4	+	10507	4	FSM	ENSG00000173320.12	ENST00000308497.9	10507	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.09120616516523	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAAGTGGATTTTTTT	-11	True	NA	13	True	ATTAAA	-16	NA	183905306	184023526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183906957_184001324_184001478_184009157_184011424_184017088
transcript_146659.known	chr4	-	2257	9	FSM	ENSG00000168310.11	ENST00000393593.8	2257	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	8.02729717900116	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGGGCATCACTCC	-13	True	NA	-17	True	AATAAA	-22	NA	184474550	184387728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184389067_184390702_184390750_184398914_184399080_184408157_184408276_184418166_184418214_184418531_184418709_184419468_184419569_184428977_184429071_184474378
transcript_146666.known	chr4	-	2645	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	336.723225531363	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-2	True	NA	-2	True	AATATA	-19	NA	184649447	184627695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_146668.known	chr4	-	2540	7	FSM	ENSG00000164305.19	ENST00000523916.5	2540	7	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_3	86.1890686546476	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	NA	False	NA	-2	True	AATATA	-19	NA	184649509	184627695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_146669.known	chr4	-	677	6	FSM	ENSG00000164305.19	ENST00000393588.8	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	318.339190172998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGGCAACAGAATTTG	-10	False	NA	NA	False	NA	NA	NA	184649455	184629383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_14667.known	chr1	+	3114	10	FSM	ENSG00000160753.16	ENST00000368354.7	3114	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	145.052055364383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	-29	True	NA	22	True	AATAAA	-13	NA	155320895	155331112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_146671.known	chr4	+	2164	14	FSM	ENSG00000164306.11	ENST00000314970.11	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	10.6798488564976	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGAAATCGCCTTAT	-9	True	NA	5	True	ATTAAA	-19	NA	184649737	184694952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_184649909_184652022_184652101_184657081_184657321_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_146672.known	chr4	-	2494	13	FSM	ENSG00000151725.12	ENST00000281453.10	2494	13	0	0	0	0	multi-exon	FALSE	canonical	3	1165	junction_8	107.525061678145	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTGGATTGTATATTA	-14	True	NA	-4	True	ATTAAA	-15	NA	184734096	184694084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184695402_184697646_184697804_184700819_184700882_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_146676.known	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	386.634386417363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	0	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_146688.nic	chr4	-	385	4	ISM	ENSG00000151725.12	ENST00000510146.5	1549	12	-1	29959	-1	-8564	5prime_fragment	FALSE	canonical	3	1417	junction_3	55.7215298505783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTACTGGTGTATTTCA	-1	True	NA	NA	False	NA	NA	NA	184734131	184724960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_184725063_184728917_184729036_184730919_184730969_184734015
transcript_146689.nic	chr4	-	3851	21	NIC	ENSG00000151726.15	novel	3712	21	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_20	11.7536164647312	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTGAGGCATCTTTT	-17	True	NA	-9	True	AATAAA	-15	NA	184805724	184755600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184805526
transcript_146690.known	chr4	-	3712	21	FSM	ENSG00000151726.15	ENST00000281455.7	3712	21	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_20	10.2150624080326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCATCTTTTTTAATG	-1	True	NA	-3	True	AATAAA	-21	NA	184825968	184755594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184825915
transcript_146691.known	chr4	-	3636	20	FSM	ENSG00000151726.15	ENST00000454703.6	3636	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_19	15.5056954954553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCATCTTTTTTAATG	310	False	NA	-3	True	AATAAA	-21	NA	184826119	184755594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184825915
transcript_146692.known	chr4	-	2490	20	FSM	ENSG00000151726.15	ENST00000507295.5	2490	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	15.8793930820337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCTATCTCTGAGAT	395	False	NA	NA	False	TTTAAA	-37	NA	184826034	184756780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184783926_184783992_184788616_184788732_184803319_184803547_184825915
transcript_146698.known	chr4	+	4415	4	FSM	ENSG00000151729.11	ENST00000281456.11	4415	4	0	0	0	0	multi-exon	FALSE	canonical	3	1716	junction_3	60.8604962188118	615	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCACAAATTCTTT	0	True	NA	1	True	AATAAA	-14	NA	185143265	185150382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185143484_185144763_185145251_185145758_185145900_185146813
transcript_146704.known	chr4	-	4851	5	FSM	ENSG00000164323.15	ENST00000458385.7	4851	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	18.7266521300525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	-28	True	NA	-3	True	AATAAA	-15	NA	185204000	185159664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203897
transcript_146706.known	chr4	-	903	3	NNC	ENSG00000164323.15	novel	4851	5	NA	NA	35	-233	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	121	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGATCAAAAAGTGAAAA	7	True	NA	NA	False	NA	NA	NA	185203965	185190375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_185191048_185191049_185191213_185203897
transcript_146707.nic	chr4	-	1168	2	ISM	ENSG00000164323.15	ENST00000514798.1	2895	4	34	21229	6	-112	5prime_fragment	FALSE	canonical	3	96	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCCTGATGTCTCCTC	-22	True	NA	NA	False	AAAAAG	-12	NA	185203994	185190254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_185191213_185203784
transcript_146708.nic	chr4	-	1284	2	ISM	ENSG00000164323.15	ENST00000458385.7	4851	5	-223	30590	-195	-112	5prime_fragment	FALSE	canonical	3	242	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCCTGATGTCTCCTC	6427	False	NA	NA	False	AAAAAG	-12	NA	185204223	185190254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_185191213_185203897
transcript_146709.nic	chr4	-	1207	2	ISM	ENSG00000164323.15	ENST00000514798.1	2895	4	-113	21337	-113	-220	5prime_fragment	FALSE	canonical	3	96	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGAAAATTAAAAAGCAAGA	3	True	NA	NA	False	NA	NA	NA	185204141	185190362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_185191213_185203784
transcript_146712.known	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	22.1825633257854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	1	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_146715.known	chr4	-	2348	12	FSM	ENSG00000109775.11	ENST00000514247.5	2348	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	64.2965752336535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAACTTAAGTCTT	-14	True	NA	NA	False	CATAAA	-31	NA	185425979	185399539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418611_185418771_185422484_185422564_185425865
transcript_146717.known	chr4	-	1672	12	FSM	ENSG00000109775.11	ENST00000510755.5	1672	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	66.0740881432876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTAATTTTTCACATTA	-4	True	NA	-50	True	AATAAA	-5	NA	185425969	185400333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405960_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_146719.known	chr4	+	784	5	FSM	ENSG00000186352.9	ENST00000335174.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.33012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTCCGTGCAGTATT	-2	True	NA	12	True	ATTAAA	-16	NA	185396840	185400241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185396951_185397149_185397303_185398936_185399029_185399569_185399774_185400016
transcript_146722.known	chr4	+	1333	8	FSM	ENSG00000205129.9	ENST00000378850.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	4.23300925429402	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	2	True	NA	7	True	AATAAA	-17	NA	185426253	185449826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185426397_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_146723.known	chr4	-	2658	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	10.3708994574027	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGTATCCAAAATACAT	-1	True	NA	NA	False	AATAAA	-24	NA	185535507	185500659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_146726.known	chr4	-	2819	5	FSM	ENSG00000154553.16	ENST00000504011.5	2819	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	21.8460522749535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATAAGAGTGCCCCCA	146	False	NA	NA	False	NA	NA	NA	185535491	185512093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185514338_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_146727.known	chr4	+	394	2	FSM	ENSG00000249679.3	ENST00000512874.2	530	2	101	35	21	-35	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGGAAGCGACGGTGG	7	False	NA	7	True	ATTAAA	-15	NA	185471515	185472263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185471761_185472114
transcript_146745.known	chr4	+	2997	14	FSM	ENSG00000109794.14	ENST00000356371.9	2997	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	9.49929925786805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGGTGATGTCATCTT	350	False	NA	NA	False	ATTAAA	-5	NA	186105076	186172662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_186105643_186149172_186149284_186149565_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
transcript_146753.known	chr4	+	1990	13	FSM	ENSG00000109794.14	ENST00000502970.5	1990	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	12.7986544431653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAAACAAATAAATCA	-9	True	NA	-25	True	NA	NA	NA	186144862	186172110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_186145113_186149172_186149284_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
transcript_146762.nnic	chr4	+	1781	11	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8810	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.1875431034317	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	186242221	186258471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_186242367_186244748_186244807_186250242_186250403_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_146763.nnic	chr4	+	1812	11	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8810	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.1875431034317	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	186242221	186258471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_186242367_186244748_186244807_186250242_186250434_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_146765.nnic	chr4	+	1747	10	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8834	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.5230108301749	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	186242197	186258471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_186242367_186250242_186250403_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_146766.nnic	chr4	+	1778	10	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8834	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.5230108301749	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	186242197	186258471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_186242367_186250242_186250434_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_146777.nnic	chr4	-	592	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	540	junction_1	0	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247323	186241993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_186242333_186247070
transcript_146779.known	chr4	-	1289	2	FSM	ENSG00000168412.6	ENST00000307161.5	1289	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAAGGCCTCGCTCTTGA	NA	False	NA	NA	False	AAAAAG	-30	NA	186555567	186533654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_186534558_186555181
transcript_146783.known	chr4	-	14776	27	FSM	ENSG00000083857.15	ENST00000441802.7	14776	27	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_26	52.9756698648836	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCTTTATGCCTCTTT	-37	True	NA	-11	True	AATAAA	-15	NA	186723856	186587793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_186589221_186595688_186595827_186596539_186597172_186597681_186597793_186597971_186598126_186599897_186600361_186601268_186601427_186602902_186603035_186603175_186603978_186604376_186604575_186606069_186606214_186609182_186609321_186609800_186610016_186611385_186611776_186613108_186613343_186614190_186614345_186617004_186617202_186617707_186621776_186628153_186628365_186628487_186628764_186633683_186633824_186636024_186636236_186636584_186636915_186639721_186639784_186663298_186663614_186706562_186709846_186723663
transcript_146788.nnic	chr4	+	2426	4	NNC	ENSG00000179059.10	novel	2647	4	NA	NA	-68	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	329.339068775969	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAAGTCTGTATTTTA	1616	False	NA	42	True	ATTAAA	-20	NA	187995702	188005050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_187995841_187999608_187999686_188002712_188004238_188004364
transcript_146792.known	chr4	+	2647	4	FSM	ENSG00000179059.10	ENST00000326866.5	2647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	244.965303665642	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGCCAAGTCTGTAT	-6	True	NA	38	True	ATTAAA	-16	NA	187995770	188005046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_187995841_187999107_187999274_187999608_187999686_188002712
transcript_146794.known	chr4	+	2480	3	FSM	ENSG00000179059.10	ENST00000509524.5	2480	3	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	83.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	-6	True	NA	37	True	ATTAAA	-15	NA	187995770	188005045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_187995841_187999608_187999686_188002712
transcript_146797.nnic	chr4	+	2467	2	NIC	ENSG00000179059.10	novel	2647	4	NA	NA	-59	4	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAAGTCTGTATTTTA	1625	False	NA	42	True	ATTAAA	-20	NA	187995711	188005050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_187995841_188002712
transcript_146798.known	chr4	+	2338	1	FSM	ENSG00000179059.10	ENST00000618147.1	2338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	5456	False	NA	37	True	ATTAAA	-15	NA	188002707	188005045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_188002700_188005000
transcript_1468.nic	chr1	-	1048	7	ISM	ENSG00000008128.23	ENST00000358779.9	2419	20	-250	6637	-217	-4910	5prime_fragment	FALSE	canonical	3	24	junction_3	31.0523751104485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	NA	False	NA	NA	False	NA	NA	NA	1724574	1709517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_146801.nic	chr4	-	2039	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	30.8888725754048	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	NA	False	NA	-24	True	AATAAA	-14	NA	188109647	188091271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
transcript_146802.known	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	31.1985085985774	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	3	True	NA	-24	True	AATAAA	-14	NA	188109603	188091271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
transcript_146808.known	chr4	+	750	6	FSM	ENSG00000249378.7	ENST00000667271.1	750	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	9.74474217206387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGATAAGGTTTGATG	2	True	NA	7	True	ATTAAA	-20	NA	188455580	188601903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188601767
transcript_146809.known	chr4	+	468	5	FSM	ENSG00000249378.7	ENST00000510005.6	526	5	56	2	12	-2	multi-exon	FALSE	canonical	1	4	junction_4	11.2805141726785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGTTTGATGTGCTA	14	False	NA	12	True	ATTAAA	-25	NA	188455592	188601908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188601767
transcript_146810.known	chr4	+	1015	6	FSM	ENSG00000249378.7	ENST00000666759.1	1015	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.7144761887831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTATTCATTGATACGA	1338	False	NA	NA	False	AATAAA	-17	NA	188455553	188541508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188541134
transcript_146812.known	chr4	+	978	9	FSM	ENSG00000109536.12	ENST00000226798.9	978	9	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_8	47.4893080071715	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTACAGAGTTCTTGA	-34	True	NA	42	True	AATAAA	-15	NA	189940871	189963192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092
transcript_146813.nic	chr4	+	772	7	ISM	ENSG00000109536.12	ENST00000226798.9	978	9	-61	2409	-59	-393	5prime_fragment	FALSE	canonical	3	439	junction_5	43.9229122693637	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGACATTCCAGAAGAAGA	19	False	NA	NA	False	AAGAAA	-4	NA	189940810	189960783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747
transcript_146814.nic	chr4	+	736	6	ISM	ENSG00000109536.12	ENST00000514482.1	838	7	-213	3674	-59	0	5prime_fragment	FALSE	canonical	3	439	junction_5	25.9799923017695	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGATGACATTTTATAC	19	False	NA	NA	False	AGTAAA	-28	NA	189940810	189957502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397
transcript_146815.known	chr5	+	12612	20	FSM	ENSG00000153404.15	ENST00000637938.2	12591	20	-17	-4	-17	-2	multi-exon	FALSE	canonical	3	21	junction_13	83.9776384956913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTGTCCTTCGAGAT	-2	True	NA	16	True	CATAAA	-20	NA	92150	189970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772_156912_161782_161945_162721_163549_169339_169593_171042_171133_171213_171445_172896_173068_173917_174099_181513_181676_182003
transcript_146847.nic	chr5	+	3369	13	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-70	26659	-70	6197	5prime_fragment	FALSE	canonical	3	25	junction_12	71.5162666034021	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAAGAAAACGCAAAGT	NA	False	NA	NA	False	AAGAAA	-2	NA	92097	163307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772_156912_161782_161945_162721
transcript_146856.nnic	chr5	+	2913	12	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-38552	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	79.8761437921701	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	NA	False	NA	18	True	AATAAA	-29	NA	53615	157110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_53766_89997_90120_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_14686.known	chr1	+	1196	9	FSM	ENSG00000160752.15	ENST00000611010.4	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	761.648376877414	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTCTGTTCTTGCTC	3936	False	NA	14	True	AATAAA	-17	NA	155308747	155320666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_146880.nnic	chr5	+	2822	11	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-38583	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	66.9947012830119	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	NA	False	NA	18	True	AATAAA	-29	NA	53584	157110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_53766_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_146897.nic	chr5	+	2932	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-182	32856	-182	0	5prime_fragment	FALSE	canonical	3	161	junction_3	33.1246132052889	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	NA	False	NA	18	True	AATAAA	-29	NA	91985	157110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_146906.nnic	chr5	+	2809	11	NNC	ENSG00000153404.15	novel	12591	20	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	63.7762494977558	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	NA	False	NA	18	True	AATAAA	-29	NA	91985	157110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_92277_113250_113449_139605_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_146944.known	chr5	+	1360	9	FSM	ENSG00000153404.15	ENST00000502646.1	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	34.9812449749862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	109	False	NA	18	True	AATAAA	-29	NA	140565	157110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_146945.known	chr5	-	9283	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	20.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTACTTCTTTT	-4	True	NA	NA	False	NA	NA	NA	218153	196867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_205959_216728_216860_218092
transcript_146950.known	chr5	+	2693	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	49.6243028018674	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	-2	True	NA	NA	False	NA	NA	NA	218319	257082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_146959.known	chr5	+	2148	14	FSM	ENSG00000073578.18	ENST00000510361.5	2148	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	142.908792860772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTCTTTTATTTCCAA	-4	True	NA	NA	False	AATAAA	-13	NA	218317	256679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_146962.known	chr5	+	2067	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_11	136.606770411361	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	0	True	NA	NA	False	AATAAA	-16	NA	218302	256682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
transcript_146974.known	chr5	+	3665	24	FSM	ENSG00000286001.1	ENST00000651543.1	3665	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	276.369448082903	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATGTTAGACGTGTG	NA	False	NA	5	True	AAAAAG	-41	NA	218297	314955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333_256456_263700_263815_264322_264386_270734_270855_271410_271822_272710_272773_304176_304222_306601_306761_311292_311403_313700_313851_314416
transcript_146976.known	chr5	+	1088	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	262.262921511982	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	-5	True	NA	19	True	AATAAA	-13	NA	271656	314969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
transcript_146979.known	chr5	+	3500	5	FSM	ENSG00000249915.9	ENST00000513582.5	3500	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	285.389645922903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	1	True	NA	19	True	AATAAA	-13	NA	271624	314969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_304176_306755_311292_311403_314416
transcript_146980.known	chr5	+	1073	5	NIC	ENSG00000249915.9	novel	1050	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	297.619303809414	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-3	True	NA	24	True	AATAAA	-18	NA	271620	314974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
transcript_146982.known	chr5	+	672	4	FSM	ENSG00000249915.9	ENST00000505221.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	361.36254494467	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCTGGTTCTATA	-15	True	NA	1	True	NA	NA	NA	271646	314806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_304176_304222_314416
transcript_146983.known	chr5	+	931	4	FSM	ENSG00000249915.9	ENST00000618970.4	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	347.39059029027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-3	True	NA	24	True	AATAAA	-18	NA	271620	314974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_311292_311403_314416
transcript_146986.known	chr5	+	1156	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-5	True	NA	13	True	AATAAA	-14	NA	271656	276940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_276011
transcript_146987.known	chr5	-	522	2	FSM	ENSG00000248925.2	ENST00000512642.2	1075	2	0	553	0	-553	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGTCTCTTCATAAAGT	NA	False	NA	NA	False	NA	NA	NA	271516	269857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_270208_271344
transcript_146993.known	chr5	+	2801	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	31.1884950297738	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	-7	True	NA	11	True	ATTAAA	-24	NA	443175	467290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_147000.nnic	chr5	+	2775	13	NNC	ENSG00000180104.16	novel	2801	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.6190028915539	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	2	True	NA	11	True	ATTAAA	-24	NA	443160	467290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_443250_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_147009.nnic	chr5	+	2430	10	NNC	ENSG00000180104.16	novel	2801	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.2661772782991	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	2	True	NA	11	True	ATTAAA	-24	NA	443160	467290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_443250_446149_446350_447532_447753_453369_454052_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_14701.known	chr1	+	2503	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	86.1560176366109	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	12	True	NA	24	True	AATAAA	-15	NA	155323936	155331114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_147046.nnic	chr5	+	2360	7	NNC	ENSG00000225138.8	novel	1357	7	NA	NA	-26	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	28.5754362268637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGACAAACTCTTTTTT	-48	True	NA	18	True	AATAAA	-19	NA	473209	480881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_474047_475136_475320_476444_476564_477243_477466_477805_477850_479781_480217_480361
transcript_147051.known	chr5	+	1357	7	FSM	ENSG00000225138.8	ENST00000607286.5	1357	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.2283519073915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGGTGCAGCCGCCAG	-22	True	NA	NA	False	NA	NA	NA	473235	480467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_473400_475136_475320_476231_476564_477243_477337_477805_477850_479781_480217_480361
transcript_147087.known	chr5	-	1876	2	FSM	ENSG00000188242.4	ENST00000342584.3	1876	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTGCAAACTTTGTT	-23	True	NA	0	True	ATTAAA	-15	NA	473098	470509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_471966_472678
transcript_147089.known	chr5	+	2762	1	FSM	ENSG00000225138.8	ENST00000534918.1	2762	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAACTCTTTTTTTTA	4865	False	NA	21	True	AATAAA	-22	NA	478122	480884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_478100_480900
transcript_147090.known	chr5	+	2682	12	FSM	ENSG00000180104.16	ENST00000315013.9	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_6	24.0794140671691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	-3	True	NA	6	True	ATTAAA	-19	NA	446148	467285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_147096.known	chr5	+	2366	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	15.0453858828425	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	-6	True	NA	17	True	AATAAA	-21	NA	612339	653553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
transcript_1471.known	chr1	-	2078	7	FSM	ENSG00000215790.8	ENST00000647043.1	2078	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	66.6418703885845	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCCCTGCTTTGTTT	151	False	NA	NA	False	AATAAA	-22	NA	1745919	1724837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1725423_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
transcript_147105.known	chr5	-	2665	16	FSM	ENSG00000028310.18	ENST00000467963.6	2665	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	65.3531942601125	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-2	True	NA	-20	True	CATAAA	-17	NA	892801	863740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
transcript_147111.nic	chr5	-	405	2	ISM	ENSG00000028310.18	ENST00000467963.6	2665	16	-58	27963	-58	-2661	5prime_fragment	FALSE	canonical	3	195	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGAAGTCCG	NA	False	NA	-60	True	AAGAAA	-8	NA	892859	891703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_891855_892605
transcript_147112.known	chr5	+	2431	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	30.7411911502032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTGATTTATGGT	-4	True	NA	88	True	ACTAAA	-23	NA	892883	918120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
transcript_147113.known	chr5	+	1452	9	FSM	ENSG00000071539.14	ENST00000512024.5	1452	9	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	37.0790961998806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGACAGAGCAAGACTCC	-4	True	NA	NA	False	NA	NA	NA	892883	908932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354
transcript_147115.known	chr5	+	1940	11	FSM	ENSG00000145506.14	ENST00000274150.4	1940	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	7.73369252039412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCTGGAGTGCGCAA	149	False	NA	19	True	CATAAA	-20	NA	1008961	1038682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037519_1037699_1037804
transcript_147118.known	chr5	+	2182	10	FSM	ENSG00000145506.14	ENST00000296849.10	2182	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	4.29469957557504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTAGGGAGTGCAGACC	-1	True	NA	NA	False	NA	NA	NA	1008801	1038943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037804
transcript_147126.known	chr5	-	5300	24	FSM	ENSG00000113504.21	ENST00000264930.10	5300	24	0	0	0	0	multi-exon	TRUE	non_canonical	3	107	junction_17	17.7355068762861	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTTGAAGAATCTCTTG	0	True	NA	-11	True	AATAAA	-17	NA	1112063	1050383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078008_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
transcript_147141.nic	chr5	-	1223	3	ISM	ENSG00000113504.21	ENST00000264930.10	5300	24	-5	42345	-5	-14210	5prime_fragment	FALSE	canonical	3	148	junction_2	2	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCCACCGGAAGAAACCA	-5	True	NA	NA	False	AAAACA	-9	NA	1112068	1092728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_1093656_1094153_1094249_1111867
transcript_147143.known	chr5	-	4039	16	FSM	ENSG00000164362.21	ENST00000310581.10	4039	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_14	8.50098033562404	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-11	True	NA	-17	True	AGTAAA	-37	NA	1295068	1253166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1271118_1271205_1272184_1272281_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1293312_1294667_1294770
transcript_147152.known	chr5	-	3942	15	FSM	ENSG00000142319.18	ENST00000270349.12	3942	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31901323661567	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCAGCCTCCTTGTCT	-7	True	NA	NA	False	AATAAA	-21	NA	1445440	1392793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1394759_1400914_1400987_1402921_1403090_1406187_1406289_1409025_1409126_1409720_1409850_1411242_1411356_1414690_1414816_1416097_1416202_1420568_1420704_1421875_1422015_1432463_1432699_1441358_1441491_1442911_1443243_1445347
transcript_147160.known	chr5	-	3945	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_2	75.8339824841626	1111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGTTTTGTGTGGTT	-14	True	NA	-4	True	AGTAAA	-23	NA	1523960	1461426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
transcript_147168.known	chr5	-	736	3	FSM	ENSG00000185986.13	ENST00000436493.2	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCAGTCTCTGCTAGT	71	False	NA	NA	False	NA	NA	NA	1594620	1589027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1589366_1593112_1593285_1594394
transcript_147177.nnic	chr5	-	2871	6	NNC	ENSG00000188002.11	novel	835	5	NA	NA	-6	2852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.1328516352501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	-10	True	NA	NA	False	NA	NA	NA	1634015	1596067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_1597961_1598807_1599270_1599626_1599828_1602690_1602736_1632844_1632907_1633807
transcript_147184.nic	chr5	-	866	5	FSM	ENSG00000188002.11	ENST00000692393.1	835	5	-31	0	-6	0	multi-exon	FALSE	canonical	3	39	junction_1	39.8395218344799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	-10	True	NA	2	True	ATTAAA	-20	NA	1634015	1598919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1599270_1599626_1599828_1602690_1602736_1632844_1632907_1633807
transcript_147185.known	chr5	-	1009	4	FSM	ENSG00000188002.11	ENST00000507505.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	39.9360600070774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAAACTCACTCCTC	3	True	NA	NA	False	NA	NA	NA	1634002	1599120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1599828_1602690_1602736_1632844_1632907_1633807
transcript_147194.nic	chr5	-	1586	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	-6	4	-6	0	multi-exon	FALSE	canonical	3	28	junction_1	56.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	-10	True	NA	-5	True	TTTAAA	-41	NA	1634015	1628515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_147195.nnic	chr5	-	1385	3	FSM	ENSG00000188002.11	ENST00000689007.1	1381	3	-9	5	-6	0	multi-exon	FALSE	canonical	3	29	junction_1	56	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	-10	True	NA	-5	True	TTTAAA	-41	NA	1634015	1628515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632844_1632907_1633807
transcript_147196.nic	chr5	-	1404	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	-6	186	-6	2	multi-exon	FALSE	canonical	3	28	junction_1	56.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-10	True	NA	-13	True	AATAAA	-14	NA	1634015	1628697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_147198.known	chr5	+	3024	1	FSM	ENSG00000260066.1	ENST00000565428.1	3024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAGGTTCCCAACATTC	NA	False	NA	NA	False	AATAAA	-16	NA	1725148	1728172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1725100_1728200
transcript_147199.known	chr5	-	609	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-5	True	NA	-9	True	ATTAAA	-17	NA	1799837	1798384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1799791
transcript_147200.known	chr5	-	686	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTAGTTCATTCATTCT	1764	False	NA	-11	True	ATTAAA	-15	NA	1799895	1798386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1799770
transcript_147201.known	chr5	-	587	2	FSM	ENSG00000171421.13	ENST00000382647.7	587	2	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTAGTTCATTCAT	-6	True	NA	-14	True	ATTAAA	-12	NA	1799838	1798389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1799809
transcript_147202.known	chr5	-	595	2	FSM	ENSG00000171421.13	ENST00000505818.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGTTCATTCATTCTC	293	False	NA	-10	True	ATTAAA	-16	NA	1801366	1798385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1801333
transcript_147212.known	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2761	junction_3	121.658903861941	1171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1	True	NA	30	True	AATAAA	-22	NA	1801406	1816048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
transcript_147217.known	chr5	-	2538	6	FSM	ENSG00000113430.10	ENST00000505790.5	2538	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1.6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAACCGAGTGATGGT	NA	False	NA	-21	True	AATATA	-8	NA	1887218	1877447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602_1882748_1886861
transcript_147218.known	chr5	-	2391	6	FSM	ENSG00000113430.10	ENST00000513692.5	2391	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.82842712474619	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTTAAAACCAGG	NA	False	NA	14	True	AATAAA	-29	NA	1887236	1877412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602_1882748_1887061
transcript_147220.known	chr5	-	2394	5	FSM	ENSG00000113430.10	ENST00000231357.7	2394	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1.4790199457749	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTTAAAACCAGG	-4	True	NA	14	True	AATAAA	-29	NA	1882925	1877412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602
transcript_147223.nic	chr5	-	2522	4	ISM	ENSG00000113430.10	ENST00000231357.7	2394	5	380	35	199	0	3prime_fragment	FALSE	canonical	2	6	junction_1	0.816496580927726	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAACCGAGTGATGGT	4588	False	NA	-21	True	AATATA	-8	NA	1882545	1877447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807
transcript_147227.nnic	chr5	+	1115	3	NNC	ENSG00000248994.2	novel	1620	3	NA	NA	-286	-34451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCTTCCACATTAAATC	NA	False	NA	NA	False	NA	NA	NA	1930777	2066845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_1931390_1933802_1933986_2066525
transcript_147229.known	chr5	-	2630	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	44.1665880502445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATATTTATTTCT	-3	True	NA	-9	True	AATAAA	-17	NA	2751662	2745844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
transcript_147232.known	chr5	-	3079	4	FSM	ENSG00000170561.13	ENST00000302057.6	3079	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	24.9131825880731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTGGGGCTTATT	5	True	NA	77	True	AATAAA	-21	NA	2751677	2746164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_2747617_2748344_2749053_2749381_2749788_2751164
transcript_147236.known	chr5	+	1441	3	FSM	ENSG00000186493.14	ENST00000515640.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCGACTCTTACTAC	1	True	NA	13	True	AATAAA	-22	NA	2752245	2754373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_2752465_2752621_2752755_2753284
transcript_147237.known	chr5	+	681	3	FSM	ENSG00000186493.14	ENST00000397835.4	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAAGCGACTCCTGATC	20	True	NA	-9	True	AAGAAA	-26	NA	2752264	2755376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_2752465_2752621_2752755_2755028
transcript_147238.known	chr5	+	387	2	FSM	ENSG00000186493.14	ENST00000649739.1	387	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGAGGCCGAGCGC	8	True	NA	NA	False	NA	NA	NA	2752130	2755081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_2752465_2755028
transcript_147239.known	chr5	-	1633	4	FSM	ENSG00000250579.3	ENST00000512155.3	1684	4	34	17	34	0	multi-exon	TRUE	canonical	3	27	junction_3	18.006171781426	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-16	False	NA	-39	True	AATAAA	-4	NA	5140119	5132100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139955
transcript_14724.known	chr1	+	1700	8	FSM	ENSG00000160753.16	ENST00000490373.5	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	91.0478681008748	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCACCTGTAAGGTGAAA	14	True	NA	20	True	AATAAA	-20	NA	155324521	155330730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_147240.known	chr5	+	4979	23	FSM	ENSG00000145536.15	ENST00000274181.7	4979	23	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_19	4.39571541954058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAACTACCTCATGAT	-1	True	NA	14	True	AATAAA	-20	NA	5140329	5320304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788_5222885_5232367_5232517_5235013_5235187_5236968_5237100_5239150_5239275_5239680_5239926_5242052_5242192_5262656_5262784_5303267_5303470_5303571_5303767_5306503_5306729_5318133_5318282_5319022
transcript_147245.known	chr5	+	2682	11	FSM	ENSG00000145536.15	ENST00000511368.5	2682	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	3.82753184180093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATACTCCATACTAATAT	-1	True	NA	NA	False	ATTAAA	-14	NA	5140329	5223727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788
transcript_147248.known	chr5	+	7930	19	FSM	ENSG00000164151.12	ENST00000296564.9	7930	19	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_9	37.5629923603236	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTCTGATTATTA	-20	True	NA	18	True	AATAAA	-21	NA	5422676	5490220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426_5447510_5447720_5447761_5447840_5447898_5454551_5454639_5457331_5457742_5460435_5465227_5466333_5466503_5468827_5468989_5473557_5473749_5475972_5476080_5486720_5486820_5489148
transcript_147253.nic	chr5	+	748	8	ISM	ENSG00000164151.12	ENST00000296564.9	7930	19	-31	42740	-31	-7135	5prime_fragment	FALSE	canonical	3	203	junction_4	19.7473842235743	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAAGGAATTTAAG	NA	False	NA	NA	False	AAGAAA	-2	NA	5422645	5447480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426
transcript_147255.known	chr5	+	1074	3	FSM	ENSG00000164151.12	ENST00000505464.1	1074	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGAGTCCCTGAAATTTA	45	False	NA	NA	False	AGTAAA	-17	NA	5422741	5437836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5423000_5436417_5436477_5437079
transcript_147256.known	chr5	-	1101	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_3	33.6386021641143	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTTCCCAGAGGGT	-6	True	NA	44	True	AATATA	-27	NA	6378547	6371873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
transcript_147268.known	chr5	-	3056	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_5	61.6397588942657	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTGATTCCTGTTT	2	True	NA	NA	False	AATAAA	-15	NA	6633044	6599238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_14727.known	chr1	+	1749	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	127.110429251458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	31	True	NA	24	True	AATAAA	-15	NA	155324538	155331114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_147270.known	chr5	-	2619	18	FSM	ENSG00000037474.15	ENST00000506139.5	2619	18	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_16	172.021624938165	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAGTATTTTTTAAA	4	True	NA	NA	False	NA	NA	NA	6633042	6599568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6632598_6632757_6632883
transcript_147272.known	chr5	-	3217	18	FSM	ENSG00000037474.15	ENST00000504374.5	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	183.52684764423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTGTGATTCCTGTT	17	True	NA	NA	False	AATAAA	-14	NA	6633291	6599239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_147281.known	chr5	+	3778	3	FSM	ENSG00000250056.8	ENST00000664093.1	3778	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAACCGTAGATTTGTC	-15	True	NA	NA	False	ATTAAA	-8	NA	6583272	6589222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_6583802_6585773_6586028_6586227
transcript_147283.known	chr5	+	7035	5	FSM	ENSG00000145545.12	ENST00000274192.7	7035	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	8.38152730712011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTTTGCTCATTGGAT	-4	True	NA	35	True	ATTAAA	-30	NA	6633439	6674386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_6633870_6651841_6652009_6656077_6656180_6662815_6662967_6668201
transcript_147287.known	chr5	+	1467	4	FSM	ENSG00000145545.12	ENST00000513117.1	1467	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	55.4276304943863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCCTAAACAGGCACCT	-17	True	NA	NA	False	NA	NA	NA	6633426	6668972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_6633870_6656077_6656180_6662815_6662967_6668201
transcript_147290.nic	chr5	+	1819	2	ISM	ENSG00000145545.12	ENST00000504286.1	662	3	-353	634	-324	-634	5prime_fragment	FALSE	canonical	3	110	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGGGATCTTATATATAA	NA	False	NA	NA	False	NA	NA	NA	6633102	6652893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_6633870_6651841
transcript_147296.nnic	chr5	+	4125	25	NNC	ENSG00000078295.17	novel	756	7	NA	NA	-1777	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_1	146.923142228249	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	NA	False	NA	17	True	ATTAAA	-18	NA	7394360	7827532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_7394759_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
transcript_147298.known	chr5	+	6645	25	FSM	ENSG00000078295.17	ENST00000338316.9	6645	25	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_19	118.379656426075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAGA	18	True	NA	NA	False	NA	NA	NA	7396137	7830081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
transcript_147317.known	chr5	-	2028	3	FSM	ENSG00000215217.7	ENST00000399810.7	2028	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCATTTACTTTCAG	-22	True	NA	NA	False	AATAAA	-17	NA	7851133	7830377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7832030_7835381_7835499_7850874
transcript_147318.known	chr5	+	3245	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	40.2307756092578	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	-19	True	NA	6	True	AATAAA	-19	NA	7869147	7901113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_147321.known	chr5	+	3274	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	55.651246387568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	17	True	AATAAA	-30	NA	7869103	7901124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_147323.nic	chr5	+	3128	14	NIC	ENSG00000124275.15	novel	3245	15	NA	NA	10	0	intron_retention	FALSE	canonical	3	141	junction_2	29.4578226216648	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAACTTGGTAAGTTT	NA	False	NA	9	True	AATAAA	-22	NA	7869113	7901116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_147326.known	chr5	+	3076	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	51.1485827251636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-19	True	NA	17	True	AATAAA	-30	NA	7869147	7901124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_147330.nic	chr5	-	2374	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	-26	0	intron_retention	FALSE	canonical	3	18	junction_6	29.2617497767991	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	NA	False	NA	-13	True	AATAAA	-16	NA	7869063	7859158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
transcript_147331.known	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	19.4028921097403	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-4	True	NA	-13	True	AATAAA	-16	NA	7869031	7859158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
transcript_147333.known	chr5	-	637	6	FSM	ENSG00000124279.12	ENST00000282110.8	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	35.1533782160406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAGAAAAATATAAT	17	True	NA	NA	False	NA	NA	NA	7869010	7859380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7868978
transcript_147334.known	chr5	-	819	6	FSM	ENSG00000124279.12	ENST00000513658.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	43.6091733469003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGACTGGTGATCTGA	1	True	NA	NA	False	ATTAAA	-39	NA	7869026	7859335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861774_7862822_7862998_7865897_7865984_7868978
transcript_147335.known	chr5	+	546	4	FSM	ENSG00000124275.15	ENST00000510279.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	23.0120741254576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGGTTTTGAAGCAA	-19	True	NA	NA	False	AAGAAA	-3	NA	7869147	7878149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943
transcript_147336.known	chr5	+	478	3	FSM	ENSG00000124275.15	ENST00000514220.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	91.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCCCACTCTCACAAGC	-19	True	NA	NA	False	NA	NA	NA	7869147	7878235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869216_7875257_7875376_7877943
transcript_147338.known	chr5	-	11755	23	FSM	ENSG00000112902.12	ENST00000382496.10	11755	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.69833961607812	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTAGTGGCATTTTTCT	0	True	NA	-3	True	AATAAA	-18	NA	9546075	9035032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_9043017_9044372_9044585_9050409_9050458_9051872_9052029_9054086_9054258_9062886_9063106_9066420_9066647_9108139_9108288_9118997_9119142_9122655_9122838_9136503_9136622_9154487_9154696_9190266_9190472_9197167_9197304_9201954_9202241_9224673_9224888_9226868_9226968_9237827_9237891_9318371_9318418_9337712_9337813_9379822_9380024_9437755_9437853_9545583
transcript_147348.known	chr5	+	1799	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	4	116	4	-116	multi-exon	FALSE	canonical	3	44	junction_2	33	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATGTCCTCTCTATTC	-6	True	NA	NA	False	AAAAAG	-19	NA	9546199	9550609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_9546531_9548989_9549150_9549301
transcript_147349.known	chr5	+	842	2	FSM	ENSG00000250786.3	ENST00000655411.1	436	2	5	-411	5	411	multi-exon	FALSE	canonical	3	110	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTTAGGGTTCT	-20	True	NA	NA	False	NA	NA	NA	9546289	9549590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_9546531_9548989
transcript_147350.known	chr5	-	2651	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.9642400437689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCCAGCCTCAGGTATGT	3	True	NA	-3	True	ATTAAA	-18	NA	10249888	10225506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
transcript_147353.known	chr5	-	1160	4	FSM	ENSG00000150756.14	ENST00000510047.5	1160	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	23.3666428910958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAATAATTTGTTCC	-6	True	NA	NA	False	NA	NA	NA	10249897	10226955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10227648_10236477_10236616_10239066_10239357_10249857
transcript_147362.known	chr5	+	3293	11	FSM	ENSG00000150753.12	ENST00000280326.9	3293	11	0	0	0	0	multi-exon	FALSE	canonical	3	3536	junction_5	310.449367852473	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTTTTCACGTT	-26	True	NA	21	True	AATAAA	-15	NA	10250279	10266389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10250446_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_147367.known	chr5	+	1997	11	FSM	ENSG00000150753.12	ENST00000515676.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	2	152	junction_1	1147.78449196702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCTGTTTGGTAAC	231	False	NA	-3	True	NA	NA	NA	10250536	10264902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10250894_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_147373.known	chr5	+	1728	10	FSM	ENSG00000150753.12	ENST00000515390.5	1728	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_2	1175.56161519127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTTGTTCAAAGCT	5	False	NA	20	True	AATAAA	-21	NA	10250215	10264925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10250446_10254144_10254206_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_147386.known	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	19.9659710507654	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-29	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
transcript_147391.known	chr5	-	901	4	FSM	ENSG00000164237.9	ENST00000506821.1	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	18.3726850393609	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTCACCGGGAGTCAAG	14	True	NA	NA	False	AATAGA	-30	NA	10307859	10286172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307624
transcript_147394.known	chr5	-	901	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGCTTGACTAATGTTA	12	True	NA	1	True	AATAAA	-29	NA	10353601	10352700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10352700_10353600
transcript_147395.known	chr5	+	9641	26	FSM	ENSG00000145495.16	ENST00000274140.10	9641	26	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_11	36.2933382316921	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGATGCTT	-29	True	NA	NA	False	AATAAA	-17	NA	10353694	10440388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_147400.known	chr5	+	1061	5	FSM	ENSG00000145491.12	ENST00000274134.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTGTAGTGTGAGTGT	-23	True	NA	NA	False	AATACA	-18	NA	10441878	10465026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
transcript_147402.known	chr5	-	2301	4	FSM	ENSG00000112977.16	ENST00000230895.11	2301	4	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_1	25.4863798048204	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTTTTTCTTATAGA	-33	True	NA	-2	True	AATAAA	-20	NA	10761234	10679229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10681170_10683528_10683572_10748174_10748272_10761013
transcript_147403.known	chr5	-	1048	3	FSM	ENSG00000112977.16	ENST00000432074.2	1048	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGGCTGGAGACAGG	-27	True	NA	NA	False	NA	NA	NA	10761228	10680433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10681170_10748174_10748272_10761013
transcript_147404.known	chr5	-	277	2	FSM	ENSG00000112977.16	ENST00000508646.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTATGTGGGGCC	100	True	NA	NA	False	NA	NA	NA	10761101	10748082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10748272_10761013
transcript_147408.known	chr5	+	11460	57	FSM	ENSG00000038382.21	ENST00000344204.9	11460	57	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_44	6.11181421176918	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTTAGGCTTTTTA	2	True	NA	14	True	ATTAAA	-14	NA	14143341	14510204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14143883_14270824_14270900_14280321_14280437_14286870_14287064_14290715_14291229_14293011_14293135_14297071_14297264_14304460_14304593_14316512_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731_14387848_14388612_14388680_14389288_14389399_14390230_14390301_14390900_14390991_14394037_14394131_14397042_14397155_14398879_14399071_14400962_14401065_14405847_14405991_14406572_14406673_14419777_14420022_14461018_14461312_14462754_14462926_14465544_14465641_14471317_14471467_14472591_14472659_14473993_14474098_14476893_14476964_14479260_14479351_14479918_14480012_14481233_14481285_14481540_14481619_14482581_14482774_14485068_14485247_14487463_14488261_14492566_14492815_14496878_14497018_14497846_14497875_14498088_14498252_14498518_14498641_14502578_14502658_14504392_14504594_14507121_14507261_14507879
transcript_147411.known	chr5	+	7040	8	FSM	ENSG00000145569.6	ENST00000274217.4	7040	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	7.24498419034627	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGTTTCAGGCAAGATT	-22	True	NA	NA	False	AATAAA	-28	NA	14581791	14616180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14581959_14600964_14601125_14601212_14601245_14601350_14601443_14602182_14602333_14607329_14607459_14608747_14609018_14610140
transcript_147412.known	chr5	+	7969	7	FSM	ENSG00000154124.5	ENST00000284274.5	7969	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	12.347964294661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGGCTCGGTTGCCTGT	11	True	NA	NA	False	NA	NA	NA	14664717	14699850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14664978_14673641_14673719_14678680_14678776_14681463_14681608_14687520_14687647_14690038_14690309_14692853
transcript_147418.known	chr5	+	742	2	FSM	ENSG00000154124.5	ENST00000507335.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATGGGATCAGTAGCAC	25	True	NA	NA	False	AAGAAA	-4	NA	14664731	14674137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14664978_14673641
transcript_147422.known	chr5	-	8207	12	FSM	ENSG00000154122.14	ENST00000284268.8	8207	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	3.14655787270487	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTTTTAGTTTCTTGA	4	True	NA	NA	False	AGTAAA	-26	NA	14871778	14704799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_14711311_14712873_14712974_14713543_14713668_14716705_14716836_14741826_14741923_14745869_14745963_14749171_14749307_14751068_14751240_14755860_14755945_14758479_14758599_14768974_14769192_14871351
transcript_147424.known	chr5	+	3960	2	FSM	ENSG00000183580.10	ENST00000329673.8	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAGCTTCATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	15927887	15939795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_15928502_15936449
transcript_147425.known	chr5	-	1707	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	30.0798936168332	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTCAGATGTCGTTT	0	True	NA	-9	True	AATAAA	-14	NA	16465800	16451518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
transcript_147427.known	chr5	-	4839	23	FSM	ENSG00000145555.15	ENST00000515803.5	4839	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	117.267521026085	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAATCGACCGTAACT	6369	False	NA	NA	False	NA	NA	NA	16738414	16666379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_147428.known	chr5	-	4803	23	FSM	ENSG00000145555.15	ENST00000505695.5	4803	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	123.629043900969	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGTGTCTCCGAGGATC	0	True	NA	NA	False	AAAACA	-42	NA	16742228	16666561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_147433.nic	chr5	-	2993	23	ISM	ENSG00000145555.15	ENST00000513610.6	11442	41	-55	41070	-55	0	5prime_fragment	FALSE	canonical	0	0	junction_3	95.3985116920482	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	NA	False	NA	9	True	NA	NA	NA	16936343	16702976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
transcript_147445.nic	chr5	-	1887	6	ISM	ENSG00000145555.15	ENST00000513610.6	11442	41	-55	119173	-55	-346	5prime_fragment	FALSE	canonical	3	85	junction_5	20.448960853794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGAAATAAAGAACCG	NA	False	NA	NA	False	NA	NA	NA	16936343	16781079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
transcript_147447.nic	chr5	-	810	5	ISM	ENSG00000145555.15	ENST00000515803.5	4839	23	-2	36597	-2	0	5prime_fragment	FALSE	canonical	0	0	junction_3	165.348873597615	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	6367	False	NA	9	True	NA	NA	NA	16738416	16702976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_147448.nnic	chr5	-	689	5	NNC	ENSG00000145555.15	novel	2910	23	NA	NA	900	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	193.670467547326	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	3803	False	NA	9	True	NA	NA	NA	16740980	16702976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16740820
transcript_147449.nic	chr5	-	986	5	ISM	ENSG00000145555.15	ENST00000505695.5	4803	23	-32	36415	-32	0	5prime_fragment	FALSE	canonical	0	0	junction_3	173.676963066493	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	2523	False	NA	9	True	NA	NA	NA	16742260	16702976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_14745.known	chr1	+	2017	2	FSM	ENSG00000160752.15	ENST00000487002.1	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	2278	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	19	True	NA	NA	False	NA	NA	NA	155308913	155312979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155310206_155312254
transcript_147450.known	chr5	-	1677	4	FSM	ENSG00000145555.15	ENST00000507288.1	1677	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	52.2132379978701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCATTAGTTTTCTT	11	True	NA	NA	False	AATAAA	-21	NA	16936259	16814516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16815464_16818008_16818168_16877608_16877708_16935787
transcript_147451.known	chr5	+	1711	2	FSM	ENSG00000176788.9	ENST00000616743.1	1711	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGGGTTTTTTGTTCT	55	False	NA	13	True	AATAAA	-29	NA	17216822	17276843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_17216898_17275207
transcript_147452.known	chr5	+	1807	2	FSM	ENSG00000176788.9	ENST00000322611.4	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAAAGACTATTGGGTT	2	True	NA	4	True	AATAAA	-20	NA	17217630	17276834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_17217811_17275207
transcript_147458.known	chr5	-	3438	12	FSM	ENSG00000040731.10	ENST00000264463.8	3438	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31110955471418	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTAGCTTCTTTT	0	True	NA	NA	False	AATAAA	-17	NA	24644978	24487099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_24488154_24491575_24491828_24492816_24492926_24498397_24498520_24505111_24505249_24509565_24509820_24511326_24511515_24535111_24535280_24535702_24535823_24537379_24537675_24593259_24593614_24644593
transcript_14746.known	chr1	+	1968	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	77.5914782692017	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	5	True	NA	22	True	AATAAA	-13	NA	155324512	155331112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_147461.known	chr5	-	638	3	FSM	ENSG00000248605.5	ENST00000507887.5	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAACTCTATTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	25445925	25413438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_25413845_25422729_25422856_25445819
transcript_147469.nnic	chr5	-	547	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	-18157	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	42	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGAAAGGACTCCAAGT	NA	False	NA	NA	False	AAAAAG	-10	NA	25445925	25433802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_25434212_25435241_25435274_25445819
transcript_14747.known	chr1	+	2163	8	FSM	ENSG00000160753.16	ENST00000292254.8	2163	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	39.3259534181296	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	20	False	NA	24	True	AATAAA	-15	NA	155324576	155331114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_147471.nnic	chr5	-	928	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	373	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAGAGAGATGATTGAC	NA	False	NA	-7	True	AATAAA	-14	NA	25445968	25413065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_25413845_25445819
transcript_147473.nnic	chr5	-	712	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	157	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTGATATTTTAAACAA	NA	False	NA	-23	True	AATAAA	-16	NA	25445968	25413281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_25413845_25445819
transcript_147474.nnic	chr5	-	470	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	-85	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGAAAGTTTATTTAC	NA	False	NA	NA	False	CATAAA	-11	NA	25445968	25413523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_25413845_25445819
transcript_147476.nnic	chr5	-	672	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-157	-18157	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGAAAGGACTCCAAGT	NA	False	NA	NA	False	AAAAAG	-10	NA	25446082	25433802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_25434212_25445819
transcript_147478.known	chr5	+	1325	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	14.3836326735943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	-8	True	NA	NA	False	AATAAA	-28	NA	27472279	27485686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
transcript_14748.known	chr1	+	808	5	FSM	ENSG00000160752.15	ENST00000495308.5	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	612.998572592139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTAAGTTTTGGGGCTT	-2	True	NA	9	True	GATAAA	-21	NA	155308892	155318518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168
transcript_147484.nic	chr5	+	2757	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-33	-12	-2	12	multi-exon	FALSE	canonical	3	49	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCACAGCCCTAGAGAA	-20	True	NA	NA	False	ATTAAA	-32	NA	27472267	27478039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534
transcript_147485.nic	chr5	+	2902	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-33	-157	-2	157	multi-exon	FALSE	canonical	3	49	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACATAATAAAACACCT	-20	True	NA	NA	False	AAAAAG	-17	NA	27472267	27478184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534
transcript_147486.known	chr5	+	1177	6	FSM	ENSG00000250337.8	ENST00000514844.6	1177	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.6053755672924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCATTTTGTAATTAC	-17	True	NA	NA	False	AATAAA	-27	NA	27472270	27496405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27489281_27489387_27494234_27494336_27495948
transcript_147487.known	chr5	+	2569	11	FSM	ENSG00000113361.13	ENST00000514738.5	2569	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	4.51774279923061	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTATGATGACTTTTCTC	-11	True	NA	NA	False	TATAAA	-36	NA	31193749	31318346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31193887_31267345_31267702_31293961_31294257_31297288_31297409_31299463_31299632_31302110_31302299_31305173_31305428_31313317_31313455_31316207_31316330_31317374_31317493_31317672
transcript_147488.known	chr5	-	5416	36	FSM	ENSG00000113360.17	ENST00000344624.8	5416	36	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_30	68.6537363164168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-10	True	NA	NA	False	AATAAA	-25	NA	31532093	31400493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_14749.nic	chr1	-	2444	4	NIC	ENSG00000116539.14	novel	5489	6	NA	NA	0	-20934	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	5.24933858267454	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACCTCGGTGGAC	NA	False	NA	NA	False	ATTAAA	-11	NA	155562841	155480730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155482450_155521099_155521619_155562152_155562296_155562778
transcript_147492.known	chr5	-	5305	35	FSM	ENSG00000113360.17	ENST00000511367.6	5305	35	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_34	66.6489343487725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTTTCATTCATCAT	22	True	NA	NA	False	AATAAA	-22	NA	31532061	31400496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
transcript_147493.known	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_29	73.0224701161808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-26	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_147507.known	chr5	+	3572	9	FSM	ENSG00000082213.18	ENST00000325366.14	3572	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	25.7678942678675	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTAAGTGTAAGCGT	-24	True	NA	NA	False	ATTAAA	-30	NA	31532300	31555053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_147508.known	chr5	+	3117	9	FSM	ENSG00000082213.18	ENST00000510659.5	3117	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	90.960156112443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	-38	True	NA	25	True	AATAAA	-18	NA	31532286	31554808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_147509.known	chr5	+	505	2	FSM	ENSG00000082213.18	ENST00000515409.5	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATTTTAGGTTTGCTG	-30	True	NA	NA	False	NA	NA	NA	31532294	31534597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31532474_31534271
transcript_147511.known	chr5	-	1074	4	FSM	ENSG00000113384.14	ENST00000503610.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	386.207485973825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGAATGCTTTTGCT	5	True	NA	NA	False	NA	NA	NA	32174302	32126366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173745
transcript_147512.known	chr5	-	2678	4	FSM	ENSG00000113384.14	ENST00000265070.7	2678	4	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_2	17.1075032271418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCAAGCATGTCATTT	-12	True	NA	-17	True	AATAAA	-28	NA	32174319	32124715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173809
transcript_147516.known	chr5	-	5116	16	FSM	ENSG00000150712.11	ENST00000382142.8	5116	16	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	35.0570328972028	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTACTTGGTGTGGTTG	5	True	NA	-33	True	ATTAAA	-18	NA	32312939	32227006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32230348_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
transcript_147523.known	chr5	-	2215	14	FSM	ENSG00000150712.11	ENST00000264934.5	2215	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	90.1254221403502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACTATGCAATTAAAAC	-25	True	NA	22	True	NA	NA	NA	32312969	32229607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32230348_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
transcript_147524.known	chr5	-	4717	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	0	0	0	multi-exon	TRUE	canonical	1	196	junction_12	110.843604728199	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTGCATCTTGTTA	4	True	NA	-12	True	AGTAAA	-17	NA	32444740	32354349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_14753.nic	chr1	-	2302	3	ISM	ENSG00000116539.14	ENST00000679133.1	11431	28	-1	145430	-1	-20934	5prime_fragment	FALSE	canonical	3	6	junction_2	3	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACCTCGGTGGAC	NA	False	NA	NA	False	ATTAAA	-11	NA	155562842	155480730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_155482450_155521099_155521619_155562778
transcript_147534.nic	chr5	-	1177	7	ISM	ENSG00000056097.16	ENST00000265069.13	4717	20	-21	49706	-21	2671	5prime_fragment	FALSE	canonical	3	497	junction_3	55.0799923343818	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGCATTGAAAGCCTC	-17	True	NA	NA	False	TATAAA	-34	NA	32444761	32404055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_147536.known	chr5	-	1159	6	FSM	ENSG00000056097.16	ENST00000505366.1	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	56.3240623534915	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGGTATTCTAACTCC	6	True	NA	NA	False	NA	NA	NA	32444738	32406726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_147538.known	chr5	+	1658	6	FSM	ENSG00000113387.12	ENST00000511615.5	1658	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1989.4890399296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTATATGTAGCCAG	-6	True	NA	40	True	NA	NA	NA	32585558	32601988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32594570_32594873_32598960_32599070_32601004
transcript_147540.known	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3967	junction_4	143.147651046044	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	-8	True	NA	26	True	AATAAA	-14	NA	32585556	32604079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_147549.known	chr5	+	2672	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	0	0	0	0	multi-exon	FALSE	canonical	3	1294	junction_9	190.44275897089	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAAGACTGCTC	-11	True	NA	12	True	AATAAA	-16	NA	33440964	33468086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_147554.nic	chr5	+	2167	18	ISM	ENSG00000113407.14	ENST00000265112.8	2672	19	-22	1101	-21	68	5prime_fragment	FALSE	canonical	3	1294	junction_9	193.725932761263	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATGGAAACTTACCA	176	False	NA	NA	False	AATAAA	-44	NA	33440942	33466985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870
transcript_147561.known	chr5	+	2481	18	FSM	ENSG00000113407.14	ENST00000508361.5	2481	18	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	407.182793091284	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTTCAAGACTGCT	-12	True	NA	11	True	AATAAA	-15	NA	33440963	33468085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_33441144_33445323_33445405_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_147571.nnic	chr5	-	817	4	NNC	ENSG00000151388.11	novel	1003	3	NA	NA	-607	-124	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	29.5334085777823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTCTCTTATCTCCTC	NA	False	NA	-27	True	ATTAAA	-17	NA	33892626	33751321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_33751549_33881118_33881481_33891729_33891842_33892510
transcript_147572.known	chr5	-	1003	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCGAGTCTCTGCATA	7	True	NA	-75	True	TATAAA	-15	NA	33892019	33751197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33751549_33881118_33881481_33891729
transcript_147575.known	chr5	-	4108	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	3.34477204006491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTTATTTACATTTT	-5	True	NA	NA	False	AGTAAA	-40	NA	34008050	33986164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_147581.known	chr5	-	2919	4	FSM	ENSG00000242110.8	ENST00000382072.6	2919	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	46.6761895045715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	14	True	NA	-2	True	AATAAA	-20	NA	34008031	33987173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33989503_33998640_33998828_34005755_34005900_34007772
transcript_147583.known	chr5	-	1316	5	FSM	ENSG00000242110.8	ENST00000426255.6	1316	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.1631342418659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTGGACATT	8	True	NA	NA	False	AATAAA	-12	NA	34008084	33997006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33997519_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_147585.known	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_10	92.5067658612266	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	11	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_147588.known	chr5	+	2941	17	FSM	ENSG00000039560.14	ENST00000512629.5	2941	17	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_10	160.232143603429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTCCTTGGCAGGAC	4	True	NA	-4	True	NA	NA	NA	34656438	34830765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_147590.nic	chr5	+	1984	15	ISM	ENSG00000039560.14	ENST00000265109.8	4986	18	-152	9134	-152	1645	5prime_fragment	FALSE	canonical	3	530	junction_10	86.8152213212708	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGAAAGAAATAAAGAGAAA	NA	False	NA	-32	True	AATAAA	-39	NA	34656175	34823478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_147591.nic	chr5	+	2054	15	ISM	ENSG00000039560.14	ENST00000265109.8	4986	18	-36	8948	-36	1831	5prime_fragment	FALSE	canonical	3	530	junction_10	86.8152213212708	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATGAAATTAAAAGACACA	-25	True	NA	NA	False	AAGAAA	-1	NA	34656291	34823664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_147593.nic	chr5	+	1735	14	ISM	ENSG00000039560.14	ENST00000512629.5	2941	17	-101	7287	10	1645	5prime_fragment	FALSE	canonical	3	150	junction_10	166.169728585639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGAAAGAAATAAAGAGAAA	21	True	NA	-32	True	AATAAA	-39	NA	34656337	34823478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_147598.known	chr5	+	550	3	FSM	ENSG00000039560.14	ENST00000514931.5	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_1	62.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCGATAAGAAATAGCAT	29	True	NA	NA	False	NA	NA	NA	34656410	34757868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34656476_34686871_34686956_34757467
transcript_147599.nic	chr5	+	3168	2	ISM	ENSG00000039560.14	ENST00000514931.5	550	3	-67	67961	16	1624	5prime_fragment	FALSE	canonical	3	709	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTCAAAAATCTTATGG	27	True	NA	NA	False	AAAACA	-29	NA	34656343	34689907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871
transcript_147600.known	chr5	-	1565	2	FSM	ENSG00000272323.1	ENST00000606401.1	1565	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTCTTTTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34839278	34837548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34839018_34839182
transcript_147601.known	chr5	+	1591	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_9	58.1587864767177	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	-11	True	NA	NA	False	ATTAAA	-28	NA	34915710	34925996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_147608.known	chr5	+	743	8	FSM	ENSG00000113460.13	ENST00000506023.1	743	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	411.35103436042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTGTAACACCAGC	30	False	NA	64	True	AAGAAA	-37	NA	34915751	34925345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34915898_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_147613.known	chr5	-	1328	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	142.057206786562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGAAGATAGGAGCAA	2523	False	NA	-112	True	NA	NA	NA	34915615	34908654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
transcript_14762.known	chr1	+	2438	14	FSM	ENSG00000125459.17	ENST00000649846.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	64.6641757181036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	0	True	NA	9	True	NA	NA	NA	155610217	155614933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614061
transcript_147620.known	chr5	-	4512	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	59.030161781923	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGTGTATAGTATTTTT	3	True	NA	0	True	AATAAA	-21	NA	34915504	34905259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
transcript_147628.known	chr5	-	1153	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	109.984942151187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCAGGACTGTCCTT	-6	True	NA	-11	True	AATAAA	-19	NA	34915548	34908553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
transcript_147633.known	chr5	-	2341	9	FSM	ENSG00000113456.19	ENST00000341754.8	2341	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	147.244641243748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAAAGGCTTAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	34918989	34908171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415_34915627_34918051_34918137_34918231_34918298_34918521
transcript_147636.known	chr5	-	1678	3	FSM	ENSG00000113456.19	ENST00000628399.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	174.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACGAAGATCGCTTGAGC	1369	False	NA	-117	True	NA	NA	NA	34916769	34913969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34914027_34914694_34914962_34915415
transcript_147637.known	chr5	+	6208	13	FSM	ENSG00000168724.17	ENST00000382021.2	6208	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	78.5550054986243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	-36	True	NA	8	True	AATAAA	-18	NA	34929592	34958964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
transcript_147638.known	chr5	+	6107	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_8	24.2330284822489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	13	True	NA	8	True	AATAAA	-18	NA	34929558	34958964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_147640.known	chr5	+	2338	12	FSM	ENSG00000168724.17	ENST00000642675.1	2338	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	77.9501854068268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	29	False	NA	-25	True	AAAAAG	-29	NA	34929976	34955168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_147645.known	chr5	-	4918	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.04611904907235	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAGTCTATTGAGTAA	5	True	NA	NA	False	AAAAAG	-14	NA	35991390	35951005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
transcript_14765.nic	chr1	+	1813	14	NIC	ENSG00000125459.17	novel	2422	14	NA	NA	-33	125	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	53.1500054273099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGTCTTCATGCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	155610171	155614329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613734_155614058
transcript_147652.known	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	24.5181338785987	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	13	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
transcript_147654.known	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	77.0158425260673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	13	True	NA	-97	True	NA	NA	NA	36066882	36035336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
transcript_147655.known	chr5	-	1476	6	FSM	ENSG00000168671.10	ENST00000504685.5	1476	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	93.6448610442666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACACCCTGACTCTTCC	13	True	NA	-115	True	NA	NA	NA	36066882	36035354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36051869_36051985_36064248_36064351_36066695
transcript_147658.nic	chr5	-	1285	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	401	-776	-1	776	3prime_fragment	FALSE	canonical	3	212	junction_1	28.5228952870419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATGCAGTAATTGTTAA	12	True	NA	44	True	AATAAA	-18	NA	36066883	36048540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
transcript_147659.nic	chr5	-	1297	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	337	-724	-65	724	3prime_fragment	FALSE	canonical	3	212	junction_1	28.5228952870419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTTATTTTGTGTGAT	NA	False	NA	-8	True	ATTAAA	-17	NA	36066947	36048592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
transcript_147660.known	chr5	-	8116	18	FSM	ENSG00000164187.7	ENST00000296603.5	8116	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	6.27346805077407	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTATGTTTGAAAG	11	True	NA	1	True	AATAAA	-26	NA	36151887	36098406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
transcript_147665.known	chr5	-	4011	12	FSM	ENSG00000152620.13	ENST00000381937.9	4011	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	15.9192175562528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATTTCACTTTTTAAT	-12	True	NA	NA	False	ATTAAA	-21	NA	36241925	36192588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
transcript_147666.known	chr5	-	2507	12	FSM	ENSG00000152620.13	ENST00000282512.7	2507	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	35.2738987621768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGTATATC	28	False	NA	-7	True	AATAAA	-20	NA	36242142	36193712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_14767.nic	chr1	+	2419	14	NIC	ENSG00000125459.17	novel	2422	14	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	53.1500054273099	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGATTTGCAAAATCTT	NA	False	NA	11	True	NA	NA	NA	155610171	155614935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613734_155614058
transcript_147677.known	chr5	+	3715	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_9	86.5778747432722	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACATATGTATACATGTG	-16	True	NA	NA	False	TTTAAA	-45	NA	36152110	36184319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_147678.known	chr5	+	1537	10	FSM	ENSG00000145604.17	ENST00000274254.9	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	162.959435988769	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGTATTCCTTTTTT	NA	False	NA	29	True	AATAAA	-30	NA	36151988	36184041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_147682.known	chr5	+	3299	9	FSM	ENSG00000145604.17	ENST00000620197.5	3299	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	236.944481893966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTTTTATAAAAATG	-43	True	NA	-1	True	TTTAAA	-8	NA	36152083	36184011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_147686.known	chr5	+	3294	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	227.784403274236	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACACATTTTTATAA	-20	True	NA	-6	True	TTTAAA	-3	NA	36152106	36184006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_147688.known	chr5	+	821	5	FSM	ENSG00000145604.17	ENST00000508514.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	312.821334790324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAGAACAGGGAAAATA	-5	True	NA	NA	False	NA	NA	NA	36152121	36182057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36176964_36177017_36177184_36177293_36181817
transcript_147693.known	chr5	+	3919	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	9.27095557555696	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	-7	True	NA	18	True	AATAAA	-23	NA	36606605	36688334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_147695.known	chr5	+	3918	9	FSM	ENSG00000079215.15	ENST00000680125.1	3918	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	26.9950805703558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAACATCTTTGCACGT	256	False	NA	11	True	AATAAA	-16	NA	36606464	36688327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36686064
transcript_147696.known	chr5	+	2368	3	FSM	ENSG00000079215.15	ENST00000681775.1	2368	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTTGTGTAATTTTT	387	False	NA	NA	False	AAGAAA	-6	NA	36606595	36631401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449
transcript_147698.known	chr5	-	5337	1	FSM	ENSG00000285967.1	ENST00000649921.1	5337	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTGTTTCTATTTCT	95	False	NA	NA	False	AATAAA	-14	NA	36876700	36871363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36871400_36876700
transcript_147699.nic	chr5	+	4757	12	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-787	63620	-766	64	5prime_fragment	FALSE	canonical	3	28	junction_1	8.0822220985065	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCATCAGTGTCAACG	-14	True	NA	10	True	NA	NA	NA	36876002	37000570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372
transcript_14770.known	chr1	+	2422	14	FSM	ENSG00000125459.17	ENST00000245564.8	2422	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_13	20.7407211734042	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTTATTCCACACA	0	True	NA	27	True	NA	NA	NA	155610217	155614951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
transcript_147703.nic	chr5	+	1474	9	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-16	88293	5	0	5prime_fragment	FALSE	canonical	3	28	junction_1	5.23061898822692	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGCAAGGATGAAAAAGA	12	True	NA	NA	False	AAGAAA	-26	NA	36876773	36975897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775
transcript_147707.known	chr5	-	8068	35	FSM	ENSG00000113569.16	ENST00000231498.8	8068	35	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_17	38.2707527889267	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCTTCCATTAAAT	-11	True	NA	-7	True	AATAAA	-15	NA	37371106	37288136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_147711.nnic	chr5	-	4226	34	NIC	ENSG00000113569.16	novel	8068	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	58.2922405438466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGGTGTTCTAAATCT	-8	True	NA	-35	True	AATAAA	-18	NA	37371103	37291838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_37292039_37292878_37292986_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_147713.nic	chr5	-	2860	24	ISM	ENSG00000113569.16	ENST00000231498.8	8068	35	-48	21076	-48	-8199	5prime_fragment	FALSE	canonical	3	205	junction_6	26.8279542722658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTTAAGGGAATCATTA	309	False	NA	NA	False	AAAAAG	-4	NA	37371154	37309212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_147714.known	chr5	+	2877	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_11	19.1088667619861	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCTTTAGTGACTA	-9	True	NA	NA	False	ATTAAA	-16	NA	37379317	37753435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
transcript_147725.known	chr5	+	365	3	FSM	ENSG00000082068.9	ENST00000505799.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	13	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGCCAAGGCGGGCA	0	True	NA	NA	False	NA	NA	NA	37379301	37381809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_37379393_37379488_37379555_37381601
transcript_147726.known	chr5	+	3963	23	FSM	ENSG00000164318.18	ENST00000354891.7	3963	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	2.08893187146837	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAATCATAATCATAAT	33	False	NA	NA	False	AATAAA	-18	NA	38258408	38464549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_38258852_38337519_38337630_38338697_38338782_38350500_38350619_38352195_38352332_38370295_38370463_38406125_38406242_38406827_38407147_38407804_38407906_38409003_38409105_38412503_38412649_38418065_38418256_38424966_38425093_38427008_38427253_38431176_38431289_38435136_38435254_38438274_38438456_38445678_38445703_38448300_38448380_38451314_38451459_38458310_38458395_38462907_38463012_38463831
transcript_147753.known	chr5	-	10553	20	FSM	ENSG00000113594.10	ENST00000453190.7	10553	20	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_12	13.8468072862361	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTAGTTTATGTCCT	1	True	NA	NA	False	AATAAA	-26	NA	38556646	38474667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_38482219_38482588_38482668_38484774_38484869_38485818_38485981_38489077_38489246_38490189_38490292_38493605_38493786_38496381_38496596_38499512_38499584_38502636_38502800_38503975_38504122_38505904_38506075_38506502_38506633_38510463_38510719_38511789_38511965_38523418_38523583_38527154_38527295_38528725_38528841_38530505_38530667_38556333
transcript_147761.known	chr5	-	7505	39	FSM	ENSG00000164327.13	ENST00000296782.9	7505	39	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	7.83609801705951	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACGCTTAAATTTATAG	-4	True	NA	NA	False	ACTAAA	-12	NA	39074399	38940019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_38942379_38942832_38942972_38944445_38944570_38944912_38945069_38945490_38945725_38946467_38946553_38947263_38947442_38949355_38949428_38949711_38950721_38952195_38952426_38952984_38953092_38953460_38953554_38954773_38954862_38955594_38955705_38957651_38957731_38958442_38958520_38958666_38958832_38959194_38959322_38959778_38959979_38960397_38960534_38962314_38962362_38962484_38962587_38962875_38963042_38964791_38964893_38966640_38966722_38967160_38967228_38967336_38967428_38967942_38968031_38971876_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
transcript_147762.known	chr5	+	1740	7	FSM	ENSG00000145623.13	ENST00000502536.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTAGTGTTGCTGTAGT	28	False	NA	4	True	ATTAAA	-20	NA	38845857	38886657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_38846127_38869031_38869118_38876200_38876374_38881592_38881765_38883826_38884112_38885348_38885485_38886038
transcript_147764.known	chr5	-	4345	15	FSM	ENSG00000153071.15	ENST00000320816.11	4345	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	8.01783725737273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTACCATCGGTTT	1	True	NA	-2	True	AATAAA	-43	NA	39424980	39371676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_147768.known	chr5	-	4537	14	FSM	ENSG00000153071.15	ENST00000545653.5	4537	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.5504897473927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTACCATCGGTTTAT	-22	True	NA	0	True	AATAAA	-45	NA	39425233	39371674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_147770.known	chr5	-	5497	5	FSM	ENSG00000113638.14	ENST00000337702.5	5497	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	20.8386659841747	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGTGGACATATGT	-31	True	NA	-12	True	AATAAA	-24	NA	40755961	40711575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755823
transcript_147772.known	chr5	+	3431	3	FSM	ENSG00000171522.6	ENST00000302472.4	3431	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTGCATATCCTCAG	-19	True	NA	3	True	AATAAA	-14	NA	40679914	40693735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_40680479_40680950_40681861_40691778
transcript_147773.known	chr5	-	5088	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	-10	-9	10	multi-exon	FALSE	canonical	3	125	junction_1	12.9034879005639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTTATGTTTTTTA	215	False	NA	1	True	AATAAA	-26	NA	40798198	40759378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
transcript_147778.known	chr5	-	668	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCCATTCATGTAT	254	False	NA	NA	False	AATAAA	-2	NA	40798159	40777015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40777587_40798062
transcript_147783.known	chr5	-	7573	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	0	0	0	multi-exon	FALSE	canonical	3	8479	junction_3	1607.97104727942	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTTTTGCAGCAAATT	-5	True	NA	NA	False	AATAAA	-18	NA	40835222	40825261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
transcript_147784.known	chr5	-	505	4	FSM	ENSG00000145592.14	ENST00000504562.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_3	5211.97367180184	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATCTGGTTTTGGTAA	2	True	NA	-33	True	AATAAA	-19	NA	40835186	40832457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835018
transcript_147785.known	chr5	-	7706	3	FSM	ENSG00000182836.10	ENST00000377801.8	7706	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTTTTATTTTAAT	-19	True	NA	-17	True	AATAAA	-17	NA	41510601	41306951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_41313771_41381825_41382535_41510423
transcript_147789.known	chr5	-	3294	17	FSM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	24.1828160839469	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTGACTGTCCTTT	-1	True	NA	-1	True	AATAAA	-18	NA	41870425	41730064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_41731771_41739389_41739492_41749526_41749608_41762110_41762201_41794002_41794079_41794676_41794750_41801021_41801071_41803068_41803164_41805566_41805682_41807330_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_147793.nic	chr5	-	936	8	ISM	ENSG00000083720.13	ENST00000196371.10	3294	17	-57	77294	-57	-57758	5prime_fragment	FALSE	canonical	3	186	junction_2	23.1375655326033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAGAAAAATATGAGAAAA	289	False	NA	NA	False	TATAAA	-1	NA	41870482	41807358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_147794.known	chr5	+	5246	6	FSM	ENSG00000205765.10	ENST00000381647.7	5246	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	16.5093912667912	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTGTTTTATATT	-5	True	NA	5	True	AATAAA	-15	NA	41904343	41921636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068_41912184_41917015
transcript_147797.known	chr5	+	3493	9	FSM	ENSG00000198865.10	ENST00000361970.10	3493	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	15.4550760269887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGTACTTTATTTGG	-19	True	NA	13	True	ATTAAA	-17	NA	42756817	42802439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828_42796957_42799374_42799459_42799658
transcript_147801.nic	chr5	+	615	7	ISM	ENSG00000198865.10	ENST00000361970.10	3493	9	-12	5508	-12	-3420	5prime_fragment	FALSE	canonical	3	97	junction_1	15.7338982949413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATAATCAAGCTACAAC	NA	False	NA	NA	False	AAAAAG	-11	NA	42756805	42796931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828
transcript_147802.nic	chr5	+	457	6	ISM	ENSG00000198865.10	ENST00000361970.10	3493	9	-12	18918	-12	-16830	5prime_fragment	FALSE	canonical	3	97	junction_1	15.7403938959608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGGGATATAAGAAAGA	NA	False	NA	NA	False	AATATA	-42	NA	42756805	42783521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473
transcript_147804.known	chr5	-	1853	6	FSM	ENSG00000250722.6	ENST00000511224.5	1853	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	228.301029345029	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTCTAAAACTTGAG	-1	True	NA	11	True	AATAAA	-34	NA	42811892	42800111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42809759_42809789_42811835
transcript_147805.known	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	116.233332138419	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-1	True	NA	-2	True	AATAAA	-24	NA	42811892	42799879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
transcript_147806.known	chr5	-	799	3	FSM	ENSG00000250722.6	ENST00000506078.5	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	12.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTCTGTATGTGTTTGT	-1	True	NA	NA	False	NA	NA	NA	42811892	42806582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_42807109_42808150_42808367_42811835
transcript_147808.known	chr5	+	2599	8	FSM	ENSG00000172262.12	ENST00000510026.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	60.8199081262854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	-4	True	NA	NA	False	NA	NA	NA	43120917	43175734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161614_43161708_43161932_43173317_43173449_43174446
transcript_147810.known	chr5	+	3209	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	39.1397287592408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGACTCTTTTTTAAAA	32	False	NA	23	True	AGTAAA	-16	NA	43121595	43176324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_147812.known	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	46.9136322286911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	-8	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_147815.nic	chr5	+	2754	7	NIC	ENSG00000172262.12	novel	3209	8	NA	NA	23	0	intron_retention	FALSE	canonical	3	58	junction_1	39.4799527186478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	-1	True	NA	NA	False	NA	NA	NA	43121562	43175734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_147816.known	chr5	+	3340	7	FSM	ENSG00000172262.12	ENST00000509634.5	3340	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	21.694853460364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	34	False	NA	16	True	AATAAA	-17	NA	43121597	43176247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_147821.known	chr5	+	1050	6	FSM	ENSG00000172262.12	ENST00000515326.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	49.3906873813273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGCGCATGGAAACAGC	NA	False	NA	NA	False	AATAAA	-12	NA	43120882	43161773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708
transcript_147822.known	chr5	+	501	5	FSM	ENSG00000172262.12	ENST00000508259.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.4733992368752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCACTGAGTCATTGC	6	True	NA	NA	False	AAAAAG	-22	NA	43121532	43161332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121569_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_147823.known	chr5	+	572	5	FSM	ENSG00000172262.12	ENST00000509341.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	61.8182820854802	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGCCAAAAAAAGGAA	53	False	NA	NA	False	AAGAAA	-36	NA	43121683	43161294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121829_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_147838.known	chr5	+	1927	2	FSM	ENSG00000172262.12	ENST00000510037.1	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTTATCATATTGAAT	458	False	NA	NA	False	NA	NA	NA	43122088	43125046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43122178_43123208
transcript_147840.known	chr5	+	920	1	FSM	ENSG00000272382.1	ENST00000607830.1	920	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGCCTGTGTTCCT	NA	False	NA	8	True	AATAAA	-20	NA	43033715	43034635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43033700_43034600
transcript_147843.known	chr5	-	5350	11	FSM	ENSG00000112972.15	ENST00000325110.11	5350	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_10	43.6312961072669	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCTCAGGCTCTGT	-1	True	NA	-1	True	AATAAA	-15	NA	43313412	43287469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43307765_43307825_43313355
transcript_147848.known	chr5	-	3466	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	36.3318042491699	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	NA	False	NA	-8	True	AATAAA	-20	NA	43313512	43289394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
transcript_147865.known	chr5	-	2736	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTTGTCATAACT	-2	True	NA	NA	False	AATAAA	-35	NA	43483865	43444251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43446558_43453657_43454044_43483821
transcript_147868.known	chr5	-	2502	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	0	0	0	multi-exon	TRUE	canonical	2	47	junction_12	15.4919333848297	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	2	True	NA	-9	True	AATAAA	-15	NA	43515148	43486708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
transcript_147873.known	chr5	-	2780	11	FSM	ENSG00000172239.14	ENST00000306846.8	2780	11	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_10	160.119830127314	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAGTAGCATCTGGT	-15	True	NA	-6	True	AATAAA	-25	NA	43557077	43526266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
transcript_147874.known	chr5	-	1734	11	FSM	ENSG00000172239.14	ENST00000436644.6	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_10	266.042552987299	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGGTTAGATGCTTAT	-31	True	NA	1	True	AATAAA	-37	NA	43557093	43527091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
transcript_147882.known	chr5	-	1814	11	FSM	ENSG00000172239.14	ENST00000338972.8	1814	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	366.83238679266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	1	True	NA	0	True	AATAAA	-36	NA	43557695	43527092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43557339
transcript_147904.known	chr5	+	6483	22	FSM	ENSG00000112992.18	ENST00000264663.9	6483	22	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	17.3147467066296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTACACATTATAT	30	True	NA	NA	False	AATAAA	-29	NA	43602722	43707405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43602891_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_147908.known	chr5	+	6421	22	FSM	ENSG00000112992.18	ENST00000344920.9	6421	22	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	12.5703462737578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTATAAGTTTTTAC	-26	True	NA	NA	False	AATAAA	-20	NA	43603179	43707396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43603295_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_147916.known	chr5	-	4803	3	FSM	ENSG00000248092.8	ENST00000513560.7	4803	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAGATATAAAATG	-14	True	NA	91	True	NA	NA	NA	43603138	43571593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43575936_43583466_43583567_43602777
transcript_147917.known	chr5	-	557	2	FSM	ENSG00000248092.8	ENST00000515466.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACCCCATCTC	759	False	43603201	NA	False	NA	NA	NA	43603176	43575777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43575936_43602777
transcript_147918.known	chr5	-	468	3	FSM	ENSG00000251141.6	ENST00000505302.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTACTACATACCA	17	True	NA	NA	False	NA	NA	NA	44808741	44745137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_44745409_44745941_44746039_44808641
transcript_147919.known	chr5	-	220	2	FSM	ENSG00000251141.6	ENST00000505637.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	22	True	NA	0	True	ATTAAA	-20	NA	44808736	44777203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_44777329_44808641
transcript_147921.known	chr5	+	1648	5	FSM	ENSG00000112996.11	ENST00000507110.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	43.5229824345713	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAATTAAAAGAACCC	-1	True	NA	4	True	AATAAA	-17	NA	44808946	44815514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912
transcript_147925.known	chr5	-	4202	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	26.4988207284777	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	-16	True	NA	-1	True	AATAAA	-25	NA	50441288	50396191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_147929.nic	chr5	-	1158	6	ISM	ENSG00000170571.12	ENST00000303221.10	4202	9	-155	6997	-93	67	5prime_fragment	FALSE	canonical	3	195	junction_4	32.9205103241125	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACTCAGGTGGGATTT	1901	False	NA	NA	False	AAGAAA	-3	NA	50441443	50403188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_147934.known	chr5	+	7475	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	18.2829319311756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	3	True	NA	NA	False	AATAAA	-19	NA	50666636	50846519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_147935.known	chr5	+	3825	26	FSM	ENSG00000151883.19	ENST00000505554.5	3825	26	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.198851452496	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAATGTATA	145	False	NA	-22	True	NA	NA	NA	50667556	50843374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_50667602_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_147946.known	chr5	+	4371	3	FSM	ENSG00000152684.11	ENST00000274311.3	4371	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	67.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTGTTATCAAGAAT	-28	True	NA	NA	False	AATAAA	-25	NA	52787915	52804044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_52788415_52799884_52801121_52801408
transcript_147947.known	chr5	+	888	2	FSM	ENSG00000152684.11	ENST00000506949.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAATGATTGAAACTTAA	9	True	NA	NA	False	NA	NA	NA	52787952	52801834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_52788415_52801408
transcript_147948.known	chr5	-	4166	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	87.9974747112413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	0	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
transcript_147949.known	chr5	-	3705	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_6	21.3229141222926	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	0	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_147951.known	chr5	+	3137	2	FSM	ENSG00000247796.3	ENST00000499459.2	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	33	False	NA	NA	False	AATAAA	-22	NA	53109898	53115126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53110149_53112239
transcript_147953.known	chr5	+	2538	6	FSM	ENSG00000134363.12	ENST00000396947.7	2538	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	92.63563029418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAATTTTAA	-2	True	NA	-15	True	AATAAA	-10	NA	53480625	53487106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485686
transcript_147954.known	chr5	+	2299	6	FSM	ENSG00000134363.12	ENST00000256759.8	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_4	35.4141214771735	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCAATTCCTGATGAT	1	True	NA	13	True	AATAAA	-38	NA	53480628	53487134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485950
transcript_147958.known	chr5	+	705	4	FSM	ENSG00000134363.12	ENST00000504226.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	93.6055553906925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAGAAAAAAAGAA	656	False	NA	NA	False	NA	NA	NA	53483610	53486090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53483723_53484068_53484294_53484999_53485228_53485950
transcript_147959.known	chr5	+	833	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	480.399167359811	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	1	True	NA	25	True	AATAAA	-43	NA	53560646	53683338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
transcript_147961.known	chr5	+	669	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_2	55.3466349473931	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	-7	True	NA	25	True	AATAAA	-43	NA	53560638	53683338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
transcript_147963.known	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	485.245184302625	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	29	False	NA	25	True	AATAAA	-43	NA	53560674	53683338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
transcript_147964.known	chr5	-	2486	6	NNC	ENSG00000185305.12	novel	3328	5	NA	NA	0	-839	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.60335187685	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTCCCTGCAAGTTC	10	True	NA	-6	True	AATAAA	-13	NA	54310573	53884783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_53886708_54067161_54067168_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_147965.known	chr5	-	578	5	FSM	ENSG00000185305.12	ENST00000507646.2	578	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.330482391973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGGTAGAAGAT	7	True	NA	NA	False	NA	NA	NA	54310576	53887364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_53887384_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_147966.known	chr5	+	5223	2	FSM	ENSG00000178996.14	ENST00000381410.5	5223	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAATGGAATATAATTA	14	True	NA	11	True	AATAAA	-20	NA	54517758	54546586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_54519574_54543178
transcript_147970.known	chr5	+	3422	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	72.7751483833748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	-9	True	NA	NA	False	AAAAAG	-22	NA	55160167	55167071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
transcript_147974.known	chr5	+	3731	3	FSM	ENSG00000164294.14	ENST00000503787.6	3731	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	9.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	-6	True	NA	9	True	AATAAA	-18	NA	55160170	55167297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160397_55160993_55161256_55164054
transcript_147980.known	chr5	+	3245	2	FSM	ENSG00000164294.14	ENST00000296734.6	3245	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	-8	True	NA	NA	False	AAAAAG	-22	NA	55160168	55167071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160397_55164054
transcript_147982.known	chr5	+	1036	3	FSM	ENSG00000164294.14	ENST00000515370.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	98	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATATATGTATGCTTG	-7	True	NA	35	True	AATAAA	-45	NA	55160169	55164754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160244_55160993_55161256_55164054
transcript_147983.known	chr5	-	1726	3	FSM	ENSG00000152669.9	ENST00000501463.2	1726	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAAGTGTCTGTCTGC	16	True	NA	0	True	AATAAA	-20	NA	55233597	55231151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55231861_55232360_55232547_55232766
transcript_147984.known	chr5	-	1361	3	FSM	ENSG00000152669.9	ENST00000282572.5	1361	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAAGTGTCTGTCTGC	5	True	NA	0	True	AATAAA	-20	NA	55233608	55231151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55231861_55232360_55232547_55233142
transcript_147985.nic	chr5	-	2130	2	ISM	ENSG00000152669.9	ENST00000282572.5	1361	3	-173	0	-173	0	intron_retention	FALSE	canonical	2	10	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAAGTGTCTGTCTGC	-13	True	NA	0	True	AATAAA	-20	NA	55233781	55231151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55231861_55232360
transcript_147986.nic	chr5	-	4453	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.9200998499849	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-6	True	NA	-1	True	AATAAA	-17	NA	55307677	55256245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285862_55289269_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_147989.nic	chr5	-	1177	8	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	0	33031	0	6164	5prime_fragment	FALSE	canonical	3	254	junction_1	26.3260559995187	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGGTAAAATTAA	-23	True	NA	-10	True	NA	NA	NA	55307694	55289279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_147991.nic	chr5	-	969	7	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	9	34019	9	5176	5prime_fragment	FALSE	canonical	3	272	junction_6	24.3544428983479	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCAAGGCCAAAAAGAGG	-14	True	NA	NA	False	TTTAAA	-12	NA	55307685	55290267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_147992.nic	chr5	-	1063	6	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-220	37826	-220	1369	5prime_fragment	FALSE	canonical	3	272	junction_5	25.8038756778899	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAGAAAAGAATGAGA	NA	False	NA	NA	False	AGTAAA	-40	NA	55307914	55294074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_147994.nic	chr5	-	992	5	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-220	39130	-220	65	5prime_fragment	FALSE	canonical	3	272	junction_4	28.6127157047352	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTGAGAATTAAGCAT	NA	False	NA	-1	True	AAAACA	-31	NA	55307914	55295378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_147995.nic	chr5	-	443	3	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-2	41091	-2	-1896	5prime_fragment	FALSE	canonical	3	272	junction_2	2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAATAATGACAAAGGAA	-25	True	NA	NA	False	CATAAA	-3	NA	55307696	55297339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55297399_55298590_55298665_55307386
transcript_147996.known	chr5	-	4450	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	20	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.7700445887361	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-3	True	NA	-1	True	AATAAA	-17	NA	55307674	55256245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285856_55289263_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_148001.known	chr5	+	3961	27	FSM	ENSG00000039123.16	ENST00000230640.10	3961	27	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_6	51.7542697549663	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAATTAGTTTTTTCA	-9	True	NA	16	True	AATAAA	-14	NA	55307988	55425579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55308148_55322326_55322465_55324131_55324199_55327715_55327779_55328698_55328812_55340009_55340185_55341680_55341772_55343330_55343456_55344521_55344621_55345093_55345197_55347012_55347145_55349572_55349653_55350918_55351030_55353167_55353270_55358572_55358699_55366724_55366876_55378313_55378487_55379126_55379196_55387973_55388103_55397415_55397527_55400232_55400422_55405424_55405589_55410523_55410630_55414181_55414239_55415969_55416133_55422877_55422983_55424719
transcript_148007.known	chr5	-	1542	6	FSM	ENSG00000067113.17	ENST00000307259.9	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	141.123208580304	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-1	True	NA	-11	True	ATTAAA	-19	NA	55534964	55424853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55534571
transcript_148008.known	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	322.582454575571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-6	True	NA	-11	True	ATTAAA	-19	NA	55534969	55424853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
transcript_148012.nic	chr5	-	1554	5	NIC	ENSG00000067113.17	novel	1550	6	NA	NA	-159	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_4	181.838527270763	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	55535128	55424853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_148013.nic	chr5	-	1478	5	NIC	ENSG00000067113.17	novel	1550	6	NA	NA	-159	-76	combination_of_known_junctions	FALSE	canonical	3	284	junction_4	181.838527270763	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATGTAATATGCTTTC	NA	False	NA	-24	True	ATTAAA	-24	NA	55535128	55424929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_148019.nic	chr5	-	2646	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_14	48.448426187029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-12	True	NA	-3	True	AATAAA	-26	NA	55712335	55625847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
transcript_148022.known	chr5	-	2522	16	FSM	ENSG00000177058.12	ENST00000396865.7	2522	16	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_7	32.5764741288352	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-1	True	NA	-3	True	AATAAA	-26	NA	55712324	55625847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_148036.known	chr5	-	9027	17	FSM	ENSG00000134352.20	ENST00000381298.7	9027	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	10.1665812837945	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGTAAAGTATTTCT	23	True	NA	NA	False	AATAAA	-20	NA	55994963	55935094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55941820_55942669_55942752_55947492_55947590_55951463_55951605_55951928_55952076_55952249_55952352_55954809_55954993_55956024_55956236_55957208_55957292_55960401_55960562_55963351_55963507_55964145_55964313_55968275_55968397_55969549_55969856_55976214_55976294_55982723_55982812_55994783
transcript_148037.known	chr5	-	438	1	FSM	ENSG00000226221.1	ENST00000450941.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	40	False	NA	NA	False	AATACA	-33	NA	56505072	56504634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_56504600_56505100
transcript_148038.known	chr5	+	7036	20	FSM	ENSG00000095015.6	ENST00000399503.4	7036	20	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	8.9278424712321	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACTTTTATTTATT	-7	True	NA	76	True	AATAAA	-15	NA	56815548	56896152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_56816056_56856599_56856751_56859714_56859916_56864733_56864935_56865339_56865457_56865828_56865978_56871909_56872032_56872640_56872723_56872824_56873006_56875031_56875311_56878979_56879102_56880710_56880803_56881082_56881273_56881569_56882867_56883526_56883680_56884663_56884827_56885931_56886064_56887377_56887521_56888225_56888358_56893530
transcript_148043.known	chr5	-	5198	13	FSM	ENSG00000155545.20	ENST00000381213.7	5198	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	16.4170896730612	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-5	True	NA	-4	True	AATAAA	-16	NA	56952125	56919602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928859_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_148044.known	chr5	+	1396	6	FSM	ENSG00000155542.12	ENST00000285947.5	1396	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	15.0253119767944	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	-18	True	NA	NA	False	AGTAAA	-29	NA	56909595	56917348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_56909744_56911168_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_148054.nnic	chr5	+	2888	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	1	166	junction_3	325.897851668621	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173824	57263085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_148059.nic	chr5	+	2939	13	NIC	ENSG00000062194.16	novel	4506	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	166	junction_3	312.040183932917	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	2	True	NA	20	True	AATAAA	-23	NA	57174058	57263085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_148061.known	chr5	+	4683	13	FSM	ENSG00000062194.16	ENST00000424459.7	4683	13	0	0	0	0	multi-exon	FALSE	canonical	1	216	junction_6	299.364697688659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATTCTATGCATTAAG	47	False	NA	15	True	TATAAA	-21	NA	57173947	57264679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_148063.nnic	chr5	+	2867	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	1	350	junction_10	247.008381428379	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173824	57263085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_148064.known	chr5	+	4506	12	FSM	ENSG00000062194.16	ENST00000506184.7	4506	12	0	0	0	0	multi-exon	FALSE	canonical	1	350	junction_10	217.300911066689	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGTTATTCTATGC	2	True	NA	9	True	TATAAA	-15	NA	57174058	57264673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_148069.known	chr5	+	3310	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_2	315.489524390272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	-8	True	NA	10	True	AATAAA	-17	NA	57174048	57263587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_148092.nnic	chr5	+	988	2	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-123	-61156	at_least_one_novel_splicesite	FALSE	canonical	3	362	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAACTGGAAAATAAAGA	NA	False	NA	NA	False	AATAAA	-3	NA	57173824	57176333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447
transcript_148093.nic	chr5	+	1176	2	ISM	ENSG00000062194.16	ENST00000514387.6	3310	11	-127	87254	-26	-61156	5prime_fragment	FALSE	canonical	3	626	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAACTGGAAAATAAAGA	21	False	NA	NA	False	AATAAA	-3	NA	57173921	57176333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_57174212_57175447
transcript_148094.known	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	11.2006973578334	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-2	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
transcript_148098.known	chr5	-	625	2	FSM	ENSG00000145632.15	ENST00000504196.1	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTACCTTGCTTTTTCATT	-2	True	NA	NA	False	NA	NA	NA	58460086	58458864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_58459093_58459689
transcript_148099.nic	chr5	+	1070	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-92	-52	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	23.6682804614108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGTACGCATTCAATTCT	-7	True	NA	3	True	AATAAA	-13	NA	58582128	58851475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_148100.known	chr5	+	8861	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	19.8557296516648	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGCCTTAGTCTGAT	-11	True	NA	13	True	AATAAA	-25	NA	58583074	58859394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_148103.known	chr5	-	2969	11	FSM	ENSG00000113448.20	ENST00000358923.10	2969	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.88458491991101	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCACTCTTTCCAGAT	329	False	NA	NA	False	NA	NA	NA	59039512	58973771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_58975081_58975656_58975840_58976349_58976473_58977190_58977346_58988492_58988593_58989754_58989920_58990803_58990903_58991831_58992005_58993371_58993466_59038858_59038972_59039057
transcript_148107.known	chr5	-	2504	11	FSM	ENSG00000035499.13	ENST00000265036.10	2504	11	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_9	45.5407509819502	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	26	False	60700192	-3	True	AATAAA	-23	NA	60700166	60596911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_148109.known	chr5	-	1569	10	FSM	ENSG00000035499.13	ENST00000453022.6	1569	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	165.065493922717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGCCTTAGTTTTTA	-1	True	NA	NA	False	CATAAA	-24	NA	60700134	60597628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60597915_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_148112.known	chr5	-	3874	9	FSM	ENSG00000164181.14	ENST00000508821.6	3874	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	5.68853012649138	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGTATATTTTTCAT	7	True	NA	-1	True	AATAAA	-19	NA	60844269	60751790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60799179_60799231_60844159
transcript_148115.known	chr5	-	1949	13	FSM	ENSG00000049167.16	ENST00000675452.2	1949	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	53.9621137671813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTTAACTTTGTGAAAA	5	True	NA	NA	False	GGGGCT	-37	NA	60945049	60874036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924430_60928863_60928960_60944931
transcript_148116.known	chr5	-	9414	12	FSM	ENSG00000049167.16	ENST00000676185.1	9414	12	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_2	25.0862973363864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCAATAGAACTTTTT	-16	True	NA	NA	False	AATAAA	-30	NA	60945070	60866453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_148118.known	chr5	-	1248	10	FSM	ENSG00000049167.16	ENST00000683199.1	1248	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	17.9009621094634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATACTGTGCAACTT	391	False	NA	NA	False	AATGAA	-3	NA	60945030	60890703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_148119.known	chr5	-	2855	10	FSM	ENSG00000049167.16	ENST00000682246.1	2855	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	45.772383716725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTATCAGCAGGAAAAAAA	-10	True	NA	NA	False	AATAAA	-3	NA	60945064	60891687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60893644_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_148122.known	chr5	-	881	6	FSM	ENSG00000049167.16	ENST00000675229.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.7216351150314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	3	True	NA	0	True	ATTAAA	-18	NA	60945051	60903359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_148124.known	chr5	-	2095	13	FSM	ENSG00000049167.16	ENST00000643034.1	2095	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	54.4959223754911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGTGTCAACCCACAC	-10	True	NA	-16	True	AATAAA	-19	NA	60945064	60873832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924357_60928863_60928960_60944931
transcript_148125.known	chr5	+	632	4	FSM	ENSG00000164182.12	ENST00000296597.10	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_2	52.9591037184984	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-10	True	NA	28	True	AATAAA	-16	NA	60945204	61153026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_60945383_61073124_61073215_61098991_61099033_61152703
transcript_148127.known	chr5	+	2211	4	FSM	ENSG00000164182.12	ENST00000678452.1	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	277.777288888459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATGTGTCTTTATAGTA	26	True	NA	NA	False	AATAAA	-8	NA	60945176	61154531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_60945429_61073124_61073215_61098991_61099033_61152703
transcript_148129.nic	chr5	+	379	3	ISM	ENSG00000164182.12	ENST00000677932.1	4520	4	-79	27045	-33	-27045	5prime_fragment	FALSE	canonical	3	671	junction_2	60.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAGGAGGATATCATTTA	-7	True	NA	NA	False	AAGAAA	-29	NA	60945143	61099041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_60945383_61073124_61073215_61098991
transcript_148130.known	chr5	+	461	3	FSM	ENSG00000164182.12	ENST00000502658.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	380.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	120	False	NA	28	True	AATAAA	-16	NA	60945334	61153026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_60945383_61073124_61073215_61152703
transcript_148133.known	chr5	-	2888	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_2	0.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAGTATCCATGATAAC	-51	True	NA	1	True	AATAAA	-26	NA	61162468	61157703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_61160200_61161087_61161228_61162216
transcript_148138.known	chr5	+	7958	21	FSM	ENSG00000068796.19	ENST00000407818.8	7958	21	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	138.36657833451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	-7	True	NA	23	True	AATAAA	-19	NA	62306205	62391025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62372437_62372552_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_148139.known	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	80.0684264150811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	10	True	NA	23	True	AATAAA	-19	NA	62306451	62391025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_148141.known	chr5	+	2539	20	FSM	ENSG00000068796.19	ENST00000401507.7	2539	20	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	54.2672161431047	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTCCTTCACCTGA	5	True	NA	-37	True	NA	NA	NA	62306161	62385676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_148145.known	chr5	-	1656	13	FSM	ENSG00000086189.11	ENST00000680960.1	1656	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	171.470600006726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-11	True	NA	-18	True	AGTAAA	-17	NA	62403905	62388526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62399780_62399879_62402035_62402123_62403272_62403347_62403693
transcript_148146.known	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_6	21.066208106039	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-11	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_148149.known	chr5	-	1468	11	FSM	ENSG00000086189.11	ENST00000679751.1	1468	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	130.638432323723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-8	True	NA	-18	True	AGTAAA	-17	NA	62403902	62388526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62403272_62403347_62403693
transcript_148151.known	chr5	-	2784	11	FSM	ENSG00000086189.11	ENST00000680785.1	2784	11	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_5	22.0099977283052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	8845	False	NA	-18	True	AGTAAA	-17	NA	62403943	62388526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_148155.nic	chr5	+	1035	8	ISM	ENSG00000068796.19	ENST00000514082.6	1849	14	-60	6270	-16	2490	5prime_fragment	FALSE	canonical	3	292	junction_5	60.4999578343587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGGCACTTAATGAGCT	-11	True	NA	NA	False	AATAAA	-4	NA	62306145	62357744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690
transcript_148158.nic	chr5	+	479	6	ISM	ENSG00000068796.19	ENST00000676271.1	7541	20	-8	37701	-8	303	5prime_fragment	FALSE	canonical	3	139	junction_5	127.601567388493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGAGAAAAGGAGATTGCA	2	True	NA	29	True	AAGAAA	-3	NA	62306443	62353324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274
transcript_148159.known	chr5	+	1787	6	FSM	ENSG00000068796.19	ENST00000675085.1	1787	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	67.4999259258853	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTATTTCCTAGAAGAA	-7	True	NA	NA	False	NA	NA	NA	62306205	62354337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274
transcript_148160.known	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	128.052739651409	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-8	True	NA	-18	True	AGTAAA	-17	NA	62403902	62388526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
transcript_148161.known	chr5	+	1849	14	FSM	ENSG00000068796.19	ENST00000514082.6	1849	14	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	50.8544738916145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTTGTAATGTATAGT	-7	True	NA	NA	False	AATAAA	-19	NA	62306205	62364014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694
transcript_148162.known	chr5	+	4365	30	FSM	ENSG00000086200.17	ENST00000325324.11	4365	30	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	27.1873755412844	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTGATTTGTCTGA	-10	True	NA	15	True	ATTAAA	-19	NA	62412762	62628582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153
transcript_148164.known	chr5	+	1727	5	FSM	ENSG00000164197.12	ENST00000296615.10	1727	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.87082869338697	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATTAAAAAAA	-12	True	NA	NA	False	NA	NA	NA	64165843	64217786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360
transcript_148165.known	chr5	+	4451	6	FSM	ENSG00000186479.5	ENST00000334025.3	4451	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.47722557505166	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAATTCTGTCCG	-14	True	NA	NA	False	AAAACA	-19	NA	64506014	64612319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64506790_64507710_64507878_64575773_64575905_64594709_64594858_64598364_64598436_64609160
transcript_148169.known	chr5	-	6878	5	FSM	ENSG00000153006.16	ENST00000513458.9	6878	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	74.9645749671136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGTGTCTTGCTTTG	0	True	NA	-4	True	AATAAA	-42	NA	64768691	64718147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_64724574_64728106_64728180_64741056_64741201_64754314_64754363_64768504
transcript_14817.known	chr1	+	2056	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_3	29.6660814549021	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	4	True	NA	NA	False	AATAAA	-32	NA	155689090	155739010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_148174.known	chr5	+	612	4	FSM	ENSG00000145642.12	ENST00000506473.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	258.470286278498	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGATATAATTCAAGAA	25	False	NA	-5	True	AATGAA	-14	NA	64690531	64717963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64690815_64694086_64694183_64695506_64695665_64717888
transcript_148176.nnic	chr5	+	1562	4	NIC	ENSG00000145642.12	novel	846	4	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	247.065893145038	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTGTAATATTGCTTTT	-11	True	NA	19	True	AATAAA	-21	NA	64690409	64718090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_64691499_64694086_64694200_64695506_64695665_64717888
transcript_14818.known	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	92.5021020782171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	-4	True	NA	15	True	AATAAA	-11	NA	155689082	155738526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_148180.known	chr5	-	392	4	FSM	ENSG00000153006.16	ENST00000510616.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	286.933596654154	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	22	True	NA	NA	False	AATAAA	-23	NA	64768627	64741056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_64741201_64754314_64754363_64765044_64765122_64768504
transcript_148181.known	chr5	+	637	3	FSM	ENSG00000145642.12	ENST00000512767.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATCCACATTGCTTAT	734	False	NA	31	True	AAGAAA	-16	NA	64691240	64717999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64691609_64695506_64695665_64717888
transcript_148182.known	chr5	+	532	3	FSM	ENSG00000145642.12	ENST00000513930.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAACGGTTTGTAATA	812	False	NA	11	True	AATAAA	-13	NA	64691318	64718082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64691499_64695506_64695665_64717888
transcript_148183.known	chr5	+	772	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	95.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTCCTTTGTATA	-4	True	NA	16	True	ATTAAA	-16	NA	64690502	64718190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64690815_64695506_64695665_64717888
transcript_148184.nic	chr5	-	410	3	ISM	ENSG00000153006.16	ENST00000495198.6	816	4	-103	13386	-31	0	5prime_fragment	FALSE	canonical	3	458	junction_2	97	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	64768722	64741056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_64741201_64754314_64754363_64768504
transcript_148185.known	chr5	-	816	4	FSM	ENSG00000153006.16	ENST00000495198.6	816	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	84.0991478355558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGCTGAGGTGAGAGG	30	True	NA	NA	False	AAGAAA	-44	NA	64768619	64727670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_64728180_64741056_64741201_64754314_64754363_64768504
transcript_148187.known	chr5	+	2065	14	FSM	ENSG00000153015.17	ENST00000381070.8	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_11	57.743669444769	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAATATGGATGGGG	-14	True	NA	NA	False	AATAAA	-20	NA	64768929	65018750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_64977134_64977239_65018158
transcript_148192.known	chr5	+	2103	11	FSM	ENSG00000153015.17	ENST00000508024.2	3867	11	28	1736	0	22	multi-exon	FALSE	canonical	2	3	junction_10	202.354169712413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTCTCCTCTGGATCT	2	True	NA	4	True	AATAAA	-16	NA	64768945	64808562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64807598
transcript_148194.nic	chr5	+	1698	11	ISM	ENSG00000153015.17	ENST00000692763.1	7794	12	-493	14993	-467	-14993	5prime_fragment	FALSE	canonical	3	548	junction_6	55.5302620199113	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGAAAATGCAGCAAAACA	NA	False	NA	NA	False	ATTAAA	-32	NA	64768450	64885506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442
transcript_148195.nic	chr5	+	1101	10	ISM	ENSG00000153015.17	ENST00000485990.2	1181	12	2550	-8	0	8	3prime_fragment	FALSE	canonical	3	548	junction_6	49.1889779885246	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACAAGTGCGAATGTTA	NA	False	NA	44	True	ATTAAA	-4	NA	64768917	64804320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228
transcript_148196.nic	chr5	+	774	6	FSM	ENSG00000153015.17	ENST00000688564.1	1917	6	-15	1158	1	401	multi-exon	FALSE	canonical	3	601	junction_3	36.4779385382453	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACCAGAGGAGGAAGT	-19	True	NA	-23	True	ATTAAA	-13	NA	64768924	64786580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523
transcript_148200.known	chr5	-	1586	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	123.564112913095	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	21	True	NA	-55	True	NA	NA	NA	65563125	65517819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
transcript_148201.known	chr5	-	1731	11	FSM	ENSG00000123219.13	ENST00000396679.6	1731	11	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_9	59.9433065487716	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-22	True	NA	-1	True	AATAAA	-21	NA	65563168	65517765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_148202.known	chr5	-	1697	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_9	110.586843702133	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-22	True	NA	-1	True	AATAAA	-21	NA	65563168	65517765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
transcript_148204.nnic	chr5	-	1604	10	NIC	ENSG00000123219.13	novel	1731	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_8	137.105348339187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAGTGATGTGGGAT	NA	False	NA	-2	True	AATAAA	-20	NA	65563192	65517766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65561462_65561565_65563097
transcript_148207.nic	chr5	-	821	9	ISM	ENSG00000123219.13	ENST00000396679.6	1731	11	-24	10698	-24	0	5prime_fragment	FALSE	canonical	3	270	junction_7	63.1653336490832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAGGTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	65563192	65528463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_148210.nnic	chr5	-	1474	8	NIC	ENSG00000123219.13	novel	1731	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	160.561896005807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAGTGATGTGGGAT	NA	False	NA	-2	True	AATAAA	-20	NA	65563192	65517766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65561462_65561565_65563097
transcript_148216.known	chr5	-	1124	5	FSM	ENSG00000123219.13	ENST00000510354.1	1124	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	186.355842409086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTGCTGACCAGTTGT	1582	False	NA	1	True	AATAAA	-18	NA	65561564	65550466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65551243_65551563_65551637_65552492_65552550_65554796_65554947_65561496
transcript_148218.known	chr5	+	2019	12	FSM	ENSG00000113593.12	ENST00000510930.5	2019	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	160.957927873884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATACAATATTAA	7	True	NA	-56	True	AGTAAA	-26	NA	65563295	65587422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65563507_65563802_65563840_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_148219.known	chr5	+	2109	11	FSM	ENSG00000113593.12	ENST00000261308.10	2109	11	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_5	68.1119666431678	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	7	True	NA	23	True	ATTAAA	-20	NA	65563295	65587549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65563507_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_148234.nic	chr5	+	4046	13	NIC	ENSG00000123213.23	novel	8652	13	NA	NA	-44	1359	combination_of_known_junctions	FALSE	canonical	3	126	junction_9	258.55542872317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCATATTTCTTTCAT	NA	False	NA	NA	False	AATAAA	-23	NA	65722160	65824687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792602_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_148235.known	chr5	+	8652	13	FSM	ENSG00000123213.23	ENST00000380985.10	8652	13	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_12	77.6292828483914	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	-21	True	NA	NA	False	AATAAA	-20	NA	65722204	65829283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_148243.known	chr5	+	8354	12	FSM	ENSG00000123213.23	ENST00000502464.5	8354	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	282.582073209136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	17	True	NA	NA	False	AATAAA	-20	NA	65722242	65829283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65722415_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_148247.nic	chr5	+	772	4	ISM	ENSG00000123213.23	ENST00000506539.5	2637	9	-97	16114	-44	-8525	5prime_fragment	FALSE	canonical	3	920	junction_3	80.0055553626677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATGTTTTCTTTTC	NA	False	NA	13	True	AAGAAA	-33	NA	65722160	65777535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426
transcript_148248.known	chr5	+	2637	9	FSM	ENSG00000123213.23	ENST00000506539.5	2637	9	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_3	63.8318102516292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCCAAAAAACTGATAGT	32	True	NA	NA	False	AAAAAG	-5	NA	65722257	65793649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453
transcript_148249.known	chr5	+	1437	13	FSM	ENSG00000113597.18	ENST00000438419.6	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	47.1342644886805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	2	True	NA	9	True	ATTAAA	-16	NA	65625033	65664764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_148251.known	chr5	+	2910	13	FSM	ENSG00000113597.18	ENST00000399438.8	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	47.7237420531496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTATATTTTAATTA	-5	True	NA	115	True	AGTAAA	-18	NA	65625026	65666233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_148253.known	chr5	+	1410	12	FSM	ENSG00000113597.18	ENST00000505553.5	1410	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	26.2763445134923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTTATCTTGTAATT	13	True	NA	11	True	ATTAAA	-18	NA	65625044	65664766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_148255.known	chr5	+	2715	12	FSM	ENSG00000113597.18	ENST00000231526.8	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	27.7074444750656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTCTGTCTTTGTTTC	8	True	NA	7	True	AATAAA	-18	NA	65625039	65666069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_148258.known	chr5	-	3863	11	FSM	ENSG00000113595.15	ENST00000231524.14	3863	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	10.6512910015641	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGAAGTCCCATCAT	-16	True	NA	-21	True	AATAAA	-13	NA	65624333	65589689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
transcript_148259.known	chr5	-	5448	11	FSM	ENSG00000197860.10	ENST00000381007.9	5448	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	8.12403840463596	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTATTTGATTTAATG	8	True	NA	0	True	AATAAA	-23	NA	65722109	65665927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65670358_65671914_65671999_65672243_65672282_65680493_65680557_65680655_65680795_65685367_65685473_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65721916
transcript_148262.known	chr5	+	729	7	FSM	ENSG00000113597.18	ENST00000508304.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	7.24952105697718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATGTGTCTTGATTTT	37	False	NA	NA	False	NA	NA	NA	65625068	65652736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500
transcript_148264.known	chr5	+	1541	2	FSM	ENSG00000253251.3	ENST00000510585.3	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTAGTGCTAATTAT	-5	True	NA	NA	False	AATACA	-17	NA	65625026	65630928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65629467
transcript_148265.known	chr5	+	4257	25	FSM	ENSG00000112851.15	ENST00000511297.5	4257	25	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_17	37.8656249856721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCGGGGAAGACAGCAAGA	27	True	NA	NA	False	NA	NA	NA	65926726	66078546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044299_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66075023_66075231_66076315_66076409_66076874_66076950_66078422
transcript_148270.nic	chr5	+	2764	18	ISM	ENSG00000112851.15	ENST00000506030.5	4386	26	-1043	32185	-826	20403	5prime_fragment	FALSE	canonical	3	80	junction_3	9.92846385216101	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGTTGATGAAAGAGAA	-27	True	NA	-1	True	AGTAAA	-3	NA	65925729	66046380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352
transcript_148284.nic	chr5	+	1336	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-94	12987	-12	0	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTGAAAGAGAAAGACAGG	-32	True	NA	18	True	NA	NA	NA	66144205	66170628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_148285.nic	chr5	+	1519	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-90	12800	-8	0	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAGGACAAAGAAAAGG	-28	True	NA	-13	True	AAAAAG	-35	NA	66144209	66170815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_148286.nic	chr5	+	1587	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-82	12724	0	76	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAACACCACCCAGGAG	-20	True	NA	63	True	GATAAA	-4	NA	66144217	66170891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_148290.known	chr5	+	6699	12	FSM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	20.5663610444719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTTGAGTAGTAATT	-28	True	NA	19	True	AATAAA	-20	NA	66144299	66183615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
transcript_148292.known	chr5	+	6975	16	FSM	ENSG00000145675.15	ENST00000521381.6	6975	16	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_6	8.64612951299919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGGTTGAAATTTCAC	7	True	NA	25	True	AATAAA	-19	NA	68215755	68301821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_68215950_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_148294.nic	chr5	+	2125	12	ISM	ENSG00000145675.15	ENST00000521381.6	6975	16	-43	7209	-43	0	5prime_fragment	FALSE	canonical	3	26	junction_6	8.76412673090548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCGGTACAGCAAAGAAT	-36	True	NA	NA	False	CATAAA	-28	NA	68215712	68294612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_68215950_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535
transcript_148297.known	chr5	+	2625	10	FSM	ENSG00000145675.15	ENST00000320694.12	2625	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	12.7869532273918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTCAGAATTAAAACTA	2	True	NA	NA	False	AGTAAA	-29	NA	68288367	68298583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_68288752_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_148298.known	chr5	+	3891	16	FSM	ENSG00000145675.15	ENST00000521657.5	3891	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	12.4032253869709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATGAATATGACAAAG	27	True	NA	1	True	AATAAA	-17	NA	68215775	68298753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_68215954_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_148302.known	chr5	+	3992	16	FSM	ENSG00000145740.20	ENST00000396591.8	3992	16	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_14	27.371193291894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATATTGATGTTTT	-24	True	NA	16	True	ATTAAA	-21	NA	69094013	69131069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
transcript_148311.nic	chr5	+	3092	15	NIC	ENSG00000145740.20	novel	3992	16	NA	NA	-3	140	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	48.2521015720813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGCAAATGAATAATTA	-50	True	NA	24	True	AATAAA	-20	NA	69093987	69130266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69094339_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
transcript_148317.known	chr5	+	1317	4	FSM	ENSG00000145740.20	ENST00000380860.8	1317	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	75.4895136205464	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTATTTCTTCA	-47	True	NA	14	True	AATAAA	-16	NA	69093990	69104740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961
transcript_148318.known	chr5	+	681	3	FSM	ENSG00000145740.20	ENST00000502979.1	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	20.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGGCCCAGAATAAGAATA	160	False	NA	NA	False	NA	NA	NA	69094197	69104434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69094339_69103061_69103129_69103961
transcript_148325.known	chr5	+	2029	9	FSM	ENSG00000134057.15	ENST00000256442.10	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	5011	junction_3	250.308278678513	1085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCTTTTTTAAAAAGTT	0	True	NA	17	True	AATAAA	-20	NA	69167149	69178245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238_69177350_69177523
transcript_148353.known	chr5	+	1354	9	FSM	ENSG00000153044.10	ENST00000283006.7	1354	9	0	0	0	0	multi-exon	TRUE	canonical	3	643	junction_7	93.2690161575644	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTATTTTTTTTTA	12	True	NA	14	True	AATAAA	-15	NA	69189582	69210357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_148354.known	chr5	+	692	8	FSM	ENSG00000153044.10	ENST00000502689.1	692	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	286.972799678126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTAGTTATTTGTAGT	128	False	NA	26	True	NA	NA	NA	69189741	69209929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_148355.known	chr5	+	1315	4	FSM	ENSG00000134056.12	ENST00000256441.5	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_1	80.8991141278238	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATATGCTTT	0	True	NA	22	True	AATAAA	-20	NA	69217759	69230158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69217872_69226337_69226402_69228199_69228388_69229207
transcript_148359.known	chr5	+	1200	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	469.453819761741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCATAGGAATAAAGATT	15	True	NA	NA	False	AAAAAG	-33	NA	69217831	69229875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
transcript_14836.known	chr1	+	1470	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	101.206768140058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	4	True	NA	15	True	AATAAA	-11	NA	155689090	155738526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_148364.known	chr5	+	1426	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	42.187499617386	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATATAGTATCACAAATC	-5	True	NA	18	True	AATAAA	-30	NA	69234885	69277430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_148367.nic	chr5	+	1203	10	NIC	ENSG00000134058.12	novel	1426	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	178.941400160382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	-10	True	NA	19	True	AATAAA	-3	NA	69234846	69277305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69235042_69235393_69235454_69252417_69252452_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_148369.known	chr5	+	3054	19	FSM	ENSG00000152942.19	ENST00000354868.10	3054	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	70.9024934698838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	-10	True	NA	13	True	ATTAAA	-14	NA	69369817	69414801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69369934_69371034_69371172_69371453_69371558_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_14837.known	chr1	+	1894	12	FSM	ENSG00000132676.16	ENST00000535183.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	104.543003923847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	4	True	NA	NA	False	NA	NA	NA	155689090	155738971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_148370.known	chr5	+	2943	18	FSM	ENSG00000152942.19	ENST00000354312.7	2943	18	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	29.2714299103501	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	-3	True	NA	13	True	ATTAAA	-14	NA	69369824	69414801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69369934_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_148371.known	chr5	+	3057	18	FSM	ENSG00000152942.19	ENST00000616683.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	48.2435430536231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	12	False	NA	11	True	ATTAAA	-12	NA	69370059	69414799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69370285_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_148381.known	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	380.153258568173	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-9	True	NA	NA	False	TATAAA	-16	NA	69369520	69350983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
transcript_148382.known	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	373.43699267748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	NA	False	NA	-6	True	AATAAA	-17	NA	69370013	69351725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
transcript_148389.known	chr5	-	1057	3	FSM	ENSG00000273841.6	ENST00000508954.4	1705	3	0	648	0	-489	multi-exon	FALSE	canonical	3	53	junction_2	660	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCCATTGATCAAGCC	528	False	NA	NA	False	AAGAAA	-8	NA	69369465	69365431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69368824
transcript_148390.known	chr5	-	582	3	FSM	ENSG00000273841.6	ENST00000512152.6	996	3	0	414	0	-414	multi-exon	FALSE	canonical	3	31	junction_2	671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTGAAATCTTTACAGAA	34	True	NA	NA	False	NA	NA	NA	69369477	69365356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69369386
transcript_148391.known	chr5	-	1163	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	0	0	0	multi-exon	FALSE	canonical	3	1373	junction_1	204	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGTGCTTTGGCAGTT	-9	True	NA	-16	True	AATAAA	-17	NA	69369520	69364742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69369462
transcript_148392.known	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	657.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	NA	False	NA	-17	True	AATAAA	-16	NA	69370013	69364743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69369656
transcript_148393.known	chr5	+	4423	7	FSM	ENSG00000152939.17	ENST00000325631.10	4423	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	44.9175169987538	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	-2	True	NA	12	True	AATAAA	-25	NA	69415115	69444330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69415171_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_148398.nic	chr5	+	4798	7	NIC	ENSG00000152939.17	novel	1581	8	NA	NA	50	-118	intron_retention	FALSE	canonical	3	125	junction_1	21.674998398052	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGTGTGTGCCCTTT	59	False	NA	12	True	ATTAAA	-16	NA	69415176	69444212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_1484.nic	chr1	-	654	4	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-250	16478	-217	-193	5prime_fragment	FALSE	canonical	3	64	junction_3	14.290634073484	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGCATCATAGCCATTC	NA	False	NA	19	True	AAAAAG	-36	NA	1724574	1719358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1719456_1721595_1721712_1722707_1722832_1724257
transcript_148404.known	chr5	+	1908	6	FSM	ENSG00000152939.17	ENST00000512803.5	1908	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	23.2155120555201	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAGTAAAACAGTTT	119	False	NA	NA	False	AAGAAA	-6	NA	69415381	69440496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449
transcript_148414.known	chr5	+	6438	9	FSM	ENSG00000197822.12	ENST00000355237.6	6438	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	144.604417290759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	117	False	NA	9	True	NA	NA	NA	69492291	69558104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492660_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_148418.known	chr5	+	6181	9	FSM	ENSG00000197822.12	ENST00000396442.7	6181	9	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_3	34.0640481299566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	-9	True	NA	9	True	NA	NA	NA	69492789	69558104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_148424.known	chr5	+	3168	8	FSM	ENSG00000197822.12	ENST00000680784.1	3168	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	156.345770649545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	-9	True	NA	NA	False	NA	NA	NA	69492789	69555253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_148430.known	chr5	+	2903	5	FSM	ENSG00000197822.12	ENST00000680098.1	2903	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	195.87799136197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTGATTAAGCATATGC	-9	True	NA	7	True	AATAAA	-16	NA	69492789	69521815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69519982
transcript_148434.known	chr5	+	4555	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	132.188785454743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	69560190	69595221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_148438.nic	chr5	+	1582	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	0	279	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	117.990319753595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	-5	True	NA	NA	False	ATTAAA	-14	NA	69560208	69592525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_148441.known	chr5	+	2952	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	111.356604354359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	28	False	NA	NA	False	NA	NA	NA	69560241	69593767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_148456.known	chr5	+	1666	4	FSM	ENSG00000205572.10	ENST00000506542.1	1666	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	882.686807423788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCACTGTCTTGTC	61	False	NA	NA	False	NA	NA	NA	70025372	70043103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025459_70026406_70026516_70041523_70041632_70041740
transcript_148461.known	chr5	+	703	3	FSM	ENSG00000205572.10	ENST00000380751.9	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	67	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70025246	70032696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025459_70026406_70026516_70032314
transcript_148463.known	chr5	+	1907	3	FSM	ENSG00000205572.10	ENST00000380750.8	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	924	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	70025250	70043113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025459_70026406_70026516_70041523
transcript_148464.known	chr5	+	433	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	865.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTAAAAACTATTTTAA	275	False	NA	NA	False	NA	NA	NA	70025586	70032493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025732_70026406_70026516_70032314
transcript_148466.known	chr5	+	792	3	FSM	ENSG00000205572.10	ENST00000515588.1	792	3	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_2	125.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTGGGTTCAAGCAGT	222	False	NA	NA	False	NA	NA	NA	70025533	70042008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025732_70026406_70026516_70041523
transcript_148468.nic	chr5	+	690	2	ISM	ENSG00000205572.10	ENST00000503931.5	569	3	-115	3244	-6	363	5prime_fragment	FALSE	canonical	3	1899	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCTCATTTTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	70025240	70026878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_70025459_70026406
transcript_148470.known	chr5	+	1482	9	FSM	ENSG00000205571.14	ENST00000380743.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	450.583770652029	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	-1	True	NA	NA	False	AATAAA	-25	NA	70049668	70077595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520_70076575_70077018
transcript_148472.known	chr5	+	900	8	FSM	ENSG00000205571.14	ENST00000380741.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	393.274064484195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	16	False	NA	NA	False	AAAAAG	-45	NA	70049685	70076586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520
transcript_148474.known	chr5	+	1440	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	388.810535676518	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049653	70077592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
transcript_148475.known	chr5	+	1388	8	FSM	ENSG00000205571.14	ENST00000380742.8	1388	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	613.854898762479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	-6	True	NA	NA	False	AATAAA	-22	NA	70049663	70077592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520_70076575_70077018
transcript_148479.known	chr5	+	867	7	FSM	ENSG00000205571.14	ENST00000511812.5	867	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	623.670764283706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAATTTTGATGCCAA	NA	False	NA	NA	False	AAAAAG	-45	NA	70049637	70076706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70067293_70067447_70069234_70069331_70070640_70070752_70076520
transcript_148480.known	chr5	+	1550	9	FSM	ENSG00000205571.14	ENST00000506734.5	1550	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	633.371533935651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGTGATTGTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	70049656	70077596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071281_70071391_70077018
transcript_148488.known	chr5	+	1954	15	FSM	ENSG00000226259.10	ENST00000513202.5	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	106.164701655263	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	82	False	NA	NA	False	NA	NA	NA	70415442	70448015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70415551_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_148489.known	chr5	+	718	1	FSM	ENSG00000269983.1	ENST00000602697.1	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACTGATATATTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	70449635	70450353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70449600_70450400
transcript_148490.nnic	chr5	-	1559	7	NNC	ENSG00000196302.5	novel	418	4	NA	NA	-30600	35521	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	15.3776533392525	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCTCAAGAAACAAAA	286	False	NA	NA	False	AATAAA	-21	NA	70585866	70480865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_70481539_70516307_70516483_70518320_70518406_70522000_70522189_70555217_70555374_70556839_70556874_70585618
transcript_148497.known	chr5	+	699	3	FSM	ENSG00000172058.16	ENST00000317633.14	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	1901	junction_1	65	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900668	70908115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70900877_70901824_70901934_70907733
transcript_148500.known	chr5	+	663	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_1	863	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	248	False	NA	NA	False	AATAAA	-16	NA	70900977	70908115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70901150_70901824_70901934_70907733
transcript_148503.nic	chr5	+	690	2	ISM	ENSG00000172058.16	ENST00000504458.1	569	3	-115	3245	-10	375	5prime_fragment	FALSE	canonical	3	1901	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCTCATTTTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	70900658	70902296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_70900877_70901824
transcript_148506.known	chr5	+	1482	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_8	283.696333030584	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	-1	True	NA	NA	False	AATAAA	-25	NA	70925086	70953015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
transcript_148508.known	chr5	+	900	8	FSM	ENSG00000172062.17	ENST00000351205.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_7	248.900111101065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	16	False	NA	NA	False	AAAAAG	-45	NA	70925103	70952006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940
transcript_148512.known	chr5	+	1219	7	FSM	ENSG00000172062.17	ENST00000503079.6	1219	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	562.812481106175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCTCTAGTCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	70925029	70952347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70946065_70946177_70951940
transcript_148516.known	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_16	146.977676876456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	31	False	NA	NA	False	NA	NA	NA	71067650	71035075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
transcript_148520.nnic	chr5	-	1716	17	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_16	148.366101249578	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTGTAAGAAGAAAGTT	NA	False	NA	NA	False	ATTAAA	-35	NA	71067703	71035328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
transcript_148527.known	chr5	-	4336	16	FSM	ENSG00000145736.14	ENST00000274400.9	4336	16	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	135.961007482129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTTA	80	False	NA	NA	False	AATAAA	-24	NA	71067601	71032669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_148528.nic	chr5	-	1900	16	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_3	138.887228434519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	71067732	71035075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_148535.known	chr5	-	1953	15	FSM	ENSG00000145736.14	ENST00000519783.5	1953	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	134.680366128134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGCCACTGCACTCCAC	80	False	NA	NA	False	NA	NA	NA	71067601	71035015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061687_71061766_71062707_71062797_71067493
transcript_14854.known	chr1	-	2654	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	83.3863897767495	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-3	True	NA	-3	True	AATAAA	-29	NA	155688757	155659445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_148543.nic	chr5	-	1021	8	ISM	ENSG00000145736.14	ENST00000522654.5	1106	10	-15	6941	0	0	5prime_fragment	FALSE	canonical	3	164	junction_7	133.980199572739	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	-8	True	NA	NA	False	AATATA	-31	NA	71067689	71055029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_148544.known	chr5	-	860	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	143.187047641345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	-8	True	NA	NA	False	AATATA	-31	NA	71067689	71055029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_148546.nic	chr5	+	3217	17	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	35437	-42	-1310	5prime_fragment	FALSE	canonical	3	19	junction_8	3.69067659786116	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAAGAAACTGGAAGAA	NA	False	NA	NA	False	AATAGA	-7	NA	71455608	71510040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403_71489683_71490983_71491132_71495249_71495409_71497269_71497427_71501561_71501654_71502598_71502792_71504620_71504752_71509464
transcript_14855.known	chr1	-	2626	11	FSM	ENSG00000163374.20	ENST00000295566.8	2626	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	117.907124466675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-7	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
transcript_148551.nic	chr5	+	1659	10	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	55897	-42	-21770	5prime_fragment	FALSE	canonical	3	19	junction_8	3.77123616632825	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAGGAAGAAGCAAGAT	NA	False	NA	NA	False	AAGAAA	-2	NA	71455608	71489580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403
transcript_148553.nic	chr5	+	1474	9	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	58858	-42	-24731	5prime_fragment	FALSE	canonical	3	19	junction_8	4	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAAGGTATTGATTTTA	NA	False	NA	NA	False	AAGAAA	-21	NA	71455608	71486619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483
transcript_148557.nic	chr5	+	868	3	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	83551	-42	-49424	5prime_fragment	FALSE	canonical	3	31	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAATTTATTTCTG	NA	False	NA	NA	False	NA	NA	NA	71455608	71461926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816
transcript_148558.nic	chr5	+	671	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	86709	-42	-52582	5prime_fragment	FALSE	canonical	3	32	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACAGCCATGCTCAGA	NA	False	NA	-40	True	NA	NA	NA	71455608	71458768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578
transcript_148559.nic	chr5	+	758	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	86622	-42	-52495	5prime_fragment	FALSE	canonical	3	32	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAGGAGAATCAGGA	NA	False	NA	47	True	NA	NA	NA	71455608	71458855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578
transcript_148564.known	chr5	+	3621	17	FSM	ENSG00000131844.17	ENST00000682727.1	3621	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_10	114.211358344956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	-8	True	NA	-10	True	AATAGA	-3	NA	71587295	71658668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71636103_71636168_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_148565.known	chr5	+	3624	17	FSM	ENSG00000131844.17	ENST00000340941.11	3624	17	0	0	0	0	multi-exon	FALSE	canonical	1	81	junction_12	68.8548915746006	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	2	True	NA	28	True	AATAAA	-17	NA	71587339	71658706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_148567.known	chr5	+	3574	16	FSM	ENSG00000131844.17	ENST00000683789.1	3574	16	0	0	0	0	multi-exon	FALSE	canonical	1	81	junction_11	80.1053195625748	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	-4	True	NA	28	True	AATAAA	-17	NA	71587275	71658706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_148572.known	chr5	+	2587	10	FSM	ENSG00000131844.17	ENST00000510895.7	2587	10	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	48.8886363629842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAGATAAAAAT	-1	True	NA	NA	False	AATAAA	-6	NA	71587302	71636711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150
transcript_148574.known	chr5	+	1360	10	FSM	ENSG00000131844.17	ENST00000629193.3	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	68.9703819059088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTAGTTCTTTTTGTTTT	13	False	NA	18	True	AGTAAA	-15	NA	71587316	71641368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002
transcript_148575.nic	chr5	+	1950	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-139	14456	102	-205	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATGGTGAAAAAAGACA	2	True	NA	23	True	AAGAAA	-2	NA	72107335	72195109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_148576.nic	chr5	+	2283	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-276	14260	-35	-9	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAGAAAGAAAAGCCAAA	NA	False	NA	-44	True	AAAAAG	-31	NA	72107198	72195305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_148577.nic	chr5	+	2239	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-173	14201	68	50	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAGGAAAAACCAAAAA	NA	False	NA	15	True	AAAAAG	-21	NA	72107301	72195364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_148578.nic	chr5	+	2400	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-276	14143	-35	0	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAGAAAAAAGAACC	NA	False	NA	-49	True	AAAAAG	-37	NA	72107198	72195422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_148579.nic	chr5	+	2326	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-184	14125	57	0	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAGAAAGAGGTTAAGAA	NA	False	NA	-31	True	AAAAAG	-39	NA	72107290	72195440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_148580.nic	chr5	+	2527	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-276	14016	-35	109	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAGCTCCCTAAAGAC	NA	False	NA	-75	True	AAAAAG	-26	NA	72107198	72195549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_148582.known	chr5	+	11790	7	FSM	ENSG00000131711.15	ENST00000296755.12	11790	7	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	68.3780341597764	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGTGTGTGCTGTGCT	5	True	NA	11	True	AATAAA	-18	NA	72107474	72209565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865_72200368_72203562_72203802_72205083
transcript_148583.known	chr5	+	572	2	FSM	ENSG00000131711.15	ENST00000504183.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGTGTATATATATACA	7	True	NA	NA	False	NA	NA	NA	72107476	72116030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72107716_72115697
transcript_148585.known	chr5	-	2641	6	FSM	ENSG00000285804.2	ENST00000649991.1	2641	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.85472369909914	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTCGTAATTTGTTA	NA	False	NA	-1	True	AATAAA	-22	NA	72108000	72095854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72097971_72098278_72098438_72098757_72098915_72100922_72100999_72103577_72103635_72107924
transcript_148588.known	chr5	-	1369	12	FSM	ENSG00000113048.17	ENST00000513900.5	1369	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	293.425254818479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACAGCCTCAGCTTCC	3	True	NA	NA	False	NA	NA	NA	72320231	72220836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72241646_72241689_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_148596.known	chr5	-	2770	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	58.7676781913324	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCCACCACTAATATT	-6	True	NA	NA	False	ATTAAA	-25	NA	72320240	72219402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_148597.known	chr5	-	2628	11	FSM	ENSG00000113048.17	ENST00000457646.8	2628	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	229.636234074677	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	NA	False	NA	-5	True	AATAAA	-14	NA	72320255	72219527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
transcript_148600.nnic	chr5	-	2718	11	NNC	ENSG00000113048.17	novel	2770	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	33	junction_2	224.596170937975	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	-13	True	NA	-5	True	AATAAA	-14	NA	72320247	72219527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_72221149_72223682_72223917_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_14861.known	chr1	-	2723	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_10	59.3202326360914	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-20	True	NA	-11	True	AATAAA	-21	NA	155688774	155659453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_148612.known	chr5	-	486	5	FSM	ENSG00000113048.17	ENST00000520285.5	486	5	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	353.215497253447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTGTCAGAATTGTAC	43	False	NA	NA	False	AATAAA	-15	NA	72320191	72294553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72294789_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_148613.known	chr5	+	2195	11	FSM	ENSG00000049883.15	ENST00000308077.9	2195	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	26.4794259756514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGATTTCTCCACTT	-10	True	NA	NA	False	NA	NA	NA	72320372	72360225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359603
transcript_148614.known	chr5	+	11145	10	FSM	ENSG00000049883.15	ENST00000380639.10	11145	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	11.9422478600395	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTCCTTGAATT	-10	True	NA	5	True	AATAAA	-15	NA	72320372	72368395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_148616.known	chr5	+	2029	9	FSM	ENSG00000049883.15	ENST00000543322.5	2029	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	30.1662062579967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTCTGGTCACCAGTG	-16	True	NA	NA	False	AATATA	-17	NA	72320366	72359352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_148618.known	chr5	+	8489	25	FSM	ENSG00000083312.19	ENST00000337273.10	8489	25	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	36.9766959268492	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	-14	True	NA	19	True	AATAAA	-15	NA	72816660	72914388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_148620.known	chr5	+	3028	25	FSM	ENSG00000083312.19	ENST00000506351.6	3028	25	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	22.7437033410715	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTATTCAGTCT	13	False	NA	49	True	NA	NA	NA	72848183	72908951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_148623.known	chr5	+	11040	24	FSM	ENSG00000083312.19	ENST00000680533.1	11040	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_23	51.6997292428183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAAATGTTTGCAAACA	NA	False	NA	NA	False	AATAAA	-20	NA	72816311	72916733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72908708
transcript_148630.nic	chr5	+	3014	24	ISM	ENSG00000083312.19	ENST00000506351.6	3028	25	-94	3371	-31	0	5prime_fragment	FALSE	canonical	3	128	junction_1	23.1514288510448	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGGCTTTAAATTTAAA	1926	False	NA	40	True	AATAAA	-22	NA	72848089	72905580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
transcript_148632.known	chr5	+	8412	24	FSM	ENSG00000083312.19	ENST00000679378.1	8412	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	41.7566992010426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTTGTTTAACTATA	-12	True	NA	-1	True	AATAGA	-31	NA	72848120	72914368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_148643.known	chr5	+	4921	26	FSM	ENSG00000157107.14	ENST00000430046.7	4921	26	0	0	0	0	multi-exon	TRUE	canonical	2	59	junction_6	10.4079969254415	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGTTTATGTGTCTT	-15	True	NA	7	True	AATAAA	-19	NA	72956040	73090522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73041290_73041316_73051348_73051407_73052331_73052508_73054159_73054172_73054524_73054550_73056064_73056108_73058432_73058525_73063840_73063945_73068649_73068780_73074741_73074854_73077337_73077494_73078179_73078313_73081782_73081983_73082760_73082826_73087588_73087754_73088067
transcript_148647.known	chr5	+	1244	4	FSM	ENSG00000157111.13	ENST00000454765.7	1244	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	6.18241233033047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	3	True	NA	12	True	AATAAA	-14	NA	73120574	73131809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131537
transcript_148648.known	chr5	+	1247	4	FSM	ENSG00000157111.13	ENST00000287773.5	1247	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	5.71547606649408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	-3	True	NA	12	True	AATAAA	-14	NA	73120568	73131809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131540
transcript_148649.known	chr5	-	744	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGTCTTAACCATGAA	7070	False	NA	-11	True	AATAAA	-21	NA	73498293	73497549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_73497500_73498300
transcript_148651.known	chr5	+	1074	7	FSM	ENSG00000145741.17	ENST00000676862.1	1074	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2278.74217253486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCTGATAACCTTTGGAA	NA	False	NA	114	True	AGTAAA	-38	NA	73498407	73505580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73503936_73504029_73504346_73504404_73505191
transcript_148653.known	chr5	+	897	6	FSM	ENSG00000145741.17	ENST00000335895.12	897	6	0	0	0	0	multi-exon	FALSE	canonical	2	3711	junction_3	563.777828581437	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	NA	False	NA	29	True	AATAAA	-16	NA	73498407	73505495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_148655.known	chr5	+	1237	6	FSM	ENSG00000145741.17	ENST00000380591.8	1276	6	7	32	7	-32	multi-exon	FALSE	canonical	2	574	junction_1	1781.45102655111	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGGTATAAAGTTCT	8	True	NA	NA	False	ATTAAA	-26	NA	73498448	73505635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498800_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_148657.known	chr5	+	1177	5	FSM	ENSG00000145741.17	ENST00000514360.5	1177	5	0	0	0	0	multi-exon	FALSE	canonical	3	4783	junction_1	172.322916351831	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	1	True	NA	29	True	AATAAA	-16	NA	73498441	73505495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73503118_73504346_73504404_73505191
transcript_148659.known	chr5	+	5096	13	FSM	ENSG00000164338.10	ENST00000296792.9	5096	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	15.2285824101333	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGAGAAACCATCTT	-15	True	NA	15	True	AATAAA	-29	NA	73565742	73583380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73565913_73567261_73567435_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_148666.known	chr5	-	2161	9	FSM	ENSG00000164331.10	ENST00000296785.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	9.51232752800281	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTCATTTCTAGAAG	-12	True	NA	NA	False	AATAAA	-24	NA	73565639	73552189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562592_73562986_73565131
transcript_148668.known	chr5	-	2993	21	FSM	ENSG00000164347.18	ENST00000296805.8	2993	21	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_11	33.1200845409549	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	13	True	NA	-5	True	AATAAA	-16	NA	74767117	74721205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_148669.known	chr5	-	2856	20	FSM	ENSG00000164347.18	ENST00000345239.6	2856	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	68.6274215725008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	9	True	NA	-5	True	AATAAA	-16	NA	74767121	74721205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_148677.known	chr5	+	1812	14	FSM	ENSG00000049860.14	ENST00000261416.12	1812	14	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_8	50.2630947935446	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	0	True	NA	28	True	AATAAA	-19	NA	74685232	74721288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_148681.nic	chr5	+	1822	13	NIC	ENSG00000049860.14	novel	1812	14	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	135.716283924304	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	NA	False	NA	28	True	AATAAA	-19	NA	74685135	74721288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_148687.known	chr5	-	6118	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_12	65.3496471978915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	6	True	NA	-1	True	AATAAA	-14	NA	74866966	74777573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
transcript_14869.nic	chr1	-	2537	10	NIC	ENSG00000163374.20	novel	2626	11	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	118.674573186457	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	NA	False	NA	-11	True	AATAAA	-21	NA	155689050	155659453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_148691.nic	chr5	-	2491	13	FSM	ENSG00000198780.13	ENST00000687041.1	6125	13	-154	3788	-154	-3786	multi-exon	FALSE	canonical	3	173	junction_9	39.5217942687604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAAAATTTCAATTTGA	6	True	NA	-24	True	AATAAA	-24	NA	74866541	74781361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866164
transcript_148694.known	chr5	-	5908	12	FSM	ENSG00000198780.13	ENST00000510609.5	5908	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	67.5103909969568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGTGATTATAGATTA	30	True	NA	-3	True	AATAAA	-12	NA	74866344	74777575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74838964_74839051_74840073_74840174_74841544_74841680_74866164
transcript_148708.known	chr5	+	1684	6	FSM	ENSG00000049860.14	ENST00000513079.5	1684	6	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_3	31.359846938402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTGTTTTGAATAAAA	1	False	NA	-30	True	NA	NA	NA	74685195	74706168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218
transcript_14871.known	chr1	-	2524	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	111.367260299725	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-27	True	NA	-3	True	AATAAA	-29	NA	155688698	155659445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
transcript_148712.known	chr5	-	5657	4	FSM	ENSG00000171617.15	ENST00000618628.4	5657	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGTCTTCATTTG	10	True	NA	1	True	AATAAA	-25	NA	74641424	74627405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74629993_74634683_74636499_74637564_74637702_74640306
transcript_148714.known	chr5	-	4821	3	FSM	ENSG00000171617.15	ENST00000302351.9	4821	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGGGTCTTCAT	-1	True	NA	-2	True	AATAAA	-22	NA	74640728	74627408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74629993_74634683_74636499_74640306
transcript_148717.known	chr5	+	876	2	FSM	ENSG00000049860.14	ENST00000515528.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTTATATCATGCTT	-3	True	NA	NA	False	NA	NA	NA	74685205	74689849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74685560_74689327
transcript_148718.known	chr5	+	797	5	FSM	ENSG00000164346.10	ENST00000513356.1	797	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	210.807228291631	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACACTGTGAAACCC	13	True	NA	NA	False	NA	NA	NA	74767262	74771653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74771476
transcript_14872.known	chr1	-	2555	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	103.225511250076	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-7	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_148720.known	chr5	-	8012	18	FSM	ENSG00000113163.19	ENST00000644072.2	8012	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	39.3891067441724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTACTGTGGTTCT	-12	True	NA	0	True	AATAAA	-22	NA	75511629	75368485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75399309_75399388_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_148724.known	chr5	-	2036	17	FSM	ENSG00000113163.19	ENST00000642809.1	2036	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	39.4936703789354	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATAAAGCGAGCTTT	715	False	NA	-32	True	AATATA	-43	NA	75511302	75368517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75368659_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400292_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_148725.known	chr5	-	3154	17	FSM	ENSG00000113163.19	ENST00000645483.1	3154	17	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	18.1929759797566	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGAGTTTGACATTT	-16	True	NA	NA	False	TTTAAA	-6	NA	75511633	75373269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_148729.known	chr5	-	3961	16	FSM	ENSG00000113163.19	ENST00000642556.1	3961	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.0524162841724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGGGGGGTTGGGGAG	-21	True	NA	48	True	NA	NA	NA	75511638	75372330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75374192_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_148734.known	chr5	-	1327	8	FSM	ENSG00000113163.19	ENST00000646302.1	1327	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	9.4112394811432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATAAAGGAAAAATCTGAG	734	False	NA	NA	False	CATAAA	-7	NA	75511283	75410689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_148736.nic	chr5	-	1256	7	ISM	ENSG00000113163.19	ENST00000646302.1	1327	8	-342	6185	0	136	5prime_fragment	FALSE	canonical	3	114	junction_1	9.68532681717842	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTAGGTTTTTTTCCT	-8	True	NA	0	True	NA	NA	NA	75511625	75416874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_148738.known	chr5	-	1413	2	FSM	ENSG00000113163.19	ENST00000647127.2	1413	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAACCTCGACCTCCCAG	-20	True	NA	NA	False	NA	NA	NA	75511637	75505229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75506117_75511111
transcript_14874.known	chr1	-	2690	10	FSM	ENSG00000163374.20	ENST00000359205.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	114.997584515695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-20	True	NA	-3	True	AATAAA	-29	NA	155688774	155659445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155688070_155688202_155688658
transcript_148740.known	chr5	+	3395	20	FSM	ENSG00000113161.17	ENST00000511206.5	3395	20	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	155.99765606592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGATTTTGTAGTT	1733	False	NA	17	True	TTTAAA	-18	NA	75336328	75360758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75336618_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_148741.known	chr5	+	4530	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_12	58.2375972077476	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	-16	True	NA	15	True	AGTAAA	-25	NA	75337219	75362101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_148746.known	chr5	+	3681	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	145.221765280247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	-4	True	NA	19	True	AATAAA	-26	NA	75337231	75361423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_148752.known	chr5	+	5911	15	FSM	ENSG00000122008.15	ENST00000241436.8	5911	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	6.94732366616447	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTCGTTAACAAGATG	979	False	NA	NA	False	AATAAA	-20	NA	75511755	75601144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75511915_75547009_75547158_75552471_75552592_75569339_75569493_75573737_75573870_75576779_75576934_75581208_75581449_75583292_75583418_75584759_75584927_75587025_75587059_75590343_75590441_75593877_75594050_75596221_75597179_75597746_75597790_75597933
transcript_148755.known	chr5	-	2185	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.7849343156133	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAACACTAAATCAT	-27	True	NA	NA	False	TATAAA	-14	NA	75717437	75674123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_148760.nnic	chr5	-	1689	10	NNC	ENSG00000152359.15	novel	896	7	NA	NA	-24	3571	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	20.5035377856699	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGATTCTTTGCTGTCTG	NA	False	NA	-7	True	AATAAA	-19	NA	75717472	75686949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_75687329_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_148763.known	chr5	+	1209	6	FSM	ENSG00000189045.15	ENST00000673223.1	1209	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.67802782663136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAATCACACATTTTG	330	False	NA	NA	False	NA	NA	NA	75611805	75671636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75611828_75659282_75659382_75663393_75663490_75666791_75666994_75669251_75669384_75670978
transcript_148765.known	chr5	+	1028	5	FSM	ENSG00000189045.15	ENST00000672135.1	1028	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.31507290636732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCATGTTTTTTTAAAA	57	False	NA	NA	False	NA	NA	NA	75611532	75671314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75611828_75659282_75659382_75663393_75663490_75666791_75666994_75670978
transcript_148767.known	chr5	+	5808	36	FSM	ENSG00000145703.17	ENST00000274364.11	5808	36	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_14	28.9901320297449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTTAAGTTGTCTT	5	True	NA	20	True	AATAAA	-20	NA	76403284	76708132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025_76665176_76668680_76668845_76671758_76671984_76673448_76673590_76673951_76674037_76674476_76674710_76677217_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453_76695667_76697986_76698148_76701075_76701214_76702481_76702591_76707199
transcript_148769.nic	chr5	+	4966	33	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-347	9994	-347	2632	5prime_fragment	FALSE	canonical	3	203	junction_14	22.5948521515411	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGTAAGTTAAAA	-1	True	NA	NA	False	CATAAA	-19	NA	76402937	76698138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025_76665176_76668680_76668845_76671758_76671984_76673448_76673590_76673951_76674037_76674476_76674710_76677217_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453_76695667_76697986
transcript_148771.nic	chr5	+	2936	22	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-120	43081	-120	0	5prime_fragment	FALSE	canonical	3	203	junction_14	13.8801151426017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAGAAAAAAGGAGGAG	79	False	NA	NA	False	AGTAAA	-6	NA	76403164	76665051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025
transcript_148775.nic	chr5	+	1319	8	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-260	117567	-260	-10313	5prime_fragment	FALSE	canonical	3	224	junction_5	12.5405464842027	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAATGCAAGACTGAA	-10	True	NA	NA	False	AAAAAG	-7	NA	76403024	76590565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407
transcript_148778.nic	chr5	+	851	7	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-38	118492	-38	-11238	5prime_fragment	FALSE	canonical	3	224	junction_5	12.9700509722291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGAGAAATATGGAAT	6	True	NA	NA	False	NA	NA	NA	76403246	76589640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614
transcript_148782.known	chr5	+	3727	2	FSM	ENSG00000181104.7	ENST00000319211.5	3727	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTTGGAACAAATTAGT	-12	True	NA	NA	False	AATAAA	-20	NA	76716125	76735770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_76716396_76732313
transcript_148785.known	chr5	+	2861	2	FSM	ENSG00000164251.5	ENST00000296677.5	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTGTGCGTTTGT	-3	True	NA	10	True	TATAAA	-25	NA	76819029	76835315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_76819265_76832689
transcript_148790.known	chr5	+	1645	7	FSM	ENSG00000145708.11	ENST00000274368.9	1645	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.3879226322456	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGGGCTTTATTTGC	0	True	NA	5	True	AATAAA	-23	NA	76953044	76969471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_76953216_76953600_76953695_76954028_76954187_76955652_76955864_76958740_76958890_76963342_76963461_76968727
transcript_148791.known	chr5	+	4490	14	FSM	ENSG00000164252.13	ENST00000312916.12	4490	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	23.639551653254	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTTTAATCACACTAC	-15	True	NA	51	True	CATAAA	-22	NA	77030403	77065234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530_77039720_77046346_77046678_77048160_77048273_77048935_77048988_77052705_77052808_77053964_77054131_77055513_77055597_77059615_77059744_77061702_77061803_77063051
transcript_148795.nic	chr5	+	2095	11	ISM	ENSG00000164252.13	ENST00000312916.12	4490	14	-39	9661	-39	-9661	5prime_fragment	FALSE	canonical	3	131	junction_2	24.4346066062051	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAGTAAAATATGGTTTA	-54	True	NA	NA	False	ATTAAA	-6	NA	77030364	77055573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530_77039720_77046346_77046678_77048160_77048273_77048935_77048988_77052705_77052808_77053964_77054131_77055513
transcript_148799.nic	chr5	+	1239	5	ISM	ENSG00000164252.13	ENST00000312916.12	4490	14	-39	25548	-39	0	5prime_fragment	FALSE	canonical	3	131	junction_2	15.4495145554804	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGATTCTTCTGCAAC	-54	True	NA	NA	False	AGTAAA	-28	NA	77030364	77039686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530
transcript_148802.known	chr5	+	1741	4	FSM	ENSG00000250802.7	ENST00000643848.1	1741	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTCTGTCTCAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	77086714	77119644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_77086905_77087486_77087620_77098654_77098748_77118319
transcript_148805.known	chr5	-	3678	13	FSM	ENSG00000164253.14	ENST00000296679.9	3678	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	32.7951342935706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTCAGGCTCCAC	0	True	NA	-5	True	ATTAAA	-28	NA	77492316	77430932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_148810.known	chr5	-	1507	11	FSM	ENSG00000164253.14	ENST00000515253.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	102.303519001059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAGAAGTTTTATTAT	304	False	NA	-11	True	AATAGA	-22	NA	77492199	77432812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_148813.known	chr5	-	551	5	FSM	ENSG00000171530.15	ENST00000518338.6	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1088.57349315515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAATGAGTTCATCTA	224	False	NA	-55	True	NA	NA	NA	77776261	77691266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77691499_77693265_77693353_77705565_77705635_77708241_77708348_77776204
transcript_148814.known	chr5	-	661	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_2	67.726574465928	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATCTGTTAGGTTCTA	4	True	NA	46	True	ATTAAA	-25	NA	77776339	77691165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
transcript_148815.known	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_1	67.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	7	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77693353_77708241_77708348_77776204
transcript_148817.known	chr5	-	446	3	FSM	ENSG00000171530.15	ENST00000520361.5	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGTTTATTTTAT	1	True	NA	-36	True	AATAAA	-12	NA	77776293	77691247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77691499_77708241_77708348_77776204
transcript_148818.known	chr5	-	3986	27	FSM	ENSG00000132842.14	ENST00000519295.5	3986	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	58.4626644628405	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	2	True	NA	0	True	AATAAA	-18	NA	78294692	78002325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294439
transcript_148822.nic	chr5	-	2567	20	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-50	107880	-50	11516	5prime_fragment	FALSE	canonical	3	222	junction_4	25.1951936673152	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGATTATACATTTGTT	NA	False	NA	-1	True	NA	NA	NA	78294748	78110205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_148823.nic	chr5	-	2417	19	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-50	111427	-50	7969	5prime_fragment	FALSE	canonical	3	222	junction_3	25.7893293083174	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTTATTTTGTCAGAA	NA	False	NA	NA	False	AAAACA	-40	NA	78294748	78113752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_148824.nic	chr5	-	1029	8	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-50	179263	-50	-59867	5prime_fragment	FALSE	canonical	3	229	junction_2	25.820415905849	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCCGTATACTATGG	NA	False	NA	NA	False	NA	NA	NA	78294748	78181588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_148828.known	chr5	-	1479	2	FSM	ENSG00000245556.4	ENST00000421004.4	1482	2	0	3	0	-3	multi-exon	FALSE	canonical	3	58	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGCATGTATATTTA	576	False	NA	-3	True	ATTAAA	-20	NA	78360507	78358800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78359986_78360213
transcript_148830.known	chr5	+	6143	9	FSM	ENSG00000085365.18	ENST00000621999.5	6143	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_7	42.4144359269341	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGTACCTCTGCTAA	-4	True	NA	11	True	AATAAA	-22	NA	78360616	78480739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_148834.known	chr5	+	1358	8	FSM	ENSG00000085365.18	ENST00000618166.4	1358	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	138.536667215814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGATTGCACATTGG	-10	True	NA	NA	False	NA	NA	NA	78360610	78476026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_78360729_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_148839.known	chr5	-	4977	5	FSM	ENSG00000145685.14	ENST00000380345.7	4977	5	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	10.280442597476	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTATTCTTTCAAGTCTG	-21	True	NA	-15	True	ATTAAA	-18	NA	78648772	78485229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78489154_78509783_78510399_78564812_78564872_78632263_78632369_78648498
transcript_148842.nnic	chr5	-	4529	4	NIC	ENSG00000145685.14	novel	4977	5	NA	NA	-47	-3	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	154.183872913696	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTTATTCTTTCAAGT	NA	False	NA	-18	True	ATTAAA	-15	NA	78648942	78485232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_78489154_78564812_78564872_78632263_78632369_78648498
transcript_148846.known	chr5	-	4852	8	FSM	ENSG00000113273.17	ENST00000264914.10	4852	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10.3430939199417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATCATTGCCCTAAG	-10	True	NA	NA	False	AATAAA	-33	NA	78985310	78777208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78780663_78781851_78781975_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936
transcript_148849.nic	chr5	-	1791	7	ISM	ENSG00000113273.17	ENST00000396151.7	2316	8	655	210	-122	-210	3prime_fragment	FALSE	canonical	3	8	junction_1	44.3824915428996	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATACTTGTCTTACAGTA	9	True	NA	-19	True	AATAAA	-11	NA	78985432	78815720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78816115_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936
transcript_148850.known	chr5	+	2470	8	FSM	ENSG00000145692.15	ENST00000274353.10	2470	8	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_4	2.9277002188456	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTATTTTATTCT	-1	True	NA	NA	False	ATTAAA	-20	NA	79111808	79132288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754_79127984_79130932
transcript_148859.nic	chr5	+	2231	5	ISM	ENSG00000152409.9	ENST00000396137.5	9096	11	-18	26893	-18	-24879	5prime_fragment	FALSE	canonical	3	21	junction_2	5.84700778176325	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGCGTGCATTTAACCA	-10	True	NA	27	True	NA	NA	NA	79236112	79300318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152
transcript_148862.known	chr5	+	9096	11	FSM	ENSG00000152409.9	ENST00000396137.5	9096	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5.74543296888929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGATTTTGTTTGTT	8	True	NA	18	True	AATAAA	-20	NA	79236130	79327211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152_79300319_79300675_79300864_79306374_79306462_79312402_79312499_79314256_79314852_79315999_79316311_79321605
transcript_148863.known	chr5	-	5798	9	FSM	ENSG00000152413.15	ENST00000334082.11	5798	9	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	16.2307578381294	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATATCAAATGATTTT	1	True	NA	NA	False	NA	NA	NA	79514134	79372635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_79376198_79396822_79396904_79397526_79397638_79401898_79402056_79439009_79439150_79447052_79447146_79450989_79451122_79456861_79457019_79512769
transcript_148865.nic	chr5	-	2610	7	ISM	ENSG00000152413.15	ENST00000334082.11	5798	9	-467	24903	-467	-21609	5prime_fragment	FALSE	canonical	3	164	junction_3	16.1554944214035	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGAAGAGGTATTTGC	NA	False	NA	-13	True	ATTAAA	-35	NA	79514601	79397538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_79397638_79401898_79402056_79439009_79439150_79447052_79447146_79450989_79451122_79456861_79457019_79512769
transcript_148867.known	chr5	+	3129	16	FSM	ENSG00000164329.14	ENST00000296783.7	3129	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	46.7430802959706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-2	True	NA	11	True	AATAAA	-21	NA	79612572	79686648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_148874.known	chr5	+	5100	15	FSM	ENSG00000164329.14	ENST00000453514.6	5100	15	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	29.912798434852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCTCATGAAATGAATA	-11	True	NA	NA	False	AATAAA	-24	NA	79612440	79688246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_148878.nic	chr5	+	3114	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_6	28.7363099615118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	-17	True	NA	NA	False	AATAAA	-17	NA	79612434	79686266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_148879.nic	chr5	+	3496	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_6	28.7363099615118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-17	True	NA	11	True	AATAAA	-21	NA	79612434	79686648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_148884.known	chr5	-	7931	9	FSM	ENSG00000177034.17	ENST00000512528.3	7931	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	27.9463772249642	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGATTTAATGTTATTT	-9	True	NA	-10	True	AATAAA	-29	NA	79991262	79976715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_79983795_79985570_79985660_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_148887.known	chr5	+	3222	22	FSM	ENSG00000113296.14	ENST00000350881.6	3222	22	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_11	19.7499103014697	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	0	True	NA	22	True	AATAAA	-24	NA	80035347	80083287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80061694_80061833_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
transcript_148889.nnic	chr5	+	3084	21	NIC	ENSG00000113296.14	novel	3222	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_7	33.0170789137985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	0	True	NA	22	True	AATAAA	-24	NA	80035347	80083287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
transcript_148896.known	chr5	-	1441	13	FSM	ENSG00000164300.17	ENST00000509193.5	1441	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	34.0559180694862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTTACCCACCCCCTT	44	False	NA	NA	False	NA	NA	NA	80256019	80111650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80111703_80113571_80113626_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_1489.known	chr1	-	3235	12	FSM	ENSG00000008130.15	ENST00000341426.9	3235	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	134.989623108991	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-30	True	NA	NA	False	AATAAA	-20	NA	1778470	1751231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778288
transcript_148901.known	chr5	-	6448	12	FSM	ENSG00000164300.17	ENST00000507668.7	6448	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	15.2581098880357	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTTTTGAAATATGT	15	True	NA	-4	True	AATAAA	-24	NA	80256048	80138726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80143811_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_148912.nic	chr5	-	2492	7	ISM	ENSG00000164300.17	ENST00000507668.7	6448	12	-35	26184	-35	-7917	5prime_fragment	FALSE	canonical	3	87	junction_3	7.28964257620968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAAAAGTTATTTTAA	-20	True	NA	NA	False	NA	NA	NA	80256083	80164910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_148914.known	chr5	+	10805	19	FSM	ENSG00000039319.17	ENST00000505560.5	10805	19	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	24.0491395087457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGGGATTTTCAATGC	3	True	NA	NA	False	AATAAA	-16	NA	80408063	80483379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80408154_80427491_80427546_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_148915.known	chr5	+	6773	18	FSM	ENSG00000039319.17	ENST00000338008.9	6773	18	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.58011204072284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCTATTCAACAAACTT	-1	True	NA	119	True	AGTAAA	-20	NA	80408012	80479350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80408154_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_148925.known	chr5	-	4400	3	FSM	ENSG00000249042.6	ENST00000508000.6	4400	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	18	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATGTCTACAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	80488070	80479160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80483167_80485465_80485562_80487772
transcript_148933.known	chr5	+	4443	24	FSM	ENSG00000113318.11	ENST00000265081.7	4443	24	0	0	0	0	multi-exon	FALSE	non_canonical	3	78	junction_12	11.0725396461472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGGTATGTCCCATTG	-5	True	NA	14	True	AATAAA	-23	NA	80654651	80876815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732_80792845_80813583_80813742_80854129_80854317_80864812_80864943_80873115_80873288_80875750
transcript_148937.known	chr5	+	3295	24	FSM	ENSG00000113318.11	ENST00000658259.1	3295	24	0	0	0	0	multi-exon	FALSE	non_canonical	2	6	junction_1	22.8707224041836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACATTTGTGAACAAAAA	-2	True	NA	-40	True	ATTAAA	-7	NA	80655151	80875869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80655263_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732_80792845_80813583_80813742_80854129_80854317_80864812_80864943_80873115_80873288_80875750
transcript_148940.nic	chr5	+	2676	19	ISM	ENSG00000113318.11	ENST00000670357.1	4486	25	-31	83935	-31	31148	5prime_fragment	FALSE	non_canonical	3	78	junction_12	11.255725566337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAATAAAAAATGGAAGG	2317	False	NA	NA	False	AAGAAA	-7	NA	80654620	80792758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732
transcript_148942.nic	chr5	+	2650	18	ISM	ENSG00000113318.11	ENST00000670357.1	4486	25	-31	89021	-31	26062	5prime_fragment	FALSE	non_canonical	3	78	junction_12	11.5480042164905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATATTTTTCATTTTC	2317	False	NA	NA	False	NA	NA	NA	80654620	80787672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564
transcript_148944.nic	chr5	+	2323	15	ISM	ENSG00000113318.11	ENST00000670357.1	4486	25	-31	107727	-31	7356	5prime_fragment	FALSE	non_canonical	3	78	junction_12	12.5698050899765	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCTGCACAATATGTGA	2317	False	NA	NA	False	ACTAAA	-4	NA	80654620	80768966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834
transcript_148946.known	chr5	-	3919	6	FSM	ENSG00000228716.7	ENST00000439211.7	3919	6	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_1	47.848092960953	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCTCCTGTTGTTCTT	-4	True	NA	0	True	AATAAA	-22	NA	80654983	80626225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_148947.known	chr5	+	2842	10	FSM	ENSG00000113319.13	ENST00000638442.1	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	7.98609903380729	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTATGTTGTATTTTT	36	False	NA	41	True	ATTAAA	-32	NA	80960738	81088579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80961027_81042876_81042984_81068031_81068180_81070491_81070582_81073198_81073453_81080120_81080201_81080595_81080790_81085801_81085912_81086834_81086954_81087127
transcript_148948.known	chr5	-	909	3	FSM	ENSG00000247572.9	ENST00000505295.1	909	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATAGTGAGGGG	-4	True	NA	NA	False	NA	NA	NA	81301560	81244857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81245410_81246889_81246973_81301286
transcript_148950.known	chr5	-	601	2	FSM	ENSG00000247572.9	ENST00000512287.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAGCCCTTTTGTTAA	-3	True	NA	-25	True	ATTAAA	-16	NA	81301523	81235758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81236123_81301286
transcript_148953.known	chr5	-	2063	2	FSM	ENSG00000247572.9	ENST00000669977.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTAAAAAAGAAAATTTT	-9	True	NA	-50	True	AGTAAA	-1	NA	81301565	81237576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81239361_81301286
transcript_148954.known	chr5	+	1476	10	FSM	ENSG00000131730.16	ENST00000254035.9	1476	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.98556196500987	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTGTTTCTCTGA	-1	True	NA	NA	False	AATAAA	-16	NA	81233321	81266398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_148955.known	chr5	+	1372	6	FSM	ENSG00000131732.12	ENST00000380199.9	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	51.2288980947277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATTTTTCTGAATA	9	True	NA	31	True	AATAAA	-35	NA	81301623	81313154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301671_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_148957.known	chr5	+	1580	6	FSM	ENSG00000131732.12	ENST00000407610.8	1580	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	46.9442222216963	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	-3	True	NA	NA	False	AATAAA	-30	NA	81301586	81313297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301699_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_148959.known	chr5	+	1248	6	FSM	ENSG00000131732.12	ENST00000438268.2	1248	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	79.5854258014619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCTAGCACTATCATG	-5	True	NA	NA	False	AAAACA	-28	NA	81301640	81312662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81302056_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_148960.known	chr5	+	768	5	FSM	ENSG00000131732.12	ENST00000507402.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	79.2369863132111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAACCAAGTAGTTGTA	0	True	NA	NA	False	ATTAAA	-41	NA	81301589	81312917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301671_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_148961.known	chr5	+	818	5	FSM	ENSG00000131732.12	ENST00000506458.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	79.6692381035491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATGCATAAATGTAAAA	8	True	NA	NA	False	TATAAA	-6	NA	81301622	81312972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301699_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_148965.known	chr5	-	8780	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-156	217	0	-217	multi-exon	TRUE	canonical	3	145	junction_14	17.7935205903722	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGTATATAATTGAA	9648	False	NA	NA	False	CATAAA	-24	NA	81751253	81413020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_148968.nic	chr5	-	1737	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_14	48.2650526377259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	NA	False	NA	-39	True	AATAAA	-24	NA	81616628	81419935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
transcript_14897.known	chr1	-	3073	10	FSM	ENSG00000163374.20	ENST00000368339.9	3073	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	53.2897970453613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCAATTTGTTCAGT	15	True	NA	0	True	AATAAA	-32	NA	155688656	155659442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070
transcript_148970.known	chr5	-	4465	17	FSM	ENSG00000145687.17	ENST00000615665.4	4465	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	45.9197244520261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTCTTAACTACGT	9648	False	NA	NA	False	AATACA	-23	NA	81751253	81417359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_148973.known	chr5	+	1795	9	FSM	ENSG00000152348.16	ENST00000458350.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	43.3804031216862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	18	False	NA	25	True	ATTAAA	-26	NA	81972050	82254792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_148977.known	chr5	+	3029	8	FSM	ENSG00000152348.16	ENST00000282185.8	3029	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	23.7710164799446	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTGTTCTTGTCT	-10	True	NA	4	True	AATAAA	-17	NA	81972022	82256133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_14899.known	chr1	-	5097	20	FSM	ENSG00000116580.20	ENST00000471341.5	5097	20	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_19	42.497384635187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCACCTGACCATACT	-16	True	NA	NA	False	ATTAAA	-18	NA	155857217	155764783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
transcript_148993.known	chr5	+	1438	4	FSM	ENSG00000152348.16	ENST00000355178.8	1438	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	65.4285021140549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTATTTTTCTGTGAGT	-8	True	NA	NA	False	AATAAA	-20	NA	81972024	82148117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82147189
transcript_148996.known	chr5	-	595	4	FSM	ENSG00000186468.13	ENST00000503605.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_3	5426.75534325582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCCCTATACAAAG	485	False	NA	-113	True	NA	NA	NA	82278143	82276154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82277930
transcript_148997.known	chr5	-	3252	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	9445	junction_3	1326.67278055543	3055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGAGGTTTTGTCTGC	2	True	NA	-7	True	AATAAA	-17	NA	82278354	82273319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
transcript_148999.known	chr5	-	443	5	FSM	ENSG00000186468.13	ENST00000512493.5	443	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5015.16422961402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCTGATGTAAGAAAC	5	True	NA	NA	False	AATGAA	-18	NA	82278351	82275243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82275296_82276177_82276256_82276397_82276519_82277692_82277853_82278319
transcript_1490.known	chr1	-	3098	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	169.055177065247	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	8627	False	NA	NA	False	AATAAA	-20	NA	1778790	1751231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
transcript_149002.known	chr5	+	1243	8	FSM	ENSG00000152422.16	ENST00000542685.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	41.910497442984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	11	False	NA	21	True	AATAAA	-21	NA	83077556	83311069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_149003.known	chr5	+	1579	8	FSM	ENSG00000152422.16	ENST00000338635.10	1579	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	22.865177159397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACATAAACATTGTGAAAA	NA	False	NA	-32	True	AATATA	-11	NA	83077526	83353711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_149004.known	chr5	+	1636	8	FSM	ENSG00000152422.16	ENST00000511817.1	1636	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	38.1639855874405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGTTAACTTTTATTT	0	True	NA	44	True	AATAAA	-45	NA	83077592	83353787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_149007.known	chr5	-	4528	4	FSM	ENSG00000174695.10	ENST00000502346.2	4528	4	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_3	109.414603940953	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTACTTTTGTCTT	-21	True	NA	-9	True	AATAAA	-20	NA	83077394	83052845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077320
transcript_149011.known	chr5	-	596	3	FSM	ENSG00000174695.10	ENST00000504622.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTTTATAGAATGAGA	NA	False	NA	-84	True	NA	NA	NA	83077453	83056726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83057155_83061876_83061912_83077320
transcript_149014.known	chr5	+	2087	13	FSM	ENSG00000038427.16	ENST00000502527.2	2087	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	262.016578673946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTTTTCATCATTT	147	False	NA	NA	False	NA	NA	NA	83471924	83580448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
transcript_149021.known	chr5	+	8483	8	FSM	ENSG00000038427.16	ENST00000513016.5	8483	8	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_7	99.3907974223212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATTTTGTATAT	6990	False	NA	-96	True	AAAACA	-25	NA	83535613	83581336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
transcript_149024.nic	chr5	+	2688	7	ISM	ENSG00000038427.16	ENST00000512590.6	5923	14	-377	60811	-231	7411	5prime_fragment	FALSE	canonical	3	55	junction_6	120.882403829323	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAGAGAAAGAACAGAAA	240	False	NA	NA	False	NA	NA	NA	83471386	83520351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83519348
transcript_149026.known	chr5	+	3973	7	FSM	ENSG00000038427.16	ENST00000513960.5	3973	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	50.5887558872742	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAGAAAGTACAAA	-1	True	NA	NA	False	NA	NA	NA	83471776	83539684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006
transcript_149029.known	chr5	+	1825	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	15.9499216299015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTTCTAATCATTA	13	False	NA	NA	False	AATAAA	-29	NA	83471790	83512940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
transcript_14903.nic	chr1	-	824	4	ISM	ENSG00000116580.20	ENST00000471341.5	5097	20	0	57663	0	0	5prime_fragment	FALSE	canonical	3	68	junction_3	4.64279609239471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	-16	True	NA	NA	False	AAGAAA	-10	NA	155857217	155822446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_155822477_155826836_155827029_155853275_155853807_155857146
transcript_149030.known	chr5	-	4849	5	FSM	ENSG00000145681.11	ENST00000274341.9	4849	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.80788655293195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTCTTCTCTTTAGC	0	True	NA	NA	False	ATTAAA	-21	NA	83720855	83637804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83641786_83644362_83644666_83652452_83652825_83673423_83673550_83720788
transcript_149032.known	chr5	-	4814	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_9	64.6857016658241	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATTGTCTGAATGTGA	1	True	NA	-13	True	ATTAAA	-17	NA	84384880	83940553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_149034.known	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	34.5960819875443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-4	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
transcript_149038.known	chr5	+	347	3	FSM	ENSG00000127184.13	ENST00000515763.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6104.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	4	False	NA	29	True	AATAAA	-14	NA	86617972	86620766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_86618131_86619352_86619443_86620667
transcript_149039.known	chr5	+	629	3	FSM	ENSG00000127184.13	ENST00000247655.4	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	11882	junction_2	172.5	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTATTTCTATGA	5	True	NA	11	True	AATAAA	-18	NA	86617940	86620962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_86618131_86619352_86619497_86620667
transcript_149041.known	chr5	+	369	3	FSM	ENSG00000127184.13	ENST00000511472.5	369	3	0	0	0	0	multi-exon	TRUE	canonical	3	1032	junction_1	5425	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	-8	True	NA	29	True	AATAAA	-14	NA	86617927	86620766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_86618054_86619352_86619497_86620667
transcript_149042.known	chr5	-	1497	9	FSM	ENSG00000134480.16	ENST00000504878.1	1497	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	124.285709154351	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-3	True	NA	-11	True	AATAAA	-15	NA	87412904	87394273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412434
transcript_149043.known	chr5	-	1280	9	FSM	ENSG00000134480.16	ENST00000256897.9	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	28.6966897045635	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	91	False	87412958	-11	True	AATAAA	-15	NA	87412930	87394273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412677
transcript_149053.known	chr5	+	1700	6	FSM	ENSG00000247828.9	ENST00000504636.2	1700	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.8349136487695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	0	True	NA	11	True	AATAAA	-23	NA	88268995	88287657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88269467_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_149055.known	chr5	+	711	6	FSM	ENSG00000247828.9	ENST00000662970.2	715	6	0	4	0	-2	multi-exon	FALSE	canonical	3	10	junction_4	39.2295806758115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	-21	True	NA	7	True	AATAAA	-19	NA	88269014	88287653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_149058.known	chr5	+	553	5	FSM	ENSG00000247828.9	ENST00000668037.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	40.2018345352547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	28	False	NA	9	True	AATAAA	-21	NA	88269063	88287655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88287435
transcript_14906.nic	chr1	-	794	3	ISM	ENSG00000116580.20	ENST00000471341.5	5097	20	0	62053	0	33	5prime_fragment	FALSE	canonical	3	68	junction_2	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCTTTCTTTTTCTTTT	-16	True	NA	NA	False	NA	NA	NA	155857217	155826836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_155827029_155853275_155853807_155857146
transcript_149062.known	chr5	+	3379	4	FSM	ENSG00000247828.9	ENST00000658478.1	3379	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	28.5462587546755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGAATAAATCAATGT	-26	True	NA	NA	False	NA	NA	NA	88268890	88439332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88270525_88270586_88410072_88410195_88436272
transcript_149063.known	chr5	+	3315	4	FSM	ENSG00000247828.9	ENST00000671394.1	3315	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	28.0752955856608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAATGCAAGACCAGTG	-21	True	NA	NA	False	NA	NA	NA	88269014	88439300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88270525_88270586_88410072_88410195_88436272
transcript_149064.known	chr5	+	585	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	48	0	1	0	multi-exon	FALSE	canonical	3	29	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	-1	True	NA	41	True	AATAAA	-37	NA	88268915	88436685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88270525_88270586_88436272
transcript_149065.known	chr5	+	552	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	0	6	0	-1	multi-exon	FALSE	canonical	3	29	junction_2	30	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	-12	True	NA	24	True	AATAAA	-43	NA	88269023	88436668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88270525_88270586_88436272
transcript_149066.known	chr5	+	15798	6	FSM	ENSG00000247828.9	ENST00000670451.1	15798	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	17.9398996652713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAGGGATGCAAGCATA	-20	True	NA	NA	False	AATACA	-20	NA	88269015	88293988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88269467_88282107_88282714_88282867_88285740_88285852_88287435_88287623_88291383
transcript_149067.known	chr5	+	645	6	FSM	ENSG00000247828.9	ENST00000507736.2	645	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	39.7421690399505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	2	True	NA	11	True	AATAAA	-23	NA	88269037	88287657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269076_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_149068.known	chr5	-	1026	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	272.410425644835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAAATTTGTTTTTAT	-1	True	NA	0	True	AATAAA	-27	NA	90409757	90393709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_149070.known	chr5	-	2406	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	34.1275182221034	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAGTCTTCTGTGA	0	True	NA	NA	False	AATAAA	-19	NA	90409756	90392256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_149078.known	chr5	+	3290	8	FSM	ENSG00000113356.13	ENST00000651687.1	3290	8	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	154.865576997522	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTTAATGATTATTCA	4	True	NA	NA	False	AATAAA	-22	NA	90474863	90514557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_149080.known	chr5	+	3251	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	181.576767371213	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	-6	True	NA	NA	False	AATAAA	-18	NA	90474888	90514553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_149085.nic	chr5	+	693	7	ISM	ENSG00000113356.13	ENST00000651687.1	3290	8	-11	7986	-11	-5558	5prime_fragment	FALSE	canonical	3	545	junction_1	162.467090684715	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAGAAAGAAGGAAGCA	-7	True	NA	13	True	AAAAAG	-31	NA	90474852	90506571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527
transcript_149086.nic	chr5	+	683	7	ISM	ENSG00000113356.13	ENST00000504930.5	3251	8	-36	7982	-11	-5558	5prime_fragment	FALSE	canonical	3	457	junction_1	190.808804828289	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAGAAAGAAGGAAGCA	-7	True	NA	13	True	AAAAAG	-31	NA	90474852	90506571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527
transcript_149097.known	chr5	+	682	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	368.859804743693	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	0	True	NA	93	True	CATAAA	-20	NA	90474894	90490858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
transcript_149099.nic	chr5	+	632	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	-11	-82	combination_of_known_junctions	FALSE	canonical	3	120	junction_3	372.578701603955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACATTTATATGTGCC	-7	True	NA	11	True	AATAAA	-16	NA	90474852	90490776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
transcript_149102.known	chr5	-	4277	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATCTATAATTGATAT	4	True	NA	-32	True	AATAAA	-15	NA	90474771	90458208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90461553_90473838
transcript_149107.nnic	chr5	+	1532	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-78	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	36.9710311305641	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	NA	False	NA	13	True	AATAAA	-13	NA	90929161	91164215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_149108.nic	chr5	+	1537	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	36.9710311305641	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	NA	False	NA	13	True	AATAAA	-13	NA	90929241	91164215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_14911.known	chr1	+	1709	14	FSM	ENSG00000203761.5	ENST00000314835.5	1709	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	80.4261578337877	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCCAGTGTGGGAGAAA	12	False	NA	NA	False	NA	NA	NA	155745828	155750137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155745913_155746004_155746141_155746618_155746689_155746795_155746872_155747128_155747184_155747268_155747408_155747562_155747681_155747761_155747897_155747976_155748128_155748399_155748532_155748605_155748789_155749326_155749432_155749521_155749632_155749922
transcript_149112.known	chr5	+	2221	6	FSM	ENSG00000164199.18	ENST00000638316.1	2221	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.85657137141714	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATAAATAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	90558685	90626582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129
transcript_149116.known	chr5	-	4262	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	4	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCCAGTGAATTTAAT	-26	True	NA	-2	True	AATAAA	-23	NA	90529584	90515625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90519485_90525034_90525301_90529447
transcript_149121.known	chr5	+	2500	3	FSM	ENSG00000281357.4	ENST00000625713.2	2500	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGCTGTTCTAGATGC	-28	True	NA	NA	False	AATAAA	-21	NA	91380348	91420715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_91380925_91418708_91418772_91418854
transcript_149123.known	chr5	-	4239	8	FSM	ENSG00000113369.9	ENST00000265138.4	4239	8	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_4	15.2569823426548	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGGTAAGAATTGTATC	-7	True	NA	92	True	ATTAAA	-29	NA	91383317	91368630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_91371457_91373683_91373839_91374113_91374277_91374921_91375179_91375510_91375614_91376620_91376769_91378693_91378776_91382812
transcript_149127.known	chr5	-	591	2	FSM	ENSG00000237187.9	ENST00000607195.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGGAAAAGTATATTC	NA	False	NA	-16	True	AATAAA	-4	NA	93422423	93411032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_93411510_93422309
transcript_149129.known	chr5	-	4684	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	10.3266645147405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGAGTTTAAGTTGC	-9	True	NA	NA	False	AATAAA	-18	NA	94111663	93617724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_149131.known	chr5	-	1369	10	FSM	ENSG00000113391.19	ENST00000509163.5	1369	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	11.8112731252607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCGAGCGGACTC	-22	True	NA	NA	False	NA	NA	NA	94111676	93620928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94111510
transcript_149138.known	chr5	+	5583	21	FSM	ENSG00000133302.13	ENST00000265140.10	5583	21	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_7	11.9719463747546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGCTTTTCCCCATGC	-9	True	NA	NA	False	AATAAA	-29	NA	94618668	94697621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
transcript_149140.nic	chr5	+	930	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-26	45851	-26	-2981	5prime_fragment	FALSE	canonical	3	105	junction_5	7.1278015934477	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGGTTCCAGTAAAGA	302	False	NA	-65	True	AAAAAG	-6	NA	94618642	94651770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_149141.nic	chr5	+	1004	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-26	45777	-26	-2907	5prime_fragment	FALSE	canonical	3	105	junction_5	7.1278015934477	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAACTTTCCAAATTAA	302	False	NA	9	True	NA	NA	NA	94618642	94651844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_149142.nic	chr5	+	860	6	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-26	48025	-26	-5155	5prime_fragment	FALSE	canonical	3	105	junction_5	7.2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACTTTATAGGCTGAA	302	False	NA	NA	False	AATGAA	-34	NA	94618642	94649596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453
transcript_149144.known	chr5	-	5677	43	FSM	ENSG00000198677.12	ENST00000358746.7	5677	43	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_21	26.6015467642285	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTTATAGTGT	3	True	NA	-13	True	AATAAA	-15	NA	95554977	95463893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95464682_95467865_95467990_95469779_95469911_95478289_95478443_95482472_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963_95495018_95497415_95497489_95498369_95498592_95502879_95503004_95503813_95503939_95506933_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95516587_95516671_95516751_95516915_95517061_95517145_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_149149.nic	chr5	-	2551	21	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-41	53302	-41	-4064	5prime_fragment	FALSE	canonical	3	159	junction_8	19.5751756058534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAACAAGTATTAAA	NA	False	NA	NA	False	NA	NA	NA	95555018	95517195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_149153.nic	chr5	-	370	4	ISM	ENSG00000198677.12	ENST00000514952.5	2102	18	-41	25003	-41	-117	5prime_fragment	FALSE	canonical	3	174	junction_1	10.3708994574027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATACAAAGAAGCTTTGAA	NA	False	NA	NA	False	AAAAAG	-26	NA	95555018	95547090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_95547152_95548559_95548716_95550580_95550651_95554935
transcript_149154.known	chr5	+	3365	8	FSM	ENSG00000164291.17	ENST00000380009.9	3365	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	11.5475945016921	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGAATGGCCTTCTCC	-9	True	NA	47	True	NA	NA	NA	95555100	95605102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561_95586734_95591400_95591626_95600846_95601072_95603236
transcript_149158.known	chr5	+	2582	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	17.6113599702011	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAAATCTTCTCATC	13	True	NA	NA	False	AATAAA	-24	NA	95646776	95658082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_149161.known	chr5	+	615	5	FSM	ENSG00000175449.14	ENST00000511684.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	14.6692706021806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACACAGTGACAGTAGAC	-10	True	NA	NA	False	AATAAA	-9	NA	95646753	95656190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95646818_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_149163.known	chr5	+	2722	5	FSM	ENSG00000175449.14	ENST00000311364.8	2722	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	23.3291662945764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGAACTTTGTGAATGT	90	False	NA	8	True	AATAAA	-15	NA	95646853	95657140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95648075_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_149173.known	chr5	+	5370	12	FSM	ENSG00000164292.13	ENST00000379982.8	5370	12	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_7	69.4305051207487	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACGAAGTGTCCTGTA	-2	True	NA	75	True	AATAAA	-16	NA	95731335	95796361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238_95752351_95755395_95755762_95763507_95763621_95768045_95768167_95780251_95780426_95783796_95783964_95788761_95788859_95793058
transcript_149188.nic	chr5	+	1398	5	ISM	ENSG00000164292.13	ENST00000379982.8	5370	12	-432	44074	32	0	5prime_fragment	FALSE	canonical	3	680	junction_3	24.7828065400188	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAAAGAAAAATGAGC	NA	False	NA	1	True	NA	NA	NA	95730903	95752287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238
transcript_149191.known	chr5	-	932	3	FSM	ENSG00000173221.14	ENST00000237858.11	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	23	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTACAAATGGCT	0	True	NA	-12	True	AATAAA	-18	NA	95822726	95813848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95814390_95816506_95816627_95822455
transcript_149195.known	chr5	-	5826	12	FSM	ENSG00000118985.16	ENST00000237853.9	5826	12	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_10	22.9958673973254	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTACTTGTTTTTCCT	-7	True	NA	-8	True	AATAAA	-17	NA	95961851	95885097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913770_95913935_95919423_95919546_95943001_95943050_95961574
transcript_149198.known	chr5	-	5136	14	FSM	ENSG00000175426.11	ENST00000311106.8	5136	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.22527004511333	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATCTCCCTCTTTTATT	-11	True	NA	NA	False	AAAAAG	-20	NA	96433248	96390332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_96393379_96394863_96395026_96397335_96397470_96398878_96399037_96399952_96400187_96408222_96408324_96410773_96410987_96412317_96412491_96416032_96416122_96421879_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_1492.nic	chr1	-	3330	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	160.58555043423	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	9044	False	NA	NA	False	AATAAA	-20	NA	1780181	1751231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_149200.known	chr5	+	4490	32	FSM	ENSG00000153113.24	ENST00000675179.1	4490	32	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	51.0064777261792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	-5	True	NA	NA	False	ATTAAA	-22	NA	96662375	96774683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_149203.known	chr5	+	4330	31	FSM	ENSG00000153113.24	ENST00000674984.1	4330	31	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	32.8939204109209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATCAAGGCATAAAATACA	42	False	NA	NA	False	NA	NA	NA	96662422	96774636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_149208.known	chr5	+	4506	30	FSM	ENSG00000153113.24	ENST00000395812.6	4506	30	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	46.3525239914775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	-22	True	NA	NA	False	ATTAAA	-22	NA	96662236	96774683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_149209.known	chr5	+	4356	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	52.1305185389434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	-4	True	NA	NA	False	ATTAAA	-18	NA	96702788	96774679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_149210.known	chr5	+	2466	30	FSM	ENSG00000153113.24	ENST00000511782.5	2466	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.7663302373055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGAAAGAAAATGAATTTG	13	True	NA	-18	True	NA	NA	NA	96702805	96772786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96702916_96722638_96722719_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_149211.known	chr5	+	4282	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	31.961452388393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	8	True	NA	NA	False	ATTAAA	-22	NA	96702800	96774683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_149223.nic	chr5	+	1054	13	ISM	ENSG00000153113.24	ENST00000309190.9	4282	29	-14	31926	-2	948	5prime_fragment	FALSE	canonical	3	95	junction_1	32.9379677913229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACCTTAGAGTTGATT	-6	True	NA	23	True	NA	NA	NA	96702786	96742757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654
transcript_149228.known	chr5	+	1399	15	FSM	ENSG00000153113.24	ENST00000511097.6	1399	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	56.124678990946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTTTTAGCCACAGTG	7	True	NA	NA	False	ATTAAA	-11	NA	96662202	96746425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96741265_96741359_96741493_96741581_96742654_96742757_96746341
transcript_149236.known	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	24.5029602645965	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	1	True	NA	-1	True	AATAAA	-17	NA	97183247	97160866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_149241.known	chr5	+	4580	5	FSM	ENSG00000174136.13	ENST00000308234.11	4580	5	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_4	31.1367949538805	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTGTGATTATAG	4	True	NA	21	True	AATAAA	-22	NA	98769294	98796494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_98769626_98770597_98770674_98773952_98774207_98779579_98780089_98793084
transcript_149249.known	chr5	+	2513	4	FSM	ENSG00000174136.13	ENST00000434027.2	2513	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.622788017519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGAGGGAATTTTA	3	True	NA	8	True	AATAAA	-22	NA	98769293	98781185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_98769626_98770352_98770674_98773952_98774207_98779579
transcript_149251.known	chr5	+	4463	3	FSM	ENSG00000174136.13	ENST00000513185.3	4463	3	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_2	42.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTGTGATTATAG	-1	True	NA	21	True	AATAAA	-22	NA	98773662	98796494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_98774207_98779579_98780089_98793084
transcript_149252.known	chr5	-	8145	36	FSM	ENSG00000153922.11	ENST00000614616.5	8145	36	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_28	26.5430570498392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGCCTGTTTGCTTAT	-5	True	NA	NA	False	AATAAA	-16	NA	98929007	98853984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869753_98869883_98870686_98870804_98872050_98872202_98872416_98872556_98873592_98873724_98875071_98875114_98876397_98876559_98879551_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_149254.nic	chr5	-	3832	23	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	-30	25619	-30	1643	5prime_fragment	FALSE	canonical	3	195	junction_15	21.2499878463747	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTTGAAGAAATTTATA	0	True	NA	20	True	AAGAAA	-8	NA	98929037	98879603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_149255.nic	chr5	-	1691	8	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	-30	45536	-30	-16387	5prime_fragment	FALSE	canonical	3	207	junction_2	12.1990297372624	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGATAATTATAAGAAAAA	0	True	NA	NA	False	AAGAAA	-36	NA	98929037	98899520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_149257.nic	chr5	-	1249	7	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	-30	47083	-30	-17934	5prime_fragment	FALSE	canonical	3	207	junction_1	10.9645894689324	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGAAGATTCTTGGAC	0	True	NA	NA	False	NA	NA	NA	98929037	98901067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_149258.nic	chr5	-	1234	6	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	-30	47201	-30	-18052	5prime_fragment	FALSE	canonical	3	214	junction_3	9.97196068985433	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTCTCAGTTTGGTGC	0	True	NA	NA	False	AAAACA	-29	NA	98929037	98901185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_149259.nic	chr5	-	1696	2	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	57	71266	57	-42117	5prime_fragment	FALSE	canonical	3	217	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGATTGAGATGCTTC	-19	True	NA	NA	False	AATAAA	-13	NA	98928950	98925250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98926535_98928538
transcript_149260.known	chr5	+	1287	3	FSM	ENSG00000174132.9	ENST00000312637.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCAAATTATGTGTTT	19	True	NA	20	True	AATAAA	-23	NA	100535373	100586741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_100535965_100562053_100562189_100586180
transcript_149262.known	chr5	-	6321	5	FSM	ENSG00000113532.13	ENST00000231461.10	6321	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	10.7819293264239	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTATATCCATTTTAT	-11	True	NA	NA	False	AATAAA	-18	NA	100903282	100806932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_100812130_100856102_100856397_100886342_100886601_100895653_100895786_100902842
transcript_149266.known	chr5	-	5069	13	FSM	ENSG00000173930.9	ENST00000310954.7	5069	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	6.13901457890434	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTGTTTGAGCTTATT	8	True	NA	0	True	ATTAAA	-20	NA	102296284	102233985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_102237019_102239250_102239389_102240717_102240783_102247251_102247443_102249637_102249789_102257114_102257311_102257942_102258088_102260212_102260320_102261911_102262034_102263683_102263781_102270623_102270807_102291342_102291607_102295907
transcript_149267.known	chr5	-	944	2	FSM	ENSG00000250682.6	ENST00000510145.1	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAAGGAGGCAGAATG	NA	False	NA	NA	False	NA	NA	NA	102671559	102609155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_102609767_102671226
transcript_149271.known	chr5	+	3993	26	FSM	ENSG00000145730.21	ENST00000684529.1	3993	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_24	61.608129333717	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	2	True	NA	18	True	AATAAA	-18	NA	102755304	103029716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028181_103028239_103028886
transcript_149272.known	chr5	-	3549	8	FSM	ENSG00000145723.17	ENST00000399004.7	3549	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	8.59995253902424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-13	True	NA	0	True	AATAAA	-19	NA	103120138	103085999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_149273.known	chr5	-	1040	5	FSM	ENSG00000145723.17	ENST00000508629.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.8464187579497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTGACACATTCTTAA	28	False	NA	-2	True	ATTAAA	-18	NA	103120097	103087812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_103088173_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_149279.known	chr5	+	15407	30	FSM	ENSG00000145725.20	ENST00000321521.13	15407	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	43.0001244363988	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTAGTTGTTTATTT	NA	False	NA	7	True	AGTAAA	-22	NA	103120199	103212799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
transcript_149282.known	chr5	+	2988	3	FSM	ENSG00000181751.10	ENST00000319933.7	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	13.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	0	True	NA	10	True	AATAAA	-15	NA	103258762	103278660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103258897_103265907_103265998_103275896
transcript_149285.known	chr5	+	1573	3	FSM	ENSG00000181751.10	ENST00000515669.5	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	66	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGATACAAAGTATTTA	-10	True	NA	6	True	AATAAA	-7	NA	103259035	103277228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103259187_103265907_103265998_103275896
transcript_149286.known	chr5	+	2933	3	FSM	ENSG00000181751.10	ENST00000510890.1	2933	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	82	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTGTGTGGTGCTTT	-6	True	NA	17	True	AATAAA	-17	NA	103259423	103278371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103259792_103265907_103265998_103275896
transcript_149287.known	chr5	-	3488	7	FSM	ENSG00000112874.10	ENST00000230792.7	3488	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	13.0128141972954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	1	True	NA	-2	True	ATTAAA	-14	NA	103562789	103548854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
transcript_149288.known	chr5	-	1781	7	FSM	ENSG00000112874.10	ENST00000507423.1	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	25.491283913439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTGATGATGAAGAAA	1	True	NA	NA	False	CATAAA	-22	NA	103562789	103550507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560255_103562702
transcript_149291.known	chr5	-	436	1	FSM	ENSG00000272523.1	ENST00000606054.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAATCATTGCTCTTTGT	26	True	NA	-11	True	ATTAAA	-19	NA	108728260	108727824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_108727800_108728300
transcript_149298.known	chr5	-	4856	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_6	20.15556780595	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTCTAATATTTAATT	-7	True	NA	-18	True	AATAAA	-17	NA	109409974	109334721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
transcript_149306.known	chr5	+	6553	22	FSM	ENSG00000112893.10	ENST00000261483.5	6553	22	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	44.5094705711216	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCCTCTAGAGTAGTT	-1	True	NA	18	True	AATAAA	-19	NA	109689926	109869625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668_109819888_109820219_109820343_109823722_109823838_109842327_109842462_109845864_109846007_109847656_109847791_109855139_109855335_109865035_109865147_109866845
transcript_149320.known	chr5	+	4745	8	FSM	ENSG00000164209.17	ENST00000355943.8	4745	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	25.1777355484352	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTTTTTCTCCTACT	-13	True	NA	10	True	AATAAA	-14	NA	110739006	110765157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203
transcript_149322.nic	chr5	+	993	5	ISM	ENSG00000164209.17	ENST00000447245.6	1575	8	-61	13711	-27	-8478	5prime_fragment	FALSE	canonical	3	193	junction_3	10.4970233876085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTATATATTATTAAAT	821	False	NA	NA	False	AATAAA	-2	NA	110738979	110748553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162
transcript_149324.known	chr5	+	6416	23	FSM	ENSG00000134987.13	ENST00000513710.4	6416	23	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	30.7536532802632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTTTACTTTTGTTA	0	True	NA	9	True	AATAAA	-16	NA	111092347	111130502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169_111111279_111113073_111113154_111119012_111119121_111120495_111120594_111120995_111121142_111123804_111123925_111124107_111124190_111125607_111125796_111126733
transcript_149331.known	chr5	+	562	2	FSM	ENSG00000134987.13	ENST00000515784.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTCATTTAGAATGT	-1	True	NA	NA	False	NA	NA	NA	111092346	111095209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111092619_111094919
transcript_149332.known	chr5	+	11942	11	FSM	ENSG00000152495.11	ENST00000282356.9	11942	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.96816441593117	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTCTGTGATTTCA	-8	True	NA	8	True	AATAAA	-22	NA	111224383	111494886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111224645_111344023_111344103_111374849_111374913_111376859_111376943_111394709_111394783_111446685_111446777_111449128_111449204_111473310_111473387_111478380_111478508_111482784_111482938_111484025
transcript_149338.known	chr5	-	803	6	FSM	ENSG00000164211.13	ENST00000505803.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	84.2624471517413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATACATTCAAACTTGT	-1	True	NA	NA	False	NA	NA	NA	111512562	111499881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512390
transcript_149344.known	chr5	-	1135	5	FSM	ENSG00000164211.13	ENST00000511137.5	1135	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	102.691284927203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAATTTAAAATGTGGAA	-19	True	NA	NA	False	NA	NA	NA	111512535	111499401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111500107_111501001_111501117_111506329_111506380_111507328_111507443_111512384
transcript_149347.known	chr5	-	838	4	FSM	ENSG00000164211.13	ENST00000502931.5	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	81.6183530558878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCTGAATAGCTGGGA	-19	True	NA	NA	False	NA	NA	NA	111512535	111499584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111500107_111501001_111501117_111506329_111506380_111512384
transcript_149349.known	chr5	-	2581	5	FSM	ENSG00000134986.14	ENST00000379671.7	2581	5	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_4	555.901969775247	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTCATTAAGGCTTA	11	True	NA	NA	False	GATAAA	-15	NA	111757724	111728811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757561
transcript_14935.known	chr1	+	5182	4	FSM	ENSG00000132718.9	ENST00000368324.5	5182	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.2836838484589	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGTCAGCCTGATTC	4	True	NA	17	True	AATAAA	-24	NA	155859566	155885199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155859796_155867964_155868792_155880499_155880624_155881197
transcript_149350.known	chr5	-	475	5	FSM	ENSG00000134986.14	ENST00000508161.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	774.191675232949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGTGAACCGCAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	111758203	111731026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757931
transcript_149351.known	chr5	-	698	5	FSM	ENSG00000134986.14	ENST00000455559.6	698	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	708.93630708266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCTTGCTTTAGAGAA	NA	False	NA	-32	True	AAGAAA	-11	NA	111758218	111730805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757944
transcript_149352.known	chr5	-	540	5	FSM	ENSG00000134986.14	ENST00000508870.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	820.713561481714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCATATATGGGATTTT	425	False	NA	-16	True	NA	NA	NA	111757643	111730867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755927_111757135_111757180_111757561
transcript_149353.known	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1610	junction_3	147.741516018875	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-6	True	NA	-14	True	AATAAA	-20	NA	111757194	111729302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
transcript_149356.known	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	940	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	839	False	NA	NA	False	NA	NA	NA	111757229	111730641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111757135
transcript_149357.known	chr5	-	4670	23	FSM	ENSG00000129595.14	ENST00000261486.6	4670	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	3.96054925650763	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATTTGTCGTTTCCTGC	-4	True	NA	-1	True	AATAAA	-20	NA	112419277	112162618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_112165119_112168738_112168821_112168994_112169106_112170300_112170370_112170944_112170993_112184015_112184136_112194567_112194646_112195660_112195709_112204374_112204489_112205420_112205505_112209891_112209983_112234633_112234756_112239659_112239738_112240718_112240811_112259228_112259293_112259890_112259980_112262493_112262582_112264895_112265017_112266232_112266331_112275325_112275405_112280271_112280324_112307385_112307491_112418940
transcript_149358.known	chr5	+	3511	3	FSM	ENSG00000224032.8	ENST00000663232.1	3511	3	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	28	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGATAACATCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112160525	112164818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112161296_112161702_112161776_112162150
transcript_149359.known	chr5	+	2621	3	FSM	ENSG00000224032.8	ENST00000413221.7	2621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATGCAGTCTGAAAG	1	True	NA	NA	False	AATAAA	-28	NA	112160871	112164257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112161296_112161685_112161776_112162150
transcript_149360.known	chr5	+	292	3	FSM	ENSG00000224032.8	ENST00000508590.2	366	3	70	4	62	1	multi-exon	FALSE	canonical	2	33	junction_1	215.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTGTTTTAAGTGA	32	False	NA	36	True	AATAAA	-17	NA	112160933	112162311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112160992_112161702_112161776_112162150
transcript_149366.nic	chr5	+	3546	16	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	-3	-297	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	8.33466656001706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAGAAGATGAAATAAAA	9	True	NA	NA	False	AATGAA	-23	NA	112707517	112838757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112818965_112819345_112821895_112821992_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
transcript_149369.nic	chr5	+	778	5	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	66	8349	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	11.7898261225516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTATTACGCTCAACT	-27	True	NA	NA	False	AAGAAA	-9	NA	112707587	112775671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_149371.known	chr5	+	524	4	FSM	ENSG00000134982.17	ENST00000509732.5	524	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	24.9977776790036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAGAGGGTTTGTAAA	-11	True	NA	NA	False	NA	NA	NA	112707497	112767322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112707650_112754872_112755026_112766325_112766411_112767188
transcript_149374.known	chr5	+	937	5	FSM	ENSG00000153037.15	ENST00000282999.7	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	305.142077563878	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGGAGAGGAGGGATAAT	-2	True	NA	56	True	AATAAA	-41	NA	112861304	112867935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867371
transcript_149376.known	chr5	+	2776	5	FSM	ENSG00000153037.15	ENST00000505459.6	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_3	338.070258969937	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAAGGTGCCTGC	-20	True	NA	NA	False	NA	NA	NA	112861286	112869788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867403
transcript_149378.known	chr5	-	3008	5	FSM	ENSG00000129625.13	ENST00000379638.9	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_1	25.7342184649155	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATTTCATTTTATT	29	True	NA	-12	True	AATAAA	-32	NA	112922227	112876384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112922072
transcript_149385.known	chr5	+	1270	4	FSM	ENSG00000153037.15	ENST00000621420.5	1270	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	739.573901348307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTGTTTGTTTGTTTG	18	True	NA	1	True	AGTAAA	-13	NA	112861324	112868392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864620_112864733_112867403
transcript_149387.known	chr5	+	631	3	FSM	ENSG00000153037.15	ENST00000515755.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	1060	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATGAGACCCACTAAAC	19	True	NA	NA	False	NA	NA	NA	112861325	112864919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864456
transcript_14939.known	chr1	-	2419	7	FSM	ENSG00000143622.11	ENST00000651853.1	2419	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.127660648068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGAGTAGTGGTCCCT	-12	True	NA	-93	True	GATAAA	-37	NA	155911404	155898836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155900619_155904310_155904503_155904602_155904606_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_149393.known	chr5	-	8295	19	FSM	ENSG00000171444.18	ENST00000408903.7	8295	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	40.5887231191675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTACCTTAACTGTGTT	-16	True	NA	-7	True	AATAAA	-15	NA	113488453	113022105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113340518_113340731_113384967_113385213_113488244
transcript_149398.known	chr5	-	8257	17	FSM	ENSG00000171444.18	ENST00000302475.8	8257	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_16	15.119833828452	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAACTGTGTTATTTAAA	-3	True	NA	0	True	AATAAA	-22	NA	113294949	113022098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113294328
transcript_149399.nic	chr5	-	4614	17	NIC	ENSG00000171444.18	novel	8257	17	NA	NA	-42	888	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	19.7443623282698	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTCACTATTTTTCC	1295	False	NA	NA	False	AAAACA	-22	NA	113203359	113025243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
transcript_149402.nic	chr5	-	2411	17	NIC	ENSG00000171444.18	novel	8257	17	NA	NA	-42	-1315	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	19.7443623282698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATCAAAACAAACTGAAGA	1295	False	NA	NA	False	AAGAAA	-3	NA	113203359	113027446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
transcript_149408.known	chr5	-	857	6	FSM	ENSG00000171444.18	ENST00000506605.6	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	30.261526729496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGCATCCATAATGGT	-2	True	NA	NA	False	NA	NA	NA	113203317	113101733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
transcript_149409.nic	chr5	-	2659	6	ISM	ENSG00000171444.18	ENST00000514701.5	2855	14	-4	51589	-4	1035	5prime_fragment	FALSE	canonical	3	66	junction_5	21.1603402619145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAATACATCTAGTGG	4	True	NA	NA	False	NA	NA	NA	113294942	113100464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113294328
transcript_14941.known	chr1	-	3390	6	FSM	ENSG00000143622.11	ENST00000368323.8	3390	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	14.8539557021017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCTTTCCTTTGCTTC	1	True	NA	-23	True	AATACA	-15	NA	155911349	155897807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_149411.known	chr5	-	744	2	FSM	ENSG00000171444.18	ENST00000511242.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAGATTTAATGTGCGT	3	False	NA	NA	False	NA	NA	NA	113488823	113448122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_113448288_113488244
transcript_149412.nnic	chr5	+	2004	12	NNC	ENSG00000172795.17	novel	4679	12	NA	NA	14	844	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_11	76.9785845501127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCTGGTTTTCTGCTAC	-8	True	NA	27	True	AATAAA	-32	NA	112976723	113020967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320_113013393_113020344
transcript_149413.known	chr5	+	10110	11	FSM	ENSG00000172795.17	ENST00000389063.3	10110	11	0	0	0	0	multi-exon	FALSE	canonical	2	184	junction_10	35.5589651142999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATATCAAATAACGCAA	0	True	NA	NA	False	AATAAA	-20	NA	112976797	113022195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_149417.known	chr5	+	8029	10	FSM	ENSG00000172795.17	ENST00000515408.5	8029	10	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_8	85.877317029859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGCAAATTATTTTGAG	NA	False	NA	NA	False	AAAAAG	-25	NA	112976701	113020123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113010755_113010808_113013320
transcript_149419.nic	chr5	+	1220	9	ISM	ENSG00000172795.17	ENST00000389063.3	10110	11	-74	14190	14	0	5prime_fragment	FALSE	canonical	2	216	junction_2	27.3355880675723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTCAGCCAGCAAAGC	-8	True	NA	NA	False	AAGAAA	-9	NA	112976723	113008005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937
transcript_149422.nic	chr5	+	1525	4	ISM	ENSG00000172795.17	ENST00000502635.2	1302	10	14	14352	14	7643	intron_retention	FALSE	canonical	2	216	junction_2	26.4491125665032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATTTTTTTTACTGTT	-8	True	NA	NA	False	NA	NA	NA	112976723	112993653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671
transcript_149423.nnic	chr5	+	1059	3	NIC	ENSG00000172795.17	novel	852	2	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	4	True	NA	13	True	ATTAAA	-14	NA	112976735	112984651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_112976987_112981041_112981172_112983973
transcript_149424.known	chr5	+	852	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	15	True	NA	13	True	ATTAAA	-14	NA	112976812	112984651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112983973
transcript_149425.known	chr5	+	6305	30	FSM	ENSG00000047188.16	ENST00000161863.9	6305	30	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	16.071555215325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCAGATCTTATTTCT	-4	True	NA	15	True	ATTAAA	-16	NA	113513693	113595284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079_113561186_113563372_113563493_113563858_113564132_113565892_113566020_113567091_113567298_113567653_113567850_113579585_113579696_113581416_113581710_113584301_113584480_113591040_113591245_113591995_113592179_113593302_113593391_113593481
transcript_149430.nic	chr5	+	1416	8	ISM	ENSG00000047188.16	ENST00000515883.5	2629	17	-26	17186	-11	12471	5prime_fragment	FALSE	canonical	3	88	junction_3	20.5177872061471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAGGTAAATTTTTTAA	-15	True	NA	NA	False	TATAAA	-10	NA	113513682	113539174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073
transcript_149432.nic	chr5	+	1019	6	ISM	ENSG00000047188.16	ENST00000503857.5	2138	16	-11	22022	-11	12471	5prime_fragment	FALSE	canonical	3	9	junction_2	47.9307834277722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAGGTAAATTTTTTAA	-15	True	NA	NA	False	TATAAA	-10	NA	113513682	113539174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_113514083_113515271_113515363_113532878_113533046_113534304_113534408_113535641_113535799_113539073
transcript_149437.nnic	chr5	+	3207	9	NNC	ENSG00000080709.16	novel	2760	8	NA	NA	-719	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.5466496684612	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTCGTTTGGTCACTTG	NA	False	NA	4	True	AATAAA	-18	NA	114361350	114496496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_114362212_114362483_114363262_114363905_114364002_114404437_114404857_114463048_114463191_114473053_114473165_114487049_114487178_114493402_114493473_114495894
transcript_14944.known	chr1	-	919	5	FSM	ENSG00000143622.11	ENST00000539040.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	95.1482396053653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-10	True	NA	-33	True	NA	NA	NA	155911402	155900182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155911242
transcript_149440.known	chr5	-	4156	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	9.46337971105226	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAATTCATGTGTA	-3	True	NA	-25	True	AATAAA	-37	NA	115169908	115124771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
transcript_149447.known	chr5	-	9550	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_5	23.5411873107539	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTCAAATGGATTTC	-8	True	NA	-9	True	AATAAA	-22	NA	115262877	115204011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_149451.known	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	31.927386750114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-7	True	NA	-5	True	TATAAA	-19	NA	115296654	115267189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_149453.known	chr5	-	2145	9	FSM	ENSG00000164221.13	ENST00000506442.5	2145	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	49.4968433336915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTATTTGTTTGAA	NA	False	NA	-54	True	NA	NA	NA	115296693	115267374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115267919_115268881_115269001_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_149455.nic	chr5	-	1292	7	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	16	4012	16	-1788	5prime_fragment	FALSE	canonical	3	101	junction_5	15.4425458465313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGAAAGAACGCCAGCG	-30	True	NA	-116	True	AATGAA	-44	NA	115296677	115271386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_149456.nic	chr5	-	1274	7	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	-83	4129	-83	-1905	5prime_fragment	FALSE	canonical	3	101	junction_5	15.4425458465313	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAACAAAGAAAGAAACA	NA	False	NA	NA	False	AATAAA	-25	NA	115296776	115271503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_149457.nic	chr5	-	1188	7	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	-83	4215	-83	-1991	5prime_fragment	FALSE	canonical	3	101	junction_5	15.4425458465313	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGGAAATTTTCAAGTTA	NA	False	NA	NA	False	AAAAAG	-11	NA	115296776	115271589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_14946.known	chr1	-	803	7	FSM	ENSG00000143622.11	ENST00000461050.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.127660648068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAACTTGAAGAGAAGATG	6	True	NA	NA	False	AAGAAA	-6	NA	155911344	155900397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155900619_155904310_155904503_155904602_155904611_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_149462.nic	chr5	-	330	2	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	48	17423	9	-9459	5prime_fragment	FALSE	canonical	3	147	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCAGTAAGTATA	2	True	NA	-11	True	AAGAAA	-28	NA	115296645	115284797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115284909_115296426
transcript_149463.known	chr5	-	5697	3	FSM	ENSG00000145780.8	ENST00000274457.5	5697	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTATTCTTATTAA	-13	True	NA	-9	True	AATAAA	-18	NA	115544775	115520907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115525618_115542949_115543684_115544522
transcript_149467.known	chr5	-	3918	3	FSM	ENSG00000134970.14	ENST00000456936.4	3918	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	29.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTGTATCAGTGTTTT	-24	True	NA	-1	True	AGTAAA	-22	NA	115626036	115613209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115616446_115620434_115620681_115625600
transcript_149470.known	chr5	-	3453	4	FSM	ENSG00000251201.8	ENST00000333314.3	3453	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	160.91198422326	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTGACTAAACTTGTT	-2	True	NA	NA	False	AATAAA	-14	NA	115626014	115578650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115581316_115616317_115616446_115620434_115620681_115625600
transcript_149473.known	chr5	-	1565	5	FSM	ENSG00000129596.5	ENST00000250535.5	1565	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	24.4987244565916	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-1	True	NA	-2	True	AATAAA	-17	NA	115816659	115804732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
transcript_149476.known	chr5	+	1180	7	FSM	ENSG00000177879.17	ENST00000395548.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	513.836117410557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCAATAATTTTTTTTA	50	True	NA	49	True	NA	NA	NA	115841996	115914011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_115842107_115852978_115853015_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_149478.known	chr5	+	1276	6	FSM	ENSG00000177879.17	ENST00000316788.12	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_4	119.296940446937	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	-12	True	NA	4	True	AATAAA	-22	NA	115841934	115914081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_115842107_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_149480.known	chr5	-	732	6	FSM	ENSG00000145782.13	ENST00000513167.1	732	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	347.284897454525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTTAACAGATGTGATC	286	False	NA	NA	False	NA	NA	NA	115841544	115831719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115840817_115840935_115841389
transcript_149488.nic	chr5	+	1173	5	NIC	ENSG00000177879.17	novel	1276	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	508.020361304545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	-21	True	NA	4	True	AATAAA	-22	NA	115841925	115914081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_115842107_115866669_115866762_115895086_115895159_115902884_115902993_115913361
transcript_149489.known	chr5	-	1082	5	FSM	ENSG00000145782.13	ENST00000379594.7	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	353.499911598292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTCCAAGGTTGA	-7	True	NA	25	True	NA	NA	NA	115841837	115831545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115841389
transcript_14949.nnic	chr1	-	2198	15	NNC	ENSG00000132680.11	novel	2961	14	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9983888064445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGTTTCTCTGTTTT	-8	True	NA	-7	True	AATAAA	-15	NA	155934416	155913043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155913446_155914212_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_149491.known	chr5	-	773	5	FSM	ENSG00000145782.13	ENST00000505993.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	350.012410494257	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCCATTGCTCCTACT	1	True	NA	-13	True	CATAAA	-15	NA	115841565	115831583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840817_115840935_115841389
transcript_149498.known	chr5	-	4040	4	FSM	ENSG00000145782.13	ENST00000509910.2	4040	4	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_3	46.9420446460905	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCCTGTTCTTGGAG	1	True	NA	NA	False	AATAAA	-17	NA	115841565	115828199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115841389
transcript_14950.nic	chr1	-	2838	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	63.1900486510393	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-11	True	NA	-8	True	AATAAA	-14	NA	155934419	155913044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155914321_155915872_155915965_155916624_155916710_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_149505.known	chr5	-	1430	3	FSM	ENSG00000145782.13	ENST00000500945.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGCTGCAGAGGCAA	1	True	NA	NA	False	AATAAA	-14	NA	115841565	115830672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115841389
transcript_149506.known	chr5	+	1433	7	FSM	ENSG00000145781.9	ENST00000632434.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	43.9497819486438	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGAAGTGTACATTT	2	True	NA	30	True	AATAAA	-17	NA	116085025	116293286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_116085094_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_149509.known	chr5	-	1610	1	FSM	ENSG00000271918.1	ENST00000606662.1	1610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCAGTGGGAGTTGGAT	-17	True	NA	NA	False	ATTAAA	-39	NA	116085416	116083806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_116083800_116085400
transcript_14951.nic	chr1	-	2938	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	52.7060622137799	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-10	True	NA	-8	True	AATAAA	-14	NA	155934418	155913044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155914321_155915872_155915965_155916624_155916710_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_149511.known	chr5	-	4256	20	FSM	ENSG00000092421.17	ENST00000257414.12	4256	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	225.082748711031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGAGCTGGAATTCTG	632	False	NA	-20	True	AATAAA	-15	NA	116574395	116445749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_116447812_116467582_116467748_116472884_116472936_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_149514.nnic	chr5	-	4519	20	NNC	ENSG00000092421.17	novel	4256	20	NA	NA	-204	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	213.9264636644	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATTTAAAAAGACAA	0	True	NA	NA	False	AATACA	-13	NA	116575027	116446133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_116447812_116467582_116467748_116468849_116468916_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_149519.known	chr5	-	6828	19	FSM	ENSG00000092421.17	ENST00000343348.11	6828	19	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_2	44.9518260659861	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGTCCTGAATGCT	-2	True	NA	-2	True	AATAAA	-20	NA	116574823	116443554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_116447812_116467582_116467748_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_14952.nic	chr1	-	2856	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	51.3312712513924	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-1	True	NA	-8	True	AATAAA	-14	NA	155934409	155913044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_149529.nic	chr5	-	4288	18	NIC	ENSG00000092421.17	novel	6828	19	NA	NA	-204	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	161.243717186686	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATTTAAAAAGACAA	0	True	NA	NA	False	AATACA	-13	NA	116575027	116446133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_116447812_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_14954.known	chr1	-	2961	14	FSM	ENSG00000132680.11	ENST00000368321.8	2961	14	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	36.2373830318096	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-5	True	NA	-8	True	AATAAA	-14	NA	155934413	155913044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_149542.known	chr5	-	5776	6	FSM	ENSG00000169570.10	ENST00000510708.6	5776	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	16.3633737352662	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAGGATTATTT	-15	True	NA	0	True	ATTAAA	-25	NA	118988547	118836073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118988293
transcript_149549.known	chr5	+	327	1	FSM	ENSG00000197744.5	ENST00000397627.3	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGACAGCAAAAAAGGAAAA	240	False	NA	NA	False	NA	NA	NA	118973795	118974122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_118973800_118974100
transcript_149552.known	chr5	+	1835	13	FSM	ENSG00000172869.15	ENST00000503802.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	21.8263347561813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	49	True	NA	10	True	AATAAA	-19	NA	119071204	119133691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_149553.nic	chr5	+	2258	12	ISM	ENSG00000172869.15	ENST00000539542.6	11538	44	-8	115436	-8	0	5prime_fragment	FALSE	canonical	3	83	junction_10	11.5915329600375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	4	True	NA	10	True	AATAAA	-19	NA	119071078	119133691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_149555.nic	chr5	+	1731	10	ISM	ENSG00000172869.15	ENST00000539542.6	11538	44	-24	119795	-24	0	5prime_fragment	FALSE	canonical	3	93	junction_5	8.71779788708135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACAGCAACTTAGAAA	-12	True	NA	31	True	AATAAA	-31	NA	119071062	119129332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210
transcript_149557.nic	chr5	+	786	3	ISM	ENSG00000172869.15	ENST00000539542.6	11538	44	-22	147125	-22	-208	5prime_fragment	FALSE	canonical	3	106	junction_2	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCAGTAATTTATGAT	-10	True	NA	NA	False	AAGAAA	-3	NA	119071064	119102002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_119071657_119097978_119098105_119101934
transcript_149558.known	chr5	+	795	2	FSM	ENSG00000145779.8	ENST00000274456.6	795	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGACTGATCATGATT	-3	True	NA	NA	False	NA	NA	NA	119268691	119393394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119268908_119392815
transcript_149562.known	chr5	+	2589	25	FSM	ENSG00000133835.18	ENST00000645832.1	2589	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	358.202512457067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGATAGCATTGATA	14	True	NA	26	True	AATAAA	-29	NA	119452537	119542269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_149569.known	chr5	+	2881	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	402.719470875475	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-27	True	NA	23	True	AATAAA	-17	NA	119452496	119542332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_149575.known	chr5	+	2628	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_10	86.899176743595	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-27	True	NA	23	True	AATAAA	-17	NA	119452496	119542332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_149581.known	chr5	+	2551	24	FSM	ENSG00000133835.18	ENST00000643250.1	2551	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	338.115443199592	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-3	True	NA	23	True	AATAAA	-17	NA	119452752	119542332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477493_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_149584.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000684214.1	2494	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_21	280.557462330663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGATACCTTTGTTT	3	True	NA	7	True	AATAAA	-1	NA	119452475	119542316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119536422_119536551_119541904
transcript_149586.known	chr5	+	2563	23	FSM	ENSG00000133835.18	ENST00000682996.1	2563	23	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	283.401986496943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATACCTTTGTTTTT	3	True	NA	9	True	AATAAA	-3	NA	119452475	119542318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_149587.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000515320.5	2494	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	281.797216962133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGTTTCCTTAGAAT	-27	True	NA	9	True	AATAAA	-12	NA	119452496	119542252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_149607.known	chr5	+	844	5	FSM	ENSG00000133835.18	ENST00000509606.1	844	5	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_1	89.1487520944629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	NA	False	NA	23	True	AATAAA	-17	NA	119527157	119542332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_149608.known	chr5	+	2855	8	FSM	ENSG00000151304.6	ENST00000339397.5	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	9.40256152680248	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAATTCAAGGGATTA	-29	True	NA	NA	False	GATAAA	-6	NA	121961974	122028633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941
transcript_149614.nic	chr5	+	790	6	ISM	ENSG00000151304.6	ENST00000339397.5	2855	8	-21	8187	-21	-8187	5prime_fragment	FALSE	canonical	3	88	junction_2	10.6320270880016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGATAGCTCACTCTC	NA	False	NA	-37	True	AAAACA	-3	NA	121961953	122020446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087
transcript_149617.known	chr5	-	5076	7	FSM	ENSG00000113083.15	ENST00000231004.5	5076	7	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_5	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGTCATTTGTTGTT	0	True	NA	-6	True	AATAAA	-15	NA	122078259	122063194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_122066750_122070052_122070169_122070493_122070590_122074012_122074170_122075403_122075542_122076892_122077002_122077354
transcript_149627.known	chr5	+	3577	11	FSM	ENSG00000064692.20	ENST00000261368.13	3577	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12.595237195067	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGGATCAGACAAGTAT	-1	True	NA	NA	False	AATAAA	-23	NA	122312236	122464219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
transcript_14963.known	chr1	-	4499	13	FSM	ENSG00000132680.11	ENST00000368320.7	4499	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	34.2012020581473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	9	True	NA	-8	True	AATAAA	-14	NA	155934399	155913044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_149633.known	chr5	+	6479	15	FSM	ENSG00000205302.7	ENST00000379516.7	6479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	261.96799344927	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTGCCTTCTTACTGC	15	True	NA	NA	False	AATAAA	-28	NA	122775079	122834543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122775212_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_149639.nic	chr5	+	1228	2	ISM	ENSG00000205302.7	ENST00000505854.5	908	6	-118	7611	-102	-7611	5prime_fragment	FALSE	canonical	3	1069	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAATTATGTTCTCATC	NA	False	NA	NA	False	GATAAA	-4	NA	122774976	122796258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_122775212_122795265
transcript_149640.known	chr5	+	1987	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	20.5406101824329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	9	True	NA	14	True	AATAAA	-16	NA	122845612	123009205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_149642.known	chr5	+	588	6	FSM	ENSG00000064652.11	ENST00000506996.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	17.2464489098481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGACACTTAGAATTTT	22	False	NA	5	True	AATAAA	-16	NA	122845625	123002142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
transcript_149643.known	chr5	-	1364	5	FSM	ENSG00000168938.6	ENST00000306442.5	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_4	18.2277261335582	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGCCCATCCACATC	-23	True	NA	NA	False	TATAAA	-31	NA	123036725	123023249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_123024004_123025783_123025969_123028774_123028869_123029304_123029419_123036508
transcript_149646.known	chr5	-	4993	20	FSM	ENSG00000168944.17	ENST00000306467.10	4993	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	32.9693049555504	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGTTCTTGAGCAGC	-24	True	NA	-14	True	AATAAA	-17	NA	123423403	123344891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949
transcript_149652.known	chr5	+	4635	13	FSM	ENSG00000151292.17	ENST00000345990.8	4635	13	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_12	65.576079649688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAAGGGAAATAGCA	-1	True	NA	NA	False	ATTAAA	-12	NA	123512098	123617040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_149658.known	chr5	+	1356	10	FSM	ENSG00000151292.17	ENST00000511130.6	1356	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	92.7146158919941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATCTCTGTAGTGAC	13	True	NA	-71	True	NA	NA	NA	123512259	123614455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_123512571_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_149661.known	chr5	+	920	2	FSM	ENSG00000151292.17	ENST00000508708.1	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGAATAAAGATGTTG	2	True	NA	NA	False	NA	NA	NA	123512190	123545956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_123512571_123545416
transcript_149662.nnic	chr5	+	376	2	FSM	ENSG00000289458.1	ENST00000685834.1	356	2	-25	5	-25	-5	multi-exon	FALSE	canonical	3	727	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCCATGTAATTTTG	NA	False	NA	18	True	AATAAA	-30	NA	124497295	124505105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_124497592_124505025
transcript_149667.nic	chr5	-	3218	5	ISM	ENSG00000168916.16	ENST00000513986.2	6152	10	-149	11028	-149	294	5prime_fragment	FALSE	canonical	3	17	junction_4	22.0340645365307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGCGAAAGCTAAAGG	-5	True	NA	-48	True	AAAAAG	-6	NA	124746788	124647942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124746194
transcript_149668.known	chr5	-	2605	5	FSM	ENSG00000168916.16	ENST00000509799.5	2605	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	14.2016724367238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCAAAAAAGCTACCAACT	8	True	NA	NA	False	GATAAA	-6	NA	124748807	124648236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124748532
transcript_149675.nnic	chr5	-	1827	4	NIC	ENSG00000168916.16	novel	2605	5	NA	NA	-17	294	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	26.2466929133727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGCGAAAGCTAAAGG	-9	True	NA	-48	True	AAAAAG	-6	NA	124748824	124647942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_124649134_124649609_124649698_124701013_124701270_124748532
transcript_149680.known	chr5	+	1847	15	FSM	ENSG00000155324.10	ENST00000513978.5	1847	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	20.9503786922084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTCTTAACGACTTTCAA	6	True	NA	NA	False	NA	NA	NA	126423471	126493326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_149682.known	chr5	+	3109	14	FSM	ENSG00000155324.10	ENST00000515200.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.6961868163329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACAATGCTTCATT	8	True	NA	NA	False	AAAAAG	-7	NA	126423145	126494371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484398_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_149684.known	chr5	+	2905	14	FSM	ENSG00000155324.10	ENST00000285689.8	2905	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.5841234232719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGACAATG	3	True	NA	NA	False	AAGAAA	-26	NA	126423408	126494364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126423690_126465425_126465546_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_149696.known	chr5	-	4765	18	FSM	ENSG00000164904.18	ENST00000409134.8	4765	18	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_12	66.4047565728671	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACAATTGGGTTGTCCT	-13	True	NA	-2	True	AATAAA	-20	NA	126595219	126541840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_149700.known	chr5	-	2332	16	FSM	ENSG00000164904.18	ENST00000636743.1	2332	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	201.802169352947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCGTCTTTACCAAAAA	-13	True	NA	NA	False	NA	NA	NA	126595219	126544153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126595006
transcript_149701.known	chr5	-	2466	16	FSM	ENSG00000164904.18	ENST00000637206.1	2466	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	201.983827735457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACAGTGAGATCCTG	6063	False	NA	NA	False	NA	NA	NA	126595269	126544009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_149703.known	chr5	-	1126	10	FSM	ENSG00000164904.18	ENST00000413020.6	1126	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	224.857046494044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTACATGGTGAAACTC	-12	True	NA	NA	False	NA	NA	NA	126595218	126564357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126564593_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_149706.nic	chr5	-	1381	9	ISM	ENSG00000164904.18	ENST00000413020.6	1126	10	-7	3418	0	34	5prime_fragment	FALSE	canonical	3	671	junction_3	43.2548768926696	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCCAGGCACAGTGGC	6107	False	126595242	NA	False	AAAAAG	-12	NA	126595225	126567775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_149708.known	chr5	-	1935	16	FSM	ENSG00000164904.18	ENST00000553117.5	1935	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	201.935127096688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCCTGACCAAGTG	5996	False	NA	NA	False	AATACA	-39	NA	126595336	126544595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_149714.known	chr5	+	3609	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_4	64.7649596618418	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	3	True	NA	50	True	AATAAA	-24	NA	126600946	126627252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
transcript_149723.nic	chr5	+	951	4	ISM	ENSG00000164902.14	ENST00000297540.5	3609	5	-20	9919	2	0	5prime_fragment	FALSE	canonical	3	495	junction_1	67.9035263361844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATAATGTCCTCACC	-17	True	NA	NA	False	AAAACA	-30	NA	126600926	126617333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249
transcript_149726.known	chr5	+	625	2	FSM	ENSG00000164902.14	ENST00000514725.1	625	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAACGACCTGTCAA	-19	True	NA	NA	False	NA	NA	NA	126600924	126604064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126601059_126603573
transcript_149731.known	chr5	+	2890	11	FSM	ENSG00000113368.12	ENST00000261366.10	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_3	14.7597425451801	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTCCTTTTTAACGC	-34	True	NA	22	True	AATAAA	-20	NA	126777135	126837020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_149732.known	chr5	+	1801	11	FSM	ENSG00000113368.12	ENST00000504788.5	1801	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	80.9972839050792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGGGAGGGTAAATAA	-17	True	NA	NA	False	NA	NA	NA	126777152	126836571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777245_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_149743.known	chr5	+	1572	6	FSM	ENSG00000113368.12	ENST00000395354.1	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_3	15.8996855314814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTTTCTTGGTCATTT	19	True	NA	NA	False	AATAAA	-24	NA	126777188	126819234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921
transcript_149744.known	chr5	+	738	3	FSM	ENSG00000113368.12	ENST00000492190.5	738	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAGATTGCCCAGGT	-9	True	NA	NA	False	AAAAAG	-26	NA	126777160	126804914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777253_126777360_126777868_126804775
transcript_149745.known	chr5	+	3475	12	FSM	ENSG00000113368.12	ENST00000460265.5	3475	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	105.210454183135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATATACTGTCCTTTT	NA	False	NA	16	True	AATAAA	-14	NA	126776622	126837014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126815169_126815248_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_149746.known	chr5	-	3946	5	FSM	ENSG00000173926.6	ENST00000308660.6	3946	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	9.28372231381357	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTGTCTTTCATTG	5	True	NA	NA	False	AATAAA	-20	NA	127030558	126867713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126870792_126878184_126878395_126914929_126915135_126917983_126918228_127030349
transcript_149750.nic	chr5	-	2009	3	ISM	ENSG00000173926.6	ENST00000308660.6	3946	5	-398	46263	-398	684	5prime_fragment	FALSE	canonical	3	53	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATATTGGCAACAGTA	NA	False	NA	NA	False	NA	NA	NA	127030956	126913976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_126915135_126917983_126918228_127030349
transcript_149752.known	chr5	+	7594	26	FSM	ENSG00000145794.17	ENST00000274473.6	7594	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.8757426685932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGTTTCTTTCTATA	30	False	NA	5	True	AATAAA	-16	NA	127290858	127461222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127433362_127433510_127434686_127434822_127435360_127435490_127438438_127438568_127440738_127440868_127442997_127443127_127445456_127445694_127447556_127447685_127449098_127449223_127454565_127454611_127455400_127455608_127457127
transcript_149755.known	chr5	+	7606	25	FSM	ENSG00000145794.17	ENST00000503335.7	7606	25	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_1	12.9114908985067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGTTTCTTTCTATA	0	True	NA	5	True	AATAAA	-16	NA	127290795	127461222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127433362_127433510_127434686_127434822_127435360_127435490_127438438_127438568_127440738_127440868_127442997_127443127_127445456_127445694_127447556_127447685_127449098_127449223_127454565_127454611_127455400_127455608_127457127
transcript_149764.known	chr5	+	2238	15	FSM	ENSG00000145794.17	ENST00000418761.6	2238	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.1347189771118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGATTTCTAGTGTC	18	True	NA	14	True	AGTAAA	-17	NA	127290846	127424604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127424338
transcript_149766.known	chr5	+	2365	14	FSM	ENSG00000145794.17	ENST00000508365.5	2365	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	32.9548732153388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATGTTTCAGCTTGGCT	17	True	NA	NA	False	NA	NA	NA	127290845	127424781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127424338
transcript_149771.known	chr5	+	4664	9	FSM	ENSG00000164244.21	ENST00000296666.13	4664	9	0	0	0	0	multi-exon	TRUE	canonical	3	403	junction_8	35.0348041238994	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGTATAGCGATTTT	-14	True	NA	33	True	AATAAA	-20	NA	127517639	127555085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_149778.known	chr5	-	2654	4	FSM	ENSG00000245937.9	ENST00000499346.7	2654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.0855260988773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	-9	True	NA	NA	False	NA	NA	NA	128083100	127939151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082734
transcript_149779.known	chr5	-	2318	4	FSM	ENSG00000245937.9	ENST00000514409.6	2318	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.25967446224258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTCGGGAGGCTGAGGC	-6	True	NA	NA	False	AATACA	-40	NA	128083097	127939249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082969
transcript_149785.known	chr5	-	3209	3	FSM	ENSG00000245937.9	ENST00000668567.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAGATTCTTGCAA	1450	False	NA	NA	False	AATACA	-16	NA	128083131	128021587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_128024299_128061143_128061245_128082734
transcript_149787.known	chr5	-	10927	65	FSM	ENSG00000138829.12	ENST00000262464.9	10927	65	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_55	34.6170455664547	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTGACTGAAAATTTT	-3	True	NA	-21	True	AATAAA	-16	NA	128538245	128257908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_128259830_128261735_128261908_128263424_128263657_128271998_128272119_128273839_128273969_128274566_128274684_128276037_128276161_128277879_128278006_128278634_128278842_128280191_128280318_128286717_128286850_128287307_128287431_128288437_128288558_128289126_128289253_128289881_128289948_128290731_128290885_128291528_128291655_128300816_128300937_128301381_128301511_128302972_128303090_128304956_128305083_128305510_128305637_128305822_128305949_128307134_128307204_128309246_128309400_128309982_128310109_128311299_128311426_128311884_128311954_128312633_128312796_128318148_128318272_128318878_128319002_128328695_128328822_128330572_128330696_128332911_128333035_128334718_128334845_128335169_128335296_128335454_128335578_128335987_128336114_128337996_128338123_128338932_128339062_128344384_128344511_128345356_128345585_128349346_128349473_128349954_128350006_128350867_128351006_128357275_128357396_128361722_128361849_128364599_128364726_128366376_128366431_128369181_128369335_128374627_128374751_128376730_128376854_128377751_128377878_128378770_128378891_128392017_128392156_128393134_128393369_128395121_128395275_128408673_128408800_128446480_128446607_128464723_128464922_128519272_128519369_128527871_128527968_128530594_128530694_128536401_128536485_128537349
transcript_149791.known	chr5	+	2863	10	FSM	ENSG00000113396.13	ENST00000262462.9	2863	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	8.01387685344754	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	5	True	NA	15	True	AATAAA	-20	NA	128965487	129033635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_149792.known	chr5	+	1942	5	FSM	ENSG00000066583.12	ENST00000173527.6	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	22.2977016752848	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTGATTGAAATTAT	13	True	NA	7	True	ATTAAA	-15	NA	129094748	129114028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_129095076_129104955_129105076_129105184_129105389_129106945_129107063_129112854
transcript_149796.known	chr5	+	5201	23	FSM	ENSG00000145808.10	ENST00000274487.9	5201	23	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	16.7359167388855	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTCTCATGTCTTCTA	-2	True	NA	17	True	AATAAA	-18	NA	129460297	129738683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_129460483_129461101_129461758_129509076_129509243_129526283_129526457_129527747_129527832_129528519_129528678_129551863_129551908_129596558_129596665_129620617_129620759_129622197_129622349_129641858_129641961_129647764_129647896_129648797_129648971_129654305_129654434_129658616_129658738_129665498_129665580_129679763_129679922_129684119_129684274_129694719_129694856_129701387_129701593_129704238_129704392_129734931_129735110_129737066
transcript_14980.nic	chr1	-	1335	5	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	0	145	intron_retention	FALSE	canonical	3	200	junction_2	9.53939201416946	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCCAAGTAATACATACAA	-5	True	NA	NA	False	NA	NA	NA	155934413	155926325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_149800.nic	chr5	+	4014	22	NIC	ENSG00000145808.10	novel	5201	23	NA	NA	-655	-1203	intron_retention	FALSE	canonical	3	21	junction_1	20.0947867247886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATCATTATACTTAAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	129459625	129737480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_129460483_129509076_129509243_129526283_129526457_129527747_129527832_129528519_129528678_129551863_129551908_129596558_129596665_129620617_129620759_129622197_129622349_129641858_129641961_129647764_129647896_129648797_129648971_129654305_129654434_129658616_129658738_129665498_129665580_129679763_129679922_129684119_129684274_129694719_129694856_129701387_129701593_129704238_129704392_129734931_129735110_129737066
transcript_149807.known	chr5	-	923	2	FSM	ENSG00000251680.6	ENST00000670057.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTATTTTTAATTGCC	245	False	NA	NA	False	ACTAAA	-24	NA	129905687	129898694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_129899510_129905579
transcript_149808.known	chr5	+	6219	5	FSM	ENSG00000186687.16	ENST00000379380.9	6219	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	-28	True	NA	25	True	AATAAA	-25	NA	131170943	131205428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131187027_131187110_131199530
transcript_149810.known	chr5	-	1032	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	2259.67612447005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	NA	False	NA	-8	True	AATAAA	-26	NA	131165349	131159284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
transcript_149811.known	chr5	+	317	4	FSM	ENSG00000186687.16	ENST00000507584.1	317	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	62.4731053245226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGCAAAAGTCCTGGAAA	17	True	NA	NA	False	AATACA	-38	NA	131170988	131199653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131199530
transcript_149814.known	chr5	-	825	4	FSM	ENSG00000169567.13	ENST00000508495.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2470.64202182348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGAGTGTTGCGTT	-20	True	NA	-11	True	AATAAA	-23	NA	131165301	131159287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131160655_131160845_131162571_131162677_131165094
transcript_149815.known	chr5	-	1070	4	FSM	ENSG00000169567.13	ENST00000508488.2	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2460.86177317351	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTCTCTGAGTGTTG	-44	True	NA	-15	True	AATAAA	-19	NA	131165325	131159291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131162063_131162478_131162571_131162677_131165094
transcript_149817.known	chr5	-	3080	3	FSM	ENSG00000169567.13	ENST00000675372.1	3080	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	2295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGGTACAAATGATAGT	-52	False	NA	NA	False	AATAAA	-2	NA	131165333	131156910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131162571_131162677_131165059
transcript_149818.known	chr5	-	852	3	FSM	ENSG00000169567.13	ENST00000304043.10	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	4893	junction_1	180	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATAGGAAATTGACCA	25	True	NA	NA	False	NA	NA	NA	131165256	131159026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131162571_131162677_131165094
transcript_149820.known	chr5	-	3527	3	FSM	ENSG00000169567.13	ENST00000675491.1	3527	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	2594.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTATAGTCTCTCTGAGT	NA	False	NA	-19	True	AATAAA	-15	NA	131165334	131159295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131162478_131162571_131162677_131165094
transcript_149823.nnic	chr5	+	1671	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-51	-542	at_least_one_novel_splicesite	FALSE	canonical	3	270	junction_5	54.9821789309955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGCATTCATTCTGT	NA	False	NA	3	True	AATAAA	-15	NA	131263957	131392564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_149824.nnic	chr5	+	2145	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	20	3	at_least_one_novel_splicesite	FALSE	canonical	3	270	junction_5	54.9821789309955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCAATTCAAGCCTAT	13	False	NA	7	True	ATTAAA	-17	NA	131264028	131393109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_149825.nnic	chr5	+	3720	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	3	-5	intron_retention	FALSE	canonical	3	270	junction_5	54.9821789309955	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTGGCCTTTCCTTT	-4	True	NA	33	True	AATAAA	-14	NA	131264011	131394667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_149826.known	chr5	+	3591	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	127.313785585065	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTAGTTTTTCTTTT	-1	True	NA	56	True	AATAAA	-37	NA	131264074	131394690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_149835.known	chr5	+	4404	5	FSM	ENSG00000158985.14	ENST00000505065.2	4404	5	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	32.2645316098034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTTCCTTTAAATT	-23	True	NA	38	True	AATAAA	-19	NA	131264052	131394672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992
transcript_149838.nnic	chr5	+	3589	5	NNC	ENSG00000158985.14	novel	3485	5	NA	NA	-35	-5	intron_retention	FALSE	canonical	3	42	junction_1	152.216950435883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTGGCCTTTCCTTT	NA	False	NA	33	True	AATAAA	-14	NA	131263973	131394667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_131264167_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_149839.known	chr5	+	3485	5	FSM	ENSG00000158985.14	ENST00000395246.5	3485	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	177.49700701702	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTAGTTTTTCT	-7	True	NA	53	True	AATAAA	-34	NA	131264008	131394687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131264167_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_149842.known	chr5	-	8350	28	FSM	ENSG00000158987.22	ENST00000509018.6	8350	28	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	9.54492661798199	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCTGTACTTAATTAT	-16	True	NA	-10	True	AATAAA	-14	NA	131635229	131423920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131427292_131428901_131429217_131430858_131431350_131433429_131433659_131439580_131439716_131442348_131442538_131446482_131446704_131453053_131453178_131455800_131456013_131461704_131462089_131464040_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
transcript_149845.known	chr5	-	6568	18	FSM	ENSG00000217128.13	ENST00000510461.6	6568	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	11.6998210733664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGTGTTGGTCTTTCT	18	False	131797035	0	True	AATAAA	-18	NA	131797017	131641713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131644764_131647089_131647206_131651801_131652000_131670462_131670632_131671504_131672925_131677702_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_149847.known	chr5	-	1720	13	FSM	ENSG00000217128.13	ENST00000511848.1	1720	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.8541390362025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAAGCATCTCTGCTTT	19	False	131797035	NA	False	AATAAA	-23	NA	131797016	131677596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_149848.known	chr5	-	6535	21	FSM	ENSG00000164398.15	ENST00000651883.2	6535	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	2.47184141886166	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTATAATTACTATTT	-5	True	NA	NA	False	AATAAA	-20	NA	132011658	131949972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131954372_131959535_131959608_131960519_131960622_131962534_131962679_131966415_131966533_131967939_131968029_131970127_131970201_131971549_131971646_131972723_131972859_131973265_131973401_131974892_131974971_131976647_131976722_131985406_131985459_131986821_131986855_131988047_131988227_131988804_131988905_131989406_131989509_131990099_131990165_131990852_131990968_131994030_131994252_132011504
transcript_149850.known	chr5	-	2230	16	FSM	ENSG00000072682.20	ENST00000166534.8	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	23.7627158941622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-15	True	NA	-8	True	AATAAA	-24	NA	132227857	132192609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_149854.nic	chr5	-	2233	16	NIC	ENSG00000072682.20	novel	2223	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_15	20.572473518434	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-24	True	NA	-8	True	AATAAA	-24	NA	132227866	132192609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_149855.known	chr5	-	2223	16	FSM	ENSG00000072682.20	ENST00000379086.5	2223	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	22.7091758253501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	23	True	NA	-8	True	AATAAA	-24	NA	132227819	132192609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227259_132227789
transcript_149856.known	chr5	-	4553	15	FSM	ENSG00000072682.20	ENST00000379104.7	4553	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	20.1757583374156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-11	True	NA	-2	True	ATTAAA	-16	NA	132227853	132190146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_149857.known	chr5	-	4547	15	FSM	ENSG00000072682.20	ENST00000360568.8	4547	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	15.1415093739841	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-11	True	NA	-2	True	ATTAAA	-16	NA	132227853	132190146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_149864.known	chr5	-	2625	16	FSM	ENSG00000072682.20	ENST00000379100.7	2625	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	26.4042084187772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCCTTACTTGGAGTA	7	True	NA	-11	True	AATAAA	-21	NA	132227835	132192612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132226696_132227259_132227789
transcript_149866.known	chr5	+	2257	7	FSM	ENSG00000131435.13	ENST00000253754.8	2257	7	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_5	12.3917535302941	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTCTCTGATTACC	7	True	NA	NA	False	AGTAAA	-23	NA	132257695	132273454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132271790_132271909_132272024
transcript_149867.known	chr5	+	1006	6	FSM	ENSG00000131435.13	ENST00000379018.7	1006	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	76.8765243751303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACCTGGCCTGCCAC	18	False	NA	31	True	AATAAA	-22	NA	132257706	132272332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132272024
transcript_149872.known	chr5	+	3277	10	FSM	ENSG00000197375.14	ENST00000245407.8	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	4.96903994999953	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTGCCTAGAATCTT	-8	True	NA	7	True	AGTAAA	-17	NA	132369709	132395612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132370366_132378377_132378482_132384146_132384302_132385327_132385500_132387024_132387152_132388920_132389022_132390689_132390905_132392432_132392616_132393675_132393812_132394184
transcript_149874.nnic	chr5	+	3470	20	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-26	30287	13	35	5prime_fragment	FALSE	canonical	3	135	junction_4	16.7365110857699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGTTGAAGAAGAAAGAAA	-14	True	NA	NA	False	AAAAAG	-17	NA	132556950	132616062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002
transcript_149875.nnic	chr5	+	3390	19	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-55	37002	-8	6	5prime_fragment	FALSE	canonical	3	135	junction_4	16.9185594635296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAATGAAGATATGAGAC	-43	True	NA	NA	False	AATAAA	-42	NA	132556921	132609347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282
transcript_149876.nnic	chr5	+	3306	18	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-36	37140	3	-130	5prime_fragment	FALSE	canonical	3	135	junction_4	17.3988425817176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATTTAAAACTTAAAATT	-24	True	NA	NA	False	NA	NA	NA	132556940	132609209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116
transcript_149878.nnic	chr5	+	3161	17	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-12	37652	-12	51	5prime_fragment	FALSE	canonical	3	135	junction_4	17.6412823726055	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGCAACAAAATAGCAC	0	True	NA	NA	False	AAAAAG	-23	NA	132556964	132608697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614
transcript_149880.nnic	chr5	+	2563	13	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-50	50581	-3	0	5prime_fragment	FALSE	canonical	3	135	junction_4	16.5100979201619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGCGGCGTGATGAAA	-38	True	NA	22	True	GATAAA	-33	NA	132556926	132595768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572
transcript_149881.nnic	chr5	+	2259	12	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-58	51421	-11	-840	5prime_fragment	FALSE	canonical	3	135	junction_4	17.237763656222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGCAGTTGTCCAGTT	-46	True	NA	NA	False	AATAAA	-30	NA	132556918	132594928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868
transcript_149884.known	chr5	-	3554	10	FSM	ENSG00000125347.15	ENST00000245414.9	3554	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.51494009523069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCAGTGGTTACCA	20	True	NA	NA	False	AATAAA	-18	NA	132490773	132481608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_149888.known	chr5	-	1216	9	FSM	ENSG00000125347.15	ENST00000680903.1	1216	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.90470587688119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATGGGGCCTCCCTCCT	16	True	NA	NA	False	NA	NA	NA	132490777	132483827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_149897.known	chr5	+	8272	25	FSM	ENSG00000113522.14	ENST00000378823.8	8272	25	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	18.8900326451103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTTTCTCCCAGAACT	12	True	NA	34	True	AATAAA	-26	NA	132556976	132646349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002_132616131_132618069_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177
transcript_149903.nic	chr5	+	3263	17	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-114	37652	-67	51	5prime_fragment	TRUE	canonical	3	135	junction_4	17.6412823726055	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGCAACAAAATAGCAC	NA	False	NA	NA	False	AAAAAG	-23	NA	132556862	132608697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614
transcript_149906.nic	chr5	+	2136	11	ISM	ENSG00000113522.14	ENST00000652016.1	3134	18	-46	16661	3	0	5prime_fragment	FALSE	canonical	3	135	junction_4	17.7943811356282	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATCAAAAGAAATTAAT	-32	True	NA	NA	False	AAAACA	-21	NA	132556932	132591985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876
transcript_149909.nic	chr5	+	1008	5	ISM	ENSG00000113522.14	ENST00000453394.5	2076	12	-317	15861	-16	0	5prime_fragment	FALSE	canonical	3	135	junction_4	14.9227175809234	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTCAGAAAGTAAAAGAATA	-51	True	NA	NA	False	ATTAAA	-37	NA	132556913	132579907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861
transcript_14991.known	chr1	-	4080	22	FSM	ENSG00000116584.21	ENST00000313695.11	4080	22	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_21	23.1946314845745	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTCTTCCATAATGT	6384	False	NA	-3	True	ATTAAA	-18	NA	155978160	155946850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978066
transcript_149911.known	chr5	-	6325	17	FSM	ENSG00000131437.16	ENST00000378746.8	6325	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	9.38894795757224	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTAGTGGTCTGCTGC	NA	False	NA	-4	True	AATAAA	-18	NA	132737638	132692627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_14992.known	chr1	-	2958	22	FSM	ENSG00000116584.21	ENST00000313667.8	2958	22	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	17.7054509458889	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGCCCCTCCCCCCTGCC	6117	False	NA	NA	False	NA	NA	NA	155978427	155947941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_149926.known	chr5	-	4394	10	FSM	ENSG00000164402.14	ENST00000296873.11	4394	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	61.2717081712451	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTCTTTTTTGGG	2659	False	NA	-2	True	ATTAAA	-21	NA	132777421	132756000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
transcript_149933.known	chr5	-	1817	10	FSM	ENSG00000164402.14	ENST00000378701.5	1817	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	80.3409401654391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGGCATTTCTTTAT	-13	True	NA	-4	True	AATAAA	-15	NA	132777261	132758143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132758557_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763887_132764223_132764420_132765408_132765530_132777107
transcript_149934.known	chr5	-	1726	10	FSM	ENSG00000164402.14	ENST00000458488.2	1726	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	80.3409401654391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTATGCCTATCATAT	0	True	NA	-60	True	AATACA	-19	NA	132777220	132758199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132758557_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
transcript_149944.known	chr5	-	351	1	FSM	ENSG00000164403.15	ENST00000606676.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGTCTGAGCCTTCTG	5623	False	NA	NA	False	AATGAA	-16	NA	132825282	132824931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132824900_132825300
transcript_149945.known	chr5	+	1573	3	FSM	ENSG00000164405.11	ENST00000378670.8	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	4444	junction_1	670	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAATTATCTTTTTG	-5	True	NA	NA	False	AATAAA	-19	NA	132866641	132868847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132866688_132866868_132867036_132867487
transcript_149946.known	chr5	+	509	2	FSM	ENSG00000164405.11	ENST00000480372.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGTGATGATAGTTGCA	10	True	NA	NA	False	NA	NA	NA	132866656	132867342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132866692_132866868
transcript_149947.known	chr5	+	258	2	FSM	ENSG00000164405.11	ENST00000496429.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	-5	True	NA	25	True	AATAAA	-29	NA	132866641	132867699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132866688_132867487
transcript_149948.known	chr5	+	586	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	5784	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	-1	True	NA	9	True	AATAAA	-13	NA	132866645	132867683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132867036_132867487
transcript_149953.known	chr5	-	2160	5	FSM	ENSG00000155329.12	ENST00000355372.6	2160	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	134.165010341743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTTAAACTTCTGTTA	6	True	NA	-15	True	AATAAA	-18	NA	133026549	132996995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998833_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_149954.known	chr5	-	794	5	FSM	ENSG00000155329.12	ENST00000513541.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	120.692532909041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTTTATTTGAAGGGT	6	True	NA	NA	False	NA	NA	NA	133026549	132998407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133022840_133022907_133026496
transcript_14996.known	chr1	-	4169	22	FSM	ENSG00000116584.21	ENST00000361247.9	4169	22	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_16	16.1802488706058	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTACTGTCTTCCATAA	-6	True	NA	-6	True	ATTAAA	-15	NA	155978547	155946853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_149960.known	chr5	-	2178	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	40.4310112001501	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	NA	False	NA	-4	True	AATAAA	-29	NA	133026604	132996984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
transcript_149961.known	chr5	-	608	4	FSM	ENSG00000155329.12	ENST00000509008.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	133.389987963448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATTTAGAATATGTTA	6	True	NA	NA	False	AAAACA	-18	NA	133026549	132998527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133026496
transcript_149970.known	chr5	-	876	3	FSM	ENSG00000155329.12	ENST00000513848.5	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTTCTAATGCTTTT	-16	True	NA	-121	True	NA	NA	NA	133026571	132998211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133006758_133006921_133026496
transcript_149974.known	chr5	-	325	3	FSM	ENSG00000155329.12	ENST00000504170.2	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	39.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGTGGATATTTT	NA	False	NA	-5	True	AATAAA	-13	NA	133026589	133019037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133019204_133022840_133022907_133026496
transcript_149978.known	chr5	-	829	1	FSM	ENSG00000286408.1	ENST00000665702.1	829	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGATTTGTCGTTT	NA	False	NA	2	True	NA	NA	NA	133051893	133051064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133051100_133051900
transcript_149983.known	chr5	+	4774	19	FSM	ENSG00000170606.16	ENST00000304858.7	4774	19	0	0	0	0	multi-exon	FALSE	canonical	3	1255	junction_6	135.979119675244	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCCTTAATTCCATAA	-27	True	NA	31	True	AATAAA	-23	NA	133052012	133106449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
transcript_149994.nic	chr5	+	1288	8	ISM	ENSG00000170606.16	ENST00000304858.7	4774	19	-65	19591	-65	-1637	5prime_fragment	FALSE	canonical	3	1255	junction_6	99.4008582067826	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTTTTGTGATTGA	-14	True	NA	NA	False	NA	NA	NA	133051947	133086858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781
transcript_149998.known	chr5	-	5396	16	FSM	ENSG00000053108.17	ENST00000265342.12	5396	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	2.8095076674274	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATAGTTTTTTTTTTCC	-6	True	NA	NA	False	AATAAA	-17	NA	133612541	133196454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133199798_133201932_133202043_133210190_133210299_133217228_133217379_133220747_133220867_133224189_133224217_133225149_133225285_133225657_133225820_133233416_133233538_133249409_133249577_133312653_133312778_133316458_133316653_133400737_133400987_133567185_133567220_133603857_133603994_133612324
transcript_15.known	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00043_+_0_1000
transcript_150002.known	chr5	-	2188	3	FSM	ENSG00000113583.8	ENST00000231512.5	2188	3	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	47	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-17	True	NA	-10	True	AATAAA	-20	NA	133968625	133955509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133956991_133959493_133960021_133968445
transcript_15001.nic	chr1	-	4415	22	NIC	ENSG00000116584.21	novel	2958	22	NA	NA	-221	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_16	19.5962650890974	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGTACTGTCTTCCAT	5776	False	NA	-8	True	ATTAAA	-13	NA	155978768	155946855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_150014.known	chr5	-	1807	9	FSM	ENSG00000213585.11	ENST00000395044.7	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_8	452.177353894465	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTCTGTTGTCTTTA	-27	True	NA	-6	True	AATAAA	-15	NA	134004742	133971914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993016_134004646
transcript_150016.known	chr5	-	1873	9	FSM	ENSG00000213585.11	ENST00000395047.6	1873	9	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_8	220.653574636805	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTTAAAAAACTTGAAT	506	False	NA	-43	True	NA	NA	NA	134004842	133971951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004646
transcript_150017.known	chr5	-	1839	9	FSM	ENSG00000213585.11	ENST00000265333.8	1839	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_8	640.418405712234	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTAGATTTATTTT	-23	True	NA	-15	True	AATAAA	-17	NA	134004975	133971870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004894
transcript_150034.known	chr5	-	802	7	FSM	ENSG00000113558.19	ENST00000522855.5	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	3387.80796468093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAAACCTTACGGCCA	2	True	NA	-54	True	NA	NA	NA	134176950	134157571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176854
transcript_15004.nic	chr1	-	4418	22	NIC	ENSG00000116584.21	novel	4169	22	NA	NA	-221	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	18.2716960155166	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGTACTGTCTTCCAT	5776	False	NA	-8	True	ATTAAA	-13	NA	155978768	155946855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_150043.known	chr5	-	4582	7	FSM	ENSG00000113575.10	ENST00000481195.6	4582	7	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_1	130.460296216469	830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTGACATATTTCT	7	True	NA	-14	True	ATTAAA	-16	NA	134226073	134194331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134197845_134199085_134199205_134200334_134200497_134200984_134201075_134201847_134202022_134205921_134206132_134225759
transcript_150048.known	chr5	-	9386	6	FSM	ENSG00000113558.19	ENST00000353411.11	9386	6	0	0	0	0	multi-exon	FALSE	canonical	3	6980	junction_4	279.828233028764	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTTTTAAAAAGTGG	2	True	NA	-11	True	AATAAA	-37	NA	134176950	134148934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_150065.known	chr5	-	899	6	FSM	ENSG00000113558.19	ENST00000521216.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2965.48205862049	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTGTAAATAAAACAACT	336	False	NA	-33	True	TTTAAA	-6	NA	134176920	134157391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134157769_134158454_134158629_134161019_134161131_134167169_134167244_134173925_134174023_134176854
transcript_150066.known	chr5	+	1418	1	FSM	ENSG00000270177.1	ENST00000602919.1	1418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTCTTTACCGTTGCC	-6	True	NA	NA	False	TATAAA	-24	NA	134226409	134227827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134226400_134227800
transcript_150067.known	chr5	-	586	3	FSM	ENSG00000006837.12	ENST00000521755.1	586	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	33	False	NA	-3	True	ATTAAA	-17	NA	134371004	134308000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134308467_134321790_134321904_134370997
transcript_150069.known	chr5	+	2241	6	FSM	ENSG00000119048.8	ENST00000265339.7	2241	6	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	13.4610549363711	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACTATAGACATTCA	-2	True	NA	NA	False	AAAAAG	-39	NA	134371568	134392108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388324_134388414_134390224
transcript_150073.known	chr5	+	415	4	FSM	ENSG00000119048.8	ENST00000510021.5	415	4	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	108.02880274363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATGAGAAAAGAGTTT	9	True	NA	NA	False	AAAACA	-5	NA	134371468	134390298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134371640_134374382_134374464_134388324_134388414_134390224
transcript_150074.known	chr5	+	235	2	FSM	ENSG00000119048.8	ENST00000504431.1	235	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGATAAATTAGAAAAAAA	35	False	NA	NA	False	ACTAAA	-5	NA	134371605	134374583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134371640_134374382
transcript_150077.known	chr5	+	644	6	FSM	ENSG00000119048.8	ENST00000507277.1	644	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	90.2055430669313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTGTATTTTTTTCC	33	False	NA	5	True	CATAAA	-12	NA	134371603	134390573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388351_134388414_134390224
transcript_150078.nnic	chr5	-	786	4	NNC	ENSG00000237190.4	novel	1228	3	NA	NA	-61	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.553293826224	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTTGTTGTTGATGT	NA	False	NA	-80	True	AATAAA	-16	NA	134411942	134402086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_134402130_134402610_134402927_134409902_134410003_134411615
transcript_150079.known	chr5	-	1228	3	FSM	ENSG00000237190.4	ENST00000458198.3	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	18.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGGTAATTAATTT	-4	True	NA	-58	True	AATAAA	-38	NA	134411881	134402064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134402927_134409902_134410003_134411615
transcript_150080.known	chr5	-	800	2	FSM	ENSG00000237190.4	ENST00000395009.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATCTGAGAATATCT	-4	True	NA	-6	True	AATAAA	-17	NA	134411881	134410548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134411083_134411615
transcript_150085.known	chr5	+	1107	2	FSM	ENSG00000251169.2	ENST00000515627.2	1107	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGATGTGCCATCTA	37	False	NA	NA	False	AATAAA	-31	NA	134506551	134509229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134506835_134508405
transcript_150088.nic	chr5	+	2860	12	NIC	ENSG00000043143.22	novel	2802	11	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.0614718510783	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTCTTTCCTCTG	NA	False	NA	41	True	AATATA	-19	NA	134524231	134579474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134524430_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_150094.known	chr5	+	6757	12	FSM	ENSG00000043143.22	ENST00000681547.2	6757	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	28.3368171573938	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTGTGAGGCTCCA	-3	True	NA	20	True	AATAAA	-16	NA	134525669	134583227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_150095.nic	chr5	+	3414	12	NIC	ENSG00000043143.22	novel	6757	12	NA	NA	-399	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	28.7278480955039	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTGTCTTTCCTCTGT	927	False	NA	42	True	AATATA	-20	NA	134525257	134579475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578496
transcript_150096.known	chr5	+	2748	12	FSM	ENSG00000043143.22	ENST00000282605.8	2748	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.1665894574795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTCTTTCCTCTG	-16	True	NA	41	True	AATATA	-19	NA	134525656	134579474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134525743_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_150098.known	chr5	+	2573	12	FSM	ENSG00000043143.22	ENST00000512386.6	2573	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	35.1786467915218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCCCCTTCCCTGTCCC	3	True	NA	NA	False	NA	NA	NA	134526218	134579317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_150099.known	chr5	+	2570	12	FSM	ENSG00000043143.22	ENST00000612830.2	2570	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	35.4659655267385	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCCCCTTCCCTGTCCC	3	True	NA	NA	False	NA	NA	NA	134526218	134579317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578496
transcript_1501.nic	chr1	-	2091	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	160.58555043423	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAAACTTCTGCAGGG	9044	False	NA	39	True	NA	NA	NA	1780181	1752470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_150100.nic	chr5	+	3024	12	NIC	ENSG00000043143.22	novel	2802	11	NA	NA	147	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.4244945284474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTCTTTCCTCTG	181	False	NA	41	True	AATATA	-19	NA	134526396	134579474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134526759_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_150102.nic	chr5	+	2730	11	NIC	ENSG00000043143.22	novel	2802	11	NA	NA	-80	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	37.6655014569035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTGTTGTCTTTCCTCT	NA	False	NA	40	True	AATATA	-18	NA	134524231	134579473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134524430_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578493
transcript_150105.known	chr5	+	3212	11	FSM	ENSG00000043143.22	ENST00000361895.6	3212	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	28.9006920332369	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACTGTCACAAGCACAAC	0	True	NA	3	True	AATAAA	-21	NA	134525672	134579814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578493
transcript_150107.known	chr5	+	6465	11	FSM	ENSG00000043143.22	ENST00000395003.5	6465	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	39.1776722126264	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGAGGCTCCATTG	-12	True	NA	23	True	AATAAA	-19	NA	134526107	134583230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578496
transcript_150114.known	chr5	+	6389	23	FSM	ENSG00000113615.13	ENST00000398844.7	6389	23	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_18	21.4001621991227	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTGACTAGTTATTT	-13	True	NA	17	True	AATAAA	-20	NA	134648784	134727909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693726_134693934_134697125_134697247_134697898_134698058_134703758_134703933_134705326_134705438_134708712_134708889_134715023_134715162_134718068_134718174_134720997_134721091_134723566_134723671_134724979
transcript_150118.known	chr5	-	929	8	FSM	ENSG00000152700.14	ENST00000439578.5	929	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	90.5520483997339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTGAAAACTGATTC	31	True	NA	-15	True	ATTAAA	-16	NA	134632774	134606801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632076_134632196_134632727
transcript_150120.known	chr5	-	6517	7	FSM	ENSG00000152700.14	ENST00000402673.7	6517	7	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	15.140086598901	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTGTCAAGTTCCATT	14	False	134632842	-3	True	AATAAA	-23	NA	134632828	134601148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
transcript_150123.known	chr5	-	506	5	FSM	ENSG00000152700.14	ENST00000509730.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	80.3336791140553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCTTCCGCTGGATGG	NA	False	NA	NA	False	NA	NA	NA	134613137	134606986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134613013
transcript_150125.known	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	80	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	31	False	NA	15	True	AATAAA	-16	NA	134738582	134751377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134738793_134743986_134744053_134750758
transcript_150127.known	chr5	+	1470	2	FSM	ENSG00000164615.6	ENST00000676829.1	1470	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTACAGGCGTGAGCCAC	-5	True	NA	NA	False	NA	NA	NA	134738514	134751950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134738793_134750758
transcript_150128.known	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	16.2138486760204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	-4	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
transcript_150130.known	chr5	+	3821	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	0	0	0	multi-exon	FALSE	canonical	2	256	junction_19	106.646603011462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATTTTTTTGCATTTC	18	False	NA	13	True	AGTAAA	-13	NA	134758803	134829296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_150136.nic	chr5	+	821	6	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-42	51692	-9	-290	5prime_fragment	FALSE	canonical	3	567	junction_4	56.2835677618255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGGAAATGAAATGGAGG	NA	False	NA	7	True	NA	NA	NA	134758761	134777604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573
transcript_150137.nic	chr5	+	885	6	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-42	51628	-9	-226	5prime_fragment	FALSE	canonical	3	567	junction_4	56.2835677618255	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAGTAAAAAAATTTAA	NA	False	NA	71	True	NA	NA	NA	134758761	134777668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573
transcript_150138.nic	chr5	+	655	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-42	55570	-9	-4168	5prime_fragment	FALSE	canonical	3	567	junction_4	60.8620366073959	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGAAAGCGAAAAGAAAGA	NA	False	NA	6	True	AAGAAA	-1	NA	134758761	134773726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_150139.nic	chr5	+	737	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-42	55488	-9	-4086	5prime_fragment	FALSE	canonical	3	567	junction_4	60.8620366073959	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATCGAAGAGATGAAAC	NA	False	NA	-4	True	AAAAAG	-30	NA	134758761	134773808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_150140.nic	chr5	+	547	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-42	58374	-9	-6972	5prime_fragment	FALSE	canonical	3	595	junction_1	56.9580742495936	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGGGGAAAGTTCT	NA	False	NA	-46	True	NA	NA	NA	134758761	134770922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_150141.nic	chr5	+	615	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-42	58306	-9	-6904	5prime_fragment	FALSE	canonical	3	595	junction_1	56.9580742495936	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGCGTATGTTTATT	NA	False	NA	22	True	AAAAAG	-33	NA	134758761	134770990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_150142.nic	chr5	+	517	3	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-42	62246	-9	-10844	5prime_fragment	FALSE	canonical	3	595	junction_1	66.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAATAGGTAATGTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	134758761	134767050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916
transcript_150143.known	chr5	+	2923	3	FSM	ENSG00000181904.9	ENST00000504727.1	2923	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATGTTTACTATGTT	16	False	NA	26	True	AATAAA	-16	NA	134846095	134859732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134846213_134854897_134855328_134857356
transcript_150148.known	chr5	+	1584	12	FSM	ENSG00000145833.16	ENST00000628477.2	1584	12	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_2	219.222367200502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGATGTGGCTCGATGC	NA	False	NA	NA	False	NA	NA	NA	134758770	134790122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134758956_134763903_134764093_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790105
transcript_150149.known	chr5	+	5083	2	FSM	ENSG00000181904.9	ENST00000394976.4	5083	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTTTACTATGTTTTT	-12	True	NA	29	True	AATAAA	-19	NA	134845967	134859735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134846213_134854897
transcript_150152.known	chr5	+	643	2	FSM	ENSG00000181904.9	ENST00000508791.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCCAGCTTTCTGTGGG	166	False	NA	NA	False	NA	NA	NA	134846245	134854922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134846864_134854897
transcript_150154.known	chr5	+	5674	23	FSM	ENSG00000145833.16	ENST00000452510.7	5674	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	150.081004298478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTTTCTTAAAATTA	-7	True	NA	9	True	AATAAA	-17	NA	134758778	134831121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816607_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_150155.nic	chr5	+	2147	6	NIC	ENSG00000113621.15	novel	3090	5	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	52.1589877202386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGAGTCCACCTCTT	508	False	NA	15	True	TATAAA	-18	NA	134874278	134901511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488_134900155_134901065
transcript_150157.nnic	chr5	+	2918	6	NNC	ENSG00000113621.15	novel	3090	5	NA	NA	-635	5	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_5	47.9207679404243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCACCTCTTATATT	NA	False	NA	20	True	TATAAA	-23	NA	134873735	134901516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488_134900385_134901072
transcript_150159.known	chr5	+	3090	5	FSM	ENSG00000113621.15	ENST00000358387.9	3090	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	15.0166574176812	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCCTGTAATCCCAG	-12	True	NA	5	True	AATAAA	-17	NA	134874370	134901635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_150160.known	chr5	+	1006	4	FSM	ENSG00000113621.15	ENST00000511070.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	59.4100627466051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTTAAGGAAACCCTTG	-12	True	NA	NA	False	NA	NA	NA	134874370	134900039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134874531_134893491_134893656_134896293_134896425_134899488
transcript_150163.known	chr5	+	2365	4	FSM	ENSG00000132570.15	ENST00000254908.11	2365	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	4.92160768674447	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTATCTTGGTGTGT	-1	True	NA	24	True	ATTAAA	-17	NA	134905130	134962644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585
transcript_150167.known	chr5	+	457	1	FSM	ENSG00000279799.1	ENST00000623591.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGACTTTTCTTTCCTTT	51	False	NA	8	True	AATAAA	-19	NA	134905234	134905691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134905200_134905700
transcript_150178.known	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	404.788660136373	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	780	False	NA	-1	True	NA	NA	NA	135399211	135334409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_150179.known	chr5	-	2789	9	FSM	ENSG00000113648.17	ENST00000511689.6	1917	9	-391	-481	262	481	multi-exon	FALSE	canonical	3	436	junction_5	200.878033580081	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGCGTGGAGCTTTC	369	False	NA	NA	False	NA	NA	NA	135399622	135333899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_150180.known	chr5	-	1881	9	FSM	ENSG00000113648.17	ENST00000304332.8	1881	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	310.593761004628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGACTGGTGTGTTC	-1	True	NA	-9	True	AGTAAA	-12	NA	135399887	135334382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399748
transcript_150184.known	chr5	-	1314	9	FSM	ENSG00000113648.17	ENST00000510038.1	1314	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	320.397385093886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCACTCCTACTGGG	2	True	NA	NA	False	AAGAAA	-8	NA	135399884	135334912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399785
transcript_150208.nic	chr5	-	933	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	-39	-122	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	368.619261569441	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAGTTAACTAATAT	714	False	NA	-11	True	AATAAA	-28	NA	135399277	135359843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_135359943_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_150209.nic	chr5	-	925	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	-28	-122	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	387.530850384844	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAGTTAACTAATAT	-7	True	NA	-11	True	AATAAA	-28	NA	135399266	135359843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_150212.known	chr5	-	924	5	FSM	ENSG00000113648.17	ENST00000423969.6	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	381.546196416633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAATAAGGCTTTGGTT	0	True	NA	NA	False	NA	NA	NA	135399229	135334855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135388921_135389127_135399061
transcript_150214.known	chr5	-	1772	8	FSM	ENSG00000113648.17	ENST00000360597.8	1772	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	358.508759463761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGAGTTGATTTAGT	7	True	NA	-8	True	NA	NA	NA	135399222	135334416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_150215.known	chr5	-	861	6	FSM	ENSG00000113648.17	ENST00000507868.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	403.821940959131	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGTGCTGCCGAGTGT	787	False	NA	NA	False	NA	NA	NA	135399204	135350813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135350914_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_150216.known	chr5	-	966	6	FSM	ENSG00000113648.17	ENST00000508785.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	415.270321597872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATATTTTTTGTTCC	814	False	NA	NA	False	NA	NA	NA	135399177	135359396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135359629_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_150217.known	chr5	+	1584	9	FSM	ENSG00000145832.15	ENST00000510147.2	1584	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	8.52844505170784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGGAAGAGCTGGAGTT	-7	True	NA	-51	True	AGTAAA	-41	NA	135834666	135883394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879978_135880098_135880772_135880911_135883061
transcript_150218.known	chr5	+	1464	8	FSM	ENSG00000145832.15	ENST00000433282.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	6.71276578541185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACATTGTTTCTCTGT	40	False	NA	3	True	AATAAA	-14	NA	135834713	135883448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135883061
transcript_150219.known	chr5	+	1734	8	FSM	ENSG00000145832.15	ENST00000681962.1	1734	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	7.85064666516234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGAGATTTTTTTCA	-11	True	NA	NA	False	AATAAA	-26	NA	135834662	135888637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135888031
transcript_150226.known	chr5	+	1148	5	FSM	ENSG00000145832.15	ENST00000412661.3	1148	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	6.89202437604511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGAGATTTTTTTCA	53	False	NA	NA	False	AATAAA	-26	NA	135834726	135888637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135888031
transcript_150228.known	chr5	-	1971	4	FSM	ENSG00000145824.13	ENST00000337225.5	1971	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTAGACTGCCACCT	293	False	NA	-1	True	AATAAA	-19	NA	135579279	135570682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135571869_135574571_135574686_135578433_135578540_135578714
transcript_150230.known	chr5	+	7013	8	FSM	ENSG00000113658.18	ENST00000545279.6	7013	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	50.7555164389014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	-35	True	NA	19	True	AATAAA	-13	NA	136132844	136182733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_150239.known	chr5	+	6937	7	FSM	ENSG00000113658.18	ENST00000545620.5	6937	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	43.4117879536576	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTGTCTTTTTTTGTT	-33	True	NA	20	True	AATAAA	-14	NA	136132846	136182734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_150250.known	chr5	+	669	2	FSM	ENSG00000113658.18	ENST00000507118.5	669	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGTGGAGAGTCCAGG	-33	True	NA	NA	False	AAAAAG	-27	NA	136132846	136154144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136132963_136153591
transcript_150251.known	chr5	-	1695	1	FSM	ENSG00000271824.2	ENST00000607574.2	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCTGAGAACGTGCTGGTA	-7	True	NA	NA	False	AATAAA	-21	NA	136193162	136191467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_136191500_136193200
transcript_150253.known	chr5	-	4488	9	FSM	ENSG00000152377.14	ENST00000282223.11	4488	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	13.9081810457011	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGAGTGTTTGTATT	NA	False	NA	-5	True	AATAAA	-16	NA	137267055	136975299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_136978845_136979331_136979470_136985139_136985203_136988421_136988644_136992483_136992601_137067714_137067830_137112434_137112562_137140579_137140695_137267009
transcript_150262.known	chr5	-	6805	15	FSM	ENSG00000146021.15	ENST00000309755.9	6805	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	10.0033157768118	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCAGTATTTCATTT	-6	True	NA	-11	True	AATAAA	-17	NA	137736089	137617499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137637293_137637396_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_150274.known	chr5	-	582	2	FSM	ENSG00000031003.11	ENST00000510804.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTTATTTTTGTAAAC	5722	False	NA	NA	False	NA	NA	NA	138032928	138020762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138021198_138032781
transcript_150275.known	chr5	+	1253	2	FSM	ENSG00000246323.2	ENST00000500267.2	1253	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTGTTATTTATTTGC	NA	False	NA	NA	False	NA	NA	NA	138032773	138037266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138032953_138036192
transcript_150277.known	chr5	-	1208	6	FSM	ENSG00000112981.5	ENST00000265191.4	1208	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	5.08330601085553	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAAGTAATTTTTTGG	-21	True	NA	-6	True	AATAAA	-17	NA	138139428	138115174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138786_138139370
transcript_150283.known	chr5	+	3095	19	FSM	ENSG00000112984.12	ENST00000394894.8	3095	19	0	0	0	0	multi-exon	TRUE	canonical	3	389	junction_8	57.2461923904977	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATCAAACATCATTC	-4	True	NA	82	True	ATTAAA	-26	NA	138179111	138187723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608_138181729_138182322_138182462_138182585_138182774_138182860_138182991_138183168_138183364_138183469_138183582_138183687_138183757_138183961_138184106_138184238_138184405_138184511_138184677_138184806_138184947_138185094_138185198_138185511_138185711_138185960_138186053_138186293_138186432_138187095
transcript_150304.known	chr5	-	3133	16	FSM	ENSG00000094880.11	ENST00000394886.7	3133	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	38.1325174737899	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTAATATAACTGTTT	4	True	NA	46	True	AATAAA	-16	NA	138213323	138187649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138189149_138189632_138189753_138189827_138189907_138191473_138191536_138191861_138191938_138192268_138192389_138192503_138192658_138198198_138198281_138198425_138198524_138198604_138198783_138201106_138201240_138201342_138201449_138202112_138202156_138206546_138206685_138212990_138213064_138213151
transcript_150307.known	chr5	-	1079	3	FSM	ENSG00000094880.11	ENST00000394884.7	1079	3	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_2	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTTTGAGTGTCATT	-16	True	NA	0	True	AATAAA	-21	NA	138213343	138205870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138206685_138212990_138213064_138213151
transcript_150308.known	chr5	-	2982	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_13	207.671230554451	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-4	True	NA	0	True	AATAAA	-19	NA	138178633	138156881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_150309.known	chr5	-	3198	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	201.778970248307	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-1	True	NA	0	True	AATAAA	-19	NA	138178630	138156881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_150310.known	chr5	-	2967	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	223.548701988325	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTAGCCTTTG	293	False	NA	-15	True	AATAAA	-4	NA	138178669	138156896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_150311.known	chr5	-	3005	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	223.499099550759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	363	False	NA	0	True	AATAAA	-19	NA	138178599	138156881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_150312.known	chr5	-	590	8	FSM	ENSG00000112983.18	ENST00000450756.5	590	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	190.469880847876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGAGGAAGGCTACA	1	True	NA	NA	False	AAAAAG	-23	NA	138178628	138170380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138172719_138172827_138177570_138177668_138178595
transcript_150313.known	chr5	-	1988	8	FSM	ENSG00000146013.11	ENST00000274721.8	1988	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.2314999074019	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGCTCTTTTTCCATT	6	True	NA	-12	True	ATTAAA	-13	NA	138274621	138252379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138253058_138253286_138253376_138253765_138253901_138254056_138254161_138257638_138257952_138259556_138259650_138264260_138264549_138274333
transcript_150317.nic	chr5	-	2141	14	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	50.4139081026012	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	6551	False	NA	-19	True	AATAAA	-16	NA	138331856	138285268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_150318.known	chr5	-	2093	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_13	51.7369312886993	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-2	True	NA	-19	True	AATAAA	-16	NA	138331804	138285268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
transcript_150319.nic	chr5	-	1833	14	NIC	ENSG00000158402.21	novel	2137	16	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	50.4139081026012	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGGCTACCAACTTGT	6551	False	NA	-9	True	ATTAAA	-16	NA	138331856	138285576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_150333.known	chr5	-	1556	11	FSM	ENSG00000158402.21	ENST00000415130.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	93.0273615663693	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTACCAACTTGTATCC	8	True	NA	-5	True	ATTAAA	-20	NA	138331794	138285572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331215_138331594
transcript_150334.nic	chr5	-	1920	11	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	93.7405461900025	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	6557	False	NA	-19	True	AATAAA	-16	NA	138331850	138285268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331219_138331594
transcript_150349.known	chr5	+	1686	5	FSM	ENSG00000120709.11	ENST00000434981.6	1686	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	53.6534015697048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGGGCCACACAGAC	NA	False	NA	NA	False	ACTAAA	-13	NA	138337510	138346972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138337853_138341183_138341414_138341808_138341867_138344824_138345610_138346701
transcript_150352.known	chr5	+	4143	5	FSM	ENSG00000120709.11	ENST00000239906.10	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	25.043711785596	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	1	True	NA	30	True	AATAAA	-33	NA	138338265	138349729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
transcript_150368.known	chr5	+	6724	24	FSM	ENSG00000120733.14	ENST00000314358.10	6724	24	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_11	34.17385772758	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGTGGACTAAATTAT	-23	True	NA	NA	False	ATTAAA	-16	NA	138352684	138437027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138352988_138372673_138372842_138375092_138375207_138377719_138377826_138379583_138379709_138381515_138381591_138386021_138386622_138391012_138392262_138393170_138393373_138398177_138398393_138399859_138400013_138415131_138415240_138417482_138417611_138418952_138419233_138420705_138420963_138424074_138424342_138425410_138425583_138426974_138427066_138427188_138427320_138427966_138428087_138429825_138429966_138430248_138430426_138431424_138431560_138435619
transcript_150373.nnic	chr5	+	6113	23	NIC	ENSG00000120733.14	novel	6724	24	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	66.0472533071701	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGTGGACTAAATTAT	-12	True	NA	NA	False	ATTAAA	-16	NA	138352695	138437027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_138352988_138372673_138372842_138375092_138375207_138377719_138377826_138379583_138379709_138381515_138381591_138391012_138392262_138393170_138393373_138398177_138398393_138399859_138400013_138415131_138415240_138417482_138417611_138418952_138419233_138420705_138420963_138424074_138424342_138425410_138425583_138426974_138427066_138427188_138427320_138427966_138428087_138429825_138429966_138430248_138430426_138431424_138431560_138435619
transcript_150379.nic	chr5	+	974	7	ISM	ENSG00000120733.14	ENST00000314358.10	6724	24	-45	50968	-45	4311	5prime_fragment	FALSE	canonical	3	231	junction_6	29.4981167007131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAGAGAAAGCATAG	NA	False	NA	19	True	AGTAAA	-16	NA	138352639	138386059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_138352988_138372673_138372842_138375092_138375207_138377719_138377826_138379583_138379709_138381515_138381591_138386021
transcript_15038.known	chr1	-	1148	6	FSM	ENSG00000163479.14	ENST00000484320.6	1148	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	723.584521669722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTTAGAGAAGTGCT	18	True	NA	-74	True	AATGAA	-35	NA	156020912	156009106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018131_156018369_156020012_156020168_156020887
transcript_150389.known	chr5	+	2099	8	FSM	ENSG00000132563.17	ENST00000254901.9	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	86.8524434818935	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTCTGTGCTTTGT	18	True	NA	34	True	AATAAA	-23	NA	138439086	138446969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138439241_138441015_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445233_138445376_138445467_138445599_138445682
transcript_150393.known	chr5	+	1021	8	FSM	ENSG00000132563.17	ENST00000506158.5	1021	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	118.317801031021	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAGCCTAGGTGTCTCA	33	True	NA	NA	False	NA	NA	NA	138439101	138445831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138439241_138440940_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445233_138445376_138445467_138445599_138445682
transcript_150403.known	chr5	+	3137	2	FSM	ENSG00000120738.8	ENST00000239938.5	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGATTGGGTATGTGTT	-1	True	NA	8	True	AATAAA	-4	NA	138465478	138469303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138466069_138466756
transcript_150406.known	chr5	-	3682	11	FSM	ENSG00000120705.13	ENST00000360541.10	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_10	75.1998005316504	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-13	True	NA	NA	False	ATTAAA	-16	NA	138543236	138506094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
transcript_15041.known	chr1	-	895	6	FSM	ENSG00000163479.14	ENST00000480567.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	730.650778416064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCCTTGGTTCCA	77	False	NA	NA	False	NA	NA	NA	156020889	156009359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020726
transcript_150413.known	chr5	-	4415	17	FSM	ENSG00000113013.16	ENST00000678300.1	4415	17	0	0	0	0	multi-exon	TRUE	canonical	1	21	junction_16	656.325516488389	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-26	True	NA	NA	False	CATAAA	-25	NA	138575417	138553755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574122_138575237
transcript_150417.known	chr5	-	4327	16	FSM	ENSG00000113013.16	ENST00000677425.1	4327	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	653.095650643065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-26	True	NA	NA	False	CATAAA	-25	NA	138575417	138553755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_15042.known	chr1	-	1008	6	FSM	ENSG00000163479.14	ENST00000532074.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	720.866811553979	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTATTCTGGGTTAGA	16	True	NA	-82	True	AATGAA	-27	NA	156020914	156009114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015074_156018269_156018369_156020012_156020168_156020887
transcript_150420.nic	chr5	-	1806	14	ISM	ENSG00000113013.16	ENST00000507115.6	2120	16	-14	1044	-14	-109	5prime_fragment	FALSE	canonical	3	2438	junction_2	150.394589478407	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGTTAAAAATGCAGAGA	241	False	NA	8	True	NA	NA	NA	138575445	138557450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_150422.known	chr5	-	2272	11	FSM	ENSG00000113013.16	ENST00000508003.2	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	2499	junction_1	118.330722975903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGACTTACCCAA	-28	True	NA	NA	False	NA	NA	NA	138575419	138559102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_150426.known	chr5	-	2120	16	FSM	ENSG00000113013.16	ENST00000507115.6	2120	16	0	0	0	0	multi-exon	FALSE	canonical	3	2438	junction_4	142.965947771566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTTGATGACTGTC	255	False	NA	NA	False	NA	NA	NA	138575431	138556406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_150440.known	chr5	+	3754	18	FSM	ENSG00000044115.21	ENST00000302763.12	3754	18	0	0	0	0	multi-exon	TRUE	canonical	3	1416	junction_4	142.057179383982	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGAGCCCAAAGTCGTC	-10	True	NA	26	True	AATAAA	-22	NA	138753424	138935034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_15045.known	chr1	-	1040	5	FSM	ENSG00000163479.14	ENST00000480176.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	730.57699799542	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGGATACCCAGTGTC	-5	True	NA	-96	True	AATGAA	-13	NA	156020935	156009128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156018131_156018369_156020012_156020168_156020887
transcript_150459.known	chr5	+	2741	17	FSM	ENSG00000044115.21	ENST00000521724.5	2741	17	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_2	405.491440839076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCCAGGTGGTGAATTT	-14	True	NA	-49	True	AATACA	-41	NA	138753420	138934213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138753511_138781922_138782030_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_15047.known	chr1	-	825	4	FSM	ENSG00000163479.14	ENST00000496742.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	792.114890656652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-3	True	NA	-72	True	AATGAA	-37	NA	156020933	156009104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156020012_156020168_156020887
transcript_150478.known	chr5	-	587	2	FSM	ENSG00000253404.1	ENST00000520838.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCATCTCAGACCCG	142	False	NA	-13	True	AATAAA	-15	NA	138753309	138744433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138744763_138753051
transcript_150479.known	chr5	-	1895	11	FSM	ENSG00000120725.13	ENST00000265195.9	1895	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	24.3195394693238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTGCCATTAAAGGAGAA	-16	True	NA	NA	False	NA	NA	NA	139198316	138946753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139196440_139196529_139198268
transcript_150480.known	chr5	-	1889	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.8973307677818	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCACACTAGTGCT	-2	True	NA	NA	False	ATTAAA	-17	NA	139198368	138946723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
transcript_150486.known	chr5	+	3970	18	FSM	ENSG00000280987.4	ENST00000361059.7	3970	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	1061.14825513552	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	-13	True	NA	5	True	AATAAA	-7	NA	139274102	139330394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_150488.known	chr5	+	2243	17	FSM	ENSG00000280987.4	ENST00000504203.5	2243	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	1096.83571688916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAACAAAACCAATAG	-12	True	NA	-23	True	AAGAAA	-23	NA	139274103	139329757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_150489.known	chr5	+	3249	17	FSM	ENSG00000280987.4	ENST00000509990.5	3249	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1019.7032177765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTTAATGATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	139273751	139329404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_150494.known	chr5	+	5069	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	0	0	0	0	multi-exon	FALSE	canonical	3	1711	junction_1	426.552057975654	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	-3	True	NA	12	True	AATGAA	-20	NA	139293739	139331677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_150501.known	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	683.254550378002	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	35	False	NA	52	True	NA	NA	NA	139293777	139330441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_150514.nic	chr5	+	2781	14	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	231	junction_1	718.34493371011	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	-11	True	NA	52	True	NA	NA	NA	139293702	139330441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_139293806_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_150522.nic	chr5	+	2584	13	ISM	ENSG00000015479.20	ENST00000510056.5	3040	14	-133	4271	-77	-766	5prime_fragment	FALSE	canonical	3	1711	junction_1	257.306925998246	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTAAAAATGAGGAAA	1631	False	NA	NA	False	AAGAAA	-20	NA	139293596	139325489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439
transcript_150542.known	chr5	+	801	7	FSM	ENSG00000281398.4	ENST00000506188.5	801	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	78.0222546599508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCTGCCTCCTAAATTCT	-13	True	NA	NA	False	NA	NA	NA	139274102	139282989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139278564_139278741_139279050_139279130_139279934_139280059_139282738
transcript_150547.known	chr5	+	865	6	FSM	ENSG00000281398.4	ENST00000507197.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	72.8516300435344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTGAGTTAGAATCT	2	True	NA	NA	False	NA	NA	NA	139274117	139283244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738
transcript_150549.known	chr5	+	2383	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	77.5806032459145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	15	True	NA	12	True	AATAAA	-13	NA	139274130	139284899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
transcript_150551.known	chr5	+	1264	5	FSM	ENSG00000281398.4	ENST00000648842.1	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	62.1384542775245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCGATTTTTTTTTT	-14	True	NA	13	True	AATAAA	-17	NA	139274101	139280947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_150552.known	chr5	+	1456	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	0	0	0	0	multi-exon	FALSE	canonical	3	3843	junction_3	248.415422673839	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	-6	True	NA	14	True	AATAAA	-16	NA	139341853	139369717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
transcript_150555.known	chr5	+	815	3	FSM	ENSG00000120727.13	ENST00000510409.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	3987	junction_2	220	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATTGCACCATTGCAC	-3	True	NA	NA	False	NA	NA	NA	139341856	139365090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139341981_139363758_139363923_139364563
transcript_150558.known	chr5	+	468	3	FSM	ENSG00000120727.13	ENST00000511706.5	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATAAAAGTGCTGAGA	18	True	NA	NA	False	NA	NA	NA	139341877	139368933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139341981_139363758_139363923_139368732
transcript_150559.known	chr5	-	4513	1	FSM	ENSG00000228672.4	ENST00000434752.4	4513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGAGGTGCCTGATT	0	True	NA	0	True	AATAAA	-34	NA	139395104	139390591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139390600_139395100
transcript_150560.known	chr5	-	680	6	FSM	ENSG00000170469.11	ENST00000450845.7	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	19.2208220427743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCTCTGCCTTCTC	-3	True	NA	-5	True	AATAAA	-33	NA	139404089	139396766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139396930_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
transcript_150561.known	chr5	-	646	4	FSM	ENSG00000170469.11	ENST00000451821.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	4.32049379893857	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTCTTAGTCCACCT	19	False	NA	-3	True	CATAAA	-34	NA	139404067	139401500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139401826_139401914_139402046_139402627_139402694_139403943
transcript_150562.known	chr5	-	5102	8	FSM	ENSG00000170464.10	ENST00000302060.10	5102	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	11.9146625497103	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACTTTTCCTTGGTTC	-16	True	NA	-8	True	ATTAAA	-20	NA	139439525	139410202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139414273_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_150569.known	chr5	-	1031	10	FSM	ENSG00000249751.4	ENST00000618155.3	1031	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	2.23330569358242	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATTACTTTTAAGGTC	-17	True	NA	-14	True	ATTAAA	-19	NA	139462743	139448559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139448909_139449077_139449175_139454601_139454639_139454824_139454924_139455322_139455437_139456473_139456519_139457544_139457605_139457756_139457808_139458138_139458184_139462609
transcript_150574.known	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	1957	junction_1	302.144005401398	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	-15	True	NA	10	True	AATAAA	-24	NA	139561338	139628434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_150583.nic	chr5	+	2468	4	NIC	ENSG00000171604.12	novel	2601	3	NA	NA	-96	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	262.182294511959	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAACTGCTTTTTCGGAA	9070	False	NA	45	True	CATAAA	-17	NA	139647807	139683114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_139648846_139679846_139679941_139680363_139681448_139682862
transcript_150589.known	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	50	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	-28	True	NA	35	True	AATAAA	-25	NA	139648348	139683882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139648846_139680363_139681448_139682862
transcript_150592.known	chr5	+	1892	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTCGTTTATCCATT	-19	True	NA	NA	False	AATGAA	-2	NA	139648932	139683593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139649010_139680363_139681448_139682862
transcript_150596.known	chr5	+	777	2	FSM	ENSG00000171604.12	ENST00000504844.1	777	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCAGTTTGCGCAGTC	287	False	NA	NA	False	NA	NA	NA	139648711	139681006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139648846_139680363
transcript_150598.known	chr5	-	577	2	FSM	ENSG00000250635.1	ENST00000514287.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACCCGCGCAGCCAAAC	1469	False	NA	NA	False	NA	NA	NA	139649728	139648998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139649182_139649334
transcript_150600.known	chr5	+	790	3	FSM	ENSG00000120306.11	ENST00000261811.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	29	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	28	True	NA	17	True	AATAAA	-17	NA	140175187	140243789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140175286_140194445_140194653_140243304
transcript_150602.known	chr5	+	665	4	FSM	ENSG00000120306.11	ENST00000509589.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	222.353072587021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCCATGTTTT	-4	True	NA	NA	False	GATAAA	-26	NA	140175155	140244810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140175286_140194445_140194653_140243304_140243464_140244641
transcript_150603.known	chr5	-	1336	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_3	54.3098108591399	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGACTGTGATCTG	-5	True	NA	14	True	NA	NA	NA	140303101	140245034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
transcript_150604.known	chr5	-	1091	3	FSM	ENSG00000113068.10	ENST00000510217.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	342.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTGCAAATTATGTT	-17	True	NA	-76	True	NA	NA	NA	140303113	140245124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140246058_140281448_140281534_140303040
transcript_150607.known	chr5	-	787	3	FSM	ENSG00000113068.10	ENST00000507185.1	787	3	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_2	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGATGGTGCTCCAAT	10	True	NA	NA	False	NA	NA	NA	140303086	140280959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140281534_140300415_140300583_140303040
transcript_150609.known	chr5	-	2358	6	FSM	ENSG00000113070.8	ENST00000230990.7	2358	6	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_5	2.33238075793812	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGTCTGTTTGTTTT	1	True	NA	0	True	AATAAA	-19	NA	140346603	140332842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140334281_140334657_140334749_140335871_140336028_140342634_140342813_140345910_140346085_140346282
transcript_15061.nnic	chr1	-	3531	11	NNC	ENSG00000160803.8	novel	3582	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	107.025277388101	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	-10	True	NA	NA	False	AATAAA	-23	NA	156053811	156035298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051794_156053593
transcript_150612.nic	chr5	+	4581	26	ISM	ENSG00000131503.21	ENST00000421134.5	4814	27	-21	2009	-4	0	5prime_fragment	FALSE	canonical	3	95	junction_11	91.6641172978827	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAGGAACAGAAAA	-1	True	NA	NA	False	AAAAAG	-19	NA	140401828	140524133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065
transcript_150615.nic	chr5	+	4736	26	NIC	ENSG00000131503.21	novel	4814	27	NA	NA	-182	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_2	95.4243071758973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAGGAACAGAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	140401631	140524133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140402274_140436103_140436258_140438502_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065
transcript_15062.known	chr1	-	3582	11	FSM	ENSG00000160803.8	ENST00000368309.4	3582	11	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	28.4281550579703	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	3	True	NA	NA	False	AATAAA	-23	NA	156053798	156035298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051858_156053593
transcript_150622.nic	chr5	+	4524	25	ISM	ENSG00000131503.21	ENST00000297183.10	7606	33	15	15285	-4	0	5prime_fragment	FALSE	canonical	3	67	junction_10	90.4622293034809	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAGGAACAGAAAA	-1	True	NA	NA	False	AAAAAG	-19	NA	140401828	140524133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065
transcript_150636.nnic	chr5	+	2068	12	NNC	ENSG00000131503.21	novel	4814	27	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	95.0117870025687	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTTGTTTCCTTAGTCT	3	True	NA	17	True	AATAAA	-19	NA	140401832	140472474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140472380
transcript_150638.known	chr5	+	2135	11	FSM	ENSG00000131503.21	ENST00000394723.7	2135	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	32.698012171996	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	24	False	NA	20	True	AATAAA	-22	NA	140401853	140472477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_150639.known	chr5	+	2035	11	FSM	ENSG00000131503.21	ENST00000394722.7	2035	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	99.6682497087212	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	39	False	NA	20	True	AATAAA	-22	NA	140401920	140472477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438493_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_150642.known	chr5	+	2064	10	FSM	ENSG00000131503.21	ENST00000616482.4	2064	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	100.445673542136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTCCTTAGTCTTC	-16	True	NA	19	True	AATAAA	-21	NA	140401813	140472476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140472238
transcript_150647.known	chr5	+	3649	10	FSM	ENSG00000131503.21	ENST00000433049.5	3649	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	60.7179270616732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAAGTGGGGTGTGAT	NA	False	NA	17	True	AATAAA	-13	NA	140524182	140539848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538235_140538918_140539084_140539358
transcript_150648.known	chr5	+	4079	13	FSM	ENSG00000131503.21	ENST00000431508.5	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	26.6374840320094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	88	False	NA	18	True	AATAAA	-14	NA	140510109	140539849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140539358
transcript_150649.known	chr5	+	8195	34	FSM	ENSG00000131503.21	ENST00000360839.7	8195	34	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_30	84.2931393016854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	3	True	NA	18	True	AATAAA	-14	NA	140401832	140539849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140539358
transcript_150650.nic	chr5	+	938	2	ISM	ENSG00000131503.21	ENST00000511151.5	1216	6	-27	9378	-4	-9378	5prime_fragment	FALSE	canonical	3	330	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTATGGCGGTGT	-1	True	NA	NA	False	AATAGA	-7	NA	140401828	140436596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103
transcript_150651.nic	chr5	+	1108	2	ISM	ENSG00000131503.21	ENST00000511151.5	1216	6	-32	9213	-9	-9213	5prime_fragment	FALSE	canonical	3	330	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATCAGCTAGTTATCAA	-6	True	NA	NA	False	NA	NA	NA	140401823	140436761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103
transcript_150652.known	chr5	+	4814	27	FSM	ENSG00000131503.21	ENST00000421134.5	4814	27	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_11	90.8762813978986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAACAAAACAAAAGAAACC	20	True	NA	NA	False	AAAAAG	-45	NA	140401849	140526142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995
transcript_150653.known	chr5	+	8246	36	FSM	ENSG00000254996.5	ENST00000532219.5	8246	36	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_30	88.5058466879968	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	26	False	NA	1	True	AGTAAA	-6	NA	140401907	140549569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
transcript_150654.known	chr5	-	978	5	FSM	ENSG00000213523.12	ENST00000520427.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	535.818066138125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACACCATCTCCTAT	6945	False	NA	NA	False	NA	NA	NA	140557677	140550681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557333_140557427
transcript_150656.known	chr5	+	693	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	34.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	4	True	NA	8	True	AGTAAA	-13	NA	140547661	140549576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140547841_140548905_140549077_140549233
transcript_150657.known	chr5	-	769	3	FSM	ENSG00000213523.12	ENST00000602875.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	609.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTACTCATAACATGC	5	True	NA	-91	True	NA	NA	NA	140557446	140550551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140557146
transcript_150659.known	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_4	185.576803507335	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-22	True	NA	-23	True	NA	NA	NA	140557473	140550067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
transcript_150660.known	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_2	64.546279693118	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-5	True	NA	-23	True	NA	NA	NA	140557456	140550067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
transcript_150665.known	chr5	-	2131	13	FSM	ENSG00000113108.20	ENST00000357560.9	2131	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	27.6810956350278	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	-21	True	NA	-1	True	AATAAA	-19	NA	140564598	140558267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140561850_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_150685.known	chr5	-	2801	10	FSM	ENSG00000113108.20	ENST00000510241.5	2801	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	19.6531654849861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATGTGAGTATATTGG	-19	True	NA	-2	True	AATAAA	-18	NA	140564596	140558268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751
transcript_150700.known	chr5	+	2789	3	FSM	ENSG00000176087.16	ENST00000612662.2	2789	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	368.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCCATGATTGTCT	-7	True	NA	8	True	AATAAA	-29	NA	140564818	140569089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140564859_140565747_140565972_140566564
transcript_150701.known	chr5	+	2666	3	FSM	ENSG00000176087.16	ENST00000323146.8	2666	3	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	145	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	2	True	NA	19	True	AATAAA	-40	NA	140564827	140569100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140564859_140565872_140565972_140566564
transcript_150707.known	chr5	+	1905	20	FSM	ENSG00000113141.19	ENST00000417647.7	1905	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	626	junction_7	72.4596745240618	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTTGAGCATGTC	-18	True	NA	52	True	ATTAAA	-17	NA	140647828	140662480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757_140660816_140661619_140661709_140661898_140662008_140662178_140662214_140662301
transcript_150721.known	chr5	+	1834	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	27.9610118167813	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	-4	True	NA	23	True	AATAAA	-23	NA	140639503	140645408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_150728.nic	chr5	+	1181	12	ISM	ENSG00000113141.19	ENST00000417647.7	1905	20	-21	3412	-21	-1817	5prime_fragment	FALSE	canonical	3	626	junction_7	66.2419806467168	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGAGATCGGGAACGAGA	-39	True	NA	-28	True	NA	NA	NA	140647807	140659068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938
transcript_150730.nic	chr5	+	2148	11	ISM	ENSG00000113119.13	ENST00000394671.8	1865	12	-39	0	-23	0	intron_retention	FALSE	canonical	3	62	junction_3	15.1158856836111	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTTGCCTCAGTGGTT	8999	False	NA	19	True	AATAAA	-19	NA	140639411	140645404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572
transcript_150749.nic	chr5	+	2239	10	NIC	ENSG00000113119.13	novel	1865	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	68	junction_5	11.9732211493548	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTTGCCTCAGTGGTT	-25	True	NA	19	True	AATAAA	-19	NA	140639426	140645404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140639613_140639738_140639852_140641664_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_150763.nic	chr5	+	691	7	ISM	ENSG00000113141.19	ENST00000508301.5	868	9	-34	1406	-21	-141	5prime_fragment	FALSE	canonical	3	665	junction_6	61.3704597777574	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAATATTATGGAAA	-39	True	NA	NA	False	AAGAAA	-5	NA	140647807	140654586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515
transcript_150766.known	chr5	+	994	3	FSM	ENSG00000113119.13	ENST00000511410.5	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGTTCCAGCCTTGG	1	True	NA	NA	False	NA	NA	NA	140639452	140642385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140639613_140639738_140639852_140641664
transcript_150768.known	chr5	-	649	3	FSM	ENSG00000131495.9	ENST00000252102.9	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_1	33.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGGTCCTCCTGCCT	-12	True	NA	76	True	NA	NA	NA	140647630	140645284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140645679_140647255_140647363_140647482
transcript_150769.known	chr5	-	627	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	771.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCAGCTGCTGAAGC	133	False	140647654	-8	True	AATAAA	-21	NA	140647645	140645368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140645726_140647255_140647363_140647482
transcript_150773.known	chr5	+	2363	15	FSM	ENSG00000112855.17	ENST00000645065.1	2363	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	51.7892117045586	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATAACATGTTAAATA	-12	True	NA	-22	True	NA	NA	NA	140691452	140699271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691516_140691606_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_150778.known	chr5	+	2468	13	FSM	ENSG00000112855.17	ENST00000230771.9	2468	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	17.5093229134907	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGGTAATTTGTTA	-10	True	NA	12	True	AATAAA	-13	NA	140691454	140699305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_150779.known	chr5	-	1902	13	FSM	ENSG00000170445.16	ENST00000507746.7	1902	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	137.679251846053	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGAGATGGTCCCATC	NA	False	NA	-103	True	NA	NA	NA	140691415	140674004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674669_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_150780.known	chr5	-	1896	13	FSM	ENSG00000170445.16	ENST00000457527.6	1896	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	125.512587903454	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-24	True	NA	-2	True	AATAAA	-18	NA	140691377	140673903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_150781.known	chr5	+	2346	12	FSM	ENSG00000112855.17	ENST00000642752.1	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	41.7705262057367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTTAAATAAAATATTAA	-12	True	NA	-13	True	NA	NA	NA	140691452	140699280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_150784.known	chr5	-	1789	12	FSM	ENSG00000170445.16	ENST00000438307.6	1789	12	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_10	140.007791990952	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACGGAGTCTGCGTGT	12	True	NA	-13	True	AATAAA	-7	NA	140691341	140673914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140690854_140690945_140691214
transcript_150786.known	chr5	-	2729	12	FSM	ENSG00000170445.16	ENST00000676327.1	2729	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	144.920839035581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-36	True	NA	NA	False	NA	NA	NA	140691389	140673034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_150790.known	chr5	-	1401	11	FSM	ENSG00000170445.16	ENST00000415192.6	1401	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	145.350232197957	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATATGTACTTCAA	12	True	NA	-93	True	NA	NA	NA	140691341	140674200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140683099_140683220_140690854_140690945_140691214
transcript_150794.known	chr5	-	2643	10	FSM	ENSG00000170445.16	ENST00000431330.7	2643	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	158.927268092074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	NA	False	NA	NA	False	NA	NA	NA	140691537	140673034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140690854_140690945_140691214
transcript_150795.known	chr5	-	5497	10	FSM	ENSG00000170445.16	ENST00000506579.6	5497	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_5	41.3855703367583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-36	True	NA	NA	False	NA	NA	NA	140691389	140673034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140676897_140676988_140677117_140677326_140677421_140677654_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_150798.nic	chr5	+	2378	8	NIC	ENSG00000120314.19	novel	2953	8	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	46.4415366512631	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	5844	False	NA	25	True	AGTAAA	-18	NA	140664798	140672344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332_140669691_140671268
transcript_150805.known	chr5	+	3852	7	FSM	ENSG00000120314.19	ENST00000358337.10	3852	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	16.4991582276861	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTCTAAGATCTTG	-1	True	NA	26	True	AGTAAA	-19	NA	140664903	140672345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332
transcript_150817.known	chr5	+	2477	6	FSM	ENSG00000120314.19	ENST00000506393.5	2477	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	54.7262277157854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	16	True	NA	25	True	AGTAAA	-18	NA	140664867	140672344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140665104_140668233_140668503_140668611_140668792_140668890_140669249_140669332_140669691_140671268
transcript_150818.known	chr5	+	1544	6	FSM	ENSG00000146007.11	ENST00000274712.8	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_5	25.7013618316229	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTGTGAATATTTGT	-1	True	NA	47	True	NA	NA	NA	140700446	140706686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140703992_140704425_140704572_140705612
transcript_150831.known	chr5	-	4247	2	FSM	ENSG00000170445.16	ENST00000674721.1	4247	2	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATGGTGGCTCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	140691405	140686888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140690945_140691214
transcript_150833.known	chr5	-	1595	4	FSM	ENSG00000256453.2	ENST00000542735.2	1595	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTGTGCTGTCTTG	2	True	NA	NA	False	ATTAAA	-18	NA	140673576	140670793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140671751_140672444_140672907_140673270_140673389_140673518
transcript_150834.known	chr5	-	1229	3	FSM	ENSG00000170445.16	ENST00000502888.2	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACAGAGGTCTTGCTA	0	True	NA	NA	False	AATACA	-3	NA	140691353	140682219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140683220_140690854_140690945_140691214
transcript_150835.known	chr5	+	5370	4	FSM	ENSG00000204969.7	ENST00000526136.2	5370	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	65.1169887373658	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-2	True	NA	NA	False	AATAAA	-20	NA	140794851	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140797353_140978948_140979008_140982474_140982564_141009626
transcript_150836.known	chr5	+	5374	4	FSM	ENSG00000204967.12	ENST00000530339.2	5374	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	61.8834029086601	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-7	True	NA	NA	False	AATAAA	-20	NA	140807067	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140809573_140978948_140979008_140982474_140982564_141009626
transcript_150838.known	chr5	+	2808	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	6	True	NA	NA	False	NA	NA	NA	140807080	140817546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140809573_140817230
transcript_150839.known	chr5	+	5395	4	FSM	ENSG00000081842.18	ENST00000529310.6	5395	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.8202166679401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-8	True	NA	NA	False	AATAAA	-20	NA	140827959	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140830486_140978948_140979008_140982474_140982564_141009626
transcript_150840.known	chr5	+	3267	1	FSM	ENSG00000081842.18	ENST00000378126.4	3267	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTGGCATTGCGGCTC	-10	True	NA	3	True	AGTAAA	-18	NA	140827957	140831224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140828000_140831200
transcript_150841.known	chr5	+	2922	1	FSM	ENSG00000204963.6	ENST00000356878.5	2922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTTCAATTTTGCC	-2	True	NA	NA	False	TATAAA	-17	NA	140834247	140837169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140834200_140837200
transcript_150842.known	chr5	+	3788	4	FSM	ENSG00000250120.8	ENST00000506939.6	3788	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.8202166679401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCCAAGACTTCTGC	89	False	NA	65	True	NA	NA	NA	140856009	141011628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140857648_140978948_140979008_140982474_140982564_141009626
transcript_150844.known	chr5	+	5409	4	FSM	ENSG00000250120.8	ENST00000307360.6	5409	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.8202166679401	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-24	True	NA	NA	False	AATAAA	-20	NA	140855896	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140858437_140978948_140979008_140982474_140982564_141009626
transcript_150847.known	chr5	+	5407	4	FSM	ENSG00000249158.7	ENST00000398640.7	5407	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	54.0637483799347	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	0	True	NA	NA	False	AATAAA	-20	NA	140868956	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140871495_140978948_140979008_140982474_140982564_141009626
transcript_150848.nnic	chr5	-	2062	2	Genic_Genomic	ENSG00000278915.1	novel	577	1	NA	NA	27	5315	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCTAAAGTTCCATTGA	-9	True	NA	NA	False	TATAAA	-14	NA	140875895	140870030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr5_-_140871438_140875240
transcript_150853.known	chr5	+	5401	4	FSM	ENSG00000251664.5	ENST00000398631.3	5401	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	44.0479536666827	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-5	True	NA	NA	False	AATAAA	-20	NA	140875307	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140877840_140978948_140979008_140982474_140982564_141009626
transcript_150856.known	chr5	+	5896	4	FSM	ENSG00000248383.5	ENST00000253807.3	5896	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	67.4306227828936	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	140926298	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140929326_140978948_140979008_140982474_140982564_141009626
transcript_150857.known	chr5	+	5725	4	FSM	ENSG00000243232.6	ENST00000289269.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	55.4396568852618	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-12	True	NA	NA	False	AATAAA	-20	NA	140966475	141012347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140969332_140978948_140979008_140982474_140982564_141009626
transcript_150859.known	chr5	+	3355	1	FSM	ENSG00000113205.5	ENST00000231130.3	3355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTTCTTTTCCATTT	-1	True	NA	NA	False	ATTAAA	-19	NA	141100472	141103827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141100500_141103800
transcript_150860.known	chr5	+	3295	1	FSM	ENSG00000120324.9	ENST00000239446.6	3295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTGGAGATATTCATT	-9	True	NA	16	True	AATAAA	-29	NA	141192352	141195647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141192400_141195600
transcript_150861.known	chr5	+	3971	1	FSM	ENSG00000113248.6	ENST00000231173.6	3971	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGCCTGTTTCTCTGG	-6	True	NA	15	True	AATAAA	-15	NA	141245394	141249365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141245400_141249400
transcript_150862.known	chr5	-	603	2	FSM	ENSG00000178913.9	ENST00000624761.2	1508	2	0	905	0	-905	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGGCGTCATGGAATC	-8	True	NA	NA	False	NA	NA	NA	141320781	141319899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141320239_141320517
transcript_150863.known	chr5	-	2295	1	FSM	ENSG00000178913.9	ENST00000313368.8	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-11	True	NA	-5	True	AATAAA	-25	NA	141320784	141318489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141318500_141320800
transcript_150864.known	chr5	+	3148	1	FSM	ENSG00000272070.2	ENST00000606901.1	3148	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTGAGACCTTTCAT	5293	False	NA	NA	False	ACTAAA	-17	NA	141326209	141329357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141326200_141329400
transcript_150865.known	chr5	+	4748	4	FSM	ENSG00000254221.3	ENST00000523390.2	4748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.72839655999	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-16	True	NA	24	True	AATAAA	-17	NA	141350098	141512975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141352670_141494806_141494866_141505392_141505482_141510946
transcript_150866.known	chr5	+	4761	4	FSM	ENSG00000253953.3	ENST00000519479.2	4761	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	96.1491896308371	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	4762	False	NA	24	True	AATAAA	-17	NA	141387697	141512975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141390282_141494806_141494866_141505392_141505482_141510946
transcript_150867.known	chr5	+	4725	1	FSM	ENSG00000253953.3	ENST00000615384.1	4725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGCTGTTTCTTTTA	4762	False	NA	4	True	AATAAA	-15	NA	141387697	141392422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141387700_141392400
transcript_150868.known	chr5	+	4599	4	FSM	ENSG00000253305.3	ENST00000520790.2	4777	4	182	-4	182	4	multi-exon	FALSE	canonical	3	21	junction_1	91.9710099252295	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTTTCTGTATAAGCGAT	151	False	NA	28	True	AATAAA	-21	NA	141408202	141512979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141410621_141494806_141494866_141505392_141505482_141510946
transcript_150870.known	chr5	+	4802	4	FSM	ENSG00000253846.3	ENST00000398610.3	4802	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	100.332779621949	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-1	True	NA	24	True	AATAAA	-17	NA	141412986	141512975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141415612_141494806_141494866_141505392_141505482_141510946
transcript_150871.known	chr5	+	4775	4	FSM	ENSG00000254122.3	ENST00000398594.4	4775	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	85.9470120998333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-19	True	NA	24	True	AATAAA	-17	NA	141417676	141512975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141420275_141494806_141494866_141505392_141505482_141510946
transcript_150872.known	chr5	+	4787	4	FSM	ENSG00000253873.6	ENST00000398587.7	4787	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	83.6341238171756	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	9	True	NA	24	True	AATAAA	-17	NA	141421050	141512975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141423661_141494806_141494866_141505392_141505482_141510946
transcript_150873.known	chr5	+	4758	4	FSM	ENSG00000240184.7	ENST00000308177.5	4758	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	74.8702581507207	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-4	True	NA	24	True	AATAAA	-17	NA	141475965	141512975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141478547_141494806_141494866_141505392_141505482_141510946
transcript_150874.known	chr5	+	2346	4	FSM	ENSG00000240184.7	ENST00000617641.4	2346	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	98.9376908294643	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTTTCTGTATAAGCG	10	True	NA	26	True	AATAAA	-19	NA	141475979	141512977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141476147_141494806_141494866_141505392_141505482_141510946
transcript_150875.known	chr5	+	4763	4	FSM	ENSG00000242419.6	ENST00000306593.2	4763	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	95.6846672960488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-11	True	NA	24	True	AATAAA	-17	NA	141485029	141512975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141487616_141494806_141494866_141505392_141505482_141510946
transcript_150876.known	chr5	+	812	4	FSM	ENSG00000242419.6	ENST00000618371.4	812	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	100.332779621949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATCAGGCCCATCCAT	31	False	NA	NA	False	NA	NA	NA	141485071	141511496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141485186_141494806_141494866_141505392_141505482_141510946
transcript_150877.known	chr5	+	3633	1	FSM	ENSG00000253873.6	ENST00000622044.1	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGGCTATTTTTTTG	5	True	NA	NA	False	ATTAAA	-16	NA	141421046	141424679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141421000_141424700
transcript_150878.known	chr5	+	2785	1	FSM	ENSG00000254122.3	ENST00000612073.1	2785	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATGCCTCAGTCTTC	-2	True	NA	NA	False	ATTAAA	-12	NA	141417644	141420429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141417600_141420400
transcript_150881.nic	chr5	-	5862	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	-73	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	116.183868751323	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	61	False	NA	-23	True	AATAAA	-14	NA	141619128	141515021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_150882.known	chr5	-	5789	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	122.177915650507	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	5	True	NA	-23	True	AATAAA	-14	NA	141619055	141515021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141550498_141550508_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_150884.nic	chr5	-	4833	28	NNC	ENSG00000131504.18	novel	5735	28	NA	NA	3	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	116.183868751323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAGAAAACTGTT	-11	True	NA	NA	False	NA	NA	NA	141618996	141515918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_150891.nic	chr5	-	2646	19	ISM	ENSG00000131504.18	ENST00000389054.8	5735	28	-25	19360	-25	-5581	5prime_fragment	FALSE	canonical	0	0	junction_1	105.589351314946	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGTTAAAGGTGTT	0	True	NA	NA	False	AAGAAA	-24	NA	141619025	141534380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_150894.nnic	chr5	-	2740	18	NIC	ENSG00000131504.18	novel	5843	29	NA	NA	-73	-5581	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	88.8921822727069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGTTAAAGGTGTT	61	False	NA	NA	False	AAGAAA	-24	NA	141619128	141534380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141534434_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_150897.known	chr5	-	5735	28	FSM	ENSG00000131504.18	ENST00000389054.8	5735	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	116.183868751323	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTACAGCTTCCTGTG	-15	True	NA	-22	True	AATAAA	-15	NA	141619000	141515020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526462_141527572_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_150898.known	chr5	-	5762	26	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	119.082250566573	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	5	True	NA	-23	True	AATAAA	-14	NA	141619055	141515021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526462_141527572_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534443_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
transcript_150899.known	chr5	-	4668	27	FSM	ENSG00000131504.18	ENST00000518047.5	4668	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	127.541622165532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGGCTGAGAAATTGT	275	False	NA	NA	False	NA	NA	NA	141618914	141515974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526462_141527572_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
transcript_150902.known	chr5	-	1933	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_2	92.1940334073652	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	-3	True	NA	-23	True	AATAAA	-21	NA	141636849	141620880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
transcript_150908.nic	chr5	-	1815	14	NIC	ENSG00000171720.10	novel	1933	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	347.903747826147	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	19	False	141636893	-23	True	AATAAA	-21	NA	141636874	141620880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141636547_141636631_141636735
transcript_15093.known	chr1	+	621	4	FSM	ENSG00000116586.12	ENST00000368305.9	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_3	79.8262000988536	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	-32	True	NA	37	True	AATAAA	-16	NA	156054781	156058506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156054958_156055262_156055426_156057977_156058068_156058314
transcript_15095.known	chr1	+	521	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	791.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	-22	True	NA	37	True	AATAAA	-16	NA	156054791	156058506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156054958_156055262_156055426_156058314
transcript_150955.known	chr5	-	830	2	FSM	ENSG00000171720.10	ENST00000492506.1	830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGGCGTGGTGGCCCA	3	True	NA	NA	False	NA	NA	NA	141636843	141635908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141636631_141636735
transcript_15097.known	chr1	+	868	2	FSM	ENSG00000116586.12	ENST00000489664.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	1687	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGACTAGGGAAAAAAT	7	True	NA	NA	False	NA	NA	NA	156054820	156055993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156054958_156055262
transcript_150970.nic	chr5	-	2747	21	NIC	ENSG00000197948.11	novel	2477	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_3	18.9509894200804	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGGGGCCTACGGTGC	82	False	NA	-10	True	AATAAA	-44	NA	141651430	141640986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141641564_141641701_141641758_141642396_141642504_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649531_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_15098.known	chr1	+	623	3	FSM	ENSG00000116586.12	ENST00000487106.5	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_2	97.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	271	False	NA	37	True	AATAAA	-16	NA	156055084	156058506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156055426_156057977_156058068_156058314
transcript_150983.known	chr5	-	4319	20	FSM	ENSG00000197948.11	ENST00000435817.7	4319	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	21.4433480248593	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	-14	True	NA	-9	True	AATAAA	-19	NA	141651418	141639301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649537_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_15100.known	chr1	+	1100	5	FSM	ENSG00000132698.15	ENST00000361084.10	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	34.4564943080401	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	-10	True	NA	25	True	AATAAA	-16	NA	156061159	156070504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156061444_156065910_156066107_156068269_156068464_156069670_156069752_156070159
transcript_151030.known	chr5	+	2154	8	FSM	ENSG00000164620.9	ENST00000444782.5	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	52.0156962181727	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	-31	True	NA	13	True	AATAAA	-16	NA	141636949	141641063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_151033.nnic	chr5	+	2186	8	NNC	ENSG00000164620.9	novel	2154	8	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	67.7209158899936	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	-24	True	NA	13	True	AATAAA	-16	NA	141636956	141641063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141637742_141638130_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_151037.known	chr5	+	2536	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	32.2783036866699	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	16	True	NA	14	True	AATAAA	-17	NA	141636996	141641064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_15104.known	chr1	+	681	4	FSM	ENSG00000132698.15	ENST00000473336.5	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	50.1752484354144	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	176	False	NA	25	True	AATAAA	-16	NA	156061382	156070504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156061444_156068269_156068464_156069670_156069752_156070159
transcript_151042.known	chr5	+	1419	7	FSM	ENSG00000164620.9	ENST00000518856.1	1419	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	74.0197045837571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCATTACAGCTGCTT	8	True	NA	3	True	AATAAA	-6	NA	141637441	141641053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141637749_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_151047.known	chr5	+	2461	6	FSM	ENSG00000164620.9	ENST00000518025.5	2461	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	70.9743615681043	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	24	True	NA	14	True	AATAAA	-17	NA	141637004	141641064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141638410_141638794_141638861_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_15105.known	chr1	-	664	3	FSM	ENSG00000254726.3	ENST00000442784.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGGCGGGGACTTTGG	774	False	NA	NA	False	NA	NA	NA	156081704	156077065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156077355_156077467_156077683_156081544
transcript_151056.nic	chr5	-	5263	33	NIC	ENSG00000120318.16	novel	5258	33	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_32	30.6246811207888	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCATTCTCATTCATTC	NA	False	NA	-7	True	AATAAA	-16	NA	141682268	141653402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
transcript_151057.known	chr5	-	5258	33	FSM	ENSG00000120318.16	ENST00000239440.9	5258	33	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_32	30.8910478284162	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATTCTCATTCATTCA	-2	True	NA	-6	True	AATAAA	-17	NA	141682230	141653401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680504_141682172
transcript_15106.known	chr1	-	6591	2	FSM	ENSG00000254726.3	ENST00000532414.3	6591	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTCTTCGTTCTCTG	13	True	NA	-9	True	ATTAAA	-45	NA	156082465	156072012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156077683_156081544
transcript_151060.nnic	chr5	-	5203	33	NNC	ENSG00000120318.16	novel	5258	33	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	37.4874458152326	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCATTCTCATTCATTC	NA	False	NA	-7	True	AATAAA	-16	NA	141682268	141653402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662102_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
transcript_151061.nnic	chr5	-	5233	33	NNC	ENSG00000120318.16	novel	5258	33	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	37.6969696850755	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCATTCTCATTCATTC	NA	False	NA	-7	True	AATAAA	-16	NA	141682266	141653402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662102_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680504_141682172
transcript_151078.nic	chr5	-	5223	32	NIC	ENSG00000120318.16	novel	5258	33	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.1808671936494	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACCATTCTCATTCATT	NA	False	NA	-8	True	AATAAA	-15	NA	141682268	141653403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141654436_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
transcript_151111.known	chr5	-	4814	5	FSM	ENSG00000156453.14	ENST00000287008.8	4814	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	138.102317142038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCGCTGTGCCCTGGG	8	True	NA	0	True	AATACA	-20	NA	141878410	141853089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141854437_141857251_141857472_141863231_141865428_141868568_141869432_141878222
transcript_151123.nic	chr5	-	3894	3	NIC	ENSG00000156453.14	novel	3827	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	156.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	8	True	NA	-2	True	AATAAA	-17	NA	141878410	141862651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141865428_141868501_141869432_141878222
transcript_151127.known	chr5	-	3827	3	FSM	ENSG00000156453.14	ENST00000394536.4	3827	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_2	0.5	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	8	True	NA	-2	True	AATAAA	-17	NA	141878410	141862651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141865428_141868568_141869432_141878222
transcript_151128.nnic	chr5	-	3786	3	NNC	ENSG00000156453.14	novel	3827	3	NA	NA	358	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	147.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	59	False	NA	-2	True	AATAAA	-17	NA	141878888	141862651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141865428_141868568_141869432_141878741
transcript_151137.nnic	chr5	+	2388	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	63.1337455128809	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	NA	False	NA	14	True	AATAAA	-15	NA	141923796	141940146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939505
transcript_151138.nnic	chr5	+	2343	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-58	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	68.653921568586	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACTCTTGCCCTTGAG	NA	False	NA	17	True	AATAAA	-18	NA	141923796	141940149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939553
transcript_151142.nnic	chr5	+	2338	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-58	3	combination_of_known_splicesites	FALSE	canonical	3	51	junction_12	48.3034390310071	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACTCTTGCCCTTGAG	NA	False	NA	17	True	AATAAA	-18	NA	141923796	141940149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
transcript_151143.known	chr5	+	2203	13	FSM	ENSG00000081791.9	ENST00000194118.8	2203	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	57.2763161253313	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	20	True	NA	-12	True	NA	NA	NA	141923854	141940120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939553
transcript_151151.known	chr5	+	4907	12	FSM	ENSG00000081791.9	ENST00000432126.7	4907	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	26.3247361912174	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTCTGATCATGTC	-2	True	NA	8	True	AATAAA	-19	NA	141923870	141942047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520
transcript_151161.nic	chr5	+	1704	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-58	5124	-58	0	5prime_fragment	FALSE	canonical	3	184	junction_9	16.1986129569292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACAGGGTGGTTGTGAG	NA	False	NA	35	True	TTTAAA	-36	NA	141923796	141934996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_151162.nic	chr5	+	2191	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-58	4637	-58	487	5prime_fragment	FALSE	canonical	3	184	junction_9	16.1986129569292	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTACATAGGGGACTG	NA	False	NA	17	True	ATTAAA	-27	NA	141923796	141935483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_151163.nic	chr5	+	1816	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-113	151	-58	-151	5prime_fragment	FALSE	canonical	3	197	junction_5	12.5795428358579	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAGTGCAAAAGATGC	NA	False	NA	NA	False	ATTAAA	-17	NA	141923796	141934175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_151165.known	chr5	+	4170	9	FSM	ENSG00000013561.18	ENST00000394520.7	4170	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	26.3008436176485	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTCATGAAAGCCTT	-8	True	NA	9	True	AATAAA	-16	NA	141969104	141990292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_151171.known	chr5	+	2905	8	FSM	ENSG00000013561.18	ENST00000394514.6	2905	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	41.0494972501466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	-2	True	NA	20	True	AATAAA	-28	NA	141969110	141989185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_151174.known	chr5	+	4213	8	FSM	ENSG00000013561.18	ENST00000347642.7	4213	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	46.2592516946279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATTTCATGAAAGCC	2042	False	NA	7	True	AATAAA	-14	NA	141968885	141990290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141969168_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_151180.known	chr5	-	5706	4	FSM	ENSG00000113555.6	ENST00000231484.4	5706	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGCTCCAGGTAGGA	-12	True	NA	NA	False	AATAAA	-37	NA	141958202	141943580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141945806_141949431_141949584_141951492_141951591_141954971
transcript_151182.known	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	336.025266299778	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-3	True	NA	-29	True	ATTAAA	-16	NA	142013030	142000673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
transcript_151187.known	chr5	-	754	7	FSM	ENSG00000113552.16	ENST00000504139.5	754	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	285.8096200076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAGAAAGAAACTGA	-4	True	NA	NA	False	NA	NA	NA	142013031	142002085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142002130_142003087_142003215_142004985_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_151189.known	chr5	-	2267	7	FSM	ENSG00000113552.16	ENST00000311337.11	2267	7	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_6	121.525946017941	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCATTTGTGGATTTGA	0	True	NA	-26	True	ATTAAA	-19	NA	142013027	142000670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_151194.known	chr5	+	3574	8	FSM	ENSG00000131507.11	ENST00000253814.6	3574	8	0	0	0	0	multi-exon	TRUE	canonical	3	479	junction_7	32.1951954838746	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATGAATATCTTTACT	-14	True	NA	NA	False	AATAAA	-34	NA	142108778	142154440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_142109038_142131807_142131896_142132211_142132343_142135729_142135818_142137733_142137859_142140562_142140630_142144570_142144677_142151730
transcript_151202.known	chr5	-	4938	3	FSM	ENSG00000187678.10	ENST00000344120.4	4938	3	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGTTTGTGTGTTT	53	False	NA	-7	True	TATAAA	-34	NA	142325001	142310426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142315156_142319743_142319795_142324843
transcript_151203.known	chr5	-	4904	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGTGTGTTTGTGTG	0	True	NA	-10	True	TATAAA	-31	NA	142325021	142310429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142315156_142324843
transcript_151212.known	chr5	-	3556	9	FSM	ENSG00000113580.15	ENST00000231509.7	3556	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.70957197255464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAATCTCCAGTATTCT	-18	True	NA	NA	False	NA	NA	NA	143403689	143281161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143313998_143314169_143399655_143400853_143403210
transcript_151213.known	chr5	-	2594	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	4.12121038045863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGTTGTTTTATTT	6	True	NA	NA	False	TATAAA	-19	NA	143404544	143281810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
transcript_151218.known	chr5	-	3245	9	FSM	ENSG00000113580.15	ENST00000394466.6	3245	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	8.55040203733134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1224	False	NA	NA	False	NA	NA	NA	143404129	143281137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143313998_143314169_143399655_143400853_143403985
transcript_151219.known	chr5	-	3144	6	FSM	ENSG00000145817.17	ENST00000274496.10	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	30.0039997333689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTATGTGGCGCTTTTTT	-26	True	NA	-4	True	ATTAAA	-25	NA	144170659	144158161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170534
transcript_151224.known	chr5	-	793	4	FSM	ENSG00000145817.17	ENST00000508754.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	25.2234458831902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAACAACAGGTATAGC	-7	True	NA	NA	False	ATTAAA	-28	NA	144170640	144163862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_144164257_144165431_144165605_144169845_144169966_144170534
transcript_151226.known	chr5	-	1102	8	FSM	ENSG00000186314.12	ENST00000394450.6	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	17.38988681002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATGTAAGATATGTGT	17	True	NA	-14	True	AATAAA	-9	NA	145835336	145760255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145825997_145826201_145835176
transcript_151227.known	chr5	-	2140	8	FSM	ENSG00000186314.12	ENST00000334744.8	2140	8	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_5	21.3264232005888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	145835304	145759018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819378_145819415_145819944_145820019_145823076_145823135_145835176
transcript_151229.known	chr5	-	4817	7	FSM	ENSG00000186314.12	ENST00000683046.1	4817	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	8.40138877408571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	11	True	NA	-2	True	AATAAA	-15	NA	145835342	145756343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145835176
transcript_151236.known	chr5	+	3004	10	FSM	ENSG00000156463.18	ENST00000359120.9	3004	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.3778816176703	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTGAGTATGCTCCAC	-7	True	NA	NA	False	AATAAA	-15	NA	145936577	146063292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_145936695_145937822_145938307_146000057_146000328_146004057_146004154_146013746_146014062_146047771_146047864_146049074_146049246_146055980_146056214_146059865_146060225_146062425
transcript_151244.known	chr5	-	4768	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	286.355967031103	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-40	True	NA	-29	True	AATAAA	-14	NA	146182670	146113042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_151252.known	chr5	-	7140	32	FSM	ENSG00000133706.19	ENST00000674174.1	7140	32	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_31	296.621633297827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	146182696	146110565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182621
transcript_151254.known	chr5	-	7090	31	FSM	ENSG00000133706.19	ENST00000674270.1	7090	31	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_27	285.437226023516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-20	True	NA	NA	False	NA	NA	NA	146182650	146110565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_151259.known	chr5	-	7157	31	FSM	ENSG00000133706.19	ENST00000674309.1	7157	31	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_8	298.714633424983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-40	True	NA	NA	False	NA	NA	NA	146182670	146110565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_151265.nic	chr5	-	942	7	ISM	ENSG00000133706.19	ENST00000618084.2	1954	14	-84	8890	-48	2138	5prime_fragment	FALSE	canonical	3	1232	junction_2	125.580540778507	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTGGGAAGCGGTAA	NA	False	NA	20	True	AAGAAA	-6	NA	146182744	146160389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_151266.known	chr5	-	4669	32	FSM	ENSG00000133706.19	ENST00000674277.1	4669	32	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_31	373.602071466916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-15	True	NA	-29	True	AATAAA	-14	NA	146182645	146113042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182561
transcript_151268.nic	chr5	-	598	5	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-10	5601	0	-5601	5prime_fragment	FALSE	canonical	3	1318	junction_3	100.848896870516	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGATAGTGGTTGATAT	-30	True	NA	NA	False	GATAAA	-15	NA	146182660	146168128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_151270.nic	chr5	-	485	5	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-12	5716	1	-5716	5prime_fragment	FALSE	canonical	3	1318	junction_3	100.848896870516	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATAGAGCTGTATGGT	-32	True	NA	NA	False	NA	NA	NA	146182662	146168243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_151275.known	chr5	+	3311	20	FSM	ENSG00000275740.1	ENST00000506502.2	3311	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	17.1574103903223	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCTCTAAGGCACATTT	-16	True	NA	NA	False	NA	NA	NA	146203549	146339251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146314895_146315019_146339102
transcript_151281.known	chr5	+	6537	21	FSM	ENSG00000091009.8	ENST00000265271.7	6537	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	7.09559722644965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	-1	True	NA	17	True	NA	NA	NA	146203604	146289223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146284621_146284733_146285946
transcript_151282.nic	chr5	+	2767	17	ISM	ENSG00000091009.8	ENST00000265271.7	6537	21	-48	19772	-48	5932	5prime_fragment	FALSE	canonical	3	35	junction_9	6.10807610872687	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAACCAGAAGAAAGAG	-9	True	NA	21	True	AAAACA	-5	NA	146203556	146269451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419
transcript_151283.nic	chr5	+	2735	16	ISM	ENSG00000091009.8	ENST00000265271.7	6537	21	-48	19942	-48	5762	5prime_fragment	FALSE	canonical	3	35	junction_9	6.03103086821261	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACAAGAGCTCATTAT	-9	True	NA	NA	False	AATAGA	-11	NA	146203556	146269281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206
transcript_151287.known	chr5	+	2575	2	FSM	ENSG00000091010.6	ENST00000646991.2	2575	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGGTTTTATTTTTT	-3	True	NA	NA	False	AATAAA	-22	NA	146338838	146341728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146339233_146339547
transcript_151288.known	chr5	+	4684	23	FSM	ENSG00000113649.13	ENST00000679501.2	4684	23	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_13	243.53225387551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	10	True	NA	NA	False	AATAAA	-14	NA	146447332	146511961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146481149_146481201_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
transcript_151292.known	chr5	+	4654	22	FSM	ENSG00000113649.13	ENST00000296702.9	4654	22	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	179.52344322307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	-11	True	NA	NA	False	AATAAA	-14	NA	146447311	146511961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
transcript_151296.known	chr5	+	3632	21	FSM	ENSG00000113649.13	ENST00000394421.7	3632	21	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_11	101.328611457969	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGGGTTTGTTTTGTTT	10	True	NA	NA	False	AAGAAA	-6	NA	146447332	146511023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
transcript_151316.nic	chr5	+	2549	17	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-25	7177	-3	307	5prime_fragment	FALSE	canonical	3	524	junction_11	105.608652581121	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTTGAAAGGCAAGCCC	-15	True	NA	NA	False	AAAAAG	-5	NA	146447307	146503846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823
transcript_151323.nic	chr5	+	2526	16	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-25	7484	-3	0	5prime_fragment	FALSE	canonical	3	524	junction_11	99.4769431688681	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTTGTGTTTACTTG	-15	True	NA	NA	False	NA	NA	NA	146447307	146503539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374
transcript_151328.nic	chr5	+	2328	15	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-25	12370	-3	-4886	5prime_fragment	FALSE	canonical	3	524	junction_11	102.894859156405	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAAGATTCGAAGAC	-15	True	NA	77	True	AAGAAA	-1	NA	146447307	146498653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535
transcript_151331.nic	chr5	+	2137	14	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-25	18058	-3	0	5prime_fragment	FALSE	canonical	3	524	junction_11	102.901285493491	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAATAAAATAATG	-15	True	NA	-10	True	NA	NA	NA	146447307	146492965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919
transcript_151337.known	chr5	+	1984	11	FSM	ENSG00000113649.13	ENST00000507175.5	1984	11	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_5	94.5230659680482	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGATAATAAATAGCTT	-12	True	NA	NA	False	NA	NA	NA	146447310	146480216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027
transcript_151352.known	chr5	-	3047	1	FSM	ENSG00000173250.3	ENST00000311104.3	3047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTGTAAAGAAATAAAAAT	NA	False	NA	-55	True	AGTAAA	-36	NA	146516190	146513143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146513100_146516200
transcript_151353.nic	chr5	-	2144	11	NIC	ENSG00000156475.19	novel	10828	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	91.8529259196461	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAATTCTTCTTGTTTT	7	True	NA	-7	True	AATAAA	-15	NA	146878757	146589510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878590
transcript_151354.nic	chr5	-	2036	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	76.4397802194643	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAATTCTTCTTGTTTT	5	True	NA	-7	True	AATAAA	-15	NA	146878759	146589510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_151356.known	chr5	-	10828	10	FSM	ENSG00000156475.19	ENST00000394411.9	10828	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	72.6530738221203	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTCTCTCTCTCTCTC	7	True	NA	NA	False	AATAAA	-16	NA	146878757	146580741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878590
transcript_151357.known	chr5	-	2093	10	FSM	ENSG00000156475.19	ENST00000530902.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	40.9281212751222	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	5496	False	NA	0	True	AATAAA	-22	NA	146878894	146589503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
transcript_151365.nic	chr5	-	734	4	ISM	ENSG00000156475.19	ENST00000394411.9	10828	10	-170	117298	-33	0	5prime_fragment	FALSE	canonical	0	0	junction_3	91.8017186960874	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAATAAGATGGCT	5463	False	NA	NA	False	AATAGA	-8	NA	146878927	146698039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146698145_146701044_146701143_146878001_146878196_146878590
transcript_151366.nic	chr5	-	506	4	ISM	ENSG00000156475.19	ENST00000530902.5	2093	10	85	108536	-24	0	5prime_fragment	FALSE	canonical	3	112	junction_3	40.0998753115268	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAATAAGATGGCT	5581	False	NA	NA	False	AATAGA	-8	NA	146878809	146698039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146698145_146701044_146701143_146878001_146878196_146878700
transcript_151379.nnic	chr5	+	1385	5	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	28	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	31.42053468673	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	4	True	NA	NA	False	AATAAA	-18	NA	147042277	147097268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164_147095521_147096605
transcript_151385.nnic	chr5	+	2442	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	23.4710223230453	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAATAAAATGGGTTAA	4	True	NA	NA	False	NA	NA	NA	147042277	147097240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164
transcript_15139.known	chr1	+	1514	10	FSM	ENSG00000160789.24	ENST00000675431.1	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	59.669046093669	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	-3	True	NA	16	True	ATTAAA	-19	NA	156126174	156137866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_151396.known	chr5	-	5492	14	FSM	ENSG00000113657.13	ENST00000343218.10	5492	14	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_13	199.786365190361	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCCAGTCTTCTT	-2	True	NA	-15	True	ATTAAA	-20	NA	147510068	147390807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147509477
transcript_151398.known	chr5	-	5309	14	FSM	ENSG00000113657.13	ENST00000398514.7	5309	14	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_13	107.979945541074	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATTGTTCTCCAGTCTT	398	False	NA	-18	True	ATTAAA	-17	NA	147453959	147390810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
transcript_15140.known	chr1	+	472	4	FSM	ENSG00000160789.24	ENST00000470835.1	472	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	54	False	NA	5	True	AATAAA	-18	NA	156082630	156093811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156082664_156082947_156083185_156090998_156091098_156093708
transcript_151404.nnic	chr5	+	2021	5	NNC	ENSG00000280780.3	novel	2074	5	NA	NA	-45	19009	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	83.9687441849645	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCATTGTGAGGAGAAT	79	False	NA	11	True	AATAAA	-21	NA	147559948	147637981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147636512
transcript_151406.known	chr5	+	831	5	FSM	ENSG00000280780.3	ENST00000627433.3	2074	5	33	1210	13	-5	multi-exon	FALSE	canonical	3	83	junction_4	59.6741149913428	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAGAGCACTGGACAAA	32	False	NA	NA	False	NA	NA	NA	147560026	147660809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147660452
transcript_15141.known	chr1	+	3178	12	FSM	ENSG00000160789.24	ENST00000368300.9	3178	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	54.8953926320908	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	1	True	NA	18	True	AATACA	-14	NA	156114710	156140081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
transcript_151411.nnic	chr5	+	1031	4	FSM	ENSG00000280780.3	ENST00000689846.1	900	4	-140	9	-140	-9	multi-exon	FALSE	canonical	3	21	junction_3	94.6056141157713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAAAGTTTTGGAATT	1	True	NA	1	True	AATAAA	-24	NA	147559853	147618963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147618450
transcript_151412.known	chr5	+	720	4	FSM	ENSG00000280780.3	ENST00000630514.2	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	85.2655981168386	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCACTGGACAAAAGGTA	19	False	NA	NA	False	NA	NA	NA	147560013	147660814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147660452
transcript_151413.nnic	chr5	-	1259	4	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	47	61771	0	-1961	5prime_fragment	FALSE	canonical	3	72	junction_1	7.48331477354788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCCATTCTAGTTGAAG	6	True	NA	NA	False	NA	NA	NA	147782728	147650336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_147650548_147660947_147661446_147671677_147671955_147782455
transcript_151416.known	chr5	-	9153	22	FSM	ENSG00000176049.16	ENST00000616793.5	9153	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	19.8324043685719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTTTCATTGTTTAT	6	True	NA	NA	False	AATAAA	-22	NA	147782728	147585437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147591687_147601740_147601812_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_151417.known	chr5	-	6001	21	FSM	ENSG00000176049.16	ENST00000265272.9	6001	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	8.35224520712844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCTCTATTATCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	147782775	147588565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_15142.known	chr1	+	2029	10	FSM	ENSG00000160789.24	ENST00000677389.1	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	19.7002224716397	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	1	True	NA	16	True	ATTAAA	-19	NA	156114710	156137866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_151420.nic	chr5	-	2818	20	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	47	23755	0	20358	5prime_fragment	FALSE	canonical	3	66	junction_2	6.6806870116305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAGAAGAAAAGGTAGG	6	True	NA	NA	False	AATAAA	-2	NA	147782728	147612320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_151421.nic	chr5	-	1570	6	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	-29	56294	-29	3516	5prime_fragment	FALSE	canonical	3	72	junction_3	5.87877538267963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAAATGGTGTGTATCA	NA	False	NA	-10	True	ACTAAA	-19	NA	147782804	147644859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_151423.nic	chr5	-	1354	5	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	-29	59889	-29	-79	5prime_fragment	FALSE	canonical	3	72	junction_2	6.53834841531101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATAGCTGAATTGAATG	NA	False	NA	NA	False	AAGAAA	-7	NA	147782804	147648454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_151426.nnic	chr5	+	759	5	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	360.265440335317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870571	147882191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147870755_147871616_147871680_147872176_147872322_147881445_147881649_147882026
transcript_15143.known	chr1	+	2253	12	FSM	ENSG00000160789.24	ENST00000368299.7	2253	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	64.8576317536666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTATCTCATCTATCTC	12	False	NA	91	True	AAAACA	-20	NA	156114721	156139317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138608_156139079
transcript_151435.nnic	chr5	+	1138	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	373	0	at_least_one_novel_splicesite	FALSE	canonical	3	315	junction_1	282.35556779824	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147871054	147882191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147871680_147872176_147872322_147881445_147881649_147882026
transcript_151436.nnic	chr5	+	709	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-324	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	372.317964469439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147871173	147882191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147871370_147872176_147872322_147881445_147881649_147882026
transcript_151437.nnic	chr5	+	601	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	227	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_1	367.157550197006	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147871724	147882191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147871813_147872176_147872322_147881445_147881649_147882026
transcript_15144.known	chr1	+	3218	12	FSM	ENSG00000160789.24	ENST00000675881.1	3218	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	71.2830465627889	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	1	True	NA	18	True	AATACA	-14	NA	156114710	156140081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135860_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
transcript_151440.known	chr5	+	440	3	FSM	ENSG00000164265.9	ENST00000504320.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	472.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147870681	147882190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147870755_147881445_147881649_147882026
transcript_151441.nnic	chr5	+	657	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	453.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870672	147882191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147870962_147881445_147881649_147882026
transcript_151442.nnic	chr5	+	1303	3	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-314	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	451.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147871183	147882191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147872119_147881445_147881649_147882026
transcript_151443.known	chr5	+	549	3	FSM	ENSG00000164265.9	ENST00000507160.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	455.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147871497	147882190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147871680_147881445_147881649_147882026
transcript_151447.nnic	chr5	+	3376	2	Antisense	novelGene_ENSG00000288774.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	44	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	147861598	147874182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr5_+_147864767_147873974
transcript_15145.nnic	chr1	+	2984	14	NIC	ENSG00000196189.14	novel	3137	15	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	12.6135083032429	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGATGGGTGCTGTGT	59	False	NA	11	True	ATTAAA	-13	NA	156150002	156177743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156150094_156156413_156156575_156158069_156158133_156158387_156158487_156158718_156158825_156160442_156160560_156160904_156161030_156161345_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555_156175657_156176404
transcript_151450.known	chr5	+	672	3	FSM	ENSG00000164265.9	ENST00000514688.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	185.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147872017	147882191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147872322_147881445_147881649_147882026
transcript_15146.nnic	chr1	+	2974	14	NIC	ENSG00000196189.14	novel	1478	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	12.8505289647764	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGATGGGTGCTGTGT	128	False	NA	11	True	ATTAAA	-13	NA	156150182	156177743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156150264_156156413_156156575_156158069_156158133_156158387_156158487_156158718_156158825_156160442_156160560_156160904_156161030_156161345_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555_156175657_156176404
transcript_151462.known	chr5	+	4132	22	FSM	ENSG00000145868.17	ENST00000394370.7	4132	22	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_15	22.306563304102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	2	True	NA	21	True	AATAAA	-18	NA	148384001	148442836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427723_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_151464.known	chr5	+	4401	22	FSM	ENSG00000145868.17	ENST00000340253.10	4401	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_15	15.5061248962161	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	2	True	NA	21	True	AATAAA	-18	NA	148383957	148442836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427948_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_151467.known	chr5	+	3680	21	FSM	ENSG00000145868.17	ENST00000296701.10	3680	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	22.8111266709911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTTTCTCTTGCCTT	NA	False	NA	12	True	AATAAA	-9	NA	148383934	148442827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_151469.known	chr5	+	2013	1	FSM	ENSG00000169252.6	ENST00000305988.6	2013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGCACCTGTTTCT	-9	True	NA	4	True	AATAAA	-14	NA	148826610	148828623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148826600_148828600
transcript_151470.known	chr5	+	6024	19	FSM	ENSG00000157510.14	ENST00000296721.9	6024	19	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_11	4.93444682128592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCTGGACACAGTTACT	-17	True	NA	NA	False	AATAAA	-18	NA	149271858	149343637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149271985_149299508_149299638_149300270_149300355_149301132_149301231_149302417_149302527_149306305_149306405_149307401_149307614_149309955_149310136_149312111_149312205_149315820_149315915_149316150_149316304_149317728_149317941_149319581_149319728_149320390_149320464_149322605_149322718_149329665_149329831_149332694_149332874_149335593_149335723_149340006
transcript_151474.known	chr5	+	1289	9	FSM	ENSG00000157510.14	ENST00000455574.6	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3.95087015731978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGCATGAACAAACGAG	-5	True	NA	NA	False	AATAAA	-16	NA	149271870	149312375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149271985_149299508_149299638_149300270_149300355_149301132_149301231_149302417_149302527_149306305_149306405_149307401_149307614_149309955_149310136_149312111
transcript_151475.known	chr5	+	4020	4	FSM	ENSG00000164284.15	ENST00000329271.8	4020	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11.6141675934562	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	-11	True	NA	17	True	AATAAA	-22	NA	149345498	149354583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149345617_149348271_149348426_149349653_149349736_149350917
transcript_151477.known	chr5	+	4109	4	FSM	ENSG00000164284.15	ENST00000507562.1	4109	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	148.553768791715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	109	False	NA	17	True	AATAAA	-22	NA	149345618	149354583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149345826_149348271_149348426_149349653_149349736_149350917
transcript_151480.known	chr5	+	2507	6	FSM	ENSG00000145882.11	ENST00000274569.9	2507	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2.31516738055805	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGACCTGTTCTTTTCT	17	True	NA	11	True	AGTAAA	-16	NA	149358045	149369653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149358157_149362636_149362844_149364035_149364211_149365941_149366154_149367359_149367501_149367992
transcript_151487.known	chr5	-	2570	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	611.834650865738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTCTTTCATTTTTTT	102	False	NA	NA	False	AAAAAG	-24	NA	149551404	149495784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_151489.known	chr5	-	5444	11	FSM	ENSG00000113712.19	ENST00000261798.10	5444	11	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	538.718006010566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-7	True	NA	-64	True	AATAAA	-16	NA	149551439	149492981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_151505.known	chr5	-	4902	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	457.11505426917	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGCTAGGAGCAGTG	109	False	NA	NA	False	NA	NA	NA	149551397	149493361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_151506.known	chr5	-	5360	10	FSM	ENSG00000113712.19	ENST00000377843.8	5360	10	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	297.808663406557	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-7	True	NA	-64	True	AATAAA	-16	NA	149551439	149492981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_15152.known	chr1	+	3467	4	FSM	ENSG00000160785.14	ENST00000359511.5	3467	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	4.08248290463863	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTTGCGCGTATTT	-6	True	NA	14	True	ATTAAA	-21	NA	156194103	156212796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156194248_156199834_156200473_156207885_156208014_156210239
transcript_151527.nic	chr5	-	1289	6	ISM	ENSG00000113712.19	ENST00000606719.6	2476	11	-235	15931	-106	1414	5prime_fragment	FALSE	canonical	3	1309	junction_3	107.669865793545	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGACTCACATTATC	NA	False	NA	0	True	AATAGA	-29	NA	149551577	149511792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_15153.known	chr1	+	1352	2	FSM	ENSG00000160785.14	ENST00000684582.1	1352	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGCAGTGGGTAGATTC	-7	True	NA	NA	False	NA	NA	NA	156194102	156211446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156194248_156210239
transcript_151535.known	chr5	+	10569	12	FSM	ENSG00000155846.17	ENST00000309241.10	10569	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	5.90979016841637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCCCATGTGTGTTTT	6	True	NA	17	True	ATTAAA	-19	NA	149730309	149855022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759_149845915_149847457
transcript_151541.known	chr5	+	4803	11	FSM	ENSG00000155846.17	ENST00000394320.7	4803	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	6.19758017293847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCAATG	-3	True	NA	NA	False	NA	NA	NA	149730300	149847704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
transcript_151544.known	chr5	+	3004	11	FSM	ENSG00000155846.17	ENST00000360453.8	3004	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	7.21734023030645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAACCCTCGAGGAAT	-6	True	NA	NA	False	NA	NA	NA	149730297	149847562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759_149845915_149847457
transcript_15155.known	chr1	-	1969	8	FSM	ENSG00000160781.17	ENST00000292291.10	1969	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	17.0245920566067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTTCTGGAGTTTA	2	True	NA	82	True	CATAAA	-24	NA	156248056	156243319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245534_156245662_156245781_156245988_156246122_156246251_156246680_156246757_156247956
transcript_151552.nnic	chr5	+	3731	10	NIC	ENSG00000155846.17	novel	4803	11	NA	NA	-10	-906	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	9.35447341326631	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTACTGGAGAGAATCCA	-16	True	NA	NA	False	AAGAAA	-11	NA	149730287	149846656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
transcript_151555.nic	chr5	+	3660	10	ISM	ENSG00000155846.17	ENST00000360453.8	3004	11	-19	906	-19	-906	5prime_fragment	FALSE	canonical	2	5	junction_3	7.60116950066092	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTACTGGAGAGAATCCA	-25	True	NA	NA	False	AAGAAA	-11	NA	149730278	149846656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_149730421_149820432_149820607_149826672_149826886_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
transcript_151563.known	chr5	+	5275	21	FSM	ENSG00000113716.13	ENST00000503427.5	5275	21	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	41.5925474093617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAAGAGCATCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	150000320	150052823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024409_150024504_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_151566.known	chr5	+	5258	20	FSM	ENSG00000113716.13	ENST00000502717.6	5258	20	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	30.5914912219077	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	2	True	NA	14	True	AATAAA	-14	NA	150000738	150053128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_151575.nnic	chr5	+	4682	18	NIC	ENSG00000113716.13	novel	5258	20	NA	NA	-21	0	intron_retention	FALSE	canonical	3	9	junction_3	42.2631400913446	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	-19	True	NA	14	True	AATAAA	-14	NA	150000717	150053128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150001180_150004850_150004990_150006472_150006648_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_151581.known	chr5	+	8054	3	FSM	ENSG00000155850.9	ENST00000286298.5	8054	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTCTGTATTTAAATT	11	True	NA	NA	False	AATAAA	-18	NA	149960757	149987400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149960980_149977627_149978352_149980292
transcript_151585.nic	chr5	+	798	2	ISM	ENSG00000113716.13	ENST00000503427.5	5275	21	164	47870	164	-35870	5prime_fragment	FALSE	canonical	3	129	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATAAAATACATGGAGAAA	NA	False	NA	NA	False	AAGAAA	-3	NA	150000484	150004953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150001180_150004850
transcript_151586.known	chr5	-	3493	2	FSM	ENSG00000164296.7	ENST00000296736.4	3493	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTACATATTTTAAAT	-8	True	NA	NA	False	AATAAA	-25	NA	150000654	149993117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149996430_150000473
transcript_151587.known	chr5	-	2429	2	FSM	ENSG00000164296.7	ENST00000515406.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTTGAGCCAATTTAAG	-8	True	NA	NA	False	AATAAA	-15	NA	150000654	149994727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149996430_149999927
transcript_15159.known	chr1	+	1007	7	FSM	ENSG00000260238.6	ENST00000490491.5	1007	7	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_6	600.64088457432	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCAGTTTATGGAGT	NA	False	NA	30	True	AATAAA	-30	NA	156212981	156243332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_151590.known	chr5	-	5700	23	FSM	ENSG00000113721.14	ENST00000261799.9	5700	23	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_13	5.88122801591697	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGTGGTCTCTCTCGG	-4	True	NA	-1	True	ATTAAA	-21	NA	150155845	150113838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150115947_150117617_150117851_150118746_150118853_150119466_150119567_150120011_150120124_150120887_150121011_150121203_150121323_150121879_150122041_150123041_150123202_150124249_150124361_150124726_150124832_150125444_150125578_150126519_150126615_150129756_150129969_150130538_150130663_150131978_150132095_150132749_150132943_150133585_150133761_150133880_150134009_150134749_150135017_150135554_150135879_150137007_150137054_150155396
transcript_151594.known	chr5	+	1775	3	FSM	ENSG00000113722.18	ENST00000231656.13	1775	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACCTTCCCCAGCAAT	-9	True	NA	NA	False	ATTAAA	-27	NA	150166777	150184558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150167322_150182767_150182914_150183473
transcript_151595.known	chr5	-	3113	2	FSM	ENSG00000183876.9	ENST00000328668.8	3113	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGATGCAGTGCTGTC	20	True	NA	-7	True	ATTAAA	-17	NA	150302905	150296342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150298613_150302062
transcript_151598.known	chr5	+	5026	27	FSM	ENSG00000070814.22	ENST00000643257.2	5026	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	224.725463674388	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCCCAGTGCATCTGG	-6	True	NA	24	True	AATAAA	-19	NA	150357696	150400293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_15160.known	chr1	+	852	7	FSM	ENSG00000260238.6	ENST00000368276.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	568.924252915584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGGGTCCCCATCAT	6	True	NA	-39	True	NA	NA	NA	156213006	156243263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156242552_156242592_156242761_156242832_156243032
transcript_151604.known	chr5	+	4832	26	FSM	ENSG00000070814.22	ENST00000323668.11	4832	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	287.527250882416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCACATGTTTCTTG	-31	True	NA	39	True	AATAAA	-34	NA	150357671	150400308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_151607.nic	chr5	+	4514	25	NIC	ENSG00000070814.22	novel	5026	27	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	294.720250477748	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	-32	True	NA	-2	True	NA	NA	NA	150357670	150396824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383061_150383173_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_151608.nnic	chr5	+	4476	25	NNC	ENSG00000070814.22	novel	5026	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	273.98017973731	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAGAAGAAAAAGAAGAAAA	-32	True	NA	NA	False	AAAAAG	-30	NA	150357670	150398429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393532_150396281_150396843_150398353
transcript_151609.known	chr5	+	5095	27	FSM	ENSG00000070814.22	ENST00000377797.7	5095	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	255.477615712566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGGCACATGTTTCTT	NA	False	NA	38	True	AATAAA	-33	NA	150357638	150400307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_151616.nnic	chr5	+	4401	24	NNC	ENSG00000070814.22	novel	5026	27	NA	NA	-1	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	278.159614729638	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACCGCTTCTCCCAG	-32	True	NA	17	True	AAGAAA	-12	NA	150357670	150396843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393532_150396281
transcript_15162.known	chr1	-	2029	7	FSM	ENSG00000160781.17	ENST00000492619.5	2029	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	18.3817542386163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTAGAACTGAAGAAGG	5371	False	NA	-13	True	AATAAA	-22	NA	156248076	156243414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245534_156245662_156245781_156246251_156246680_156246757_156247956
transcript_151629.known	chr5	+	4825	26	FSM	ENSG00000070814.22	ENST00000445265.6	4825	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	260.71693769297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTCCCAGTGCATCTG	-37	True	NA	23	True	AATAAA	-18	NA	150357665	150400292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_151633.nnic	chr5	+	4287	23	NNC	ENSG00000070814.22	novel	4644	26	NA	NA	-1	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	315.476066858218	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACCGCTTCTCCCAG	-32	True	NA	17	True	AAGAAA	-12	NA	150357670	150396843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393532_150396281
transcript_151634.nic	chr5	+	4289	23	ISM	ENSG00000070814.22	ENST00000439160.6	4644	26	-43	3218	-1	0	5prime_fragment	FALSE	canonical	0	0	junction_15	268.546304701061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	-32	True	NA	-2	True	NA	NA	NA	150357670	150396824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_15164.known	chr1	+	837	6	FSM	ENSG00000160783.19	ENST00000497069.2	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	599.783494271058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGAATTTGCTGGAGG	25	False	NA	NA	False	NA	NA	NA	156213025	156239718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156225556_156225669_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_151646.nnic	chr5	+	4170	23	NNC	ENSG00000070814.22	novel	4825	26	NA	NA	-1	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	310.311816651766	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACCGCTTCTCCCAG	-32	True	NA	17	True	AAGAAA	-12	NA	150357670	150396843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393532_150396281
transcript_151657.known	chr5	+	4194	23	FSM	ENSG00000070814.22	ENST00000650162.1	4194	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	297.888616934541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAGAAGAAAAAGAAGAAAA	NA	False	NA	NA	False	AAAAAG	-30	NA	150357628	150398429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353
transcript_151668.known	chr5	+	3526	19	FSM	ENSG00000070814.22	ENST00000513538.2	3526	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	354.334139053472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	1	True	NA	3	True	AGTAAA	-17	NA	150357703	150384253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383064_150383173_150383737
transcript_151672.known	chr5	+	3400	18	FSM	ENSG00000070814.22	ENST00000394269.7	3400	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	307.560430948328	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	15	True	NA	-1	True	AGTAAA	-13	NA	150357717	150384249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
transcript_151694.known	chr5	-	3092	9	FSM	ENSG00000019582.17	ENST00000009530.13	1653	9	159	-1598	0	1596	multi-exon	FALSE	canonical	2	21	junction_2	178.858708202872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTCCTGTGTTGG	2	True	NA	NA	False	AATACA	-18	NA	150412751	150400040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_151695.known	chr5	-	1270	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	41.0763351106504	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTAGAATAAAAGGT	3	True	NA	-38	True	NA	NA	NA	150412750	150401669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_151696.known	chr5	-	1138	6	FSM	ENSG00000019582.17	ENST00000377795.7	1138	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	172.914545368514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTCCTGGCTCTTCT	135	False	NA	-5	True	AATAAA	-18	NA	150412769	150401636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150402251_150402562_150402626_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_151697.known	chr5	+	4467	26	FSM	ENSG00000070814.22	ENST00000504761.6	4467	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	254.096529689014	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCACCAGCACCAGGCAC	44	False	NA	NA	False	NA	NA	NA	150357746	150399048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021
transcript_151698.known	chr5	-	712	5	FSM	ENSG00000164587.13	ENST00000312037.6	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	2915	junction_4	10676.4559516489	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-5	True	NA	-15	True	AATAAA	-16	NA	150449691	150444237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449485
transcript_151699.known	chr5	-	2314	5	FSM	ENSG00000164587.13	ENST00000401695.8	2314	5	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_4	11381.0263898956	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	60	False	NA	NA	False	AATAAA	-41	NA	150449696	150442634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449491
transcript_151700.known	chr5	-	2146	5	FSM	ENSG00000164587.13	ENST00000407193.7	2146	5	0	0	0	0	multi-exon	FALSE	canonical	3	22852	junction_4	3219.53416661479	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	0	True	NA	NA	False	AATAAA	-41	NA	150449739	150442634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449702
transcript_151703.nic	chr5	-	2744	3	NIC	ENSG00000164587.13	novel	669	5	NA	NA	-325	0	intron_retention	FALSE	canonical	3	22852	junction_2	4022.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	NA	False	NA	-15	True	AATAAA	-16	NA	150450064	150444237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_150445686_150446801_150447736_150449702
transcript_151709.nnic	chr5	+	4574	15	NNC	ENSG00000070614.15	novel	777	2	NA	NA	-392	558	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_9	24.5136363550359	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTTTTTTTTTCT	12	False	NA	9	True	NA	NA	NA	150485425	150554272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150486024_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227_150539357_150540081_150540265_150541569_150541667_150542847_150542972_150545311_150545487_150548217_150548389_150549677_150549788_150551752_150551856_150553212
transcript_151710.nic	chr5	+	4213	15	NIC	ENSG00000070614.15	novel	777	2	NA	NA	-51	558	combination_of_known_junctions	FALSE	canonical	2	55	junction_1	28.8405185495005	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTTTTTTTTTCT	-13	True	NA	9	True	NA	NA	NA	150485766	150554272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150486004_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227_150539357_150540081_150540265_150541569_150541667_150542847_150542972_150545311_150545487_150548217_150548389_150549677_150549788_150551752_150551856_150553212
transcript_151724.nnic	chr5	+	2411	7	NNC	ENSG00000070614.15	novel	777	2	NA	NA	-11	-11302	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	26.8638542779451	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCATGTTCCCTTCAGT	1	True	NA	NA	False	AATACA	-16	NA	150485806	150539597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150486024_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_151725.nnic	chr5	+	2622	7	NNC	ENSG00000070614.15	novel	777	2	NA	NA	-50	-11130	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	26.8638542779451	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGGGCTGAGTA	-12	True	NA	17	True	AATAAA	-21	NA	150485767	150539769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150486024_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_151726.nic	chr5	+	2603	7	NIC	ENSG00000070614.15	novel	777	2	NA	NA	-223	-11302	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	36.9128101823142	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCATGTTCCCTTCAGT	181	False	NA	NA	False	AATACA	-16	NA	150485594	150539597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150486004_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_151727.nic	chr5	+	2589	7	NIC	ENSG00000070614.15	novel	777	2	NA	NA	-37	-11130	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	36.9128101823142	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGGGCTGAGTA	1	True	NA	17	True	AATAAA	-21	NA	150485780	150539769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150486004_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_151729.nic	chr5	+	2644	7	NIC	ENSG00000070614.15	novel	437	2	NA	NA	-164	-11130	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	44.5661181716435	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGGGCTGAGTA	168	False	NA	17	True	AATAAA	-21	NA	150486129	150539769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150486408_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_15173.known	chr1	+	1068	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_4	79.9874990232849	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	6	True	NA	33	True	AATAAA	-21	NA	156213006	156240042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_151734.known	chr5	+	4571	2	FSM	ENSG00000171992.13	ENST00000519664.1	4571	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTCTTGCTTCTTTCTTT	17	False	NA	13	True	AATACA	-13	NA	150640677	150652337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150640855_150647943
transcript_151735.known	chr5	+	3427	7	FSM	ENSG00000164591.14	ENST00000517768.6	3427	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	28.5987567717355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATGTGAAGTGTCTGC	-2	True	NA	NA	False	AATAAA	-21	NA	150661250	150679368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150661428_150662940_150663003_150670483_150670639_150671596_150671651_150671754_150671909_150672339_150672503_150676706
transcript_151737.known	chr5	+	3445	7	FSM	ENSG00000164591.14	ENST00000297130.4	3445	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	28.2174099134244	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTAAAATGTGAAGTGTC	25	False	NA	NA	False	AATAAA	-18	NA	150660881	150679365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150661080_150662940_150663003_150670483_150670639_150671596_150671651_150671754_150671909_150672339_150672503_150676706
transcript_15174.known	chr1	+	1019	5	FSM	ENSG00000160783.19	ENST00000368279.7	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	524.46615715411	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGAGCATGCTTCCT	-8	True	NA	31	True	AATAAA	-19	NA	156212992	156240040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156239547
transcript_151743.nic	chr5	+	3230	5	ISM	ENSG00000164591.14	ENST00000517768.6	3427	7	9188	3	-982	0	3prime_fragment	FALSE	canonical	3	15	junction_1	22.1020361053003	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTAAAATGTGAAGTGTC	9113	False	NA	NA	False	AATAAA	-18	NA	150670438	150679365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150670639_150671596_150671651_150671754_150671909_150672339_150672503_150676706
transcript_151748.nic	chr5	+	3376	4	ISM	ENSG00000164591.14	ENST00000517768.6	3427	7	10000	3	-170	0	3prime_fragment	FALSE	canonical	3	52	junction_3	10.3387082795139	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTAAAATGTGAAGTGTC	636	False	NA	NA	False	AATAAA	-18	NA	150671250	150679365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150671651_150671754_150671909_150672339_150672503_150676706
transcript_15175.known	chr1	+	655	5	FSM	ENSG00000260238.6	ENST00000567140.3	655	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	31.2289929392544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTCCTCTTCCCC	8	True	NA	-88	True	NA	NA	NA	156213008	156243214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_151752.known	chr5	+	3290	2	FSM	ENSG00000164591.14	ENST00000456566.2	3290	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAAATGTGAAGTG	567	False	NA	NA	False	AATAAA	-16	NA	150672651	150679363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150673285_150676706
transcript_151754.known	chr5	-	425	2	FSM	ENSG00000250309.2	ENST00000511626.2	425	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTGGCTTACTCACC	NA	False	NA	NA	False	NA	NA	NA	150672390	150670657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150670808_150672115
transcript_151756.known	chr5	-	2299	11	FSM	ENSG00000086589.12	ENST00000199814.9	2299	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	33.3772377526961	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTCATGGGTTTATT	-21	True	NA	-9	True	ATTAAA	-17	NA	150701062	150690791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_15176.known	chr1	+	884	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	602.015988159783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	5	True	NA	NA	False	NA	NA	NA	156213005	156239851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
transcript_151762.known	chr5	-	4116	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_10	20.9775011752009	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCACTCATCACCT	-9	True	NA	NA	False	AATATA	-19	NA	150759017	150708439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
transcript_151764.known	chr5	-	4054	13	FSM	ENSG00000132912.13	ENST00000424236.5	4054	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	45.3917362767963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTCTTTTGTTTGCTC	-10	True	NA	-8	True	AATAAA	-15	NA	150758520	150708747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758115
transcript_151765.known	chr5	+	1521	2	FSM	ENSG00000256235.3	ENST00000526627.2	1521	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGAGGTCTTTCTTT	2	True	NA	23	True	AATAAA	-14	NA	150778756	150796734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150778973_150795429
transcript_151766.nnic	chr5	-	3153	6	NIC	ENSG00000145908.13	novel	3256	6	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.8742999947733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-2	True	NA	-21	True	CATAAA	-21	NA	150904871	150894398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_150896974_150898057_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_151768.known	chr5	-	3226	5	FSM	ENSG00000145908.13	ENST00000418587.6	3226	5	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_1	58.5619330282053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-5	True	NA	-14	True	CATAAA	-28	NA	150904983	150894391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903863_150903978_150904703
transcript_151769.known	chr5	-	4155	5	FSM	ENSG00000145908.13	ENST00000427179.5	4155	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	20.8626460450251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	189	False	NA	-21	True	CATAAA	-21	NA	150904789	150894398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_151774.known	chr5	+	1478	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	237.583332748743	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGCCTACTGTGTGTG	-2	True	NA	15	True	AGTAAA	-15	NA	151020588	151028987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908_151028777_151028902
transcript_151779.known	chr5	+	1603	5	FSM	ENSG00000211445.13	ENST00000388825.9	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_4	58.7468084239476	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCCTACTGTGTGTGG	0	True	NA	16	True	AGTAAA	-16	NA	151020590	151028988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908
transcript_151780.known	chr5	+	612	4	FSM	ENSG00000211445.13	ENST00000517973.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	242.162938718725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACTTTGTTCAGGAAG	15	False	NA	NA	False	NA	NA	NA	151020605	151028166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151020742_151026899_151027018_151027431_151027532_151027908
transcript_151785.known	chr5	-	2935	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	31.987346114029	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGACTCATGTTCA	6594	False	NA	-10	True	CATAAA	-19	NA	151081084	151029946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_151788.known	chr5	-	2200	18	FSM	ENSG00000145901.16	ENST00000518977.5	2200	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	34.1075035631158	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACACCAGTCCCTGAA	-46	True	NA	NA	False	NA	NA	NA	151081074	151030580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030674_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_151789.known	chr5	-	2680	17	FSM	ENSG00000145901.16	ENST00000520931.5	2680	17	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_16	34.1745862264637	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	12	True	NA	-8	True	CATAAA	-21	NA	151081016	151029944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151080879
transcript_151791.known	chr5	-	2682	17	FSM	ENSG00000145901.16	ENST00000610535.5	2682	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	35.9146122768992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGAAGAAGATCAACATT	-26	True	NA	-24	True	CATAAA	-5	NA	151081054	151029960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030748_151032286_151032384_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_151804.known	chr5	-	2785	18	FSM	ENSG00000145901.16	ENST00000315050.11	2785	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	36.2799571956424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATTCTGACTCATGTT	-5	True	NA	-12	True	CATAAA	-17	NA	151087158	151029948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151087084
transcript_151808.known	chr5	-	2889	26	FSM	ENSG00000197043.14	ENST00000354546.10	2889	26	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	36.5208105057924	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTGAGGGCCTCTGT	-12	True	NA	NA	False	AATAAA	-27	NA	151157779	151100705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
transcript_151825.known	chr5	-	899	2	FSM	ENSG00000197043.14	ENST00000519610.1	899	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGCTCCAGCATCTATA	6	True	NA	NA	False	ACTAAA	-29	NA	151157761	151154884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151155702_151157679
transcript_151826.known	chr5	-	3398	9	FSM	ENSG00000198624.13	ENST00000355417.7	3398	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.20512764713233	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGACTTTTGTGTTT	-8	True	NA	-8	True	AAAAAG	-17	NA	151224092	151181051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151183615_151184343_151184442_151185421_151185542_151186022_151186125_151187385_151187460_151198996_151199085_151201581_151201689_151205399_151205476_151223922
transcript_151834.nnic	chr5	+	1961	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-44	-1202	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	68.2179411885173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	9	True	NA	21	True	AATAAA	-15	NA	151253140	151269238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268182_151268665
transcript_151835.known	chr5	+	3603	4	FSM	ENSG00000196743.9	ENST00000357164.4	3603	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	9.7410927974683	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAGTGTTCTTACTATA	0	True	NA	45	True	AATAGA	-5	NA	151253184	151270440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295
transcript_151839.known	chr5	+	5772	11	FSM	ENSG00000123643.13	ENST00000243389.8	5772	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	3.96106046406767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGCTATCTGTGTCTT	-6	True	NA	30	True	AATAAA	-23	NA	151447602	151492379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706_151467926_151473672_151473772_151476589_151476757_151479319_151479490_151487982
transcript_151844.nic	chr5	+	1294	7	ISM	ENSG00000123643.13	ENST00000521925.5	1621	10	-37	11492	-13	-2692	5prime_fragment	FALSE	canonical	3	28	junction_3	4.88762609953839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-19	True	NA	NA	False	NA	NA	NA	151447589	151468267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706
transcript_151845.known	chr5	-	3451	10	FSM	ENSG00000113140.11	ENST00000231061.9	3451	10	0	0	0	0	multi-exon	FALSE	canonical	3	1406	junction_3	66.8072591605374	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGACCGGGTGCTCC	0	True	NA	NA	False	AATAAA	-22	NA	151686915	151661095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151663600_151664086_151664236_151666360_151666510_151667466_151667601_151669663_151669785_151671572_151671695_151673128_151673217_151674611_151674675_151676131_151676202_151686864
transcript_151867.known	chr5	+	10011	13	FSM	ENSG00000145907.16	ENST00000678925.1	10011	13	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_12	852.983326657418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	NA	False	NA	NA	False	AATAAA	-28	NA	151771905	151812785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884_151804142_151804405
transcript_151871.known	chr5	+	1794	13	FSM	ENSG00000145907.16	ENST00000678101.1	1794	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1117.30572509646	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGACTGGATTTTTT	0	True	NA	NA	False	AAAAAG	-25	NA	151771953	151804371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151772656_151772669_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_151873.known	chr5	+	10622	12	FSM	ENSG00000145907.16	ENST00000678964.1	10622	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	895.584725193546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	NA	False	NA	NA	False	AATAAA	-28	NA	151771905	151812785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803537
transcript_151874.known	chr5	+	10227	12	FSM	ENSG00000145907.16	ENST00000356245.8	10227	12	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	290.566957902638	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	0	True	NA	NA	False	AATAAA	-28	NA	151771953	151812785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_151878.known	chr5	+	1768	12	FSM	ENSG00000145907.16	ENST00000676827.1	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	846.868602412479	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTCCTTGCTTAC	14	False	NA	NA	False	TTTAAA	-15	NA	151771938	151804346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772033_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_151881.known	chr5	+	10540	12	FSM	ENSG00000145907.16	ENST00000677323.1	10540	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	854.957076879176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	169	False	NA	NA	False	AATAAA	-28	NA	151772272	151812785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772669_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_151892.known	chr5	-	471	4	FSM	ENSG00000177556.12	ENST00000313115.11	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_3	80.7589004382799	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	7738	False	151758644	-9	True	AATAAA	-21	NA	151758631	151742821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151758545
transcript_151895.known	chr5	+	1207	3	FSM	ENSG00000145907.16	ENST00000676894.1	1207	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCTCTGACAATGGAA	21	False	NA	NA	False	AATAAA	-17	NA	151771974	151787868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151786867
transcript_151897.known	chr5	-	726	2	FSM	ENSG00000275765.6	ENST00000623943.2	1185	2	0	459	0	-459	multi-exon	FALSE	canonical	3	21	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACATTTACAGATTAGT	605	False	NA	NA	False	NA	NA	NA	151771508	151770241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151770773_151771313
transcript_151898.known	chr5	+	2654	11	FSM	ENSG00000145907.16	ENST00000520177.6	2654	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	1203.48339830677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTATTAAAATATTTC	-7	True	NA	-13	True	NA	NA	NA	151771946	151805319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772033_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151803884
transcript_151899.known	chr5	-	2059	4	FSM	ENSG00000132911.5	ENST00000255262.4	2059	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTATGGTGATCTGTG	-1	True	NA	NA	False	AATAAA	-17	NA	152405279	152391545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_152392502_152395458_152395585_152398059_152398145_152404387
transcript_151902.known	chr5	-	2121	15	FSM	ENSG00000055147.19	ENST00000520667.5	2121	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	27.3429653677512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-26	True	NA	NA	False	AATAAA	-20	NA	154038921	153992498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038387_154038435_154038856
transcript_151903.known	chr5	-	4414	14	FSM	ENSG00000055147.19	ENST00000351797.9	4414	14	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_13	10.0525247792716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGATATTTCACAAA	-15	True	NA	NA	False	AATAAA	-25	NA	154038910	153990147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
transcript_151907.known	chr5	+	5037	3	FSM	ENSG00000037749.13	ENST00000522782.6	5037	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	23	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	-13	True	NA	29	True	ATTAAA	-31	NA	154038966	154057450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154039012_154049556_154050018_154052919
transcript_151912.known	chr5	+	6185	4	FSM	ENSG00000164576.12	ENST00000297109.11	6185	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	36.4508801905615	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCCCTTTGAA	-9	True	NA	18	True	AATAAA	-21	NA	154445996	154461053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154446806_154451090_154451214_154453401_154453501_154455899
transcript_151921.nnic	chr5	+	4088	19	NIC	ENSG00000155506.19	novel	6231	19	NA	NA	-362	995	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	108.037830594224	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	NA	False	NA	133	True	CATAAA	-22	NA	154682623	154814915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154683038_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_151924.known	chr5	+	6652	19	FSM	ENSG00000155506.19	ENST00000336314.9	6652	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	112.646447889946	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	0	True	NA	33	True	AATAAA	-18	NA	154712842	154817605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154713131_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_151926.nnic	chr5	+	4457	19	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	-65	995	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	106.625585260287	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	-27	True	NA	133	True	CATAAA	-22	NA	154755311	154814915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154793902_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_151929.known	chr5	+	7181	19	FSM	ENSG00000155506.19	ENST00000518297.6	7181	19	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_6	73.4361442611921	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	38	True	NA	33	True	AATAAA	-18	NA	154755376	154817605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_151935.nic	chr5	+	4739	18	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	-149	995	intron_retention	FALSE	canonical	3	311	junction_1	65.6011857433557	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	NA	False	NA	133	True	CATAAA	-22	NA	154755227	154814915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_151944.known	chr5	-	2947	9	FSM	ENSG00000170271.11	ENST00000326080.10	2947	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	2.72717802865893	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	7	True	NA	-1	True	AATAAA	-15	NA	154850603	154818491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_154820473_154821259_154821427_154822471_154822578_154823386_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
transcript_151945.known	chr5	+	2708	8	FSM	ENSG00000155508.14	ENST00000517876.5	2708	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	173.473517357808	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	17	False	NA	14	True	AATAAA	-23	NA	154858251	154876792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858526_154858638_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_151947.nic	chr5	+	2814	8	NIC	ENSG00000155508.14	novel	2708	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	210.010495364554	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	NA	False	NA	14	True	AATAAA	-23	NA	154858193	154876792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154858526_154858638_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_151953.known	chr5	+	2446	7	FSM	ENSG00000155508.14	ENST00000285896.11	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	40.8224475285623	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	-22	True	NA	14	True	AATAAA	-23	NA	154858626	154876792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_151954.known	chr5	+	1151	7	FSM	ENSG00000155508.14	ENST00000521583.5	1151	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	249.950439531964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAAAGATGTTTTTATT	-22	True	NA	NA	False	NA	NA	NA	154858626	154875585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858769_154865191_154865386_154867691_154867793_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_151955.known	chr5	+	945	6	FSM	ENSG00000155508.14	ENST00000519404.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	180.688239794404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTACTGTGCTGACTGT	3	True	NA	NA	False	NA	NA	NA	154858651	154875478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154871729_154871875_154872540_154872652_154875289
transcript_151956.known	chr5	+	923	6	FSM	ENSG00000155508.14	ENST00000520671.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	191.341161280055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCCTGATCCCAGAGTG	-22	True	NA	NA	False	NA	NA	NA	154858626	154875458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858769_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_151957.known	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	158.436895955456	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	5	True	NA	14	True	AATAAA	-23	NA	154858516	154876792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_151958.known	chr5	-	5404	28	FSM	ENSG00000082516.9	ENST00000285873.8	5404	28	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_17	27.2842578609593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTCCTAATTTTGCA	-8	True	NA	-13	True	ATTAAA	-26	NA	154938211	154887410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_154888378_154889320_154889418_154891240_154891743_154892386_154892550_154896091_154896344_154898439_154898651_154899190_154899311_154901338_154901487_154902538_154902677_154903079_154903176_154904506_154904630_154905362_154905477_154907590_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_151960.nic	chr5	-	2338	16	ISM	ENSG00000082516.9	ENST00000285873.8	5404	28	-23	20338	-23	-16315	5prime_fragment	FALSE	canonical	3	154	junction_5	24.5541578284955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACCTTGAGAACTCCTG	NA	False	NA	NA	False	AAAAAG	-9	NA	154938234	154907748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_151963.known	chr5	+	784	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_1	119.290234302729	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	6	True	NA	9	True	AATAAA	-13	NA	154941094	154966966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_151964.known	chr5	-	1382	2	FSM	ENSG00000155868.8	ENST00000420343.1	1382	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGCAAAGTTTTCGT	85	False	NA	-25	True	AGTAAA	-18	NA	157142775	157138441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157139449_157142400
transcript_151965.known	chr5	-	2071	2	FSM	ENSG00000155868.8	ENST00000286317.6	2071	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGAGGGTTCTCTGGCT	-5	True	NA	NA	False	AATAAA	-39	NA	157142865	157137423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157139449_157142819
transcript_151970.known	chr5	+	4210	32	FSM	ENSG00000055163.20	ENST00000616178.4	4210	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	58.2945086595154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTGCTTTTTCTTT	NA	False	NA	NA	False	AGTAAA	-5	NA	157266078	157393233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157322941_157323017_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_151976.known	chr5	+	6452	31	FSM	ENSG00000055163.20	ENST00000620254.5	6452	31	0	0	0	0	multi-exon	FALSE	canonical	2	152	junction_18	28.4222330813983	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGGTCTTGATTCCT	11	True	NA	NA	False	ATTAAA	-25	NA	157266122	157395594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_151978.nic	chr5	+	4519	31	NIC	ENSG00000055163.20	novel	6452	31	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	2	59	junction_1	40.0339300538375	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACAGGGCAGTGTGTG	NA	False	NA	NA	False	CATAAA	-19	NA	157266073	157393223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_157266585_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_151983.known	chr5	+	6370	30	FSM	ENSG00000055163.20	ENST00000521420.5	6370	30	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	49.281399751574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGGTCTTGATTCCTG	16	True	NA	NA	False	ATTAAA	-26	NA	157266127	157395595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_151987.known	chr5	+	3673	28	FSM	ENSG00000055163.20	ENST00000435847.6	3673	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	51.5539857147117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACAGGGCAGTGTGTG	11	True	NA	NA	False	CATAAA	-19	NA	157266122	157393223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_151992.known	chr5	+	1294	8	FSM	ENSG00000055163.20	ENST00000622696.4	1294	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	27.4174084427082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGGGAAGCAGGTGG	24	True	NA	NA	False	AATAAA	-21	NA	157266135	157304782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237
transcript_151998.known	chr5	+	4256	31	FSM	ENSG00000055163.20	ENST00000618329.4	4256	31	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	46.9380797789314	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCAGTGTGTGCTTTTT	13	False	NA	NA	False	AGTAAA	-1	NA	157269341	157393229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157269584_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_152000.known	chr5	-	6481	23	FSM	ENSG00000135074.16	ENST00000257527.9	6481	23	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_15	9.36010524769534	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTGGCAGCTCTTTA	-1	True	NA	-5	True	ATTAAA	-29	NA	157575775	157477303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157481003_157481790_157481944_157488264_157488490_157489101_157489187_157490309_157490455_157491614_157491724_157491834_157491913_157492972_157493178_157494686_157494796_157496893_157497090_157499572_157499663_157502802_157502981_157505668_157505809_157507055_157507141_157509300_157509468_157513433_157513506_157518822_157518889_157519838_157520032_157530806_157530884_157537912_157537992_157564372_157564444_157570894_157570981_157575602
transcript_152003.known	chr5	+	2885	6	FSM	ENSG00000113272.14	ENST00000231198.12	2885	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	13.8650640099496	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTTTTCATTTATTT	-3	True	NA	5	True	AATAAA	-17	NA	157731419	157741449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157731632_157732867_157733045_157734575_157734746_157735845_157735935_157737886_157737995_157739320
transcript_152005.known	chr5	+	919	6	FSM	ENSG00000113272.14	ENST00000521655.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	42.9725493774805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGTGCGAATGACA	-3	True	NA	NA	False	NA	NA	NA	157731419	157739578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157731632_157732867_157733045_157734670_157734746_157735845_157735935_157737886_157737995_157739320
transcript_152012.known	chr5	-	3952	12	FSM	ENSG00000113282.14	ENST00000411809.7	3952	12	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	163.76484854765	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTTAATTCTTT	-7	True	NA	NA	False	AGTAAA	-13	NA	157859145	157785746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789514_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_152013.known	chr5	-	2346	12	FSM	ENSG00000113282.14	ENST00000523908.5	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	131.640193314458	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGACCATTGAAAGC	-5	True	NA	NA	False	NA	NA	NA	157859143	157787404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_152014.known	chr5	-	3987	12	FSM	ENSG00000113282.14	ENST00000523094.5	3987	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	262.402913962857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTAATTCTTTCTCT	-7	True	NA	NA	False	AGTAAA	-17	NA	157859145	157785742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858952
transcript_152015.known	chr5	-	3344	12	FSM	ENSG00000113282.14	ENST00000530742.5	3344	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	262.65629742786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTGCTTTTTCTTT	5	True	NA	-12	True	ATTAAA	-18	NA	157859133	157786286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157859039
transcript_152033.nic	chr5	-	678	5	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-52	25722	-50	-21369	5prime_fragment	FALSE	canonical	3	866	junction_3	45.4113146693641	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAGAAGAACAAAGACAA	NA	False	NA	NA	False	AAGAAA	-1	NA	157859195	157813126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_152034.known	chr5	-	3615	11	FSM	ENSG00000145860.12	ENST00000424310.7	3615	11	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_4	24.503877244224	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTCTTGTGGT	-7	True	NA	-2	True	AATAAA	-18	NA	159209553	159157408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159209230
transcript_152037.known	chr5	+	2179	11	FSM	ENSG00000164332.8	ENST00000296786.8	2179	11	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_10	23.0228147714392	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTATCTGTTCTATA	-15	True	NA	16	True	AATAAA	-16	NA	159263289	159286036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_159263361_159268869_159269070_159269907_159270000_159270359_159270446_159270527_159270644_159272022_159272122_159274584_159274623_159275147_159275247_159278237_159278355_159283211_159283340_159284903
transcript_152040.known	chr5	+	1441	8	FSM	ENSG00000113312.12	ENST00000231238.10	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	64.7598389026245	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGTTAGGTTGTGAA	-7	True	NA	16	True	AATAAA	-16	NA	160009138	160065543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_152041.known	chr5	+	2208	7	FSM	ENSG00000113312.12	ENST00000682151.1	2208	7	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	68.0343050722697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	NA	False	NA	NA	NA	160009124	160052548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128
transcript_152045.known	chr5	-	3991	4	FSM	ENSG00000170234.13	ENST00000456329.7	3991	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	103.124520200904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTTATTTAAAAATTAT	3	True	NA	-11	True	AATAAA	-20	NA	160119423	160075881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160078169_160080650_160080771_160093100_160094066_160118804
transcript_152050.known	chr5	-	1819	3	FSM	ENSG00000170234.13	ENST00000523662.1	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	126.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAGATGAGGAGAAAAAT	4	True	NA	-14	True	AATAAA	-17	NA	160119422	160077932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160078169_160093100_160094066_160118804
transcript_152053.known	chr5	-	407	3	FSM	ENSG00000170234.13	ENST00000520662.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGAAAAATGTACAGGGAA	593	False	NA	NA	False	NA	NA	NA	160118833	160093757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160094066_160108544_160108615_160118804
transcript_152054.known	chr5	+	1432	8	FSM	ENSG00000113312.12	ENST00000522793.5	1432	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	236.304542348838	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	NA	False	NA	-16	True	NA	NA	NA	160009112	160065511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009191_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_152055.known	chr5	-	3373	2	FSM	ENSG00000170234.13	ENST00000307063.9	3373	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	-24	True	NA	-19	True	AATAAA	-17	NA	160119450	160091338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160094066_160118804
transcript_152059.known	chr5	+	1366	7	FSM	ENSG00000113312.12	ENST00000684137.1	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	271.377146339841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	-19	True	NA	-16	True	NA	NA	NA	160009126	160065511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160064931
transcript_152061.nic	chr5	-	3404	7	NIC	ENSG00000135083.17	novel	3560	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	85.941194365036	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTCCTAGGCATCC	146	False	NA	-3	True	AATAAA	-25	NA	160312622	160251652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_160253799_160254128_160254336_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
transcript_152064.known	chr5	-	3320	7	FSM	ENSG00000135083.17	ENST00000393977.7	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	96.1486118233412	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTCCTAGGCATCCC	168	False	NA	-2	True	AATAAA	-26	NA	160312600	160251651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160276268_160276413_160280524_160280739_160311857_160311973_160312363
transcript_152076.known	chr5	-	5709	6	FSM	ENSG00000135083.17	ENST00000257536.13	5709	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	29.0337734371542	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGATCTTTTATTTCTT	-10	True	NA	NA	False	ATTAAA	-16	NA	160312564	160249082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
transcript_152082.nnic	chr5	-	2972	5	NIC	ENSG00000135083.17	novel	3320	7	NA	NA	-22	3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	88.7901317714981	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATCTCTCACCTCTTGT	146	False	NA	-14	True	AATAAA	-14	NA	160312622	160251663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_160253799_160255548_160255709_160259468_160259772_160311857_160311973_160312363
transcript_152094.known	chr5	-	2385	3	FSM	ENSG00000145861.9	ENST00000393975.4	2385	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	160370641	160347779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160349782_160354767_160355021_160370511
transcript_152096.known	chr5	-	2808	2	FSM	ENSG00000221886.4	ENST00000408953.4	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTGTCATCTTTAA	-10	True	NA	-2	True	AATAAA	-17	NA	160400054	160393147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160395540_160399638
transcript_152099.known	chr5	-	3480	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_8	28.1334913107729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGTAGCATTATTTC	-8	True	NA	-1	True	CATAAA	-20	NA	160419081	160401640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_152103.nic	chr5	-	2016	15	NIC	ENSG00000164609.10	novel	3480	16	NA	NA	0	-1354	intron_retention	FALSE	canonical	2	8	junction_14	72.3152466493698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCATCGAAAGAGCA	-8	True	NA	NA	False	AAAAAG	-6	NA	160419081	160404506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160418595
transcript_152104.nic	chr5	-	1627	15	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-38	2866	-38	-1354	5prime_fragment	FALSE	canonical	3	215	junction_7	28.7740139283872	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCATCGAAAGAGCA	-1	True	NA	NA	False	AAAAAG	-6	NA	160419119	160404506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_152108.nic	chr5	-	1577	14	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-38	3168	-38	1540	5prime_fragment	FALSE	canonical	3	215	junction_6	28.1462789325957	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGATAATCATTTGT	-1	True	NA	NA	False	NA	NA	NA	160419119	160404808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_152113.known	chr5	+	715	6	FSM	ENSG00000164611.13	ENST00000352433.10	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	2239	junction_1	496.637332467063	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	-5	True	NA	28	True	AATAAA	-16	NA	160421854	160428739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_152114.known	chr5	+	895	6	FSM	ENSG00000164611.13	ENST00000520452.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	1304.92690983059	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	25	False	NA	-7	True	TTTAAA	-23	NA	160421903	160428704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160422156_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_152115.known	chr5	+	434	3	FSM	ENSG00000164611.13	ENST00000524244.5	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	2239	junction_1	627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTTAGCAAGCAGAGTA	-5	True	NA	NA	False	NA	NA	NA	160421854	160423003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160421892_160422301_160422404_160422708
transcript_152117.known	chr5	+	1070	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	2777	junction_4	312.198154222603	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	31	False	NA	28	True	AATAAA	-16	NA	160421909	160428739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_152118.known	chr5	+	4238	10	FSM	ENSG00000022355.18	ENST00000393943.10	4238	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	9.6083811151682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATGTTTTGAAAGGAC	-3	True	NA	25	True	AATAAA	-41	NA	161848119	161899971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_161848423_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665_161895869_161897110
transcript_152120.known	chr5	+	4087	10	FSM	ENSG00000022355.18	ENST00000437025.6	4087	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.9251098251394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATACTTGACTCTCTTT	96	False	NA	8	True	AATAAA	-24	NA	161848443	161899954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_161848613_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665_161895869_161897110
transcript_152127.known	chr5	+	2366	8	FSM	ENSG00000113328.19	ENST00000393929.5	2366	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	1435.17542126247	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTGCTGGGTGGCTT	NA	False	NA	14	True	AATAAA	-14	NA	163437570	163445014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163437665_163437764_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_152135.known	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	FALSE	canonical	3	3745	junction_3	194.332189819391	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	-5	True	NA	16	True	AATAAA	-16	NA	163437594	163445016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_152142.known	chr5	-	7967	4	FSM	ENSG00000170584.11	ENST00000302764.9	7967	4	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_3	58.0861429258304	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTGAGTCCAATTAA	10	True	NA	NA	False	ATTAAA	-15	NA	163460102	163446525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_163454051_163456928_163457081_163457561_163457611_163459861
transcript_152144.nic	chr5	-	2054	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-276	341	combination_of_known_junctions	FALSE	canonical	3	126	junction_3	527.977482684842	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATTGTGTACCCCTTT	NA	False	NA	-12	True	AATAAA	-11	NA	163460378	163453581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163458994
transcript_152145.nic	chr5	-	1677	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-231	341	combination_of_known_junctions	FALSE	canonical	3	96	junction_3	542.113354280162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATTGTGTACCCCTTT	NA	False	NA	-12	True	AATAAA	-11	NA	163460333	163453581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163459326
transcript_152148.known	chr5	+	2988	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	106.557488098661	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	7	True	NA	13	True	AATAAA	-26	NA	163460656	163491941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_152149.known	chr5	+	2872	17	FSM	ENSG00000072571.20	ENST00000353866.7	2872	17	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_3	69.4883083691062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGATAATGCTCACTT	NA	False	NA	NA	False	AAAACA	-27	NA	163460365	163491579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_152159.nic	chr5	+	823	8	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	-37	18688	-37	1790	5prime_fragment	FALSE	canonical	3	226	junction_3	94.9403679653063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATGAGCAGTAGCTTT	NA	False	NA	NA	False	AATACA	-14	NA	163460594	163473253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178
transcript_152161.nic	chr5	+	748	7	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	-37	20478	-37	0	5prime_fragment	FALSE	canonical	3	226	junction_3	102.345818999443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGTGAATGTGAAG	NA	False	NA	NA	False	NA	NA	NA	163460594	163471463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362
transcript_152166.known	chr5	+	2226	7	FSM	ENSG00000038274.17	ENST00000280969.9	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	116.405421790491	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACTTACCACCCCATC	0	True	NA	19	True	AATAAA	-30	NA	163503113	163519336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163503425_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_15217.known	chr1	-	4559	22	FSM	ENSG00000198952.8	ENST00000361813.5	4559	22	0	0	0	0	multi-exon	TRUE	canonical	3	414	junction_17	45.4447909549963	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	-3	True	NA	-15	True	AATAAA	-15	NA	156282825	156249223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156266540_156266679_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_152170.known	chr5	+	2064	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	110.554159678513	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	8	True	NA	37	True	AATAAA	-38	NA	163505618	163519354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_152176.known	chr5	+	3210	6	FSM	ENSG00000038274.17	ENST00000523606.1	3210	6	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	118.833328658251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTAGTTTTCTTGTAT	15	True	NA	16	True	AATAAA	-19	NA	163505625	163519149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163505750_163512001_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_152177.known	chr5	+	3409	5	FSM	ENSG00000038274.17	ENST00000518095.5	3409	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	124.880943302011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGAATGTTAACTTAC	3	True	NA	10	True	AATAAA	-21	NA	163505613	163519327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517
transcript_152180.known	chr5	+	557	4	FSM	ENSG00000038274.17	ENST00000520449.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	281.240506012598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAGCAAACATGGATCA	28	True	NA	NA	False	GATAAA	-16	NA	163505638	163516615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163505750_163512001_163512197_163513841_163513995_163516517
transcript_152183.nnic	chr5	-	1083	5	Fusion	ENSG00000254297.1_ENSG00000254365.1	novel	523	2	NA	NA	0	7	multi-exon	FALSE	canonical	3	66	junction_2	21.6491916708223	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303372	167287312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
transcript_152187.nnic	chr5	-	1370	3	Fusion	ENSG00000254297.1_ENSG00000254365.1	novel	523	2	NA	NA	0	2865	multi-exon	FALSE	canonical	3	85	junction_1	20	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGGACATGGTGACGC	NA	False	NA	NA	False	AATACA	-22	NA	167303372	167293368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr5_-_167294401_167297462_167297551_167303122
transcript_152188.known	chr5	-	648	3	FSM	ENSG00000254297.1	ENST00000523497.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	42	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGGGTGAACACAAAGA	NA	False	NA	NA	False	NA	NA	NA	167303372	167296233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_167296544_167297462_167297551_167303122
transcript_152192.known	chr5	-	590	3	FSM	ENSG00000253978.2	ENST00000655017.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGACTTCCTAGTGCTT	NA	False	NA	-6	True	GATAAA	-21	NA	168269415	168229583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_168229861_168230885_168231057_168269273
transcript_152193.known	chr5	+	3562	23	FSM	ENSG00000113645.15	ENST00000521089.5	3562	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_20	17.5301982658403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACAGAAACAAAAAA	20	False	NA	-35	True	ATTAAA	-30	NA	168292149	168469216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467839_168467965_168468950
transcript_152194.known	chr5	+	7136	23	FSM	ENSG00000113645.15	ENST00000265293.9	7136	23	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_20	17.4021467280276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTTTCCA	-26	True	NA	7	True	AATAAA	-18	NA	168291644	168472303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464728_168464963_168467839_168467965_168468950
transcript_152197.known	chr5	+	2122	15	FSM	ENSG00000113643.9	ENST00000231572.8	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_3	76.4230972672422	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTGGTTCTTTAACA	0	True	NA	19	True	AGTAAA	-19	NA	168486470	168519301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_152201.nic	chr5	+	1518	12	ISM	ENSG00000113643.9	ENST00000231572.8	2122	15	-46	8623	-26	4648	5prime_fragment	FALSE	canonical	3	756	junction_3	76.2532752311078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAAGGTAATTCAAAGC	NA	False	NA	20	True	AAAAAG	-4	NA	168486424	168510678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580
transcript_152203.known	chr5	+	757	3	FSM	ENSG00000113643.9	ENST00000524082.5	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_2	47	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCAATTAAATATTTGAT	NA	False	NA	NA	False	ATTAAA	-22	NA	168486450	168493187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168486544_168488601_168488737_168492658
transcript_152204.known	chr5	-	10274	7	FSM	ENSG00000120137.7	ENST00000239231.7	10274	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	18.2847842025366	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTTTTTATTATTT	-11	True	NA	-3	True	AATAAA	-20	NA	168579368	168548494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
transcript_152213.known	chr5	+	645	1	FSM	ENSG00000233913.7	ENST00000522551.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	39	False	NA	NA	False	NA	NA	NA	168616351	168616996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168616400_168617000
transcript_152214.nic	chr5	+	2726	13	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	142.683702253933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	-14	True	NA	26	True	AATAAA	-23	NA	169583749	169604778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_169583890_169587198_169587373_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_152218.known	chr5	+	2529	12	FSM	ENSG00000040275.17	ENST00000265295.9	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_11	38.4290695753846	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	9	True	NA	26	True	AATAAA	-23	NA	169583772	169604778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_152225.known	chr5	+	711	4	FSM	ENSG00000040275.17	ENST00000506574.5	711	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	179.841288053908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCACCTGGAGAAAT	NA	False	NA	-70	True	ATTAAA	-9	NA	169583635	169591148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_169583890_169587198_169587373_169588393_169588576_169591047
transcript_152226.nic	chr5	+	524	3	ISM	ENSG00000040275.17	ENST00000510751.5	1617	8	-36	4959	-18	66	5prime_fragment	FALSE	canonical	3	405	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTTGGGATATCTGCG	NA	False	NA	1	True	ACTAAA	-3	NA	169583719	169591219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_169583890_169588393_169588576_169591047
transcript_152227.known	chr5	+	6069	52	FSM	ENSG00000134516.19	ENST00000520908.7	6069	52	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_21	2.88575229717415	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTGCCTGATTCTGT	4	True	NA	NA	False	AATAAA	-24	NA	169637274	170083382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_169637370_169654402_169654487_169669287_169669329_169670541_169670598_169671077_169671175_169674296_169674446_169681743_169681880_169684195_169684351_169689251_169689334_169695802_169695939_169698373_169698450_169699381_169699459_169700013_169700140_169702302_169702428_169708168_169708268_169711934_169712008_169712119_169712224_169714027_169714212_169714359_169714458_169716212_169716303_169717383_169717485_169718656_169718792_169747395_169747505_169759704_169759776_169761518_169761626_169803057_169803207_169840756_169840853_169983067_169983167_169985827_169985923_169996085_169996165_170008496_170008598_170008687_170008747_170018959_170019109_170027862_170027949_170034398_170034556_170036514_170036556_170041054_170041146_170042012_170042133_170045815_170045906_170047509_170047615_170050255_170050398_170055304_170055387_170056683_170056769_170057579_170057667_170067509_170067687_170069136_170069221_170075946_170076085_170077709_170077838_170078974_170079147_170080162_170080284_170081841_170081985_170082795
transcript_152228.nnic	chr5	+	1982	7	NNC	ENSG00000182132.14	novel	1845	9	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.69967317119759	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAATCACTTCTTCATG	-17	True	NA	NA	False	AATAAA	-18	NA	170504016	170736625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_170504634_170588782_170588934_170721832_170721904_170722712_170722821_170732799_170732905_170733835_170733899_170735758
transcript_152231.known	chr5	+	3304	10	FSM	ENSG00000094755.17	ENST00000265294.9	3304	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	2.0427529234278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	1	True	NA	7	True	AATAAA	-26	NA	170783724	170814047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170811955
transcript_152235.known	chr5	+	1567	9	FSM	ENSG00000094755.17	ENST00000519385.5	1567	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCCCATGGAGCCCAAG	1	True	NA	NA	False	AATAGA	-36	NA	170783724	170812498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170811955
transcript_152243.nnic	chr5	-	1896	4	NNC	ENSG00000253348.1	novel	345	2	NA	NA	-1	2178	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	5.71547606649408	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTCCCCTTGTTCACAA	-1	True	NA	-10	True	AATAAA	-28	NA	170767559	170744868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170767307
transcript_152247.nnic	chr5	-	1390	4	NNC	ENSG00000253348.1	novel	345	2	NA	NA	-1	1672	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	5.71547606649408	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTAGTTTCTTGGTC	-1	True	NA	-3	True	AATAGA	-15	NA	170767559	170745374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170767307
transcript_152249.known	chr5	+	1284	10	FSM	ENSG00000094755.17	ENST00000519598.1	1284	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.55796987404919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTTTTATATTAATAT	23	False	NA	NA	False	AAAACA	-13	NA	170783746	170810076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170809982
transcript_152254.known	chr5	+	1199	7	FSM	ENSG00000204764.14	ENST00000443155.5	1199	7	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_5	7.14142842854285	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACTTTCAGACTTTCA	-15	True	NA	NA	False	NA	NA	NA	170861869	170911409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968
transcript_152259.known	chr5	+	1338	12	FSM	ENSG00000181163.14	ENST00000676589.1	1338	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7958.44958737006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCAGACATGGAAATGGT	NA	False	NA	-57	True	NA	NA	NA	171387830	171410813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171402813_171402901_171405301_171405404_171407699_171407775_171410526
transcript_152260.known	chr5	+	1913	12	FSM	ENSG00000181163.14	ENST00000678280.1	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	7685.71947841101	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTGTTGTCCAAAAT	NA	False	NA	NA	False	GATAAA	-22	NA	171387826	171410706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407162_171407699_171407775_171410526
transcript_152261.known	chr5	+	1346	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	7990.83906681492	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	-9	True	NA	17	True	AATAAA	-25	NA	171387842	171410887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
transcript_152271.known	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_9	5787.62785258347	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	NA	False	NA	-15	True	AATATA	-6	NA	171387826	171410855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_152272.known	chr5	+	1289	11	FSM	ENSG00000181163.14	ENST00000678774.1	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6283.24645386444	4867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392983_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_152278.known	chr5	+	1598	10	FSM	ENSG00000181163.14	ENST00000393820.2	1598	10	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_9	6097.9144360294	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTTGCCTGTATCCA	-1	True	NA	NA	False	NA	NA	NA	171387850	171407125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396
transcript_152279.known	chr5	+	1237	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_7	6278.76010406867	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	NA	False	NA	14	True	AATAAA	-22	NA	171387828	171410884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
transcript_152281.known	chr5	+	1936	10	FSM	ENSG00000181163.14	ENST00000676504.1	1936	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_5	1219.42955698328	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATAAAGTAGCACGG	NA	False	NA	0	True	AATAAA	-8	NA	171387830	171410870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400926_171405301_171405404_171407699_171407775_171410526
transcript_152282.known	chr5	+	1382	10	FSM	ENSG00000181163.14	ENST00000518587.2	1382	10	0	0	0	0	multi-exon	FALSE	canonical	3	19193	junction_9	932.916031048698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_152285.known	chr5	+	1263	10	FSM	ENSG00000181163.14	ENST00000521672.6	1263	10	0	0	0	0	multi-exon	FALSE	canonical	2	214	junction_1	6498.01663377676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	NA	False	NA	3	True	AATAAA	-11	NA	171387798	171410873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_152295.known	chr5	+	883	5	FSM	ENSG00000181163.14	ENST00000677297.1	883	5	0	0	0	0	multi-exon	FALSE	canonical	1	65	junction_3	8711.00973983499	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	NA	False	NA	14	True	AATAAA	-22	NA	171387756	171410884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171407699_171407775_171410526
transcript_152298.known	chr5	+	268	2	FSM	ENSG00000181163.14	ENST00000523339.1	268	2	0	0	0	0	multi-exon	FALSE	canonical	3	21168	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTCAGCCTTTTA	0	True	NA	73	True	AATAAA	-12	NA	171387851	171390163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050
transcript_152299.known	chr5	+	1338	12	FSM	ENSG00000181163.14	ENST00000517671.5	1338	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6009.66119835455	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTTTCTATTGACTT	NA	False	NA	13	True	AATAAA	-21	NA	171387115	171410883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171387235_171387932_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_152300.known	chr5	-	2099	14	FSM	ENSG00000072803.18	ENST00000523843.5	2099	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	60.8132265277058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGCTTCCCCGGCTTCA	212	False	172006670	NA	False	NA	NA	NA	172006649	171863926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171914342_171914406_171996889_171997052_172006457
transcript_152303.known	chr5	-	4539	13	FSM	ENSG00000072803.18	ENST00000296933.10	4539	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_12	44.3736502142131	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTGTTAAGAAATTTTT	-12	True	NA	-1	True	AATAAA	-18	NA	172006873	171861548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171914342_171914406_172006457
transcript_152305.known	chr5	-	4342	13	FSM	ENSG00000072803.18	ENST00000265094.9	4342	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	74.6322465307204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACGTTCTGTTAAGAAATT	-25	True	NA	-4	True	AATAAA	-15	NA	172006640	171861551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171957596_171957699_172006457
transcript_152307.known	chr5	-	2181	12	FSM	ENSG00000072803.18	ENST00000393802.6	2181	12	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_11	31.2190342447289	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGTTGTATTAGGAAC	211	False	172006670	NA	False	NA	NA	NA	172006650	171863620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_172006457
transcript_152315.nic	chr5	-	510	4	ISM	ENSG00000072803.18	ENST00000523843.5	2099	14	-21	46799	-11	8	5prime_fragment	FALSE	canonical	3	28	junction_2	34.8743777324015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTGTATTAAATATTT	0	True	NA	15	True	AAAAAG	-6	NA	172006670	171910725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_171910798_171914342_171914406_171996889_171997052_172006457
transcript_152320.nic	chr5	-	253	2	ISM	ENSG00000072803.18	ENST00000393802.6	2181	12	12	47105	0	8	5prime_fragment	FALSE	canonical	3	103	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTGTATTAAATATTT	-23	True	NA	15	True	AAAAAG	-6	NA	172006638	171910725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_171910798_172006457
transcript_152321.known	chr5	-	5892	19	FSM	ENSG00000072786.13	ENST00000176763.10	5892	19	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_9	20.899229119223	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGTTCAGGTTGTTCT	-1	True	NA	NA	False	AATAAA	-13	NA	172188224	172042078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172045023_172052928_172053043_172054568_172054695_172055587_172055777_172057348_172057474_172061138_172061269_172064719_172064813_172082325_172082506_172082960_172083085_172090231_172090363_172093411_172093961_172096425_172096561_172105655_172105738_172106619_172106815_172107779_172107853_172117480_172117631_172127372_172127422_172156623_172156789_172187886
transcript_152324.known	chr5	-	2988	3	FSM	ENSG00000168246.6	ENST00000393792.3	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	7	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTCTTTGCCTTTA	12	True	NA	-20	True	AAAAAG	-11	NA	172283764	172209645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172212228_172234121_172234359_172283595
transcript_152333.nic	chr5	-	1660	13	NIC	ENSG00000174705.13	novel	7779	13	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	88.5959539457393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTCTATGGATTT	NA	False	NA	-1	True	AATAAA	-36	NA	172454553	172333498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_172333770_172346135_172346262_172347282_172347333_172350362_172350590_172353887_172354006_172358772_172358878_172362734_172362870_172373789_172373816_172382035_172382128_172394562_172394640_172406276_172406353_172422415_172422497_172454277
transcript_152334.known	chr5	-	7779	13	FSM	ENSG00000174705.13	ENST00000311601.6	7779	13	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	34.9567192714394	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTCTATGGATTT	-7	True	NA	-1	True	AATAAA	-36	NA	172454525	172333498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172339917_172346135_172346262_172347282_172347333_172350362_172350590_172353887_172354006_172358772_172358878_172362734_172362870_172373789_172373816_172382035_172382128_172394562_172394640_172406276_172406353_172422415_172422497_172454277
transcript_152345.known	chr5	-	2013	4	FSM	ENSG00000120129.6	ENST00000239223.4	2013	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	3.29983164553722	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAACGCTTTTATTTCTT	0	True	NA	-4	True	AATAAA	-21	NA	172771195	172768095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172769133_172769574_172769795_172770160_172770307_172770585
transcript_152357.known	chr5	+	2903	10	FSM	ENSG00000113719.17	ENST00000393784.8	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_8	18.7603469393279	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGTGTGATTCTTTC	-4	True	NA	29	True	ATTAAA	-18	NA	172834250	172952683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172924004_172924110_172926508_172926570_172932435_172932537_172935187_172935311_172950708
transcript_152374.known	chr5	+	647	7	FSM	ENSG00000113719.17	ENST00000520326.6	974	7	-19	346	3	-37	multi-exon	FALSE	canonical	2	2	junction_5	77.3162696691683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACACACAGTGCCACAG	4	True	NA	NA	False	NA	NA	NA	172834334	172924024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172915517_172915691_172924004
transcript_152379.nic	chr5	+	1831	6	ISM	ENSG00000113719.17	ENST00000689975.1	2602	10	-108	27210	-31	896	5prime_fragment	FALSE	canonical	3	145	junction_5	9.91160935469109	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTACAAATAAATGTGAGA	2946	False	NA	NA	False	AATAAA	-13	NA	172834219	172925266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172924004
transcript_15238.nnic	chr1	-	4465	21	NIC	ENSG00000198952.8	novel	4559	22	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_11	107.651103106285	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	8636	False	NA	-15	True	AATAAA	-15	NA	156282869	156249223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_152380.nic	chr5	+	2485	5	FSM	ENSG00000113719.17	ENST00000326654.7	2239	5	-31	-215	1	215	multi-exon	FALSE	canonical	3	159	junction_1	5.30919014539883	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTTGCGG	46	False	NA	NA	False	AATACA	-14	NA	172834300	172916835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713
transcript_152383.known	chr5	+	586	6	FSM	ENSG00000113719.17	ENST00000523291.5	586	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	66.0708710401187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTTGCTGTTTCTTTCTT	37	False	NA	NA	False	NA	NA	NA	172834410	172920571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172920363
transcript_152384.known	chr5	+	742	4	FSM	ENSG00000037241.7	ENST00000521476.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	393.146565827838	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACATAGTATTTGCATT	8	True	NA	23	True	AATAAA	-20	NA	172958892	172969721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172959008_172959864_172960042_172968458_172968600_172969412
transcript_152385.known	chr5	+	722	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	191.628691890217	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	-23	True	NA	11	True	AATAAA	-17	NA	172959423	172969771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
transcript_152386.known	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	379.484152794583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	13	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
transcript_152388.known	chr5	+	695	4	FSM	ENSG00000037241.7	ENST00000519974.5	695	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	409.636424161719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTCCACATAGTATTT	4491	False	NA	18	True	AATAAA	-15	NA	172958728	172969716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172958802_172959864_172960042_172968458_172968600_172969412
transcript_152390.known	chr5	+	1419	4	FSM	ENSG00000113732.9	ENST00000519374.6	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_2	45.7917993628651	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCATGGCTTTTTGAC	-36	True	NA	15	True	ATTAAA	-25	NA	172983770	173035445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172983965_172994774_172994823_173020237_173020368_173034398
transcript_152391.known	chr5	+	502	3	FSM	ENSG00000113732.9	ENST00000517669.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_2	50	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCTATCACCCTGC	24	True	NA	NA	False	NA	NA	NA	172983830	173020557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172983965_172994774_172994823_173020237
transcript_152392.known	chr5	+	773	3	FSM	ENSG00000113732.9	ENST00000265093.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	820.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTCGGTGTTTGTAA	9	True	NA	34	True	AATAAA	-24	NA	172983815	173034892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172983965_173020237_173020368_173034398
transcript_152393.known	chr5	+	1339	7	FSM	ENSG00000113734.18	ENST00000231668.13	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	62.9197019135413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTTTATTTAATAGA	NA	False	NA	-12	True	AAGAAA	-34	NA	173144441	173164340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_152395.known	chr5	+	1168	6	FSM	ENSG00000113734.18	ENST00000351486.10	1168	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	11.6378692207809	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTGGGAATGTGTGTT	0	True	NA	35	True	AATAAA	-23	NA	173144530	173164387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_152396.known	chr5	+	721	5	FSM	ENSG00000113734.18	ENST00000393770.4	721	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	65.1819568592414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCACTTTTCTGCAAGTA	15	True	NA	NA	False	NA	NA	NA	173144545	173164057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173159932_173160052_173163724
transcript_152397.known	chr5	-	1558	2	FSM	ENSG00000183072.10	ENST00000329198.5	1558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCACGTGTGCTTCTTT	-3	True	NA	NA	False	ATTAAA	-14	NA	173235206	173232108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173233210_173234749
transcript_152398.known	chr5	-	4254	4	FSM	ENSG00000113739.11	ENST00000265087.9	4254	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	8.73053390247253	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTTGAGTAGCGTCAT	1	True	NA	-18	True	AATAAA	-18	NA	173328414	173314722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173318250_173323218_173323431_173325867_173326011_173328042
transcript_152400.known	chr5	-	1921	4	FSM	ENSG00000145919.11	ENST00000311086.9	1921	4	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_2	87.3091569589862	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCCTTGGATAATATA	-2	True	NA	-41	True	NA	NA	NA	173616650	173607144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173608293_173609237_173609435_173613130_173613256_173616199
transcript_152401.known	chr5	-	850	3	FSM	ENSG00000145919.11	ENST00000477985.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	442.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATAGCTTTAAAGTTG	436	False	NA	NA	False	NA	NA	NA	173616358	173607798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173608293_173609237_173609435_173616199
transcript_152402.known	chr5	-	814	2	FSM	ENSG00000145919.11	ENST00000480951.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGAACATAGCCAGTCC	-5	True	NA	NA	False	GATAAA	-11	NA	173616653	173607932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173608293_173616199
transcript_152403.known	chr5	+	6705	9	FSM	ENSG00000113742.14	ENST00000334035.9	6705	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.59166304662544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTTTAATATACTTAT	-10	True	NA	3	True	AATAAA	-14	NA	173889339	173960309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173890859_173910522_173910605_173943025_173943050_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_152404.known	chr5	+	2607	8	FSM	ENSG00000113742.14	ENST00000520867.5	2607	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.84224572275888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCAGTCTGTAACTTAAC	-10	True	NA	NA	False	NA	NA	NA	173889339	173956235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173890859_173910522_173910605_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_152406.known	chr5	+	1670	7	FSM	ENSG00000113742.14	ENST00000657000.1	1670	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.9462219947249	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGCTAGGTTTATTTT	3	True	NA	NA	False	AATAAA	-18	NA	173918200	173956845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173918255_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_152410.known	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_9	90.4416386406173	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	-6	True	NA	-14	True	AATAAA	-18	NA	175478559	175529742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
transcript_152428.nic	chr5	+	985	7	ISM	ENSG00000164466.13	ENST00000321442.10	4066	11	-24	16004	-24	0	5prime_fragment	FALSE	canonical	3	697	junction_6	58.7832648142498	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTATGTGCAGTGGTG	-30	True	NA	11	True	AATAAA	-15	NA	175478535	175513738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462
transcript_152429.nic	chr5	+	681	3	ISM	ENSG00000164466.13	ENST00000513725.1	597	4	-77	899	-46	10	5prime_fragment	FALSE	canonical	3	783	junction_2	34	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAGACAATAAAAAACAA	-1	True	NA	NA	False	AATAAA	-9	NA	175478513	175509413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_175478640_175492094_175492268_175509031
transcript_152430.known	chr5	+	592	3	FSM	ENSG00000164466.13	ENST00000508290.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	410.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAGACAA	-2	True	NA	NA	False	AAAACA	-31	NA	175478563	175509403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175478640_175492094_175492268_175509060
transcript_152431.known	chr5	+	2611	10	FSM	ENSG00000164466.13	ENST00000507823.5	2611	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	292.913883607241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	24	True	NA	NA	False	NA	NA	NA	175478589	175524103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175478668_175492094_175492268_175509060_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374
transcript_152433.nic	chr5	+	4794	3	FSM	ENSG00000113749.8	ENST00000636584.2	4664	3	-130	0	-89	0	multi-exon	FALSE	canonical	3	17	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTCACGGTTTTATT	142	False	NA	25	True	AATAAA	-15	NA	175657940	175710756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175658156_175682708_175684310_175707778
transcript_152434.nic	chr5	+	821	2	ISM	ENSG00000113749.8	ENST00000377291.2	2561	3	-291	3130	-291	-3130	5prime_fragment	FALSE	canonical	3	41	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACACATTTTGGATCTG	57	False	NA	NA	False	NA	NA	NA	175657738	175683112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_175658156_175682708
transcript_152435.known	chr5	+	4597	4	FSM	ENSG00000145920.15	ENST00000393745.8	4597	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGTCTGTGCTCTTC	-20	True	NA	20	True	AAAAAG	-14	NA	175871577	175884021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175871706_175878651_175878771_175878907_175879084_175879847
transcript_152442.known	chr5	-	1601	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_1	88.2011337795609	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	NA	False	NA	-14	True	AATAAA	-22	NA	175968315	175959530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_152444.known	chr5	-	1796	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	75.0633066151499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGTTAATACTGGTA	NA	False	NA	NA	False	NA	NA	NA	175968280	175960218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_152451.known	chr5	+	3305	10	FSM	ENSG00000170085.18	ENST00000429602.7	3305	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	12.9957257930786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGTTCAGTGTGACTC	-6	True	NA	8	True	AATAAA	-21	NA	176238423	176345989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176238638_176289653_176290956_176295029_176295263_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
transcript_152456.known	chr5	+	2056	9	FSM	ENSG00000170085.18	ENST00000341199.10	2056	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	33.6888334615492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCAAGTTCAGTGTG	NA	False	NA	4	True	AATAAA	-17	NA	176238366	176345985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176238638_176295029_176295263_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
transcript_152467.known	chr5	-	2786	9	FSM	ENSG00000122203.15	ENST00000298569.9	2786	9	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_6	44.6764409392691	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	16	True	NA	-7	True	AATAAA	-22	NA	176361764	176346061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361601
transcript_152469.known	chr5	-	1243	8	FSM	ENSG00000122203.15	ENST00000510164.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	232.521844486202	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCACGCCTGTA	19	True	NA	NA	False	TTTAAA	-17	NA	176361761	176347493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176361601
transcript_152470.known	chr5	-	2700	8	FSM	ENSG00000122203.15	ENST00000393725.6	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	242.836049504137	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	15	True	NA	-7	True	AATAAA	-22	NA	176361765	176346061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359810_176359919_176361601
transcript_152475.known	chr5	-	2631	7	FSM	ENSG00000122203.15	ENST00000614420.4	2631	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	260.338508271229	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	NA	False	NA	-10	True	AATAAA	-19	NA	176361807	176346064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176361601
transcript_152477.nnic	chr5	-	2550	7	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	265.950757764582	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	176361834	176346061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176359480_176359568_176359810_176359919_176361601
transcript_152479.known	chr5	-	2452	6	FSM	ENSG00000122203.15	ENST00000620366.4	2452	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	278.238458880148	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	NA	False	NA	-10	True	AATAAA	-19	NA	176361807	176346064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176361601
transcript_152483.nic	chr5	-	2425	6	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	259.302911668959	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	176361834	176346061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176359480_176359568_176359810_176359919_176361601
transcript_152487.known	chr5	-	2243	5	FSM	ENSG00000122203.15	ENST00000393728.6	2243	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	302.566108478792	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	41	False	NA	-7	True	AATAAA	-22	NA	176361739	176346061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176359810_176359919_176361601
transcript_152491.known	chr5	-	1139	6	FSM	ENSG00000175416.16	ENST00000310418.9	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	128.169575172894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-5	True	NA	-49	True	NA	NA	NA	176416539	176392500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176392946_176396478_176396533_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_152492.known	chr5	-	1489	6	FSM	ENSG00000175416.16	ENST00000510734.5	1489	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.080128165943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCTGGGAGGGGGGCC	-5	True	NA	NA	False	NA	NA	NA	176416539	176392648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176406156_176406709_176410256_176410304_176416176
transcript_152494.known	chr5	-	1087	5	FSM	ENSG00000048162.22	ENST00000618911.4	1087	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	387.077188684634	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGTGTGTACATAATAA	9117	False	NA	-46	True	NA	NA	NA	176388927	176383980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176384287_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_152495.known	chr5	-	881	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	97.7177056627917	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGATGATTTTGTAT	-9	True	NA	-11	True	AATAAA	-15	NA	176388598	176383945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_152497.known	chr5	-	1085	5	FSM	ENSG00000175416.16	ENST00000345807.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	4.74341649025257	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-5	True	NA	-49	True	NA	NA	NA	176416539	176392500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_152504.known	chr5	-	1000	4	FSM	ENSG00000048162.22	ENST00000509257.1	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_3	23.6267268622258	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTAATTTATTGTTTTTG	21	True	NA	NA	False	NA	NA	NA	176388568	176384642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176385328_176386839_176386910_176388234_176388344_176388432
transcript_152513.known	chr5	+	654	2	FSM	ENSG00000146066.3	ENST00000274787.3	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	0	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATCATCCCCATGGT	1	True	NA	36	True	AATAAA	-25	NA	176388750	176389761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176388974_176389330
transcript_152515.known	chr5	+	4485	11	FSM	ENSG00000113194.13	ENST00000261942.7	4485	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.996682191552	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGGCTGTGGATCTTTC	-2	True	NA	36	True	ATTAAA	-22	NA	176448384	176510074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913_176499086_176500002_176500147_176506767
transcript_152519.nic	chr5	+	931	9	ISM	ENSG00000113194.13	ENST00000261942.7	4485	11	-5	11097	-5	0	5prime_fragment	FALSE	canonical	0	0	junction_3	117.541947299677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCTGACCAGGAGAAAGA	-7	True	NA	7	True	NA	NA	NA	176448379	176498977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913
transcript_152521.nic	chr5	+	1250	8	ISM	ENSG00000113194.13	ENST00000261942.7	4485	11	-65	13088	-65	0	5prime_fragment	TRUE	canonical	0	0	junction_3	124.554061698984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAAATTAGCTAGGC	NA	False	NA	NA	False	NA	NA	NA	176448319	176496986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485
transcript_152529.nic	chr5	-	3926	11	NIC	ENSG00000146083.12	novel	4122	11	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	28.9981033862561	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	-12	True	NA	-16	True	AATAAA	-18	NA	176537270	176526711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532130_176532365_176532517_176536939
transcript_152530.known	chr5	-	1647	11	FSM	ENSG00000146083.12	ENST00000513029.5	1647	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	41.5865362827923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGAGGGAGTGGCCCA	5474	False	NA	NA	False	NA	NA	NA	176538025	176528957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532133_176532365_176532517_176537730
transcript_152532.known	chr5	-	4122	11	FSM	ENSG00000146083.12	ENST00000274811.9	4122	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	33.4366565314177	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	-6	True	NA	-16	True	AATAAA	-18	NA	176537402	176526711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176536939
transcript_152544.nnic	chr5	-	1338	7	NNC	ENSG00000074317.11	novel	1383	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	35.1362427637839	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAGCCGCACCGGCAG	-10	True	NA	-12	True	AATAAA	-15	NA	176630547	176620209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808_176629864_176630279
transcript_152545.known	chr5	-	1383	7	FSM	ENSG00000074317.11	ENST00000310112.7	1383	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	36.0786178597056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGCCACCTCTGGCTTC	218	False	NA	NA	False	NA	NA	NA	176630364	176620083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808_176629966_176630279
transcript_152546.known	chr5	-	1398	6	FSM	ENSG00000074317.11	ENST00000393693.7	1398	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	15.4867685460848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCACCTCTGGCTTCGC	3	True	NA	NA	False	NA	NA	NA	176630534	176620081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176630279
transcript_152554.known	chr5	+	2361	9	FSM	ENSG00000048140.18	ENST00000515708.5	2361	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	130.830042421456	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	81	False	NA	37	True	AATAAA	-17	NA	176647567	176659053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656925_176657517
transcript_152555.known	chr5	+	2475	9	FSM	ENSG00000048140.18	ENST00000508164.6	2475	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_8	49.8395864248491	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	-3	True	NA	35	True	AATAAA	-15	NA	176647483	176659051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_152560.known	chr5	+	1019	9	FSM	ENSG00000048140.18	ENST00000503045.5	1019	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	179.002400472731	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATGACCACCTGGCT	74	False	NA	NA	False	CATAAA	-23	NA	176647560	176657732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652811_176652914_176654894_176655021_176656077_176656135_176656699_176656817_176656894_176656957_176657517
transcript_152565.nic	chr5	+	3169	8	ISM	ENSG00000048140.18	ENST00000508164.6	2475	9	-133	0	-36	0	intron_retention	FALSE	canonical	3	407	junction_3	18.8072934180941	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	4425	False	NA	35	True	AATAAA	-15	NA	176647350	176659051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894
transcript_152570.nic	chr5	+	2431	8	NIC	ENSG00000048140.18	novel	2475	9	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	146.719780116898	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	-4	True	NA	35	True	AATAAA	-15	NA	176647401	176659051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_152572.known	chr5	+	4445	8	FSM	ENSG00000048140.18	ENST00000514705.5	4445	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_7	53.2805436020562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	10	True	NA	37	True	AATAAA	-17	NA	176647496	176659053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_152581.nic	chr5	+	2376	7	NIC	ENSG00000048140.18	novel	2475	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	141.454350704859	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	4459	False	NA	35	True	AATAAA	-15	NA	176647384	176659051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_176647703_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_152586.known	chr5	+	707	6	FSM	ENSG00000048140.18	ENST00000507471.1	707	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	153.007189373572	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTTCCTGCTGGGACT	133	False	NA	NA	False	NA	NA	NA	176647619	176657056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894
transcript_152597.known	chr5	+	2810	4	FSM	ENSG00000048140.18	ENST00000298564.14	2810	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	193.013528598962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTCTTGCATTTTC	-20	True	NA	38	True	AATAAA	-18	NA	176647466	176659054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176652742_176652914_176656077_176656126_176656699
transcript_152600.known	chr5	+	560	2	FSM	ENSG00000248859.2	ENST00000512115.2	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAAATGGCTAATTT	NA	False	NA	4	True	ATTAAA	-14	NA	176743204	176743871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176743443_176743549
transcript_152607.known	chr5	-	2570	15	FSM	ENSG00000087206.17	ENST00000377227.8	2570	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.8393848849912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCCTTCATGTTGC	343	False	NA	3	True	AATAGA	-14	NA	177006408	176905004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
transcript_152608.nic	chr5	-	2641	15	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	45.0885749590374	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-28	True	NA	-42	True	AATATA	-1	NA	177006779	176905049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_152609.known	chr5	-	2467	15	FSM	ENSG00000087206.17	ENST00000512031.5	2467	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	42.366777993506	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATGTTTGTACGAAA	36	True	NA	-45	True	TTTAAA	-2	NA	177006715	176905052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969596_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_152626.known	chr5	+	2306	7	FSM	ENSG00000113761.12	ENST00000511834.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	50.1356493259371	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	2	True	NA	24	True	AATAAA	-15	NA	177022731	177065965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050702_177050937_177062057_177062152_177064511
transcript_152627.known	chr5	+	4314	7	FSM	ENSG00000113761.12	ENST00000358149.8	4314	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	24.1344612996069	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCTGAAAAAGGTATCA	-7	True	NA	NA	False	AATAAA	-35	NA	177022695	177067985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511
transcript_152634.nnic	chr5	+	2117	6	NIC	ENSG00000113761.12	novel	2306	7	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	49.3696262898556	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	-16	True	NA	24	True	AATAAA	-15	NA	177022686	177065965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177062057_177062152_177064511
transcript_152635.nnic	chr5	+	2922	6	NIC	ENSG00000113761.12	novel	4314	7	NA	NA	-9	805	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	49.3696262898556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAAGGCTGGGCGCCGTG	-16	True	NA	NA	False	AATAAA	-1	NA	177022686	177066770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177062057_177062152_177064511
transcript_152637.known	chr5	+	1622	6	FSM	ENSG00000113761.12	ENST00000508155.5	1622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	58.5101700561535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTACCCTCGGCCCT	13	True	NA	NA	False	NA	NA	NA	177022715	177065458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177050750_177050937_177062057_177062152_177064511
transcript_152642.known	chr5	+	977	5	FSM	ENSG00000113761.12	ENST00000513587.5	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	56.5790376376269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGGCAGGGCAGGA	5	False	NA	NA	False	NA	NA	NA	177022734	177065018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177062057_177062152_177064511
transcript_152647.nic	chr5	+	1766	3	ISM	ENSG00000113761.12	ENST00000512315.5	1575	4	0	14589	0	0	5prime_fragment	FALSE	canonical	3	7	junction_1	63.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	-7	True	NA	24	True	AATAAA	-15	NA	177022695	177065965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177022914_177062057_177062152_177064511
transcript_152656.known	chr5	+	2733	18	FSM	ENSG00000160867.15	ENST00000393648.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	134.488162095943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCGTCTTGACGGGAG	-4	True	NA	-88	True	NA	NA	NA	177086904	177098022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093178_177093405_177093502_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_152658.known	chr5	+	2638	18	FSM	ENSG00000160867.15	ENST00000502906.5	2638	18	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	52.3177674306476	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGCCTGACACAGTGC	5	True	NA	NA	False	GGGGCT	-3	NA	177086913	177097732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_152668.known	chr5	+	3093	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	94.0906211197427	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	6	True	NA	34	True	AATAAA	-19	NA	177086914	177098144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_152689.nnic	chr5	+	2877	17	NIC	ENSG00000160867.15	novel	3093	18	NA	NA	-82	0	combination_of_known_splicesites	TRUE	canonical	3	13	junction_2	107.417410134484	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	NA	False	NA	34	True	AATAAA	-19	NA	177086822	177098144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177087034_177089549_177089694_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_152757.nic	chr5	+	1217	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-147	90012	-15	71	5prime_fragment	FALSE	canonical	3	134	junction_1	11.6206712370672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAGACTTCAAATGG	-31	True	NA	NA	False	AAGAAA	-1	NA	177133752	177210139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_152759.nic	chr5	+	1537	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-153	89698	-21	0	5prime_fragment	FALSE	canonical	3	134	junction_1	11.6206712370672	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	-37	True	NA	NA	False	GATAAA	-1	NA	177133746	177210453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_152760.nic	chr5	+	1879	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-159	89362	-27	336	5prime_fragment	FALSE	canonical	3	134	junction_1	11.6206712370672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTTATGGCAGAACCCC	65	False	NA	NA	False	TATAAA	-19	NA	177133740	177210789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_152764.known	chr5	+	533	5	ISM	ENSG00000165671.22	ENST00000354179.9	12136	24	0	95915	0	-5832	5prime_fragment	FALSE	canonical	3	14	junction_1	62.1022342593244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGTCCTTAGGAGA	55	False	NA	NA	False	NA	NA	NA	177133078	177204236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133155_177135086_177135201_177135940_177136031_177191883_177192020_177204119
transcript_152766.nic	chr5	+	663	5	ISM	ENSG00000165671.22	ENST00000510954.6	1706	7	-107	34969	-21	-5832	5prime_fragment	FALSE	canonical	3	134	junction_1	12.3161479367536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGTCCTTAGGAGA	-37	True	NA	NA	False	NA	NA	NA	177133746	177204236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119
transcript_152781.nnic	chr5	+	891	2	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-56	74637	-56	-529	5prime_fragment	FALSE	canonical	3	49	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAAGAAATGAAGTGG	NA	False	NA	NA	False	NA	NA	NA	177131773	177135816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177131935_177135086
transcript_152783.known	chr5	+	470	2	ISM	ENSG00000165671.22	ENST00000689549.1	7734	20	0	149938	0	-919	5prime_fragment	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCAATTGTTTGCACTT	1	True	NA	NA	False	AAAAAG	-16	NA	177133024	177135426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133155_177135086
transcript_152784.known	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	14	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177133953_177135086
transcript_152795.known	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	41.6876405544857	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-4	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_152796.known	chr5	-	1588	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	19.7484176581315	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-17	True	NA	-27	True	AATAAA	-23	NA	177303719	177301197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_152799.nic	chr5	-	1470	8	NIC	ENSG00000169228.14	novel	1236	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	38	junction_7	43.0116263352131	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	8548	False	177303737	-5	True	AATAAA	-22	NA	177303722	177301450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_152800.known	chr5	-	1820	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	9.77098880473324	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	4	True	NA	-27	True	AATAAA	-23	NA	177303733	177301197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_152802.nnic	chr5	-	1231	7	NNC	ENSG00000213347.11	novel	861	7	NA	NA	-425	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	30.679345205239	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCCATAGTCTTGCCT	NA	False	NA	-7	True	ATTAAA	-17	NA	177312323	177307207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760_177311858_177312120
transcript_152812.known	chr5	+	1226	5	FSM	ENSG00000169230.10	ENST00000303204.9	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	4959	junction_3	178.612709514189	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCCCAGCTCTGGAGT	5	True	NA	14	True	AATAAA	-16	NA	177303798	177306949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177304078_177304624_177304851_177305870_177305985_177306097_177306177_177306421
transcript_152814.known	chr5	+	886	5	FSM	ENSG00000169230.10	ENST00000504594.5	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	2249.76826584428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTACGTGGTGGGTT	21	True	NA	39	True	ATTAAA	-21	NA	177303814	177306669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177304078_177304624_177304851_177305914_177305985_177306097_177306177_177306421
transcript_152821.known	chr5	-	1608	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCCCTTTCCCTGCT	21	True	NA	-6	True	AATAAA	-21	NA	177303681	177301451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
transcript_152822.known	chr5	-	1854	4	FSM	ENSG00000213347.11	ENST00000503782.1	1854	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCCATAGTCTTGCCT	395	False	NA	-7	True	ATTAAA	-17	NA	177311875	177307207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177307704_177307780_177307965_177310425_177311485_177311760
transcript_152823.known	chr5	-	1483	6	FSM	ENSG00000213347.11	ENST00000439742.7	1067	6	-411	-5	-411	3	multi-exon	FALSE	canonical	3	86	junction_1	6.43117407632541	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	NA	False	NA	-4	True	ATTAAA	-20	NA	177312309	177307204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
transcript_152824.known	chr5	+	1171	5	FSM	ENSG00000169230.10	ENST00000503216.5	1171	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	2166.80783354224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCCCAGCTCTGGAGT	27	False	NA	14	True	AATAAA	-16	NA	177303820	177306949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177304078_177304624_177304851_177305870_177305985_177306097_177306177_177306454
transcript_152825.known	chr5	-	1385	7	FSM	ENSG00000169228.14	ENST00000303270.6	1385	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	21.3124898175277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTGTAAATAAAATCAGT	-8	True	NA	-40	True	NA	NA	NA	177303710	177301485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008
transcript_152844.nnic	chr5	-	1778	9	NNC	ENSG00000169223.15	novel	1611	8	NA	NA	-226	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	814.786695629599	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	3973	False	NA	-32	True	AATAAA	-14	NA	177351894	177331566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451_177351564_177351622
transcript_152849.nnic	chr5	-	1175	9	NNC	ENSG00000169223.15	novel	1611	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	814.786695629599	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGCTTCTTGCCCA	-16	True	NA	-9	True	AATAAA	-18	NA	177351678	177331953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451_177351564_177351622
transcript_152852.known	chr5	-	1149	8	FSM	ENSG00000169223.15	ENST00000515209.5	1149	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	856.973530894077	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCGGGATTATAAAAG	15	True	NA	-86	True	NA	NA	NA	177351647	177332030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177332270_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_152859.known	chr5	-	1611	8	FSM	ENSG00000169223.15	ENST00000303127.12	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	2229	junction_4	150.905701059453	2585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-6	True	NA	-32	True	AATAAA	-14	NA	177351668	177331566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_152885.nnic	chr5	+	2281	15	NNC	ENSG00000169220.18	novel	1536	11	NA	NA	-3404	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	43.254113877722	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	5138	False	NA	9	True	NA	NA	NA	177363023	177372596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_177363125_177365962_177365985_177366176_177366356_177366707_177366801_177366890_177367035_177367413_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_152895.nic	chr5	+	1881	10	ISM	ENSG00000169220.18	ENST00000511890.1	1536	11	332	-298	-27	0	3prime_fragment	FALSE	canonical	3	53	junction_3	30.0813711271426	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9389	False	NA	9	True	NA	NA	NA	177367274	177372596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_152905.nic	chr5	+	2212	9	NIC	ENSG00000169220.18	novel	1536	11	NA	NA	-27	0	intron_retention	FALSE	canonical	3	53	junction_2	30.8210561142865	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9389	False	NA	9	True	NA	NA	NA	177367274	177372596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177367558_177367713_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_152906.nnic	chr5	+	1733	9	NIC	ENSG00000169220.18	novel	1536	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	41.7185510294881	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9425	False	NA	9	True	NA	NA	NA	177367310	177372596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177367558_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_152915.known	chr5	+	2329	8	FSM	ENSG00000169220.18	ENST00000425155.6	2329	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	32.2464995727269	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9428	False	NA	9	True	NA	NA	NA	177367313	177372596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_152919.nic	chr5	+	3120	16	NIC	ENSG00000198055.11	novel	2141	14	NA	NA	-485	-3	combination_of_known_junctions	TRUE	canonical	2	2	junction_1	142.484930977123	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCCGCCCCTTCCTGTGT	NA	False	NA	6	True	AATAGA	-17	NA	177426010	177442622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177426620_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441736
transcript_152923.known	chr5	+	1789	16	FSM	ENSG00000198055.11	ENST00000355958.9	1789	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	115.200115740683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCACTCCCCCTGCCC	121	False	NA	NA	False	NA	NA	NA	177426842	177441353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441244
transcript_152924.known	chr5	+	3002	16	FSM	ENSG00000198055.11	ENST00000355472.10	3002	16	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_15	84.1305863259942	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGCCGCCCCTGCCTGCC	-9	True	NA	93	True	NA	NA	NA	177426675	177442891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441736
transcript_152933.known	chr5	+	1660	13	FSM	ENSG00000198055.11	ENST00000507633.5	1660	13	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_8	40.5931712921712	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGATGGGTCTGGCT	23	False	NA	22	True	AATAAA	-22	NA	177426744	177436685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392
transcript_152937.nnic	chr5	-	1296	7	NNC	ENSG00000131187.10	novel	2036	14	NA	NA	228	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	23.7416652041652	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAAGCTCTTTTCTTC	4826	False	NA	-9	True	AATAAA	-19	NA	177404753	177402140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480_177403618_177403858_177404091_177404195_177404414_177404656
transcript_152938.nic	chr5	-	1531	6	ISM	ENSG00000131187.10	ENST00000253496.4	2036	14	4819	0	236	0	intron_retention	FALSE	canonical	3	16	junction_5	20.7518673858523	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAAGCTCTTTTCTTC	4834	False	NA	-9	True	AATAAA	-19	NA	177404745	177402140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480_177403618_177403858_177404091_177404195
transcript_152944.known	chr5	+	1461	4	FSM	ENSG00000131188.12	ENST00000323249.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5675468285856	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGGGTGCACCGGCTGC	-7	True	NA	21	True	AATAAA	-25	NA	177446813	177456286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177446961_177453955_177454041_177454828_177455495_177455723
transcript_152946.known	chr5	+	1345	3	FSM	ENSG00000131188.12	ENST00000502922.5	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTTTGGTACAAGC	6	True	NA	3	True	AATAAA	-7	NA	177446826	177456268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177446961_177454828_177455495_177455723
transcript_152947.nic	chr5	+	1370	2	ISM	ENSG00000131188.12	ENST00000510492.1	1285	3	6354	-18	6354	0	3prime_fragment	FALSE	canonical	3	42	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGGGTGCACCGGCTGC	6465	False	NA	21	True	AATAAA	-25	NA	177454687	177456286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177455495_177455723
transcript_152948.known	chr5	-	421	2	FSM	ENSG00000246334.3	ENST00000506465.2	1190	2	284	485	1	-485	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACGCCTGTGGAGAAT	9595	False	NA	NA	False	NA	NA	NA	177447698	177445978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177446345_177447643
transcript_152950.known	chr5	+	2571	16	FSM	ENSG00000198055.11	ENST00000528793.5	2571	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	132.522434159487	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCCCTTCCTGTGTGCG	121	False	NA	9	True	AATAGA	-20	NA	177426842	177442625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441734
transcript_152957.known	chr5	-	3072	15	FSM	ENSG00000113758.14	ENST00000292385.9	3072	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	544.000586171653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCCCTCCCCGCCCTTCT	437	False	NA	-16	True	AATAAA	-26	NA	177473198	177456926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177472118_177472398_177472775
transcript_152997.known	chr5	-	2995	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_6	129.320207146182	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGCCTGCCCTGACC	9754	False	NA	-37	True	AATAAA	-19	NA	177473741	177456607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_152998.known	chr5	-	2667	13	FSM	ENSG00000113758.14	ENST00000472831.5	2667	13	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_6	131.32495214374	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCCCTCCCCG	11	True	NA	-23	True	AATAAA	-19	NA	177473624	177456933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467818_177468107_177468221_177468843_177468900_177473435
transcript_152999.known	chr5	-	2701	15	FSM	ENSG00000113758.14	ENST00000393565.6	3024	15	-3	326	-3	-2	multi-exon	FALSE	canonical	0	0	junction_4	545.398828980281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTGGGACCCCCTCCC	-2	True	NA	-25	True	AATAAA	-17	NA	177473637	177456935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177459602_177459741_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_153005.known	chr5	-	1686	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	161.178426618144	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	5088	False	NA	-8	True	AATAAA	-17	NA	177497561	177483393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153011.nic	chr5	-	2554	14	NIC	ENSG00000196923.14	novel	1686	14	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_8	156.396439070224	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	4981	False	NA	-8	True	AATAAA	-17	NA	177497668	177483393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153019.nic	chr5	-	2215	13	NIC	ENSG00000196923.14	novel	1686	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	109	junction_8	166.890433119058	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	5038	False	NA	-8	True	AATAAA	-17	NA	177497611	177483393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153020.known	chr5	-	1567	13	FSM	ENSG00000196923.14	ENST00000359895.6	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	190.158906502489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	5088	False	NA	-8	True	AATAAA	-17	NA	177497561	177483393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153023.known	chr5	-	1712	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	124.510262852327	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-2	True	NA	-8	True	AATAAA	-17	NA	177497604	177483393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153033.known	chr5	-	1904	13	FSM	ENSG00000196923.14	ENST00000486828.6	1904	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	165.079505255969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTGCCCTTCC	1	True	NA	-12	True	AATAAA	-13	NA	177497601	177483397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490032_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153094.nic	chr5	-	1089	9	NIC	ENSG00000196923.14	novel	977	8	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	193.039463258164	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	4981	False	NA	-19	True	AATAAA	-15	NA	177497668	177490245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153112.known	chr5	-	977	8	FSM	ENSG00000196923.14	ENST00000355572.6	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	111.535296874934	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	5076	False	NA	-19	True	AATAAA	-15	NA	177497573	177490245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_153138.known	chr5	-	2099	17	FSM	ENSG00000183258.12	ENST00000330503.12	2099	17	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_16	41.6005934452863	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-2	True	NA	-17	True	ATTAAA	-19	NA	177516961	177511576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724_177516836_177516918
transcript_153143.known	chr5	-	2375	16	FSM	ENSG00000183258.12	ENST00000503078.5	2375	16	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_15	41.9314784963384	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGGCCCTGCCTCTGT	-2	True	NA	-18	True	ATTAAA	-18	NA	177516961	177511577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516836_177516918
transcript_153144.nic	chr5	-	2867	16	NIC	ENSG00000183258.12	novel	2099	17	NA	NA	-342	0	intron_retention	FALSE	canonical	3	211	junction_15	40.9191071913029	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	NA	False	NA	-17	True	ATTAAA	-19	NA	177517303	177511576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724_177516836_177516918
transcript_153168.known	chr5	-	2968	9	FSM	ENSG00000146067.16	ENST00000514747.6	2968	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	68.7430678323276	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATGTTGGTGATTTG	-4	True	NA	0	True	GATAAA	-19	NA	177554563	177519788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177554248
transcript_153172.nnic	chr5	-	1793	5	NIC	ENSG00000146067.16	novel	2968	9	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	99.8311073764085	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATGTTGGTGATTTG	0	True	NA	0	True	GATAAA	-19	NA	177554453	177519788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177554248
transcript_153176.known	chr5	+	2546	5	FSM	ENSG00000184840.12	ENST00000332598.7	2546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1394	junction_4	91.7179780631911	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	2	True	NA	NA	False	NA	NA	NA	177592202	177597242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177592399_177592574_177592676_177593649_177593776_177594138_177594286_177595266
transcript_153179.known	chr5	+	1018	4	FSM	ENSG00000184840.12	ENST00000507723.1	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	1394	junction_3	99.5400533565369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCGTCACAACCCATC	1	True	NA	NA	False	NA	NA	NA	177592271	177595420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177592399_177592574_177592676_177593649_177594286_177595266
transcript_153192.known	chr5	+	1064	6	FSM	ENSG00000027847.14	ENST00000505433.5	1064	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	68.5349545852334	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAAGCCTGTACCTAC	4	True	NA	NA	False	NA	NA	NA	177600161	177609707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177600261_177604178_177604542_177607282_177607528_177608538_177608623_177608909_177609015_177609539
transcript_153206.known	chr5	+	1056	6	FSM	ENSG00000170089.16	ENST00000512851.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_5	142.927394155214	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTTGTAGGGAGAGGA	32	False	NA	NA	False	NA	NA	NA	177875594	177883831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651_177882753_177883666
transcript_153222.known	chr5	+	5985	5	FSM	ENSG00000145911.6	ENST00000274605.6	5985	5	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	25.3081014696875	1288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAGGAAGGATGCTTTA	-10	True	NA	NA	False	AATAAA	-15	NA	178113531	178126081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178113772_178119553_178119914_178120177_178120700_178121097_178121353_178121473
transcript_153234.known	chr5	+	4066	12	FSM	ENSG00000145916.19	ENST00000515098.5	4066	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	135.441244008287	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	NA	False	NA	3	True	ATTAAA	-15	NA	178130995	178150565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178131055_178131236_178131377_178135172_178135313_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_153239.known	chr5	+	3911	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	69.2257899918809	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCACTTTGTTG	-6	True	NA	6	True	ATTAAA	-18	NA	178131013	178150568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_153248.nnic	chr5	+	2509	11	NNC	ENSG00000145916.19	novel	3911	11	NA	NA	-456	0	intron_retention	FALSE	canonical	0	0	junction_1	103.94945887305	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCCCTTCTCATTT	NA	False	NA	54	True	NA	NA	NA	178130539	178148549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_178131239_178131277_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_153263.nic	chr5	+	2570	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	-478	0	intron_retention	FALSE	canonical	3	318	junction_2	17.3809886206769	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCCCTTCTCATTT	NA	False	NA	54	True	NA	NA	NA	178130517	178148549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_153264.nic	chr5	+	4090	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	318	junction_2	17.3809886206769	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	-6	True	NA	3	True	ATTAAA	-15	NA	178131013	178150565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_153271.nic	chr5	+	2231	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	-461	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	96.0302164380348	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCCCTTCTCATTT	NA	False	NA	54	True	NA	NA	NA	178130534	178148549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_178131055_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_15329.nnic	chr1	-	1443	6	NNC	ENSG00000198715.13	novel	1611	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	197.612347792338	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-15	True	NA	-5	True	AATAGA	-20	NA	156295685	156292687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294675_156294760_156295525
transcript_15331.known	chr1	-	1611	6	FSM	ENSG00000198715.13	ENST00000362007.6	1611	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	68.0352849630249	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-9	True	NA	-5	True	AATAGA	-20	NA	156295679	156292687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_153312.known	chr5	+	808	5	FSM	ENSG00000145916.19	ENST00000507457.5	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	17.6688284840846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGATTTCAAGCAGCC	5	True	NA	NA	False	NA	NA	NA	178131024	178143644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626
transcript_153319.known	chr5	-	780	4	FSM	ENSG00000145912.9	ENST00000274606.8	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	5082	junction_2	201.939484884843	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGAGTCTGTGGGTGT	5	True	NA	NA	False	AGTAAA	-15	NA	178153885	178149462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178149839_178150887_178150994_178153490_178153561_178153657
transcript_153320.known	chr5	-	599	3	FSM	ENSG00000145912.9	ENST00000314397.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	2489	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATGCTAAGACTAAAAT	110	False	NA	NA	False	ACTAAA	-30	NA	178153829	178149481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178149839_178153490_178153561_178153657
transcript_153331.known	chr5	-	2081	13	FSM	ENSG00000175309.15	ENST00000308158.10	2081	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	10.0069420348521	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAGTAGTTTCACTTAA	-7	True	NA	97	True	ATTAAA	-45	NA	178232802	178208470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178208916_178211889_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222581_178222851_178222935_178224447_178224565_178224641_178224730_178225354_178225430_178229939_178230100_178231404_178231524_178232491
transcript_153368.known	chr5	+	1747	8	FSM	ENSG00000197451.12	ENST00000506339.5	1747	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	662.984162706772	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAAGCCTGGGTGAGT	1	True	NA	13	True	AATAAA	-9	NA	178204532	178211155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209433_178210131_178210273_178210552
transcript_153373.known	chr5	+	1595	7	FSM	ENSG00000197451.12	ENST00000515193.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	711.790153220893	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAAGCCTGGGTGAGT	12	False	NA	13	True	AATAAA	-9	NA	178204543	178211155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209433_178210552
transcript_153385.known	chr5	-	562	4	FSM	ENSG00000175309.15	ENST00000511716.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	40.1026460750687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTAGTTTTGTGAG	26	True	NA	-9	True	AATAAA	-12	NA	178232541	178226465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178226699_178229939_178230100_178231404_178231524_178232491
transcript_153386.known	chr5	-	824	4	FSM	ENSG00000175309.15	ENST00000476170.2	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	32.0970749792286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCCCATGTGTTCCA	-4	True	NA	NA	False	NA	NA	NA	178232571	178228124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178228590_178229939_178230100_178231404_178231524_178232491
transcript_15339.known	chr1	-	1365	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	151.763590824677	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-19	True	NA	-4	True	AATAGA	-21	NA	156295689	156292686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_153392.known	chr5	+	1785	7	FSM	ENSG00000197451.12	ENST00000504898.5	1785	7	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_5	200.757454545418	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATTTAAAAACCCCCA	39	False	NA	0	True	NA	NA	NA	178204570	178211142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210131_178210273_178210552
transcript_153393.known	chr5	+	1674	6	FSM	ENSG00000197451.12	ENST00000506259.5	1674	6	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_5	415.555243018302	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCCCCAAGCCTGG	16	False	NA	7	True	AATAAA	-3	NA	178204547	178211149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210552
transcript_153395.known	chr5	-	2598	29	FSM	ENSG00000050767.18	ENST00000680889.1	2598	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	50.4240690017563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGATGGGATTTGGAG	NA	False	NA	NA	False	NA	NA	NA	178577549	178237475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178238701_178239140_178239180_178242041_178242129_178242340_178242395_178245941_178245969_178246253_178246308_178246390_178246454_178247525_178247553_178247774_178247832_178248191_178248255_178249116_178249207_178250060_178250106_178252543_178252598_178254948_178255027_178256352_178256398_178256865_178256929_178257522_178257568_178259720_178259748_178261721_178261749_178262216_178262253_178263207_178263325_178267306_178267334_178268729_178268757_178270336_178270364_178288323_178288351_178290361_178290370_178306874_178306920_178560681_178560749_178577502
transcript_153396.known	chr5	-	2899	29	FSM	ENSG00000050767.18	ENST00000390654.8	2899	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	45.4575379348909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGCCTGTCCTTGTG	-11	True	NA	-2	True	AATAAA	-16	NA	178590393	178237617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178238701_178239140_178239180_178242041_178242129_178242340_178242395_178245941_178245969_178246253_178246308_178246390_178246454_178247525_178247553_178247774_178247832_178248191_178248255_178249116_178249207_178250060_178250106_178252543_178252598_178254948_178255027_178256352_178256398_178256865_178256929_178257522_178257568_178259720_178259748_178261721_178261749_178262216_178262253_178263207_178263325_178267306_178267334_178268729_178268757_178270336_178270364_178288323_178288351_178290361_178290370_178306874_178306920_178560681_178560749_178589903
transcript_15341.known	chr1	-	1364	5	FSM	ENSG00000198715.13	ENST00000622703.4	1364	5	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_4	130.34833140474	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-19	True	NA	-4	True	AATAGA	-21	NA	156295689	156292686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156295525
transcript_153413.known	chr5	-	2504	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	21.8344465365064	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	4	True	NA	-5	True	CATAAA	-14	NA	178627050	178602663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
transcript_153426.known	chr5	-	2521	5	FSM	ENSG00000169131.13	ENST00000335815.7	2521	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	22.4388056723169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTTTGTTCTAGTA	10	True	NA	-10	True	ATTAAA	-16	NA	178730659	178711511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989_178729074_178730555
transcript_153433.known	chr5	-	766	4	FSM	ENSG00000169131.13	ENST00000520331.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	7.93025150224688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGATAAAAAGGGAAGTTT	1333	False	NA	NA	False	AAAAAG	-1	NA	178729383	178713472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989
transcript_153440.known	chr5	+	2794	5	FSM	ENSG00000178338.11	ENST00000322434.8	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	10.4642247682282	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTCTTCTTTGTTGT	-13	True	NA	1	True	ATTAAA	-11	NA	178859952	178885020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708
transcript_153442.known	chr5	+	2410	5	FSM	ENSG00000198939.8	ENST00000361362.7	2410	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTCTTTTACGATCT	1	True	NA	NA	False	TATAAA	-20	NA	178895912	178933212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178895975_178912583_178912720_178912981_178913072_178916564_178916711_178931236
transcript_153443.known	chr5	+	3252	5	FSM	ENSG00000234284.7	ENST00000444149.7	3252	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.11737237261468	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCCATGGTGGCGG	-1	True	NA	NA	False	AATACA	-16	NA	179023803	179035064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179023905_179024969_179025038_179027472_179027600_179028031_179028128_179032204
transcript_153447.known	chr5	-	2044	11	FSM	ENSG00000087116.16	ENST00000274609.5	2044	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.96992462263972	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGGTGGCATTTAGTA	24	True	NA	-5	True	AATAAA	-18	NA	179345430	179150887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179151201_179152141_179152256_179153490_179153624_179154048_179154193_179154813_179154920_179158722_179158880_179181071_179181156_179207512_179207716_179272910_179273065_179343766_179344162_179345189
transcript_153466.known	chr5	+	2636	18	FSM	ENSG00000176783.15	ENST00000319449.9	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	39.2638136051954	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	-3	True	NA	15	True	AATAAA	-16	NA	179550553	179610012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_153468.known	chr5	+	2454	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	62.3995386372794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	9135	False	NA	15	True	AATAAA	-16	NA	179559691	179610012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_153472.nic	chr5	+	2580	17	NIC	ENSG00000176783.15	novel	2636	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	70.5044047826092	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	209	False	NA	15	True	AATAAA	-16	NA	179550543	179610012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_15348.known	chr1	+	2191	4	FSM	ENSG00000163472.19	ENST00000295694.9	2191	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	17	False	NA	13	True	AATAAA	-13	NA	156282947	156292443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156283066_156285183_156285984_156286259_156286474_156291384
transcript_153485.nic	chr5	+	2223	5	ISM	ENSG00000176783.15	ENST00000393448.6	2320	16	-292	31777	-10	1412	5prime_fragment	TRUE	canonical	3	201	junction_1	18.7666592658363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGATTGTCTTTGCATGT	209	False	NA	NA	False	TTTAAA	-11	NA	179550543	179570794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301
transcript_153489.known	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_13	94.2513949169294	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	882	False	NA	-3	True	AATAAA	-21	NA	179623710	179614177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_15349.nic	chr1	-	1122	4	NIC	ENSG00000198715.13	novel	1365	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	180.577468755718	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	NA	False	NA	-4	True	AATAGA	-21	NA	156295704	156292686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156293210_156294017_156294237_156294364_156294566_156295525
transcript_153490.known	chr5	-	2248	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_13	96.6853617234669	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	871	False	NA	-4	True	AATAAA	-20	NA	179623721	179614178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_153492.nic	chr5	-	2172	14	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	3	46	junction_3	144.755701158025	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-5	True	NA	-3	True	AATAAA	-21	NA	179623674	179614177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_153501.nic	chr5	-	2213	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	128.381890164549	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	0	True	NA	-6	True	AATAAA	-18	NA	179623697	179614180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_153502.nic	chr5	-	2146	13	NIC	ENSG00000169045.17	novel	2248	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	130.024036239458	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-2	True	NA	-6	True	AATAAA	-18	NA	179623671	179614180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_153508.known	chr5	-	2114	12	FSM	ENSG00000169045.17	ENST00000329433.10	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	113.561357063844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	1424	False	NA	-6	True	AATAAA	-18	NA	179623168	179614180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
transcript_153510.known	chr5	+	4915	15	FSM	ENSG00000127022.16	ENST00000247461.9	4915	15	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_13	285.415388298443	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	-13	True	NA	17	True	AATAAA	-23	NA	179698966	179731641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_153515.known	chr5	+	4207	15	FSM	ENSG00000127022.16	ENST00000452673.6	4207	15	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	900.528767571858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGACTGAATTTCTT	506	False	NA	33	True	ATTAAA	-18	NA	179698905	179730925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_153523.nic	chr5	+	627	4	ISM	ENSG00000213316.10	ENST00000505170.5	582	5	1483	-66	-87	0	3prime_fragment	FALSE	canonical	3	14	junction_1	5.31245915016974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCGGGCTGCGTTCTCTG	1420	False	NA	15	True	ATTAAA	-15	NA	179795467	179796510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_179795684_179795785_179795857_179795940_179796023_179796252
transcript_153525.known	chr5	+	507	3	FSM	ENSG00000213316.10	ENST00000509898.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCGTGGGCCTGAG	40	False	NA	NA	False	NA	NA	NA	179795554	179796375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179795857_179795940_179796023_179796252
transcript_153526.known	chr5	-	5173	22	FSM	ENSG00000197226.13	ENST00000356834.7	5173	22	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	69.5198629016807	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAAATGTGGTCTGTCT	6	True	NA	-26	True	AATAAA	-26	NA	179907859	179862065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867444_179867496_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_153531.known	chr5	-	5155	21	FSM	ENSG00000197226.13	ENST00000355235.8	5155	21	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_11	23.0618190956394	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGTAAATGTGGTC	-32	True	NA	-31	True	AATAAA	-21	NA	179907897	179862070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_15355.known	chr1	-	943	3	FSM	ENSG00000198715.13	ENST00000484214.1	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTCTTTACCCTCCC	23	True	NA	NA	False	NA	NA	NA	156295647	156293616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156294237_156294364_156294566_156295525
transcript_153557.known	chr5	-	3027	14	FSM	ENSG00000161013.17	ENST00000337755.9	3027	14	0	0	0	0	multi-exon	FALSE	canonical	1	109	junction_11	69.9102552347097	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCGCCCTGGGCATCT	4988	False	NA	-34	True	AATAAA	-26	NA	179802998	179797596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179798069_179798164_179798278_179798346_179798435_179798512_179798592_179798927_179799122_179799202_179799311_179799505_179799637_179799953_179800069_179800183_179800260_179800483_179800598_179800906_179800954_179801333_179801468_179801553_179801695_179801783
transcript_153567.nnic	chr5	+	2110	9	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-421	0	at_least_one_novel_splicesite	TRUE	canonical	1	165	junction_1	165.464828211315	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	500	False	NA	23	True	ATTAAA	-23	NA	179806902	179837255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_179807124_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_15357.known	chr1	-	524	2	FSM	ENSG00000198715.13	ENST00000480968.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATTTTTTTGTATTTT	-1	True	NA	NA	False	NA	NA	NA	156291506	156290686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156291107_156291402
transcript_153572.known	chr5	-	2879	9	FSM	ENSG00000161010.16	ENST00000522663.5	2879	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	59.4280026586794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTGTCTGGGATGTGAG	0	True	NA	NA	False	NA	NA	NA	179858860	179835132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
transcript_153578.known	chr5	-	1244	8	FSM	ENSG00000161010.16	ENST00000518235.5	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	43.568852382857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAAGAGGGGCACGCA	9	True	NA	NA	False	NA	NA	NA	179858806	179836633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_15358.known	chr1	-	543	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGCTGCAGTGTGTT	4120	False	NA	-12	True	TATAAA	-17	NA	156291550	156290095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156290361_156290976_156291107_156291402
transcript_153587.known	chr5	-	1168	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	28.7851234726088	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-2	True	NA	-13	True	AATAAA	-15	NA	179858817	179837275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_15359.known	chr1	-	2048	15	FSM	ENSG00000163468.15	ENST00000368262.7	2048	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1174.72006435229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCATTTAGTTTGCTT	21	True	NA	-67	True	NA	NA	NA	156338247	156309013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337078_156337241_156338153
transcript_1536.known	chr1	-	937	6	FSM	ENSG00000008130.15	ENST00000492845.6	937	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	215.674384199886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGAAACGACCTCGCC	9263	False	NA	NA	False	NA	NA	NA	1779962	1756003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_15360.known	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	1172.64908760168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	11	True	NA	NA	False	NA	NA	NA	156338257	156309164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
transcript_153602.known	chr5	-	902	6	FSM	ENSG00000161010.16	ENST00000520698.5	902	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	65.5145785302783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCACCCAGGAAACATCAG	18	True	NA	NA	False	NA	NA	NA	179858797	179836801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
transcript_153603.known	chr5	-	1096	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	59.4521656460049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-19	True	NA	-13	True	AATAAA	-15	NA	179858834	179837275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
transcript_153604.known	chr5	-	868	6	FSM	ENSG00000161010.16	ENST00000521299.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	57.7408001330082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGGGAAGACCTCATGGG	16	False	179858860	NA	False	NA	NA	NA	179858844	179837526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179847977_179848067_179853377_179853438_179858730
transcript_153614.known	chr5	-	4145	6	FSM	ENSG00000161010.16	ENST00000518219.5	4145	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	21.2790977252326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	7	True	NA	-13	True	AATAAA	-15	NA	179858808	179837275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_153616.known	chr5	-	1004	5	FSM	ENSG00000161010.16	ENST00000376931.6	1004	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	66.7883784800919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	7	True	NA	-3	True	AATAAA	-25	NA	179858808	179837265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
transcript_153620.known	chr5	-	559	5	FSM	ENSG00000161010.16	ENST00000523737.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	65.00769185258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTCACAGTTGACGAA	16	False	179858860	NA	False	NA	NA	NA	179858844	179840808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
transcript_153622.known	chr5	-	1054	4	FSM	ENSG00000161010.16	ENST00000520150.5	1054	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	76.3558918631838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGCGCAGTGGCTCAC	14	False	NA	NA	False	TTTAAA	-15	NA	179858846	179840239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179840960_179841906_179842065_179853377_179853438_179858730
transcript_153623.known	chr5	+	921	3	FSM	ENSG00000161011.20	ENST00000506042.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTCTAACCAGGGG	-5	True	NA	111	True	AAAAAG	-17	NA	179806397	179813024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179806592_179811573_179811683_179812406
transcript_153629.known	chr5	+	1454	2	FSM	ENSG00000245317.2	ENST00000499601.2	1454	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTATTCAAATCTA	NA	False	NA	NA	False	AATAAA	-17	NA	179859012	179861283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179859213_179860029
transcript_153630.known	chr5	+	2840	8	FSM	ENSG00000161011.20	ENST00000389805.9	2840	8	0	0	0	0	multi-exon	FALSE	canonical	1	172	junction_6	133.370437014309	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTGCTAAATTGCATGA	0	True	NA	22	True	AATAAA	-22	NA	179820904	179838078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179821142_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_153631.known	chr5	-	1096	7	FSM	ENSG00000161013.17	ENST00000520969.5	1096	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	125.216701051506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACGTAAGTCCACATAT	8350	False	NA	13	True	NA	NA	NA	179799636	179797670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179798069_179798164_179798278_179798346_179798435_179798512_179798577_179798927_179799122_179799202_179799311_179799505
transcript_153638.known	chr5	-	1904	9	FSM	ENSG00000113269.14	ENST00000521389.6	1904	9	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_1	57.0920309675527	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGAGTGTCAAAATGAT	-16	True	NA	NA	False	AATAAA	-16	NA	180071759	179955066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179955670_179963470_179963565_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_153640.known	chr5	-	1766	8	FSM	ENSG00000113269.14	ENST00000261947.4	1766	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	282.816880251342	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGAGGGCTG	-6	True	NA	-1	True	AATAAA	-42	NA	180072101	179955452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179955670_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_153643.nic	chr5	-	1545	6	NIC	ENSG00000113269.14	novel	697	2	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	350.364952585158	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGCTACTGGTCTTAT	9032	False	NA	-4	True	AATAAA	-22	NA	180071787	179976773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_179977386_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_153648.known	chr5	-	4326	12	FSM	ENSG00000050748.18	ENST00000393360.7	4326	12	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	74.3154989785425	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGCATGTCCAATTTT	17	True	NA	-14	True	GATAAA	-1	NA	180292056	180233593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180236532_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
transcript_153649.known	chr5	-	2266	7	FSM	ENSG00000050748.18	ENST00000425491.6	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_5	15.4164414397962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAACATTAATGTCAG	675	False	NA	NA	False	ATTAAA	-13	NA	180291967	180246027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
transcript_15365.known	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3026	junction_10	209.514400516214	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-24	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_153650.known	chr5	+	393	2	FSM	ENSG00000248367.2	ENST00000504573.2	465	2	69	3	69	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTATTC	44	False	NA	NA	False	AATAAA	-18	NA	180293244	180295253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180293419_180295034
transcript_153652.known	chr5	-	3034	19	FSM	ENSG00000131459.13	ENST00000253778.13	3034	19	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_9	110.06053328807	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-9	True	NA	-29	True	AATAAA	-15	NA	180353336	180300697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_153671.nic	chr5	-	2623	13	ISM	ENSG00000131459.13	ENST00000253778.13	3034	19	-60	14472	-60	1594	5prime_fragment	FALSE	canonical	1	226	junction_3	127.16030455907	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGACCACGGTGTTACT	NA	False	NA	NA	False	AAAAAG	-12	NA	180353396	180315169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_153674.nnic	chr5	-	2504	12	NIC	ENSG00000131459.13	novel	3034	19	NA	NA	-3	1594	combination_of_known_splicesites	FALSE	canonical	1	23	junction_6	213.782580524086	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGACCACGGTGTTACT	-12	True	NA	NA	False	AAAAAG	-12	NA	180353339	180315169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_153684.known	chr5	-	601	5	FSM	ENSG00000131459.13	ENST00000518158.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_2	12.871965661856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTGTGGGAACTGAG	-9	True	NA	NA	False	NA	NA	NA	180353336	180331411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_153687.known	chr5	+	6219	12	FSM	ENSG00000113300.13	ENST00000261951.9	6219	12	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_10	33.1086366101327	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTGGGGTTATAAT	-5	True	NA	18	True	AATAAA	-23	NA	180494378	180578358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
transcript_153692.known	chr5	-	478	3	FSM	ENSG00000161055.4	ENST00000292641.4	478	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGAGCCTGGTATTTTCT	-2	True	NA	NA	False	AATAAA	-15	NA	180591499	180590104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180590255_180590599_180590839_180591410
transcript_153694.known	chr5	-	5833	30	FSM	ENSG00000037280.16	ENST00000261937.11	5833	30	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_27	15.7857986419242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGTTGCTTTTATTG	-8	True	NA	-12	True	AATAAA	-31	NA	180649600	180601505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180603391_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020_180619110_180619252_180619367_180619664_180619770_180620172_180620309_180620608_180620716_180620875_180621008_180621105_180621253_180621541_180621905_180622730_180622840_180623934_180624062_180625868_180626032_180626110_180626266_180628881_180629000_180629258_180629428_180629695_180629836_180629942_180630106_180630224_180630338_180630554_180630800_180631681_180631779_180649487
transcript_153695.known	chr5	-	4292	30	FSM	ENSG00000037280.16	ENST00000393347.7	4292	30	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_27	15.7839154119398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGTGCCTTCCCAGACA	-1	True	NA	NA	False	NA	NA	NA	180649624	180607964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180608285_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020_180619110_180619252_180619367_180619664_180619770_180620172_180620309_180620608_180620716_180620875_180621008_180621105_180621253_180621541_180621905_180622730_180622840_180623934_180624062_180625868_180626032_180626110_180626266_180628881_180629000_180629258_180629428_180629695_180629836_180629942_180630106_180630224_180630338_180630554_180630800_180631681_180631779_180649487
transcript_153702.known	chr5	-	540	4	FSM	ENSG00000131446.17	ENST00000504385.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.58653778449403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCCTAGGACTGCGGG	-5	True	NA	NA	False	NA	NA	NA	180809850	180793061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180808501_180808598_180808885_180809077_180809633
transcript_153705.nnic	chr5	-	2892	4	NNC	ENSG00000131446.17	novel	3077	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	94.8788701450434	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	5700	False	NA	-9	True	AATAAA	-15	NA	180810151	180790547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_180793098_180808647_180808811_180809009_180809077_180810039
transcript_153712.known	chr5	-	572	3	FSM	ENSG00000131446.17	ENST00000507384.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCCACCCTCAGTCAG	7	True	NA	NA	False	NA	NA	NA	180802803	180792869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180795655_180795876_180802679
transcript_153718.known	chr5	-	3175	3	FSM	ENSG00000131446.17	ENST00000446023.6	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	105.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	16	True	NA	-9	True	AATAAA	-15	NA	180809829	180790547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180808647_180809077_180809633
transcript_153719.known	chr5	-	1104	3	FSM	ENSG00000131446.17	ENST00000506889.1	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	37.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGCAGCGCGGTCACGC	-12	True	NA	NA	False	NA	NA	NA	180810127	180792510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180808647_180809077_180810039
transcript_15372.known	chr1	-	1815	12	FSM	ENSG00000163468.15	ENST00000368259.6	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	955.14318947302	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	23	True	NA	-22	True	ATTAAA	-14	NA	156338245	156308968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156335826_156335889_156338153
transcript_153721.known	chr5	-	8445	2	FSM	ENSG00000131446.17	ENST00000307826.5	8445	2	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	0	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCCCAGATTAACTAT	4	True	NA	NA	False	AATAAA	-26	NA	180802806	180784779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180802679
transcript_153722.known	chr5	-	1919	2	FSM	ENSG00000131446.17	ENST00000427865.2	1919	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGATTATTCTCCCGT	6600	False	NA	NA	False	NA	NA	NA	180803904	180791481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180803601
transcript_153723.known	chr5	-	534	2	FSM	ENSG00000131446.17	ENST00000505682.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCAATAACGTCTTTT	7737	False	NA	NA	False	NA	NA	NA	180802767	180795429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180795876_180802679
transcript_153726.known	chr5	+	984	1	FSM	ENSG00000280161.1	ENST00000624602.1	984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGGGATATATTATTG	135	False	NA	NA	False	AATACA	-16	NA	180810400	180811384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180810400_180811400
transcript_153727.nnic	chr5	-	1824	2	NNC	ENSG00000278970.3	novel	1141	3	NA	NA	-266	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGATTCTTATTTTCT	NA	False	NA	-7	True	AGTAAA	-15	NA	180831884	180829959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_180830604_180830704
transcript_153728.known	chr5	-	1652	1	FSM	ENSG00000278970.3	ENST00000623091.1	1652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTATTTTCTTTGGTA	4	True	NA	-1	True	AGTAAA	-21	NA	180831605	180829953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180830000_180831600
transcript_153729.known	chr5	+	1713	2	FSM	ENSG00000245060.8	ENST00000657229.1	1713	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	-32	True	NA	31	True	AATAAA	-38	NA	180831643	180835726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180831942_180834311
transcript_153738.known	chr5	-	749	2	FSM	ENSG00000196670.14	ENST00000504225.1	749	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCGTACAAGTGTGAG	679	False	NA	NA	False	NA	NA	NA	180860697	180850914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180851494_180860527
transcript_153739.known	chr5	-	3941	2	FSM	ENSG00000196670.14	ENST00000502412.2	3941	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-7	True	NA	-3	True	AATAAA	-20	NA	180861276	180847610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180851494_180861218
transcript_153742.known	chr5	-	2864	7	FSM	ENSG00000146054.18	ENST00000274773.12	2864	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTTGGCCCATTTTCT	-16	True	NA	NA	False	AATGAA	-20	NA	181205196	181193923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181195678_181198182_181198219_181198689_181198806_181199094_181199118_181199850_181200082_181203544_181203641_181204588
transcript_153743.known	chr5	+	2696	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	4.22335585688414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	-6	True	NA	18	True	AATAAA	-19	NA	181223289	181235808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
transcript_153747.known	chr5	+	3645	6	FSM	ENSG00000146063.20	ENST00000315073.10	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	3.97994974842648	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	-15	True	NA	18	True	AATAAA	-19	NA	181223280	181235808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173
transcript_153749.known	chr5	+	3834	5	FSM	ENSG00000146063.20	ENST00000508930.1	3834	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	4.38035386698381	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGGTCTGTTCCTTC	-6	True	NA	16	True	AATAAA	-17	NA	181223289	181235806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233764_181234173
transcript_153767.known	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	3590.95048528312	5399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	306	False	NA	-17	True	AATAAA	-24	NA	181243889	181236925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
transcript_153774.known	chr5	-	1651	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	8280	junction_1	807.155223953581	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTACAAATAAAAAAAAAAC	248	False	NA	-1	True	NA	NA	NA	181243947	181236960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
transcript_153798.known	chr5	+	1046	3	FSM	ENSG00000233937.8	ENST00000506340.3	1061	3	14	1	0	-1	multi-exon	FALSE	canonical	3	19	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTTGTACTGTTAACT	-15	True	NA	7	True	AATAAA	-16	NA	181246506	181257585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181246883_181247115_181247387_181257186
transcript_15380.known	chr1	-	827	2	FSM	ENSG00000163468.15	ENST00000489870.1	827	2	0	0	0	0	multi-exon	FALSE	canonical	3	3543	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCACTTGGGCCCAGGG	5	True	NA	NA	False	NA	NA	NA	156338206	156335114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156335889_156338153
transcript_153803.known	chr5	-	590	3	FSM	ENSG00000204628.12	ENST00000507261.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5240.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTGGCGACAGTC	4	True	NA	NA	False	NA	NA	NA	181243902	181241436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181241640_181242169_181242346_181243691
transcript_153804.known	chr5	+	886	2	FSM	ENSG00000233937.8	ENST00000505151.6	1280	2	394	0	378	0	multi-exon	FALSE	canonical	3	51	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTGTACTGTTAACTA	379	False	NA	8	True	AATAAA	-17	NA	181246900	181257586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181247387_181257186
transcript_153805.known	chr5	+	807	2	FSM	ENSG00000248275.3	ENST00000514146.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGCTGGGTGCGGTGGC	14	True	NA	NA	False	AAAAAG	-3	NA	181261211	181264261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181261385_181263627
transcript_153808.known	chr5	-	633	2	FSM	ENSG00000183718.6	ENST00000688015.1	2856	2	886	1337	-63	-97	multi-exon	FALSE	canonical	3	9	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAATGACATGAAC	1724	False	NA	NA	False	AAAACA	-20	NA	181260257	181256483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181256860_181260000
transcript_15381.known	chr1	+	512	4	FSM	ENSG00000163467.12	ENST00000368253.6	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	-26	True	NA	NA	False	AGTAAA	-12	NA	156338502	156346990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156338606_156339734_156339792_156344579_156344709_156346767
transcript_153810.known	chr5	-	1150	8	FSM	ENSG00000204628.12	ENST00000511473.5	1150	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4354.92945185249	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCAAAAAAGCTCCATT	-10	True	NA	0	True	AATAAA	-41	NA	181243916	181236908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243679
transcript_153811.known	chr5	-	1208	9	FSM	ENSG00000204628.12	ENST00000508682.5	1208	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4810.38724402724	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	4	True	NA	23	True	AATAAA	-13	NA	181243902	181236936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240328_181241491_181241640_181242173_181242346_181243691
transcript_153812.known	chr5	+	529	3	FSM	ENSG00000248275.3	ENST00000509252.2	864	3	11	324	2	-4	multi-exon	FALSE	canonical	3	6	junction_2	80.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTGGCTGGGTGCGG	26	True	NA	NA	False	NA	NA	NA	181261223	181264257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181261385_181263627_181263790_181264051
transcript_153813.known	chr5	-	825	6	FSM	ENSG00000204628.12	ENST00000511566.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5052.18647320148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTTAGGTTTTTTT	315	False	NA	-25	True	AATAAA	-16	NA	181243880	181236933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_153814.known	chr5	-	388	3	FSM	ENSG00000204628.12	ENST00000504726.1	388	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4140	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTCTGACTTTTAGG	15	True	NA	19	True	AATAAA	-9	NA	181243891	181236940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237695_181243691
transcript_153815.known	chr5	+	672	3	FSM	ENSG00000248275.3	ENST00000507434.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGTCAGTAAATGT	24	True	NA	NA	False	AATAAA	-19	NA	181261221	181272307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181261385_181271572_181271690_181271915
transcript_153816.known	chr6	+	1485	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	56.1753813461712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	9	True	NA	16	True	AATAAA	-22	NA	292096	351355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
transcript_153818.known	chr6	+	3075	7	FSM	ENSG00000112679.15	ENST00000419235.7	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	50.4559764106845	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	-11	True	NA	16	True	AATAAA	-22	NA	292486	351355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768
transcript_15382.known	chr1	-	1885	13	FSM	ENSG00000163468.15	ENST00000368258.7	1885	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	926.393260026336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	5	True	NA	-22	True	ATTAAA	-14	NA	156338263	156308968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156338153
transcript_153820.known	chr6	+	587	7	FSM	ENSG00000112679.15	ENST00000603726.5	587	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	52.562396782829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTAGTGATTTGTAA	42	False	NA	NA	False	AAAAAG	-22	NA	292539	350950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768_348842_350821
transcript_153821.known	chr6	+	1166	6	FSM	ENSG00000112679.15	ENST00000603795.5	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	38.2601620487943	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGAGCAGTCTGTGCC	-36	True	NA	NA	False	NA	NA	NA	292461	349471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768
transcript_153825.known	chr6	+	867	4	FSM	ENSG00000112679.15	ENST00000605315.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.7462885681221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCCAGGCCCCTGCA	-17	True	NA	NA	False	NA	NA	NA	292274	349102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_345853_345929_348102_348275_348768
transcript_153828.nnic	chr6	-	4519	29	NIC	ENSG00000112685.14	novel	4456	28	NA	NA	11	0	combination_of_known_splicesites	TRUE	canonical	2	44	junction_27	132.149164907366	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-16	True	NA	-22	True	AATAAA	-15	NA	693128	485153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_689138_689213_693018
transcript_153829.nnic	chr6	-	3310	29	NNC	ENSG00000112685.14	novel	4456	28	NA	NA	-30	-946	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	107.783300171772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGGTCCAGGTGTC	-2	True	NA	-3	True	ATTAAA	-24	NA	693169	486099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_486404_486633_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_153831.nnic	chr6	-	3571	29	NIC	ENSG00000112685.14	novel	4456	28	NA	NA	11	-948	combination_of_known_splicesites	FALSE	canonical	2	44	junction_27	132.149164907366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTGTGGTCCAGGTG	-16	True	NA	-5	True	ATTAAA	-22	NA	693128	486101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_689138_689213_693018
transcript_153832.known	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	FALSE	canonical	2	371	junction_17	59.4526474090988	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-27	True	NA	-22	True	AATAAA	-15	NA	693139	485153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_153846.known	chr6	-	1665	11	FSM	ENSG00000112699.11	ENST00000380815.5	1665	11	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	25.0511476783001	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGTCAGTGTGGAT	-17	True	NA	-10	True	ATTAAA	-24	NA	2245605	1623805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_1624232_1624471_1624541_1726415_1726513_1742467_1742587_1930102_1930231_1959866_1959972_1960773_1960967_2115770_2115881_2117468_2117557_2124686_2124732_2245320
transcript_153849.known	chr6	-	2450	3	FSM	ENSG00000164385.10	ENST00000624527.3	2450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGAGTTTTTGGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	2634619	2621912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2624120_2633604_2633793_2634564
transcript_15385.known	chr1	+	1862	11	FSM	ENSG00000132677.13	ENST00000612897.4	1862	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.94788059459674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	0	True	NA	9	True	GATAAA	-16	NA	156369211	156385219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156369437_156371181_156371255_156377300_156377488_156377989_156378141_156378251_156378400_156381346_156381514_156381805_156381944_156382067_156382202_156382747_156382870_156384526_156384601_156384776
transcript_153851.known	chr6	+	3239	7	FSM	ENSG00000124535.16	ENST00000380769.8	3239	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	25.071010261965	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGCGATCTCGGCTCA	366	False	NA	NA	False	NA	NA	NA	2766051	2786952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2766445_2768690_2768883_2770119_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
transcript_153852.known	chr6	+	2595	7	FSM	ENSG00000124535.16	ENST00000380771.8	2595	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	109.964640781581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGATTCTGTCATGGT	-49	True	NA	14	True	AATAAA	-15	NA	2765413	2785745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2766445_2768690_2768883_2770194_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
transcript_153854.known	chr6	-	2476	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_5	9.91071249821234	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCAGGCCTCTTC	-1	True	NA	-1	True	AATAAA	-24	NA	2841863	2832331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
transcript_15386.known	chr1	+	1912	11	FSM	ENSG00000132677.13	ENST00000613460.4	1912	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.94788059459674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	0	True	NA	9	True	GATAAA	-16	NA	156369211	156385219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156369437_156374606_156374730_156377300_156377488_156377989_156378141_156378251_156378400_156381346_156381514_156381805_156381944_156382067_156382202_156382747_156382870_156384526_156384601_156384776
transcript_153867.known	chr6	-	4143	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_3	151.891865775916	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTAGATTTTCCCTT	0	True	NA	-7	True	AATAAA	-24	NA	2903309	2887269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_153877.known	chr6	-	1495	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	165.58826112446	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	19	True	NA	-10	True	AATAAA	-28	NA	2962108	2948158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
transcript_153879.known	chr6	-	1370	7	FSM	ENSG00000124570.21	ENST00000380529.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	2	133	junction_6	127.133023072511	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	1038	False	NA	-10	True	AATAAA	-28	NA	2971206	2948158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971116
transcript_153880.known	chr6	-	1638	7	FSM	ENSG00000124570.21	ENST00000643098.1	1638	7	0	0	0	0	multi-exon	FALSE	canonical	2	106	junction_6	136.435169789741	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-3	True	NA	-10	True	AATAAA	-28	NA	2971605	2948158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971247
transcript_153881.known	chr6	-	1375	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_6	154.266454191729	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	659	False	NA	-10	True	AATAAA	-28	NA	2971585	2948158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
transcript_153882.known	chr6	-	1315	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	0	0	0	0	multi-exon	FALSE	canonical	2	114	junction_6	133.667497919277	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	1	True	NA	-10	True	AATAAA	-28	NA	2971567	2948158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
transcript_153890.known	chr6	+	1508	10	FSM	ENSG00000124588.22	ENST00000338130.7	1508	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	530.276401255416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	3	True	NA	15	True	AATAAA	-16	NA	2999973	3019755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3000086_3002049_3002287_3003668_3003790_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_153898.nic	chr6	+	1970	9	NIC	ENSG00000124588.22	novel	1508	10	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	514.92619313354	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	-29	True	NA	15	True	AATAAA	-16	NA	2999824	3019755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_3000086_3002049_3002287_3003668_3004260_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_15390.nnic	chr1	+	1033	4	NIC	ENSG00000132677.13	novel	1927	9	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	NA	False	NA	9	True	GATAAA	-16	NA	156369155	156385219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156369437_156382747_156382870_156384413_156384601_156384776
transcript_153921.known	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	106.564534438058	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	0	True	NA	15	True	AATAAA	-16	NA	2999893	3019755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_15393.known	chr1	-	542	3	FSM	ENSG00000125462.19	ENST00000497822.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCATCCCAGTTTATCC	9	True	NA	-112	True	NA	NA	NA	156421758	156404363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156404602_156414653_156414754_156421554
transcript_153934.known	chr6	+	851	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_4	352.902026063892	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	12	False	NA	15	True	AATAAA	-16	NA	3000001	3019755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_15394.known	chr1	-	780	3	FSM	ENSG00000125462.19	ENST00000663987.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTATCTGTTTACATT	720	False	NA	NA	False	AATAAA	-18	NA	156456631	156446166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156446574_156455627_156455722_156456352
transcript_153947.known	chr6	+	1573	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	4	True	NA	23	True	AATAAA	-23	NA	2988647	2991173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2988710_2989527_2989734_2989868
transcript_15395.known	chr1	-	543	2	FSM	ENSG00000125462.19	ENST00000465270.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGTGGTAGTGGATA	8506	False	NA	-5	True	AATAAA	-22	NA	156421752	156404256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156404602_156421554
transcript_153953.known	chr6	-	408	2	FSM	ENSG00000224846.3	ENST00000429319.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGCTCTCACAAGCT	36	False	NA	-15	True	ATTAAA	-19	NA	2999134	2989725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2990012_2999012
transcript_153955.known	chr6	+	2811	2	FSM	ENSG00000244041.7	ENST00000445000.2	2811	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	0	True	NA	23	True	AATAAA	-23	NA	2987966	2991173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2988032_2988427
transcript_153957.nic	chr6	+	4203	11	NIC	ENSG00000137275.16	novel	4454	13	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	18.9198308660516	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	NA	False	NA	13	True	AATAAA	-15	NA	3063780	3115187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_3064060_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
transcript_153959.known	chr6	+	4092	11	FSM	ENSG00000137275.16	ENST00000259808.9	4092	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	16.5798069952578	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	-31	True	NA	13	True	AATAAA	-15	NA	3068493	3115187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3068662_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
transcript_15396.known	chr1	-	473	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGTAGTGGATATACCT	3	True	NA	0	True	AATAAA	-27	NA	156429423	156404251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156404602_156426797_156426873_156429375
transcript_153961.known	chr6	+	3947	10	FSM	ENSG00000137275.16	ENST00000380409.3	3947	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	41.1582312545134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAACACTTTTTAAAAT	NA	False	NA	-24	True	NA	NA	NA	3063861	3115150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3064060_3076763_3076988_3077778_3077936_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
transcript_153963.known	chr6	-	850	1	FSM	ENSG00000272277.1	ENST00000606441.1	850	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGGCGCGGTTGTTCA	22	False	NA	-8	True	AATAAA	-15	NA	3068894	3068044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3068000_3068900
transcript_153965.known	chr6	+	1909	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	26.4428104070317	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	-8	True	NA	NA	False	AATAAA	-3	NA	3118710	3153578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_153967.known	chr6	-	1616	4	FSM	ENSG00000137267.7	ENST00000333628.4	1616	4	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_2	26.5371856499935	2479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-1	True	NA	-5	True	AATAAA	-18	NA	3157544	3153665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3157406
transcript_153968.known	chr6	-	817	4	FSM	ENSG00000137267.7	ENST00000489942.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	639.602133274185	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATCTGCTTCCGCACC	17	False	NA	NA	False	AAAACA	-37	NA	3157526	3154578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3155056_3155624_3155736_3156043_3156153_3157406
transcript_153969.known	chr6	-	2284	3	FSM	ENSG00000137267.7	ENST00000680036.1	2284	3	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTATACTAATAAAAAAG	-1	True	NA	-38	True	NA	NA	NA	3157544	3153698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3155736_3156043_3156153_3157406
transcript_15397.known	chr1	-	5912	12	FSM	ENSG00000116604.19	ENST00000348159.9	5912	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	43.1294419199991	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCGTGGGTTTTGGTT	32	True	NA	-5	True	ATTAAA	-26	NA	156500775	156463726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156467657_156467992_156468300_156468779_156469021_156475107_156475238_156476493_156476515_156477011_156477203_156479289_156479347_156479585_156479797_156480833_156480972_156482436_156482641_156483238_156483431_156500485
transcript_153970.known	chr6	-	2592	2	FSM	ENSG00000137267.7	ENST00000680967.1	2592	2	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTATACTAATAAAAAAG	-1	True	NA	-38	True	NA	NA	NA	3157544	3153698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3156153_3157406
transcript_153971.known	chr6	+	629	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	276.058367419324	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	-11	True	NA	15	True	AATAAA	-15	NA	3258951	3267781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
transcript_153973.known	chr6	-	1922	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	2236	junction_3	65.5591336123351	2216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTACTTGAAAGCACAGT	-2	True	NA	-18	True	AATAAA	-16	NA	3227653	3224276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
transcript_153974.known	chr6	-	1923	4	FSM	ENSG00000137285.11	ENST00000473006.1	1923	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1106.41774308903	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTCTACTTGAAAG	8	False	NA	-24	True	AATAAA	-10	NA	3231730	3224282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3231556
transcript_153979.known	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	44.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	-16	True	NA	NA	False	ATTAAA	-17	NA	3258946	3268049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3263683_3263760_3267590
transcript_153981.known	chr6	-	3070	3	FSM	ENSG00000137285.11	ENST00000681757.1	3070	3	0	0	0	0	multi-exon	FALSE	canonical	3	2236	junction_2	79.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGCTAGTTTCTCA	4181	False	NA	NA	False	GATAAA	-36	NA	3227557	3223323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3225812_3226158_3226670_3227486
transcript_153983.known	chr6	+	4603	2	FSM	ENSG00000180822.12	ENST00000473000.2	4603	2	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGATTTGTGTGTGCATT	-2	True	NA	NA	False	ATTAAA	-18	NA	3258960	3268050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3263683
transcript_153986.known	chr6	+	489	2	FSM	ENSG00000180822.12	ENST00000380305.4	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTCATCAGGCCGCG	-2	True	NA	13	True	AATAAA	-13	NA	3258896	3267779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3267590
transcript_153987.known	chr6	-	1765	2	FSM	ENSG00000228793.3	ENST00000666680.2	1766	2	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGCCTTGTGTTAT	2989	False	NA	NA	False	ATTAAA	-35	NA	3720081	3593489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3594536_3719362
transcript_153992.known	chr6	-	1878	5	FSM	ENSG00000168994.14	ENST00000380283.5	1878	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	1.78535710713571	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATCTGTCCAGGATGT	-2	True	NA	-17	True	AATAAA	-14	NA	3751713	3722618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3723737_3727550_3727663_3737078_3737197_3738056_3738149_3751275
transcript_153993.known	chr6	+	1643	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	-1	True	NA	8	True	AATAAA	-18	NA	3849372	3851317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3849487_3849788
transcript_153995.known	chr6	+	1935	1	FSM	ENSG00000145945.7	ENST00000380274.2	1935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGGTTAATTTATTT	12	True	NA	11	True	AATAAA	-21	NA	3849385	3851320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3849400_3851300
transcript_153996.known	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	28.8008644994967	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	-7	True	NA	15	True	AATAAA	-19	NA	4021299	4064983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
transcript_153998.nnic	chr6	-	1621	11	NNC	ENSG00000198721.13	novel	1368	10	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_10	279.135827152302	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	12	False	NA	-18	True	AATAAA	-17	NA	4135614	4115705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4134312_4134527_4135510
transcript_153999.known	chr6	-	1380	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_9	131.889216511809	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-1	True	NA	-18	True	AATAAA	-17	NA	4135597	4115705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_1540.known	chr1	-	3145	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	0	0	0	multi-exon	TRUE	canonical	3	386	junction_10	664.31655857731	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-23	True	NA	-3	True	AATAAA	-20	NA	1891117	1785284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
transcript_154000.known	chr6	-	1368	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_9	109.592285932006	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-11	True	NA	-18	True	AATAAA	-17	NA	4135575	4115705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_154004.nnic	chr6	-	1326	9	NIC	ENSG00000198721.13	novel	1380	10	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	233.336633161191	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-7	True	NA	-18	True	AATAAA	-17	NA	4135633	4115705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_154005.nnic	chr6	-	1336	9	NIC	ENSG00000198721.13	novel	1368	10	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	222.885620891075	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-7	True	NA	-18	True	AATAAA	-17	NA	4135633	4115705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_154008.known	chr6	-	558	4	FSM	ENSG00000198721.13	ENST00000489086.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	210.02275009045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACAAAAGCTGTAGAG	-9	True	NA	NA	False	NA	NA	NA	4135573	4130317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4130561_4130766_4130866_4133548_4133702_4135510
transcript_154009.nic	chr6	-	558	4	ISM	ENSG00000198721.13	ENST00000380118.8	1368	10	-58	14682	-36	-70	5prime_fragment	FALSE	canonical	3	391	junction_3	174.120647827878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCATAAACACTGAGGTAA	-7	True	NA	NA	False	AAAAAG	-6	NA	4135633	4130387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_4130561_4130766_4130866_4133548_4133712_4135510
transcript_15401.known	chr1	-	6013	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_19	6.87677196767481	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-11	True	NA	-4	True	AATAAA	-18	NA	156572565	156525404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
transcript_154010.nic	chr6	+	327	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-31	33328	-31	-12572	5prime_fragment	FALSE	canonical	3	359	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCATAAACACAGAAGTA	-1	True	NA	72	True	NA	NA	NA	4021235	4031654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_4021467_4031558
transcript_154011.nic	chr6	+	521	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-119	33222	-119	-12466	5prime_fragment	FALSE	canonical	3	359	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTATTGATGCTTCTGA	NA	False	NA	NA	False	CATAAA	-34	NA	4021147	4031760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_4021467_4031558
transcript_154012.nic	chr6	+	718	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-13	32919	-13	-12163	5prime_fragment	FALSE	canonical	3	359	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAGTAAAAGCAGATCCAA	17	False	NA	NA	False	AATAAA	-16	NA	4021253	4032063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_4021467_4031558
transcript_154015.known	chr6	-	1133	8	FSM	ENSG00000198721.13	ENST00000478266.6	1133	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	261.49835134299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	0	True	NA	-18	True	AATAAA	-17	NA	4135564	4115705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_154017.nic	chr6	+	2048	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-30	-118	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTCCAAACGTCATT	NA	False	NA	25	True	AATAAA	-13	NA	4772940	4954255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_154018.nic	chr6	+	2877	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-30	-460	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACCTTATATTCAACA	NA	False	NA	NA	False	ATTAAA	-28	NA	4772940	4955084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_154019.nic	chr6	+	3337	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	NA	False	NA	18	True	AATAAA	-20	NA	4772940	4955544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_154021.known	chr6	+	3503	7	FSM	ENSG00000153046.18	ENST00000397588.8	3503	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	87.3606827405149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	6	True	NA	18	True	AATAAA	-20	NA	4776403	4955544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_4776808_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_154025.known	chr6	+	773	2	FSM	ENSG00000153046.18	ENST00000483019.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACAGGCTTAGCTG	11	False	NA	-32	True	NA	NA	NA	4773040	4892347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_4773179_4891712
transcript_154027.known	chr6	-	1042	8	FSM	ENSG00000124787.14	ENST00000464646.1	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	78.171449456973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAAATCG	372	False	NA	-37	True	NA	NA	NA	5003658	4995077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003585
transcript_154028.known	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	36.4876272012241	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-7	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_154029.known	chr6	-	1088	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	78.1039193781095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	-6	True	NA	-6	True	AATAAA	-24	NA	5004036	4995046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
transcript_154031.known	chr6	-	1056	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	79.2520592091391	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACGCTTGCTTTCAG	NA	False	NA	-8	True	AATAAA	-22	NA	5004063	4995048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_154034.known	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	33.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-10	True	NA	-13	True	AATAAA	-22	NA	5260950	5108418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_5109492_5216617_5216739_5260647
transcript_154036.known	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	2	True	NA	-1	True	AATAAA	-17	NA	5260737	5186599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_5186981_5216617_5216739_5260647
transcript_154037.nic	chr6	-	2002	2	ISM	ENSG00000214113.11	ENST00000500576.4	592	3	-213	28440	0	21244	5prime_fragment	FALSE	canonical	3	717	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAACTGGCCCTCATCT	-10	True	NA	NA	False	NA	NA	NA	5260950	5215039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_5216739_5260647
transcript_154040.known	chr6	+	1692	7	FSM	ENSG00000145982.13	ENST00000324331.10	1692	7	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	37.6979958205856	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACCACTTCACTCAGGC	29	False	NA	NA	False	NA	NA	NA	5261043	5771429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_5261359_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_154041.known	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	13.8764388643324	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	-17	True	NA	19	True	AATAAA	-20	NA	5261512	5771583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_154047.known	chr6	+	411	3	FSM	ENSG00000233064.2	ENST00000454882.2	411	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTGTAATATTTCATT	NA	False	NA	NA	False	AATACA	-36	NA	5851505	5870220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_5851663_5852062_5852137_5870040
transcript_154048.known	chr6	-	3828	15	FSM	ENSG00000124491.16	ENST00000264870.8	3828	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.3956755211442	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATCTGTGCAGAAGTG	-1	True	NA	NA	False	AATAAA	-16	NA	6320662	6144083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_6145773_6151812_6151950_6167457_6167619_6174579_6174868_6181987_6182142_6195796_6195886_6197222_6197327_6222032_6222172_6224685_6224861_6248311_6248420_6250810_6250930_6266557_6266810_6305350_6305540_6318534_6318683_6320586
transcript_154050.known	chr6	-	1808	10	FSM	ENSG00000124783.14	ENST00000474597.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	347.56262425321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGAATCTCTTGCTG	-21	True	NA	NA	False	AATAAA	-22	NA	7313207	7268305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7269155_7289867_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_154052.known	chr6	-	3248	9	FSM	ENSG00000124783.14	ENST00000397511.6	3248	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.643800461007	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTATAGCTTCCTC	-12	True	NA	-11	True	CATAAA	-14	NA	7313198	7287569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_154053.known	chr6	-	9661	8	FSM	ENSG00000124783.14	ENST00000244763.9	9661	8	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_7	35.4550592227653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTGCAACATGAAATG	-13	True	NA	-31	True	ATTAAA	-17	NA	7313199	7281142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_154063.known	chr6	-	1118	8	FSM	ENSG00000124783.14	ENST00000479365.5	1118	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	260.878108999398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTTTTTTAAACC	4	True	NA	-58	True	NA	NA	NA	7313182	7289675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7289932_7295384_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_154069.known	chr6	+	2498	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	42.0520046341432	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	-21	True	NA	17	True	CATAAA	-17	NA	7389807	7418037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
transcript_154077.nic	chr6	+	2152	16	ISM	ENSG00000124784.9	ENST00000379834.7	2498	17	-361	3647	-346	2823	5prime_fragment	TRUE	canonical	3	275	junction_3	43.0169992238211	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAATGAAATACCTTC	NA	False	NA	NA	False	GATAAA	-4	NA	7389446	7414390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237
transcript_154082.nic	chr6	+	1617	15	ISM	ENSG00000124784.9	ENST00000379834.7	2498	17	-9	5125	6	1345	5prime_fragment	FALSE	canonical	3	275	junction_3	44.4042767750852	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGAAAGATTTGTCAGG	-30	True	NA	NA	False	NA	NA	NA	7389798	7412912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888
transcript_154087.nnic	chr6	-	961	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	-50	0	-50	0	multi-exon	FALSE	canonical	3	17	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	NA	False	NA	-9	True	AATAAA	-18	NA	7543131	7540453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7541054_7542770
transcript_154088.known	chr6	-	888	1	FSM	ENSG00000261189.2	ENST00000561592.1	888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGCTAATTACCTTCTGA	1745	False	NA	-6	True	AATAAA	-21	NA	7541338	7540450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7540400_7541300
transcript_154089.known	chr6	+	7812	24	FSM	ENSG00000096696.15	ENST00000418664.2	7812	24	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_23	35.3794446532129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGTGTTTTAATTT	-12	True	NA	20	True	AATAAA	-15	NA	7541616	7586572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7579773_7582641
transcript_15409.known	chr1	-	1159	8	FSM	ENSG00000160818.17	ENST00000438976.6	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	170.172061785256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAAGCAGGAAAAGCA	5	True	NA	-16	True	NA	NA	NA	156601470	156595212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599031_156601408
transcript_154090.known	chr6	+	9697	24	FSM	ENSG00000096696.15	ENST00000379802.8	9697	24	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_18	24.8683490125238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGGTCTTTTGAAGTT	-2	True	NA	13	True	ATTAAA	-28	NA	7541670	7586714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7581570_7582641
transcript_154091.nic	chr6	+	3762	23	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-148	7067	-148	3654	5prime_fragment	FALSE	canonical	3	148	junction_18	24.8363653001464	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCAATGAGAAGATCAC	21	False	NA	5	True	AATAAA	-2	NA	7541468	7579505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274
transcript_154092.nic	chr6	+	3957	23	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-280	7004	-280	3717	5prime_fragment	TRUE	canonical	3	148	junction_18	24.8363653001464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGGAAGACAGATTTGA	-2	True	NA	68	True	AAGAAA	-2	NA	7541336	7579568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274
transcript_154093.nic	chr6	+	4015	23	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-280	6946	-280	3775	5prime_fragment	FALSE	canonical	3	148	junction_18	24.8363653001464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAATGTGAAAAGGAGAAC	-2	True	NA	126	True	NA	NA	NA	7541336	7579626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274
transcript_154096.nic	chr6	+	3014	17	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-280	11778	-280	-1057	5prime_fragment	FALSE	canonical	3	158	junction_7	19.7167441531304	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAACTTGAAAGCTTATAA	-2	True	NA	7	True	GATAAA	-27	NA	7541336	7574794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656
transcript_15410.known	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	402	junction_2	46.244249504613	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-4	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_154101.known	chr6	+	4174	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	8.45576726264388	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	5	True	NA	15	True	ATTAAA	-22	NA	7590197	7611967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
transcript_154107.known	chr6	-	3030	13	FSM	ENSG00000259040.5	ENST00000439343.2	3030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	375.81751629688	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTCTGGTCTTTCCTT	12	True	NA	-8	True	AATAAA	-12	NA	8064364	7881521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_154110.known	chr6	-	1301	10	FSM	ENSG00000239264.9	ENST00000473453.2	1301	10	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_9	265.196828836039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGTTGGAGGTCACC	1366	False	NA	NA	False	NA	NA	NA	7910077	7883143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7909812
transcript_154112.known	chr6	-	2938	10	FSM	ENSG00000239264.9	ENST00000379757.9	2938	10	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	106.360440060563	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCTTTCCTTCAATG	2	True	NA	-3	True	AATAAA	-17	NA	7910788	7881516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7910513
transcript_154116.known	chr6	-	2445	6	FSM	ENSG00000188428.20	ENST00000244777.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	126.339859110259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTTTTTCAA	-17	True	NA	NA	False	ATTAAA	-23	NA	8064393	8013977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8027206_8027400_8041138_8041269_8062533_8062617_8064264
transcript_154118.known	chr6	-	1273	6	FSM	ENSG00000188428.20	ENST00000627748.2	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	133.093951778434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCATATTTTACAGTGCA	-20	True	NA	NA	False	NA	NA	NA	8064396	8015062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8054269_8054373_8062533_8062617_8064264
transcript_154119.known	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	43.8940485715319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-13	True	NA	-3	True	AATAAA	-13	NA	8064389	8013566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_154124.known	chr6	-	368	4	FSM	ENSG00000188428.20	ENST00000543936.7	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	130.233977474732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGCCATGGAAAGGCT	-9	True	NA	NA	False	NA	NA	NA	8064385	8015723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8062533_8062617_8064264
transcript_154125.known	chr6	-	562	4	FSM	ENSG00000124802.12	ENST00000429723.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	881.684876938593	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATCAGTTTTTAC	-2	True	NA	2	True	CATAAA	-16	NA	8102548	8073359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8073511_8090185_8090282_8097266_8097468_8102434
transcript_154126.known	chr6	-	591	4	FSM	ENSG00000124802.12	ENST00000502429.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	852.705628507804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATTATTTTGAATTTT	141	False	NA	NA	False	NA	NA	NA	8102481	8078493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8078741_8090185_8090282_8097266_8097468_8102434
transcript_154127.known	chr6	-	1047	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	1504	junction_1	207.25346800476	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCGTTGTTTCTTTCT	-2	True	NA	-3	True	AGTAAA	-17	NA	8102548	8079394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
transcript_154133.known	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_2	138	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-13	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8090282_8097266_8097468_8102434
transcript_154134.known	chr6	-	2200	12	FSM	ENSG00000124786.12	ENST00000648867.1	2200	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	38.5321589419445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGATGTGTTAATAGA	-12	True	NA	-7	True	AATAAA	-18	NA	8435561	8413073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8418743_8418886_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435227
transcript_154137.known	chr6	-	3566	11	FSM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_6	13.1030530793399	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTCTACACTTTCCT	4	True	NA	NA	False	TATAAA	-21	NA	8435545	8411434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_154140.nic	chr6	-	1907	10	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	17.3319087733693	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-16	True	NA	-1	True	AATAAA	-24	NA	8435565	8413067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
transcript_154141.nnic	chr6	-	1796	10	NNC	ENSG00000124786.12	novel	2137	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	22.3959872949058	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-1	True	NA	-1	True	AATAAA	-24	NA	8435550	8413067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435438
transcript_154153.known	chr6	+	2851	6	FSM	ENSG00000285219.3	ENST00000647365.1	2851	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTTGGTGCTGTGGTA	-14	True	NA	NA	False	AATAAA	-16	NA	8435619	8792306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_8436179_8437962_8438032_8784190_8784338_8785116_8785218_8788821_8790435_8791944
transcript_154154.known	chr6	+	1623	3	FSM	ENSG00000285219.3	ENST00000644038.1	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTTTTGTGATTTT	6	True	NA	NA	False	AATAAA	-24	NA	8435639	8471005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_8436179_8437962_8438032_8469990
transcript_154156.known	chr6	+	4579	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_1	65	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	-5	True	NA	12	True	AATAAA	-19	NA	10555808	10629368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10557343_10621350_10621444_10626416
transcript_154157.known	chr6	+	4200	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	66	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	-2	True	NA	12	True	AATAAA	-19	NA	10585759	10629368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10586915_10621350_10621444_10626416
transcript_154159.known	chr6	-	541	5	FSM	ENSG00000137434.12	ENST00000460742.6	541	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.28010988928052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCGTCTTTTGTTTTG	80	False	NA	2	True	ATTAAA	-21	NA	10694533	10671417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_10671599_10683186_10683233_10684848_10684924_10686965_10687165_10694493
transcript_154161.known	chr6	-	627	5	FSM	ENSG00000137434.12	ENST00000259983.8	627	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.8140512819021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-3	True	NA	-2	True	ATTAAA	-17	NA	10694616	10671421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_10671599_10683186_10683233_10686965_10687165_10687479_10687562_10694493
transcript_154164.known	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	51.4186400365653	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	24	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_154173.nnic	chr6	+	1410	9	NIC	ENSG00000111845.5	novel	1523	10	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	242.513627194432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	-26	True	NA	29	True	TATAAA	-23	NA	10694921	10709782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_10695070_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_154177.nic	chr6	+	549	5	ISM	ENSG00000111845.5	ENST00000379568.4	1523	10	-39	6325	-39	-6325	5prime_fragment	FALSE	canonical	3	628	junction_1	34.5859436765863	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTTTTGTTTGAAA	-15	True	NA	NA	False	TATAAA	-6	NA	10694932	10703457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404
transcript_154182.known	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	89.824272888791	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	-40	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_154183.nnic	chr6	+	928	5	NIC	ENSG00000111843.14	novel	1016	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_4	423.528334353205	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	-40	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10730614
transcript_154186.known	chr6	+	899	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	438.979142443009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	15	True	NA	NA	False	AATAAA	-18	NA	10723124	10731129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_154187.known	chr6	+	472	4	FSM	ENSG00000111843.14	ENST00000466421.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	482.718229290016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	-1	True	NA	NA	False	AATATA	-30	NA	10723108	10730763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10723242_10725906_10726009_10728639_10728728_10730614
transcript_154196.known	chr6	+	929	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_5	116.286886620977	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	-8	True	NA	NA	False	AATAAA	-18	NA	10747804	10756981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_1542.nic	chr1	-	1073	4	ISM	ENSG00000178821.13	ENST00000310991.8	935	5	-45	0	-45	0	intron_retention	FALSE	canonical	3	19	junction_2	27.1088341484633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	NA	False	NA	-9	True	AATAAA	-17	NA	1919324	1917590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1918163_1918252_1918432_1918892_1918935_1919044
transcript_15420.known	chr1	-	934	7	FSM	ENSG00000160818.17	ENST00000415314.6	934	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	180.575930474321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGCACCATGAAGAGG	NA	False	NA	17	True	AAAAAG	-3	NA	156601490	156595444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_154204.known	chr6	+	992	5	FSM	ENSG00000137210.14	ENST00000475942.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_4	113.510737377571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCGGTGGTGCACGCCT	-8	True	NA	NA	False	AATACA	-11	NA	10747804	10755810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141
transcript_154210.known	chr6	+	787	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	541.36280579663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	-2	True	NA	NA	False	NA	NA	NA	10747810	10756947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
transcript_154212.known	chr6	+	559	5	FSM	ENSG00000137210.14	ENST00000473807.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	682.43621496811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCTCCTGCCTGGGCT	-12	True	NA	NA	False	NA	NA	NA	10747800	10802536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10802330
transcript_154213.known	chr6	+	502	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	659.874372513435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	-2	True	NA	-10	True	NA	NA	NA	10747810	10829165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
transcript_154216.known	chr6	+	730	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	571.104388200811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	4	True	NA	NA	False	AATAAA	-10	NA	10747816	10756973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
transcript_154217.known	chr6	+	1224	6	FSM	ENSG00000137210.14	ENST00000467317.5	1224	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	533.646849517544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTTCATATGATTTC	18	True	NA	NA	False	AATAAA	-43	NA	10747830	10759774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10758938
transcript_154218.nnic	chr6	+	472	3	NIC	ENSG00000137210.14	novel	374	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	24.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	NA	False	NA	28	True	AATAAA	-20	NA	10747734	10829203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_15422.known	chr1	+	1111	6	FSM	ENSG00000163382.13	ENST00000368235.8	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_3	73.963774917185	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTGTCCTTTA	-6	True	NA	28	True	AATGAA	-21	NA	156591775	156594299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
transcript_154221.known	chr6	+	2909	30	FSM	ENSG00000153157.13	ENST00000283141.11	2909	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.21515087651469	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGGATGTGTCTCTT	-15	True	NA	141	True	AATAAA	-25	NA	10887051	10974309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
transcript_154226.known	chr6	-	3988	8	FSM	ENSG00000197977.4	ENST00000354666.4	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.1398385850373	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGCGAGTTTTATT	7	True	NA	NA	False	AATAAA	-18	NA	11044305	10980758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_10983907_10989702_10989838_10990317_10990443_10995006_10995179_11000086_11000165_11005371_11005560_11010745_11010810_11044227
transcript_154227.known	chr6	+	4887	2	FSM	ENSG00000224531.6	ENST00000416247.4	4887	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTATGTGTCTCTGG	31	True	NA	NA	False	AATAAA	-16	NA	11093833	11138733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_11094390_11134402
transcript_154229.known	chr6	-	4522	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	5.78551831923659	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTTTCTTTTTC	3	True	NA	-3	True	ATTAAA	-23	NA	11232668	11183297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
transcript_154233.known	chr6	+	2035	5	FSM	ENSG00000078401.7	ENST00000379375.6	2035	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGGAATCATTACTG	0	True	NA	NA	False	AATAAA	-20	NA	12290360	12297194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_12290694_12292340_12292510_12293940_12294097_12294260_12294405_12295961
transcript_154236.known	chr6	+	615	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2707	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGTAAAGTCTGTAAAA	42	False	NA	NA	False	NA	NA	NA	12514109	12514724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_12514100_12514700
transcript_154237.known	chr6	+	3045	13	FSM	ENSG00000112137.19	ENST00000675203.2	3045	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.94061961926055	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGTCCAGTGTCAT	-2	True	NA	NA	False	NA	NA	NA	13013553	13287837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13014140_13053364_13053530_13160203_13160285_13182518_13182687_13184798_13185006_13205814_13206137_13227815_13228064_13230036_13230194_13272859_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
transcript_154252.nic	chr6	-	1296	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	288.703505842437	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-25	True	NA	-21	True	AATAAA	-16	NA	13328547	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_154253.nic	chr6	-	1306	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	282.229317674656	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	NA	False	NA	-21	True	AATAAA	-16	NA	13328577	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
transcript_154254.nic	chr6	-	1168	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	240.847822222639	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	NA	False	NA	-21	True	AATAAA	-16	NA	13328579	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_154256.nnic	chr6	-	1341	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	299.158343165813	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-33	True	NA	-21	True	AATAAA	-16	NA	13328555	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
transcript_154257.nic	chr6	-	1201	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	289.949467800082	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-33	True	NA	-21	True	AATAAA	-16	NA	13328555	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
transcript_154259.nic	chr6	-	1225	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	305.408833460258	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	NA	False	NA	-21	True	AATAAA	-16	NA	13328577	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328315
transcript_15426.known	chr1	+	901	6	FSM	ENSG00000163382.13	ENST00000368234.7	901	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_4	720.630446206653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAACTGTGGATTCC	-20	True	NA	-23	True	AATAAA	-17	NA	156591761	156594131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593463_156593556_156593881
transcript_154260.known	chr6	-	1084	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	281.490921503499	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	NA	False	NA	-24	True	AATAAA	-13	NA	13328583	13304953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
transcript_154265.known	chr6	-	1027	7	FSM	ENSG00000145979.18	ENST00000343141.8	1027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	289.738196001532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	NA	False	NA	-24	True	AATAAA	-13	NA	13328583	13304953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_154276.known	chr6	-	1282	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	292.831915289719	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-15	True	NA	-21	True	AATAAA	-16	NA	13328537	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_154277.known	chr6	-	1116	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	246.221403602199	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-9	True	NA	-21	True	AATAAA	-16	NA	13328531	13304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_154278.known	chr6	-	8796	2	FSM	ENSG00000145990.11	ENST00000379287.4	8796	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTCTTTGCCTGTTT	19	True	NA	NA	False	AATAAA	-20	NA	13487600	13357829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13365663_13486637
transcript_154280.known	chr6	+	3900	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	48.3988062295388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574226	13614558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_154284.nic	chr6	+	1545	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-14	-114	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATTCTGATTATATTT	208	False	NA	6	True	NA	NA	NA	13574514	13612173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_154285.nic	chr6	+	1590	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAATTTATTGTATAAA	-9	True	NA	6	True	AATAAA	-15	NA	13574583	13612287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_154288.known	chr6	+	4564	10	FSM	ENSG00000124523.17	ENST00000606117.2	4564	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	47.8178126839418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	8	True	NA	NA	False	NA	NA	NA	13574600	13615158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574745_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_154289.known	chr6	+	3401	9	FSM	ENSG00000124523.17	ENST00000680852.1	3401	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	19.2933764541098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGACTCCGTCTCAA	-9	True	NA	NA	False	NA	NA	NA	13574583	13603258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833
transcript_154290.known	chr6	+	4337	9	FSM	ENSG00000124523.17	ENST00000680402.1	4337	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	53.7620625999412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	-9	True	NA	NA	False	NA	NA	NA	13574583	13615158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13600833_13600950_13611789
transcript_154297.known	chr6	+	920	9	FSM	ENSG00000225921.7	ENST00000474485.1	920	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	550.484545082784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAGAGGGGACAACCT	243	False	NA	NA	False	NA	NA	NA	13615588	13632739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753_13620857_13632392
transcript_154298.known	chr6	+	1683	8	FSM	ENSG00000225921.7	ENST00000451315.7	1683	8	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_7	81.6033212609409	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGTCATCTGTAGT	-11	True	NA	52	True	AATACA	-22	NA	13615334	13621712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753
transcript_154299.nic	chr6	+	800	7	ISM	ENSG00000225921.7	ENST00000451315.7	1683	8	-75	1226	-75	-1226	5prime_fragment	FALSE	canonical	3	1570	junction_4	61.3912769771805	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCCAGCTTTATTCTC	NA	False	NA	NA	False	NA	NA	NA	13615259	13620486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407
transcript_1543.known	chr1	-	690	4	FSM	ENSG00000178821.13	ENST00000470931.2	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	25.152865973218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGTCGGGCCCCAATA	4	True	NA	NA	False	NA	NA	NA	1919270	1917936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1918163_1918252_1918432_1918892_1919089_1919181
transcript_154303.known	chr6	+	646	4	FSM	ENSG00000225921.7	ENST00000420088.1	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_1	47.3591478902322	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTATTTTATTTTA	201	False	NA	NA	False	NA	NA	NA	13615546	13618217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769
transcript_154309.known	chr6	-	5471	9	FSM	ENSG00000050393.12	ENST00000379170.9	5460	9	-11	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	43.6348484585429	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTAACTTTTCATCATT	-63	True	NA	-21	True	AATAAA	-16	NA	13814568	13786556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
transcript_154319.nic	chr6	-	892	4	ISM	ENSG00000050393.12	ENST00000379170.9	5460	9	-27	14735	-16	-10504	5prime_fragment	FALSE	canonical	3	469	junction_1	16.0485374896143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGTAAAACAGAGCCTCT	NA	False	NA	4	True	NA	NA	NA	13814584	13801291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_13801390_13802242_13802347_13806924_13807045_13814014
transcript_154320.known	chr6	+	3629	3	FSM	ENSG00000180537.13	ENST00000488300.6	3629	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCGGTTTTAGTTTGTT	-20	True	NA	NA	False	AATAAA	-22	NA	13924951	13980310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13925024_13974209_13974365_13976908
transcript_154321.known	chr6	+	826	2	FSM	ENSG00000180537.13	ENST00000420478.2	826	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTCACACAACTGGACT	348	False	NA	NA	False	NA	NA	NA	13924895	13977606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13925024_13976908
transcript_154322.known	chr6	+	2328	5	FSM	ENSG00000112149.10	ENST00000379153.4	2328	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	15.3683928893037	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTGTAAACCAGTTTG	-1	True	NA	NA	False	AATAAA	-45	NA	14117771	14136906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_14117849_14117949_14118066_14131519_14131749_14133648_14133756_14135107
transcript_154338.nnic	chr6	-	1377	3	NNC	ENSG00000234261.5	novel	1915	5	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	6	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	139	False	NA	-4	True	AATAAA	-13	NA	15022027	14976212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_14977319_14997415_14997476_15021816
transcript_154342.nnic	chr6	+	4896	19	NNC	ENSG00000008083.14	novel	6003	18	NA	NA	-607	-939	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_1	164.024388430501	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGGAAGCCGTAAGTGC	-8	True	NA	72	True	AAAAAG	-10	NA	15245461	15521101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_15245608_15246380_15246585_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_154349.known	chr6	+	6003	18	FSM	ENSG00000008083.14	ENST00000341776.7	6003	18	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	122.553201497276	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACTGAATGGAATGAGC	13	True	NA	35	True	AATAAA	-37	NA	15246068	15522042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_15246585_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_15435.known	chr1	+	1012	5	FSM	ENSG00000163382.13	ENST00000368233.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_3	66.6352009076284	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGATGGGACGTGGAGA	-4	True	NA	NA	False	NA	NA	NA	156591777	156593876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407
transcript_154354.known	chr6	+	5595	18	FSM	ENSG00000008083.14	ENST00000397311.4	5595	18	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	170.673791932432	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGACTGAATGGAATGA	2281	False	NA	33	True	AATAAA	-35	NA	15248854	15522040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_15248965_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_154360.nnic	chr6	+	5265	17	NIC	ENSG00000008083.14	novel	6003	18	NA	NA	-93	-687	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	160.023423578394	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATCCCTTTTGTACATA	-1	True	NA	58	True	AAAAAG	-18	NA	15245975	15521353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_15246585_15374116_15374253_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_154382.nnic	chr6	-	1458	10	NIC	ENSG00000047579.20	novel	1383	10	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	75.6626691716122	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	NA	False	NA	-12	True	AATAAA	-17	NA	15663099	15522806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_15523220_15524525_15524670_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_154391.known	chr6	-	1518	11	FSM	ENSG00000047579.20	ENST00000513680.5	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	106.572979689976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAACAGCTAACAATAAA	-40	True	NA	-48	True	NA	NA	NA	15663058	15522842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15660382_15660522_15662813
transcript_154392.nic	chr6	-	697	6	ISM	ENSG00000047579.20	ENST00000338950.9	1880	9	-124	91725	-41	-90748	5prime_fragment	FALSE	canonical	3	218	junction_1	15.5692003648229	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATTACAAGAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	15663099	15615287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_154394.known	chr6	-	1880	9	FSM	ENSG00000047579.20	ENST00000338950.9	1880	9	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	50.7364513934508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTAGATTATCAAGGT	43	True	NA	NA	False	NA	NA	NA	15662975	15523562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_154395.known	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	TRUE	canonical	1	87	junction_2	48.9628228831974	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-10	True	NA	-12	True	AATAAA	-17	NA	15663028	15522806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_154396.known	chr6	-	1359	9	FSM	ENSG00000047579.20	ENST00000355917.7	1359	9	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_7	78.3923425788514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-40	True	NA	-15	True	AATAAA	-14	NA	15663058	15522809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
transcript_154397.known	chr6	-	1305	8	FSM	ENSG00000047579.20	ENST00000622898.4	1305	8	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_7	84.019434097847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-40	True	NA	-15	True	AATAAA	-14	NA	15663058	15522809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15662813
transcript_154398.known	chr6	-	1404	10	FSM	ENSG00000047579.20	ENST00000510395.5	1404	10	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_8	78.7781695649245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	11	True	NA	-15	True	AATAAA	-14	NA	15663007	15522809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
transcript_1544.known	chr1	-	878	4	FSM	ENSG00000178821.13	ENST00000602604.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	24.8506650928211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCATGGCTCCTCCTG	5	True	NA	NA	False	NA	NA	NA	1919269	1918098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1918163_1918252_1918935_1919044_1919089_1919181
transcript_154400.known	chr6	+	3072	7	FSM	ENSG00000007944.15	ENST00000356840.8	3072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.5277674973257	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	-1	True	NA	11	True	AATAAA	-15	NA	16129085	16148248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_154401.nic	chr6	+	3082	6	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	-23	1357	-23	-1357	intron_retention	FALSE	canonical	0	0	junction_5	38.2015706483385	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAGCTACTCCTCACT	NA	False	NA	NA	False	AAAAAG	-10	NA	16129062	16146891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896
transcript_154403.known	chr6	+	2796	6	FSM	ENSG00000007944.15	ENST00000349606.4	2796	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.4439447075719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	84	False	NA	11	True	AATAAA	-15	NA	16129170	16148248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_16129410_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_154405.nic	chr6	+	843	2	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	-23	17196	-23	-17196	5prime_fragment	FALSE	canonical	3	104	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCTACCCGAGTGACTG	NA	False	NA	NA	False	AAAAAG	-4	NA	16129062	16131052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_16129410_16130556
transcript_154406.known	chr6	+	1508	9	FSM	ENSG00000137198.10	ENST00000259727.5	1508	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	9.4339811320566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTGGAGTTTGTA	-3	True	NA	29	True	AATATA	-23	NA	16238586	16295549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_16238781_16246841_16246962_16250283_16250368_16254561_16254736_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_154408.nnic	chr6	+	1101	6	NNC	ENSG00000137198.10	novel	793	2	NA	NA	506	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	19.7727084639409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGGAGTTGCTGGAGT	NA	False	NA	24	True	AATATA	-18	NA	16258478	16295544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_16258649_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_15441.known	chr1	+	6317	5	FSM	ENSG00000163382.13	ENST00000680529.1	6317	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_2	73.6117347981964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACTTGAGCCCAGGAG	-6	True	NA	NA	False	NA	NA	NA	156591775	156599350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156591987_156592100_156592476_156592556_156592671_156593407_156593556_156593881
transcript_154410.known	chr6	-	1026	2	FSM	ENSG00000282024.1	ENST00000632346.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGCCCGCCTGCACCC	4839	False	NA	NA	False	TATAAA	-41	NA	16262926	16259100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_16259377_16262176
transcript_154411.known	chr6	+	2684	4	FSM	ENSG00000112183.15	ENST00000379052.10	2684	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCATTGGCTGTT	2	True	NA	8	True	ATTAAA	-16	NA	17281360	17293871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17281750_17282804_17282929_17284656_17284712_17291755
transcript_154414.known	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	13.1431752463229	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	5	True	NA	16	True	AATAAA	-22	NA	17393594	17557780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_154417.known	chr6	+	1404	11	FSM	ENSG00000112186.13	ENST00000465994.5	1404	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	34.4802842215664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATACAGCACTGTTTC	21	True	NA	NA	False	NA	NA	NA	17393711	17556568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_154418.known	chr6	+	1430	10	FSM	ENSG00000112186.13	ENST00000489374.5	1430	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	36.6302849808431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATGATGACTTGTGAAC	11	True	NA	NA	False	NA	NA	NA	17393632	17556659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_154420.nic	chr6	+	662	4	ISM	ENSG00000112186.13	ENST00000476263.1	891	9	-101	75972	-2	-75972	5prime_fragment	FALSE	canonical	3	102	junction_1	10.6562449087639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGTCTTCTTACTAC	9	True	NA	NA	False	AAAAAG	-12	NA	17393630	17463318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995
transcript_154421.known	chr6	+	4726	5	FSM	ENSG00000137414.7	ENST00000259963.4	4726	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	9.12071817347735	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTATTTTGTCTAT	9	True	NA	6	True	AATAAA	-15	NA	17600301	17611715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17601122_17602589_17602711_17604905_17605030_17605873_17606014_17608194
transcript_154429.known	chr6	-	6026	22	FSM	ENSG00000124789.12	ENST00000262077.3	6026	22	0	0	0	0	multi-exon	TRUE	canonical	3	234	junction_14	35.6783311080773	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTCTAGTTTTACC	-28	True	NA	-5	True	AATAAA	-14	NA	17706925	17615036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17668974_17669029_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
transcript_154438.known	chr6	+	1088	1	FSM	ENSG00000272269.1	ENST00000606771.1	1088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGGCTTCATTAATGTT	93	False	NA	NA	False	AATAAA	-28	NA	17706256	17707344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17706300_17707300
transcript_154439.known	chr6	-	2238	1	FSM	ENSG00000187566.6	ENST00000340650.6	2238	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGTTTGAGAAAGGC	-29	True	NA	35	True	NA	NA	NA	18122677	18120439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18120400_18122700
transcript_154440.nnic	chr6	-	1828	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	126.871569162395	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	978	False	NA	0	True	ATTAAA	-24	NA	18155171	18128310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_18128802_18130251_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_154443.known	chr6	-	3184	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_8	27.5927413462309	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-8	True	NA	0	True	ATTAAA	-24	NA	18155077	18128310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_154446.nnic	chr6	-	1744	8	NIC	ENSG00000137364.5	novel	3184	9	NA	NA	-7	-1402	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	134.393573704479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTTGGCAATTGTTG	1065	False	18155092	-14	True	AATAAA	-18	NA	18155084	18129712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_18130781_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_154451.known	chr6	+	2877	22	FSM	ENSG00000165097.16	ENST00000449850.2	2877	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	7.12792089152424	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCTGAAAGTCTGG	8	True	NA	NA	False	NA	NA	NA	18155443	18222212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_18155572_18155882_18155927_18159882_18159983_18161326_18161455_18162834_18162925_18166266_18166379_18171362_18171480_18185771_18185811_18187791_18188003_18191196_18191382_18197056_18197234_18197586_18197662_18200438_18200577_18201485_18201658_18205536_18205665_18207397_18207530_18208128_18208207_18212487_18212605_18213655_18213782_18215006_18215130_18217732_18217886_18221908
transcript_154458.known	chr6	-	2895	12	FSM	ENSG00000124795.17	ENST00000515770.2	2895	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	723.09404072744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	282	False	18264568	-61	True	ACTAAA	-40	NA	18264548	18224216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236597_18237380_18237517_18244507_18244604_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_154459.known	chr6	-	1360	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	502.057855231845	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATACCAGCAAAGAG	0	True	NA	NA	False	NA	NA	NA	18264267	18225665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
transcript_15446.known	chr1	+	3297	14	FSM	ENSG00000132692.19	ENST00000329117.10	3297	14	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_8	7.1235919401786	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	0	True	NA	8	True	AATAAA	-22	NA	156642116	156659528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156642276_156646046_156646146_156646800_156647176_156647507_156647683_156647982_156648111_156648567_156648862_156651455_156651690_156652247_156652893_156656281_156656390_156656937_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
transcript_154460.known	chr6	-	3142	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_10	112.952379346342	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTACATGTGAAAGTCT	-11	True	NA	-6	True	ATTAAA	-23	NA	18264530	18223859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_154461.known	chr6	-	3093	10	FSM	ENSG00000124795.17	ENST00000507591.2	3093	10	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_9	116.52372195299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAACAGGTATTTTCACA	-5	True	NA	76	True	TATAAA	-14	NA	18264524	18224345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_154466.nic	chr6	-	1326	8	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-280	13036	-256	-332	5prime_fragment	FALSE	canonical	3	1455	junction_7	130.491066235766	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATGTTAGAAATAACATT	26	False	NA	0	True	AAAACA	-12	NA	18264804	18237381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_154468.nic	chr6	-	984	8	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-43	13141	-19	-437	5prime_fragment	FALSE	canonical	3	1455	junction_7	130.491066235766	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAACAGAAAGCTACTTC	263	False	NA	-105	True	AAAAAG	-19	NA	18264567	18237486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_154470.nic	chr6	-	1145	7	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-280	25351	-256	6039	5prime_fragment	FALSE	canonical	3	1455	junction_6	120.52477845747	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGAGTCTTCAGATG	26	False	NA	14	True	AAGAAA	-3	NA	18264804	18249696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_154478.nic	chr6	-	860	5	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-280	32036	-256	144	5prime_fragment	FALSE	canonical	3	1455	junction_4	98.0086093157127	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGAAATGTTGAAAA	26	False	NA	24	True	TATAAA	-3	NA	18264804	18256381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_154481.nic	chr6	-	360	3	ISM	ENSG00000124795.17	ENST00000515742.2	1906	4	-52	1839	-1	-1839	5prime_fragment	FALSE	canonical	3	1455	junction_2	133	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAGGTTGACAATGCA	281	False	18264568	15	True	AAGAAA	-4	NA	18264549	18258364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18258406_18263842_18263997_18264384
transcript_154482.nic	chr6	-	573	2	ISM	ENSG00000124795.17	ENST00000515742.2	1906	4	-307	7318	-256	-7318	5prime_fragment	FALSE	canonical	3	1455	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGGAGTCGCATCCC	26	False	NA	-1	True	NA	NA	NA	18264804	18263843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18263997_18264384
transcript_154483.known	chr6	-	2851	10	FSM	ENSG00000124795.17	ENST00000651992.1	2851	10	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_4	103.479227950753	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	9	True	NA	-61	True	ACTAAA	-40	NA	18264208	18224216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842
transcript_154484.known	chr6	+	5032	8	FSM	ENSG00000137393.10	ENST00000259939.4	5032	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	5.52175659716791	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTGTTAACCTTTGT	1	True	NA	7	True	AATAAA	-14	NA	18387349	18468870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_18387631_18399498_18399700_18427580_18427686_18439683_18439745_18457154_18457360_18459606_18459752_18463290_18463381_18464926
transcript_154492.known	chr6	-	4325	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	6.52080005316321	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCAGTTGTTTTTTTTT	-20	True	NA	1	True	AATAAA	-42	NA	20212469	20099683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
transcript_154496.nnic	chr6	+	4823	7	NNC	ENSG00000112242.16	novel	5036	7	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.2834351595148	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	848	False	NA	16	True	AATAAA	-45	NA	20401836	20493714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_20402371_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_154497.known	chr6	+	5036	7	FSM	ENSG00000112242.16	ENST00000346618.8	5036	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	34.0379689954224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	-18	True	NA	16	True	AATAAA	-45	NA	20401878	20493714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_20402626_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_154499.known	chr6	+	4425	7	FSM	ENSG00000112242.16	ENST00000535432.2	4425	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	37.8901922226144	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	53	False	NA	16	True	AATAAA	-45	NA	20403678	20493714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_20403833_20479845_20479958_20481223_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_154506.known	chr6	+	3272	16	FSM	ENSG00000145996.11	ENST00000274695.8	3272	16	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	21.7650075937399	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	-21	True	NA	23	True	AATAAA	-23	NA	20534456	21232404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21108400_21108464_21198020_21198105_21201109_21201275_21230847
transcript_15451.known	chr1	+	2563	8	FSM	ENSG00000132692.19	ENST00000361588.5	2563	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	3.81190401832181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGTACCCTCTGTCTC	67	False	NA	14	True	AATAAA	-27	NA	156642242	156653472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156642276_156646046_156646146_156646800_156647176_156647507_156647683_156647982_156648111_156648567_156648862_156651455_156651690_156652247
transcript_154526.known	chr6	+	1455	3	FSM	ENSG00000272168.9	ENST00000659720.1	1455	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	47	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-23	True	NA	NA	False	NA	NA	NA	21666403	21784591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_21666646_21668646_21668900_21783631
transcript_154530.known	chr6	+	3980	12	FSM	ENSG00000124532.15	ENST00000443868.6	3980	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	237.696069567007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	NA	False	NA	10	True	AATAAA	-22	NA	24402907	24426194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24410726_24410800_24412285_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_154534.known	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	44.1317346135409	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	-21	True	NA	6	True	AATAAA	-18	NA	24402935	24426190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_154537.nnic	chr6	+	2012	11	NNC	ENSG00000124532.15	novel	3939	11	NA	NA	-3	784	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_9	171.638573753105	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATTGTATGGATTCCT	NA	False	NA	15	True	AATAAA	-17	NA	24402904	24424260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422964_24423051_24423583
transcript_154540.known	chr6	+	2266	11	FSM	ENSG00000112294.14	ENST00000348925.2	2266	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	11.216505694734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTATTCCTGAACCATA	-1	True	NA	NA	False	NA	NA	NA	24494968	24534303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24511829_24511869_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
transcript_154544.known	chr6	+	1740	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	44.0807340128441	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	-3	True	NA	6	True	AATAAA	-15	NA	24402953	24423476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
transcript_154546.known	chr6	+	5131	10	FSM	ENSG00000112294.14	ENST00000357578.8	5131	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	6.92998494645008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTCTGGTTGTGCT	-1	True	NA	32	True	AATAAA	-32	NA	24494968	24537207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
transcript_15455.known	chr1	-	5568	4	FSM	ENSG00000132688.11	ENST00000368223.4	5568	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.86744175568088	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGACTCTTCTTTCCCC	0	True	NA	-1	True	AATAAA	-20	NA	156677407	156668762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156673206_156673453_156673528_156675215_156675341_156676481
transcript_154550.known	chr6	+	3821	9	FSM	ENSG00000124532.15	ENST00000274747.11	3821	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	199.241020813988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	NA	False	NA	10	True	AATAAA	-22	NA	24402907	24426194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_154558.known	chr6	-	1935	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	56.6862711186168	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTTTTAGTATGT	-16	True	NA	-16	True	AATAAA	-15	NA	24666899	24649978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
transcript_15456.known	chr1	-	783	5	FSM	ENSG00000143320.9	ENST00000368221.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	848.307137774992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGCCCAGAGCAGGGT	-1	True	NA	-116	True	NA	NA	NA	156705747	156699755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705504_156705708
transcript_154560.known	chr6	-	2452	5	FSM	ENSG00000112308.13	ENST00000378119.9	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	2810	junction_2	145.354738484853	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGTGTTAACTTTTT	1	True	NA	-12	True	AATAAA	-41	NA	24719154	24704860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24718539
transcript_154562.known	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	467.421294622599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	-49	True	NA	NA	False	AATAAA	-36	NA	24667034	24705065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
transcript_154563.known	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	18.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	-7	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24667345_24697882_24698068_24701458
transcript_154564.known	chr6	+	1133	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	222.374871182275	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	-39	True	NA	32	True	AATATA	-15	NA	24774930	24786095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_154566.known	chr6	+	1263	7	FSM	ENSG00000112312.10	ENST00000230056.8	1263	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	198.237792113972	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTTCTATGCTTT	-33	True	NA	36	True	AATATA	-19	NA	24774936	24786099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_15457.known	chr1	-	1033	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_4	824.539265286984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAACCTGTCTC	-19	True	NA	22	True	ATTAAA	-8	NA	156705816	156699617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
transcript_154571.known	chr6	+	1039	7	FSM	ENSG00000112312.10	ENST00000620958.4	1039	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	394.248088841982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTGTCTGTTTCTA	26	False	NA	30	True	AATATA	-13	NA	24775412	24786093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24775503_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_154576.known	chr6	-	5295	22	FSM	ENSG00000111913.20	ENST00000643898.2	5295	22	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	34.952899957221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGCAGTCTGATGTTA	-4	True	NA	-5	True	AATAAA	-23	NA	24935960	24804283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24806474_24809716_24809808_24818541_24818626_24825225_24825429_24828136_24828296_24830508_24830671_24832255_24832392_24835702_24835872_24839090_24839273_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_154579.known	chr6	-	2678	15	FSM	ENSG00000111913.20	ENST00000644411.1	2678	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	57.7554662136063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAAGGCATTCATTCTT	2	True	NA	NA	False	NA	NA	NA	24911070	24840296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24840776_24842861_24843555_24847541_24847692_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24910817
transcript_154582.known	chr6	-	2442	14	FSM	ENSG00000111913.20	ENST00000378023.8	2442	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	43.3607408395411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	24877355	24839358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_154583.known	chr6	-	2200	14	FSM	ENSG00000111913.20	ENST00000644621.1	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	43.5421308592415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTCTTTTTTGGATAT	9	True	NA	NA	False	NA	NA	NA	24911063	24839441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24910817
transcript_154584.nic	chr6	-	2272	14	NIC	ENSG00000111913.20	novel	2442	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	31.8771681012264	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	677	False	NA	NA	False	AATAAA	-21	NA	24936072	24839358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_154585.known	chr6	-	2646	14	FSM	ENSG00000111913.20	ENST00000647136.1	2646	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	40.7966526066211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGACAGAGCAAGACCT	243	False	NA	NA	False	NA	NA	NA	24910885	24839993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24910817
transcript_154586.known	chr6	-	2704	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	27.6086342724614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTCTCAAAAAAAAA	8	True	NA	NA	False	NA	NA	NA	24935948	24839978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_154587.nnic	chr6	-	2698	14	NNC	ENSG00000111913.20	novel	2704	14	NA	NA	435	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_13	41.3901912171723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTCTCAAAAAAAAA	349	False	NA	NA	False	NA	NA	NA	24876920	24839978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876815
transcript_154588.known	chr6	-	3614	14	FSM	ENSG00000111913.20	ENST00000540914.5	3614	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	40.6003760148152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAAAAAGTGTGG	NA	False	NA	NA	False	AATAAA	-7	NA	24877365	24839372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_15460.known	chr1	-	974	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_3	191.362367135118	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	0	True	NA	34	True	AATAAA	-2	NA	156705583	156699605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
transcript_154606.known	chr6	+	5485	37	FSM	ENSG00000079691.18	ENST00000329474.7	5485	37	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	14.6055122352597	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	-16	True	NA	17	True	AATAAA	-19	NA	25279373	25620530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243_25520338_25528794_25528894_25537854_25537984_25539946_25540079_25550909_25551086_25554008_25554097_25556700_25556851_25580923_25580991_25581242_25581440_25594414_25594528_25600313_25600747_25604811_25604894_25606060_25606274_25610049_25610182_25619446
transcript_15461.nic	chr1	+	1819	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_6	13.1676784249176	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	-10	True	NA	25	True	ATTAAA	-14	NA	156728468	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
transcript_154618.nic	chr6	+	805	2	ISM	ENSG00000079691.18	ENST00000329474.7	5485	37	-307	335683	-11	-167750	5prime_fragment	FALSE	canonical	3	114	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCAGTGAAGAAGAAAGTA	-58	True	NA	NA	False	CATAAA	-27	NA	25279066	25284847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_25279836_25284811
transcript_154619.known	chr6	+	9418	8	FSM	ENSG00000112343.11	ENST00000357085.5	9418	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.57998973889762	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTTTCACCTTTCTG	-6	True	NA	NA	False	ATTAAA	-23	NA	25962801	25991231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_25962856_25963048_25963283_25966334_25966934_25969324_25969421_25971868_25972100_25973053_25973077_25973172_25973286_25983163
transcript_154622.known	chr6	+	4130	2	FSM	ENSG00000272462.4	ENST00000606723.2	4130	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCTAAATGTGTCAT	-4	True	NA	NA	False	CATAAA	-13	NA	25992661	26001775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_25992919_25997902
transcript_154625.known	chr6	+	508	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGTAGCTGTAAGAA	-2	True	NA	NA	False	NA	NA	NA	26020450	26020958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26020400_26021000
transcript_154626.known	chr6	-	511	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAACGAAAGTAGCTGT	1	True	NA	NA	False	NA	NA	NA	26032099	26031588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26031600_26032100
transcript_154627.known	chr6	-	527	1	FSM	ENSG00000278463.2	ENST00000615868.2	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCATTAAATGAGCTG	-2	True	NA	NA	False	NA	NA	NA	26033618	26033091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26033100_26033600
transcript_154628.known	chr6	-	731	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATCTCAATAAAAGAGCT	0	True	NA	0	True	NA	NA	NA	26056470	26055739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26055700_26056500
transcript_154629.known	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3718	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	-1	True	NA	4	True	AAAACA	-40	NA	26103932	26104337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26103900_26104300
transcript_15463.known	chr1	+	2271	8	FSM	ENSG00000143303.12	ENST00000368216.9	2271	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	12.0220885142681	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTAGGTAGATAAAAG	-10	True	NA	36	True	ATTAAA	-25	NA	156728468	156736960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_154630.known	chr6	-	659	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTTTTATATGTATA	2308	False	NA	15	True	ATTAAA	-18	NA	26123910	26114872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26115136_26123514
transcript_154632.nnic	chr6	+	1543	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	0	-130	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	7.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTAATTGAACTATGT	-8	True	NA	7	True	AATAAA	-15	NA	26124171	26138954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_154634.known	chr6	+	1462	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	23	False	NA	-17	True	AATAGA	-32	NA	26124202	26139084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26124634_26138053
transcript_154635.known	chr6	+	1668	2	FSM	ENSG00000180573.10	ENST00000314088.6	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	240	False	NA	15	True	AATAAA	-24	NA	26124144	26139116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26124750_26138053
transcript_154638.known	chr6	+	789	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	19	False	NA	13	True	AATAAA	-20	NA	26158145	26171349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26158560_26170974
transcript_154639.known	chr6	+	496	1	FSM	ENSG00000158373.9	ENST00000377777.6	486	1	24	-34	0	34	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGGGGTTATTGGACT	19	False	NA	15	True	AATAAA	-22	NA	26158145	26158641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26158100_26158600
transcript_154640.known	chr6	-	948	2	FSM	ENSG00000282988.2	ENST00000635200.1	948	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCGTAAACTGGAACC	-8	True	NA	NA	False	TATAAA	-18	NA	26199293	26196753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26197267_26198858
transcript_154641.known	chr6	+	1196	1	FSM	ENSG00000277224.3	ENST00000356530.6	473	1	4	-727	4	727	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAGATACTGAAGTT	2	True	NA	NA	False	AATACA	-23	NA	26199519	26200715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26199500_26200700
transcript_154642.known	chr6	-	1534	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	-4	-1041	-4	1041	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACAGTTTTGGCTGGCTG	-7	True	NA	NA	False	CATAAA	-28	NA	26216692	26215158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26215200_26216700
transcript_154643.known	chr6	+	509	1	FSM	ENSG00000277075.2	ENST00000303910.4	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCACTGTCCTAATTT	38	False	NA	10	True	AATACA	-21	NA	26216974	26217483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26217000_26217500
transcript_154646.known	chr6	+	2060	1	FSM	ENSG00000275713.3	ENST00000619466.3	462	1	37	-1635	37	1635	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGTGAGTTAGTATT	37	False	NA	16	True	AATAAA	-17	NA	26251650	26253710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26251600_26253700
transcript_154647.known	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-1	True	NA	-11	True	AATAAA	-31	NA	26285534	26281054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26281588_26285033
transcript_154649.known	chr6	+	3776	11	FSM	ENSG00000186470.14	ENST00000377708.7	3776	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	2.93428015022424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGTTTTTTC	3	True	NA	13	True	AATAAA	-18	NA	26365197	26378312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26365353_26367989_26368051_26368177_26368268_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
transcript_154650.known	chr6	+	509	4	FSM	ENSG00000186470.14	ENST00000527639.2	509	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5278	False	NA	NA	False	AAAACA	-45	NA	26370518	26373588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26370604_26372896_26373098_26373275_26373297_26373386
transcript_154651.known	chr6	+	3583	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.74278606921194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	-12	True	NA	6	True	AATAAA	-16	NA	26383107	26394874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_154665.known	chr6	+	1390	4	FSM	ENSG00000124508.17	ENST00000467485.5	1390	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	14.3372087784044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCCCAGGGCTACACA	-18	True	NA	NA	False	NA	NA	NA	26383101	26390908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26383182_26383791_26383916_26388012_26388295_26390004
transcript_154667.known	chr6	+	2733	8	FSM	ENSG00000124508.17	ENST00000416795.6	2733	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.1363621449748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	6	True	NA	12	True	AATAAA	-17	NA	26383207	26393992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26383314_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_154669.known	chr6	+	3388	10	FSM	ENSG00000026950.17	ENST00000289361.11	3388	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	3.62433476228891	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGCTTTTTC	10	True	NA	7	True	AATAAA	-18	NA	26402274	26415208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26402413_26405371_26405649_26405908_26406257_26407670_26407953_26409532_26409734_26409893_26409915_26410005_26410033_26411108_26411136_26411554_26411582_26413168
transcript_15467.nic	chr1	+	2346	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	16.7063473211928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	-10	True	NA	25	True	ATTAAA	-14	NA	156728468	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732287_156732365_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_154673.known	chr6	+	3113	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	14.6816559150582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	-1	True	NA	9	True	AATAAA	-18	NA	26457960	26469637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
transcript_154674.known	chr6	+	2890	8	FSM	ENSG00000112763.17	ENST00000312541.10	2890	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	10.5964953775158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	-7	True	NA	9	True	AATAAA	-18	NA	26457954	26469637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_154676.known	chr6	+	2845	7	FSM	ENSG00000112763.17	ENST00000541522.5	2845	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.8002976164114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCTAATGTGTGGCT	NA	False	NA	25	True	AATAAA	-34	NA	26457903	26469653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_154677.known	chr6	+	3024	9	FSM	ENSG00000112763.17	ENST00000377600.7	3024	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	15.8350876221131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	NA	False	NA	9	True	AATAAA	-18	NA	26457921	26469637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26462796_26462898_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_154681.known	chr6	+	2945	8	FSM	ENSG00000124557.14	ENST00000684113.1	2945	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.832993127835043	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTCTTAACCTTTCTT	-2	True	NA	6	True	AATAAA	-23	NA	26500302	26510425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26500359_26501229_26501366_26501589_26501938_26504924_26505207_26506682_26506833_26507949_26507971_26508060_26508088_26508500
transcript_154682.known	chr6	+	1943	2	FSM	ENSG00000182952.5	ENST00000377575.3	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	0	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	-13	True	NA	NA	False	AATAAA	-18	NA	26538365	26546933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26538502_26545126
transcript_154683.known	chr6	+	2943	3	FSM	ENSG00000146109.5	ENST00000274849.3	2943	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	1	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTTGCCTCTTAATAT	-4	True	NA	11	True	ATTAAA	-20	NA	26596952	26600739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26597224_26597913_26598111_26598264
transcript_154685.known	chr6	-	4811	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	9.10433352249844	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTCCACTGTACTG	0	True	NA	0	True	AATAAA	-22	NA	26659746	26634382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
transcript_154695.nnic	chr6	-	1788	7	NNC	ENSG00000241549.8	novel	1457	5	NA	NA	-381	6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	20.0969870599771	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTCTTCAAAGACAATAAG	NA	False	NA	NA	False	AAAAAG	-4	NA	26956935	26877914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_26878416_26878699_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119_26925276_26956388
transcript_154698.nnic	chr6	-	1975	7	NNC	ENSG00000241549.8	novel	1203	9	NA	NA	-375	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	21.320959953373	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGGTCTTCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	26956929	26877920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119_26925276_26956388_26956646_26956730
transcript_154699.nnic	chr6	-	1963	7	NNC	ENSG00000241549.8	novel	1203	9	NA	NA	-366	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.320959953373	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGGTCTTCAAAGAC	0	True	NA	NA	False	NA	NA	NA	26956920	26877920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119_26925276_26956388_26956650_26956737
transcript_15470.known	chr1	+	1802	7	FSM	ENSG00000143303.12	ENST00000368218.8	1802	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	14.4193157489066	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	NA	False	NA	25	True	ATTAAA	-14	NA	156728441	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
transcript_154700.nnic	chr6	-	2066	6	NIC	ENSG00000241549.8	novel	1203	9	NA	NA	-381	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_5	17.0880074906351	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGGTCTTCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	26956935	26877920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119_26925276_26956388
transcript_154704.known	chr6	+	903	3	FSM	ENSG00000224843.8	ENST00000662403.1	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTTGAAGATAGT	NA	False	NA	6	True	AATAAA	-18	NA	27020072	27023925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27020656_27023253_27023398_27023749
transcript_154708.known	chr6	-	408	2	FSM	ENSG00000124635.9	ENST00000606923.1	408	2	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	6027	False	NA	NA	False	TATAAA	-15	NA	27132548	27126078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27126463_27132524
transcript_154709.known	chr6	+	2250	1	FSM	ENSG00000196787.4	ENST00000359193.4	493	1	-1	-1756	-1	1756	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAGGTTAAGTTTTTAA	0	True	NA	7	True	AATAAA	-18	NA	27133041	27135291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27133000_27135300
transcript_154710.nnic	chr6	-	857	2	Genic_Genomic	ENSG00000197903.8	novel	495	1	NA	NA	-21	8068	multi-exon	FALSE	canonical	3	75	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	647	False	NA	-4	True	AATAAA	-21	NA	27146876	27138292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr6_-_27138682_27146408
transcript_154711.known	chr6	-	495	1	FSM	ENSG00000197903.8	ENST00000356950.2	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCGATATTAGAGCTG	-3	True	NA	-4	True	NA	NA	NA	27146855	27146360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27146400_27146900
transcript_154712.known	chr6	+	457	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACACTGTCTTAGAGAA	0	True	NA	NA	False	AAAACA	-20	NA	27147105	27147562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27147100_27147600
transcript_154715.nic	chr6	+	2052	6	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	3478	167	-15	0	3prime_fragment	FALSE	canonical	3	31	junction_1	35.2102257874044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	139	False	NA	19	True	AATAAA	-16	NA	27251178	27256453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_154716.known	chr6	+	955	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	32.6534837345114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCTTTTTCTGGACT	-17	True	NA	NA	False	GGGGCT	-7	NA	27251193	27255662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_154717.known	chr6	+	910	5	FSM	ENSG00000112812.16	ENST00000481125.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	45.5926255001837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGGATGATTATTCT	-9	True	NA	16	True	NA	NA	NA	27251201	27255514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254985_27255132_27255246
transcript_154720.known	chr6	+	962	5	FSM	ENSG00000112812.16	ENST00000468138.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	26.0480325552622	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCCTTTCCACTCCCTG	94	False	NA	NA	False	NA	NA	NA	27251619	27255319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_154721.known	chr6	+	1002	4	FSM	ENSG00000112812.16	ENST00000492575.5	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	49.3783578323765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTGCTCTGCCATG	2	True	NA	NA	False	NA	NA	NA	27251212	27255908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27251265_27252807_27252950_27254985_27255132_27255246
transcript_154724.known	chr6	+	1809	3	FSM	ENSG00000112812.16	ENST00000377456.6	1809	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	62	False	NA	22	True	AATAAA	-19	NA	27251587	27256456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27252041_27254985_27255132_27255246
transcript_154725.known	chr6	+	996	5	FSM	ENSG00000112812.16	ENST00000484493.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	46.1268631060036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTGACTTATGCTGG	88	False	NA	73	True	NA	NA	NA	27251298	27255571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27251502_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_154726.nnic	chr6	-	3374	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	16	1306	16	8	multi-exon	FALSE	canonical	3	55	junction_4	51.060625730596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	20	True	NA	-13	True	AATAAA	-14	NA	27375215	27357822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
transcript_154731.nnic	chr6	-	760	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	6	3398	6	-1597	multi-exon	FALSE	canonical	3	77	junction_4	42.6695148788922	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATGATGGAAAAAAAAAAA	-36	False	NA	NA	False	AAGAAA	-1	NA	27375271	27359848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_154733.nnic	chr6	-	1265	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	99	3332	99	-1597	multi-exon	FALSE	canonical	3	55	junction_4	51.060625730596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATGATGGAAAAAAAAAAA	103	False	NA	NA	False	AAGAAA	-1	NA	27375132	27359848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
transcript_154735.known	chr6	+	4042	3	FSM	ENSG00000124613.9	ENST00000244576.9	4042	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCTATAGCTTTTTA	-5	True	NA	25	True	AATAAA	-29	NA	27388758	27403908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27389076_27399441_27399551_27400292
transcript_154736.known	chr6	-	3328	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	11.0995495404093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTCTGTTTTTAATAT	-10	True	NA	-4	True	ATTAAA	-18	NA	27473105	27450746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
transcript_154737.known	chr6	-	3101	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	25.1348363829964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	-23	True	NA	0	True	ATTAAA	-22	NA	27473118	27450742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
transcript_154738.known	chr6	-	2899	6	FSM	ENSG00000096654.16	ENST00000377419.1	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	21.3297913726318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATTAACAATTCAA	7302	False	NA	-13	True	AATAAA	-16	NA	27472681	27450819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472660
transcript_15474.nic	chr1	+	1984	7	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_5	13.1244047484067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	-10	True	NA	25	True	ATTAAA	-14	NA	156728468	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
transcript_154743.known	chr6	+	728	4	FSM	ENSG00000281706.4	ENST00000662411.2	1496	4	414	354	356	63	multi-exon	FALSE	canonical	0	0	junction_2	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCAGGTGCCTCTTTT	334	False	NA	77	True	NA	NA	NA	27694440	27713352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27694507_27702313_27702418_27710680_27710890_27713003
transcript_154745.known	chr6	-	488	1	FSM	ENSG00000185130.6	ENST00000377401.4	451	1	-2	-35	-2	35	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGGGGCGAGGGGTC	-5	True	NA	-54	True	NA	NA	NA	27807931	27807443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27807400_27807900
transcript_154746.known	chr6	+	503	1	FSM	ENSG00000196747.5	ENST00000358739.5	495	1	26	-34	26	34	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTCGTCTTTGCCT	26	False	NA	44	True	NA	NA	NA	27808198	27808701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27808200_27808700
transcript_154747.known	chr6	+	1237	1	FSM	ENSG00000278828.2	ENST00000369163.4	1250	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTTTCACCCTAGAA	14	False	NA	3	True	AATAAA	-18	NA	27810063	27811300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27810100_27811300
transcript_154748.known	chr6	-	476	1	FSM	ENSG00000276368.2	ENST00000333151.5	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATCATAAAAAGATGACA	0	True	NA	1	True	CATAAA	-29	NA	27814777	27814301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27814300_27814800
transcript_154749.known	chr6	+	389	1	FSM	ENSG00000197238.5	ENST00000355057.3	389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAGCTGAAGAGTGG	0	True	NA	23	True	AATAAA	-24	NA	27824091	27824480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27824100_27824500
transcript_154750.known	chr6	-	387	1	FSM	ENSG00000273542.2	ENST00000611927.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCAGCTGAGGAGCCG	14	True	NA	NA	False	NA	NA	NA	27831560	27831173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27831200_27831600
transcript_154751.known	chr6	-	797	1	FSM	ENSG00000184357.5	ENST00000331442.5	797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACCTCTAAAAAATGGCT	0	True	NA	NA	False	NA	NA	NA	27867588	27866791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27866800_27867600
transcript_154752.known	chr6	-	502	1	FSM	ENSG00000275379.2	ENST00000616365.2	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCACCAAAAGGAAGCT	-2	True	NA	NA	False	NA	NA	NA	27872346	27871844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27871800_27872300
transcript_154753.known	chr6	-	387	1	FSM	ENSG00000275126.2	ENST00000618305.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCTGTGAAAGAGCTG	-2	True	NA	NA	False	NA	NA	NA	27873534	27873147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27873100_27873500
transcript_154754.known	chr6	-	512	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACTGAGGATAGCT	0	True	NA	NA	False	NA	NA	NA	27890826	27890314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27890300_27890800
transcript_154755.known	chr6	+	467	1	FSM	ENSG00000274641.2	ENST00000616182.2	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCAGAGAAAGAGCCTG	-1	True	NA	NA	False	NA	NA	NA	27893424	27893891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27893400_27893900
transcript_154756.known	chr6	-	1536	2	FSM	ENSG00000269293.4	ENST00000602810.2	1983	2	447	0	-19	0	multi-exon	FALSE	canonical	3	68	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGTATGATTGTTTTT	792	False	NA	NA	False	AATAAA	-12	NA	28136866	28121797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28123212_28136744
transcript_154757.known	chr6	+	1954	4	FSM	ENSG00000197279.5	ENST00000683778.1	1954	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	11.9536140513607	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	-3	True	NA	18	True	AATAAA	-33	NA	28080567	28089563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28080971_28085480_28085892_28086171_28086311_28088562
transcript_154758.known	chr6	-	686	2	FSM	ENSG00000272009.1	ENST00000605945.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCTTAAAGTGTGAAC	NA	False	NA	-7	True	ATTAAA	-25	NA	28081130	28078791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28078973_28080625
transcript_15476.nic	chr1	+	2425	7	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_1	11.5566238822398	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	-10	True	NA	25	True	ATTAAA	-14	NA	156728468	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_154760.known	chr6	+	1279	4	FSM	ENSG00000196812.6	ENST00000340487.5	1279	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	28.2410261066335	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	-7	True	NA	19	True	ATTAAA	-19	NA	28124608	28130082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28124678_28125412_28125831_28126782_28126922_28129429
transcript_154762.known	chr6	+	1628	5	FSM	ENSG00000226314.9	ENST00000440790.6	1628	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATATGTGTACTGTGGTT	3	True	NA	21	True	AATAAA	-36	NA	28161780	28169594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28161822_28162579_28162767_28164748_28164902_28166500_28167555_28169401
transcript_154763.known	chr6	-	992	1	FSM	ENSG00000176933.5	ENST00000469761.1	992	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTACCTGCCCTGGGGC	NA	False	NA	NA	False	NA	NA	NA	28218634	28217642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28217600_28218600
transcript_154767.known	chr6	+	1601	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	14.1970262926979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	8	True	NA	24	True	AATAAA	-25	NA	28225291	28233482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
transcript_154768.known	chr6	+	1659	4	FSM	ENSG00000137185.13	ENST00000252207.10	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	12.0277457017791	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTATCTGTGTTTAA	-9	True	NA	29	True	AATAAA	-30	NA	28225274	28233487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28232561
transcript_154770.known	chr6	+	2062	3	FSM	ENSG00000137185.13	ENST00000527436.5	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	12.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	55	False	NA	41	True	AGTAAA	-37	NA	28225338	28229230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28225367_28227011_28227505_28227689
transcript_154771.known	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	5.40832691319598	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-9	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
transcript_154774.known	chr6	+	3100	7	FSM	ENSG00000137338.6	ENST00000259883.3	3100	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	15.9478316185409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	-13	True	NA	7	True	NA	NA	NA	28281571	28302549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28281919_28283755_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_154779.known	chr6	+	2362	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	11.7756811551038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	6	True	NA	11	True	AATAAA	-11	NA	28267057	28278201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
transcript_154780.known	chr6	+	1998	4	FSM	ENSG00000197062.12	ENST00000623276.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	22.3954360429878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	8	True	NA	4	True	AATAAA	-19	NA	28267152	28277530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28267214_28271853_28272337_28272669_28272788_28276194
transcript_154782.known	chr6	+	2729	4	FSM	ENSG00000197062.12	ENST00000619937.4	2729	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.131126469709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGGAAGATAATTT	-5	True	NA	34	True	AATAAA	-34	NA	28267358	28278224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28267454_28271853_28272340_28272669_28272788_28276194
transcript_154784.known	chr6	+	3080	7	FSM	ENSG00000137338.6	ENST00000682144.1	3080	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	9.28559218478941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	-13	True	NA	7	True	NA	NA	NA	28281571	28302549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28281919_28283775_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_154785.known	chr6	+	588	3	FSM	ENSG00000197062.12	ENST00000617168.4	588	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGAGATGGCCCCTCTG	-2	True	NA	NA	False	AAGAAA	-14	NA	28267142	28272703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28267214_28271853_28272337_28272669
transcript_154786.known	chr6	+	4799	7	FSM	ENSG00000189298.14	ENST00000377255.3	4799	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	20.623611064344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAGTGGATTCTTAAA	3	True	NA	8	True	AATAAA	-15	NA	28349949	28369170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28350068_28350271_28350389_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_154791.known	chr6	+	4687	6	FSM	ENSG00000189298.14	ENST00000252211.7	4687	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.1424873893284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGGATTCTTAAATT	0	True	NA	10	True	AATAAA	-17	NA	28349946	28369172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28350068_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_1548.known	chr1	+	1914	9	FSM	ENSG00000187730.9	ENST00000378585.7	1914	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.29535658161602	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGCGCTTCACTCCT	-6	True	NA	22	True	AATAAA	-34	NA	2019344	2030758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2019492_2024941_2025055_2025333_2025402_2025517_2025739_2027576_2027660_2028154_2028293_2029110_2029267_2029550_2029763_2029982
transcript_154800.known	chr6	-	799	4	FSM	ENSG00000235109.8	ENST00000453745.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.04155872120988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTTGTAAACGAGACAG	303	False	NA	NA	False	NA	NA	NA	28336198	28326735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329715_28336081
transcript_154801.known	chr6	-	3050	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	11	True	NA	0	True	AATAAA	-30	NA	28336134	28324736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
transcript_154802.known	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.08248290463863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-3	True	NA	0	True	AATAAA	-30	NA	28336148	28324736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
transcript_154803.known	chr6	-	1005	3	FSM	ENSG00000235109.8	ENST00000435857.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCCAGCATCTCCG	126	False	NA	NA	False	NA	NA	NA	28336375	28326294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28326855_28327382_28327534_28336081
transcript_154804.known	chr6	+	1794	5	FSM	ENSG00000189298.14	ENST00000341464.9	1794	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.5928228816892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	3	True	NA	6	True	AATAAA	-15	NA	28349949	28366746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28350068_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_154805.known	chr6	-	5495	5	FSM	ENSG00000158691.15	ENST00000361028.5	5495	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.9014387744578	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTTCTGTAAAAAGCT	12	True	NA	0	True	AATAAA	-21	NA	28399734	28378954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
transcript_154806.known	chr6	-	5935	4	FSM	ENSG00000232040.4	ENST00000452236.3	5935	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTATTGTGTGTTTG	-9	True	NA	NA	False	NA	NA	NA	28587298	28570534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28573828_28574643_28576137_28579271_28579420_28586297
transcript_154807.known	chr6	-	709	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	52	629	52	-629	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACAGTGCTGGGATT	9	True	NA	NA	False	NA	NA	NA	28839006	28837868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28838321_28838749
transcript_154813.known	chr6	-	2963	8	FSM	ENSG00000204713.11	ENST00000377199.4	2963	8	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_4	29.2546873969605	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	-23	True	NA	-7	True	AATAAA	-18	NA	28923985	28903001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28904666_28907235_28907263_28908807_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
transcript_15482.nic	chr1	+	2122	7	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	13	0	intron_retention	FALSE	canonical	1	3	junction_1	17.0432456481218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	3	True	NA	25	True	ATTAAA	-14	NA	156728481	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_154821.nic	chr6	-	797	2	ISM	ENSG00000204713.11	ENST00000377199.4	2963	8	2	18960	2	-7186	5prime_fragment	FALSE	canonical	3	549	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAGTGAAAGATT	-21	True	NA	-13	True	NA	NA	NA	28923983	28921961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_28921988_28923212
transcript_154827.known	chr6	-	4525	23	FSM	ENSG00000204681.11	ENST00000377034.9	4525	23	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_19	40.2395974956456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGCACCTTGCAGTC	-53	True	NA	-11	True	AATAAA	-14	NA	29633183	29602237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29630457_29630644_29631395_29631600_29632300_29632386_29632849
transcript_154837.nic	chr6	-	4069	17	ISM	ENSG00000204681.11	ENST00000472823.5	4286	21	4960	10	-119	0	3prime_fragment	FALSE	canonical	3	67	junction_15	24.3487037642664	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGCACCTTGCAGTC	8270	False	NA	-11	True	AATAAA	-14	NA	29628171	29602237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485
transcript_15484.nnic	chr1	+	2037	7	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	17.6580167503476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	3	True	NA	25	True	ATTAAA	-14	NA	156728481	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156732365_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_154843.known	chr6	-	2082	5	FSM	ENSG00000204644.10	ENST00000376883.2	2082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.54950975679639	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	-12	True	NA	-1	True	AATAAA	-17	NA	29681152	29672482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29676880_29677367_29681061
transcript_154844.known	chr6	+	1283	7	FSM	ENSG00000204642.14	ENST00000334668.8	1283	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4.61880215351701	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	NA	False	NA	15	True	AATAAA	-27	NA	29723339	29726525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_154846.known	chr6	+	1319	7	FSM	ENSG00000204632.13	ENST00000360323.11	1319	7	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	5.7373048260195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTTCAAATTATTT	0	True	NA	-92	True	ATTAAA	-20	NA	29827824	29831021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_154847.known	chr6	+	1525	6	FSM	ENSG00000204632.13	ENST00000478355.5	1525	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.28012738724303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	20	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829933_29830377_29830411_29830767
transcript_154848.known	chr6	+	1127	6	FSM	ENSG00000204632.13	ENST00000376818.7	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.2097992144802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	20	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29827918_29828046_29828317_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_154859.known	chr6	+	1766	7	FSM	ENSG00000206503.13	ENST00000495183.5	1766	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	287.841053747068	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	16	False	NA	29	True	AATAAA	-30	NA	29942551	29945884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945062_29945092_29945233_29945282_29945450
transcript_154860.known	chr6	+	1535	8	FSM	ENSG00000206503.13	ENST00000376809.10	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	120.378823820844	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	-4	True	NA	15	True	AATAAA	-16	NA	29942531	29945870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29942627_29942756_29943027_29943267_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233_29945282_29945450
transcript_154872.known	chr6	+	754	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	76.985388224	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	8	True	NA	43	True	ATTAAA	-28	NA	30061262	30064909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_154874.known	chr6	+	851	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	9.97775303139718	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	10	True	NA	41	True	ATTAAA	-26	NA	30061264	30064907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
transcript_154876.known	chr6	-	3294	3	FSM	ENSG00000204623.10	ENST00000431012.5	3294	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGACTACTTTTGCT	-16	True	NA	NA	False	TATAAA	-16	NA	30061179	30054600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30057718_30058114_30058191_30061078
transcript_154877.known	chr6	+	1689	4	FSM	ENSG00000204619.8	ENST00000376769.6	1689	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	198.462982834471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	-17	True	NA	18	True	AATAAA	-19	NA	30067204	30070333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30067480_30068278_30068354_30068589_30068699_30069103
transcript_154878.known	chr6	-	2084	4	FSM	ENSG00000204618.10	ENST00000244360.8	2084	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.32049379893857	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGACTGATCTCTGT	0	True	NA	-3	True	AATAAA	-20	NA	30075769	30070269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30071692_30073156_30073249_30073455_30073479_30075222
transcript_154879.known	chr6	+	1621	3	FSM	ENSG00000204619.8	ENST00000376772.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	4.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	-24	True	NA	18	True	AATAAA	-19	NA	30067197	30070333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30067480_30068589_30068699_30069103
transcript_15488.nic	chr1	+	1940	6	NIC	ENSG00000143303.12	novel	1802	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_4	14.560219778561	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	-10	True	NA	25	True	ATTAAA	-14	NA	156728468	156736949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
transcript_154881.nic	chr6	-	3436	10	NIC	ENSG00000234127.9	novel	3518	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_8	15.8402518997304	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	697	False	NA	NA	False	AATAAA	-16	NA	30213435	30184454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_154882.known	chr6	-	3518	10	FSM	ENSG00000234127.9	ENST00000454678.7	3518	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_7	39.0965882127398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-1	True	NA	NA	False	AATAAA	-16	NA	30213406	30184454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199265_30201034_30201139_30204655_30204766_30213304
transcript_154883.known	chr6	-	3318	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	31.0199028850833	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-22	True	NA	NA	False	AATAAA	-16	NA	30213427	30184454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
transcript_154885.known	chr6	-	1124	6	FSM	ENSG00000234127.9	ENST00000416596.5	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	16.5093912667912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCAGAGCTCATGCAG	-14	True	NA	NA	False	NA	NA	NA	30213419	30196535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_1549.known	chr1	+	1707	8	FSM	ENSG00000187730.9	ENST00000638771.1	1707	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.44045559394066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTCCCCTCTGCGTGTT	28	False	NA	NA	False	NA	NA	NA	2019378	2030365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2019492_2024941_2025055_2025333_2025402_2025517_2025739_2027576_2027660_2028154_2028293_2029110_2029267_2029550
transcript_154901.known	chr6	+	3198	9	FSM	ENSG00000204599.15	ENST00000396548.5	3198	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	42.2993424889797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	349	False	NA	27	True	NA	NA	NA	30326919	30343729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30326996_30327651_30327697_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_154904.known	chr6	+	3249	8	FSM	ENSG00000204599.15	ENST00000396551.8	3624	8	375	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	30.7418480981511	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	273	False	NA	27	True	NA	NA	NA	30326843	30343729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30326996_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_154910.nic	chr6	+	3557	8	NIC	ENSG00000204599.15	novel	3338	9	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	40.3181227292165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTTGTGTGGTAA	-15	True	NA	26	True	NA	NA	NA	30326426	30343728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30326888_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_154914.nic	chr6	+	3642	8	NIC	ENSG00000204599.15	novel	3338	9	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	31.3088629298348	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTTGTGTGGTAA	-12	True	NA	26	True	NA	NA	NA	30326429	30343728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_154921.known	chr6	-	4356	6	FSM	ENSG00000231074.10	ENST00000654996.1	4356	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	106.969902309014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGAGATCACACCATTGC	2718	False	NA	NA	False	NA	NA	NA	30326701	30286746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30289495_30291536_30291983_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_154924.known	chr6	+	577	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	502.756899505119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	NA	False	NA	24	True	AATAAA	-22	NA	30345130	30346857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
transcript_154925.known	chr6	+	522	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	498.95609776813	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	12	True	NA	24	True	AATAAA	-22	NA	30345168	30346857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
transcript_154926.nnic	chr6	+	509	5	NNC	ENSG00000241370.6	novel	528	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	517.103954732508	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGATTCTGTTCTGTGGG	-9	True	NA	21	True	AATAAA	-19	NA	30345147	30346854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_30345229_30345321_30345399_30345490_30345574_30346431_30346558_30346712
transcript_154927.known	chr6	-	2390	5	FSM	ENSG00000231074.10	ENST00000656629.1	2390	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	113.816464099005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTCATAATTGCCACAA	2718	False	NA	NA	False	NA	NA	NA	30326701	30288266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30289495_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_154928.known	chr6	-	4929	5	FSM	ENSG00000231074.10	ENST00000666294.1	4929	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	100.494713791323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGAGATCACACCATTGC	-4	True	NA	NA	False	NA	NA	NA	30326871	30286746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30289495_30291536_30292600_30294470_30294965_30296131_30296238_30326353
transcript_154933.known	chr6	-	7267	5	FSM	ENSG00000231074.10	ENST00000664861.1	7267	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	112.5622050246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	10	True	NA	NA	False	AATACA	-39	NA	30326809	30286805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326150
transcript_154934.known	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	109.782455337818	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	1	True	NA	NA	False	NA	NA	NA	30326866	30286727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_154938.known	chr6	+	450	4	FSM	ENSG00000241370.6	ENST00000489124.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	512.358164655243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	-6	True	NA	24	True	AATAAA	-22	NA	30345150	30346857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345229_30345297_30345399_30346431_30346558_30346712
transcript_154939.known	chr6	+	621	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	102.944429453738	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	-2	True	NA	24	True	AATAAA	-22	NA	30345154	30346857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
transcript_154941.known	chr6	-	3898	4	FSM	ENSG00000231074.10	ENST00000665953.1	3898	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	111.955348242056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	21	True	NA	NA	False	NA	NA	NA	30326846	30286689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30289495_30294470_30294965_30296131_30296238_30326353
transcript_154944.known	chr6	-	4601	4	FSM	ENSG00000231074.10	ENST00000602290.2	4601	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	121.194976060158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTATTGTACAAAGCTG	-1	True	NA	NA	False	NA	NA	NA	30326868	30291198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30314268_30314483_30326353
transcript_15495.known	chr1	-	2985	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	106.615612782035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	-29	True	NA	-29	True	GATAAA	-17	NA	156728766	156721894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
transcript_154951.nic	chr6	-	2804	4	NIC	ENSG00000231074.10	novel	7230	4	NA	NA	-11	0	intron_retention	FALSE	canonical	3	39	junction_3	102.042474816454	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGAGTAAGGTTGGTAT	2258	False	NA	-6	True	ATTAAA	-18	NA	30327161	30291548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30292600_30294470_30294965_30296131_30296238_30326008
transcript_154952.known	chr6	-	6734	4	FSM	ENSG00000231074.10	ENST00000668974.1	6734	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	91.7205902001653	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	2929	False	NA	NA	False	AATACA	-39	NA	30326490	30286805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326150
transcript_154953.known	chr6	-	7230	4	FSM	ENSG00000231074.10	ENST00000659132.1	7230	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	65.4335965353851	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	30327086	30286702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
transcript_154963.known	chr6	-	5050	3	FSM	ENSG00000231074.10	ENST00000426882.6	5050	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	79.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAACAATGTTAAAA	2269	False	NA	-45	True	NA	NA	NA	30327150	30290817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30326353
transcript_154964.known	chr6	-	4433	3	FSM	ENSG00000231074.10	ENST00000454129.5	4433	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	18	True	NA	NA	False	NA	NA	NA	30326376	30291005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30326008
transcript_154965.known	chr6	-	4518	3	FSM	ENSG00000231074.10	ENST00000449544.6	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCCAAAGTTTGTCAC	-1	True	NA	-25	True	NA	NA	NA	30326395	30290797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30326150
transcript_154975.known	chr6	-	3342	1	FSM	ENSG00000231074.10	ENST00000602319.1	3342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACCAGAATCTGGGACAC	6931	False	NA	NA	False	GATAAA	-3	NA	30304115	30300773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30300800_30304100
transcript_154976.known	chr6	+	594	4	FSM	ENSG00000241370.6	ENST00000428040.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1104	junction_3	82.7862038962746	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	2	True	NA	24	True	AATAAA	-22	NA	30345158	30346857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345399_30345490_30345574_30346431_30346558_30346712
transcript_154979.known	chr6	+	2548	8	FSM	ENSG00000204592.9	ENST00000376630.5	2548	8	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_2	12.2807298859071	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	-2	True	NA	23	True	AATAAA	-19	NA	30489508	30494194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30489596_30489725_30489996_30490239_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_15500.nic	chr1	-	2657	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-2	-369	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	107.08667309967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATTGTGTGGTCCCTT	-31	True	NA	NA	False	NA	NA	NA	156728768	156722263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
transcript_155000.known	chr6	-	6801	12	FSM	ENSG00000204590.13	ENST00000376621.8	6801	12	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_5	38.8429769650079	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTGGATATGTTTCT	-3	True	NA	NA	False	AATAAA	-32	NA	30556489	30541380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
transcript_155001.known	chr6	+	2005	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.22494979899437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	11	True	NA	79	True	AATAAA	-28	NA	30557315	30563723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
transcript_155002.known	chr6	+	1845	4	FSM	ENSG00000204576.12	ENST00000376560.8	1845	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	16.8720676464584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	-10	True	NA	79	True	AATAAA	-28	NA	30557294	30563723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30558149_30558213_30561833_30562125_30562388
transcript_155003.known	chr6	+	1797	3	FSM	ENSG00000204576.12	ENST00000376557.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	16	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	-1	True	NA	79	True	AATAAA	-28	NA	30557279	30563723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30561833_30562125_30562388
transcript_155005.known	chr6	+	1944	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.8878405775519	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	9	True	NA	79	True	AATAAA	-28	NA	30557313	30563723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
transcript_155007.known	chr6	+	3426	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	89.5865115715282	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	2	True	AAAAAG	-20	NA	30571423	30591522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_155009.known	chr6	+	3405	25	FSM	ENSG00000204574.14	ENST00000326195.13	3405	25	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_3	94.0789783462101	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	-11	True	NA	2	True	AAAAAG	-20	NA	30571441	30591522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_155027.known	chr6	+	3131	24	FSM	ENSG00000204574.14	ENST00000376545.7	3131	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	155.38220454609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTTTGGAGATTG	NA	False	NA	16	True	AATAAA	-21	NA	30571392	30591313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_155032.known	chr6	+	606	7	FSM	ENSG00000204574.14	ENST00000468958.1	606	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	236.387217646527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAATTATAAAG	-11	True	NA	NA	False	AATAAA	-32	NA	30571441	30580448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30571561_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_155035.nic	chr6	+	284	3	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	27	13400	-4	-581	5prime_fragment	FALSE	canonical	3	646	junction_2	14.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAGTGCCACAGGGCCC	NA	False	NA	9	True	NA	NA	NA	30571419	30577913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817
transcript_155040.known	chr6	-	4511	20	FSM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_19	25.5334227762429	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTATTTAACCCCTAG	-2	True	NA	-13	True	AATAAA	-15	NA	30617243	30600412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604736_30604993_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_155044.nic	chr6	-	1482	11	ISM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	4605	0	0	5prime_fragment	FALSE	canonical	3	161	junction_10	24.9407297407273	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTCACCTACGGCTGC	-2	True	NA	17	True	AAGAAA	-7	NA	30617243	30605017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_155045.nic	chr6	-	1377	10	ISM	ENSG00000204569.10	ENST00000376511.7	4511	20	-3	5541	-2	-145	5prime_fragment	FALSE	canonical	3	161	junction_9	22.9691150659659	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATCAAAGTGAAGATCAT	-5	True	NA	-1	True	AATACA	-33	NA	30617246	30605953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_155046.known	chr6	+	1398	7	FSM	ENSG00000204568.12	ENST00000259873.5	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_4	68.2609372595744	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	-7	True	NA	25	True	AATAAA	-19	NA	30617839	30626392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_15505.nic	chr1	-	2024	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-14	-711	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	115.566238822398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATTAACCTGGTTGG	-25	True	NA	NA	False	NA	NA	NA	156728455	156722605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_155057.known	chr6	+	1476	13	FSM	ENSG00000137343.18	ENST00000376485.8	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	42.5645751248095	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	-11	True	NA	14	True	AATAAA	-23	NA	30626855	30646823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_155059.known	chr6	+	1738	13	FSM	ENSG00000137343.18	ENST00000330083.6	1738	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	57.9436987274908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	7	True	NA	12	True	AATAAA	-21	NA	30626873	30646821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30627275_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_155061.known	chr6	+	1195	12	FSM	ENSG00000137343.18	ENST00000468713.5	1195	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	52.1090718771773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	-8	True	NA	14	True	AATAAA	-23	NA	30626892	30646823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066_30646110_30646468
transcript_155065.known	chr6	+	2119	11	FSM	ENSG00000137343.18	ENST00000329992.12	2119	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	62.6277893590377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	19	True	NA	53	True	AAAAAG	-17	NA	30626885	30644679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30643528
transcript_155067.known	chr6	+	1527	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	53.0253712858288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	5	False	NA	14	True	AATAAA	-23	NA	30626919	30646823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
transcript_155069.known	chr6	+	2646	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	37.513783475108	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	9	True	NA	53	True	AAAAAG	-17	NA	30626875	30644679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
transcript_155074.known	chr6	+	2611	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	62.2985503442897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	8995	False	NA	53	True	AAAAAG	-17	NA	30626841	30644679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
transcript_155075.known	chr6	+	718	8	FSM	ENSG00000137343.18	ENST00000493388.5	718	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_7	27.6767050061961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAAAGCAACCCAAG	0	True	NA	NA	False	NA	NA	NA	30626914	30640698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534
transcript_155087.known	chr6	-	3406	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_8	34.9078724185062	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	1	True	NA	-14	True	AATAAA	-44	NA	30673006	30653126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_155088.nic	chr6	-	3104	20	NIC	ENSG00000204560.10	novel	3406	20	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_19	60.2363764898884	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	9545	False	30673039	-14	True	AATAAA	-44	NA	30673025	30653126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672955
transcript_155102.known	chr6	+	1496	6	FSM	ENSG00000204564.12	ENST00000446773.6	1496	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	19.8595065396903	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	7	True	NA	25	True	AATAAA	-26	NA	30647420	30653109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30647847_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_155103.known	chr6	+	1402	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	19.2208220427743	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCAGGTTCTGTTT	36	False	NA	15	True	ATTAAA	-22	NA	30647072	30653210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_155111.known	chr6	-	2853	4	FSM	ENSG00000146112.12	ENST00000399199.7	2853	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	17.9133717900592	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	0	True	NA	-3	True	AATAAA	-17	NA	30687216	30676388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30686047_30687113
transcript_155113.known	chr6	-	4597	3	FSM	ENSG00000146112.12	ENST00000615527.1	4597	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTCTGCTTCTCCTTC	3529	False	NA	-5	True	AATAAA	-15	NA	30687895	30676390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30677289_30679178_30679390_30684407
transcript_155114.known	chr6	-	1156	3	FSM	ENSG00000146112.12	ENST00000467662.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	17	True	NA	-3	True	AATAAA	-17	NA	30687158	30676388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30677289_30679178_30679390_30687113
transcript_155115.known	chr6	-	1328	4	FSM	ENSG00000146112.12	ENST00000488324.1	1328	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.8325958557674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	4231	False	NA	-3	True	AATAAA	-17	NA	30687193	30676388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30684545_30687113
transcript_155116.known	chr6	-	1453	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	27.9205221218292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-14	True	NA	-4	True	AATAAA	-21	NA	30691002	30688046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
transcript_155117.known	chr6	-	1411	4	FSM	ENSG00000137404.15	ENST00000376421.7	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	10.6562449087639	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATGCAGTCTGTCAG	4	True	NA	-6	True	AATAAA	-19	NA	30690984	30688048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690841
transcript_155118.known	chr6	-	1029	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	14	True	NA	-4	True	AATAAA	-21	NA	30690974	30688046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30688943_30690841
transcript_15512.known	chr1	-	3303	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-5	True	NA	-25	True	GATAAA	-21	NA	156728435	156721890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156723463_156724147_156724349_156726905
transcript_155129.known	chr6	+	2624	4	FSM	ENSG00000196230.14	ENST00000681435.1	2624	4	0	0	0	0	multi-exon	FALSE	canonical	1	249	junction_1	5905.3454316125	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCAACCAACTGGATATT	-3	True	NA	NA	False	NA	NA	NA	30717434	30725538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30717640_30722536_30722646_30722917_30723029_30723339
transcript_155131.known	chr6	+	2632	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_1	5560.76711334766	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	-8	True	NA	36	True	AATAAA	-20	NA	30721573	30725426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
transcript_155136.known	chr6	+	2903	4	FSM	ENSG00000196230.14	ENST00000396389.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	2	459	junction_1	5806.35554084201	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	23	False	NA	36	True	AATAAA	-20	NA	30721666	30725426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30722263_30722536_30722646_30722917_30723029_30723339
transcript_155137.known	chr6	+	2823	4	FSM	ENSG00000196230.14	ENST00000396384.1	2823	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6022.71937472324	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	55	False	NA	36	True	AATAAA	-20	NA	30721698	30725426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30722215_30722536_30722646_30722917_30723029_30723339
transcript_155138.known	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	12703	junction_2	590.579940961989	4781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	-2	True	NA	32	True	AATAAA	-16	NA	30720351	30725422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
transcript_155139.known	chr6	+	3209	3	FSM	ENSG00000196230.14	ENST00000680530.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	3	12703	junction_1	72.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTGAAAAAAGCTGCGA	36	False	NA	19	True	AATAAA	-3	NA	30721617	30725409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30722646_30722917_30723029_30723339
transcript_155148.nic	chr6	-	1649	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-7	-121	combination_of_known_junctions	FALSE	canonical	3	121	junction_12	165.909781373961	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	2014	False	NA	-16	True	ATTAAA	-14	NA	30742531	30727829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
transcript_155149.known	chr6	-	1866	13	FSM	ENSG00000137312.15	ENST00000376389.8	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_9	57.1639941066247	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-4	True	NA	-13	True	AATAAA	-22	NA	30742687	30727708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526
transcript_155177.known	chr6	-	1237	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	-2	True	NA	-19	True	AATAAA	-19	NA	30744547	30743198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30744197_30744308
transcript_155178.known	chr6	-	1350	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	-3	True	NA	-19	True	AATAAA	-19	NA	30744548	30743198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30743200_30744500
transcript_155179.known	chr6	+	527	2	FSM	ENSG00000272273.2	ENST00000607333.2	573	2	0	46	0	-43	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTTGCATAAGTTAAAA	-8	True	NA	25	True	AATAAA	-40	NA	30742928	30743592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30743097_30743233
transcript_15518.known	chr1	-	872	2	FSM	ENSG00000143319.17	ENST00000496538.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGGAAAAAGTCCTA	1447	False	NA	NA	False	NA	NA	NA	156727386	156723957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156724349_156726905
transcript_155190.nnic	chr6	-	1418	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-144	238	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	79.1496472933813	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGACTCCAAAAGGCCT	NA	False	NA	NA	False	AAAAAG	-9	NA	30848303	30839287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_30840020_30843377_30843615_30847036_30847150_30847967
transcript_155196.known	chr6	-	799	3	FSM	ENSG00000237923.1	ENST00000442852.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	53	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGGAGTTCGAGACCAG	88	False	NA	NA	False	NA	NA	NA	30848159	30839525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30840020_30847036_30847150_30847967
transcript_155199.nic	chr6	-	446	2	ISM	ENSG00000237923.1	ENST00000442852.1	799	3	-144	7514	-144	-7514	5prime_fragment	FALSE	canonical	3	184	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTAACTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	30848303	30847039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_30847150_30847967
transcript_155208.known	chr6	+	4148	20	FSM	ENSG00000204580.14	ENST00000324771.12	4148	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	219.440411462487	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGAGTGGGTTCCT	4425	False	NA	23	True	AATAAA	-16	NA	30880848	30900154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30881126_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_15522.nic	chr1	-	960	6	NIC	ENSG00000143314.12	novel	883	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	117.536377347611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGCTGCT	8	True	NA	-13	True	AATAAA	-15	NA	156741086	156737304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156740930
transcript_15523.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_5	74.666190474672	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	6	True	NA	-11	True	AATAAA	-17	NA	156741088	156737302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
transcript_15524.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	0	0	0	multi-exon	FALSE	canonical	2	123	junction_5	79.5547610140336	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGCTGCT	2	True	NA	-13	True	AATAAA	-15	NA	156741131	156737304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
transcript_155244.known	chr6	+	3820	19	FSM	ENSG00000204580.14	ENST00000376570.8	3820	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	219.125534796837	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTGTGAGTGGGTTC	-11	True	NA	21	True	AATAAA	-14	NA	30884083	30900152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30884146_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155253.nic	chr6	+	4017	18	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	168.801330780762	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	4329	False	NA	25	True	AATAAA	-18	NA	30880752	30900156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30881126_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155266.nic	chr6	+	3717	18	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	155.758818975303	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	1827	False	NA	25	True	AATAAA	-18	NA	30882910	30900156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155279.known	chr6	+	3783	18	FSM	ENSG00000204580.14	ENST00000376569.7	3783	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	188.779030857109	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	-26	True	NA	25	True	AATAAA	-18	NA	30884068	30900156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30884146_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155285.known	chr6	+	3836	18	FSM	ENSG00000204580.14	ENST00000376568.8	3836	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	154.366234183695	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	-25	True	NA	25	True	AATAAA	-18	NA	30884518	30900156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155291.nic	chr6	+	3906	17	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	159.230461419133	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	4329	False	NA	25	True	AATAAA	-18	NA	30880752	30900156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30881126_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155296.known	chr6	+	3588	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	143.827030991222	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	1529	False	NA	NA	False	NA	NA	NA	30882612	30899840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155304.nic	chr6	+	3726	17	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	161.215972669429	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	31	False	NA	25	True	AATAAA	-18	NA	30882972	30900156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30883166_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_155338.known	chr6	+	3575	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.2830563053745	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	-20	True	NA	17	True	GATAAA	-17	NA	30914237	30926459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_155341.known	chr6	+	3566	30	FSM	ENSG00000137411.19	ENST00000541562.6	3566	30	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	28.8315869192214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTGGGAATGAGGAGA	73	False	NA	-29	True	NA	NA	NA	30914330	30926413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30914470_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_155353.known	chr6	+	3362	29	FSM	ENSG00000137411.19	ENST00000625423.2	3362	29	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	29.5587231159416	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTCTGTTTATGGCT	-38	True	NA	14	True	GATAAA	-14	NA	30914219	30926456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30914345_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_155370.known	chr6	+	1712	14	FSM	ENSG00000213780.11	ENST00000259895.9	1712	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.41857423549425	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	0	True	NA	40	True	AATAAA	-17	NA	30908206	30914106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_155372.known	chr6	+	1673	14	FSM	ENSG00000213780.11	ENST00000376316.5	1673	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.91976065696355	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	14	True	NA	40	True	AATAAA	-17	NA	30908220	30914106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30908379_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_155378.nic	chr6	+	2001	13	NIC	ENSG00000213780.11	novel	1712	14	NA	NA	-43	0	intron_retention	FALSE	canonical	3	19	junction_3	5.57462006677486	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	443	False	NA	40	True	AATAAA	-17	NA	30908163	30914106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_155387.known	chr6	-	868	2	FSM	ENSG00000204538.4	ENST00000259845.5	868	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATCTAGGCTGCTGC	1	True	NA	NA	False	AATAAA	-17	NA	31139066	31137533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31138307_31138971
transcript_155391.known	chr6	-	2684	19	FSM	ENSG00000204536.15	ENST00000652535.1	2684	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	46.1088352852035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTACAGAAGGAGCCATTG	-34	True	NA	-25	True	AATAAA	-4	NA	31158214	31142451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31148891_31148988_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_155394.nic	chr6	-	2894	19	NIC	ENSG00000204536.15	novel	2971	18	NA	NA	-153	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_18	38.6580450158107	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8367	False	NA	-12	True	AATAAA	-17	NA	31158391	31142438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384_31157501_31158166
transcript_155407.known	chr6	-	2625	18	FSM	ENSG00000204536.15	ENST00000376266.9	2625	18	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	23.359385686571	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8520	False	NA	-12	True	AATAAA	-17	NA	31158238	31142438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_155416.nic	chr6	-	2843	18	NIC	ENSG00000204536.15	novel	2971	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	15	junction_17	39.286455751777	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8514	False	NA	-12	True	AATAAA	-17	NA	31158244	31142438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384_31157501_31158166
transcript_155442.nic	chr6	-	2952	17	NIC	ENSG00000204536.15	novel	2625	18	NA	NA	-231	0	intron_retention	FALSE	canonical	3	72	junction_16	22.4804602655284	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8289	False	NA	-12	True	AATAAA	-17	NA	31158469	31142438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_155444.nnic	chr6	-	2505	17	NIC	ENSG00000204536.15	novel	2625	18	NA	NA	-3	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_3	36	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8538	False	NA	-12	True	AATAAA	-17	NA	31158220	31142438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_155480.known	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1707.84820754071	3790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	-2	True	NA	-5	True	AATAAA	-33	NA	31170682	31164336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
transcript_155483.known	chr6	+	3039	4	FSM	ENSG00000137310.12	ENST00000376255.4	3039	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	19.2006944318862	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	-22	True	NA	29	True	AATAAA	-17	NA	31158546	31164215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31158723_31159142_31159708_31161446_31162006_31162476
transcript_155485.known	chr6	+	3243	4	FSM	ENSG00000137310.12	ENST00000376257.8	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	17.7951304200522	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	20	True	NA	29	True	AATAAA	-17	NA	31158588	31164215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31158723_31158896_31159708_31161446_31162006_31162476
transcript_155496.known	chr6	-	2838	1	FSM	ENSG00000272501.1	ENST00000606367.1	2838	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCCTATTTATCC	NA	False	NA	NA	False	AATAAA	-22	NA	31198037	31195199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31195200_31198000
transcript_155501.known	chr6	-	1880	6	FSM	ENSG00000204525.18	ENST00000487245.5	1880	6	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_4	121.485143124581	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	1038	False	NA	-10	True	AATAAA	-21	NA	31272050	31268748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072
transcript_155502.known	chr6	-	1554	8	FSM	ENSG00000204525.18	ENST00000383329.7	1554	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	319.005917672704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	1	True	NA	-10	True	AATAAA	-21	NA	31272086	31268748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_155504.known	chr6	-	1536	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_7	122.365961653675	1363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGCATGTTCGCTGTG	-3	True	NA	-9	True	AATAAA	-18	NA	31357179	31353874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
transcript_155512.known	chr6	+	9148	2	FSM	ENSG00000206337.12	ENST00000414046.3	9148	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAATGATTAAGACTT	NA	False	NA	NA	False	TATAAA	-22	NA	31463169	31472408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31463280_31463370
transcript_155513.known	chr6	+	1370	6	FSM	ENSG00000204520.14	ENST00000449934.7	1370	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.0876161703348	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCATTGTTTTTGTT	7	True	NA	8	True	NA	NA	NA	31403594	31415315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31403703_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_155514.known	chr6	+	2411	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.6698549067321	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-4	NA	31494880	31511123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_155515.known	chr6	+	2416	6	FSM	ENSG00000204516.10	ENST00000252229.7	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	10.6207344378814	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	-4	True	NA	NA	False	AATAGA	-1	NA	31498144	31511124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31498264_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_155516.known	chr6	-	2068	2	FSM	ENSG00000286940.1	ENST00000665353.1	2068	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGCCATGAGTAAAA	3042	False	NA	NA	False	AATAAA	-22	NA	31494935	31479972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31481359_31494253
transcript_15552.known	chr1	+	2068	7	FSM	ENSG00000143294.15	ENST00000271526.9	2068	7	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_1	147.231582511664	4436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	-3	True	NA	17	True	AATAAA	-18	NA	156767534	156800815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156768240_156782281_156782330_156786607_156787175_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_155534.known	chr6	-	1681	11	FSM	ENSG00000198563.14	ENST00000396172.6	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_10	255.532561525924	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-7	True	NA	-9	True	ACTAAA	-25	NA	31542003	31530225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_155548.nic	chr6	-	4168	10	NIC	ENSG00000198563.14	novel	1681	11	NA	NA	-17	0	intron_retention	FALSE	canonical	3	842	junction_9	266.150333458367	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	5496	False	NA	-9	True	ACTAAA	-25	NA	31542035	31530225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_155562.known	chr6	+	1411	4	FSM	ENSG00000204498.11	ENST00000376146.8	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	19.1891172861657	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	15	False	NA	31	True	NA	NA	NA	31546869	31558829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31546974_31548162_31548440_31557627_31557850_31558021
transcript_155563.known	chr6	+	1401	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	26.0426999794995	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	11	True	NA	31	True	NA	NA	NA	31547612	31558829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
transcript_155564.known	chr6	+	1451	4	FSM	ENSG00000204498.11	ENST00000376148.9	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	17.9691092959247	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	6	True	NA	31	True	NA	NA	NA	31547607	31558829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557850_31558021
transcript_155566.known	chr6	+	700	3	FSM	ENSG00000204498.11	ENST00000473655.1	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGCCCATCACCTTCTC	59	False	NA	NA	False	NA	NA	NA	31547660	31557959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31547752_31548162_31548440_31557627
transcript_155567.known	chr6	-	4027	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_9	355.807931264351	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	5514	False	NA	-2	True	ACTAAA	-32	NA	31542017	31530218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_155568.known	chr6	-	2003	11	FSM	ENSG00000198563.14	ENST00000458640.5	2003	11	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_10	338.730512354585	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	5083	False	NA	-2	True	ACTAAA	-32	NA	31542448	31530218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_155569.known	chr6	-	974	4	FSM	ENSG00000198563.14	ENST00000474961.5	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	1563	junction_3	134.345326180953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	10008	False	NA	-2	True	ACTAAA	-32	NA	31531744	31530218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295
transcript_155570.known	chr6	-	1370	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTGCCTCATCATTT	-15	True	NA	0	True	AATAAA	-38	NA	31546608	31544443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31545582_31546108_31546210_31546477
transcript_155571.known	chr6	-	1388	2	FSM	ENSG00000227507.3	ENST00000482429.1	1388	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGAAATTGATTTTG	5699	False	NA	-70	True	NA	NA	NA	31582406	31580623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31581164_31581558
transcript_155572.known	chr6	-	853	3	FSM	ENSG00000227507.3	ENST00000446745.2	853	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTTGCGACACACGTC	-5	True	NA	-1	True	AATAAA	-33	NA	31582427	31580554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31581164_31581558_31581631_31582255
transcript_155573.known	chr6	-	893	4	FSM	ENSG00000227507.3	ENST00000429299.3	893	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGAGTTGCGACACAC	-2	True	NA	-4	True	AATAAA	-30	NA	31582424	31580557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31581164_31581558_31581631_31581813_31581860_31582255
transcript_155574.known	chr6	+	655	6	FSM	ENSG00000204472.13	ENST00000376059.8	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33.7283263741325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	-33	True	NA	8	True	AATAAA	-16	NA	31615233	31617015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31615355_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_155575.known	chr6	+	524	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	-6	True	NA	14	True	AATAAA	-22	NA	31615990	31617021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31616146_31616343_31616507_31616815
transcript_155583.known	chr6	+	6861	31	FSM	ENSG00000204469.13	ENST00000376007.8	6861	31	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	159.458946301409	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	3	True	NA	30	True	AATAAA	-19	NA	31620719	31637771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31620859_31622726_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626981_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
transcript_155586.known	chr6	+	6903	31	FSM	ENSG00000204469.13	ENST00000376033.3	6903	31	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	162.043303540203	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	-2	True	NA	30	True	AATAAA	-19	NA	31620714	31637771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31620859_31622689_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626981_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
transcript_1556.known	chr1	+	2385	18	FSM	ENSG00000067606.17	ENST00000378567.8	2385	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	14.4756088851266	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCTGATGCCTTTTTT	-11	True	NA	34	True	AATAAA	-20	NA	2050410	2185395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2050702_2055440_2055563_2056483_2056574_2059540_2059592_2135261_2135348_2144209_2144342_2146026_2146109_2148871_2148925_2150789_2150979_2155994_2156093_2169517_2169605_2172054_2172191_2172300_2172389_2173896_2174017_2174753_2174834_2175223_2175314_2184582_2184699_2184921
transcript_155604.nic	chr6	+	2672	12	ISM	ENSG00000204469.13	ENST00000376007.8	6861	31	-64	8891	-59	-888	5prime_fragment	FALSE	canonical	3	196	junction_1	44.5369194049459	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTATTTCCTATAGG	516	False	NA	NA	False	AATAAA	-3	NA	31620655	31628880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_31620859_31622726_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626981_31627199_31627764
transcript_155624.nic	chr6	-	3777	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_14	81.6837413442847	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-23	True	NA	-13	True	AATAAA	-31	NA	31652418	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_155627.known	chr6	-	3887	26	FSM	ENSG00000204463.14	ENST00000676615.2	3843	26	-44	0	0	0	multi-exon	FALSE	canonical	3	112	junction_25	82.7801908671392	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_155633.known	chr6	-	3920	26	FSM	ENSG00000204463.14	ENST00000676571.1	3920	26	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	94.8822090805226	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644228_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_155649.known	chr6	-	3644	25	FSM	ENSG00000204463.14	ENST00000375976.8	3644	25	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_24	68.2463750563598	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	2	True	NA	-13	True	AATAAA	-31	NA	31652393	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_155651.nic	chr6	-	3831	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_24	78.9976155582489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8029	False	NA	-13	True	AATAAA	-31	NA	31652733	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
transcript_155652.known	chr6	-	3779	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_24	69.6828006636741	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_155653.nic	chr6	-	3703	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_24	79.8595011915023	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8044	False	NA	-13	True	AATAAA	-31	NA	31652718	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652512
transcript_155664.nic	chr6	-	3629	25	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_13	86.1125615917265	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	-23	True	NA	-14	True	AATAAA	-30	NA	31652418	31639028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_155684.known	chr6	-	3701	24	FSM	ENSG00000204463.14	ENST00000375964.11	3701	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	92.9211711364457	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_15569.nic	chr1	+	2170	6	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-198	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	477.373396828939	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	140	False	NA	17	True	AATAAA	-18	NA	156767336	156800815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156794664_156794809_156797275_156797342_156800373
transcript_155704.nic	chr6	-	3521	24	NIC	ENSG00000204463.14	novel	3626	24	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_23	74.2825546181936	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	-23	True	NA	-14	True	AATAAA	-30	NA	31652418	31639028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_155705.nic	chr6	-	3683	24	NIC	ENSG00000204463.14	novel	3626	24	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_23	84.3364402893585	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	8029	False	NA	-14	True	AATAAA	-30	NA	31652733	31639028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
transcript_155706.known	chr6	-	3626	24	FSM	ENSG00000204463.14	ENST00000362049.10	3626	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_23	75.6064829538465	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	8062	False	NA	-14	True	AATAAA	-30	NA	31652700	31639028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_15580.known	chr1	-	966	6	FSM	ENSG00000143321.19	ENST00000482651.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	664.093969254352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCTGGGGCCTGGGAC	4997	False	NA	NA	False	NA	NA	NA	156747471	156743155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156747434
transcript_155808.known	chr6	+	709	6	FSM	ENSG00000204444.11	ENST00000375920.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.77493455452533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-21	True	NA	10	True	AATAAA	-20	NA	31652416	31658210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_155811.known	chr6	-	609	4	FSM	ENSG00000204463.14	ENST00000464126.1	609	4	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_2	66.0824400948459	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8748	False	NA	-13	True	AATAAA	-31	NA	31640539	31639027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384
transcript_155812.known	chr6	+	761	6	FSM	ENSG00000204444.11	ENST00000375916.4	761	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.09945053286186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-1	True	NA	10	True	AATAAA	-20	NA	31655893	31658210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31656081_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_155813.known	chr6	-	2481	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTTTAGGTGGTAGA	-16	True	NA	30	True	NA	NA	NA	31660778	31658297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31658300_31660800
transcript_155817.known	chr6	+	1061	7	FSM	ENSG00000204435.15	ENST00000375885.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	414.830788796267	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	-17	True	NA	17	True	AATAAA	-20	NA	31665235	31670070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31665494_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_155819.known	chr6	+	929	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_6	58.7038234605625	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	-11	True	NA	14	True	AATAAA	-17	NA	31666079	31670067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_15582.known	chr1	-	2309	6	FSM	ENSG00000143321.19	ENST00000357325.10	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	1541	junction_4	65.6731299695697	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATTCTGACTGATTC	3	True	NA	-6	True	AATAAA	-16	NA	156751675	156742108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
transcript_155821.known	chr6	+	908	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	417.786395448945	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	158	False	NA	17	True	AATAAA	-20	NA	31666291	31670070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_155829.nnic	chr6	-	1725	4	NNC	ENSG00000204438.11	novel	1800	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	80.8675185445649	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	2731	False	NA	-8	True	AATAAA	-28	NA	31665871	31662075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_31662711_31663852_31664578_31664840_31664908_31665573
transcript_155832.known	chr6	-	1800	4	FSM	ENSG00000204438.11	ENST00000375895.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	64.5101197918246	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	9	True	NA	-8	True	AATAAA	-28	NA	31665850	31662075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665573
transcript_155833.known	chr6	-	2793	4	FSM	ENSG00000204438.11	ENST00000375906.5	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	74.7187318474349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTACACTTTTCTTT	2319	False	NA	NA	False	TTTAAA	-17	NA	31666283	31661228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665860
transcript_155835.nnic	chr6	-	1728	4	NNC	ENSG00000204438.11	novel	1814	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	80.8551516945925	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	2731	False	NA	-8	True	AATAAA	-28	NA	31665871	31662075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_31662711_31663852_31664581_31664840_31664908_31665573
transcript_155838.known	chr6	-	1814	4	FSM	ENSG00000204438.11	ENST00000375900.8	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	65.1272259163213	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-2	True	NA	-8	True	AATAAA	-28	NA	31665861	31662075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665573
transcript_15584.known	chr1	-	2171	6	FSM	ENSG00000143321.19	ENST00000368209.9	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	649.364489327835	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	-1	True	NA	-7	True	AATAAA	-15	NA	156752233	156742109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752037
transcript_15585.known	chr1	-	960	6	FSM	ENSG00000143321.19	ENST00000368206.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	635.434213746789	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTCCTCTTCTAC	-20	True	NA	NA	False	NA	NA	NA	156752448	156743344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752228
transcript_155850.known	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375866.2	936	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	418.894842280123	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	221	False	NA	17	True	AATAAA	-20	NA	31666354	31670070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31666488_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_155851.known	chr6	-	836	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTAAACTGTTTGGT	-16	True	NA	-17	True	AATAAA	-2	NA	31681476	31676699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31677121_31679100_31679269_31681229
transcript_155852.known	chr6	-	2332	22	FSM	ENSG00000204422.7	ENST00000461287.1	2332	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	93.4680514614001	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCAGGCTAATTGTATA	-5	True	NA	-11	True	AATAAA	-15	NA	31714072	31686961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31712016_31712116_31712663_31712790_31713760
transcript_155857.known	chr6	-	2260	20	FSM	ENSG00000204427.12	ENST00000492084.5	2260	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_19	60.8591762611034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	250	False	NA	-8	True	AATAAA	-18	NA	31703073	31686958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31702611
transcript_155858.known	chr6	-	1977	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	23.2023496756452	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	-1	True	NA	-4	True	AATAAA	-22	NA	31703324	31686954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
transcript_155865.known	chr6	-	1892	19	FSM	ENSG00000204427.12	ENST00000495769.5	1892	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	61.8619779912319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTAATAAAAAGGTAT	-17	True	NA	-38	True	NA	NA	NA	31703340	31686988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702073_31702131_31703149
transcript_155873.known	chr6	-	1906	18	FSM	ENSG00000204427.12	ENST00000440843.2	1906	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	65.4147269748205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGGTGAGAGGAGACAT	253	False	NA	NA	False	NA	NA	NA	31703070	31687185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702611
transcript_155874.nic	chr6	-	1878	18	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	59.6438100983244	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-30	True	NA	-8	True	AATAAA	-18	NA	31703353	31686958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
transcript_155900.known	chr6	+	402	3	FSM	ENSG00000244355.8	ENST00000375825.8	525	3	8	115	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	9	False	NA	NA	False	NA	NA	NA	31715355	31717804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31715411_31715501_31715625_31717580
transcript_155906.known	chr6	+	2708	25	FSM	ENSG00000204410.16	ENST00000375703.7	2708	25	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_9	13.5205604749047	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	29	False	NA	NA	False	AATAAA	-17	NA	31740020	31762676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761184_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
transcript_155920.known	chr6	-	1235	7	FSM	ENSG00000213722.10	ENST00000416410.6	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	231.714383575029	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	7	True	NA	-5	True	AATAAA	-20	NA	31729796	31727037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729682
transcript_155921.known	chr6	-	1098	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	1084.24705056858	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGGATTTAAAGTGTGG	-18	True	NA	-7	True	AATAAA	-31	NA	31736545	31730582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
transcript_155923.known	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	1117.070573718	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1482	False	NA	-5	True	AATAAA	-33	NA	31736572	31730580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
transcript_155924.known	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	236.635077704046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	10	True	NA	-5	True	AATAAA	-20	NA	31730227	31727037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
transcript_155925.known	chr6	-	1254	6	FSM	ENSG00000213719.8	ENST00000375784.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	3	2724	junction_2	248.024514917377	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1487	False	NA	-5	True	AATAAA	-33	NA	31736567	31730580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
transcript_155927.known	chr6	-	898	5	FSM	ENSG00000213722.10	ENST00000483792.1	898	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	310.52576382645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-25	True	NA	-5	True	AATAAA	-20	NA	31730262	31727037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728645_31728746_31730050
transcript_15594.known	chr1	+	2701	16	FSM	ENSG00000198400.13	ENST00000368196.7	2701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.711805216802088	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCTTGCCAGTTA	NA	False	NA	NA	False	NA	NA	NA	156860814	156881850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156861147_156864353_156864429_156864727_156864800_156866909_156866979_156868103_156868250_156868504_156868648_156871622_156871756_156873632_156873960_156874570_156874627_156874905_156875009_156875519_156875667_156876079_156876211_156876399_156876573_156879121_156879363_156879998_156880158_156881456
transcript_155943.known	chr6	-	4111	30	FSM	ENSG00000204394.13	ENST00000375663.8	4111	30	0	0	0	0	multi-exon	TRUE	canonical	3	531	junction_25	88.5488102431736	1487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTCGTCTGTGGTG	-53	True	NA	-1	True	AATAAA	-17	NA	31795752	31777517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
transcript_15595.known	chr1	-	1644	9	FSM	ENSG00000027869.12	ENST00000368199.8	1644	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	19.2613602842582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	1	True	NA	-8	True	AATAAA	-30	NA	156816848	156806242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847_156814017_156814204_156814295_156815036_156815222_156816005_156816095_156816674
transcript_15598.nic	chr1	-	1199	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2724	1	1	0	3prime_fragment	FALSE	canonical	3	24	junction_3	8.61321658847611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAGTCCTCCAGGCTCC	3	True	NA	-9	True	AATAAA	-29	NA	156814110	156806243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
transcript_15600.known	chr1	-	5282	5	FSM	ENSG00000117036.12	ENST00000368192.9	5282	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.58602010819715	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGAGAGTTGGTTT	-1	True	NA	-5	True	AATAAA	-18	NA	157138395	157121190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_157125980_157134111_157134228_157135470_157135709_157136306_157136366_157138315
transcript_156005.known	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	424.092265904485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8948	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
transcript_156007.known	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_3	61.9213210453395	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-2	True	NA	-6	True	AATAAA	-15	NA	31806966	31797395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
transcript_156008.known	chr6	-	641	4	FSM	ENSG00000204392.11	ENST00000470083.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	444.697899952566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	24	True	NA	-6	True	AATAAA	-15	NA	31806817	31797395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806754
transcript_156009.known	chr6	-	713	4	FSM	ENSG00000204392.11	ENST00000470086.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	468.175892872184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-11	True	NA	-6	True	AATAAA	-15	NA	31806852	31797395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31806074_31806143_31806754
transcript_156011.known	chr6	-	767	3	FSM	ENSG00000204392.11	ENST00000477182.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	520	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-2	True	NA	-6	True	AATAAA	-15	NA	31806966	31797395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31806074_31806143_31806754
transcript_156012.known	chr6	-	767	5	FSM	ENSG00000204392.11	ENST00000493387.5	767	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	424.092265904485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8947	False	NA	-6	True	AATAAA	-15	NA	31806660	31797395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806122_31806518
transcript_156013.known	chr6	+	2400	1	FSM	ENSG00000204389.10	ENST00000375651.7	2400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTTTTATTCCTTT	0	True	NA	14	True	AATAAA	-14	NA	31815542	31817942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31815500_31817900
transcript_156015.known	chr6	+	847	5	FSM	ENSG00000204387.14	ENST00000375638.7	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	236.845941489399	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31835201_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_156018.known	chr6	+	602	4	FSM	ENSG00000204387.14	ENST00000375641.6	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	271.146127064766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	12	True	NA	16	True	AATAAA	-16	NA	31834626	31839761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31834769_31835410_31835452_31837235_31837436_31839542
transcript_156019.known	chr6	+	1053	4	FSM	ENSG00000204387.14	ENST00000375640.7	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	157.073938711112	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	-7	True	NA	16	True	AATAAA	-16	NA	31834607	31839761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31835201_31835410_31835452_31837235_31837436_31839542
transcript_156020.known	chr6	+	610	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	260.750625864808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
transcript_156021.known	chr6	+	2517	1	FSM	ENSG00000204388.7	ENST00000375650.5	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTTAATATGTG	-1	True	NA	9	True	AATAAA	-13	NA	31827737	31830254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31827700_31830300
transcript_156022.known	chr6	+	962	5	FSM	ENSG00000204387.14	ENST00000375642.6	962	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	258.400367646797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	-2	True	NA	16	True	AATAAA	-16	NA	31834917	31839761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31835201_31835410_31835452_31836298_31836518_31837235_31837436_31839542
transcript_156024.known	chr6	-	1875	6	FSM	ENSG00000204386.12	ENST00000491768.5	1875	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	114.45802724143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTCTTTTTTTGTTG	6	True	NA	-4	True	NA	NA	NA	31862822	31859051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31859946_31860041_31860179_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_156025.known	chr6	-	3353	6	FSM	ENSG00000204386.12	ENST00000375631.5	3353	6	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	34.6444800798049	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	7	True	NA	NA	False	NA	NA	NA	31862821	31857658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31859946_31860041_31860265_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_156028.known	chr6	-	2338	5	FSM	ENSG00000204386.12	ENST00000678869.1	2338	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	127.114121953464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGAATATTTGTAGAG	-1	True	NA	-43	True	AATGAA	-2	NA	31862884	31859216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31859946_31860041_31860179_31860438_31861451_31861998_31862192_31862617
transcript_156034.known	chr6	-	2214	4	FSM	ENSG00000204386.12	ENST00000480384.1	2214	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	34.1207007873845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTCTTTTTTTGTTG	6414	False	NA	-4	True	NA	NA	NA	31862805	31859051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31860622_31861187_31861451_31861998_31862192_31862617
transcript_156038.known	chr6	-	4616	3	FSM	ENSG00000204386.12	ENST00000495807.1	4616	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	6423	False	NA	NA	False	NA	NA	NA	31862796	31857658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31859946_31860041_31862192_31862617
transcript_156046.nic	chr6	-	4033	28	NIC	ENSG00000204371.11	novel	3965	28	NA	NA	-44	0	intron_retention	FALSE	canonical	3	88	junction_9	186.490061960086	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	4346	False	NA	NA	False	AATAAA	-20	NA	31897731	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_156050.known	chr6	-	3965	28	FSM	ENSG00000204371.11	ENST00000375537.8	3965	28	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_19	120.153297145001	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	7	True	NA	NA	False	AATAAA	-20	NA	31897684	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_156060.nic	chr6	-	3931	27	NIC	ENSG00000204371.11	novel	3965	28	NA	NA	-44	0	intron_retention	FALSE	canonical	3	88	junction_9	212.940587458057	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	4346	False	NA	NA	False	AATAAA	-20	NA	31897731	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_156068.known	chr6	-	3856	27	FSM	ENSG00000204371.11	ENST00000375530.8	3856	27	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_18	156.696749493329	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	14	True	NA	NA	False	AATAAA	-20	NA	31897677	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_15607.known	chr1	+	7448	15	FSM	ENSG00000183853.18	ENST00000359209.11	7448	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	12.1873135778521	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTTGTGTTATTTAA	12	True	NA	NA	False	TATAAA	-21	NA	157993644	158100262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_157993729_158076112_158076263_158077990_158078141_158084421_158084580_158086595_158086747_158087754_158087861_158088005_158088155_158088326_158088455_158089501_158089629_158089717_158089819_158091357_158091557_158093338_158093447_158093622_158093763_158094312_158094391_158094643
transcript_156119.known	chr6	-	2585	21	FSM	ENSG00000204385.13	ENST00000229729.11	2585	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.2649655434629	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	0	True	NA	-22	True	ATTAAA	-23	NA	31878997	31863191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874720_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
transcript_15614.known	chr1	+	3607	7	FSM	ENSG00000158473.8	ENST00000368171.5	3607	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.90410505906933	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCCTTCAAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	158178029	158186427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_158178069_158180818_158181163_158181454_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
transcript_156142.nic	chr6	-	993	8	ISM	ENSG00000204371.11	ENST00000375537.8	3965	28	-47	9769	-44	2890	5prime_fragment	FALSE	canonical	3	762	junction_1	78.5693506218733	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGGAGGAAGAGGAAGA	4346	False	NA	NA	False	NA	NA	NA	31897731	31889527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_156147.known	chr6	-	1454	4	FSM	ENSG00000204371.11	ENST00000465429.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_3	89.7118845093682	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAGAT	4	True	NA	NA	False	NA	NA	NA	31897687	31895400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31896517_31896605_31896825_31896922_31896990_31897635
transcript_156151.known	chr6	-	4129	27	FSM	ENSG00000204371.11	ENST00000395728.7	4129	27	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_19	121.043643407936	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	18	True	NA	NA	False	AATAAA	-20	NA	31897202	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
transcript_156152.known	chr6	-	4047	26	FSM	ENSG00000204371.11	ENST00000375528.8	4047	26	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_18	158.854177156284	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-2	True	NA	NA	False	AATAAA	-20	NA	31897222	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
transcript_156153.known	chr6	-	1517	9	FSM	ENSG00000204371.11	ENST00000478491.5	1517	9	0	0	0	0	multi-exon	TRUE	canonical	3	823	junction_7	75.1880974622978	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	7747	False	NA	NA	False	AATAAA	-20	NA	31884806	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644
transcript_156154.known	chr6	-	1825	9	FSM	ENSG00000204371.11	ENST00000461880.5	1825	9	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_8	132.421615965823	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	7412	False	NA	NA	False	AATAAA	-20	NA	31885141	31879758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884800_31884911
transcript_156159.known	chr6	-	1445	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	0	0	0	multi-exon	TRUE	canonical	3	637	junction_10	94.5640523666367	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTCGCAGCTGTTTT	-13	True	NA	-3	True	NA	NA	NA	31958971	31952086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_156163.known	chr6	-	1543	10	FSM	ENSG00000204356.14	ENST00000481121.5	1543	10	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_9	99.4109813344408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-4	True	NA	-30	True	AGTAAA	-20	NA	31958962	31952227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_156169.known	chr6	+	3795	28	FSM	ENSG00000204351.12	ENST00000375394.7	3795	28	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	19.3224746006136	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	17	True	NA	21	True	GATAAA	-9	NA	31959174	31969751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279_31969421_31969514
transcript_15617.known	chr1	+	2883	12	FSM	ENSG00000163565.20	ENST00000295809.12	2883	12	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	3.77464354400485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCTTCCCCAGCAGTC	-19	True	NA	5	True	AATAAA	-24	NA	159009906	159055151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159010162_159014660_159014946_159015871_159015988_159016532_159016701_159018228_159018652_159020340_159020530_159032523_159032692_159045296_159045465_159049431_159049600_159051678_159052099_159053532_159053725_159054820
transcript_156179.nic	chr6	+	3951	27	ISM	ENSG00000204351.12	ENST00000375394.7	3795	28	-62	0	-4	0	intron_retention	FALSE	canonical	3	148	junction_9	19.5300178605432	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	7175	False	NA	21	True	GATAAA	-9	NA	31959112	31969751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279
transcript_15618.known	chr1	+	2704	11	FSM	ENSG00000163565.20	ENST00000368132.7	2704	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	4.00124980474851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCTTCCCCAGCAGTC	-8	True	NA	5	True	AATAAA	-24	NA	159009917	159055151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159010162_159014660_159014946_159015871_159015988_159016532_159016701_159018228_159018652_159020340_159020530_159032523_159032692_159049431_159049600_159051678_159052099_159053532_159053725_159054820
transcript_156222.known	chr6	+	1405	7	FSM	ENSG00000204344.16	ENST00000492583.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	31.5950945559592	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGGCTCTCGTGTGTGCA	101	False	NA	NA	False	NA	NA	NA	31971898	31981164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972512_31972620_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_156223.known	chr6	-	1115	7	FSM	ENSG00000204348.10	ENST00000474587.1	1115	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	56.5226110114842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATATGGTATGTGGAA	7	True	NA	NA	False	NA	NA	NA	31972098	31969947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971140_31971319_31971582_31971928
transcript_156225.known	chr6	-	1346	7	FSM	ENSG00000204348.10	ENST00000480240.5	1346	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	49.6199444668058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCCCAAGACTCCCTC	9	True	NA	-97	True	NA	NA	NA	31972136	31969906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971148_31971319_31971726_31971928
transcript_156227.known	chr6	-	1469	7	FSM	ENSG00000204348.10	ENST00000337523.10	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	21.1220001157298	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	7	True	NA	-5	True	AATAAA	-16	NA	31972138	31969814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971682_31971928
transcript_156228.known	chr6	-	1667	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_6	40.4162371111194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCGCTGTCTTCTTAG	6	True	NA	-3	True	AATAAA	-18	NA	31972290	31969812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
transcript_156230.known	chr6	+	1894	6	FSM	ENSG00000204344.16	ENST00000473983.5	1894	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	17.4241212116996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGGTTTCTGACCCAG	-18	True	NA	NA	False	NA	NA	NA	31972339	31981209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31979413_31980549_31980653_31980802_31981003
transcript_156231.known	chr6	+	1039	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	35.9888871736818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	23	True	NA	NA	False	NA	NA	NA	31972380	31981429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_156232.known	chr6	+	1128	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	17.6680502602862	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-22	True	NA	NA	False	AATAAA	-17	NA	31972554	31981446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_156233.nic	chr6	-	1663	6	NIC	ENSG00000204348.10	novel	1469	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	82	junction_4	20.1633330578057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTCTCTCGCTGTCTTC	-6	True	NA	-7	True	AATAAA	-14	NA	31972248	31969816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31971148_31971319_31971682_31971928
transcript_15624.known	chr1	+	2546	10	FSM	ENSG00000162706.13	ENST00000368124.8	2546	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	15.4160410283462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTTTCCTGCCCAA	-6	True	NA	28	True	ACTAAA	-16	NA	159171608	159202012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159171854_159189770_159189873_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_156244.known	chr6	+	725	3	FSM	ENSG00000204344.16	ENST00000484540.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAGGAGCTGGGATACC	1	True	NA	NA	False	NA	NA	NA	31972577	31979862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972758_31978902_31978999_31979413
transcript_156246.known	chr6	-	1878	5	FSM	ENSG00000204348.10	ENST00000485557.5	1878	5	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_4	20.2283835241474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCTGTCTTCTTAGCTG	33	True	NA	0	True	AATAAA	-21	NA	31972209	31969809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31971148_31971319
transcript_156247.known	chr6	-	2626	18	FSM	ENSG00000213676.13	ENST00000375203.8	2626	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	16.7499418993983	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCTGCCTTCCTGGCT	-23	True	NA	-2	True	AATAAA	-24	NA	32128246	32115263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_156248.known	chr6	-	2532	18	FSM	ENSG00000213676.13	ENST00000453203.2	2532	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	21.5376069262749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGGGGTGGGGGGGAGT	6	True	NA	-90	True	NA	NA	NA	32128217	32115351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117131_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_156255.known	chr6	-	2756	14	FSM	ENSG00000168477.19	ENST00000490077.5	2756	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	3.77472127581086	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATCGGTCCTGCCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	32046607	32041154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32041451_32041770_32041935_32042011_32042174_32042265_32042363_32042454_32042607_32042698_32042832_32042950_32043082_32043174_32043319_32043436_32043557_32043748_32043893_32044006_32044130_32044380_32044717_32045005_32045327_32046174
transcript_156257.known	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	8.66614336463034	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	1	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_156260.known	chr6	-	1020	7	FSM	ENSG00000213676.13	ENST00000485314.5	1020	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.15304987242334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTCCAGCCTGGGCG	-1	True	NA	NA	False	NA	NA	NA	32127767	32120508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670
transcript_156261.known	chr6	-	1342	2	FSM	ENSG00000204315.4	ENST00000375156.4	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTTGTGAATTGTGG	-23	True	NA	-12	True	ATTAAA	-20	NA	32130288	32128706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32129855_32130094
transcript_15628.known	chr1	+	3739	9	FSM	ENSG00000162706.13	ENST00000368125.9	3739	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	4.24264068711928	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTGTTCACTTCCT	0	True	NA	3	True	AATATA	-14	NA	159171614	159203313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159171854_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_156287.nic	chr6	+	1986	10	NIC	ENSG00000221988.13	novel	2111	10	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	68.7369291727436	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	NA	False	NA	15	True	AATAAA	-15	NA	32153501	32163675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_32153637_32154195_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_156292.known	chr6	+	1759	9	FSM	ENSG00000221988.13	ENST00000361568.6	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	50.5184062990906	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	-21	True	NA	18	True	AATAAA	-18	NA	32153522	32163678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32153637_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_156293.known	chr6	+	1754	9	FSM	ENSG00000221988.13	ENST00000375143.6	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	66.392300005347	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	-39	True	NA	18	True	AATAAA	-18	NA	32154137	32163678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32154247_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_156300.nic	chr6	-	2287	7	NIC	ENSG00000204310.13	novel	2196	7	NA	NA	-44	0	intron_retention	FALSE	canonical	2	13	junction_5	175.01182499731	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-31	True	NA	-30	True	AATAAA	-13	NA	32176128	32168211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171249_32171506_32175813
transcript_156302.known	chr6	-	2196	7	FSM	ENSG00000204310.13	ENST00000375107.8	2196	7	0	0	0	0	multi-exon	TRUE	canonical	3	333	junction_6	62.5639672655115	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	13	True	NA	-30	True	AATAAA	-13	NA	32176084	32168211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32175813
transcript_156303.known	chr6	-	2496	7	FSM	ENSG00000204310.13	ENST00000395499.5	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	142.577951388783	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	16	True	NA	-30	True	AATAAA	-13	NA	32177080	32168211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32176509
transcript_156304.known	chr6	-	2017	7	FSM	ENSG00000204310.13	ENST00000375104.6	2017	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	159.449835371505	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	15	True	NA	-30	True	AATAAA	-13	NA	32177325	32168211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32177233
transcript_156305.known	chr6	-	2021	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	180.795848649489	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	2	True	NA	-30	True	AATAAA	-13	NA	32178096	32168211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
transcript_156314.known	chr6	+	1312	9	FSM	ENSG00000241404.7	ENST00000395512.5	1312	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.7509101780889	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	4	True	NA	15	True	AATAAA	-17	NA	32164604	32168281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32164682_32166137_32166267_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
transcript_156315.known	chr6	+	1298	9	FSM	ENSG00000241404.7	ENST00000333845.11	1298	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	21.3834047803431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	-6	True	NA	15	True	AATAAA	-17	NA	32164594	32168281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32164658_32166137_32166267_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
transcript_156316.known	chr6	+	1117	6	FSM	ENSG00000204308.8	ENST00000375094.4	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_4	187.527704619877	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGGATCTCTTCCCAA	-17	True	NA	14	True	AATAAA	-15	NA	32178404	32180793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32178652_32179540_32179560_32179650_32179764_32179876_32179932_32180008_32180127_32180228
transcript_156325.known	chr6	-	3229	9	FSM	ENSG00000204304.12	ENST00000375050.6	3229	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	4.35710626448334	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-10	True	NA	-3	True	AATAAA	-22	NA	32190202	32184732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
transcript_156335.known	chr6	-	1417	4	FSM	ENSG00000213654.10	ENST00000472768.5	1417	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	44.0302926025556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	8	True	NA	0	True	AATAAA	-18	NA	32192885	32190765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191871_32192147_32192251_32192471
transcript_156336.known	chr6	-	1213	4	FSM	ENSG00000213654.10	ENST00000375040.8	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	4.08248290463863	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	8	True	NA	0	True	AATAAA	-18	NA	32192643	32190765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471
transcript_156339.known	chr6	-	1460	4	FSM	ENSG00000213654.10	ENST00000487761.5	1460	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	46.4781908234628	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	25	True	NA	0	True	AATAAA	-18	NA	32192868	32190765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192273_32192471
transcript_15634.known	chr1	+	694	3	FSM	ENSG00000158716.9	ENST00000368108.7	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	290	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	2	True	NA	29	True	AATAAA	-19	NA	159780959	159782543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159780994_159781098_159781368_159782152
transcript_156340.known	chr6	-	1456	8	FSM	ENSG00000213654.10	ENST00000375043.3	1456	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.9544852236079	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	884	False	NA	0	True	AATAAA	-18	NA	32195523	32190765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471_32192531_32193040_32193125_32194309_32194391_32194736_32194830_32195425
transcript_156341.known	chr6	+	1235	5	FSM	ENSG00000204287.14	ENST00000395388.7	1235	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.54950975679639	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	-6	True	NA	27	True	AATAAA	-25	NA	32439886	32445046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32440033_32442447_32442694_32443184_32443467_32443755_32443922_32444651
transcript_156342.known	chr6	-	1229	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	29.7563438614357	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	-5	True	NA	-27	True	ATTAAA	-24	NA	32589848	32578768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
transcript_156344.known	chr6	-	1642	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-37	0	-10	0	multi-exon	FALSE	canonical	3	12	junction_4	1.11803398874989	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAAGCCCAAATATAT	-19	True	NA	-2	True	AATAAA	-22	NA	32666694	32659466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
transcript_156348.known	chr6	-	5643	12	FSM	ENSG00000204267.17	ENST00000374897.4	5643	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.19348510368187	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGAAGTTCCATATT	26	True	NA	-4	True	ATTAAA	-25	NA	32838739	32825414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_15635.known	chr1	+	797	2	FSM	ENSG00000158716.9	ENST00000368107.2	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	4	True	NA	29	True	AATAAA	-19	NA	159780961	159782543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159781368_159782152
transcript_156353.nnic	chr6	-	2367	11	NIC	ENSG00000204267.17	novel	5643	12	NA	NA	-83	359	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	4.53982378512647	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTTCTTACATGAA	9265	False	NA	-42	True	AATACA	-13	NA	32838822	32828584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_156354.known	chr6	-	2509	12	FSM	ENSG00000204267.17	ENST00000652259.1	2509	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.55816404971697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTCTCTAAAAGTAT	26	True	NA	NA	False	ATTAAA	-13	NA	32838739	32821832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32822319_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_156356.known	chr6	-	2685	11	FSM	ENSG00000168394.12	ENST00000354258.5	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	17.6694651871527	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCTTATGTTTCC	9	True	NA	-5	True	AATAAA	-15	NA	32853704	32845208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32853038
transcript_156359.known	chr6	+	1017	6	FSM	ENSG00000240065.8	ENST00000374859.3	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.77174369109018	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTGATGGGACTCTTT	3	True	NA	NA	False	NA	NA	NA	32854191	32859851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32854290_32856137_32856206_32857262_32857395_32858004_32858135_32858363_32858506_32859404
transcript_156362.known	chr6	-	1124	6	FSM	ENSG00000204264.12	ENST00000374882.8	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	46.6021458733394	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-23	True	NA	NA	False	AATAAA	-19	NA	32844047	32840716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843849
transcript_156363.known	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	43.5642054902876	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-12	True	NA	NA	False	AATAAA	-19	NA	32844679	32840716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
transcript_156365.known	chr6	-	1153	5	FSM	ENSG00000204264.12	ENST00000484003.1	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	47.1858029496161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGTAGAAAGTACAGAT	16	True	NA	NA	False	NA	NA	NA	32844651	32841020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32843090_32844278
transcript_156367.known	chr6	-	2170	11	FSM	ENSG00000168394.12	ENST00000645078.1	2170	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	37.4245908461268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGGTTCTTGATATTT	1742	False	NA	-47	True	CATAAA	-4	NA	32852787	32845250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32852594
transcript_156369.nnic	chr6	+	1078	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACAAAGAGTGAACCCT	-40	True	NA	13	True	AATAAA	-19	NA	32894718	32901788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_15637.known	chr1	-	1375	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	79.192802703276	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTCTGGCTGTGTCTGG	-2	True	NA	-9	True	AATAAA	-19	NA	159925507	159918110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
transcript_156372.nnic	chr6	+	2736	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-24	1675	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCTGTGATATTCTG	-23	True	NA	14	True	AATAAA	-15	NA	32894735	32903463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_156373.nnic	chr6	+	3031	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-24	1970	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTTTTTCTTCCTCTTT	-23	True	NA	19	True	AATAAA	-16	NA	32894735	32903758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_156374.nnic	chr6	+	1173	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-28	-9	-28	9	multi-exon	FALSE	canonical	3	82	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAACCCTAATGTAAAC	-27	True	NA	22	True	AATAAA	-28	NA	32894731	32901797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32895027_32900919
transcript_156376.nnic	chr6	+	2841	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-28	-1677	-28	1677	multi-exon	FALSE	canonical	3	82	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTGTGATATTCTGTT	-27	True	NA	16	True	AATAAA	-17	NA	32894731	32903465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32895027_32900919
transcript_156381.known	chr6	+	4282	14	FSM	ENSG00000204256.14	ENST00000679179.1	4282	14	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	210.132333621307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAAGGGCCCTGTTTT	13	True	NA	NA	False	NA	NA	NA	32968898	32981040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_156384.known	chr6	+	4312	14	FSM	ENSG00000204256.14	ENST00000677085.1	4312	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	214.734678728241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAAGGGCCCTGTTTT	0	True	NA	NA	False	NA	NA	NA	32970245	32981040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32970434_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_156389.known	chr6	+	4956	13	FSM	ENSG00000204256.14	ENST00000374825.9	4956	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	163.050839890167	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	-5	True	NA	16	True	AATAAA	-21	NA	32968593	32981501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_156392.known	chr6	+	4579	13	FSM	ENSG00000204256.14	ENST00000449085.4	4579	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	165.836494944736	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	10	False	NA	16	True	AATAAA	-21	NA	32969266	32981501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969353_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_156393.known	chr6	+	4807	13	FSM	ENSG00000204256.14	ENST00000374831.8	4807	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	157.997077152993	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTAGAAGTAATCTTTA	642	False	NA	20	True	AATAAA	-25	NA	32970887	32981505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_156422.known	chr6	-	1093	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	33.3504122913046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-32	True	NA	-21	True	AATAAA	-14	NA	32953097	32948617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
transcript_156423.nnic	chr6	-	1138	5	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	34.1686991265398	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4726	False	NA	-21	True	AATAAA	-14	NA	32968540	32948617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32968346
transcript_156424.nnic	chr6	-	853	4	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	54.9019327731021	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4726	False	NA	-21	True	AATAAA	-14	NA	32968540	32948617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32968346
transcript_156429.known	chr6	+	735	2	FSM	ENSG00000204256.14	ENST00000496118.2	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGAAGCTCCTCCTCCCC	174	False	NA	NA	False	NA	NA	NA	32969164	32972141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969353_32971594
transcript_156430.known	chr6	+	2338	9	FSM	ENSG00000204256.14	ENST00000607833.5	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_5	47.6812332055286	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAAGAAACGGAA	17	False	NA	50	True	NA	NA	NA	32972216	32978203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125
transcript_156432.nnic	chr6	-	3161	6	NNC	ENSG00000204252.14	novel	3464	5	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.7657857400131	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTTTTTTTACTGTT	-10	True	NA	NA	False	ATTAAA	-25	NA	33009602	33004177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33005391_33005708_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_156436.nnic	chr6	-	3235	6	NNC	ENSG00000204252.14	novel	3464	5	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.7657857400131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTTTTTTTACTGTT	-10	True	NA	NA	False	ATTAAA	-25	NA	33009602	33004177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33005488_33005731_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_156441.known	chr6	-	3464	5	FSM	ENSG00000204252.14	ENST00000229829.7	3464	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.54950975679639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGCTTTTTTTTTAC	1	True	NA	NA	False	ATTAAA	-21	NA	33009591	33004181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_156446.nic	chr6	+	1100	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-39	-432	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	44.0390735597378	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	4368	False	NA	20	True	NA	NA	NA	33080346	33086769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_156449.known	chr6	-	1704	6	FSM	ENSG00000231389.8	ENST00000419277.5	1704	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	11.6378692207809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGCAATTTTTACCAG	2	True	NA	NA	False	AATAAA	-19	NA	33080710	33064568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073670_33080679
transcript_156452.nic	chr6	-	1392	5	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-269	-9	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	9.86154146165801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGGGAGACTCTGAGTC	NA	False	NA	-10	True	AATAAA	-16	NA	33081044	33065015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33080679
transcript_156455.nnic	chr6	+	1130	3	FSM	ENSG00000224557.8	ENST00000684891.1	1085	3	-44	-1	-21	0	multi-exon	FALSE	canonical	3	69	junction_1	38	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	4177	False	NA	7	True	AATAAA	-17	NA	33116634	33119149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33116742_33116956_33117221_33118390
transcript_156462.nnic	chr6	+	1180	3	FSM	ENSG00000224557.8	ENST00000692641.1	727	3	-85	-368	3	0	multi-exon	FALSE	canonical	3	28	junction_1	58.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	6	True	NA	7	True	AATAAA	-17	NA	33116658	33119149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33116833_33116973_33117221_33118390
transcript_156464.nnic	chr6	+	1183	3	NIC	ENSG00000224557.8	novel	1085	3	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	55	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	-5	True	NA	7	True	AATAAA	-17	NA	33116672	33119149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_33116833_33116956_33117221_33118390
transcript_15647.known	chr1	-	3996	21	FSM	ENSG00000085552.18	ENST00000361509.7	3996	21	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_13	27.7972570589258	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTTATCTGTCT	8637	False	NA	-3	True	AATAAA	-17	NA	159945596	159927038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934285_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
transcript_156470.known	chr6	-	6209	64	FSM	ENSG00000204248.12	ENST00000374708.8	6209	64	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_59	7.21267465902639	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTGTTGTTATTTCA	8166	False	NA	11	True	NA	NA	NA	33192499	33162680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33163819_33164266_33164474_33164851_33164965_33165548_33165817_33165930_33165985_33166170_33166207_33166512_33166567_33166719_33166828_33167069_33167124_33167263_33167318_33167425_33167534_33167798_33167853_33168518_33168573_33168705_33168760_33168954_33169009_33169382_33169491_33169830_33169885_33170046_33170101_33170325_33170380_33170556_33170611_33170809_33170918_33171113_33171168_33171270_33171325_33171466_33171575_33171712_33171821_33172049_33172104_33172288_33172379_33172529_33172638_33173059_33173114_33173347_33173402_33173501_33173556_33173700_33173746_33173872_33173927_33174010_33174056_33174164_33174219_33174526_33174581_33175573_33175682_33176015_33176070_33176258_33176304_33176432_33176487_33176720_33176766_33176991_33177046_33177180_33177226_33177411_33177466_33177661_33177707_33178131_33178186_33178307_33178353_33178434_33178489_33178678_33178733_33178919_33178974_33179072_33179127_33179230_33179285_33179430_33179488_33179718_33179806_33180257_33180333_33180667_33180731_33180963_33181006_33181110_33181171_33184991_33185055_33186626_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
transcript_156474.nic	chr6	-	3578	28	ISM	ENSG00000204248.12	ENST00000341947.7	6422	66	19657	0	5083	0	3prime_fragment	FALSE	canonical	2	11	junction_26	3.80202819312854	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTGTCACTGCTTG	4767	False	NA	-2	True	NA	NA	NA	33172810	33162693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_33163819_33164266_33164474_33164851_33164965_33165548_33165817_33165930_33165985_33166170_33166207_33166512_33166567_33166719_33166828_33167069_33167124_33167263_33167318_33167425_33167534_33167798_33167853_33168518_33168573_33168705_33168760_33168954_33169009_33169382_33169491_33169830_33169885_33170046_33170101_33170325_33170380_33170556_33170611_33170809_33170918_33171113_33171168_33171270_33171325_33171466_33171575_33171712_33171821_33172049_33172104_33172288_33172379_33172529
transcript_156475.nic	chr6	-	3338	28	ISM	ENSG00000204248.12	ENST00000341947.7	6422	66	19730	167	5156	-166	3prime_fragment	FALSE	canonical	2	11	junction_26	3.80202819312854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATGTTCATTG	4840	False	NA	-1	True	ATTAAA	-39	NA	33172737	33162860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_33163819_33164266_33164474_33164851_33164965_33165548_33165817_33165930_33165985_33166170_33166207_33166512_33166567_33166719_33166828_33167069_33167124_33167263_33167318_33167425_33167534_33167798_33167853_33168518_33168573_33168705_33168760_33168954_33169009_33169382_33169491_33169830_33169885_33170046_33170101_33170325_33170380_33170556_33170611_33170809_33170918_33171113_33171168_33171270_33171325_33171466_33171575_33171712_33171821_33172049_33172104_33172288_33172379_33172529
transcript_156479.known	chr6	-	1194	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	5.04975246918104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	8211	False	NA	NA	False	AATAAA	-19	NA	33192454	33186444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
transcript_156482.known	chr6	-	2885	10	FSM	ENSG00000204231.11	ENST00000374680.4	2885	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	17.7451088722749	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	0	True	NA	-5	True	ATTAAA	-17	NA	33200665	33193587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_156486.known	chr6	-	2846	10	FSM	ENSG00000204231.11	ENST00000374685.8	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	17.5485217976886	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	7830	False	NA	-5	True	ATTAAA	-17	NA	33200614	33193587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195467_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_156489.known	chr6	-	1977	9	FSM	ENSG00000204231.11	ENST00000483281.5	1977	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	24.8869318116959	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCAGATGGGGGCCTC	7807	False	NA	NA	False	NA	NA	NA	33200637	33194219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33200241
transcript_156502.known	chr6	+	2153	8	FSM	ENSG00000112473.18	ENST00000374675.7	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	60.8809477251986	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	0	True	NA	24	True	AATAAA	-24	NA	33200825	33204439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33200939_33201241_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_156516.known	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_3	9.03081145609604	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	-27	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_156526.known	chr6	+	1410	4	FSM	ENSG00000112473.18	ENST00000463972.1	1410	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	6.54896090146283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	1361	False	NA	24	True	AATAAA	-24	NA	33202254	33204439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33202428_33202559_33202701_33202909_33203107_33203540
transcript_156528.known	chr6	+	977	9	FSM	ENSG00000204228.4	ENST00000374662.4	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	7.17635004720366	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	-2	True	NA	34	True	AATAAA	-23	NA	33204654	33206831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33204721_33204901_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
transcript_156532.known	chr6	+	1741	7	FSM	ENSG00000204227.5	ENST00000374656.5	1741	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	16.303544263612	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	-6	True	NA	23	True	NA	NA	NA	33208499	33212716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33211548_33211728_33212003_33212297
transcript_156536.nic	chr6	+	2448	6	NIC	ENSG00000204227.5	novel	1741	7	NA	NA	-526	0	intron_retention	FALSE	canonical	3	19	junction_1	17.4057461776277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	356	False	NA	23	True	NA	NA	NA	33207973	33212716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33212003_33212297
transcript_15654.known	chr1	-	4059	21	FSM	ENSG00000085552.18	ENST00000368094.6	4059	21	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	20.1292697334007	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTGTGTTATCTGT	5	True	NA	-5	True	AATAAA	-15	NA	159945613	159927040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
transcript_156548.known	chr6	-	2936	20	FSM	ENSG00000223501.9	ENST00000445902.3	2936	20	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_10	25.7484098425181	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-5	True	NA	-10	True	AATAAA	-18	NA	33271876	33250277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
transcript_156551.known	chr6	+	685	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11422.1853231138	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	20	False	NA	11	True	AATAAA	-19	NA	33272095	33276510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_156553.known	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2623.01341208923	6168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	-1	True	NA	12	True	AATAAA	-20	NA	33272074	33276511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_156555.known	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_1	10175.6813118336	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	-1	True	NA	11	True	AATAAA	-19	NA	33272074	33276510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_156557.known	chr6	+	642	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2520.66236334817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	23	False	NA	6	True	AATAAA	-14	NA	33272098	33276505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
transcript_156563.known	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	21469	junction_4	2309.00058196181	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	56	False	NA	11	True	AATAAA	-19	NA	33272131	33276510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_156568.known	chr6	-	2070	15	FSM	ENSG00000227057.10	ENST00000374617.9	2070	15	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_13	46.8133506162331	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-19	True	NA	-10	True	ATTAAA	-21	NA	33289239	33279107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_156579.nic	chr6	-	2456	14	NIC	ENSG00000227057.10	novel	2070	15	NA	NA	-256	0	intron_retention	FALSE	canonical	3	656	junction_12	47.3142584561402	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	9908	False	NA	-10	True	ATTAAA	-21	NA	33289503	33279107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_156593.known	chr6	+	1703	1	FSM	ENSG00000235863.4	ENST00000451237.3	1703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGTGCAGTGTGGTCTT	0	True	NA	15	True	AATAAA	-15	NA	33277122	33278825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33277100_33278800
transcript_15660.nnic	chr1	-	4250	20	NIC	ENSG00000085552.18	novel	4059	21	NA	NA	-381	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_18	31.2781286147348	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTGTGTTATCTG	15	True	NA	-6	True	AATAAA	-14	NA	159945994	159927041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159943396_159943629_159945572
transcript_156601.known	chr6	-	2896	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_17	52.7407972588747	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-12	True	NA	-6	True	AATAAA	-23	NA	33298942	33291653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
transcript_156609.nic	chr6	-	2701	17	NIC	ENSG00000237441.10	novel	2687	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	59.3519363100312	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	7302	False	NA	-6	True	AATAAA	-23	NA	33298005	33291653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33297930
transcript_156610.known	chr6	-	2687	17	FSM	ENSG00000237441.10	ENST00000437840.6	2687	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	70.1698553066058	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	0	True	NA	-6	True	AATAAA	-23	NA	33298930	33291653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298869
transcript_156640.known	chr6	+	884	5	FSM	ENSG00000204220.12	ENST00000395131.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	89.0347544501584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289301	33290933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289621_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_156641.known	chr6	+	598	5	FSM	ENSG00000204220.12	ENST00000374607.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	91.9904886387718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCCTGACCAGGCAC	-13	True	NA	25	True	AATAAA	-18	NA	33289596	33290934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_156643.known	chr6	+	805	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	105.422957651548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	-14	True	NA	-34	True	NA	NA	NA	33289595	33290875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
transcript_156644.known	chr6	+	734	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	23.1564725772779	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	-9	True	NA	24	True	AATAAA	-17	NA	33289600	33290933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
transcript_156666.known	chr6	-	3450	8	FSM	ENSG00000231925.13	ENST00000434618.7	3450	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	17.7476644051192	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-8	True	NA	-15	True	AATAAA	-23	NA	33314078	33299693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
transcript_156673.known	chr6	-	1299	7	FSM	ENSG00000231925.13	ENST00000489157.5	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	107.889475338834	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTCACTGCCATCCTG	4	True	NA	-125	True	NA	NA	NA	33314254	33301759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313693_33313865_33314004
transcript_156684.known	chr6	-	581	2	FSM	ENSG00000236104.3	ENST00000441117.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCCTCAGCTACCACC	4995	False	NA	NA	False	NA	NA	NA	33317941	33316468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33316986_33317877
transcript_156685.known	chr6	-	2660	2	FSM	ENSG00000236104.3	ENST00000431845.3	2660	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCGATAACCCG	-4	True	NA	-14	True	ATTAAA	-19	NA	33317744	33314417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33316986_33317652
transcript_156688.known	chr6	-	2462	9	FSM	ENSG00000204209.13	ENST00000620164.4	2462	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	347.60895324344	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	6275	False	NA	-1	True	AATAAA	-24	NA	33323016	33318558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319050_33319201_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_156722.known	chr6	-	2606	8	FSM	ENSG00000204209.13	ENST00000266000.10	2606	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_7	238.4695248574	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	6281	False	NA	0	True	AATAAA	-25	NA	33323010	33318557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321975_33322861
transcript_156725.known	chr6	-	2558	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_7	154.550434275333	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-23	True	NA	0	True	AATAAA	-25	NA	33322959	33318557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_15673.known	chr1	-	5205	2	FSM	ENSG00000177807.10	ENST00000644903.1	5205	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGCTTCTTTTAAAAAG	1	True	NA	NA	False	AATAAA	-23	NA	160070160	160037466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160042533_160070021
transcript_156751.known	chr6	-	2355	7	FSM	ENSG00000204209.13	ENST00000414083.6	2355	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	387.730755665435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	6275	False	NA	-1	True	AATAAA	-24	NA	33323016	33318558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33322861
transcript_156792.known	chr6	-	817	4	FSM	ENSG00000204209.13	ENST00000468536.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	414.640674426532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCACCACTGTCTTAGAGA	6	True	NA	NA	False	NA	NA	NA	33322930	33319532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33319855_33320010_33320225_33320379_33320592_33322861
transcript_156803.nnic	chr6	+	2471	12	NNC	ENSG00000237649.8	novel	2391	11	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	160.783361254199	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	-41	True	NA	45	True	AATAAA	-23	NA	33391806	33409896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409477_33409542_33409645
transcript_156808.known	chr6	+	2391	11	FSM	ENSG00000237649.8	ENST00000428849.7	2391	11	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_3	25.1045812552211	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	-25	True	NA	45	True	AATAAA	-23	NA	33391822	33409896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409645
transcript_156832.known	chr6	+	1752	15	FSM	ENSG00000112511.18	ENST00000495509.6	1752	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	29.1761889217903	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCAGTACCTGGTT	93	False	NA	NA	False	NA	NA	NA	33411125	33416051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414965_33415145_33415234_33415330_33415589_33415671_33415809
transcript_15684.known	chr1	-	2366	7	FSM	ENSG00000162729.14	ENST00000368086.5	2366	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	150.97755535914	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGGCTGTGTCTTCCCT	176	False	NA	NA	False	AATAAA	-19	NA	160098689	160091339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160091632_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_156852.known	chr6	-	661	6	FSM	ENSG00000112514.18	ENST00000607266.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_5	688.772995986341	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-21	True	NA	-19	True	AATAAA	-16	NA	33417931	33416549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417868
transcript_156853.known	chr6	-	855	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	0	0	0	multi-exon	TRUE	canonical	3	608	junction_5	627.165879173923	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTATTTCTCTTTA	0	True	NA	-1	True	NA	NA	NA	33418107	33416441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_156854.known	chr6	-	658	6	FSM	ENSG00000112514.18	ENST00000374484.8	658	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	912.051007345532	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	26	True	NA	-19	True	AATAAA	-16	NA	33418142	33416549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417246_33417311_33417480_33417696_33418086
transcript_156855.known	chr6	-	762	6	FSM	ENSG00000112514.18	ENST00000374496.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	867.550897642323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGATACTTCAACGCCTT	-10	True	NA	-88	True	NA	NA	NA	33418070	33416618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
transcript_156857.known	chr6	-	822	5	FSM	ENSG00000112514.18	ENST00000440279.7	822	5	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_3	82.592372529187	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGCCTTTTGCCTGT	-11	True	NA	-21	True	AATAAA	-14	NA	33417921	33416551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
transcript_156859.known	chr6	-	562	4	FSM	ENSG00000112514.18	ENST00000479249.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	2196	junction_1	11.5566238822398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTTTTTTGTCAT	-3	True	NA	-11	True	AATAAA	-24	NA	33417543	33416541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417311_33417480
transcript_156861.known	chr6	+	2073	10	FSM	ENSG00000197283.18	ENST00000479510.2	2073	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	5.3748384988657	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCACAGAG	1	True	NA	NA	False	NA	NA	NA	33420069	33439121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33420332_33423476_33423599_33425797_33425904_33432160_33432253_33432684_33432807_33435151_33435306_33435514_33435614_33437667_33438292_33438418_33438564_33438774
transcript_156864.known	chr6	+	2715	2	FSM	ENSG00000213588.6	ENST00000395064.3	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	-16	True	NA	27	True	AATAAA	-20	NA	33454575	33457544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33454776_33455029
transcript_156867.nnic	chr6	-	2288	7	NNC	ENSG00000030110.14	novel	2170	6	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_6	192.017938976776	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-23	True	NA	-5	True	AATAAA	-17	NA	33580283	33572551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33577797_33577909_33580024
transcript_156870.known	chr6	-	2170	6	FSM	ENSG00000030110.14	ENST00000374467.4	2170	6	0	0	0	0	multi-exon	TRUE	canonical	3	406	junction_1	29.7011784277998	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-16	True	NA	-5	True	AATAAA	-17	NA	33580276	33572551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
transcript_156879.nic	chr6	+	2414	7	ISM	ENSG00000096433.11	ENST00000605930.3	9079	58	0	35591	0	-35591	5prime_fragment	FALSE	canonical	3	127	junction_4	16.8588914885357	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCATCACTTGGGCCTC	-12	True	NA	-8	True	AATAAA	-6	NA	33621321	33660971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465
transcript_156884.nnic	chr6	-	651	5	NNC	ENSG00000137288.10	novel	1284	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_3	913.665830596723	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACGGTTTGGGAATCTC	-1	True	NA	-23	True	AATAAA	-22	NA	33711714	33697567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33697751_33700443_33700514_33701345_33701421_33710694_33710852_33711548
transcript_156885.known	chr6	-	1284	4	FSM	ENSG00000137288.10	ENST00000607484.6	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_3	120.024997396376	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTATGCCGAAATGCAG	13	True	NA	-6	True	AATAAA	-23	NA	33711700	33696763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33697751_33700443_33700514_33701345_33701421_33711548
transcript_156889.known	chr6	-	2618	6	FSM	ENSG00000161896.12	ENST00000293756.5	2618	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTGTGCCTTATTAC	0	True	NA	NA	False	AATAAA	-33	NA	33746905	33721661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33723188_33725440_33725617_33726730_33726907_33728086_33728301_33735277_33735656_33746757
transcript_156894.known	chr6	-	2941	9	FSM	ENSG00000161904.12	ENST00000293760.10	2941	9	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_7	61.1902770054197	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGCCCATGGTTCT	1	True	NA	NA	False	AATAAA	-19	NA	33789130	33771212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099_33780180_33781076_33781154_33784351_33784428_33786733_33786775_33788380
transcript_156895.known	chr6	-	2323	9	FSM	ENSG00000161904.12	ENST00000421671.6	2323	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	207.875563739464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTCCTTAATAAAGC	6	True	NA	-50	True	NA	NA	NA	33789125	33771431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099_33780180_33781076_33781154_33784351_33784428_33786733_33786775_33788774
transcript_15691.known	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	55.6856255140309	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-8	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_156911.nnic	chr6	-	2804	8	NNC	ENSG00000161904.12	novel	2941	9	NA	NA	-31	0	intron_retention	FALSE	canonical	2	17	junction_7	216.427769918365	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTCCTTAATAAAGC	-30	True	NA	-50	True	NA	NA	NA	33789161	33771431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099_33780180_33781076_33781154_33784351_33784520_33788380
transcript_156919.nnic	chr6	-	4889	11	NNC	ENSG00000124493.14	novel	7368	11	NA	NA	180	0	intron_retention	FALSE	canonical	3	65	junction_10	12.5239770041309	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCGGGCTCCACATCCA	178	False	NA	-8	True	AATAAA	-18	NA	34145907	34021853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34132977_34133860_34145087
transcript_156921.known	chr6	-	7368	11	FSM	ENSG00000124493.14	ENST00000538487.7	7368	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	27.3342276276466	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTTTTTTTTCTATAA	-2	True	NA	NA	False	ATTAAA	-15	NA	34146087	34018642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34132977_34133860_34145999
transcript_156922.nnic	chr6	-	4565	11	NNC	ENSG00000124493.14	novel	7368	11	NA	NA	180	0	intron_retention	FALSE	canonical	3	65	junction_10	12.5239770041309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAAAATCAA	178	False	NA	NA	False	NA	NA	NA	34145907	34022177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34132977_34133860_34145087
transcript_156941.known	chr6	+	1773	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	8325.67495762356	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_156943.nic	chr6	+	1848	5	NIC	ENSG00000137309.20	novel	1920	6	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	1374	junction_1	7792.93798897438	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	NA	False	NA	69	True	AATAAA	-20	NA	34236830	34246231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_34236964_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_156958.known	chr6	+	1848	5	FSM	ENSG00000137309.20	ENST00000374116.3	1848	5	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	8763.48107203981	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTCCTGTGGTGT	140	False	NA	68	True	AATAAA	-19	NA	34238790	34246230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34238958_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_156967.known	chr6	+	2159	5	FSM	ENSG00000137309.20	ENST00000447654.5	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	17101	junction_2	1714.53856766187	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTCCTGTGGTGT	-4	True	NA	68	True	AATAAA	-19	NA	34236872	34246230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_156968.known	chr6	+	1920	6	FSM	ENSG00000137309.20	ENST00000311487.9	1920	6	0	0	0	0	multi-exon	FALSE	canonical	3	17101	junction_3	1578.19322010963	18371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_156969.known	chr6	+	1887	6	FSM	ENSG00000137309.20	ENST00000401473.7	1887	6	0	0	0	0	multi-exon	FALSE	canonical	3	6337	junction_3	5738.95386285689	5941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_156970.nnic	chr6	-	982	6	NNC	ENSG00000272325.2	novel	9900	5	NA	NA	4	-8660	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	181.205518679758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTCCTATAATGTGC	-9	True	NA	44	True	ATTAAA	-30	NA	34392665	34288338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_34288486_34288739_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_156971.known	chr6	-	9900	5	FSM	ENSG00000272325.2	ENST00000607016.2	9900	5	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	21.3131414859471	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTAGTGTCTGGTCT	-13	True	NA	-3	True	AATAAA	-20	NA	34392669	34279678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_156976.known	chr6	-	1053	5	FSM	ENSG00000186577.14	ENST00000481533.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	21.821720830402	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	122	False	NA	-26	True	AATAAA	-15	NA	34248989	34246394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
transcript_156977.known	chr6	-	818	5	FSM	ENSG00000186577.14	ENST00000476320.6	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	18.1796589626978	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	30	True	NA	-26	True	AATAAA	-15	NA	34249006	34246394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248978
transcript_156978.known	chr6	-	903	5	FSM	ENSG00000186577.14	ENST00000468145.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.2489316044193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCAGGCTTTGGAGTT	122	False	NA	-116	True	NA	NA	NA	34248989	34246484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248726
transcript_15698.nic	chr1	-	2581	6	NIC	ENSG00000162729.14	novel	2270	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	358	junction_4	57.8224869752244	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	163	False	NA	NA	False	AATAAA	-16	NA	160098702	160091342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160091609_160091807_160091939_160092281_160093332_160093709_160094172_160094868_160095247_160098408
transcript_156980.known	chr6	-	1093	4	FSM	ENSG00000186577.14	ENST00000637920.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	35.5621521658443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-19	True	NA	-26	True	AATAAA	-15	NA	34249055	34246394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248726
transcript_156981.known	chr6	-	806	4	FSM	ENSG00000186577.14	ENST00000413013.6	806	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	34.8807492274273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	16	True	NA	-26	True	AATAAA	-15	NA	34249020	34246394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248978
transcript_156983.known	chr6	-	777	6	FSM	ENSG00000124614.16	ENST00000467531.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_5	3710.13182515123	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	304	False	NA	-10	True	AATAAA	-22	NA	34425784	34417453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425557
transcript_156984.known	chr6	-	781	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_5	3115.25245204943	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	7	True	NA	-10	True	AATAAA	-22	NA	34426026	34417453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
transcript_156985.known	chr6	-	588	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_5	1435.86302967936	2845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-2	True	NA	-10	True	AATAAA	-22	NA	34426069	34417453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_156986.known	chr6	-	671	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4332.82348282657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	36	False	NA	-10	True	AATAAA	-22	NA	34426052	34417453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_156987.known	chr6	+	4229	10	FSM	ENSG00000124507.11	ENST00000374043.6	4229	10	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	8.50417471917887	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCATTGTCATCTTGAGT	33	True	NA	20	True	GATAAA	-24	NA	34466138	34535229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34466271_34526242_34526369_34527331_34527489_34528641_34528878_34529396_34529553_34529665_34529842_34530242_34530364_34530459_34530588_34531599_34531788_34532420
transcript_156991.known	chr6	-	1910	6	FSM	ENSG00000124664.11	ENST00000374037.8	1910	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.46969384566991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCCCCAGTGTCTGCGC	8	True	NA	NA	False	AATAAA	-17	NA	34556329	34537801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34538453_34539249_34539397_34539514_34539563_34540983_34541182_34544019_34544485_34555928
transcript_156992.known	chr6	-	1866	5	FSM	ENSG00000124664.11	ENST00000544425.2	1866	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.73205080756888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCCCCAGTGTCTGCGC	4	True	NA	NA	False	AATAAA	-17	NA	34556333	34537801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34538453_34539249_34539397_34540983_34541182_34544019_34544485_34555928
transcript_156994.known	chr6	-	4338	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	14.6714007511212	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-5	True	NA	-15	True	ATTAAA	-22	NA	34696767	34587287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
transcript_156996.known	chr6	-	4232	4	FSM	ENSG00000196821.10	ENST00000374026.7	4232	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	29.0095769627128	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-9	True	NA	-15	True	ATTAAA	-22	NA	34696859	34587287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34590601_34606554_34606905_34654624_34654780_34696445
transcript_156997.known	chr6	+	365	2	FSM	ENSG00000272288.7	ENST00000606496.2	371	2	5	1	5	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	-13	True	NA	9	True	AATAAA	-15	NA	34696944	34697470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34696998_34697158
transcript_156998.known	chr6	+	806	6	FSM	ENSG00000124562.10	ENST00000244520.10	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_1	394.54865352704	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTCTCTAGCTCAT	-1	True	NA	8	True	TATAAA	-18	NA	34757504	34773857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34757552_34757911_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_157000.known	chr6	+	600	5	FSM	ENSG00000124562.10	ENST00000374018.5	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1272.95529674062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTGGGACAAAAAAGA	19	True	NA	-53	True	NA	NA	NA	34757524	34773714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34757552_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_157001.known	chr6	+	1054	5	FSM	ENSG00000124562.10	ENST00000374017.3	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	2892	junction_2	158.207735272331	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTCCCTTTTTCCTCC	24	False	NA	27	True	AATAAA	-24	NA	34757553	34773794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_157002.known	chr6	+	9567	21	FSM	ENSG00000065060.18	ENST00000192788.6	9567	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	8.73842090998139	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTTGTATATCCGTTG	-10	True	NA	7	True	ATTAAA	-16	NA	34792082	34877514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34792295_34821652_34821816_34821916_34821956_34823256_34823349_34834216_34834407_34834720_34834862_34835293_34835465_34836155_34836349_34855616_34855704_34856238_34856410_34856789_34856930_34857328_34857471_34857723_34857918_34858123_34859572_34864001_34864199_34867224_34867380_34867465_34867617_34870853_34871117_34871583_34871693_34871818_34871926_34872312
transcript_157005.known	chr6	-	1945	6	FSM	ENSG00000064995.19	ENST00000650109.1	1945	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	186.205907532495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-1	True	NA	NA	False	AATACA	-39	NA	34888027	34877461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34878721_34879625_34879737_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_157007.known	chr6	-	1849	5	FSM	ENSG00000064995.19	ENST00000361288.9	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	19.4679223339318	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-16	True	NA	NA	False	AATACA	-39	NA	34888042	34877461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_157009.known	chr6	-	1465	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	167.348604880816	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGTGTATTCATTTTCT	NA	False	NA	-4	True	ATTAAA	-17	NA	34888071	34877777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
transcript_157011.nic	chr6	-	3022	3	FSM	ENSG00000064995.19	ENST00000685682.1	3022	3	18	-18	9	-2	multi-exon	FALSE	canonical	3	396	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAGGTGTATTCATTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	34888062	34877779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34880377_34882931_34883081_34887786
transcript_157014.known	chr6	+	6350	24	FSM	ENSG00000064999.15	ENST00000360359.5	6350	24	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_12	17.2159639285361	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAATTCTTCTGAGTCT	-37	True	NA	21	True	AATAAA	-21	NA	34889254	35091406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34889600_34967238_34967320_34970009_34970167_34981689_34981987_34982751_34982828_34983112_34983215_34983323_34983426_34985081_34985279_34989223_34989317_34994301_34994423_35017472_35018060_35054098_35054166_35060146_35060254_35078557_35078657_35079515_35079669_35079820_35079929_35080993_35081159_35082690_35082817_35083154_35083227_35083416_35083504_35084120_35084259_35085765_35085937_35086951_35087050_35088605
transcript_157019.known	chr6	+	7819	22	FSM	ENSG00000146197.9	ENST00000274938.8	7819	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	2.20183390889465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCATCTTTTCCTCTA	-1	True	NA	NA	False	ATTAAA	-21	NA	35213955	35253079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35214504_35227579_35227703_35228613_35228740_35231724_35231860_35232849_35232976_35233184_35233302_35237901_35238019_35239751_35239875_35240373_35240491_35241140_35241267_35241542_35241660_35241805_35241911_35242203_35242321_35242621_35242781_35243020_35243237_35243593_35243756_35243962_35244131_35244649_35244812_35245227_35245426_35245943_35246097_35246205_35246286_35248555
transcript_157030.nnic	chr6	+	2943	15	NNC	ENSG00000065029.15	novel	2653	14	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_14	57.2097822375988	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	9	False	NA	5	True	AATAAA	-14	NA	35259578	35295983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35294779_35294916_35295143
transcript_157037.nic	chr6	+	2804	14	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	50.9865976124577	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	7917	False	NA	5	True	AATAAA	-14	NA	35259467	35295983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_157049.known	chr6	+	2653	14	FSM	ENSG00000065029.15	ENST00000373953.8	2653	14	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	28.5483084815854	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCCTCCATCCTTT	-2	True	NA	7	True	AATAAA	-16	NA	35259734	35295985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_157056.nic	chr6	+	2639	13	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.3947325012847	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	7917	False	NA	5	True	AATAAA	-14	NA	35259467	35295983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_157064.known	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	33.3137442440137	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	37	False	NA	5	True	AATAAA	-14	NA	35259773	35295983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_157078.known	chr6	+	1476	5	FSM	ENSG00000065029.15	ENST00000491400.5	1476	5	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_1	74.8214541425118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGTGCAACAGAACAG	7358	False	NA	NA	False	NA	NA	NA	35258908	35288315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259387_35281055_35281225_35286127_35286209_35286321_35286400_35287645
transcript_157081.nic	chr6	+	1911	5	ISM	ENSG00000065029.15	ENST00000373953.8	2653	14	-150	7014	-19	656	5prime_fragment	FALSE	canonical	3	167	junction_1	6.18465843842649	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACAAAACTTTACAGTAG	15	False	NA	NA	False	NA	NA	NA	35259584	35288971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645
transcript_157082.known	chr6	+	697	4	FSM	ENSG00000065029.15	ENST00000460229.1	697	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.9156444164835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGCAGAGGATGATGAG	34	False	NA	NA	False	NA	NA	NA	35259603	35287777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259728_35281055_35281225_35286127_35286400_35287645
transcript_157085.known	chr6	+	2296	11	FSM	ENSG00000023892.11	ENST00000316637.7	2296	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	7.57627876995032	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	-19	True	NA	NA	False	AATAAA	-19	NA	35297817	35321771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35297953_35309669_35309811_35310458_35310645_35312301_35312539_35312625_35312773_35317890_35318000_35318172_35318472_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_157093.known	chr6	+	3734	8	FSM	ENSG00000112033.14	ENST00000360694.8	3734	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	11.1702958870426	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	-1	True	NA	15	True	AATAAA	-19	NA	35342557	35428178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35342682_35347066_35347151_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_157096.nic	chr6	+	2035	7	ISM	ENSG00000112033.14	ENST00000360694.8	3734	8	-34	2785	-34	0	5prime_fragment	FALSE	canonical	3	88	junction_4	10.1721296797781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAACAGTGGTCTAGAG	NA	False	NA	2	True	AATAAA	-18	NA	35342523	35425393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_35342682_35347066_35347151_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328
transcript_157097.known	chr6	+	3516	7	FSM	ENSG00000112033.14	ENST00000448077.6	3516	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	36.975968171533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTCAGTTACTTGCAT	-1	True	NA	28	True	AATAAA	-32	NA	35342557	35428191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35342682_35347066_35347151_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_157098.nnic	chr6	+	3672	7	NIC	ENSG00000112033.14	novel	3734	8	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	33.9595347435739	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	-23	True	NA	15	True	AATAAA	-19	NA	35342535	35428178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35342682_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_15710.known	chr1	+	5435	23	FSM	ENSG00000018625.15	ENST00000361216.8	5435	23	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_15	8.39876515913781	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTCTTCCATAATTCA	17	True	NA	NA	False	AATAAA	-26	NA	160115758	160143591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135_160125254_160127551_160127821_160128651_160128851_160128979_160129090_160129265_160129401_160130101_160130292_160130421_160130598_160134483_160134621_160135144_160135296_160135433_160135603_160135838_160135994_160136246_160136371_160136569_160136716_160136900_160137032_160139639_160139742_160139892_160139985_160141293
transcript_157100.known	chr6	+	3453	6	FSM	ENSG00000112033.14	ENST00000418635.6	3453	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	41.2407565401024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTCAGTTACTTGCAT	-1	True	NA	28	True	AATAAA	-32	NA	35342557	35428191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35342682_35347066_35347151_35410986_35411218_35423945_35424149_35424328_35424780_35425831
transcript_157105.known	chr6	+	2576	10	FSM	ENSG00000112039.5	ENST00000229769.3	2576	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	18.6070476492705	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	-10	True	NA	NA	False	AATAAA	-15	NA	35452337	35467102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_157106.nnic	chr6	+	2612	10	NNC	ENSG00000112039.5	novel	2576	10	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	35.8777072364332	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	35452280	35467102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458317_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_157109.nnic	chr6	+	2504	9	NIC	ENSG00000112039.5	novel	2576	10	NA	NA	-57	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	38.1370882475314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCTTTTTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	35452280	35467099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35466243
transcript_157111.nnic	chr6	+	2564	9	NIC	ENSG00000112039.5	novel	2576	10	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	36.5196864718196	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	35452280	35467102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35452794_35455746_35456354_35457555_35457601_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_157120.nnic	chr6	+	2376	8	NIC	ENSG00000112039.5	novel	2576	10	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	40.6091374054698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCTTTTTCTTTTTTT	-6	True	NA	NA	False	AATAAA	-12	NA	35452341	35467099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458296_35458441_35459330_35459455_35459681_35459761_35466243
transcript_157131.known	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1751.87122814435	2713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	-3	True	NA	21	True	AATAAA	-15	NA	35468400	35470780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_157132.known	chr6	+	962	6	FSM	ENSG00000198755.11	ENST00000478340.2	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_3	4868.42590577283	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	16	False	NA	26	True	AATAAA	-20	NA	35468419	35470785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469286_35469380_35469530_35470178_35470352_35470579
transcript_157137.known	chr6	+	1069	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1815.92281980815	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	4	True	NA	26	True	AATAAA	-20	NA	35468407	35470785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
transcript_157147.known	chr6	+	1063	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	0	0	0	0	multi-exon	FALSE	canonical	3	13064	junction_3	328.868894850212	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	16	False	NA	26	True	AATAAA	-20	NA	35468419	35470785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_157151.known	chr6	-	1676	13	FSM	ENSG00000007866.22	ENST00000639578.3	1676	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	50.8256141680113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCTGCCACTGTTCTG	14	True	NA	NA	False	NA	NA	NA	35497064	35474891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480059_35480123_35484559_35484625_35486460_35486712_35496897
transcript_157155.known	chr6	-	2986	13	FSM	ENSG00000007866.22	ENST00000338863.13	2986	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	23.6835327225949	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-1	True	NA	0	True	ATTAAA	-29	NA	35497079	35473596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460_35486712_35496897
transcript_157159.nnic	chr6	-	2951	12	NIC	ENSG00000007866.22	novel	2986	13	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_9	42.6387865177057	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-29	True	NA	0	True	ATTAAA	-29	NA	35497107	35473596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35484559_35484625_35486460_35486712_35496897
transcript_15717.known	chr1	+	2694	6	FSM	ENSG00000162734.13	ENST00000368076.1	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	219.953995189903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTTAAAATTTCTGTG	4	True	NA	44	True	AATAAA	-25	NA	160205420	160215376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160205523_160207132_160207238_160208463_160208666_160211542_160211717_160213109_160213266_160213421
transcript_157173.known	chr6	-	1941	14	FSM	ENSG00000112041.13	ENST00000322263.8	1941	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	11.1392477410589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGCGGTGGTTCCTCAG	58	False	NA	NA	False	AATAAA	-18	NA	35512876	35497873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35498461_35499980_35500153_35503558_35503658_35503736_35503849_35505740_35505854_35506002_35506174_35506273_35506280_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35512179_35512271_35512638_35512691_35512811
transcript_157175.known	chr6	-	2084	14	FSM	ENSG00000112041.13	ENST00000614066.4	2084	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	9.41734519557101	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCGGAGCGGTGGTTCCT	0	True	NA	NA	False	AATAAA	-15	NA	35512869	35497876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35498461_35499980_35500153_35503558_35503658_35503736_35503849_35505740_35505854_35506002_35506174_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35511647_35511807_35512179_35512271_35512638_35512691_35512811
transcript_157197.known	chr6	-	3750	11	FSM	ENSG00000096060.15	ENST00000357266.9	3750	11	0	0	0	0	multi-exon	FALSE	canonical	1	147	junction_7	137.013466491437	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCATTGTTTTTGGTTT	1	True	NA	-6	True	AATAAA	-17	NA	35688915	35573589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
transcript_157209.known	chr6	+	488	4	FSM	ENSG00000196748.10	ENST00000360454.6	488	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	18	False	NA	3	True	ATTAAA	-14	NA	35776614	35779552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35776703_35777458_35777582_35777850_35777930_35779354
transcript_157210.known	chr6	+	426	3	FSM	ENSG00000196748.10	ENST00000403376.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	1	True	NA	3	True	ATTAAA	-14	NA	35776597	35779552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35776703_35777458_35777582_35779354
transcript_157211.known	chr6	+	532	3	FSM	ENSG00000196748.10	ENST00000481904.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	-3	True	NA	3	True	ATTAAA	-14	NA	35776593	35779552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35776805_35777458_35777582_35779354
transcript_157214.known	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_4	64.1330561324571	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-3	True	NA	54	True	AGTAAA	-13	NA	35921098	35832965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_157218.nic	chr6	-	989	10	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	37441	-33	-740	5prime_fragment	FALSE	canonical	3	649	junction_5	54.4122353705919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGAAATGGAGAAAGAG	NA	False	NA	-6	True	NA	NA	NA	35921180	35870406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_157219.nic	chr6	-	934	10	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	37496	-33	-795	5prime_fragment	FALSE	canonical	3	649	junction_5	54.4122353705919	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGAAGCAGAAGCG	NA	False	NA	-61	True	AAGAAA	-1	NA	35921180	35870461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_157226.nic	chr6	-	875	8	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	39597	-33	1677	5prime_fragment	FALSE	canonical	3	649	junction_3	56.0429864169515	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATTTTCTTTTAGGGAC	NA	False	NA	NA	False	NA	NA	NA	35921180	35872562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_157229.nic	chr6	-	737	6	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	53623	-33	137	5prime_fragment	FALSE	canonical	3	649	junction_1	63.3232974504645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACATCTGAATTTTG	NA	False	NA	-13	True	AATAAA	-26	NA	35921180	35886588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_157231.known	chr6	-	634	5	FSM	ENSG00000096063.16	ENST00000513367.1	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_3	58.0102361656975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTCTTCTTACACGCA	-6	True	NA	NA	False	NA	NA	NA	35921101	35887824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_157234.known	chr6	-	4357	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	180.276035259512	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-1	True	NA	-14	True	AATAAA	-20	NA	35921147	35833033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
transcript_157235.known	chr6	-	4286	16	FSM	ENSG00000096063.16	ENST00000361690.7	4286	16	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_15	174.808644586651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	99	False	NA	-14	True	AATAAA	-20	NA	35921047	35833033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35920986
transcript_157237.known	chr6	+	4222	12	FSM	ENSG00000112062.11	ENST00000229794.9	4222	12	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	38.8659488945153	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCACTCATCTGTTTATG	-4	True	NA	6	True	AATAAA	-17	NA	36027807	36111236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36102570_36102650_36107454_36107629_36108379
transcript_15724.nnic	chr1	+	2574	5	NIC	ENSG00000162734.13	novel	2694	6	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	224.178500307233	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	-2	True	NA	40	True	AATAAA	-21	NA	160205334	160215372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_160205523_160207132_160207238_160211542_160211717_160213109_160213266_160213421
transcript_157241.known	chr6	+	4319	12	FSM	ENSG00000112062.11	ENST00000229795.7	4319	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	68.6715743518884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCACTCATCTGTTTATG	NA	False	NA	6	True	AATAAA	-17	NA	36027710	36111236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36100187_36100268_36102570_36102650_36107454_36107629_36108379
transcript_157244.known	chr6	+	1066	11	FSM	ENSG00000112062.11	ENST00000310795.8	1066	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	75.0077329346781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAAATATTATTCAAGT	346	False	NA	-20	True	NA	NA	NA	36028157	36108509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36107454_36107629_36108379
transcript_157246.known	chr6	+	6316	12	FSM	ENSG00000156711.17	ENST00000211287.9	6316	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	9.74467432426299	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGCACAGACCCCTG	-8	True	NA	11	True	AATAAA	-18	NA	36130512	36144521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
transcript_157252.known	chr6	+	5384	8	FSM	ENSG00000112078.14	ENST00000373731.7	5384	8	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_3	27.6095221669212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTTTTTTTTTAG	-34	True	NA	12	True	AATAAA	-14	NA	36442999	36491141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_157256.known	chr6	-	1605	8	FSM	ENSG00000010030.14	ENST00000340181.9	1605	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	1.35526185435788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTTTATTTTT	2	True	NA	NA	False	AATAAA	-16	NA	36387669	36366193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36385533_36385670_36387535
transcript_157258.known	chr6	+	1339	7	FSM	ENSG00000112078.14	ENST00000265344.8	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	66.7183133280011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGGGTCTGGTGCT	2	True	NA	NA	False	NA	NA	NA	36443035	36487406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36470051_36470258_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_157265.known	chr6	-	1434	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.894427190999916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-32	True	NA	NA	False	AATAAA	-15	NA	36387800	36366194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
transcript_157268.nnic	chr6	-	2312	14	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	45.6987822400647	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-37	True	NA	-11	True	AATAAA	-14	NA	36547483	36493891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_36494638_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_157269.known	chr6	-	3585	14	FSM	ENSG00000112079.9	ENST00000229812.8	3585	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_13	30.9941777315424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-33	True	NA	-11	True	AATAAA	-14	NA	36547479	36493891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_15727.known	chr1	+	1021	4	FSM	ENSG00000162734.13	ENST00000368077.5	1021	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	198.488174850684	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCATGGGCCTAGCAT	-11	True	NA	NA	False	NA	NA	NA	160205379	160214035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160205523_160211542_160211651_160213109_160213266_160213421
transcript_157273.known	chr6	+	1095	7	FSM	ENSG00000112081.17	ENST00000477442.6	1095	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1856.61149678655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATGTACAGAAAATTCAA	24	False	NA	NA	False	NA	NA	NA	36594390	36602040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36599820_36600277_36601151_36601191_36601707_36601795_36601961
transcript_157280.known	chr6	+	4228	6	FSM	ENSG00000112081.17	ENST00000373715.11	4228	6	0	0	0	0	multi-exon	FALSE	canonical	3	3600	junction_3	220.315228706506	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTATCCTGCTTTCTCT	-5	True	NA	NA	False	AATACA	-16	NA	36594361	36605600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36601151_36601191_36601707_36601795_36601961
transcript_157287.known	chr6	+	2102	3	FSM	ENSG00000124762.14	ENST00000615513.4	2102	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	60	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	-4	True	NA	23	True	AATAAA	-24	NA	36676459	36687337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36676525_36684096_36684547_36685750
transcript_157288.known	chr6	+	2117	3	FSM	ENSG00000124762.14	ENST00000244741.10	2117	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	3	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAATATTACTATTGTG	3	True	NA	18	True	AATAAA	-19	NA	36678713	36687332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36678799_36684096_36684547_36685750
transcript_157289.known	chr6	+	2267	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	58	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	-1	True	NA	23	True	AATAAA	-24	NA	36678709	36687337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36678940_36684096_36684547_36685750
transcript_15729.known	chr1	+	2420	4	FSM	ENSG00000162734.13	ENST00000360472.9	2420	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	20.0055547841649	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	-7	True	NA	40	True	AATAAA	-21	NA	160205383	160215372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160205523_160211542_160211717_160213109_160213266_160213421
transcript_157290.known	chr6	+	2104	4	FSM	ENSG00000124762.14	ENST00000448526.6	2104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.0457905740837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	26	False	NA	23	True	AATAAA	-24	NA	36676489	36687337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36676525_36677901_36677934_36684096_36684547_36685750
transcript_157296.known	chr6	+	6763	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	14.683643110618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	-15	True	NA	22	True	ATTAAA	-19	NA	36885951	36928964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_157300.known	chr6	+	1309	8	FSM	ENSG00000198663.17	ENST00000355190.7	1309	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	6.90755280213519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTCTGGGGGTTGGTT	18	False	NA	8	True	AATAAA	-17	NA	36885863	36923522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36886029_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_157306.known	chr6	-	1516	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	34.6153466286591	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTCTGATTC	-3	True	NA	-21	True	AATAAA	-20	NA	36874803	36854828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
transcript_157320.known	chr6	-	1955	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	657.552901432134	2654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	278	False	NA	-9	True	AATAAA	-18	NA	36986196	36968140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_157326.known	chr6	-	2006	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	449.759292830736	4031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	176	False	NA	-9	True	AATAAA	-18	NA	36986298	36968140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_157364.known	chr6	-	1572	11	FSM	ENSG00000137409.20	ENST00000460219.2	1572	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_3	469.711922352414	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCGAGGGCAGAACCT	349	False	NA	NA	False	NA	NA	NA	36986125	36969465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_157406.known	chr6	+	3037	16	FSM	ENSG00000146192.15	ENST00000274963.13	3037	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.339934634239519	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCAAGGTGTTTTAT	8	True	NA	NA	False	AATAAA	-17	NA	37005654	37029069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37005886_37008833_37009066_37010972_37011051_37011705_37011855_37013608_37013766_37013961_37014101_37014645_37014705_37014891_37015039_37015767_37015861_37020540_37020621_37020708_37020740_37021511_37021605_37022238_37022371_37025791_37025939_37027428_37027576_37027947
transcript_157408.known	chr6	+	2703	6	FSM	ENSG00000137193.14	ENST00000373509.6	2703	6	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	20.0738636041994	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGGCTTCTAATCGTCT	5	True	NA	25	True	AATAAA	-16	NA	37170151	37175428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37170658_37170772_37170880_37170980_37171032_37171124_37171492_37172995_37173173_37173933
transcript_15741.known	chr1	-	4106	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_13	209.176039222028	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	16	True	NA	-4	True	AGTAAA	-22	NA	160262451	160215714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
transcript_157410.nnic	chr6	+	2640	6	NNC	ENSG00000137193.14	novel	2703	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	125.198402545719	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGGCTTCTAATCGTCT	-6	True	NA	25	True	AATAAA	-16	NA	37170140	37175428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_37170658_37170772_37170880_37170980_37171032_37171198_37171492_37172995_37173173_37173933
transcript_15742.known	chr1	-	3972	14	FSM	ENSG00000132716.19	ENST00000326837.6	3972	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	214.504492994419	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-9	True	NA	-4	True	AGTAAA	-22	NA	160262476	160215714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
transcript_157426.nnic	chr6	+	1941	13	NNC	ENSG00000065491.8	novel	3462	13	NA	NA	-1	-8304	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	33.3652971746927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTTCTAGATTTCC	-3	True	NA	NA	False	AATAAA	-25	NA	37257770	37324666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37324261
transcript_157427.known	chr6	+	3462	13	FSM	ENSG00000065491.8	ENST00000373491.3	3462	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	13.7042167071145	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	-2	True	NA	27	True	AATAAA	-20	NA	37257771	37332970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_15743.known	chr1	-	3867	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	213.897752491021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	3	True	NA	-9	True	AGTAAA	-17	NA	160262549	160215719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
transcript_157430.nnic	chr6	+	3347	12	NIC	ENSG00000065491.8	novel	3462	13	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	7	junction_7	33.721023679843	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	-2	True	NA	27	True	AATAAA	-20	NA	37257771	37332970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_157434.known	chr6	-	876	2	FSM	ENSG00000286105.1	ENST00000650812.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGTGTCTGTTTTTGC	5	True	NA	NA	False	NA	NA	NA	37257622	37212180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_37212997_37257562
transcript_157439.known	chr6	+	2124	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	114.291428428579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTACCTCTTCTTTG	7	True	NA	-51	True	NA	NA	NA	37354014	37391168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_157443.known	chr6	+	5616	8	FSM	ENSG00000112130.17	ENST00000373479.9	5616	8	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	22.1405528754964	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATCAAATGCCCATTTTC	-25	True	NA	NA	False	AATAAA	-16	NA	37353982	37394734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_157455.known	chr6	+	1800	7	FSM	ENSG00000112130.17	ENST00000469731.5	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	122.709231745438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	26	False	NA	12	True	AATAAA	-13	NA	37354090	37391231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37390741
transcript_157457.nic	chr6	+	2062	7	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	125.652187494776	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353943	37391231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37376925_37377034_37381149_37381355_37390741
transcript_157469.known	chr6	+	977	4	FSM	ENSG00000112130.17	ENST00000494320.5	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	138.679486586878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAGTAAGACCACAGGG	-29	True	NA	NA	False	NA	NA	NA	37353978	37368874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37359182_37359343_37360445_37360575_37368483
transcript_157471.nic	chr6	+	661	3	ISM	ENSG00000112130.17	ENST00000479516.1	1525	4	-128	1564	-35	145	5prime_fragment	FALSE	canonical	3	322	junction_2	16.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGAATTGAGAACTAAAA	NA	False	NA	28	True	AATATA	-43	NA	37353943	37368683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_37354276_37360445_37360575_37368483
transcript_157472.known	chr6	+	4034	24	FSM	ENSG00000137200.13	ENST00000373451.9	4034	24	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_15	20.3412289565586	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	4	True	NA	13	True	ATTAAA	-18	NA	37433220	37481508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_157473.known	chr6	-	572	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	54.7783412186483	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTCTGCTGAGTAAATG	-3	True	NA	NA	False	AATAAA	-15	NA	37499893	37482937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
transcript_157475.known	chr6	+	3138	6	FSM	ENSG00000156639.12	ENST00000287218.9	3138	6	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_2	20.165316759228	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	-20	True	NA	15	True	ATTAAA	-15	NA	37819726	38154624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38082391_38082458_38116571_38116740_38152234
transcript_157477.known	chr6	+	3001	5	FSM	ENSG00000156639.12	ENST00000373391.6	3001	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	61.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	51	True	NA	15	True	ATTAAA	-15	NA	37819797	38154624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38116571_38116740_38152234
transcript_157484.known	chr6	-	2016	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_3	101.833982540211	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCATCATGTTCTT	-8	True	NA	0	True	AATAAA	-37	NA	38703145	38675924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
transcript_157491.nic	chr6	-	387	3	ISM	ENSG00000124767.7	ENST00000373365.5	2016	6	-31	8492	-31	-8474	5prime_fragment	FALSE	canonical	3	1522	junction_2	3	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGGGCGCTCTCCAGA	0	True	NA	NA	False	GATAAA	-32	NA	38703176	38684416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_38684515_38686891_38686975_38702970
transcript_157492.known	chr6	-	2018	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	-14	True	NA	-1	True	ATTAAA	-28	NA	39115186	39104062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39105777_39114882
transcript_157499.known	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	24.8130510014387	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-2	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
transcript_157505.known	chr6	-	1524	5	FSM	ENSG00000124780.14	ENST00000373231.9	1524	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.26917420765551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGGGTTTTTCTGTCA	6	True	NA	-3	True	AATAAA	-20	NA	39314419	39299000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39299738_39303956_39304132_39304494_39304656_39310892_39311008_39314083
transcript_157508.known	chr6	-	1706	6	FSM	ENSG00000124780.14	ENST00000453413.2	1706	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.59302042357633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATACCATTATTTGGG	8580	False	NA	-14	True	AATAAA	-9	NA	39314461	39299011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39299738_39300372_39300524_39303956_39304132_39304494_39304656_39310892_39311008_39314083
transcript_157510.known	chr6	+	6185	25	FSM	ENSG00000146122.17	ENST00000274867.9	6185	25	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_20	1.82526634281746	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTAAACTTGTGC	-2	True	NA	16	True	ATTAAA	-20	NA	39792375	39904869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_39792466_39856246_39856471_39860927_39861018_39864432_39864508_39864979_39865075_39867509_39867844_39868822_39868934_39870339_39870444_39871505_39871573_39873237_39873356_39875329_39875469_39878202_39878262_39878403_39878589_39879177_39879478_39883961_39884070_39887485_39887593_39888678_39888764_39891340_39891448_39891633_39891723_39896811_39896981_39897174_39897283_39898876_39898938_39900076_39900209_39901301_39901473_39901812
transcript_157512.known	chr6	-	3358	11	FSM	ENSG00000124615.20	ENST00000373188.6	3358	11	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_1	17.1583798768998	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAATTTGTGATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	39934551	39905058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_157515.nic	chr6	-	2921	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	35.1346615814703	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACCATCTAAGGGAAATC	-16	True	NA	-18	True	AATAAA	-22	NA	39934500	39905317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_157516.nic	chr6	-	2997	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	36.0332493917548	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-31	True	NA	-21	True	AATAAA	-19	NA	39934515	39905320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_157517.nic	chr6	-	2795	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-18	-202	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	36.0332493917548	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAGAATGAAGACACT	-31	True	NA	NA	False	AATAAA	-21	NA	39934515	39905522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_157518.nic	chr6	-	2709	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-3	-209	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	35.1346615814703	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGCAGATGCAAGAATGA	-16	True	NA	NA	False	AATAAA	-14	NA	39934500	39905529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_157519.known	chr6	-	2852	9	FSM	ENSG00000124615.20	ENST00000373195.7	2852	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	47.6392695158102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-13	True	NA	-21	True	AATAAA	-19	NA	39934497	39905320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_157526.known	chr6	+	1098	3	FSM	ENSG00000204091.8	ENST00000451810.3	1098	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	NA	False	NA	6	True	AATAAA	-17	NA	40334774	40379887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_40335124_40337116_40337260_40379281
transcript_157527.known	chr6	-	3164	3	FSM	ENSG00000156564.9	ENST00000338305.7	3164	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGACTCCTCCTCTTCA	-8	True	NA	45	True	NA	NA	NA	40587364	40391590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_40392913_40431713_40433132_40586940
transcript_157530.known	chr6	+	6209	10	FSM	ENSG00000001167.15	ENST00000341376.11	6209	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	40.5821830394437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCTCAAGTGTGTATTC	12	True	NA	21	True	AATAAA	-21	NA	41072973	41102403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41073085_41079028_41079165_41080810_41080898_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_157533.known	chr6	+	1660	9	FSM	ENSG00000001167.15	ENST00000353205.5	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	17.0545998194036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCTGTGGTAATAATAAG	21	True	NA	10	True	AATAAA	-20	NA	41072982	41097950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_157536.known	chr6	-	3184	6	FSM	ENSG00000124596.17	ENST00000424266.7	3184	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.022478661666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGTGGCTACCTTA	-7	True	NA	-19	True	AATAAA	-26	NA	41072356	41064771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072235
transcript_157537.known	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.182879439152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-2	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_157543.known	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	0	True	NA	-8	True	AATAAA	-21	NA	41072320	41071040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41071277_41071595_41071676_41072235
transcript_157544.known	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	103.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-3	True	NA	NA	False	NA	NA	NA	41072490	41070824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41071277_41071595_41071676_41072318
transcript_157545.known	chr6	-	1194	5	FSM	ENSG00000161911.12	ENST00000373127.8	1194	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAATGGCTGAATGGGA	3	True	NA	NA	False	AATAAA	-21	NA	41154337	41149341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41149919_41150818_41150908_41151281_41151385_41153757_41154091_41154245
transcript_157547.known	chr6	-	419	2	FSM	ENSG00000234753.6	ENST00000414386.6	453	2	34	0	-7	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCGCCAGACCTGCT	-7	True	NA	0	True	ATTAAA	-28	NA	41546176	41523894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41524226_41546088
transcript_157555.known	chr6	+	1913	6	FSM	ENSG00000112559.15	ENST00000419164.6	1913	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.0412876320223	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	-16	True	NA	13	True	AATAAA	-18	NA	41637017	41654244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41637274_41638139_41638376_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_157559.known	chr6	+	1622	5	FSM	ENSG00000112559.15	ENST00000373051.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	69.8082194300929	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATTTCCTCAGGACT	34	False	NA	8	True	AATAAA	-13	NA	41637067	41654239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41637274_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_157564.known	chr6	+	1606	5	FSM	ENSG00000112559.15	ENST00000230321.11	1606	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	13.6267200749116	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	-7	True	NA	13	True	AATAAA	-18	NA	41638467	41654244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41638653_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_157565.known	chr6	-	2192	10	FSM	ENSG00000112561.19	ENST00000419396.6	2192	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.54901677842801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	9692	False	NA	0	True	AGTAAA	-15	NA	41733690	41683977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41732648_41732740_41733663
transcript_157568.known	chr6	-	3605	9	FSM	ENSG00000112561.19	ENST00000424495.2	3605	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6.31961232988227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	1	True	NA	0	True	AGTAAA	-15	NA	41734179	41683977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41732648
transcript_157569.known	chr6	-	2333	9	FSM	ENSG00000112561.19	ENST00000373033.6	2333	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	4.41411089575239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-15	True	NA	0	True	AGTAAA	-15	NA	41735608	41683977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41735349
transcript_157570.known	chr6	-	2188	9	FSM	ENSG00000112561.19	ENST00000358871.6	2188	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	5.74456264653803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	8551	False	NA	0	True	AGTAAA	-15	NA	41736259	41683977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41736145
transcript_157573.known	chr6	-	2595	7	FSM	ENSG00000112561.19	ENST00000394283.5	2595	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.03957069398096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	41733853	41686528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41732648
transcript_157581.known	chr6	-	3177	7	FSM	ENSG00000164663.15	ENST00000373006.5	3177	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	7.47031161033832	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCACTTACTATGTTCT	10	True	NA	NA	False	AATAAA	-15	NA	41895361	41797644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41798930_41799829_41799939_41803805_41804011_41805627_41807012_41871563_41871638_41891793_41891876_41895323
transcript_157584.nnic	chr6	+	2201	3	FSM	ENSG00000268745.1_ENSG00000214736.8	ENST00000398881.4	565	3	-37	-1599	-5	17	multi-exon	FALSE	canonical	3	893	junction_2	243	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGTAATCACTAATT	-21	True	NA	18	True	AATAAA	-27	NA	41787656	41791494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_157595.known	chr6	-	2174	7	FSM	ENSG00000137218.10	ENST00000373018.7	2174	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	7.1043804953157	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGGATATCATCTTC	-15	True	NA	-9	True	AATATA	-18	NA	41779900	41770175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41771534_41771815_41771965_41772797_41772960_41775418_41775606_41776921_41777011_41778032_41778177_41779815
transcript_157597.known	chr6	+	637	3	FSM	ENSG00000214736.8	ENST00000398884.7	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	428.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	-16	True	NA	34	True	AATAAA	-21	NA	41787661	41789898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_157598.known	chr6	+	565	3	FSM	ENSG00000214736.8	ENST00000398881.4	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_2	243	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTATTCTTTTAATA	16	True	NA	31	True	AATAAA	-18	NA	41787693	41789895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_157600.nic	chr6	-	2221	3	ISM	ENSG00000288721.1	ENST00000683313.1	1190	6	0	98817	0	-98817	5prime_fragment	FALSE	canonical	2	12	junction_1	158	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTTTGGCCTCCTGA	-12	True	NA	-23	True	AATAAA	-12	NA	41921139	41905356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_41907288_41916784_41916940_41921004
transcript_157601.known	chr6	-	2478	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	2.62466929133727	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-12	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
transcript_157602.known	chr6	-	932	4	FSM	ENSG00000124641.16	ENST00000409312.5	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	150.156214952592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACCTTGCCTCCTTTA	8	True	NA	NA	False	NA	NA	NA	41921119	41906803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41907288_41909344_41909523_41916784_41916940_41921004
transcript_157603.known	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	157	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-12	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41907288_41909268_41909523_41921004
transcript_157604.known	chr6	-	815	3	FSM	ENSG00000124641.16	ENST00000409060.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCCCCAAAGTGCTG	-6	True	NA	NA	False	NA	NA	NA	41921093	41908951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41909523_41916784_41916940_41921004
transcript_157609.nnic	chr6	+	2662	8	NNC	ENSG00000112578.10	novel	1718	7	NA	NA	-320	1329	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	67.7636950538187	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGCAGACTTCATGTTTG	NA	False	NA	7	True	AATATA	-20	NA	41921178	41934375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360_41933356_41934060
transcript_157612.known	chr6	+	1718	7	FSM	ENSG00000112578.10	ENST00000230340.9	1718	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	13.1497781983829	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTTGGTGTAGTC	-1	True	NA	24	True	GATAAA	-24	NA	41921498	41933046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_157617.known	chr6	+	1153	6	FSM	ENSG00000112578.10	ENST00000489290.1	1153	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	76.0010526242894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTCCCCCGCGA	2	False	NA	NA	False	NA	NA	NA	41921533	41932655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41921831_41927373_41927537_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_157619.known	chr6	-	2026	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	8.31790237980706	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	0	True	NA	-20	True	AATAAA	-19	NA	41941808	41934951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
transcript_157620.known	chr6	-	2133	5	FSM	ENSG00000112576.13	ENST00000372988.8	2133	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.097433517017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	NA	False	NA	-24	True	AATAAA	-15	NA	42048968	41934955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_42048500
transcript_157622.known	chr6	-	1724	4	FSM	ENSG00000112576.13	ENST00000414200.6	1724	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	111.702979170457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTACTGTAATAAAGATGA	0	True	NA	-53	True	NA	NA	NA	41941755	41934984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41941451
transcript_157623.known	chr6	-	1843	4	FSM	ENSG00000112576.13	ENST00000415497.6	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	116.878854660142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	NA	False	NA	-24	True	AATAAA	-15	NA	42048894	41934955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_42048500
transcript_157624.nic	chr6	-	1960	4	NIC	ENSG00000112576.13	novel	2026	5	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	112.665680469057	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	-26	True	NA	-20	True	AATAAA	-19	NA	41941879	41934951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_41936108_41937234_41937395_41940369_41940586_41941451
transcript_157627.known	chr6	-	576	3	FSM	ENSG00000112576.13	ENST00000511686.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCCACCCACCTCCCTG	-1	True	NA	NA	False	NA	NA	NA	42048704	41935895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41937234_41937395_42048500
transcript_157642.known	chr6	+	794	5	FSM	ENSG00000137413.17	ENST00000372978.7	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	13.1220234720107	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTATCTTTCATAAT	NA	False	NA	5	True	AATAAA	-23	NA	42050512	42057789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388
transcript_157645.known	chr6	-	894	3	FSM	ENSG00000188112.9	ENST00000356542.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	3	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCTCATG	-4	True	NA	54	True	AATAAA	-32	NA	42142619	42126376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42126844_42128671_42128779_42142299
transcript_157646.known	chr6	-	6385	5	FSM	ENSG00000188112.9	ENST00000341865.9	6385	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	38.2197592875727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGACGTCATACTTTTAG	-5	True	NA	-29	True	CATAAA	-20	NA	42142620	42101118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42103879_42104462_42107584_42110215_42110292_42128671_42128779_42142299
transcript_157650.nic	chr6	-	1055	2	ISM	ENSG00000188112.9	ENST00000356542.5	894	3	-46	1713	-45	-1713	5prime_fragment	FALSE	canonical	3	102	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCGGTGTAGTGGCAAGC	363	False	NA	NA	False	TATAAA	-10	NA	42142665	42128089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_42128779_42142299
transcript_157651.known	chr6	+	2520	3	FSM	ENSG00000048545.17	ENST00000679182.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	4	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGCAAGCACGGTGAA	128	False	NA	NA	False	NA	NA	NA	42178099	42181338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42178430_42178801_42178896_42179242
transcript_157655.known	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	TRUE	canonical	3	729	junction_5	52.1272481529574	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	1	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
transcript_157661.nnic	chr6	-	2061	6	NIC	ENSG00000048544.6	novel	2100	7	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	98	junction_4	289.302886262823	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	NA	False	NA	-10	True	ATTAAA	-26	NA	42217895	42206806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214279_42214345_42217801
transcript_15767.nic	chr1	-	4102	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	108	junction_12	198.661772870374	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	1	True	NA	-9	True	AGTAAA	-17	NA	160262526	160215719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_157673.known	chr6	-	7646	18	FSM	ENSG00000124496.12	ENST00000541110.5	7646	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	21.9407822074654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTAAATATTTCT	156	False	NA	-1	True	AATAAA	-20	NA	42452051	42224930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42452020
transcript_157676.known	chr6	-	7286	18	FSM	ENSG00000124496.12	ENST00000372922.8	7286	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	22.588541664589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	162	False	NA	12	True	AATAAA	-43	NA	42452045	42225224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42452020
transcript_157693.known	chr6	+	7891	47	FSM	ENSG00000024048.11	ENST00000372899.6	7891	47	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_10	31.2099497609845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	19	True	NA	6	True	AATAAA	-21	NA	42564028	42693505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617239_42617339_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
transcript_157694.known	chr6	+	7891	47	FSM	ENSG00000024048.11	ENST00000372901.2	7891	47	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	26.1906273369398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	19	True	NA	6	True	AATAAA	-21	NA	42564028	42693505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617408_42617508_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
transcript_157697.known	chr6	-	3001	3	FSM	ENSG00000112619.8	ENST00000230381.7	3001	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTGTTAAATGACTG	1	True	NA	-2	True	ATTAAA	-19	NA	42722597	42696597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42698508_42704364_42704612_42721753
transcript_157698.known	chr6	-	1606	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGGTTTGTTTGGTGT	970	False	42746121	-19	True	AATAAA	-17	NA	42746103	42744497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42744500_42746100
transcript_157705.known	chr6	+	3769	7	FSM	ENSG00000146223.16	ENST00000304734.9	3769	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	147.758436495368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTTGAACAAGTTGTGAG	43	False	NA	54	True	NA	NA	NA	42879681	42889925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_157718.known	chr6	+	4499	6	FSM	ENSG00000146223.16	ENST00000493763.7	4499	6	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	55.5467370778878	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATGTACCATGACATA	-23	True	NA	29	True	AATAAA	-26	NA	42879615	42889900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_157722.known	chr6	+	1702	6	FSM	ENSG00000146223.16	ENST00000397415.7	1702	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	195.525548202786	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	0	True	NA	NA	False	NA	NA	NA	42879638	42887010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42881083_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_157724.known	chr6	+	1103	6	FSM	ENSG00000146223.16	ENST00000483998.6	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	216.098681162102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCGTGGTGGCTCATG	-21	True	NA	NA	False	AAGAAA	-13	NA	42879617	42887301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_157727.known	chr6	+	703	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	60.2966624283633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	8	True	NA	1	True	AATAAA	-21	NA	42879932	42886249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
transcript_157729.nic	chr6	+	1493	5	ISM	ENSG00000146223.16	ENST00000483998.6	1103	6	8	291	8	0	5prime_fragment	FALSE	canonical	3	69	junction_1	201.525432638166	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	-13	True	NA	NA	False	NA	NA	NA	42879625	42887010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_157731.known	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	5	True	NA	-11	True	AATAAA	-17	NA	42890821	42890264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42890300_42890800
transcript_157734.nnic	chr6	+	1908	7	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-378	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	251.949509933152	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	5068	False	NA	48	True	NA	NA	NA	42929101	42939294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_42929722_42934474_42934599_42935411_42935474_42935536_42935671_42937716_42937840_42938089_42938208_42938567
transcript_157748.known	chr6	+	1431	6	FSM	ENSG00000137161.18	ENST00000372836.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	80.8613628378844	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	-1	True	NA	48	True	NA	NA	NA	42929479	42939294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_157752.nnic	chr6	+	1714	6	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-345	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	263.971665146091	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	-30	True	NA	48	True	NA	NA	NA	42929134	42939294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_42929722_42935411_42935474_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_157758.nnic	chr6	+	1664	5	NIC	ENSG00000137161.18	novel	1431	6	NA	NA	-357	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	223.438330418037	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	5089	False	NA	48	True	NA	NA	NA	42929122	42939294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_42929722_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_157762.known	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	35	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	5	True	NA	NA	False	AATAAA	-27	NA	42929457	42928286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42928647_42929164
transcript_157765.known	chr6	-	3444	17	FSM	ENSG00000124587.14	ENST00000304611.13	3444	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_14	12.2268595211526	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATATTGTTTACCCTTC	-2	True	NA	NA	False	AATAAA	-26	NA	42979181	42963864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42964472_42964789_42964930_42965074_42965153_42965251_42965369_42965680_42965790_42966043_42966106_42966241_42966448_42966524_42966658_42966781_42966859_42967367_42967564_42968289_42968499_42968873_42968986_42969667_42969802_42969884_42969988_42974002_42974087_42974874_42975039_42978268
transcript_157771.nnic	chr6	-	3316	16	NIC	ENSG00000124587.14	novel	3444	17	NA	NA	-101	-145	combination_of_known_splicesites	FALSE	canonical	2	6	junction_14	17.1433174541374	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTGTTGTGGCATGAA	5027	False	NA	-18	True	AATAAA	-16	NA	42979282	42964009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_42964472_42964789_42964930_42965074_42965153_42965251_42965369_42965680_42965790_42966043_42966106_42966241_42966448_42966524_42966658_42966781_42966859_42967367_42967564_42968289_42968499_42968873_42968986_42969667_42969802_42969884_42969988_42974874_42975039_42978268
transcript_157786.known	chr6	+	1076	6	FSM	ENSG00000124713.6	ENST00000372808.4	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3.18747549010185	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTTTATTTATGT	1	True	NA	12	True	AATATA	-20	NA	42960753	42963880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42960974_42962211_42962340_42962761_42962879_42963071_42963215_42963327_42963450_42963534
transcript_157790.known	chr6	+	2894	16	FSM	ENSG00000112640.16	ENST00000394110.7	2894	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	120.269253482897	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	-21	True	NA	22	True	AATAAA	-16	NA	42984552	43012342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006607_43006933_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_157792.known	chr6	+	2973	16	FSM	ENSG00000112640.16	ENST00000485511.6	2973	16	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_6	43.2725727864147	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	-4	True	NA	22	True	AATAAA	-16	NA	42984569	43012342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006680_43006910_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_157818.known	chr6	+	1869	11	FSM	ENSG00000124702.19	ENST00000326974.9	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_4	41.3202129713776	5056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGTGTTTTTGTGG	2	True	NA	30	True	ATTAAA	-10	NA	43014248	43021294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_157834.known	chr6	+	1903	10	FSM	ENSG00000124702.19	ENST00000244670.12	1903	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	474.88340349351	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTTTGTGGAATA	1510	False	NA	34	True	ATTAAA	-14	NA	43014102	43021298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_157858.known	chr6	-	2018	4	FSM	ENSG00000124733.5	ENST00000244711.4	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	612.658868285516	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	-11	True	NA	NA	False	NA	NA	NA	43013946	43011142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013785
transcript_157859.known	chr6	-	1004	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_3	284.713891477041	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	2882	False	NA	-17	True	AATAAA	-28	NA	43013983	43012081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
transcript_157862.known	chr6	+	1183	7	FSM	ENSG00000124541.7	ENST00000244496.6	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_4	17.2763486368568	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTCTGTTTTTTGTG	-5	True	NA	26	True	CATAAA	-18	NA	43021622	43029599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43021785_43024984_43025133_43025262_43025330_43026036_43026142_43027177_43027253_43027359_43027478_43029091
transcript_157865.known	chr6	-	5549	26	FSM	ENSG00000044090.13	ENST00000674100.1	5549	26	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_24	24.7556377417347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGGAGCTTTTACAGA	5517	False	NA	NA	False	NA	NA	NA	43053943	43037661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052112_43052797_43053621
transcript_157866.known	chr6	-	5406	26	FSM	ENSG00000044090.13	ENST00000265348.9	5406	26	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_19	20.6945016852303	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTGTGTGTTTGGCGAC	1	True	NA	NA	False	AATAAA	-20	NA	43053851	43037616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
transcript_157875.nnic	chr6	+	2697	17	NIC	ENSG00000137171.15	novel	2770	17	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.7962261911693	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	237	False	NA	12	True	AATAAA	-17	NA	43059879	43075093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43060183_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_157878.known	chr6	+	2770	17	FSM	ENSG00000137171.15	ENST00000394056.6	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	30.6369236991902	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTGTGACTTGAGT	252	False	NA	6	True	AATAAA	-11	NA	43059894	43075087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43060277_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_157882.nic	chr6	+	3058	16	NIC	ENSG00000137171.15	novel	2770	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	23.504514932715	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	211	False	NA	12	True	AATAAA	-17	NA	43059853	43075093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_157883.known	chr6	+	2688	16	FSM	ENSG00000137171.15	ENST00000259708.7	2688	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	26.1571320208381	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	214	False	NA	12	True	AATAAA	-17	NA	43059856	43075093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43060239_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_157885.known	chr6	+	2602	16	FSM	ENSG00000137171.15	ENST00000479388.5	2602	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	26.3814749819305	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGACTTGAGTCC	240	False	NA	8	True	AATAAA	-13	NA	43059882	43075089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43060183_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_157893.nic	chr6	-	2405	7	ISM	ENSG00000044090.13	ENST00000688302.1	5381	25	5	11280	-1	-6	5prime_fragment	FALSE	canonical	3	72	junction_5	20.3749573960018	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGCTACTTTGCTATT	-2	True	NA	-4	True	AATAAA	-23	NA	43053891	43049104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
transcript_157898.known	chr6	-	1216	7	FSM	ENSG00000112651.12	ENST00000388752.8	1216	7	0	0	0	0	multi-exon	TRUE	canonical	3	379	junction_1	43.1804997140556	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTTCTGACTTTGG	26	False	43059460	NA	False	AATAAA	-15	NA	43059434	43054028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43054487_43055544_43055619_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_157906.known	chr6	-	899	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	163.767396022529	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	12	True	NA	NA	False	AATAAA	-23	NA	43059394	43054231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_157911.known	chr6	-	661	5	FSM	ENSG00000112651.12	ENST00000480286.1	661	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	45.6316775935314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAAGGAGTTGCCTGGGT	0	True	NA	NA	False	AATATA	-18	NA	43059406	43055891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_157912.known	chr6	-	1020	4	FSM	ENSG00000112651.12	ENST00000491898.5	1020	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	34.6826886052522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTGTGCTACTGCGG	-10	True	NA	NA	False	NA	NA	NA	43059416	43055615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43056197_43056306_43056446_43058064_43058234_43059285
transcript_157914.known	chr6	-	570	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	197	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTACTGTGGTTTT	26	False	43059460	NA	False	AATAAA	-20	NA	43059434	43054234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43054487_43058064_43058234_43059285
transcript_157916.known	chr6	-	689	2	FSM	ENSG00000112651.12	ENST00000468957.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGCTGGCCAACATG	22	False	43059460	NA	False	NA	NA	NA	43059438	43057697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43058234_43059285
transcript_157917.known	chr6	+	2361	16	FSM	ENSG00000137171.15	ENST00000347162.10	2361	16	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	12.3504385887034	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	-12	True	NA	12	True	AATAAA	-17	NA	43059630	43075093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_157918.known	chr6	-	1689	3	FSM	ENSG00000044090.13	ENST00000683242.1	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACCCAAGAGTTTG	NA	False	NA	NA	False	NA	NA	NA	43039679	43037642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43038012_43038266_43038473_43038565
transcript_157928.known	chr6	+	4222	20	FSM	ENSG00000112655.16	ENST00000230419.9	4222	20	0	0	0	0	multi-exon	TRUE	canonical	3	804	junction_5	62.0897839764178	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTCTGAGATTCATTC	7	True	NA	15	True	AATAAA	-17	NA	43076313	43161715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_157934.known	chr6	+	3436	20	FSM	ENSG00000112655.16	ENST00000481273.5	3436	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	219.011136968748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGCAGGGCCTGGCC	345	False	NA	NA	False	NA	NA	NA	43076813	43161010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076987_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_157938.known	chr6	+	4023	19	FSM	ENSG00000112655.16	ENST00000352931.6	4023	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	224.876818132357	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	35	True	NA	12	True	AATAAA	-14	NA	43076341	43161712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142042_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_157943.known	chr6	+	5282	19	FSM	ENSG00000112655.16	ENST00000487673.5	5282	19	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_5	63.5419565870739	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTTCTGAGATTCAT	16	False	NA	13	True	AATAAA	-15	NA	43076368	43161713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_157947.known	chr6	+	4071	19	FSM	ENSG00000112655.16	ENST00000345201.6	4071	19	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	210.15861881381	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	35	True	NA	12	True	AATAAA	-14	NA	43076341	43161712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_157977.known	chr6	+	3801	17	FSM	ENSG00000112655.16	ENST00000349241.6	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	227.430956212539	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	35	True	NA	12	True	AATAAA	-14	NA	43076341	43161712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_15799.known	chr1	-	1237	9	FSM	ENSG00000162735.19	ENST00000532508.5	1237	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	310.545261395179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAAGGAAGGCATCCCT	6869	False	NA	NA	False	NA	NA	NA	160285096	160279295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160281185_160281296_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_15801.known	chr1	-	3653	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	49.767623275887	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCTGTGACTCTGGA	5	True	NA	-6	True	AATACA	-20	NA	160285133	160276806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_158010.known	chr6	+	2412	7	FSM	ENSG00000112655.16	ENST00000471863.5	2412	7	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_5	42.6279120869049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACATACAAACTATTTTG	32	True	NA	NA	False	AATAAA	-27	NA	43076338	43133721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420
transcript_158015.known	chr6	+	902	2	FSM	ENSG00000112655.16	ENST00000476760.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACAGAGCCTCGAGGT	0	True	NA	NA	False	NA	NA	NA	43076306	43129617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976
transcript_158016.known	chr6	+	4016	19	FSM	ENSG00000112655.16	ENST00000470019.5	4016	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	224.788295464372	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGATTCATTCCCTG	26	True	NA	19	True	AATAAA	-21	NA	43076332	43161719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_158018.nnic	chr6	+	3468	7	NNC	ENSG00000112658.8	novel	4231	7	NA	NA	1045	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.3195891841938	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGGTCTTTGGTTCTG	797	False	NA	38	True	AATAAA	-22	NA	43172313	43181506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_43172452_43173846_43174114_43175705_43175968_43176547_43176668_43178293_43178486_43178805_43178883_43179094
transcript_158019.nnic	chr6	+	3559	7	NNC	ENSG00000112658.8	novel	4231	7	NA	NA	1081	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	30.9551647099837	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGGTCTTTGGTTCTG	833	False	NA	38	True	AATAAA	-22	NA	43172349	43181506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_43172579_43173846_43174114_43175705_43175968_43176547_43176668_43178293_43178486_43178805_43178883_43179094
transcript_158024.known	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_3	27.0102861065105	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-11	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
transcript_158026.known	chr6	-	796	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_2	31.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTTCTGTCTTGTG	-8	True	NA	-11	True	ATTAAA	-15	NA	43229478	43225634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43226144_43226326_43226396_43229260
transcript_158031.known	chr6	-	8210	10	FSM	ENSG00000171467.16	ENST00000361428.3	8210	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	13.9682178931713	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTCTGGATTTTTG	7	True	NA	-5	True	AATAAA	-14	NA	43369647	43336069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43340503_43340789_43340909_43342111_43342212_43342675_43342880_43348323_43348626_43352376_43352477_43354663_43356146_43357125_43357766_43365291_43365441_43368966
transcript_158037.known	chr6	-	991	8	FSM	ENSG00000146215.14	ENST00000372569.8	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	27.8230560682969	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-6	True	NA	-15	True	AATAAA	-14	NA	43308826	43305471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_158039.nnic	chr6	-	1433	7	NNC	ENSG00000146215.14	novel	991	8	NA	NA	-31	0	intron_retention	FALSE	canonical	3	29	junction_1	47.3415485828487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	13	False	NA	-15	True	AATAAA	-14	NA	43308857	43305471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314
transcript_158040.nnic	chr6	-	973	7	NNC	ENSG00000146215.14	novel	991	8	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	52.2411608685038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	1	False	NA	-15	True	AATAAA	-14	NA	43308869	43305471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
transcript_158042.nic	chr6	-	1362	7	ISM	ENSG00000146215.14	ENST00000372569.8	991	8	-31	0	-31	0	intron_retention	FALSE	canonical	3	81	junction_4	29.797464470805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	13	False	NA	-15	True	AATAAA	-14	NA	43308857	43305471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314
transcript_158043.nnic	chr6	-	902	7	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_4	35.7650512216729	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	1	False	NA	-15	True	AATAAA	-14	NA	43308869	43305471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
transcript_158061.nic	chr6	-	3323	4	ISM	ENSG00000171467.16	ENST00000361428.3	8210	10	112	18111	-57	-18111	5prime_fragment	FALSE	canonical	3	40	junction_3	16.2685791225499	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGAGTCCAGGAGTA	19	True	NA	-25	True	AATAAA	-18	NA	43369535	43354180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43356146_43357125_43357766_43365291_43365441_43368966
transcript_158063.known	chr6	-	773	3	FSM	ENSG00000146215.14	ENST00000485819.1	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	25	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTCATTCTTGGCAAA	82	False	NA	NA	False	NA	NA	NA	43308788	43307502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43307744_43307838_43307897_43308314
transcript_158067.nic	chr6	-	1306	2	ISM	ENSG00000171467.16	ENST00000607252.5	1185	4	22999	0	22999	0	3prime_fragment	FALSE	canonical	3	152	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTTAATTGGGCAGATG	13	False	NA	NA	False	NA	NA	NA	43308857	43307133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43307897_43308314
transcript_158072.nic	chr6	+	4996	22	NIC	ENSG00000124574.15	novel	5043	22	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	18.9130963995719	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGTCTCCTCTGT	2835	False	NA	16	True	ATTAAA	-20	NA	43427527	43450425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43427700_43427967_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
transcript_158075.known	chr6	+	5043	22	FSM	ENSG00000124574.15	ENST00000372530.9	5043	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	20.0102014798779	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGGTCTCCTCTGTGT	-19	True	NA	18	True	ATTAAA	-22	NA	43427540	43450427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43427758_43427967_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
transcript_158082.nnic	chr6	+	4775	21	NIC	ENSG00000124574.15	novel	5088	20	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	17.1885863293059	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGTCTCCTCTGT	-26	True	NA	16	True	ATTAAA	-20	NA	43427844	43450425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43427968_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
transcript_158087.nic	chr6	+	4919	21	ISM	ENSG00000124574.15	ENST00000372530.9	5043	22	332	2	17	0	3prime_fragment	FALSE	canonical	3	43	junction_1	15.2422931345648	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGTCTCCTCTGT	2	True	NA	16	True	ATTAAA	-20	NA	43427872	43450425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
transcript_158101.nnic	chr6	+	2265	3	NIC	ENSG00000124574.15	novel	774	3	NA	NA	-11	387	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACCTGAATCCCTTGAG	-26	True	NA	NA	False	AAGAAA	-9	NA	43427844	43435543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43427968_43432141_43433361_43434620
transcript_158111.known	chr6	+	2778	11	FSM	ENSG00000137221.14	ENST00000372444.6	2778	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	46.2017315692821	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_158119.known	chr6	+	2751	11	FSM	ENSG00000137221.14	ENST00000372445.9	2751	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	50.3368652182474	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_15812.known	chr1	-	3504	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	228.952445329204	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGGTGGCTTCATGA	6811	False	NA	-19	True	ATTAAA	-21	NA	160285154	160276866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
transcript_158123.known	chr6	+	2695	11	FSM	ENSG00000137221.14	ENST00000372449.5	2695	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	50.4996039588431	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-6	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_158130.known	chr6	+	2720	10	FSM	ENSG00000137221.14	ENST00000259751.5	2720	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	40.9661106552992	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-6	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498922_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_158132.nic	chr6	+	2672	10	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_3	23.2814237399267	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-10	True	NA	14	True	AATAAA	-15	NA	43477568	43506553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_158134.known	chr6	+	2665	10	FSM	ENSG00000137221.14	ENST00000372452.5	2665	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	24.0251925391496	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-6	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_158139.nic	chr6	+	2625	10	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	16	junction_1	42.0158700175699	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-13	True	NA	14	True	AATAAA	-15	NA	43477565	43506553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43477629_43478136_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_158140.nic	chr6	+	2622	10	NIC	ENSG00000137221.14	novel	2665	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	16	junction_1	42.3556371690947	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-13	True	NA	14	True	AATAAA	-15	NA	43477565	43506553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43477629_43478136_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_158148.known	chr6	+	2572	9	FSM	ENSG00000137221.14	ENST00000436109.6	2572	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	45.2023229491583	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_158162.known	chr6	+	3268	4	FSM	ENSG00000137221.14	ENST00000454762.1	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	6.97614984548545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	NA	False	NA	14	True	AATAAA	-15	NA	43501525	43506553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43501688_43502282_43502350_43503400_43503509_43503622
transcript_158166.known	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	1	166	junction_9	68.5294470987984	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-24	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
transcript_158176.nnic	chr6	-	3705	31	NIC	ENSG00000124571.18	novel	5323	32	NA	NA	-53	628	combination_of_known_splicesites	FALSE	canonical	1	9	junction_17	108.754075274855	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCGGCCTTTCTTGTCA	114	False	NA	-10	True	NA	NA	NA	43576091	43523848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
transcript_158196.known	chr6	+	1275	9	FSM	ENSG00000171453.20	ENST00000642195.1	1275	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	23.5660640540588	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	-7	True	NA	6	True	AATAAA	-19	NA	43517088	43521513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_158197.known	chr6	+	1280	9	FSM	ENSG00000171453.20	ENST00000304004.7	1280	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	110.391066214617	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTATTAATAAGGGTC	-7	True	NA	NA	False	AAAAAG	-17	NA	43517088	43529585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43529248
transcript_158200.nic	chr6	-	1438	9	NIC	ENSG00000137207.12	novel	1507	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	141.300212314066	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	25	False	43516984	-32	True	ATTAAA	-21	NA	43516959	43511831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513099_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
transcript_158202.known	chr6	-	1507	9	FSM	ENSG00000137207.12	ENST00000372422.7	1507	9	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_8	17.4122801493658	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	-1	True	NA	-32	True	ATTAAA	-21	NA	43516926	43511831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
transcript_158203.known	chr6	-	1639	9	FSM	ENSG00000137207.12	ENST00000510102.5	1639	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_8	180.275483635463	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAACTGCAGCGGCTG	-1	True	NA	-40	True	ATTAAA	-13	NA	43516985	43511839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515605_43515702_43515888_43516188_43516726
transcript_158204.known	chr6	-	1321	9	FSM	ENSG00000137207.12	ENST00000490447.6	1321	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	143.41025067965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGGCCAGTCCTC	12	False	NA	-70	True	NA	NA	NA	43516972	43512158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516191_43516726
transcript_158218.known	chr6	-	2121	6	FSM	ENSG00000204052.4	ENST00000372441.1	2121	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.0591260281974	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTCGTGTGGCTGT	6298	False	NA	-8	True	NA	NA	NA	43510686	43506968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43507309_43507455_43507679_43507825_43507927_43508297_43508421_43508759_43508921_43509513
transcript_158228.known	chr6	-	3031	12	FSM	ENSG00000172432.19	ENST00000307126.10	3031	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	9.3737809124729	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGCTTATGCGTTA	-8	True	NA	-12	True	AATAAA	-15	NA	43629264	43620493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628976
transcript_158233.known	chr6	+	8368	11	FSM	ENSG00000170734.12	ENST00000372236.9	8368	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	2.42693221990232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTGTATTTAAATATA	20	True	NA	NA	False	AATAAA	-22	NA	43576184	43620523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587490_43597695_43597866_43600987_43601092_43603891_43604012_43604614_43604739_43605253_43605320_43610553_43610724_43613659
transcript_158257.nic	chr6	+	2458	3	ISM	ENSG00000170734.12	ENST00000372226.1	3322	11	-171	30652	-59	-2392	5prime_fragment	FALSE	canonical	3	13	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTAGACATGGTGTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	43576125	43585008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_43576441_43582315_43582457_43583006
transcript_158258.known	chr6	-	2830	12	FSM	ENSG00000172432.19	ENST00000307114.11	2830	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	16.9997569258266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTTAGCTACAGGCTCA	-18	True	NA	0	True	AATAAA	-27	NA	43627353	43620481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43627278
transcript_158260.known	chr6	+	1517	4	FSM	ENSG00000124688.14	ENST00000451025.6	1517	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	143.799242773466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAGATTCTTATTA	47	False	NA	-10	True	AATATA	-1	NA	43629539	43640919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43629770_43633193_43633316_43636380_43636647_43640020
transcript_158261.known	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	10	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	-2	True	NA	12	True	AATAAA	-16	NA	43635839	43640941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43635922_43636380_43636647_43640020
transcript_158264.known	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_2	37.992630864419	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	0	True	NA	99	True	AAGAAA	-15	NA	43687791	43671201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_158266.known	chr6	+	2545	5	FSM	ENSG00000172426.16	ENST00000372163.5	2545	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCCATCCTTCATTC	2	True	NA	NA	False	AATAAA	-17	NA	43645035	43672600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43645326_43650374_43650541_43655561_43655692_43656576_43656724_43670788
transcript_158270.known	chr6	-	803	5	FSM	ENSG00000096080.12	ENST00000427312.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_1	27.1753564834024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGAAGCTGTATCACT	0	True	NA	NA	False	NA	NA	NA	43687791	43671783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43671907_43675201_43675618_43678517_43678626_43681088_43681121_43687667
transcript_158271.known	chr6	-	785	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	300.616449982365	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGACAGGAGTTTTG	0	True	NA	-61	True	GGGGCT	-15	NA	43687791	43671509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_158282.known	chr6	+	535	5	FSM	ENSG00000112715.26	ENST00000518538.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_4	31.3079462756662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCTCCCTCTCCATGG	376	False	NA	NA	False	AAGAAA	-40	NA	43771152	43778937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888
transcript_158283.known	chr6	+	1683	4	FSM	ENSG00000112715.26	ENST00000476772.5	1683	4	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	24.589970855344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGTTGCTCCATAATA	NA	False	NA	NA	False	ATTAAA	-24	NA	43770183	43778764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459
transcript_158285.known	chr6	+	2757	4	FSM	ENSG00000181577.16	ENST00000439969.2	2757	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.77123616632825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCACGCTTTGATGAAT	12	True	NA	NA	False	NA	NA	NA	44000616	44005108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44000701_44000973_44001144_44002052_44002128_44002680
transcript_158287.known	chr6	+	5250	4	FSM	ENSG00000181577.16	ENST00000336600.6	5250	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTCTGGAGCACCTA	-20	True	NA	NA	False	ATTAAA	-18	NA	44000584	44007612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44000701_44001016_44001144_44002052_44002128_44002680
transcript_158291.known	chr6	+	3284	24	FSM	ENSG00000137216.19	ENST00000323267.11	3284	24	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	66.0778883938763	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	-4	True	NA	14	True	AATAAA	-19	NA	44127553	44155519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44127679_44134560_44134744_44135016_44135097_44135327_44135367_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
transcript_158301.nic	chr6	+	3259	23	NIC	ENSG00000137216.19	novel	3284	24	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	83	junction_1	35.4425387595049	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	-18	True	NA	14	True	AATAAA	-19	NA	44127539	44155519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44127679_44134560_44134744_44135016_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
transcript_158304.nic	chr6	+	3362	23	NIC	ENSG00000137216.19	novel	3284	24	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	33.5227812018056	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	-17	True	NA	14	True	AATAAA	-19	NA	44127624	44155519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44127867_44134560_44134744_44135016_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
transcript_158326.known	chr6	-	957	3	FSM	ENSG00000180992.7	ENST00000372014.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_2	163.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGTTTTTATTTTTC	7	True	NA	0	True	TATAAA	-23	NA	44127452	44113450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44114210_44116540_44116630_44127343
transcript_158328.nnic	chr6	-	766	3	NNC	ENSG00000180992.7	novel	957	3	NA	NA	37	-243	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	806	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	-10	True	NA	-16	True	AATAAA	-13	NA	44127415	44113693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_44114210_44116540_44116630_44127254
transcript_15833.known	chr1	-	1607	4	FSM	ENSG00000132716.19	ENST00000610139.5	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	144.962064002966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	127	False	NA	40	True	AATAAA	-17	NA	160262425	160239221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261359_160262116
transcript_158330.nnic	chr6	-	699	3	NNC	ENSG00000180992.7	novel	957	3	NA	NA	-24	-243	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_2	792.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	1311	False	NA	-16	True	AATAAA	-13	NA	44127476	44113693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_44114210_44116540_44116630_44127382
transcript_158331.known	chr6	+	2921	21	FSM	ENSG00000137216.19	ENST00000371893.6	2921	21	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	22.1812984290821	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	4268	False	NA	14	True	AATAAA	-19	NA	44135032	44155519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
transcript_158335.known	chr6	+	828	2	FSM	ENSG00000262179.3	ENST00000573382.3	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGCTTTGAAAGTCTA	-3	True	NA	9	True	AATAAA	-19	NA	44216925	44218234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44216969_44217449
transcript_158348.known	chr6	+	2358	14	FSM	ENSG00000112759.19	ENST00000651428.1	2358	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	778.926069974043	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTGTTTTTTTCTC	3	True	NA	61	True	TTTAAA	-4	NA	44219552	44234124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44219783_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_158351.known	chr6	+	2283	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	806.219110687578	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	12	True	NA	79	True	AATAAA	-18	NA	44219635	44234142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_158353.nic	chr6	+	2270	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_2	732.82803103929	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	3894	False	NA	79	True	AATAAA	-18	NA	44223517	44234142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44223642_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_158358.nic	chr6	+	2267	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	717.136762476081	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	3894	False	NA	79	True	AATAAA	-18	NA	44223517	44234142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_15837.known	chr1	-	517	3	FSM	ENSG00000132716.19	ENST00000407642.6	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGGAAGAAGAGCA	19	True	NA	-10	True	NA	NA	NA	160262448	160240101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160262275
transcript_158370.known	chr6	+	2301	14	FSM	ENSG00000112759.19	ENST00000371724.6	2301	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	781.121724143551	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	2	True	NA	78	True	AATAAA	-17	NA	44223799	44234141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223956_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_158376.known	chr6	+	1998	13	FSM	ENSG00000112759.19	ENST00000652680.1	1998	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	623.375683721747	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTCCATTCTCCCC	4	True	NA	123	True	NA	NA	NA	44219627	44233946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44219783_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_15838.known	chr1	-	439	3	FSM	ENSG00000132716.19	ENST00000419626.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	162.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCTCAGACCTGAGTT	145	False	NA	NA	False	NA	NA	NA	160262407	160240297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160262116
transcript_158396.known	chr6	+	2083	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_1	289.070925552882	2895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	16	True	NA	79	True	AATAAA	-18	NA	44223594	44234142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_158407.known	chr6	+	2030	13	FSM	ENSG00000112759.19	ENST00000652453.1	2030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	630.556544296826	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCCCCATGCCCAGT	-6	True	NA	-61	True	NA	NA	NA	44223791	44234002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223926_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_15841.known	chr1	-	728	3	FSM	ENSG00000132716.19	ENST00000447377.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCTGAAGGTGGTGGT	38	False	NA	NA	False	NA	NA	NA	160262514	160239783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160262448
transcript_15842.known	chr1	+	557	2	FSM	ENSG00000228606.3	ENST00000442130.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGGCCACTTCCTGGA	7	True	NA	4	True	AATAAA	-17	NA	160261743	160262778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160261923_160262400
transcript_158429.nic	chr6	+	2454	12	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-35	0	intron_retention	FALSE	canonical	3	1352	junction_1	301.911431377969	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	3900	False	NA	79	True	AATAAA	-18	NA	44223523	44234142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_15845.known	chr1	-	5318	33	FSM	ENSG00000122218.16	ENST00000241704.8	5318	33	0	0	0	0	multi-exon	TRUE	canonical	3	776	junction_19	67.2791526031653	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAAAAAGCTATTC	8	True	NA	-16	True	AATAAA	-28	NA	160343250	160288593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_15846.known	chr1	-	4664	33	FSM	ENSG00000122218.16	ENST00000368069.7	4664	33	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_17	161.106619272572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCATTTATTTCTTGG	10	True	NA	-12	True	AATAAA	-21	NA	160343248	160289272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305599_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_158462.known	chr6	+	1434	10	FSM	ENSG00000112759.19	ENST00000472176.2	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_1	326.564080641812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACAGCTGTATTCATG	16	True	NA	NA	False	NA	NA	NA	44223594	44232405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342
transcript_15847.known	chr1	-	4567	33	FSM	ENSG00000122218.16	ENST00000649787.1	4567	33	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_15	163.820544799599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTATGAGAGCTTCTTGA	0	True	NA	-32	True	AATAAA	-1	NA	160343258	160289292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298932_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_158539.known	chr6	+	2555	12	FSM	ENSG00000096384.20	ENST00000371646.10	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	11124	junction_7	1247.81411520935	10017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	0	True	NA	35	True	AATAAA	-21	NA	44247100	44253883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_158559.known	chr6	+	2674	12	FSM	ENSG00000096384.20	ENST00000371554.2	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3866.29600222998	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	415	False	NA	35	True	AATAAA	-21	NA	44247865	44253883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44248080_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_1586.nic	chr1	-	861	5	ISM	ENSG00000162585.17	ENST00000428120.5	2313	8	-34	5070	0	0	5prime_fragment	FALSE	canonical	3	110	junction_2	500.067245478046	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-9	True	NA	-14	True	ATTAAA	-40	NA	2194775	2189547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_2189782_2192844_2192976_2193638_2193911_2193997_2194134_2194687
transcript_15862.known	chr1	-	616	5	FSM	ENSG00000122218.16	ENST00000541366.1	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_1	89.7621858022631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGCAAAATAATAAATG	-1	True	NA	-40	True	NA	NA	NA	160343259	160333461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_158668.nic	chr6	+	947	6	ISM	ENSG00000096384.20	ENST00000371646.10	2555	12	-47	3436	-33	-3436	5prime_fragment	FALSE	canonical	3	11662	junction_5	1048.91593562115	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAGAAGATCAAAGAGAAA	513	False	NA	-1	True	AAGAAA	-2	NA	44247053	44250447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290
transcript_158684.known	chr6	-	2063	4	FSM	ENSG00000157593.19	ENST00000619636.4	2063	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	189.520447445652	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	8275	False	NA	-25	True	ATTAAA	-18	NA	44257352	44254101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257181
transcript_158685.known	chr6	-	2022	4	FSM	ENSG00000157593.19	ENST00000393812.4	2022	4	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	17.6131264181639	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCCTGTGTTTTGGTT	-10	True	NA	-24	True	ATTAAA	-19	NA	44257528	44254100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257399
transcript_158688.known	chr6	-	1859	3	FSM	ENSG00000157593.19	ENST00000495706.1	1859	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	199	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTGGTTGACTG	8073	False	NA	-19	True	ATTAAA	-24	NA	44257554	44254095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44255645_44256341_44256497_44257399
transcript_158692.known	chr6	-	1909	3	FSM	ENSG00000157593.19	ENST00000538577.5	1909	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	178	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	8056	False	NA	-25	True	ATTAAA	-18	NA	44257571	44254101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44255645_44256684_44256879_44257399
transcript_158694.known	chr6	-	2344	6	FSM	ENSG00000146232.17	ENST00000619360.6	2344	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	6.04648658313239	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGGTGCTATGAAGGG	-14	True	NA	-2	True	AATAAA	-17	NA	44265551	44258165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44259285_44260042_44260283_44260450_44260540_44261625_44261849_44262559_44262663_44264981
transcript_158697.nnic	chr6	-	4661	23	NNC	ENSG00000124608.5	novel	4798	22	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_1	18.3737595859507	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGCCCGCCTGGCATC	NA	False	NA	-20	True	AGTAAA	-14	NA	44313363	44298730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_44299361_44299513_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_158699.known	chr6	-	4798	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_16	12.8120903783866	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGCCCGCCTGGCATC	-17	True	NA	-20	True	AGTAAA	-14	NA	44313347	44298730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_15872.known	chr1	+	2822	17	FSM	ENSG00000162736.17	ENST00000294785.10	2822	17	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_8	31.9852871450297	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	-2	True	NA	13	True	ATTAAA	-16	NA	160343382	160358949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160351221_160351373_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_158733.nnic	chr6	-	2858	18	NNC	ENSG00000124608.5	novel	4798	22	NA	NA	-16	592	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	23.6341785231403	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGCAAGCTCCAGAAGG	NA	False	NA	NA	False	NA	NA	NA	44313363	44299979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_44300434_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_158738.known	chr6	+	4911	3	FSM	ENSG00000178233.18	ENST00000451188.7	4911	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTCCCAGTGTGGCA	4	True	NA	28	True	AATAAA	-20	NA	44270449	44279444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44270878_44273065_44273507_44275402
transcript_158740.known	chr6	+	6241	16	FSM	ENSG00000096401.8	ENST00000371477.4	6241	16	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_10	23.9707228834584	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCTTTTATGTTTA	-4	True	NA	NA	False	ATTAAA	-19	NA	44387705	44450425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654_44445868_44446606
transcript_158742.nic	chr6	+	2445	15	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-183	4718	-183	-4718	5prime_fragment	FALSE	canonical	3	267	junction_10	19.755133665011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGAAAATTTTGCTTG	-27	True	NA	13	True	NA	NA	NA	44387522	44445707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654
transcript_158743.nic	chr6	+	1825	13	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	4	23883	4	-23883	5prime_fragment	FALSE	canonical	3	267	junction_10	21.0033066179802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGAAGAACTAATCAAAAAA	0	True	NA	9	True	NA	NA	NA	44387709	44426542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481
transcript_158745.nic	chr6	+	863	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-183	46594	-183	-46594	5prime_fragment	TRUE	canonical	3	280	junction_3	19.6367003338137	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAACTTCGAGCAGCT	-27	True	NA	-22	True	NA	NA	NA	44387522	44403831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_158746.nic	chr6	+	1059	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-183	46398	-183	-46398	5prime_fragment	FALSE	canonical	3	280	junction_3	19.6367003338137	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGCCTTTCTGATTT	-27	True	NA	7	True	NA	NA	NA	44387522	44404027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_158752.known	chr6	-	3941	9	FSM	ENSG00000196284.17	ENST00000674231.1	3941	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	12.4241448397868	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGTTTACTTGTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	45106008	44826729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921
transcript_158753.known	chr6	+	4644	4	FSM	ENSG00000001561.7	ENST00000321037.5	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCACTGGTGATT	2	True	NA	103	True	AATAAA	-40	NA	46129988	46146688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_46130190_46139550_46140410_46141051_46141223_46143275
transcript_158756.known	chr6	-	3845	5	FSM	ENSG00000112796.10	ENST00000371383.7	3845	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	22.6163657557973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	-16	True	NA	-11	True	AATAAA	-23	NA	46170980	46159184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170052_46170115_46170807
transcript_158758.known	chr6	-	2544	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11.1455023315337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTGGATAAAACA	-7	True	NA	NA	False	ATTAAA	-20	NA	46170971	46160414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
transcript_158759.nic	chr6	-	1896	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-29	4310	-20	232	5prime_fragment	FALSE	canonical	3	54	junction_2	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTACATACAGATAA	5	True	NA	NA	False	AATAAA	-1	NA	46171000	46164724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_158761.known	chr6	-	3416	5	FSM	ENSG00000172348.16	ENST00000371374.6	3416	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	14.3003496460751	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTCCATGTGGTTTAA	6	True	NA	-18	True	AATATA	-14	NA	46491449	46220735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46223302_46246747_46246920_46248722_46248897_46456751_46456979_46491172
transcript_158763.known	chr6	-	1915	12	FSM	ENSG00000146070.17	ENST00000274793.12	1915	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	13.4600725748046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTGCAATGATACAAGA	12	True	NA	NA	False	ATTAAA	-23	NA	46735375	46704200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735179
transcript_158767.nnic	chr6	-	1491	11	NIC	ENSG00000146070.17	novel	1915	12	NA	NA	-56	-221	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	11.2004464196745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCAAAACTGTCT	288	False	NA	-10	True	ATTAAA	-16	NA	46735431	46704537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46735179
transcript_158777.known	chr6	-	3595	6	FSM	ENSG00000146072.6	ENST00000296861.2	3595	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	15.7175061635108	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTAGTCCGAGTATAT	1	True	NA	-18	True	AATAAA	-17	NA	47309905	47231531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_47232995_47234669_47234899_47253255_47253522_47283937_47284433_47285943_47286596_47309415
transcript_158781.known	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	517	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_47477200_47477600
transcript_158782.known	chr6	+	5412	18	FSM	ENSG00000198087.7	ENST00000359314.5	5412	18	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_9	31.6906544245251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACCCGTATGACTTT	23	True	NA	NA	False	AATAAA	-24	NA	47477788	47627263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926_47608029_47609122_47609305_47612472_47612537_47624185
transcript_158789.nic	chr6	+	2062	15	ISM	ENSG00000198087.7	ENST00000359314.5	5412	18	-37	19298	-37	-1548	5prime_fragment	FALSE	canonical	3	300	junction_9	24.7457479340659	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGACAGTGCCAACCT	-14	True	NA	NA	False	NA	NA	NA	47477751	47607965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926
transcript_158797.nic	chr6	+	788	3	ISM	ENSG00000198087.7	ENST00000359314.5	5412	18	-24	93519	-24	-11401	5prime_fragment	FALSE	canonical	3	318	junction_2	28	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAGAGTATGTAAA	-1	True	NA	NA	False	NA	NA	NA	47477764	47533744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_47478249_47503279_47503441_47533601
transcript_158799.known	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	20.637580338359	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-29	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
transcript_158801.nnic	chr6	-	2562	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	17	-1167	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_12	59.7291920997504	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTAAAAACTCTCTATAC	-12	True	NA	NA	False	AATAAA	-8	NA	49463236	49431526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_158802.known	chr6	+	1741	9	FSM	ENSG00000031691.7	ENST00000335783.4	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	30.1700907356939	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	-22	True	NA	80	True	AATAAA	-20	NA	49463369	49493107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_158805.nnic	chr6	+	1760	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	51.2054684579684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	-22	True	NA	80	True	AATAAA	-20	NA	49463369	49493107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_158819.nic	chr6	+	2134	4	NIC	ENSG00000197261.12	novel	1820	5	NA	NA	-536	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	20.7417989148054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACAATTTAGTTGTCT	NA	False	NA	-3	True	AATAAA	-12	NA	49550129	49561907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_49551676_49552467_49552571_49554876_49555158_49561703
transcript_158824.nic	chr6	+	2665	3	NIC	ENSG00000197261.12	novel	1820	5	NA	NA	-275	0	intron_retention	FALSE	canonical	0	0	junction_2	22	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACAATTTAGTTGTCT	NA	False	NA	-3	True	AATAAA	-12	NA	49550390	49561907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_49552571_49554876_49555158_49561703
transcript_158826.known	chr6	+	585	2	FSM	ENSG00000197261.12	ENST00000415078.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGGGACAGAAGACTAAGA	-7	True	NA	NA	False	AAGAAA	-27	NA	49551309	49552099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_49551676_49551880
transcript_158828.known	chr6	+	650	2	FSM	ENSG00000197261.12	ENST00000526429.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTATTAAAAGAAACAG	981	False	NA	NA	False	GATAAA	-37	NA	49552352	49555308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_49552571_49554876
transcript_158836.known	chr6	-	3208	17	FSM	ENSG00000112118.20	ENST00000616552.4	3208	17	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_6	191.805148115868	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTCATAGTGTGTT	NA	False	NA	-10	True	AATAAA	-24	NA	52284881	52264013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_158845.nic	chr6	-	3296	18	NIC	ENSG00000112118.20	novel	3208	17	NA	NA	57	-5	combination_of_known_junctions	FALSE	canonical	3	73	junction_2	829.173290706328	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCTTAATAGTCATAG	NA	False	NA	-16	True	AATAAA	-18	NA	52284824	52264019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_52264787_52265234_52265386_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_158869.known	chr6	-	3068	17	FSM	ENSG00000112118.20	ENST00000596288.7	3068	17	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_6	191.805148115868	5003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	-9	True	NA	-11	True	AATAAA	-23	NA	52284742	52264014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_158901.known	chr6	-	2523	16	FSM	ENSG00000112118.20	ENST00000419835.8	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_15	681.767083068371	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCGTCTCTGAACTTG	NA	False	NA	NA	False	NA	NA	NA	52284881	52264585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52284596
transcript_158963.known	chr6	+	6849	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	9.8264947972306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	-17	True	NA	33	True	AATAAA	-30	NA	52420341	52497198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_158964.known	chr6	+	2089	9	FSM	ENSG00000096093.16	ENST00000637263.1	2089	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	10.2225241501304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTCATGTGTATT	26	True	NA	4	True	CATAAA	-16	NA	52420313	52480139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639
transcript_158965.known	chr6	+	1896	6	FSM	ENSG00000096093.16	ENST00000637200.1	1896	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.9809711939578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATATCAGTCATATAT	-34	True	NA	NA	False	NA	NA	NA	52420253	52453543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52429968_52430132_52430227_52430375_52438303_52438592_52452687
transcript_158967.known	chr6	+	4004	10	FSM	ENSG00000096093.16	ENST00000637340.1	4004	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	8.14831649657738	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGATCTAAGATTGGT	NA	False	NA	-2	True	ACTAAA	-8	NA	52419742	52492497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_158968.known	chr6	+	2133	11	FSM	ENSG00000096093.16	ENST00000637089.1	2133	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	25.4025589262184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATACACTCCTTAAGTT	1	True	NA	-3	True	AATAAA	-12	NA	52420288	52495768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52495608
transcript_158969.known	chr6	+	4715	2	FSM	ENSG00000170915.9	ENST00000442253.3	4715	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTAGTGTCAGCAGTT	15	True	NA	21	True	ATTAAA	-18	NA	52362150	52407777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52362250_52403161
transcript_158976.known	chr6	-	7047	11	FSM	ENSG00000065308.5	ENST00000182527.4	7047	11	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_5	10.1237344888139	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATTGTCTCATAATTA	-21	True	NA	-4	True	AATAAA	-14	NA	52577060	52497407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52503271_52504590_52504755_52505598_52505743_52506031_52506137_52507552_52507624_52508233_52508319_52509527_52509587_52516005_52516123_52516627_52516738_52535782_52535847_52576795
transcript_158981.nnic	chr6	-	3850	10	NIC	ENSG00000065308.5	novel	7047	11	NA	NA	-24	-3111	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	29.8961164330382	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGACCATGAGTGGGG	NA	False	NA	NA	False	AAAACA	-9	NA	52577084	52500518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_52503271_52504590_52504755_52505598_52505743_52506031_52506137_52507552_52507624_52508233_52508319_52509527_52509587_52516005_52516123_52535782_52535847_52576795
transcript_158984.known	chr6	+	2162	4	FSM	ENSG00000225791.7	ENST00000666605.1	2162	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9.80929264637478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAATGCTAAAATTGAC	NA	False	NA	1	True	AATAAA	-2	NA	52577180	52583974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52577652_52578049_52578394_52579374_52579610_52582862
transcript_158985.known	chr6	+	2319	4	FSM	ENSG00000225791.7	ENST00000658849.1	2319	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	10.077477638554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	NA	False	NA	7	True	AATAAA	-8	NA	52577230	52583980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52577652_52578049_52578595_52579374_52579610_52582862
transcript_158988.known	chr6	+	2744	3	FSM	ENSG00000225791.7	ENST00000663931.1	2744	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	NA	False	NA	7	True	AATAAA	-8	NA	52577203	52583980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52578595_52579374_52579610_52582862
transcript_158990.known	chr6	+	3589	3	FSM	ENSG00000216775.4	ENST00000643631.2	3591	3	0	2	0	-2	multi-exon	FALSE	canonical	3	73	junction_2	14.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTATTTTATTTT	148	False	NA	20	True	AATAAA	-16	NA	52664365	52669153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52665420_52666388_52666519_52666748
transcript_158991.known	chr6	+	3757	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	0	True	NA	22	True	AATAAA	-18	NA	52664429	52669155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52665420_52666388
transcript_158992.known	chr6	+	988	5	FSM	ENSG00000096092.6	ENST00000211314.5	988	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	19.0065778087482	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	-13	True	NA	17	True	AATAAA	-18	NA	52671112	52686588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52671246_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_158996.known	chr6	-	1218	7	FSM	ENSG00000243955.6	ENST00000334575.6	1218	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.22812904711937	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGATTCTGTCTGCTGTG	-1	True	NA	NA	False	GATAAA	-28	NA	52803816	52791370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52791981_52792855_52792988_52794124_52794267_52796181_52796315_52797585_52797638_52799180_52799298_52803784
transcript_159000.known	chr6	-	1240	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	17.4037033096088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	27	True	NA	-14	True	AATAAA	-17	NA	52995284	52977952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
transcript_159003.known	chr6	-	1127	6	FSM	ENSG00000170899.11	ENST00000477599.5	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.4726611302682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	7	True	NA	-14	True	AATAAA	-17	NA	52995304	52977952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52987356_52987409_52994156_52994262_52995248
transcript_159004.known	chr6	-	379	3	FSM	ENSG00000170899.11	ENST00000457564.1	379	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	89.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAAACTATGTATTA	2	True	NA	NA	False	NA	NA	NA	52994261	52982573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52982706_52984463_52984606_52994156
transcript_159008.known	chr6	-	6146	14	FSM	ENSG00000112144.16	ENST00000676107.1	6146	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	8.11893833966693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGAGTGTTCTGTTT	-19	True	NA	NA	False	AATAAA	-19	NA	53061824	53001302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53061595
transcript_159009.known	chr6	+	4743	13	FSM	ENSG00000112146.17	ENST00000323557.12	4743	13	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	98.8078944214479	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCATACTTCTTGTAT	-8	True	NA	5	True	AATAAA	-17	NA	53065403	53100873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_159019.nic	chr6	-	644	2	ISM	ENSG00000112144.16	ENST00000676107.1	6146	14	-142	39833	-142	-39825	5prime_fragment	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGATCCTTCACTG	NA	False	NA	NA	False	ATTAAA	-3	NA	53061966	53041135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_53041409_53061595
transcript_159020.known	chr6	-	6227	15	FSM	ENSG00000112144.16	ENST00000356971.3	6227	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	17.7597343241757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTGATTTGAGTG	3	True	NA	NA	False	AATAAA	-11	NA	53061802	53001310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53060935_53061047_53061595
transcript_159023.known	chr6	-	2765	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_4	32.7326835353989	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTGCATTTTACAT	-12	True	NA	-16	True	ATTAAA	-14	NA	53348950	53267403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_159025.known	chr6	-	580	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	406.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAGATTTGTGTGTATT	12	True	NA	-17	True	AATAAA	-32	NA	53348926	53294087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53294492_53295641_53295708_53348816
transcript_159027.known	chr6	-	3785	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_11	22.3262675389825	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTGTGTGTGAGTT	-1	True	NA	-4	True	AATAAA	-28	NA	53545101	53497340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
transcript_159035.known	chr6	-	2289	16	FSM	ENSG00000001084.13	ENST00000643939.1	2289	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	73.1207828793489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGACTACCTGGGAC	467	False	NA	-67	True	NA	NA	NA	53544633	53498386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516241_53520777_53520961_53522414_53522528_53544495
transcript_159037.known	chr6	+	3159	14	FSM	ENSG00000137269.15	ENST00000370888.6	3159	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_6	15.1411504803903	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTTTTTAAAATTATTAC	21	True	NA	15	True	AATAAA	-23	NA	53795004	53924125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_53795416_53842109_53842228_53878992_53879072_53882886_53882977_53896497_53896555_53896828_53896893_53897284_53897360_53899746_53899892_53902628_53902748_53904378_53904463_53913853_53913970_53919497_53919671_53920624_53920762_53922634
transcript_159038.known	chr6	-	514	4	FSM	ENSG00000227885.3	ENST00000662688.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	NA	False	NA	NA	False	AATAAA	-19	NA	53794319	53746408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53794172
transcript_159040.known	chr6	-	2449	9	FSM	ENSG00000146151.14	ENST00000274901.9	2449	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTGATTATGTTGCA	-4	True	NA	NA	False	AATAAA	-20	NA	55579192	55434372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_55435764_55439433_55439560_55495418_55495608_55499235_55499300_55514047_55514197_55516507_55516604_55541728_55541837_55542059_55542141_55578947
transcript_159041.known	chr6	-	4173	30	FSM	ENSG00000124749.17	ENST00000244728.10	4173	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	6.49082403633238	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-24	True	NA	NA	False	AATAAA	-18	NA	56247580	56056589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56164813_56164823_56166905_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
transcript_159057.nic	chr6	-	1714	10	ISM	ENSG00000151914.22	ENST00000361203.7	22431	98	-715	187145	-203	-3926	5prime_fragment	FALSE	canonical	2	8	junction_2	2.82842712474619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACGTCTATATAAATTA	8339	False	NA	NA	False	AAGAAA	-37	NA	56843868	56646112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_159061.known	chr6	-	735	6	FSM	ENSG00000151914.22	ENST00000521821.1	735	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.00665927567458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCCATGCCTGTAATCC	9061	False	NA	NA	False	AATAAA	-17	NA	56843146	56670487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_159064.known	chr6	+	3497	4	FSM	ENSG00000151917.18	ENST00000370748.7	3497	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.65685424949238	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATAAGGGAGTTAATA	-3	True	NA	NA	False	AATAAA	-15	NA	56955125	57010944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_56955461_56981710_56981931_56992377_56992556_57008180
transcript_159065.known	chr6	+	2789	4	FSM	ENSG00000168116.14	ENST00000370733.5	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	58.7896438347965	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGGCTCTTGTCTTT	-1	True	NA	24	True	AATAAA	-25	NA	57046692	57055225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685
transcript_159075.known	chr6	+	5088	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	60.5099502696264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	26	True	NA	14	True	AGTAAA	-20	NA	57090187	57170305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_159077.known	chr6	+	3402	11	FSM	ENSG00000112200.17	ENST00000444273.6	3402	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	69.9899992856122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	57090112	57151371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718
transcript_159078.known	chr6	+	4998	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	92.1278376037257	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	NA	False	NA	15	True	ATTAAA	-17	NA	57090029	57170201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_159080.known	chr6	-	4830	7	FSM	ENSG00000112210.12	ENST00000468148.6	4830	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	24.9109525220445	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGATATGTATGAT	-20	True	NA	0	True	AATAAA	-19	NA	57222307	57186991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221725
transcript_159087.known	chr6	+	9478	4	FSM	ENSG00000112200.17	ENST00000370708.8	9478	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	169.534657223825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTCTTTTCTCAAGTAC	-1	True	NA	NA	False	ATTAAA	-20	NA	57090075	57109716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57100602
transcript_159092.known	chr6	+	6651	3	FSM	ENSG00000112208.11	ENST00000370693.5	6651	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	16.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGGTTTTATAAGTG	6	True	NA	5	True	AATAAA	-16	NA	57172325	57189833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57172811_57182031_57182142_57183777
transcript_159097.known	chr6	+	458	4	FSM	ENSG00000112200.17	ENST00000370702.5	458	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	188.337168102552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTCATTTGTCTAACTT	0	True	NA	NA	False	AATAAA	-17	NA	57090076	57124523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124428
transcript_159101.known	chr6	+	2303	14	FSM	ENSG00000146143.19	ENST00000615550.5	2303	14	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	15.7960372530394	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	7	True	NA	27	True	AATAAA	-13	NA	57317629	57646850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_159109.known	chr6	+	2197	7	FSM	ENSG00000146143.19	ENST00000419977.4	2197	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	5.7662812973354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCATGTGGGATGAAG	5	True	NA	NA	False	AAAAAG	-27	NA	57317627	57383589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030
transcript_159111.known	chr6	-	1666	6	FSM	ENSG00000215190.9	ENST00000418368.1	1666	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.30555310817378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	6	True	NA	-6	True	AATAAA	-20	NA	57961380	57946077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_57947178_57948872_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
transcript_159113.known	chr6	-	1621	6	FSM	ENSG00000215190.9	ENST00000399751.6	1621	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.81280999384984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	6	True	NA	-6	True	AATAAA	-20	NA	57961380	57946077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_57947178_57948917_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
transcript_159120.known	chr6	-	2403	10	FSM	ENSG00000112232.10	ENST00000675091.1	2403	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	64.2785220354492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAAGCTTTATCTTGC	-29	True	NA	-13	True	AATAAA	-15	NA	62286225	61679960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_61681061_61697194_61697254_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_159124.known	chr6	-	2329	9	FSM	ENSG00000112232.10	ENST00000281156.5	2329	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59.6896923681133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAAGCTTTATCTTGC	-29	True	NA	-13	True	AATAAA	-15	NA	62286225	61679960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_61681061_61697194_61697254_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_159126.nnic	chr6	-	1773	9	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	-10	-20298	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	46.8954955192927	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATACCACTTGATGCTGT	NA	False	NA	-9	True	AATAAA	-15	NA	62286235	61700258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_159132.nnic	chr6	-	1784	7	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	-10	-69036	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	63.3377191463875	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAAATATTGA	NA	False	NA	NA	False	AAAAAG	-13	NA	62286235	61748996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_61749684_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_159134.known	chr6	+	4628	6	FSM	ENSG00000285976.2	ENST00000370651.7	4628	6	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_5	61.2418157797432	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGATTTTATTTTCAG	147	False	NA	5	True	AATAAA	-17	NA	63572471	63583587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_63572720_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
transcript_159136.known	chr6	+	4498	6	FSM	ENSG00000285976.2	ENST00000673217.1	4498	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	277.71611404454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGGAAGGAAAGTAAGGG	-6	True	NA	69	True	NA	NA	NA	63572548	63583436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_63572818_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
transcript_159138.nic	chr6	+	3006	6	ISM	ENSG00000118482.12	ENST00000262043.8	18797	16	-26	31321	-26	0	5prime_fragment	FALSE	canonical	3	32	junction_1	36.2877389761335	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAGTGAAAAAA	0	True	NA	NA	False	NA	NA	NA	63635775	63694690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_63636151_63646526_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580
transcript_159139.nic	chr6	+	2699	5	ISM	ENSG00000118482.12	ENST00000481385.6	2787	6	-9	3555	-6	0	5prime_fragment	FALSE	canonical	3	38	junction_1	34.5832329315812	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAGTGAAAAAA	-6	True	NA	NA	False	NA	NA	NA	63635813	63694690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580
transcript_159150.known	chr6	-	3900	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	34.7118935749054	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGTGGCATTTTGT	-17	True	NA	NA	False	AATAAA	-19	NA	69797010	69674009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_159157.known	chr6	-	2957	33	FSM	ENSG00000112280.18	ENST00000683980.1	2957	33	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	34.5316883456341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAACATTACTTAACTA	160	False	NA	-30	True	TATAAA	-44	NA	70283105	70216059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254739_70254770_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_159162.known	chr6	-	2548	33	FSM	ENSG00000112280.18	ENST00000644493.1	2548	33	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_29	36.938491420705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAGTCATCAGTTAAAA	20	False	NA	NA	False	NA	NA	NA	70283245	70216683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70279515_70279621_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_159163.known	chr6	-	3051	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_28	12.6477943275797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	56	False	NA	-10	True	ATTAAA	-14	NA	70283209	70216039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_159189.known	chr6	+	5042	22	FSM	ENSG00000082269.17	ENST00000361499.7	5042	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	39.7023506103975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATTTTTGCTAAATTG	82	False	NA	NA	False	GATAAA	-39	NA	70413577	70560659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524930_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
transcript_159192.nic	chr6	+	1998	16	NIC	ENSG00000082269.17	novel	6215	22	NA	NA	20	-72	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	42.1025203785025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAATGAAGAATCAAA	-51	True	NA	NA	False	NA	NA	NA	70413444	70524527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342
transcript_159203.nnic	chr6	+	742	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5235010054732	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	-16	True	NA	19	True	AATAAA	-16	NA	70566903	70589569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588859_70589325
transcript_159204.nnic	chr6	+	716	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.5235010054732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	-16	True	NA	19	True	AATAAA	-16	NA	70566903	70589569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588884_70589376
transcript_159205.nnic	chr6	+	885	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.5235010054732	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	-16	True	NA	19	True	AATAAA	-16	NA	70566903	70589569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588961_70589284
transcript_159208.known	chr6	+	1183	3	FSM	ENSG00000154079.6	ENST00000370474.4	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	6	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	10	True	NA	19	True	AATAAA	-16	NA	70566929	70589569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70567005_70579413_70579567_70588614
transcript_159210.known	chr6	+	3214	11	FSM	ENSG00000112305.15	ENST00000370455.8	3214	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	114.619544581193	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTTAAAATCCTGGTG	-14	True	NA	2	True	AATAAA	-10	NA	70667882	70862003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70791688_70791770_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_159211.known	chr6	+	2403	10	FSM	ENSG00000112305.15	ENST00000316999.9	2403	10	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_4	47.9351413659935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCATTTGTGGGTTT	-18	True	NA	17	True	ATTAAA	-14	NA	70667775	70861166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_159214.nic	chr6	+	659	4	ISM	ENSG00000112305.15	ENST00000370452.7	2491	11	3	87741	3	-18344	5prime_fragment	FALSE	canonical	3	311	junction_1	20.4178571081514	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACCTTCATCTC	-15	True	NA	NA	False	GATAAA	-22	NA	70667778	70773425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349
transcript_159216.known	chr6	-	6587	4	FSM	ENSG00000112309.11	ENST00000230053.11	6587	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	7.11805216802087	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTACTTCTTAATTTG	-13	True	NA	NA	False	TATAAA	-15	NA	70957060	70856678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70861750_70861829_70861979_70894127_70894273_70955838
transcript_159219.known	chr6	+	8492	7	FSM	ENSG00000119900.9	ENST00000370435.5	8492	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	15.5179107986725	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAAGTTATTTTTATT	-1	True	NA	NA	False	AATAAA	-22	NA	71288810	71309059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_71289171_71293292_71293380_71293532_71293612_71296316_71296396_71296494_71296562_71296671_71296818_71301385
transcript_159221.known	chr6	-	1430	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	9.41740410091868	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	7920	False	NA	-3	True	AATAAA	-22	NA	73310215	73241313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
transcript_159227.known	chr6	-	2053	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTGGCTATTATTGTC	7992	False	NA	NA	False	AATAAA	-12	NA	73310143	73274138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73275557_73291997_73292041_73309551
transcript_159229.known	chr6	+	2482	3	FSM	ENSG00000229852.4	ENST00000662430.1	2482	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCGAGACTCCGTAAAAAAA	-34	True	NA	NA	False	NA	NA	NA	73263211	73301203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73263417_73270397_73270528_73299056
transcript_159232.known	chr6	-	1134	4	FSM	ENSG00000135314.13	ENST00000257765.9	1134	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.5854314646552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	7	True	NA	-3	True	AATAAA	-22	NA	73263184	73241313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73262773
transcript_159233.known	chr6	-	659	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCAGTGTGGTTGATGG	-7	True	NA	NA	False	AATAAA	-17	NA	73354276	73353062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73353379_73353852_73354033_73354113
transcript_159235.known	chr6	-	1595	6	FSM	ENSG00000164430.17	ENST00000680833.1	1595	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.68562030024339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACGCCTGGCTGAAAT	146	False	NA	NA	False	NA	NA	NA	73452181	73424167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73424431_73425463_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
transcript_159237.known	chr6	-	3201	5	FSM	ENSG00000164430.17	ENST00000370315.4	3201	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	3.20156211871642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTTGCTTTATACA	-18	True	NA	-15	True	AATAAA	-17	NA	73452297	73423710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
transcript_15924.known	chr1	+	5354	8	FSM	ENSG00000162738.6	ENST00000368061.3	5354	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	15.9552946877025	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCATTCTGTTGCTTT	-22	True	NA	16	True	AATAAA	-16	NA	160400563	160428670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160400870_160415647_160415909_160416061_160416183_160419001_160419610_160420410_160420548_160421051_160421188_160424051_160424284_160425117
transcript_159240.known	chr6	+	3721	13	FSM	ENSG00000135297.17	ENST00000679418.1	3721	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	91.74553425402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-11	True	NA	NA	False	NA	NA	NA	73461736	73502427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159243.known	chr6	+	4239	13	FSM	ENSG00000135297.17	ENST00000679411.1	4239	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	90.9552316618822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-11	True	NA	NA	False	NA	NA	NA	73461736	73502427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480368_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159244.known	chr6	+	3945	13	FSM	ENSG00000135297.17	ENST00000679627.1	3945	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	70.508224500566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480317_73480368_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159245.known	chr6	+	2837	13	FSM	ENSG00000135297.17	ENST00000415954.6	2837	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	76.2052692112268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTTTTGAGAGTTAATA	9166	False	NA	14	True	ATTAAA	-15	NA	73461577	73501096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73480996_73481117_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159246.known	chr6	+	3629	12	FSM	ENSG00000135297.17	ENST00000681509.1	3629	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	71.3277848566881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159249.known	chr6	+	3774	12	FSM	ENSG00000135297.17	ENST00000680544.1	3774	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	89.4014994235195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-3	True	NA	NA	False	NA	NA	NA	73461744	73502427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159250.known	chr6	+	3884	12	FSM	ENSG00000135297.17	ENST00000681624.1	3884	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.2349394777176	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-11	True	NA	NA	False	NA	NA	NA	73461736	73502427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466213_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159252.known	chr6	+	3787	12	FSM	ENSG00000135297.17	ENST00000680428.1	3787	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	74.5444567560718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-1	True	NA	NA	False	NA	NA	NA	73461746	73502427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73480038_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159253.known	chr6	+	2685	11	FSM	ENSG00000135297.17	ENST00000681705.1	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	78.3045337129339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATGGATACTTATTTG	-17	True	NA	NA	False	TATAAA	-43	NA	73461730	73501367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73500573
transcript_159254.known	chr6	+	2240	11	FSM	ENSG00000135297.17	ENST00000415228.5	2240	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	62.5843430899454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTTTTGAGAGTTAATA	17	True	NA	14	True	ATTAAA	-15	NA	73461764	73501096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_159288.known	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	7809.54682110431	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	6706	False	NA	-5	True	ATTAAA	-17	NA	73520214	73517514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
transcript_159290.known	chr6	-	3694	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	0	0	0	multi-exon	FALSE	canonical	2	218	junction_7	7746.22119329872	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAGCTTTAAGATGA	6329	False	NA	-21	True	AATAAA	-3	NA	73520591	73515764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
transcript_159291.known	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	7816.01719652193	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5935	False	NA	-5	True	ATTAAA	-17	NA	73520985	73517514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
transcript_159292.known	chr6	-	1731	8	FSM	ENSG00000156508.19	ENST00000678703.1	1731	8	0	0	0	0	multi-exon	FALSE	canonical	2	215	junction_6	7817.65402986166	22195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAACCTGTGTGTTCCT	15	True	NA	-12	True	ATTAAA	-10	NA	73521032	73517521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519508_73519882_73520057_73520999
transcript_159293.known	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_7	7595.85713076677	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5080	False	NA	-5	True	ATTAAA	-17	NA	73521840	73517514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
transcript_159294.known	chr6	-	2079	8	FSM	ENSG00000156508.19	ENST00000455918.2	2079	8	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_7	7789.11602749605	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	3105	False	NA	-9	True	ATTAAA	-13	NA	73523815	73517518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523446
transcript_1593.known	chr1	-	811	4	FSM	ENSG00000162585.17	ENST00000400918.7	811	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	512.693107250548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTCCCAGCAGCGCCC	311	False	NA	NA	False	NA	NA	NA	2194751	2185174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2185514_2193638_2193911_2193997_2194134_2194687
transcript_159310.known	chr6	-	1849	7	FSM	ENSG00000156508.19	ENST00000495333.6	1849	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3055.07144851893	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	15	True	NA	-11	True	ATTAAA	-11	NA	73521032	73517520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519517_73519882_73520057_73520999
transcript_159311.known	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3054.38335293176	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	16	True	NA	-9	True	ATTAAA	-13	NA	73521031	73517518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
transcript_159315.known	chr6	-	2177	7	FSM	ENSG00000156508.19	ENST00000490569.6	2177	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2648.26224469305	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5547	False	NA	-5	True	ATTAAA	-17	NA	73521373	73517514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
transcript_159316.known	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2625.46944479565	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	15	True	NA	-5	True	ATTAAA	-17	NA	73521032	73517514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
transcript_15932.known	chr1	-	1161	8	FSM	ENSG00000158764.7	ENST00000368029.4	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	23.932728849926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	2	True	NA	-5	True	ACTAAA	-17	NA	160954809	160945024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954386_160954451_160954726
transcript_159339.known	chr6	-	1823	8	FSM	ENSG00000156508.19	ENST00000677236.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	1	220	junction_7	7745.54043120482	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	12	True	NA	-9	True	ATTAAA	-13	NA	73523837	73517518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523724
transcript_159341.known	chr6	-	3292	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.46361453145678	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-26	True	NA	-7	True	AATAAA	-15	NA	73653992	73593378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_159349.known	chr6	+	9031	33	FSM	ENSG00000156535.15	ENST00000287097.6	9031	33	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_25	5.70087712549569	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTATGTGTTCTTTTTA	24	True	NA	7	True	AATAAA	-19	NA	73696202	73828313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73696290_73697399_73697573_73723250_73723280_73730343_73730575_73736382_73736509_73756642_73756683_73758943_73759029_73762383_73762481_73762740_73762883_73763575_73763686_73765929_73766155_73766758_73766861_73766947_73767011_73768054_73768232_73771428_73771582_73780423_73780499_73781258_73781320_73782613_73782756_73783706_73783825_73785363_73785478_73787233_73787453_73788467_73788613_73792625_73792803_73803219_73803302_73806843_73807073_73808082_73808249_73809983_73810175_73810991_73811148_73812204_73812271_73814980_73815124_73818387_73818536_73820460_73820564_73823457
transcript_159352.known	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3113.95464892403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-8	True	NA	-22	True	AATAAA	-16	NA	75243801	75237786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
transcript_159353.known	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	2861.72818803992	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	6	True	NA	-22	True	AATAAA	-16	NA	75243787	75237786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
transcript_159354.known	chr6	-	773	4	FSM	ENSG00000112695.13	ENST00000370089.6	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	6020	junction_3	437.790665348939	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCAACATTATTGTGA	6303	False	NA	-13	True	ACTAAA	-5	NA	75244009	75237683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75240300_75240386_75241175_75241266_75243716
transcript_159357.known	chr6	-	325	3	FSM	ENSG00000112695.13	ENST00000472311.6	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	2847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAACTGCCACCAATAA	8	True	NA	-58	True	GATAAA	-40	NA	75243785	75237822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75241175_75241266_75243716
transcript_159358.known	chr6	-	357	3	FSM	ENSG00000112695.13	ENST00000460985.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	3235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTCTGATTTTATCA	5	True	NA	-24	True	AATAAA	-14	NA	75243788	75237788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75240300_75240386_75243716
transcript_159359.known	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	TRUE	canonical	3	722	junction_2	72.4931031202279	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-26	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
transcript_159363.known	chr6	-	2791	6	FSM	ENSG00000112697.17	ENST00000475111.6	2791	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	332.02530024081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACAATGTAATGGTT	NA	False	NA	NA	False	AATATA	-17	NA	75284948	75254598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75284401
transcript_159367.known	chr6	-	3764	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAACAGAGTTTTACTT	0	True	NA	-2	True	AATAAA	-22	NA	75334790	75308087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75308898_75312396_75315203_75334642
transcript_159373.nic	chr6	+	4415	25	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	125.750904293192	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	-16	True	NA	7	True	AATAAA	-19	NA	75601863	75715904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706_75634812_75640686_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_159380.known	chr6	+	6671	24	FSM	ENSG00000112701.18	ENST00000447266.7	6671	24	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	90.5783141921418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAAGAGTTTGGTGG	0	True	NA	NA	False	AATAAA	-21	NA	75601879	75718281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_159384.nic	chr6	+	4307	24	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	245	junction_5	76.9516579155682	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	-16	True	NA	7	True	AATAAA	-19	NA	75601863	75715904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640686_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_159386.known	chr6	+	4644	23	FSM	ENSG00000112701.18	ENST00000370010.6	4644	23	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_5	97.1188247236471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	7	True	AATAAA	-19	NA	75601508	75715904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_15939.nic	chr1	-	1107	5	ISM	ENSG00000158764.7	ENST00000368029.4	1161	8	3312	0	-23	0	3prime_fragment	FALSE	canonical	3	86	junction_4	6.22494979899437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	3342	False	NA	-5	True	ACTAAA	-17	NA	160951497	160945024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042
transcript_159404.known	chr6	+	2700	15	FSM	ENSG00000112701.18	ENST00000327284.12	2700	15	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	114.920846761622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTATGTCTTTGTTTT	-1	True	NA	12	True	ATTAAA	-17	NA	75601926	75678975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
transcript_159414.known	chr6	+	867	6	FSM	ENSG00000112701.18	ENST00000493959.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	167.20119616797	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATTCTAATTGTCTT	77	False	NA	NA	False	AGTAAA	-16	NA	75602223	75634811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706
transcript_159416.nic	chr6	+	1143	6	NIC	ENSG00000112701.18	novel	867	6	NA	NA	-23	5647	combination_of_known_junctions	FALSE	canonical	3	245	junction_5	84.9719953867155	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGCTTAATATTGAAGA	-23	True	NA	NA	False	AAGAAA	-1	NA	75601856	75640703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640686
transcript_15942.known	chr1	-	2096	13	FSM	ENSG00000270149.5	ENST00000289779.7	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	583.810965172423	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGCTGGTGGCTTAGG	11	True	NA	NA	False	AAAAAG	-13	NA	161038944	160997956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009_161021113_161021387_161021488_161022749_161022828_161038879
transcript_159425.known	chr6	+	5598	32	FSM	ENSG00000196586.17	ENST00000369975.6	5598	32	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_13	23.3010430156924	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCGCCTTTAACTGGT	-5	True	NA	4	True	AGTAAA	-21	NA	75749234	75916612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75907604_75907709_75908495_75908628_75914062_75914282_75914812
transcript_159426.known	chr6	+	3122	28	FSM	ENSG00000196586.17	ENST00000627432.3	3122	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	60.4440586407441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCAAAGAGAAAACAA	-4	True	NA	0	True	NA	NA	NA	75749235	75891238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227
transcript_159429.nic	chr6	+	3034	27	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-64	1114	-29	0	5prime_fragment	FALSE	canonical	0	0	junction_10	61.547319074084	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAGTGCATTACAGAAAA	809	False	NA	39	True	NA	NA	NA	75749171	75890124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_159430.nic	chr6	+	3092	27	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-64	1056	-29	0	5prime_fragment	FALSE	canonical	0	0	junction_10	61.547319074084	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAAGAAGAAATGGAAAA	809	False	NA	-54	True	AAAACA	-32	NA	75749171	75890182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_159431.nic	chr6	+	3175	27	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-64	973	-29	83	5prime_fragment	FALSE	canonical	0	0	junction_10	61.547319074084	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCATTTATATTATTT	809	False	NA	29	True	AAGAAA	-22	NA	75749171	75890265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_159433.nic	chr6	+	3083	26	ISM	ENSG00000196586.17	ENST00000369975.6	5598	32	-63	26430	-29	0	5prime_fragment	FALSE	canonical	3	148	junction_13	22.3038651358907	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAAGAAGAAATGGAAAA	809	False	NA	-54	True	AAAACA	-32	NA	75749171	75890182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_159435.nic	chr6	+	2724	24	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-64	9420	-29	-5089	5prime_fragment	FALSE	canonical	0	0	junction_10	64.955648675816	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTTTTCCTTTACAC	809	False	NA	23	True	AAGAAA	-32	NA	75749171	75881818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688
transcript_159439.nic	chr6	+	2134	18	ISM	ENSG00000196586.17	ENST00000663400.1	3140	27	38	23107	0	-19844	5prime_fragment	FALSE	canonical	3	148	junction_13	23.6505704152957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAAAACTTAGCTTCAT	-1	True	NA	NA	False	ACTAAA	-7	NA	75749238	75867063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931
transcript_159443.known	chr6	+	627	2	FSM	ENSG00000280511.1	ENST00000626131.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	0	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGACTCTCTTTTCGG	NA	False	NA	-41	True	TATAAA	-21	NA	76561327	76562590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_76561668_76562303
transcript_159447.nic	chr6	-	2987	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-33	48468	-33	-42341	5prime_fragment	FALSE	canonical	3	187	junction_13	25.5477190843571	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGTTTTTAACATTAC	NA	False	NA	NA	False	AAAAAG	-24	NA	79078287	78982886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_159448.nic	chr6	-	3161	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-272	48533	-272	-42406	5prime_fragment	FALSE	canonical	3	187	junction_13	25.5477190843571	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATGAAGAAAAAGATGG	NA	False	NA	NA	False	ATTAAA	-16	NA	79078526	78982951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_159450.nic	chr6	-	2503	20	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-15	56466	-15	-50339	5prime_fragment	FALSE	canonical	3	187	junction_10	19.1051906624694	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCACTGTCTCAAAGGTA	-7	True	NA	72	True	AATAAA	-2	NA	79078269	78990884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_159451.nic	chr6	-	2686	20	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-272	56540	-272	-50413	5prime_fragment	FALSE	canonical	3	187	junction_10	19.1051906624694	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAGAAGAAGAAATAAAGA	NA	False	NA	-2	True	NA	NA	NA	79078526	78990958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_159454.known	chr6	+	5577	4	FSM	ENSG00000146243.14	ENST00000369940.7	5577	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4.98887651569859	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGTAAGTTGGTTC	4	True	NA	17	True	AATGAA	-18	NA	78867550	78903102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_78867892_78885377_78885444_78897828_78897960_78898063
transcript_159458.known	chr6	-	1010	7	FSM	ENSG00000118418.14	ENST00000620514.1	1010	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2097.20253485976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTGACTCTTAGTA	NA	False	NA	-10	True	AATAAA	-17	NA	79234738	79201248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79201727_79202062_79202156_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_159460.known	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_1	1191.48942085106	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_159461.known	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2691	junction_1	729.049627940376	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_159467.nic	chr6	-	1444	5	NIC	ENSG00000118418.14	novel	1010	7	NA	NA	23	1	intron_retention	FALSE	canonical	3	4244	junction_3	142.007702255899	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACCTGACTCTTAGTAT	-44	True	NA	-9	True	AATAAA	-18	NA	79234715	79201247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_159470.known	chr6	+	2946	2	FSM	ENSG00000270362.2	ENST00000604516.2	2965	2	19	0	19	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGCTTGCTTGTTGGAT	13	False	NA	4	True	AATAAA	-16	NA	79233717	79236797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_79233928_79234061
transcript_159474.known	chr6	+	4603	4	FSM	ENSG00000198478.8	ENST00000369838.6	4603	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	8.99382504215469	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTCTGTCACCTCC	0	True	NA	20	True	AATAAA	-16	NA	79631328	79703655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_79631507_79673613_79673800_79696484_79696566_79699497
transcript_159476.known	chr6	-	3013	6	FSM	ENSG00000118402.6	ENST00000369816.5	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	15.0519101777814	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTTTTTTTGTTAAT	-2	True	NA	-4	True	AATAAA	-23	NA	79947553	79914813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79916884_79919419_79919548_79921624_79921797_79924951_79925033_79926193_79926382_79947179
transcript_159480.known	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_8	33.7863099380359	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	-6	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_159493.known	chr6	+	1514	11	FSM	ENSG00000083123.15	ENST00000356489.9	1514	11	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_10	67.1997767853436	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCAAATTGTCTTTG	8	True	NA	-13	True	AATAAA	-1	NA	80106646	80346254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80345974
transcript_159499.known	chr6	+	3668	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	38.7817571979149	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	-6	True	NA	3	True	AATAAA	-17	NA	80106670	80346270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
transcript_159502.known	chr6	-	5664	3	FSM	ENSG00000112773.16	ENST00000369754.7	5664	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	515	False	NA	-1	True	AATAAA	-22	NA	81752708	81745729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_81750472_81751589_81752179_81752375
transcript_159503.known	chr6	-	5582	3	FSM	ENSG00000112773.16	ENST00000320172.11	5582	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	-7	True	NA	-1	True	AATAAA	-22	NA	81752681	81745729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_81750472_81751589_81752179_81752430
transcript_159504.known	chr6	-	5537	3	FSM	ENSG00000112773.16	ENST00000369756.3	5537	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	449	False	NA	-1	True	AATAAA	-22	NA	81752774	81745729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_81750472_81751589_81752179_81752568
transcript_159505.known	chr6	-	6040	29	FSM	ENSG00000005700.15	ENST00000306270.12	6040	29	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_23	21.51743479135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	-6	True	NA	-8	True	AGTAAA	-18	NA	82247744	82169986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_159506.nic	chr6	-	2702	12	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-23	22971	-23	-22971	5prime_fragment	FALSE	canonical	3	69	junction_6	14.3831857756844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGGAAGATGATCCTG	NA	False	NA	NA	False	AAAAAG	-8	NA	82247777	82214301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_159509.known	chr6	+	3392	3	FSM	ENSG00000146242.9	ENST00000535040.4	3392	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	110	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTCAATGTCTTA	-9	True	NA	NA	False	AATAAA	-22	NA	82363205	82367417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_82363540_82363645_82363909_82364622
transcript_15951.nnic	chr1	-	2076	11	NNC	ENSG00000158769.18	novel	4639	10	NA	NA	-7	-983	intron_retention	FALSE	non_canonical	0	0	junction_1	415.916686368797	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTTAAATCCTGAAGT	-9	True	NA	-11	True	AATAAA	-19	NA	161021182	160996193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_160996539_160998148_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_159511.nnic	chr6	+	2258	3	NNC	ENSG00000146242.9	novel	2881	2	NA	NA	-12	-502	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	34	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTCTTAAAAGAATTACAG	41	False	NA	NA	False	AATAAA	-1	NA	82364231	82366915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_82364330_82364622_82364736_82364868
transcript_159513.known	chr6	+	2881	2	FSM	ENSG00000146242.9	ENST00000543496.3	2881	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTCAATGTCTTA	-18	True	NA	NA	False	AATAAA	-22	NA	82364243	82367417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_82364330_82364622
transcript_159515.known	chr6	+	2890	2	FSM	ENSG00000146242.9	ENST00000369750.4	2890	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCAATGTCTTAATG	-5	True	NA	NA	False	AATAAA	-25	NA	82363816	82367420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_82363909_82364622
transcript_159525.known	chr6	-	1925	10	FSM	ENSG00000118420.17	ENST00000369747.8	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	13.0563829525052	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTCTATTCTTTG	-33	True	NA	-17	True	AATAAA	-24	NA	83065841	82892389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_159528.known	chr6	-	1246	10	FSM	ENSG00000118420.17	ENST00000509102.5	1246	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	34.8534852216929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCAGGAGGCATCAATT	-9	True	NA	NA	False	NA	NA	NA	83065751	82892952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022478_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_159530.known	chr6	-	3255	6	FSM	ENSG00000118420.17	ENST00000505226.1	3255	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	45.9190592238125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGTACAAAAAAAT	-15	True	NA	NA	False	NA	NA	NA	83065823	83036025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83063152_83063246_83065641
transcript_159536.known	chr6	+	7957	39	FSM	ENSG00000083097.15	ENST00000349129.7	7957	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	13.2043390836921	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTTTCAGACTTGGTT	-26	True	NA	18	True	AATATA	-21	NA	83067670	83168471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83067780_83096730_83096824_83096924_83097116_83100704_83100887_83108909_83109081_83110124_83110315_83113322_83113422_83118887_83118988_83119747_83119858_83120682_83120792_83121929_83122051_83122862_83122983_83124704_83124820_83125165_83125196_83125499_83125734_83128886_83129509_83130122_83130398_83132175_83132329_83134186_83134288_83135618_83135879_83137172_83139163_83139999_83140112_83140220_83140404_83141920_83142047_83145523_83145659_83147235_83147292_83148758_83148864_83151592_83151660_83151882_83152028_83152287_83152368_83153510_83153621_83153893_83154044_83154179_83154242_83155950_83156104_83157181_83157319_83158566_83158623_83159795_83159961_83162789_83162920_83167861
transcript_159537.known	chr6	-	2013	14	FSM	ENSG00000013375.16	ENST00000512866.5	2013	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	116.199125153292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATTTTCTCTATTCTA	19	True	NA	-5	True	AATAAA	-19	NA	83193231	83166129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83166467_83169241_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_159538.known	chr6	-	6079	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_7	30.6508111185042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCCTTTGACTTCA	-15	True	NA	3	True	AATAAA	-21	NA	83193265	83164872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_159544.known	chr6	-	1952	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	119.298179179548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTTCCGTTTA	-18	True	NA	2	True	ATTAAA	-22	NA	83193268	83169520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_159546.known	chr6	-	1893	12	FSM	ENSG00000013375.16	ENST00000650642.1	1893	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	125.272991159506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATCTTATTACCAAC	-7	True	NA	-30	True	NA	NA	NA	83193257	83168927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_159550.nnic	chr6	+	1451	4	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-8	-2403	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	24.7296493213219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACTTGTGAAGCTGATT	-20	True	NA	2	True	AATAAA	-10	NA	83193348	83196532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_83193444_83194311_83194653_83195194_83195272_83195594
transcript_159552.known	chr6	+	3769	3	FSM	ENSG00000013392.8	ENST00000369724.5	3769	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTTTTCATTCC	-12	True	NA	NA	False	AGTAAA	-20	NA	83193356	83198935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83193444_83194311_83194653_83195594
transcript_159557.nic	chr6	+	2237	2	NIC	ENSG00000013392.8	novel	3769	3	NA	NA	2	-2398	intron_retention	FALSE	canonical	3	61	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	-10	True	NA	7	True	AATAAA	-15	NA	83193358	83196537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_83194653_83195594
transcript_159559.known	chr6	-	3338	14	FSM	ENSG00000065833.9	ENST00000369705.4	3338	14	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	8.08461172509615	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCTTAAAATGTTACA	10	True	NA	-9	True	AATAAA	-18	NA	83431051	83210401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83212095_83216497_83216597_83223759_83223934_83227334_83227478_83228825_83228932_83237716_83237831_83239538_83239637_83253628_83253739_83315309_83315414_83346172_83346335_83352063_83352140_83398366_83398517_83407767_83407902_83430876
transcript_159563.known	chr6	+	2444	2	FSM	ENSG00000146250.7	ENST00000369700.4	2444	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTCTGGTTATTTTCC	9	True	NA	10	True	AATAAA	-22	NA	83512533	83525704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83512695_83523421
transcript_159564.known	chr6	+	664	4	FSM	ENSG00000203877.9	ENST00000369689.6	570	4	-94	0	-94	0	multi-exon	FALSE	canonical	2	4	junction_1	5.55777733351102	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	36	False	NA	NA	False	AATAAA	-17	NA	83853265	83857515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83853512_83853694_83853774_83854096_83854162_83857241
transcript_159565.known	chr6	-	1856	1	FSM	ENSG00000287705.1	ENST00000656981.1	1856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATTGTAAACTATAGT	NA	False	NA	NA	False	AATAAA	-33	NA	83854167	83852311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83852300_83854200
transcript_159566.known	chr6	+	9205	16	FSM	ENSG00000065615.14	ENST00000369681.10	9205	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_12	16.7052885837589	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTCTGTATTTT	5	True	NA	12	True	AATAAA	-15	NA	83859688	83967423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514_83940602_83955297_83955463_83959823
transcript_159572.known	chr6	+	2137	4	FSM	ENSG00000135324.6	ENST00000257776.5	2137	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	5.90668171555645	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	24	True	NA	15	True	AATAAA	-15	NA	84033771	84090881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_84033884_84055311_84055446_84062892_84062993_84089090
transcript_159573.known	chr6	-	5155	27	FSM	ENSG00000135315.12	ENST00000403245.8	5155	27	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	15.7924781736086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTATATAATGATTT	-15	True	NA	-12	True	AATAAA	-17	NA	84227643	84124249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_84125277_84126377_84126513_84146686_84146786_84149561_84149704_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169434_84171605_84171719_84174047_84174189_84174726_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_159581.known	chr6	-	2072	15	FSM	ENSG00000135315.12	ENST00000497936.5	2072	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.9331089117215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCTTCAAATTGAATCA	20	True	NA	NA	False	ACTAAA	-17	NA	84227608	84174771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_84174955_84175209_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_159582.known	chr6	+	3562	9	FSM	ENSG00000135318.12	ENST00000257770.8	3562	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1.79843682124227	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCTTTGATAGTTATT	8	True	NA	9	True	AATAAA	-16	NA	85450082	85495784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_85450479_85467059_85467283_85471236_85471426_85485234_85485433_85487334_85487490_85489493_85489600_85490507_85490658_85491976_85492178_85493840
transcript_159583.known	chr6	-	3427	29	FSM	ENSG00000135317.14	ENST00000684118.1	3427	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	67.7201907461421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	8165	False	NA	NA	False	TATAAA	-1	NA	85593901	85505527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507257_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_159584.known	chr6	-	3452	29	FSM	ENSG00000135317.14	ENST00000314673.8	3452	29	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_14	42.1632365978724	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	0	True	NA	NA	False	AATAAA	-29	NA	85593858	85505495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159585.known	chr6	-	3193	29	FSM	ENSG00000135317.14	ENST00000505648.5	3193	29	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_28	54.1462847576934	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	7910	False	NA	-15	True	AATAAA	-31	NA	85594156	85505797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_159587.known	chr6	-	4123	28	FSM	ENSG00000135317.14	ENST00000683857.1	4123	28	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_23	61.292480579456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATAGGTAAACTGGAAA	-39	True	NA	NA	False	TTTAAA	-32	NA	85593897	85504775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159588.known	chr6	-	3111	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	39.8304362119475	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGTCTCATAGTCT	8	True	NA	-19	True	AATAAA	-27	NA	85593850	85505801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159589.known	chr6	-	3856	27	FSM	ENSG00000135317.14	ENST00000683458.1	3856	27	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_17	70.0203689722206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-39	True	NA	NA	False	NA	NA	NA	85593897	85504994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547115_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159590.known	chr6	-	3267	27	FSM	ENSG00000135317.14	ENST00000682738.1	3267	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	58.1479061882957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-39	True	NA	NA	False	TATAAA	-1	NA	85593897	85505527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159592.known	chr6	-	3348	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_22	54.4621116006348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	8153	False	NA	NA	False	AATAAA	-29	NA	85593913	85505495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159593.known	chr6	-	3773	26	FSM	ENSG00000135317.14	ENST00000682991.1	3773	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	57.0818920499312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-39	True	NA	NA	False	NA	NA	NA	85593897	85504994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159596.known	chr6	-	2584	15	FSM	ENSG00000135317.14	ENST00000682168.1	2584	15	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_14	26.144418376489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAGACTGTTTCAAAAAA	-39	True	NA	NA	False	NA	NA	NA	85593897	85541027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_159601.known	chr6	-	6427	12	FSM	ENSG00000135316.19	ENST00000678878.1	6427	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	296.748857280901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-25	True	NA	-27	True	AATAAA	-17	NA	85642978	85608334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_159602.known	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	386.788707348381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	6	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_159611.known	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_10	309.576161872971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	1155	False	NA	-1	True	AATAAA	-21	NA	85642922	85607778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_159615.known	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	299.907652453218	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-21	True	NA	54	True	AATAAA	-28	NA	85643867	85614205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_159616.known	chr6	-	2754	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_10	100.097152806661	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTGGTAAGTATTT	7	True	NA	NA	False	AATAAA	-20	NA	85642886	85613975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_159625.known	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	300.956417828394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	1066	False	NA	-16	True	AATAAA	-17	NA	85643011	85613384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_159628.nic	chr6	-	1789	10	ISM	ENSG00000135316.19	ENST00000369622.8	2754	11	-436	4871	-311	-4119	5prime_fragment	FALSE	canonical	3	883	junction_9	100.81458350315	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGAGGCAAGCAGCAAA	-13	True	NA	21	True	AAGAAA	-6	NA	85643322	85618846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_159631.known	chr6	-	2317	9	FSM	ENSG00000135316.19	ENST00000678816.1	2317	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	373.744377048003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	2	True	NA	54	True	AATAAA	-28	NA	85642951	85614205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_159632.nic	chr6	-	1283	9	ISM	ENSG00000135316.19	ENST00000678899.1	3310	10	35	5462	2	-4119	5prime_fragment	FALSE	canonical	3	216	junction_8	314.276848495081	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGAGGCAAGCAGCAAA	-23	True	NA	21	True	AAGAAA	-6	NA	85642976	85618846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_159647.known	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	1548.39767501763	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
transcript_159648.known	chr6	-	451	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1517.40823775278	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
transcript_159652.known	chr6	-	3657	5	FSM	ENSG00000203875.13	ENST00000655116.1	3657	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	1550.90562253156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCAGACACTGCAGATT	509	False	NA	NA	False	NA	NA	NA	85678748	85673790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677953_85678033_85678135_85678189_85678693
transcript_159653.known	chr6	-	553	5	FSM	ENSG00000203875.13	ENST00000667545.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	640.332921221453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678189_85678693
transcript_159654.known	chr6	-	600	5	FSM	ENSG00000203875.13	ENST00000664198.1	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	791.364802098248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTGTAATCAAATTA	509	False	NA	-14	True	ATTAAA	-16	NA	85678748	85677006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85678033_85678135_85678189_85678693
transcript_159656.known	chr6	-	279	4	FSM	ENSG00000203875.13	ENST00000660949.1	279	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	1518.52040559955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATGTTCCTTTTTGT	509	False	NA	-19	True	AATAAA	-12	NA	85678748	85677085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678697
transcript_159657.known	chr6	-	823	4	FSM	ENSG00000203875.13	ENST00000427501.6	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	1812.04788997299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85678033_85678135_85678189_85678697
transcript_159658.known	chr6	-	790	3	FSM	ENSG00000203875.13	ENST00000435947.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677186_85677419_85677493_85678135
transcript_159659.known	chr6	-	866	4	FSM	ENSG00000203875.13	ENST00000428833.6	866	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2014.57296274477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	509	False	NA	-18	True	AATAAA	-13	NA	85678748	85677084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677186_85677419_85677493_85677953_85678033_85678135
transcript_159660.known	chr6	-	1008	4	FSM	ENSG00000203875.13	ENST00000670327.1	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1835.85021175476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTTTGGATTATGT	-6	True	NA	13	True	AATAAA	-2	NA	85678736	85677095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85678033_85678135
transcript_159661.known	chr6	-	977	3	FSM	ENSG00000203875.13	ENST00000662245.1	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	1563.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677953
transcript_159662.known	chr6	-	438	5	FSM	ENSG00000203875.13	ENST00000433843.2	438	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	1696.18115188207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTACGGATCTGGCTTCT	509	False	NA	NA	False	NA	NA	NA	85678748	85677318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678697
transcript_159663.known	chr6	-	638	6	FSM	ENSG00000203875.13	ENST00000667622.1	638	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1553.47216260865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATGTTCCTTTTTG	509	False	NA	-20	True	AATAAA	-11	NA	85678748	85677086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678497
transcript_159668.known	chr6	+	1826	2	FSM	ENSG00000168830.8	ENST00000305344.7	1826	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTTGTAGAAGTAATA	-9	True	NA	5	True	AATAAA	-19	NA	86937527	87016679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_86937824_87015149
transcript_159670.known	chr6	+	737	6	FSM	ENSG00000111850.11	ENST00000369572.3	737	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.0591260281974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAGGAGAGCCAAAGCT	19	True	NA	NA	False	NA	NA	NA	87322619	87399599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87322633_87375461_87375711_87391779_87391836_87392724_87392843_87398242_87398378_87399433
transcript_159674.known	chr6	+	2405	3	FSM	ENSG00000111850.11	ENST00000229570.9	2405	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	9.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGATTCTGAACATT	-8	True	NA	10	True	AATAAA	-15	NA	87322592	87342322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87322633_87337008_87337167_87340115
transcript_159679.known	chr6	-	2279	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	0	True	NA	NA	False	AATAAA	-21	NA	87329278	87282979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87284940_87322865_87323044_87329137
transcript_159687.known	chr6	+	1854	8	FSM	ENSG00000164414.19	ENST00000369552.9	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.1024909872717	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	-10	True	NA	NA	False	AATAAA	-17	NA	87472973	87512336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
transcript_159699.nnic	chr6	-	2467	20	NIC	ENSG00000146282.19	novel	2570	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	257	junction_19	117.637642608345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-12	True	NA	-13	True	AATAAA	-14	NA	87589991	87513937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_159700.known	chr6	-	2242	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	0	0	0	multi-exon	TRUE	canonical	3	480	junction_19	80.3308946270297	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-8	True	NA	-13	True	AATAAA	-14	NA	87589987	87513937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_159710.nnic	chr6	-	1998	20	ISM	ENSG00000146282.19	ENST00000693431.1	2361	21	21	461	-1	4	5prime_fragment	FALSE	canonical	3	257	junction_19	117.637642608345	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-12	True	NA	-47	True	AATGAA	-41	NA	87589991	87514406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_159719.nnic	chr6	-	1942	19	FSM	ENSG00000146282.19	ENST00000693327.1	2388	19	-4	450	-1	4	multi-exon	FALSE	canonical	3	51	junction_14	187.682890226975	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-12	True	NA	-47	True	AATGAA	-41	NA	87589991	87514406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_159737.nnic	chr6	+	2597	21	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	207.619363258825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-20	True	NA	16	True	AATAAA	-23	NA	87590122	87667451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_159743.known	chr6	+	2501	20	FSM	ENSG00000135336.16	ENST00000257789.4	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_14	144.243599741833	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-8	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_159744.known	chr6	+	2498	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_14	132.734337803497	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-8	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_159750.nic	chr6	+	2134	19	ISM	ENSG00000135336.16	ENST00000392844.8	2498	20	-10	1558	-5	-1558	5prime_fragment	FALSE	canonical	3	361	junction_14	135.83865020269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGGTCTACACTAGAT	-18	True	NA	1	True	CATAAA	-17	NA	87590124	87665893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753
transcript_159754.nnic	chr6	+	2405	19	NIC	ENSG00000135336.16	novel	2501	20	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_8	201.343266863114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-26	True	NA	16	True	AATAAA	-23	NA	87590116	87667451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_159755.nnic	chr6	+	2394	19	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_8	193.471215200378	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-18	True	NA	16	True	AATAAA	-23	NA	87590124	87667451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_159757.known	chr6	+	2470	19	FSM	ENSG00000135336.16	ENST00000546266.5	2470	19	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	201.871215517025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGTTGCTTTAGCAA	NA	False	NA	18	True	AATAAA	-25	NA	87590066	87667453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_159764.nic	chr6	+	1121	10	ISM	ENSG00000135336.16	ENST00000681069.1	2035	15	-21	35955	-15	11902	5prime_fragment	FALSE	canonical	3	562	junction_9	128.538796564392	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTATCAAATAATCAAT	NA	False	NA	NA	False	AATAAA	-1	NA	87590114	87621433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353
transcript_159766.nic	chr6	+	713	4	ISM	ENSG00000135336.16	ENST00000681069.1	2035	15	-19	53521	-13	-5664	5prime_fragment	FALSE	canonical	3	707	junction_3	150.564124397399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAGATTTGGTTTTCAT	-26	True	NA	NA	False	AATAAA	-14	NA	87590116	87603867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383
transcript_159767.known	chr6	+	471	4	FSM	ENSG00000135336.16	ENST00000468486.2	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	438.877608856451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	-13	True	NA	21	True	AATAAA	-17	NA	87590129	87595437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87594526_87594614_87595171
transcript_159772.known	chr6	-	1898	5	FSM	ENSG00000135334.9	ENST00000257787.6	1898	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	18.9538914210249	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCCAGGAATCAGTG	24	True	NA	-12	True	AATAAA	-21	NA	87702233	87674859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
transcript_159777.known	chr6	-	4825	16	FSM	ENSG00000111880.16	ENST00000369485.9	4825	16	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_4	23.8523234367919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTCGTGAACTACCAAA	-13	True	NA	NA	False	AATAAA	-14	NA	88963618	88609896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_159782.known	chr6	-	2017	14	FSM	ENSG00000111880.16	ENST00000627296.1	2017	14	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	25.2977534844687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGAAT	44	False	NA	NA	False	NA	NA	NA	88963561	88677993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_159789.nnic	chr6	+	1715	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-109	-322	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	947	False	NA	20	True	TTTAAA	-31	NA	89081726	89084838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_89082166_89082545_89082736_89083752
transcript_159790.known	chr6	+	2092	2	FSM	ENSG00000146278.11	ENST00000336032.4	2092	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGTGGGAATGTTAAG	0	True	NA	NA	False	AAAAAG	-26	NA	89080750	89085160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89081435_89083752
transcript_159792.known	chr6	+	1345	2	FSM	ENSG00000146278.11	ENST00000354922.3	1345	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGATTTCAGTATGTGT	21	True	NA	NA	False	NA	NA	NA	89081835	89084197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89082736_89083752
transcript_159793.known	chr6	-	3589	5	FSM	ENSG00000154548.9	ENST00000452027.3	3589	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	65.3490627323759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGTGATCAGTTCTT	-28	True	NA	-9	True	AATAAA	-19	NA	89118071	89095958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89098948_89105118_89105261_89105426_89105531_89107153_89107259_89117822
transcript_15980.known	chr1	-	4639	10	FSM	ENSG00000158769.18	ENST00000368026.11	4639	10	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_3	109.914557163932	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCAGCTTATTACCC	-7	True	NA	-7	True	ATTAAA	-18	NA	161021152	160995210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_159800.known	chr6	+	4703	7	FSM	ENSG00000146281.6	ENST00000275072.5	4703	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	17.4300188053701	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTCTTGCTTTTTTA	-21	True	NA	26	True	AATAAA	-16	NA	89146054	89165565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89146610_89149264_89149414_89153042_89153186_89154747_89154903_89158324_89158461_89161782_89161891_89162108
transcript_159803.known	chr6	-	4164	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	27.1263107460981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTTTGACCAAAGGT	2	True	NA	-4	True	AATAAA	-20	NA	89352722	89326624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
transcript_159809.nic	chr6	-	2009	6	ISM	ENSG00000198833.7	ENST00000435041.3	4164	8	-453	7832	-453	-7832	5prime_fragment	FALSE	canonical	3	219	junction_5	27.4998181812171	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTCATAATCTCACCG	-1	True	NA	NA	False	AAAAAG	-18	NA	89353175	89334456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
transcript_159812.known	chr6	-	4923	7	FSM	ENSG00000025039.15	ENST00000369415.9	4923	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	16.6499916583229	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTACATCTCCACAT	-11	True	NA	19	True	GATAAA	-39	NA	89412273	89364615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411845
transcript_159818.known	chr6	+	2968	16	FSM	ENSG00000135299.17	ENST00000447838.6	2968	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_15	29.654004788561	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTAATTCTCCAACTGT	21	True	NA	18	True	AATAAA	-14	NA	89433212	89631497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629224_89630432
transcript_159822.known	chr6	+	5258	15	FSM	ENSG00000135299.17	ENST00000369408.9	5258	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	36.5117397949912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTTTAGCTTACATTT	-22	True	NA	34	True	ATTAAA	-18	NA	89433169	89633834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629239_89630432
transcript_15984.nnic	chr1	-	1871	10	Fusion	ENSG00000158769.18_ENSG00000215845.11	novel	4639	10	NA	NA	-23	445	intron_retention	FALSE	canonical	3	55	junction_9	419.933092848296	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGCTGGTGGCTTAGG	-45	True	NA	NA	False	AAAAAG	-13	NA	161039000	160997956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161038879
transcript_159846.known	chr6	+	568	5	FSM	ENSG00000135299.17	ENST00000520886.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	44.924241785477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGTGAACAAAACCAGAT	12	True	NA	NA	False	NA	NA	NA	89433203	89612370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89433376_89595915_89596015_89603028_89603128_89606006_89606106_89612271
transcript_159848.known	chr6	-	677	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGAGTTCAAGACCAG	-6	True	NA	NA	False	NA	NA	NA	89638749	89636912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89637354_89637724_89637883_89638671
transcript_159850.known	chr6	-	565	3	FSM	ENSG00000083099.11	ENST00000521961.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGGACACAATCATTAG	-8	True	NA	38	True	AAGAAA	-26	NA	89638483	89637026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89637354_89637724_89637883_89638403
transcript_159860.known	chr6	-	18485	102	FSM	ENSG00000112159.12	ENST00000369393.8	18485	102	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_96	128.029459101428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCATCCCACTCAC	-40	True	NA	-9	True	TATAAA	-24	NA	89819794	89642497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89644194_89645014_89645158_89646539_89646604_89648031_89648147_89648255_89648330_89650023_89650199_89650731_89650848_89652191_89652282_89652991_89653156_89654163_89654335_89655763_89655969_89656699_89656802_89658208_89658371_89658609_89658918_89661430_89661579_89662086_89662240_89662791_89662968_89664486_89664629_89668013_89668152_89670918_89671081_89672199_89672364_89672546_89672703_89673235_89673463_89674103_89674590_89675463_89675580_89676101_89676208_89677569_89677697_89678598_89678746_89680588_89680752_89683131_89683331_89683830_89683905_89684875_89684986_89685826_89685974_89686901_89687024_89687343_89687439_89688077_89688174_89688572_89688809_89689869_89690144_89690672_89690835_89692442_89693149_89694073_89694184_89695604_89695993_89696359_89696575_89698864_89699036_89699600_89699728_89700062_89700295_89700645_89700857_89701557_89701679_89701903_89702062_89706058_89706193_89707360_89707477_89708495_89708629_89710680_89710795_89712035_89712257_89712574_89712787_89713147_89713297_89714542_89714752_89715652_89715770_89716649_89716810_89718365_89718628_89718766_89719031_89719135_89719226_89722954_89723144_89723511_89723620_89725198_89725397_89727832_89727956_89728930_89729140_89730725_89730924_89732556_89732776_89738325_89738456_89740233_89740379_89743149_89743281_89743575_89743715_89745272_89745412_89745491_89745627_89747328_89747471_89749222_89749370_89749542_89749752_89750353_89750533_89751430_89751583_89753511_89753623_89754082_89754231_89756276_89756391_89758254_89758352_89758815_89758961_89761644_89761749_89762318_89762531_89771560_89771622_89772572_89772722_89774620_89774734_89776599_89776696_89780211_89780294_89781398_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_159862.nic	chr6	-	2597	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-81	137130	-10	-31419	5prime_fragment	FALSE	canonical	3	14	junction_4	8.44736791499921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGGCATCTCCTCATT	-50	True	NA	NA	False	NA	NA	NA	89819804	89780641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_159863.nic	chr6	-	2431	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-81	137296	-10	-31585	5prime_fragment	FALSE	canonical	3	14	junction_4	8.44736791499921	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCACGGTGGCAG	-50	True	NA	NA	False	AATACA	-5	NA	89819804	89780807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_159867.nic	chr6	-	2139	5	ISM	ENSG00000112159.12	ENST00000439638.1	3654	24	-86	43452	-10	-43452	5prime_fragment	FALSE	canonical	3	33	junction_3	3.11247489949718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATGTAATATACATAT	-50	True	NA	NA	False	AGTAAA	-13	NA	89819804	89792674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_159879.known	chr6	+	1153	7	FSM	ENSG00000118412.13	ENST00000552401.5	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	37.1816113451559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	1	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89829935_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_159885.known	chr6	+	1280	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	27.9702222610642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	7	True	NA	NA	False	TATAAA	-24	NA	89829899	89862793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_159896.known	chr6	-	4932	17	FSM	ENSG00000135341.18	ENST00000369329.8	4932	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	123.824724913888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTACATAAAAGTGGTGA	-12	True	NA	-35	True	AATAAA	-21	NA	90587072	90513578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_159900.known	chr6	-	4830	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	32.7342158740497	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	15	True	NA	-29	True	AATAAA	-27	NA	90587045	90513572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_159909.known	chr6	-	4558	15	FSM	ENSG00000135341.18	ENST00000369327.7	4558	15	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	107.048839702412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	342	False	NA	-29	True	AATAAA	-27	NA	90586889	90513572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90516682_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_159917.known	chr6	-	6620	17	FSM	ENSG00000135333.15	ENST00000680224.1	6620	17	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	8.63495801958527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGACAATGTAAAGAAAATC	-1	True	NA	NA	False	AATAAA	-10	NA	93419588	93240037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259468_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
transcript_159918.known	chr6	-	6621	17	FSM	ENSG00000135333.15	ENST00000369303.9	6621	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	6.92707550124871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCCAATCATTGGT	-4	True	NA	NA	False	AATAAA	-28	NA	93419559	93240019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259480_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
transcript_159921.known	chr6	-	2268	1	FSM	ENSG00000261366.1	ENST00000564541.1	2268	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTGAGATAATCATTGT	-19	True	NA	-11	True	ATTAAA	-14	NA	95577450	95575182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_95575200_95577400
transcript_159922.known	chr6	+	4578	5	FSM	ENSG00000172469.17	ENST00000358812.9	4578	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	19.6643713349804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATATTAAAGTCTAT	4	True	NA	14	True	AATAAA	-23	NA	95577534	95609452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_95577639_95586401_95586984_95596736_95596847_95604826_95604904_95605747
transcript_159925.known	chr6	+	1845	3	FSM	ENSG00000172469.17	ENST00000683172.1	1845	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAATTGAGAAAACA	22	True	NA	NA	False	ATTAAA	-4	NA	95577552	95597913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_95577639_95586401_95586984_95596736
transcript_159926.known	chr6	+	4226	19	FSM	ENSG00000014123.10	ENST00000369278.5	4226	19	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_15	10.0623058987491	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTACTTTGAAGCT	-23	True	NA	72	True	AATAAA	-19	NA	96521805	96555276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893_96543017_96548163_96548282_96549411_96549579_96549668_96549800_96551432_96551514_96551837_96551924_96552481_96552663_96553284
transcript_159933.known	chr6	-	5967	2	FSM	ENSG00000112218.9	ENST00000229955.4	5967	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGAGTTTTTTTTAA	4	True	NA	-1	True	AATAAA	-18	NA	96837477	96794124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_96799882_96837267
transcript_159936.known	chr6	-	2407	3	FSM	ENSG00000123545.6	ENST00000316149.8	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_1	16	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAGTCCTATACTGCG	-36	True	NA	-3	True	AATAAA	-19	NA	96897891	96889314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_96891392_96896743_96896848_96897665
transcript_159938.nnic	chr6	-	1545	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-39	-2150	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	22.261077142752	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAGGCATTGAATTCTG	NA	False	NA	NA	False	AAAAAG	-10	NA	97283256	97261812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_159946.known	chr6	-	8058	10	FSM	ENSG00000112234.9	ENST00000369244.7	8058	10	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_9	11.5833000265975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	10	True	NA	-11	True	AATAAA	-22	NA	98947946	98868534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98934761_98934880_98947805
transcript_159948.known	chr6	-	2810	9	FSM	ENSG00000112234.9	ENST00000229971.2	2810	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	12.3332629502496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTAGCGACACAGGAGG	NA	False	NA	NA	False	NA	NA	NA	98948006	98873724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
transcript_159955.nnic	chr6	-	2264	7	NNC	ENSG00000146267.12	novel	11528	6	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.4826800868477	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	9	True	NA	-50	True	AATAAA	-14	NA	99349990	99280666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99349106_99349415_99349495
transcript_159964.known	chr6	-	1325	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	28.5292247820838	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTGATCTAGGAGTGTA	-7	True	NA	-7	True	AATAAA	-17	NA	99394195	99369400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
transcript_159978.known	chr6	-	5073	12	FSM	ENSG00000132424.17	ENST00000481229.2	5073	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	208.493652914867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGTGTGGAATCTCG	2	True	NA	-19	True	TATAAA	-3	NA	99425292	99398068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412735_99414571_99414691_99416348_99416429_99425214
transcript_159983.known	chr6	-	3142	11	FSM	ENSG00000132424.17	ENST00000438806.5	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_10	212.55985039513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	NA	False	NA	-12	True	AATAAA	-25	NA	99425331	99399963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_159984.known	chr6	-	2422	11	FSM	ENSG00000132424.17	ENST00000478777.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_2	87.9570349659423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAACAAGG	-14	True	NA	NA	False	AAAAAG	-6	NA	99425308	99401460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_159995.nic	chr6	-	3562	10	NIC	ENSG00000132424.17	novel	2422	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	582	junction_4	78.4570339283834	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAACAAGGA	NA	False	NA	NA	False	AAAAAG	-7	NA	99425329	99401459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_99401631_99402539_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_16.known	ERCC-00044	+	1149	1	FSM	ERCC-00044A	DQ459424	1149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	0	1149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00044_+_0_1100
transcript_160005.nic	chr6	-	1018	7	ISM	ENSG00000132424.17	ENST00000478777.5	2422	11	-21	6692	0	0	5prime_fragment	FALSE	canonical	3	582	junction_1	95.2814544156183	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAGGCCAC	NA	False	NA	6	True	AAGAAA	-43	NA	99425329	99408152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_160008.nic	chr6	-	966	7	ISM	ENSG00000132424.17	ENST00000478777.5	2422	11	-21	6744	0	-52	5prime_fragment	FALSE	canonical	3	582	junction_1	95.2814544156183	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAGAAATTGGAGAAAG	NA	False	NA	-46	True	NA	NA	NA	99425329	99408204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_160009.nic	chr6	-	938	6	ISM	ENSG00000132424.17	ENST00000438806.5	3142	11	2	8189	0	0	5prime_fragment	FALSE	canonical	3	84	junction_5	277.699405832998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAGGCCAC	NA	False	NA	6	True	AAGAAA	-43	NA	99425329	99408152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_160012.known	chr6	-	1027	5	FSM	ENSG00000132424.17	ENST00000498075.1	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	322.481782431194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGGTGGGAGGATTGC	24	True	NA	NA	False	NA	NA	NA	99425270	99411735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99412319_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_160014.nic	chr6	-	1263	4	ISM	ENSG00000132424.17	ENST00000478777.5	2422	11	-21	10330	0	0	5prime_fragment	FALSE	canonical	3	644	junction_2	100.087739286865	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAACTTAGTCAGGCA	NA	False	NA	NA	False	NA	NA	NA	99425329	99411790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99412740_99414571_99414691_99416348_99416429_99425214
transcript_160016.known	chr6	-	2850	3	FSM	ENSG00000132424.17	ENST00000466057.1	2850	3	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	89	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAACTTAGTCAGGCA	36	False	NA	NA	False	NA	NA	NA	99425258	99411790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99412740_99414571_99416429_99425214
transcript_160017.known	chr6	+	2588	2	FSM	ENSG00000228506.3	ENST00000418945.3	2600	2	9	3	9	-3	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGATGGTATTTTATT	11	True	NA	NA	False	AATAAA	-19	NA	99424921	99432323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_99425899_99430712
transcript_160018.known	chr6	-	2862	12	FSM	ENSG00000132424.17	ENST00000681611.1	2862	12	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	218.385170386242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-21	True	NA	-44	True	NA	NA	NA	99425315	99398988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_16002.known	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_3	212.675548403875	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-9	True	NA	-15	True	AATAAA	-16	NA	161038964	161037630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
transcript_160020.known	chr6	-	5878	18	FSM	ENSG00000123552.18	ENST00000500704.7	5878	18	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	39.4758916398508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGTGTATTAACAAAAAT	5	True	NA	-5	True	AATAAA	-14	NA	99515423	99432324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_160024.known	chr6	-	2186	13	FSM	ENSG00000112237.13	ENST00000520371.5	2186	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	488.304947980483	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGCACAATTTAAG	98	False	NA	-45	True	AATAAA	-16	NA	99568713	99542501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99544178_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_160026.known	chr6	-	2153	12	FSM	ENSG00000112237.13	ENST00000520429.6	2153	12	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_7	104.526480491629	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	4	True	NA	-35	True	AATAAA	-20	NA	99568660	99542386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_160027.known	chr6	-	1035	12	FSM	ENSG00000112237.13	ENST00000523799.5	1035	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	414.062857048029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATATTGGAAAGTGATT	NA	False	NA	NA	False	AATGAA	-22	NA	99568825	99543447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568717
transcript_16003.known	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	579.921259022867	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	5	True	NA	-15	True	AATAAA	-16	NA	161038950	161037630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
transcript_160030.known	chr6	-	1426	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	380.711838707744	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTCTTCTGGAT	2	True	NA	NA	False	AATAAA	-14	NA	99568662	99543779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_160031.known	chr6	-	958	11	FSM	ENSG00000112237.13	ENST00000523985.5	958	11	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_10	427.71117591197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGAATAGCTTGT	4	True	NA	NA	False	AATAAA	-40	NA	99568660	99543474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99568495
transcript_160037.known	chr6	-	1444	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	25.0199920063936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	NA	False	NA	-5	True	AATAAA	-21	NA	99515489	99482261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_160039.known	chr6	-	1617	8	FSM	ENSG00000123552.18	ENST00000472914.6	1617	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	47.5136929780054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGAAAAGCTGAGAATCA	52	False	NA	NA	False	ATTAAA	-16	NA	99515376	99482513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99514853
transcript_16004.known	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	500	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-22	True	NA	-15	True	AATAAA	-16	NA	161038977	161037630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161037827_161037912_161038076_161038879
transcript_160049.known	chr6	-	1704	5	FSM	ENSG00000112237.13	ENST00000482541.2	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_1	63.7828346814407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAATAAATAGTATAA	5	True	NA	NA	False	CATAAA	-13	NA	99568628	99557239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_160050.known	chr6	+	1873	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	4.02768199119819	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAAAT	-5	True	NA	NA	False	NA	NA	NA	99521048	99533185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
transcript_160056.known	chr6	-	8111	42	FSM	ENSG00000112249.14	ENST00000369162.7	8111	42	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_28	52.2208051696252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGGGGAACCA	26	True	NA	NA	False	AATAAA	-18	NA	100881329	100508193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_100509534_100509931_100510108_100512708_100512919_100516179_100516328_100517990_100518143_100540162_100540388_100589633_100589769_100589947_100590060_100601809_100601936_100605567_100605701_100606739_100606861_100606950_100607089_100625191_100625335_100627589_100627711_100627841_100627988_100629014_100629182_100631127_100631214_100638600_100638822_100642580_100642750_100644030_100644130_100646614_100646770_100647225_100647452_100650537_100650715_100651559_100651647_100652724_100652890_100655698_100655819_100661805_100662031_100662344_100662537_100679617_100679753_100715461_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_160058.known	chr6	-	852	4	FSM	ENSG00000112249.14	ENST00000324723.10	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	132.114428516427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTTGACGAACTGCCA	7	True	NA	NA	False	NA	NA	NA	100881348	100848419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_100848708_100864063_100864215_100867907_100868033_100881060
transcript_160059.known	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	123.828734773297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-14	True	NA	-11	True	AATAAA	-20	NA	100881311	100856302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
transcript_160061.nic	chr6	-	520	3	ISM	ENSG00000112249.14	ENST00000369143.2	3433	4	-72	7846	-11	-7846	5prime_fragment	FALSE	canonical	3	279	junction_2	19.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAATGAAAAACTGGA	-28	True	NA	NA	False	AATAAA	-2	NA	100881383	100864148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_100864215_100867907_100868039_100881060
transcript_160062.known	chr6	+	1517	1	FSM	ENSG00000260000.2	ENST00000565695.2	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACTTTATTTTTACTT	-10	True	NA	NA	False	AATAAA	-16	NA	100881470	100882987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_100881500_100883000
transcript_160066.known	chr6	-	4575	24	FSM	ENSG00000085382.12	ENST00000262903.9	4575	24	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_18	21.1335657011271	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	-39	True	NA	-1	True	AATAAA	-16	NA	104859919	104728093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777111_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
transcript_16007.known	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	89	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	18	True	NA	-15	True	AATAAA	-16	NA	161038937	161037630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161038076_161038550_161038674_161038879
transcript_160080.known	chr6	+	2635	5	FSM	ENSG00000187772.8	ENST00000637759.1	2635	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	136.277290844807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACGAAAATGCCTCAG	142	False	NA	96	True	NA	NA	NA	104940865	105080479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_104941013_104950460_104950510_104958098_104958287_105026297_105026483_105078413
transcript_160082.nic	chr6	+	895	4	ISM	ENSG00000187772.8	ENST00000637759.1	2635	5	-340	54011	-340	-52134	5prime_fragment	FALSE	canonical	3	147	junction_1	105.597769336709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGGGAGATAGGTAATC	3482	False	NA	NA	False	AAGAAA	-2	NA	104940525	105026468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_104941013_104950460_104950510_104958098_104958287_105026297
transcript_160083.known	chr6	+	5446	4	FSM	ENSG00000187772.8	ENST00000345080.5	5446	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	163.905121606644	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGGAGATTTT	0	True	NA	13	True	AATAAA	-21	NA	104957106	105083332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_104957261_104958098_104958287_105026297_105026483_105078413
transcript_160087.known	chr6	-	1879	4	FSM	ENSG00000132429.10	ENST00000254765.4	1879	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	20.9814733091416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTTCCTGGAAAACAAAG	-48	True	NA	NA	False	AATAAA	-18	NA	105180014	105157899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_105158752_105159710_105159820_105161424_105162161_105179832
transcript_160088.known	chr6	-	1029	4	FSM	ENSG00000132429.10	ENST00000474760.1	1029	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCGAGATGCCATTGC	-29	True	NA	-80	True	TATAAA	-8	NA	105179995	105158359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_105158752_105159710_105159820_105161795_105162161_105179832
transcript_16009.known	chr1	-	813	2	FSM	ENSG00000215845.11	ENST00000486084.1	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGCTGGGAGGTGAT	39	True	NA	NA	False	NA	NA	NA	161038916	161037897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161038674_161038879
transcript_160095.known	chr6	-	7250	15	FSM	ENSG00000085377.15	ENST00000652536.2	7250	15	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	27.0962946484103	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTTTCTGGATGAGTG	3	True	NA	NA	False	AATAAA	-16	NA	105403082	105273217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_105278439_105281745_105281903_105282450_105282583_105285485_105285581_105288757_105288895_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
transcript_160100.nic	chr6	-	2416	11	NIC	ENSG00000085377.15	novel	961	2	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	91.139673029916	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCTGCTTATTTTG	70	False	NA	0	True	AATAAA	-28	NA	105403133	105322254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_105323112_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
transcript_160105.known	chr6	-	3092	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	129.233849107353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	10	True	NA	NA	False	AATAAA	-1	NA	106325417	106184475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
transcript_160106.known	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	52.5869542291816	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	20	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_16011.known	chr1	-	1807	11	FSM	ENSG00000158773.14	ENST00000368021.7	1807	11	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	3.78021163428716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-2	True	NA	NA	False	GATAAA	-15	NA	161045977	161039250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_160111.known	chr6	-	3035	7	FSM	ENSG00000057663.16	ENST00000635758.2	3035	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	111.613917889601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	42	True	NA	NA	False	AATAAA	-1	NA	106325738	106184475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106316100_106316267_106325525
transcript_160117.known	chr6	-	2893	9	FSM	ENSG00000130347.13	ENST00000369063.8	2893	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	16.4544826719043	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATCTGAT	-11	True	NA	NA	False	NA	NA	NA	106629498	106570770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106628747
transcript_16012.known	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	4.10365690573664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	13	True	NA	NA	False	NA	NA	NA	161045962	161039919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_160122.known	chr6	+	4106	11	FSM	ENSG00000130348.11	ENST00000369046.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	22.6294056484036	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGAACAGAGTGTTTT	3	True	NA	11	True	ATTAAA	-24	NA	106629577	106668417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466_106652583_106654729_106654923_106655614_106655733_106662979_106663186_106665781
transcript_160128.known	chr6	+	2158	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	24.0393196428037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6	True	NA	NA	False	NA	NA	NA	106629613	106653823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
transcript_160135.known	chr6	-	2513	3	FSM	ENSG00000272398.6	ENST00000619133.4	2513	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	2724	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-6	True	NA	-21	True	AATAAA	-22	NA	106975465	106969830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106974577_106974755_106975133
transcript_160136.known	chr6	-	802	3	FSM	ENSG00000272398.6	ENST00000610952.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	2745.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATGGATGCCAATATT	-1	True	NA	NA	False	NA	NA	NA	106975627	106971468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106974577_106974755_106975368
transcript_16014.known	chr1	+	1038	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	21.569654610123	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	6	True	NA	-29	True	TATAAA	-16	NA	161098360	161100298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_160141.known	chr6	-	1026	2	FSM	ENSG00000272398.6	ENST00000615659.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAATCTACCCCCAGAT	2	True	NA	NA	False	NA	NA	NA	106975327	106971002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106975133
transcript_160144.known	chr6	-	2156	2	FSM	ENSG00000272398.6	ENST00000606017.2	2156	2	0	0	0	0	multi-exon	FALSE	canonical	3	5731	junction_1	0	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	1	True	NA	-21	True	AATAAA	-22	NA	106974729	106969830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106974577
transcript_160145.known	chr6	-	566	2	FSM	ENSG00000272398.6	ENST00000619869.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACACTTAATACTACCT	0	True	NA	-74	True	NA	NA	NA	106975459	106971359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106975368
transcript_160148.known	chr6	+	1146	5	FSM	ENSG00000130349.10	ENST00000625458.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	95.5955019862336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATCTGCCGAGCCAT	237	False	NA	8	True	AATAAA	-15	NA	107028568	107051335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_107028798_107030024_107030108_107039748_107040231_107044259_107044333_107051056
transcript_16015.nic	chr1	+	1144	5	NIC	ENSG00000162755.14	novel	1347	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	31.4434015335491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	25	True	NA	19	True	ATTAAA	-19	NA	161098379	161100346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161098482_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_160153.known	chr6	+	1158	4	FSM	ENSG00000130349.10	ENST00000311381.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	31.689465477067	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTATTTAAAATGTT	-24	True	NA	NA	False	AATAAA	-18	NA	107028198	107051586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_107028272_107039748_107040231_107044259_107044333_107051056
transcript_160157.known	chr6	+	1420	4	FSM	ENSG00000130349.10	ENST00000405204.6	1420	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	88.1450824241237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	-10	True	NA	9	True	AATAAA	-16	NA	107028212	107051336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_107028798_107039748_107040231_107044259_107044333_107051056
transcript_160160.known	chr6	-	6446	4	FSM	ENSG00000178409.14	ENST00000369042.6	6446	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	18.624953392932	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCTCGTAACATGTTA	-6	True	NA	-43	True	TATAAA	-21	NA	107115515	107065181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107070951_107098550_107098754_107099248_107099297_107115089
transcript_160163.known	chr6	-	3536	8	FSM	ENSG00000164494.12	ENST00000369037.9	3536	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	10.5926428068095	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGGTTTGTTTTA	0	True	NA	-5	True	ATTAAA	-17	NA	107459564	107152561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
transcript_160166.known	chr6	-	1236	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	20.9814733091416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	0	True	NA	-2	True	AATAAA	-15	NA	107459564	107264185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
transcript_160169.known	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_10	44.163870980701	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-17	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_16017.known	chr1	+	921	4	FSM	ENSG00000162755.14	ENST00000469647.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32.273139846559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATTTGTCTCTGAAATT	8	True	NA	16	True	ATTAAA	-16	NA	161098362	161100343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161098405_161098665_161099063_161099597_161099797_161100060
transcript_160175.nic	chr6	-	1924	16	ISM	ENSG00000025796.14	ENST00000369002.9	6430	21	-120	25795	-120	29	5prime_fragment	FALSE	canonical	3	420	junction_5	34.6072567855677	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACACCTGTGCTATTACC	5952	False	NA	NA	False	AAAAAG	-19	NA	107958328	107893550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_160179.known	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	28.2658804922118	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-6	True	NA	46	True	ATTAAA	-20	NA	108074741	108041408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
transcript_16018.known	chr1	+	1333	4	FSM	ENSG00000162755.14	ENST00000392192.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	39.9694327649962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	-11	True	NA	19	True	ATTAAA	-19	NA	161098393	161100346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161099063_161099345_161099506_161099578_161099797_161100060
transcript_160184.known	chr6	-	1535	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_1	81.8711725144381	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTCTCCTATTTTTC	-21	True	NA	-13	True	ATTAAA	-20	NA	108261040	108211221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
transcript_160185.known	chr6	-	890	4	FSM	ENSG00000112335.15	ENST00000349379.5	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	400.841614606069	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGTTGACAAGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	108261244	108212004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260825
transcript_160188.known	chr6	+	5048	13	FSM	ENSG00000135537.17	ENST00000368977.9	5048	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	7.91447338038918	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGCTGGTAGGAAAG	-5	True	NA	NA	False	NA	NA	NA	108295053	108526001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108510211_108510353_108519696_108519811_108522296
transcript_160189.known	chr6	+	1741	11	FSM	ENSG00000135537.17	ENST00000421954.5	1741	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.96883492991147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGCAGAGCTACAAACTC	142	False	NA	NA	False	NA	NA	NA	108295200	108523117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_108295219_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108510211_108510353_108519696_108519811_108522296
transcript_160192.known	chr6	+	7308	4	FSM	ENSG00000118689.15	ENST00000343882.10	7308	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	24.9977776790036	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGAAGTCTCTTTGTT	14	False	NA	23	True	AATAAA	-23	NA	108559834	108684774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_108560016_108561085_108561830_108663454_108664890_108679826
transcript_160196.nic	chr6	+	3327	3	ISM	ENSG00000118689.15	ENST00000343882.10	7308	4	-18	18936	-18	-14913	5prime_fragment	FALSE	canonical	3	17	junction_1	23	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGAAAACACAGGTG	-4	True	NA	NA	False	AAAAAG	-9	NA	108559816	108665838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_108560016_108561085_108561830_108663454
transcript_160197.known	chr6	+	7296	3	FSM	ENSG00000118689.15	ENST00000406360.2	7296	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	6	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGAAGTCTCTTTGTT	-22	True	NA	23	True	AATAAA	-23	NA	108560916	108684774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_108561830_108663454_108664890_108679826
transcript_16020.known	chr1	+	776	2	FSM	ENSG00000162755.14	ENST00000471613.1	776	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGGTCATCAGCTATT	27	True	NA	NA	False	NA	NA	NA	161098381	161099418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161098405_161098665
transcript_160201.nic	chr6	+	3400	2	ISM	ENSG00000118689.15	ENST00000406360.2	7296	3	-103	18936	-103	-14913	5prime_fragment	FALSE	canonical	3	63	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGAAAACACAGGTG	993	False	NA	NA	False	AAAAAG	-9	NA	108560813	108665838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_108561830_108663454
transcript_160213.known	chr6	-	2676	10	FSM	ENSG00000080546.14	ENST00000356644.7	2676	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	9.6148034012373	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTGCTGTCTCAATC	-26	True	NA	-5	True	AATAAA	-18	NA	109009555	108986441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109009358
transcript_160214.known	chr6	-	3509	10	FSM	ENSG00000080546.14	ENST00000436639.7	5664	10	27	2128	27	5	multi-exon	FALSE	canonical	3	19	junction_9	28.6296056729333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCTCAATCTCTTA	30	True	NA	0	True	AATAAA	-23	NA	109094819	108986436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109093794
transcript_16022.known	chr1	-	598	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_1	137.463530517087	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	4	True	NA	-6	True	ATTAAA	-15	NA	161118037	161100560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
transcript_160223.known	chr6	+	12903	11	FSM	ENSG00000183137.15	ENST00000517392.6	12903	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	25.4654668129214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTGTATATTTTGTT	5	True	NA	NA	False	CATAAA	-18	NA	109095506	109174418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
transcript_160229.known	chr6	+	908	7	FSM	ENSG00000183137.15	ENST00000519095.5	908	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	32.316146634977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATATAAAATAAAAGACA	10	True	NA	NA	False	AAAAAG	-7	NA	109095511	109155974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_160233.known	chr6	-	3020	6	FSM	ENSG00000135535.17	ENST00000310786.10	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_2	51.1570132044473	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	2	True	NA	-1	True	AATAAA	-22	NA	109382467	109366513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_160235.known	chr6	-	2936	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	342.741155976343	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	0	True	NA	-5	True	AATAAA	-18	NA	109382444	109366517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_160238.known	chr6	+	1684	10	FSM	ENSG00000135587.9	ENST00000258052.8	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	6.97791931915893	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	-2	True	NA	5	True	AATAAA	-14	NA	109440723	109443919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_16024.known	chr1	-	408	2	FSM	ENSG00000143256.5	ENST00000468311.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGCCTGAAGTTTTCT	-14	True	NA	-1	True	ATTAAA	-20	NA	161118055	161100555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161100860_161117951
transcript_160242.nic	chr6	+	1849	9	NIC	ENSG00000135587.9	novel	1684	10	NA	NA	-39	0	intron_retention	FALSE	canonical	3	68	junction_3	7.38135319572231	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	0	True	NA	5	True	AATAAA	-14	NA	109440684	109443919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442885_109442976_109443082_109443266_109443421_109443516
transcript_160244.nic	chr6	+	2029	9	NIC	ENSG00000135587.9	novel	1684	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	73	junction_1	5.41842920042331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	-2	True	NA	5	True	AATAAA	-14	NA	109440723	109443919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_109441172_109441356_109441454_109441551_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_16025.known	chr1	+	1485	7	FSM	ENSG00000158793.14	ENST00000368009.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	27.4089401473315	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTCCCAGCCCCATT	-5	True	NA	5	True	AATAAA	-14	NA	161118104	161121194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_160258.nic	chr6	-	3510	25	NIC	ENSG00000135596.18	novel	3430	25	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_24	51.5932105513894	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	0	True	NA	-4	True	ATTAAA	-17	NA	109455744	109444061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455610
transcript_160259.known	chr6	-	3430	25	FSM	ENSG00000135596.18	ENST00000358807.8	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_24	47.479801992239	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-28	True	NA	-4	True	ATTAAA	-17	NA	109455772	109444061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_16026.known	chr1	+	2081	7	FSM	ENSG00000158793.14	ENST00000368008.5	2081	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	75.4860178370067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTTGTAATTCTATGC	8	True	NA	NA	False	AATAAA	-20	NA	161118117	161125445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161124140
transcript_160280.known	chr6	-	3142	24	FSM	ENSG00000135596.18	ENST00000358577.7	3142	24	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	59.137755301325	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	2	True	NA	-4	True	ATTAAA	-17	NA	109455742	109444061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_1603.known	chr1	-	727	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_3	145.684590811794	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-6	True	NA	-14	True	ATTAAA	-40	NA	2194772	2189547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
transcript_160308.known	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	13.1328680120613	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	13	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
transcript_160312.known	chr6	-	887	6	FSM	ENSG00000135596.18	ENST00000431946.1	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	57.405923039352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGGACGCACCGTGGA	22	True	NA	NA	False	NA	NA	NA	109455722	109452345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455610
transcript_160323.known	chr6	-	2566	12	FSM	ENSG00000155085.16	ENST00000285397.9	2566	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.99276532375755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTACTATAAACATTCTTG	NA	False	NA	NA	False	AATAAA	-32	NA	109691217	109631692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109633104_109633183_109633324_109641517_109641617_109644613_109644689_109656755_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_160325.known	chr6	+	3025	23	FSM	ENSG00000112367.12	ENST00000230124.8	3025	23	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	21.2298032363596	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	5	True	NA	6	True	AATAAA	-14	NA	109691295	109825426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_160326.known	chr6	+	2915	22	FSM	ENSG00000112367.12	ENST00000676442.1	2915	22	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_6	50.1363220993602	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTAGATAATTTGCTGT	-26	True	NA	-6	True	AATAAA	-2	NA	109691264	109825414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_160330.known	chr6	+	2725	20	FSM	ENSG00000112367.12	ENST00000675714.1	2725	20	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	21.9046030402067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATGGTGAATTTCTG	-3	True	NA	NA	False	AATAAA	-20	NA	109691287	109791772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375
transcript_160334.known	chr6	+	2187	15	FSM	ENSG00000112367.12	ENST00000675681.1	2187	15	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	22.0546630730398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGAGTCATTTTTTTA	21	True	NA	NA	False	GATAAA	-11	NA	109691311	109767208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
transcript_160338.known	chr6	+	1387	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	22.2542130842679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	5	True	NA	4	True	AATAAA	-20	NA	109691295	109743480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
transcript_160339.known	chr6	+	1158	7	FSM	ENSG00000112367.12	ENST00000368941.2	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	82.2896307765039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	4	True	NA	4	True	AATAAA	-20	NA	109691294	109743480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109
transcript_16034.known	chr1	-	869	7	FSM	ENSG00000158796.17	ENST00000473679.6	869	7	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_4	151.575796953941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAAGCTGTGGGCCAT	-10	True	NA	NA	False	NA	NA	NA	161132450	161122262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124211_161124339_161124527_161130814_161130848_161132390
transcript_160340.known	chr6	+	2786	21	FSM	ENSG00000112367.12	ENST00000674641.1	2786	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.8615881335398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGACTAGATAATTTG	5	True	NA	-10	True	NA	NA	NA	109691295	109825410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_160341.known	chr6	+	1783	2	FSM	ENSG00000146360.9	ENST00000275169.5	1783	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTATGTCACTGACT	1	True	NA	NA	False	AATAAA	-19	NA	109978310	109980720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109978468_109979094
transcript_160342.known	chr6	-	2815	11	FSM	ENSG00000112290.13	ENST00000392586.5	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	159.651777315506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	13	True	NA	-4	True	AATAAA	-19	NA	110180001	110099818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179840
transcript_160345.known	chr6	-	3075	10	FSM	ENSG00000112290.13	ENST00000359451.6	3075	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	129.680043107052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	10	True	NA	-4	True	AATAAA	-19	NA	110180004	110099818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110179438
transcript_160346.known	chr6	-	3122	10	FSM	ENSG00000112290.13	ENST00000392588.5	3122	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	150.676253382321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	10	True	NA	-4	True	AATAAA	-19	NA	110180004	110099818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110178597_110178743_110179438
transcript_160350.known	chr6	-	2675	9	FSM	ENSG00000112290.13	ENST00000392587.6	2675	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_8	63.0634601017102	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	312	False	NA	-4	True	AATAAA	-19	NA	110179702	110099818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110179438
transcript_160353.known	chr6	+	3859	15	FSM	ENSG00000168438.15	ENST00000307731.2	3859	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	13.431610598335	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCTTGTTCATCTTT	-1	True	NA	29	True	AATAAA	-29	NA	110180426	110232232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_160355.known	chr6	+	3933	16	FSM	ENSG00000168438.15	ENST00000368932.5	3933	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.0407570136008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAATGTTCATCTTG	0	True	NA	20	True	AATAAA	-20	NA	110180140	110232223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110180181_110180383_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_160357.nic	chr6	+	726	6	ISM	ENSG00000168438.15	ENST00000606893.5	3372	15	256	19579	-24	1438	internal_fragment	FALSE	canonical	3	122	junction_2	15.7175061635108	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAACAGGAAGAAGAGAA	-4	True	NA	18	True	AAAAAG	-36	NA	110180396	110210754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706
transcript_160359.nic	chr6	+	567	5	ISM	ENSG00000168438.15	ENST00000606893.5	3372	15	256	21221	-24	0	internal_fragment	FALSE	canonical	3	122	junction_2	16.3764312351623	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAGAAAAGAGGAAAAA	-4	True	NA	8	True	NA	NA	NA	110180396	110209112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083
transcript_160363.known	chr6	+	1977	15	FSM	ENSG00000168438.15	ENST00000368930.5	1977	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	41.2301281757376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATTTTAAGAATTGT	-7	True	NA	NA	False	AAAACA	-29	NA	110180420	110254275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110253884
transcript_160364.known	chr6	-	1083	2	FSM	ENSG00000155111.15	ENST00000468997.5	1083	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	7	True	NA	NA	False	AATAAA	-19	NA	110815125	110813158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110814125_110815008
transcript_160366.known	chr6	+	6589	9	FSM	ENSG00000123505.19	ENST00000672937.2	6589	9	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_5	48.6383336474431	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTATGGTGGTATTG	1	True	NA	4	True	AATAAA	-14	NA	110874784	110898879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110887504_110887592_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_160372.known	chr6	+	1605	8	FSM	ENSG00000123505.19	ENST00000368877.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	268.664649475049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCGTCCTCATTAGGT	1	True	NA	NA	False	NA	NA	NA	110874784	110893982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_160376.known	chr6	+	3121	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	279.246414480115	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	453	False	NA	28	True	AATAAA	-29	NA	110874769	110895713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_160377.known	chr6	+	3059	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	338.764206344177	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	0	True	NA	23	True	AATAAA	-24	NA	110874783	110895708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_160380.known	chr6	+	788	6	FSM	ENSG00000155115.7	ENST00000329970.8	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	2181	junction_1	55.4595347979047	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTCTTTTAATATT	6	True	NA	26	True	CATAAA	-16	NA	110958705	110967872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110958827_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_160385.known	chr6	+	3671	10	FSM	ENSG00000197498.13	ENST00000441448.7	3671	10	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_7	40.8900966005218	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	-26	True	NA	21	True	AATAAA	-17	NA	110982037	111028263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_160388.nic	chr6	+	829	9	ISM	ENSG00000197498.13	ENST00000441448.7	3671	10	-19	3936	4	0	5prime_fragment	FALSE	canonical	3	873	junction_7	41.3763217311544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAACTTAGAGCTTGG	0	True	NA	12	True	TATAAA	-31	NA	110982018	111024327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182
transcript_160390.known	chr6	+	3621	9	FSM	ENSG00000197498.13	ENST00000607388.1	3621	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	307.479267593768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	-14	True	NA	21	True	AATAAA	-17	NA	110982049	111028263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110982130_110985005_110985139_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_160393.known	chr6	+	10757	6	FSM	ENSG00000112394.18	ENST00000368851.10	10757	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	19.5489130132598	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGGCTTTGTGGTTATG	-1	True	NA	8	True	AATAAA	-19	NA	111087502	111231194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111088096_111172694_111172840_111177211_111177666_111206591_111206736_111218813_111219043_111222002
transcript_160395.nic	chr6	+	1552	4	NIC	ENSG00000112394.18	novel	912	3	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	48.0901930404388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTGAACTTGGAT	NA	False	NA	17	True	GATAAA	-23	NA	111087455	111178714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_111088096_111172694_111172840_111177211_111177666_111178401
transcript_160397.known	chr6	+	1231	4	NNC	ENSG00000112394.18	novel	10757	6	NA	NA	0	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	51.389579574938	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAAACTTCTTTGAA	-1	True	NA	-16	True	NA	NA	NA	111087502	111177706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_111088096_111172694_111172840_111177211_111177564_111177565
transcript_160398.known	chr6	+	14805	4	FSM	ENSG00000173214.7	ENST00000671876.2	14805	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTTGGTTTAAGATTC	0	True	NA	5	True	AATAAA	-16	NA	111259338	111280005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111259728_111262256_111262426_111263829_111263947_111265875
transcript_160406.known	chr6	+	609	4	FSM	ENSG00000231889.8	ENST00000525151.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.4558441227157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	24	False	NA	NA	False	ATTAAA	-16	NA	111483515	111503608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111483666_111484117_111484146_111484743_111484862_111503295
transcript_160409.known	chr6	+	1106	3	FSM	ENSG00000231889.8	ENST00000449449.7	2171	3	45	1020	4	135	multi-exon	FALSE	canonical	3	46	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTCCAAGAAAAACTC	-10	True	NA	NA	False	NA	NA	NA	111483540	111577160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111483666_111574620_111574803_111576361
transcript_160411.nnic	chr6	+	474	3	NNC	ENSG00000231889.8	novel	915	3	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	163	False	NA	NA	False	ATTAAA	-16	NA	111483753	111503608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_111483797_111484743_111484862_111503295
transcript_160413.known	chr6	-	2785	10	FSM	ENSG00000056972.20	ENST00000340026.10	2785	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	25.4795972602239	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-9	True	NA	-4	True	AATAAA	-19	NA	111606278	111558939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111601195_111601307_111605775
transcript_160414.known	chr6	-	5833	9	FSM	ENSG00000056972.20	ENST00000368761.11	5833	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	5.85234995535981	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTCTCGGAGTCATC	12	True	NA	-1	True	AATAAA	-18	NA	111605878	111555380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
transcript_160415.known	chr6	-	2264	9	FSM	ENSG00000056972.20	ENST00000359831.8	2264	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.7194469312642	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	19	True	NA	-4	True	AATAAA	-19	NA	111605871	111558939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566558_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
transcript_160418.known	chr6	-	3628	14	FSM	ENSG00000010810.17	ENST00000354650.7	3628	14	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	76.1878711867993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-13	True	NA	2	True	ATTAAA	-23	NA	111873452	111660331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_160421.known	chr6	-	3234	14	FSM	ENSG00000010810.17	ENST00000368682.7	3234	14	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	94.5419352181502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	607	False	NA	2	True	ATTAAA	-23	NA	111873067	111660331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_160429.known	chr6	-	2225	12	FSM	ENSG00000074935.14	ENST00000368662.10	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	28.3621794497619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTTCTAGCCTTAAC	17	True	NA	-5	True	AATAAA	-28	NA	112087482	112070662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_160443.nic	chr6	-	782	7	ISM	ENSG00000074935.14	ENST00000605457.5	1645	12	-25	4947	-5	159	5prime_fragment	FALSE	canonical	3	90	junction_1	20.7498326633146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	13	False	112087547	-10	True	AATAAA	-16	NA	112087534	112076275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_160446.known	chr6	+	2551	4	FSM	ENSG00000203778.8	ENST00000368656.7	2551	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	10.1434160364686	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAAAAGTGTAACATTC	-38	True	NA	NA	False	AATAAA	-24	NA	112087590	112102790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_112087721_112097040_112097202_112099269_112099409_112100669
transcript_160447.known	chr6	+	598	4	FSM	ENSG00000203778.8	ENST00000604268.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.9556837726075	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	9	True	NA	20	True	AATAAA	-28	NA	112087637	112100895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_112087710_112097040_112097202_112099269_112099409_112100669
transcript_160448.known	chr6	-	619	2	FSM	ENSG00000112769.20	ENST00000368638.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGTTGAGAGTTGAA	-2	True	NA	NA	False	AATAAA	-23	NA	112254567	112253781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_112254292_112254458
transcript_160449.known	chr6	-	645	2	FSM	ENSG00000112769.20	ENST00000453937.2	645	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGATGTTGAGAGTTG	172	False	NA	NA	False	AATAAA	-21	NA	112254578	112253783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_112254292_112254441
transcript_160450.known	chr6	+	4296	2	FSM	ENSG00000277443.3	ENST00000612661.2	4296	2	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCTAAAATAGGATTTT	-26	True	NA	21	True	AATAAA	-24	NA	113857344	113863475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_113857848_113859682
transcript_160453.known	chr6	+	2016	10	FSM	ENSG00000228624.8	ENST00000519104.5	2016	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.71404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTGATATTCATATT	NA	False	NA	NA	False	AATAAA	-19	NA	113969700	114340738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_113970279_113991892_113992019_113993342_113993488_113995599_113996061_114088936_114089020_114116117_114116181_114178652_114178721_114179024_114179158_114235629_114235772_114340521
transcript_160454.known	chr6	+	591	4	FSM	ENSG00000228624.8	ENST00000436876.6	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.89897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGATCAGAGTCATCT	-10	True	NA	NA	False	TTTAAA	-16	NA	113970105	113995644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_113970279_113991892_113992121_113993342_113993488_113995599
transcript_160471.known	chr6	-	2084	15	FSM	ENSG00000196591.12	ENST00000368632.6	2084	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	1100.97879690051	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	0	True	NA	24	True	ATTAAA	-14	NA	113971157	113940717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113962366_113962395_113970856
transcript_160482.known	chr6	-	2000	14	FSM	ENSG00000196591.12	ENST00000519108.5	2000	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	854.106959475716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	636	False	NA	24	True	ATTAAA	-14	NA	113970724	113940717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970479
transcript_160483.known	chr6	-	9737	14	FSM	ENSG00000196591.12	ENST00000519065.6	9737	14	0	0	0	0	multi-exon	FALSE	canonical	3	2717	junction_10	195.507835161324	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTCTTGCTGATCAC	9	True	NA	NA	False	AATAAA	-14	NA	113971148	113933027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
transcript_160492.nic	chr6	-	1836	12	ISM	ENSG00000196591.12	ENST00000519065.6	9737	14	-264	10369	-255	1983	5prime_fragment	FALSE	canonical	3	2717	junction_8	195.209910329648	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAGAATTGAAGAAGATAA	NA	False	NA	-11	True	AAGAAA	-32	NA	113971412	113943396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
transcript_160493.known	chr6	-	733	3	FSM	ENSG00000196591.12	ENST00000521233.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	3070	junction_2	141.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTAGTTTGCTCCCCTGA	21	True	NA	NA	False	NA	NA	NA	113971136	113958426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113958767_113959905_113960019_113970856
transcript_160494.known	chr6	-	690	2	FSM	ENSG00000196591.12	ENST00000520170.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	3070	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTTACAATAA	20	True	NA	NA	False	NA	NA	NA	113971137	113959609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113960019_113970856
transcript_1605.nnic	chr1	-	697	4	NNC	ENSG00000162585.17	novel	727	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_2	551.033574294707	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-6	True	NA	-14	True	ATTAAA	-40	NA	2194772	2189547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_2189782_2193638_2193911_2194027_2194134_2194687
transcript_16050.known	chr1	-	954	6	FSM	ENSG00000158796.17	ENST00000463227.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	130.202304127078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGCGTGACTACAT	304	False	NA	NA	False	NA	NA	NA	161132476	161122332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
transcript_160500.known	chr6	-	3869	5	FSM	ENSG00000249853.9	ENST00000312719.10	3869	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	16.1012421881046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCGGTATATATTGCTT	-1	True	NA	-9	True	AATAAA	-17	NA	114343023	114055595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_114058191_114062738_114062878_114168350_114168463_114228584_114228779_114342194
transcript_160503.nnic	chr6	-	2791	4	NIC	ENSG00000249853.9	novel	3869	5	NA	NA	-4	-888	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.3620476419435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATGGATTAAAATTACT	-5	True	NA	-34	True	ATTAAA	-21	NA	114343027	114056483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_114058191_114062738_114062878_114168350_114168463_114342194
transcript_160504.nnic	chr6	-	2842	4	NIC	ENSG00000249853.9	novel	3869	5	NA	NA	0	-888	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.8865931067677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATGGATTAAAATTACT	-1	True	NA	-34	True	ATTAAA	-21	NA	114343023	114056483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_114058191_114168350_114168463_114228584_114228779_114342194
transcript_160506.nic	chr6	-	1604	3	ISM	ENSG00000249853.9	ENST00000312719.10	3869	5	-205	112491	-205	-610	5prime_fragment	FALSE	canonical	3	52	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTGCGTGTGTTGT	NA	False	NA	-5	True	AATGAA	-33	NA	114343228	114168086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_114168463_114228584_114228779_114342194
transcript_160509.known	chr6	+	6919	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_6	43.8360959231673	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	0	True	NA	22	True	ATTAAA	-15	NA	116100852	116249497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
transcript_16051.known	chr1	-	1527	6	FSM	ENSG00000158796.17	ENST00000490843.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	141.779547185058	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTATGAGAGCTCTTAA	-9	True	NA	NA	False	NA	NA	NA	161132667	161121786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130844_161132550
transcript_160514.known	chr6	+	667	7	FSM	ENSG00000178425.14	ENST00000419791.3	667	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	176.240996617952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTAAAGTGGGTCCTG	-2	True	NA	NA	False	NA	NA	NA	116100850	116145495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116145437
transcript_160516.nnic	chr6	-	2532	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-53	0	multi-exon	FALSE	canonical	3	42	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-1	True	NA	-4	True	AATAAA	-15	NA	116254128	116249963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr6_-_116250419_116252051
transcript_160517.known	chr6	-	4112	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	14	True	NA	-4	True	AATAAA	-15	NA	116254075	116249963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_116250000_116254100
transcript_160520.known	chr6	+	1127	3	FSM	ENSG00000188820.13	ENST00000368605.3	1127	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGAGTGCTTTTTTTC	-1	True	NA	4	True	AATAAA	-9	NA	116461374	116463771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116461430_116461871_116462455_116463282
transcript_160524.known	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	260.055724012829	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	-28	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_160525.known	chr6	+	5385	7	FSM	ENSG00000111832.13	ENST00000466444.7	5385	7	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_4	46.7285304236668	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAAAGCTACCTCAT	-13	True	NA	NA	False	AATAAA	-19	NA	116571503	116597675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_160526.known	chr6	+	857	7	FSM	ENSG00000111832.13	ENST00000368590.9	857	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	307.743760655228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGAATTTCTTAAATTG	-1	True	NA	NA	False	NA	NA	NA	116571408	116590298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116571656_116572857_116572986_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271
transcript_160529.nic	chr6	+	687	5	ISM	ENSG00000111832.13	ENST00000466444.7	5385	7	-104	7314	-9	0	5prime_fragment	FALSE	canonical	3	613	junction_4	48.9336285186374	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATGAAAGAAGAAGAACA	-10	True	NA	NA	False	ATTAAA	-7	NA	116571399	116590361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271
transcript_160531.nic	chr6	+	713	5	ISM	ENSG00000111832.13	ENST00000487832.6	1427	8	-112	4624	-32	-1334	5prime_fragment	FALSE	canonical	3	95	junction_1	300.486584559111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAGAAGAAGCTGAAAA	NA	False	NA	NA	False	GATAAA	-38	NA	116571376	116588964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841
transcript_160532.nic	chr6	+	705	4	ISM	ENSG00000111832.13	ENST00000466444.7	5385	7	-233	8711	-138	-1334	5prime_fragment	FALSE	canonical	3	673	junction_1	29.8105126870818	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAGAAGAAGCTGAAAA	NA	False	NA	NA	False	GATAAA	-38	NA	116571270	116588964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841
transcript_160538.nic	chr6	-	1897	10	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	43.9621048934951	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-7	True	NA	-1	True	AATAAA	-22	NA	116668791	116635617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116666913_116668565
transcript_160540.known	chr6	-	2167	10	FSM	ENSG00000153975.10	ENST00000368576.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	14.1220430096156	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	18	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116667208_116668565
transcript_160543.known	chr6	+	2150	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_14	23.9310233285378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	4	True	NA	2	True	AATAAA	-17	NA	116681210	116741866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
transcript_160545.known	chr6	+	11288	14	FSM	ENSG00000196911.11	ENST00000368564.7	11288	14	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_4	17.2290521122432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTATGCTTTTTA	4	True	NA	3	True	AATAAA	-18	NA	116681210	116741867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135
transcript_160549.known	chr6	+	689	6	FSM	ENSG00000196911.11	ENST00000413340.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	35.6561355169065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTAAAGTTTTCTTT	-20	True	NA	NA	False	AAGAAA	-20	NA	116681186	116698798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116681339_116681446_116681553_116689319_116689454_116692054_116692157_116692292_116692393_116698703
transcript_160553.known	chr6	-	1032	4	FSM	ENSG00000183807.8	ENST00000368557.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	1.63299316185545	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTGTGTGTGGATT	7	True	NA	-3	True	TATAAA	-16	NA	116765719	116752196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_116752696_116761976_116762086_116765146_116765256_116765404
transcript_160554.known	chr6	+	3614	15	FSM	ENSG00000164465.19	ENST00000338728.10	3614	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_12	13.1008645921261	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTGACTCTCACTAG	16	True	NA	16	True	AATAAA	-16	NA	117482673	117549797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_117482894_117503766_117503980_117519815_117519951_117521524_117521577_117525361_117525435_117532259_117532394_117537184_117537226_117538619_117538836_117539254_117539380_117540667_117540816_117540917_117541026_117543123_117543212_117544527_117544578_117545477_117545598_117547906
transcript_160556.known	chr6	-	4597	9	FSM	ENSG00000047932.14	ENST00000368498.7	4597	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	68.669384553817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	-24	True	NA	-3	True	AATAAA	-24	NA	117602511	117560268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117577447_117577472_117578899_117579065_117602003
transcript_160557.known	chr6	-	4590	8	FSM	ENSG00000047932.14	ENST00000052569.10	4590	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_6	19.4820692024272	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	13	False	NA	-3	True	AATAAA	-24	NA	117602528	117560268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117578899_117579065_117602003
transcript_16056.nnic	chr1	-	2040	6	NNC	ENSG00000158796.17	novel	2344	6	NA	NA	76	-354	intron_retention	FALSE	canonical	3	14	junction_5	137.139928540159	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTTCCCCTTTGCTTT	406	False	NA	-9	True	AATAAA	-15	NA	161132374	161121330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132204
transcript_160560.nic	chr6	-	1070	3	ISM	ENSG00000047932.14	ENST00000052569.10	4590	8	-346	15050	-332	-15047	5prime_fragment	FALSE	canonical	3	122	junction_1	16.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAGCACAACTTGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	117602874	117575318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_117575353_117578899_117579065_117602003
transcript_160561.nic	chr6	-	690	2	ISM	ENSG00000047932.14	ENST00000052569.10	4590	8	1	18630	1	-18627	5prime_fragment	FALSE	canonical	3	155	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGTTTAGAGAGTGAC	14	False	117602541	NA	False	NA	NA	NA	117602527	117578898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_117579065_117602003
transcript_160565.known	chr6	+	4796	5	FSM	ENSG00000153989.8	ENST00000368494.4	4796	5	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	12.1860576069539	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTCCACATTCAGTTA	1	True	NA	NA	False	AATAAA	-14	NA	117675468	117710727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_117676086_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_160570.known	chr6	-	7373	13	FSM	ENSG00000111860.14	ENST00000368491.8	7373	13	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_7	5.07376147996292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCTCTAAGAGCCT	-28	True	NA	-15	True	AATAAA	-16	NA	118651591	118460771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118465569_118469071_118469304_118470536_118470645_118479870_118479922_118480395_118480514_118481778_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_160572.nic	chr6	-	2109	8	ISM	ENSG00000111860.14	ENST00000368491.8	7373	13	-66	21031	-66	0	5prime_fragment	FALSE	canonical	3	19	junction_2	5.14682386704338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTAGTAACTACCGTTC	-1	True	NA	NA	False	GATAAA	-36	NA	118651657	118481802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_160573.nic	chr6	-	2041	8	ISM	ENSG00000111860.14	ENST00000368491.8	7373	13	-66	21099	-66	-68	5prime_fragment	FALSE	canonical	3	19	junction_2	5.14682386704338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAGAGATCAAAAAGCA	-1	True	NA	NA	False	AAGAAA	-45	NA	118651657	118481870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_160583.known	chr6	-	2079	6	FSM	ENSG00000111860.14	ENST00000419517.2	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	3.38230690505755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTCTGTCATTTACC	651	False	NA	NA	False	AATAAA	-37	NA	118651857	118491631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_160593.known	chr6	-	5219	14	FSM	ENSG00000111877.18	ENST00000619706.5	5219	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	14.8323969741913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGTACAAATTTAGTG	-1	True	NA	-10	True	AATAAA	-21	NA	118935159	118813454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118816295_118826146_118826293_118826781_118826865_118827926_118828131_118829047_118829251_118856370_118856546_118911649_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
transcript_160596.known	chr6	-	5101	13	FSM	ENSG00000111877.18	ENST00000316316.10	5101	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	16.0595679338587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTGGCTGAGTCTTG	-4	True	NA	3	True	AATAAA	-34	NA	118935162	118813441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118816295_118826146_118826293_118826781_118826865_118827926_118828131_118829047_118829251_118856370_118856546_118911649_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
transcript_160598.nic	chr6	-	2635	8	ISM	ENSG00000111877.18	ENST00000619706.5	5219	14	-14	97142	-11	0	5prime_fragment	FALSE	canonical	3	32	junction_6	10.40211909337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	NA	False	NA	-2	True	AATAAA	-17	NA	118935173	118910596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
transcript_160599.known	chr6	-	2442	7	FSM	ENSG00000111877.18	ENST00000316068.7	2442	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	13.9453297638393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	44	False	NA	-2	True	AATAAA	-17	NA	118935114	118910596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
transcript_160601.known	chr6	+	2434	4	FSM	ENSG00000111875.8	ENST00000229595.6	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_3	78.8542960148653	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCAGTGGTTAATATAA	-34	True	NA	-63	True	AATAAA	-20	NA	118894151	118909171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_118894523_118900765_118900882_118905651_118905829_118907401
transcript_160604.known	chr6	-	4048	19	FSM	ENSG00000111879.20	ENST00000621231.4	4048	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	84.0813098534191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTTTATTTTTTTCT	20	True	NA	0	True	AATAAA	-18	NA	119078647	118959828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118960185_118961760_118961964_118964666_118964772_118966834_118966953_118974427_118974575_118975023_118975209_118975916_118976045_118979364_118979519_118980137_118980351_119002898_119003050_119003500_119003623_119006446_119006609_119009548_119009574_119011330_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119078140
transcript_160609.nic	chr6	-	1483	2	ISM	ENSG00000111879.20	ENST00000621231.4	4048	19	-234	64243	-217	-12895	5prime_fragment	FALSE	canonical	3	155	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATAGGAAAATTAAAGACA	NA	False	NA	-4	True	NA	NA	NA	119078881	119024071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_119024814_119078140
transcript_160610.nic	chr6	-	1063	2	ISM	ENSG00000111879.20	ENST00000621231.4	4048	19	-234	64663	-217	-13315	5prime_fragment	FALSE	canonical	3	155	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAGGAAATTTGAAGAA	NA	False	NA	-8	True	NA	NA	NA	119078881	119024491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_119024814_119078140
transcript_160612.known	chr6	-	5018	13	FSM	ENSG00000111885.7	ENST00000368468.4	5018	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	10.3235841106124	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTATATTTTTCT	5	True	NA	NA	False	AATAAA	-18	NA	119349761	119177204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_119179946_119180311_119180428_119188404_119188578_119189663_119189884_119193776_119193893_119201253_119201348_119204758_119204883_119248259_119248355_119290682_119290764_119301987_119302104_119306895_119306993_119348462_119349288_119349541
transcript_160615.known	chr6	+	3083	2	FSM	ENSG00000152661.9	ENST00000282561.4	3083	2	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_1	0	587	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATTCCGTGTGAT	3	True	NA	20	True	AATAAA	-23	NA	121435645	121449727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_121435833_121446831
transcript_160616.known	chr6	+	2596	13	FSM	ENSG00000025156.13	ENST00000368455.9	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	43.4040288708574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	-2	True	NA	NA	False	AATATA	-11	NA	122399651	122433119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122427902_122427957_122431429_122431515_122431924
transcript_160618.known	chr6	+	2643	12	FSM	ENSG00000025156.13	ENST00000452194.5	2643	12	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_10	24.769015568476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	-2	True	NA	NA	False	AATATA	-11	NA	122399550	122433119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122431429_122431515_122431924
transcript_160621.known	chr6	-	3125	10	FSM	ENSG00000111897.7	ENST00000339697.5	3125	10	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_6	49.9461438346407	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGTGTACTGATTAT	-8	True	NA	-4	True	AATAAA	-15	NA	122471807	122443350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
transcript_160631.known	chr6	+	1379	7	FSM	ENSG00000135549.15	ENST00000392491.6	1379	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	205.486752749552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTCTGTGTATGTG	3	True	NA	15	True	ATTAAA	-21	NA	122471930	122725890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122472042_122477850_122477940_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_160638.nnic	chr6	+	1533	7	NNC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	165.959248679374	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTCTGTGTATGTG	NA	False	NA	15	True	ATTAAA	-21	NA	122482032	122725890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_122482267_122585920_122586008_122603503_122603624_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_160649.nnic	chr6	+	1413	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	381	junction_1	36.0255464913442	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTCTGTGTATGTG	NA	False	NA	15	True	ATTAAA	-21	NA	122482032	122725890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_160650.nnic	chr6	+	1895	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	381	junction_1	36.0255464913442	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTCTCCTTCATTTT	NA	False	NA	19	True	AATAAA	-31	NA	122482032	122726372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_160653.nnic	chr6	+	1346	5	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	165.994540572875	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTCTGTGTATGTG	NA	False	NA	15	True	ATTAAA	-21	NA	122482032	122725890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122717786_122717964_122725127
transcript_160654.known	chr6	+	1706	5	FSM	ENSG00000135549.15	ENST00000368452.7	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	186.336221653226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTCTCCTTCATTTTA	3	True	NA	20	True	AATAAA	-32	NA	122610404	122726373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122610536_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_160656.known	chr6	+	1811	4	FSM	ENSG00000135549.15	ENST00000392490.5	1811	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	199.882187522773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTCTCCTTCATTTT	2	True	NA	19	True	AATAAA	-31	NA	122610231	122726372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122610536_122633282_122633368_122717786_122717964_122725127
transcript_160657.known	chr6	+	785	4	FSM	ENSG00000164434.12	ENST00000368444.8	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.5106808355492	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTTGTTTCTAATA	-3	True	NA	6	True	AATAAA	-17	NA	122779715	122784074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122779868_122780290_122780464_122781092_122781195_122783716
transcript_160658.known	chr6	+	1763	8	FSM	ENSG00000172594.13	ENST00000368440.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.22044030202207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAGTTTTCTTAAC	-13	True	NA	10	True	AATAAA	-21	NA	122789257	122809720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122789459_122795676_122795891_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_160659.known	chr6	+	1755	7	FSM	ENSG00000172594.13	ENST00000539041.5	1755	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATGAAGTTTTCTT	246	False	NA	7	True	AATAAA	-18	NA	122789048	122809717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122789459_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_160661.known	chr6	+	11219	6	FSM	ENSG00000146352.13	ENST00000275162.10	11219	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	12.5283678106927	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCAGAAATGCGTGTGTG	-6	True	NA	10	True	AATAAA	-22	NA	122996234	123072925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122996747_122997218_122998167_123010984_123011160_123048621_123048733_123055805_123056027_123063673
transcript_160666.nnic	chr6	-	902	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49165	-223	at_least_one_novel_splicesite	FALSE	canonical	3	178	junction_2	55.2190443338424	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTGAAGAAAAGACTAAAA	NA	False	NA	4	True	AAGAAA	-18	NA	123587744	123503873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_160667.known	chr6	-	1179	8	FSM	ENSG00000186439.14	ENST00000546248.5	1179	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	90.3641160493907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAGTTGAAAAAGAC	214	False	NA	74	True	NA	NA	NA	123637093	123503650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123636753
transcript_160669.nnic	chr6	-	849	7	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49165	-8677	at_least_one_novel_splicesite	FALSE	canonical	3	178	junction_1	54.8738452169054	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAACAAAGACACTGGC	NA	False	NA	NA	False	AAAAAG	-6	NA	123587744	123512327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_160671.nnic	chr6	-	814	6	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49165	-12490	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_1	48.3760271208788	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAGTTACTTTTATTA	NA	False	NA	NA	False	AAAAAG	-43	NA	123587744	123516140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_160675.nnic	chr6	-	748	5	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49165	-1792	at_least_one_novel_splicesite	FALSE	canonical	3	235	junction_1	34.5760032392409	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACATTTCATTTTATGT	NA	False	NA	NA	False	AATACA	-9	NA	123587744	123530505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_160678.nnic	chr6	-	687	4	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49165	-18627	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_1	22.9540604009158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTTGTTTTCACCTTT	NA	False	NA	-1	True	AATAGA	-23	NA	123587744	123547340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123547373_123548453_123548613_123570922_123571133_123587458
transcript_160682.nnic	chr6	-	1872	2	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49165	-40833	at_least_one_novel_splicesite	FALSE	canonical	3	314	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTTAAGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	123587744	123569546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123571133_123587458
transcript_160684.known	chr6	+	1468	8	FSM	ENSG00000111907.21	ENST00000304877.17	1468	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.7949815095098	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	NA	False	NA	17	True	ATTAAA	-18	NA	125153648	125263497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125252021_125252037_125253716_125253756_125257097_125257159_125262833
transcript_160685.known	chr6	+	1308	6	FSM	ENSG00000111907.21	ENST00000368402.9	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	56.577734136319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	-18	True	NA	17	True	ATTAAA	-18	NA	125153732	125263497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125262833
transcript_160686.known	chr6	+	2147	5	FSM	ENSG00000111907.21	ENST00000368388.6	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	50.2810849127184	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	14	True	NA	NA	False	AGTAAA	-26	NA	125153764	125264407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125262833
transcript_160687.known	chr6	+	581	4	FSM	ENSG00000111907.21	ENST00000392483.6	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	8.04155872120988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTTATTTTAATGGA	-24	True	NA	NA	False	NA	NA	NA	125153848	125248475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281
transcript_16069.known	chr1	-	964	5	FSM	ENSG00000158796.17	ENST00000464113.1	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	132.737287526904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATCAAGCTGCTGGTA	12	True	NA	NA	False	NA	NA	NA	161132588	161122241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
transcript_160691.known	chr6	-	1446	6	FSM	ENSG00000111906.18	ENST00000398153.7	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	196.186645824837	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCTGCCTTTACATT	-24	True	NA	NA	False	GATAAA	-7	NA	125301967	125275349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125298713_125298817_125300537_125300660_125301848
transcript_160692.nnic	chr6	-	906	6	NNC	ENSG00000111906.18	novel	1446	6	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_5	330.191701894521	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATATTTATTGGAG	NA	False	NA	-30	True	AATAAA	-21	NA	125302143	125275881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_125276244_125277101_125277241_125292840_125292910_125298713_125298817_125300537_125300660_125302032
transcript_160695.known	chr6	-	1350	5	FSM	ENSG00000111906.18	ENST00000318787.13	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_3	237.518815044198	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCTGCCTTTACATT	-31	True	NA	NA	False	GATAAA	-7	NA	125301974	125275349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125301848
transcript_160696.nnic	chr6	-	803	5	NNC	ENSG00000111906.18	novel	1350	5	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_4	379.766046402255	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATATTTATTGGAG	NA	False	NA	-30	True	AATAAA	-21	NA	125302143	125275881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125302032
transcript_160697.known	chr6	-	509	5	FSM	ENSG00000237742.8	ENST00000606334.6	528	5	15	4	15	-4	multi-exon	FALSE	canonical	3	19	junction_4	6.80073525436772	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-1	True	NA	-1	True	AATAAA	-21	NA	125745610	125578557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125744901_125745066_125745584
transcript_1607.known	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	481.312788111847	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-5	True	NA	0	True	NA	NA	NA	2194748	2191900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
transcript_160704.nnic	chr6	-	2302	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	13.5	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCACATAGCCAAAGCA	NA	False	NA	19	True	AAAAAG	-5	NA	125707424	125687835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125689647_125694166_125694399_125707165
transcript_160707.nnic	chr6	-	771	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	9	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	125707418	125701889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125702306_125705044_125705147_125707165
transcript_160709.nnic	chr6	-	2064	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	61	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCACATAGCCAAAGCA	NA	False	NA	19	True	AAAAAG	-5	NA	125707418	125687835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125689647_125707165
transcript_160711.nnic	chr6	-	1827	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	61	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTGAAAGATCTGTACA	NA	False	NA	NA	False	ATTAAA	-25	NA	125707418	125688072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125689647_125707165
transcript_160717.known	chr6	+	2626	5	FSM	ENSG00000135547.9	ENST00000368364.4	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	13.4420050587701	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATGTGGATGAGTTG	-8	True	NA	6	True	ATTAAA	-19	NA	125749631	125761269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125749860_125751800_125751880_125752006_125752091_125754464_125754547_125759116
transcript_16072.known	chr1	+	1518	7	FSM	ENSG00000158793.14	ENST00000392190.9	1518	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3394997718502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	8	True	NA	4	True	AATAAA	-13	NA	161118117	161121193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161118226_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_160721.known	chr6	+	6264	16	FSM	ENSG00000111912.20	ENST00000392477.7	6264	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	4.94592986426438	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTAGTTCTT	-4	True	NA	NA	False	ATTAAA	-21	NA	125790959	125932034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125791068_125815290_125815405_125855019_125855241_125874888_125874969_125878262_125878371_125881089_125881204_125882425_125882552_125885158_125885344_125888938_125889982_125890641_125890811_125915332_125915481_125920942_125921069_125922681_125922835_125927662_125927759_125928173_125928248_125928635
transcript_160723.known	chr6	+	3325	5	FSM	ENSG00000111911.7	ENST00000229633.7	3325	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3.77491721763537	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTCTGGACTTTT	-2	True	NA	19	True	AATAAA	-21	NA	125956769	125980244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125957179_125966886_125967005_125972258_125972329_125974846_125974974_125977643
transcript_160731.known	chr6	+	2093	15	FSM	ENSG00000066651.20	ENST00000479748.5	2093	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	134.305944524782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	20	True	NA	19	True	AATAAA	-22	NA	125986478	126039276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126008656_126008746_126009334_126009435_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_160739.known	chr6	+	1843	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	34.2031309483016	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	4	True	NA	19	True	AATAAA	-22	NA	125986539	126039276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_16074.known	chr1	+	888	6	FSM	ENSG00000143222.12	ENST00000368003.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_5	70.9743615681043	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	-8	True	NA	24	True	AATAAA	-18	NA	161153977	161158856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
transcript_160742.nic	chr6	+	2047	13	NIC	ENSG00000066651.20	novel	1843	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	85.8671454437998	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	28	False	NA	19	True	AATAAA	-22	NA	125986486	126039276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_125986774_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_160748.known	chr6	+	809	3	FSM	ENSG00000203760.9	ENST00000368328.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_2	46.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGTCAAATCTAG	-44	True	NA	86	True	AAGAAA	-2	NA	126340114	126348875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_126340400_126346204_126346319_126348465
transcript_160749.known	chr6	+	528	3	FSM	ENSG00000203760.9	ENST00000368325.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	656	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	15	True	NA	15	True	ATTAAA	-17	NA	126340173	126348608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_126340445_126346204_126346319_126348465
transcript_160751.known	chr6	+	568	5	FSM	ENSG00000118518.17	ENST00000610162.5	568	5	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	49.4286101362359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACATGCTTCCTAC	-2	True	NA	NA	False	NA	NA	NA	127266882	127286643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_160752.known	chr6	+	843	5	FSM	ENSG00000118518.17	ENST00000480444.1	843	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	50.658168146904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGAGGAAATGGTGAAT	3	True	NA	NA	False	NA	NA	NA	127266887	127286903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127282286_127282396_127286049_127286178_127286615
transcript_160754.nic	chr6	+	2352	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	47.2175814713121	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	18	True	NA	29	True	AATAAA	-20	NA	127266869	127288362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_127267096_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_160758.known	chr6	+	2169	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	43.6942501938184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_160760.known	chr6	+	884	4	FSM	ENSG00000118518.17	ENST00000476956.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	15.2534149181967	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGCAGCAAGTAGAG	53	False	NA	NA	False	NA	NA	NA	127266725	127286891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127286049_127286178_127286615
transcript_160761.known	chr6	+	2267	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	20.5318181259127	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTGAGACTTAAAATTC	-3	True	NA	NA	False	AATAAA	-23	NA	127266848	127288567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
transcript_160763.known	chr6	+	2070	3	FSM	ENSG00000118518.17	ENST00000610153.1	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	10.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127286615
transcript_160764.known	chr6	+	2119	3	FSM	ENSG00000118518.17	ENST00000368314.6	2119	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	12	True	NA	NA	False	AATAAA	-18	NA	127266863	127288562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127266926_127280230_127280341_127286615
transcript_160765.known	chr6	+	610	3	FSM	ENSG00000118518.17	ENST00000489534.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	32.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCAGTACGATGAGCGC	-2	True	NA	NA	False	AAGAAA	-6	NA	127266882	127286953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267045_127280230_127280341_127286615
transcript_160768.known	chr6	-	854	7	FSM	ENSG00000093144.19	ENST00000368292.10	854	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	300.752805473199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGAGCTATATTTG	-8	True	NA	NA	False	NA	NA	NA	127343359	127289987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127315933_127315975_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_160774.known	chr6	-	1009	7	FSM	ENSG00000093144.19	ENST00000430841.6	1009	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	308.075026936982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTTCGTGTGGATGT	211	False	NA	-135	True	AATAAA	-4	NA	127343398	127289868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_160776.known	chr6	-	2585	6	FSM	ENSG00000093144.19	ENST00000531967.5	2585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	300.799202126601	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	734	False	NA	-1	True	AATAAA	-22	NA	127342875	127288711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342355
transcript_160777.known	chr6	-	2443	6	FSM	ENSG00000093144.19	ENST00000474289.6	2443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	297.784754478801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAACATTTTGTGTAA	5	True	NA	-9	True	AATAAA	-14	NA	127343346	127288719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342960
transcript_160778.known	chr6	-	2339	6	FSM	ENSG00000093144.19	ENST00000454859.8	2339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	244.017704275735	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	0	True	NA	-1	True	AATAAA	-22	NA	127343609	127288711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_160782.known	chr6	-	1515	5	FSM	ENSG00000093144.19	ENST00000454591.6	1515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	292.361398785818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-7	True	NA	NA	False	ACTAAA	-3	NA	127343562	127289266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127343335
transcript_160783.nic	chr6	-	2316	5	NIC	ENSG00000093144.19	novel	2339	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	271.418841460942	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	NA	False	NA	-1	True	AATAAA	-22	NA	127343635	127288711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808_127331031_127343335
transcript_160785.nic	chr6	-	1354	5	NIC	ENSG00000093144.19	novel	1354	5	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	271.418841460942	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAAGGCTACTATTAA	NA	False	NA	-46	True	ATTAAA	-17	NA	127343741	127289779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808_127331031_127343335
transcript_160787.known	chr6	-	1966	4	FSM	ENSG00000093144.19	ENST00000368295.8	1966	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.779297410952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCATAGATGTAAAAACTA	NA	False	NA	-51	True	NA	NA	NA	127331030	127288761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808
transcript_160797.nic	chr6	-	2271	4	ISM	ENSG00000255330.9	ENST00000481848.6	11464	12	-378	74588	-378	-59124	5prime_fragment	FALSE	canonical	3	13	junction_3	12.9614813968157	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAACAACAACAGAAGATG	0	True	NA	NA	False	AAGAAA	-2	NA	127519379	127512993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_127513050_127514822_127515048_127515513_127516703_127518578
transcript_160799.known	chr6	-	4651	30	FSM	ENSG00000152894.15	ENST00000368215.7	4651	30	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_17	34.6101440182718	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAGTTCATACTTTCTA	674	False	NA	NA	False	NA	NA	NA	128520358	127969895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127970281_127973021_127973158_127973663_127973828_127976656_127976783_127976922_127977055_127981115_127981290_127982830_127982981_127983241_127983378_127985720_127985876_127990768_127990886_127991293_127991392_127992672_127992710_127995461_127995539_127996900_127996989_127998719_127998905_128005083_128005245_128009129_128009266_128064757_128064795_128067518_128067793_128078812_128078919_128082436_128082639_128083714_128083825_128089689_128089993_128184431_128184726_128218921_128219097_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_16080.known	chr1	+	2315	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	0	0	0	0	multi-exon	FALSE	non_canonical	3	76	junction_1	36.9440645479818	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	5	True	NA	3	True	AATAAA	-16	NA	161159499	161165723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_160804.nic	chr6	-	2630	7	ISM	ENSG00000152894.15	ENST00000524534.5	2441	14	-668	120353	-567	643	5prime_fragment	FALSE	canonical	3	149	junction_1	19.2649653228053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATATAACCACACATCC	NA	False	NA	NA	False	ATTAAA	-4	NA	128521183	128183788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_128184726_128218921_128219097_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_160807.known	chr6	-	1722	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGAGTTGAGTTTTC	5	True	NA	NA	False	AAAAAG	-22	NA	128520587	128321040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_128322311_128397565_128397689_128520258
transcript_160808.nic	chr6	-	1329	2	ISM	ENSG00000152894.15	ENST00000525459.1	1722	3	-596	76244	-567	-75034	5prime_fragment	FALSE	canonical	3	186	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAGAATAAACAAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-43	NA	128521183	128397284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_128397689_128520258
transcript_160809.known	chr6	-	4414	15	FSM	ENSG00000146376.11	ENST00000368149.3	4414	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	4.96312936172577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATTCTTAAAGGAG	-1	True	NA	-1	True	AATAAA	-29	NA	129710177	129576131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_160815.nic	chr6	-	1525	11	ISM	ENSG00000146376.11	ENST00000368149.3	4414	15	-67	24665	-67	-22378	5prime_fragment	FALSE	canonical	3	44	junction_8	4.6743983570081	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTCATGAATGTAGCA	97	False	NA	NA	False	AATAAA	-14	NA	129710244	129600796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_160817.known	chr6	+	4206	23	FSM	ENSG00000198945.8	ENST00000361794.7	4206	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	11.0094812632544	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTTACATATGTAT	-2	True	NA	94	True	AATAAA	-13	NA	130018580	130141438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130049755_130049831_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_160821.nnic	chr6	-	2011	11	NNC	ENSG00000164483.17	novel	2093	12	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	23.2680037820179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	7294	False	NA	-13	True	AATAAA	-17	NA	130215694	130144314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130215472
transcript_160823.nic	chr6	-	2128	10	ISM	ENSG00000164483.17	ENST00000457563.6	1877	11	254	-3	9	0	3prime_fragment	FALSE	canonical	3	47	junction_4	17.1147182345171	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	5	True	NA	-13	True	AATAAA	-17	NA	130215633	130144314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194
transcript_160825.known	chr6	-	3690	8	FSM	ENSG00000164483.17	ENST00000532763.5	3690	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.2613908333621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCCAACTTTTCATG	-4	True	NA	NA	False	NA	NA	NA	130215642	130159531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130162276_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209603_130214336_130214527_130215194_130215295_130215533
transcript_160827.known	chr6	-	993	6	FSM	ENSG00000164483.17	ENST00000324172.10	993	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	33.3766385365573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCTGTAACTTTATGAG	7698	False	NA	-8	True	AATAAA	-15	NA	130215290	130182987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130183310_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194
transcript_160828.known	chr6	+	2899	2	FSM	ENSG00000164484.12	ENST00000617887.4	2899	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTTCATGTTTTCC	173	False	NA	12	True	AATAAA	-23	NA	130366280	130443061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_130366525_130440406
transcript_160833.known	chr6	+	3233	3	FSM	ENSG00000164484.12	ENST00000296978.4	3233	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTTTTCCTTTAAG	25	True	NA	18	True	AATAAA	-29	NA	130366016	130443067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_130366525_130385172_130385237_130440406
transcript_160839.known	chr6	-	4186	18	FSM	ENSG00000079819.19	ENST00000527411.5	4186	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.35009679348	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAACTTGTCACTTCTCT	24	False	NA	-12	True	AATAAA	-13	NA	131063258	130839352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130840595_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_160840.known	chr6	-	4247	18	FSM	ENSG00000079819.19	ENST00000628542.2	4247	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_17	45.679112457215	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	131063322	130839346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_160854.known	chr6	+	2461	2	FSM	ENSG00000118507.18	ENST00000342266.4	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	13	False	NA	5	True	AATAAA	-17	NA	131250158	131283532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131250617_131281529
transcript_160856.known	chr6	-	4446	30	FSM	ENSG00000112282.18	ENST00000368060.7	4446	30	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	29.4385027794849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGATTGTTTCCCGACTC	-22	True	NA	-26	True	AATAAA	-3	NA	131628229	131586748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_131586938_131587708_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_160857.known	chr6	-	5247	29	FSM	ENSG00000112282.18	ENST00000368068.8	5247	29	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_18	24.873865475102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-35	True	NA	-9	True	AATAAA	-20	NA	131628242	131586731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_16086.known	chr1	+	2195	13	FSM	ENSG00000143258.16	ENST00000289865.12	2195	13	0	0	0	0	multi-exon	FALSE	non_canonical	3	111	junction_1	25.0780725380206	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	-16	True	NA	3	True	AATAAA	-16	NA	161159478	161165723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_160862.known	chr6	+	3107	25	FSM	ENSG00000197594.14	ENST00000513998.5	3107	25	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	23.7814119756493	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGCATTGGGCAAACAG	15	False	NA	-85	True	AATAAA	-4	NA	131808033	131890864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131808276_131847775_131847849_131849989_131850107_131851141_131851268_131852174_131852236_131854925_131855024_131858667_131858748_131860386_131860507_131861594_131861705_131864505_131864572_131864891_131864939_131868017_131868127_131869357_131869490_131872069_131872102_131872922_131873051_131874267_131874338_131875775_131875864_131876991_131877162_131878541_131878594_131879879_131880035_131882344_131882475_131883693_131883775_131884930_131885064_131886561_131886725_131890340
transcript_160889.nnic	chr6	+	2580	3	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-107	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	10.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7876	False	NA	10	True	AATAAA	-16	NA	131901855	131920562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_131902152_131910784_131910956_131918449
transcript_16089.nic	chr1	+	2560	13	NIC	ENSG00000143258.16	novel	2315	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	76	junction_1	37.9579445644197	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	-18	True	NA	3	True	AATAAA	-16	NA	161159476	161165723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164943_161165028_161165144_161165356
transcript_160899.nnic	chr6	+	2111	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-82	-564	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	21	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATTGAAACAAAAGCAAA	7901	False	NA	11	True	NA	NA	NA	131901880	131920001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_160900.nnic	chr6	+	2672	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-82	-3	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	21	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7901	False	NA	10	True	AATAAA	-16	NA	131901880	131920562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_160903.known	chr6	+	2305	2	FSM	ENSG00000236673.5	ENST00000454596.1	2305	2	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	27	False	NA	13	True	AATAAA	-19	NA	131901962	131920565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131902152_131918449
transcript_160911.known	chr6	-	2338	5	FSM	ENSG00000118523.6	ENST00000367976.4	2338	5	0	0	0	0	multi-exon	TRUE	canonical	3	341	junction_4	51.3225096814254	1304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGGTTATTCATTTAT	-1	True	NA	NA	False	AATAAA	-21	NA	131951372	131948175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_131949561_131949948_131950161_131950291_131950544_131950769_131950993_131951106
transcript_160922.known	chr6	-	2989	12	FSM	ENSG00000079931.15	ENST00000367963.8	2989	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	5.70196428384244	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTGGTATTTTATA	23	True	NA	NA	False	AATAAA	-16	NA	132401475	132296054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132297318_132297786_132297956_132315634_132315778_132320628_132320689_132322678_132322871_132323930_132324098_132328012_132328116_132328414_132328595_132372607_132372692_132372829_132372998_132374630_132374778_132401162
transcript_160923.known	chr6	-	15845	10	FSM	ENSG00000079950.14	ENST00000367941.7	15845	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	20.9608688916122	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCATTTTTACATTTT	-32	True	NA	NA	False	TATAAA	-23	NA	132513116	132445866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132460851_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_160930.known	chr6	-	1090	10	FSM	ENSG00000079950.14	ENST00000367937.4	1090	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	62.8737712493144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTTGAATGTAGTT	111	False	NA	NA	False	NA	NA	NA	132513198	132461713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132461861_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_160938.known	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	28.3590670930927	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-6	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
transcript_160945.known	chr6	+	503	6	FSM	ENSG00000112306.8	ENST00000230050.4	503	6	0	0	0	0	multi-exon	FALSE	canonical	3	6218	junction_1	1371.47284333304	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	0	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815089_132816460_132816564_132816959_132817062_132817479
transcript_160946.known	chr6	+	639	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	3440.23388739777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	0	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
transcript_160948.known	chr6	+	1625	7	FSM	ENSG00000028839.10	ENST00000613034.4	1625	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.694364576393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATAACTTTTATTCCC	-3	True	NA	18	True	AATAAA	-23	NA	133952169	133987499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_133952731_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
transcript_160949.known	chr6	+	4199	7	FSM	ENSG00000028839.10	ENST00000237264.9	4199	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	49.724798195222	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTATGCATTTT	-1	True	NA	9	True	AATAAA	-22	NA	133953223	133990432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
transcript_160952.known	chr6	-	5572	5	FSM	ENSG00000146411.6	ENST00000275230.6	5572	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	3.89711431702997	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTGCATAGATTTTAAA	1	True	NA	NA	False	AATACA	-38	NA	134052624	133987580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_133991309_134001996_134002130_134006811_134006935_134028380_134029722_134052377
transcript_160954.known	chr6	-	3245	14	FSM	ENSG00000118515.12	ENST00000367858.10	3245	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	18.0403886128258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATATATTGTGTCATG	-5	True	NA	-9	True	AATAAA	-14	NA	134318112	134169255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134207355_134207432_134261932_134262149_134317391
transcript_160955.known	chr6	-	2401	12	FSM	ENSG00000118515.12	ENST00000237305.11	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_11	6.61078507734467	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATTGTGTCATGTGTT	3447	False	NA	-5	True	AATAAA	-18	NA	134174896	134169251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_160956.known	chr6	-	2686	12	FSM	ENSG00000118515.12	ENST00000413996.7	2686	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	12.2804689387406	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTCATGTGTTAT	2352	False	NA	-3	True	AATAAA	-20	NA	134175991	134169249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134175543
transcript_160961.known	chr6	-	7087	18	FSM	ENSG00000112339.15	ENST00000367837.10	7087	18	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_7	74.9939328572514	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGTAAAAAGAGAATAT	-15	True	NA	NA	False	NA	NA	NA	135054822	134960377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_160965.known	chr6	-	2703	17	FSM	ENSG00000112339.15	ENST00000367826.6	2703	17	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_15	196.62471193558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTGTGTTTTGTT	-12	True	NA	NA	False	AATAAA	-19	NA	135054819	134964632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135050581_135050648_135054648
transcript_160968.known	chr6	-	2636	17	FSM	ENSG00000112339.15	ENST00000415177.6	2636	17	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_14	214.965831223825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAACTGTGTTTTGTTCT	-12	True	NA	NA	False	AATAAA	-21	NA	135054819	134964630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135042000_135042127_135050581_135050648_135054648
transcript_160973.known	chr6	+	3302	15	FSM	ENSG00000118513.20	ENST00000367814.8	3302	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	9.55755924781585	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTCTCTTATTT	2	True	NA	13	True	AATAAA	-23	NA	135181327	135219173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_135181537_135185902_135186021_135187833_135187906_135189790_135189884_135190126_135190348_135192323_135192559_135193837_135193919_135194355_135194461_135195747_135196003_135198907_135199051_135200084_135200200_135200289_135200416_135201638_135201750_135203216_135203325_135217863
transcript_160976.nic	chr6	-	1472	7	ISM	ENSG00000135541.22	ENST00000327035.10	3638	23	-274	75353	-238	0	5prime_fragment	FALSE	canonical	3	20	junction_5	20.7765893896632	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	402	False	NA	NA	False	AAAAAG	-2	NA	135498019	135463136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_160979.nic	chr6	-	1173	6	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-57	68815	-1	0	5prime_fragment	FALSE	canonical	3	46	junction_5	13.7317151150175	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-38	True	NA	NA	False	AAAAAG	-2	NA	135497782	135463136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_160980.nic	chr6	-	1016	6	ISM	ENSG00000135541.22	ENST00000327035.10	3638	23	-21	78063	-1	-2710	5prime_fragment	FALSE	canonical	3	20	junction_4	22.7121113065254	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCCAGTCTTCTCTA	-22	True	NA	NA	False	AAAAAG	-13	NA	135497766	135465846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_160984.nic	chr6	-	420	4	ISM	ENSG00000135541.22	ENST00000680968.1	719	5	-35	731	-3	-172	5prime_fragment	FALSE	canonical	3	20	junction_2	26.5455583227527	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCAGGTCTGAAGAAAA	-34	True	NA	NA	False	AAGAAA	-16	NA	135497778	135490649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_135490748_135492227_135492292_135497187_135497250_135497582
transcript_160985.nic	chr6	-	362	3	ISM	ENSG00000135541.22	ENST00000524469.5	1074	5	-45	27513	-1	-172	5prime_fragment	FALSE	canonical	3	46	junction_2	19.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCAGGTCTGAAGAAAA	-38	True	NA	NA	False	AAGAAA	-16	NA	135497782	135490649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_135490748_135492227_135492292_135497582
transcript_160990.known	chr6	-	1789	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	7.68513008932158	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTGTTTTGTAGCA	-21	True	NA	-10	True	AATAAA	-14	NA	136250311	136231033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
transcript_160991.known	chr6	-	1524	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	20.6792807675031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTAGCAACCAAAATTC	9916	False	NA	0	True	AATAAA	-24	NA	136250324	136231023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
transcript_160994.known	chr6	-	4373	13	FSM	ENSG00000029363.17	ENST00000527759.5	4373	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	202.846000700038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACCTAGATTACAGCC	17	True	NA	NA	False	NA	NA	NA	136289795	136259690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
transcript_161001.known	chr6	-	5371	12	FSM	ENSG00000029363.17	ENST00000527536.5	5371	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	203.388485497724	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-17	True	NA	-16	True	AATAAA	-17	NA	136289829	136258585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_16101.nic	chr1	+	2446	12	NIC	ENSG00000143258.16	novel	2195	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	111	junction_1	24.5397299721785	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	1242	False	NA	3	True	AATAAA	-16	NA	161159449	161165723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164943_161165028_161165144_161165356
transcript_161011.known	chr6	-	2512	10	FSM	ENSG00000029363.17	ENST00000628517.2	2512	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	248.634493003507	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAAAACTTTGGAATAG	-39	True	NA	NA	False	NA	NA	NA	136289851	136269263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161013.known	chr6	-	2423	9	FSM	ENSG00000029363.17	ENST00000529826.5	2423	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	265.3474137805	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATTACAAGGAATACA	-32	True	NA	0	True	AAGAAA	-16	NA	136289844	136269475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136269613_136271994_136272077_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161018.nic	chr6	-	1794	8	ISM	ENSG00000029363.17	ENST00000530767.5	4186	13	-88	12645	-18	-77	5prime_fragment	FALSE	canonical	3	66	junction_4	271.434210467739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTTTTTGAATGTAAT	751	False	NA	-1	True	AAGAAA	-8	NA	136289869	136271995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161020.nic	chr6	-	2313	8	ISM	ENSG00000029363.17	ENST00000628517.2	2512	10	-18	2732	-18	-77	5prime_fragment	FALSE	canonical	3	714	junction_4	52.8513510340318	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTTTTTGAATGTAAT	751	False	NA	-1	True	AAGAAA	-8	NA	136289869	136271995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161021.nic	chr6	-	1722	5	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-25	6598	-18	-519	5prime_fragment	FALSE	canonical	3	714	junction_1	69.7334209687149	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTGAAAGAATAACAGTAA	751	False	NA	-9	True	NA	NA	NA	136289869	136276073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161022.nic	chr6	-	1644	5	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-25	6676	-18	-597	5prime_fragment	FALSE	canonical	3	714	junction_1	69.7334209687149	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAACTTAAAGAGACTG	751	False	NA	-87	True	AATAGA	-30	NA	136289869	136276151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161023.nic	chr6	-	775	4	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-25	8901	-18	1106	5prime_fragment	FALSE	canonical	3	814	junction_2	37.982452088651	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGGGGAACCCCAAGA	751	False	NA	NA	False	AAAACA	-11	NA	136289869	136278376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161024.known	chr6	-	4186	13	FSM	ENSG00000029363.17	ENST00000530767.5	4186	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	212.361719714265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGCATGACTATGTG	31	True	NA	0	True	AATAAA	-32	NA	136289781	136259350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_161028.known	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_12	64.9126642438804	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	4	True	NA	-31	True	AATAAA	-19	NA	136550422	136342733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_161035.known	chr6	-	4497	17	FSM	ENSG00000135525.19	ENST00000618822.4	4497	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	169.847725919425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTCCTTCCTACACC	1119	False	NA	NA	False	NA	NA	NA	136550819	136342280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_161042.nic	chr6	-	1861	13	ISM	ENSG00000135525.19	ENST00000354570.8	3758	18	-76	17995	-76	-16889	5prime_fragment	FALSE	canonical	3	569	junction_7	58.9299843505456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGCAAGAGCGCCTG	1440	False	NA	NA	False	NA	NA	NA	136550498	136360728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_161043.nic	chr6	-	1756	12	ISM	ENSG00000135525.19	ENST00000354570.8	3758	18	-42	18272	-42	-17166	5prime_fragment	FALSE	canonical	3	569	junction_6	61.4158027420165	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGGCCGCACCCCACCC	1474	False	NA	NA	False	NA	NA	NA	136550464	136361005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_161045.nic	chr6	-	1404	8	ISM	ENSG00000135525.19	ENST00000354570.8	3758	18	-514	29767	-117	-28661	5prime_fragment	FALSE	canonical	3	569	junction_2	62.4633770251638	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCTGTTGGGAGCA	1002	False	NA	NA	False	NA	NA	NA	136550936	136372500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_161047.known	chr6	+	1454	10	FSM	ENSG00000112357.14	ENST00000318471.5	1454	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	11.5960827783553	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTCCCCCAAAAGACTG	5	True	NA	40	True	AATAAA	-27	NA	136822591	136913934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_136822796_136825213_136825272_136826318_136826470_136845614_136845693_136846072_136846182_136866626_136866734_136869889_136870004_136872197_136872254_136898141_136898242_136913457
transcript_161056.known	chr6	+	2343	2	FSM	ENSG00000182747.5	ENST00000331858.5	2343	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGACACATGTTCTATT	0	True	NA	29	True	AATAAA	-42	NA	136922300	136925660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_136922868_136923884
transcript_161057.known	chr6	-	3486	7	FSM	ENSG00000016402.14	ENST00000316649.10	3486	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.07769755210323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTTATTAATTCCAT	1	True	NA	NA	False	AATAAA	-42	NA	137044965	136999970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137011273_137011453_137016967_137017104_137044640
transcript_161059.known	chr6	-	3522	6	FSM	ENSG00000016402.14	ENST00000367748.4	3522	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.17612260356422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTTATTAATTCCAT	129	False	NA	NA	False	AATAAA	-42	NA	137045180	136999970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137016967_137017104_137044640
transcript_161061.known	chr6	-	2492	7	FSM	ENSG00000027697.15	ENST00000644894.1	2492	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	93.4482922975767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	143	False	NA	-15	True	AATAAA	-3	NA	137219244	137197496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137218671
transcript_161062.known	chr6	-	2074	7	FSM	ENSG00000027697.15	ENST00000367739.9	2074	7	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_4	20.0582485111072	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	2	True	NA	-3	True	AATAAA	-15	NA	137219385	137197484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219242
transcript_161065.known	chr6	-	2196	1	FSM	ENSG00000177468.7	ENST00000367734.4	2196	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGCCTTTGCCTAAAAT	-1	True	NA	NA	False	AATAAA	-20	NA	137494394	137492198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137492200_137494400
transcript_161066.known	chr6	+	4665	9	FSM	ENSG00000118503.16	ENST00000612899.5	4665	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.41411089575239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGATGTTTTCAATTG	-1	True	NA	14	True	AATAAA	-14	NA	137867258	137883312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_137867543_137871212_137871523_137874844_137875036_137875687_137875836_137875995_137876167_137877075_137877257_137878431_137879352_137880070_137880253_137881034
transcript_161068.known	chr6	+	4432	9	FSM	ENSG00000118503.16	ENST00000237289.8	4432	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	3.8405728739343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGATGTTTTCAATTG	24	False	NA	14	True	AATAAA	-14	NA	137867443	137883312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_137867495_137871212_137871523_137874844_137875036_137875687_137875836_137875995_137876167_137877075_137877257_137878431_137879352_137880070_137880253_137881034
transcript_161072.known	chr6	-	4198	3	FSM	ENSG00000112378.12	ENST00000421351.4	4198	3	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	38	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGAGCATGCGTG	0	True	NA	-1	True	AATAAA	-15	NA	138107419	138088504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_138092269_138096353_138096495_138107126
transcript_161073.nic	chr6	+	3027	17	ISM	ENSG00000112379.9	ENST00000251691.5	14859	34	-26	57522	-26	-57522	5prime_fragment	FALSE	canonical	3	39	junction_13	6.86448058850777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAGGGAGGCCCAAGA	179	False	NA	NA	False	AAGAAA	-3	NA	138161912	138287141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_138162172_138170661_138170714_138207041_138207124_138209909_138210042_138229783_138229853_138238508_138238632_138242951_138242995_138245512_138245592_138253879_138253985_138255435_138255770_138261526_138261640_138262700_138263612_138278450_138278618_138279998_138280165_138285945_138286054_138286700_138286917_138287073
transcript_161076.known	chr6	+	14859	34	FSM	ENSG00000112379.9	ENST00000251691.5	14859	34	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_22	8.63758630367024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTTACAGAATTCT	-37	True	NA	59	True	AATAAA	-13	NA	138161938	138344663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138162172_138170661_138170714_138207041_138207124_138209909_138210042_138229783_138229853_138238508_138238632_138242951_138242995_138245512_138245592_138253879_138253985_138255435_138255770_138261526_138261640_138262700_138263612_138278450_138278618_138279998_138280165_138285945_138286054_138286700_138286917_138287073_138287185_138289817_138289969_138291732_138292054_138293992_138294127_138296809_138296956_138298605_138298786_138307252_138307398_138308738_138308862_138311406_138311511_138313794_138313940_138317250_138317380_138319702_138319880_138321110_138321226_138323670_138323774_138324022_138324155_138328020_138328143_138333969_138335189_138336294
transcript_161077.known	chr6	+	844	4	FSM	ENSG00000051620.11	ENST00000367697.7	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	642.87963276357	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAGTACTACTATTA	-39	True	NA	35	True	AGTAAA	-20	NA	138404246	138413173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138404598_138405144_138405281_138405970_138406034_138412879
transcript_161078.known	chr6	+	10010	4	FSM	ENSG00000051620.11	ENST00000607197.6	10010	4	0	0	0	0	multi-exon	TRUE	canonical	3	1137	junction_3	166.317634529702	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGTCTTTTTTAG	-63	True	NA	NA	False	ATTAAA	-18	NA	138404222	138422197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138404598_138405144_138405281_138405970_138406152_138412879
transcript_161083.nic	chr6	+	848	4	NIC	ENSG00000225177.6	novel	917	3	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	6.53197264742181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	-16	True	NA	26	True	AATAAA	-19	NA	138692469	138697288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_138692618_138694392_138694548_138696596_138696756_138696902
transcript_161085.known	chr6	+	917	3	FSM	ENSG00000225177.6	ENST00000432673.1	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	62	False	NA	26	True	AATAAA	-19	NA	138692547	138697288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138692618_138694392_138694548_138696596
transcript_161086.known	chr6	+	1247	6	FSM	ENSG00000024862.18	ENST00000617445.5	1247	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	15.0253119767944	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGTCTGTTTTGAA	0	True	NA	9	True	AATAAA	-19	NA	138773768	138793319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138773903_138776078_138776279_138779821_138779986_138785226_138785382_138788365_138788389_138792748
transcript_161092.known	chr6	-	3161	20	FSM	ENSG00000135597.19	ENST00000258062.9	3161	20	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	73.371479208333	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGGAGGGTAGATTGT	4	True	NA	-15	True	AATAAA	-16	NA	138988261	138904869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_161096.nic	chr6	-	3048	19	NIC	ENSG00000135597.19	novel	4533	20	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.7257811213662	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGGTAGATTGTGTTT	18	True	NA	-11	True	AATAAA	-20	NA	138988247	138904865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_138905133_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_161099.known	chr6	-	2468	19	FSM	ENSG00000135597.19	ENST00000529597.5	2468	19	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_8	92.8207485319133	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGATTGTGTTTGTTGG	667	False	NA	-6	True	AATAAA	-25	NA	138987640	138904860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_1611.known	chr1	-	1413	3	FSM	ENSG00000162585.17	ENST00000400919.7	1413	3	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	40	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTGACTGCCAAGTGT	-9	True	NA	-8	True	AATGAA	-32	NA	2194775	2184460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2185514_2193638_2193911_2194687
transcript_161107.nic	chr6	-	2695	18	ISM	ENSG00000135597.19	ENST00000450536.7	4533	20	-35	5302	-27	0	5prime_fragment	FALSE	canonical	3	276	junction_6	48.8810433745443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACCACCTAAACCTGTT	19	False	138988307	NA	False	NA	NA	NA	138988288	138908794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_161118.nnic	chr6	+	977	4	NNC	ENSG00000146386.8	novel	782	3	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	688.090594810499	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	144	False	NA	31	True	AATAAA	-23	NA	139028656	139043302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_139028876_139033748_139033856_139034154_139034222_139042718
transcript_161120.known	chr6	+	782	3	FSM	ENSG00000146386.8	ENST00000367660.4	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_2	1	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	23	True	NA	31	True	AATAAA	-23	NA	139028744	139043302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_139028876_139034154_139034222_139042718
transcript_161126.known	chr6	-	2382	2	FSM	ENSG00000164442.10	ENST00000367651.4	2382	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	1060	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTGATGAGAGTTTT	0	True	NA	NA	False	ATTAAA	-17	NA	139374648	139371806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_139373953_139374412
transcript_161128.known	chr6	+	6991	8	FSM	ENSG00000009844.16	ENST00000367630.9	6991	8	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_5	94.219890443059	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTCTATTATATCAT	-3	True	NA	23	True	AATAAA	-16	NA	142147262	142224685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_161132.known	chr6	+	3272	7	FSM	ENSG00000009844.16	ENST00000620996.4	3272	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	410.650872261206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGGCTCTCCGAGTG	NA	False	NA	3	True	AATAAA	-16	NA	142147161	142220946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142218497
transcript_161135.known	chr6	+	6822	25	FSM	ENSG00000112414.15	ENST00000367609.8	6822	25	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_22	4.71919837825592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATTCCTTTATGAGTGA	-19	True	NA	31	True	AATAAA	-28	NA	142302006	142446261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_142302332_142309543_142309645_142367568_142367911_142370169_142370794_142381950_142382020_142383759_142383844_142390257_142390344_142392947_142393001_142393895_142393959_142397612_142397756_142400484_142400597_142401993_142402059_142402619_142402831_142403801_142403974_142405687_142405829_142408149_142408270_142409873_142409920_142411304_142411412_142414968_142415097_142415795_142416065_142417272_142417370_142419820_142420105_142437433_142437536_142438211_142438365_142443336
transcript_161136.known	chr6	+	6879	24	FSM	ENSG00000112414.15	ENST00000367608.6	6879	24	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	6.35199386704337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATTCAATTCCTTTA	-2	True	NA	24	True	AATAAA	-21	NA	142301858	142446254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_142302332_142309543_142309645_142367568_142367911_142370169_142370794_142381950_142382020_142390257_142390344_142392947_142393001_142393895_142393959_142397612_142397756_142400484_142400597_142401993_142402059_142402619_142402831_142403801_142403974_142405687_142405829_142408149_142408270_142409873_142409920_142411304_142411412_142414968_142415097_142415795_142416065_142417272_142417370_142419820_142420105_142437433_142437536_142438211_142438365_142443336
transcript_161145.known	chr6	+	2136	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	39.9469648408987	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCTCTCTGTCTCTC	-8	True	NA	NA	False	ATTAAA	-19	NA	143060888	143341058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
transcript_161149.nic	chr6	+	737	5	ISM	ENSG00000146416.19	ENST00000367601.8	727	6	372	-89	14	0	3prime_fragment	FALSE	canonical	3	195	junction_3	40.0936403934589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTGTCTGAGGGAA	-29	True	NA	NA	False	NA	NA	NA	143060867	143333445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281
transcript_161150.nic	chr6	+	2812	5	ISM	ENSG00000146416.19	ENST00000275235.8	1202	7	-3	-20	-1	20	intron_retention	FALSE	canonical	3	195	junction_3	40.0936403934589	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAGATTTCACATGAAGG	1	True	NA	NA	False	NA	NA	NA	143060897	143335550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281
transcript_161157.known	chr6	+	3393	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	113.743375875501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	4	True	NA	NA	False	AATAAA	-26	NA	143060900	143190597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
transcript_161165.known	chr6	+	559	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	4	True	NA	33	True	AATAAA	-27	NA	143060900	143061606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143061213
transcript_161169.known	chr6	-	6244	6	FSM	ENSG00000189007.16	ENST00000237283.9	6244	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	32.4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTTAAAATATTATTT	2	True	NA	-23	True	AATAAA	-23	NA	143450695	143422831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_143428507_143428611_143428685_143432504_143432612_143433830_143433982_143438589_143438695_143450562
transcript_161174.known	chr6	+	2750	12	FSM	ENSG00000034693.15	ENST00000367591.5	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_7	18.8263047905349	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAATGGATTGGAATT	0	True	NA	NA	False	AATAAA	-20	NA	143450804	143490616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143451116_143459084_143459217_143462915_143462998_143468121_143468166_143470960_143471086_143471382_143471450_143471556_143471612_143472159_143472329_143474785_143474857_143479075_143479199_143485151_143485249_143489142
transcript_161187.known	chr6	-	2385	7	FSM	ENSG00000001036.14	ENST00000002165.11	2385	7	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_3	51.2978773656593	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATATTTTCTTTCTTC	-10	True	NA	NA	False	CATAAA	-18	NA	143511720	143494811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
transcript_161199.known	chr6	+	2569	13	FSM	ENSG00000112419.15	ENST00000440869.7	9633	13	0	7064	0	-43	multi-exon	FALSE	canonical	1	24	junction_5	103.288296637239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAGAAAATTGAA	-20	True	NA	-21	True	AAGAAA	-24	NA	143677964	143824121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_161207.known	chr6	+	4367	12	FSM	ENSG00000112419.15	ENST00000367582.7	4367	12	0	0	0	0	multi-exon	FALSE	canonical	1	71	junction_10	67.509534068031	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATTTTGCAGAATATG	-2	True	NA	NA	False	ATTAAA	-15	NA	143677982	143826177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_161231.nic	chr6	+	1877	9	ISM	ENSG00000112419.15	ENST00000440869.7	9633	13	-34	53803	-34	11717	5prime_fragment	FALSE	canonical	3	24	junction_5	113.925345621596	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATTCTATACTATA	NA	False	NA	25	True	AAGAAA	-11	NA	143677930	143777382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_161234.nic	chr6	+	1637	8	ISM	ENSG00000112419.15	ENST00000367582.7	4367	12	-52	48795	-34	11717	5prime_fragment	FALSE	canonical	3	207	junction_5	45.2561868585898	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATTCTATACTATA	NA	False	NA	25	True	AAGAAA	-11	NA	143677930	143777382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_161241.known	chr6	+	825	4	FSM	ENSG00000112419.15	ENST00000402863.3	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	24.4994331000173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAAGTAATAATC	34	True	NA	NA	False	ATTAAA	-4	NA	143678018	143754138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753
transcript_161242.known	chr6	+	358	2	FSM	ENSG00000112419.15	ENST00000545919.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGAGTTCTGATTTG	114	False	NA	NA	False	AATAAA	-14	NA	143678172	143712336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015
transcript_161243.known	chr6	+	1853	11	FSM	ENSG00000135521.9	ENST00000367576.6	1853	11	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	40.1492216611979	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTGGTGTATTCATTT	-35	True	NA	15	True	ATTAAA	-24	NA	143843337	143863812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085_143863287_143863416
transcript_161248.nic	chr6	+	1419	10	ISM	ENSG00000135521.9	ENST00000367576.6	1853	11	-17	581	-17	-581	5prime_fragment	FALSE	canonical	3	397	junction_1	41.3387093278067	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAGCAAAGAAGATAAAA	-52	True	NA	NA	False	NA	NA	NA	143843320	143863231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085
transcript_161254.known	chr6	-	690	1	FSM	ENSG00000169976.7	ENST00000367569.4	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	822	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGGTGTGAACTTTC	-4	True	NA	-7	True	CATAAA	-17	NA	144095573	144094883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_144094900_144095600
transcript_161255.known	chr6	+	5504	2	FSM	ENSG00000135604.10	ENST00000367568.5	5504	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTGAGTGAGACTACAA	2	True	NA	NA	False	AATAAA	-16	NA	144150516	144191939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_144150704_144186622
transcript_161258.known	chr6	+	3220	25	FSM	ENSG00000152818.19	ENST00000367526.8	3220	25	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	24.3086347255913	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCGGCCAACCAATGTTT	-6	True	NA	NA	False	NA	NA	NA	144583209	144851003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_144583601_144678405_144678579_144700086_144700244_144730356_144730487_144748245_144748515_144751805_144751953_144754719_144754799_144757928_144757990_144771906_144771969_144774289_144774365_144781921_144782124_144789193_144789280_144793833_144793992_144797823_144797991_144803035_144803148_144820881_144821019_144827347_144827387_144827610_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
transcript_161263.nic	chr6	+	3067	18	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-349	401598	-349	25078	5prime_fragment	FALSE	canonical	3	22	junction_15	6.86901674211529	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGATAAAAGAGTATATGAA	6	True	NA	NA	False	NA	NA	NA	144284985	144451436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210_144447319_144447601_144447782_144448599_144448770_144451369
transcript_161264.nic	chr6	+	3055	18	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-279	401540	-279	25136	5prime_fragment	FALSE	canonical	3	22	junction_15	6.86901674211529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACATAAACCACATA	38	False	NA	NA	False	AAAAAG	-11	NA	144285055	144451494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210_144447319_144447601_144447782_144448599_144448770_144451369
transcript_16127.known	chr1	+	1667	13	FSM	ENSG00000143224.18	ENST00000652473.1	1667	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	93.8185305079261	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAACTCTCATTCATGA	10	True	NA	-32	True	NA	NA	NA	161166466	161171176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_161271.nic	chr6	+	2631	15	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-408	405794	-408	20882	5prime_fragment	FALSE	canonical	3	23	junction_8	6.20113551155376	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGCTTTAAATAAAGT	-13	True	NA	NA	False	NA	NA	NA	144284926	144447240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210
transcript_161272.nic	chr6	+	3588	14	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-408	407665	-408	19011	5prime_fragment	FALSE	canonical	3	23	junction_8	6.31987566352115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATACTCTATTCCCACA	-13	True	NA	NA	False	NA	NA	NA	144284926	144445369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280
transcript_161275.nic	chr6	+	1812	9	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-408	423323	-408	3353	5prime_fragment	FALSE	canonical	3	23	junction_8	7.24137417898012	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTGAAGAAGAGGCAAT	-13	True	NA	17	True	TATAAA	-4	NA	144284926	144429711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580
transcript_161276.nic	chr6	+	958	8	NIC	ENSG00000152818.19	novel	597	6	NA	NA	-13	3353	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	13.844618788098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTGAAGAAGAGGCAAT	1	True	NA	17	True	TATAAA	-4	NA	144330806	144429711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_144331019_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580
transcript_161279.known	chr6	-	3129	4	FSM	ENSG00000112425.16	ENST00000367519.9	3129	4	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGTACAGGATTTTT	7	True	NA	-1	True	AATAAA	-15	NA	145735520	145625304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145735197
transcript_161280.known	chr6	-	2786	4	FSM	ENSG00000112425.16	ENST00000611340.5	2786	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.490737563232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCAAAATCACCCAAAAC	-5	True	NA	-49	True	AATAAA	-36	NA	145736023	145625352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145735995
transcript_161284.known	chr6	-	7596	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_29	18.0697551814812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGAATTCTTTGATTTC	-3	True	NA	NA	False	AATAAA	-21	NA	145964358	145884806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
transcript_161285.nic	chr6	-	2068	9	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	-38	58809	-4	1944	5prime_fragment	FALSE	canonical	3	39	junction_8	9.81070843517429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCATTTATCAATCCC	1	True	NA	NA	False	AGTAAA	-41	NA	145964427	145943615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_161291.nic	chr6	-	1827	8	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	16	60574	-15	179	5prime_fragment	FALSE	canonical	3	39	junction_7	10.4705612581764	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGAGCTTAAGTTCAG	-18	True	NA	NA	False	GATAAA	-13	NA	145964373	145945380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_161300.known	chr6	-	9051	3	FSM	ENSG00000118496.5	ENST00000237281.5	9051	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	19	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTATGCTTTTGTATT	-15	True	NA	NA	False	AATAAA	-16	NA	145814795	145793501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145800310_145804371_145806422_145814602
transcript_161306.known	chr6	+	1065	3	FSM	ENSG00000118508.5	ENST00000367495.4	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	13	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATGGTCATTTTGAGT	-11	True	NA	21	True	AATAAA	-13	NA	146543832	146554953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_146544122_146549463_146549742_146554455
transcript_161308.known	chr6	+	7460	20	FSM	ENSG00000111961.19	ENST00000367467.8	7460	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	9.22269872353816	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTTTTTTGTTGTTTC	-14	True	NA	14	True	AATAAA	-15	NA	148342837	148552044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_148343224_148390133_148390263_148440183_148440235_148440357_148440408_148468544_148468586_148471416_148471504_148474109_148474223_148487613_148487716_148514323_148514457_148519546_148519894_148525290_148525366_148527452_148527597_148531525_148531662_148532796_148532967_148533770_148533981_148534750_148534902_148540442_148540557_148543679_148544819_148546014_148546147_148548294
transcript_161309.known	chr6	+	4496	8	FSM	ENSG00000111962.8	ENST00000367463.5	4496	8	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	32.5739347406756	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGCATTCCTTAACTT	-16	True	NA	4	True	AATAAA	-17	NA	148747029	149076990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_148747678_148886985_148887030_148941278_148941435_148953871_148953952_148964409_148964564_149019138_149019237_149021323_149021482_149073832
transcript_161312.known	chr6	+	4363	7	FSM	ENSG00000055208.19	ENST00000637181.2	4363	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	8.95203266799719	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATTTTGTGACTTGTT	28	True	NA	14	True	ATTAAA	-16	NA	149317711	149411607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149318016_149369908_149370100_149378017_149379519_149397603_149397765_149397968_149398063_149399103_149399185_149409576
transcript_161313.known	chr6	-	2475	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	37.0828651655841	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTAGTTTTTTTTTC	-18	True	NA	NA	False	NA	NA	NA	149546043	149504494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_161319.nic	chr6	-	1195	12	ISM	ENSG00000131013.4	ENST00000253329.3	2475	13	8	7722	8	-6942	5prime_fragment	FALSE	canonical	3	321	junction_2	38.4094943496832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCACTGTTCTGAAGAG	-10	True	NA	NA	False	AGTAAA	-17	NA	149546035	149512216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_16132.known	chr1	+	1686	13	FSM	ENSG00000143224.18	ENST00000352210.9	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	89.4029579426144	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-47	True	NA	10	True	AATAAA	-16	NA	161166409	161171218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_161320.known	chr6	+	1943	8	FSM	ENSG00000055211.14	ENST00000367419.10	1943	8	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	12.1873135778521	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	4	True	NA	28	True	AATAAA	-29	NA	149566374	149591748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580592_149580724_149582439_149582604_149590726
transcript_161330.known	chr6	+	2026	8	FSM	ENSG00000055211.14	ENST00000650599.1	2026	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_5	92.669040247583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	45	False	NA	28	True	AATAAA	-29	NA	149566293	149591748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580590_149580724_149582439_149582604_149590726
transcript_161331.nnic	chr6	-	2034	11	NNC	ENSG00000186625.14	novel	1898	11	NA	NA	191	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_10	48.5118542214169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	256	False	NA	-8	True	AATAAA	-23	NA	149648502	149594872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648120
transcript_161332.known	chr6	-	1898	11	FSM	ENSG00000186625.14	ENST00000367411.7	1898	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	19.7142080743813	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-4	True	NA	-8	True	AATAAA	-23	NA	149648714	149594872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_161337.known	chr6	-	2567	4	FSM	ENSG00000131023.13	ENST00000392273.7	2567	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	11.0855260988773	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGCATTTTATTTTAGT	8290	False	149718117	-12	True	AATAAA	-18	NA	149718105	149682918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149684593_149695073_149695222_149701778_149702267_149717848
transcript_161345.known	chr6	+	1938	8	FSM	ENSG00000120265.19	ENST00000367384.7	1938	8	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_7	353.97002063763	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	NA	False	NA	NA	False	AATAAA	-19	NA	149749442	149811420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802370_149810615
transcript_161347.known	chr6	+	1686	8	FSM	ENSG00000120265.19	ENST00000464889.7	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	469.535767258144	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	-12	True	NA	NA	False	AATAAA	-18	NA	149749740	149811419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_161350.known	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	23.279140176281	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-3	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
transcript_161354.known	chr6	+	1293	7	FSM	ENSG00000120265.19	ENST00000367378.6	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	1588	junction_4	99.3099804763963	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGTCTGCCCTTATTT	NA	False	NA	22	True	ATTAAA	-15	NA	149749443	149802530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199
transcript_161356.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000544496.5	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	690.55889200946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	NA	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_161359.known	chr6	-	3634	7	FSM	ENSG00000120256.11	ENST00000239367.7	3634	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	9.78803124001735	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGAGCTGTTACTGCA	23	False	149864372	37	True	AATATA	-18	NA	149864359	149818756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149820704_149826263_149826360_149836084_149836298_149837337_149837464_149842982_149843125_149853002_149853161_149863407
transcript_16136.known	chr1	+	1526	12	FSM	ENSG00000143224.18	ENST00000652182.1	1526	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	103.233587333382	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTAACAGCTGATCCC	5	True	NA	-48	True	NA	NA	NA	161166461	161171160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170619_161170770_161170906_161170950_161171033
transcript_161367.known	chr6	-	3158	4	FSM	ENSG00000120256.11	ENST00000367368.3	3158	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.0083324654586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAGTGGTGTGTGAAT	16	True	NA	-2	True	AATAAA	-15	NA	149864026	149840437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149842677_149842982_149843125_149853002_149853161_149863407
transcript_161371.known	chr6	-	3111	5	FSM	ENSG00000131019.11	ENST00000367339.7	3111	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.29903810567666	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGATTTCCATTTCCAT	1	True	NA	NA	False	ATTAAA	-19	NA	150069121	150061052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_150063352_150064584_150064714_150065397_150065674_150065898_150066163_150068978
transcript_161377.known	chr6	+	3475	28	FSM	ENSG00000120254.16	ENST00000611279.4	3475	28	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_20	76.4701363659691	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCAAGTTTTCAGTGC	-39	True	NA	18	True	AATAAA	-18	NA	150865678	151101885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
transcript_161378.known	chr6	+	3451	28	FSM	ENSG00000120254.16	ENST00000367321.8	3451	28	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_6	78.3192439828943	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAAGTTTTCAGTGCCA	-16	True	NA	20	True	AATAAA	-20	NA	150865701	151101887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
transcript_161379.nic	chr6	+	3323	28	NIC	ENSG00000120254.16	novel	1134	11	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	86.0617062574907	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAAGTTTTCAGTGCCA	478	False	NA	20	True	AATAAA	-20	NA	150866418	151101887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
transcript_161380.nic	chr6	+	3320	28	NIC	ENSG00000120254.16	novel	1134	11	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	87.5086043192553	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAAGTTTTCAGTGCCA	478	False	NA	20	True	AATAAA	-20	NA	150866418	151101887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
transcript_161399.nic	chr6	+	1084	8	NIC	ENSG00000120254.16	novel	1049	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	178	junction_7	111.286906283732	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	-34	True	NA	34	True	ATTAAA	-40	NA	150865683	150899021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150898859
transcript_161400.known	chr6	+	1049	8	FSM	ENSG00000120254.16	ENST00000367307.8	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_6	120.497099634838	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	-2	True	NA	34	True	ATTAAA	-40	NA	150865715	150899021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
transcript_161401.nic	chr6	+	935	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	153.792996310904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	478	False	NA	34	True	ATTAAA	-40	NA	150866418	150899021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150898859
transcript_161402.nic	chr6	+	932	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	158.949998555572	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	478	False	NA	34	True	ATTAAA	-40	NA	150866418	150899021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
transcript_161409.known	chr6	+	8466	5	FSM	ENSG00000131016.17	ENST00000402676.7	8466	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	162.684318543614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGATTCAGTTTC	-14	True	NA	39	True	AATAAA	-40	NA	151239966	151358559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151240060_151240383_151240725_151305746_151305904_151348710_151353753_151355726
transcript_161410.known	chr6	+	6597	4	FSM	ENSG00000131016.17	ENST00000253332.5	6597	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	78.8542960148653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTGGTTTTATTAG	-6	True	NA	15	True	AATAAA	-16	NA	151240373	151356773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151240725_151305746_151305904_151348710_151353753_151355726
transcript_161413.known	chr6	-	3103	3	FSM	ENSG00000181472.5	ENST00000325144.5	3103	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	4.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATGTCATCTCT	-3	True	NA	-14	True	AATAAA	-19	NA	151391559	151364114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151366893_151373464_151373650_151391419
transcript_161419.known	chr6	-	1948	12	FSM	ENSG00000155906.20	ENST00000444024.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_8	21.4734123514762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTATCTACATCACT	4	True	NA	-1	True	AATAAA	-16	NA	151452126	151404761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_161424.known	chr6	-	1340	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	56.8527923676577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-28	True	NA	-49	True	NA	NA	NA	151452158	151404883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
transcript_161426.known	chr6	-	915	2	FSM	ENSG00000155906.20	ENST00000643564.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAATTCTTCATCAAGT	4	True	NA	NA	False	AATAAA	-16	NA	151452074	151444969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151445826_151452015
transcript_161427.known	chr6	-	1871	13	FSM	ENSG00000155906.20	ENST00000684765.1	1871	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	72.0420401956771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAGACTCAGTCTCAAA	-16	True	NA	-71	True	NA	NA	NA	151452146	151404905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151418532_151418580_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_161428.known	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	58.0624663616695	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	-30	True	NA	17	True	AATAAA	-18	NA	151452465	151470101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
transcript_16143.nic	chr1	+	1677	12	NIC	ENSG00000143224.18	novel	1667	13	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_4	95.8339645445735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	4074	False	NA	10	True	AATAAA	-16	NA	161166365	161171218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_161430.known	chr6	+	712	4	FSM	ENSG00000146476.11	ENST00000494826.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	461.598189867431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGGATTTGAGCTTG	-10	True	NA	NA	False	AAAAAG	-32	NA	151452485	151468542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151452587_151458327_151458573_151464452_151464619_151468342
transcript_161432.known	chr6	+	5306	11	FSM	ENSG00000120262.10	ENST00000239374.8	5306	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.03315017762062	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTGTTGGATTTCCCT	-26	True	NA	NA	False	AATAAA	-28	NA	151494016	151621193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151494186_151536317_151536447_151538044_151538302_151544571_151544717_151548303_151548490_151573173_151573492_151585888_151586090_151593106_151593281_151596334_151596578_151615442_151615680_151617946
transcript_161437.known	chr6	-	3700	7	FSM	ENSG00000112031.16	ENST00000367233.10	3700	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	48.9341961776788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-7	True	NA	-108	True	AATAAA	-33	NA	153002709	152987361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_161439.known	chr6	-	3651	7	FSM	ENSG00000112031.16	ENST00000464135.5	3651	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	60.2570881031159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_161441.nic	chr6	-	2463	7	NIC	ENSG00000112031.16	novel	3700	7	NA	NA	-25	-1154	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	70.5305292448281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACCCAGTAGCTAGGC	-32	True	NA	NA	False	NA	NA	NA	153002734	152988515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995243_152995320_152998549_152998630_153002426
transcript_161442.nic	chr6	-	2641	7	NIC	ENSG00000112031.16	novel	3651	7	NA	NA	-25	-1154	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	83.0334604575502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACCCAGTAGCTAGGC	-32	True	NA	NA	False	NA	NA	NA	153002734	152988515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_152990096_152991184_152991417_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_161447.known	chr6	-	3514	6	FSM	ENSG00000112031.16	ENST00000485512.5	3514	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	81.6612515211468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_161448.known	chr6	-	3539	6	FSM	ENSG00000112031.16	ENST00000367231.9	3539	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	73.4177090353547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_161449.known	chr6	-	3431	6	FSM	ENSG00000112031.16	ENST00000367230.5	3431	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	87.130706412837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995243_152995320_152998549_152998630_153002426
transcript_161453.known	chr6	-	2054	5	FSM	ENSG00000112029.10	ENST00000229758.8	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	27.8242250565941	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGCTTAATGTATACC	4	True	NA	NA	False	AATAAA	-16	NA	152983041	152970534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152982856
transcript_161454.known	chr6	-	2221	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	145.53070981755	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAATGTATACCTTTTAT	1	True	NA	NA	False	AATAAA	-22	NA	152983579	152970528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
transcript_161457.known	chr6	+	1478	3	FSM	ENSG00000227627.4	ENST00000654706.2	1512	3	33	1	7	-1	multi-exon	FALSE	canonical	3	8	junction_1	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCGTCTTGTTTATTCT	4	True	NA	2	True	CATAAA	-14	NA	152983725	152990006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_152983806_152987955_152988023_152988675
transcript_161458.nic	chr6	-	718	2	ISM	ENSG00000112029.10	ENST00000229758.8	2054	5	-16	4570	-16	-4570	5prime_fragment	FALSE	canonical	3	339	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGCAAAACGAAATCCTA	-12	True	NA	-12	True	ATTAAA	-4	NA	152983057	152975104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_152975622_152982856
transcript_161459.known	chr6	-	447	2	FSM	ENSG00000112031.16	ENST00000482526.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGGTCCTGTTTTC	251	False	NA	NA	False	AATAAA	-20	NA	153002536	152998292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152998630_153002426
transcript_161462.known	chr6	-	7932	5	FSM	ENSG00000091844.8	ENST00000206262.2	7932	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	4.81534007106456	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGAAAGTTACTGTTT	-23	True	NA	-8	True	AATAAA	-16	NA	153131282	153004458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131123
transcript_161464.known	chr6	-	447	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGCATGGAGGGAGTTTC	19	False	NA	-51	True	NA	NA	NA	153282733	153282286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_153282300_153282700
transcript_161465.known	chr6	-	21078	13	FSM	ENSG00000153721.19	ENST00000607772.6	21078	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5.14983818516013	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTGCAGCAAAATGC	-2	True	NA	-13	True	AATAAA	-15	NA	154510685	154387514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_154406653_154410342_154410433_154410933_154411143_154414298_154414424_154422505_154422653_154422914_154422984_154428127_154428188_154430471_154430592_154433465_154433508_154441291_154441380_154442087_154442291_154450094_154450259_154510062
transcript_161469.known	chr6	+	5127	20	FSM	ENSG00000213079.10	ENST00000367178.8	5127	20	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_2	17.3139496702975	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTATAATATCTGTG	4	True	NA	NA	False	TATAAA	-19	NA	154733415	154834221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_154733931_154773988_154774073_154778000_154778046_154787860_154788023_154792822_154792977_154795008_154795140_154801970_154802148_154803543_154803624_154805368_154805487_154808069_154808202_154808685_154808799_154810014_154810209_154815715_154815817_154818478_154818593_154820176_154820334_154822275_154822410_154824233_154824379_154827171_154827241_154830921_154831141_154831938
transcript_161472.known	chr6	+	6094	27	FSM	ENSG00000146426.19	ENST00000682666.1	6094	27	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	9.52853081058586	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCATTGGCATTTGTA	21	True	NA	77	True	AGTAAA	-17	NA	154995314	155257723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_154995493_155090288_155090380_155127489_155127601_155129217_155130418_155137176_155137613_155144605_155144779_155148109_155148335_155164414_155164601_155165262_155165410_155176815_155176978_155179038_155179144_155179377_155179457_155182225_155182319_155183236_155183501_155211203_155211308_155240529_155240710_155244010_155244080_155244657_155244784_155245622_155245732_155247999_155248180_155249850_155249970_155250912_155251022_155251944_155252004_155252947_155253054_155253972_155254061_155254418_155254574_155256483
transcript_161475.known	chr6	+	3275	21	FSM	ENSG00000146426.19	ENST00000456877.6	3275	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.7626305625051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACTGTTCATT	887	False	NA	NA	False	TTTAAA	-33	NA	155149108	155257200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_155149227_155164414_155164601_155165262_155165410_155176815_155176978_155179038_155179144_155179377_155179457_155182225_155182319_155183236_155183501_155211203_155211308_155240529_155240710_155244010_155244080_155244657_155244784_155245622_155245732_155247999_155248180_155249850_155249970_155250912_155251022_155251944_155252004_155252947_155253054_155253972_155254061_155254418_155254574_155256483
transcript_161477.nic	chr6	-	1166	7	NIC	ENSG00000029639.11	novel	2799	7	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	213.977932403217	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	148	False	NA	NA	False	AATAAA	-26	NA	155314544	155257652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_161478.known	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_4	40.0946796138008	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-5	True	NA	-2	True	AATAAA	-20	NA	155314484	155256133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_161483.nic	chr6	-	910	6	ISM	ENSG00000029639.11	ENST00000367166.5	2799	7	-60	4139	-51	550	5prime_fragment	FALSE	canonical	3	564	junction_3	40.3316253081871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATGCCTTTTCTTCT	148	False	NA	NA	False	NA	NA	NA	155314544	155260272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_161487.nic	chr6	-	2042	5	ISM	ENSG00000029639.11	ENST00000367166.5	2799	7	-5	27709	4	13118	5prime_fragment	FALSE	canonical	3	564	junction_2	38.6999677002449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACCATGTAGCTTGA	-10	True	NA	NA	False	AATAAA	-10	NA	155314489	155283842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_161489.known	chr6	-	433	3	FSM	ENSG00000029639.11	ENST00000470239.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAGATACAGTACAA	-5	True	NA	NA	False	AATAAA	-6	NA	155314484	155257672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_155257909_155311331_155311340_155314295
transcript_161490.known	chr6	-	4322	4	FSM	ENSG00000215712.11	ENST00000400788.9	4322	4	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	8.64098759787715	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATAAAGCTCATTCTT	1	True	NA	NA	False	ATTAAA	-15	NA	157323519	157289024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_157293000_157318781_157318920_157322704_157322806_157323411
transcript_161496.known	chr6	+	3978	19	FSM	ENSG00000130340.17	ENST00000681651.1	3978	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	91.9021218471043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAATTCTCAAAGCACT	-9	True	NA	5	True	AATAAA	-19	NA	157823221	157944505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157876168_157876479_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_161498.known	chr6	+	4216	18	FSM	ENSG00000130340.17	ENST00000392185.8	4216	18	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_6	21.4418018144909	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTCAGTATTTGGA	15	True	NA	NA	False	AATATA	-5	NA	157823245	157945077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_1615.known	chr1	-	569	3	FSM	ENSG00000162585.17	ENST00000378543.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	643	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-7	True	NA	-14	True	ATTAAA	-40	NA	2194750	2189547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2189782_2193638_2193911_2194687
transcript_161504.known	chr6	+	3634	18	FSM	ENSG00000130340.17	ENST00000680078.1	3634	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	70.8502001765126	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGTAAATTCTCAAAG	-9	True	NA	1	True	AATAAA	-15	NA	157823221	157944501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901927_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_161505.known	chr6	+	3434	18	FSM	ENSG00000130340.17	ENST00000681183.1	3434	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	70.0797370869284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCGTAATGGGAGTGATAT	-10	True	NA	NA	False	AATAAA	-12	NA	157823220	157942738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157941258
transcript_161506.known	chr6	+	3180	14	FSM	ENSG00000130340.17	ENST00000679790.1	3180	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	79.656436833404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGTAAATTCTCAAAG	15	True	NA	1	True	AATAAA	-15	NA	157823245	157944501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_161508.known	chr6	+	3959	27	FSM	ENSG00000078269.15	ENST00000640338.1	3959	27	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_26	13.0710394003659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCGGCTTCACTCTT	10	False	NA	NA	False	NA	NA	NA	157981953	158094094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157982089_158017203_158017291_158028755_158029027_158033454_158033681_158043315_158043400_158054966_158055029_158059256_158059354_158061991_158062165_158063790_158063873_158064600_158064751_158064825_158064992_158066443_158066636_158068646_158068729_158069532_158069674_158071601_158071795_158074579_158074739_158076625_158076783_158078163_158078282_158081108_158081328_158081431_158081511_158083428_158083598_158084000_158084175_158086854_158086990_158088659_158088773_158089838_158089948_158092925_158093105_158093887
transcript_161510.known	chr6	+	7402	27	FSM	ENSG00000078269.15	ENST00000355585.9	7402	27	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_23	9.72103496084955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTATTTCTTTTCAG	-2	True	NA	24	True	ATTAAA	-21	NA	157981862	158099176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157982089_158017203_158017291_158028755_158029027_158033454_158033681_158043315_158043400_158054966_158055029_158059256_158059354_158061991_158062165_158063790_158063873_158064600_158064751_158064825_158064992_158066443_158066636_158068646_158068729_158069532_158069674_158071601_158071795_158074579_158074739_158076625_158076783_158078163_158078282_158081108_158081328_158081431_158081511_158083428_158083598_158084000_158084175_158086854_158086990_158088659_158088773_158089838_158089948_158092925_158093105_158095617
transcript_161520.nic	chr6	+	2754	12	ISM	ENSG00000078269.15	ENST00000640338.1	3959	27	-130	26560	-39	3662	5prime_fragment	TRUE	canonical	3	47	junction_7	11.6249944459242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGACTCGGGCCTTGGT	238	False	NA	2	True	AATAAA	-18	NA	157981823	158067534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_157982089_158017203_158017291_158028755_158029027_158033454_158033681_158043315_158043400_158054966_158055029_158059256_158059354_158061991_158062165_158063790_158063873_158064600_158064751_158064825_158064992_158066443
transcript_161526.known	chr6	+	939	4	FSM	ENSG00000078269.15	ENST00000367113.5	939	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	32.8937684067971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGATCTCATTAAAAATG	94	False	NA	NA	False	AATAAA	-36	NA	157982037	158030937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157982089_158017203_158017291_158028755_158029027_158030407
transcript_161528.known	chr6	-	3936	17	FSM	ENSG00000122335.17	ENST00000647468.2	3936	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.8262155823408	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTTCATTGTACAA	-5	True	NA	-21	True	AATAAA	-15	NA	158168262	158109518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_161533.known	chr6	-	2022	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	9.46017430913319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGCATTGTAATAATT	-23	True	NA	NA	False	NA	NA	NA	158168280	158114592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_161534.known	chr6	-	3633	14	FSM	ENSG00000122335.17	ENST00000646208.1	3633	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	25.2773959410801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAACTCGATATCAAC	12	True	NA	-43	True	NA	NA	NA	158168245	158109540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158158272_158158365_158168139
transcript_161536.known	chr6	-	1993	14	FSM	ENSG00000122335.17	ENST00000646562.1	1993	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	21.8298964426821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAATGTTTTGCTTTTA	27	True	NA	NA	False	NA	NA	NA	158168230	158114534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158158272_158158365_158168139
transcript_161537.known	chr6	+	1102	4	FSM	ENSG00000272047.4	ENST00000648328.1	1102	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	308.063124844388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAACAGAGAGACCCTG	-6	True	NA	NA	False	AAAACA	-17	NA	158168349	158192881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158168396_158170469_158170539_158187039_158187122_158191976
transcript_161539.known	chr6	+	7483	3	FSM	ENSG00000272047.4	ENST00000607778.2	7483	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	110.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCACAGCCTGTTTT	-6	True	NA	NA	False	AATAAA	-17	NA	158168349	158199344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158168396_158170469_158170539_158191976
transcript_161541.known	chr6	+	680	2	FSM	ENSG00000130338.13	ENST00000620026.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATTTATTATTCCCC	-3	True	NA	NA	False	AATGAA	-40	NA	158232235	158312662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158232304_158312050
transcript_161543.known	chr6	+	5390	17	FSM	ENSG00000146433.10	ENST00000367090.4	5390	17	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	22.6187836764049	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTATGTGTCTTGATTT	28	False	NA	17	True	AATAAA	-13	NA	158536435	158635428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158536866_158573419_158573524_158580939_158580996_158583953_158584045_158585303_158585426_158589671_158589783_158605266_158605348_158607243_158607344_158608332_158608464_158608658_158608751_158623549_158623608_158625103_158625207_158625702_158625755_158628407_158628491_158629729_158629820_158631322_158631390_158631809
transcript_161546.known	chr6	-	730	5	FSM	ENSG00000146425.11	ENST00000367089.8	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	1709	junction_4	137.823256382949	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-7	True	NA	-3	True	AATAAA	-16	NA	158644743	158636473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
transcript_161547.nnic	chr6	-	723	4	NIC	ENSG00000146425.11	novel	730	5	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	118	junction_3	888.02064540565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	8943	False	NA	-3	True	AATAAA	-16	NA	158644778	158636473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_158636898_158637127_158637206_158637770_158637895_158644681
transcript_161560.known	chr6	-	3052	14	FSM	ENSG00000092820.19	ENST00000367075.4	3052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1096.46204034484	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCACGGGTGTGTG	0	True	NA	-10	True	AATAAA	-16	NA	158819368	158765747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_161597.nic	chr6	-	1140	10	ISM	ENSG00000092820.19	ENST00000367075.4	3052	14	-30	5121	-30	-5121	5prime_fragment	FALSE	canonical	0	0	junction_6	1301.43209817986	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAAACCGTGGAGAGA	NA	False	NA	-44	True	AAGAAA	-2	NA	158819398	158770868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_161606.nic	chr6	-	842	7	ISM	ENSG00000092820.19	ENST00000367075.4	3052	14	-33	17786	-33	0	5prime_fragment	FALSE	canonical	0	0	junction_3	1592.116585625	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGATGATAAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	158819401	158783533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_161612.known	chr6	-	3068	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1135.84684511406	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGGTGTGTGCTTGTGT	6	True	NA	-3	True	AATAAA	-23	NA	158818227	158765740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
transcript_161613.known	chr6	+	1020	4	FSM	ENSG00000203711.15	ENST00000658761.1	1020	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTGCTTTGCAAGGA	15	False	NA	NA	False	AATAAA	-16	NA	158869909	158910347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158870311_158873529_158873622_158895220_158895367_158909966
transcript_161614.known	chr6	+	735	4	FSM	ENSG00000203711.15	ENST00000659187.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTTTGCAAGGAAGC	39	False	NA	NA	False	AATAAA	-19	NA	158869854	158910350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158869966_158873527_158873622_158895220_158895367_158909966
transcript_161616.known	chr6	-	6576	8	FSM	ENSG00000130363.13	ENST00000367069.7	6576	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	4.89481191400338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTCTGTTTTTCATAA	-4	True	NA	-2	True	AATAAA	-17	NA	159000202	158972870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158977849_158978259_158978347_158980773_158980937_158982484_158982689_158983661_158983808_158986279_158986422_158993838_158993927_158999434
transcript_161620.known	chr6	-	1904	6	FSM	ENSG00000130363.13	ENST00000449822.5	1904	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.1390334845093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	13	True	NA	NA	False	NA	NA	NA	158999781	158976833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158977849_158978259_158978347_158980773_158980937_158982484_158982689_158993838_158993927_158999434
transcript_161629.known	chr6	-	2352	12	FSM	ENSG00000120438.12	ENST00000321394.12	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	2104	junction_11	137.741103415966	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTATCTTACCTCG	-7	True	NA	-14	True	AATAAA	-23	NA	159789602	159778497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159788057_159788144_159789404
transcript_161636.known	chr6	-	1878	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	696.894224398509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTACACATTAAAGTAA	NA	False	NA	-73	True	NA	NA	NA	159789703	159778986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
transcript_161642.known	chr6	+	1520	9	FSM	ENSG00000120437.9	ENST00000367048.5	1520	9	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_5	177.607669809049	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTAATTTAATAAGATCA	13	True	NA	-23	True	NA	NA	NA	159762044	159779112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159762143_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
transcript_161649.nic	chr6	+	1652	9	NIC	ENSG00000120437.9	novel	856	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	678.183004431695	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTAAGGGCTCCAGAG	6	True	NA	14	True	AATAAA	-15	NA	159762481	159779046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_159762778_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
transcript_161652.known	chr6	+	3656	8	FSM	ENSG00000146457.16	ENST00000358372.8	3656	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	218.044369197591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	8545	False	NA	15	True	AATAAA	-23	NA	159725584	159756319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_161653.known	chr6	+	2105	8	FSM	ENSG00000146457.16	ENST00000621533.5	2105	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	195.839167665298	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	-13	True	NA	15	True	AATAAA	-23	NA	159727505	159756319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_161655.known	chr6	+	1623	7	FSM	ENSG00000146457.16	ENST00000614346.4	1623	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	217.154834673839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTGGTTTTTTTTTT	1	True	NA	13	True	ATTAAA	-15	NA	159726997	159749416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_161657.known	chr6	+	1430	7	FSM	ENSG00000146457.16	ENST00000631126.2	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	179.882755025476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTTTTTTTTTTT	-6	True	NA	18	True	ATTAAA	-20	NA	159727565	159749421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_161661.known	chr6	+	3280	8	FSM	ENSG00000146457.16	ENST00000650096.1	3280	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	232.450301908048	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGGTTTTTTTTTG	-1	True	NA	NA	False	NA	NA	NA	159726995	159755713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159750011_159753459_159753615_159755027
transcript_161662.known	chr6	+	1622	6	FSM	ENSG00000146457.16	ENST00000337387.4	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	51.6503630190534	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATAGTTGGTTTTTTTTT	16	False	NA	12	True	ATTAAA	-14	NA	159727587	159749415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190
transcript_161663.known	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	156.641501524979	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	8	True	NA	43	True	TTTAAA	-16	NA	159693234	159679063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_161669.known	chr6	-	815	5	FSM	ENSG00000112096.19	ENST00000367054.6	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	217.492959656169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGCATTATGCTTGC	1207	False	NA	-9	True	AATAAA	-21	NA	159693228	159679115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159692660_159692864_159693144
transcript_161670.known	chr6	-	14167	5	FSM	ENSG00000112096.19	ENST00000538183.7	14167	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	26.042033330752	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTTACTTCTTGA	1	True	NA	NA	False	AATAAA	-14	NA	159693241	159669068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_161680.known	chr6	-	991	4	FSM	ENSG00000112096.19	ENST00000337404.8	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	221.956452185258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTTATAGAAAA	1157	False	NA	NA	False	NA	NA	NA	159693278	159682164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159682639_159684853_159685034_159692660_159692864_159693144
transcript_161684.known	chr6	-	2045	2	FSM	ENSG00000112096.19	ENST00000452684.2	2045	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGACTTTTATTATTA	-2	True	NA	NA	False	NA	NA	NA	159693244	159690918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159692864_159693144
transcript_161685.known	chr6	-	1718	2	FSM	ENSG00000285427.1	ENST00000535372.1	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGACATATTGAAACCAAA	NA	False	NA	NA	False	AATAAA	-26	NA	159762332	159760257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159761637_159761993
transcript_161688.known	chr6	+	758	4	FSM	ENSG00000112110.10	ENST00000476826.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	387.439744419123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTGGGCTTCAGAAGC	-5	True	NA	-96	True	TTTAAA	-21	NA	159789811	159798313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159789889_159790939_159791127_159797286_159797519_159798051
transcript_161691.nnic	chr6	+	1043	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	223	junction_1	315.827308649662	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	-2	True	NA	20	True	AATAAA	-20	NA	159789814	159798429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
transcript_161692.nnic	chr6	+	823	4	NNC	ENSG00000112110.10	novel	970	4	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	369.928221265814	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTGGTTATATGAC	1	True	NA	17	True	AATAAA	-17	NA	159790439	159798426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_159790640_159790939_159791127_159797286_159797348_159798051
transcript_161694.known	chr6	+	970	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	122.901044204948	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	-18	True	NA	20	True	AATAAA	-20	NA	159790466	159798429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
transcript_161696.known	chr6	+	3234	11	FSM	ENSG00000146477.6	ENST00000275300.3	3234	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	5.58659108938537	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACATTTGCCCTTTCTCT	2	True	NA	18	True	ATTAAA	-19	NA	160348377	160452577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160348849_160397978_160398083_160407040_160407196_160408752_160408922_160410728_160410847_160436779_160436878_160436996_160437212_160442760_160442870_160443629_160443743_160447718_160447819_160450995
transcript_161706.nnic	chr6	+	1162	3	NNC	ENSG00000220913.1	novel	489	3	NA	NA	-22483	-7309	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	6	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCCAGATCTTCCAATC	-1	True	NA	13	True	AGTAAA	-14	NA	160883286	160906329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_160883784_160898548_160898654_160905769
transcript_161710.nnic	chr6	+	1188	3	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_2	134	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGTTTTCATTTGTAA	NA	False	NA	NA	False	AAAAAG	-20	NA	160883267	160888233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_+_160883784_160886516_160886701_160887745
transcript_161713.nnic	chr6	+	2233	2	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	316	junction_1	0	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGTTTTCATTTGTAA	NA	False	NA	NA	False	AAAAAG	-20	NA	160883267	160888233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_+_160883784_160886516
transcript_161716.known	chr6	+	5444	28	FSM	ENSG00000085511.20	ENST00000544041.5	5444	28	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_22	45.138773978961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGCAAAAGGCTGATTA	67	False	NA	-47	True	NA	NA	NA	160991843	161117308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093852_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161108950_161109042_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_161718.known	chr6	+	5445	27	FSM	ENSG00000085511.20	ENST00000366920.6	5445	27	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_15	21.3864484549163	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATATTGTCTTTTAA	37	False	NA	27	True	AATAAA	-20	NA	160991813	161117382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093840_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_161719.known	chr6	+	5500	27	FSM	ENSG00000085511.20	ENST00000392142.9	5500	27	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	27.1253118761554	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTTATATTGTCTTTT	-8	True	NA	25	True	AATAAA	-18	NA	160991768	161117380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093852_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_161720.known	chr6	+	5397	26	FSM	ENSG00000085511.20	ENST00000366919.6	5397	26	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	39.4272190244252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATATTGTCTTTTAATGG	38	False	NA	30	True	AATAAA	-23	NA	160991726	161117385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093852_161097079_161097177_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_161729.nic	chr6	-	1793	9	NIC	ENSG00000026652.15	novel	7923	9	NA	NA	-14	-6098	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	42.3392179308971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGTGGTGTATGTTGA	-14	True	NA	-5	True	ATTAAA	-14	NA	161274075	161136076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149256_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
transcript_161730.nnic	chr6	-	1792	9	NNC	ENSG00000026652.15	novel	7923	9	NA	NA	164	-6098	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	41.0182886039874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGTGGTGTATGTTGA	361	False	NA	-5	True	ATTAAA	-14	NA	161273799	161136076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273696
transcript_161732.known	chr6	-	7923	9	FSM	ENSG00000026652.15	ENST00000320285.9	7923	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	18.9270804668866	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTCTCTACACTGCCT	0	True	NA	5	True	AATAAA	-28	NA	161274061	161129966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
transcript_161734.known	chr6	-	7705	8	FSM	ENSG00000026652.15	ENST00000366911.9	7705	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	46.4942392744981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAAAAATGCACGTC	-4	True	NA	-7	True	AATAAA	-16	NA	161274025	161129978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161232035_161232303_161273937
transcript_161744.known	chr6	-	6072	4	FSM	ENSG00000026652.15	ENST00000624499.2	6072	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	61.0810026840497	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGTGTGGTGGCAG	197	False	NA	NA	False	AATACA	-29	NA	161273963	161160104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161165714_161166247_161166418_161232035_161232303_161273937
transcript_161745.known	chr6	-	942	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGACATCACCTCTGC	128	False	NA	NA	False	NA	NA	NA	161274032	161165837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161166418_161232035_161232303_161273937
transcript_161746.known	chr6	-	896	1	FSM	ENSG00000270419.1	ENST00000604200.1	896	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGGCCATCGTGAGA	2239	False	NA	-3	True	ATTAAA	-22	NA	163413960	163413064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_163413100_163414000
transcript_161752.known	chr6	+	9384	8	FSM	ENSG00000112531.17	ENST00000361752.8	9384	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	54.5407542810972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCTAGATTTCTAGAT	3	True	NA	NA	False	ATTAAA	-20	NA	163414717	163578592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
transcript_161756.known	chr6	-	2230	8	FSM	ENSG00000164458.10	ENST00000366876.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.35606035749581	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTCGTCCAGTTATTA	2	True	NA	NA	False	AATAAA	-15	NA	166167851	166157655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166158589_166160836_166160967_166162446_166162624_166164604_166164667_166164799_166164862_166165705_166165841_166166591_166166857_166167385
transcript_161762.known	chr6	-	659	9	FSM	ENSG00000198818.10	ENST00000478705.5	659	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_8	495.676557847958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCCCATAAAACACTC	-21	True	NA	NA	False	NA	NA	NA	166342576	166320155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_161768.known	chr6	-	1033	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	1106	junction_4	69.4353318284175	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTGAATCAAATTTA	10	True	NA	-13	True	AATAAA	-20	NA	166342545	166319727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
transcript_161775.known	chr6	-	2576	8	FSM	ENSG00000198818.10	ENST00000487841.5	2576	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_7	518.075953772756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATTTTTAAGATTT	8	True	NA	NA	False	ATTAAA	-20	NA	166342547	166319859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166320257_166322856_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_161782.known	chr6	+	3871	2	FSM	ENSG00000286760.2	ENST00000659081.2	3910	2	39	0	20	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAATTATGTGGTGCTGA	15	True	NA	NA	False	AATAAA	-15	NA	166342664	166351466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_166343148_166348078
transcript_161785.known	chr6	-	976	4	FSM	ENSG00000060762.19	ENST00000341756.10	976	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	85.8409381744321	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-1	True	NA	NA	False	AATAAA	-21	NA	166383013	166364918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366895_166382805
transcript_161786.known	chr6	-	1192	5	FSM	ENSG00000060762.19	ENST00000621685.4	1192	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	88.9982443647064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-1	True	NA	NA	False	AATAAA	-21	NA	166383013	166364918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366892_166366968_166367188_166382805
transcript_161787.known	chr6	+	1636	1	FSM	ENSG00000261420.1	ENST00000568025.1	1636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTTATTTTCAAGAAA	5	True	NA	NA	False	AATAAA	-29	NA	166383188	166384824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_166383200_166384800
transcript_161794.known	chr6	-	5832	21	FSM	ENSG00000071242.12	ENST00000265678.9	5832	21	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_8	20.2125579776534	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGACTTTCTGTGTTG	-1	True	NA	2	True	AATAAA	-43	NA	166627251	166409363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166412888_166413793_166413932_166418224_166418343_166419881_166419959_166423255_166423418_166430452_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166626920
transcript_161801.nnic	chr6	-	3880	20	NIC	ENSG00000071242.12	novel	5832	21	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_19	28.7417578213177	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAGAA	NA	False	NA	-109	True	NA	NA	NA	166627284	166411231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_166412888_166413793_166413932_166418224_166418343_166419881_166419959_166423255_166423418_166430452_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166626920
transcript_161810.nic	chr6	-	2367	16	ISM	ENSG00000071242.12	ENST00000265678.9	5832	21	-53	20588	-53	9937	5prime_fragment	FALSE	canonical	3	84	junction_3	21.8149795629823	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTCCCTCTGCCCA	NA	False	NA	NA	False	AAAAAG	-11	NA	166627304	166429951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166626920
transcript_161822.nic	chr6	-	1771	11	ISM	ENSG00000071242.12	ENST00000265678.9	5832	21	-53	59963	-53	6399	5prime_fragment	FALSE	canonical	3	84	junction_1	21.4979068748564	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGTGCCGAGTTGTTGG	NA	False	NA	NA	False	TTTAAA	-16	NA	166627304	166469326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166626920
transcript_161829.known	chr6	-	1417	10	FSM	ENSG00000026297.17	ENST00000366855.10	1417	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	131.417438758623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTATTTTGCTGTTT	2765	False	NA	NA	False	AAAACA	-14	NA	166956611	166929503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166955494_166955628_166956096
transcript_161832.known	chr6	-	1220	9	FSM	ENSG00000026297.17	ENST00000028008.9	1220	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	95.592805037827	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAACTGCAGCTTTCT	-1	True	NA	NA	False	AAAAAG	-10	NA	166956584	166929544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096
transcript_161835.known	chr6	-	2234	8	FSM	ENSG00000026297.17	ENST00000611959.2	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	73.1333699204294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCATATTGTCAGC	-18	True	NA	NA	False	NA	NA	NA	166956601	166928487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166956096
transcript_161838.known	chr6	-	1961	7	FSM	ENSG00000026297.17	ENST00000620173.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	106.723031982584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATCCTTAGAATA	2976	False	NA	NA	False	AATAGA	-37	NA	166956400	166928501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166952487_166952549_166956096
transcript_161840.known	chr6	-	2536	5	FSM	ENSG00000026297.17	ENST00000683770.1	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	128.244639264181	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGACAAGATCTGATTTG	-3	True	NA	NA	False	NA	NA	NA	166956473	166927867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166956096
transcript_161843.known	chr6	+	13956	13	FSM	ENSG00000213066.13	ENST00000366847.9	13956	13	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	76.0333899605225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGCGATCTTT	17	True	NA	13	True	AATAAA	-19	NA	166999396	167052718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_161849.known	chr6	+	1484	12	FSM	ENSG00000213066.13	ENST00000349556.4	1484	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	71.5203259555868	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	28	True	NA	26	True	AATAAA	-18	NA	166999407	167040317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_161859.nnic	chr6	+	992	5	NNC	ENSG00000280707.3	novel	629	4	NA	NA	-240	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	218.660124394001	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	NA	False	NA	21	True	AATAAA	-16	NA	167227959	167237511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478_167232561_167237240
transcript_161864.known	chr6	+	674	4	FSM	ENSG00000280707.3	ENST00000625787.3	980	4	25	281	7	-281	multi-exon	FALSE	canonical	3	71	junction_3	341.297849718134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGCTATTTTGCCGA	13	True	NA	NA	False	NA	NA	NA	167228306	167233645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233242
transcript_161867.nnic	chr6	+	3373	4	NNC	ENSG00000280707.3	novel	629	4	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	349.388354445626	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTTGTTCTTTTTGTT	-1	True	NA	22	True	AATAAA	-17	NA	167228232	167237512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_167228398_167231859_167231958_167232478_167232561_167234484
transcript_161869.nic	chr6	+	642	4	FSM	ENSG00000280707.3	ENST00000691081.1	629	4	-19	6	7	0	multi-exon	FALSE	canonical	3	322	junction_3	231.445217900239	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	NA	False	NA	21	True	AATAAA	-16	NA	167228206	167237511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167237240
transcript_161876.known	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	255.565168901311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	6	True	NA	21	True	AATAAA	-16	NA	167228299	167237511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
transcript_161881.nnic	chr6	+	3288	3	NNC	ENSG00000280707.3	novel	573	3	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	423	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGAGTTTGTTCTTTTT	-1	True	NA	19	True	AATAAA	-14	NA	167228232	167237509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_167228398_167231859_167231958_167234484
transcript_161882.known	chr6	+	403	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	164	6	64	0	multi-exon	FALSE	canonical	3	195	junction_2	346.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	25	False	NA	21	True	AATAAA	-16	NA	167228363	167237511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231859_167231958_167237240
transcript_161886.nic	chr6	+	2239	2	ISM	ENSG00000280707.3	ENST00000625787.3	980	4	-56	0	0	0	intron_retention	FALSE	canonical	3	888	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACAGTACAGCATGTT	-8	True	NA	2	True	ATTAAA	-7	NA	167228225	167233926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_167228398_167231859
transcript_161892.known	chr6	-	1639	3	FSM	ENSG00000198221.11	ENST00000663809.2	1660	3	21	0	3	0	multi-exon	FALSE	canonical	3	5	junction_2	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAATATGAGGACAGA	NA	False	NA	NA	False	AAAAAG	-16	NA	167826812	167823341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_167824807_167825402_167825551_167826786
transcript_161893.known	chr6	-	4011	2	FSM	ENSG00000198221.11	ENST00000669546.3	4090	2	79	0	78	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAACCTCTTTTCTTTAT	80	False	NA	NA	False	NA	NA	NA	167826709	167822102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_167824807_167825402
transcript_161894.known	chr6	+	963	6	FSM	ENSG00000130396.21	ENST00000400825.8	963	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	57.4268230011029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATGCAGATAGTTTAA	21	True	NA	NA	False	NA	NA	NA	167826921	167880372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167827238_167864550_167864747_167870382_167870499_167872216_167872378_167875334_167875496_167880359
transcript_161898.nic	chr6	+	762	4	NIC	ENSG00000130396.21	novel	5962	33	NA	NA	-47	-3174	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	49.3851079667635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCATTGCGACAGGCATC	650	False	NA	NA	False	AAAAAG	-13	NA	167827587	167872321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_167827933_167864550_167864747_167870385_167870499_167872213
transcript_1619.known	chr1	-	4478	2	FSM	ENSG00000162585.17	ENST00000497675.2	4478	2	0	0	0	0	multi-exon	FALSE	canonical	3	1193	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTTCTTTCTGACG	954	False	NA	-10	True	ATTAAA	-44	NA	2194108	2189543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2193911_2193997
transcript_161905.known	chr6	-	2997	4	FSM	ENSG00000164488.12	ENST00000366795.4	2997	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	3.85861230093008	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCTCCCTGATTCCT	-3	True	NA	-7	True	AATAAA	-27	NA	168319777	168306903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_168309099_168310167_168310447_168311151_168311285_168319387
transcript_161907.known	chr6	-	2559	2	FSM	ENSG00000224417.2	ENST00000445442.2	2559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTTCACTCAATAT	NA	False	NA	2	True	AATAAA	-18	NA	168302114	168298068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_168300590_168302076
transcript_161909.known	chr6	+	3150	13	FSM	ENSG00000112562.20	ENST00000354536.9	3150	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	21.9928965804871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTTTTTTCCAG	-2	True	NA	10	True	AATAAA	-20	NA	168441150	168667994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_168441455_168509914_168510087_168526345_168526453_168527627_168527728_168543624_168543673_168547085_168547170_168549128_168549204_168598817_168599005_168608156_168608240_168650680_168650784_168652953_168653229_168664073_168664112_168666420
transcript_161911.known	chr6	+	3082	13	FSM	ENSG00000112562.20	ENST00000356284.7	3082	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	10.7108460087064	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTCTTTTTTTTTTCC	0	True	NA	8	True	AATAAA	-18	NA	168441183	168667992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_168441455_168509914_168510087_168526345_168526453_168527627_168527728_168543624_168543673_168547118_168547170_168549128_168549204_168598817_168599005_168608156_168608240_168650680_168650784_168652953_168653229_168664073_168664112_168666420
transcript_161918.known	chr6	-	5811	23	FSM	ENSG00000186340.17	ENST00000366787.7	5811	23	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_22	19.8962702597229	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTCCCTTTTTTAAAA	NA	False	NA	1	True	AATAAA	-27	NA	169254044	169215779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169217830_169220197_169220338_169221429_169221528_169222196_169222469_169223247_169223476_169225144_169225380_169226179_169226299_169228121_169228282_169229571_169229680_169231979_169232199_169232663_169232817_169232889_169233018_169234733_169234908_169237169_169237347_169237624_169237796_169239598_169239696_169240451_169240593_169241761_169241959_169246196_169246282_169248416_169248974_169250732_169250807_169253723_169253897_169253989
transcript_16192.nic	chr1	-	2154	9	NIC	ENSG00000158850.15	novel	2414	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_8	140.170209031734	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	-3	True	NA	-27	True	AATAAA	-16	NA	161177512	161171309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161176911_161177107_161177422
transcript_161946.known	chr6	-	1589	12	FSM	ENSG00000130024.15	ENST00000366780.8	1589	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	42.4587305704362	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAGCTTAAAATCTGCA	1390	False	NA	-13	True	AATAAA	-17	NA	169723931	169703904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169704089_169705132_169705322_169705615_169705725_169710235_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717901_169718787_169718919_169721004_169721112_169723844
transcript_161947.known	chr6	+	2667	1	FSM	ENSG00000185127.6	ENST00000332290.3	2667	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTAGTATTTCAGTAG	-6	True	NA	14	True	AATAAA	-8	NA	169702189	169704856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169702200_169704900
transcript_161948.known	chr6	-	2078	1	FSM	ENSG00000184786.6	ENST00000628156.1	2078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGAGTTCCTGTTGTTG	-25	True	NA	-5	True	AATAAA	-19	NA	169751587	169749509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169749500_169751600
transcript_161949.known	chr6	+	2160	18	FSM	ENSG00000130023.16	ENST00000366773.8	2160	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	12.7832611138896	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCAGGGTCCAGGT	-18	True	NA	97	True	ATTAAA	-30	NA	169751621	169781600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_161953.known	chr6	+	1908	17	FSM	ENSG00000130023.16	ENST00000392095.8	1908	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.7394551519561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGGATGCTTTTAAT	-15	True	NA	17	True	AGTAAA	-20	NA	169751624	169781520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169751664_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_161959.known	chr6	+	2582	3	FSM	ENSG00000231690.4	ENST00000420557.3	2582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	AAAAAG	-1	NA	169790056	169802873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169790417_169795183_169795363_169800830
transcript_161961.known	chr6	+	5155	11	FSM	ENSG00000112584.14	ENST00000476287.4	5155	11	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_5	21.4720748880959	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTCACATTTCTCTG	-3	True	NA	NA	False	AATAAA	-29	NA	170306757	170407067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_170306843_170317369_170319125_170323078_170323260_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
transcript_161969.known	chr6	-	3779	11	FSM	ENSG00000198719.9	ENST00000366756.4	3779	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	4.42831796509691	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGGCGTAGTTACTTG	-2	True	NA	-4	True	AATAAA	-16	NA	170291078	170282205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170282880_170282987_170283106_170283230_170284030_170284918_170285136_170285253_170285424_170285568_170285700_170286237_170286299_170288238_170288497_170288728_170288790_170289511_170289809_170290085
transcript_161971.known	chr6	-	891	6	FSM	ENSG00000008018.9	ENST00000262193.7	891	6	0	0	0	0	multi-exon	TRUE	canonical	3	4339	junction_4	473.042492805879	1304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCTATAACTTGT	-27	True	NA	-15	True	ATTAAA	-17	NA	170553307	170535119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170535406_170537233_170537341_170543600_170543731_170546102_170546185_170549005_170549114_170553129
transcript_161975.known	chr6	+	1861	8	FSM	ENSG00000112592.15	ENST00000230354.10	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	76.3234256707759	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTAAGAGTCATGTG	13	True	NA	31	True	AATAAA	-32	NA	170554378	170572870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_170554464_170556878_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
transcript_161979.nic	chr6	+	2168	6	ISM	ENSG00000112592.15	ENST00000392092.7	1857	8	-16	2016	-16	-1989	5prime_fragment	FALSE	canonical	3	245	junction_1	35.0279888089511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATATACCAATAGTCCA	-13	True	NA	NA	False	NA	NA	NA	170554352	170570843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611
transcript_161980.known	chr6	+	935	5	FSM	ENSG00000112592.15	ENST00000421512.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	38.9551023615649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGCACTGATTTTCAGT	29	False	NA	NA	False	NA	NA	NA	170554301	170566957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917
transcript_161983.known	chr6	-	936	7	FSM	ENSG00000071994.11	ENST00000392090.6	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	163.818412341904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCTTAAAGCCTTGAA	203	False	NA	-47	True	NA	NA	NA	170584581	170577558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298_170584393_170584491
transcript_161987.known	chr6	-	900	6	FSM	ENSG00000071994.11	ENST00000545869.5	900	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	172.696728399817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGAAGCAGGATGTA	13	True	NA	-82	True	NA	NA	NA	170584605	170577593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583624_170584298
transcript_161988.known	chr6	-	3355	6	FSM	ENSG00000071994.11	ENST00000541970.6	3355	6	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	90.0653096369518	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGGTGATAGTGTTT	-19	True	NA	NA	False	AAAAAG	-20	NA	170584637	170575294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
transcript_161992.known	chr6	-	710	6	FSM	ENSG00000071994.11	ENST00000544866.5	710	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	197.731535168268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTCTTTGACTATATA	395	False	NA	-27	True	TTTAAA	-32	NA	170584389	170578506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583624_170584298
transcript_161993.known	chr6	-	1082	6	FSM	ENSG00000071994.11	ENST00000542896.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	164.566582269913	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGAGTCTTTACTGTT	6	True	NA	-2	True	ATTAAA	-21	NA	170584612	170578481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
transcript_161994.known	chr6	-	1118	5	FSM	ENSG00000071994.11	ENST00000167218.9	1118	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	220.559940832419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGTGTCTACTTATTA	139	False	170584660	-1	True	AATAGA	-26	NA	170584645	170577435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170583056_170583189_170583504_170583748_170584298
transcript_161998.known	chr6	-	1114	5	FSM	ENSG00000071994.11	ENST00000537445.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	217.608593580309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTTTATTTTGAGA	3	True	NA	-12	True	AATAAA	-16	NA	170584615	170581744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298_170584393_170584491
transcript_161999.known	chr6	-	1164	4	FSM	ENSG00000071994.11	ENST00000544336.5	1164	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	219.468043738086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGCTTTTATTTTGA	92	False	NA	-14	True	AATAAA	-14	NA	170584692	170581746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583624_170584298
transcript_1620.known	chr1	-	1645	14	FSM	ENSG00000116151.14	ENST00000378531.8	1645	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	11.320505560877	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGGCACTGCTCCTTGG	-4	True	NA	-33	True	AATAAA	-18	NA	2391554	2321252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2321580_2324096_2324144_2336468_2336549_2336716_2336851_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
transcript_162000.known	chr6	-	1287	4	FSM	ENSG00000071994.11	ENST00000614056.4	1287	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	173.245490561804	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTGCTTTTATTTTG	92	False	NA	-15	True	AATAAA	-13	NA	170584692	170581747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298
transcript_162001.known	chr6	-	1897	4	FSM	ENSG00000071994.11	ENST00000443345.2	1897	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	229.341569619543	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTAACAGTGTTAGT	6	True	NA	-59	True	AATGAA	-1	NA	170584654	170581791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170583189_170583504_170583748_170584298_170584393_170584491
transcript_162002.known	chr6	-	2657	3	FSM	ENSG00000071994.11	ENST00000453163.6	2657	3	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGAGGTAGCTGT	6	True	NA	NA	False	AATAAA	-21	NA	170584612	170581088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170583189_170583504_170583748_170584298
transcript_162008.known	chr7	-	1201	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	27.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTTCAGGTATTA	NA	False	NA	-12	True	AATAAA	-17	NA	149466	144439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_145416_148531_148619_149328
transcript_16201.nnic	chr1	-	1949	8	NNC	ENSG00000158850.15	novel	1933	8	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	110.669391819574	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	423	False	NA	-27	True	AATAAA	-16	NA	161177548	161171309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_161172065_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
transcript_162010.known	chr7	-	2091	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	149428	145935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_147840_148531_148619_149328
transcript_162013.known	chr7	-	746	2	FSM	ENSG00000242474.3	ENST00000497320.2	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTTCATTCAGTTGT	NA	False	NA	NA	False	TTTAAA	-9	NA	149466	148010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148619_149328
transcript_162018.known	chr7	-	2305	6	FSM	ENSG00000197461.13	ENST00000402802.7	2305	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.46969384566991	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGACGTGAGAAGCGT	1279	False	NA	-14	True	ATTAAA	-23	NA	519409	497257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938
transcript_162029.known	chr7	-	2007	11	FSM	ENSG00000188191.15	ENST00000360274.8	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	126.476124229042	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCCGCAGGTAGACCCCA	639	False	NA	NA	False	GGGGCT	-22	NA	712572	549749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712413
transcript_162030.known	chr7	-	2494	11	FSM	ENSG00000188191.15	ENST00000544935.5	2494	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	147.808795408122	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCCGGCTCGGGAGGC	271	False	NA	-41	True	ATTAAA	-16	NA	712940	549196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712847
transcript_162031.known	chr7	-	2553	11	FSM	ENSG00000188191.15	ENST00000406797.5	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	145.287473651378	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	4	False	NA	-42	True	ATTAAA	-15	NA	713207	549197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_713054
transcript_162032.known	chr7	-	2472	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	128.116392393792	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	3	True	NA	-42	True	ATTAAA	-15	NA	727281	549197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
transcript_162034.known	chr7	-	1917	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_10	71.0113371230256	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGACCCCAGTAGGGGG	-9	True	NA	NA	False	GGGGCT	-30	NA	727650	549741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_162059.nnic	chr7	-	1160	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	-43	586	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	146.448322322624	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCACAAAACCTGCACAC	NA	False	NA	NA	False	AATAAA	-4	NA	727693	578669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_162070.known	chr7	-	1006	9	FSM	ENSG00000188191.15	ENST00000430040.5	1006	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	162.802027014408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACGTGCTTCCCACGT	271	False	NA	NA	False	NA	NA	NA	712940	579255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712847
transcript_162093.known	chr7	+	3412	13	FSM	ENSG00000164818.16	ENST00000297440.11	3412	13	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	49.54199957836	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTATGCCTGACTT	-4	True	NA	14	True	ATTAAA	-15	NA	726698	786475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_727316_729662_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952_780145_785516
transcript_162096.nnic	chr7	+	2875	12	NIC	ENSG00000164818.16	novel	3412	13	NA	NA	-175	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_11	113.951707909698	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTATGCCTGACTT	341	False	NA	14	True	ATTAAA	-15	NA	727043	786475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_727316_729662_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_785516
transcript_162103.nic	chr7	+	4404	23	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_8	120.810768292968	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	NA	False	NA	9	True	AATAAA	-19	NA	816608	874899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_16211.known	chr1	-	1933	8	FSM	ENSG00000158850.15	ENST00000319769.10	1933	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	48.9051560238211	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	2	True	NA	-27	True	AATAAA	-16	NA	161177507	161171309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
transcript_162112.nic	chr7	+	4307	22	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_7	130.020982084866	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	NA	False	NA	9	True	AATAAA	-19	NA	816608	874899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_162117.nic	chr7	+	4011	20	NIC	ENSG00000164828.18	novel	4062	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	109.281993103258	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	NA	False	NA	9	True	AATAAA	-19	NA	816608	874899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_162128.nic	chr7	+	3912	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_6	94.9152968717209	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	NA	False	NA	9	True	AATAAA	-19	NA	816608	874899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_16213.known	chr1	-	1871	8	FSM	ENSG00000158850.15	ENST00000367998.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	125.306318553327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	12	True	NA	-29	True	AATAAA	-14	NA	161177497	161171311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176509_161177422
transcript_162133.nic	chr7	+	4054	18	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	149	junction_6	86.922866813552	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	NA	False	NA	9	True	AATAAA	-19	NA	816608	874899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_162139.known	chr7	+	3812	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	109.800069960459	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	-16	True	NA	12	True	AATAAA	-22	NA	816614	874902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_162142.known	chr7	+	3717	17	FSM	ENSG00000164828.18	ENST00000452783.6	3717	17	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	119.7016473362	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	-16	True	NA	30	True	AATAAA	-40	NA	816614	874920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_16215.known	chr1	-	2414	8	FSM	ENSG00000158850.15	ENST00000622395.4	2414	8	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_6	65.0108311227084	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	3	False	NA	-28	True	AATAAA	-15	NA	161177968	161171310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161177422
transcript_162153.known	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_3	29.1161467230813	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	-3	True	NA	16	True	AATAAA	-16	NA	876553	896436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
transcript_162171.nic	chr7	+	2740	6	NIC	ENSG00000164828.18	novel	1309	7	NA	NA	-6	1645	combination_of_known_junctions	FALSE	canonical	3	297	junction_1	71.3234884172108	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTACAAGCTGCCACAC	NA	False	NA	NA	False	AATAAA	-3	NA	816608	845517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340
transcript_162192.known	chr7	+	4062	20	FSM	ENSG00000164828.18	ENST00000405266.5	4062	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	124.020505855186	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGGGATATAAACAGTC	11	True	NA	10	True	AATAAA	-20	NA	832500	874900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_162193.known	chr7	+	3868	18	FSM	ENSG00000164828.18	ENST00000425407.6	3868	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	94.6547176369686	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	15	True	NA	30	True	AATAAA	-40	NA	832504	874920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_162194.known	chr7	+	4010	19	FSM	ENSG00000164828.18	ENST00000401592.6	4010	19	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	110.366505028015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTGTTTCTGCCCCT	-14	True	NA	44	True	TATAAA	-20	NA	832475	874934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_162195.known	chr7	-	1420	12	FSM	ENSG00000240230.6	ENST00000457254.5	1420	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.7639163837028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGCTTCCAGGATGCTT	-11	True	NA	NA	False	NA	NA	NA	975549	898777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_973180_973293_975427
transcript_162197.known	chr7	-	2118	11	FSM	ENSG00000105963.15	ENST00000611167.4	2118	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	8.78862901708793	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGTCCGAGGATGG	-3	True	NA	-3	True	AATAAA	-22	NA	945816	897900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_945761
transcript_162199.known	chr7	-	2360	11	FSM	ENSG00000105963.15	ENST00000649206.1	2360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	13.3056379027839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTGTGTCCGAGGAT	15	False	NA	-5	True	AATAAA	-20	NA	954697	897902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900614_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_954395
transcript_162203.known	chr7	-	4839	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	14	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGCGTTTTCCAAG	-11	True	NA	-5	True	ATTAAA	-17	NA	975549	964851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_969457_973180_973293_975427
transcript_162220.known	chr7	-	1294	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	271.541318218793	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGCGTCCCCTGCCTGTG	12	True	NA	-16	True	AATAAA	-37	NA	1138257	996985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
transcript_162221.known	chr7	-	621	5	FSM	ENSG00000146540.15	ENST00000491163.1	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	461.130404549516	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGTGGGTTCAGCGC	9	True	NA	NA	False	NA	NA	NA	1138260	997632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
transcript_162222.known	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	455.621431551336	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	18	True	NA	-46	True	AATAAA	-7	NA	1028339	997015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
transcript_162234.known	chr7	-	2621	2	FSM	ENSG00000146540.15	ENST00000465681.1	2621	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCACTGGCCACCAAAG	5	True	NA	-22	True	AATAAA	-25	NA	1028352	1024501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1027028_1028257
transcript_162235.known	chr7	+	1883	2	FSM	ENSG00000164849.10	ENST00000444847.2	1883	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGGATTTCTGACTGAA	-7	True	NA	8	True	AATAAA	-14	NA	1044545	1059261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1044659_1057491
transcript_162236.known	chr7	+	1105	3	FSM	ENSG00000164850.16	ENST00000413368.5	1105	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCAACATCCTGATCC	-5	True	NA	NA	False	NA	NA	NA	1086806	1091949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1087245_1088197_1088322_1091406
transcript_162237.known	chr7	+	2613	2	FSM	ENSG00000164850.16	ENST00000397088.4	2613	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCGGAGGCTCTGTCT	-4	True	NA	NA	False	AATAAA	-16	NA	1088112	1093810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1088322_1091406
transcript_162238.known	chr7	-	878	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	10.3077640640442	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	-22	True	NA	-4	True	AATAAA	-19	NA	1160196	1152906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_162241.known	chr7	+	1939	4	FSM	ENSG00000229043.3	ENST00000662926.1	1939	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	12.0277457017791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCTACTACAAATAAAAAA	-27	True	NA	-27	True	NA	NA	NA	1160431	1165607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1160624_1162961_1163218_1163451_1163496_1164160
transcript_162245.known	chr7	+	1714	3	FSM	ENSG00000229043.3	ENST00000423008.2	1714	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACATGGTGAAACCC	12	True	NA	-54	True	NA	NA	NA	1160373	1165580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1160624_1163451_1163496_1164160
transcript_162251.known	chr7	-	3096	17	FSM	ENSG00000164877.19	ENST00000297508.8	3096	17	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_13	7.0267346612776	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTACGTGCCTCCGTGTT	-1	True	NA	0	True	AATAAA	-24	NA	1459470	1434358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1434673_1435100_1435148_1436741_1436857_1437534_1437609_1437889_1437981_1438096_1438221_1438288_1438354_1438839_1438996_1439924_1440086_1440590_1440685_1442191_1442485_1444651_1445429_1446712_1446829_1447574_1447766_1448619_1448762_1450239_1450289_1459183
transcript_162257.nic	chr7	-	3103	16	NIC	ENSG00000164877.19	novel	3096	17	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	9.5405567039991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGACTCCTACGTGCCT	NA	False	NA	-7	True	AATAAA	-17	NA	1459531	1434365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_1434673_1436741_1436857_1437534_1437609_1437889_1437981_1438096_1438221_1438288_1438354_1438839_1438996_1439924_1440086_1440590_1440685_1442191_1442485_1444651_1445429_1446712_1446829_1447574_1447766_1448619_1448762_1450239_1450289_1459183
transcript_162262.nic	chr7	-	1342	2	ISM	ENSG00000164877.19	ENST00000297508.8	3096	17	-61	14936	-61	-2638	5prime_fragment	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCCTCAAGTGTGCCG	NA	False	NA	NA	False	AATAAA	-24	NA	1459531	1449294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_1450289_1459183
transcript_162264.known	chr7	-	6981	48	FSM	ENSG00000164880.16	ENST00000404767.8	6981	48	0	0	0	0	multi-exon	TRUE	canonical	2	243	junction_47	85.0503272840155	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTGTCCC	-18	True	NA	-6	True	AATGAA	-16	NA	1504389	1470276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1470693_1470845_1470956_1471132_1471225_1471570_1471642_1472272_1472387_1473071_1473185_1473565_1473694_1474167_1474361_1474704_1474839_1475947_1476072_1476228_1476456_1476569_1476658_1476793_1476919_1477549_1477674_1477752_1477937_1478365_1478507_1478725_1478886_1479429_1479685_1480316_1480442_1480834_1480934_1481341_1481489_1482545_1482708_1483741_1483854_1484002_1484171_1485097_1485203_1485289_1485470_1486624_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753_1493912_1494815_1494894_1495432_1495554_1496155_1496265_1497137_1497315_1498411_1498554_1498706_1498853_1498974_1499162_1499254_1499361_1499472_1499633_1499883_1500022_1500169_1500367_1502900_1503192_1503902_1504002_1504322
transcript_162289.known	chr7	-	6051	9	FSM	ENSG00000164855.16	ENST00000297477.10	6051	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.2220486043289	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTCTGTTTCTCTCT	3	True	NA	-1	True	GATAAA	-26	NA	1556205	1542234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1547182_1547741_1547940_1548518_1548689_1549853_1549946_1550122_1550199_1550304_1550396_1550816_1550983_1555265_1555485_1556113
transcript_162293.known	chr7	+	3380	3	FSM	ENSG00000198517.10	ENST00000343242.9	3380	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCGTTGCGTAGCTGG	-4	True	NA	14	True	AATAAA	-19	NA	1530701	1543043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1530899_1539148_1539229_1539940
transcript_162294.known	chr7	+	588	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.68178700572909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGTAGTTGTAGCC	-1	True	NA	NA	False	AATAAA	-20	NA	1570141	1579485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
transcript_162295.known	chr7	+	5701	4	FSM	ENSG00000230487.9	ENST00000437621.6	5701	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAACTCTCCATCCTTCT	-19	True	NA	NA	False	AATAAA	-19	NA	1570072	1589626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1584383
transcript_162296.nnic	chr7	-	926	3	NNC	ENSG00000157778.9	novel	774	3	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	149	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-13	True	NA	-3	True	ATTAAA	-21	NA	1570017	1567331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_1567851_1569123_1569361_1569847
transcript_162297.known	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	111	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-41	True	NA	-22	True	ATTAAA	-2	NA	1570045	1567350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1567851_1569123_1569361_1570008
transcript_162298.known	chr7	-	1007	3	FSM	ENSG00000157778.9	ENST00000252329.3	1007	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	149.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGAGGGAGGAACTTTG	NA	False	NA	NA	False	NA	NA	NA	1571005	1567612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1567851_1569123_1569361_1570473
transcript_162299.known	chr7	-	1428	2	FSM	ENSG00000157778.9	ENST00000288607.3	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-28	True	NA	-3	True	ATTAAA	-21	NA	1570032	1567331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1567851_1569123
transcript_162308.known	chr7	-	2762	19	FSM	ENSG00000002822.16	ENST00000399654.6	2762	19	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_18	52.6940856896357	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCACTCGCCCTGTGTA	9218	False	NA	-10	True	AATAAA	-17	NA	2232974	1815793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230765_2232871
transcript_162325.known	chr7	-	2695	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_18	27.0724337041698	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-3	True	NA	-11	True	AATAAA	-16	NA	2232945	1815794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
transcript_162326.known	chr7	-	5697	24	FSM	ENSG00000286192.1	ENST00000651235.1	5697	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	98.0747178611994	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTAGACACTCCCACTC	-23	True	NA	-20	True	AATAAA	-7	NA	2242215	1815803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149095_2149239_2200261_2200558_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871_2232971_2234197_2235565_2238014_2238938_2239417_2239708_2242161
transcript_162333.nnic	chr7	-	2516	4	NNC	ENSG00000122687.19	novel	2511	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_2	16.9901932498329	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	NA	False	NA	-22	True	CATAAA	-14	NA	2242225	2234294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2238014_2238938_2239417_2239677_2242161
transcript_162335.known	chr7	-	2511	4	FSM	ENSG00000122687.19	ENST00000486040.1	2511	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	65.4539702556096	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	3	True	NA	-22	True	CATAAA	-14	NA	2242189	2234294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2235565_2238014_2238938_2239417_2239708_2242161
transcript_16234.known	chr1	+	813	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	132.393353307483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	13	True	NA	12	True	AATAAA	-18	NA	161166469	161171220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
transcript_162340.nnic	chr7	-	1693	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	NA	False	NA	-5	True	AATAAA	-29	NA	2242225	2234194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_162342.known	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	165.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	23	True	NA	-41	True	NA	NA	NA	2242169	2234230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2235565_2239417_2239708_2241974
transcript_162343.known	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	92.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-13	True	NA	-5	True	AATAAA	-29	NA	2242205	2234194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2235565_2239417_2239708_2242161
transcript_162349.nnic	chr7	-	1531	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-35	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	67	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGTGGTGTGTTTA	NA	False	NA	-18	True	CATAAA	-18	NA	2242240	2234290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239529_2239708_2242161
transcript_162352.nnic	chr7	-	1595	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGATGTGGTGTGTT	NA	False	NA	-20	True	CATAAA	-16	NA	2242225	2234292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_162358.nnic	chr7	-	1390	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-20	-203	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAATTTCCATCTGGGG	NA	False	NA	NA	False	AAAAAG	-17	NA	2242225	2234497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_162361.known	chr7	-	582	2	FSM	ENSG00000122687.19	ENST00000407040.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGAGATTTGAGCTGA	2948	False	NA	NA	False	NA	NA	NA	2239244	2235046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2235565_2239180
transcript_162363.nnic	chr7	+	716	5	NIC	ENSG00000106268.16	novel	698	4	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	117	junction_1	388.518017600214	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-3	True	NA	19	True	AATAAA	-15	NA	2242218	2251145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_2242257_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_162365.known	chr7	+	712	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	410.582817468047	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2	True	NA	19	True	AATAAA	-15	NA	2242258	2251145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_162366.known	chr7	+	783	5	FSM	ENSG00000106268.16	ENST00000397048.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	445.532827073382	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	4	True	NA	19	True	AATAAA	-15	NA	2242260	2251145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242293_2242924_2243049_2244562_2244727_2249856_2250003_2250828
transcript_162368.known	chr7	+	658	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	297.694474251707	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	4	True	NA	19	True	AATAAA	-15	NA	2242225	2251145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
transcript_162370.nnic	chr7	+	501	3	NIC	ENSG00000106268.16	novel	658	4	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	466	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-3	True	NA	19	True	AATAAA	-15	NA	2242218	2251145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_2242257_2249856_2250003_2250828
transcript_162371.known	chr7	+	771	4	FSM	ENSG00000106268.16	ENST00000343985.8	771	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	416.48769489626	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	648	False	NA	19	True	AATAAA	-15	NA	2242904	2251145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2243049_2244562_2244727_2249856_2250003_2250828
transcript_162372.known	chr7	+	698	4	FSM	ENSG00000106268.16	ENST00000339737.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	342.0061727838	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	648	False	NA	19	True	AATAAA	-15	NA	2242904	2251145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242976_2244562_2244727_2249856_2250003_2250828
transcript_162377.known	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	19.3051806518354	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-33	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_162380.nnic	chr7	-	1341	10	NIC	ENSG00000106266.11	novel	4704	11	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	53.7090929607517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTCCCTGCGGCCGCAC	-21	True	NA	-42	True	NA	NA	NA	2314429	2255039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_162388.nic	chr7	+	2730	20	NIC	ENSG00000106263.19	novel	2966	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	104	junction_1	613.768862086113	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	-17	True	NA	46	True	AATAAA	-20	NA	2354079	2380745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_2354196_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
transcript_162399.known	chr7	+	3096	19	FSM	ENSG00000106263.19	ENST00000360876.9	3096	19	0	0	0	0	multi-exon	FALSE	canonical	1	734	junction_11	441.730914264877	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	-36	True	NA	46	True	AATAAA	-20	NA	2354826	2380745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
transcript_16240.known	chr1	+	816	5	FSM	ENSG00000143224.18	ENST00000497522.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	156.64510046599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGCGTCCTCTACCTTT	-27	True	NA	NA	False	GGGGCT	-41	NA	161166429	161177041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161176848
transcript_162404.known	chr7	+	2966	19	FSM	ENSG00000106263.19	ENST00000397011.2	2966	19	0	0	0	0	multi-exon	FALSE	canonical	1	734	junction_11	440.498486565694	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	19	True	NA	46	True	AATAAA	-20	NA	2354881	2380745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
transcript_162412.known	chr7	+	15979	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGGGACTGAACAAAACC	-9	True	NA	NA	False	AGTAAA	-17	NA	2403587	2448483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2403646_2432562
transcript_162414.nnic	chr7	+	1602	2	NNC	ENSG00000136213.10	novel	15979	2	NA	NA	-31	686	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGGAATGCTGGAG	-2	True	NA	51	True	AATATA	-22	NA	2403556	2434061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_2403660_2432562
transcript_162415.nnic	chr7	+	2157	2	NNC	ENSG00000136213.10	novel	15979	2	NA	NA	-31	1241	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCGGGTGTGGTGGTGT	-2	True	NA	NA	False	ACTAAA	-35	NA	2403556	2434616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_2403660_2432562
transcript_162416.known	chr7	+	15985	2	FSM	ENSG00000136213.10	ENST00000618655.2	15985	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGGGACTGAACAAAACCC	14	True	NA	NA	False	AGTAAA	-18	NA	2403610	2448484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2403674_2432562
transcript_16242.known	chr1	+	1891	15	FSM	ENSG00000158864.13	ENST00000678507.1	1891	15	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	345.850592963293	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	-2	True	NA	9	True	AATAAA	-16	NA	161197415	161214381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161197488_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_16243.known	chr1	+	2319	14	FSM	ENSG00000158864.13	ENST00000496553.6	2319	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	357.625171532443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	2376	False	NA	9	True	AATAAA	-16	NA	161201680	161214381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161202481_161203402_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_16244.known	chr1	+	1508	13	FSM	ENSG00000158864.13	ENST00000677948.1	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	469.236791680562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	-2	True	NA	9	True	AATAAA	-16	NA	161202364	161214381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209842_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_162485.known	chr7	-	2779	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	0	0	0	multi-exon	TRUE	canonical	3	528	junction_13	96.0347570216795	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTCATTCATTCGC	-11	True	NA	0	True	NA	NA	NA	2555524	2537809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_16255.known	chr1	-	9777	9	FSM	ENSG00000158859.10	ENST00000367996.6	9777	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.17526131928308	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTTCCTTTGTCTGCT	-2	True	NA	NA	False	AATAAA	-21	NA	161199054	161184301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161191565_161192064_161192241_161193212_161193389_161193639_161193827_161193934_161194222_161195464_161195636_161196170_161196304_161196556_161196881_161197994
transcript_16258.known	chr1	+	2042	15	FSM	ENSG00000158864.13	ENST00000367993.7	2042	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	346.103330388661	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTATCTTAGTGTCT	10	False	NA	23	True	AATAAA	-30	NA	161199314	161214395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161199524_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_162581.known	chr7	-	5226	11	FSM	ENSG00000106009.16	ENST00000469750.5	5226	11	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_10	81.5943625503625	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	20	False	NA	-33	True	ATTAAA	-21	NA	2555694	2537880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_16259.known	chr1	-	421	4	FSM	ENSG00000158874.11	ENST00000468465.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	870.528702698666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161222523_161222917_161222995_161223349_161223426_161223594
transcript_16260.known	chr1	-	265	4	FSM	ENSG00000158874.11	ENST00000469730.2	265	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	1033.24935142599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAGGAGCAGCTGACAC	67	False	NA	NA	False	ATTAAA	-39	NA	161223559	161222507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223518
transcript_16261.known	chr1	-	474	4	FSM	ENSG00000158874.11	ENST00000367990.7	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	1512	junction_3	337.471315653477	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-2	True	NA	-14	True	AATAAA	-16	NA	161223628	161222291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223594
transcript_162613.known	chr7	-	4440	10	FSM	ENSG00000106009.16	ENST00000467558.5	4440	10	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_8	60.7102000907733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	1267	False	NA	-33	True	ATTAAA	-21	NA	2554447	2537880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543963_2544908_2545057_2547323_2547479_2554304
transcript_162614.known	chr7	+	6857	22	FSM	ENSG00000106012.18	ENST00000402050.7	6857	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	9.72967967955095	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGTGCCCCGTGAAGA	1	True	NA	17	True	AATAAA	-19	NA	2558978	2614728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_162618.known	chr7	+	2170	21	FSM	ENSG00000106012.18	ENST00000438376.6	2170	21	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.00263850212814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCGTCACTGTCTCCAC	12	True	NA	NA	False	NA	NA	NA	2559051	2610162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_16262.known	chr1	-	401	3	FSM	ENSG00000158874.11	ENST00000463812.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161222523_161222917_161223051_161223594
transcript_162621.known	chr7	+	2400	21	FSM	ENSG00000106012.18	ENST00000476665.5	2400	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	9.87471518576612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTACTTTGTTAAA	39	True	NA	2	True	AGTAAA	-15	NA	2559078	2607555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123
transcript_162625.known	chr7	+	2289	20	FSM	ENSG00000106012.18	ENST00000611775.4	2289	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.09049608731962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTTGTTAAAGTCCAAA	22	False	NA	9	True	AGTAAA	-22	NA	2559148	2607562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123
transcript_162629.known	chr7	+	2235	20	FSM	ENSG00000106012.18	ENST00000325997.13	2235	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	8.15025108802078	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTGCGTCGTGTCTCTT	17	True	NA	10	True	NA	NA	NA	2559056	2610278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_16264.known	chr1	-	263	2	FSM	ENSG00000158874.11	ENST00000491350.1	263	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTACAATAAATGCTGAAT	218	False	NA	-41	True	NA	NA	NA	161223408	161222318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161222523_161223349
transcript_162640.known	chr7	+	2251	18	FSM	ENSG00000106012.18	ENST00000470731.5	2251	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	10.6009727307153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCTTCATTCATTCC	8	True	NA	12	True	AATAAA	-24	NA	2559047	2601949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440
transcript_162645.known	chr7	+	6775	20	FSM	ENSG00000106012.18	ENST00000623361.3	6775	20	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	8.15025108802078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCCGTGAAGACTTCT	-6	True	NA	22	True	AATAAA	-24	NA	2558971	2614733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_16265.known	chr1	+	2790	10	FSM	ENSG00000158882.15	ENST00000367988.8	2790	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.43332678968494	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATGTTTCACCAACCC	0	True	NA	12	True	AGTAAA	-17	NA	161226059	161230746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_162658.known	chr7	+	4805	14	FSM	ENSG00000136295.15	ENST00000258796.12	4805	14	0	0	0	0	multi-exon	FALSE	canonical	3	1254	junction_5	132.594456674585	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTGAGCTGCT	-15	True	NA	25	True	AATAAA	-14	NA	2631985	2664802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
transcript_162662.known	chr7	+	4537	13	FSM	ENSG00000136295.15	ENST00000407643.5	4537	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	389.306934036486	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTCTTCCTGAGCTG	121	False	NA	23	True	AATAAA	-12	NA	2632155	2664800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
transcript_162669.known	chr7	-	4369	4	FSM	ENSG00000146535.14	ENST00000275364.8	4369	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_1	7.71722460186015	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGCCAGTATTCAAAACC	18	True	NA	NA	False	AATAAA	-28	NA	2844308	2728104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2731751_2733450_2733502_2794927_2795144_2843852
transcript_162678.known	chr7	+	8615	7	FSM	ENSG00000174945.14	ENST00000683327.1	8615	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.59861050777091	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTGAGATG	-14	True	NA	NA	False	AATAAA	-16	NA	2688201	2719683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2688297_2700233_2700756_2702721_2702890_2708587_2708717_2709074_2709245_2709639_2709817_2712329
transcript_162681.nic	chr7	-	4457	26	NIC	ENSG00000198286.10	novel	4287	25	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_25	20.4441091759949	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGACCCTTTGTTTGT	NA	False	NA	-9	True	ATTAAA	-18	NA	3043979	2906141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928696_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_2980519_2980581_3043666
transcript_162683.known	chr7	-	4287	25	FSM	ENSG00000198286.10	ENST00000396946.9	4287	25	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_13	9.4537433796824	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGACCCTTTGTTTGT	-11	True	NA	-9	True	ATTAAA	-18	NA	3043867	2906141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928699_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
transcript_16269.known	chr1	+	2807	9	FSM	ENSG00000158882.15	ENST00000545897.5	2807	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.0792526117647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAATGTTTCACCAAC	2572	False	NA	10	True	AGTAAA	-15	NA	161225938	161230744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_162700.known	chr7	+	5529	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_9	15.4958411759414	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTCCACACTGCCT	-29	True	NA	16	True	AATAAA	-17	NA	4775622	4794397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_162710.nic	chr7	+	3467	16	NIC	ENSG00000242802.9	novel	5743	17	NA	NA	-46	0	intron_retention	TRUE	canonical	3	113	junction_9	15.3825297731622	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTCTGTATGAAGAGT	NA	False	NA	15	True	AGTAAA	-17	NA	4775568	4791752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4790592_4790672_4790888_4791114
transcript_162716.known	chr7	+	2667	16	FSM	ENSG00000242802.9	ENST00000647984.1	2667	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	37.1606721623218	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGAAGAGCTGCAGTA	-37	True	NA	-23	True	NA	NA	NA	4775614	4791714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4775757_4781174_4781313_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_16272.known	chr1	+	2396	7	FSM	ENSG00000158882.15	ENST00000474486.5	2396	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	18.2665450117603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCAGTATCCAAATAC	0	True	NA	43	True	AATAAA	-26	NA	161226059	161230615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226137_161226354_161226605_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_16273.known	chr1	+	2636	9	FSM	ENSG00000158882.15	ENST00000367987.1	2636	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	7.74596669241483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGTATCCAAATACAGC	244	False	NA	46	True	AATAAA	-29	NA	161226303	161230618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_162737.known	chr7	-	5736	15	FSM	ENSG00000157927.17	ENST00000399583.4	5736	15	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_5	9.7321264744292	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTTCTTATGGGTGTT	-10	True	NA	NA	False	NA	NA	NA	4883716	4797054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_4799484_4799629_4799770_4800170_4800311_4801652_4801996_4803545_4803755_4805565_4805717_4815277_4815451_4816227_4816466_4817238_4817352_4822393_4822555_4832140_4832179_4834606_4835240_4836357_4836606_4877604_4878204_4883595
transcript_16274.known	chr1	+	1406	3	FSM	ENSG00000248485.2	ENST00000504449.2	1406	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTTTTTCTTGGGA	1	True	NA	11	True	AATAAA	-32	NA	161258744	161285450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161258984_161283667_161283723_161284338
transcript_16275.known	chr1	-	366	2	FSM	ENSG00000158887.19	ENST00000488271.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACAAGTGATCGCCACCC	20	True	NA	NA	False	NA	NA	NA	161306190	161305694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161305978_161306107
transcript_162750.nic	chr7	+	2332	7	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	109.554273713484	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	-42	True	NA	18	True	ATTAAA	-18	NA	4974015	4998167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
transcript_162751.nic	chr7	+	2280	7	NIC	ENSG00000196204.12	novel	576	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	109.554273713484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	-42	True	NA	18	True	ATTAAA	-18	NA	4974015	4998167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4995474_4995583_4996609
transcript_162755.known	chr7	+	2201	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.464003402149	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	-21	True	NA	16	True	ATTAAA	-16	NA	4974036	4998165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
transcript_162756.nnic	chr7	+	2217	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	124.469433998874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	-42	True	NA	18	True	ATTAAA	-18	NA	4974015	4998167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4995474_4995583_4996609
transcript_162757.nic	chr7	+	2170	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	103.464003402149	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	-42	True	NA	16	True	ATTAAA	-16	NA	4974015	4998165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4996609
transcript_16276.known	chr1	+	571	7	FSM	ENSG00000143252.16	ENST00000504963.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	411.183961263082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTCCTACACATTATT	9	False	NA	NA	False	AAGAAA	-15	NA	161314390	161362452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161339561_161339589_161340593_161340656_161356676_161356841_161362328
transcript_162760.nic	chr7	+	666	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-21	8988	0	-191	5prime_fragment	FALSE	canonical	0	0	junction_3	113.151171005872	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCAAACTATGTTGGT	-42	True	NA	NA	False	AAGAAA	-40	NA	4974015	4989177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_162761.known	chr7	+	1360	5	FSM	ENSG00000196204.12	ENST00000403969.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.473143645385	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTTCACAGTGAACAA	-8	True	NA	NA	False	NA	NA	NA	4974049	4997452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4996609
transcript_162762.nic	chr7	+	614	5	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	-191	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	113.151171005872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCAAACTATGTTGGT	-42	True	NA	NA	False	AAGAAA	-40	NA	4974015	4989177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062
transcript_16278.known	chr1	+	1308	6	FSM	ENSG00000143252.16	ENST00000367975.7	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	75.8171484560057	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAGAGAAACCAAGAAAAT	-1	True	NA	12	True	ATTAAA	-31	NA	161314380	161363206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161356676_161356841_161362328
transcript_162786.known	chr7	+	1663	13	FSM	ENSG00000157954.15	ENST00000404704.7	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	89.1884708543281	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGAGGAAATACATCATT	2	True	NA	-26	True	ATTAAA	-38	NA	5190245	5231104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
transcript_162791.known	chr7	+	4445	13	FSM	ENSG00000157954.15	ENST00000288828.9	4445	13	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	78.8271667778452	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATTTTTATTCAGTTCT	-11	True	NA	9	True	AATAAA	-34	NA	5190232	5233840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_162798.known	chr7	+	1700	13	FSM	ENSG00000157954.15	ENST00000466014.5	1700	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	117.187972221271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGACCTGTGACCTCTGA	15	True	NA	NA	False	NA	NA	NA	5190258	5230947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5193117_5193346_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_16280.known	chr1	+	1127	5	FSM	ENSG00000143252.16	ENST00000342751.8	1127	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	342.801691944483	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTCTCCTTGAAATCT	-1	True	NA	-5	True	ATTAAA	-14	NA	161314380	161363189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161362328
transcript_16281.known	chr1	+	460	5	FSM	ENSG00000143252.16	ENST00000432287.6	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	352.81333591575	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATTATTACATTCACC	0	True	NA	NA	False	AAGAAA	-24	NA	161314381	161362461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161356676_161356841_161362328
transcript_162811.known	chr7	+	1948	12	FSM	ENSG00000157954.15	ENST00000382384.6	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	75.789617466395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACCATTTTCCCTCCG	29	False	NA	-8	True	NA	NA	NA	5190272	5231470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
transcript_162816.known	chr7	+	2112	12	FSM	ENSG00000157954.15	ENST00000401525.7	2112	12	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	59.6158501304549	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTCTGGGATTTCTTCC	NA	False	NA	46	True	ATTAAA	-16	NA	5190195	5231524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_16283.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000513009.5	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	315.105626029678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTTGTATTTTCAGAT	6	True	NA	NA	False	NA	NA	NA	161314387	161362540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161362328
transcript_16284.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000392169.6	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	417.591773013896	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	6	True	NA	NA	False	GGGGCT	-14	NA	161314387	161362433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161340593_161340656_161356676_161356841_161362328
transcript_162851.known	chr7	+	2839	11	FSM	ENSG00000164638.11	ENST00000297195.8	2839	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	22.973027662892	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	22	False	NA	28	True	ATTAAA	-22	NA	5282968	5304060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5283083_5287805_5287986_5290731_5290864_5291123_5291238_5291692_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
transcript_162852.nic	chr7	+	2473	11	NIC	ENSG00000164638.11	novel	5714	11	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	30.0106647710443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGCCGCCTGCAAGCAG	NA	False	NA	25	True	ATTAAA	-19	NA	5282909	5304057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_5283083_5287808_5287986_5290731_5290864_5291123_5291238_5291692_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5303215
transcript_162853.known	chr7	+	2734	11	FSM	ENSG00000164638.11	ENST00000406453.3	2734	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	31.6569107779012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	82	False	NA	28	True	ATTAAA	-22	NA	5283028	5304060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5283083_5287808_5287986_5290731_5290864_5291123_5291238_5291729_5291822_5294864_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
transcript_16286.nic	chr1	+	1352	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	-59	-78	combination_of_known_junctions	FALSE	canonical	3	165	junction_1	80.4999378881748	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTCTGTGTTTCATA	NA	False	NA	43	True	ATTAAA	-15	NA	161749698	161757160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_162862.known	chr7	-	2651	1	FSM	ENSG00000234432.4	ENST00000610122.1	2651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTTTTTTCTACTCC	NA	False	NA	NA	False	ATTAAA	-16	NA	5428927	5426276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5426300_5428900
transcript_162867.known	chr7	-	8270	5	FSM	ENSG00000155034.20	ENST00000382368.8	8270	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.1860576069539	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGCTGTGTGGTCCTTCC	-33	True	NA	-1	True	AATAAA	-23	NA	5513809	5475796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5481932_5491230_5491450_5500487_5502032_5505411_5505631_5513656
transcript_16287.known	chr1	+	1330	6	FSM	ENSG00000081721.12	ENST00000367943.5	1330	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	57.88471300784	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGTACAAAAATTTGA	-8	True	NA	121	True	NA	NA	NA	161749785	161757238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161750146_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_162873.nic	chr7	-	3164	5	NIC	ENSG00000155034.20	novel	2686	3	NA	NA	6	0	intron_retention	FALSE	canonical	2	9	junction_1	24.279621084358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGTCCTCACGGCTCT	-27	True	NA	0	True	AATAAA	-20	NA	5513803	5489177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_5490213_5491230_5491450_5500487_5502032_5505411_5505631_5513656
transcript_16288.nnic	chr1	+	1195	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	0	-78	combination_of_known_splicesites	FALSE	canonical	1	18	junction_1	137.899963741837	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTCTGTGTTTCATA	-8	True	NA	43	True	ATTAAA	-15	NA	161749785	161757160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161750089_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_162881.nic	chr7	-	3512	3	ISM	ENSG00000155034.20	ENST00000382368.8	8270	5	6	23089	6	-9708	5prime_fragment	FALSE	canonical	3	64	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAAAATGGGTTTGGG	-27	True	NA	NA	False	AATAAA	-16	NA	5513803	5498885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_5502032_5505411_5505631_5513656
transcript_162882.nic	chr7	-	2346	3	ISM	ENSG00000155034.20	ENST00000382368.8	8270	5	6	24255	6	-10874	5prime_fragment	FALSE	canonical	3	64	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTCATCCAAGCTGGA	-27	True	NA	NA	False	TTTAAA	-36	NA	5513803	5500051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_5502032_5505411_5505631_5513656
transcript_162887.known	chr7	-	2554	6	FSM	ENSG00000075624.17	ENST00000674681.1	2554	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	12673.2737743647	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGGACCTCAGGGCCT	-1	True	NA	NA	False	NA	NA	NA	5530601	5526408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529685_5530541
transcript_162888.known	chr7	-	1495	6	FSM	ENSG00000075624.17	ENST00000493945.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	12655.6763801861	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGATTGCACATTGT	-2	True	NA	-62	True	NA	NA	NA	5530602	5527535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529734_5530523
transcript_16289.known	chr1	+	740	5	FSM	ENSG00000081721.12	ENST00000464004.2	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	80.0468612751306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACCGTGAAGGAAGTGG	-14	True	NA	NA	False	NA	NA	NA	161749779	161753105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074
transcript_162898.known	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	236	junction_4	13567.2290349762	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	786	False	NA	-3	True	AATAAA	-22	NA	5530604	5527146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
transcript_1629.known	chr1	-	1500	11	FSM	ENSG00000116151.14	ENST00000378529.7	1500	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.34326075344646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCCTTCTACTTGGA	4	True	NA	NA	False	CATAAA	-14	NA	2391707	2355174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2355465_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
transcript_162910.known	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_5	1415.47594822378	93659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-1	True	NA	-4	True	AATAAA	-21	NA	5530601	5527147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_162911.known	chr7	-	2021	5	FSM	ENSG00000075624.17	ENST00000642480.2	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	31405	junction_2	243.644720853952	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-3	True	NA	-3	True	AATAAA	-22	NA	5529949	5527146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534
transcript_162912.known	chr7	-	1845	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_4	14377.5667389629	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
transcript_162913.known	chr7	-	811	3	FSM	ENSG00000075624.17	ENST00000676319.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14091	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	786	False	NA	-3	True	AATAAA	-22	NA	5530604	5527146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527784_5529570_5529664_5530523
transcript_162914.known	chr7	-	2245	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_4	1514.40307959935	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
transcript_162915.known	chr7	-	2271	5	FSM	ENSG00000075624.17	ENST00000477812.2	2271	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	13200.0008143939	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCCAAGTGTGACTTT	800	False	NA	-8	True	AATAAA	-17	NA	5530590	5527151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5529060_5529160_5529664_5530523
transcript_16292.known	chr1	+	3084	17	FSM	ENSG00000118217.7	ENST00000681001.1	3084	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.4308371315373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	161766319	161959658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778321_161778669_161778696_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_162921.nnic	chr7	+	2641	6	NNC	ENSG00000075618.18	novel	2784	5	NA	NA	-37	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	486.460440323774	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGGCCGGCCTGTGTG	NA	False	NA	26	True	AATAAA	-16	NA	5592778	5606649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271_5605849_5606022
transcript_162934.known	chr7	+	2784	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_2	70.1248885917119	9108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	1	True	NA	32	True	AATAAA	-22	NA	5592815	5606655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_16294.known	chr1	+	7470	16	FSM	ENSG00000118217.7	ENST00000367942.4	7470	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	8.4369557437634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTTATTCTGTATGTA	-3	True	NA	26	True	AATAAA	-16	NA	161766319	161964070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_162960.known	chr7	+	2215	4	FSM	ENSG00000075618.18	ENST00000473330.1	2215	4	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_1	80.8743881996437	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCGGCCTGTGTGTGTCT	4378	False	NA	31	True	AATAAA	-21	NA	5602871	5606654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5603414_5603495_5603618_5603862_5604031_5605271
transcript_162963.known	chr7	-	5639	17	FSM	ENSG00000011275.19	ENST00000425013.6	5639	17	0	0	0	0	multi-exon	FALSE	canonical	2	133	junction_1	42.5286668025227	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	NA	False	NA	-8	True	AATAAA	-19	NA	5781696	5620046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
transcript_162964.known	chr7	-	5777	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_14	49.5334088646239	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	22	False	5781685	-8	True	AATAAA	-19	NA	5781663	5620046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_162978.nic	chr7	-	1526	8	ISM	ENSG00000011275.19	ENST00000425013.6	5639	17	-25	105334	-25	4149	5prime_fragment	FALSE	canonical	3	135	junction_5	52.6955057526789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAGAAAACAAATG	NA	False	NA	15	True	ATTAAA	-38	NA	5781721	5725380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
transcript_162979.nic	chr7	-	1697	8	ISM	ENSG00000011275.19	ENST00000389902.8	5777	17	-58	105334	-25	4149	5prime_fragment	FALSE	canonical	3	84	junction_5	65.1168494449221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAGAAAACAAATG	NA	False	NA	15	True	ATTAAA	-38	NA	5781721	5725380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_16298.known	chr1	+	2811	15	FSM	ENSG00000118217.7	ENST00000681169.1	2811	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	23.1843763367154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCCAGCCTGGGCGACA	-3	True	NA	NA	False	NA	NA	NA	161766319	161959632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_162994.known	chr7	+	2379	15	FSM	ENSG00000122674.12	ENST00000325974.9	2379	15	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_8	306.421153756375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	-2	True	NA	NA	False	NA	NA	NA	5898732	5926550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5898920_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_16300.known	chr1	+	3032	16	FSM	ENSG00000118217.7	ENST00000681557.1	3032	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.1584195184484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	161766341	161959658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778317_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_163003.known	chr7	+	2062	3	FSM	ENSG00000122674.12	ENST00000478672.1	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	2018	junction_2	178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	3	True	NA	NA	False	NA	NA	NA	5898780	5902297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5898920_5900283_5900382_5900472
transcript_163007.known	chr7	-	2765	15	FSM	ENSG00000122512.16	ENST00000642456.1	2765	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_14	24.5083284469852	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTGATCTTGAGAA	12	True	NA	-38	True	AATACA	-12	NA	6009075	5973273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006027_6008996
transcript_16301.known	chr1	+	2974	15	FSM	ENSG00000118217.7	ENST00000680462.1	2974	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	23.1900972883879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATGCTTGGTCTTCTT	-2	True	NA	NA	False	AATAAA	-3	NA	161766320	161865955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161864740
transcript_163017.known	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_8	41.9160969518092	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	11	False	6059186	NA	False	AATAAA	-25	NA	6059175	6022246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_163024.nic	chr7	-	1006	9	ISM	ENSG00000086232.13	ENST00000199389.11	4411	15	-56	18906	-56	0	5prime_fragment	FALSE	canonical	3	602	junction_2	41.8880576656402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAAAACGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	6059231	6041152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_163028.known	chr7	-	791	5	FSM	ENSG00000086232.13	ENST00000463213.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_4	13.9552857369529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTTGGCCAGGATGGT	130	False	NA	NA	False	AATAGA	-12	NA	6059056	6046722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_163029.known	chr7	+	1198	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_3	30.5068298363935	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	-9	True	NA	28	True	AATAAA	-17	NA	6009271	6023834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
transcript_16303.nnic	chr1	+	5752	12	Fusion	ENSG00000239887.6_ENSG00000198929.13	novel	5016	10	NA	NA	-48	0	multi-exon	FALSE	canonical	3	20	junction_3	15.4170668550546	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTTTGTCTGTTT	NA	False	NA	14	True	AATAAA	-15	NA	162069642	162386812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_162070283_162154404_162154477_162287343_162287437_162300632_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051_162367205_162381890_162382219_162383181
transcript_163030.nnic	chr7	+	1117	4	NIC	ENSG00000106305.10	novel	1198	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_1	253.536322184153	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	-48	True	NA	28	True	AATAAA	-17	NA	6009232	6023834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_6009379_6015145_6015353_6017813_6018046_6023302
transcript_163032.known	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	242	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	35	True	NA	-59	True	TTTAAA	-36	NA	6009315	6023747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6009499_6017813_6018046_6023302
transcript_163036.known	chr7	+	5155	18	FSM	ENSG00000106346.12	ENST00000306177.10	5090	18	-65	0	-65	0	multi-exon	FALSE	canonical	3	101	junction_14	19.5959179422654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCGTCTTTTTACTG	-50	True	NA	23	True	TATAAA	-16	NA	6104883	6161564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753_6157056_6159449_6159494_6160554
transcript_163041.known	chr7	+	4286	16	FSM	ENSG00000106346.12	ENST00000479544.6	4286	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_14	20.2381378150813	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGACTTTGCCTTGCA	41	True	NA	NA	False	NA	NA	NA	6104974	6157331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753
transcript_163048.known	chr7	-	4482	13	FSM	ENSG00000008256.16	ENST00000350796.8	4482	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	12.3319255953354	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTAAGACTTGGTTCT	2	True	NA	NA	False	AATAAA	-21	NA	6272624	6161778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170534_6170647_6170829_6170979_6171201_6171315_6173652_6173734_6177822_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
transcript_16305.nnic	chr1	+	5737	12	Fusion	ENSG00000239887.6_ENSG00000198929.13	novel	1732	11	NA	NA	-48	0	multi-exon	FALSE	canonical	3	27	junction_3	13.797232924164	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTTTGTCTGTTT	NA	False	NA	14	True	AATAAA	-15	NA	162069642	162386812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_162070283_162154404_162154477_162287343_162287437_162300647_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051_162367205_162381890_162382219_162383181
transcript_163054.known	chr7	-	4508	13	FSM	ENSG00000008256.16	ENST00000396741.3	4508	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	24.6722966547953	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAGACTTGGTTCTTTA	-18	True	NA	NA	False	AATAAA	-24	NA	6272644	6161775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170531_6170647_6170829_6170979_6171201_6171315_6173652_6173734_6177822_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
transcript_163055.known	chr7	-	207	2	FSM	ENSG00000286075.2	ENST00000578372.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTCCCAGACTGACGA	185	False	NA	NA	False	NA	NA	NA	6348758	6331214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6331236_6348572
transcript_163056.known	chr7	-	558	2	FSM	ENSG00000178397.13	ENST00000530143.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGAGTGTTTTGCTCG	-32	True	NA	NA	False	NA	NA	NA	6348975	6330827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6331236_6348825
transcript_163057.known	chr7	+	907	7	FSM	ENSG00000136238.18	ENST00000356142.4	907	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1310.84675771893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAACAA	13	True	NA	-14	True	AAAACA	-8	NA	6374538	6402520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6398661_6398719_6400125_6400189_6401867_6402028_6402315
transcript_163058.known	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	2693	junction_1	50.6201540890582	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	1	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
transcript_163065.known	chr7	-	2839	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_11	15.5169426822452	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGTGTACAGCTGC	1	True	NA	-14	True	AATAAA	-16	NA	6447954	6409128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
transcript_16307.known	chr1	+	5016	10	FSM	ENSG00000198929.13	ENST00000361897.10	5016	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	16.7383643019912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTTTCCATTGTCTTT	-26	True	NA	NA	False	AATAAA	-16	NA	162069690	162370475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162070283_162154404_162154477_162287343_162287437_162300632_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051
transcript_16308.known	chr1	+	2894	10	FSM	ENSG00000198929.13	ENST00000530878.5	2894	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	14.8855717697904	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAGAAAGAAAAAA	-9	True	NA	NA	False	NA	NA	NA	162069773	162368451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162070283_162154404_162154477_162287343_162287437_162300647_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051
transcript_163085.known	chr7	-	2044	13	FSM	ENSG00000164535.15	ENST00000425398.6	2044	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	39.7037641652387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCACCCAGAAGACCGT	21	True	NA	NA	False	NA	NA	NA	6447934	6409516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6432836_6432960_6436361_6436534_6445952_6446105_6447747
transcript_16309.nic	chr1	+	804	3	ISM	ENSG00000198929.13	ENST00000430120.3	1732	11	-447	80057	-48	-79786	5prime_fragment	FALSE	canonical	3	58	junction_2	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTGGCTCTGAACCAG	NA	False	NA	NA	False	AAGAAA	-3	NA	162069642	162287435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_162070283_162154404_162154477_162287343
transcript_16310.nnic	chr1	+	5649	12	Fusion	ENSG00000239887.6_ENSG00000198929.13	novel	1732	11	NA	NA	40	0	multi-exon	FALSE	canonical	3	27	junction_3	13.797232924164	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTTTGTCTGTTT	14	True	NA	14	True	AATAAA	-15	NA	162069730	162386812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_162070283_162154404_162154477_162287343_162287437_162300647_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051_162367205_162381890_162382219_162383181
transcript_16311.known	chr1	+	8524	8	FSM	ENSG00000152332.16	ENST00000489294.2	8524	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	6.65168384389875	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCTATACTTAGTATA	-20	True	NA	35	True	AATAAA	-36	NA	162497817	162529631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162498269_162499954_162500248_162500912_162501105_162503753_162503849_162512499_162512577_162512724_162512824_162518101_162518191_162522403
transcript_163116.known	chr7	-	2786	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_2	52.7019923722054	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	9	True	NA	-11	True	AATAAA	-18	NA	6484152	6461088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
transcript_163122.known	chr7	-	655	4	FSM	ENSG00000136240.10	ENST00000490996.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	513.182445356641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGGATAGTTCCAAAAG	104	False	NA	-30	True	AATAAA	-17	NA	6484057	6462871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6463176_6469595_6469755_6474183_6474285_6483966
transcript_163128.known	chr7	-	382	2	FSM	ENSG00000136240.10	ENST00000462052.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	1108	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTAATATGCTGTTC	18	True	NA	NA	False	ATTAAA	-14	NA	6484143	6474079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6474285_6483966
transcript_163135.nic	chr7	+	1537	9	NIC	ENSG00000136247.15	novel	1461	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	134.987730923962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGCTTGTTTGTTTTGA	-32	True	NA	20	True	NA	NA	NA	6577420	6588976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_6577499_6577589_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163138.known	chr7	+	1461	9	FSM	ENSG00000136247.15	ENST00000396707.6	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	114.197676749573	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	-19	True	NA	22	True	NA	NA	NA	6577433	6588978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163141.known	chr7	+	1706	8	FSM	ENSG00000136247.15	ENST00000335965.11	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	78.260944986654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	1	True	NA	NA	False	NA	NA	NA	6577453	6589374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163145.nic	chr7	+	1372	8	NIC	ENSG00000136247.15	novel	1706	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	136.559622920704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGCTTGTTTGTTTTGA	-37	True	NA	20	True	NA	NA	NA	6577415	6588976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163146.known	chr7	+	1348	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	118.47810440959	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	-19	True	NA	19	True	AAGAAA	-31	NA	6577433	6588931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163149.known	chr7	+	1552	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	74.6223143296854	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	-19	True	NA	22	True	NA	NA	NA	6577433	6588978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163152.known	chr7	+	1485	8	FSM	ENSG00000136247.15	ENST00000396709.5	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	135.010506015991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTTTGAGCTGTAGT	15	True	NA	7	True	AAGAAA	-19	NA	6577467	6588919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577721_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163153.known	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	111.987061934923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	52	False	NA	NA	False	NA	NA	NA	6577504	6589374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_163157.known	chr7	+	807	7	FSM	ENSG00000136247.15	ENST00000483589.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	121.665410952424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGCTCTCGTGAC	28	True	NA	NA	False	NA	NA	NA	6577480	6583431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_163163.known	chr7	+	1604	6	FSM	ENSG00000136247.15	ENST00000474097.5	1604	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	147.960805620948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGTACAGTTGAAAAA	15	True	NA	NA	False	ACTAAA	-36	NA	6577467	6584320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_163173.nic	chr7	+	2321	7	NIC	ENSG00000146576.13	novel	2178	6	NA	NA	-85	-1	intron_retention	FALSE	canonical	3	26	junction_6	33.9296658135948	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTAGACTTTATGGAAT	NA	False	NA	21	True	AATAAA	-14	NA	6589935	6608723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607536_6607598_6607959
transcript_163183.known	chr7	+	2178	6	FSM	ENSG00000146576.13	ENST00000344417.10	2178	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	14.0285423334001	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	7	True	NA	24	True	AATAAA	-17	NA	6590020	6608726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607959
transcript_16319.known	chr1	+	2377	11	FSM	ENSG00000117143.13	ENST00000271469.7	2377	11	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_8	29.3216643456677	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGTACTTGAAGAAATTA	-18	True	NA	26	True	AATAAA	-26	NA	162561505	162599842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592731_162592783_162597791_162597859_162599270
transcript_163190.nnic	chr7	+	2119	6	NNC	ENSG00000146576.13	novel	1762	7	NA	NA	-50	0	intron_retention	FALSE	canonical	1	2	junction_1	40.306823243714	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGACTTTATGGAATG	0	True	NA	22	True	AATAAA	-15	NA	6589970	6608724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_6590476_6591752_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607959
transcript_16320.known	chr1	+	2294	10	FSM	ENSG00000117143.13	ENST00000367926.8	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	59.6280653118941	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTTGTACTTGAAGA	9	True	NA	21	True	AATAAA	-21	NA	162561532	162599837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162597791_162597859_162599270
transcript_163200.known	chr7	-	5075	5	FSM	ENSG00000164631.19	ENST00000405858.6	5075	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	6.72681202353685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGGCATTTTCTTCTT	-18	True	NA	0	True	AGTAAA	-19	NA	6706947	6688432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
transcript_163202.known	chr7	-	322	3	FSM	ENSG00000164631.19	ENST00000491565.1	322	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGCACTTGGGCCAAG	393	False	NA	NA	False	NA	NA	NA	6706536	6704159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6704312_6705158_6705224_6706431
transcript_163213.known	chr7	-	1814	15	FSM	ENSG00000146574.16	ENST00000316731.13	1814	15	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	430.015193134534	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTGGTGTTGAGTC	965	False	NA	0	True	AATAAA	-20	NA	6826275	6798936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
transcript_163217.known	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1995	junction_1	181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	8	True	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6824549_6824639_6824738_6826077
transcript_163218.known	chr7	-	545	2	FSM	ENSG00000146574.16	ENST00000486840.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	2357	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAGGAAAGTTCTCTG	968	False	NA	NA	False	NA	NA	NA	6826272	6824387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6824738_6826077
transcript_163226.nnic	chr7	+	2207	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	203.728219694769	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	-1	True	NA	28	True	AATAAA	-18	NA	7182543	7244350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_7182821_7215041_7215240_7234302_7234540_7238254_7238923_7243523
transcript_163229.known	chr7	+	6275	4	FSM	ENSG00000106392.11	ENST00000436587.7	6275	4	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	43.4383343245213	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	-1	True	NA	16	True	AATAAA	-15	NA	7182543	7248616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523
transcript_163233.nnic	chr7	+	2574	4	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	199.419156552223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	9	True	NA	28	True	AATAAA	-18	NA	7182553	7244350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_7183396_7234302_7234540_7238254_7238923_7243523
transcript_163237.known	chr7	+	4877	13	FSM	ENSG00000164654.16	ENST00000340080.9	4877	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	96.7750470019117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTATGTCTCTGG	-32	True	NA	NA	False	NA	NA	NA	7566883	7608932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7567073_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_163242.known	chr7	+	3095	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	97.4089954608619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	-41	True	NA	9	True	AATAAA	-14	NA	7566874	7607223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_163247.nic	chr7	+	3002	11	NIC	ENSG00000164654.16	novel	3095	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	79.1646385705133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	-46	True	NA	9	True	AATAAA	-14	NA	7566869	7607223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_163248.nic	chr7	+	3207	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	-38	258	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	79.1646385705133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTCTGTGATTCAG	7	True	NA	6	True	AATAAA	-24	NA	7566922	7607481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_163254.known	chr7	-	1578	3	FSM	ENSG00000272894.5	ENST00000609497.5	1578	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTACCATGCACGATT	11	True	NA	-14	True	ATTAAA	-22	NA	7566996	7552461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_7552923_7555155_7555190_7565913
transcript_163256.known	chr7	+	2157	4	FSM	ENSG00000219545.12	ENST00000636849.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.1682057859982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATTTTTGATTA	33	True	NA	-4	True	AATAAA	-8	NA	7640775	7879185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7640822_7673321_7673454_7801669_7801744_7877280
transcript_163257.known	chr7	+	569	4	FSM	ENSG00000219545.12	ENST00000482067.3	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	44.2141254452566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	51	False	NA	NA	False	AATAAA	-18	NA	7640793	7968020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7967698
transcript_163258.known	chr7	-	847	5	FSM	ENSG00000106399.11	ENST00000396682.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	954.033804432526	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGAGAGATTTCTGTGC	13	True	NA	-32	True	ATTAAA	-27	NA	7640972	7636931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640319_7640582_7640722
transcript_163259.known	chr7	-	434	4	FSM	ENSG00000106399.11	ENST00000406109.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_3	1012.05083315458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGATTTCTGTGCTTTCT	169	False	NA	-27	True	ATTAAA	-32	NA	7640816	7636926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640722
transcript_163264.known	chr7	+	4741	8	FSM	ENSG00000106415.13	ENST00000223145.10	4741	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	31.4525882261293	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCACACATGTTTTTGG	-4	True	NA	14	True	AATAAA	-20	NA	7968795	8089080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7969808_8003907_8004060_8022482_8022570_8055432_8055550_8060095_8060249_8070920_8071132_8084896_8085018_8086192
transcript_16327.known	chr1	+	1528	9	FSM	ENSG00000132196.16	ENST00000254521.8	1528	9	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_7	15.8464309861874	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTTCCTTTTGGAA	NA	False	NA	1	True	AATAAA	-19	NA	162790701	162812823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162790836_162792658_162792863_162796584_162796678_162797801_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_163272.known	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	104.561354826135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	474	False	NA	-34	True	NA	NA	NA	8262206	8113254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
transcript_163273.known	chr7	-	2440	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	39.6841076801138	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGTTTATGGAGTC	68	False	NA	34	True	ATTAAA	-22	NA	8262612	8113186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_163274.nnic	chr7	-	1990	14	NIC	ENSG00000003147.19	novel	1956	15	NA	NA	61	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_13	97.2005186632374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	214	False	NA	-12	True	AATAAA	-37	NA	8262466	8113771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262093
transcript_163276.nic	chr7	-	1863	14	NIC	ENSG00000003147.19	novel	1956	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	94.2603093415238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-13	True	NA	-12	True	AATAAA	-37	NA	8262180	8113771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8261999
transcript_163290.known	chr7	-	1615	8	FSM	ENSG00000003147.19	ENST00000407906.5	1615	8	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_6	29.8253419160311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGATACGTGCACAGTG	68	False	NA	NA	False	ATTAAA	-21	NA	8262612	8156556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_163296.nic	chr7	-	1803	7	ISM	ENSG00000003147.19	ENST00000650486.1	2304	15	-8	44450	-8	-580	5prime_fragment	FALSE	canonical	3	72	junction_6	103.575120350186	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGACTAGGTTCCTTGTC	399	False	NA	NA	False	NA	NA	NA	8262281	8157695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262093
transcript_163297.nic	chr7	-	1789	7	ISM	ENSG00000003147.19	ENST00000407906.5	1615	8	-1	1139	-1	-580	5prime_fragment	FALSE	canonical	3	293	junction_5	32.170120712653	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGACTAGGTTCCTTGTC	67	False	NA	NA	False	NA	NA	NA	8262613	8157695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_163299.known	chr7	+	429	2	FSM	ENSG00000244239.1	ENST00000458624.1	429	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATGTATAGGTATA	-7	True	NA	20	True	AATAAA	-19	NA	8262232	8262821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_8262420_8262579
transcript_163300.known	chr7	+	1953	1	FSM	ENSG00000122584.13	ENST00000602349.2	1953	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTACTTGTGTAAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	8751006	8752959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_8751000_8753000
transcript_163302.known	chr7	-	2035	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	11218	junction_2	589.835570307522	1840	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTTCTAGAATTGAG	5	True	NA	NA	False	AATAAA	-23	NA	10940153	10931942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
transcript_163303.known	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	23.9883189566668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	-24	True	NA	12	True	AATAAA	-17	NA	10973871	11169618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_163304.known	chr7	+	2627	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	44.2658428559764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	-7	True	NA	17	True	AATAAA	-22	NA	10973888	11169623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_163309.nic	chr7	+	1298	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-579	80511	-8	-32658	5prime_fragment	FALSE	canonical	3	148	junction_2	16.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAGAAGAAAATG	-7	True	NA	20	True	ATTAAA	-9	NA	10973327	10982561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_163310.nic	chr7	+	1364	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-579	80445	-8	-32592	5prime_fragment	FALSE	canonical	3	148	junction_2	16.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGGAGAAAGAGAAGG	-7	True	NA	-18	True	AAAAAG	-24	NA	10973327	10982627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_163315.known	chr7	+	12351	8	FSM	ENSG00000106460.19	ENST00000396668.8	12351	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	23.2071417579035	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTATTTATATCAG	10	True	NA	NA	False	AATAAA	-18	NA	12211293	12243367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
transcript_163328.known	chr7	-	5220	29	FSM	ENSG00000146530.15	ENST00000275358.8	5220	29	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_19	16.3888884084707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	-5	True	NA	0	True	AATAAA	-23	NA	12403865	12330884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372976_12373248_12374688_12374763_12375009_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
transcript_163331.known	chr7	-	5936	30	FSM	ENSG00000146530.15	ENST00000452576.6	5936	30	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	20.9417401469052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAATAAACTGAATATT	NA	False	NA	-33	True	NA	NA	NA	12403941	12330917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12353814_12354488_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372976_12373248_12374688_12374763_12375009_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
transcript_163332.known	chr7	-	1394	8	FSM	ENSG00000146530.15	ENST00000326715.4	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	25.6729827019832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATAGT	175	False	NA	NA	False	NA	NA	NA	12403724	12377563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12388807_12388958_12389126_12389359_12393593_12393779_12403658
transcript_163337.known	chr7	+	9682	16	FSM	ENSG00000006747.15	ENST00000297029.10	9682	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	3.04338992280355	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	-1	True	NA	NA	False	AATAAA	-22	NA	12570719	12660182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12570986_12578063_12578219_12581059_12581222_12604513_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644137_12644316_12644583_12644706_12649466_12649545_12651840_12651902_12652587
transcript_163339.known	chr7	+	1144	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	24	True	NA	13	True	AATAAA	-14	NA	12686907	12689176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12687044_12688168
transcript_163344.known	chr7	+	840	2	FSM	ENSG00000122644.13	ENST00000404894.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGAGTGTCTACAGCG	2	True	NA	NA	False	NA	NA	NA	12687634	12688914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12687729_12688168
transcript_163346.known	chr7	+	1296	3	FSM	ENSG00000122644.13	ENST00000396662.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	17.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGTTTTGTGCTTAC	-28	True	NA	16	True	AATAAA	-17	NA	12686855	12689179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12687044_12687634_12687729_12688165
transcript_163347.known	chr7	-	6459	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	35	junction_13	50.5300894599287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	6	True	NA	-1	True	AATAAA	-18	NA	13989666	13891228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_163351.known	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	1	50	junction_4	41.3671736471753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	1490	False	NA	-11	True	TTTAAA	-6	NA	13989947	13894380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_163354.known	chr7	-	4181	12	FSM	ENSG00000006468.14	ENST00000405358.8	4181	12	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_11	54.1056511614388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	4	True	NA	-6	True	AATAAA	-24	NA	13988873	13893267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988679
transcript_163358.known	chr7	-	1758	2	FSM	ENSG00000171243.8	ENST00000307068.5	1758	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATTTTTTTTTCTAAG	-2	True	NA	62	True	AATAAA	-14	NA	16465738	16461480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_16462964_16465463
transcript_163360.known	chr7	-	2489	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	9.31081940672739	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCATCTTGTTTTATAA	7	True	NA	-18	True	AATAAA	-20	NA	16645754	16599778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_163363.known	chr7	+	1804	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	59.9545282238586	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	13	True	NA	17	True	AATAAA	-15	NA	16646180	16706517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_163365.known	chr7	+	1405	11	FSM	ENSG00000136261.16	ENST00000415365.5	1405	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	145.100103376945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGTATGATTCTGTT	NA	False	NA	14	True	AAGAAA	-25	NA	16646130	16704662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546
transcript_163366.known	chr7	+	1711	11	FSM	ENSG00000136261.16	ENST00000437745.5	1711	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	208.983635722991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	-8	True	NA	23	True	AATAAA	-21	NA	16646159	16706523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_163370.known	chr7	+	1873	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_5	27.9814224084481	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	-12	True	NA	20	True	ATTAAA	-30	NA	16753754	16784536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
transcript_163371.known	chr7	-	6357	26	FSM	ENSG00000071189.21	ENST00000428135.7	6357	26	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_19	16.9802709047883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGAGTTCATTTAA	-2	True	NA	-24	True	AATAAA	-14	NA	17940494	17790760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_163378.known	chr7	-	4146	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56.687211961782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATCATTACTTTTC	8	True	NA	NA	False	AATAAA	-28	NA	17940484	17879426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_163379.known	chr7	+	2420	1	FSM	ENSG00000279048.1	ENST00000625121.1	2420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTTGGTGTTGAAAG	711	False	NA	NA	False	ATTAAA	-14	NA	17940502	17942922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_17940500_17942900
transcript_163380.known	chr7	+	4239	12	FSM	ENSG00000048052.24	ENST00000405010.7	4239	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	23.2304303137498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	-4	True	NA	16	True	AATAAA	-16	NA	18495745	18668843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_163382.known	chr7	+	2359	11	FSM	ENSG00000048052.24	ENST00000428307.6	2359	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	22.280260321639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATATAGATGCAAA	6	True	NA	NA	False	AATACA	-7	NA	18495755	18667105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_163383.known	chr7	+	4279	11	FSM	ENSG00000048052.24	ENST00000622668.4	4279	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	17.1770195319211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCCCTTTCATACA	-4	True	NA	10	True	AATAAA	-10	NA	18495745	18668837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_18496024_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_163384.known	chr7	-	3893	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	50.3940031705714	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGCCTCTGATGTGA	4	True	NA	-3	True	AATAAA	-21	NA	19709037	19695460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
transcript_16340.known	chr1	-	851	5	FSM	ENSG00000143248.13	ENST00000530507.5	851	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	404.698962192887	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATATCTTCAGCTTGT	212	False	NA	-45	True	NA	NA	NA	163202903	163147116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_163147504_163152537_163152717_163161914_163161977_163168257_163168369_163202791
transcript_163421.known	chr7	+	483	1	FSM	ENSG00000213860.4	ENST00000396599.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	43	False	NA	NA	False	NA	NA	NA	20002764	20003247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_20002800_20003200
transcript_163424.known	chr7	+	740	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	50	8	9	-5	multi-exon	FALSE	canonical	3	17	junction_1	11.1579568022107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAATATATGTGTATG	15	False	NA	NA	False	ATTAAA	-23	NA	20217585	20221692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
transcript_163426.known	chr7	+	667	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	41	19	0	-16	multi-exon	FALSE	canonical	3	17	junction_2	11.5758369027902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	6	True	NA	NA	False	ATTAAA	-12	NA	20217576	20221681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
transcript_163427.known	chr7	-	666	4	FSM	ENSG00000271133.6	ENST00000603156.2	924	4	30	228	30	-228	multi-exon	FALSE	canonical	3	8	junction_2	6.64997911442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAACTCTCTGAAAG	8	True	NA	60	True	NA	NA	NA	20331747	20328528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20328857_20329366_20329514_20329689_20329783_20331649
transcript_163429.known	chr7	-	737	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	100	3	96	2	multi-exon	FALSE	canonical	3	13	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTGATTAATTTGT	122	False	NA	NA	False	AATAAA	-20	NA	20331681	20328298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20328857_20329366_20329514_20331649
transcript_163432.known	chr7	-	1714	3	FSM	ENSG00000164651.18	ENST00000361443.4	1714	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCGCCCGCCCCTC	10	True	NA	NA	False	NA	NA	NA	20786886	20784286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20785796_20785947_20786044_20786777
transcript_163433.known	chr7	-	3496	3	NNC	ENSG00000164651.18	novel	1714	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGCCAGTTAATTTGTA	10	True	NA	-8	True	AATAAA	-13	NA	20786886	20782282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_20785329_20785454_20785796_20786777
transcript_163436.known	chr7	-	3626	2	FSM	ENSG00000164651.18	ENST00000418710.3	3626	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTTAATTTGTATTTT	10	True	NA	-4	True	AATAAA	-17	NA	20786886	20782278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20785796_20786777
transcript_163438.known	chr7	+	5637	6	FSM	ENSG00000105866.15	ENST00000649633.1	5637	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	36.1530081735946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACTTGTAAATTTT	-3	True	NA	21	True	TATAAA	-14	NA	21428200	21514505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_21428259_21428681_21428793_21429288_21430844_21477078_21477308_21481923_21482124_21511021
transcript_16344.known	chr1	+	1842	14	FSM	ENSG00000143228.13	ENST00000367900.7	1842	14	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	43.5309860393965	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGTTTTGTTTATT	0	True	NA	43	True	AATATA	-24	NA	163321934	163355764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_163440.known	chr7	+	4293	5	FSM	ENSG00000105866.15	ENST00000448246.1	4293	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.3935479074943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAATCCAGAAAAAAAC	5	True	NA	70	True	AATGAA	-7	NA	21428043	21514554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_21428259_21428676_21428793_21477078_21477308_21481923_21482124_21511021
transcript_163442.nic	chr7	+	1936	6	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-21	336928	-21	3465	5prime_fragment	FALSE	canonical	3	28	junction_1	4.58693797647189	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGACCACCTT	NA	False	NA	NA	False	NA	NA	NA	21543017	21564911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185
transcript_163444.known	chr7	-	2915	11	FSM	ENSG00000164649.20	ENST00000356195.9	2915	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	414.930307401135	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCTTGTCAGTGGTA	22	True	NA	-3	True	AATAAA	-25	NA	21945878	21900899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21940261_21940316_21945780
transcript_163449.nic	chr7	-	3179	10	NIC	ENSG00000164649.20	novel	2883	10	NA	NA	-295	0	combination_of_known_junctions	FALSE	canonical	3	474	junction_8	202.479872494606	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	3052	False	NA	-2	True	AATAAA	-26	NA	21946198	21900898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911752_21916753_21916895_21945780
transcript_16345.known	chr1	+	1964	14	FSM	ENSG00000143228.13	ENST00000271452.8	1964	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	30.8918709745411	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	-29	True	NA	38	True	AGTAAA	-45	NA	163321953	163355759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_163450.known	chr7	-	2883	10	FSM	ENSG00000164649.20	ENST00000406877.8	2883	10	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_8	154.38631999782	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	1	True	NA	-2	True	AATAAA	-26	NA	21945899	21900898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21945780
transcript_163454.known	chr7	-	1830	9	FSM	ENSG00000164649.20	ENST00000373934.4	1830	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_7	328.992021179846	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGGGGACCATCAACA	16	True	NA	NA	False	ATTAAA	-11	NA	21945884	21901798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21916753_21916895_21945780
transcript_163468.nic	chr7	-	647	4	NIC	ENSG00000164649.20	novel	569	5	NA	NA	-19	-78	combination_of_known_junctions	FALSE	canonical	3	474	junction_2	283.25763694716	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTCTTGAAAGAAAGAAA	-22	True	NA	14	True	NA	NA	NA	21945922	21908278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_21908508_21911616_21911752_21916753_21916895_21945780
transcript_163469.nic	chr7	-	816	4	ISM	ENSG00000164649.20	ENST00000406877.8	2883	10	-189	7380	-185	-78	5prime_fragment	FALSE	canonical	3	649	junction_2	204.195984289604	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTCTTGAAAGAAAGAAA	3162	False	NA	14	True	NA	NA	NA	21946088	21908278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_21908508_21911616_21911755_21916753_21916895_21945780
transcript_163472.known	chr7	-	1261	5	FSM	ENSG00000105889.16	ENST00000678116.1	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	10.7354552767919	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-11	True	NA	-36	True	ATTAAA	-18	NA	22500188	22419443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_163473.known	chr7	+	2432	4	FSM	ENSG00000232759.1	ENST00000435127.1	2432	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTGTTCATTCATTTA	9	True	NA	NA	False	ATTAAA	-17	NA	22563336	22573996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22563431_22564965_22565153_22571774_22572014_22572084
transcript_163475.known	chr7	-	434	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	5429	junction_2	46	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGAGTCTTTTTTG	-7	True	NA	-5	True	AATAAA	-15	NA	22822849	22812973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22813186_22817999_22818049_22822676
transcript_163477.known	chr7	-	731	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGGCGGCTCTGTTGC	-7	True	NA	NA	False	AATAAA	-1	NA	22822849	22812627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22813186_22822676
transcript_163478.known	chr7	+	1063	6	FSM	ENSG00000228649.10	ENST00000661147.1	1063	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	6.8585712797929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	NA	False	NA	NA	False	AATATA	-33	NA	22854199	22861436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546_22860639_22860885
transcript_163479.known	chr7	+	747	5	FSM	ENSG00000228649.10	ENST00000663057.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.66077672302228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	-3	True	NA	NA	False	AATATA	-33	NA	22854255	22861436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546_22860639_22860885
transcript_163480.known	chr7	+	619	3	FSM	ENSG00000228649.10	ENST00000671680.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATAGTCTTTTTTTTTT	504	False	NA	NA	False	NA	NA	NA	22854762	22857354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854965_22856521_22856557_22856972
transcript_163481.known	chr7	+	1743	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	14	True	AATAAA	-20	NA	22854152	22858552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854281_22856521_22856557_22856972
transcript_163483.known	chr7	-	3130	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	58.6364341084848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAAATGTCTTTCTT	3	True	NA	53	True	ACTAAA	-38	NA	23014084	22944508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_163489.nic	chr7	-	2349	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-31	286	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	86.7214596870229	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTATGTCTCATGTGA	NA	False	NA	-14	True	AATAAA	-23	NA	23014161	22945285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_163497.known	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	44.0983748755741	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	50	False	NA	-3	True	AATAAA	-24	NA	23014074	22978163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
transcript_163498.known	chr7	-	3578	3	FSM	ENSG00000230658.2	ENST00000662806.1	3578	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGACTGCAGAATGAAA	-15	True	NA	NA	False	NA	NA	NA	23105703	23100213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23103579_23104249_23104318_23105558
transcript_163500.known	chr7	+	3165	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	266.58039582463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	-28	True	NA	5	True	AATAAA	-15	NA	23105757	23175302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_163503.known	chr7	+	5619	11	FSM	ENSG00000122550.18	ENST00000339077.10	5619	11	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_8	192.954631973425	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTATATTCCTTTTGC	-1	True	NA	NA	False	AATAAA	-16	NA	23105784	23177914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_163507.known	chr7	+	3231	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	248.730697743564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGATAATATTAAATATT	19	False	NA	-15	True	AATGAA	-31	NA	23106294	23175388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_163511.nic	chr7	+	1749	8	NIC	ENSG00000122550.18	novel	5619	11	NA	NA	-24	342	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	298.434213172412	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTTTATTTGGAT	0	True	NA	0	True	AATAAA	-13	NA	23105733	23156510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23155990
transcript_163515.nic	chr7	+	1155	6	NIC	ENSG00000122550.18	novel	3165	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	394.191019684619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGCATCACTACTCTT	0	True	NA	10	True	AATAAA	-20	NA	23105733	23126049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_163518.known	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_4	219.679738483093	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	-1	True	NA	6	True	AATAAA	-16	NA	23105784	23126045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_163519.known	chr7	+	588	5	FSM	ENSG00000122550.18	ENST00000479700.1	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	383.346775126647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCCAAGACCCCCAGTGA	-4	True	NA	NA	False	AATGAA	-44	NA	23106655	23125887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_163525.known	chr7	+	1329	8	FSM	ENSG00000136243.18	ENST00000413919.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	56.6435326927829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTAAAGCCTCCACCTC	30	True	NA	NA	False	AAGAAA	-18	NA	23182063	23200705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197248_23199457_23199543_23200167
transcript_163527.known	chr7	+	1571	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	16.6474889664745	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	14	True	NA	18	True	AATAAA	-18	NA	23182047	23201006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_163528.known	chr7	+	2010	7	FSM	ENSG00000136243.18	ENST00000485250.5	2010	7	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	47.1996351210002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATGGAACTGAAAAAT	-3	True	NA	-33	True	AAAAAG	-44	NA	23181840	23200955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182490_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_16353.known	chr1	+	1845	13	FSM	ENSG00000143228.13	ENST00000524800.5	1845	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	75.3169229913762	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTGAAATATATATATT	NA	False	NA	6	True	AGTAAA	-13	NA	163321899	163355727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163347762_163347939_163348944_163349081_163355334
transcript_163531.known	chr7	+	1285	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	49.0118353053627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTATGCACGAATA	32	True	NA	-21	True	NA	NA	NA	23182065	23200967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_163535.known	chr7	+	739	3	FSM	ENSG00000136243.18	ENST00000497500.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTTGATTCCCTGTATG	4	True	NA	NA	False	AATAAA	-19	NA	23182037	23187392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182207_23185069_23185299_23187051
transcript_163539.known	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_8	12.6474971307951	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-7	True	NA	-4	True	AATAAA	-22	NA	23470491	23310208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_163555.nic	chr7	-	1816	13	ISM	ENSG00000136231.14	ENST00000258729.8	4274	15	-2	3407	-2	-1243	5prime_fragment	FALSE	canonical	3	130	junction_6	13.2442335460465	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTTAGTCCTAAAGAAG	-9	True	NA	NA	False	ATTAAA	-9	NA	23470493	23313615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_16356.known	chr1	+	779	4	FSM	ENSG00000143228.13	ENST00000487578.2	779	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	41.6999866773227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTGAGTTCTTAAAA	3	True	NA	NA	False	NA	NA	NA	163321985	163328561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227
transcript_163562.nnic	chr7	-	3193	12	NIC	ENSG00000136231.14	novel	4274	15	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	45.3119581757289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTAGACTC	-9	True	NA	NA	False	GATAAA	-3	NA	23470493	23311126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23468481_23468543_23469935
transcript_163565.nic	chr7	-	1931	12	ISM	ENSG00000136231.14	ENST00000258729.8	4274	15	-154	7429	-154	55	5prime_fragment	FALSE	canonical	3	130	junction_5	10.4129607732919	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTCTAGAGTATGTG	6119	False	NA	NA	False	NA	NA	NA	23470645	23317637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_163574.nic	chr7	-	2346	7	ISM	ENSG00000136231.14	ENST00000258729.8	4274	15	-136	36380	-136	1042	5prime_fragment	FALSE	canonical	3	139	junction_1	9.01849950564579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGCCCACCATCTATT	6137	False	NA	NA	False	AAAAAG	-10	NA	23470627	23346588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_163579.nnic	chr7	-	3500	8	NIC	ENSG00000136231.14	novel	4274	15	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	55.7384562954885	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTGTTGTGTAGTATG	-2	True	NA	-7	True	AATAAA	-19	NA	23470486	23310211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23469935
transcript_163582.known	chr7	+	2905	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	42.6015127535266	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTATATAAAATTTT	8	True	NA	NA	False	TTTAAA	-35	NA	23299338	23311729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
transcript_163586.known	chr7	+	892	1	FSM	ENSG00000232818.2	ENST00000439199.1	892	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTTATGCAAGAAAAAT	9827	False	NA	NA	False	NA	NA	NA	23490472	23491364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23490500_23491400
transcript_163587.known	chr7	-	2142	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	166.92419686792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-14	True	NA	-8	True	AATAAA	-15	NA	23532041	23504783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
transcript_163589.known	chr7	-	1931	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	175.91719465419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-14	True	NA	-8	True	AATAAA	-15	NA	23532041	23504783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
transcript_163592.known	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_7	52.0019622863662	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-2	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
transcript_1636.nnic	chr1	+	1168	5	NNC	ENSG00000287356.1	novel	4032	4	NA	NA	-115	-2062	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.06155281280883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGACACAAATGTGGTT	4976	False	NA	40	True	NA	NA	NA	2314924	2319261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_2315029_2315945_2315999_2316391_2317012_2317610_2317730_2318989
transcript_163600.known	chr7	+	847	5	FSM	ENSG00000169193.12	ENST00000448353.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	30.7520324531567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAGCCAACACCACCA	10	False	NA	NA	False	NA	NA	NA	23597514	23643024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23597966_23598052_23604085_23604280_23611170_23611554_23642930
transcript_163601.known	chr7	+	2470	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	9.46337971105226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTACAGTCTTTTT	-33	True	NA	60	True	AATAAA	-19	NA	23597381	23644708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
transcript_163603.known	chr7	+	625	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	41.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCATGTTTTTCTACT	1	True	NA	NA	False	AATAAA	-22	NA	23597415	23602220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23597966_23598052_23601870
transcript_163606.known	chr7	+	2324	3	FSM	ENSG00000169193.12	ENST00000409765.5	2324	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	22	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTACAGTCTTTT	27	True	NA	59	True	AATAAA	-18	NA	23597441	23644707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23611170_23611554_23642930
transcript_163613.known	chr7	+	1403	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	81.2679040102686	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	12	True	NA	22	True	AATAAA	-25	NA	23680198	23702650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_163616.known	chr7	+	761	6	FSM	ENSG00000188732.11	ENST00000409653.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	89.5021787444306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTGGAGAAATTAAAACC	-3	True	NA	NA	False	NA	NA	NA	23680183	23702167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_163617.known	chr7	+	888	6	FSM	ENSG00000188732.11	ENST00000409192.7	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	43.0785329369513	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTAAAACCATCATCC	NA	False	NA	NA	False	NA	NA	NA	23680129	23702174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_163618.known	chr7	+	1136	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	57.8937604582739	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	-3	True	NA	22	True	AATAAA	-25	NA	23680183	23702650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_163619.known	chr7	+	555	4	FSM	ENSG00000122585.8	ENST00000242152.7	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.71404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCCTCCTCAATGAAA	1	True	NA	5	True	AATAAA	-18	NA	24284189	24291862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24284276_24285240_24285429_24289498_24289580_24291662
transcript_16362.known	chr1	+	1459	8	FSM	ENSG00000185630.19	ENST00000367897.5	1459	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	40.8506488345544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGACTCCCGGGGTCCCCG	50	False	NA	-93	True	NA	NA	NA	164559822	164846955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
transcript_163621.known	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	45.6577277048864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	-6	True	NA	5	True	AATAAA	-18	NA	24573451	24694193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_163624.known	chr7	+	1703	11	FSM	ENSG00000105926.16	ENST00000409761.5	1703	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	88.1689287674519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAATTAAACTCTTAA	76	False	NA	-49	True	NA	NA	NA	24573414	24687632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24573594_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_163626.nic	chr7	+	1256	8	ISM	ENSG00000105926.16	ENST00000222644.10	8346	12	-189	28133	-5	0	5prime_fragment	FALSE	canonical	3	171	junction_1	52.6517243937238	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	8	True	NA	NA	False	AAAAAG	-6	NA	24573262	24666060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_163627.known	chr7	+	1191	8	FSM	ENSG00000105926.16	ENST00000430180.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	102.663110637241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	530	False	NA	NA	False	AAAAAG	-6	NA	24574012	24666060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_163629.known	chr7	+	982	5	FSM	ENSG00000105926.16	ENST00000432190.5	982	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	107.506685838603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTAATAAAATTTTTGG	13	True	NA	81	True	NA	NA	NA	24573267	24650712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24573594_24623662_24623785_24641715_24641869_24649611_24649765_24650484
transcript_16363.known	chr1	+	6062	6	FSM	ENSG00000185630.19	ENST00000612123.3	6062	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	45.0510821179692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTGTATTT	NA	False	NA	16	True	AATAAA	-17	NA	164792491	164851821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
transcript_163633.known	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.9013534101431	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-22	True	NA	-3	True	ATTAAA	-18	NA	24757464	24698354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_163634.known	chr7	-	2414	10	FSM	ENSG00000105928.16	ENST00000342947.9	2414	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	21.9297419101756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	20	True	NA	-3	True	ATTAAA	-18	NA	24757939	24698354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757706
transcript_163638.nic	chr7	-	2026	7	ISM	ENSG00000105928.16	ENST00000645220.1	2250	10	-134	8958	-123	0	5prime_fragment	FALSE	canonical	3	47	junction_6	11.0415880500346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCTTTATAAACC	5902	False	NA	-35	True	NA	NA	NA	24757598	24707312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_163639.known	chr7	-	1848	7	FSM	ENSG00000105928.16	ENST00000414428.2	1848	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.5120517668642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCTTTATAAACC	5769	False	NA	-35	True	NA	NA	NA	24757731	24707312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757706
transcript_16364.known	chr1	+	1517	1	FSM	ENSG00000271917.1	ENST00000607752.1	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATATGGCT	NA	False	NA	NA	False	AATAAA	-13	NA	164828435	164829952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_164828400_164830000
transcript_163642.known	chr7	-	1997	9	FSM	ENSG00000105928.16	ENST00000409970.6	1997	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	21.5779835712237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTATTCTATTAAAGGA	6025	False	NA	-37	True	NA	NA	NA	24757475	24698388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24757395
transcript_163643.known	chr7	-	1501	4	FSM	ENSG00000105928.16	ENST00000493723.5	1501	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	9.67241208569794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGAAGTTTTTTAG	8166	False	NA	NA	False	NA	NA	NA	24749793	24716468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24717375_24719046_24719219_24744561_24744755_24749563
transcript_163645.known	chr7	-	6749	23	FSM	ENSG00000070882.13	ENST00000313367.7	6749	23	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_11	12.6801074114907	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTTTTGTCTTTGTTT	13	True	NA	-5	True	AATAAA	-16	NA	24980178	24796539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24849068_24849177_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
transcript_16365.known	chr1	-	3545	9	FSM	ENSG00000162761.14	ENST00000342310.7	3545	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.05326872164704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTTTATTCAGGGGT	-4	True	NA	NA	False	ATTAAA	-16	NA	165356715	165201866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165204041_165205863_165206035_165208062_165208133_165210698_165210777_165213640_165213814_165249407_165249641_165353075_165353263_165355483_165355582_165356354
transcript_163651.known	chr7	-	5432	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	129.5	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	23	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_25123850_25123950_25124128_25125199
transcript_163653.nic	chr7	-	2458	10	NIC	ENSG00000153790.12	novel	3770	10	NA	NA	-40	-1040	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	3.09120616516523	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGTCTTTAATCTCTC	NA	False	NA	0	True	AATAAA	-19	NA	25180396	25135736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_25136794_25142240_25142333_25142639_25142815_25151595_25151685_25155010_25155193_25158500_25158531_25161188_25161261_25168288_25168466_25179174_25179333_25179970
transcript_163657.known	chr7	-	2438	14	FSM	ENSG00000122566.22	ENST00000676746.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4040.9218029741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	726	False	NA	-30	True	AATAAA	-9	NA	26201047	26189940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_163659.known	chr7	-	3522	13	FSM	ENSG00000122566.22	ENST00000678431.1	3522	13	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	3353.214871168	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTATGCACTGTATATT	292	False	NA	-32	True	AATAAA	-7	NA	26201481	26189942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26191421_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_163660.known	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	3794.24229004363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	1	True	NA	-7	True	AATAAA	-18	NA	26200746	26190124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_163661.known	chr7	-	2656	13	FSM	ENSG00000122566.22	ENST00000678935.1	2656	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3812.10833689472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	472	False	NA	-30	True	AATAAA	-9	NA	26201301	26189940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_163664.known	chr7	-	4044	13	FSM	ENSG00000122566.22	ENST00000679123.1	4044	13	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	3411.16939463418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	376	False	NA	NA	False	AAGAAA	-2	NA	26201397	26189665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_163669.known	chr7	-	3907	12	FSM	ENSG00000122566.22	ENST00000678277.1	3907	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	3502.43627132754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196654_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_16367.known	chr1	-	1342	8	FSM	ENSG00000162761.14	ENST00000367893.4	1342	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.0690449676497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGAGTTCTGTGACTAG	965	False	NA	NA	False	NA	NA	NA	165355746	165203873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165204041_165205863_165206035_165208062_165208133_165210698_165210777_165213640_165213814_165249407_165249641_165353075_165353263_165355483
transcript_163670.known	chr7	-	3850	12	FSM	ENSG00000122566.22	ENST00000679021.1	3850	12	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	3454.39740831096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	726	False	NA	NA	False	AAGAAA	-2	NA	26201047	26189665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_163677.known	chr7	-	2348	12	FSM	ENSG00000122566.22	ENST00000678779.1	2348	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3499.18703191149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	472	False	NA	-46	True	NA	NA	NA	26201301	26189956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26191055_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_16369.known	chr1	-	1966	10	FSM	ENSG00000143171.13	ENST00000359842.10	1966	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.4229164972073	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGAGCATGGGGTGTG	-16	True	NA	-1	True	AATAAA	-22	NA	165445126	165400921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165401411_165406811_165406918_165408226_165408319_165409557_165409691_165410701_165410832_165410948_165411110_165417040_165417221_165419869_165420015_165428718_165428967_165444844
transcript_163690.known	chr7	-	3664	12	FSM	ENSG00000122566.22	ENST00000354667.8	3664	12	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_11	2907.95409037618	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	1	True	NA	-16	True	AATAAA	-23	NA	26200746	26189926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_163691.known	chr7	-	4068	11	FSM	ENSG00000122566.22	ENST00000677906.1	4068	11	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2687.75033066689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_163693.known	chr7	-	3730	11	FSM	ENSG00000122566.22	ENST00000678962.1	3730	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2874.24230885289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	472	False	NA	-30	True	AATAAA	-9	NA	26201301	26189940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26191055_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_163695.known	chr7	-	4106	11	FSM	ENSG00000122566.22	ENST00000356674.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_10	2963.27738323634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGCACTGTATATTC	726	False	NA	-31	True	AATAAA	-8	NA	26201047	26189941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_163698.known	chr7	-	3816	12	FSM	ENSG00000122566.22	ENST00000678973.1	3816	12	0	0	0	0	multi-exon	FALSE	canonical	1	101	junction_5	3458.56453288054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193599_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_16370.known	chr1	+	680	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	778.838183878183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	4	True	NA	30	True	AATAAA	-32	NA	165631239	165655620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_163704.known	chr7	-	3628	11	FSM	ENSG00000122566.22	ENST00000618183.5	3628	11	0	0	0	0	multi-exon	FALSE	canonical	3	5879	junction_10	1275.85101402946	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	1	True	NA	-16	True	AATAAA	-23	NA	26200746	26189926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_16371.known	chr1	+	1158	6	FSM	ENSG00000143198.13	ENST00000367889.8	1158	6	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	163.952920071586	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCTGTTGCTTAAA	-2	True	NA	NA	False	AATAAA	-23	NA	165631233	165656136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631294_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_163710.known	chr7	-	4333	10	FSM	ENSG00000122566.22	ENST00000677839.1	4333	10	0	0	0	0	multi-exon	FALSE	canonical	3	5879	junction_9	1279.16578718754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATATTCAGCGTTTGA	472	False	NA	-22	True	AATAAA	-17	NA	26201301	26189932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_163740.known	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	1612.75027205082	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	-10	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_163743.known	chr7	+	2061	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	0	0	0	0	multi-exon	FALSE	canonical	3	3918	junction_4	208.415546445077	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTAACTGTCTTCT	6	True	NA	32	True	ATTAAA	-19	NA	26201744	26213607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_163745.known	chr7	+	1717	6	FSM	ENSG00000122565.19	ENST00000409747.5	1717	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	1638.31530542811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26	True	NA	32	True	AATAAA	-24	NA	26201764	26213356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208465_26208556_26211661_26211757_26212081
transcript_16375.known	chr1	-	2696	11	FSM	ENSG00000143149.13	ENST00000354775.5	2395	11	-301	0	-301	0	multi-exon	FALSE	canonical	3	388	junction_10	42.1354957251009	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATCGTGTTTTGAAAC	NA	False	NA	-7	True	AATAAA	-18	NA	165698863	165662215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165663145_165665017_165665131_165667308_165667451_165668925_165669014_165669261_165669451_165679441_165679583_165680486_165680684_165682106_165682242_165682980_165683111_165695251_165695398_165698377
transcript_163759.known	chr7	+	3740	4	FSM	ENSG00000050344.9	ENST00000056233.4	3740	4	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_2	31.3829394558395	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTAGTATGCTTCTAG	-32	True	NA	-32	True	AATAAA	-31	NA	26152197	26187137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26153069_26177942_26178123_26183700_26183785_26184532
transcript_163763.known	chr7	+	1068	4	FSM	ENSG00000122565.19	ENST00000456948.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	2050.59476466924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGAAAATTTAGATTGT	18	True	NA	4	True	AATAAA	-31	NA	26201756	26208412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26202610_26202970_26203023_26206367_26206511_26208392
transcript_163772.known	chr7	+	2258	1	FSM	ENSG00000050344.9	ENST00000606261.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAACCAAATTTACCTTA	NA	False	NA	34	True	AATAAA	-45	NA	26184059	26186317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26184100_26186300
transcript_163773.known	chr7	+	823	7	FSM	ENSG00000086300.16	ENST00000416246.5	823	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	62.1201792227507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGAAAGGTATTTCCT	8	True	NA	54	True	AAAAAG	-18	NA	26291920	26372022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26292087_26346419_26346467_26357006_26357128_26360974_26361062_26364534_26364636_26365046_26365146_26371820
transcript_163774.known	chr7	+	2665	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	13.3010024684858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	-12	True	NA	60	True	AATATA	-19	NA	26291861	26374383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_163776.known	chr7	+	2063	2	FSM	ENSG00000214870.10	ENST00000653790.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCCTGTAAATCCCTGC	12	True	NA	NA	False	NA	NA	NA	26398929	26401216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26399022_26399245
transcript_163777.known	chr7	-	3839	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_9	3.69966214673719	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	-3	True	NA	-6	True	AATAAA	-18	NA	26864590	26667067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
transcript_163779.known	chr7	+	2858	3	FSM	ENSG00000106038.13	ENST00000496902.7	2858	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGTTTTTGTGGCAG	-1	True	NA	23	True	AATAAA	-24	NA	27242801	27247830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_27243458_27245047_27245305_27245885
transcript_163783.known	chr7	-	1878	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	28.8231766154267	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	41	True	NA	-7	True	AATAAA	-16	NA	27662883	27525441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_163785.known	chr7	-	1669	7	FSM	ENSG00000106049.9	ENST00000428288.2	1669	7	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_6	117.114497631828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTGAATTCAAATAAATT	56	True	NA	-40	True	TATAAA	-13	NA	27662868	27525474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27662697
transcript_163794.known	chr7	+	2478	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	0	0	0	0	multi-exon	TRUE	canonical	3	1030	junction_8	131.749866579629	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	721	False	NA	71	True	AGTAAA	-15	NA	27740094	27828881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_163799.known	chr7	+	3423	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_14	297.887746265267	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGTTGTCAAATTTA	6	True	NA	27	True	ATTAAA	-31	NA	27740161	27829767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
transcript_1638.known	chr1	+	5675	3	FSM	ENSG00000287356.1	ENST00000661319.1	5675	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCGATTCCTGTCACT	5091	False	NA	NA	False	CATAAA	-34	NA	2315039	2323085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2315999_2316391_2317012_2318989
transcript_16381.known	chr1	-	1912	7	FSM	ENSG00000143183.18	ENST00000367881.11	1912	7	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_4	38.9358446678636	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAGAGTTGAATTATTA	7	True	NA	NA	False	AATAAA	-22	NA	165768868	165726794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
transcript_163817.known	chr7	-	3173	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	12.852528934027	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGGCTCTTTATTTT	-17	True	NA	NA	False	AATAAA	-19	NA	28180795	27830576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
transcript_16382.known	chr1	-	1100	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	210.471494506976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-1	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
transcript_163821.known	chr7	+	603	2	FSM	ENSG00000146592.17	ENST00000478078.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGCAAGATGCGAAGG	6	True	NA	NA	False	NA	NA	NA	28409366	28410441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_28409424_28409895
transcript_163822.known	chr7	-	4973	1	FSM	ENSG00000255690.3	ENST00000539664.3	4973	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGGAGTTTCCAAATA	-1	True	NA	NA	False	AATAAA	-18	NA	28958330	28953357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_28953400_28958300
transcript_163823.known	chr7	-	1739	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_12	120.402680848707	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTTGTTTTTGGGG	-23	True	NA	38	True	AATAAA	-18	NA	29146497	28995630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
transcript_163824.known	chr7	-	2087	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_12	45.5418000912959	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATGAGTCAATTCTT	-63	True	NA	NA	False	AATAAA	-17	NA	29146537	28995234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_163837.known	chr7	+	3167	13	FSM	ENSG00000106069.24	ENST00000222792.11	3167	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	4.60298815988049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAGTATGTGCAAGAA	-29	True	NA	5	True	ATTAAA	-16	NA	29194774	29514328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29194991_29354624_29354664_29367931_29367988_29393678_29393711_29398372_29398487_29400542_29400829_29480278_29480357_29495951_29496037_29499866_29500041_29504743_29504822_29507227_29507366_29509300_29509407_29512563
transcript_163840.known	chr7	+	570	2	FSM	ENSG00000106069.24	ENST00000470261.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATCTTCTGCACTGTCC	0	True	NA	NA	False	NA	NA	NA	29146631	29147304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29146746_29146848
transcript_163844.known	chr7	+	1652	2	FSM	ENSG00000176532.4	ENST00000319694.3	1652	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAGGTGACTTTTGTA	-3	True	NA	6	True	ATTAAA	-16	NA	29563834	29567293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29564378_29566184
transcript_163845.known	chr7	+	503	2	FSM	ENSG00000176532.4	ENST00000450427.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGCAGAAAGAAAAGCAA	1469	False	NA	NA	False	NA	NA	NA	29565449	29566383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29565754_29566184
transcript_163847.known	chr7	+	995	2	FSM	ENSG00000227855.4	ENST00000602965.1	995	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTTCTTTGTCAAAG	NA	False	NA	NA	False	AATAAA	-22	NA	29684641	29687892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29685023_29687278
transcript_163850.known	chr7	+	4184	9	FSM	ENSG00000122574.12	ENST00000242140.10	4225	9	46	-5	46	5	multi-exon	FALSE	canonical	0	0	junction_4	9.84171605971235	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCGTTTCCTTGTTAAA	29	True	NA	34	True	AATAAA	-22	NA	29806553	29917066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285_29904363_29914492
transcript_163854.known	chr7	+	7514	14	FSM	ENSG00000106086.20	ENST00000440706.3	7514	14	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_13	32.5823490168469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTGTGGTTTTCTG	28	False	NA	29	True	AATAAA	-29	NA	30028684	30084663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30078589
transcript_163856.known	chr7	+	2140	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	54.3438537267079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	-42	True	NA	19	True	AATAAA	-16	NA	30028360	30118345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
transcript_163858.nnic	chr7	+	2086	13	NIC	ENSG00000106086.20	novel	2140	14	NA	NA	-23	-15	combination_of_known_splicesites	FALSE	canonical	3	20	junction_12	58.8894916111714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAATTGCTTGCCTATTT	NA	False	NA	4	True	AATAAA	-1	NA	30028337	30118330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30117969
transcript_163859.known	chr7	+	2840	13	FSM	ENSG00000106086.20	ENST00000396259.5	2840	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	59.6831332026804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTATTTCTGTTTCT	38	True	NA	NA	False	AATAAA	-17	NA	30028440	30130483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30129265
transcript_163863.known	chr7	+	2293	13	FSM	ENSG00000106086.20	ENST00000258679.11	2293	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	63.931115272612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTATTGTTTCAGTTCAC	-41	True	NA	NA	False	AATAAA	-19	NA	30028361	30090744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30090152
transcript_163864.known	chr7	-	5254	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	25.4878922836162	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGGAGTGGCCTCT	3	True	NA	-6	True	AATAAA	-16	NA	29989801	29920108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
transcript_163869.known	chr7	-	703	5	FSM	ENSG00000106080.11	ENST00000412494.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	49.7845357515765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTTTTATACAATGT	247	False	NA	-15	True	AATATA	-41	NA	30026419	30014670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30014894_30018995_30019124_30020212_30020305_30022664_30022817_30026311
transcript_163871.known	chr7	-	4978	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	8.49836585598798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGTGAAAAATTCT	-36	True	NA	-3	True	AATAAA	-18	NA	30026702	30010586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
transcript_163879.nic	chr7	-	1986	2	ISM	ENSG00000136193.17	ENST00000409570.3	535	4	-220	20193	122	-20171	5prime_fragment	FALSE	canonical	3	510	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACATGAATTTCTATTT	-6	True	NA	NA	False	TTTAAA	-16	NA	29989950	29967391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_29969069_29989641
transcript_163880.known	chr7	-	751	2	FSM	ENSG00000106080.11	ENST00000479939.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACATAAAATTTTTCA	30	True	NA	NA	False	NA	NA	NA	30026636	30022390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30022817_30026311
transcript_163881.known	chr7	+	1234	1	FSM	ENSG00000235859.5	ENST00000496846.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCACATCCTTTGTGTG	5	True	NA	NA	False	AAGAAA	-11	NA	30371507	30372741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30371500_30372700
transcript_163883.nic	chr7	-	4546	15	NIC	ENSG00000106100.11	novel	4503	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	4.78731316574744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTACGGGTTGAGTCTG	-15	True	NA	-7	True	AATAAA	-12	NA	30478744	30424533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_30425711_30429373_30429458_30433095_30433180_30435997_30436082_30437572_30437657_30446140_30446225_30446966_30447051_30448297_30448382_30451215_30453041_30455136_30455312_30456720_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
transcript_163884.known	chr7	-	4503	14	FSM	ENSG00000106100.11	ENST00000222823.9	4503	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	4.81245917526679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGAGTCTGGAGTTTT	-1	True	NA	0	True	AATAAA	-19	NA	30478784	30424526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30425711_30429373_30429458_30433095_30433180_30435997_30436082_30437572_30437657_30446140_30446225_30446966_30447051_30448297_30448382_30451215_30453041_30455136_30455312_30456720_30457043_30459151_30459241_30459900_30460042_30478605
transcript_163889.known	chr7	-	757	5	FSM	ENSG00000106100.11	ENST00000419799.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.69258240356725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCACCCAGCCTGACA	-13	True	NA	NA	False	NA	NA	NA	30478742	30456742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
transcript_16389.nic	chr1	-	1377	7	NIC	ENSG00000143183.18	novel	1100	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	234.043739976574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-1	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768481
transcript_163891.known	chr7	+	2385	18	FSM	ENSG00000106105.15	ENST00000676210.1	2385	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	540.817240107258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	-47	True	NA	NA	False	AAAAAG	-32	NA	30594842	30633874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30606325_30606398_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_163894.known	chr7	+	2552	18	FSM	ENSG00000106105.15	ENST00000444666.6	2552	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	544.41768516182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	7	True	NA	19	True	ATTAAA	-22	NA	30594896	30634033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30627056_30627191_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_163897.known	chr7	+	2536	18	FSM	ENSG00000106105.15	ENST00000675529.1	2536	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	533.846212449534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	-58	True	NA	-38	True	AAGAAA	-37	NA	30594831	30633976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_163906.known	chr7	+	2437	17	FSM	ENSG00000106105.15	ENST00000389266.8	2437	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	353.476876674769	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	-12	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_163917.known	chr7	+	2378	16	FSM	ENSG00000106105.15	ENST00000676403.1	2378	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	486.309841790419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	-47	True	NA	19	True	ATTAAA	-22	NA	30594842	30634033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30632246_30632438_30633734
transcript_163919.known	chr7	+	2246	16	FSM	ENSG00000106105.15	ENST00000674807.1	2246	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	490.333963289874	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACTTGCGCTAATAAAAAA	-58	True	NA	NA	False	AAAAAG	-40	NA	30594831	30633882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_16392.nic	chr1	-	345	3	ISM	ENSG00000143183.18	ENST00000628579.1	477	4	31	4635	-3	-4635	5prime_fragment	FALSE	canonical	3	683	junction_1	23	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAAGATGAGATATTAG	-16	True	NA	NA	False	AAAAAG	-5	NA	165768891	165759527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_165759585_165768191_165768270_165768681
transcript_163927.known	chr7	+	1252	7	FSM	ENSG00000106105.15	ENST00000454308.6	1252	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	528.79884854472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCACTGTTAGATT	-26	True	NA	NA	False	AATAAA	-29	NA	30594863	30605448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30604989
transcript_163929.known	chr7	-	784	4	FSM	ENSG00000006625.18	ENST00000447901.1	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	142.549016910753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTATCTTACTTGGGTG	15	True	NA	NA	False	NA	NA	NA	30504801	30496976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30497740_30497897_30498802_30498939_30504568
transcript_16393.known	chr1	+	4838	8	FSM	ENSG00000143179.16	ENST00000642653.1	4838	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	213.486318445153	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGGCTCTCGCCTTC	-5	True	NA	6	True	AATAAA	-6	NA	165827804	165911608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165827933_165885141_165885380_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_163930.known	chr7	-	1158	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_3	126.388290596875	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-13	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
transcript_163931.known	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_2	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-17	True	NA	NA	False	AATAAA	-39	NA	30594774	30577499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
transcript_163934.known	chr7	-	1012	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	312.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-13	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30498802_30498939_30504568
transcript_163938.known	chr7	+	2276	17	FSM	ENSG00000106105.15	ENST00000676140.1	2276	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	474.185288152216	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	-12	True	NA	NA	False	AAAAAG	-32	NA	30594877	30633874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615897_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_163939.known	chr7	+	2367	17	FSM	ENSG00000106105.15	ENST00000676259.1	2367	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	470.370727292579	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	-12	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601128_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_163940.known	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	15	True	NA	-17	True	AATAAA	-5	NA	30504801	30496632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30504568
transcript_163941.known	chr7	-	1032	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	333.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGTCTCTACTAAA	2620	False	30504859	-7	True	AATAAA	-15	NA	30504841	30496622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30500535_30500682_30504568
transcript_163942.known	chr7	-	954	4	FSM	ENSG00000006625.18	ENST00000409436.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	322.759972735158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAAAGTTGATATTC	0	True	NA	NA	False	ATTAAA	-16	NA	30504816	30497472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497897_30498802_30498939_30500535_30500682_30504568
transcript_163943.known	chr7	+	2231	16	FSM	ENSG00000106105.15	ENST00000675810.1	2231	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	486.143170498385	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTGCGCTAATAAAAAAAA	-57	True	NA	NA	False	AAAAAG	-42	NA	30594832	30633884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_163944.known	chr7	-	2930	12	FSM	ENSG00000106113.19	ENST00000471646.6	2930	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1.31110955471418	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATTCTGATCACC	-2	True	NA	NA	False	AATAAA	-25	NA	30682456	30651941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30653601_30655038_30655081_30655579_30655716_30655926_30656013_30660572_30660646_30662155_30662217_30662693_30662848_30665069_30665188_30665529_30665640_30667227_30667314_30681914_30682041_30682177
transcript_163945.known	chr7	+	2733	18	FSM	ENSG00000106125.14	ENST00000265299.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_16	9.34276175613153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGGGCCCAGGCTCAT	1	True	NA	13	True	TATAAA	-16	NA	30771416	30892387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215_30852280_30853393_30853460_30859256_30859325_30872242_30872307_30875494_30875657_30882180_30882362_30882920_30882994_30891956
transcript_163950.nic	chr7	+	4595	14	ISM	ENSG00000106125.14	ENST00000265299.6	2733	18	-23	17395	-23	-17394	5prime_fragment	FALSE	canonical	3	9	junction_11	9.05669192581117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGTTTAAGACTCACCCA	-22	True	NA	24	True	AATAAA	-21	NA	30771393	30874992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215_30852280_30853393_30853460_30859256_30859325_30872242
transcript_163959.known	chr7	+	1889	14	FSM	ENSG00000078549.15	ENST00000409363.5	1889	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	4.9278822701683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGGTCAGCCTCAGTG	17	False	NA	NA	False	NA	NA	NA	31052526	31107006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31052679_31063193_31063316_31064830_31064937_31077990_31078099_31084140_31084251_31084736_31084835_31085309_31085443_31086383_31086538_31086942_31087004_31087626_31087697_31092643_31092736_31103236_31103367_31104867_31104910_31106495
transcript_163960.known	chr7	+	1768	5	FSM	ENSG00000106341.11	ENST00000342032.8	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.56637297521078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	-6	True	NA	9	True	AATAAA	-15	NA	31687214	31708455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31687307_31692405_31692524_31695468_31695622_31696964_31697118_31707203
transcript_163962.known	chr7	+	569	4	FSM	ENSG00000106341.11	ENST00000409146.3	569	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	18.3847763108502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAGATGTATGCCAT	-6	True	NA	NA	False	NA	NA	NA	31687214	31707409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31687307_31692405_31692524_31696964_31697118_31707203
transcript_163963.nnic	chr7	-	1551	3	Genic_Genomic	ENSG00000226468.2	novel	796	1	NA	NA	-7328	66	multi-exon	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAGATTTATTGAACTT	NA	False	NA	NA	False	AATAAA	-31	NA	32465086	32456896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr7_-_32457980_32464524_32464789_32464882
transcript_163964.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1031.8644533077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4904	False	NA	-6	True	AATAAA	-16	NA	32490361	32487034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
transcript_163965.known	chr7	-	2214	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_4	40.0530897684561	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGTTTTCTGCGTTTG	11	True	NA	-5	True	NA	NA	NA	32490380	32485337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
transcript_163967.known	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	1021.4765048693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4402	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
transcript_163970.known	chr7	-	740	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	1010.22299518473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTTTCTTCTGATT	-18	True	NA	-5	True	ATTAAA	-18	NA	32495283	32486804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
transcript_163971.known	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1105.63194599288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	11	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
transcript_163976.known	chr7	+	6987	16	FSM	ENSG00000105778.20	ENST00000318709.9	6987	16	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_11	8.1948493308636	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCCTAGAAGTACCCTG	-37	True	NA	24	True	AATAAA	-36	NA	32495488	32588726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_163979.nnic	chr7	+	2110	16	NNC	ENSG00000105778.20	novel	6987	16	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	27.8620410834047	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAATTTTGAGTTCTGA	-13	True	NA	9	True	ATTAAA	-18	NA	32495512	32584167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32559222_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_16398.known	chr1	+	4801	7	FSM	ENSG00000143179.16	ENST00000367879.9	4801	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	39.2743201369829	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCCTTCTGTGTGATGC	15	True	NA	16	True	AATAAA	-16	NA	165827613	165911618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165827933_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_163982.known	chr7	+	4336	15	FSM	ENSG00000105778.20	ENST00000409301.5	4336	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	29.4590688022191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTTAATATCACTTG	0	True	NA	12	True	AATAAA	-21	NA	32495525	32586166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580801_32580891_32583791
transcript_163989.nnic	chr7	+	2694	3	NNC	ENSG00000237004.4	novel	711	2	NA	NA	-574	1060	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	2.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCATAGTCTTTTAGGCT	NA	False	NA	NA	False	AATAAA	-26	NA	32727994	32754804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_32729010_32751393_32751474_32753205
transcript_163992.known	chr7	+	711	2	FSM	ENSG00000237004.4	ENST00000650302.1	711	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATCGTCTGGGATGTGA	-6	True	NA	NA	False	NA	NA	NA	32728837	32753744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32729010_32753205
transcript_163993.known	chr7	-	3608	4	FSM	ENSG00000170852.12	ENST00000304056.9	3608	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	11.5854314646552	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTTTCTTTTGTTA	-5	True	NA	-24	True	AATAAA	-15	NA	32891760	32868171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32870881_32874991_32875158_32879434_32879943_32891535
transcript_164000.known	chr7	+	3424	10	FSM	ENSG00000122642.11	ENST00000242209.9	3424	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_5	25.9890765277536	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGGTTTTCTGATATT	6	True	NA	4	True	AATAAA	-44	NA	32957439	33006928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32957795_32974616_32974763_32975181_32975372_32976353_32976500_32980363_32980554_32988506_32988653_32996162_32996350_33000114_33000261_33002675_33002840_33005174
transcript_164001.known	chr7	+	1549	6	FSM	ENSG00000122642.11	ENST00000494374.5	1549	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_5	33.184333653096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTAAATCCTACACCAAA	4	True	NA	NA	False	NA	NA	NA	32957437	32989026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32957795_32974616_32974763_32975181_32975372_32976353_32976500_32980363_32980554_32988506
transcript_164002.known	chr7	+	3621	11	FSM	ENSG00000122642.11	ENST00000538336.5	3621	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	62.4579858785088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTTTTCTGATATTTT	-30	True	NA	6	True	TATAAA	-16	NA	32957403	33006930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32957795_32963543_32963703_32974616_32974763_32975181_32975372_32976353_32976500_32980363_32980554_32988506_32988653_32996162_32996350_33000114_33000261_33002675_33002840_33005174
transcript_164003.known	chr7	-	1742	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_9	103.163420639414	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-3	True	NA	-16	True	AATAAA	-24	NA	33062796	33014129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_164005.known	chr7	-	1667	9	FSM	ENSG00000122643.23	ENST00000610140.7	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_8	37.6777039507452	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	29	False	33062793	-16	True	AATAAA	-24	NA	33062776	33014129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33062567
transcript_164016.known	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	22.3284571791246	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-4	True	NA	-2	True	AATAAA	-23	NA	33109404	33094796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
transcript_164019.known	chr7	-	2088	5	FSM	ENSG00000164610.10	ENST00000492391.2	2088	5	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_4	23.8484800354236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAATCTCTGAGGCGT	-2	True	NA	NA	False	NA	NA	NA	33109402	33094935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33100562_33109220
transcript_164021.known	chr7	+	3996	23	FSM	ENSG00000122507.21	ENST00000242067.11	3996	23	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	25.8982832322949	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCCTCTCAGTACAA	12	True	NA	NA	False	AATAAA	-20	NA	33129563	33606069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_164024.known	chr7	+	3243	22	FSM	ENSG00000122507.21	ENST00000671890.1	3243	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	32.4039134278898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGGGAAGTCAGCTGA	202	False	NA	NA	False	NA	NA	NA	33129529	33605405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_164026.known	chr7	+	3899	21	FSM	ENSG00000122507.21	ENST00000350941.7	3899	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	31.2569992161756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGCCTCTCAGTACA	-12	True	NA	NA	False	AATAAA	-19	NA	33129539	33606068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_164027.known	chr7	+	3169	20	FSM	ENSG00000122507.21	ENST00000671963.1	3169	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	33.5418042385759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATATAGTAAATGTATC	12	True	NA	NA	False	NA	NA	NA	33129563	33605581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_164036.nnic	chr7	+	419	3	NNC	ENSG00000122507.21	novel	2832	23	NA	NA	198074	94	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGGCTATACCTTT	NA	False	NA	16	True	AATAAA	-17	NA	33736256	33877274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_33736342_33860594_33860706_33877051
transcript_164039.known	chr7	+	5287	15	FSM	ENSG00000164619.10	ENST00000649409.2	5287	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_12	9.21843760280096	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTGTGGATTTGTT	4	True	NA	NA	False	AATAAA	-33	NA	33905538	34156427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33905747_33906817_33906904_33937288_33937389_33966478_33966562_33970328_33970420_33974701_33974785_34046305_34046406_34051860_34051971_34055162_34055304_34058058_34058164_34062001_34062048_34078856_34079187_34085755_34086093_34143229_34143361_34153091
transcript_164044.known	chr7	+	602	3	FSM	ENSG00000164619.10	ENST00000496609.1	602	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTGGGGCTGGAAGGA	3	True	NA	NA	False	NA	NA	NA	33905502	33937560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33905747_33906817_33906904_33937288
transcript_164046.known	chr7	-	2884	9	FSM	ENSG00000122557.11	ENST00000311350.8	2884	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	28.552309451251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	8	True	NA	-4	True	AATAAA	-18	NA	35695135	35632658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183_35694628_35694800
transcript_164049.known	chr7	-	3057	8	FSM	ENSG00000122557.11	ENST00000396081.5	3057	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	11.8425038720358	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	8	True	NA	-4	True	AATAAA	-18	NA	35695135	35632658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
transcript_16406.known	chr1	+	473	3	FSM	ENSG00000229588.3	ENST00000653824.2	2342	3	59	1810	59	-1810	multi-exon	FALSE	canonical	0	0	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTCTCTGGTTCTTCT	34	False	NA	NA	False	ATTAAA	-17	NA	166165910	166339090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_166166055_166335327_166335466_166338899
transcript_164064.nic	chr7	+	2541	13	NIC	ENSG00000122545.21	novel	4399	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	434.187267585466	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTGTGAGGTCTTAA	NA	False	NA	15	True	AATAAA	-15	NA	35801022	35905305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898214_35898384_35903075_35903216_35904253
transcript_164065.known	chr7	+	4399	13	FSM	ENSG00000122545.21	ENST00000399034.7	4399	13	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_1	291.95874661024	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGCTCCAATGAATTAT	NA	False	NA	2	True	AATAAA	-15	NA	35800931	35907105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_164067.known	chr7	+	1584	12	FSM	ENSG00000122545.21	ENST00000435235.6	1584	12	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	377.109778610907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGTACCTTTCCTACA	NA	False	NA	NA	False	NA	NA	NA	35801038	35904500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35801271_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_164079.known	chr7	+	583	6	FSM	ENSG00000122545.21	ENST00000634600.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_1	552.38950026227	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGGAATGCCAACAGTT	-8	True	NA	NA	False	AAAAAG	-42	NA	35801215	35879910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35801271_35832803_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822
transcript_164084.known	chr7	+	4655	8	FSM	ENSG00000122547.11	ENST00000242108.9	4655	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	4.94046184736874	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGGGTTTTGACAAAT	-7	True	NA	25	True	ATTAAA	-22	NA	36153253	36301538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_36153675_36154132_36155203_36238984_36239037_36281114_36281226_36284685_36284821_36287638_36287778_36296992_36297188_36299006
transcript_16409.nnic	chr1	+	3805	7	NNC	ENSG00000143157.12	novel	5751	6	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	86.7001537868686	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTATGGTGATTTTATT	-18	True	NA	13	True	AATAAA	-19	NA	166839478	166854471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166849735_166849788_166850424_166852584
transcript_164090.nic	chr7	+	4872	25	NIC	ENSG00000011426.11	novel	4731	24	NA	NA	-46	0	combination_of_known_junctions	TRUE	canonical	3	65	junction_21	107.595306589089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	NA	False	NA	34	True	AATAAA	-23	NA	36389774	36453791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36428306_36428361_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_164091.known	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_9	44.6629469244621	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-3	True	NA	34	True	AATAAA	-23	NA	36389861	36453791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_164097.known	chr7	+	4661	23	FSM	ENSG00000011426.11	ENST00000396068.6	4661	23	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_8	76.0655980493914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-12	True	NA	34	True	AATAAA	-23	NA	36389820	36453791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_164106.known	chr7	-	5092	22	FSM	ENSG00000155849.16	ENST00000310758.9	5092	22	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_21	22.4306439240623	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGATGTTTAAATTCC	15	True	NA	NA	False	AATAAA	-20	NA	37448864	36852905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_164107.known	chr7	-	2621	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_21	30.4054237911325	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGGGCCCAGACATG	206	False	37449242	NA	False	NA	NA	NA	37449223	36855550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_164114.nic	chr7	-	1664	14	ISM	ENSG00000155849.16	ENST00000310758.9	5092	22	-86	280100	0	0	5prime_fragment	FALSE	canonical	3	145	junction_13	19.2734910076328	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	0	True	NA	NA	False	AGTAAA	-3	NA	37448950	37133005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_164115.nic	chr7	-	1746	14	ISM	ENSG00000155849.16	ENST00000448602.5	2621	22	6	277455	6	0	5prime_fragment	FALSE	canonical	3	92	junction_13	32.511809415646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	-16	True	NA	NA	False	AGTAAA	-3	NA	37449217	37133005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_16412.nnic	chr1	+	3052	6	NNC	ENSG00000143157.12	novel	5751	6	NA	NA	-53	2264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	94.835858197203	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCGTATCTAGGACTCT	NA	False	NA	NA	False	AATAAA	-2	NA	166839393	166851472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166849735_166849788
transcript_164123.known	chr7	-	2876	5	FSM	ENSG00000155849.16	ENST00000463390.1	2876	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	29.5550334122633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23	True	NA	NA	False	NA	NA	NA	37448856	37269453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_164124.known	chr7	+	2515	3	FSM	ENSG00000086289.12	ENST00000199448.9	2515	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	3.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGTTATCCTCTCT	-6	True	NA	9	True	AATAAA	-24	NA	37920639	37951936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_37921209_37948839_37949049_37950199
transcript_164125.known	chr7	+	638	2	FSM	ENSG00000086289.12	ENST00000423717.1	638	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGTTTTTTGACATCCAG	12	True	NA	NA	False	CATAAA	-21	NA	37920657	37950286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_37921209_37950199
transcript_16413.known	chr1	+	5751	6	FSM	ENSG00000143157.12	ENST00000367876.9	5751	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	39.2907113705008	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCATACCTTAGTTG	-22	True	NA	NA	False	AAAAAG	-21	NA	166839474	166856359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
transcript_164130.known	chr7	+	1365	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	141.303455961511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGTAATAAAATCTG	-9	True	NA	-4	True	NA	NA	NA	38178350	38230381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_164132.known	chr7	+	1703	9	FSM	ENSG00000010270.14	ENST00000009041.12	1703	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	30.2611033341483	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCTGTTTTTTCA	-4	True	NA	13	True	ATTAAA	-14	NA	38178244	38230669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_164138.known	chr7	+	1341	8	FSM	ENSG00000010270.14	ENST00000434197.5	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	120.993168975672	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	14	True	NA	-6	True	NA	NA	NA	38178262	38230379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_164147.known	chr7	-	3145	20	FSM	ENSG00000078053.17	ENST00000325590.9	3145	20	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	5.67884737241849	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGATGAGTCTTTT	-22	True	NA	-11	True	AATAAA	-30	NA	38631420	38383703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_38384926_38389803_38389906_38391747_38392018_38394004_38394215_38422420_38422478_38426953_38426987_38429841_38429866_38432188_38432213_38436271_38436389_38461282_38461412_38462974_38463114_38465466_38465550_38466172_38466249_38475330_38475417_38476861_38476970_38491049_38491146_38494432_38494528_38503649_38503705_38534930_38535012_38631282
transcript_164151.known	chr7	-	5854	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_12	21.8817555166352	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	1	True	NA	50	True	AATAAA	-13	NA	38909191	38722973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_164157.known	chr7	-	3181	28	FSM	ENSG00000006715.16	ENST00000395969.6	3181	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	41.8745923142122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGACTCACTTTTACT	18	False	NA	-5	True	AATAAA	-18	NA	38909174	38725554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_164159.nic	chr7	-	1163	13	ISM	ENSG00000006715.16	ENST00000310301.9	5854	29	-18	49548	-18	77	5prime_fragment	FALSE	canonical	3	165	junction_12	23.0066415531593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCTTGATTTTACTTCT	NA	False	NA	NA	False	AAGAAA	-7	NA	38909209	38772521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_16416.nic	chr1	+	3015	5	ISM	ENSG00000143157.12	ENST00000367876.9	5751	6	10	4887	10	2264	5prime_fragment	FALSE	canonical	3	164	junction_1	35.6957630538976	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCGTATCTAGGACTCT	-12	True	NA	NA	False	AATAAA	-2	NA	166839484	166851472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937
transcript_164162.known	chr7	+	871	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	30	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	9	True	NA	12	True	ATTAAA	-17	NA	39566403	39572881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39566548_39570505_39570628_39572276
transcript_164163.known	chr7	+	660	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAATTTACTTTAGTCC	-10	True	NA	NA	False	GATAAA	-4	NA	39566384	39571002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39566548_39570505
transcript_164170.known	chr7	+	2787	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_3	56.3443652905949	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	-15	True	NA	17	True	AATAAA	-16	NA	39623571	39708120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
transcript_164178.known	chr7	+	705	3	FSM	ENSG00000006451.8	ENST00000468201.1	705	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	487.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAATTTACTTTAAAA	-22	True	NA	105	True	ACTAAA	-24	NA	39623564	39706391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39623826_39696684_39696860_39706122
transcript_164186.known	chr7	-	2234	1	FSM	ENSG00000259826.1	ENST00000569710.1	2234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACGACTATATTTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	39949755	39947521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_39947500_39949800
transcript_164187.known	chr7	+	9525	14	FSM	ENSG00000065883.17	ENST00000181839.10	9525	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	33.1108948980052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATTTTTCAGCCTTGTT	22	True	NA	NA	False	AATAAA	-18	NA	39950255	40099580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39951853_39987598_39988259_39997493_39997665_39999360_39999501_40001860_40002032_40045835_40046026_40047820_40047878_40062825_40062928_40063022_40063101_40078004_40078122_40078719_40078852_40088125_40088332_40092784_40093238_40094129
transcript_164190.nic	chr7	+	2901	3	ISM	ENSG00000065883.17	ENST00000613626.4	3099	10	-711	71816	-472	-453	5prime_fragment	FALSE	canonical	3	137	junction_2	18	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAGAAAAGAAACTCCG	-11	True	NA	NA	False	AGTAAA	-14	NA	39949648	39997530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_39951853_39987598_39988259_39997493
transcript_164196.known	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	0	539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	5	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_40133260_40134228
transcript_164197.known	chr7	+	1563	15	FSM	ENSG00000175600.16	ENST00000628514.3	1563	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	14.2599768153917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	10	True	NA	NA	False	NA	NA	NA	40135004	40860631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40684055_40684134_40749433_40749498_40860315
transcript_164198.known	chr7	+	1617	14	FSM	ENSG00000175600.16	ENST00000335693.9	1617	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	8.60232526704263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	10	True	NA	11	True	AATAAA	-25	NA	40135004	40860763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_1642.nic	chr1	+	2347	2	NIC	ENSG00000287356.1	novel	5675	3	NA	NA	-105	-2064	intron_retention	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCTGACACAAATGTGG	4986	False	NA	38	True	NA	NA	NA	2314934	2319259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_2317012_2318989
transcript_164202.known	chr7	+	1341	13	FSM	ENSG00000175600.16	ENST00000401647.7	1341	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	8.82546819658248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	10	True	NA	NA	False	NA	NA	NA	40135004	40860631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_164203.known	chr7	-	1632	2	FSM	ENSG00000122641.11	ENST00000442711.1	1632	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	0	True	NA	NA	False	ATTAAA	-10	NA	41700609	41689533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_41690543_41699986
transcript_164204.known	chr7	-	8223	15	FSM	ENSG00000106571.15	ENST00000677605.1	8223	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	27.391343783862	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGGTTGTTTATT	NA	False	NA	-4	True	AATAAA	-19	NA	42237555	41960948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42237498
transcript_164206.known	chr7	-	1453	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	4662.6187317322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATACTTAAGTGTCAAA	23	False	NA	-26	True	AATAAA	-3	NA	42932154	42916881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
transcript_164207.known	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	9757	junction_7	587.92537357896	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	3	True	NA	-5	True	AATAAA	-24	NA	42932174	42916860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_164209.known	chr7	-	1289	7	FSM	ENSG00000106588.12	ENST00000457444.6	1289	7	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_5	3949.47226080762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGGCTTAAGGCTC	11	True	NA	-9	True	AATAAA	-20	NA	42932166	42916864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42927382_42927460_42932117
transcript_164210.known	chr7	-	683	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	4257.74384386849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCAGCCTTTTAGGAG	-8	True	NA	-40	True	AATAAA	-12	NA	42932185	42917412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
transcript_164212.known	chr7	-	1823	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTTCATTGTAT	-39	True	NA	-3	True	ATTAAA	-17	NA	42912090	42909274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42910922_42911914
transcript_164213.known	chr7	-	1743	2	FSM	ENSG00000136197.14	ENST00000438029.1	1743	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTGTGGAAGTAAGT	141	False	NA	NA	False	ACTAAA	-13	NA	42911910	42909621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42910922_42911467
transcript_164214.known	chr7	-	578	2	FSM	ENSG00000136197.14	ENST00000432637.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTTCATGTCTT	107	False	NA	NA	False	NA	NA	NA	42911944	42910645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42911194_42911914
transcript_164216.nic	chr7	+	990	4	NIC	ENSG00000106591.4	novel	859	3	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	541.66676923076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	NA	False	NA	14	True	AATAAA	-24	NA	42932322	42937857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_42932517_42934954_42935137_42937163_42937242_42937321
transcript_164217.known	chr7	+	859	3	FSM	ENSG00000106591.4	ENST00000223324.3	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_2	61	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	8	True	NA	14	True	AATAAA	-24	NA	42932375	42937857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_42932517_42934954_42935137_42937321
transcript_164218.known	chr7	+	2734	3	FSM	ENSG00000106591.4	ENST00000432845.1	2734	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGATTCTTTATGTT	8	True	NA	11	True	AGTAAA	-17	NA	42932375	42937627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_42932517_42934954_42937242_42937321
transcript_16422.known	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	56.9496734505339	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-13	True	NA	-3	True	AATAAA	-16	NA	166876264	166856509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
transcript_164222.nic	chr7	+	5434	28	NIC	ENSG00000002746.15	novel	9453	30	NA	NA	-78	127	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	4.01471914605163	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTGTATATCTCCACA	1512	False	NA	7	True	ATTAAA	-16	NA	43112550	43562179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_43112938_43311762_43312088_43320634_43320743_43360885_43360981_43396813_43396890_43407561_43407732_43438002_43438146_43442528_43442630_43444217_43445571_43450827_43450930_43456296_43456448_43463659_43463800_43466446_43466569_43468919_43469106_43479609_43479745_43492074_43492181_43493083_43493181_43500698_43500783_43501212_43501323_43507136_43507258_43508017_43508132_43508968_43509122_43541162_43541262_43541868_43541999_43550444_43550592_43552221_43552337_43554591_43554791_43561814
transcript_164226.nic	chr7	+	1966	6	NIC	ENSG00000002746.15	novel	5169	28	NA	NA	-78	805	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	6.01331855134916	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGAGCCTGGCGGTGT	1512	False	NA	NA	False	NA	NA	NA	43112550	43408536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_43112938_43311762_43312088_43320634_43320743_43360885_43360981_43396813_43396890_43407561
transcript_164240.known	chr7	-	1520	7	FSM	ENSG00000106603.20	ENST00000446330.6	1520	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	361.445900362542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCCCCAGCTTTTAAT	-7	True	NA	NA	False	NA	NA	NA	43729513	43608818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43609642_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_164243.known	chr7	-	1085	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	462.800532987305	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	17	True	NA	-10	True	AATAAA	-17	NA	43729489	43639256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
transcript_164244.nic	chr7	-	1010	7	ISM	ENSG00000106603.20	ENST00000446564.5	1177	8	-50	30024	-10	0	5prime_fragment	FALSE	canonical	3	47	junction_6	446.685105340813	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-27	True	NA	-10	True	AATAAA	-17	NA	43729533	43639256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650611_43650713_43729428
transcript_164245.nic	chr7	-	1140	7	ISM	ENSG00000106603.20	ENST00000438444.5	3223	8	18	8105	18	0	5prime_fragment	FALSE	canonical	3	88	junction_5	432.080014452056	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	43729699	43639256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43665657_43665723_43729428
transcript_164247.known	chr7	-	899	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	96.5248154621391	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-17	True	NA	-10	True	AATAAA	-17	NA	43729523	43639256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_164251.known	chr7	+	3918	7	FSM	ENSG00000164543.7	ENST00000319357.6	3918	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	11.8145390656315	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAGAATGTGAGACAGA	-2	True	NA	NA	False	ATTAAA	-16	NA	43583107	43627379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43583450_43595900_43596114_43608255_43608401_43619596_43619724_43623571_43623621_43623708_43623889_43624517
transcript_164255.nic	chr7	+	474	2	ISM	ENSG00000164543.7	ENST00000319357.6	3918	7	-47	31394	-13	-23738	5prime_fragment	FALSE	canonical	3	111	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGATTGTCGGATGGA	NA	False	NA	NA	False	AAAAAG	-8	NA	43583060	43595985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_43583450_43595900
transcript_164257.known	chr7	+	1161	9	FSM	ENSG00000106605.11	ENST00000402924.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	245.091692025658	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	-8	True	NA	18	True	ATTAAA	-20	NA	43758686	43807342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43758735_43760016_43760111_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_164259.known	chr7	+	1074	8	FSM	ENSG00000106605.11	ENST00000265523.9	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	55.1606189010876	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	-15	True	NA	18	True	ATTAAA	-20	NA	43758679	43807342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43758735_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_16426.known	chr1	+	4170	6	FSM	ENSG00000198842.10	ENST00000361200.7	4170	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.632455532033676	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAGAAGAAAACCACTT	5	True	NA	NA	False	NA	NA	NA	167094074	167129165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167094195_167094833_167094960_167113709_167113805_167117327_167117560_167119248_167119467_167125786
transcript_164262.known	chr7	-	3571	6	FSM	ENSG00000106608.17	ENST00000453200.6	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	18.095303258028	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	12	True	NA	-26	True	AATAAA	-16	NA	43906596	43875912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43906561
transcript_164263.known	chr7	-	3563	5	FSM	ENSG00000106608.17	ENST00000402306.7	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	30.6349473640808	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-7	True	NA	-26	True	AATAAA	-16	NA	43906615	43875912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43906561
transcript_164265.known	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_3	180.392781328842	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-9	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
transcript_164267.known	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_2	23.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-9	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43866983_43868962_43869075_43869307
transcript_164278.nnic	chr7	-	2303	13	NNC	ENSG00000214783.9	novel	974	9	NA	NA	-10	5446	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_2	139.871642547333	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTGCTTTCTTTG	-22	True	NA	-12	True	AATAAA	-21	NA	44019185	43960893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_43961746_43961972_43962091_43965866_43965962_43966263_43966396_43972629_43972692_43973209_43973324_43986600_43986678_43987677_43987889_43988085_43988248_44013592_44013680_44014605_44014784_44016433_44016524_44019060
transcript_164297.known	chr7	+	849	8	FSM	ENSG00000078967.13	ENST00000450743.5	849	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	20.1129463839811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGTTGTTATGATCTG	-12	True	NA	NA	False	NA	NA	NA	43926437	43952907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43926557_43928013_43928112_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_1643.known	chr1	-	568	1	FSM	ENSG00000272420.1	ENST00000607858.1	568	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTTGACCCACATTG	3677	False	NA	NA	False	AATAAA	-13	NA	2363628	2363060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2363100_2363600
transcript_164301.nic	chr7	-	1667	8	ISM	ENSG00000228903.7	ENST00000424092.2	1398	11	1338	-447	1338	340	3prime_fragment	FALSE	canonical	2	2	junction_4	27.7532862551299	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGGGGTCTTGTGA	6092	False	NA	NA	False	AGTAAA	-16	NA	44040554	44028886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_44029456_44029566_44029632_44030780_44030902_44034175_44034312_44036671_44036810_44038806_44038977_44039518_44039664_44040231
transcript_164302.known	chr7	+	3982	7	FSM	ENSG00000078967.13	ENST00000222402.8	3982	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	13.0256157883866	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGTCAATGATTTCCT	-14	True	NA	28	True	TATAAA	-20	NA	43926435	43956136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_164304.known	chr7	+	789	5	FSM	ENSG00000078967.13	ENST00000454350.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	25.4693443182191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCTCAGCCTGGCCCC	-8	True	NA	NA	False	NA	NA	NA	43926441	43953059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43926557_43938430_43938495_43948631_43948738_43950598_43950693_43952649
transcript_164307.nic	chr7	-	511	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	-36	72667	-10	-47222	5prime_fragment	FALSE	canonical	3	110	junction_1	190.222676531129	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	-22	True	NA	NA	False	ATTAAA	-18	NA	44019185	44013561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
transcript_164309.known	chr7	-	324	3	FSM	ENSG00000272655.2	ENST00000418424.2	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	200.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGGCCTGGAGGGGC	50	False	NA	NA	False	NA	NA	NA	44019113	44014602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44014784_44016433_44016524_44019060
transcript_164316.known	chr7	+	2068	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_8	125.076310040444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	12	True	NA	24	True	NA	NA	NA	44044710	44061637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164319.known	chr7	+	2117	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_7	96.9540269062267	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	18	True	NA	25	True	NA	NA	NA	44044716	44061716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164325.known	chr7	+	1401	13	FSM	ENSG00000136279.21	ENST00000498733.5	1401	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	126.172143210069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTCAGACATGGCTTC	3	True	NA	NA	False	NA	NA	NA	44044701	44060939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044867_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164332.nnic	chr7	+	1921	12	NNC	ENSG00000136279.21	novel	1622	12	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.906988747167	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTCAGGAAAAGTAACAC	NA	False	NA	-4	True	NA	NA	NA	44044629	44061609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_44044821_44050224_44050265_44052910_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164333.nnic	chr7	+	2028	12	NNC	ENSG00000136279.21	novel	2117	13	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.906988747167	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	NA	False	NA	25	True	NA	NA	NA	44044629	44061716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_44044821_44050224_44050265_44052910_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164342.known	chr7	+	1513	12	FSM	ENSG00000136279.21	ENST00000452943.5	1513	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	132.991766351738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCTGCCTGTGGCCA	3	True	NA	NA	False	NA	NA	NA	44044701	44061172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164345.known	chr7	+	1622	12	FSM	ENSG00000136279.21	ENST00000429716.5	1622	12	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	117.702524601304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACCCTTGGGAACAGT	9	True	NA	-74	True	NA	NA	NA	44044707	44061328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164353.known	chr7	+	1447	11	FSM	ENSG00000136279.21	ENST00000411855.5	1447	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	135.031996208306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATCTGGGAGGCTCTG	21	True	NA	NA	False	NA	NA	NA	44044719	44061237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164356.known	chr7	+	1415	11	FSM	ENSG00000136279.21	ENST00000440166.5	1415	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	121.822165470821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTGCCCCTGACAGGA	-23	True	NA	NA	False	NA	NA	NA	44044675	44061145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_164362.known	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-1	True	NA	0	True	AATAAA	-17	NA	44065567	44062726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44062931_44064831_44065013_44065115
transcript_164363.known	chr7	+	615	2	FSM	ENSG00000136279.21	ENST00000439983.5	615	2	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATCACTGCAGATAGTCA	-23	True	NA	NA	False	NA	NA	NA	44044675	44050694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224
transcript_16437.known	chr1	+	13937	17	FSM	ENSG00000143190.23	ENST00000541643.7	13937	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	16.4502089652381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTTCTTTGAAATTG	11	True	NA	36	True	ATTAAA	-26	NA	167220897	167427345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167220959_167303473_167303575_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_164373.known	chr7	-	2561	11	FSM	ENSG00000122678.17	ENST00000430942.5	2561	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	17.7211737760229	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGCAGTAAAGTTGA	-14	True	NA	NA	False	ATTAAA	-11	NA	44082514	44072261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074221_44074397_44074531_44076508_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_164376.nic	chr7	-	2700	11	NIC	ENSG00000122678.17	novel	2806	11	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	7.91264810287934	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGACTCTTGGGGTGC	NA	False	NA	NA	False	ATTAAA	-23	NA	44082559	44072249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44073431_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_164379.nic	chr7	-	2513	10	NIC	ENSG00000122678.17	novel	2806	11	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	15.1372323252679	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	44082559	44072246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_16438.known	chr1	+	13843	16	FSM	ENSG00000143190.23	ENST00000367866.7	13843	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	7.53539794717056	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGGAGTTTCTTTGA	-1	True	NA	31	True	ATTAAA	-21	NA	167220885	167427340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_164382.known	chr7	-	2444	10	FSM	ENSG00000122678.17	ENST00000335195.10	2444	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.3293863807367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	36	False	NA	NA	False	ATTAAA	-26	NA	44082464	44072246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074397_44074523_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_164415.known	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.0682982984848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	22	True	NA	NA	False	NA	NA	NA	44082478	44075718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_164417.known	chr7	-	1149	5	FSM	ENSG00000122678.17	ENST00000492312.5	1149	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	1.80277563773199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTACAGGCATGTGCCA	16	True	NA	NA	False	NA	NA	NA	44082484	44078350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_164423.nnic	chr7	+	4104	22	NNC	ENSG00000106624.11	novel	4097	21	NA	NA	-62	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.9051728287535	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGCTCACATTCTGAG	132	False	NA	14	True	AATAAA	-15	NA	44104282	44114560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_44104629_44104683_44104919_44106545_44106888_44107438_44107511_44107628_44107701_44107808_44107932_44108006_44108085_44108898_44108977_44109106_44109185_44109287_44109342_44110014_44110125_44110206_44110347_44110724_44110810_44110912_44111058_44111153_44111240_44111506_44111631_44111853_44112051_44112141_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
transcript_164431.known	chr7	+	4097	21	FSM	ENSG00000106624.11	ENST00000223357.8	4097	21	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	26.8441800023767	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGCTCACATTCTGAG	-4	True	NA	14	True	AATAAA	-15	NA	44104344	44114560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44104919_44106545_44106888_44107438_44107511_44107628_44107701_44107808_44107932_44108006_44108085_44108898_44108977_44109106_44109185_44109287_44109342_44110014_44110125_44110206_44110347_44110724_44110810_44110912_44111058_44111153_44111240_44111506_44111631_44111853_44112051_44112141_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
transcript_164466.known	chr7	-	2158	12	FSM	ENSG00000106628.12	ENST00000406581.6	2158	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	636.687852473725	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGCCCTGGGCACTC	159	False	NA	-24	True	AATAAA	-23	NA	44123508	44114686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122196_44122281_44122460_44123178
transcript_16447.nic	chr1	+	1993	12	ISM	ENSG00000143190.23	ENST00000367866.7	13843	16	-606	28049	-596	2466	5prime_fragment	FALSE	canonical	3	37	junction_7	7.42566467514987	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAACCCACCAAGCAGT	91	False	NA	NA	False	AAGAAA	-4	NA	167220279	167399291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185
transcript_164472.nic	chr7	-	1584	11	NIC	ENSG00000106628.12	novel	1609	11	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	523.784115833995	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGCCCTGGGCACTC	74	False	NA	-24	True	AATAAA	-23	NA	44123593	44114686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116210_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_164483.known	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_10	252.650034632889	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-7	True	NA	-17	True	AATAAA	-30	NA	44123548	44114679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_164485.nnic	chr7	-	1693	11	NIC	ENSG00000106628.12	novel	2158	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_10	495.022423734521	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGCCCTGGGCACTC	-12	True	NA	-24	True	AATAAA	-23	NA	44123553	44114686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122196_44123510
transcript_164486.known	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	484.63165393936	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	11	True	NA	-31	True	GGGGCT	-11	NA	44123530	44114784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
transcript_16453.known	chr1	-	1078	6	FSM	ENSG00000198821.11	ENST00000470379.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.93907194296653	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGGAAAGGAGCCTAG	NA	False	NA	NA	False	NA	NA	NA	167439640	167431172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343
transcript_164548.known	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	26.1512693552127	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-2	True	NA	-4	True	AATAAA	-20	NA	44141332	44138863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
transcript_16455.known	chr1	-	1969	4	FSM	ENSG00000143162.9	ENST00000370509.5	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	41.8754767800386	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGATTCGTTTTCTT	0	True	NA	NA	False	ATTAAA	-19	NA	167553762	167541012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167542302_167546100_167546286_167548001_167548122_167553387
transcript_164551.nic	chr7	-	926	6	NIC	ENSG00000106631.8	novel	612	7	NA	NA	-30	0	intron_retention	FALSE	canonical	3	98	junction_5	27.6	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	180	False	NA	-4	True	AATAAA	-20	NA	44141362	44138863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140788_44140960_44141075_44141302
transcript_164553.known	chr7	-	791	6	FSM	ENSG00000106631.8	ENST00000458240.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	13.720058308914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGTGGTGTCTTGTC	257	False	NA	-6	True	AATAAA	-18	NA	44141285	44138865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960
transcript_164554.known	chr7	-	646	6	FSM	ENSG00000106631.8	ENST00000457314.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	53.4288311681998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	468	False	NA	-9	True	AATAAA	-15	NA	44141074	44138868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140857_44140960
transcript_164555.nic	chr7	-	1473	3	ISM	ENSG00000106633.18	ENST00000672743.1	846	4	-202	503	3	0	5prime_fragment	FALSE	canonical	3	6	junction_2	30.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	NA	False	NA	-4	True	ATTAAA	-19	NA	44146141	44144274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_44145281_44145496_44145731_44145908
transcript_164556.known	chr7	-	1311	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	NA	False	NA	-4	True	ATTAAA	-19	NA	44146144	44144274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44145281_44145496_44145731_44146073
transcript_164558.known	chr7	-	1641	2	FSM	ENSG00000106633.18	ENST00000459642.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGTCCACTGTTCTTT	NA	False	NA	-2	True	ATTAAA	-21	NA	44146129	44144272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44145281_44145496
transcript_164560.known	chr7	+	2786	8	FSM	ENSG00000106636.9	ENST00000679209.1	2786	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	209.884905291895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGATAAAGTTGTCT	-10	True	NA	-2	True	NA	NA	NA	44200977	44214264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44201240_44204567_44204651_44205582_44205632_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
transcript_164562.known	chr7	+	1085	8	FSM	ENSG00000106636.9	ENST00000677090.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	208.564774844945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAGGTCGGAGCCAGC	24	True	NA	68	True	NA	NA	NA	44201011	44212595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44211553_44211605_44212246
transcript_164566.known	chr7	+	2737	7	FSM	ENSG00000106636.9	ENST00000677436.1	2737	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	171.775693533424	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTTGAAATTTCACA	-5	True	NA	10	True	NA	NA	NA	44200982	44214276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44201240_44204574_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
transcript_164569.known	chr7	+	1270	6	FSM	ENSG00000106636.9	ENST00000496112.5	1270	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	186.442055341599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGGCTTCCCGCAGAGG	-20	True	NA	NA	False	NA	NA	NA	44200967	44212889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44212246
transcript_164582.known	chr7	-	8036	6	FSM	ENSG00000015676.18	ENST00000355451.8	8036	6	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_2	22.6627447587445	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGTTGCTTTTCT	-22	True	NA	-9	True	TATAAA	-7	NA	44490658	44379118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44427570_44427704_44484967_44485285_44490408
transcript_164587.known	chr7	+	408	1	FSM	ENSG00000146677.7	ENST00000487895.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCGTGTGCACGTTTT	24	False	NA	NA	False	AAGAAA	-9	NA	44467896	44468304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44467900_44468300
transcript_164599.nnic	chr7	-	3580	18	Fusion	ENSG00000136271.11_ENSG00000158604.15	novel	1855	14	NA	NA	20	0	multi-exon	FALSE	canonical	0	0	junction_14	108.68544498486	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	17	False	NA	-17	True	AATAAA	-17	NA	44582267	44565803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572573_44572745_44572889_44573051_44573582_44573745_44573835_44575039_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_164613.known	chr7	-	1853	14	FSM	ENSG00000136271.11	ENST00000446987.5	1853	14	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_10	78.1776916983991	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	20	True	NA	-17	True	AATAAA	-17	NA	44573895	44565803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572562_44572745_44572889_44573051_44573582_44573745_44573835
transcript_16462.known	chr1	+	3421	3	FSM	ENSG00000197965.12	ENST00000392121.7	3421	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	407	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTTGTGTGCTCA	-1	True	NA	21	True	AATACA	-15	NA	167721988	167790819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582_167765750_167787819
transcript_164620.nnic	chr7	-	917	5	NNC	ENSG00000158604.15	novel	1755	4	NA	NA	20	2403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.65757000393	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGGGTTGAGGGGACA	17	False	NA	NA	False	AAAAAG	-9	NA	44582267	44575490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_44575666_44580945_44581240_44581448_44581575_44581722_44581824_44582046
transcript_164623.known	chr7	-	2294	5	FSM	ENSG00000158604.15	ENST00000457408.7	2294	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	215.65757000393	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-10	True	NA	NA	False	ATTAAA	-23	NA	44582231	44577893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_164625.known	chr7	-	2203	4	FSM	ENSG00000158604.15	ENST00000289577.9	2203	4	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_1	222.15460082264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-3	True	NA	NA	False	ATTAAA	-23	NA	44582287	44577893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44579629_44581448_44581575_44581722_44581824_44582046
transcript_164627.known	chr7	-	545	4	FSM	ENSG00000158604.15	ENST00000444131.2	545	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	222.652195138516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGCATATCTCCTTGT	-20	True	NA	NA	False	NA	NA	NA	44582241	44581092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44581240_44581448_44581575_44581722_44581807_44582053
transcript_164629.known	chr7	-	1950	3	FSM	ENSG00000158604.15	ENST00000477639.5	1950	3	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	93	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTAGTAATAGCCATTG	11	True	NA	-15	True	AATAAA	-20	NA	44582210	44579903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44581240_44581448_44581575_44581722
transcript_16463.known	chr1	+	607	2	FSM	ENSG00000197965.12	ENST00000464954.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAAATAAGTTCAGCAT	0	True	NA	NA	False	NA	NA	NA	167721949	167765896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582
transcript_164632.known	chr7	+	3309	24	FSM	ENSG00000105953.16	ENST00000444676.5	3309	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	116.023936647729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTTAGGCTGTCGTCCC	1	True	NA	NA	False	NA	NA	NA	44606627	44708138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44656317_44656363_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_16464.known	chr1	+	1305	4	FSM	ENSG00000197965.12	ENST00000465787.5	1305	4	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_2	61.0300472445063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAGAAGA	3	True	NA	NA	False	TTTAAA	-13	NA	167721992	167773909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235
transcript_164640.known	chr7	+	3479	23	FSM	ENSG00000105953.16	ENST00000449767.5	3479	23	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	111.080019180576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGGAACTGGGCCTTGT	0	True	NA	NA	False	NA	NA	NA	44606590	44708328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647443_44647535_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_164649.known	chr7	+	4193	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	35.2865483699918	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	0	True	NA	8	True	CATAAA	-17	NA	44606626	44709066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_16467.known	chr1	+	3302	20	FSM	ENSG00000143164.16	ENST00000367843.7	3302	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	34.9334943925012	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTTTATTTAATGC	-26	True	NA	17	True	ATTAAA	-29	NA	167936660	168075843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168022987_168023048_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_164678.known	chr7	+	1744	9	FSM	ENSG00000105953.16	ENST00000443864.6	1744	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	41.8292660705397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATGTGTGTGTGTGTG	-3	True	NA	12	True	AATAAA	-24	NA	44606587	44676594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969
transcript_164688.known	chr7	+	863	6	FSM	ENSG00000196262.15	ENST00000415933.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8547.84226340192	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	1	True	NA	-1	True	AATAAA	-10	NA	44796681	44801624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
transcript_164689.known	chr7	+	818	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	8048.95907804233	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	0	True	NA	6	True	AATAAA	-17	NA	44796680	44801631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_16469.known	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	16.9934627953745	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	21	True	NA	8	True	ATTAAA	-20	NA	167936707	168075834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_164690.known	chr7	+	907	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	8056.84866433521	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	0	True	NA	5	True	AATAAA	-16	NA	44796680	44801630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_164692.known	chr7	+	2237	5	FSM	ENSG00000196262.15	ENST00000468812.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	16368	junction_4	867.485554634773	2148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTAGTATTTCTTATTCC	0	True	NA	36	True	AATAAA	-21	NA	44796680	44803117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_164694.known	chr7	+	2146	4	FSM	ENSG00000196262.15	ENST00000676977.1	2146	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8295.88397272339	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	0	True	NA	34	True	AATAAA	-19	NA	44796680	44803115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44799246_44799278_44799701_44799875_44801286
transcript_164701.known	chr7	-	3804	5	FSM	ENSG00000105968.19	ENST00000222690.10	3804	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	1007.59475360881	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTATGGACTAAATATTT	1	True	NA	-4	True	ATTAAA	-18	NA	44848077	44826790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44830164_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_164705.known	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2098	junction_4	183.778909290484	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-9	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_164709.known	chr7	-	687	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	1123.51393207007	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	2	True	NA	-22	True	GATAAA	-20	NA	44848076	44834227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
transcript_164710.known	chr7	-	596	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	1040.01185890675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	57	False	NA	-22	True	GATAAA	-20	NA	44848021	44834227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
transcript_164711.known	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	962.819124585021	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-2	True	NA	-33	True	GATAAA	-9	NA	44848080	44834238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
transcript_164715.known	chr7	-	1041	4	FSM	ENSG00000105968.19	ENST00000446531.1	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	2098	junction_3	203.697488120661	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTCCCAGCTACTCAGG	-5	True	NA	NA	False	AATACA	-30	NA	44848083	44834924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44835659_44840898_44841013_44843276_44843355_44847968
transcript_164719.known	chr7	-	3228	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTAAATATGTGATTTA	-2	True	NA	-19	True	AATAAA	-4	NA	44986693	44983038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44986098_44986524
transcript_164720.known	chr7	-	1626	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	5	-5	-3	multi-exon	FALSE	canonical	3	409	junction_1	55	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	156	False	NA	-8	True	AATAAA	-15	NA	44986674	44983027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44984427_44986020_44986098_44986524
transcript_164721.known	chr7	-	3116	2	FSM	ENSG00000232956.10	ENST00000577700.5	3116	2	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-1	True	NA	-3	True	AATAAA	-20	NA	44986637	44983022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821
transcript_164722.known	chr7	-	1123	4	FSM	ENSG00000232956.10	ENST00000667823.2	1124	4	0	1	0	-1	multi-exon	FALSE	canonical	3	409	junction_2	46.8069320602076	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	162	False	44986691	-6	True	AATAAA	-17	NA	44986668	44983025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984427_44986020_44986098_44986524
transcript_164723.known	chr7	-	731	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_2	224.423706412669	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-20	True	NA	-6	True	AATAAA	-17	NA	44986656	44983025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
transcript_164724.known	chr7	-	953	5	FSM	ENSG00000232956.10	ENST00000585030.6	956	5	0	3	0	-1	multi-exon	FALSE	canonical	3	13	junction_3	204.917666393115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	161	False	44986691	-6	True	AATAAA	-17	NA	44986669	44983025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44985881_44986098_44986524
transcript_164725.known	chr7	-	1346	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_2	47.6818157745231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	131	False	NA	-3	True	AATAAA	-20	NA	44986699	44983022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
transcript_164729.known	chr7	+	1983	10	FSM	ENSG00000136280.17	ENST00000461377.5	1983	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	116.776879159245	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	NA	False	NA	-62	True	NA	NA	NA	44999474	45076352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_164734.known	chr7	+	1864	10	FSM	ENSG00000136280.17	ENST00000258781.11	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	59.150362907583	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	-3	True	NA	39	True	AAAAAG	-28	NA	45000200	45076453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_164739.nnic	chr7	+	1650	9	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	260	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	132.207223705817	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	NA	False	NA	39	True	AAAAAG	-28	NA	44999734	45076453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_44999858_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_16474.nic	chr1	+	2351	15	ISM	ENSG00000143164.16	ENST00000312263.10	3186	19	-70	12164	-23	-297	5prime_fragment	FALSE	canonical	3	80	junction_10	19.1898410623955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAATGGAAGAATTG	NA	False	NA	NA	False	AAGAAA	-1	NA	167936637	168063670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620
transcript_164741.nic	chr7	+	1745	9	NIC	ENSG00000136280.17	novel	1864	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	139.139711710927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	12	False	NA	39	True	AAAAAG	-28	NA	45000182	45076453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_164742.known	chr7	+	1719	9	FSM	ENSG00000136280.17	ENST00000541586.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	102.509069720684	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTGATCCAGTTGGG	-16	True	NA	55	True	AAAAAG	-44	NA	45000187	45076469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45000364_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_164745.known	chr7	+	1620	8	FSM	ENSG00000136280.17	ENST00000544363.5	1620	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	144.020548420519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTGATCCAGTTGGG	-16	True	NA	55	True	AAAAAG	-44	NA	45000187	45076469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_16475.known	chr1	+	2803	12	FSM	ENSG00000143164.16	ENST00000470721.5	2803	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	49.6450208900505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATTAATTA	-14	True	NA	NA	False	AATATA	-18	NA	167936672	168024050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168019544_168019668_168022987
transcript_164756.nnic	chr7	+	1283	5	NIC	ENSG00000136280.17	novel	1864	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	171.026861925254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	12	False	NA	39	True	AAAAAG	-28	NA	45000182	45076453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_45000364_45038252_45038427_45073459_45073572_45074269_45074409_45075776
transcript_164767.known	chr7	-	4836	8	FSM	ENSG00000136274.9	ENST00000490531.3	4836	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	9.19183310979738	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTCTGGTGTCTCCTC	-22	True	NA	-5	True	AATAAA	-15	NA	45088969	45080436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45080524_45080639_45080763_45080875_45081023_45081116_45081264_45081600_45081673_45081754_45081868_45082107_45086113_45088827
transcript_164796.known	chr7	-	2190	11	FSM	ENSG00000136270.14	ENST00000494076.5	2190	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	208.175526899778	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	-3	True	NA	-3	True	NA	NA	NA	45111706	45100100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109244_45111642
transcript_16480.known	chr1	-	2177	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_3	49.7543967906355	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTTTCACTTCCTT	-18	True	NA	-12	True	ATTAAA	-12	NA	167936040	167916728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
transcript_164800.known	chr7	-	2226	11	FSM	ENSG00000136270.14	ENST00000258770.8	2226	11	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	70.4204515748089	2483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	6	True	NA	-2	True	NA	NA	NA	45111697	45100099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
transcript_164801.nic	chr7	-	2571	11	NIC	ENSG00000136270.14	novel	2226	11	NA	NA	-17	0	intron_retention	FALSE	canonical	3	120	junction_10	179.011619734586	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	NA	False	NA	-3	True	NA	NA	NA	45112064	45100100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111663
transcript_16481.known	chr1	-	522	1	FSM	ENSG00000224837.1	ENST00000443090.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAACTCCTAAATAAA	NA	False	NA	NA	False	CATAAA	-17	NA	168056422	168055900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168055900_168056400
transcript_164880.known	chr7	-	1917	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	217.327769452042	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-15	True	NA	-2	True	NA	NA	NA	45111718	45100099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
transcript_164881.known	chr7	-	2225	9	FSM	ENSG00000136270.14	ENST00000395655.8	2225	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	273.386145177476	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-2	True	NA	NA	NA	45112047	45100099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111663
transcript_164944.known	chr7	+	1323	3	FSM	ENSG00000122679.8	ENST00000242249.8	1323	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTGTTTCATGT	-21	True	NA	4	True	AGTAAA	-19	NA	45157790	45184250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45157887_45177308_45177442_45183156
transcript_164950.nnic	chr7	-	1786	11	FSM	ENSG00000214765.9	ENST00000686085.1	1822	11	34	2	-1	0	multi-exon	FALSE	canonical	3	74	junction_1	26.1426854014655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	-5	True	NA	-2	True	NA	NA	NA	45768980	45726332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_164954.nic	chr7	-	925	6	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	-38	20039	-33	9340	5prime_fragment	FALSE	canonical	3	111	junction_1	21.9399179579141	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTTAAAAAGATAAAGGT	NA	False	NA	NA	False	AATATA	-38	NA	45769075	45748643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_164957.nnic	chr7	-	2313	5	NNC	ENSG00000146674.16	novel	2613	5	NA	NA	0	-107	intron_retention	FALSE	canonical	2	3	junction_1	32.0663374896479	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCCCTTTGTTATTG	-1	True	NA	-15	True	AATAAA	-20	NA	45921272	45912351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_45913642_45914804_45914946_45916547_45916668_45917212_45917440_45920737
transcript_164958.known	chr7	-	2613	5	FSM	ENSG00000146674.16	ENST00000613132.5	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	8.26135582092915	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGCTGTAGTGGAAAAC	-1	True	NA	92	True	AATAAA	-20	NA	45921272	45912244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45913835_45914804_45914946_45916547_45916668_45917212_45917440_45920737
transcript_164962.known	chr7	-	7585	31	FSM	ENSG00000136205.17	ENST00000311160.14	7585	31	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_30	18.2879438124927	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCGTGAGACGGTATTT	-13	True	NA	-16	True	AATAAA	-17	NA	47582111	47275153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47582050
transcript_164970.nic	chr7	-	2341	9	NIC	ENSG00000136273.13	novel	1304	9	NA	NA	-67	-66	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	24.4716034415402	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGGCTTAAGATTT	NA	False	NA	-21	True	AATACA	-18	NA	47979682	47963353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_164971.known	chr7	-	3007	8	FSM	ENSG00000136273.13	ENST00000258774.10	3007	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	16.5591087209624	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGGTGTCTGTTTCTG	3	True	NA	-1	True	AAGAAA	-18	NA	47979615	47963287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_164973.known	chr7	-	548	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCCTCATTTTAAAATT	2	True	NA	NA	False	TTTAAA	-43	NA	47979553	47978259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47978594_47978688_47978817_47979467
transcript_164975.known	chr7	-	1125	8	FSM	ENSG00000136273.13	ENST00000432325.5	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	40.9020731972932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTCTGTTTTGCT	2	True	NA	-6	True	GATAAA	-15	NA	47979553	47965165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_164976.known	chr7	+	2102	9	FSM	ENSG00000164746.14	ENST00000348904.4	2102	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.05326872164704	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGTTTGTTTTTTCC	-2	True	NA	NA	False	AATAAA	-18	NA	48035542	48061297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_48035631_48036207_48036364_48041333_48041520_48043480_48043590_48046459_48046617_48049879_48049978_48052699_48052924_48054594_48054607_48060225
transcript_164979.known	chr7	+	1932	10	FSM	ENSG00000183696.14	ENST00000331803.8	1932	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	121.656163930243	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTGCAATGAGAGATGA	39	False	NA	NA	False	ATTAAA	-14	NA	48088643	48108733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_48088924_48089211_48089419_48090249_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_164981.nic	chr7	+	1337	9	NIC	ENSG00000183696.14	novel	918	7	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	109.148909179158	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	227	False	NA	14	True	ATTAAA	-15	NA	48089492	48108419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_164989.known	chr7	+	782	6	FSM	ENSG00000183696.14	ENST00000417464.6	782	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	115.481600266016	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	110	False	NA	14	True	ATTAAA	-15	NA	48089375	48108419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_48089419_48090249_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_164990.nic	chr7	+	945	6	NIC	ENSG00000183696.14	novel	918	7	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	85.4063229509385	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	227	False	NA	14	True	ATTAAA	-15	NA	48089492	48108419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_164995.known	chr7	+	955	6	FSM	ENSG00000183696.14	ENST00000395560.7	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	68.6364334737754	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	-1	True	NA	14	True	ATTAAA	-15	NA	48089264	48108419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_164996.known	chr7	-	582	4	FSM	ENSG00000132436.12	ENST00000422854.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	9.10433352249844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTCAATAAATAATGTT	-19	True	NA	NA	False	NA	NA	NA	50450368	50446980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50447298_50447967_50448056_50448180_50448290_50450300
transcript_164997.known	chr7	-	3368	3	FSM	ENSG00000132436.12	ENST00000615084.4	3368	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTGCATTCTAAATTG	NA	False	NA	-14	True	ATTAAA	-23	NA	50450390	50444128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50447298_50448180_50448290_50450300
transcript_16501.nnic	chr1	-	2682	7	NIC	ENSG00000143147.15	novel	2676	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	40.260609367801	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	-8	True	NA	-15	True	NA	NA	NA	168136945	168085265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168114455_168114550_168136256
transcript_16502.nnic	chr1	-	2248	7	NIC	ENSG00000143147.15	novel	2400	7	NA	NA	-63	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	39.1553175046364	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	690	False	NA	-15	True	NA	NA	NA	168136993	168085265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168114455_168114550_168136738
transcript_165020.known	chr7	-	5431	18	FSM	ENSG00000106070.20	ENST00000644769.1	5431	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	221.067667230669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATTGCTGGTGATA	480	False	NA	-11	True	AATAAA	-20	NA	50792969	50590068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50755886_50756057_50792441
transcript_165021.nic	chr7	-	2862	18	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	31	junction_17	201.32558972864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-28	True	NA	-20	True	ATTAAA	-14	NA	50782912	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50782423
transcript_165033.known	chr7	-	5032	17	FSM	ENSG00000106070.20	ENST00000335866.7	5032	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_16	153.544769021123	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGGTGATATCTGTT	-13	True	NA	-5	True	AATAAA	-26	NA	50793462	50590062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50793223
transcript_165042.nnic	chr7	-	2689	17	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	186.036360273335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-25	True	NA	-20	True	ATTAAA	-14	NA	50782909	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50782423
transcript_165044.nic	chr7	-	2765	17	NIC	ENSG00000106070.20	novel	2299	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_16	177.336720675668	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-28	True	NA	-20	True	ATTAAA	-14	NA	50782912	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50782423
transcript_165045.nnic	chr7	-	2725	17	NNC	ENSG00000106070.20	novel	5431	18	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_16	178.242099667138	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-18	True	NA	-20	True	ATTAAA	-14	NA	50792909	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50792460
transcript_165049.nnic	chr7	-	5055	16	NNC	ENSG00000106070.20	novel	5431	18	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_15	161.623623135839	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATTGCTGGTGATA	-7	True	NA	-11	True	AATAAA	-20	NA	50792898	50590068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50792460
transcript_165057.nnic	chr7	-	2596	16	NIC	ENSG00000106070.20	novel	2319	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_15	153.147800796776	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-29	True	NA	-20	True	ATTAAA	-14	NA	50782913	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50782423
transcript_165058.nnic	chr7	-	2662	16	NNC	ENSG00000106070.20	novel	2319	16	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_15	161.623623135839	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	433	False	NA	-20	True	ATTAAA	-14	NA	50793016	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50792460
transcript_165059.known	chr7	-	2319	16	FSM	ENSG00000106070.20	ENST00000402497.6	2319	16	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_15	133.612208357703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	13	True	NA	-20	True	ATTAAA	-14	NA	50793436	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50793223
transcript_165063.known	chr7	-	3888	16	FSM	ENSG00000106070.20	ENST00000644879.1	3888	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	213.767620456316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAATTCTCACGTTCACA	765	False	NA	NA	False	NA	NA	NA	50792684	50591122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50755886_50756057_50792441
transcript_165069.nnic	chr7	-	2507	15	NIC	ENSG00000106070.20	novel	2319	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	168.347793546089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-28	True	NA	-20	True	ATTAAA	-14	NA	50782912	50592579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50782423
transcript_16507.nnic	chr1	-	2257	7	NIC	ENSG00000143147.15	novel	8256	7	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	46.1064589353331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	718	False	NA	-15	True	NA	NA	NA	168136965	168085265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168134905_168135037_168136738
transcript_16508.known	chr1	-	8256	7	FSM	ENSG00000143147.15	ENST00000537209.5	8256	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	46.8176130199831	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTGGAAATGGTGAAT	16	False	NA	-30	True	ATTAAA	-19	NA	168137667	168079542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168134905_168135037_168137164
transcript_165087.known	chr7	-	5339	14	FSM	ENSG00000106078.19	ENST00000395542.6	5339	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	11.3643270365685	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTGTGTGAATTTCAT	93	False	51316832	-2	True	AATAAA	-16	NA	51316818	51016212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_51017569_51025108_51025232_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_165090.nic	chr7	-	5583	14	NIC	ENSG00000106078.19	novel	5339	14	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	16.7448658562671	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTGTGTGAATTTCAT	-10	False	NA	-2	True	AATAAA	-16	NA	51316921	51016212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_165092.nic	chr7	-	5284	14	NIC	ENSG00000106078.19	novel	5339	14	NA	NA	0	-187	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	16.7448658562671	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATGGTGAGGTCACTT	-20	True	NA	NA	False	AATAAA	-22	NA	51316809	51016399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_165093.nic	chr7	-	4516	14	NIC	ENSG00000106078.19	novel	5339	14	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	16.7448658562671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACTATAAATGCTGGAG	-10	False	NA	NA	False	AATAAA	-22	NA	51316921	51017279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_165095.known	chr7	-	5301	13	FSM	ENSG00000106078.19	ENST00000265136.12	5301	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	20.9727005096308	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTGTGAATTTCATA	-20	True	NA	-1	True	AATAAA	-17	NA	51316809	51016211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_165099.known	chr7	-	2332	8	FSM	ENSG00000106078.19	ENST00000395540.6	2332	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.8187177017251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAGACTCTGCTTTCA	93	False	51316832	NA	False	NA	NA	NA	51316818	51064398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_51065450_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_165107.nic	chr7	-	1029	5	ISM	ENSG00000106078.19	ENST00000648294.1	1401	8	-154	101086	-103	6854	5prime_fragment	FALSE	canonical	3	51	junction_1	8.87411967464942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGATTTTTCAAAGT	-10	False	NA	NA	False	GATAAA	-13	NA	51316921	51184143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_165109.known	chr7	-	512	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	2042.14413464541	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAATATCTCTTTTTT	-1	True	NA	-25	True	ATTAAA	-13	NA	54759182	54752256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
transcript_16511.nnic	chr1	-	2615	6	NIC	ENSG00000143147.15	novel	2676	8	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	34.2029238516241	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	711	False	NA	-15	True	NA	NA	NA	168136972	168085265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168136256
transcript_165110.known	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_3	770.798719943583	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-7	True	NA	-21	True	ATTAAA	-17	NA	54759211	54752252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
transcript_165113.known	chr7	+	9905	28	FSM	ENSG00000146648.20	ENST00000275493.7	9905	28	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	2.89789668770645	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGTTGGTACTAGTTA	-1	True	NA	13	True	NA	NA	NA	55019016	55211628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55019366_55142285_55142438_55143304_55143489_55146605_55146741_55151293_55151363_55152545_55152665_55154010_55154153_55155829_55155947_55156532_55156660_55156758_55156833_55157662_55157754_55160138_55160339_55161498_55161632_55163732_55163824_55165279_55165438_55171174_55171214_55172982_55173125_55173920_55174044_55174721_55174821_55181292_55181479_55191718_55191875_55192765_55192842_55198716_55198864_55200315_55200414_55201187_55201356_55201734_55201783_55202516_55202626_55205255
transcript_165117.known	chr7	+	4459	9	FSM	ENSG00000132434.10	ENST00000254770.3	4459	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	9.42652507555144	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCGTCATTCGTTTTC	3	True	NA	20	True	AGTAAA	-25	NA	55365336	55433737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55366230_55391792_55391911_55398422_55398631_55399956_55400105_55401173_55401321_55411906_55412090_55425253_55425431_55428374_55428448_55431225
transcript_16512.known	chr1	-	7815	6	FSM	ENSG00000143147.15	ENST00000682931.1	7815	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	26.1273802743406	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGAAATGGTGAATT	7	True	NA	-29	True	ATTAAA	-20	NA	168136930	168079541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168136738
transcript_165124.known	chr7	-	2939	5	FSM	ENSG00000154978.13	ENST00000285279.10	2939	5	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	71.6467026456905	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGATTGTTTTGTT	7	True	NA	-9	True	AATAAA	-15	NA	55572502	55470612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_55473046_55492281_55492419_55497612_55497691_55521071_55521131_55572270
transcript_165133.known	chr7	+	1993	10	FSM	ENSG00000146729.10	ENST00000322090.8	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_6	52.0934582751206	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACGTTTGGATTTTCTT	-8	True	NA	28	True	AATAAA	-19	NA	55964584	56000179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55964702_55978125_55978266_55978349_55978396_55981472_55981568_55982209_55982281_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
transcript_16514.known	chr1	-	7806	6	FSM	ENSG00000143147.15	ENST00000271357.9	7806	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	38.4884398228871	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTGGAAATGGTGAAT	110	False	NA	-30	True	ATTAAA	-19	NA	168137573	168079542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168137389
transcript_165141.known	chr7	+	1882	8	FSM	ENSG00000146729.10	ENST00000446778.5	1882	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	408.77053090796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTTGGATTTTCTTTT	-12	True	NA	30	True	AATAAA	-21	NA	55964580	56000181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55964702_55978125_55978266_55981472_55981568_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
transcript_165147.known	chr7	+	1786	3	FSM	ENSG00000239789.6	ENST00000285298.9	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	157.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	0	True	NA	18	True	AATAAA	-15	NA	55951876	55956500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55951931_55953178_55953319_55954908
transcript_16515.known	chr1	-	7655	5	FSM	ENSG00000143147.15	ENST00000539777.5	7655	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	43.5143654440692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTGGAAATGGTGAAT	976	False	NA	-30	True	ATTAAA	-19	NA	168136707	168079542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168136256
transcript_165150.known	chr7	+	718	3	FSM	ENSG00000239789.6	ENST00000443449.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	348.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGCGGGAGTGGAAG	39	False	NA	-72	True	NA	NA	NA	55951962	55955172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55952277_55953178_55953319_55954908
transcript_165163.nic	chr7	-	2283	9	NIC	ENSG00000146733.14	novel	2178	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	51	junction_7	181.828516396631	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-18	True	NA	-24	True	AATAAA	-17	NA	56051595	56011067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033380_56033495_56033960_56034155_56051137
transcript_165175.known	chr7	-	1974	8	FSM	ENSG00000146733.14	ENST00000275605.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	150.438271292207	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-13	True	NA	-20	True	AATAAA	-21	NA	56051444	56011063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034107_56051137
transcript_165176.known	chr7	-	2178	8	FSM	ENSG00000146733.14	ENST00000395471.7	2178	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_7	119.86182521077	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-27	True	NA	-24	True	AATAAA	-17	NA	56051604	56011067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56051137
transcript_165185.nic	chr7	-	2083	8	NIC	ENSG00000146733.14	novel	2178	8	NA	NA	44	0	intron_retention	FALSE	canonical	3	49	junction_7	138.265641990706	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	17	True	NA	-24	True	AATAAA	-17	NA	56051560	56011067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034104_56051137
transcript_165194.nic	chr7	-	2439	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17264	-698	-8	685	3prime_fragment	FALSE	canonical	3	410	junction_2	17.1925371406705	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGCCTATATAAACCAT	20	False	56034200	45	True	ATTAAA	-14	NA	56034180	56010365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_165197.nic	chr7	-	1790	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17211	4	-61	0	3prime_fragment	FALSE	canonical	3	410	junction_2	17.1925371406705	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	NA	False	NA	-24	True	AATAAA	-17	NA	56034233	56011067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_16520.nnic	chr1	+	2006	8	NNC	ENSG00000143155.13	novel	2998	7	NA	NA	-85	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	173.502925929572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAAAGTTTTACTATTT	NA	False	NA	11	True	AATAAA	-15	NA	168178876	168202106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902_168200705_168201778
transcript_165202.nic	chr7	-	1720	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17211	74	-61	-70	3prime_fragment	FALSE	canonical	3	410	junction_2	17.1925371406705	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGATTCGGCAGCCTTCA	NA	False	NA	-5	True	ATTAAA	-19	NA	56034233	56011137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_165206.nnic	chr7	-	1052	6	Fusion	ENSG00000146733.14_ENSG00000185290.4	novel	1409	7	NA	NA	10	0	multi-exon	TRUE	non_canonical	0	0	junction_1	88.4	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGTTCTGCCTCTTGC	4	True	NA	-7	True	AATAAA	-34	NA	56116407	56011050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_56011234_56011543_56011870_56020091_56020217_56021117_56021232_56116014_56116129_56116217
transcript_16521.known	chr1	+	2998	7	FSM	ENSG00000143155.13	ENST00000367833.7	2998	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	144.413757424053	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	4	True	NA	14	True	AATAAA	-18	NA	168178961	168202109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902
transcript_165214.nnic	chr7	-	926	5	Fusion	ENSG00000146733.14_ENSG00000185290.4	novel	1409	7	NA	NA	10	0	multi-exon	FALSE	non_canonical	0	0	junction_1	95.6958071181805	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGTTCTGCCTCTTGC	4	True	NA	-7	True	AATAAA	-34	NA	56116407	56011050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_56011234_56011543_56011870_56021118_56021232_56116014_56116129_56116217
transcript_165217.nnic	chr7	-	717	5	Fusion	ENSG00000146733.14_ENSG00000185290.4	novel	1409	7	NA	NA	134	-68	multi-exon	FALSE	non_canonical	0	0	junction_1	95.6958071181805	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTCGGCAGCCTTCAGT	128	False	NA	-3	True	ATTAAA	-21	NA	56116283	56011135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_56011234_56011543_56011870_56021118_56021232_56116014_56116129_56116217
transcript_165222.known	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2378	junction_7	278.997105030473	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	-13	True	NA	32	True	AATAAA	-18	NA	56051764	56063989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_165229.known	chr7	+	2529	13	FSM	ENSG00000146731.11	ENST00000335503.3	2529	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	806.457324764718	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	NA	False	NA	32	True	AATAAA	-18	NA	56051684	56063989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56051986_56052421_56052486_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_165234.nic	chr7	+	846	7	ISM	ENSG00000146731.11	ENST00000275603.9	2584	14	-3	5594	-3	-615	5prime_fragment	FALSE	canonical	3	2410	junction_3	176.601874911401	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAAAAACTCGT	-16	True	NA	19	True	AATAGA	-34	NA	56051761	56058395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361
transcript_165235.nic	chr7	+	965	7	ISM	ENSG00000146731.11	ENST00000275603.9	2584	14	-61	5533	19	-554	5prime_fragment	FALSE	canonical	3	2410	junction_3	176.601874911401	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGAACTGAAAAGGAAA	NA	False	NA	80	True	AAGAAA	-27	NA	56051703	56058456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361
transcript_165237.known	chr7	+	1171	10	FSM	ENSG00000129103.19	ENST00000413756.5	1171	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	171.711716490887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCCCTCTGTGGCAGG	6	True	NA	NA	False	NA	NA	NA	56064288	56079736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56078921_56079040_56079527
transcript_16524.known	chr1	+	11040	8	FSM	ENSG00000213064.10	ENST00000271375.7	11040	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	11.5493616750901	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTAGTGTTGTCTCTT	-20	True	NA	12	True	AATAAA	-22	NA	168226003	168253021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_165240.known	chr7	+	1990	9	FSM	ENSG00000129103.19	ENST00000434526.8	1990	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_5	21.9715725427198	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	3	True	NA	30	True	AATAAA	-24	NA	56064285	56080670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_165246.known	chr7	+	1792	8	FSM	ENSG00000129103.19	ENST00000423763.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	141.156881894304	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAAAATCTCCTGCAA	18	True	NA	-2	True	NA	NA	NA	56064300	56080638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_165247.known	chr7	+	2006	8	FSM	ENSG00000129103.19	ENST00000651586.1	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	136.936302784938	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	2528	False	NA	29	True	AATAAA	-23	NA	56064223	56080669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_165249.known	chr7	+	913	8	FSM	ENSG00000129103.19	ENST00000452216.5	913	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.604407876221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCCCATCCCTCTG	-18	True	NA	NA	False	NA	NA	NA	56064264	56079729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_165252.known	chr7	+	947	7	FSM	ENSG00000129103.19	ENST00000437307.6	947	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	164.262408629878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCCAGGTGTTTCTGTT	1	True	NA	NA	False	NA	NA	NA	56064283	56079832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56078101_56078187_56078363_56078509_56079527
transcript_165253.known	chr7	+	1771	7	FSM	ENSG00000129103.19	ENST00000438133.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	157.042103342455	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	25	True	NA	29	True	AATAAA	-23	NA	56064307	56080669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_165258.known	chr7	+	1287	6	FSM	ENSG00000129103.19	ENST00000395435.7	1287	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	175.431582105389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCATTGCATTGTGGG	-29	True	NA	NA	False	NA	NA	NA	56064253	56080187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56078101_56078187_56078363_56078509_56079527
transcript_165259.known	chr7	+	1683	6	FSM	ENSG00000129103.19	ENST00000436782.5	1683	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	169.505634124651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGACATTTGTGTCTTT	-6	True	NA	25	True	AATAAA	-19	NA	56064276	56080665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_165261.known	chr7	+	1195	3	FSM	ENSG00000129103.19	ENST00000483327.5	1195	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTGATGGTGCCAC	18	True	NA	NA	False	NA	NA	NA	56064300	56073956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996
transcript_165264.known	chr7	-	797	4	FSM	ENSG00000106153.13	ENST00000395422.4	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	1138	junction_1	65.2380257212004	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTTCATTTAGTCTA	13	True	NA	-14	True	AATAAA	-16	NA	56106476	56101572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_56101862_56102866_56103012_56104225_56104476_56106363
transcript_165266.known	chr7	-	694	3	FSM	ENSG00000106153.13	ENST00000473095.1	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	1150	junction_2	66	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTTTGGGAGGCCAAGA	2	True	NA	NA	False	NA	NA	NA	56106431	56102635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_56103012_56104225_56104476_56106363
transcript_165268.known	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	7.11805216802087	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	2	True	NA	0	True	ATTAAA	-20	NA	64563071	64519877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
transcript_165270.nnic	chr7	+	645	3	FSM	ENSG00000286456.2	ENST00000686440.1	636	3	-16	7	-16	-7	multi-exon	FALSE	canonical	3	190	junction_2	22	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACCAAGGCTATGTG	NA	False	NA	11	True	AATAAA	-22	NA	64574656	64614827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64574849_64599658_64599783_64614498
transcript_165271.known	chr7	+	842	5	FSM	ENSG00000197008.10	ENST00000494380.5	842	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	24.7626230436115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTAGAGAGAATTT	-1	True	NA	71	True	CATAAA	-4	NA	64794424	64831803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64830939_64831077_64831450
transcript_165272.known	chr7	+	2230	4	FSM	ENSG00000197008.10	ENST00000440598.2	2230	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	21.249836600679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAATGTGAAAATGAT	2	True	NA	NA	False	ACTAAA	-29	NA	64794427	64833327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64794572_64814917_64815045_64815571_64815654_64831450
transcript_165273.known	chr7	+	2579	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.7550697307953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	2	True	NA	19	True	AATAAA	-33	NA	64794427	64833680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
transcript_165274.known	chr7	+	2679	4	FSM	ENSG00000197008.10	ENST00000359735.7	2679	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	27.3130005674953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGGTTTTGTTTTAGTG	NA	False	NA	20	True	AATAAA	-34	NA	64794387	64833681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64794572_64814917_64815045_64830939_64831077_64831450
transcript_165275.known	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	26.5377090194312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	13	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
transcript_165277.known	chr7	+	2000	4	FSM	ENSG00000198039.12	ENST00000476120.2	3698	4	-26	1724	-6	133	multi-exon	FALSE	canonical	3	47	junction_1	28.0832096931007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	64903246	64929257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64903420_64917580_64917708_64918196_64918293_64927653
transcript_165279.known	chr7	+	752	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	98	83	28	-36	multi-exon	FALSE	canonical	3	4	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGGGTAAATC	67	False	NA	-78	True	NA	NA	NA	64947837	64950641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64947858_64949115_64949410_64950203
transcript_165280.known	chr7	-	1729	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	NA	False	NA	NA	False	AATAAA	-34	NA	65006743	65003668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65005195_65006540
transcript_165281.known	chr7	-	358	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCACCAAGCTATG	0	True	NA	-17	True	ATTAAA	-28	NA	65006659	65006083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65006323_65006540
transcript_165282.known	chr7	-	3206	2	FSM	ENSG00000213462.5	ENST00000394323.3	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTCTCCGGCCTCCTG	2	True	NA	-1	True	AATAAA	-19	NA	65006687	64990355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_64993415_65006540
transcript_165283.known	chr7	+	2238	11	FSM	ENSG00000234585.6	ENST00000426828.5	2238	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.76933979345585	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	-2	True	NA	NA	False	AATAAA	-18	NA	65038359	65074713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65038566_65064998_65065134_65066252_65066427_65066944_65067051_65068455_65068611_65068708_65068791_65069660_65069758_65070345_65070485_65070908_65071043_65073440_65073515_65073777
transcript_165285.known	chr7	+	3165	4	FSM	ENSG00000146757.14	ENST00000328747.12	3165	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	6.94422221866655	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTATTCGATGAAG	1	True	NA	4	True	ATTAAA	-21	NA	65373854	65401136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65374001_65387901_65388029_65388805_65388902_65398340
transcript_165290.known	chr7	+	1170	10	FSM	ENSG00000228409.7	ENST00000688735.1	2135	10	94	871	0	18	multi-exon	FALSE	canonical	3	24	junction_1	24.7720471698981	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	20	False	NA	NA	False	NA	NA	NA	65751141	65763354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_165293.known	chr7	+	5895	3	FSM	ENSG00000196715.7	ENST00000648179.1	5895	3	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTTTCATGGAGCT	-5	True	NA	12	True	AATAAA	-20	NA	65873269	65959562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65873566_65948670_65948781_65954073
transcript_165301.known	chr7	+	1541	2	FSM	ENSG00000196715.7	ENST00000434382.2	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGACATGCTGCCCAGT	18	True	NA	NA	False	NA	NA	NA	65873368	65955417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65873566_65954073
transcript_165307.known	chr7	-	2199	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	91.7428133515258	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	10	True	NA	-12	True	AATAAA	-29	NA	65982213	65960683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_16531.known	chr1	-	1590	12	FSM	ENSG00000143156.14	ENST00000472647.5	1590	12	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_11	106.645082182532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	0	True	NA	NA	False	AATAAA	-18	NA	169367946	169132530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324470_169367707
transcript_165315.known	chr7	-	1983	11	FSM	ENSG00000169919.17	ENST00000447929.5	1983	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	125.013759242733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	0	True	NA	-26	True	AATAAA	-38	NA	65982196	65960697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65980223_65980410_65981973
transcript_165318.nic	chr7	-	2078	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_6	48.5052574470026	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	NA	False	NA	-26	True	AATAAA	-38	NA	65982259	65960697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_16533.known	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_7	38.6030872743028	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-11	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_16537.known	chr1	-	4298	7	FSM	ENSG00000143156.14	ENST00000524967.5	4298	7	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	27.3825775915189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGATATCTTTGCAG	14	True	NA	NA	False	NA	NA	NA	169367772	169283820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_165395.known	chr7	+	2140	17	FSM	ENSG00000126522.17	ENST00000304874.14	2140	17	0	0	0	0	multi-exon	FALSE	canonical	2	124	junction_1	37.1481409359876	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAACTAGCCAAACTG	-9	True	NA	NA	False	ATTAAA	-24	NA	66075818	66093576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_165405.known	chr7	+	1436	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_7	54.1509823446342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	-6	True	NA	8	True	AATAAA	-15	NA	66075821	66092953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_16541.known	chr1	+	2216	6	FSM	ENSG00000143153.14	ENST00000367815.9	2216	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	12.4	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTGTGTGATTCACT	-2	True	NA	13	True	AATAAA	-13	NA	169106689	169132719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169106927_169111369_169111499_169124883_169125040_169127223_169127409_169130009_169130091_169131291
transcript_165413.known	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_13	33.0019528041734	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	-5	True	NA	-13	True	NA	NA	NA	66075888	66092932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_165426.known	chr7	+	1478	15	FSM	ENSG00000126522.17	ENST00000395331.4	1478	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_11	58.5779177589951	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACCTGCCCCCTAATA	14	False	NA	-28	True	NA	NA	NA	66075943	66092917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_165433.known	chr7	+	1974	15	FSM	ENSG00000126522.17	ENST00000380839.9	1974	15	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_6	52.7078974061724	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATGGAAGCGGAG	19	False	NA	-5	True	AATAAA	-11	NA	66075846	66093334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_165438.known	chr7	+	1388	15	FSM	ENSG00000126522.17	ENST00000362000.10	1388	15	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	58.184085067156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTTTCCTGCC	7	True	NA	10	True	AATAAA	-17	NA	66075936	66092955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_165447.known	chr7	+	2172	14	FSM	ENSG00000126522.17	ENST00000672586.1	2172	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	61.0088750940114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAAGTGGGCGCGAG	-2	True	NA	-15	True	NA	NA	NA	66075799	66092930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66075857_66076038_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_165449.known	chr7	+	2441	14	FSM	ENSG00000126522.17	ENST00000672676.1	2441	14	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_11	31.0100193772134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGGGCGCGAGAGGA	18	False	NA	-11	True	NA	NA	NA	66075911	66092934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_16548.known	chr1	+	2300	8	FSM	ENSG00000117475.14	ENST00000329281.6	2300	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	39.8353755204735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGGAAGGAAGA	-4	True	NA	NA	False	NA	NA	NA	169367969	169396540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996_169387210_169395893
transcript_165483.known	chr7	+	2774	6	FSM	ENSG00000241258.7	ENST00000395326.8	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	4.19523539268061	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	7	True	NA	18	True	AATAAA	-24	NA	66114846	66154568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207
transcript_16549.known	chr1	+	2524	7	FSM	ENSG00000117475.14	ENST00000367808.8	2524	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	20.3278681179858	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	-22	True	NA	25	True	AATAAA	-18	NA	169368194	169388305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_165493.known	chr7	+	1393	5	FSM	ENSG00000241258.7	ENST00000338592.5	1393	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	27.5816968296006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGGTGATGGCAC	10	True	NA	NA	False	AATACA	-4	NA	66114849	66153289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66114971_66127703_66127741_66134279_66134375_66145442_66145501_66152207
transcript_165497.known	chr7	+	492	3	FSM	ENSG00000241258.7	ENST00000398684.6	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	35	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTTGGGGAGA	1	True	NA	NA	False	AAAAAG	-3	NA	66114840	66152511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66114971_66145442_66145501_66152207
transcript_165498.nic	chr7	+	1501	2	ISM	ENSG00000126522.17	ENST00000487982.5	1007	8	-72	9716	-38	-5899	5prime_fragment	FALSE	canonical	3	124	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAGGCATGGTGGCTC	NA	False	NA	NA	False	AATAAA	-11	NA	66075761	66077444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_66075857_66076038
transcript_165499.nnic	chr7	+	3105	6	NNC	ENSG00000169902.15	novel	1981	6	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	41.6970022903326	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGTAGTTACATGT	NA	False	NA	15	True	AATAAA	-16	NA	66205302	66360440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66358798
transcript_165500.nnic	chr7	+	2850	6	NNC	ENSG00000169902.15	novel	1981	6	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	48.6168695002054	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGTAGTTACATGT	NA	False	NA	15	True	AATAAA	-16	NA	66205302	66360440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66359053
transcript_165501.known	chr7	+	1981	6	FSM	ENSG00000169902.15	ENST00000304842.6	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	25.0966133173383	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTAGTTACATGTTTT	-1	True	NA	18	True	AATAAA	-19	NA	66205333	66360443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66359894
transcript_165510.known	chr7	+	924	5	FSM	ENSG00000169902.15	ENST00000480281.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	55.9704162928953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCTTGACCCCTGGACA	-1	True	NA	NA	False	NA	NA	NA	66205333	66359473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66205523_66286510_66286710_66352504_66352556_66356824_66356872_66359035
transcript_165515.known	chr7	+	540	2	FSM	ENSG00000237310.3	ENST00000445681.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGGTTTTTGGGGTT	NA	False	NA	24	True	ATTAAA	-25	NA	66493705	66495474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66494026_66495254
transcript_165516.known	chr7	+	454	2	FSM	ENSG00000237310.3	ENST00000452565.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTCTGGTTTTTGGGG	58	False	NA	22	True	ATTAAA	-23	NA	66493785	66495472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66494022_66495254
transcript_165532.nic	chr7	-	2130	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-54	22786	-20	175	5prime_fragment	FALSE	canonical	3	38	junction_4	11.2583302491977	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	NA	False	NA	NA	False	ATTAAA	-40	NA	66592417	66553309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_165535.nic	chr7	-	1871	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-54	23045	-20	-84	5prime_fragment	FALSE	canonical	3	38	junction_4	11.2583302491977	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	NA	False	NA	-4	True	TATAAA	-22	NA	66592417	66553568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_165538.nic	chr7	-	1672	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-54	23244	-20	-283	5prime_fragment	FALSE	canonical	3	38	junction_4	11.2583302491977	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAAAATTCTTGGTA	NA	False	NA	-12	True	AATAAA	-15	NA	66592417	66553767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_16554.known	chr1	-	1860	6	FSM	ENSG00000117477.13	ENST00000367806.8	1917	6	57	0	45	0	multi-exon	TRUE	canonical	0	0	junction_5	24.5324275195098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-2	True	NA	0	True	AATAAA	-23	NA	169427417	169394869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424951_169427287
transcript_165541.nic	chr7	-	1932	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-64	23003	0	175	5prime_fragment	FALSE	canonical	3	58	junction_2	41.2148840428633	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	-8	True	NA	NA	False	ATTAAA	-40	NA	66592397	66553309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_165542.nic	chr7	-	2033	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-74	8459	-20	175	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	NA	False	NA	NA	False	ATTAAA	-40	NA	66592417	66553309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_165546.nic	chr7	-	1693	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-84	23262	-20	-84	5prime_fragment	FALSE	canonical	3	58	junction_2	41.2148840428633	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	NA	False	NA	-4	True	TATAAA	-22	NA	66592417	66553568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_165547.nic	chr7	-	1774	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-74	8718	-20	-84	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	NA	False	NA	-4	True	TATAAA	-22	NA	66592417	66553568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_165549.nic	chr7	-	1862	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-452	23461	-388	-283	5prime_fragment	FALSE	canonical	3	58	junction_2	41.2148840428633	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAAAATTCTTGGTA	NA	False	NA	-12	True	AATAAA	-15	NA	66592785	66553767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_165550.nic	chr7	-	1575	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-74	8917	-20	-283	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAAAATTCTTGGTA	NA	False	NA	-12	True	AATAAA	-15	NA	66592417	66553767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_165552.nic	chr7	-	1838	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-3	7887	-3	175	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	-11	True	NA	NA	False	ATTAAA	-40	NA	66592400	66553309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_165554.nic	chr7	-	1593	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-17	8146	-17	-84	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	NA	False	NA	-4	True	TATAAA	-22	NA	66592414	66553568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_165555.nic	chr7	-	1674	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-297	8345	-297	-283	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAAAATTCTTGGTA	NA	False	NA	-12	True	AATAAA	-15	NA	66592694	66553767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_165558.known	chr7	+	4118	5	FSM	ENSG00000243335.10	ENST00000640385.1	4118	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	20.017180121086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAGAACTAGAACCTGG	6	True	NA	4	True	NA	NA	NA	66628884	66643032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66629209_66633274_66633445_66638252_66638432_66638855_66639229_66639960
transcript_165560.known	chr7	+	4795	4	FSM	ENSG00000243335.10	ENST00000275532.8	4795	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	23.0988215187606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAAGGGCATTAAAGTCA	6	True	NA	-11	True	NA	NA	NA	66628884	66643017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66629209_66633274_66633445_66638252_66638392_66638855
transcript_165562.known	chr7	+	4869	4	FSM	ENSG00000243335.10	ENST00000639828.2	4869	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	8.48528137423857	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTGCTGTGCCTTTCT	2	True	NA	19	True	ATTAAA	-15	NA	66628880	66643047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66629209_66633274_66633445_66638252_66638432_66638855
transcript_165574.known	chr7	+	2281	10	FSM	ENSG00000154710.18	ENST00000450873.6	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	62.3451167313601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAGCACCATTTTATT	0	True	NA	9	True	AATGAA	-16	NA	66740732	66809817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66740793_66768830_66769026_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_165581.known	chr7	+	3733	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	22.1468818346963	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	0	True	NA	17	True	AATAAA	-29	NA	66740732	66811464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_16559.known	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-8	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169422314_169424810_169424931_169427287
transcript_16560.nic	chr1	-	1272	3	ISM	ENSG00000117477.13	ENST00000491570.2	1652	4	6	2577	-6	0	5prime_fragment	FALSE	canonical	0	0	junction_2	27.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-14	True	NA	NA	False	AAGAAA	-24	NA	169427468	169421362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_169422314_169424810_169424951_169427287
transcript_16561.known	chr1	-	3612	6	FSM	ENSG00000117479.15	ENST00000236137.10	3612	6	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_4	23.1982757979984	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAAATTTATCTTCT	17	True	NA	4	True	AATAAA	-35	NA	169485944	169463908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
transcript_165613.nic	chr7	+	1977	8	NIC	ENSG00000106609.16	novel	4229	7	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	203.661784458891	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTTAGGACAGACTTG	NA	False	NA	14	True	AATAAA	-21	NA	66921176	66956153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_66921462_66922148_66922247_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
transcript_165614.nnic	chr7	+	2015	8	NNC	ENSG00000106609.16	novel	4229	7	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	205.465325541805	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTTAGGACAGACTTG	NA	False	NA	14	True	AATAAA	-21	NA	66921176	66956153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_66921462_66927641_66927778_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
transcript_165616.known	chr7	+	4229	7	FSM	ENSG00000106609.16	ENST00000341567.8	4229	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_6	17.1407571465077	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCGCGTCTTCTTCC	-15	True	NA	19	True	AATAAA	-14	NA	66921224	66958551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
transcript_16562.known	chr1	-	3371	6	FSM	ENSG00000117479.15	ENST00000646596.1	3371	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.2227945622275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGCAAGTTGTACTGTA	20	True	NA	-135	True	NA	NA	NA	169485941	169464047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468738_169469963_169470187_169477154_169477758_169485562
transcript_165620.known	chr7	+	1610	6	FSM	ENSG00000106609.16	ENST00000433271.6	1610	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	188.305496467841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTTAGGACAGACTTG	22	True	NA	14	True	AATAAA	-21	NA	66921261	66956153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66953225_66953370_66955501
transcript_165626.known	chr7	+	3330	16	FSM	ENSG00000198874.14	ENST00000359626.10	3330	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	20.5875906528396	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCATGAGTTTTTTA	-3	True	NA	13	True	AATAAA	-18	NA	66996832	67239514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67055834_67055888_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_165629.known	chr7	+	3255	15	FSM	ENSG00000198874.14	ENST00000361660.8	3255	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	36.4020211369801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCAGCATGAGTTTTT	17	True	NA	11	True	AATAAA	-16	NA	66996852	67239512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_165631.nic	chr7	+	1166	7	ISM	ENSG00000198874.14	ENST00000359626.10	3330	16	-37	214493	-24	7140	5prime_fragment	FALSE	canonical	3	106	junction_3	14.2594997574716	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCGTTACTTTGGGAAA	1391	False	NA	NA	False	AAGAAA	-6	NA	66996795	67025021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899
transcript_165633.known	chr7	-	1613	5	FSM	ENSG00000126524.11	ENST00000246868.7	1613	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	15.1719313206988	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTCCTAACTCCCTTTC	11	True	NA	91	True	AATAAA	-42	NA	66995586	66987679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
transcript_165634.known	chr7	-	1531	5	FSM	ENSG00000126524.11	ENST00000414306.5	1531	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	118.165932061656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGTATGTAATCAAT	21	True	NA	27	True	AATATA	-13	NA	66995576	66987743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994219_66994342_66995289
transcript_165636.nic	chr7	-	2373	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	5	-1746	0	1746	multi-exon	FALSE	canonical	3	26	junction_4	3.11247489949718	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATGCTTTTCTGCATT	NA	False	NA	NA	False	AAAAAG	-10	NA	67302469	67290681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_16564.known	chr1	-	2976	5	FSM	ENSG00000117479.15	ENST00000367804.4	2976	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	71.061153241416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTCTTTTTAATCAAAA	30	False	NA	-16	True	AATAAA	-15	NA	169485931	169463928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169485562
transcript_165641.known	chr7	+	2143	5	FSM	ENSG00000106610.16	ENST00000416602.6	2143	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	21.4592637338749	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAAACTTATCTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	67302620	67321526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_67302886_67305986_67306084_67308934_67309140_67309563_67309716_67320102
transcript_165649.known	chr7	+	3909	11	FSM	ENSG00000185274.12	ENST00000333538.10	3909	11	0	0	0	0	multi-exon	TRUE	canonical	3	266	junction_10	16.2360709532818	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTCCTTTGTGTCT	3	True	NA	20	True	AATAAA	-20	NA	71132143	71713599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_71133041_71335549_71335734_71388234_71388402_71415888_71416064_71420907_71421106_71571284_71571403_71665410_71665597_71669971_71670110_71677210_71677307_71710760_71710929_71712017
transcript_165662.known	chr7	+	3012	10	FSM	ENSG00000185274.12	ENST00000618959.1	3012	10	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_9	16.2480768092719	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCAGCCTCCTTTGTGTC	NA	False	NA	19	True	AATAAA	-19	NA	71335548	71713598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_71335734_71388234_71388402_71415888_71416064_71420907_71421106_71571284_71571403_71665410_71665597_71669971_71670110_71677210_71677307_71710760_71710929_71712017
transcript_165665.known	chr7	-	3117	14	FSM	ENSG00000277149.5	ENST00000620995.5	3117	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	37.4717250405528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-15	True	NA	-8	True	AATAAA	-18	NA	72828200	72574512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72744483_72744602_72777415_72777534_72802399_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_165672.nnic	chr7	-	2053	7	NNC	ENSG00000277149.5	novel	3117	14	NA	NA	92087	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_3	14.613540144522	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-1	True	NA	-8	True	AATAAA	-18	NA	72736087	72574512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72735944
transcript_165674.nic	chr7	-	998	6	ISM	ENSG00000277149.5	ENST00000620995.5	3117	14	-28	227888	-28	-73557	5prime_fragment	FALSE	canonical	3	8	junction_2	6.24819974072532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCATTACTTTGGGAAA	NA	False	NA	NA	False	AAGAAA	-6	NA	72828228	72802400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_165675.nic	chr7	+	1520	4	FSM	ENSG00000225648.6	ENST00000685034.1	1489	4	-34	3	1	0	multi-exon	FALSE	canonical	3	46	junction_1	24.3903441732356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	72829425	72837376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72829784_72831601_72831799_72833763_72833929_72836576
transcript_165676.known	chr7	+	733	3	FSM	ENSG00000225648.6	ENST00000415772.5	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTGTAAACAGTCAGA	17	True	NA	NA	False	AATAAA	-17	NA	72829489	72834005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72829784_72831601_72831799_72833763
transcript_16568.nic	chr1	+	3226	24	NIC	ENSG00000000460.17	novel	4011	25	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	47.8065968191932	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAGTGAAAATAATCT	NA	False	NA	9	True	TATAAA	-18	NA	169794710	169853085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_165689.known	chr7	+	5842	13	FSM	ENSG00000196313.13	ENST00000434423.5	5842	13	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	49.768561584822	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-9	True	NA	NA	False	AATAAA	-19	NA	72925094	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72925766_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
transcript_165691.known	chr7	-	1647	12	FSM	ENSG00000106133.18	ENST00000485741.6	1647	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	172.318607466921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	10	False	NA	-8	True	AATAAA	-18	NA	72954720	72948297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_165699.nnic	chr7	-	2488	11	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	62	junction_1	164.482096290143	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954800	72948297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_165702.known	chr7	-	1789	11	FSM	ENSG00000106133.18	ENST00000388955.8	1789	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	170.414905451372	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954790	72948297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_165714.nnic	chr7	-	2556	10	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	66	junction_3	163.548158045268	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-10	True	AATAAA	-16	NA	72954800	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_16573.known	chr1	+	782	6	FSM	ENSG00000000460.17	ENST00000496973.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	103.946909525969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTTAAATCTTACCAAA	-18	True	NA	NA	False	ATTAAA	-2	NA	169795042	169804347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804111
transcript_165733.nnic	chr7	-	2636	9	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	71	junction_5	160.112265301569	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-10	True	AATAAA	-16	NA	72954800	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_16575.known	chr1	-	1462	2	FSM	ENSG00000171806.12	ENST00000310392.5	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	3	True	NA	-4	True	AATAAA	-16	NA	169794907	169792528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169793898_169794814
transcript_165755.known	chr7	-	1180	7	FSM	ENSG00000106133.18	ENST00000444583.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	182.059514078959	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	17	False	NA	-3	True	AATAAA	-23	NA	72954713	72948292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_165758.nnic	chr7	-	1305	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	23	-2	intron_retention	FALSE	canonical	3	66	junction_3	172.328900652212	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-10	True	AATAAA	-16	NA	72954767	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_16576.known	chr1	-	850	2	FSM	ENSG00000171806.12	ENST00000454472.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGGGAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	169794963	169793141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169793898_169794869
transcript_165774.nnic	chr7	-	1385	6	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	23	-2	intron_retention	FALSE	canonical	3	148	junction_2	155.494565821446	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-10	True	AATAAA	-16	NA	72954767	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954624
transcript_165775.nic	chr7	-	1297	6	NIC	ENSG00000106133.18	novel	1385	10	NA	NA	23	-2	intron_retention	FALSE	canonical	3	89	junction_2	170.259331609166	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-10	True	AATAAA	-16	NA	72954767	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_165778.nnic	chr7	-	1661	6	NIC	ENSG00000106133.18	novel	1385	10	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	40	junction_4	171.382146094627	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-10	True	AATAAA	-16	NA	72954800	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
transcript_165781.known	chr7	-	1776	5	FSM	ENSG00000106133.18	ENST00000602348.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	214.390414897681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATTTAGA	24	False	NA	NA	False	AATAAA	-25	NA	72954706	72947580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72948809_72948891_72949103_72949845_72949962_72950057_72950197_72954624
transcript_165782.nic	chr7	-	1507	5	NIC	ENSG00000106133.18	novel	1385	10	NA	NA	23	-2	intron_retention	FALSE	canonical	3	171	junction_4	141.68869926709	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-10	True	AATAAA	-16	NA	72954767	72948299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72954624
transcript_16579.known	chr1	-	6308	13	FSM	ENSG00000000457.14	ENST00000367771.11	6308	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	8.18874566435883	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGATAAATCAGTTTTAT	25	True	NA	NA	False	ATTAAA	-16	NA	169893896	169849630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_165805.nic	chr7	-	1878	9	NIC	ENSG00000174353.17	novel	1067	8	NA	NA	-20	-407	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	31.9687347262916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAGCCCCATTGTCC	-1	True	NA	-28	True	AGTAAA	-18	NA	73005942	72997465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_165810.known	chr7	-	2137	8	FSM	ENSG00000174353.17	ENST00000428423.5	2137	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	29.1204395571221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAATTAGGCCGGGCG	23	False	NA	NA	False	NA	NA	NA	73005918	72997058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_165811.known	chr7	-	1262	8	FSM	ENSG00000174353.17	ENST00000423834.6	1262	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	36.3295573148625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	19	False	NA	NA	False	NA	NA	NA	73005922	72998489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005575
transcript_165812.nic	chr7	-	1165	8	NIC	ENSG00000174353.17	novel	1262	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	28.5478474116129	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-1	True	NA	NA	False	NA	NA	NA	73005942	72998489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_165816.known	chr7	+	1336	7	FSM	ENSG00000229018.5	ENST00000506558.2	1336	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	10.1885011437186	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73005540	73021103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73006175_73009443_73009584_73011468_73011556_73011731_73011835_73013091_73013278_73016328_73016418_73021006
transcript_165821.nic	chr7	-	1041	7	ISM	ENSG00000174353.17	ENST00000428423.5	2137	8	-24	1431	-20	0	5prime_fragment	FALSE	canonical	3	61	junction_4	21.0508643264092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-1	True	NA	NA	False	NA	NA	NA	73005942	72998489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_165828.known	chr7	-	1716	6	FSM	ENSG00000174353.17	ENST00000448173.5	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	33.1746891469988	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	26	False	NA	NA	False	NA	NA	NA	73005915	72998483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_16583.known	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_6	9.10298115608166	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-45	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
transcript_165831.nic	chr7	-	1619	5	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-20	0	intron_retention	FALSE	canonical	3	61	junction_2	23.847169643377	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-1	True	NA	NA	False	NA	NA	NA	73005942	72998483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_165836.nic	chr7	-	1829	4	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-20	0	intron_retention	FALSE	canonical	3	61	junction_1	24.3629956194955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-1	True	NA	NA	False	NA	NA	NA	73005942	72998483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72999860_73003020_73003138_73003644_73003731_73005692
transcript_165838.known	chr7	+	3609	24	FSM	ENSG00000233369.7	ENST00000544802.5	3609	24	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_21	565.57864375207	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	-2	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
transcript_165839.known	chr7	+	1516	8	FSM	ENSG00000182487.12	ENST00000423083.1	1516	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.96346148968797	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGCTCTGCAGGAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	73220638	73235945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73220718_73223877_73223957_73227408_73227465_73229566_73230261_73231810_73231891_73234613_73234719_73235188_73235335_73235668
transcript_16584.known	chr1	+	2467	7	FSM	ENSG00000120370.14	ENST00000498166.6	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	32.9380732081685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGAATATCACATTAT	-12	True	NA	21	True	AATAAA	-21	NA	170532150	170553446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_170532285_170533463_170533652_170536309_170536422_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_165847.known	chr7	-	1602	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	160.206887846872	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTACGATAGATCACAGT	-3	True	NA	-17	True	AATAAA	-12	NA	73308816	73303234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_165854.known	chr7	-	2286	9	FSM	ENSG00000130305.17	ENST00000471461.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	182.388321994584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-3	True	NA	-7	True	AATAAA	-22	NA	73308816	73303224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304405_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73308554_73308697
transcript_165859.known	chr7	-	1672	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_7	52.9691832578151	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	7	True	NA	-12	True	AATAAA	-17	NA	73308806	73303229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_16586.known	chr1	+	2540	5	FSM	ENSG00000120370.14	ENST00000367763.8	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	17.2536228079786	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATAGTGTCTTTCATTTA	3	True	NA	NA	False	AATAAA	-14	NA	170532165	170553834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_170532285_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_165875.known	chr7	+	2343	1	FSM	ENSG00000188763.5	ENST00000344575.5	2343	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGAGTCCTCTCTGGCT	-4	True	NA	14	True	AATAAA	-14	NA	73433777	73436120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73433800_73436100
transcript_165876.known	chr7	-	6115	20	FSM	ENSG00000009954.11	ENST00000339594.9	6115	20	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_18	4.75027335559845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTCTGGTGGCTGTTTGT	0	True	NA	-11	True	AATAAA	-31	NA	73522293	73440405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73441694_73442180_73442554_73442724_73442829_73443983_73444130_73447263_73447380_73449541_73449690_73450846_73450995_73459535_73459719_73462921_73463100_73465438_73465538_73466295_73466402_73469516_73469651_73470344_73470484_73476867_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_165880.nic	chr7	-	2851	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-36	35426	-21	-14527	5prime_fragment	FALSE	canonical	3	18	junction_5	3.29983164553722	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAAGTTTGAGCCCCAA	NA	False	NA	22	True	AAAAAG	-4	NA	73522314	73476990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_165881.nic	chr7	-	2782	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-36	35495	-21	-14596	5prime_fragment	FALSE	canonical	3	18	junction_5	3.29983164553722	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCCAAAAATAAAGAA	NA	False	NA	-47	True	AAGAAA	-40	NA	73522314	73477059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_165883.nic	chr7	-	2064	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-36	36213	-21	-15314	5prime_fragment	FALSE	canonical	3	18	junction_5	3.29983164553722	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAAGAACGAAGAGAGAA	NA	False	NA	45	True	AAAAAG	-37	NA	73522314	73477777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_165884.nic	chr7	-	2013	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-36	36264	-21	-15365	5prime_fragment	FALSE	canonical	3	18	junction_5	3.29983164553722	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATTTGAAAAAGAAACG	NA	False	NA	-6	True	AAAAAG	-34	NA	73522314	73477828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_165887.known	chr7	-	985	7	FSM	ENSG00000106635.8	ENST00000455335.2	985	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	141.249975417894	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATCTTCCTGACCCTG	-11	True	NA	NA	False	GGGGCT	-4	NA	73557676	73537141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73553547_73553670_73557486
transcript_165889.known	chr7	-	1638	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	119.643804687079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAATTAAACT	752	False	NA	-41	True	NA	NA	NA	73557251	73536387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
transcript_165890.known	chr7	-	1663	6	FSM	ENSG00000106635.8	ENST00000223368.7	1663	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	31.4922212617656	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	-25	True	NA	-9	True	ATTAAA	-15	NA	73557690	73536355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557486
transcript_165894.known	chr7	-	653	5	FSM	ENSG00000106635.8	ENST00000464288.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	156.787276269473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTTATTGCATTCTGG	-8	True	NA	NA	False	NA	NA	NA	73557241	73537265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557040
transcript_165895.known	chr7	-	887	5	FSM	ENSG00000106635.8	ENST00000454871.5	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	127.332978838948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGCACCTTCTAGA	56	True	NA	NA	False	NA	NA	NA	73557609	73536953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557486
transcript_165896.known	chr7	-	1458	5	FSM	ENSG00000106635.8	ENST00000411832.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	131.774428475331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTGAAATATGTCCTG	-6	True	NA	-24	True	AATAGA	-17	NA	73557671	73536370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73543547_73543645_73552166_73552243_73557486
transcript_16590.known	chr1	+	2303	10	FSM	ENSG00000076258.10	ENST00000367749.4	2303	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_7	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTCCCCACCCAAATC	1	True	NA	7	True	AATAAA	-19	NA	171314182	171342084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708_171332909_171334410_171334764_171337355_171337426_171341412
transcript_165902.known	chr7	-	1196	8	FSM	ENSG00000106638.18	ENST00000426966.5	1196	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	80.8523471571254	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGCCGCTTTGAAGAGG	-11	True	NA	NA	False	AATACA	-29	NA	73578619	73570885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73576540_73576702_73578419
transcript_165913.known	chr7	-	2358	7	FSM	ENSG00000106638.18	ENST00000459913.5	2358	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	67.5296231294089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	438	False	NA	-52	True	AATAAA	-28	NA	73578269	73569659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73577972
transcript_165914.known	chr7	-	4344	7	FSM	ENSG00000106638.18	ENST00000305632.11	4344	7	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_2	16.7199149386459	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTATAGCCTATTT	29	True	NA	NA	False	TTTAAA	-1	NA	73578579	73567536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_165916.known	chr7	-	2209	7	FSM	ENSG00000106638.18	ENST00000450285.5	2209	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	65.3624509944356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	18	True	NA	-52	True	AATAAA	-28	NA	73578590	73569659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573960_73574123_73574382_73574514_73578419
transcript_165917.nic	chr7	-	2955	7	NIC	ENSG00000106638.18	novel	1196	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	68.3067021276504	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	-11	True	NA	-52	True	AATAAA	-28	NA	73578619	73569659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73570973_73571188_73572036_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_165923.nic	chr7	-	3328	5	NIC	ENSG00000106638.18	novel	2276	7	NA	NA	7	0	intron_retention	FALSE	canonical	2	8	junction_4	71.3560614103665	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	38	False	73578707	-52	True	AATAAA	-28	NA	73578669	73569659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73574805_73578419
transcript_165929.known	chr7	-	3252	17	FSM	ENSG00000009950.16	ENST00000313375.8	3252	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	13.0240162776311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTGTTGGTGTGCT	-2	True	NA	-18	True	AATAAA	-14	NA	73624522	73593201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73593984_73594273_73594404_73595636_73595761_73595841_73595970_73596152_73596273_73596363_73596480_73596638_73596790_73596864_73596933_73597181_73597714_73599525_73599696_73605687_73605769_73605909_73606112_73606973_73607019_73607330_73607421_73607589_73607673_73616070_73616178_73624199
transcript_16593.known	chr1	+	1931	12	FSM	ENSG00000117523.18	ENST00000476522.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	12.7849343156133	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	-2	True	NA	-31	True	AAAAAG	-9	NA	171485550	171532792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_165939.nic	chr7	-	1753	3	NIC	ENSG00000009950.16	novel	3252	17	NA	NA	-25	-486	intron_retention	FALSE	canonical	3	39	junction_1	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGGGACCAAAGAACTG	-1	True	NA	NA	False	AAAAAG	-33	NA	73624568	73606395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73607673_73616070_73616178_73624199
transcript_165940.known	chr7	+	1618	4	FSM	ENSG00000176428.6	ENST00000324941.5	1618	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	6.18241233033047	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCTGCCCGACTCCTCT	-1	True	NA	26	True	AATAAA	-18	NA	73667830	73672110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73668097_73669418_73669591_73670019_73670103_73671013
transcript_165950.nic	chr7	-	2247	10	NIC	ENSG00000106089.12	novel	2102	10	NA	NA	-51	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_9	9.82940913537621	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCTCTGTTGTAGATT	6786	False	NA	-7	True	AATAAA	-15	NA	73719723	73699209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73700485_73700729_73700932_73702844_73702983_73703754_73703829_73704147_73704257_73704349_73704424_73705149_73705225_73708588_73708689_73709044_73709123_73719601
transcript_165955.nic	chr7	-	4160	9	NIC	ENSG00000106089.12	novel	2102	10	NA	NA	-51	0	intron_retention	FALSE	canonical	3	22	junction_8	9.53857300648268	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCTCTGTTGTAGATT	6786	False	NA	-7	True	AATAAA	-15	NA	73719723	73699209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73700485_73700729_73702983_73703754_73703829_73704147_73704257_73704349_73704424_73705149_73705225_73708588_73708689_73709044_73709123_73719601
transcript_165958.known	chr7	-	2536	1	FSM	ENSG00000176410.8	ENST00000395176.3	2536	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGGAAACCA	-18	True	NA	NA	False	NA	NA	NA	73683453	73680917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73680900_73683500
transcript_165959.known	chr7	+	1201	12	FSM	ENSG00000071462.12	ENST00000265758.7	1201	12	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_10	69.2246313589091	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	4	True	NA	6	True	AATAAA	-16	NA	73683596	73698212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_165960.known	chr7	+	1219	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	316.623714192239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	33	False	NA	2	True	AATAAA	-12	NA	73683625	73698208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
transcript_165961.known	chr7	+	1260	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	250.54515767234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	33	False	NA	NA	False	NA	NA	NA	73683625	73698104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_16597.nic	chr1	+	1395	10	ISM	ENSG00000117523.18	ENST00000647382.2	10624	35	-27	68641	-27	0	5prime_fragment	FALSE	canonical	3	30	junction_4	7.28943087415854	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGAAGTTTCCAACACT	-7	True	NA	NA	False	AAAAAG	-4	NA	171485502	171524870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820
transcript_165976.known	chr7	-	1447	6	FSM	ENSG00000106077.19	ENST00000437775.7	1447	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	132.32989080325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	1	True	NA	-11	True	AATAAA	-16	NA	73738852	73736093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738443_73738645
transcript_165977.known	chr7	-	1463	6	FSM	ENSG00000106077.19	ENST00000357419.9	1463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	122.463708910028	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	1	True	NA	-11	True	AATAAA	-16	NA	73738852	73736093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738332_73738464_73738645
transcript_165988.known	chr7	-	1562	5	FSM	ENSG00000106077.19	ENST00000497897.5	1562	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	134.127737623506	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-1	True	NA	-11	True	AATAAA	-16	NA	73738781	73736093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737736_73738332_73738464_73738645
transcript_165990.known	chr7	-	1277	5	FSM	ENSG00000106077.19	ENST00000395147.9	1277	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	131.913797610409	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	7	True	NA	-11	True	AATAAA	-16	NA	73738832	73736093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737561_73737736_73738327_73738464_73738645
transcript_165991.known	chr7	-	852	5	FSM	ENSG00000106077.19	ENST00000412965.5	852	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	149.818848947654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGTGGTGGCTCATGCCT	114	False	NA	NA	False	NA	NA	NA	73738739	73736535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737221_73737561_73737736_73738327_73738464_73738645
transcript_166008.known	chr7	+	662	4	FSM	ENSG00000225969.2	ENST00000427153.2	662	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGCCTGTCTGAGTC	NA	False	NA	NA	False	ATTAAA	-38	NA	73735037	73736158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73735091_73735240_73735500_73735727_73735849_73735929
transcript_166009.nic	chr7	-	1786	4	NIC	ENSG00000106077.19	novel	1277	5	NA	NA	-38	0	intron_retention	FALSE	canonical	3	289	junction_1	44.5296405654581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	NA	False	NA	-11	True	AATAAA	-16	NA	73738890	73736093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73736692_73736928_73737736_73738327_73738464_73738645
transcript_166013.known	chr7	-	890	4	FSM	ENSG00000106077.19	ENST00000458339.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	163.882749414194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTAGGCAACAGAGCA	30	False	NA	NA	False	NA	NA	NA	73738823	73736289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73737561_73737736_73738327_73738464_73738645
transcript_16602.known	chr1	+	717	5	FSM	ENSG00000117523.18	ENST00000467601.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	12.852528934027	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTACTTTCTCTTTA	43	False	NA	NA	False	NA	NA	NA	171485595	171515859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171485736_171512031_171512201_171513000_171513173_171514535_171514646_171515733
transcript_166022.nic	chr7	-	2015	3	NIC	ENSG00000106077.19	novel	1277	5	NA	NA	-30	0	intron_retention	FALSE	canonical	3	340	junction_2	29	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	NA	False	NA	-11	True	AATAAA	-16	NA	73738882	73736093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73737736_73738327_73738464_73738645
transcript_166023.known	chr7	-	746	3	FSM	ENSG00000106077.19	ENST00000480445.5	746	3	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_1	160.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCCAGGACCTGCAGGA	1	True	NA	NA	False	NA	NA	NA	73738852	73737669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73738073_73738327_73738464_73738645
transcript_166024.nic	chr7	-	1842	3	NIC	ENSG00000106077.19	novel	890	4	NA	NA	-2	51	intron_retention	FALSE	canonical	3	340	junction_2	29	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGCACAAAACCCCAGGC	-1	True	NA	NA	False	AAAACA	-10	NA	73738854	73736238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73737736_73738327_73738464_73738645
transcript_166025.known	chr7	-	1274	1	FSM	ENSG00000165215.6	ENST00000395145.3	1274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	477	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGGAGCCTCCTTGTT	-1	True	NA	-5	True	AATAAA	-17	NA	73770270	73768996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73769000_73770300
transcript_166026.known	chr7	+	1695	1	FSM	ENSG00000189143.10	ENST00000340958.4	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCTCTGATTTCA	-2	True	NA	13	True	AATAAA	-24	NA	73830995	73832690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73831000_73832700
transcript_166027.known	chr7	+	4108	2	FSM	ENSG00000189143.10	ENST00000431918.1	4108	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAATTTTATTGTCTCT	-8	True	NA	6	True	AATAAA	-17	NA	73828173	73832683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73828198_73828599
transcript_166029.nnic	chr7	-	1886	7	NNC	ENSG00000165171.11	novel	922	6	NA	NA	-19	1911	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.105278466667	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTCCCATTTATTGTA	-11	True	NA	-9	True	AATAAA	-14	NA	73842535	73832678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_73833104_73834069_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
transcript_166031.known	chr7	-	922	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	10.36532681588	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	8	True	NA	-5	True	ATTAAA	-16	NA	73842516	73834589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
transcript_166038.nnic	chr7	-	1422	5	NIC	ENSG00000165171.11	novel	922	6	NA	NA	-19	608	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	20.3592730715023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAATGATGGAGAAGAC	-11	True	NA	NA	False	AAAAAG	-19	NA	73842535	73833981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842489
transcript_16604.nic	chr1	+	580	3	ISM	ENSG00000117523.18	ENST00000476522.5	1931	12	-48	19620	-27	-2624	5prime_fragment	FALSE	canonical	3	44	junction_2	0.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAAAGTCTGTTAAA	-7	True	NA	NA	False	AAGAAA	-2	NA	171485502	171513172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_171485736_171512031_171512201_171512994
transcript_166047.known	chr7	+	2583	32	FSM	ENSG00000049540.19	ENST00000445912.5	2583	32	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	5.94809319825348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTGTAACCCCATC	-2	True	NA	NA	False	NA	NA	NA	74027788	74068763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74057639_74057697_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
transcript_166048.known	chr7	+	3109	32	FSM	ENSG00000049540.19	ENST00000380576.9	3109	32	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_30	5.95246518943417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGGGATTATTTTTGA	-1	True	NA	10	True	AATAAA	-22	NA	74028174	74069678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74065943_74065998_74066731_74066777_74068656
transcript_166050.nic	chr7	+	3112	31	NIC	ENSG00000049540.19	novel	3109	32	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	5.081666393353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGGGATTATTTTTGA	13	False	NA	10	True	AATAAA	-22	NA	74028117	74069678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
transcript_166058.known	chr7	+	3043	30	FSM	ENSG00000049540.19	ENST00000380575.8	3043	30	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.61698629847794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGGGATTATTTTTGA	20	False	NA	10	True	AATAAA	-22	NA	74028156	74069678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74028270_74035363_74035415_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
transcript_166063.known	chr7	+	3361	32	FSM	ENSG00000049540.19	ENST00000357036.9	3361	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.82545886059306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTTAGCTTCCTTCG	-6	True	NA	NA	False	AATAAA	-21	NA	74028169	74069907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043102_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74057639_74057697_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
transcript_166064.nnic	chr7	+	3324	17	NNC	ENSG00000106683.15	novel	3355	16	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.3007620604069	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGCGTGGCGATGTGT	NA	False	NA	17	True	AATAAA	-24	NA	74083764	74122525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_74083868_74083937_74084046_74085747_74085845_74096621_74096761_74097079_74097190_74099031_74099239_74105874_74105981_74106076_74106244_74107009_74107194_74107870_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
transcript_166066.nnic	chr7	+	3306	17	NNC	ENSG00000106683.15	novel	3355	16	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.3007620604069	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGCGTGGCGATGTGT	-27	True	NA	17	True	AATAAA	-24	NA	74083790	74122525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_74083893_74083954_74084046_74085747_74085845_74096621_74096761_74097079_74097190_74099031_74099239_74105874_74105981_74106076_74106244_74107009_74107194_74107870_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
transcript_16607.known	chr1	+	1919	12	NNC	ENSG00000117523.18	novel	1931	12	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.7326332221623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAAGAACTA	-2	True	NA	24	True	AAGAAA	-7	NA	171485550	171532775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517585_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_166074.known	chr7	+	3355	16	FSM	ENSG00000106683.15	ENST00000336180.7	3355	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_15	7.61110300080671	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGCGTGGCGATGTGT	-14	True	NA	17	True	AATAAA	-24	NA	74083803	74122525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74084046_74085747_74085845_74096621_74096761_74097079_74097190_74099031_74099239_74105874_74105981_74106076_74106244_74107009_74107194_74107870_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
transcript_166079.known	chr7	+	2563	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_4	1327.37946722104	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	7	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
transcript_166084.known	chr7	+	2503	6	FSM	ENSG00000106682.16	ENST00000353999.6	2503	6	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_1	336.836221330189	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	7	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_166089.known	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_1	1395.73090171422	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	7	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_16609.known	chr1	-	1738	9	FSM	ENSG00000117533.15	ENST00000474047.5	1738	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	50.4876222454574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTAAATGCTTTTGTC	5	True	NA	NA	False	AATGAA	-2	NA	171742060	171701091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_171702085_171704386_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_166091.known	chr7	+	2698	7	FSM	ENSG00000106682.16	ENST00000678815.1	2698	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1614.9734431941	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAGCTGCTCATGGA	9	True	NA	NA	False	AATAAA	-45	NA	74174357	74197122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74178655_74178827_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_166092.known	chr7	+	2776	5	FSM	ENSG00000106682.16	ENST00000495187.2	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_1	376.586311487818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACCTTACGTAATA	4	True	NA	NA	False	AGTAAA	-39	NA	74174352	74197076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740
transcript_166097.known	chr7	-	1685	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_7	136.578365783165	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGACCATGTGAAGCC	-2	True	NA	-25	True	AATAAA	-23	NA	74254399	74231501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_166104.known	chr7	-	1635	10	FSM	ENSG00000049541.11	ENST00000621097.4	1635	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	399.264168869697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTGACCATGTGAAG	NA	False	NA	-27	True	AATAAA	-21	NA	74254458	74231503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249738_74249781_74252428_74252499_74254270
transcript_166106.known	chr7	-	1576	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_6	370.175567288393	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCATGTGAAGCCTCG	8	True	NA	-22	True	AATAAA	-26	NA	74254389	74231498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_16612.known	chr1	-	4977	8	FSM	ENSG00000117533.15	ENST00000236192.12	4977	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	18.4844115239776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCACTTTGGCTTATTC	0	True	NA	NA	False	AATAAA	-22	NA	171742065	171700159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_166125.known	chr7	-	1029	2	FSM	ENSG00000287815.2	ENST00000661689.2	1050	2	21	0	21	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGAGACCTTGTCTCA	24	False	NA	NA	False	NA	NA	NA	74289286	74280746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74281551_74289061
transcript_166129.known	chr7	+	5623	17	FSM	ENSG00000106665.16	ENST00000223398.11	5623	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	63.6826850486064	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCAGTTGGCTTGTCT	-31	True	NA	20	True	AATAAA	-20	NA	74289406	74405935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74372931_74373037_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
transcript_166136.known	chr7	+	5445	16	FSM	ENSG00000106665.16	ENST00000361545.9	5445	16	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	22.4162639369028	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACCCCGGCAGTTGGCT	37	True	NA	15	True	AATAAA	-15	NA	74289474	74405930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
transcript_166148.nic	chr7	+	3385	12	ISM	ENSG00000106665.16	ENST00000361545.9	5445	16	-89	16317	-21	181	5prime_fragment	FALSE	canonical	3	160	junction_7	22.5945213867038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTGGGTGCAGTGGCT	NA	False	NA	NA	False	NA	NA	NA	74289385	74389613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74375886_74376823_74380805_74380864_74386520_74386605_74389102
transcript_166159.nic	chr7	+	1971	4	ISM	ENSG00000106665.16	ENST00000223398.11	5623	17	30	51128	30	-26234	5prime_fragment	FALSE	canonical	3	172	junction_3	11.0855260988773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGGCAGCAGTCCCTGT	-1	True	NA	NA	False	AATAAA	-25	NA	74289436	74354807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879
transcript_166167.known	chr7	+	3430	27	FSM	ENSG00000006704.11	ENST00000265755.7	3430	27	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_18	24.4167768979208	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAGAGTG	NA	False	NA	NA	False	AGTAAA	-5	NA	74453789	74602590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555392_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_166168.known	chr7	+	3284	27	FSM	ENSG00000006704.11	ENST00000424337.7	3284	27	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	20.8939276589576	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGCCTTTACTTTTA	-11	True	NA	NA	False	AGTAAA	-20	NA	74453905	74602605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555437_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_166172.nnic	chr7	+	3213	27	NNC	ENSG00000006704.11	novel	2274	20	NA	NA	388	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	31.4749830216478	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGCCTTTACTTTTA	243	False	NA	NA	False	AGTAAA	-20	NA	74454357	74602605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_74454513_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555392_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_16618.known	chr1	-	1193	8	FSM	ENSG00000117533.15	ENST00000367740.2	1193	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.6915145276642	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCAGTAAATATATTTT	-9	True	NA	-34	True	ACTAAA	-3	NA	171742074	171703949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719219_171728523_171728571_171738348_171738464_171741909
transcript_166196.known	chr7	+	4515	35	FSM	ENSG00000263001.8	ENST00000573035.6	4515	35	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_9	680.075352022896	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	-27	True	NA	NA	False	AATAAA	-27	NA	74657717	74760692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_166202.known	chr7	+	4412	34	FSM	ENSG00000263001.8	ENST00000621734.4	4412	34	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	660.010931539824	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	13	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_166205.known	chr7	+	4415	34	FSM	ENSG00000263001.8	ENST00000614986.4	4415	34	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_11	528.292003319518	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	13	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_166217.known	chr7	+	4352	33	FSM	ENSG00000263001.8	ENST00000620879.4	4352	33	0	0	0	0	multi-exon	FALSE	canonical	3	915	junction_10	488.042661709443	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	13	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_16622.nic	chr1	+	2407	9	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	6	54	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	101.383476834246	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACTTGGGTTGGTTTGT	-14	True	NA	27	True	AATAAA	-29	NA	171781669	171796957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_171781796_171781987_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_166250.known	chr7	+	979	10	FSM	ENSG00000263001.8	ENST00000443166.5	979	10	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_9	75.9429610519193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCCTAGCCAACAGGT	23	False	NA	NA	False	AATAAA	-18	NA	74658030	74717066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893
transcript_166256.nic	chr7	+	638	3	ISM	ENSG00000263001.8	ENST00000443166.5	979	10	-355	25953	9	5	5prime_fragment	FALSE	canonical	3	1506	junction_1	105	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTGTATTTTTATCTT	218	False	NA	43	True	AAAAAG	-18	NA	74657675	74691113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_74658069_74689123_74689228_74690972
transcript_166269.known	chr7	-	2130	8	FSM	ENSG00000277072.5	ENST00000426587.5	2130	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	26.5160713684423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGAAGCCCCATTGT	NA	False	NA	-25	True	AGTAAA	-16	NA	74890610	74882162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_166273.nic	chr7	-	1003	7	ISM	ENSG00000289346.1	ENST00000625377.3	4346	23	-20	87011	-20	-87011	5prime_fragment	FALSE	canonical	3	24	junction_3	27.2605738914075	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGGAGAAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	74890605	74883160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_16628.known	chr1	+	3368	8	FSM	ENSG00000010165.20	ENST00000361735.4	3368	8	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_4	16.4577380844739	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGAATTTTGTCTTT	-24	True	NA	14	True	ATTAAA	-16	NA	171781659	171797716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_166280.nic	chr7	-	1821	6	NIC	ENSG00000277072.5	novel	2130	8	NA	NA	0	252	intron_retention	FALSE	canonical	3	14	junction_5	26.7656496278346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGGAGAAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	74890610	74883160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890270
transcript_166281.known	chr7	-	1047	5	FSM	ENSG00000277072.5	ENST00000611766.4	1047	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	29.978117018919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCCTCTGCTGTGG	-1	True	NA	NA	False	NA	NA	NA	74890566	74883766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_166282.nic	chr7	-	1575	5	NIC	ENSG00000277072.5	novel	1026	6	NA	NA	5	252	intron_retention	FALSE	canonical	3	24	junction_1	32.5192250830182	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGGAGAAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	74890605	74883160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_166288.known	chr7	-	578	3	FSM	ENSG00000196275.16	ENST00000614386.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	40.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTCATTTTATTTTA	75	False	NA	NA	False	AATAAA	-28	NA	74851529	74832632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74832944_74836279_74836384_74851366
transcript_166289.known	chr7	-	3605	16	FSM	ENSG00000196275.16	ENST00000451013.7	3605	16	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	60.7043838797679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTATTGGTAGTTG	-1	False	NA	NA	False	ATTAAA	-15	NA	74851605	74796150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74798266_74801984_74802014_74803297_74803482_74804776_74804861_74806933_74807012_74809107_74809174_74810895_74810953_74812738_74812817_74819553_74819598_74819968_74820024_74822426_74822456_74822623_74822808_74824932_74825053_74832804_74832944_74836279_74836384_74851366
transcript_166304.known	chr7	-	2419	11	FSM	ENSG00000274523.5	ENST00000614461.4	2419	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	108.623017818508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCCGCGTGTATGG	NA	False	NA	NA	False	ATTAAA	-16	NA	75073881	75027121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75028080_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_166306.nnic	chr7	-	2579	11	NNC	ENSG00000274523.5	novel	2309	11	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	106.882178121518	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	-21	True	NA	-27	True	AATAAA	-28	NA	75073838	75042182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073179
transcript_166307.known	chr7	-	2309	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	16.1133485036475	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	15	True	NA	-27	True	AATAAA	-28	NA	75073802	75042182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_16631.known	chr1	+	3022	8	FSM	ENSG00000010165.20	ENST00000362019.7	3022	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	110.230926435629	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	-2	True	NA	15	True	ATTAAA	-17	NA	171781681	171797717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171781796_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_166325.known	chr7	+	1298	5	FSM	ENSG00000174428.19	ENST00000620662.1	1298	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	93.4411579551538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAAAACTTG	46	False	NA	NA	False	NA	NA	NA	75092572	75123877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75092766_75108959_75109064_75112396_75112536_75120890_75121011_75123135
transcript_166328.known	chr7	+	573	3	FSM	ENSG00000174428.19	ENST00000614064.4	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	35.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAGACAAATGGTCATT	9	False	NA	9	True	AATAAA	-20	NA	75092599	75112699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75092766_75108959_75109064_75112396
transcript_166329.known	chr7	+	3551	16	FSM	ENSG00000174428.19	ENST00000472837.7	3551	16	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_14	70.5021985472794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTAGTTGACTTTTC	-1	True	NA	NA	False	ATTAAA	-22	NA	75092589	75149817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75092766_75108959_75109064_75112396_75112536_75120890_75121011_75123135_75123320_75123487_75123517_75125915_75125971_75126341_75126386_75133134_75133213_75135000_75135058_75136784_75136851_75138949_75139028_75141102_75141187_75142481_75142666_75143949_75143979_75147693
transcript_166338.known	chr7	-	5867	15	FSM	ENSG00000272391.6	ENST00000615331.5	5867	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	52.2121359729435	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-2	True	NA	NA	False	AATAAA	-19	NA	75486299	75416785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75485863
transcript_166341.known	chr7	-	3690	13	FSM	ENSG00000272391.6	ENST00000607367.5	3690	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	45.5786865395073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTCCCCTGTCCCTGT	NA	False	NA	NA	False	AAAAAG	-4	NA	75442719	75418795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75442144
transcript_166356.nic	chr7	+	1128	8	FSM	ENSG00000205583.14	ENST00000684904.1	1100	8	-28	0	2	0	multi-exon	FALSE	canonical	3	38	junction_3	29.7787761703546	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	75359202	75366630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75359410_75361373_75361460_75361971_75362089_75364632_75364757_75365254_75365354_75365563_75365644_75365951_75366060_75366323
transcript_166368.nnic	chr7	+	1004	7	ISM	ENSG00000205583.14	ENST00000687422.1	1711	8	2	1016	2	0	5prime_fragment	FALSE	canonical	3	60	junction_3	22.3960562004415	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	75359202	75366630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254_75365354_75365563_75365644_75365951_75366060_75366323
transcript_166382.nic	chr7	+	1348	6	FSM	ENSG00000223705.10	ENST00000689022.1	1269	6	-85	6	-53	0	multi-exon	FALSE	canonical	3	121	junction_4	112.718410208803	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410268	75416786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
transcript_166384.nic	chr7	+	1356	6	FSM	ENSG00000223705.10	ENST00000691741.1	1283	6	-81	8	-53	0	multi-exon	FALSE	canonical	3	103	junction_4	117.894868420979	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410268	75416786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
transcript_166392.nnic	chr7	+	1576	5	ISM	ENSG00000205583.14	ENST00000687422.1	1711	8	2	1016	2	0	intron_retention	FALSE	canonical	3	60	junction_3	25.2524751262129	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	75359202	75366630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254_75365354_75365563
transcript_166394.nic	chr7	+	1558	5	FSM	ENSG00000223705.10	ENST00000687621.1	1476	5	-83	1	-53	0	multi-exon	FALSE	canonical	3	169	junction_1	89.5610825079733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410268	75416786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_16640.nic	chr1	+	2589	7	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-145	54	intron_retention	FALSE	canonical	3	28	junction_4	119.289097946497	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACTTGGGTTGGTTTGT	8405	False	NA	27	True	AATAAA	-29	NA	171781514	171796957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171792016_171792236_171794395_171794528_171796481
transcript_166403.known	chr7	+	1836	8	FSM	ENSG00000223705.10	ENST00000457988.5	1836	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	146.388356847149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-1	True	NA	17	True	AATAAA	-18	NA	75410361	75416787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75410461_75410605_75410727_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_166404.nnic	chr7	-	2680	10	NNC	ENSG00000127957.19	novel	1490	9	NA	NA	2	17338	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	10.295630140987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATTTGTCTTACTTG	-23	True	NA	NA	False	NA	NA	NA	75528121	75490408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75491624_75507780_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75525964_75527564
transcript_166405.nnic	chr7	-	2753	10	NNC	ENSG00000127957.19	novel	1490	9	NA	NA	-2	17338	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.295630140987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATTTGTCTTACTTG	NA	False	NA	NA	False	NA	NA	NA	75528150	75490408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75491624_75507780_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75526008_75527564
transcript_16641.nic	chr1	+	3210	7	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	28	junction_4	119.289097946497	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGAATTTTGTCTTT	-31	True	NA	14	True	ATTAAA	-16	NA	171781652	171797716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171792016_171792236_171794395_171794528_171796481
transcript_166410.known	chr7	-	1490	9	FSM	ENSG00000127957.19	ENST00000418756.5	1490	9	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_5	10.2034001685713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTTTCTCATA	-25	True	NA	NA	False	ATTAAA	-15	NA	75528123	75507752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514780_75515717_75515829_75516093_75516221_75525904_75525964_75527564
transcript_166418.known	chr7	-	1316	8	FSM	ENSG00000127957.19	ENST00000394921.8	1316	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	10.0974840268985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCTCATAGTTCTT	47	False	NA	NA	False	ATTAAA	-21	NA	75528051	75507746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75507868_75510930_75511115_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75525964_75527564
transcript_166424.nnic	chr7	-	5677	31	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27597	-1791	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_29	20.0191297402149	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGAGCGTAGTGACGG	29	False	NA	NA	False	ACTAAA	-12	NA	75639440	75535878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
transcript_166425.known	chr7	-	8009	31	FSM	ENSG00000127946.17	ENST00000336926.11	8009	31	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_30	27.0596255209368	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCGTGGTGGTGATTGA	-3	True	NA	34	True	AATAAA	-17	NA	75738941	75533297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75738800
transcript_166436.nnic	chr7	-	687	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1608	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_3	30.4740326617051	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	1494	False	NA	-11	True	AATAAA	-14	NA	75788288	75769537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788119
transcript_166440.known	chr7	+	1831	5	FSM	ENSG00000005486.17	ENST00000454791.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	196.100101988755	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCTGCCTTTGTAT	3	True	NA	-26	True	NA	NA	NA	75879003	75888884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75879261_75881364_75881487_75881828_75882237_75883697_75883849_75887991
transcript_166444.known	chr7	+	1721	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	33.0689515339624	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCGTGTGCTTCCT	-17	True	NA	16	True	TATAAA	-20	NA	75879033	75888926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
transcript_166470.known	chr7	+	2446	16	FSM	ENSG00000127948.16	ENST00000461988.6	2446	16	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	45.6657420830977	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	-2	True	NA	26	True	AATAAA	-16	NA	75915154	75986855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158_75986242_75986336
transcript_166481.known	chr7	+	2532	15	FSM	ENSG00000127948.16	ENST00000394893.5	2532	15	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	46.6657677270076	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	7	True	NA	26	True	AATAAA	-16	NA	75915163	75986855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158
transcript_166513.known	chr7	-	1398	12	FSM	ENSG00000189077.11	ENST00000493111.7	1398	12	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_6	19.3570197829117	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGGTTATTTAAAA	26	True	NA	2	True	AATACA	-22	NA	75994595	75986830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_166514.known	chr7	-	1161	12	FSM	ENSG00000189077.11	ENST00000439537.5	1161	12	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	62.2637684332079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGCGTGTGTGTTCTC	47	False	NA	-7	True	AATAAA	-17	NA	75994574	75986984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75987224_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_166520.known	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_9	15.8682072081253	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-35	True	NA	-63	True	NA	NA	NA	75994656	75987040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_166532.known	chr7	+	1028	4	FSM	ENSG00000127948.16	ENST00000493973.1	1028	4	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	12.328828005938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	3632	False	NA	26	True	AATAAA	-16	NA	75985569	75986855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75985850_75985922_75986069_75986158_75986242_75986336
transcript_166537.nnic	chr7	-	1222	9	NNC	ENSG00000127952.17	novel	1415	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_2	69.6419413859206	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-36	True	NA	-5	True	NA	NA	NA	76048012	75996341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75996600_76000889_76000955_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_166540.known	chr7	-	1415	9	FSM	ENSG00000127952.17	ENST00000248600.5	1415	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	75.3913746724385	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTGTACTGATTCTT	-27	True	NA	-1	True	NA	NA	NA	76048003	75996337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047661
transcript_166541.known	chr7	-	1147	9	FSM	ENSG00000127952.17	ENST00000431581.5	1147	9	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_8	58.1055074842308	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	23	True	NA	-72	True	NA	NA	NA	76047953	75996408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
transcript_166542.known	chr7	-	1411	9	FSM	ENSG00000127952.17	ENST00000359697.8	1411	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	75.7013044801739	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-24	True	NA	-5	True	NA	NA	NA	76048000	75996341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
transcript_166547.nic	chr7	-	1124	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	67.0303007936694	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-36	True	NA	-5	True	NA	NA	NA	76048012	75996341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_166548.nic	chr7	-	1133	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	61.7483371667379	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	-36	True	NA	-29	True	NA	NA	NA	76048012	75996365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_166551.known	chr7	-	953	7	FSM	ENSG00000127952.17	ENST00000340062.9	953	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	86.4073042180013	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-7	True	NA	-5	True	NA	NA	NA	76047983	75996341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047811
transcript_166555.known	chr7	+	2170	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	0	0	0	0	multi-exon	FALSE	canonical	3	2397	junction_4	107.789653376379	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	17	True	NA	18	True	AATAAA	-23	NA	76048105	76067508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_166560.known	chr7	+	2020	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	844.052421236927	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	-4	True	NA	16	True	AATAAA	-21	NA	76048084	76067506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_166562.known	chr7	+	648	2	FSM	ENSG00000146701.12	ENST00000461263.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCTCGCATTGCCTT	-38	True	NA	7	True	ATTAAA	-19	NA	76048050	76049047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76048227_76048575
transcript_166568.known	chr7	+	2150	4	FSM	ENSG00000177679.16	ENST00000612155.1	2150	4	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_3	15.4344492037203	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	-7	True	NA	22	True	AATAAA	-18	NA	76282613	76287288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76282873_76282963_76283102_76283523_76283603_76285614
transcript_166569.known	chr7	+	777	3	FSM	ENSG00000106211.10	ENST00000248553.7	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	1459	junction_1	608	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGGCCCAGGCCCTG	-4	True	NA	40	True	AATAAA	-17	NA	76302672	76304292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76303077_76303801_76303866_76303983
transcript_166570.known	chr7	+	1455	2	FSM	ENSG00000106211.10	ENST00000447574.1	1455	2	0	0	0	0	multi-exon	FALSE	canonical	3	2675	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTCTCAAATAAAGTTC	11	True	NA	8	True	NA	NA	NA	76302687	76304260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76303866_76303983
transcript_166572.known	chr7	-	3705	2	FSM	ENSG00000170027.7	ENST00000307630.5	3705	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGTGCTCCTTAGCTTC	-2	True	NA	-21	True	AATAAA	-14	NA	76358991	76326798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76330234_76358721
transcript_166579.known	chr7	-	2800	11	FSM	ENSG00000146700.9	ENST00000275560.4	2800	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	22.3886131772381	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	9	True	NA	-13	True	AATAAA	-21	NA	76409697	76389336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76400285_76400592_76401007_76401044_76404306_76404506_76409413
transcript_16658.known	chr1	-	1456	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	1	True	NA	-4	True	ATTAAA	-16	NA	172444069	172441456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_172442831_172443987
transcript_166589.known	chr7	+	1483	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	14.2192651005599	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	-12	True	NA	NA	False	AATAAA	-15	NA	76397517	76442071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
transcript_16659.known	chr1	-	2630	1	FSM	ENSG00000135845.10	ENST00000367728.1	2630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	11	True	NA	-4	True	ATTAAA	-16	NA	172444086	172441456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_172441500_172444100
transcript_166592.nnic	chr7	-	2483	9	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_7	25.0446476317795	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-16	True	NA	-13	True	AATAAA	-21	NA	76409722	76389336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76404306_76404506_76409413
transcript_166597.nnic	chr7	-	2276	8	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_7	26.4544275064473	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-8	True	NA	-13	True	AATAAA	-21	NA	76409714	76389336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76409413
transcript_16660.known	chr1	+	5625	24	FSM	ENSG00000094975.14	ENST00000263688.4	5625	24	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	29.4625455095398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGCTCTTCTGTCTTT	1	True	NA	33	True	AATAAA	-23	NA	172533149	172611833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
transcript_166601.nnic	chr7	-	2447	7	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-75	0	intron_retention	FALSE	canonical	2	12	junction_6	27.6731920015663	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	NA	False	NA	-13	True	AATAAA	-21	NA	76409772	76389336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76409413
transcript_166615.nic	chr7	+	2618	11	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	67.8067843213347	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461655	76505991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76463544_76463710_76477113_76477179_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_166616.known	chr7	+	2641	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	67.6493902411544	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	0	True	NA	16	True	AATAAA	-16	NA	76461708	76505991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_166623.known	chr7	+	2472	10	FSM	ENSG00000091073.20	ENST00000413936.6	2472	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	75.4955644188026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTCCTGAGTGTGTGC	7	False	NA	19	True	AATAAA	-19	NA	76461715	76505994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_16663.known	chr1	+	5495	22	FSM	ENSG00000094975.14	ENST00000616058.4	5495	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	50.2425409903805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACTGGCTCTTCTGTCT	-31	True	NA	31	True	AATAAA	-21	NA	172533117	172611831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
transcript_166631.nic	chr7	+	2553	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	32.9919556225827	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461655	76505991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_166633.nic	chr7	+	2428	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	60.2078703685904	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461671	76505991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76463653_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_166634.nic	chr7	+	2608	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	72.9105658823462	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461671	76505991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76476942_76477179_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_166635.nic	chr7	+	2437	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	72.2748526182354	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461671	76505991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76477113_76477179_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_166643.nic	chr7	+	2389	9	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	45.5679437762996	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461654	76505991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_16665.nic	chr1	+	1400	7	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	-251	42714	-251	-1396	5prime_fragment	FALSE	canonical	3	146	junction_2	35.1378238749452	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATGGAAGTAGAAAAAGA	NA	False	NA	23	True	AAGAAA	-1	NA	172532866	172569117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018
transcript_166658.nnic	chr7	+	1644	7	Fusion	ENSG00000243566.7_ENSG00000230305.2	novel	2250	6	NA	NA	-216	-4809	multi-exon	FALSE	non_canonical	0	0	junction_6	39.8538998509974	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	76510308	76527883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_+_76510738_76510902_76511053_76511656_76511883_76513083_76513164_76513946_76514077_76515044_76515457_76527666
transcript_16666.nic	chr1	+	1171	6	ISM	ENSG00000094975.14	ENST00000610051.5	2925	23	-198	41162	-133	-1396	5prime_fragment	FALSE	canonical	3	74	junction_2	61.7297335163534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATGGAAGTAGAAAAAGA	17	False	NA	23	True	AAGAAA	-1	NA	172532984	172569117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_172533498_172551511_172551627_172555868_172556024_172557279_172557418_172557643_172557795_172569018
transcript_166660.nnic	chr7	+	1564	6	Fusion	ENSG00000243566.7_ENSG00000230305.2	novel	1041	5	NA	NA	-216	-4809	multi-exon	FALSE	non_canonical	0	0	junction_5	39.4380526902635	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	76510308	76527883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_+_76510738_76510902_76511053_76511656_76511883_76513946_76514077_76515044_76515457_76527666
transcript_166663.known	chr7	-	1587	8	FSM	ENSG00000146707.15	ENST00000424818.5	1587	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	22.1036519283902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCCTGTGTCTGCTTC	17	False	NA	NA	False	NA	NA	NA	76627261	76610027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76618496_76618616_76625521_76625684_76625999_76626216_76626707
transcript_166665.known	chr7	-	1528	7	FSM	ENSG00000146707.15	ENST00000310842.9	1528	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	12.7202812687281	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	-1	False	NA	NA	False	AATAAA	-15	NA	76627279	76609985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76625521_76625684_76625999_76626216_76626707
transcript_166670.known	chr7	-	1259	5	FSM	ENSG00000146707.15	ENST00000275569.8	1259	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.4656631564937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	38	False	NA	NA	False	AATAAA	-15	NA	76627240	76609985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76610216_76618182_76618301_76625521_76625684_76625999_76626216_76626707
transcript_166671.nic	chr7	+	1724	4	NIC	ENSG00000205485.13	novel	748	4	NA	NA	-97	579	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	4.92160768674447	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAACAGGTTGCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	76549262	76621967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76549862_76551419_76551523_76615493_76615664_76621115
transcript_166674.nic	chr7	+	1130	3	NIC	ENSG00000205485.13	novel	2667	3	NA	NA	-29	-5399	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	6	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGGGGCAGGTGGCA	-12	True	NA	NA	False	NA	NA	NA	76549330	76615989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76549862_76551419_76551523_76615493
transcript_16668.nic	chr1	+	2122	3	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	-133	57078	-133	2601	5prime_fragment	FALSE	canonical	3	146	junction_2	45	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGTAAAGTATCTCATTA	17	False	NA	NA	False	NA	NA	NA	172532984	172554753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_172533498_172551511_172551627_172553259
transcript_166680.known	chr7	+	2316	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	67.917311826034	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAGCTAGAAGACAC	-5	True	NA	NA	False	NA	NA	NA	77538034	77639280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_166683.known	chr7	-	3168	3	FSM	ENSG00000214293.10	ENST00000654794.2	3180	3	12	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	7	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGCTATCCAGTTTA	-14	True	NA	-11	True	AATAAA	-4	NA	77696265	77681580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77684252_77685201_77685329_77695895
transcript_166684.known	chr7	-	2856	3	FSM	ENSG00000214293.10	ENST00000663654.2	2875	3	19	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	59	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGGAGCTGTGAGAAAT	-4	True	NA	-37	True	NA	NA	NA	77696255	77681606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77684252_77685201_77685329_77696171
transcript_166685.known	chr7	-	902	2	FSM	ENSG00000214293.10	ENST00000447009.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATCACATATACAGAAG	-2	True	NA	NA	False	ATTAAA	-37	NA	77696253	77684784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77685329_77695895
transcript_166687.known	chr7	-	2283	4	FSM	ENSG00000214293.10	ENST00000659053.1	2283	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	57.9885046079537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCTTGTAGTTCACAT	-4	True	NA	NA	False	AATAAA	-31	NA	77696255	77657658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77659319_77661197_77661334_77685201_77685329_77695895
transcript_166689.nnic	chr7	+	1335	3	NNC	ENSG00000187257.16	novel	6406	8	NA	NA	-61	-35307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTCTACTTAACTTTA	NA	False	NA	NA	False	AATAGA	-40	NA	77696397	77738046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_77697056_77736409_77736527_77737486
transcript_16669.known	chr1	+	756	2	FSM	ENSG00000094975.14	ENST00000608566.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGAAGTAATTTATA	74	False	NA	NA	False	NA	NA	NA	172533382	172552152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_172533498_172551511
transcript_166691.nic	chr7	+	800	3	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-61	33574	-61	-23905	5prime_fragment	FALSE	canonical	3	76	junction_2	15	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAAGACTTACAAATTA	NA	False	NA	-51	True	AAAACA	-39	NA	77696397	77749448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_77697056_77736409_77736527_77749423
transcript_166692.nic	chr7	+	855	3	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-61	33519	-61	-23850	5prime_fragment	FALSE	canonical	3	76	junction_2	15	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAATGAAAAACGGAAGCG	NA	False	NA	4	True	ATTAAA	-34	NA	77696397	77749503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_77697056_77736409_77736527_77749423
transcript_166693.nic	chr7	+	775	2	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-61	46496	-61	-36827	5prime_fragment	FALSE	canonical	3	106	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTATTCAGTGATT	NA	False	NA	NA	False	AGTAAA	-15	NA	77696397	77736526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_77697056_77736409
transcript_166694.known	chr7	-	877	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACATGACTCTTGA	-30	True	NA	-11	True	AATAAA	-18	NA	77798434	77793727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77794424_77798253
transcript_166695.known	chr7	+	4793	18	FSM	ENSG00000006576.16	ENST00000307305.12	4793	18	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_12	28.1740757916352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTTTTTTTTTTAATT	22	True	NA	19	True	AATAAA	-16	NA	77798804	77957225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
transcript_166696.known	chr7	+	1977	12	FSM	ENSG00000006576.16	ENST00000424760.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	16.0988680881299	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTGTTTT	30	True	NA	4	True	AATAAA	-15	NA	77798812	77940459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029
transcript_1667.known	chr1	+	695	8	FSM	ENSG00000157916.20	ENST00000306256.13	695	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	500.588347724506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATGGGAAGAGAAGGTA	-2	True	NA	NA	False	NA	NA	NA	2391842	2403064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2391959_2395607_2395649_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_166702.known	chr7	+	1738	9	FSM	ENSG00000006576.16	ENST00000415251.6	1738	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	13.6565002837477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTACTCTTTTTGAGCT	20	True	NA	NA	False	AATAAA	-33	NA	77798887	77923392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622
transcript_166708.known	chr7	-	2013	9	FSM	ENSG00000187391.22	ENST00000628781.1	2013	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	11.9889271830302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	-13	True	NA	-21	True	AATAAA	-37	NA	78771080	78255788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
transcript_166709.nic	chr7	-	1130	4	ISM	ENSG00000187391.22	ENST00000628781.1	2013	9	-253	245688	-10	244	5prime_fragment	FALSE	canonical	3	49	junction_2	11.5566238822398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAATTCTGGTAACAGC	-23	True	NA	NA	False	AAAAAG	-8	NA	78771333	78501476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_78501788_78521429_78521646_78627119_78627240_78770850
transcript_166710.known	chr7	+	1082	5	FSM	ENSG00000234456.10	ENST00000414797.6	1082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGATGATGTGTGTC	-24	True	NA	35	True	AATAAA	-29	NA	79453949	79471208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_79454245_79454885_79455008_79458846_79459000_79470593_79470680_79470782
transcript_166711.known	chr7	+	10083	8	FSM	ENSG00000127955.17	ENST00000649796.2	10083	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	27.244171816357	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCATATTATTTTT	-14	True	NA	NA	False	AATAAA	-18	NA	80134830	80226181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_80135279_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_166714.known	chr7	+	3134	6	FSM	ENSG00000127955.17	ENST00000650431.1	3134	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.7157404068281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAATTTTACAAA	-43	True	NA	2	True	AATAAA	-15	NA	80134801	80219388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_80135279_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_166715.known	chr7	+	3237	8	FSM	ENSG00000127955.17	ENST00000649922.1	3237	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.5403171165658	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTTAATAAATCCTAATA	8	True	NA	-24	True	AATGAA	-25	NA	80134852	80219362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_80135274_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_166716.known	chr7	+	1939	8	FSM	ENSG00000127955.17	ENST00000649214.1	1939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.5403171165658	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAACATTGCACAGACT	7	True	NA	9	True	AATAAA	-11	NA	80134851	80218032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_80135279_80188924_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_166723.known	chr7	-	7273	17	FSM	ENSG00000170381.14	ENST00000643230.2	7273	17	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_15	25.6514345359085	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCGTCTGGGGAGCATTT	4	True	NA	-1	True	AATAAA	-19	NA	83649139	83363237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_83368039_83385293_83385434_83386982_83387051_83392554_83392722_83394296_83394339_83396637_83396730_83400027_83400251_83402631_83402777_83405449_83405520_83405944_83406060_83407096_83407240_83408367_83408488_83418389_83418484_83466481_83466602_83469242_83469303_83490113_83490275_83648427
transcript_166733.nic	chr7	-	1936	12	ISM	ENSG00000170381.14	ENST00000642232.1	2675	17	-517	25189	72	10455	5prime_fragment	FALSE	canonical	3	407	junction_10	27.6847662260626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAATCAATGGAAGAAGTA	76	False	NA	NA	False	AAGAAA	-1	NA	83649067	83396684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_83396730_83400027_83400251_83402631_83402777_83405449_83405520_83405944_83406060_83407096_83407240_83408367_83408488_83418389_83418484_83466481_83466602_83469242_83469303_83490113_83490275_83648427
transcript_166735.known	chr7	-	8113	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_10	16.3553078158132	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTGTGTAGCTCAGT	0	True	NA	1	True	AGTAAA	-20	NA	84194789	83955776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_16674.known	chr1	-	1370	2	FSM	ENSG00000203739.5	ENST00000661267.1	1370	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGGAGCCTGTAGCTT	-21	True	NA	-2	True	AATAAA	-23	NA	173477171	173417792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173418623_173476631
transcript_166745.known	chr7	+	4268	6	FSM	ENSG00000198822.11	ENST00000361669.7	4268	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGATAATGGTTTGTTC	-6	True	NA	NA	False	AATAAA	-21	NA	86643908	86864879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_86644873_86765005_86765614_86786260_86787117_86838838_86839906_86850369_86850545_86864281
transcript_166746.known	chr7	+	1811	5	FSM	ENSG00000198822.11	ENST00000439827.1	1811	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.03112887414927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATGGAAACAGAGCAAAA	2	True	NA	NA	False	NA	NA	NA	86644841	86864422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_86644873_86765005_86765614_86786260_86787117_86850369_86850545_86864281
transcript_16675.known	chr1	+	1690	5	FSM	ENSG00000117592.9	ENST00000340385.6	1690	5	0	0	0	0	multi-exon	FALSE	canonical	3	4206	junction_4	178.983763230076	736	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCATATTTTGAA	-3	True	NA	49	True	AATAAA	-28	NA	173477334	173488815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173477493_173481325_173481483_173485360_173485508_173486254_173486402_173487734
transcript_166750.known	chr7	-	6796	22	FSM	ENSG00000164659.15	ENST00000450689.7	6796	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_21	43.7099800763698	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTTCAGTTAAATTT	1	True	NA	-14	True	AATAAA	-23	NA	87059654	86876905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87059324
transcript_166759.known	chr7	+	3954	18	FSM	ENSG00000135164.19	ENST00000447863.5	3954	18	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	54.7968251044026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	NA	False	NA	8	True	AATAAA	-17	NA	87152411	87196325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182016_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_16676.known	chr1	-	2660	6	FSM	ENSG00000183831.7	ENST00000333279.3	2660	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAATAAAAACA	1	True	NA	NA	False	NA	NA	NA	173669851	173608335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173610216_173624786_173624926_173627064_173627160_173646845_173647014_173659090_173659434_173669816
transcript_166760.known	chr7	+	3915	18	FSM	ENSG00000135164.19	ENST00000579677.5	3915	18	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	51.9850257918027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	NA	False	NA	8	True	AATAAA	-17	NA	87152411	87196325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182055_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_166761.known	chr7	+	3702	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_9	32.889770814365	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	13	True	NA	8	True	AATAAA	-17	NA	87152452	87196325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_166765.nic	chr7	+	3610	17	NIC	ENSG00000135164.19	novel	3702	18	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	55	junction_16	51.3864038438185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	NA	False	NA	8	True	AATAAA	-17	NA	87152399	87196325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87195030
transcript_166767.known	chr7	+	2411	17	FSM	ENSG00000135164.19	ENST00000432937.6	2411	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	61.3684759770845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGAAGGCACACTGTT	0	True	NA	NA	False	NA	NA	NA	87152467	87195166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87163494_87163618_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_166773.nic	chr7	-	1417	5	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	200.635864191824	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-7	True	NA	-5	True	AATAAA	-18	NA	87220587	87196161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220216
transcript_166774.known	chr7	-	1273	5	FSM	ENSG00000135185.12	ENST00000433078.5	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	83.2987845049374	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-7	True	NA	-5	True	AATAAA	-18	NA	87220587	87196161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220360
transcript_166775.nnic	chr7	-	1112	5	NNC	ENSG00000135185.12	novel	1273	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	203.19694879599	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-9	True	NA	-5	True	AATAAA	-18	NA	87220589	87196161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220523
transcript_166776.known	chr7	-	1062	4	FSM	ENSG00000135185.12	ENST00000257637.8	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_3	39.2031744746377	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-6	True	NA	-3	True	AATAAA	-20	NA	87219732	87196159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425
transcript_166778.known	chr7	-	601	3	FSM	ENSG00000135185.12	ENST00000423734.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	48	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTAGTGGA	950	False	NA	NA	False	NA	NA	NA	87219630	87197700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87198046_87199006_87199058_87219425
transcript_166779.known	chr7	-	769	2	FSM	ENSG00000224046.3	ENST00000433446.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTGATAACTT	9	True	NA	-5	True	AATAAA	-15	NA	87152282	87151422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87151659_87151749
transcript_166780.known	chr7	-	338	2	FSM	ENSG00000224046.3	ENST00000446309.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAGAAGCAGCATTT	NA	False	NA	-22	True	NA	NA	NA	87152420	87151439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87151659_87152301
transcript_166781.known	chr7	-	1031	2	FSM	ENSG00000135185.12	ENST00000474074.1	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTACTAAAATAACTCGA	954	False	NA	NA	False	NA	NA	NA	87219626	87198227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87199058_87219425
transcript_166784.known	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	37.3303570242176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-13	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
transcript_166788.known	chr7	-	3150	3	FSM	ENSG00000182165.19	ENST00000661943.2	3168	3	18	0	6	0	multi-exon	FALSE	canonical	3	75	junction_2	15.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAACCTCACCCTTTG	-26	True	NA	NA	False	ATTAAA	-15	NA	87345528	87322942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345042
transcript_166789.known	chr7	-	526	3	FSM	ENSG00000182165.19	ENST00000432193.7	561	3	32	3	2	2	multi-exon	FALSE	canonical	1	5	junction_2	50.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTGAGTCCTAATT	0	True	NA	-4	True	AATAAA	-18	NA	87345502	87325349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345233
transcript_166790.known	chr7	-	1241	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	0	6	0	multi-exon	FALSE	canonical	3	52	junction_2	27	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGTTTCTCTCTGG	-26	True	NA	NA	False	AATAAA	-12	NA	87345528	87324589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345304
transcript_166792.known	chr7	+	3205	18	FSM	ENSG00000005469.12	ENST00000331536.8	3205	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	9.65136202446761	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGTGCTTTTTGA	-8	True	NA	4	True	AATAAA	-17	NA	87345663	87399794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205_87359331_87361389_87361572_87361727_87361853_87369375_87369485_87375631_87375726_87375827_87375954_87377348_87377451_87381909_87381994_87382073_87382182_87382412_87382544_87391588_87391713_87392565_87392645_87392729_87392824_87392947_87393068_87398523
transcript_166795.known	chr7	+	1213	4	FSM	ENSG00000005469.12	ENST00000412227.6	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	6.18241233033047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTTTATCTGTATC	-2	True	NA	NA	False	ATTAAA	-20	NA	87345692	87360116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205
transcript_166799.known	chr7	+	2342	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	117.679702568855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	26	True	NA	5	True	AATAAA	-24	NA	87876533	87908373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_166802.known	chr7	+	3655	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	74.1449328975363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTTCCATTGTAAATT	-15	True	NA	NA	False	AATAAA	-28	NA	87876492	87909553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_166805.known	chr7	-	4056	12	FSM	ENSG00000075303.13	ENST00000341119.10	4056	12	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_3	7.74916684404585	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCTGTCAACATTT	12	True	NA	-5	True	AATAAA	-18	NA	87876360	87833567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860571_87860641_87876095
transcript_166808.nic	chr7	+	1473	11	ISM	ENSG00000006634.8	ENST00000431138.5	2342	12	-318	3958	0	-2804	5prime_fragment	FALSE	canonical	3	54	junction_2	123.36125809994	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTAGTTTTATCAACC	1	True	NA	NA	False	AAAAAG	-5	NA	87876215	87904415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291
transcript_166811.nic	chr7	+	1913	11	ISM	ENSG00000006634.8	ENST00000265728.6	3655	12	-625	5138	-348	-2804	5prime_fragment	FALSE	canonical	3	186	junction_7	77.6304708217076	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTAGTTTTATCAACC	NA	False	NA	NA	False	AAAAAG	-5	NA	87875867	87904415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291
transcript_166813.nnic	chr7	+	2975	11	NIC	ENSG00000006634.8	novel	3655	12	NA	NA	-348	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_10	119.193288401655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	NA	False	NA	5	True	AATAAA	-24	NA	87875867	87908373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
transcript_166823.nic	chr7	+	806	5	ISM	ENSG00000006634.8	ENST00000430279.5	1274	11	-153	19988	-40	2215	5prime_fragment	FALSE	canonical	3	335	junction_2	58.4481607922781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATTTTATAATTGTT	-10	True	NA	NA	False	AGTAAA	-18	NA	87876446	87887398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328
transcript_166824.known	chr7	+	574	3	FSM	ENSG00000006634.8	ENST00000486925.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	45.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAAGGGCTATATCCT	-17	True	NA	NA	False	NA	NA	NA	87876582	87885183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052_87878226_87884978
transcript_166825.known	chr7	+	797	2	FSM	ENSG00000006634.8	ENST00000495067.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTGTCTGGACTAGT	-21	True	NA	NA	False	NA	NA	NA	87876486	87878557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052
transcript_166827.known	chr7	+	9144	31	FSM	ENSG00000008277.15	ENST00000398209.7	9144	31	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_28	9.89438673637173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACGACTCTTCTTTTTCT	135	False	NA	9	True	AATAAA	-19	NA	87934419	88202889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87934551_87935025_87935187_87978335_87978413_88075625_88075693_88108175_88108259_88114583_88114648_88116744_88116815_88125588_88125660_88128601_88128677_88130387_88130460_88131268_88131436_88132866_88132952_88134328_88134420_88135979_88136032_88143025_88143126_88145124_88145197_88145414_88145508_88148976_88149058_88150980_88151032_88151256_88151321_88153220_88153327_88155886_88156007_88163011_88163181_88165831_88165947_88168136_88168228_88171543_88171562_88181504_88181606_88181957_88182025_88186614_88186702_88193115_88193240_88196470
transcript_166829.known	chr7	+	9334	30	FSM	ENSG00000008277.15	ENST00000398204.8	9334	30	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_28	7.81915085512007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACGACTCTTCTTTTTCT	NA	False	NA	9	True	AATAAA	-19	NA	87934142	88202889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87934551_87935025_87935187_87978335_87978413_88075625_88075693_88108175_88108259_88114583_88114648_88116744_88116815_88125588_88125660_88128601_88128677_88130387_88130460_88131268_88131436_88132866_88132952_88134328_88134420_88135979_88136032_88143025_88143126_88145124_88145197_88145414_88145508_88148976_88149058_88150980_88151032_88151256_88151321_88153220_88153327_88155886_88156007_88163011_88163181_88165831_88165947_88168136_88168228_88171543_88171562_88181504_88181606_88181957_88182025_88193115_88193240_88196470
transcript_166839.known	chr7	-	1972	8	FSM	ENSG00000075142.14	ENST00000265729.7	1972	8	0	0	0	0	multi-exon	TRUE	canonical	3	2280	junction_3	169.939845299471	710	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCCTCATTTCACTA	14	True	NA	-6	True	AATAAA	-17	NA	88220038	88205114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
transcript_16684.known	chr1	+	3414	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_8	9.29587129539216	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	28	True	NA	NA	False	AATAAA	-24	NA	173714980	173786692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_166843.known	chr7	+	1219	5	FSM	ENSG00000164647.9	ENST00000297205.7	1219	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	8.25757228245687	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATGTTTCTCTTTGTA	-11	True	NA	7	True	AATAAA	-16	NA	90154468	90164827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913_90162079_90164476
transcript_166845.known	chr7	+	6984	6	FSM	ENSG00000157214.14	ENST00000394621.7	6984	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	17.5088549025914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGCCTTCTAATACTTT	-6	True	NA	87	True	ATTAAA	-20	NA	90211739	90237683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90212046_90216490_90216604_90225049_90225575_90226970_90227499_90229871_90230037_90232336
transcript_166848.known	chr7	+	2456	6	FSM	ENSG00000157214.14	ENST00000394626.5	2456	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	16.7523132730975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGAGGCCTTCTAAT	-2	True	NA	82	True	ATTAAA	-15	NA	90211743	90237678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90212046_90225049_90225575_90226970_90227499_90229871_90230037_90232336_90232485_90236890
transcript_166853.known	chr7	+	6873	5	FSM	ENSG00000157214.14	ENST00000287908.7	6873	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.8354976529934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATACACGTGGATTT	NA	False	NA	35	True	AATAAA	-36	NA	90211685	90237631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90212046_90225049_90225575_90226970_90227499_90229871_90230037_90232336
transcript_166860.known	chr7	+	3488	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	159	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	16	True	NA	38	True	ATTAAA	-17	NA	90403466	90415954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90403550_90405518_90405613_90412643
transcript_166861.known	chr7	+	3533	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	183.376358587711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	10	True	NA	38	True	ATTAAA	-17	NA	90403460	90415954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
transcript_166862.known	chr7	+	7489	10	FSM	ENSG00000105793.16	ENST00000222511.11	7489	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	25.9277248053169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTCTCGAAATATCTT	12	True	NA	20	True	AATAAA	-17	NA	90346715	90391453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_166868.known	chr7	+	1740	8	FSM	ENSG00000105793.16	ENST00000257659.12	1740	8	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_2	47.4363160630403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAATATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	90346664	90385890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90346775_90352815_90353010_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_166872.known	chr7	+	5171	15	FSM	ENSG00000058091.17	ENST00000380050.8	5171	15	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_13	17.430474135015	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTAGGTACATCTTC	16	True	NA	22	True	AATAAA	-20	NA	90596320	91210590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90863174_90863270_90899290_90899354_90917600_90917725_90955696_90955818_90984147_90984242_91045896_91045961_91079431_91079481_91112541_91112682_91118064_91118209_91207164
transcript_166876.known	chr7	-	581	4	FSM	ENSG00000127989.14	ENST00000456229.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	54.0514158515349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGTTCTCCTGAATCCT	23	True	NA	NA	False	NA	NA	NA	91880679	91874314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_91874765_91876877_91876927_91880054_91880114_91880656
transcript_166877.known	chr7	-	1639	4	FSM	ENSG00000127989.14	ENST00000406735.6	1639	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	52.0917993119412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGAAGGGGGCCTGT	10	True	NA	NA	False	NA	NA	NA	91880692	91873321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_91874765_91876877_91876979_91880054_91880114_91880656
transcript_166878.known	chr7	-	554	3	FSM	ENSG00000127989.14	ENST00000442961.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	71.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACGTTCTCCTGAAT	12	True	NA	NA	False	NA	NA	NA	91880690	91874317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_91874765_91880054_91880114_91880642
transcript_166881.nic	chr7	+	1191	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-16	69943	0	4818	5prime_fragment	TRUE	canonical	3	17	junction_3	4.95695759225642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAATAAAGAAGAAATAC	-6	True	NA	NA	False	GATAAA	-12	NA	91940861	92000870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_166882.nic	chr7	+	1271	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-16	69863	0	4898	5prime_fragment	FALSE	canonical	3	17	junction_3	4.95695759225642	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTGAGCTAAAGGATAAA	-6	True	NA	NA	False	ATTAAA	-30	NA	91940861	92000950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_166883.known	chr7	+	1356	7	FSM	ENSG00000127914.19	ENST00000394564.5	1356	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.28099317258495	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTGTCATTTATAA	58	False	NA	NA	False	AATACA	-15	NA	91940925	91996052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602
transcript_166886.nic	chr7	+	957	2	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-659	22266	-573	-22266	5prime_fragment	FALSE	canonical	3	30	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCAAGCAGTAAACATGAT	NA	False	NA	NA	False	AAAAAG	-8	NA	91940266	91973786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_91941148_91973710
transcript_166890.known	chr7	-	3155	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_9	71.8207645616658	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-22	True	NA	-23	True	ATTAAA	-17	NA	92134477	92112152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
transcript_166891.known	chr7	-	1729	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	213.768537568841	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATCTAGGTAATTGGC	-1	True	NA	62	True	NA	NA	NA	92134803	92113411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
transcript_166894.nic	chr7	-	732	4	ISM	ENSG00000001630.18	ENST00000003100.13	3155	10	-62	15390	-36	-13849	5prime_fragment	FALSE	canonical	3	669	junction_3	87.4922218765125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATACTTTGAGAGTTGGG	8414	False	NA	NA	False	AAAAAG	-8	NA	92134539	92127542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92127632_92128879_92129057_92131773_92131873_92134172
transcript_166898.known	chr7	+	6340	20	FSM	ENSG00000001629.10	ENST00000265742.8	6340	20	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_3	15.8381705202767	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTTTGTCTCATTAC	-21	True	NA	14	True	ATTAAA	-19	NA	92245973	92401383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92246520_92294888_92295167_92307358_92307657_92319329_92319513_92327782_92327901_92343023_92343233_92344977_92345067_92350949_92351095_92352475_92352643_92362184_92362274_92371476_92371608_92386508_92386644_92387797_92387885_92387974_92388042_92389970_92390117_92391165_92391345_92392240_92392293_92396364_92396477_92397722_92397860_92398211
transcript_166911.known	chr7	-	855	7	ISM	ENSG00000001631.17	ENST00000690529.1	3829	18	0	36159	0	665	5prime_fragment	FALSE	canonical	0	0	junction_5	45.5216676124922	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAAACTAATGTCATA	-14	True	NA	NA	False	NA	NA	NA	92245920	92235578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426_92245596_92245789
transcript_166914.known	chr7	-	665	3	ISM	ENSG00000001631.17	ENST00000452773.6	324	4	11	-21	-1	21	intron_retention	FALSE	canonical	0	0	junction_2	52	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCAACAGTGAAATAAC	-9	True	NA	NA	False	AAAAAG	-31	NA	92245915	92241080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92241153_92242033_92242138_92245426
transcript_166916.known	chr7	-	4369	24	FSM	ENSG00000127980.16	ENST00000248633.9	4369	24	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_14	23.583900823906	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTATCTGTTCTTTGT	-27	True	NA	-7	True	AATAAA	-20	NA	92528520	92487024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_166917.known	chr7	-	4051	24	FSM	ENSG00000127980.16	ENST00000484913.5	4051	24	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_21	38.5015159400073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGAGATTAATACTGTA	-1	True	NA	NA	False	TATAAA	-39	NA	92528439	92487296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518959_92519079_92522101_92522246_92528306
transcript_166923.known	chr7	-	3329	21	FSM	ENSG00000127980.16	ENST00000438045.5	3329	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	42.4832614096423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTTCTTTGTATATC	-3	True	NA	-2	True	AATAAA	-25	NA	92528441	92487019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92522101_92522246_92528306
transcript_166924.known	chr7	+	1716	6	FSM	ENSG00000157259.8	ENST00000645746.1	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	55.5027927225288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCAGCCTGGGCAA	29	True	NA	NA	False	NA	NA	NA	92447502	92457119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92447979_92448751_92448878_92449091_92449214_92450700_92450761_92454501_92454686_92456371
transcript_166927.known	chr7	+	4571	5	FSM	ENSG00000157259.8	ENST00000287957.5	4571	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	13.2759180473518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAACCATTCCAGTTCC	8	True	NA	NA	False	AATAAA	-29	NA	92447481	92460075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92447979_92448751_92448878_92450700_92450761_92454501_92454686_92456371
transcript_16693.known	chr1	+	3336	17	FSM	ENSG00000117593.12	ENST00000649689.2	3336	17	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	27.973131640022	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTTTTTTTTAG	7	True	NA	25	True	ATTAAA	-41	NA	173824672	173858546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_166935.known	chr7	+	4667	5	FSM	ENSG00000127993.16	ENST00000265732.10	4667	5	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_3	31.2759891929896	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACATAAAAAATTATTTA	1	True	NA	NA	False	AATAAA	-26	NA	92528794	92540481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536850
transcript_166938.known	chr7	-	2367	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	221.763026674872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTTACAAAGATAAAC	1	True	NA	19	True	NA	NA	NA	92590390	92560757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_166940.known	chr7	-	1890	11	FSM	ENSG00000234545.8	ENST00000415397.6	1890	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	235.727066753057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAGAATCTTAGTAAAT	79	False	NA	-127	True	NA	NA	NA	92590329	92561136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577677_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_166949.known	chr7	-	11612	8	FSM	ENSG00000105810.10	ENST00000265734.8	11612	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	14.2771402841703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTTTCTTTCTTT	3165	False	NA	-1	True	ATTAAA	-19	NA	92833917	92604920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92833872
transcript_166950.known	chr7	-	11663	8	FSM	ENSG00000105810.10	ENST00000424848.3	11663	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	12.5128505374047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTTTCTTTCTTT	8	True	NA	-1	True	ATTAAA	-19	NA	92836573	92604920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92836477
transcript_166954.nic	chr7	-	2360	7	ISM	ENSG00000105810.10	ENST00000265734.8	11612	8	-97	9531	-97	262	intron_retention	FALSE	canonical	3	39	junction_5	7.81913607049327	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGTATATTTTAAGAGA	3068	False	NA	16	True	AGTAAA	-39	NA	92834014	92614451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090
transcript_166962.known	chr7	+	5684	28	FSM	ENSG00000004766.17	ENST00000305866.10	5684	28	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	6.61834338303797	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATTGATGAATACAAG	-11	True	NA	NA	False	AATAAA	-15	NA	93232365	93361123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_166967.known	chr7	-	3572	14	FSM	ENSG00000004948.16	ENST00000426151.7	3572	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	10.3597994086267	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCGTCTCCTGCTCA	2	True	NA	-4	True	AATATA	-20	NA	93574724	93424485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93574691
transcript_166971.known	chr7	-	2207	5	FSM	ENSG00000105825.14	ENST00000222543.11	2207	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	6.20483682299543	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTAAGCATTCAAACC	-1	True	NA	NA	False	AATAAA	-13	NA	93890753	93885395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_93886897_93887260_93887432_93889034_93889224_93890136_93890320_93890590
transcript_166977.known	chr7	+	3019	2	FSM	ENSG00000127920.6	ENST00000248564.6	3019	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTGAGACTTAGGT	-3	True	NA	NA	False	ATTAAA	-16	NA	93921734	93928610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_93922234_93926090
transcript_166978.known	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	43.2897216438267	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	2	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
transcript_166980.known	chr7	+	5072	52	FSM	ENSG00000164692.19	ENST00000297268.11	5072	52	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.262569106984	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGAGTAAAATTCCTT	0	True	NA	32	True	AATAAA	-45	NA	94394894	94431227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
transcript_166994.known	chr7	+	4523	52	NNC	ENSG00000164692.19	novel	5072	52	NA	NA	19	15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	98.262569106984	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGTGGCTTTTGAAT	19	False	NA	21	True	AATAAA	-31	NA	94394913	94430703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_94395102_94398373_94398379_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
transcript_166997.known	chr7	-	1686	12	FSM	ENSG00000127990.19	ENST00000646559.1	1686	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	84.0679575557971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTGATCTTTAAAATAA	3	True	NA	-55	True	AAAACA	-27	NA	94656173	94585263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94644605_94644668_94655989
transcript_166998.known	chr7	-	1830	11	FSM	ENSG00000127990.19	ENST00000642759.1	1830	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.105043523583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAAAACATTGATGACT	-11	True	NA	-92	True	NA	NA	NA	94656187	94585300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94597748_94598005_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_166999.known	chr7	-	1868	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	28.6986062379343	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGATTGTGAAACTG	-13	True	NA	NA	False	AATAAA	-6	NA	94656133	94584979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_167001.known	chr7	-	1532	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	61.9876530915832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCCTAATGACTGG	-1	True	NA	-28	True	AATAAA	-26	NA	94656177	94585236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
transcript_167002.known	chr7	-	1672	10	FSM	ENSG00000127990.19	ENST00000447873.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	70.6956614171611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-3	True	NA	-14	True	AATAAA	-40	NA	94656207	94585222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_167004.known	chr7	-	1566	11	FSM	ENSG00000127990.19	ENST00000646098.1	1566	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	70.4369221360502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATGACTTTATATT	7	True	NA	-85	True	NA	NA	NA	94656169	94585293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618933_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_167005.known	chr7	-	1733	12	FSM	ENSG00000127990.19	ENST00000646489.1	1733	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	83.90303336748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGACTGGTGAAATT	-20	True	NA	-21	True	AATAAA	-33	NA	94656140	94585229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94655989
transcript_167006.known	chr7	-	1713	12	FSM	ENSG00000127990.19	ENST00000644551.1	1713	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	86.7837628108122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAAAGTTGATCTTTAA	-10	True	NA	-60	True	AAAACA	-22	NA	94656186	94585268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94622545_94622627_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_167007.known	chr7	+	3931	18	FSM	ENSG00000127995.17	ENST00000297273.9	3931	18	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_9	29.8983282910947	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGATCCATTCATGATT	-31	True	NA	39	True	ATTAAA	-24	NA	94509808	94557019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94510218_94517559_94517657_94518202_94518324_94527161_94527207_94528187_94528251_94533204_94533250_94533678_94533803_94535308_94535524_94537471_94537895_94538966_94539057_94544410_94544531_94545544_94545702_94547095_94547176_94549532_94549635_94551337_94551479_94552349_94552428_94554482_94554576_94555491
transcript_167009.known	chr7	+	6394	2	FSM	ENSG00000242265.6	ENST00000615790.5	6394	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCCTGATCATTT	176	False	NA	27	True	AATAAA	-30	NA	94656545	94669692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94656581_94663333
transcript_167010.known	chr7	+	2587	2	FSM	ENSG00000242265.6	ENST00000488574.5	2587	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCTGCCCTCAAA	0	True	NA	NA	False	NA	NA	NA	94656369	94665698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94656592_94663333
transcript_167021.known	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	125.903174602549	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	186	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_167024.known	chr7	-	1876	9	FSM	ENSG00000105854.13	ENST00000633192.1	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_6	73.0529559634653	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGGAGTTATATTAAAGA	55	False	NA	NA	False	ATTAAA	-2	NA	95435329	95404896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_167025.known	chr7	-	1515	9	FSM	ENSG00000105854.13	ENST00000455123.5	1515	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	151.016348452742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTTTTGTCTGTGTTT	12	True	NA	NA	False	ATTAAA	-32	NA	95434991	95404866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409953_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_167027.known	chr7	-	3192	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_9	111.549576236208	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTTGTTTGGTCTTGT	4628	False	NA	-4	True	AATAAA	-15	NA	96322147	96120220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_16703.known	chr1	+	3057	16	FSM	ENSG00000117593.12	ENST00000648807.1	3057	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	66.3821930607565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	-13	True	NA	-12	True	GATAAA	-5	NA	173824652	173858400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_167036.known	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7433	junction_1	388.5	904	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	NA	False	NA	NA	False	AATACA	-19	NA	96709891	96687950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_96688967_96694797_96694892_96709687
transcript_167037.nic	chr7	+	1098	3	NIC	ENSG00000196636.8	novel	774	2	NA	NA	-6	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	81	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAATACGTTTCCTCCAG	-5	True	NA	10	True	AATAAA	-10	NA	97117691	97181757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_97117898_97142672_97142819_97181011
transcript_167038.known	chr7	+	731	3	FSM	ENSG00000196636.8	ENST00000360382.4	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCATATTAGTCTTCT	-1	True	NA	NA	False	TTTAAA	-13	NA	97117722	97181487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_97117898_97136387_97136468_97181011
transcript_167039.known	chr7	+	952	2	FSM	ENSG00000196636.8	ENST00000432641.3	952	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	1	True	NA	16	True	AATAAA	-16	NA	97117697	97181763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_97117898_97181011
transcript_16704.known	chr1	+	3209	16	FSM	ENSG00000117593.12	ENST00000647645.1	3209	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	67.5266531740533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAGTAAAAGTCATTTT	6	False	NA	-4	True	ATTAAA	-12	NA	173824707	173858517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_167040.known	chr7	+	1061	7	FSM	ENSG00000006128.12	ENST00000319273.10	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.3748384988657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCACATGTCTTT	1	True	NA	14	True	AATAAA	-18	NA	97732085	97740472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97736298_97736353_97739873
transcript_167041.known	chr7	+	1011	6	FSM	ENSG00000006128.12	ENST00000346867.4	1011	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.5861986863682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGATTTTTGTCACA	-1	True	NA	7	True	AATAAA	-11	NA	97732083	97740465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734825_97734850_97736298_97736353_97739873
transcript_167054.known	chr7	-	2059	12	FSM	ENSG00000284707.2	ENST00000641315.1	2059	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	184.275978802546	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAACCATTGCTGTAG	20	True	NA	-22	True	AATAAA	-8	NA	97928411	97852135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869077_97928081
transcript_167056.known	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	160.579592587463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	15	True	NA	-90	True	NA	NA	NA	97872436	97852203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
transcript_167057.known	chr7	-	2385	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_10	67.7390315024424	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTTGTGGACCTC	0	True	NA	NA	False	AATAAA	-18	NA	97872408	97851676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
transcript_167058.known	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	189.695967273951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	57	False	NA	-38	True	NA	NA	NA	97872394	97852151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
transcript_167059.known	chr7	-	698	3	FSM	ENSG00000070669.17	ENST00000462436.1	698	3	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_2	35.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	97858379	97854990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97855460_97856689_97856817_97858277
transcript_167060.nnic	chr7	-	941	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-96	-287	multi-exon	FALSE	canonical	3	82	junction_1	34.4770455037358	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCTTTCTCTAAAAT	-20	True	NA	30	True	NA	NA	NA	97972350	97966376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_167061.nnic	chr7	-	721	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-96	-507	multi-exon	FALSE	canonical	3	82	junction_1	34.4770455037358	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTAGTTTTGTTGTCT	-20	True	NA	-19	True	NA	NA	NA	97972350	97966596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_167063.known	chr7	+	8974	14	FSM	ENSG00000164715.6	ENST00000297293.6	8974	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_13	7.63207184911536	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCGCGTTTCTTCTGTG	-3	True	NA	NA	False	AATAAA	-26	NA	98106861	98209638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98107281_98137314_98137443_98141396_98141542_98151381_98151456_98154757_98154877_98159337_98159426_98171540_98171675_98185050_98185136_98186876_98186999_98190727_98190878_98191613_98194573_98203573_98203707_98203943_98204187_98205463
transcript_167066.known	chr7	-	6545	26	FSM	ENSG00000205356.10	ENST00000447648.7	6545	26	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_22	5.96040267096108	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCAGCCGGAAACAAGAG	-35	True	NA	NA	False	NA	NA	NA	98252232	98214623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_98217504_98217691_98217812_98217935_98218043_98221660_98221754_98222385_98222522_98222989_98223171_98223661_98223719_98224800_98224881_98225005_98225103_98228013_98228117_98229038_98229167_98230960_98231119_98231223_98231374_98231803_98231960_98232826_98232973_98233420_98233912_98236775_98236922_98238508_98238611_98240850_98240952_98241069_98241245_98243466_98243593_98244570_98244694_98244884_98245068_98245921_98246166_98251393_98251549_98252125
transcript_167086.known	chr7	+	3262	2	FSM	ENSG00000180535.4	ENST00000609256.2	3262	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGGAACCACGCGTTTT	-14	True	NA	28	True	AATAAA	-30	NA	98211438	98215457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98211499_98212255
transcript_167089.known	chr7	-	3645	14	FSM	ENSG00000006453.14	ENST00000005260.9	3645	14	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_10	18.1551498879966	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGAGCTGTAAGCGC	-2	True	NA	-8	True	AATAAA	-17	NA	98401090	98291649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_98293597_98294073_98294112_98304195_98304377_98306438_98306517_98307688_98307897_98310444_98310593_98312096_98312265_98315459_98315613_98317218_98317357_98320057_98320130_98320236_98320299_98355041_98355129_98362356_98362433_98400801
transcript_1671.known	chr1	+	1404	7	FSM	ENSG00000157916.20	ENST00000378512.5	1404	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	414.364841923422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGATTATTTTGAC	45	False	NA	27	True	TATAAA	-18	NA	2391889	2403751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402096_2402343_2403034
transcript_167101.nic	chr7	-	2913	11	ISM	ENSG00000006453.14	ENST00000005260.9	3645	14	-28	13383	-28	-837	5prime_fragment	FALSE	canonical	3	209	junction_7	18.2032964047724	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCGTGGTGGCAG	-30	True	NA	NA	False	ACTAAA	-36	NA	98401118	98305032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_98306517_98307688_98307897_98310444_98310593_98312096_98312265_98315459_98315613_98317218_98317357_98320057_98320130_98320236_98320299_98355041_98355129_98362356_98362433_98400801
transcript_167107.nnic	chr7	+	571	3	NNC	ENSG00000164713.10	novel	790	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	94	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	4	True	NA	17	True	AATAAA	-17	NA	98281685	98291524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_98281740_98282350_98282454_98291110
transcript_167108.known	chr7	+	790	3	FSM	ENSG00000164713.10	ENST00000297290.4	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	23	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCTTTCAGAGACCCAG	4	True	NA	38	True	AATAAA	-38	NA	98281685	98291545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98281938_98282350_98282454_98291110
transcript_167109.known	chr7	+	2713	5	FSM	ENSG00000106236.4	ENST00000265634.4	2713	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	1.4790199457749	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTGTTTGTCTTCCTC	0	True	NA	13	True	ATTAAA	-16	NA	98617284	98629869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98617888_98619642_98619860_98624921_98625167_98627164_98627345_98628401
transcript_167112.known	chr7	-	2991	8	FSM	ENSG00000166448.15	ENST00000339375.9	2991	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.72486047691187	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGTGGCCAGAGTCTC	0	True	NA	NA	False	AATAAA	-31	NA	98870014	98846489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_98848209_98848582_98848696_98851420_98851624_98855239_98855325_98856016_98856184_98860178_98860339_98863094_98863401_98869776
transcript_167117.known	chr7	-	5737	19	FSM	ENSG00000198742.10	ENST00000361125.1	5737	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	68.0948186060265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGGCGTCTGTTAT	23	True	NA	-18	True	AATAAA	-12	NA	99144100	99027440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99050914_99050993_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_167120.nnic	chr7	-	2807	18	NNC	ENSG00000198742.10	novel	5668	18	NA	NA	-20	-2871	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	32.1871688849835	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATATTCTGCTGTGTTG	-5	True	NA	-6	True	AATAAA	-35	NA	99144128	99030311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_99030684_99033036_99033113_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_167121.known	chr7	-	5668	18	FSM	ENSG00000198742.10	ENST00000361368.7	5668	18	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_2	24.3926927625388	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGGCGTCTGTTATT	15	True	NA	-17	True	AATAAA	-13	NA	99144108	99027439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_167131.known	chr7	+	1509	11	FSM	ENSG00000130429.15	ENST00000431816.6	1509	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	290.760107304974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	0	True	NA	NA	False	NA	NA	NA	99374729	99394712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_167133.known	chr7	+	1582	10	FSM	ENSG00000241685.10	ENST00000262942.10	1582	10	0	0	0	0	multi-exon	TRUE	canonical	3	807	junction_7	76.5024005110338	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTGTTTCCTTGT	-15	True	NA	18	True	AATAAA	-15	NA	99325897	99366262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358416_99359544_99359739_99363542_99363634_99365890
transcript_167136.known	chr7	+	1511	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	41.8678107888019	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	0	True	NA	NA	False	AAAAAG	-15	NA	99374729	99394816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_167150.known	chr7	+	785	6	FSM	ENSG00000130429.15	ENST00000484375.5	785	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	300.390812109825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGAGGCCATCCCCAG	-3	True	NA	NA	False	NA	NA	NA	99374706	99391100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390903
transcript_167154.known	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_5	94.3046128246121	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-11	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
transcript_167156.known	chr7	+	582	5	FSM	ENSG00000130429.15	ENST00000484600.6	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	55.9039354607527	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGAGGGCGGGGCTGACG	0	True	NA	NA	False	NA	NA	NA	99374729	99390029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904
transcript_16716.known	chr1	+	1793	14	FSM	ENSG00000117593.12	ENST00000648458.1	1793	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	68.9648740023053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTGGTGTTTCAT	-10	True	NA	NA	False	ATTAAA	-19	NA	173824959	173852014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173851835
transcript_167165.known	chr7	+	1516	10	FSM	ENSG00000241685.10	ENST00000432786.5	1516	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	300.36475767693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCACTAGAAAATTAAATA	14	True	NA	-18	True	NA	NA	NA	99325926	99366226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358404_99359533_99359739_99363542_99363634_99365890
transcript_167166.known	chr7	+	1556	11	FSM	ENSG00000130429.15	ENST00000455009.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	293.949655553464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCATGAACTGCTTCAAAA	-3	True	NA	NA	False	NA	NA	NA	99374706	99394732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99377333_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_16718.known	chr1	-	632	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	91	0	0	multi-exon	FALSE	canonical	3	1580	junction_11	440.04686076533	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	0	True	NA	-12	True	AATAAA	-14	NA	173867987	173863900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_167192.known	chr7	+	1823	8	FSM	ENSG00000160917.15	ENST00000292476.10	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_6	203.662686312241	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTCTCATTAATTAAG	-8	True	NA	27	True	ATTAAA	-14	NA	99438942	99457373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431
transcript_167195.known	chr7	+	1738	8	FSM	ENSG00000160917.15	ENST00000436336.6	1738	8	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_6	182.726962589386	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATGGATTAAAGC	-29	True	NA	-4	True	NA	NA	NA	99438921	99457342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_16720.known	chr1	-	1007	12	FSM	ENSG00000234741.9	ENST00000451607.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	928.299013169377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTACAGCCTCAAACTTC	258	False	NA	NA	False	NA	NA	NA	173867729	173864033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867154
transcript_167203.known	chr7	+	942	8	FSM	ENSG00000160917.15	ENST00000441580.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	342.556654036219	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGAGCTGGCCCGCAGA	-35	True	NA	NA	False	NA	NA	NA	99439375	99456589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99439597_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_16721.nic	chr1	-	609	12	FSM	ENSG00000234741.9	ENST00000689238.1	607	12	-8	6	-8	0	multi-exon	FALSE	canonical	3	1286	junction_5	594.739181671156	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	NA	False	NA	-12	True	AATAAA	-14	NA	173868003	173863900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_167219.known	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	296.229370589751	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	16	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_167224.known	chr7	-	443	4	FSM	ENSG00000241468.8	ENST00000292475.8	443	4	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_3	1992.21200344408	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	0	True	NA	-36	True	AATAAA	-13	NA	99466167	99458194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466110
transcript_167225.known	chr7	-	323	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	817	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	3	True	NA	-36	True	AATAAA	-13	NA	99466164	99458194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99460085_99460194_99466110
transcript_167227.known	chr7	-	584	2	FSM	ENSG00000241468.8	ENST00000524321.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGGATTGCTTGAGC	3	True	NA	NA	False	NA	NA	NA	99466164	99459663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99460194_99466110
transcript_167228.known	chr7	-	5464	8	FSM	ENSG00000106246.18	ENST00000292478.9	5464	8	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	13.5526185435788	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-36	True	NA	NA	False	NA	NA	NA	99438798	99416738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438691
transcript_167229.known	chr7	+	1139	6	FSM	ENSG00000106245.11	ENST00000403633.6	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_1	254.984234806782	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	14	True	NA	17	True	AATAAA	-18	NA	99408640	99419616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99409005_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_167230.known	chr7	-	460	4	FSM	ENSG00000241468.8	ENST00000449683.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2967.96574553459	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGATTGCCTGCCTGTCTG	0	True	NA	-31	True	AATAAA	-18	NA	99466167	99458189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460224_99466128
transcript_167231.known	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	1859	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	0	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99460085_99460194_99466128
transcript_167232.known	chr7	+	1055	7	FSM	ENSG00000198556.14	ENST00000448667.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	10.6874796945876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGTCTTATGAATGCA	1	True	NA	NA	False	NA	NA	NA	99472889	99486800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660_99479788_99484029_99484144_99485207_99485369_99486475
transcript_167233.known	chr7	+	5083	7	FSM	ENSG00000196652.12	ENST00000326775.10	5083	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.3776282653032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTGGAGAGATGGTA	-1	True	NA	NA	False	NA	NA	NA	99504661	99534700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99504734_99506004_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_167235.known	chr7	+	4344	7	FSM	ENSG00000196652.12	ENST00000394170.6	4344	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	28.852594722524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTCTGAATCCCTGTC	287	False	NA	10	True	AATAAA	-16	NA	99504949	99533822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99505161_99506004_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_167245.known	chr7	+	1616	5	FSM	ENSG00000198556.14	ENST00000331410.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	12.7744862910412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTTGTGTAGCCAAT	1	True	NA	14	True	AATAAA	-26	NA	99472889	99487605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99484029_99484144_99486475
transcript_167247.nnic	chr7	+	2975	5	NIC	ENSG00000196652.12	novel	4344	7	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	29.2831009286926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTGTTTTGGTACCT	294	False	NA	9	True	AGTAAA	-15	NA	99504956	99532679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_99505161_99506004_99506459_99512452_99512592_99525812_99526419_99531107
transcript_167252.known	chr7	+	5626	5	FSM	ENSG00000196652.12	ENST00000454175.1	5626	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	31.1608729017658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTGGAGAGATGGTA	-3	True	NA	NA	False	NA	NA	NA	99505253	99534700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99506459_99512452_99512592_99519826_99519910_99525812_99526419_99531107
transcript_167254.known	chr7	+	2994	4	FSM	ENSG00000198556.14	ENST00000483089.5	2994	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	11.5758369027902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	1	True	NA	NA	False	AATAAA	-21	NA	99472889	99482326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660
transcript_167255.known	chr7	+	510	4	FSM	ENSG00000198556.14	ENST00000379724.3	510	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	12.4988888395018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	0	True	NA	NA	False	AATAAA	-17	NA	99472911	99482322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99482162
transcript_167259.nnic	chr7	+	4322	4	NIC	ENSG00000196652.12	novel	5626	5	NA	NA	-22	-365	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	26.2339898266013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTGTACACTGTGGT	248	False	NA	25	True	AATAAA	-25	NA	99505231	99533457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_99506459_99512452_99512592_99525812_99526419_99531107
transcript_167262.known	chr7	+	1884	3	FSM	ENSG00000198556.14	ENST00000488485.5	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCATGAATTTTT	3	True	NA	NA	False	AATAGA	-12	NA	99472891	99481301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99479660
transcript_167264.known	chr7	-	2163	3	FSM	ENSG00000160908.15	ENST00000337673.7	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	4	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGACTTGGCCTGTT	-5	True	NA	-8	True	AATAAA	-22	NA	99500281	99493239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99494632_99498715_99498843_99499637
transcript_167266.known	chr7	-	2017	2	FSM	ENSG00000160908.15	ENST00000426306.2	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATGTGACTTGGCCTG	12	True	NA	-10	True	AATAAA	-20	NA	99500264	99493241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99494632_99499637
transcript_167268.known	chr7	-	325	2	FSM	ENSG00000160908.15	ENST00000464401.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTCTGTACTGCTAG	572	False	NA	-104	True	NA	NA	NA	99499704	99498584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99498843_99499637
transcript_16727.known	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	67	junction_4	917.109677192428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-2	True	NA	-11	True	AATAAA	-15	NA	173867989	173863899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_167271.known	chr7	+	1601	5	FSM	ENSG00000197343.11	ENST00000320583.9	1601	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	59.1623824740012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	5	True	NA	21	True	NA	NA	NA	99558405	99564705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99562367_99562495_99563862
transcript_167273.known	chr7	+	1815	4	FSM	ENSG00000197343.11	ENST00000493277.5	1815	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	52.1685303181483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCACACCAGAGAGAAAC	-3	True	NA	NA	False	NA	NA	NA	99558717	99573721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99571687_99571793_99572244
transcript_167274.known	chr7	+	545	3	FSM	ENSG00000197343.11	ENST00000452314.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	64.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCTGCTCGGAAACTCC	13	True	NA	NA	False	NA	NA	NA	99558566	99564023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99563862
transcript_167275.known	chr7	+	4518	3	FSM	ENSG00000197343.11	ENST00000252713.9	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	44	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTCAAACAAAATCTG	-16	True	NA	23	True	AATAAA	-23	NA	99558641	99576453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99572244
transcript_167278.known	chr7	-	2468	2	FSM	ENSG00000221909.3	ENST00000449309.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTTCTACATAGTA	-2	True	NA	-16	True	AATAAA	-20	NA	99552114	99546299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99548507_99551853
transcript_167279.known	chr7	+	1198	3	FSM	ENSG00000197343.11	ENST00000440391.5	1198	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	-24	True	NA	21	True	NA	NA	NA	99558825	99564705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99559018_99560532_99560696_99563862
transcript_167285.known	chr7	+	2823	8	FSM	ENSG00000197037.11	ENST00000394150.5	2823	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	26.9784494494009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTAGTATTAATGCCCT	-10	True	NA	NA	False	ATTAAA	-17	NA	99616947	99630904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99616990_99618524_99618652_99619047_99619133_99619560_99619998_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_167289.known	chr7	+	4352	8	FSM	ENSG00000197037.11	ENST00000394152.7	4352	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	11.8528391501095	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTCTGTCCACTCCT	-12	True	NA	NA	False	TATAAA	-17	NA	99616945	99632408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_167301.known	chr7	+	558	4	FSM	ENSG00000197037.11	ENST00000493443.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	30.3021818063027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCGTCAGGCACCAGCG	-5	True	NA	NA	False	NA	NA	NA	99616952	99629468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99617017_99622548_99622641_99624056_99624181_99629190
transcript_167303.known	chr7	-	3314	6	FSM	ENSG00000146833.16	ENST00000349062.7	3314	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	11.6206712370672	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGAATGATGTCTTTGG	-7	True	NA	-6	True	AATATA	-19	NA	99919530	99890402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99892747_99903217_99903316_99903575_99903599_99908581_99908813_99909564_99909661_99919008
transcript_167306.known	chr7	-	1119	2	FSM	ENSG00000176402.6	ENST00000312891.3	1119	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	4631	False	NA	0	True	AATAAA	-20	NA	99929620	99923265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99923604_99928839
transcript_167309.known	chr7	+	9403	6	FSM	ENSG00000106261.17	ENST00000324306.11	9403	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	13.7753402861781	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	-6	True	NA	26	True	AATAAA	-20	NA	100015595	100041689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
transcript_167312.nnic	chr7	+	1825	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	0	3877	intron_retention	FALSE	canonical	1	2	junction_5	27.3978101314685	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCAGCATGGTGGCGTG	NA	False	NA	NA	False	NA	NA	NA	100015571	100045566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100044783
transcript_167313.nnic	chr7	+	5204	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	0	2470	intron_retention	FALSE	canonical	3	9	junction_5	24.8354585220406	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAAGTGAGGTGTGGAA	NA	False	NA	NA	False	AAAAAG	-12	NA	100015571	100036741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100031101_100033304
transcript_167314.known	chr7	+	8758	4	FSM	ENSG00000106261.17	ENST00000535170.5	8758	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5809320861155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTTGTGCTGGTTTGTT	NA	False	NA	25	True	AATAAA	-19	NA	100015571	100041688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100015727_100029860_100029953_100030248_100030376_100033304
transcript_167316.known	chr7	+	1449	3	FSM	ENSG00000106261.17	ENST00000482979.5	1449	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTTTTTGTTTTTAG	-3	True	NA	NA	False	ATTAAA	-30	NA	100015598	100024960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100015727_100023418_100023933_100024153
transcript_167327.known	chr7	-	1441	6	FSM	ENSG00000166526.18	ENST00000413658.6	1441	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	78.4561023757872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATATAACGTCTCTCTC	-4	True	NA	NA	False	ACTAAA	-19	NA	100081727	100064032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100064913_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_167331.known	chr7	-	2797	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	28.7304716285689	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGTGGTTTTGTGC	0	True	NA	-2	True	ATTAAA	-21	NA	100081723	100069972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_167332.known	chr7	-	999	6	FSM	ENSG00000166526.18	ENST00000428683.5	999	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	74.0043241979818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	7498	False	NA	NA	False	AATATA	-32	NA	100082548	100071929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100082300
transcript_167333.nic	chr7	-	2710	6	NIC	ENSG00000166526.18	novel	2797	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	77.1948184789627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	-3	True	NA	5	True	NA	NA	NA	100081766	100070176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100072213_100075134_100075262_100075541_100075631_100077228_100077434_100079535_100079657_100081634
transcript_167336.nnic	chr7	+	2247	5	NNC	ENSG00000166529.16	novel	2009	4	NA	NA	-32	-1	intron_retention	FALSE	canonical	2	6	junction_2	66.3117636622643	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCTCAGGACTATTAT	9743	False	NA	6	True	AATAAA	-15	NA	100049741	100065037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100049842_100050627_100050837_100056910_100057406_100057697_100057891_100063787
transcript_167338.nic	chr7	+	2141	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	34	junction_1	47.9915357120399	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCTCAGGACTATTAT	-5	True	NA	6	True	AATAAA	-15	NA	100049771	100065037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
transcript_167341.known	chr7	+	1870	5	NNC	ENSG00000166529.16	novel	2009	4	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	58.8700900288083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCTCAGGACTATTAT	-1	True	NA	6	True	AATAAA	-15	NA	100049798	100065037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100049842_100056910_100057277_100057387_100057406_100057697_100057891_100063787
transcript_167342.known	chr7	+	1904	5	FSM	ENSG00000166529.16	ENST00000456748.6	1904	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	53.5933764564242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	-3	True	NA	7	True	AATAAA	-16	NA	100049773	100065038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787_100063980_100064082
transcript_167345.known	chr7	-	735	5	FSM	ENSG00000166526.18	ENST00000449785.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	75.2927619363243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	-16	True	NA	NA	False	AATATA	-32	NA	100081739	100071929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100081634
transcript_167350.known	chr7	-	574	5	FSM	ENSG00000166526.18	ENST00000441298.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	86.6775634175304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAAAGGCCGCTGGGGA	-15	True	NA	NA	False	TTTAAA	-24	NA	100081738	100072079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100079535_100079657_100081634
transcript_167352.known	chr7	+	2009	4	FSM	ENSG00000166529.16	ENST00000292450.9	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	37.7977071615021	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	-3	True	NA	9	True	AATAAA	-18	NA	100049773	100065040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787
transcript_167354.nnic	chr7	+	3003	4	NNC	ENSG00000166529.16	novel	2009	4	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	6	junction_1	63.8035178410163	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCTCAGGACTATTAT	-5	True	NA	6	True	AATAAA	-15	NA	100049771	100065037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100050837_100056910_100057406_100057697_100057891_100063787
transcript_167356.known	chr7	-	2545	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	89.25743044077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-19	True	NA	-21	True	ATTAAA	-2	NA	100081742	100069991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
transcript_167361.known	chr7	-	640	3	FSM	ENSG00000166526.18	ENST00000479192.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGCAACCTCCGCCTC	-14	True	NA	NA	False	NA	NA	NA	100081737	100077017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100077434_100079535_100079657_100081634
transcript_167363.known	chr7	+	1107	10	FSM	ENSG00000168090.10	ENST00000418625.5	1107	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	776.145604896401	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTGGTGGCTCTGTC	3	True	NA	16	True	AATAAA	-21	NA	100088980	100091905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100089067_100089292_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
transcript_167380.known	chr7	+	835	3	FSM	ENSG00000168090.10	ENST00000472107.5	835	3	0	0	0	0	multi-exon	FALSE	canonical	3	2275	junction_1	192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGATGCTGAGGCAGGAG	4	True	NA	NA	False	AATACA	-45	NA	100088981	100090238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100089067_100089289_100089416_100089614
transcript_167381.known	chr7	+	1171	2	FSM	ENSG00000168090.10	ENST00000465027.1	1171	2	0	0	0	0	multi-exon	FALSE	canonical	3	2275	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTACTATATGTTCTG	-9	True	NA	NA	False	NA	NA	NA	100088968	100090362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100089067_100089289
transcript_1674.known	chr1	+	3028	7	FSM	ENSG00000157916.20	ENST00000605895.6	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_1	144.138436542405	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	-4	True	NA	24	True	AATAAA	-16	NA	2391840	2405436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_16740.known	chr1	-	979	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	2	0	0	multi-exon	FALSE	canonical	3	1580	junction_9	485.623793832018	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	0	True	NA	-12	True	AATAAA	-14	NA	173867987	173863900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_167413.known	chr7	+	3591	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	15.8539250274344	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTGTGGTGGTTCA	-2	True	NA	NA	False	AAAAAG	-3	NA	100101642	100109039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_167414.known	chr7	+	1836	15	FSM	ENSG00000221838.10	ENST00000429084.5	1836	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.5865409803069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTACGTGCACGT	-12	True	NA	43	True	NA	NA	NA	100101556	100107177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100101773_100101879_100101990_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_167430.known	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_11	148.78555997523	4055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-23	True	NA	-4	True	ATTAAA	-23	NA	100101397	100092727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
transcript_167447.known	chr7	-	2727	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_14	231.919991921915	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGATCCACTGCAGT	2	True	NA	-11	True	AATAAA	-13	NA	100119346	100107078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
transcript_167448.known	chr7	-	2424	15	FSM	ENSG00000106290.16	ENST00000453269.7	2424	15	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_14	73.3872868932421	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-10	True	NA	-2	True	AATAAA	-22	NA	100119358	100107069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119203
transcript_167450.known	chr7	-	2297	15	FSM	ENSG00000106290.16	ENST00000452041.5	2297	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_14	253.905705219196	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	-16	True	NA	-10	True	AATAAA	-14	NA	100119364	100107077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119328
transcript_167452.known	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	269.714399213051	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	9	True	NA	-42	True	NA	NA	NA	100119841	100107167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
transcript_167456.nic	chr7	-	2408	15	FSM	ENSG00000106290.16	ENST00000692408.1	2579	15	-31	202	-8	0	multi-exon	FALSE	canonical	3	258	junction_13	209.936251256987	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	7789	False	NA	-10	True	AATAAA	-14	NA	100119380	100107077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114083_100114269_100119203
transcript_167462.known	chr7	-	2685	15	FSM	ENSG00000106290.16	ENST00000421980.5	2685	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	341.271990395596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-11	True	NA	-2	True	AATAAA	-22	NA	100119359	100107069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113679_100113770_100113867_100113955_100114053_100114269_100118879
transcript_167490.nic	chr7	-	3123	14	NIC	ENSG00000166508.18	novel	2467	15	NA	NA	19	0	intron_retention	FALSE	canonical	3	1140	junction_11	141.709637293217	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	1	True	NA	-9	True	AATAAA	-18	NA	100101921	100092780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099754_100100013_100100094_100101263
transcript_167491.known	chr7	-	2900	14	FSM	ENSG00000166508.18	ENST00000485286.5	2900	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	382.444071016432	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	-19	True	NA	-9	True	AATAAA	-18	NA	100100757	100092780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100100212
transcript_167494.known	chr7	-	3084	14	FSM	ENSG00000166508.18	ENST00000621318.4	3084	14	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_11	140.297570485107	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTCGTTTTTAT	9888	False	NA	-5	True	ATTAAA	-22	NA	100101940	100092728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100101263
transcript_16751.known	chr1	-	1698	8	FSM	ENSG00000234741.9	ENST00000431268.5	1698	8	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_7	526.648936238189	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-2	True	NA	-12	True	AATAAA	-14	NA	173867989	173863900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866797_173866990_173867044_173867959
transcript_16754.known	chr1	-	632	8	FSM	ENSG00000234741.9	ENST00000690941.1	1443	8	0	811	0	289	multi-exon	FALSE	canonical	3	1580	junction_7	542.651013496685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCATGCCCCGCCTC	-2	True	NA	NA	False	NA	NA	NA	173867989	173864954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_167559.nic	chr7	-	3430	13	NIC	ENSG00000166508.18	novel	3084	14	NA	NA	-213	0	intron_retention	FALSE	canonical	3	1236	junction_11	128.601748519304	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	9847	False	NA	-9	True	AATAAA	-18	NA	100102153	100092780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099754_100100013_100100094_100101263
transcript_16761.known	chr1	-	1771	6	FSM	ENSG00000120334.16	ENST00000367710.7	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	26.7686383665662	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCGTTTATTATGTTTA	740	False	NA	NA	False	AATAAA	-21	NA	173824174	173799849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_16762.known	chr1	-	2706	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	9.8508882848198	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-4	True	NA	NA	False	ATTAAA	-19	NA	173824883	173799549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
transcript_167646.known	chr7	+	1478	6	FSM	ENSG00000166997.8	ENST00000262932.5	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	8.64869932417586	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGGCCCAAAGTTTC	-19	True	NA	33	True	ATTAAA	-23	NA	100119633	100125508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100119863_100122258_100122386_100122480_100122578_100122783_100122907_100124513_100124632_100124724
transcript_167663.known	chr7	+	1226	2	FSM	ENSG00000214309.5	ENST00000398075.4	1226	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTGCCCTAGTGTAAA	-1	True	NA	19	True	AATAAA	-21	NA	100126966	100128495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100127065_100127367
transcript_167664.known	chr7	+	1814	14	FSM	ENSG00000221838.10	ENST00000422582.5	1814	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	28.2669020495577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTTCCTTCCGCTT	117	False	NA	14	True	AAAAAG	-22	NA	100102060	100107148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100102394_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_167665.known	chr7	-	2551	14	FSM	ENSG00000106290.16	ENST00000472509.6	2551	14	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_11	61.1203101079527	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	5292	False	NA	-10	True	AATAAA	-14	NA	100114558	100107077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053
transcript_167666.known	chr7	+	1572	16	FSM	ENSG00000221838.10	ENST00000421755.5	1572	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	32.5817945075672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGACAGGGACCTAAGT	-21	True	NA	NA	False	AATAAA	-25	NA	100101663	100110319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657_100106913_100110190
transcript_167667.known	chr7	-	2555	11	FSM	ENSG00000146826.17	ENST00000316937.8	2555	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	10.8921990433521	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGATGACTAGTTTGTGT	-20	True	NA	-5	True	ATTAAA	-18	NA	100158723	100154422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100155165_100155261_100155456_100155670_100155826_100156385_100156550_100156633_100156717_100156844_100156993_100157093_100157215_100157372_100157460_100157632_100157763_100157842_100157939_100158088
transcript_16768.known	chr1	-	799	6	ISM	ENSG00000234741.9	ENST00000693469.1	1886	7	1	1267	-1	76	5prime_fragment	FALSE	canonical	3	1580	junction_5	584.273429140843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGCAGCGGCACTATC	-1	True	NA	NA	False	NA	NA	NA	173867988	173865167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173865548_173865856_173865895_173866176_173866207_173866527_173866797_173866990_173867044_173867959
transcript_167680.known	chr7	+	564	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	728.904657688507	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	12	True	NA	26	True	AATAAA	-21	NA	100148933	100154203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
transcript_167682.known	chr7	+	613	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	769.131111493136	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	18	True	NA	26	True	AATAAA	-21	NA	100148993	100154203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
transcript_167683.nnic	chr7	+	600	4	NNC	ENSG00000188186.11	novel	594	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	843.188525116945	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-6	True	NA	26	True	AATAAA	-21	NA	100148969	100154203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100149034_100149498_100149580_100153399_100153518_100153866
transcript_167686.known	chr7	+	730	3	FSM	ENSG00000188186.11	ENST00000441173.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_1	393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGATGAGGCAGGCACA	16	True	NA	NA	False	NA	NA	NA	100148937	100154010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100148976_100149498_100149580_100153399
transcript_167688.known	chr7	+	519	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	951.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-10	True	NA	26	True	AATAAA	-21	NA	100148911	100154203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100148976_100153399_100153518_100153866
transcript_167692.known	chr7	-	2405	4	FSM	ENSG00000197093.11	ENST00000360039.9	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7.54247233265651	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-11	True	NA	-3	True	AATAAA	-15	NA	100168617	100159243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100160960_100166501_100166806_100166970_100167284_100168545
transcript_167696.known	chr7	-	2546	10	FSM	ENSG00000213420.8	ENST00000292377.4	2546	10	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_7	16.478942792411	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATGTGTGGCTTCTGTG	-19	True	NA	-6	True	AATAAA	-16	NA	100177381	100169605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100170484_100171260_100171437_100171538_100171679_100171778_100171926_100172086_100172218_100173834_100173998_100174684_100174766_100175571_100175895_100176206_100176366_100177033
transcript_16770.known	chr1	+	2300	5	FSM	ENSG00000185278.15	ENST00000427304.5	2300	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.27760839478607	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAATACTGGTGG	-15	True	NA	NA	False	NA	NA	NA	173868354	173886636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173868406_173868924_173869121_173870196_173871149_173873466_173873567_173885635
transcript_167701.known	chr7	-	2129	4	FSM	ENSG00000213420.8	ENST00000471717.1	2129	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	20.8326666559997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	-10	True	NA	NA	False	NA	NA	NA	100177372	100173457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100174766_100175571_100175895_100176206_100176366_100177033
transcript_167708.known	chr7	+	4450	34	FSM	ENSG00000066923.18	ENST00000426455.5	4450	34	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	2.42575710256842	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTTCCCAAGGTGTGGC	NA	False	NA	22	True	AATAAA	-14	NA	100177562	100214380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100177906_100180492_100180673_100182089_100182193_100182722_100182840_100186199_100186297_100188452_100188530_100188811_100189017_100189444_100189597_100195308_100195383_100197155_100197280_100197777_100197877_100198086_100198167_100198474_100198583_100198842_100198958_100199261_100199368_100199540_100199645_100200235_100200329_100200452_100200543_100200768_100200970_100201089_100201161_100201263_100201352_100201785_100201867_100201948_100202042_100202171_100202341_100202453_100202591_100204020_100204123_100204626_100204776_100205004_100205134_100205226_100205385_100211010_100211186_100211437_100211540_100211794_100211877_100213734_100213807_100214006
transcript_167713.known	chr7	-	2840	6	FSM	ENSG00000239521.10	ENST00000543273.5	2840	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	39.8768103037342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTGATTTTTCTGGA	-8	True	NA	NA	False	ATTAAA	-27	NA	100272208	100200652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100202604_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_167714.known	chr7	-	2007	6	FSM	ENSG00000239521.10	ENST00000414739.3	2007	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	24.121359828998	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAACCTGTCCTCCTTT	-14	True	NA	-3	True	AATAAA	-29	NA	100272214	100212021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_167715.nic	chr7	-	1084	4	FSM	ENSG00000239521.10	ENST00000689058.1	856	4	-237	9	-43	-9	multi-exon	FALSE	canonical	3	105	junction_3	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTGGTGGTGC	NA	False	NA	-9	True	AATACA	-4	NA	100272261	100223303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100223699_100223881_100224076_100233603_100233675_100271837
transcript_16774.known	chr1	-	897	5	FSM	ENSG00000234741.9	ENST00000443799.5	897	5	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_4	652.269307878272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGTTGGGAAATCTTTT	-2	True	NA	-20	True	AAGAAA	-25	NA	173867989	173865352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173865548_173865856_173866207_173866527_173866797_173866990_173867044_173867959
transcript_16775.known	chr1	-	1060	3	FSM	ENSG00000234741.9	ENST00000421068.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_2	777.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGGTGATATGCTTA	0	True	NA	NA	False	AATGAA	-25	NA	173867987	173865817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173866797_173866990_173867044_173867959
transcript_16776.known	chr1	-	565	11	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	686	-133	2	0	3prime_fragment	FALSE	canonical	3	1286	junction_5	510.943059449876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	944	False	NA	-12	True	AATAAA	-14	NA	173867043	173863900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_16777.known	chr1	-	772	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2210	junction_4	266.391432035132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	944	False	NA	-12	True	AATAAA	-14	NA	173867043	173863900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_16778.known	chr1	-	688	12	FSM	ENSG00000234741.9	ENST00000454068.5	688	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	855.359815062141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATCCATCTGGAGTGT	172	False	NA	-22	True	AATAAA	-4	NA	173867815	173863910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867721
transcript_16779.known	chr1	-	643	3	FSM	ENSG00000234741.9	ENST00000422207.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	2781	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	3081	False	NA	-15	True	AATAAA	-11	NA	173864906	173863903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483
transcript_16780.known	chr1	-	11451	20	FSM	ENSG00000135870.12	ENST00000367696.7	11451	20	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	4.506074693264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGAGTAGCCAATTTT	0	True	NA	-1	True	AATAAA	-30	NA	174022357	173931083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173938872_173941264_173941381_173943441_173943616_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754_173993136_174022095
transcript_16789.nic	chr1	-	500	2	ISM	ENSG00000135870.12	ENST00000367696.7	11451	20	-181	61995	-181	-12130	5prime_fragment	FALSE	canonical	3	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAACTTTTTTTCAAAGA	NA	False	NA	17	True	TTTAAA	-10	NA	174022538	173993078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173993136_174022095
transcript_16790.known	chr1	-	10988	19	FSM	ENSG00000135870.12	ENST00000258349.8	10988	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	4.52155332208351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTATTTTGTAAATGA	NA	False	NA	-17	True	ATTAAA	-19	NA	173993064	173931213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173938872_173941264_173941381_173943441_173943616_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754
transcript_16792.known	chr1	+	6821	9	FSM	ENSG00000152061.24	ENST00000489615.5	6821	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	136.466513749711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCTTTTTTATTTTT	38	False	NA	19	True	AATAAA	-19	NA	174799931	174995308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174800501_174811831_174811961_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_167932.known	chr7	-	1244	7	FSM	ENSG00000078319.11	ENST00000675162.2	1822	7	0	578	0	0	multi-exon	FALSE	canonical	3	93	junction_1	72.6622705092234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	NA	False	NA	-5	True	AATAAA	-18	NA	100336307	100320913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_167933.known	chr7	-	788	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	4	-1	0	multi-exon	FALSE	canonical	3	13	junction_1	100.002799960801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	19	False	NA	-4	True	AATAAA	-19	NA	100335939	100320912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_167935.known	chr7	-	747	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	3	0	0	multi-exon	FALSE	canonical	3	130	junction_1	63.1778442177319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	8	True	NA	NA	False	ATTAAA	-18	NA	100335950	100325659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_167937.known	chr7	+	1255	6	FSM	ENSG00000242294.6	ENST00000473757.5	1255	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	68.4368321885226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTTGTGGGGGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	100336078	100351900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100345864_100345969_100349730_100349888_100351251
transcript_167939.known	chr7	-	537	5	FSM	ENSG00000078319.11	ENST00000675486.2	899	5	105	257	4	-149	multi-exon	FALSE	canonical	3	146	junction_1	53.9305108449753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	98	False	NA	NA	False	CATAAA	-25	NA	100335860	100328835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_16794.nic	chr1	+	1559	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	51.9230199429887	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	NA	False	NA	NA	False	NA	NA	NA	174874385	174990409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_167942.known	chr7	+	683	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	82.8666934835033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	1	True	NA	4	True	AATAAA	-15	NA	100336124	100341328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
transcript_167947.nic	chr7	+	3706	4	ISM	ENSG00000272752.6	ENST00000483329.6	819	7	-54	3113	-35	-3113	5prime_fragment	TRUE	canonical	3	126	junction_1	36.7786169759912	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGGTGGGTAGTCAA	NA	False	NA	NA	False	NA	NA	NA	100336068	100349098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864
transcript_167951.known	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	242	junction_3	24.3082062046727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	4	True	NA	-15	True	AATAAA	-21	NA	100335916	100329986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
transcript_167954.nnic	chr7	+	2978	5	NNC	ENSG00000146834.14	novel	2822	4	NA	NA	71	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.6659513557904	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	11	True	NA	27	True	AATAAA	-27	NA	100429445	100434118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100430832_100431060_100431690_100432918_100433138_100433262_100433390_100433501
transcript_167956.known	chr7	+	2822	4	FSM	ENSG00000146834.14	ENST00000310512.4	2822	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	17.2819751957543	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	-5	True	NA	27	True	AATAAA	-27	NA	100429830	100434118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100431690_100432918_100433138_100433262_100433390_100433501
transcript_167957.known	chr7	-	963	4	FSM	ENSG00000160813.7	ENST00000292330.3	963	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_3	121.369957842403	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-18	True	NA	-23	True	AATAAA	-18	NA	100436497	100435281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100435534_100435630_100435768_100435847_100436065_100436140
transcript_167958.known	chr7	-	942	3	FSM	ENSG00000160813.7	ENST00000491407.1	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_2	148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGATCCCTGGAGGG	6	True	NA	-40	True	NA	NA	NA	100436473	100435358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100435534_100435630_100436065_100436140
transcript_167959.nic	chr7	-	850	3	NIC	ENSG00000160813.7	novel	963	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	193	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTCTTCTTGGAGGC	170	False	NA	-24	True	AATAAA	-17	NA	100436522	100435282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100435534_100435847_100436065_100436140
transcript_167960.nic	chr7	-	1165	2	NIC	ENSG00000160813.7	novel	963	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	480	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	170	False	NA	-23	True	AATAAA	-18	NA	100436522	100435281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100436065_100436140
transcript_167961.known	chr7	-	474	2	FSM	ENSG00000160813.7	ENST00000476185.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTCTTCTTGGAGGC	622	False	NA	-24	True	AATAAA	-17	NA	100436070	100435282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100435534_100435847
transcript_167976.known	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	48.0884601541784	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	21	False	100479253	-30	True	ATTAAA	-19	NA	100479232	100466537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
transcript_167979.nnic	chr7	-	2465	5	NNC	ENSG00000166925.9	novel	2318	5	NA	NA	-232	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	57.1549429183513	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	NA	False	NA	-11	True	ATTAAA	-38	NA	100479464	100466518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478205_100478793
transcript_167980.known	chr7	-	2318	5	FSM	ENSG00000166925.9	ENST00000300181.7	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	22.7307610959246	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-24	True	NA	-11	True	ATTAAA	-38	NA	100479214	100466518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478308_100478793
transcript_167989.known	chr7	-	2060	3	FSM	ENSG00000166925.9	ENST00000493217.1	2060	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	23.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAAAAAT	21	True	NA	NA	False	AAAAAG	-6	NA	100479169	100473787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100474441_100477276_100478308_100478793
transcript_16799.nic	chr1	+	1705	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	86.8338031817103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	842	False	NA	NA	False	NA	NA	NA	174875446	174990409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_174875714_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_167990.known	chr7	+	3584	7	FSM	ENSG00000166924.9	ENST00000300179.7	3584	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.687184270936277	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTTCTTCTATTTCAC	-5	True	NA	17	True	ATTAAA	-18	NA	100483926	100494802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100484002_100485227_100485380_100486820_100487183_100488151_100489667_100490516_100490730_100490985_100491096_100493645
transcript_167997.known	chr7	+	4819	12	FSM	ENSG00000106351.13	ENST00000300176.9	4819	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	7.37765220555399	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAAGCCTCAGGGAGTA	-20	True	NA	NA	False	AATAAA	-18	NA	100539202	100568220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100539568_100548821_100548916_100550395_100550512_100553346_100553501_100554092_100554259_100555609_100555736_100562258_100562380_100562593_100562683_100562862_100562947_100563833_100563963_100564217_100564304_100564931
transcript_168008.known	chr7	+	1327	4	FSM	ENSG00000106351.13	ENST00000477022.1	1327	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	20.8326666559997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTCTTCAGGCCTTCTT	-11	True	NA	NA	False	AATAAA	-23	NA	100539211	100556370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100539568_100548821_100548916_100550395_100550512_100555609
transcript_168012.known	chr7	+	1516	9	FSM	ENSG00000106333.13	ENST00000223061.6	1516	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	64.0248975008941	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCAGATCTCCATGCTT	-4	True	NA	27	True	AATAAA	-18	NA	100602362	100608175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_168017.nnic	chr7	+	1456	9	NNC	ENSG00000106333.13	novel	960	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	98.4872295021035	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	759	False	NA	23	True	AATAAA	-14	NA	100603160	100608171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100603294_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_168019.nic	chr7	+	2099	8	NIC	ENSG00000106333.13	novel	1516	9	NA	NA	-127	0	intron_retention	FALSE	canonical	3	159	junction_1	68.3827762059472	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	NA	False	NA	23	True	AATAAA	-14	NA	100602235	100608171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_16802.nnic	chr1	+	1361	8	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-72	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_7	119.037466233732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	NA	False	NA	NA	False	NA	NA	NA	174874385	174990409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174989848
transcript_168031.nic	chr7	+	1009	7	NIC	ENSG00000106333.13	novel	960	4	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	108.455315939587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	3	True	NA	23	True	AATAAA	-14	NA	100604448	100608171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100604503_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_168037.nic	chr7	+	1601	6	NIC	ENSG00000106333.13	novel	960	4	NA	NA	-121	0	intron_retention	FALSE	canonical	3	31	junction_1	118.77811246185	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	-4	True	NA	23	True	AATAAA	-14	NA	100604316	100608171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100604503_100605090_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_168040.known	chr7	-	1111	6	FSM	ENSG00000205307.12	ENST00000622764.3	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.0776104615627	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCGTGTGGCTGGGA	-9	True	NA	-32	True	AATAAA	-20	NA	100573900	100572227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296_100573401_100573596
transcript_168046.known	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	22.7573327473064	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	9	True	NA	-9	True	AATAAA	-39	NA	100586129	100574010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
transcript_168048.known	chr7	+	1053	6	FSM	ENSG00000106330.12	ENST00000223054.8	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	115.352329842097	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTACTCATTTTCCA	3983	False	NA	-27	True	AAAACA	-6	NA	100612101	100615326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612242_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_16805.known	chr1	+	710	7	FSM	ENSG00000152061.24	ENST00000465412.5	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	52.382142843615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAAGGAGTGAAATC	39	False	NA	NA	False	NA	NA	NA	174874470	174982900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833
transcript_168054.known	chr7	+	1154	5	FSM	ENSG00000106330.12	ENST00000393950.7	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	22.3941956765587	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	-15	True	NA	24	True	AATAAA	-21	NA	100612539	100615377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_168055.known	chr7	+	1115	5	FSM	ENSG00000106330.12	ENST00000424091.2	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	177.973839369723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	1	True	NA	31	True	AATAAA	-28	NA	100612555	100615384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612997_100613193_100613270_100613506_100613707_100614866_100615032_100615151
transcript_168058.known	chr7	+	571	3	FSM	ENSG00000106330.12	ENST00000497456.1	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTCCTGGTTCAGTCT	260	False	NA	NA	False	GATAAA	-12	NA	100612814	100613789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612997_100613193_100613270_100613476
transcript_168062.known	chr7	+	1016	6	FSM	ENSG00000106330.12	ENST00000379527.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	165.218643015853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCAGAAATGTAGGGTA	43	False	NA	20	True	AATAAA	-17	NA	100612429	100615373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612486_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_168064.known	chr7	-	3131	19	FSM	ENSG00000106327.13	ENST00000462107.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_18	8.17497687541563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGTTGACATCTGTT	3828	False	NA	NA	False	AATAAA	-18	NA	100642721	100620419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415_100633557_100640685_100640873_100640975_100641229_100641476_100641767_100642690
transcript_168069.known	chr7	-	2421	15	FSM	ENSG00000106327.13	ENST00000476304.5	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.40785520878506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGTGGAGTTTCAATATC	9093	False	NA	NA	False	NA	NA	NA	100633650	100620462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415
transcript_168074.known	chr7	-	610	3	FSM	ENSG00000106327.13	ENST00000475011.1	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTCTACTAAAAAAAAAAA	9185	False	NA	NA	False	NA	NA	NA	100633558	100632768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100633124_100633228_100633341_100633415
transcript_168075.nic	chr7	-	752	6	ISM	ENSG00000077080.10	ENST00000160382.10	1524	14	9083	0	373	0	3prime_fragment	FALSE	canonical	3	21	junction_5	6.61513416341649	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	9047	False	NA	NA	False	AGTAAA	-20	NA	100647365	100643096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647086_100647222
transcript_168077.known	chr7	+	1664	10	FSM	ENSG00000172354.10	ENST00000303210.9	1664	10	0	0	0	0	multi-exon	FALSE	canonical	3	818	junction_1	134.646863230369	3433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTCTGCCCTTGCTG	-1	True	NA	29	True	CATAAA	-22	NA	100673739	100679169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100673924_100676176_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_168091.known	chr7	+	1478	9	FSM	ENSG00000172354.10	ENST00000424361.5	1478	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	374.02688322499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCATAAAGGAGCCAATT	8	False	NA	-2	True	TTTAAA	-37	NA	100673748	100679138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100673924_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_168095.known	chr7	+	1524	9	FSM	ENSG00000172354.10	ENST00000393924.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_2	115.680324601896	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCCTTGCTGTGTTC	8	True	NA	34	True	CATAAA	-27	NA	100676137	100679174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_168096.nic	chr7	-	6008	28	NIC	ENSG00000146830.11	novel	5867	28	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_26	16.7084250533693	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	167	False	NA	-8	True	AATAAA	-20	NA	100694282	100679506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100689301_100689556_100694109
transcript_168097.nic	chr7	-	4188	28	NIC	ENSG00000146830.11	novel	5867	28	NA	NA	-32	-1820	combination_of_known_junctions	FALSE	canonical	3	13	junction_26	16.7084250533693	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAGGAGGCTGAAAGAA	167	False	NA	21	True	AAAAAG	-21	NA	100694282	100681326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100689301_100689556_100694109
transcript_16810.known	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	94.9116548281728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	26	False	NA	16	True	AATAAA	-20	NA	174874457	174958182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
transcript_168102.known	chr7	-	6559	27	FSM	ENSG00000146830.11	ENST00000678049.1	6559	27	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_26	14.6157894680769	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	4	True	NA	-8	True	AATAAA	-20	NA	100694250	100679506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100689556_100694109
transcript_168106.nnic	chr7	-	3925	27	NIC	ENSG00000146830.11	novel	6559	27	NA	NA	-23	-1820	combination_of_known_splicesites	FALSE	canonical	3	10	junction_26	16.5579938326874	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAGGAGGCTGAAAGAA	-19	True	NA	21	True	AAAAAG	-21	NA	100694273	100681326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100694109
transcript_16811.known	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	128.971142336398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	25	False	NA	21	True	AATAAA	-25	NA	174875545	174958187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
transcript_168119.nic	chr7	-	5005	26	NIC	ENSG00000146830.11	novel	6559	27	NA	NA	-32	-1820	intron_retention	FALSE	canonical	3	31	junction_25	14.8783870093502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAGGAGGCTGAAAGAA	167	False	NA	21	True	AAAAAG	-21	NA	100694282	100681326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100689556_100694109
transcript_168124.nic	chr7	-	3330	25	NIC	ENSG00000146830.11	novel	5867	28	NA	NA	-32	1438	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	14.5339043274682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGGAGGAAGAAGAGAAGC	167	False	NA	NA	False	NA	NA	NA	100694282	100682440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100689301_100689556_100694109
transcript_16814.known	chr1	+	2835	6	FSM	ENSG00000116161.18	ENST00000613570.4	2835	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1232.48454757048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGTATAAAAACAA	6610	False	NA	NA	False	AATAAA	-24	NA	174999162	175011715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174999690_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_168145.known	chr7	+	850	2	FSM	ENSG00000172336.5	ENST00000303151.5	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	0	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCATCCCACTGCCA	-14	True	NA	18	True	AATAAA	-19	NA	100706120	100707486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100706305_100706820
transcript_168146.known	chr7	+	1662	5	FSM	ENSG00000130427.3	ENST00000252723.3	1662	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTCTTGGCTTTTCTG	-8	True	NA	4	True	NA	NA	NA	100720467	100723700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100720994_100721557_100721704_100721961_100722049_100722663_100722844_100722977
transcript_168148.known	chr7	-	4353	17	FSM	ENSG00000196411.10	ENST00000358173.8	4353	17	0	0	0	0	multi-exon	TRUE	canonical	3	415	junction_16	42.5175974597578	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGGTGATGGACTAGA	-4	True	NA	-9	True	AATAAA	-32	NA	100827523	100802564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918_100814022_100817191_100817358_100818519_100818645_100819556_100819890_100820140_100820297_100822270_100822668_100823643_100823932_100824202_100824274_100826978
transcript_16816.known	chr1	+	2869	6	FSM	ENSG00000116161.18	ENST00000367679.7	2869	6	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_4	104.535926838575	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCGAGGGACGAGA	-16	True	NA	NA	False	NA	NA	NA	174999946	175012027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_168161.nic	chr7	+	3644	14	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-326	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	21.8978262140197	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852386	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852840_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168163.known	chr7	+	3315	14	FSM	ENSG00000146828.18	ENST00000354161.8	3315	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	21.3716064471106	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCTGAGCAGTGCT	-29	True	NA	14	True	AATAAA	-15	NA	100852712	100867010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100852836_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168176.nnic	chr7	+	3020	13	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	26.8900797486525	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852701	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852840_100854155_100854379_100854619_100854755_100855705_100855838_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168196.nic	chr7	+	3062	12	NIC	ENSG00000146828.18	novel	1912	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	24.8855230244081	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852701	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852840_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_16820.known	chr1	+	804	5	FSM	ENSG00000116161.18	ENST00000473925.1	804	5	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_4	97.5320460156558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATTTTTAATAGTTT	-8	True	NA	NA	False	TTTAAA	-24	NA	174999954	175008754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608
transcript_168200.nic	chr7	+	3362	12	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-315	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	24.3021612479696	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852397	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852836_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168208.nnic	chr7	+	2957	11	NNC	ENSG00000146828.18	novel	4128	10	NA	NA	-330	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.8403020115098	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852382	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100852639_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168217.nic	chr7	+	2749	11	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	26.2640438622844	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852701	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852836_100854155_100854379_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168218.nic	chr7	+	3139	11	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-315	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.1124449195846	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852397	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852836_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168232.nic	chr7	+	2803	10	NIC	ENSG00000146828.18	novel	4433	9	NA	NA	-284	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	24.5467555875831	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852428	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852840_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168243.nic	chr7	+	2409	8	NIC	ENSG00000146828.18	novel	4462	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	27.8076483385857	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100826810	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100827048_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_168246.nnic	chr7	+	2306	8	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.8090121953785	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852701	100867009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852836_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_16825.known	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	9	True	NA	NA	False	NA	NA	NA	175023415	175014244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175014852_175018417_175018577_175023271
transcript_168251.known	chr7	+	2269	14	FSM	ENSG00000146828.18	ENST00000540482.5	2269	14	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_13	26.3250055490927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGGAAAAATGAAAAGTC	-23	True	NA	NA	False	AATAAA	-20	NA	100852718	100865538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100852836_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865286
transcript_168255.known	chr7	+	1693	9	FSM	ENSG00000087077.14	ENST00000200457.9	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_6	60.5050359474317	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	-15	True	NA	24	True	AAGAAA	-27	NA	100867386	100873454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_16826.known	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_2	18	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-1	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175014852_175018417_175018577_175023363
transcript_168261.nic	chr7	+	2180	8	ISM	ENSG00000087077.14	ENST00000200457.9	1693	9	-62	2	-62	-1	intron_retention	FALSE	canonical	3	626	junction_6	39.9622270630246	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCAAGTCTGTTGTCT	383	False	NA	22	True	AAGAAA	-25	NA	100867324	100873452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623
transcript_168263.nic	chr7	+	2733	8	NIC	ENSG00000087077.14	novel	1693	9	NA	NA	-241	0	intron_retention	FALSE	canonical	3	653	junction_3	53.4575933400886	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	204	False	NA	24	True	AAGAAA	-27	NA	100867145	100873454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100871722_100872623_100872745_100873171
transcript_168271.known	chr7	+	1303	8	FSM	ENSG00000087077.14	ENST00000619988.4	1303	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	249.871313818509	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCCTAGAAGTACCTGC	96	False	NA	NA	False	NA	NA	NA	100867497	100873303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100867607_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_168319.known	chr7	+	2955	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_17	177.158817272514	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	-23	True	NA	15	True	AATAAA	-16	NA	100875125	100888664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_16832.known	chr1	-	4548	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	8.9566858950296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTCTGCCATATTTCT	5	True	NA	-2	True	AATAAA	-21	NA	175192776	175156985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
transcript_168322.known	chr7	+	2893	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_17	180.583342228193	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	36	True	NA	15	True	AATAAA	-16	NA	100875184	100888664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_16835.known	chr1	-	2485	3	FSM	ENSG00000235750.10	ENST00000545251.6	2485	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCACTTGGGCTGCTT	2	True	NA	NA	False	ATTAAA	-17	NA	175192754	175158952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175161147_175166561_175166738_175192639
transcript_168405.known	chr7	+	582	2	FSM	ENSG00000087087.20	ENST00000620394.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGAAGCACTGTTTATA	-38	True	NA	NA	False	NA	NA	NA	100875110	100875936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100875329_100875572
transcript_168408.known	chr7	-	995	1	FSM	ENSG00000176125.7	ENST00000388761.4	995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGAGTTACTCTGGAA	-25	True	NA	-17	True	AATAAA	-21	NA	100889715	100888720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100888700_100889700
transcript_168410.known	chr7	-	1906	5	FSM	ENSG00000087085.16	ENST00000419336.6	1906	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	11.6054943884352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	0	True	NA	-4	True	AATAAA	-13	NA	100895886	100889993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100890336_100891168_100891339_100892333_100892555_100893164_100894253_100895801
transcript_168412.known	chr7	-	2172	5	FSM	ENSG00000087085.16	ENST00000241069.11	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	9.33742469849155	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-2	True	NA	-4	True	AATAAA	-13	NA	100895888	100889993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100890336_100891168_100891339_100892333_100892819_100893164_100894253_100895801
transcript_168413.nnic	chr7	-	2512	5	NNC	ENSG00000087085.16	novel	2928	5	NA	NA	-571	0	intron_retention	FALSE	canonical	2	2	junction_4	11.3660679216693	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	2026	False	NA	-4	True	AATAAA	-13	NA	100894959	100889993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_100890336_100891168_100891339_100892333_100892819_100893164_100894256_100894535
transcript_168418.known	chr7	-	2956	5	FSM	ENSG00000087085.16	ENST00000302913.8	2956	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	6.12372435695795	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGAGTGTGCGCGACTAG	1065	False	NA	-5	True	AATAAA	-12	NA	100895920	100889994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100891089_100891168_100891339_100892333_100892819_100893164_100894253_100895801
transcript_168420.nic	chr7	-	2554	4	NIC	ENSG00000087085.16	novel	2172	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	8	junction_3	10.077477638554	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	1061	False	NA	-4	True	AATAAA	-13	NA	100895924	100889993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100890336_100891168_100891339_100892333_100894253_100895801
transcript_168429.known	chr7	+	1093	4	FSM	ENSG00000169894.18	ENST00000614399.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	43.6882898116494	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATCCTGCACCCCAGT	27	False	NA	NA	False	NA	NA	NA	100966237	100967746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100966560_100966651_100966744_100966898_100966952_100967120
transcript_168431.known	chr7	+	502	3	FSM	ENSG00000205277.10	ENST00000473098.5	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	18	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	NA	False	NA	16	True	AATAAA	-22	NA	101016877	101018939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101016946_101017574_101017664_101018594
transcript_168432.known	chr7	-	372	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	64	6	7	-5	multi-exon	FALSE	canonical	3	48	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCCAGTGGTGGTATT	-3	True	NA	-6	True	AATAAA	-16	NA	101017601	101014324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101014440_101015197_101015268_101017414
transcript_168433.known	chr7	+	675	2	FSM	ENSG00000205277.10	ENST00000474482.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	58	False	NA	16	True	AATAAA	-22	NA	101017333	101018939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101017664_101018594
transcript_168434.known	chr7	+	566	3	FSM	ENSG00000205277.10	ENST00000467414.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	-13	True	NA	13	True	AATAAA	-19	NA	101017262	101018936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101017398_101017574_101017664_101018594
transcript_168441.known	chr7	+	10910	3	FSM	ENSG00000169871.13	ENST00000306085.11	10910	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTCAGAAGGGTTTA	-7	True	NA	13	True	AATAAA	-21	NA	101085480	101097967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101085572_101087005_101087169_101087311
transcript_168445.known	chr7	+	3156	9	FSM	ENSG00000106366.9	ENST00000223095.5	3156	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_7	1.6583123951777	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTCAGGACAGTCAC	24	True	NA	5	True	AATAAA	-16	NA	101127103	101139247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101127245_101128392_101128665_101130420_101130655_101131874_101132070_101133694_101133894_101135493_101135595_101135714_101135802_101137000_101137085_101137404
transcript_168447.known	chr7	+	1226	5	FSM	ENSG00000106367.15	ENST00000337619.11	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	28.577744837548	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGGCCTTGGGCTCT	4	True	NA	39	True	AATAAA	-19	NA	101154475	101161276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101154518_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_168449.known	chr7	+	573	5	FSM	ENSG00000106367.15	ENST00000429457.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	79.6413837147497	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGAGGAGATGGGT	53	False	NA	NA	False	NA	NA	NA	101154524	101160537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101154653_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_16845.known	chr1	-	2826	20	FSM	ENSG00000143207.21	ENST00000367669.8	2826	20	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_16	81.2559650484546	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	-26	True	NA	-4	True	AATAAA	-38	NA	176207286	175944830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176162868_176162989_176163814_176163892_176175909_176176008_176184632_176184693_176206571
transcript_168451.known	chr7	+	779	5	FSM	ENSG00000106367.15	ENST00000646560.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	83.9583229942095	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCTGCCTTTGCAGAA	-8	True	NA	NA	False	NA	NA	NA	101154984	101160827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101155029_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_168454.known	chr7	-	2551	2	FSM	ENSG00000128564.8	ENST00000249330.3	2551	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTCGGTTATTCAC	0	True	NA	-1	True	AATAAA	-20	NA	101165569	101162508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101164864_101165373
transcript_168456.nnic	chr7	-	2710	20	NNC	ENSG00000106397.12	novel	2821	19	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	42.0912476673465	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	5897	False	NA	-11	True	AATAAA	-14	NA	101217641	101205983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165_101217225_101217395
transcript_168468.known	chr7	+	728	5	FSM	ENSG00000106400.12	ENST00000305105.3	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_1	167.633528865797	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	-4	True	NA	34	True	AATAAA	-17	NA	101218164	101224190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101218218_101222603_101222775_101223476_101223557_101223672_101223843_101223936
transcript_16847.nnic	chr1	-	2731	19	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	113.438907798291	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	0	True	NA	-4	True	AATAAA	-38	NA	176207260	175944830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176162868_176162989_176163814_176163892_176175909_176176008_176184632_176184693_176206571
transcript_168471.known	chr7	-	2821	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_15	16.478287247687	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	12	True	NA	-11	True	AATAAA	-14	NA	101217581	101205983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
transcript_168478.nnic	chr7	-	3808	9	Fusion	ENSG00000214253.9_ENSG00000106404.14	novel	2131	6	NA	NA	9	0	multi-exon	FALSE	canonical	2	6	junction_3	263.261959604877	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTTGAAGGTGTCAGA	-8	True	NA	-3	True	AATAAA	-18	NA	101252307	101232093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_101232516_101232603_101232721_101232832_101232915_101234277_101234443_101237364_101237825_101237937_101239904_101240141_101240248_101240829_101240907_101251894
transcript_16848.known	chr1	-	2124	19	FSM	ENSG00000143207.21	ENST00000308769.12	2124	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_13	119.535585382929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGTTAACTCAAGTCAAAT	530	False	NA	NA	False	ATTAAA	-44	NA	176206978	175945152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176149005_176149075_176162868_176162989_176163826_176163892_176175909_176176008_176184632_176184693_176206571
transcript_168486.known	chr7	-	2131	6	FSM	ENSG00000106404.14	ENST00000401528.5	2131	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	11.2142766151009	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTTGAAGGTGTCAGAAG	6289	False	NA	-1	True	AATAAA	-20	NA	101238820	101232091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101232516_101232603_101232721_101232832_101232915_101234277_101234443_101237364_101237825_101237937
transcript_168493.known	chr7	-	870	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_4	47.7094068292617	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTTCCTCCCTTTCC	-5	True	NA	NA	False	NA	NA	NA	101245081	101239471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
transcript_168494.known	chr7	-	1005	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	262.356984850794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	8	True	NA	-1	True	AATAAA	-21	NA	101252291	101239611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
transcript_168496.known	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	248.463724157516	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	1	True	NA	NA	False	NA	NA	NA	101245075	101239457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
transcript_168497.known	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	258.833279673744	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-17	True	NA	17	True	AATAAA	-39	NA	101252316	101239593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
transcript_168498.known	chr7	-	631	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	291.356597087944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCGTTGAGGGGAGG	7251	False	NA	4	True	AATAAA	-26	NA	101245048	101239606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
transcript_168499.known	chr7	-	345	2	FSM	ENSG00000214252.4	ENST00000454506.2	345	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGAACAACAGACCGCG	NA	False	NA	NA	False	NA	NA	NA	101289771	101287481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101287744_101289688
transcript_16850.known	chr1	-	2034	18	FSM	ENSG00000143207.21	ENST00000367667.5	2034	18	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_15	112.990644803669	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	817	False	NA	-4	True	AATAAA	-38	NA	176206691	175944830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176175909_176176008_176184632_176184693_176206571
transcript_168505.known	chr7	+	867	2	FSM	ENSG00000232301.3	ENST00000429254.3	887	2	20	0	20	0	multi-exon	FALSE	canonical	3	296	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCGATTTTGCAAGAT	NA	False	NA	12	True	AATAAA	-17	NA	101299577	101301346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101299867_101300768
transcript_168508.known	chr7	-	4881	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	17.0055138117024	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-34	True	NA	-8	True	ATTAAA	-26	NA	101321812	101310913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
transcript_168509.known	chr7	-	917	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	102.704538469447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAATACCGACTGGC	14	True	NA	25	True	NA	NA	NA	101321764	101314752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
transcript_168510.known	chr7	-	1727	4	FSM	ENSG00000128581.17	ENST00000440362.5	1727	4	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	19.6015872373189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTTGAATGTGATTT	-12	True	NA	-10	True	NA	NA	NA	101321790	101314787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101319033_101321670
transcript_168511.known	chr7	-	875	4	FSM	ENSG00000128581.17	ENST00000437644.2	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	114.126635317479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTGTATTGGCTTGAAT	1	True	NA	-17	True	NA	NA	NA	101321777	101314794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101318955_101319033_101321670
transcript_168515.known	chr7	+	1194	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	-13	True	NA	10	True	ATTAAA	-17	NA	101308295	101311343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101308549_101309613_101309695_101310483
transcript_168516.known	chr7	-	567	3	FSM	ENSG00000128581.17	ENST00000495166.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	126.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCACATCCAGCTCCTG	-45	True	NA	NA	False	NA	NA	NA	101321823	101315071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101321670
transcript_168517.known	chr7	-	923	3	FSM	ENSG00000128581.17	ENST00000485695.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	98.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACTCAGGAGGCTGAG	-7	True	NA	NA	False	AATACA	-38	NA	101321785	101315824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101316543_101318123_101318214_101321670
transcript_168520.known	chr7	+	4596	2	FSM	ENSG00000232445.2	ENST00000663483.1	4596	2	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTATCATTGGGCT	5480	False	NA	NA	False	ATTAAA	-2	NA	101308269	101314800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101308549_101310483
transcript_16853.nnic	chr1	-	2669	18	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_13	115.828443716137	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	2	True	NA	-4	True	AATAAA	-38	NA	176207258	175944830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176162868_176162989_176163814_176163892_176175909_176176008_176184632_176184693_176206571
transcript_168538.known	chr7	+	2978	13	FSM	ENSG00000160963.14	ENST00000313669.12	2978	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	62.0821028960843	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	5	True	NA	15	True	AATAAA	-15	NA	101362874	101559024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101363191_101419976_101420100_101447683_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_168543.known	chr7	+	2970	13	FSM	ENSG00000160963.14	ENST00000613501.1	2970	13	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	60.178149873706	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	7	True	NA	15	True	AATAAA	-15	NA	101362876	101559024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_16855.nnic	chr1	-	2768	17	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	-237	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_15	113.282952573412	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	-15	False	NA	-4	True	AATAAA	-38	NA	176207523	175944830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176184632_176184693_176206571
transcript_168553.nnic	chr7	+	3169	12	NIC	ENSG00000160963.14	novel	2978	13	NA	NA	-227	0	combination_of_known_splicesites	TRUE	canonical	3	28	junction_9	107.464235834398	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	NA	False	NA	15	True	AATAAA	-15	NA	101362647	101559024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_101363191_101419976_101420100_101447683_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101553325_101553377_101555786_101555872_101557369
transcript_168561.nnic	chr7	+	2985	12	NIC	ENSG00000160963.14	novel	2970	13	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	106.446587700395	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	0	True	NA	15	True	AATAAA	-15	NA	101362825	101559024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101553325_101553377_101555786_101555872_101557369
transcript_168599.known	chr7	+	2929	23	FSM	ENSG00000257923.12	ENST00000622516.6	2929	23	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_17	40.0033056485326	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	0	True	NA	16	True	AATAAA	-16	NA	101816006	102283958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_168600.known	chr7	+	3026	23	FSM	ENSG00000257923.12	ENST00000437600.9	3026	23	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_10	47.9641739579769	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	NA	False	NA	16	True	AATAAA	-16	NA	101815903	102283958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178474_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_168603.known	chr7	+	2776	22	FSM	ENSG00000257923.12	ENST00000425244.6	2776	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.5144564531028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTGCCCTGTGCTCT	14	True	NA	15	True	AATAAA	-15	NA	101816020	102283957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_168604.known	chr7	+	2878	22	FSM	ENSG00000257923.12	ENST00000547394.6	2878	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.1106010254058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTGCCCTGTGCTCT	2	True	NA	15	True	AATAAA	-15	NA	101816008	102283957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_168608.nic	chr7	+	3091	8	ISM	ENSG00000257923.12	ENST00000645010.1	13651	22	-161	140814	-111	1749	5prime_fragment	FALSE	canonical	3	199	junction_6	17.9580008886949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAATATTGGGCCTATTT	NA	False	NA	NA	False	NA	NA	NA	101815792	102117419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206
transcript_16861.nnic	chr1	-	2440	16	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_14	136.380676376417	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	5	True	NA	-4	True	AATAAA	-38	NA	176207255	175944830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176149005_176149075_176184632_176184693_176206571
transcript_168610.known	chr7	+	559	2	FSM	ENSG00000257923.12	ENST00000607092.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGGGGTGGAAGGTC	1	True	NA	NA	False	NA	NA	NA	101816007	101916587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114
transcript_168612.known	chr7	+	1566	8	FSM	ENSG00000257923.12	ENST00000487284.2	1566	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	14.4264496318253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAATAAACCACGGTTG	19	False	NA	-10	True	NA	NA	NA	102274173	102283932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_168613.known	chr7	+	1779	1	FSM	ENSG00000272219.1	ENST00000606640.1	1779	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAGAGTTTGTAGTAC	1242	False	NA	NA	False	NA	NA	NA	101960115	101961894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101960100_101961900
transcript_168615.nic	chr7	+	2276	9	FSM	ENSG00000160999.11	ENST00000444095.3	2236	9	-40	0	-40	0	multi-exon	FALSE	canonical	3	138	junction_1	29.6215715315714	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	1688	False	NA	11	True	ATTAAA	-21	NA	102286827	102321711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102287095_102300521_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
transcript_168617.known	chr7	+	3430	10	FSM	ENSG00000128563.13	ENST00000496391.5	3430	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.5393039481628	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTCTCTGTCTGGG	11	False	NA	20	True	AATAAA	-32	NA	102363896	102426676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102364412_102365954_102366077_102375822_102375950_102376211_102376323_102395976_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_168618.known	chr7	+	1625	9	FSM	ENSG00000128563.13	ENST00000482549.5	1625	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	69.0107555023128	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTGTTGGGACATGTGG	9	True	NA	34	True	AGTAAA	-17	NA	102363894	102425449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_168623.nic	chr7	+	2830	8	NIC	ENSG00000128563.13	novel	1625	9	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	3	16	junction_4	70.9141475767044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	NA	False	NA	10	True	AATAAA	-22	NA	102363827	102426666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_168629.known	chr7	+	602	5	FSM	ENSG00000239969.6	ENST00000492837.1	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	32.473065762259	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGGTCTCATCATTA	412	False	NA	35	True	TATAAA	-38	NA	102364297	102380631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102380484
transcript_168633.known	chr7	+	2159	6	FSM	ENSG00000128563.13	ENST00000397912.3	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	32.8998480239651	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	-24	True	NA	10	True	AATAAA	-22	NA	102396362	102426666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_168639.known	chr7	+	10811	4	FSM	ENSG00000160991.17	ENST00000356387.6	10811	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	64.6374504447692	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTCCCATTTTTTTT	-43	True	NA	NA	False	AATAAA	-15	NA	102433529	102456821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102436201_102436334_102438943_102439182_102446512
transcript_168640.known	chr7	+	10747	4	FSM	ENSG00000160991.17	ENST00000495936.7	10747	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	6.64997911442	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCATTTTTTTTTTTT	2	True	NA	NA	False	AATAAA	-19	NA	102433574	102456825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102436224_102436334_102438943_102439182_102446512
transcript_168641.known	chr7	+	758	3	FSM	ENSG00000160991.17	ENST00000488996.1	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	65	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGGCCGAGGGCCGGG	-24	True	NA	NA	False	NA	NA	NA	102433548	102447048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102436224_102436334_102446512
transcript_168642.known	chr7	+	10637	3	FSM	ENSG00000160991.17	ENST00000611770.5	10637	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	57.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCATTTTTTTTTTTT	3	True	NA	NA	False	AATAAA	-19	NA	102433575	102456825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102438943_102439182_102446512
transcript_168643.known	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-6	True	NA	-21	True	AATAAA	-20	NA	102464863	102456237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102457982_102459603_102459802_102464713
transcript_168651.known	chr7	+	2160	15	FSM	ENSG00000161036.13	ENST00000292616.10	2160	15	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_9	21.5545108683892	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAAAGGTGTTTCG	8	True	NA	20	True	ATTAAA	-19	NA	102464983	102473168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102465161_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102468378_102468553_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
transcript_168676.known	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2614	junction_3	164.719964384001	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	6	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
transcript_168683.known	chr7	-	6095	21	FSM	ENSG00000170667.15	ENST00000465829.6	6095	21	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_17	22.4728169128839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGATTAATGATTCATA	1	True	NA	-2	True	AATAAA	-17	NA	102517777	102479975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102483714_102483824_102483890_102485038_102485160_102488462_102488599_102490985_102491124_102493115_102493286_102493824_102493970_102494537_102494676_102494880_102495074_102495277_102495391_102496139_102496205_102496468_102496620_102496846_102496965_102500698_102500794_102501095_102501228_102503162_102503245_102506694_102506825_102509598_102509661_102510178_102510293_102511924_102511982_102517645
transcript_168685.nic	chr7	-	1202	4	ISM	ENSG00000170667.15	ENST00000541662.5	2794	20	-18	25641	-18	-25218	5prime_fragment	FALSE	canonical	3	17	junction_3	16.7597401199687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAGAGGCCGGGTGCA	NA	False	NA	NA	False	AATAAA	-37	NA	102517795	102508779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_102509661_102510178_102510293_102511924_102511982_102517645
transcript_168700.known	chr7	-	5604	21	FSM	ENSG00000105808.19	ENST00000262940.12	5604	21	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_20	19.6606205395455	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCTGGTCCTACCAGA	-3	True	NA	NA	False	AATAAA	-18	NA	102616756	102579645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102590158_102590297_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
transcript_168705.known	chr7	-	2787	20	FSM	ENSG00000105808.19	ENST00000449970.6	2787	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_19	19.4085682309547	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCTGGGGTCTTGT	-3	True	NA	NA	False	AGTAAA	-14	NA	102616756	102582324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
transcript_16876.known	chr1	-	3685	22	FSM	ENSG00000152092.16	ENST00000424564.2	3685	22	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_16	4.4390556900653	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTTGAAATTTTGTAC	26	True	NA	3	True	AATAAA	-20	NA	177164683	176868812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_176869028_176876536_176876638_176882858_176882995_176884338_176884491_176888070_176888205_176894561_176894831_176934151_176934341_176936265_176936371_176943890_176944019_176945925_176946121_176949184_176949352_176957677_176957829_176958344_176958483_176965162_176965238_177014790_177014876_177023403_177023572_177024582_177024733_177029633_177029742_177030805_177030953_177032455_177032850_177061077_177061266_177164393
transcript_168769.nic	chr7	-	1822	10	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	653.447098938477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	0	True	NA	-22	True	AATAAA	-15	NA	102572580	102537919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566581_102566737_102566996_102567084_102568009_102568185_102569834_102569925_102572442
transcript_16877.known	chr1	+	4097	8	FSM	ENSG00000198797.7	ENST00000361539.5	4097	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.55182578445717	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGAAAAGGCCTTTTT	-3	True	NA	NA	False	AGTAAA	-21	NA	177170957	177282422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_177171733_177229800_177230146_177255918_177256110_177257175_177257385_177273487_177273594_177276197_177276435_177278562_177278786_177280411
transcript_168783.nnic	chr7	-	1796	10	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	-19	24	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	337.139931383592	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	0	True	NA	-7	True	AATAAA	-16	NA	102671660	102637024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102665661_102665817_102666076_102666164_102667089_102667265_102668914_102669005_102671551
transcript_168791.nic	chr7	-	1667	9	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_8	662.884122132217	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	0	True	NA	-22	True	AATAAA	-15	NA	102572580	102537919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572442
transcript_168792.known	chr7	-	1598	9	FSM	ENSG00000168255.20	ENST00000379340.9	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	639.302158607336	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	41	False	NA	-21	True	AATAAA	-16	NA	102572539	102537918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572471
transcript_168796.nnic	chr7	-	1614	9	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	-12	24	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	177.589942001229	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	84	False	NA	-7	True	AATAAA	-16	NA	102671653	102637024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102665661_102665817_102666076_102666164_102668914_102669005_102671551
transcript_168797.nnic	chr7	-	1681	9	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	-30	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	344.00908418238	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	66	False	NA	-7	True	AATAAA	-16	NA	102671671	102637024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671522
transcript_168798.known	chr7	-	1598	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	305.631620582688	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAATGCCCCCAAAA	96	False	NA	-31	True	NA	NA	NA	102671641	102637048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
transcript_168804.known	chr7	-	1532	8	FSM	ENSG00000168255.20	ENST00000486319.5	1532	8	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	157.46603132234	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	NA	False	NA	-22	True	AATAAA	-15	NA	102572649	102537919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572471
transcript_168805.known	chr7	-	2553	8	FSM	ENSG00000168255.20	ENST00000489144.5	2553	8	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	670.944110936224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGTCCGTGACATCAT	13	False	NA	-20	True	AATAAA	-17	NA	102572567	102537917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102568185_102569834_102569925_102572471
transcript_168824.known	chr7	-	348	4	FSM	ENSG00000285437.2	ENST00000621093.4	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	853.941580099144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	59	False	NA	NA	False	NA	NA	NA	102572521	102567050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102567084_102568009_102568185_102569834_102569925_102572471
transcript_168830.known	chr7	-	558	4	FSM	ENSG00000105808.19	ENST00000522443.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	18.8738502225228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAGAGGGGCTGCTATG	7	False	NA	NA	False	NA	NA	NA	102616746	102608557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102608823_102609340_102609455_102611085_102611143_102616624
transcript_168832.known	chr7	-	348	4	FSM	ENSG00000228049.7	ENST00000333432.8	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	416.443140043018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	136	False	NA	NA	False	NA	NA	NA	102671601	102666130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102666164_102667089_102667265_102668914_102669005_102671551
transcript_168835.known	chr7	-	4630	3	FSM	ENSG00000285437.2	ENST00000511313.5	4630	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGAAAATTAGCTTTA	NA	False	NA	NA	False	AATAAA	-34	NA	102572583	102562655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102567084_102569834_102569925_102572471
transcript_168836.known	chr7	-	932	3	FSM	ENSG00000285437.2	ENST00000443430.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	1095.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCATGTGCTGTAG	NA	False	NA	NA	False	AATACA	-14	NA	102572583	102567483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102568185_102569834_102569925_102572442
transcript_168837.known	chr7	-	2096	3	ISM	ENSG00000168255.20	ENST00000489144.5	2553	8	-13	28370	3	-22720	5prime_fragment	FALSE	canonical	3	659	junction_2	796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAAGGTCC	0	True	NA	NA	False	NA	NA	NA	102572580	102566287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_102568185_102569834_102569925_102572471
transcript_16884.known	chr1	-	2329	2	FSM	ENSG00000224687.2	ENST00000421505.1	2329	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGTAGAATGATTTAT	NA	False	NA	-8	True	AATAAA	-19	NA	178093984	178091507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_178093413_178093560
transcript_168847.known	chr7	-	2065	3	FSM	ENSG00000228049.7	ENST00000358438.6	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAAAAGTCC	2	True	NA	NA	False	NA	NA	NA	102671629	102665367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102667265_102668914_102669005_102671551
transcript_168848.nnic	chr7	-	2062	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-31	1067	combination_of_known_splicesites	FALSE	canonical	3	168	junction_1	163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATGCTTTTCTGCATT	0	True	NA	NA	False	AAAAAG	-10	NA	102671660	102664300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_16885.nic	chr1	+	1891	8	ISM	ENSG00000075391.17	ENST00000367649.8	9843	18	-336	35937	-336	-14994	5prime_fragment	FALSE	canonical	3	30	junction_1	6.26620348556037	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAGAATAATTATGTAG	23	True	NA	NA	False	AAAAAG	-9	NA	178093767	178442913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674
transcript_168855.known	chr7	+	1958	8	FSM	ENSG00000222011.9	ENST00000420217.1	1958	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	8.99205998963212	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTACTGATTCTTAAT	-9	True	NA	14	True	AATAAA	-18	NA	102749009	102809224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_168857.known	chr7	+	2211	8	FSM	ENSG00000222011.9	ENST00000413034.3	2211	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5195728954486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTACTGATTCTTAATA	-20	True	NA	15	True	AATAAA	-19	NA	102748998	102809225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102749659_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_168860.known	chr7	+	2217	8	FSM	ENSG00000222011.9	ENST00000442873.5	2217	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	13.7988464469066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTACTGATTCTTAATA	NA	False	NA	15	True	AATAAA	-19	NA	102748970	102809225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102749637_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_168864.known	chr7	+	1446	7	FSM	ENSG00000222011.9	ENST00000409231.7	1446	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.2864974749023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCACATGCCTTCTCAT	9	True	NA	NA	False	NA	NA	NA	102749027	102808840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102749418_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_168879.known	chr7	+	2371	7	FSM	ENSG00000170632.14	ENST00000323716.8	2371	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	171.170236898825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAAGGTTATACATATT	-12	True	NA	15	True	AATAAA	-15	NA	103075139	103099759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103075776_103075882_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
transcript_16888.known	chr1	+	9843	18	FSM	ENSG00000075391.17	ENST00000367649.8	9843	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	9.1858925988371	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGACTAAAGTTGCTAC	-8	True	NA	NA	False	AATAAA	-16	NA	178094103	178478850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456720_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
transcript_168887.known	chr7	+	2445	6	FSM	ENSG00000170632.14	ENST00000428183.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	196.674756895744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACTTACAAGGTTA	-20	True	NA	7	True	AATAAA	-7	NA	103074880	103099751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103075776_103075882_103083681_103083831_103086629_103086765_103097276_103097349_103098298
transcript_16889.known	chr1	+	14453	16	FSM	ENSG00000075391.17	ENST00000462775.5	14453	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	10.5947576135034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGTGTGTGGAAGGTG	19	False	NA	NA	False	AATAAA	-17	NA	178341470	178484147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178341609_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456699_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
transcript_168890.known	chr7	+	2524	6	FSM	ENSG00000170632.14	ENST00000441711.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	70.7265155369611	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	-20	True	NA	14	True	AATAAA	-14	NA	103074880	103099758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
transcript_168896.known	chr7	+	2347	5	FSM	ENSG00000170632.14	ENST00000454559.5	2347	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	174.861909803136	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	-20	True	NA	14	True	AATAAA	-14	NA	103074880	103099758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103097276_103097349_103098298
transcript_168899.known	chr7	+	2266	4	FSM	ENSG00000170632.14	ENST00000541300.5	2266	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	242.194137005833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAATCACTTACAAGGT	-20	True	NA	5	True	AATAAA	-5	NA	103074880	103099749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103098298
transcript_168900.nic	chr7	-	1959	7	NIC	ENSG00000161048.12	novel	4972	6	NA	NA	-109	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	7.69018133003955	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	235	False	NA	NA	False	NA	NA	NA	103149344	103102523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_103102674_103103050_103103123_103103423_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_168903.known	chr7	-	4972	6	FSM	ENSG00000161048.12	ENST00000341533.8	4972	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.54217089351845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	-10	True	NA	-3	True	AATAAA	-22	NA	103149232	103099775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103103123_103103423_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_168908.known	chr7	-	5140	5	FSM	ENSG00000161048.12	ENST00000465647.6	5140	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	5.78791845139511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	1	True	NA	-3	True	AATAAA	-22	NA	103149099	103099775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_168910.known	chr7	-	1822	5	FSM	ENSG00000161048.12	ENST00000427257.5	1822	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	3.34477204006491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTTTCCATTCTT	19	False	NA	NA	False	NA	NA	NA	103149560	103103086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103149278
transcript_168912.nic	chr7	-	2338	2	ISM	ENSG00000161048.12	ENST00000427257.5	1822	5	-37	23687	-37	16	5prime_fragment	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCAGGTGCAATAGAGT	NA	False	NA	NA	False	AATACA	-6	NA	103149597	103126773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103128793_103149278
transcript_168913.known	chr7	-	3006	3	FSM	ENSG00000170629.15	ENST00000446373.2	3040	3	34	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGAGTCTGGACTTTGG	13	True	NA	NA	False	AATAAA	-12	NA	103280277	103273091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103275628_103277613_103277639_103279832
transcript_168917.known	chr7	-	2291	17	FSM	ENSG00000105821.15	ENST00000379263.8	2291	17	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_11	59.9864568048489	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTAGGAGCATTTTA	2	True	NA	NA	False	TATAAA	-18	NA	103344767	103312288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_16892.known	chr1	+	7492	20	FSM	ENSG00000116191.19	ENST00000367635.8	7492	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	15.2184463081236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	-3	True	NA	-84	True	AATAAA	-14	NA	178725243	178921840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_168920.known	chr7	+	1509	13	FSM	ENSG00000105819.14	ENST00000453466.1	1509	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	187.714913869114	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAGCTAGAGAAAAATA	13	True	NA	47	True	ATTAAA	-41	NA	103297456	103312312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299534_103300186_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055_103312132_103312206
transcript_168924.known	chr7	+	3859	13	FSM	ENSG00000161057.13	ENST00000679205.1	3859	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	274.522413575933	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	NA	False	NA	NA	False	CATAAA	-19	NA	103344265	103370346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103344343_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_168925.known	chr7	+	3988	13	FSM	ENSG00000161057.13	ENST00000679341.1	3988	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	275.311780330753	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	NA	False	NA	NA	False	CATAAA	-19	NA	103344319	103370346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103344526_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_168927.known	chr7	+	1714	12	FSM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_8	46.0509958076482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTATTAATGGT	-9	True	NA	34	True	ATTAAA	-45	NA	103297434	103312415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055
transcript_16895.known	chr1	+	7512	19	FSM	ENSG00000116191.19	ENST00000367634.7	7441	19	-72	1	-18	1	multi-exon	FALSE	canonical	3	18	junction_14	22.4372925899145	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGGTGAGGATGTTTT	299	False	NA	-83	True	AATAAA	-15	NA	178725146	178921841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_168950.nic	chr7	-	1084	9	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-196	10126	-32	0	5prime_fragment	FALSE	canonical	3	293	junction_3	46.6154480832267	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTTCAAGGAAGAAGAAAAA	-10	True	NA	NA	False	GATAAA	-3	NA	103344862	103322599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_168953.known	chr7	-	854	8	FSM	ENSG00000105821.15	ENST00000454277.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	137.738587067484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-9	True	NA	NA	False	AAAAAG	-7	NA	103344778	103322726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341866_103344558
transcript_168954.nic	chr7	-	1027	8	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-196	10253	-32	0	5prime_fragment	FALSE	canonical	3	293	junction_2	48.8813640879839	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-10	True	NA	NA	False	AAAAAG	-7	NA	103344862	103322726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_168956.nic	chr7	-	959	7	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-196	11124	-32	0	5prime_fragment	FALSE	canonical	3	293	junction_1	52.7933602727548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGCAAATCATTAA	-10	True	NA	27	True	AAAAAG	-14	NA	103344862	103323597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_168960.known	chr7	-	1924	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_5	26.5835736975401	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTATTTATCTTT	-4	True	NA	-1	True	AATAAA	-24	NA	104208013	104126340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_168964.known	chr7	-	1409	9	FSM	ENSG00000164815.11	ENST00000447452.6	1409	9	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	26.7756885999221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGCAAATATTGAAAAAAA	52	False	NA	NA	False	ATTAAA	-25	NA	104207957	104167993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_168966.known	chr7	-	1214	7	FSM	ENSG00000164815.11	ENST00000485726.1	1214	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	91.8212333226302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATATATCTGAGGCTGG	0	True	NA	NA	False	NA	NA	NA	104208009	104187542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_104187968_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_168967.nic	chr7	+	2262	15	NIC	ENSG00000005483.22	novel	5524	27	NA	NA	0	-1171	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	19.5207895457585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAGAGAGAAAAGAAGAGA	712	False	NA	14	True	AAGAAA	-42	NA	105014163	105101478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424
transcript_168969.known	chr7	+	2523	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	27.3436184399167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	18	True	NA	NA	False	AATAAA	-16	NA	105014217	105091609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_168971.known	chr7	+	6840	26	FSM	ENSG00000005483.22	ENST00000334884.9	6840	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	31.499942857091	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTACAACAACTGTTTGAA	-10	True	NA	NA	False	AATACA	-1	NA	105014189	105114361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885_105102195_105105438_105105694_105105858_105105956_105107165_105107223_105107361_105107926_105108941_105109229_105110279_105110369_105110476_105110603_105110770_105110869_105111824
transcript_168972.nic	chr7	+	1968	13	NIC	ENSG00000005483.22	novel	5524	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	18.9824480332051	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	712	False	NA	-2	True	AAAAAG	-9	NA	105014163	105090132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_168980.known	chr7	+	1133	7	FSM	ENSG00000005483.22	ENST00000495267.5	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	16.327379867368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	8	True	NA	NA	False	GATAAA	-14	NA	105014207	105074777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
transcript_168982.nic	chr7	+	653	3	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-33	50543	-5	210	5prime_fragment	FALSE	canonical	3	30	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	-15	True	NA	NA	False	TTTAAA	-31	NA	105014184	105041066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105014536_105038125_105038200_105040838
transcript_168983.nic	chr7	+	600	2	ISM	ENSG00000005483.22	ENST00000495267.5	1133	7	-44	33711	0	210	5prime_fragment	FALSE	canonical	3	68	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	712	False	NA	NA	False	TTTAAA	-31	NA	105014163	105041066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105014536_105040838
transcript_168984.known	chr7	+	6714	26	NNC	ENSG00000005483.22	novel	7782	27	NA	NA	0	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5078612819712	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATTGTCCTGTACAAC	-10	True	NA	17	True	AATAAA	-20	NA	105014189	105114084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_105014498_105040874_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885_105102195_105105438_105105694_105105858_105106004_105106521_105106773_105107165_105107223_105107361_105107926_105108941_105109229_105110279_105110369_105110476_105110603_105110770_105110869_105111824
transcript_168985.known	chr7	-	2646	1	FSM	ENSG00000272918.1	ENST00000607968.1	2646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTGAGAAGTATACATT	NA	False	NA	NA	False	AATAAA	-18	NA	105105483	105102837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105102800_105105500
transcript_168988.known	chr7	-	3679	16	FSM	ENSG00000135250.17	ENST00000393651.8	3679	16	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_14	32.751183184734	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	-16	True	NA	-2	True	ATTAAA	-26	NA	105388921	105116373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_168994.nic	chr7	-	1093	11	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	-56	17015	combination_of_known_junctions	FALSE	canonical	2	15	junction_9	110.765021554641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGGCAGGCTGAGTT	412	False	NA	NA	False	AAAAAG	-19	NA	105388977	105143285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805_105268870_105388647_105388703_105388790
transcript_168996.nic	chr7	-	1118	10	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-56	26823	-56	17104	5prime_fragment	FALSE	canonical	3	229	junction_8	33.4464746522958	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCTCAGCTGCACCTT	412	False	NA	NA	False	AATAGA	-7	NA	105388977	105143196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_168998.nic	chr7	-	1029	10	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-56	26912	-56	17015	5prime_fragment	FALSE	canonical	3	229	junction_8	33.4464746522958	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGGCAGGCTGAGTT	412	False	NA	NA	False	AAAAAG	-19	NA	105388977	105143285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_169004.nic	chr7	-	984	9	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-56	28909	-56	15018	5prime_fragment	FALSE	canonical	3	229	junction_7	34.7266108337684	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTTACGCATATTA	412	False	NA	NA	False	NA	NA	NA	105388977	105145282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_169005.nic	chr7	-	971	9	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	-5	13808	combination_of_known_junctions	FALSE	canonical	2	15	junction_7	123.150251217771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAGCTGAGCCAGCT	-21	True	NA	NA	False	NA	NA	NA	105388926	105146492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805_105268870_105388647_105388703_105388790
transcript_169007.nic	chr7	-	958	8	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-56	30119	-56	13808	5prime_fragment	FALSE	canonical	3	229	junction_6	34.8372308466276	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAGCTGAGCCAGCT	412	False	NA	NA	False	NA	NA	NA	105388977	105146492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_16901.known	chr1	+	2031	6	FSM	ENSG00000186283.14	ENST00000367627.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	68.818602136341	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	12	True	NA	19	True	ATTAAA	-20	NA	179082069	179095996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179082388_179082939_179083054_179085627_179085894_179087910_179088090_179094092_179094218_179094967
transcript_169012.known	chr7	-	3480	16	FSM	ENSG00000091127.14	ENST00000356362.6	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	75.3548641797964	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGATAAGAATCTT	9822	False	105522271	-7	True	AATAAA	-20	NA	105522258	105456510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_169013.known	chr7	-	3525	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_4	27.8990242760487	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	0	True	NA	1	True	AATAAA	-28	NA	105522271	105456502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_169052.known	chr7	+	2860	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_8	14.4739385779816	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	5	True	NA	9	True	AATAAA	-16	NA	105532200	105567677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_16906.nic	chr1	+	1800	5	NIC	ENSG00000186283.14	novel	2031	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	138.194383026229	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	-23	True	NA	19	True	ATTAAA	-20	NA	179082034	179095996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_179082388_179082939_179083054_179087910_179088090_179094092_179094218_179094967
transcript_169067.nic	chr7	-	2551	4	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38773	0	-14979	0	3prime_fragment	FALSE	canonical	3	64	junction_1	15.9373774505092	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	3168	False	NA	-1	True	ATTAAA	-16	NA	105639245	105613473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352
transcript_169072.nic	chr7	-	3144	2	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38669	8647	-15083	-1888	internal_fragment	FALSE	canonical	3	103	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCTTGCTCGGTGCAT	3064	False	NA	NA	False	ATTAAA	-14	NA	105639349	105622120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105624268_105638352
transcript_169078.nnic	chr7	+	1275	5	NNC	ENSG00000128536.16	novel	993	4	NA	NA	-42	-2579	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	7.43303437365925	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAATGCCTGATTCTG	359	False	NA	NA	False	AGTAAA	-15	NA	105876753	105921604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_105877258_105911016_105911242_105912482_105912639_105919534_105919608_105921287
transcript_169089.nic	chr7	+	933	2	ISM	ENSG00000128536.16	ENST00000470188.5	2199	15	-67	121020	-42	847	5prime_fragment	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTGATGGTTGCAC	359	False	NA	7	True	ATTAAA	-19	NA	105876753	105911445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105877258_105911016
transcript_169090.nic	chr7	+	1357	2	ISM	ENSG00000128536.16	ENST00000470188.5	2199	15	-67	120596	-42	1271	5prime_fragment	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGAGTGTTGTTTTAA	359	False	NA	1	True	AATAAA	-13	NA	105876753	105911869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105877258_105911016
transcript_169091.known	chr7	-	1193	6	FSM	ENSG00000008282.9	ENST00000470347.1	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	281.664339240877	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAAAACCTTTATTT	46	True	NA	NA	False	AAAACA	-22	NA	106112221	106091456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106091940_106092563_106092670_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_169093.known	chr7	-	2130	5	FSM	ENSG00000008282.9	ENST00000455385.7	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	28.1424945589406	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	301	False	106112346	NA	False	AATAAA	-15	NA	106112312	106090504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_169096.known	chr7	-	2265	11	FSM	ENSG00000105835.13	ENST00000681936.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	234.355819215141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAATGTCTAGGCACT	0	True	NA	NA	False	ATTAAA	-16	NA	106284544	106250430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284347
transcript_169097.known	chr7	-	4457	11	FSM	ENSG00000105835.13	ENST00000680584.1	4457	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	197.658189812616	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTATTAGTGAAGTGT	817	False	NA	-24	True	AATAAA	-16	NA	106285094	106248308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284827
transcript_169102.known	chr7	-	2464	10	FSM	ENSG00000105835.13	ENST00000679951.1	2464	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	203.551855861575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	938	False	NA	-24	True	ATTAAA	-18	NA	106284973	106250042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106251194_106253016_106253152_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_169105.known	chr7	-	1495	8	FSM	ENSG00000105835.13	ENST00000354289.9	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_3	39.0143877176048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTTGGTA	719	False	NA	NA	False	TATAAA	-17	NA	106285192	106261489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_169108.known	chr7	-	2598	11	FSM	ENSG00000105835.13	ENST00000681878.1	2598	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	197.591497792795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTTATTAATTTTAAA	940	False	NA	-20	True	ATTAAA	-22	NA	106284971	106250038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275041_106277022_106277180_106284827
transcript_169109.known	chr7	+	3689	11	FSM	ENSG00000005249.13	ENST00000265717.5	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	281	junction_5	51.9893258275196	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATGTCATTATTTA	-10	True	NA	13	True	ATTAAA	-16	NA	107044704	107161811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107157185_107157325_107159448
transcript_169112.known	chr7	-	4658	22	FSM	ENSG00000164597.15	ENST00000297135.9	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	15.8128223753359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTAATCCTATATAT	-5	True	NA	-21	True	AATAAA	-30	NA	107563920	107201371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_169119.known	chr7	-	576	6	FSM	ENSG00000164597.15	ENST00000605888.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	6.73498329619309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTTTTTTTTT	-19	True	NA	NA	False	AATGAA	-5	NA	107563934	107527236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_169123.known	chr7	+	2704	11	FSM	ENSG00000105856.14	ENST00000468410.5	2704	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	32.996363435991	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTATCTCTG	833	False	NA	14	True	AATAAA	-6	NA	107168960	107202508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_169124.known	chr7	+	2834	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	49.6624606720207	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	4	True	NA	28	True	AATAAA	-20	NA	107169002	107202522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_169130.known	chr7	+	1676	8	FSM	ENSG00000105865.11	ENST00000443233.5	1676	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.1174740160604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATGGGTAGAGTGGGA	15	True	NA	NA	False	NA	NA	NA	107563987	107577850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573884_107575187_107575311_107576365_107576593_107577312
transcript_169131.known	chr7	+	2266	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13.6785248040981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	-2	True	NA	113	True	AATGAA	-16	NA	107563970	107578523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_169138.known	chr7	+	2911	8	FSM	ENSG00000075790.12	ENST00000005259.9	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	22.5125815163569	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTGCATATTAAATT	-1	True	NA	12	True	AATAAA	-20	NA	107580245	107620478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_16914.known	chr1	-	12217	12	FSM	ENSG00000143322.21	ENST00000502732.6	12217	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	2.85460335783774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCTGGAGATTGGAGTG	7	True	NA	-9	True	AATAAA	-24	NA	179229677	179099329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179133311_179133375_179229240
transcript_169147.known	chr7	+	3987	6	FSM	ENSG00000105879.12	ENST00000440859.8	3987	6	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	64.8647824323801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTAGATGAATTTTT	-5	True	NA	NA	False	AATAAA	-19	NA	107744141	107761667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_169149.known	chr7	-	772	2	FSM	ENSG00000241764.5	ENST00000663315.2	776	2	1	3	1	2	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTGTAGTTGTACGG	3	True	NA	-2	True	AATAAA	-20	NA	107743606	107742753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107743404_107743484
transcript_16915.known	chr1	-	3486	11	FSM	ENSG00000143322.21	ENST00000367623.8	3486	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.67630546142402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTAGCCTGGTGGGA	287	False	NA	-128	True	NA	NA	NA	179229397	179107717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179229240
transcript_169150.known	chr7	+	2003	6	FSM	ENSG00000105879.12	ENST00000222597.6	2003	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	133.526626558151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTAGAATTTGCTGTAA	-5	True	NA	9	True	AATAAA	-17	NA	107744141	107759686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107744177_107748879_107749048_107753413_107753512_107753894_107753979_107755417_107755492_107758142
transcript_169152.known	chr7	-	5650	34	FSM	ENSG00000091136.15	ENST00000222399.11	5650	34	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_33	41.4244973501943	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	6	True	NA	-9	True	AATAAA	-21	NA	108003161	107923798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_169156.known	chr7	-	4865	29	FSM	ENSG00000091136.15	ENST00000678232.1	4865	29	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_28	26.1165705080518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTAAACTTATATATGT	1207	False	NA	NA	False	ATTAAA	-9	NA	108003213	107931216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_169159.known	chr7	-	3764	25	FSM	ENSG00000091136.15	ENST00000679244.1	3764	25	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	46.0226204949503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGCAGGATGTGGTGA	1207	False	NA	NA	False	AATAAA	-16	NA	108003213	107942435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107942620_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_16916.nic	chr1	-	1068	3	ISM	ENSG00000143322.21	ENST00000511413.5	3240	13	-303	23219	-16	212	5prime_fragment	FALSE	canonical	0	0	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCCTGAAATACATTTTT	NA	False	NA	NA	False	AAAAAG	-16	NA	179229700	179130936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_179131482_179133311_179133375_179229240
transcript_169165.known	chr7	+	3537	14	FSM	ENSG00000091140.15	ENST00000205402.10	3537	14	0	0	0	0	multi-exon	FALSE	canonical	3	974	junction_10	113.609733727499	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTTATCTACTAAGC	14	True	NA	29	True	AATAAA	-33	NA	107891182	107921198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_169170.known	chr7	+	1993	13	FSM	ENSG00000091140.15	ENST00000440410.5	1993	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	339.91456238623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTATAAACCGAACT	4	True	NA	-16	True	NA	NA	NA	107891172	107919713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_169172.known	chr7	+	1802	12	FSM	ENSG00000091140.15	ENST00000415325.5	1802	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	354.255382504004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACATGGCTGGAGCT	-5	True	NA	NA	False	TTTAAA	-30	NA	107891163	107919593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107891290_107893199_107893279_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_169173.nic	chr7	-	3462	2	ISM	ENSG00000091136.15	ENST00000677485.1	6737	33	-231	75965	-151	-1366	5prime_fragment	FALSE	canonical	3	150	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGGAGCCAGGCTCTC	1056	False	NA	NA	False	NA	NA	NA	108003364	107999763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_108002972_108003110
transcript_169174.known	chr7	-	5706	34	FSM	ENSG00000091136.15	ENST00000678704.1	5706	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	56.090311540127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	1207	False	NA	-9	True	AATAAA	-21	NA	108003213	107923798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975229_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_169175.known	chr7	-	4569	11	FSM	ENSG00000135241.17	ENST00000257694.13	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	29.5805679458661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGCTTCTTTCTTTCT	-20	True	NA	NA	False	AATACA	-19	NA	108526135	108470416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108521475_108521522_108526028
transcript_16918.known	chr1	+	6840	16	FSM	ENSG00000057252.13	ENST00000367619.8	6840	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.2879565117552	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTTCTGATTCATT	-14	True	NA	29	True	ATTAAA	-19	NA	179293796	179358680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179293937_179302676_179302803_179323436_179323496_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
transcript_169183.known	chr7	-	3462	10	FSM	ENSG00000135241.17	ENST00000436062.5	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	30.1809358517739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTATCATTAACAAAAATA	1842	False	NA	-48	True	TATAAA	-27	NA	108526318	108471660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_169186.known	chr7	-	4268	10	FSM	ENSG00000135241.17	ENST00000426128.6	4268	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	54.7792427119869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCATGGCTTCTTTC	44	True	NA	NA	False	AATACA	-14	NA	108526071	108470421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108472676_108479183_108479380_108487944_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_169188.known	chr7	-	3384	3	FSM	ENSG00000177683.14	ENST00000415914.4	3384	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCTGAAAATCCAAAATG	-42	True	NA	89	True	AATAAA	-18	NA	108569706	108562131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108565106_108565829_108566023_108569489
transcript_169189.known	chr7	-	868	3	FSM	ENSG00000177683.14	ENST00000438865.1	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	31	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCCATTTTTGTAC	2132	False	NA	NA	False	AATAAA	-6	NA	108569750	108564569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108565106_108565951_108566023_108569489
transcript_169191.known	chr7	-	1051	2	FSM	ENSG00000177683.14	ENST00000484452.1	1051	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCACTAGCATAATAAGC	-24	True	NA	NA	False	AATAAA	-38	NA	108569688	108565170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108566023_108569489
transcript_169192.known	chr7	+	2409	3	FSM	ENSG00000128590.5	ENST00000249356.4	2409	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	9.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGCTGAGGATTATCT	-8	True	NA	9	True	AATAAA	-18	NA	108569873	108574850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_108570104_108571716_108571944_108572898
transcript_169196.known	chr7	-	2130	6	FSM	ENSG00000184903.10	ENST00000405709.7	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	18.3259379023285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATGTTTATGAAAGCTT	-9	True	NA	NA	False	AATAAA	-15	NA	111562492	110662643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850
transcript_169197.known	chr7	-	1205	7	FSM	ENSG00000184903.10	ENST00000331762.7	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	21.0765799460496	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCCTGTTTTGAGTA	NA	False	NA	-8	True	AATAAA	-12	NA	111562517	110663053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850_111561924_111562463
transcript_169198.known	chr7	+	1736	12	FSM	ENSG00000198839.10	ENST00000361946.8	1736	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2719714889747	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCAGTCTCCTCCCCA	-9	True	NA	80	True	TATAAA	-18	NA	112206694	112343094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112206808_112286876_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083_112330217_112336103_112336172_112337729_112337827_112339842_112339886_112340871_112341047_112342560
transcript_1692.known	chr1	+	3000	6	FSM	ENSG00000157916.20	ENST00000378513.7	3000	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	419.180343050578	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTTCTCAACTGTATG	6371	False	NA	30	True	AATAAA	-22	NA	2391774	2405442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2400856_2400936_2402206_2402343_2403034
transcript_169202.known	chr7	+	1075	7	FSM	ENSG00000198839.10	ENST00000450657.1	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	13.7406533889606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATTTGGATATCCAC	-3	True	NA	NA	False	NA	NA	NA	112206700	112330474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112206808_112286872_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083
transcript_169204.known	chr7	+	2218	2	FSM	ENSG00000198839.10	ENST00000421043.5	2218	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTATGTGTAGCATCT	-7	True	NA	NA	False	NA	NA	NA	112206696	112288979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112206808_112286872
transcript_169205.known	chr7	+	1834	13	FSM	ENSG00000006652.15	ENST00000005558.8	1834	13	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	87.7114904419914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAAGACTATTTTCTA	-16	True	NA	NA	False	NA	NA	NA	112423143	112475527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112423433_112450507_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_169214.known	chr7	+	2364	13	FSM	ENSG00000006652.15	ENST00000674915.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	115.098599035783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAAAGATTTTTTTCC	1	True	NA	-15	True	NA	NA	NA	112450459	112476163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112470898_112471034_112472218_112472348_112472765_112472862_112475429
transcript_169217.known	chr7	+	3269	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	48.8157270417185	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTGTTTTTGAG	1	True	NA	21	True	AATAAA	-35	NA	112450459	112477203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_169221.known	chr7	+	3397	12	FSM	ENSG00000006652.15	ENST00000535603.5	3397	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	95.7589950029079	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	140	False	NA	18	True	AATAAA	-32	NA	112452057	112477200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112452512_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_169226.known	chr7	+	1938	4	FSM	ENSG00000006652.15	ENST00000429071.5	1938	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	10.7082522694727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTAATAAATGTATT	-1	True	NA	NA	False	NA	NA	NA	112450457	112458336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913
transcript_169227.known	chr7	-	7276	5	FSM	ENSG00000146802.13	ENST00000312814.11	7276	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	18.7932833746528	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCATTAATTTTTAATAT	-2	True	NA	NA	False	ATTAAA	-29	NA	112790393	112762376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112790159
transcript_169228.known	chr7	-	3940	5	FSM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	10.779030568655	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-22	True	NA	-2	True	ATTAAA	-20	NA	112939875	112819146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
transcript_169231.known	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	168.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-6	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_113117608_113118067_113118162_113118439
transcript_169232.known	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	54.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	0	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_113117608_113118067_113118162_113118527
transcript_169236.known	chr7	+	2953	3	FSM	ENSG00000105971.15	ENST00000222693.5	2953	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGTATTGCTTTT	10	True	NA	16	True	AATAAA	-16	NA	116499737	116508541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116499932_116500259_116500448_116505970
transcript_169238.known	chr7	+	2736	7	FSM	ENSG00000135269.18	ENST00000358204.9	2736	7	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	19.3254294188311	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	1	True	NA	NA	False	AATAAA	-17	NA	116210538	116258783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_169246.known	chr7	+	2456	3	FSM	ENSG00000105974.13	ENST00000341049.7	2456	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	49.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	0	True	NA	16	True	AATAAA	-18	NA	116525035	116561179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116525093_116526524_116526690_116558945
transcript_169249.known	chr7	+	1653	3	FSM	ENSG00000105974.13	ENST00000451122.5	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	55	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCTCAACTGCCTA	8	True	NA	NA	False	AAAAAG	-8	NA	116525008	116559636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116525806_116526524_116526690_116558945
transcript_16925.known	chr1	-	8319	7	FSM	ENSG00000169905.13	ENST00000609928.6	8319	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	28.5233822211415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCAGCGGACTGATT	-1	True	NA	-13	True	AATAAA	-14	NA	179877803	179839975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179865435_179865855_179877238_179877374_179877692
transcript_169251.known	chr7	+	845	3	FSM	ENSG00000105974.13	ENST00000393468.1	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	50.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTTATTTGCATGT	469	False	NA	87	True	TTTAAA	-21	NA	116526276	116559513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116526389_116526524_116526690_116558945
transcript_169253.known	chr7	+	2628	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	485	False	NA	13	True	AATAAA	-15	NA	116526292	116561176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116526690_116558945
transcript_169256.known	chr7	+	2652	3	FSM	ENSG00000105974.13	ENST00000405348.6	2652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	-2	True	NA	16	True	AATAAA	-18	NA	116525530	116561179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116525784_116526524_116526690_116558945
transcript_169258.nic	chr7	+	1427	2	ISM	ENSG00000105976.16	ENST00000318493.11	6876	21	-114	98376	-114	402	5prime_fragment	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATCCACAAAGAAGGAAG	289	False	NA	NA	False	NA	NA	NA	116672081	116700001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_116672578_116699070
transcript_169262.known	chr7	+	1214	10	FSM	ENSG00000198898.15	ENST00000426421.5	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	454.283318352472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATGTCTTTTGGTTTA	19	True	NA	NA	False	NA	NA	NA	116862599	116918188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910212_116910312_116912068_116912141_116916059_116916123_116917726
transcript_169266.known	chr7	+	5068	10	FSM	ENSG00000198898.15	ENST00000361183.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	70.8895855068524	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGTTCATTGCAAATG	6	True	NA	NA	False	ATTAAA	-18	NA	116862586	116922049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910232_116910312_116912068_116912141_116916059_116916123_116917726
transcript_169274.known	chr7	+	621	2	FSM	ENSG00000198898.15	ENST00000461878.5	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCATGCT	22	True	NA	NA	False	NA	NA	NA	116862602	116888699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126
transcript_169277.known	chr7	+	2899	16	FSM	ENSG00000004866.22	ENST00000265437.9	2899	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	23.1932940499811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTAGTGGTCTCTGC	-5	True	NA	NA	False	AATAAA	-19	NA	116953326	117223907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117222860
transcript_169278.known	chr7	+	2093	16	FSM	ENSG00000004866.22	ENST00000323984.8	2093	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	20.9799904671094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGGGAACCTGGATC	3	True	NA	8	True	AATAAA	-19	NA	116953500	117230176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_169284.known	chr7	+	2110	15	FSM	ENSG00000004866.22	ENST00000393451.7	2110	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	23.0111995802576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTATCCTCCTGTGT	10	True	NA	-65	True	AATAAA	-21	NA	116953341	117230103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_169288.known	chr7	+	2114	14	FSM	ENSG00000004866.22	ENST00000393446.6	2114	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	36.6614125695892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAATCATTTGTATCCT	215	False	NA	-72	True	AATAAA	-14	NA	116953237	117230096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117221922_117222063_117229761
transcript_169289.known	chr7	+	1694	13	FSM	ENSG00000004866.22	ENST00000446490.5	1694	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	36.8611320438691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCATTTGTATCCTCCT	1	True	NA	-69	True	AATAAA	-17	NA	116953520	117230099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117229761
transcript_16929.known	chr1	-	7067	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACTGTCATACATTTG	3	True	NA	-11	True	AATAAA	-37	NA	179877799	179859029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179865855_179877238_179877374_179877692
transcript_169290.known	chr7	-	5904	23	FSM	ENSG00000077063.11	ENST00000160373.8	5904	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	11.2991808377115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGCTGTACTTTTTA	-8	True	NA	-3	True	AATAAA	-18	NA	117873441	117710650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
transcript_169293.known	chr7	-	5517	23	FSM	ENSG00000077063.11	ENST00000441556.5	5517	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	15.662768403114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATCTTTCTTACAAAA	4	True	NA	-16	True	AATAAA	-2	NA	117873429	117710862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791290_117792782_117810764_117810990_117861208_117861317_117873334
transcript_169296.nic	chr7	-	3936	13	NIC	ENSG00000077063.11	novel	530	4	NA	NA	339	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.0983673684556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGTTTCCATAGACT	NA	False	NA	-22	True	AATAAA	-25	NA	117873800	117755371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_117755575_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
transcript_169300.known	chr7	-	570	4	FSM	ENSG00000077063.11	ENST00000454375.5	570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.6637929966641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCTCTCAGGCAAAGT	-2	True	NA	-65	True	NA	NA	NA	117872220	117792661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_117792782_117810764_117810990_117861208_117861317_117872103
transcript_169301.nic	chr7	-	773	4	ISM	ENSG00000077063.11	ENST00000441556.5	5517	23	-149	81723	-137	0	5prime_fragment	FALSE	canonical	3	65	junction_3	8.05536398239638	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACGAATGAATTAGAA	149	False	NA	11	True	NA	NA	NA	117873578	117792585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_117792782_117810764_117810990_117861208_117861317_117873334
transcript_169302.known	chr7	+	12384	4	FSM	ENSG00000128534.8	ENST00000249299.7	12384	4	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_3	53.1308656892478	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAATGTCCATGTTTTT	-3	True	NA	NA	False	AATAAA	-18	NA	118184163	118204035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_118184255_118185653_118185695_118188277_118188406_118191911
transcript_169303.nic	chr7	+	576	4	NIC	ENSG00000128534.8	novel	1920	3	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	312.463686779049	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	7	True	NA	-7	True	ATTAAA	-29	NA	118184133	118192164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_118184281_118185646_118185695_118188277_118188406_118191911
transcript_169304.known	chr7	+	1920	3	FSM	ENSG00000128534.8	ENST00000422760.1	1920	3	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_2	60.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	29	False	NA	-7	True	ATTAAA	-29	NA	118184155	118192164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_118185695_118188277_118188406_118191911
transcript_169305.known	chr7	+	4030	3	FSM	ENSG00000128534.8	ENST00000424702.1	4030	3	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	51	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTTTTTTTTT	17	True	NA	-16	True	ATTAAA	-20	NA	118184143	118192155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_118184255_118185653_118185695_118188277
transcript_169306.known	chr7	+	5830	6	FSM	ENSG00000184408.10	ENST00000331113.9	5830	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_4	4.35430821141545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACTGTTGCCCTATTT	18	True	NA	10	True	AATAAA	-28	NA	120273174	120750337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120275748_120732902_120733066_120741533_120741630_120742509_120742603_120745779_120746028_120747680
transcript_169309.known	chr7	-	2585	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	16.5788160873189	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-37	True	NA	-2	True	AATAAA	-18	NA	120858144	120787319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_16931.known	chr1	+	3397	10	FSM	ENSG00000143337.19	ENST00000435319.8	3397	10	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	23.3428552000155	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTTATAAACTTAATGA	-4	True	NA	13	True	AATAAA	-26	NA	179882695	179920077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997_179914055_179917451
transcript_169313.nnic	chr7	-	731	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-14	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	84.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	164	False	NA	-15	True	AATAAA	-19	NA	120858158	120855125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_120855382_120856697_120856834_120857819
transcript_169314.known	chr7	+	3749	12	FSM	ENSG00000071243.16	ENST00000315870.10	3749	12	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	25.1323768003817	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAGTGTTTGATAA	-9	True	NA	12	True	AATAAA	-22	NA	120950776	120977216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_169316.known	chr7	+	1718	11	FSM	ENSG00000071243.16	ENST00000427726.5	1718	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	50.0779392547257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGCTTCTAAAAAGAA	-1	True	NA	NA	False	TATAAA	-22	NA	120950784	120975290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_169317.known	chr7	+	1222	5	FSM	ENSG00000071243.16	ENST00000339121.9	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	67.2992384800898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATTCATCTC	NA	False	NA	8	True	CATAAA	-20	NA	120950762	120956980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120956159
transcript_169318.known	chr7	+	1723	4	FSM	ENSG00000071243.16	ENST00000445699.5	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	9.17726659862414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTATTCATC	9	True	NA	6	True	CATAAA	-18	NA	120950794	120956978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558
transcript_169323.known	chr7	-	2455	10	FSM	ENSG00000196937.11	ENST00000359943.8	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_6	81.2346091785703	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGGTTTTGCT	21	True	NA	-27	True	AATAAA	-28	NA	121396308	121348877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_121350551_121351142_121351270_121360042_121360128_121362896_121362948_121364129_121364189_121371299_121371424_121372109_121372140_121378909_121379015_121382956_121383011_121396161
transcript_169329.known	chr7	+	8103	30	FSM	ENSG00000106278.12	ENST00000393386.7	8103	30	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_12	102.93120198681	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	0	True	NA	17	True	AATAAA	-19	NA	121873160	122062036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_169332.known	chr7	+	4627	29	FSM	ENSG00000106278.12	ENST00000449182.1	4627	29	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	123.309812865723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATATCATTAACAATGT	20	True	NA	-80	True	NA	NA	NA	121873360	122061361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_169340.nic	chr7	+	1851	12	ISM	ENSG00000106278.12	ENST00000449182.1	4627	29	-342	50945	-70	-2896	5prime_fragment	FALSE	canonical	3	275	junction_3	30.9702603281501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCCAGATTTCTACCA	NA	False	NA	NA	False	NA	NA	NA	121873018	122010416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333
transcript_169347.nic	chr7	+	1762	2	ISM	ENSG00000106278.12	ENST00000471837.1	568	3	-1	37504	-1	-37504	5prime_fragment	FALSE	canonical	3	329	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAAGCCAGGTGTGGTG	-1	True	NA	NA	False	NA	NA	NA	121873159	121929519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_121873558_121928155
transcript_16935.known	chr1	-	989	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATCCATTATTTTTA	416	False	NA	NA	False	ATTAAA	-20	NA	179882595	179881606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179881600_179882600
transcript_169350.known	chr7	-	5774	24	FSM	ENSG00000008311.16	ENST00000679511.1	5774	24	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_23	1717.62972698338	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	24	True	NA	-1	True	NA	NA	NA	122144239	122073582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
transcript_169353.known	chr7	-	4963	24	FSM	ENSG00000008311.16	ENST00000681434.1	4963	24	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_12	1721.77142371999	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTAAATTAAAATTAAAA	10	False	NA	NA	False	AATAAA	-35	NA	122144297	122074494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122082787_122082892_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_169364.known	chr7	-	5728	23	FSM	ENSG00000008311.16	ENST00000679847.1	5728	23	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	1738.32808734606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	9	True	NA	-1	True	NA	NA	NA	122144254	122073582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_169381.nnic	chr7	-	1410	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	0	-41823	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGCCTGAAGTTTGA	9	True	NA	-1	True	ATTAAA	-23	NA	122144254	122142502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_122143819_122144160
transcript_169382.nnic	chr7	-	767	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	0	-42466	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGCACTTTGGTGTTT	9	True	NA	-16	True	ATTAAA	-16	NA	122144254	122143145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_122143819_122144160
transcript_169383.known	chr7	-	4519	25	FSM	ENSG00000008311.16	ENST00000679864.1	4519	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1710.01125727289	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGCAACACAGTGAAACT	7	False	NA	NA	False	NA	NA	NA	122144300	122064582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122064651_122074973_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_16939.known	chr1	+	2519	13	FSM	ENSG00000116260.17	ENST00000367600.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	202.566175744016	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGTTCTTTAAC	20	False	NA	30	True	AATAAA	-19	NA	180154896	180198034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196600_180197332
transcript_169395.nnic	chr7	-	2389	5	NNC	ENSG00000128610.12	novel	2435	4	NA	NA	-30	0	intron_retention	FALSE	canonical	2	5	junction_4	32.6907861636884	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	6118	False	NA	NA	False	AATAAA	-31	NA	122304780	122301302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122304512_122304587
transcript_169399.nnic	chr7	-	2390	5	NNC	ENSG00000128610.12	novel	2435	4	NA	NA	-2729	0	intron_retention	FALSE	canonical	2	3	junction_4	33.4990671511909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	9867	False	NA	NA	False	AATAAA	-31	NA	122307479	122301302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122304512_122307285
transcript_169400.nic	chr7	-	2953	5	NIC	ENSG00000128610.12	novel	2435	4	NA	NA	-250	0	intron_retention	FALSE	canonical	2	57	junction_3	13.6106575888162	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	6405	False	NA	NA	False	AATAAA	-31	NA	122310941	122301302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122304512_122310184
transcript_169409.known	chr7	-	2435	4	FSM	ENSG00000128610.12	ENST00000442488.7	2435	4	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_3	13.7194104181711	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	1	True	NA	NA	False	AATAAA	-31	NA	122304750	122301302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636
transcript_16941.nic	chr1	+	2911	13	NIC	ENSG00000116260.17	novel	2519	13	NA	NA	-91	0	combination_of_known_junctions	TRUE	canonical	3	76	junction_12	183.164316029806	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTGTTAAGGCAAGC	NA	False	NA	12	True	AATAAA	-1	NA	180154777	180198016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196891_180197332
transcript_169412.known	chr7	-	4308	28	FSM	ENSG00000081803.17	ENST00000412584.6	4308	28	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	14.8188883288577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTCGTATCCTTGTTAA	-1	True	NA	NA	False	NA	NA	NA	122886458	122319745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122386294_122386310_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
transcript_169416.known	chr7	-	6065	30	FSM	ENSG00000081803.17	ENST00000313070.11	6065	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	37.3834773094099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCATCTCCAAATAATGC	-5	True	NA	0	True	AATAAA	-20	NA	122886759	122318424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122387025_122387174_122388582_122388739_122393195_122393316_122393440_122393583_122407539_122407697_122416060_122416165_122436359_122436381_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122480851_122480861_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
transcript_169419.known	chr7	-	1803	7	FSM	ENSG00000128609.16	ENST00000467117.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	830.574449803668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCGCCTTCCTAGCTC	13	True	NA	-32	True	AATAAA	-9	NA	123557804	123541044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_169420.known	chr7	-	5268	6	FSM	ENSG00000128609.16	ENST00000676614.1	5268	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	917.998605663429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTATTATGATCCAAAT	13	True	NA	NA	False	AATAGA	-33	NA	123557804	123537419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_169421.known	chr7	-	5496	5	FSM	ENSG00000128609.16	ENST00000355749.7	5496	5	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_4	332.615017700644	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	-1	True	NA	NA	False	TATAAA	-18	NA	123557818	123536996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_169423.known	chr7	-	1504	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	946.236052297029	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	348	False	NA	-17	True	AATAAA	-24	NA	123557904	123541029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
transcript_169425.known	chr7	-	2802	2	FSM	ENSG00000128609.16	ENST00000490618.1	2802	2	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGATA	-5	True	NA	NA	False	AAAAAG	-1	NA	123557822	123554694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123557449_123557774
transcript_169426.known	chr7	-	1429	6	FSM	ENSG00000128609.16	ENST00000378795.9	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	978.360260844644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTTAAGGTTAAACAAAAA	13	True	NA	-64	True	AAAACA	-33	NA	123557804	123541076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123544734_123544762_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_169428.known	chr7	-	4363	11	FSM	ENSG00000106299.8	ENST00000223023.5	4363	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_7	25.1761792176653	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAATGTGTTTCATGT	-23	True	NA	-30	True	AATAAA	-22	NA	123749003	123681942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123684581_123689041_123689151_123692346_123692868_123694714_123694869_123695822_123695866_123696578_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_169429.nic	chr7	-	1533	6	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-701	14702	-701	-14702	5prime_fragment	FALSE	canonical	3	233	junction_2	26.0353605698097	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGGGAAAAGCTAAAA	NA	False	NA	-8	True	AATAGA	-45	NA	123749704	123696644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_169430.nic	chr7	-	721	4	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-65	24383	-65	-24383	5prime_fragment	FALSE	canonical	3	256	junction_1	20.3688214899363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCGAAAAGCAGTTACAGA	10	True	NA	NA	False	AATGAA	-16	NA	123749068	123706325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_123706374_123706739_123706827_123709088_123709224_123748617
transcript_169431.known	chr7	-	5298	2	FSM	ENSG00000170775.3	ENST00000303921.3	5298	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAACAACAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	124765792	124743884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124747344_124763953
transcript_169436.known	chr7	-	3924	19	FSM	ENSG00000128513.16	ENST00000357628.8	3924	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_18	11.3382342344633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	12	True	NA	-4	True	AATAAA	-18	NA	124929825	124822385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_169437.known	chr7	-	2877	19	FSM	ENSG00000128513.16	ENST00000668382.1	2877	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_18	13.9262829938463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTAATAAAAGTGGTCAG	19	True	NA	30	True	NA	NA	NA	124929944	124823548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
transcript_16944.known	chr1	+	9276	12	FSM	ENSG00000116260.17	ENST00000367602.8	9276	12	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_6	77.077721856653	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGATGCAATTTTTTTT	-8	True	NA	NA	False	AATAAA	-43	NA	180154868	180204030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261
transcript_169441.known	chr7	-	3091	19	FSM	ENSG00000128513.16	ENST00000664366.1	3091	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	16.86877457184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAATGTTAATGACTT	161	False	NA	-26	True	AATAAA	-10	NA	124929802	124823528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929457
transcript_169444.known	chr7	-	3950	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	15.2204106269831	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTGGTTTATTGTG	-20	True	NA	-5	True	AATAAA	-17	NA	124929983	124822386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_169471.nnic	chr7	+	905	2	NIC	ENSG00000197462.3	novel	837	5	NA	NA	-8	-8972	combination_of_known_splicesites	FALSE	canonical	3	78	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATGCTTTACCAGGAG	-1	True	NA	NA	False	ATTAAA	-26	NA	125917862	125924860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_125918119_125924211
transcript_169473.known	chr7	-	3704	11	FSM	ENSG00000179603.18	ENST00000339582.7	3704	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGTTTCGTTCCAGT	-3	True	NA	0	True	AATAAA	-20	NA	127252941	126438597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_126439169_126446125_126446373_126532951_126533888_126609361_126609499_126769864_126770066_126902541_126902680_126903971_126904127_126904547_126904684_127106495_127106713_127242694_127243516_127252796
transcript_169474.known	chr7	-	3850	11	FSM	ENSG00000179603.18	ENST00000358373.7	3850	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.49666295470958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTGCAAATGTTGAG	593	False	NA	-17	True	AATAAA	-3	NA	127252381	126438614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_126439169_126446070_126446373_126532951_126533888_126609361_126609499_126769864_126770066_126902541_126902680_126903971_126904127_126904547_126904684_127106495_127106713_127242694_127243516_127252128
transcript_169478.known	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_4	126.173531297178	4256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	6	True	NA	27	True	AATAAA	-17	NA	127588410	127591700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
transcript_169481.known	chr7	+	566	5	FSM	ENSG00000004059.11	ENST00000489673.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_4	140.268492541982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCCTGCCTCTTGAGGG	8	True	NA	NA	False	NA	NA	NA	127588412	127591112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962
transcript_169482.known	chr7	+	1509	5	FSM	ENSG00000004059.11	ENST00000463733.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_3	125.220555421225	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCTGTGGTTTGTAC	-19	True	NA	8	True	NA	NA	NA	127588385	127591681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127590138_127590962_127591089_127591212
transcript_169492.known	chr7	-	4128	2	FSM	ENSG00000179562.3	ENST00000321407.3	4128	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGTTCCTTAATAG	-1	True	NA	-1	True	ATTAAA	-15	NA	127585596	127580627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_127583310_127584150
transcript_169497.known	chr7	+	3448	24	FSM	ENSG00000197157.11	ENST00000354725.8	3448	24	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_16	149.752322299277	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTATTGATCACAGTGT	-3	True	NA	31	True	AATAAA	-20	NA	127652193	128092593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127652452_127686612_127686763_127694827_127694949_127698874_127698954_127701162_127701324_127702434_127702527_127703164_127703324_127704838_127704946_127707556_127707648_127721286_127721401_127807483_127807574_127844323_127844425_127887901_127888013_127904746_127904820_127929187_127929330_127990946_127991057_128074501_128074691_128081359_128081502_128084723_128084848_128085710_128085781_128086937_128087052_128089488_128089693_128091836_128091882_128091992
transcript_169527.known	chr7	+	793	2	FSM	ENSG00000197157.11	ENST00000463020.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	1795	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAGGATATATAGTGAAA	-3	True	NA	NA	False	NA	NA	NA	127652193	127687147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127652452_127686612
transcript_169529.known	chr7	-	15507	19	FSM	ENSG00000106344.8	ENST00000223073.6	15507	19	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_10	26.6468097365482	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGCAGCATGATTTA	-38	True	NA	NA	False	AATAAA	-18	NA	128343908	128297684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_169536.nic	chr7	-	810	7	ISM	ENSG00000106344.8	ENST00000223073.6	15507	19	-11	38287	-11	-425	5prime_fragment	FALSE	canonical	3	178	junction_2	20.3695033485519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAAGAAAACGATGA	NA	False	NA	0	True	AAAAAG	-25	NA	128343919	128335971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_169537.nic	chr7	-	392	2	ISM	ENSG00000106344.8	ENST00000478061.5	932	7	-45	4099	-11	-1364	5prime_fragment	FALSE	canonical	3	203	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAAAATGGTGAGTTTC	NA	False	NA	NA	False	AAGAAA	-27	NA	128343919	128339643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_128339792_128343675
transcript_169539.known	chr7	-	2862	17	FSM	ENSG00000106348.18	ENST00000626419.2	2862	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	103.335618254308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGCCTCCACTATCCT	NA	False	NA	-18	True	AATAAA	-11	NA	128410252	128392292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400537_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409288_128409353_128409440_128409485_128409755
transcript_169543.nic	chr7	-	2688	16	NIC	ENSG00000106348.18	novel	2611	17	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_10	95.3882359390064	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	-9	True	NA	-26	True	AATAAA	-3	NA	128409995	128392300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409288_128409485_128409755
transcript_169545.known	chr7	-	2479	15	FSM	ENSG00000106348.18	ENST00000348127.10	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.5726000421422	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	4	True	NA	-26	True	AATAAA	-3	NA	128409982	128392300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409755
transcript_169551.known	chr7	-	1888	14	FSM	ENSG00000106348.18	ENST00000470772.5	1888	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	65.7756632032128	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTCTTGCTGCAGCCT	9	True	NA	NA	False	NA	NA	NA	128405942	128392738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400537_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_169552.nic	chr7	-	2407	14	NIC	ENSG00000106348.18	novel	2479	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	87.4389051291101	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	NA	False	NA	-26	True	AATAAA	-3	NA	128410009	128392300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128409755
transcript_169553.known	chr7	-	2295	14	FSM	ENSG00000106348.18	ENST00000469328.5	2295	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	87.7532851422352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTATGCCCTGTC	4121	False	NA	-2	True	AATAAA	-27	NA	128405865	128392276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400205_128400332_128400537_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_169556.known	chr7	-	2283	13	FSM	ENSG00000106348.18	ENST00000496200.5	2283	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	66.3749869219489	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGTATGCCCTGT	3	True	NA	-3	True	AATAAA	-26	NA	128405948	128392277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128401014_128401117_128403705_128403755_128405766
transcript_169564.known	chr7	-	2580	16	FSM	ENSG00000106348.18	ENST00000354269.9	2580	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	95.5180960167583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGTATGCCCTGT	4	True	NA	-3	True	AATAAA	-26	NA	128409982	128392277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409288_128409367_128409755
transcript_169567.known	chr7	+	5841	9	FSM	ENSG00000165055.16	ENST00000262432.13	5841	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	99.0680794958699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	0	True	NA	5	True	AATAAA	-18	NA	128476747	128506602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_169575.known	chr7	+	662	4	FSM	ENSG00000240758.2	ENST00000493710.1	662	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	156.74253482135	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAACTACTTTTTCATA	37	False	NA	NA	False	AATGAA	-26	NA	128455936	128469197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128456024_128457200_128457300_128466562_128466686_128468844
transcript_169578.known	chr7	+	1364	2	FSM	ENSG00000135245.10	ENST00000257696.5	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	12	True	NA	46	True	AATAAA	-19	NA	128455877	128458418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128456024_128457200
transcript_169580.known	chr7	+	785	2	FSM	ENSG00000135245.10	ENST00000435296.2	785	2	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGCCTGTTTAATGCA	-17	True	NA	NA	False	AAAAAG	-5	NA	128455848	128457924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128455910_128457200
transcript_169582.known	chr7	+	1590	8	FSM	ENSG00000165055.16	ENST00000482555.5	1590	8	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	105.146739058774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGTTGATGCTGG	NA	False	NA	0	True	AATAAA	-12	NA	128476728	128502126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_169583.known	chr7	+	1370	2	FSM	ENSG00000135245.10	ENST00000481454.1	1370	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	3	True	NA	46	True	AATAAA	-19	NA	128455902	128458418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128456701_128457846
transcript_169588.known	chr7	+	1574	8	FSM	ENSG00000135248.16	ENST00000485070.5	1574	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	8.64728340024089	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAATGTTTTCT	-3	True	NA	NA	False	AGTAAA	-10	NA	128709060	128731611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128709208_128713922_128714133_128716812_128716998_128718891_128719084_128723196_128723319_128726833_128726872_128729901_128730070_128731099
transcript_169595.known	chr7	+	2572	8	FSM	ENSG00000128595.17	ENST00000479257.5	2572	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	961.909856186416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAGGAAAAATACA	1	True	NA	NA	False	NA	NA	NA	128739403	128769936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_169598.known	chr7	+	4225	8	FSM	ENSG00000128595.17	ENST00000542996.6	4225	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1040.30335057833	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	NA	False	NA	17	True	AATAAA	-18	NA	128739291	128771477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_1696.known	chr1	-	1941	6	FSM	ENSG00000157911.11	ENST00000507596.5	1941	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.246400380931	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTAACTCCAGCAAAAT	5	True	NA	-52	True	NA	NA	NA	2412540	2404837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2405829_2406483_2406620_2406719_2406896_2408451_2408859_2410370_2410452_2412390
transcript_169602.known	chr7	+	5266	7	FSM	ENSG00000128595.17	ENST00000249364.9	5266	7	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_2	292.981607310463	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTTTGGAGCAACT	-6	True	NA	21	True	AATAAA	-14	NA	128739358	128773400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_169608.known	chr7	+	2438	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_3	870.227556447163	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	-2	True	NA	NA	False	NA	NA	NA	128739362	128770576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_169612.known	chr7	+	3210	6	FSM	ENSG00000128595.17	ENST00000535011.6	3210	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	822.243905419797	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	NA	False	NA	17	True	AATAAA	-18	NA	128739291	128771477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128769062
transcript_169631.known	chr7	+	711	3	FSM	ENSG00000128524.5	ENST00000492758.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGGGTTGGGTGCTGG	34	False	NA	28	True	ATTAAA	-20	NA	128862903	128865844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128863063_128865119_128865204_128865376
transcript_169632.known	chr7	-	4152	11	FSM	ENSG00000135253.16	ENST00000676619.1	4152	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.90842298052804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAAACCCATCCTTATC	4078	False	NA	NA	False	NA	NA	NA	128880103	128867084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128869079_128869162_128869539_128869955_128870733_128872575_128872731_128873013_128873074_128874315_128874449_128874523_128874611_128878557_128878723_128879521_128879624_128879717_128879830_128879912
transcript_169634.known	chr7	+	678	2	FSM	ENSG00000128524.5	ENST00000249289.5	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1767	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTGGGTGCTGGAAA	-14	True	NA	31	True	ATTAAA	-23	NA	128862855	128865847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128863063_128865376
transcript_169635.known	chr7	-	5108	40	FSM	ENSG00000135253.16	ENST00000610776.5	5098	40	-10	0	0	0	multi-exon	TRUE	canonical	1	3	junction_15	7.04097148278796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCCTTGTGTGTGTGTG	NA	False	NA	-5	True	AGTAAA	-18	NA	128910719	128876864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128877312_128877483_128877791_128878557_128878723_128879521_128879624_128879717_128879830_128879912_128880086_128880385_128880529_128880618_128880722_128880996_128881086_128881625_128881726_128881936_128882017_128884001_128884123_128884780_128884864_128885096_128885271_128886463_128886558_128886654_128886738_128886875_128886967_128887214_128887301_128888862_128889040_128890342_128890514_128890904_128891097_128891184_128891279_128891450_128891534_128891645_128891820_128892513_128892608_128892687_128892795_128892868_128893022_128893237_128893320_128893390_128893477_128893805_128893900_128893975_128894056_128894199_128894294_128902776_128902860_128903726_128903821_128904055_128904139_128906278_128906364_128907100_128907178_128907263_128907454_128908425_128908569_128910600
transcript_169636.known	chr7	-	2774	21	FSM	ENSG00000135253.16	ENST00000612224.1	2774	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	4.55274642386329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128910719	128889946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128890514_128890904_128891097_128891184_128891279_128891450_128891534_128891645_128891820_128892513_128892608_128892687_128892795_128892868_128893022_128893237_128893320_128893390_128893477_128893805_128893900_128893975_128894056_128894199_128894294_128902776_128902860_128903726_128903821_128904055_128904139_128906278_128906364_128907100_128907178_128907263_128907454_128908425_128908569_128910600
transcript_169642.known	chr7	+	2899	9	FSM	ENSG00000128604.20	ENST00000357234.10	2899	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	2.69258240356725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGGTCTTCGTT	-29	True	NA	NA	False	AATAAA	-20	NA	128937926	128950038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128938050_128942070_128942277_128945844_128946035_128946500_128946563_128947022_128947057_128947229_128947536_128947728_128948122_128948209_128948329_128948572
transcript_169643.known	chr7	+	2786	9	FSM	ENSG00000128604.20	ENST00000402030.6	2786	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.35177191944798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCAGCCTCGGGTCTTC	33	True	NA	NA	False	AATAAA	-17	NA	128937988	128950035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128938050_128942070_128942277_128945844_128946035_128946500_128946563_128947022_128947057_128947277_128947536_128947728_128948122_128948209_128948329_128948572
transcript_169645.nic	chr7	+	3085	9	NIC	ENSG00000128604.20	novel	2899	9	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_1	3.03108891324554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCAGCCTCGGGTCTTC	-22	True	NA	NA	False	AATAAA	-17	NA	128937933	128950035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_128938246_128942070_128942277_128945844_128946035_128946500_128946563_128947022_128947057_128947229_128947536_128947728_128948122_128948209_128948329_128948572
transcript_169646.known	chr7	+	2749	9	FSM	ENSG00000128604.20	ENST00000249375.8	2749	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.60338382634989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTACCCAGCCTCGGG	197	False	NA	NA	False	AATAAA	-12	NA	128938216	128950030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128938246_128942070_128942277_128945844_128946035_128946500_128946563_128947022_128947057_128947277_128947536_128947728_128948122_128948209_128948329_128948572
transcript_16965.known	chr1	-	1293	8	FSM	ENSG00000230124.8	ENST00000367595.4	1293	8	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_4	61.9693801940333	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTCTCAGCAATTC	5	True	NA	-20	True	AATAAA	-22	NA	180502577	180288229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_180288518_180314691_180314723_180397515_180397606_180413365_180413472_180430179_180430263_180492268_180492366_180495460_180495526_180502044
transcript_169655.known	chr7	-	3585	24	FSM	ENSG00000064419.14	ENST00000482320.5	3585	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	8.07010867735201	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	70	False	NA	NA	False	AGTAAA	-17	NA	129055093	128955087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129041556_129041718_129054650
transcript_169658.known	chr7	-	4345	23	FSM	ENSG00000064419.14	ENST00000265388.10	4345	23	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_20	4.49149793710386	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCTTTGTTTTTA	10	True	NA	-6	True	AATAAA	-15	NA	129055111	128954184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_169663.known	chr7	-	4514	23	FSM	ENSG00000064419.14	ENST00000627585.2	4514	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	6.56562548555192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTGTTTTTACTTTC	NA	False	NA	-1	True	AATAAA	-20	NA	129055173	128954179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990203_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_169669.known	chr7	-	3283	22	FSM	ENSG00000064419.14	ENST00000471234.5	3283	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	6.70397722681069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	19	False	129055163	NA	False	AGTAAA	-17	NA	129055144	128955087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_16968.nic	chr1	-	944	3	ISM	ENSG00000230124.8	ENST00000367595.4	1293	8	-249	204039	128	-204039	5prime_fragment	FALSE	canonical	3	572	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGACTTAATGATTATAA	26	True	NA	NA	False	AATATA	-42	NA	180502826	180492268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_180492366_180495460_180495526_180502044
transcript_169693.known	chr7	+	3977	12	FSM	ENSG00000128602.11	ENST00000249373.8	3977	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	14.6930016511488	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGTGTTTTTCCTT	-2	True	NA	15	True	AATAAA	-16	NA	129188632	129213545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129189483_129203383_129203590_129205202_129205413_129205609_129205783_129206149_129206370_129206463_129206588_129208758_129208852_129209288_129209398_129210362_129210549_129210964_129211114_129211635_129211771_129212023
transcript_1697.known	chr1	-	2905	6	FSM	ENSG00000157911.11	ENST00000288774.8	2905	6	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_3	113.651044869812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGAGAGTATTTCTTTTC	-19	True	NA	0	True	AGTAAA	-27	NA	2412564	2403963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2405835_2406483_2406620_2406719_2406956_2408451_2408859_2410370_2410452_2412390
transcript_16970.known	chr1	+	5844	6	FSM	ENSG00000121454.6	ENST00000263726.4	5844	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.06939798987516	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATGTGTCTTGCTTTT	-11	True	NA	10	True	AATAAA	-18	NA	180230263	180278984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180230606_180248284_180248457_180266391_180266595_180271379_180271535_180271834_180272007_180274184
transcript_169707.known	chr7	+	5026	17	FSM	ENSG00000158467.17	ENST00000446544.6	5026	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	15.2970585407784	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAAGGGTATTTCTTGT	10	True	NA	4	True	AATAAA	-17	NA	129225049	129430211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129225440_129379640_129379750_129389055_129389200_129389633_129389735_129397221_129397325_129400289_129400385_129403378_129403486_129405096_129405214_129405835_129405900_129406377_129406467_129409475_129409547_129413593_129413689_129422839_129422939_129424873_129424943_129425062_129425142_129426442_129426564_129427038
transcript_169711.known	chr7	+	5116	21	FSM	ENSG00000128578.10	ENST00000249344.7	5116	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	6.71490878567982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTTTAAATTCTTCA	-14	True	NA	NA	False	AATAAA	-25	NA	129434431	129488399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841_129483047_129485578
transcript_169714.known	chr7	+	2866	20	FSM	ENSG00000128578.10	ENST00000435494.2	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	6.03728030346479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGAGTTGTCCCAAAAT	0	True	NA	3	True	AATAAA	-15	NA	129434445	129483631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841
transcript_169719.known	chr7	+	969	2	FSM	ENSG00000240204.3	ENST00000462322.3	969	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCAGCAGTCTGA	-15	True	NA	NA	False	AATAAA	-17	NA	129502530	129512918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129502828_129512246
transcript_169721.nnic	chr7	+	2005	11	NNC	ENSG00000106459.15	novel	3518	11	NA	NA	-27	-20454	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	34.2579917683451	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGCTGATGACAAGGCA	-33	True	NA	NA	False	AATAAA	-26	NA	129611692	129735561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_129611825_129657345_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129735042
transcript_169722.known	chr7	+	3518	11	FSM	ENSG00000106459.15	ENST00000393232.6	3518	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	18.4325798519903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTGGAATTGTTCAT	-6	True	NA	9	True	AATAAA	-19	NA	129611719	129757076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129611825_129657345_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_169726.known	chr7	+	2424	11	FSM	ENSG00000106459.15	ENST00000223190.8	2424	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	13.2230858728211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAATTGCTCGTATAT	30	True	NA	16	True	ATTAAA	-24	NA	129611755	129756015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_169733.known	chr7	-	5162	7	FSM	ENSG00000186591.13	ENST00000355621.8	5162	7	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	28.3063597094363	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGACCTTGATCAATA	-36	True	NA	-3	True	AATAAA	-21	NA	129952960	129830731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_169744.known	chr7	-	535	5	FSM	ENSG00000186591.13	ENST00000473814.6	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	229.155378509866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAAAGCACCTGCTTTT	293	False	NA	NA	False	NA	NA	NA	129952631	129834936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_129835062_129839206_129839336_129879567_129879643_129880894_129880972_129952502
transcript_169746.nic	chr7	-	4185	5	ISM	ENSG00000186591.13	ENST00000472396.5	758	6	-49	14857	-32	2912	5prime_fragment	FALSE	canonical	3	508	junction_1	27.5442825283216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAACACTAAATAACTAATA	NA	False	NA	NA	False	NA	NA	NA	129952992	129854060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_169752.known	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_4	306.463700950047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-11	True	NA	-47	True	NA	NA	NA	130051389	130018325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_169755.known	chr7	-	1889	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	0	0	0	multi-exon	FALSE	canonical	1	253	junction_8	199.077874210069	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	4	True	NA	-13	True	AATAAA	-14	NA	130051374	130018291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_169757.nic	chr7	-	1639	8	NIC	ENSG00000091732.17	novel	1889	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	286.934537083685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-9	True	NA	-13	True	AATAAA	-14	NA	130051387	130018291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130051220
transcript_169762.known	chr7	-	3455	15	FSM	ENSG00000146842.17	ENST00000397622.7	3455	15	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_14	37.3111571648427	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	12	True	NA	-7	True	ATTAAA	-31	NA	130205406	130164712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130178401_130178528_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_169765.known	chr7	-	1961	14	FSM	ENSG00000146842.17	ENST00000473456.5	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	84.1547602256643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCAGTCTTTTTTTT	15	True	NA	NA	False	NA	NA	NA	130205403	130166077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_169769.known	chr7	-	6292	11	FSM	ENSG00000106477.20	ENST00000223208.10	6292	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	11.034491379307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGATCTTTTCTT	6	True	NA	NA	False	AGTAAA	-15	NA	130441016	130393770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_169771.known	chr7	-	2465	11	FSM	ENSG00000106477.20	ENST00000674630.1	2465	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	24.6746833819605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTTCTCGCCACCAA	-24	True	NA	-147	True	NA	NA	NA	130441046	130397551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404639_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_169774.known	chr7	-	2589	10	FSM	ENSG00000106477.20	ENST00000675596.1	2589	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.0631033085738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGTATGAGAAATAA	NA	False	NA	-74	True	NA	NA	NA	130441237	130397478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_169775.known	chr7	-	2541	11	FSM	ENSG00000106477.20	ENST00000676243.1	2541	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	25.4432702300628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTAAGATTTGCCTTAAC	82	False	130441077	NA	False	NA	NA	NA	130441059	130397573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400038_130400255_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_169776.known	chr7	-	1012	10	FSM	ENSG00000106477.20	ENST00000343969.10	1012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.406406388126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	6	True	NA	-9	True	AATAAA	-21	NA	130441016	130398843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_169777.known	chr7	-	2010	7	FSM	ENSG00000106477.20	ENST00000674539.1	2010	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	31.8625520356142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTTCTCGCCACCAA	75	False	130441077	-147	True	NA	NA	NA	130441066	130397551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_169778.known	chr7	-	1272	11	FSM	ENSG00000106477.20	ENST00000675935.1	1272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	25.759658382828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-1	True	NA	-9	True	AATAAA	-21	NA	130441078	130398843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402791_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_169779.known	chr7	-	3134	24	FSM	ENSG00000158623.14	ENST00000425248.5	3134	24	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_13	20.9637368059601	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	-14	True	NA	-13	True	AATAAA	-20	NA	130668748	130506237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130506807_130507273_130507373_130507684_130507824_130508561_130508660_130547673_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_169786.known	chr7	+	2443	12	FSM	ENSG00000106484.16	ENST00000341441.9	2443	12	0	0	0	0	multi-exon	TRUE	canonical	3	1434	junction_1	187.312131776732	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486170	130506292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_169789.nic	chr7	+	2408	12	NIC	ENSG00000106484.16	novel	2443	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_1	494.386722520901	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	-13	True	NA	16	True	AATAAA	-18	NA	130486329	130506292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_169792.known	chr7	+	2646	12	FSM	ENSG00000106484.16	ENST00000223215.10	2646	12	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	409.739667400317	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	-2	True	NA	NA	False	NA	NA	NA	130492084	130506465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_169793.known	chr7	+	2411	12	FSM	ENSG00000106484.16	ENST00000437945.6	2411	12	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_4	575.568407520372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGACTCTGGCTTCC	26	False	NA	12	True	AATAAA	-14	NA	130492112	130506288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498168_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_169795.known	chr7	+	2337	11	FSM	ENSG00000106484.16	ENST00000416162.7	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_8	521.849748490885	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486174	130506292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_169796.known	chr7	+	2473	11	FSM	ENSG00000106484.16	ENST00000427521.6	2473	11	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	682.74754485095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	-7	True	NA	NA	False	NA	NA	NA	130486335	130506465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_169797.nic	chr7	+	2422	11	NIC	ENSG00000106484.16	novel	2646	12	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	253	junction_8	625.781151841441	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	753	False	NA	16	True	AATAAA	-18	NA	130492033	130506292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_169817.known	chr7	+	2448	18	FSM	ENSG00000128585.18	ENST00000458153.5	2448	18	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_5	89.5499319453605	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	13	True	NA	13	True	AATAAA	-25	NA	131327896	131487962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487606
transcript_169823.known	chr7	-	2279	7	FSM	ENSG00000236753.7	ENST00000648242.1	2279	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	8.82546819658248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCACACCATTGCACTCC	29	True	NA	NA	False	NA	NA	NA	131327724	131309468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131310774_131311129_131311224_131321878_131321932_131323364_131323869_131324302_131324426_131326805_131326896_131327614
transcript_169824.known	chr7	-	1497	4	FSM	ENSG00000236753.7	ENST00000444245.6	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCGTCTCTACTAAAA	7	True	NA	NA	False	NA	NA	NA	131327746	131322767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326896_131327614
transcript_169825.known	chr7	-	1510	4	FSM	ENSG00000236753.7	ENST00000454515.6	1510	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	6.54896090146283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCGTCTCTACTAAAAAT	36	True	NA	NA	False	NA	NA	NA	131327717	131322765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326936_131327614
transcript_169826.known	chr7	-	1349	4	FSM	ENSG00000236753.7	ENST00000416220.6	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	8.16496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	29	True	NA	NA	False	TTTAAA	-41	NA	131327724	131322842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324302_131324426_131326805_131326896_131327614
transcript_16983.known	chr1	+	8484	15	FSM	ENSG00000143324.14	ENST00000367590.9	8484	15	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	20.3309355115673	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTGACTGTTTTT	-2	True	NA	60	True	NA	NA	NA	180632021	180890279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180836521_180836717_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_169832.known	chr7	-	578	4	FSM	ENSG00000236753.7	ENST00000447514.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	8.5764535535124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTGCCATCTGACA	NA	False	NA	NA	False	NA	NA	NA	131328222	131323776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324302_131324426_131326805_131326936_131327989
transcript_169833.known	chr7	-	1440	4	FSM	ENSG00000236753.7	ENST00000669897.1	1440	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5303793326209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGAGACCATCCTGGCT	26	True	NA	NA	False	NA	NA	NA	131327727	131322796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324300_131324426_131326805_131326936_131327614
transcript_169836.known	chr7	-	5986	9	FSM	ENSG00000128567.17	ENST00000378555.8	5986	9	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_6	814.95980537386	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-8	True	NA	-17	True	ATTAAA	-16	NA	131556628	131500270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510332_131510827_131511434_131556259
transcript_169839.known	chr7	-	2011	8	FSM	ENSG00000128567.17	ENST00000322985.9	2011	8	0	0	0	0	multi-exon	FALSE	canonical	3	1843	junction_6	268.267913603897	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCTCTTGTAAAATAAC	11	True	NA	-38	True	NA	NA	NA	131556609	131504130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510827_131511434_131556259
transcript_169842.known	chr7	-	6170	7	FSM	ENSG00000128567.17	ENST00000446198.5	6170	7	0	0	0	0	multi-exon	FALSE	canonical	3	1843	junction_5	284.249548030521	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTAGTAGTTTCCTCGGA	-3	True	NA	-8	True	ATTAAA	-25	NA	131556563	131500261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509586_131510827_131511434_131556259
transcript_169846.known	chr7	-	1038	9	FSM	ENSG00000106554.13	ENST00000448878.6	1038	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	524.628380379865	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAAAGAGAAGGGCA	53	False	NA	NA	False	ATTAAA	-34	NA	133082032	132785392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132886973_132886989_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_169850.known	chr7	-	1604	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	1144	junction_6	49.9371032971906	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCATTGTAGCTCCTC	-5	True	NA	-20	True	AATAAA	-17	NA	133082090	132784869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_169859.known	chr7	+	4182	18	FSM	ENSG00000131558.15	ENST00000253861.5	4182	18	0	0	0	0	multi-exon	TRUE	canonical	3	316	junction_10	29.4056464224559	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGTTATTTTTCTT	-7	True	NA	20	True	ATTAAA	-22	NA	133253077	134065761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049_133480139_133630044_133630142_133817324_133817545_133895598_133895736_133917582_133917739_133937890_133938070_133997491_133997634_134004911_134005091_134007675_134007836_134064290
transcript_169861.known	chr7	+	2364	9	FSM	ENSG00000131558.15	ENST00000462055.5	2364	9	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_7	32.7220777916073	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTGGTGAGGGCCTGC	10	True	NA	NA	False	AAAAAG	-22	NA	133253094	133481078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049
transcript_169867.known	chr7	+	568	2	FSM	ENSG00000131558.15	ENST00000481074.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAACTCGTTTATTT	14	True	NA	25	True	AATAAA	-37	NA	133253098	133254018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_133253188_133253539
transcript_169872.known	chr7	-	6676	10	FSM	ENSG00000205060.11	ENST00000378509.9	6676	10	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	27.7306266485449	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTTTTGCCATTATT	29	True	NA	0	True	AATAAA	-19	NA	134316930	134289331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_169874.known	chr7	-	1379	9	FSM	ENSG00000205060.11	ENST00000416907.5	1379	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	108.382424774499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAATTCTGAGTCTC	-26	True	NA	39	True	NA	NA	NA	134316903	134294551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134306671_134306775_134309365_134309480_134316674
transcript_169884.known	chr7	-	1852	10	FSM	ENSG00000085662.14	ENST00000434222.5	1852	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	555.804810751329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGCCTCAAATAAAAAGT	28	True	NA	-62	True	NA	NA	NA	134459102	134442385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447460_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_169888.known	chr7	-	1361	10	FSM	ENSG00000085662.14	ENST00000285930.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_6	137.646084014201	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTGTGAGCTTTG	30	True	NA	-32	True	AATAAA	-15	NA	134459100	134442355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447979_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_169896.known	chr7	-	1930	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_5	145.953759800836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGCCTCAAATAAAAAG	28	True	NA	-63	True	NA	NA	NA	134459102	134442386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_16990.known	chr1	+	4126	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	43.6764597477254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	8	True	NA	7	True	AATAAA	-19	NA	180632031	180886126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_169905.known	chr7	+	2051	4	FSM	ENSG00000172331.12	ENST00000393132.2	2051	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	101.588494536646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTGTTTG	11	True	NA	26	True	AATAAA	-37	NA	134646830	134679813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134646938_134658347_134658669_134661446_134662109_134678852
transcript_169906.known	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	13.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	-2	True	NA	29	True	AATAAA	-40	NA	134646852	134679816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134646938_134661446_134662109_134678852
transcript_169907.nic	chr7	+	1797	2	ISM	ENSG00000172331.12	ENST00000344924.8	1711	3	-50	16708	-8	1367	5prime_fragment	FALSE	canonical	3	247	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTTTCATTCTGCTTTA	-17	True	NA	5	True	AATAAA	-21	NA	134646802	134663108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134646938_134661446
transcript_169908.known	chr7	+	1870	4	FSM	ENSG00000172331.12	ENST00000418040.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	99.5500990568177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAAGTGTCTCCGTGT	-9	True	NA	21	True	AATAAA	-32	NA	134646810	134679808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134646938_134647134_134647260_134661446_134662109_134678852
transcript_169910.known	chr7	+	4114	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	173.474074252811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	9	False	NA	41	True	AATAAA	-21	NA	134779677	134970641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_169912.known	chr7	+	2124	12	FSM	ENSG00000122786.20	ENST00000424922.5	2124	12	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_1	107.809826443075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	15	True	NA	85	True	NA	NA	NA	134891609	134968859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_169918.nic	chr7	+	857	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-155	29147	75	0	5prime_fragment	FALSE	canonical	3	299	junction_3	183.13519596189	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	75	False	NA	37	True	AAAAAG	-16	NA	134779494	134933242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_169919.nic	chr7	+	1025	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-241	29065	-11	82	5prime_fragment	FALSE	canonical	3	299	junction_3	183.13519596189	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	NA	False	NA	5	True	AAGAAA	-9	NA	134779408	134933324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_169921.nic	chr7	+	702	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-236	35617	-26	0	5prime_fragment	FALSE	canonical	3	422	junction_1	171	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	37	True	AAAAAG	-16	NA	134891373	134933242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_169922.nic	chr7	+	784	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-236	35535	-26	82	5prime_fragment	FALSE	canonical	3	422	junction_1	171	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	NA	False	NA	5	True	AAGAAA	-9	NA	134891373	134933324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_169923.known	chr7	+	856	5	FSM	ENSG00000146856.14	ENST00000494702.2	856	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.0779082253011	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	26	True	NA	-34	True	NA	NA	NA	134986554	134995550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134986702_134987874_134987997_134989249_134989311_134993492_134993679_134995210
transcript_169933.nic	chr7	-	1951	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.296241115955	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	1722	False	135170775	-3	True	AATACA	-34	NA	135170747	135165784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168744_135169061_135170275
transcript_169934.nic	chr7	-	1917	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	114.77223822278	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	1633	False	NA	-3	True	AATACA	-34	NA	135170836	135165784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168744_135169061_135170398
transcript_169935.known	chr7	-	1579	4	FSM	ENSG00000122783.17	ENST00000430372.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118.923878547956	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAATACACAAGTGCTA	1674	False	NA	-47	True	AATAAA	-17	NA	135170795	135165828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168744_135169061_135170651
transcript_169939.nic	chr7	-	1787	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	79.2646761734941	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	1722	False	135170775	-3	True	AATACA	-34	NA	135170747	135165784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168785_135169061_135170398
transcript_169940.known	chr7	-	1494	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	77.761744379154	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-1	True	NA	-3	True	AATACA	-34	NA	135170707	135165784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
transcript_169946.nic	chr7	-	1587	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_2	86.7422747120585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-24	True	NA	-3	True	AATACA	-34	NA	135170730	135165784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168968_135169061_135170398
transcript_169947.known	chr7	-	596	4	FSM	ENSG00000122783.17	ENST00000483029.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	86.9687044606021	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCAGAAGCCCCTGGA	31	True	NA	NA	False	NA	NA	NA	135170675	135166467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168968_135169061_135170651
transcript_169957.nnic	chr7	-	1764	3	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-25	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	74	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGTAAGTTGTGCTAAT	1706	False	NA	-7	True	AATACA	-30	NA	135170763	135165788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135168744_135169061_135170398
transcript_169959.known	chr7	-	578	2	FSM	ENSG00000122783.17	ENST00000486115.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACCCACTTCTGCCTCT	-16	True	NA	NA	False	GGGGCT	-37	NA	135170511	135168595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135169061_135170398
transcript_169960.known	chr7	-	1738	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	114.77223822278	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	45	True	NA	-3	True	AATACA	-34	NA	135170661	135165784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
transcript_169961.known	chr7	-	1727	4	FSM	ENSG00000122783.17	ENST00000617987.1	1727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.296241115955	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	1945	False	NA	0	True	AATACA	-37	NA	135170524	135165781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170275
transcript_169968.known	chr7	-	4580	15	FSM	ENSG00000105875.15	ENST00000354475.5	4580	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	7.94496374941962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTATCTCTCCTTCCATA	-9	True	NA	-16	True	AATAAA	-16	NA	135211526	135183838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_169971.known	chr7	-	5758	15	FSM	ENSG00000105875.15	ENST00000683848.1	5758	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	12.8597219635415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGAACTTCCGCTTAT	136	False	NA	-29	True	AATAAA	-3	NA	135211381	135183851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135210043
transcript_169975.known	chr7	-	4445	14	FSM	ENSG00000105875.15	ENST00000684339.1	4445	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	11.7971012385728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATCCCGGGTGAGCG	NA	False	NA	-67	True	AAGAAA	-34	NA	135211555	135183889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135186316_135186971_135187170_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_169978.known	chr7	-	3563	12	FSM	ENSG00000080802.20	ENST00000541284.6	3538	12	-25	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	44.845925397893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	NA	False	NA	0	True	AATAAA	-22	NA	135510127	135361794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_169979.known	chr7	-	3297	11	FSM	ENSG00000080802.20	ENST00000423368.6	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	36.9730983283792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGGTTGTCCTTGTT	16	True	NA	-3	True	AATAAA	-19	NA	135510077	135361797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_169980.known	chr7	-	2215	11	FSM	ENSG00000080802.20	ENST00000361528.8	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	30.8708600463285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAGGAGCAACCATTA	2	True	NA	NA	False	NA	NA	NA	135510091	135362884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_169981.known	chr7	-	4642	11	FSM	ENSG00000080802.20	ENST00000428680.6	4642	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	37.5207942346641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCCTTGAAATGTTTT	17	True	NA	NA	False	AAAAAG	-3	NA	135510076	135386150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_169986.nic	chr7	-	578	3	ISM	ENSG00000080802.20	ENST00000315544.6	3783	11	5	35206	5	0	5prime_fragment	FALSE	canonical	3	118	junction_1	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATGAGAGAAAACA	NA	False	NA	NA	False	GATAAA	-17	NA	135510122	135422275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_135422354_135438157_135438424_135509888
transcript_16999.nnic	chr1	+	2701	5	NNC	ENSG00000143324.14	novel	4126	14	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	76.5375724726098	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	NA	False	NA	7	True	AATAAA	-19	NA	180632001	180886126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_180632271_180682359_180682412_180787752_180787790_180880075_180880298_180884005
transcript_169990.known	chr7	+	6264	43	FSM	ENSG00000155561.15	ENST00000285968.11	6264	43	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	90.7151637252847	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTATGGTTAATCTTT	-6	True	NA	NA	False	AATAAA	-21	NA	135557916	135648753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795_135578025_135578750_135578916_135584831_135585008_135587574_135587692_135587854_135587993_135591449_135591601_135592986_135593193_135594546_135594730_135597367_135597419_135597997_135598208_135600869_135600970_135601369_135601508_135602804_135602995_135604339_135604461_135606144_135606227_135606750_135606916_135607246_135607372_135614158_135614274_135615915_135616066_135616654_135616727_135617089_135617248_135617601_135617683_135618411_135618604_135619422_135619691_135619789_135619889_135622776_135622926_135625163_135625356_135626239_135626362_135627972_135628112_135630343_135630471_135635580_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
transcript_169997.known	chr7	-	2897	16	FSM	ENSG00000164707.16	ENST00000354042.8	2897	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2.69485105752103	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAGTTGTATCTAGTCT	0	True	NA	NA	False	AATAAA	-33	NA	135728186	135681236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135681701_135684123_135684262_135685521_135685684_135691200_135691326_135691547_135691646_135692322_135692425_135694136_135694239_135695367_135695488_135699363_135699549_135701679_135701761_135702844_135702882_135705595_135705651_135706127_135706301_135708113_135708251_135721394_135721524_135727397
transcript_17.known	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00046_+_0_500
transcript_170.known	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4180	junction_1	2926.22647107157	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
transcript_170001.known	chr7	+	581	4	FSM	ENSG00000243317.8	ENST00000509448.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	409.182382590236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCCCGTTAATTGGG	-12	True	NA	NA	False	NA	NA	NA	135662495	135691873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_135662595_135672752_135672807_135688903_135689029_135691570
transcript_170002.known	chr7	+	2461	3	FSM	ENSG00000243317.8	ENST00000507606.3	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_1	47.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGCTTTTTGGCTAGT	6	True	NA	29	True	AATAAA	-20	NA	135662513	135676416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_135662595_135672752_135672807_135674090
transcript_170007.known	chr7	+	2004	3	FSM	ENSG00000243317.8	ENST00000422968.2	2004	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGGAAAGAAGTGTTAAC	56	False	NA	NA	False	AATACA	-21	NA	135662563	135693418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_135662595_135688903_135689029_135691570
transcript_170009.known	chr7	-	3782	4	FSM	ENSG00000105887.11	ENST00000393085.4	3782	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	7.48331477354788	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGTGTCAGCAGCATT	-22	True	NA	-14	True	AATAAA	-17	NA	135977359	135926759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135930013_135950598_135950683_135951516_135951631_135977028
transcript_170010.known	chr7	-	1482	5	FSM	ENSG00000105894.12	ENST00000348225.7	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	28.0980426364542	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	-19	True	NA	NA	False	AATAAA	-24	NA	137343733	137227340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137228076_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_170012.nic	chr7	-	814	4	ISM	ENSG00000105894.12	ENST00000393083.2	1599	6	-26	23866	-26	-23866	5prime_fragment	FALSE	canonical	3	271	junction_2	21.0765799460496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTTGCCATTATAC	-5	True	NA	-7	True	NA	NA	NA	137343800	137251229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_137251392_137253463_137253638_137254858_137254975_137343438
transcript_170013.nic	chr7	-	478	2	ISM	ENSG00000105894.12	ENST00000393083.2	1599	6	-26	27495	-26	-27495	5prime_fragment	FALSE	canonical	3	276	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAGTAGGGTTCTGAA	-5	True	NA	0	True	AAGAAA	-11	NA	137343800	137254858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_137254975_137343438
transcript_170014.known	chr7	-	7441	12	FSM	ENSG00000182158.16	ENST00000330387.11	7441	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	18.351481125624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGCCCAGTCTTTATA	12	True	NA	-6	True	AATAAA	-21	NA	138002086	137874978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137880552_137882411_137882629_137884994_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_170016.known	chr7	-	2360	10	FSM	ENSG00000182158.16	ENST00000456390.5	2360	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	17.0619785227596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-7	True	NA	NA	False	NA	NA	NA	138002067	137884266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_170018.known	chr7	-	1105	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	3.74165738677394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTTTCCCATATATG	13	True	NA	0	True	AATAAA	-35	NA	138002047	137912810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
transcript_170024.known	chr7	+	3799	19	FSM	ENSG00000122779.18	ENST00000415680.6	3799	19	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_9	170.922515113836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGATTTTTGTTTT	2	True	NA	NA	False	ATTAAA	-17	NA	138460434	138585585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554865_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_170027.known	chr7	+	8488	19	FSM	ENSG00000122779.18	ENST00000343526.9	8488	19	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_9	125.460288341042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGTATGGAATAAAGG	6	True	NA	10	True	AATAAA	-21	NA	138460258	138589996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_170038.nic	chr7	+	3019	16	ISM	ENSG00000122779.18	ENST00000343526.9	8488	19	-101	9392	-101	-4981	5prime_fragment	FALSE	canonical	3	577	junction_9	118.915357385925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGAATATGATTGTGA	NA	False	NA	NA	False	NA	NA	NA	138460157	138580604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561
transcript_170039.nic	chr7	+	3071	16	ISM	ENSG00000122779.18	ENST00000343526.9	8488	19	-101	9340	-101	-4929	5prime_fragment	FALSE	canonical	3	577	junction_9	118.915357385925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGCCTTGTTAAGTTA	NA	False	NA	NA	False	AAAAAG	-5	NA	138460157	138580656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561
transcript_170048.known	chr7	-	12498	20	FSM	ENSG00000122778.10	ENST00000422774.2	12498	20	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_17	9.2849623755721	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATATTTTCTGTTGATTT	-36	True	NA	-4	True	AATAAA	-21	NA	138981389	138831380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_138838161_138840132_138840279_138844316_138844475_138852222_138852270_138861138_138861457_138867974_138868129_138869537_138869762_138871156_138871363_138879537_138879654_138881387_138881585_138894341_138894527_138898954_138899133_138903587_138903737_138905021_138905082_138906918_138907103_138908990_138909122_138911145_138911324_138912371_138912461_138916747_138919439_138981082
transcript_170049.known	chr7	-	3136	22	FSM	ENSG00000105929.16	ENST00000310018.7	3136	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.72220393524049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCCTTAAGATGTCTT	-2	True	NA	-5	True	AATAAA	-16	NA	138798196	138706293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_138706718_138709623_138709796_138715763_138715882_138721896_138722026_138728760_138728863_138732876_138733094_138734135_138734255_138739539_138739634_138745122_138745281_138747424_138747565_138749166_138749318_138752624_138752838_138755688_138755783_138756457_138756541_138759751_138759879_138762339_138762435_138762899_138763026_138768779_138768875_138769172_138769252_138771130_138771265_138786157_138786261_138798033
transcript_170050.known	chr7	-	3090	21	FSM	ENSG00000105929.16	ENST00000393054.5	3090	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.59687194226713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCCTTAAGATGTCT	15	True	NA	-6	True	AATAAA	-15	NA	138774037	138706294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_138706718_138709623_138709796_138715763_138715882_138721896_138722026_138728760_138728863_138732876_138733094_138734135_138734255_138739539_138739634_138745122_138745281_138747424_138747565_138749166_138749318_138752624_138752838_138755688_138755783_138756457_138756541_138759751_138759879_138762339_138762435_138762899_138763026_138768779_138768875_138769172_138769252_138771130_138771265_138773816
transcript_170051.known	chr7	+	1153	3	FSM	ENSG00000214128.11	ENST00000397602.7	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGGCGGCAGAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	138797951	138803748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_138798187_138801329_138801399_138802899
transcript_170052.nnic	chr7	+	1191	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	65	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTGTTGCTTCTACT	NA	False	NA	11	True	AATAAA	-13	NA	139035087	139036945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr7_+_139035986_139036652
transcript_170054.known	chr7	-	1766	5	FSM	ENSG00000146858.8	ENST00000275766.2	1766	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	7.58287544405155	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCTGCTTTCTGA	5	True	NA	NA	False	AATATA	-18	NA	139036042	139025705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139026561_139026707_139026834_139028701_139028961_139034542_139034679_139035652
transcript_170055.known	chr7	-	4776	13	FSM	ENSG00000105939.14	ENST00000464606.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	73.5917322499991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGTTT	20	True	NA	86	True	NA	NA	NA	139109354	139045915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079103_139080244_139083779_139084033_139089623_139089760_139109023
transcript_170056.known	chr7	-	7177	13	FSM	ENSG00000105939.14	ENST00000242351.10	7177	13	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_9	23.6541927220807	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGCCTTTATTTGAT	-3	True	NA	-4	True	AATAAA	-19	NA	139109720	139043514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_170063.known	chr7	-	3182	9	FSM	ENSG00000105939.14	ENST00000471652.1	3182	9	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_5	26.1196166702347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGAGTTGGATATTTT	-2	True	NA	-3	True	AGTAAA	-21	NA	139109719	139060337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_170065.known	chr7	+	4299	18	FSM	ENSG00000105948.13	ENST00000464848.5	4299	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	11.2612880700451	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATATTCTGTTGAGTG	6	True	NA	19	True	ATTAAA	-20	NA	139133777	139191986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_170072.known	chr7	+	1794	16	FSM	ENSG00000105948.13	ENST00000478836.6	1794	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	23.7340823851833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATCATTGTATCATTT	6	True	NA	6	True	NA	NA	NA	139133777	139189802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139160947_139161023_139165131_139165235_139166842_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_170078.known	chr7	+	1661	11	FSM	ENSG00000269955.2	ENST00000541515.3	1661	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	236.494312828025	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTAAGAGTGCTAGTGAA	12	True	NA	NA	False	NA	NA	NA	139341359	139422599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139341523_139345500_139345622_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_17008.known	chr1	+	9946	9	FSM	ENSG00000135835.12	ENST00000367588.9	9946	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	2.77263412660235	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAGTTGCTAAATTCTC	-2	True	NA	17	True	AAAAAG	-21	NA	180912896	180951614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180913294_180916153_180917101_180917850_180917915_180928429_180928574_180935114_180936671_180938554_180938712_180941044_180941286_180944388_180944517_180945302
transcript_170087.known	chr7	+	2411	11	FSM	ENSG00000146963.18	ENST00000456182.5	2411	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	291.780071286577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACCATTATTAAACTG	-16	True	NA	-28	True	AATAAA	-17	NA	139359911	139423151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139360323_139374400_139374472_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_17009.known	chr1	-	4810	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	27.2958096507467	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTTGAAAAGGACTGA	25	True	NA	-35	True	AATAAA	-16	NA	181022870	180972724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
transcript_170090.known	chr7	+	2661	10	FSM	ENSG00000146963.18	ENST00000354926.9	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_8	57.9501701656019	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGAGACTTAAGTTTC	-34	True	NA	29	True	AATAAA	-19	NA	139359893	139423454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_170098.nic	chr7	+	2895	9	ISM	ENSG00000146963.18	ENST00000354926.9	2661	10	-108	4307	-60	-3364	5prime_fragment	FALSE	canonical	3	668	junction_8	58.0339340386295	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCTATGTGAGTTAGAA	264	False	NA	NA	False	AAAACA	-31	NA	139359785	139419147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537
transcript_170102.nic	chr7	+	1126	7	ISM	ENSG00000146963.18	ENST00000354926.9	2661	10	-19	13840	-19	-3211	5prime_fragment	FALSE	canonical	3	682	junction_6	48.3784272400646	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAGAGAGAGAGAGAA	353	False	NA	10	True	AAGAAA	-21	NA	139359874	139409614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562
transcript_170106.known	chr7	+	460	2	FSM	ENSG00000164898.13	ENST00000481123.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGTTTTTCTCTGTAA	5	True	NA	12	True	ATTAAA	-12	NA	139340449	139345790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139340620_139345500
transcript_170107.known	chr7	+	1014	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCCTTGTCCCCA	-11	True	NA	NA	False	AATAAA	-20	NA	139341336	139346328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139341523_139345500
transcript_170110.nnic	chr7	-	3302	6	NNC	ENSG00000188883.5	novel	2158	5	NA	NA	-51	2079	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.7234807118023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGTGTCTGAAATATC	NA	False	NA	-20	True	AATAAA	-30	NA	139483724	139450610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_139451257_139452242_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_170111.nnic	chr7	-	2214	6	NNC	ENSG00000188883.5	novel	2158	5	NA	NA	-51	2079	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.7234807118023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGTGTCTGAAATATC	NA	False	NA	-20	True	AATAAA	-30	NA	139483724	139450610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_139451265_139453338_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_170122.known	chr7	-	2158	5	FSM	ENSG00000188883.5	ENST00000340940.5	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5.35607132140714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCAGCTAGACCTCCA	-3	True	NA	NA	False	NA	NA	NA	139483673	139452689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_170128.nnic	chr7	-	2830	4	NIC	ENSG00000188883.5	novel	2158	5	NA	NA	-51	723	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.49836585598798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGGAAATTCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	139483724	139451966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_139453708_139454110_139454215_139479626_139479773_139482885
transcript_170129.nnic	chr7	-	1555	4	NIC	ENSG00000188883.5	novel	2158	5	NA	NA	-51	96	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.49836585598798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGATTCCAATCTGGGT	NA	False	NA	-6	True	ATTAAA	-44	NA	139483724	139453241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_139453708_139454110_139454215_139479626_139479773_139482885
transcript_170136.nnic	chr7	-	1400	3	NIC	ENSG00000188883.5	novel	2158	5	NA	NA	-42	96	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGATTCCAATCTGGGT	-12	True	NA	-6	True	ATTAAA	-44	NA	139483715	139453241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_139453708_139454110_139454215_139482885
transcript_170138.known	chr7	-	1148	2	FSM	ENSG00000188883.5	ENST00000393039.2	1148	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGACATTGGGATGGT	7	True	NA	-102	True	NA	NA	NA	139483663	139453337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139453708_139482885
transcript_17014.known	chr1	-	4809	6	FSM	ENSG00000135823.14	ENST00000542060.5	4809	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	130.348762940045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGAATTACTAGAATGA	NA	False	NA	-22	True	AATAAA	-29	NA	181023121	180972711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181022638
transcript_170146.known	chr7	+	728	5	FSM	ENSG00000059377.18	ENST00000481440.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	1.78535710713571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGCATTGCAAAGTC	-7	True	NA	NA	False	ATTAAA	-16	NA	139778255	139797483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139778472_139780739_139780825_139782665_139782730_139787337_139787427_139797209
transcript_170148.known	chr7	+	582	3	FSM	ENSG00000059377.18	ENST00000474763.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCATTGCAAAGTCT	-9	True	NA	NA	False	ATTAAA	-17	NA	139778253	139797484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139778472_139787337_139787427_139797209
transcript_170149.known	chr7	-	3021	12	FSM	ENSG00000059378.13	ENST00000263549.8	3021	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	4.00619355209649	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGAAGACTGAAGCTC	-47	True	NA	-13	True	AATAAA	-17	NA	140062951	140023748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140024886_140026196_140026349_140027275_140027407_140028612_140028689_140034234_140034332_140037714_140037857_140041643_140041840_140046883_140047008_140054661_140054764_140056855_140057154_140057898_140058035_140062521
transcript_170151.known	chr7	-	9220	20	FSM	ENSG00000006459.11	ENST00000397560.7	9220	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	3.52827910780934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGACTTTGTTCCCTTTT	1	True	NA	-5	True	TATAAA	-42	NA	140176983	140084745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140091189_140091803_140092078_140094055_140094139_140096554_140096764_140096898_140097048_140097544_140097643_140098878_140099034_140099898_140100024_140101950_140102161_140111094_140111185_140113490_140113583_140119112_140119220_140120441_140120530_140124620_140124784_140126636_140126824_140127441_140127584_140129492_140129654_140133538_140133657_140139104_140139191_140176743
transcript_170152.nic	chr7	-	1994	14	ISM	ENSG00000006459.11	ENST00000397560.7	9220	20	-104	14207	-104	-8050	5prime_fragment	FALSE	canonical	3	24	junction_9	3.77001561687472	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAATGAAGATAGAAG	586	False	NA	NA	False	GATAAA	-15	NA	140177087	140098952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_140099034_140099898_140100024_140101950_140102161_140111094_140111185_140113490_140113583_140119112_140119220_140120441_140120530_140124620_140124784_140126636_140126824_140127441_140127584_140129492_140129654_140133538_140133657_140139104_140139191_140176743
transcript_170155.known	chr7	+	2457	1	FSM	ENSG00000260231.2	ENST00000566699.2	2457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTCAGATATTTTTC	27	True	NA	NA	False	ATTAAA	-21	NA	140177183	140179640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140177200_140179600
transcript_170157.known	chr7	-	3330	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_7	62.5592372337236	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-31	True	NA	NA	False	AATAAA	-18	NA	140398530	140333751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_170159.nic	chr7	-	3871	15	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	110.931400019129	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	NA	False	NA	NA	False	AATAAA	-18	NA	140398553	140333751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_170165.known	chr7	-	3254	14	FSM	ENSG00000157800.18	ENST00000447932.6	3254	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.94231735601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-3	True	NA	NA	False	AATAAA	-18	NA	140398502	140333751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_170172.known	chr7	-	2955	12	FSM	ENSG00000157800.18	ENST00000340308.7	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	130.632915751299	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	42	True	NA	NA	False	AATAAA	-18	NA	140398457	140333751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_170188.known	chr7	+	2661	4	FSM	ENSG00000146955.11	ENST00000537763.6	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTTGTACTGCCCCT	0	True	NA	16	True	ATTAAA	-29	NA	140404057	140427974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140404218_140407623_140407848_140411873_140412058_140425881
transcript_170191.known	chr7	-	3094	8	FSM	ENSG00000133606.11	ENST00000255977.7	3094	8	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_2	89.7343016797879	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTTTTTGAAATGTG	3	True	NA	2	True	AATAAA	-34	NA	140479505	140453032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140454730_140455094_140455234_140455789_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
transcript_170192.nic	chr7	-	3059	8	NIC	ENSG00000133606.11	novel	3094	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	253.299210018346	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTGTGTAATGAGCT	NA	False	NA	-12	True	AATAAA	-20	NA	140479551	140453046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_140454730_140455094_140455234_140455856_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
transcript_170196.known	chr7	-	1390	6	FSM	ENSG00000133606.11	ENST00000495305.5	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	251.545304070658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGAGTGATGGGTGAA	-9	True	NA	NA	False	AGTAAA	-27	NA	140479368	140454142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140454730_140455094_140455234_140455789_140455901_140456651_140456867_140471882_140472012_140479159
transcript_170199.known	chr7	-	1601	5	FSM	ENSG00000133606.11	ENST00000443720.6	1601	5	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	60.4291941035126	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGAGTCTGTGTGAA	9	True	NA	-43	True	AATAAA	-16	NA	140479499	140456191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
transcript_17020.known	chr1	-	4719	8	FSM	ENSG00000135821.19	ENST00000311223.9	4719	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	971.344786302758	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGATTTTGTTCA	-5	True	NA	0	True	ACTAAA	-20	NA	182392206	182381704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182390496_182390853_182391678
transcript_170203.known	chr7	-	3874	20	FSM	ENSG00000146966.13	ENST00000496613.6	3874	20	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_19	18.2551931669409	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCTGTTTATTA	-2	True	NA	28	True	ATTAAA	-14	NA	140640813	140518419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574009_140585588_140585711_140587652_140587781_140601402_140602543_140605704_140605807_140640503
transcript_170205.known	chr7	-	3735	19	FSM	ENSG00000146966.13	ENST00000275884.10	3735	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_18	17.6828193104333	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCTGTTTATTA	682	False	NA	28	True	ATTAAA	-14	NA	140640776	140518419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574009_140585588_140585711_140587652_140587781_140601402_140602543_140640503
transcript_170211.known	chr7	-	6458	18	FSM	ENSG00000157764.14	ENST00000646891.1	6458	18	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	8.50686675615179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGGTTGTGGTGGCTCA	2	True	NA	NA	False	AATAAA	-18	NA	140924928	140730664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140734771_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
transcript_170215.known	chr7	-	1180	3	FSM	ENSG00000157764.14	ENST00000469930.2	1180	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGTCAAAATTTTTCAT	-9	True	NA	NA	False	AATAAA	-15	NA	140924742	140833971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140834873_140850110_140850213_140924565
transcript_170221.known	chr7	+	2574	8	FSM	ENSG00000133597.11	ENST00000072869.9	2574	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	15.6113511815693	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCATTTCTTGAC	7	True	NA	17	True	AATAAA	-16	NA	140672944	140695110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140674264_140674610_140674758_140679154_140679284_140681041_140681138_140686989_140687242_140689596_140689726_140690759_140690814_140694662
transcript_170232.known	chr7	+	726	4	FSM	ENSG00000090266.13	ENST00000464566.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_3	1719.77446841794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGATTTGAATTAGTGA	49	False	NA	NA	False	AATAAA	-25	NA	140696747	140706500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706118
transcript_170233.known	chr7	+	465	4	FSM	ENSG00000090266.13	ENST00000247866.9	465	4	0	0	0	0	multi-exon	FALSE	canonical	3	3020	junction_3	445.789437091349	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	9	True	NA	28	True	ATTAAA	-33	NA	140696707	140706643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706562
transcript_170237.known	chr7	+	420	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1717.49455764947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	7	True	NA	31	True	ATTAAA	-36	NA	140696987	140706646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
transcript_170238.known	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1724.79100183182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	64	False	NA	29	True	ATTAAA	-34	NA	140697223	140706644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
transcript_170243.known	chr7	-	622	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	440	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGATTTGTTTGG	-12	True	NA	-10	True	AATAAA	-12	NA	141014966	141006168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141006536_141010418_141010618_141014910
transcript_170244.known	chr7	-	853	3	FSM	ENSG00000090263.16	ENST00000393008.7	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	481.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAAACTTCTTTCATC	-18	True	NA	NA	False	NA	NA	NA	141014679	141006053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141006536_141010418_141010661_141014550
transcript_170245.known	chr7	-	4210	3	FSM	ENSG00000090263.16	ENST00000324787.10	4210	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	250	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTCACCCCGTCTC	2	True	NA	NA	False	AATAAA	-17	NA	141014952	141002609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141006536_141010418_141010661_141014910
transcript_170246.known	chr7	-	535	2	FSM	ENSG00000090263.16	ENST00000485202.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCTTGTTGGAAGATA	9	True	NA	NA	False	AAAAAG	-5	NA	141014652	141010227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141010661_141014550
transcript_170247.nic	chr7	+	3064	3	ISM	ENSG00000261115.7	ENST00000565468.6	10726	4	-1202	41654	-1202	-41654	5prime_fragment	FALSE	canonical	2	19	junction_2	2	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTAGCGC	244	False	NA	NA	False	ACTAAA	-28	NA	141072861	141438726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_141074693_141212590_141212705_141437607
transcript_170248.known	chr7	+	3628	16	FSM	ENSG00000006530.18	ENST00000649286.2	3628	16	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	26.0524257774375	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTGATTCAGG	1	True	NA	NA	False	TATAAA	-17	NA	141551409	141655244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
transcript_170249.known	chr7	+	517	8	FSM	ENSG00000106028.11	ENST00000465167.1	517	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1725.87293499698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACGAAAGAGAAGGAGT	42	True	NA	-1	True	NA	NA	NA	141738405	141750332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141741748_141741793_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_170252.known	chr7	+	677	7	FSM	ENSG00000106028.11	ENST00000265304.11	677	7	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	738.285325753006	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	-6	True	NA	44	True	NA	NA	NA	141738357	141750488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_170254.known	chr7	+	636	7	FSM	ENSG00000106028.11	ENST00000498107.5	636	7	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	1014.1656121605	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGATTCTTCTTTGG	-6	True	NA	21	True	NA	NA	NA	141738357	141750354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738504_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_170256.known	chr7	+	630	7	FSM	ENSG00000106028.11	ENST00000467681.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	1420.73487439893	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATATTTCTGAGTGACC	32	True	NA	-19	True	NA	NA	NA	141738395	141750314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738576_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_170258.known	chr7	+	1434	6	FSM	ENSG00000106028.11	ENST00000489378.5	1434	6	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	802.653698677082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGATGAGGTTTCACCA	1	True	NA	NA	False	NA	NA	NA	141738364	141746526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495
transcript_170260.known	chr7	+	600	6	FSM	ENSG00000106028.11	ENST00000463093.5	600	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	1599.41369257613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATGTGAGGCGACAA	37	True	NA	NA	False	AATACA	-7	NA	141738400	141745545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738594_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495
transcript_170261.known	chr7	+	2620	2	FSM	ENSG00000106028.11	ENST00000496622.1	2620	2	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGATGTATATATTGA	-6	True	NA	NA	False	AATATA	-27	NA	141738357	141741690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123
transcript_170262.known	chr7	+	676	7	FSM	ENSG00000106028.11	ENST00000484178.5	676	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1512.49800734488	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	2	True	NA	17	True	ATTAAA	-19	NA	141738599	141750461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738679_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_170263.known	chr7	+	662	8	FSM	ENSG00000106028.11	ENST00000469123.5	662	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1729.44181156575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGAGTAATAATCTTT	27	True	NA	12	True	ATTAAA	-14	NA	141738390	141750456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141741748_141741799_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_170264.known	chr7	+	989	7	FSM	ENSG00000106028.11	ENST00000481508.1	989	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	1503.71436412933	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	9	False	NA	17	True	ATTAAA	-19	NA	141738606	141750461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738999_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_170267.known	chr7	+	809	5	FSM	ENSG00000204983.15	ENST00000311737.12	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	1.80277563773199	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTGCT	0	True	NA	10	True	AATAAA	-17	NA	142749471	142753072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142749525_142750554_142750715_142751773_142752028_142752430_142752568_142752867
transcript_170268.known	chr7	+	809	5	FSM	ENSG00000275896.7	ENST00000539842.6	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	6.60965203320114	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTCCT	1	True	NA	17	True	AATAAA	-17	NA	142770969	142774560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142771023_142772048_142772209_142773265_142773520_142773918_142774056_142774355
transcript_170270.nnic	chr7	+	974	5	Fusion	ENSG00000211772.11_ENSG00000211764.1	novel	758	4	NA	NA	-166	0	multi-exon	FALSE	canonical	3	131	junction_1	47.2255227604735	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	62	False	NA	25	True	AATAAA	-29	NA	142796198	142802748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_170272.nnic	chr7	+	956	5	Fusion	ENSG00000211765.1_ENSG00000211772.11_ENSG00000211764.1	novel	758	4	NA	NA	48	0	multi-exon	FALSE	canonical	3	33	junction_1	89.579573564513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	51	False	NA	25	True	AATAAA	-29	NA	142796412	142802748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_+_142796611_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_170274.nnic	chr7	+	998	5	Fusion	ENSG00000211766.1_ENSG00000211767.1_ENSG00000211772.11	novel	758	4	NA	NA	-41	0	multi-exon	FALSE	canonical	3	41	junction_1	86.1191035717395	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	-7	True	NA	25	True	AATAAA	-29	NA	142796655	142802748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_+_142796896_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_170280.known	chr7	+	758	4	FSM	ENSG00000211772.11	ENST00000466254.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	4.64279609239471	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	76	False	NA	25	True	AATAAA	-29	NA	142801040	142802748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142801428_142801943_142801962_142802104_142802212_142802502
transcript_170288.known	chr7	+	3999	20	FSM	ENSG00000106123.12	ENST00000652003.1	3999	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	25.9572416360406	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	-25	True	NA	18	True	ATTAAA	-21	NA	142855075	142871093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_170293.nnic	chr7	+	3933	20	NNC	ENSG00000106123.12	novel	3999	20	NA	NA	-12	0	intron_retention	FALSE	canonical	2	2	junction_10	40.3182629445988	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	114	False	NA	18	True	ATTAAA	-21	NA	142855048	142871093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866998_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_170297.nnic	chr7	+	4174	20	NNC	ENSG00000106123.12	novel	3999	20	NA	NA	-21	0	intron_retention	FALSE	canonical	1	1	junction_6	40.6733491323236	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	105	False	NA	18	True	ATTAAA	-21	NA	142855039	142871093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863630_142863835_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_17030.known	chr1	-	4065	7	FSM	ENSG00000135821.19	ENST00000417584.6	4065	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	792.270033230814	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGATTTTGTTCA	-20	True	NA	0	True	ACTAAA	-20	NA	182391404	182381704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391174
transcript_170303.known	chr7	+	3861	19	FSM	ENSG00000106123.12	ENST00000614832.4	3861	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	41.5957915725042	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGGTTTGGTGTGGTG	42	False	NA	12	True	ATTAAA	-15	NA	142855142	142871087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_170305.nnic	chr7	+	4237	19	NIC	ENSG00000106123.12	novel	3999	20	NA	NA	-340	0	intron_retention	TRUE	canonical	3	28	junction_2	34.3207905891847	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	0	True	NA	18	True	ATTAAA	-21	NA	142854720	142871093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_142855386_142861051_142861187_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_170317.known	chr7	+	4409	18	FSM	ENSG00000106123.12	ENST00000616380.4	4409	18	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	25.6112810351801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGTGGTGAGGCCTC	23	True	NA	19	True	ATTAAA	-22	NA	142855123	142871094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_17032.known	chr1	-	7554	7	FSM	ENSG00000135821.19	ENST00000331872.11	7554	7	0	0	0	0	multi-exon	FALSE	canonical	3	1972	junction_2	216.48922221056	3028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTGTGACTCTGTT	0	True	NA	NA	False	AATAAA	-14	NA	182391790	182378097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391678
transcript_170332.known	chr7	+	584	4	FSM	ENSG00000106123.12	ENST00000497095.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	57.6445044118595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAGAACTGGAATAA	3	True	NA	NA	False	AGTAAA	-3	NA	142855103	142862788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142855386_142861051_142861187_142861999_142862134_142862755
transcript_170338.known	chr7	-	2906	15	FSM	ENSG00000165125.22	ENST00000359396.9	2906	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1.3477115902938	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCCCTTCTGCAT	-3	True	NA	-4	True	AATAAA	-18	NA	142885745	142871207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_142871990_142872371_142872479_142873447_142873717_142874075_142874143_142874490_142874657_142874903_142874981_142875077_142875165_142875467_142875681_142875757_142875905_142876407_142876584_142876738_142876838_142877141_142877280_142877650_142877774_142877928_142878027_142885388
transcript_170348.known	chr7	-	2494	19	FSM	ENSG00000197993.9	ENST00000355265.7	2494	19	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_13	19.9308217171543	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCCTGCTATGTT	-19	True	NA	-14	True	AATAAA	-32	NA	142962363	142941113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
transcript_170351.known	chr7	+	1032	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	20.3670402005449	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	4	True	NA	29	True	AATAAA	-23	NA	143263440	143269115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_170353.known	chr7	+	888	7	FSM	ENSG00000197448.14	ENST00000409500.7	888	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	117.322087529255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAGACGTCCACCATT	-8	True	NA	-91	True	NA	NA	NA	143263428	143268995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143267616_143267734_143268090_143268185_143268787
transcript_170354.known	chr7	+	1185	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	20.9204843793509	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	19	True	NA	29	True	AATAAA	-23	NA	143263455	143269115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
transcript_170357.known	chr7	+	850	7	FSM	ENSG00000197448.14	ENST00000443571.6	850	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	118.4604950559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCAATTCTGCTTTCC	4	True	NA	-24	True	NA	NA	NA	143263440	143269062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143263586_143264085_143264168_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_170364.nic	chr7	+	1881	5	NIC	ENSG00000197448.14	novel	1185	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	308	junction_3	15.5322245670091	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	18	True	NA	29	True	AATAAA	-23	NA	143263454	143269115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_143263586_143264085_143265297_143267616_143267734_143268090_143268185_143268787
transcript_170368.known	chr7	+	1724	2	FSM	ENSG00000178826.11	ENST00000471161.1	1724	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTCCGTGAAGTTA	388	False	NA	3	True	AATAAA	-16	NA	143285346	143288048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143285446_143286423
transcript_170369.known	chr7	+	2375	3	FSM	ENSG00000178826.11	ENST00000359333.8	2375	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTCCGTGAAGTTA	-1	True	NA	3	True	AATAAA	-16	NA	143284957	143288048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143285446_143285940_143286203_143286423
transcript_170370.known	chr7	+	564	3	FSM	ENSG00000178826.11	ENST00000480421.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCTCGTTCATTTGACT	-8	True	NA	NA	False	NA	NA	NA	143284950	143286862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143284975_143285344_143285446_143286423
transcript_170371.known	chr7	+	4089	11	FSM	ENSG00000106144.20	ENST00000310447.10	4089	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	10.675204916066	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCAATATCTGTTT	3	True	NA	20	True	AATAAA	-20	NA	143288350	143307696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143288530_143291539_143291691_143292299_143292468_143292616_143292699_143294229_143294325_143294596_143294774_143299922_143300052_143300203_143300295_143303783_143303934_143304673_143304784_143304939
transcript_170375.known	chr7	+	3187	23	FSM	ENSG00000188037.14	ENST00000343257.7	3187	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.52655160375839	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTTTAATGTGATAG	0	True	NA	NA	False	NA	NA	NA	143316110	143352083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143316393_143319754_143319876_143320663_143320796_143321364_143321494_143321714_143321849_143323308_143323387_143324413_143324493_143330771_143330898_143331231_143331317_143331550_143331653_143332418_143332504_143332723_143332874_143339252_143339323_143339510_143339622_143341928_143342143_143342371_143342506_143345520_143345763_143346139_143346252_143346578_143346659_143346910_143346950_143350371_143350477_143350567_143350655_143351593
transcript_170378.known	chr7	-	3823	7	FSM	ENSG00000159784.18	ENST00000409222.7	3823	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	55.5147628013386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTCCTCCCCCTCCATT	734	False	NA	-3	True	ATTAAA	-16	NA	143362055	143353821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143357023_143357279_143357424_143358826_143359025_143359325_143359420_143359731_143359768_143360039_143360150_143362015
transcript_170379.known	chr7	-	4343	7	FSM	ENSG00000159784.18	ENST00000443739.7	4343	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	4.89897948556636	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGACTGTGAGTGTCT	-4	True	NA	-7	True	ACTAAA	-16	NA	143362713	143353399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143357023_143357279_143357424_143358826_143359025_143359325_143359420_143359731_143359768_143360039_143360150_143362575
transcript_170380.known	chr7	-	4295	7	FSM	ENSG00000159784.18	ENST00000409346.5	4295	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	56.2573451994394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGACTGTGAGTGTC	-16	True	NA	-8	True	ACTAAA	-15	NA	143362725	143353400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143357023_143357279_143357424_143358826_143359025_143359325_143359420_143359731_143359768_143360039_143360150_143362634
transcript_170390.nnic	chr7	+	694	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2058	80	multi-exon	FALSE	canonical	1	6	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCATTATTCTAGCA	132	False	NA	NA	False	ATTAAA	-19	NA	143361840	143364309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr7_+_143362058_143363189_143363258_143363900
transcript_170391.known	chr7	-	648	2	FSM	ENSG00000232533.2	ENST00000429630.2	1186	2	535	3	-241	0	multi-exon	FALSE	canonical	3	37	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTATATGACTCAGTAT	2562	False	NA	-11	True	AATAAA	-19	NA	143380495	143379691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143380110_143380265
transcript_170392.known	chr7	+	484	3	FSM	ENSG00000229153.6	ENST00000421648.2	516	3	29	3	20	0	multi-exon	FALSE	canonical	3	8	junction_1	10	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	16	False	NA	8	True	AATAAA	-23	NA	143407832	143415830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143407891_143415067_143415200_143415536
transcript_170430.known	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_12	40.6425893516168	728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	8	True	NA	-8	True	NA	NA	NA	143408856	143391128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_170480.known	chr7	+	2228	10	FSM	ENSG00000159840.16	ENST00000322764.10	2228	10	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	191.901659486259	2619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTAGTCAGCTCTTT	21	True	NA	17	True	AATAAA	-22	NA	143381344	143391111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143381410_143381556_143381780_143382247_143382448_143382592_143382686_143382800_143383323_143388218_143388340_143388488_143388659_143388766_143388946_143389856_143389978_143390577
transcript_170481.known	chr7	-	2517	3	FSM	ENSG00000253882.7	ENST00000494978.6	2518	3	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTGTTTTTTTTT	7	True	NA	NA	False	AATAAA	-15	NA	143836708	143811968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143813780_143833246_143833884_143836639
transcript_170487.known	chr7	-	5754	9	FSM	ENSG00000198420.10	ENST00000479870.6	5754	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	30.2549066268597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACTTCACATTGATT	-24	True	NA	NA	False	AATAAA	-17	NA	143902176	143851374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_170488.nic	chr7	-	4220	9	NIC	ENSG00000198420.10	novel	5754	9	NA	NA	-9	844	combination_of_known_junctions	FALSE	canonical	3	45	junction_8	46.9958442311658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGAAGAACAGAGCAAG	-33	True	NA	NA	False	AATAAA	-9	NA	143902185	143852851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902026
transcript_170490.nic	chr7	-	4204	9	NIC	ENSG00000198420.10	novel	5754	9	NA	NA	10	733	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	48.3237777910627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGATAGAAAAATATAAAGA	-36	True	NA	NA	False	AATAAA	-38	NA	143902188	143852962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_170491.known	chr7	-	3343	9	FSM	ENSG00000198420.10	ENST00000355951.2	3343	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	58.929512979491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCGGTCAGCTAATTCT	26	True	NA	NA	False	NA	NA	NA	143902126	143853695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902026
transcript_170495.nic	chr7	-	4109	9	NIC	ENSG00000198420.10	novel	5754	9	NA	NA	-9	733	combination_of_known_junctions	FALSE	canonical	3	45	junction_8	46.9958442311658	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGATAGAAAAATATAAAGA	-33	True	NA	NA	False	AATAAA	-38	NA	143902185	143852962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902026
transcript_17050.known	chr1	-	3942	7	FSM	ENSG00000135821.19	ENST00000339526.8	3942	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	793.007933966195	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGATGTGTTTGTGA	-2	True	NA	-8	True	TATAAA	-17	NA	182391792	182382893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182390496
transcript_17051.known	chr1	-	4238	7	FSM	ENSG00000135828.11	ENST00000367559.7	4238	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.40342964277702	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGATTTTCTTTAA	-3	True	NA	1	True	AATAAA	-17	NA	182589256	182573633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182575579_182576255_182576390_182581224_182581358_182582052_182582259_182584080_182584167_182585326_182586971_182589166
transcript_170513.nnic	chr7	-	5157	12	NNC	ENSG00000204959.4	novel	4532	12	NA	NA	-7303	-983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.9068764222973	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTTGAGAGTATTAA	NA	False	NA	NA	False	AATAAA	-23	NA	144294269	144273427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_144274122_144274745_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278312_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144283812_144286979_144294117
transcript_170520.known	chr7	+	531	5	FSM	ENSG00000244198.7	ENST00000493248.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	100.98762300401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	144195518	144250505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144250439
transcript_170526.known	chr7	+	773	4	FSM	ENSG00000244198.7	ENST00000474656.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	45.536310297998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAAAATGCTGATACT	NA	False	NA	NA	False	AAGAAA	-44	NA	144195357	144214223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144214013
transcript_170529.nnic	chr7	+	696	4	NIC	ENSG00000244198.7	novel	819	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_2	85.1521514049345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195320	144243835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144195702_144207692_144207805_144239274_144239389_144243746
transcript_17053.known	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	24.1699710384601	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	0	True	NA	-12	True	AATAAA	-19	NA	182604389	182598622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
transcript_170535.known	chr7	+	4894	3	FSM	ENSG00000244198.7	ENST00000663681.1	4894	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	119.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATATACTGTGCTATAC	NA	False	NA	-20	True	ATTAAA	-42	NA	144195596	144255116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144195702_144207692_144207805_144250439
transcript_170539.known	chr7	-	2609	2	FSM	ENSG00000213214.6	ENST00000378115.3	2609	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTCAAACCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	144195833	144186082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144188396_144195537
transcript_170542.nnic	chr7	-	971	2	NNC	ENSG00000204959.4	novel	4532	12	NA	NA	-7303	-13715	at_least_one_novel_splicesite	FALSE	canonical	3	210	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAACAGAAGCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	144294269	144286159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_144286979_144294117
transcript_170552.known	chr7	+	5482	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	41.6993613223737	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTCAAACTCCTCA	-4	True	NA	23	True	AATAAA	-20	NA	144355401	144380632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
transcript_170558.nic	chr7	+	2263	12	NIC	ENSG00000050327.15	novel	5482	15	NA	NA	-19	-3853	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	48.9589134541563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATACATTTTTGAGAGTA	743	False	NA	NA	False	AATAAA	-19	NA	144355268	144376203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144355502_144362657_144362854_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513
transcript_17056.known	chr1	-	1432	7	FSM	ENSG00000135824.12	ENST00000483095.6	1432	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.10554159678513	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTCACAAGACTACCC	-12	True	NA	NA	False	NA	NA	NA	182671929	182646103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182646918_182648136_182648304_182665968_182666034_182666871_182666974_182669623_182669753_182671656_182671731_182671848
transcript_170569.known	chr7	-	819	6	FSM	ENSG00000244479.7	ENST00000486094.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	38.1240081838203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144355685	144307147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144355337
transcript_170572.known	chr7	-	531	5	FSM	ENSG00000244479.7	ENST00000496968.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	99.9659316967536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	144355520	144300470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144300537_144311590_144311705_144311883_144311940_144343186_144343299_144355337
transcript_170578.nic	chr7	-	618	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	84.2184659086117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355585	144307144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311940_144343186_144343299_144355337
transcript_17058.known	chr1	+	2543	13	FSM	ENSG00000135838.14	ENST00000367553.6	2543	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	14.455871548344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	-2	True	NA	NA	False	AATAAA	-19	NA	182789772	182830384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_170589.nic	chr7	-	738	4	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_2	84.3972090112516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355761	144307144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144355337
transcript_170590.nnic	chr7	-	2418	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-31	1720	combination_of_known_splicesites	FALSE	canonical	3	47	junction_3	49.4929849125667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	NA	False	NA	NA	False	AATGAA	-18	NA	144355250	144335047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354981
transcript_170591.known	chr7	-	773	4	FSM	ENSG00000244479.7	ENST00000462305.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	50.7630661888039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAAAATGCGGATACT	NA	False	NA	NA	False	AAGAAA	-44	NA	144355681	144336767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144336978_144343186_144343299_144350717_144350825_144355337
transcript_170596.known	chr7	-	592	3	FSM	ENSG00000244479.7	ENST00000475089.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	95.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTCATGTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	144355703	144311590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144311705_144343186_144343299_144355337
transcript_170597.nic	chr7	-	3033	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-31	2442	combination_of_known_junctions	FALSE	canonical	3	106	junction_2	31	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAGTAATATGGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	144355250	144334325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144354981
transcript_170599.nic	chr7	-	2311	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-31	1720	combination_of_known_junctions	FALSE	canonical	3	106	junction_2	31	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	NA	False	NA	NA	False	AATGAA	-18	NA	144355250	144335047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144354981
transcript_170601.nic	chr7	-	2304	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-79	1720	combination_of_known_junctions	FALSE	canonical	3	168	junction_1	67	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	NA	False	NA	NA	False	AATGAA	-18	NA	144355599	144335047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144355337
transcript_170604.known	chr7	-	2439	9	FSM	ENSG00000196511.15	ENST00000360057.7	2439	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2.87228132326901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTCCTGAAGCTTAG	-33	True	NA	NA	False	AATAAA	-22	NA	144836053	144451940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_170605.known	chr7	-	521	2	FSM	ENSG00000196511.15	ENST00000548460.2	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGTGTTTTAAATCTA	21	True	NA	NA	False	AATAAA	-18	NA	144835999	144835130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144835619_144835966
transcript_170608.known	chr7	+	6076	4	FSM	ENSG00000174469.23	ENST00000463592.3	6076	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349.077196174269	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTTCGTGTTTTGTA	0	True	NA	28	True	AATAAA	-31	NA	148339460	148420998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148339634_148383648_148383889_148409390_148409472_148415416
transcript_170615.known	chr7	+	3086	22	FSM	ENSG00000055130.18	ENST00000662716.1	3086	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	132.502102837034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTAATGTGTGAAAA	298	False	NA	4	True	NA	NA	NA	148698071	148800988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698260_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_170618.known	chr7	+	2938	22	FSM	ENSG00000055130.18	ENST00000665936.1	2938	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	131.938520692898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	743	False	NA	-12	True	NA	NA	NA	148698516	148801004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698541_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_170620.known	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000663044.1	3054	22	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	135.897587156694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTCGCATT	819	False	NA	8	True	AATAAA	-13	NA	148698592	148801024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698713_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_170621.known	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	124.124982730587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	0	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_170623.known	chr7	+	3147	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_8	62.6037460935311	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTAGTGTCTTCCTGT	-5	True	NA	24	True	AATAAA	-25	NA	148698902	148801110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_170634.nic	chr7	+	1863	2	ISM	ENSG00000055130.18	ENST00000655324.1	2887	21	-92	69413	-83	-28916	5prime_fragment	FALSE	canonical	3	549	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGTGCAGTGGTTTTT	38	False	NA	8	True	CATAAA	-19	NA	148698773	148731568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_148699030_148729961
transcript_170636.known	chr7	+	3056	22	FSM	ENSG00000055130.18	ENST00000662670.1	3056	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	137.893152628947	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTCGCATT	15	True	NA	8	True	AATAAA	-13	NA	148698922	148801024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756967_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_170638.known	chr7	-	2707	21	FSM	ENSG00000106462.12	ENST00000683744.1	2707	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	127.803560200802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTCAACTTTGAATAAA	-14	True	NA	-51	True	NA	NA	NA	148884314	148807419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_170640.known	chr7	-	2535	20	FSM	ENSG00000106462.12	ENST00000682317.1	2535	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	144.992998207106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGGTACATTTTTCAAC	31	True	NA	-61	True	NA	NA	NA	148884269	148807429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846469_148846599_148847181_148847306_148884163
transcript_170641.known	chr7	-	2591	20	FSM	ENSG00000106462.12	ENST00000460911.5	2591	20	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_17	62.2729671500654	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	0	True	NA	-16	True	AATAAA	-16	NA	148884245	148807384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_170642.known	chr7	-	2466	20	FSM	ENSG00000106462.12	ENST00000483967.5	2466	20	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_17	90.8459168560607	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAATTTATAGTAATGA	13	True	NA	NA	False	AAAAAG	-40	NA	148884287	148807524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846496_148846599_148847181_148847306_148884163
transcript_170644.known	chr7	-	2477	19	FSM	ENSG00000106462.12	ENST00000350995.6	2477	19	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_16	92.2845171129233	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	-3	True	NA	-16	True	AATAAA	-16	NA	148884248	148807384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846469_148846599_148847181_148847306_148884163
transcript_170646.known	chr7	-	3641	19	FSM	ENSG00000106462.12	ENST00000492143.5	3641	19	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	134.622712390436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGAATCATCTCTCAT	17	True	NA	-14	True	AATAAA	-18	NA	148884283	148807382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_170657.known	chr7	-	1876	10	FSM	ENSG00000106462.12	ENST00000498186.5	1876	10	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_7	69.1146837233076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAATATTGAACCTCC	13	True	NA	NA	False	AATAAA	-5	NA	148884287	148817356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_170660.known	chr7	+	1906	1	FSM	ENSG00000281189.1	ENST00000627071.1	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGGTGTTGATATG	NA	False	NA	NA	False	AATAAA	-20	NA	148987526	148989432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148987500_148989400
transcript_170669.known	chr7	-	2921	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1287.31846856408	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAGAACTGCGTTAGAA	-2	True	NA	-23	True	AATAAA	-14	NA	149028662	149003067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
transcript_17068.known	chr1	+	2461	11	FSM	ENSG00000135838.14	ENST00000258317.6	2461	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	13.7404512298541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	4575	False	NA	NA	False	AATAAA	-19	NA	182794349	182830384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_170699.nnic	chr7	-	3120	5	NNC	ENSG00000197362.15	novel	3209	4	NA	NA	-14	-324	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	37.2986259800545	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTTCTGACATTTTAAA	NA	False	NA	43	True	TATAAA	-22	NA	149090796	149069966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_149072474_149074385_149074539_149080590_149080718_149083819_149083979_149090622
transcript_170703.known	chr7	-	3209	4	FSM	ENSG00000197362.15	ENST00000491431.2	3209	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	31.5383364600397	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-14	True	NA	NA	False	NA	NA	NA	149090718	149069640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149072474_149074385_149074539_149080590_149080718_149090622
transcript_170705.known	chr7	-	3144	3	FSM	ENSG00000197362.15	ENST00000316286.13	3144	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	25.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149090782	149069642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149072474_149074385_149074539_149090622
transcript_170708.nnic	chr7	-	634	2	NNC	ENSG00000197362.15	novel	3209	4	NA	NA	-14	-13876	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCCGGGCGCGGTGGA	NA	False	NA	NA	False	AATAAA	-23	NA	149090796	149083518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_149083979_149090622
transcript_170710.known	chr7	-	3198	4	FSM	ENSG00000204947.9	ENST00000378061.7	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	14.1656862405839	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCCATGTGTTCTTT	-3	True	NA	-4	True	AATAAA	-28	NA	149126324	149102783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149105567_149112136_149112296_149118221_149118349_149126195
transcript_170711.known	chr7	+	5460	6	FSM	ENSG00000197024.9	ENST00000475153.6	5460	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	13.6616250863505	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTCATTCCAAATGGAA	-2	True	NA	NA	False	ATTAAA	-16	NA	149147452	149183042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149147767_149153944_149154341_149166157_149166285_149166816_149166931_149176467_149176582_149178647
transcript_170714.known	chr7	+	1815	9	FSM	ENSG00000170265.12	ENST00000479907.1	1815	9	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	10.7870002781125	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGCCGGACGGAGTGG	1	True	NA	NA	False	NA	NA	NA	149195549	149224663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149195755_149198332_149198753_149206695_149206823_149207350_149207471_149210584_149210705_149212357_149212472_149213700_149213815_149223811_149223991_149224247
transcript_170715.known	chr7	+	2807	5	FSM	ENSG00000170260.9	ENST00000335870.7	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	4.32290411644765	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATACTGGATGTTTTTC	-5	True	NA	6	True	AATAAA	-30	NA	149239650	149255606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149239803_149250158_149250549_149250680_149250808_149252705_149252796_149253558
transcript_17074.known	chr1	+	4493	28	FSM	ENSG00000135829.17	ENST00000367549.4	4493	28	0	0	0	0	multi-exon	TRUE	canonical	3	791	junction_11	102.208466599978	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTCCCATAT	-5	True	NA	8	True	AATAAA	-21	NA	182839346	182887982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_170756.known	chr7	+	4424	6	FSM	ENSG00000204946.10	ENST00000434415.6	4424	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.49933330370107	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCGTGCGCTTGATCT	-11	True	NA	NA	False	AATAAA	-15	NA	149262195	149284988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149262358_149266334_149266731_149266818_149266946_149267096_149267223_149278398_149278528_149281504
transcript_17076.nic	chr1	+	4488	28	NIC	ENSG00000135829.17	novel	2531	9	NA	NA	-138	0	intron_retention	FALSE	canonical	3	84	junction_1	194.510782334668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGCCGTGTAGTTTG	244	False	NA	12	True	AATAAA	-12	NA	182839595	182887747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_182839936_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_170773.known	chr7	-	3172	6	FSM	ENSG00000196453.8	ENST00000247930.5	3172	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	23.9633052812003	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGTTTCCTGTTTGCCGT	-1	True	NA	-1	True	AATAGA	-17	NA	149461062	149431362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149432933_149436574_149436827_149450998_149451113_149454110_149454238_149455176_149456038_149460814
transcript_170775.known	chr7	-	3799	7	FSM	ENSG00000181220.18	ENST00000340622.8	3799	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	39.8162445910376	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGTTGGGTTCCATT	-18	True	NA	-23	True	AATAAA	-18	NA	149497809	149472792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149475481_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494071_149494203_149494504_149497512
transcript_170776.known	chr7	-	3949	7	FSM	ENSG00000181220.18	ENST00000644635.1	3949	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	36.9804753289564	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTAGGCTTGGTCACC	-26	True	NA	74	True	GGGGCT	-25	NA	149497817	149472695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149475481_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494116_149494203_149494504_149497512
transcript_170777.known	chr7	-	3797	7	FSM	ENSG00000181220.18	ENST00000685153.1	2425	7	-64	-1308	2	-2	multi-exon	FALSE	canonical	3	79	junction_1	42.3979166154816	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGTTTGTTGGGTTCC	-16	True	NA	-26	True	AATAAA	-15	NA	149497807	149472795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149475484_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494071_149494203_149494504_149497512
transcript_170795.nic	chr7	-	3765	9	NIC	ENSG00000133624.14	novel	3564	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	16	junction_4	9.6557948921878	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGTGTTCTGCATCA	23	False	149624787	0	True	AATAAA	-20	NA	149624764	149547153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_149549375_149550867_149550947_149551573_149551827_149552800_149553017_149558607_149558840_149619923_149620038_149621045_149621173_149621259_149621560_149624541
transcript_170797.known	chr7	-	1616	9	FSM	ENSG00000133624.14	ENST00000486492.5	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	12.2551009787761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTGCCTCTTTCAGTC	159	False	NA	NA	False	NA	NA	NA	149624628	149549082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149549375_149550867_149550947_149551654_149551827_149552800_149553014_149558607_149558840_149619923_149620038_149621045_149621173_149621259_149621560_149624541
transcript_1708.nic	chr1	-	2635	19	NIC	ENSG00000157881.16	novel	2641	19	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	35.2166136438927	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	3638	False	NA	-9	True	AATAGA	-14	NA	2526624	2508536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510749_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_170811.nic	chr7	+	3795	17	NIC	ENSG00000133619.18	novel	3827	17	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	15.0145762510968	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	25	True	NA	16	True	ATTAAA	-16	NA	149714981	149734571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721379_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_170812.known	chr7	+	3763	17	FSM	ENSG00000133619.18	ENST00000496259.6	3827	17	60	4	-46	0	multi-exon	FALSE	canonical	3	16	junction_1	13.5271717295228	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	-8	True	NA	16	True	ATTAAA	-16	NA	149715010	149734571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_170816.nic	chr7	+	3747	17	NIC	ENSG00000133619.18	novel	3827	17	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	16.7705098312484	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	25	True	NA	16	True	ATTAAA	-16	NA	149714981	149734571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_149715067_149719545_149719673_149720052_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_170817.nic	chr7	+	4052	17	NIC	ENSG00000133619.18	novel	4020	17	NA	NA	-49	0	intron_retention	FALSE	canonical	3	3	junction_1	17.106171218306	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	-11	True	NA	16	True	ATTAAA	-16	NA	149715007	149734571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_149715350_149719545_149719673_149720007_149720128_149720834_149720991_149721379_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_170825.known	chr7	+	4020	17	FSM	ENSG00000133619.18	ENST00000319551.12	4020	17	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	16.9336942218761	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTGACTCCTATAGAAG	38	False	NA	20	True	ATTAAA	-20	NA	149715056	149734575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149715350_149719532_149719673_149720007_149720128_149720834_149720991_149721379_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_170826.nic	chr7	+	4051	17	NIC	ENSG00000133619.18	novel	4020	17	NA	NA	-38	0	intron_retention	TRUE	canonical	3	4	junction_1	15.7077807153016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	0	True	NA	16	True	ATTAAA	-16	NA	149715018	149734571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_149715350_149719532_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_17083.nic	chr1	+	1949	16	ISM	ENSG00000135829.17	ENST00000367549.4	4493	28	-42	13068	-42	-1835	5prime_fragment	FALSE	canonical	3	791	junction_11	75.951563512544	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGGATAAGGATGATG	NA	False	NA	NA	False	NA	NA	NA	182839304	182874914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853
transcript_170849.known	chr7	-	2843	5	FSM	ENSG00000181444.13	ENST00000302017.4	2843	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.29128784747792	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCATCCTGGCTCCTGC	-10	True	NA	NA	False	AATAAA	-24	NA	149773588	149764181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149766240_149769089_149769201_149770439_149770557_149770998_149771075_149773107
transcript_170852.known	chr7	+	594	4	FSM	ENSG00000106479.11	ENST00000460379.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGGTTATACAGGACC	-42	True	NA	NA	False	NA	NA	NA	149838374	149848024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149838462_149844624_149844737_149846150_149846256_149847734
transcript_170854.known	chr7	+	1666	4	FSM	ENSG00000171130.19	ENST00000479613.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	97.537457192381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTACTGTTTGGTGA	-31	True	NA	17	True	AATAAA	-12	NA	149873975	149880689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878747_149879334
transcript_170855.known	chr7	+	1723	4	FSM	ENSG00000171130.19	ENST00000425642.3	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	18.263503375737	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTGGTGACAAAGC	-38	True	NA	23	True	AATAAA	-18	NA	149873968	149880695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879334
transcript_170857.known	chr7	-	2973	4	FSM	ENSG00000204934.10	ENST00000461019.5	2973	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAAAGCACTTTGTAAA	6	True	NA	-34	True	AGTAAA	-17	NA	149873845	149867772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149869859_149870241_149870352_149871641_149871797_149873223
transcript_170858.known	chr7	-	2936	3	FSM	ENSG00000204934.10	ENST00000488315.5	2936	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTCATCTTTACCTTC	9	True	NA	42	True	NA	NA	NA	149873842	149867696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149869859_149871641_149871797_149873223
transcript_170859.known	chr7	+	1766	5	FSM	ENSG00000171130.19	ENST00000471877.5	1766	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	105.8828952192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTGGTGACAAAGCC	-20	True	NA	24	True	AATAAA	-19	NA	149873986	149880696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879165_149879226_149879334
transcript_17086.known	chr1	+	814	6	FSM	ENSG00000135829.17	ENST00000483416.1	814	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	328.235281467425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGTACACCCAAGTGG	7	True	NA	35	True	AAGAAA	-14	NA	182839733	182854142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182839936_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029
transcript_170862.known	chr7	-	685	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	2632	junction_5	159.731023912075	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	13	True	NA	-15	True	AATAAA	-13	NA	150341629	150338328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_170872.known	chr7	-	583	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	1202.50779623252	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-20	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_170874.known	chr7	+	1815	3	FSM	ENSG00000127399.15	ENST00000359623.9	1815	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTGGCATTTCATG	23	True	NA	9	True	ATTAAA	-21	NA	150323354	150338156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150323561_150325840_150326011_150336717
transcript_170876.known	chr7	-	1618	5	FSM	ENSG00000106538.10	ENST00000466675.5	1618	5	0	0	0	0	multi-exon	FALSE	canonical	3	2752	junction_3	132.594306061761	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCCATGATAATAAAGCT	-1	True	NA	-44	True	NA	NA	NA	150341643	150338357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435
transcript_170877.known	chr7	-	1907	4	FSM	ENSG00000106538.10	ENST00000478771.2	1907	4	0	0	0	0	multi-exon	FALSE	canonical	3	2752	junction_3	108.192215780783	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTTGCACGACTT	-18	True	NA	-3	True	AATAAA	-25	NA	150341660	150338316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099
transcript_170881.known	chr7	+	3182	4	FSM	ENSG00000214022.12	ENST00000479668.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.09624744987	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	52	False	NA	27	True	AATAAA	-16	NA	150368271	150374039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368319_150369670_150369869_150370759_150370885_150371227
transcript_170882.known	chr7	+	1029	4	FSM	ENSG00000214022.12	ENST00000482680.1	1029	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	92.1604880388312	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGACCAGCTAGTTGCC	-14	True	NA	NA	False	NA	NA	NA	150368811	150371803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369670_150369869_150370759_150370885_150371227
transcript_170888.known	chr7	+	899	4	FSM	ENSG00000214022.12	ENST00000467980.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	18.9267594221045	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTGCATCTGCGGGCC	14	True	NA	NA	False	NA	NA	NA	150368839	150371632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369014_150369670_150369869_150370759_150370885_150371230
transcript_170898.nnic	chr7	+	1835	4	NNC	ENSG00000196456.13	novel	2261	3	NA	NA	-96	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	60.6465168002252	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGGTTTGATGTCCCT	5548	False	NA	8	True	AATAAA	-15	NA	150379233	150398630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_150379393_150388421_150388502_150396512_150397004_150397525
transcript_170907.known	chr7	+	3130	3	FSM	ENSG00000214022.12	ENST00000489432.7	3130	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	41	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	-4	True	NA	27	True	AATAAA	-16	NA	150368821	150374039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369670_150369869_150371227
transcript_17091.known	chr1	+	7929	28	FSM	ENSG00000135862.6	ENST00000258341.5	7929	28	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_1	48.7406844534179	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGGCCTGAGTG	-33	True	NA	12	True	AATAAA	-24	NA	183023419	183145592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659_183134810_183135041_183135157_183136385_183136586_183137668_183137828_183140403_183140504_183142533
transcript_170912.known	chr7	+	1262	3	FSM	ENSG00000214022.12	ENST00000488943.1	1262	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	76	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCCCAGGAGTCCGCGG	-4	True	NA	NA	False	NA	NA	NA	150368821	150372242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369741_150369869_150371227
transcript_170913.nnic	chr7	+	3251	3	NIC	ENSG00000214022.12	novel	3292	4	NA	NA	-162	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	13.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	408	False	NA	27	True	AATAAA	-16	NA	150368627	150374039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150368942_150370759_150370885_150371227
transcript_170916.known	chr7	+	480	3	FSM	ENSG00000214022.12	ENST00000522266.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	47.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGGCAGGGCCCAT	71	False	NA	NA	False	NA	NA	NA	150368896	150371392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369014_150369670_150369869_150371227
transcript_170917.nic	chr7	+	3247	3	NIC	ENSG00000214022.12	novel	3130	3	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	64	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	143	False	NA	27	True	AATAAA	-16	NA	150368796	150374039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150369034_150369670_150369869_150371227
transcript_170922.known	chr7	+	1167	3	FSM	ENSG00000284691.1	ENST00000498682.3	1167	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	39	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCACCCGGGCATGAG	8429	False	NA	NA	False	NA	NA	NA	150405145	150410249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150405318_150407583_150408489_150410159
transcript_170929.nic	chr7	+	2064	3	NIC	ENSG00000284691.1	novel	859	2	NA	NA	102	358	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	11.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTTAGTCATTCCCT	242	False	NA	13	True	AATAAA	-13	NA	150405543	150410957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150405905_150407583_150408489_150410159
transcript_170930.nic	chr7	+	3574	3	NIC	ENSG00000284691.1	novel	859	2	NA	NA	102	-3	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	11.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGTGTAAGGAGTGG	242	False	NA	14	True	AATAAA	-14	NA	150405543	150412467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150405905_150407583_150408489_150410159
transcript_170936.known	chr7	+	583	2	FSM	ENSG00000214022.12	ENST00000519397.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCAAATGCGAGAGACGC	23	False	NA	NA	False	NA	NA	NA	150368188	150371680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368319_150371227
transcript_170937.known	chr7	+	1064	2	FSM	ENSG00000214022.12	ENST00000473391.1	1064	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCTTTGCAAACCCAGG	156	False	NA	NA	False	AATGAA	-24	NA	150368809	150370602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369670
transcript_170938.known	chr7	+	910	2	FSM	ENSG00000214022.12	ENST00000469309.1	910	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCACAGTCTGGGCAGG	19	False	NA	NA	False	NA	NA	NA	150368844	150370411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369014_150369670
transcript_170939.known	chr7	+	672	2	FSM	ENSG00000214022.12	ENST00000495535.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTGCAGGAATCTGGG	0	True	NA	NA	False	NA	NA	NA	150368825	150370134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369034_150369670
transcript_170940.known	chr7	+	621	2	FSM	ENSG00000214022.12	ENST00000518462.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGCTGCCACCCCA	267	False	NA	NA	False	NA	NA	NA	150369379	150371557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369671_150371227
transcript_170941.known	chr7	+	559	2	FSM	ENSG00000284691.1	ENST00000641234.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGACACATCCAGTAAG	8147	False	NA	NA	False	NA	NA	NA	150404863	150410264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150405318_150410159
transcript_170942.known	chr7	+	859	2	FSM	ENSG00000284691.1	ENST00000642087.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACCCCTGGAGATGGCCC	60	False	NA	NA	False	NA	NA	NA	150405736	150408274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150405905_150407583
transcript_170943.known	chr7	+	571	2	FSM	ENSG00000284691.1	ENST00000642008.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCCAGATGTGAATGAA	97	False	NA	NA	False	NA	NA	NA	150405773	150410599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150405905_150410159
transcript_170944.known	chr7	+	2876	1	FSM	ENSG00000214022.12	ENST00000425389.2	2876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	1522	False	NA	27	True	AATAAA	-16	NA	150371163	150374039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150371200_150374000
transcript_170945.known	chr7	+	2582	2	FSM	ENSG00000284691.1	ENST00000641330.1	2582	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTAAGGAGTGGTCA	3985	False	NA	17	True	AATAAA	-17	NA	150400701	150412470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150400973_150410159
transcript_170948.known	chr7	+	1033	7	FSM	ENSG00000002933.9	ENST00000004103.8	1033	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.21335164821342	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCGCTTAGTTATTCC	-2	True	NA	6	True	AATAAA	-21	NA	150800768	150805118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150800829_150801535_150801725_150802214_150802326_150803399_150803457_150803619_150803833_150804361_150804473_150804826
transcript_170949.known	chr7	-	1430	7	FSM	ENSG00000106565.18	ENST00000447204.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	2.64575131106459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGGTTTCCCTTTGTTT	-3	True	NA	5	True	AATAAA	-30	NA	150801360	150791286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800992
transcript_170952.known	chr7	-	1115	7	FSM	ENSG00000106565.18	ENST00000326442.10	1115	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	3.35410196624968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCCCAGAAAGATATG	1	True	NA	-9	True	AATAAA	-16	NA	150800364	150791300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800297
transcript_170953.known	chr7	-	3165	11	FSM	ENSG00000055118.17	ENST00000330883.9	3165	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	10.4957134107215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGGTGCTGGGAGGG	5	True	NA	-30	True	AATAAA	-18	NA	150955804	150944960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150945515_150946876_150947055_150947327_150947515_150947605_150947879_150948443_150948544_150948855_150949050_150950167_150950421_150950920_150951121_150951447_150951836_150952424_150952854_150955395
transcript_170954.known	chr7	-	2441	5	FSM	ENSG00000055118.17	ENST00000461280.2	2441	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	11.9268604418766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGCTGG	-12	True	NA	NA	False	AGTAAA	-9	NA	150955821	150949422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150950421_150950920_150951121_150951447_150951836_150952424_150952854_150955395
transcript_17096.nic	chr1	+	2646	2	ISM	ENSG00000135862.6	ENST00000258341.5	7929	28	6	40328	6	-5367	5prime_fragment	FALSE	canonical	3	338	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGCAGAAGACCGAAT	-27	True	NA	NA	False	AAAAAG	-18	NA	183023425	183105264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_183024135_183103327
transcript_170963.known	chr7	+	1111	6	FSM	ENSG00000164867.11	ENST00000477227.1	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	9.2217135067188	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGATTCAGCATTAT	-10	True	NA	NA	False	NA	NA	NA	151010532	151014289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
transcript_170968.known	chr7	+	4656	16	FSM	ENSG00000197150.13	ENST00000358849.9	4656	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	9.87026961243827	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	-2	True	NA	7	True	AATAAA	-20	NA	151028449	151047782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_170971.known	chr7	+	1596	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	20.8776565545532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	15	False	NA	19	True	CATAAA	-29	NA	151028466	151037570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
transcript_170974.known	chr7	+	2350	16	FSM	ENSG00000197150.13	ENST00000498578.5	2350	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	20.1178748601558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGTCTGCCAGAGTCAT	10	True	NA	14	True	NA	NA	NA	151028461	151045563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044147_151045208
transcript_170985.known	chr7	+	4119	23	FSM	ENSG00000164889.15	ENST00000413384.7	4119	23	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_2	87.1355930159882	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	-22	True	NA	7	True	AGTAAA	-16	NA	151059588	151076523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151059763_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_1710.known	chr1	-	2641	19	FSM	ENSG00000157881.16	ENST00000378466.9	2641	19	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_4	20.5439156232643	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	6	True	NA	-9	True	AATAGA	-14	NA	2526596	2508536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510783_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_171029.known	chr7	+	3947	22	FSM	ENSG00000164889.15	ENST00000392826.6	3947	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	133.001219028393	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCTGTGGCCTTTTGT	970	False	NA	6	True	AGTAAA	-15	NA	151062546	151076522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151062664_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_17103.known	chr1	+	5398	23	FSM	ENSG00000058085.15	ENST00000264144.5	5398	23	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_22	11.7068179612079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAAAACTCTAGCTGGG	1	True	NA	NA	False	CATAAA	-10	NA	183186263	183245127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183186432_183207880_183208070_183215452_183215589_183218389_183218489_183220824_183220962_183222088_183222212_183223134_183223325_183225607_183225721_183226697_183226917_183227514_183227698_183228373_183228620_183230960_183231104_183232186_183232344_183232651_183232858_183234366_183234447_183235574_183235731_183236459_183236605_183237351_183237505_183238306_183238422_183239363_183239564_183240039_183240199_183240291_183240392_183243146
transcript_171031.known	chr7	+	4387	22	FSM	ENSG00000164889.15	ENST00000461735.1	4387	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	133.833094009494	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	16	False	NA	7	True	AGTAAA	-16	NA	151062633	151076523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151063190_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_17106.nnic	chr1	+	3959	23	Fusion	ENSG00000287929.1_ENSG00000058085.15	novel	5398	23	NA	NA	-269	0	multi-exon	FALSE	canonical	3	12	junction_22	13.6990227074962	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGGCTCTGCGTGAATT	NA	False	NA	9	True	AATAAA	-17	NA	183185968	183258968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_183186432_183207880_183208070_183215452_183215589_183218389_183218489_183220824_183220962_183222088_183222212_183223134_183223325_183225607_183225721_183226697_183226917_183227514_183227698_183228373_183228620_183230960_183231104_183232186_183232344_183232651_183232858_183234366_183234447_183235574_183235731_183236459_183236605_183237351_183237505_183238306_183238422_183239363_183239564_183240039_183240199_183240291_183240392_183258721
transcript_17108.known	chr1	+	4313	22	FSM	ENSG00000058085.15	ENST00000493293.5	4313	22	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_18	10.6441088003738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAATAAAAAAGAATCA	13	False	NA	NA	False	NA	NA	NA	183186237	183241261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183186432_183207880_183208070_183215452_183215589_183218389_183218489_183220824_183220962_183222088_183222212_183223134_183223325_183225607_183225721_183226697_183226917_183227514_183227698_183228373_183228620_183230960_183231104_183232186_183232344_183232651_183232858_183234366_183234447_183235574_183235731_183236459_183236605_183237351_183237505_183238306_183238422_183239363_183239564_183240039_183240199_183240291
transcript_171109.known	chr7	-	1122	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	50.5493785265604	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGATGTGGTGGTC	13	True	NA	-5	True	CATAAA	-18	NA	151057897	151053814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_171117.known	chr7	-	783	11	FSM	ENSG00000164885.13	ENST00000297518.4	783	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.0173507275901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGACCCCCGGCCTC	4139	False	NA	NA	False	NA	NA	NA	151057848	151054008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_17114.known	chr1	-	5441	11	FSM	ENSG00000157064.11	ENST00000287713.7	5441	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	3.49428104193123	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTCTTGGTCAAGA	6	True	NA	-2	True	AATAAA	-19	NA	183418380	183248236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183252744_183261001_183261070_183261201_183261304_183278552_183278630_183283994_183284040_183284709_183284791_183286661_183286789_183290127_183290207_183292789_183292858_183293704_183293794_183418182
transcript_171154.nic	chr7	-	2083	10	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	137.48777723452	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-9	True	NA	-40	True	ATTAAA	-14	NA	151080852	151076625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080436
transcript_171156.known	chr7	-	1794	10	FSM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_9	49.9164734430193	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	0	True	NA	-38	True	ATTAAA	-16	NA	151080809	151076623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_171161.known	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	136.656729539365	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	8639	False	NA	-40	True	ATTAAA	-14	NA	151080862	151076625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
transcript_171170.known	chr7	-	1402	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	146.428310104296	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	1	True	NA	-40	True	ATTAAA	-14	NA	151080842	151076625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
transcript_171171.known	chr7	-	1751	9	FSM	ENSG00000164896.21	ENST00000489884.5	1751	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	194.669431344523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	15	True	NA	-38	True	ATTAAA	-16	NA	151080794	151076623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151080208
transcript_171187.known	chr7	-	1826	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_8	52.7802046225666	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAAGTTCCTTTCCTTC	19	True	NA	-60	True	NA	NA	NA	151080790	151076645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_171194.nic	chr7	-	1903	9	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	336	junction_8	47.021271782035	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-4	True	NA	-40	True	ATTAAA	-14	NA	151080847	151076625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_151076833_151076912_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_171205.known	chr7	-	1521	8	FSM	ENSG00000164896.21	ENST00000460980.5	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	155.822897900803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCGTTGTGAATCTCAG	8635	False	NA	-43	True	ATTAAA	-11	NA	151080866	151076628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151078093_151078561_151078702_151078841_151079022_151080684
transcript_17127.nic	chr1	+	6055	23	FSM	ENSG00000116698.22	ENST00000688051.1	5946	23	-110	1	-89	0	multi-exon	FALSE	canonical	3	102	junction_18	87.8449987287432	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTATCGATTCTT	-10	True	NA	18	True	ATTAAA	-18	NA	183472388	183554190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_171280.known	chr7	-	826	2	FSM	ENSG00000164896.21	ENST00000478477.1	826	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGCCTTCCCCGAAGGC	9570	False	NA	NA	False	NA	NA	NA	151079931	151077698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151078093_151079499
transcript_171290.nnic	chr7	-	1195	3	NNC	ENSG00000164897.14	novel	1295	3	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	185.5	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCAGTGTGTCTGAGT	-1	True	NA	-7	True	ATTAAA	-19	NA	151083528	151081084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_151081901_151082174_151082459_151083433
transcript_171291.known	chr7	-	1563	3	FSM	ENSG00000164897.14	ENST00000392818.7	1563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	200	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCAGTGTGTCTGAGT	6410	False	NA	-7	True	ATTAAA	-19	NA	151083091	151081084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151081901_151082174_151082594_151082763
transcript_171292.known	chr7	-	882	3	FSM	ENSG00000164897.14	ENST00000476627.5	882	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	200	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGGCGGGAGCTGCTG	6269	False	NA	NA	False	NA	NA	NA	151083232	151081495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151081901_151082174_151082594_151083174
transcript_171293.known	chr7	-	899	3	FSM	ENSG00000164897.14	ENST00000482202.5	899	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	195.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTGCCCAGGCC	6101	False	NA	NA	False	NA	NA	NA	151083400	151081483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151081901_151082174_151082594_151083337
transcript_171294.known	chr7	-	1295	3	FSM	ENSG00000164897.14	ENST00000297533.9	1295	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	63	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCAGTGTGTCTGAGT	-9	True	NA	-7	True	ATTAAA	-19	NA	151083493	151081084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151081901_151082174_151082594_151083433
transcript_171301.nic	chr7	+	3098	18	NIC	ENSG00000133612.19	novel	2730	16	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_1	43.3705367756454	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	-11	True	NA	23	True	AATAAA	-17	NA	151085858	151144434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_151086061_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151138142_151138314_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
transcript_171314.known	chr7	-	1818	2	FSM	ENSG00000164900.5	ENST00000297537.5	1818	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTCTGTAGAAATTCT	1	True	NA	NA	False	AAGAAA	-17	NA	151167694	151148008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151149143_151167010
transcript_171316.known	chr7	-	4527	15	FSM	ENSG00000033050.9	ENST00000287844.7	4527	15	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_14	32.7206013866194	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	10	True	NA	-2	True	AATACA	-15	NA	151227205	151211483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151227162
transcript_17132.known	chr1	+	5629	22	FSM	ENSG00000116698.22	ENST00000515829.6	5629	22	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_14	48.2794210231551	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTATCGATTCTT	24	False	NA	18	True	ATTAAA	-18	NA	183472526	183554190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_17133.known	chr1	+	5788	22	FSM	ENSG00000116698.22	ENST00000347615.6	5788	22	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_14	60.9586678305347	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	-1	True	NA	14	True	ATTAAA	-14	NA	183472501	183554186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_171334.known	chr7	-	2018	14	FSM	ENSG00000082014.17	ENST00000392811.6	2018	14	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_12	22.616692793143	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGTGTGGTCATTGGA	NA	False	NA	-2	True	ATTAAA	-17	NA	151277452	151238972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111_151240248_151240424_151240523_151241491_151241654_151241876_151241979_151242136_151242233_151242480_151242604_151242720_151242844_151243658_151243702_151245459_151245672_151275113_151275252_151277076
transcript_171338.known	chr7	-	1907	13	FSM	ENSG00000082014.17	ENST00000262188.13	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	41.8518385365433	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCAACAATTCTCTATC	-9	True	NA	NA	False	TTTAAA	-4	NA	151248694	151238779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111_151240248_151240424_151240523_151241491_151241654_151241876_151241979_151242136_151242233_151242480_151242604_151242720_151242844_151243658_151243702_151245459_151245672_151248484
transcript_171340.nic	chr7	-	1544	13	NIC	ENSG00000082014.17	novel	2018	14	NA	NA	259	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_11	47.8912976321261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCCGTGTGGTCATT	231	False	NA	-5	True	ATTAAA	-14	NA	151277193	151238975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111_151240248_151240424_151240523_151241491_151241654_151241876_151241979_151242136_151242233_151242480_151242604_151242720_151242844_151243658_151243702_151275113_151275252_151277076
transcript_171365.known	chr7	+	2709	5	FSM	ENSG00000033100.17	ENST00000495645.5	2709	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.097637945018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	-10	True	NA	23	True	ATTAAA	-14	NA	151232488	151238819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151232815_151234085_151234275_151235047_151235613_151236407_151236591_151237373
transcript_171369.known	chr7	+	3978	4	FSM	ENSG00000033100.17	ENST00000035307.7	3989	4	16	-5	10	5	multi-exon	FALSE	canonical	3	88	junction_2	19.3275853524323	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGTCTAGGGAAAATTG	0	True	NA	31	True	ATTAAA	-22	NA	151232498	151238827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151234275_151235047_151235613_151236407_151236591_151237373
transcript_17137.known	chr1	+	3985	22	FSM	ENSG00000116698.22	ENST00000508461.5	3985	22	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	107.905119152101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGGCAGATGGGAGAAG	-3	True	NA	-73	True	NA	NA	NA	183472499	183552263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_171372.nnic	chr7	+	3809	3	FSM	ENSG00000033100.17	ENST00000692651.1	2795	3	-873	-141	-3	0	multi-exon	FALSE	canonical	3	11	junction_2	59	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTAGGTCTAGGGAA	-19	True	NA	26	True	ATTAAA	-17	NA	151232479	151238822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151234275_151235047_151235613_151237373
transcript_171374.nic	chr7	+	5591	2	FSM	ENSG00000033100.17_ENSG00000284191.1	ENST00000690444.1	1852	2	-894	-2845	-24	0	multi-exon	FALSE	canonical	3	129	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTAGGTCTAGGGAA	5291	False	NA	26	True	ATTAAA	-17	NA	151232458	151238822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151234275_151235047
transcript_171375.known	chr7	+	3107	15	FSM	ENSG00000013374.17	ENST00000413040.7	3107	15	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_12	92.4201806745603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	-25	True	NA	16	True	AATAAA	-23	NA	151341771	151378449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374202_151375847_151375944_151376633_151376812_151377046
transcript_171377.known	chr7	+	3109	15	FSM	ENSG00000013374.17	ENST00000568733.6	3109	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	110.124234112095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	15	True	NA	16	True	AATAAA	-23	NA	151341811	151378449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_171384.known	chr7	+	1703	9	FSM	ENSG00000013374.17	ENST00000468404.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_8	107.314301819469	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	7	True	NA	31	True	AATAAA	-28	NA	151341803	151361249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_171397.known	chr7	-	2038	6	FSM	ENSG00000187260.16	ENST00000334493.11	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	20.5679362114919	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCCTGTGTCCTCTTTT	-5	True	NA	-4	True	AATATA	-18	NA	151410038	151381123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151385087_151385224_151395775_151396197_151400099_151400242_151409426
transcript_171398.known	chr7	-	1542	6	FSM	ENSG00000187260.16	ENST00000621812.2	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	33.0732520324204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-6	True	NA	-1	True	AATATA	-21	NA	151410705	151381120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151385087_151385224_151395775_151396197_151400099_151400242_151410592
transcript_171399.known	chr7	-	1691	6	FSM	ENSG00000187260.16	ENST00000469830.2	1691	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	34.960549194771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGCTCCTGTGTCCTC	1068	False	NA	-8	True	AATATA	-14	NA	151409631	151381127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151385087_151385288_151395775_151396197_151400099_151400242_151409426
transcript_171406.known	chr7	-	1905	5	FSM	ENSG00000187260.16	ENST00000628331.1	1905	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	37.9143772202578	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-5	True	NA	-1	True	AATATA	-21	NA	151410038	151381120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151395775_151396197_151400099_151400242_151409426
transcript_171408.nnic	chr7	-	2981	5	NNC	ENSG00000187260.16	novel	1381	2	NA	NA	3	-1852	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	29.4788059459674	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGGGAACAAGTACCCA	-2	True	NA	NA	False	AAGAAA	-13	NA	151410035	151382979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_151384653_151385087_151385224_151395775_151396197_151400099_151400242_151409426
transcript_171411.known	chr7	+	704	4	FSM	ENSG00000243836.6	ENST00000480632.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.195028426722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	-18	True	NA	31	True	AATAAA	-33	NA	151409235	151413048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151409383_151411669_151411793_151411966_151412071_151412718
transcript_171417.nic	chr7	-	3593	4	ISM	ENSG00000187260.16	ENST00000334493.11	2038	6	-174	1856	-174	-1852	5prime_fragment	FALSE	canonical	3	51	junction_3	13.29995822884	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGGGAACAAGTACCCA	487	False	NA	NA	False	AAGAAA	-13	NA	151410212	151382979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_151385224_151395775_151396197_151400099_151400242_151409426
transcript_171420.nic	chr7	+	2432	3	ISM	ENSG00000243836.6	ENST00000691372.1	663	5	783	0	-476	0	intron_retention	FALSE	canonical	3	32	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	832	False	NA	31	True	AATAAA	-33	NA	151410085	151413048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_151411313_151411669_151411793_151411966
transcript_171425.known	chr7	-	1989	4	FSM	ENSG00000127377.10	ENST00000337323.3	1989	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGGCAGCTTGTAATT	NA	False	NA	NA	False	AAAACA	-18	NA	151440141	151428831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151430181_151436179_151436326_151437995_151438245_151439896
transcript_171431.known	chr7	-	1153	9	FSM	ENSG00000106615.10	ENST00000478470.5	1153	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	782.722172932389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGAGTTCACTTCCATT	240	False	NA	NA	False	NA	NA	NA	151519851	151466952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151498088_151498181_151519459
transcript_171432.known	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_6	118.998199266087	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	3	True	NA	-4	True	AATAAA	-19	NA	151519895	151466011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
transcript_171434.known	chr7	-	744	8	FSM	ENSG00000106615.10	ENST00000496004.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	629.095041649965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGGAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	151520120	151467100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519897
transcript_171437.known	chr7	-	2318	12	FSM	ENSG00000106617.15	ENST00000418337.6	2318	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_11	18.8122520301606	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAAGAAGTTATTT	6	True	NA	37	True	ATTAAA	-21	NA	151632353	151556123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068
transcript_171442.known	chr7	-	3279	16	FSM	ENSG00000106617.15	ENST00000287878.9	3279	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	55.2140883792855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTTGTTAAAGAAGTTA	3	True	NA	34	True	ATTAAA	-18	NA	151877115	151556126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068_151632139_151675419_151675638_151781151_151781432_151786469_151786542_151876506
transcript_171443.known	chr7	+	1064	2	FSM	ENSG00000239911.3	ENST00000467458.3	1076	2	6	6	6	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGCCTTTTTTTAA	-17	True	NA	22	True	ATTAAA	-23	NA	151877464	151879223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151877867_151878561
transcript_171445.nnic	chr7	+	2897	13	NIC	ENSG00000178234.13	novel	2739	12	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	90.0435080021505	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	-70	True	NA	11	True	AATAAA	-16	NA	152025637	152122340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_152025885_152079286_152079409_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_171448.known	chr7	+	2739	12	FSM	ENSG00000178234.13	ENST00000430044.7	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_8	19.839438141871	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	-34	True	NA	11	True	AATAAA	-16	NA	152025673	152122340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152025885_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_171450.nic	chr7	+	2634	12	NIC	ENSG00000178234.13	novel	2739	12	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	78.9543230226625	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	-59	True	NA	11	True	AATAAA	-16	NA	152025648	152122340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_152025885_152094319_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_171458.known	chr7	+	1764	1	FSM	ENSG00000261455.1	ENST00000564834.1	1764	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACGTATGTTTTTTTATT	NA	False	NA	12	True	AATAAA	-23	NA	152463785	152465549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152463800_152465500
transcript_171459.known	chr7	-	4771	3	FSM	ENSG00000196584.3	ENST00000359321.2	4771	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	10	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGATGTCTTTTGTTT	12	True	NA	-29	True	TATAAA	-1	NA	152676141	152644775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_152649364_152660700_152660783_152676040
transcript_171478.known	chr7	+	2213	12	FSM	ENSG00000133627.18	ENST00000256001.13	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	50.8935041074063	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTGTAGTGTGGTGG	-28	True	NA	19	True	AATAAA	-26	NA	152759751	152855378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_17149.nic	chr1	+	2683	17	ISM	ENSG00000116698.22	ENST00000507469.5	4642	23	-169	8059	118	0	5prime_fragment	FALSE	canonical	3	211	junction_14	43.7706647624868	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAATGAAGCCTT	6	True	NA	NA	False	NA	NA	NA	183472333	183546129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965
transcript_171495.known	chr7	+	1692	11	FSM	ENSG00000133627.18	ENST00000397282.2	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	64.1697748164975	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAATAAAATGTTTAAA	8	True	NA	-17	True	NA	NA	NA	152759787	152854949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152759927_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_17150.nic	chr1	+	4061	17	ISM	ENSG00000116698.22	ENST00000347615.6	5788	22	-1408	8057	-1122	0	5prime_fragment	FALSE	canonical	3	126	junction_14	61.2183591743523	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAATGAAGCCTT	605	False	NA	NA	False	NA	NA	NA	183471093	183546129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965
transcript_171500.known	chr7	+	1566	10	FSM	ENSG00000133627.18	ENST00000377776.7	1566	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	105.157142845163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTATTTTTGTAAATA	-31	True	NA	-28	True	NA	NA	NA	152759748	152854938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152854457
transcript_171517.known	chr7	+	3768	26	FSM	ENSG00000130226.17	ENST00000332007.7	3768	26	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_14	6.07104603836933	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	154305109	154893451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_154305552_154446213_154446329_154474938_154475038_154540531_154540627_154566841_154566917_154637820_154637874_154669359_154669442_154727766_154727888_154769416_154769572_154772844_154772943_154794078_154794203_154795844_154795884_154801354_154801463_154803863_154803956_154804916_154804965_154806993_154807113_154853779_154853828_154867994_154868094_154872623_154872694_154875905_154876101_154880887_154880943_154885632_154885745_154887675_154887735_154889271_154889345_154889456_154889531_154892333
transcript_171521.known	chr7	-	3990	22	FSM	ENSG00000157212.19	ENST00000457196.5	3990	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.5553112043627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAATCCTTTATTATT	-11	True	NA	-3	True	AATAAA	-20	NA	155003084	154943686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_154944165_154946364_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154986016_154986180_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_171525.known	chr7	-	3711	21	FSM	ENSG00000157212.19	ENST00000397192.5	3711	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	39.1860625733181	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGAGTAATCCTTTAT	-16	True	NA	-7	True	AATAAA	-16	NA	155002972	154943690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_154944163_154946362_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_17153.known	chr1	+	2483	16	FSM	ENSG00000116698.22	ENST00000419169.5	2483	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	87.9147061392777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAATGAAGCCTT	-1	True	NA	NA	False	NA	NA	NA	183472501	183546129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965
transcript_171533.known	chr7	+	2256	1	FSM	ENSG00000273344.1	ENST00000608317.1	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	-12	True	NA	28	True	AATAAA	-38	NA	155003447	155005703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155003400_155005700
transcript_171534.known	chr7	-	1624	1	FSM	ENSG00000273117.1	ENST00000609974.1	1624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTCTGACTCTGT	1452	False	NA	-9	True	AATAAA	-16	NA	155297541	155295917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_155295900_155297500
transcript_171537.nic	chr7	+	1339	7	NIC	ENSG00000186480.13	novel	2908	6	NA	NA	0	-162	combination_of_known_junctions	FALSE	canonical	3	65	junction_6	169.016189231157	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTGAACTAAGACTCAAT	0	True	NA	11	True	ATTAAA	-21	NA	155297877	155308595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155303824_155303896_155308240
transcript_171539.nic	chr7	+	3070	7	NIC	ENSG00000186480.13	novel	2908	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_6	169.016189231157	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGTATTTATGTTTG	815	False	NA	15	True	ATTAAA	-12	NA	155297784	155310233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155303824_155303896_155308240
transcript_171544.known	chr7	+	2908	6	FSM	ENSG00000186480.13	ENST00000340368.9	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	25.4950975679639	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	0	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_171552.nic	chr7	+	3026	6	NIC	ENSG00000186480.13	novel	2908	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	149.362110322531	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	858	False	NA	17	True	ATTAAA	-14	NA	155297827	155310235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_155298028_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_171556.known	chr7	+	1127	4	FSM	ENSG00000186480.13	ENST00000342407.5	1127	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	176.54146506951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCAGCAGTGATTATA	11	False	NA	NA	False	TTTAAA	-35	NA	155297888	155308757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155297960_155298258_155298698_155302746_155302847_155308240
transcript_171563.known	chr7	-	3956	7	FSM	ENSG00000283128.3	ENST00000636307.1	3956	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.7548438699345	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAACCTGTTCTCATA	-6	True	NA	NA	False	NA	NA	NA	155644406	155500580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_155503106_155506616_155507117_155508893_155509098_155545830_155545944_155576549_155576834_155643467_155643605_155644213
transcript_171565.known	chr7	+	10168	18	FSM	ENSG00000184863.11	ENST00000401878.8	10168	18	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_14	81.7318173381574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTTCCGTAGCCTTCA	-19	True	NA	24	True	AATAAA	-16	NA	155644660	155781480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772_155700945_155706859_155707069_155711202_155711456_155718384_155718444_155737529_155737663_155738059_155738404_155739714_155740027_155741818_155742107_155744960_155745603_155763811_155764019_155766466_155766656_155774558_155774648_155774992
transcript_171566.known	chr7	+	1404	6	FSM	ENSG00000184863.11	ENST00000287912.7	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	18.4282391996631	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGAGTCTGTGGC	-2	True	NA	NA	False	AATAAA	-24	NA	155644450	155701183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772
transcript_171569.known	chr7	-	512	3	FSM	ENSG00000216895.9	ENST00000401694.4	512	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTACCTGGCGTCCCT	-1	True	NA	NA	False	NA	NA	NA	155644401	155611230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_155611418_155643467_155643605_155644213
transcript_171572.known	chr7	-	1356	3	FSM	ENSG00000216895.9	ENST00000460022.6	1356	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGTCTCAGTAATGAT	338	False	NA	-11	True	AATAAA	-16	NA	155644377	155641915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_155642971_155643467_155643605_155644213
transcript_17158.known	chr1	-	2246	1	FSM	ENSG00000232860.9	ENST00000624060.1	2246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTACTAATCATGGTAA	5835	False	NA	NA	False	AATAAA	-16	NA	183472265	183470019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183470000_183472300
transcript_171580.known	chr7	-	597	2	FSM	ENSG00000216895.9	ENST00000469539.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGGTGACAGAGCG	-6	True	NA	NA	False	NA	NA	NA	155644406	155643200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_155643605_155644213
transcript_171581.known	chr7	-	947	4	FSM	ENSG00000182648.14	ENST00000447933.7	957	4	10	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-14	True	NA	2	True	AATAAA	-36	NA	156640567	156472096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_156472712_156605187_156605381_156605657_156605765_156640535
transcript_171583.known	chr7	-	2292	1	FSM	ENSG00000182648.14	ENST00000333319.6	2292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAATTTTTTATTTT	537	False	NA	2	True	AATAAA	-30	NA	156640654	156638362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_156638400_156640700
transcript_171584.known	chr7	-	640	4	FSM	ENSG00000182648.14	ENST00000418309.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCATGCATTTTTATT	-28	True	NA	NA	False	ATTAAA	-17	NA	156640581	156603617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_156603912_156605187_156605381_156605657_156605765_156640535
transcript_17159.known	chr1	-	7266	4	FSM	ENSG00000162704.16	ENST00000359856.11	7266	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	429.392076726569	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGAGTTTATTAATC	1	True	NA	NA	False	AATAAA	-20	NA	183635783	183620845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183627595_183630460_183630638_183633081_183633155_183635516
transcript_171595.nic	chr7	-	4906	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-9	639	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	74.4691368538	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATATTTGGTTTATAAG	NA	False	NA	-25	True	ATTAAA	-18	NA	156893225	156680880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_171596.nic	chr7	-	4262	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	74.4691368538	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGTTTTCAGATTATA	NA	False	NA	NA	False	AATAAA	-12	NA	156893225	156681524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_171597.nic	chr7	-	3357	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-9	-219	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	74.4691368538	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTTATGCCTATTG	NA	False	NA	-6	True	AATAAA	-18	NA	156893225	156682429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_171601.nic	chr7	-	2848	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-9	52	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	74.4691368538	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTCAACCATCCACT	NA	False	NA	-4	True	AATAAA	-16	NA	156893225	156682938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_17162.known	chr1	-	622	4	FSM	ENSG00000162704.16	ENST00000367534.5	622	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	451.605530917808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATCTCTTATTTCT	34	True	NA	NA	False	CATAAA	-8	NA	183635682	183623265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183623472_183630460_183630638_183633081_183633155_183635516
transcript_171626.nic	chr7	-	2892	3	ISM	ENSG00000105983.23	ENST00000434453.1	2229	5	-9	9035	-9	2202	5prime_fragment	FALSE	canonical	0	0	junction_1	152.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGGTAGGGTGCTTGAT	NA	False	NA	NA	False	ATTAAA	-30	NA	156893225	156831275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_156833793_156836808_156836886_156892927
transcript_171627.known	chr7	+	904	4	FSM	ENSG00000105982.17	ENST00000469382.1	904	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATTCTCAAGTACTAA	20	True	NA	NA	False	ATTAAA	-21	NA	156640748	156654921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_156640956_156643800_156643893_156644498_156644758_156654575
transcript_17163.known	chr1	-	5179	12	FSM	ENSG00000198756.12	ENST00000361927.9	5179	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	3.11222595793158	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGATTGTCAATTGCTT	8	True	NA	-3	True	ATTAAA	-18	NA	184037728	183935833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183939038_183940580_183940788_183944195_183944324_183945431_183945565_183951006_183951114_183954761_183954839_183963900_183964021_183969268_183969474_183973615_183973751_183975096_183975215_183978409_183978521_184037094
transcript_171631.known	chr7	+	6082	11	FSM	ENSG00000146909.8	ENST00000275820.4	6082	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	12.5554768925756	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGTAACAGTGAATGT	-12	True	NA	10	True	AATAAA	-20	NA	156949711	156973176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007_156963176_156963904_156964027_156966269_156966403_156966960_156967093_156969086_156969197_156969528
transcript_171637.nic	chr7	+	2117	6	ISM	ENSG00000146909.8	ENST00000275820.4	6082	11	-3	9824	-3	0	5prime_fragment	FALSE	canonical	3	60	junction_1	9.95991967839099	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGTATCTTTTTA	-15	True	NA	16	True	NA	NA	NA	156949708	156963352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007
transcript_171641.known	chr7	+	1041	2	FSM	ENSG00000243479.3	ENST00000480284.1	1041	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATGCTTCAGTGTGTG	-23	True	NA	11	True	AATACA	-24	NA	157010804	157016426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157011308_157015888
transcript_171642.known	chr7	+	5214	23	FSM	ENSG00000009335.18	ENST00000348165.10	5214	23	0	0	0	0	multi-exon	FALSE	canonical	2	140	junction_10	26.9762675006099	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTTGGAGTCCTACC	-21	True	NA	16	True	ATTAAA	-16	NA	157138925	157269370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157139339_157163809_157163864_157169047_157169123_157170303_157170451_157174918_157175035_157178689_157178848_157181517_157181672_157182107_157182329_157183877_157184030_157186833_157187022_157201720_157201808_157207397_157207556_157207702_157207936_157216866_157216972_157220688_157220777_157223253_157223352_157225406_157225540_157231079_157231328_157248367_157248581_157253953_157254143_157254243_157254311_157256913_157257045_157267584
transcript_171650.known	chr7	+	2489	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_9	681.616868596689	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGCCTGCTGTCCTTTGT	-6	True	NA	110	True	AATAAA	-21	NA	157337003	157417439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
transcript_17166.known	chr1	+	1834	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	142.903813804951	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	-30	True	NA	17	True	AATAAA	-19	NA	184051698	184074212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
transcript_171662.known	chr7	+	852	8	FSM	ENSG00000105993.15	ENST00000417758.5	852	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1056.81000551428	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGTAAGGAGCAGCTG	0	True	NA	NA	False	AAGAAA	-43	NA	157337009	157385605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157337151_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540
transcript_171669.known	chr7	+	1159	7	FSM	ENSG00000105993.15	ENST00000443280.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	1214.09467871698	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGGCTTTCTGTGGCG	15	True	NA	NA	False	NA	NA	NA	157337024	157416475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157409794_157410002_157416015
transcript_17167.known	chr1	+	1907	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	82.1747376022583	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	1	True	NA	17	True	AATAAA	-19	NA	184051729	184074212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
transcript_171678.known	chr7	-	4860	23	FSM	ENSG00000155093.19	ENST00000389418.9	4860	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	6.22992644186706	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTGGTCTTTATTTGG	7459	False	158587836	1	True	ATTAAA	-15	NA	158587823	157539055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_157540786_157548945_157549020_157568901_157568967_157571439_157571494_157576612_157576780_157578020_157578141_157595237_157595316_157604001_157604076_157621361_157621510_157656356_157656552_157682724_157682938_157898672_157898738_158081297_158081378_158110828_158110916_158133676_158134060_158136654_158136696_158138293_158138516_158166930_158167292_158192326_158192496_158205170_158205274_158316818_158316933_158489734_158489786_158587557
transcript_171685.known	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_28	207.350351741556	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-15	True	NA	-5	True	AATAAA	-12	NA	158704804	158631313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
transcript_17169.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000645963.2	609	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	193.532297046255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	27	True	NA	11	True	AATAAA	-18	NA	184051755	184095845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184093624_184093725_184095689
transcript_171690.known	chr7	-	4049	28	FSM	ENSG00000146918.20	ENST00000356309.8	4049	28	0	0	0	0	multi-exon	TRUE	canonical	3	766	junction_27	76.4805219202652	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACCAAAAATACAAAAT	-15	True	NA	NA	False	NA	NA	NA	158704804	158631168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_171693.nic	chr7	-	3850	28	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_27	235.434391153295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	6028	False	NA	-5	True	AATAAA	-12	NA	158704838	158631313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
transcript_17170.known	chr1	+	1844	4	FSM	ENSG00000198860.14	ENST00000423085.7	1844	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	169.723304233685	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	-4	True	NA	17	True	AATAAA	-19	NA	184051650	184074212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072826
transcript_171701.nic	chr7	-	3797	27	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_4	138.553580518716	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	6028	False	NA	-5	True	AATAAA	-12	NA	158704838	158631313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_17171.known	chr1	+	2219	4	FSM	ENSG00000198860.14	ENST00000643231.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	150.869332720588	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAAACCGACTTCTTT	0	True	NA	NA	False	NA	NA	NA	184051685	184097485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095689
transcript_171712.known	chr7	+	3789	25	FSM	ENSG00000126870.16	ENST00000407559.8	3789	25	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	11.6054943884352	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	-40	True	NA	7	True	ATTAAA	-20	NA	158856557	158946189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_158856751_158869854_158869909_158871141_158871563_158876608_158876692_158879683_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158902596_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
transcript_17172.known	chr1	-	952	1	FSM	ENSG00000271387.1	ENST00000605589.1	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTTGTTTTAATTTTT	863	False	NA	NA	False	ATTAAA	-15	NA	184386704	184385752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184385800_184386700
transcript_171725.known	chr7	-	3854	13	FSM	ENSG00000106018.14	ENST00000262178.7	3854	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	8.33999733546454	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTAAGAACTTGCTC	1	True	NA	1	True	AATAAA	-20	NA	159144867	159028174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_159030790_159031827_159031870_159031937_159032068_159034212_159034305_159034580_159034651_159035951_159036013_159036751_159036903_159043034_159043177_159058480_159058579_159103756_159103855_159109811_159109920_159142445_159142546_159144720
transcript_171729.known	chr7	-	1926	13	FSM	ENSG00000106018.14	ENST00000402066.5	1926	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	14.068039032581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGCAGGTCAGCGCGGT	9	True	NA	-63	True	GGGGCT	-40	NA	159144859	159030517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_159030790_159031827_159031870_159031937_159032068_159034212_159034305_159034580_159034651_159035951_159036013_159036751_159036903_159043034_159043177_159058480_159058579_159103756_159103855_159109811_159109920_159142445_159142546_159144297
transcript_171746.known	chr8	+	10356	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	2.58676593929396	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	3	True	NA	3	True	ATTAAA	-16	NA	406957	477967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_171747.known	chr8	+	2360	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	12.9801531192818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	406807	469871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_171750.nnic	chr8	-	1243	3	NNC	ENSG00000180190.13	novel	2622	5	NA	NA	-54	33602	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	285	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACGTGCAAGTAAATTA	-29	True	NA	-52	True	AAAACA	-15	NA	544888	456200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_457101_494493_494598_544649
transcript_171752.known	chr8	-	3088	3	FSM	ENSG00000180190.13	ENST00000324079.11	3088	3	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	51	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTATTGGTTTGCATG	25	True	NA	-9	True	AATAAA	-19	NA	544834	489945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_492745_494493_494598_544649
transcript_171763.known	chr8	-	1798	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	23.8243572840906	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-21	True	NA	-55	True	ATTAAA	-18	NA	731224	664199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
transcript_171768.nic	chr8	-	564	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-14	9665	-14	0	5prime_fragment	FALSE	canonical	3	238	junction_3	10.2740233382816	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	-35	True	NA	NA	False	AATAAA	-5	NA	731238	673864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_171769.nic	chr8	-	443	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-14	9786	-14	-121	5prime_fragment	FALSE	canonical	3	238	junction_3	10.2740233382816	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCCCAATAATGT	-35	True	NA	NA	False	CATAAA	-13	NA	731238	673985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_17177.nnic	chr1	+	1469	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-326	388	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	194.797330577192	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTGTCTTCTCCCATT	NA	False	NA	13	True	AATAAA	-19	NA	184386702	184620324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_171777.nnic	chr8	+	1807	4	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	2	59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.9473501841901	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTGAATGCTTTAT	3	True	NA	13	True	AATAAA	-13	NA	1763761	1782740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_1763886_1770931_1771598_1780249_1780882_1782355
transcript_171780.known	chr8	+	1958	4	FSM	ENSG00000182372.10	ENST00000635970.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.9473501841901	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTTTACAGAACCCAAA	4	True	NA	6	True	AATAAA	-6	NA	1763814	1782681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763886_1770931_1771598_1780249_1781145_1782355
transcript_17179.known	chr1	+	10293	6	FSM	ENSG00000116667.15	ENST00000235307.7	10293	6	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	35.8139637571716	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGCTTTGTTCTCTTT	14	True	NA	10	True	ATTAAA	-16	NA	184387028	184629019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184387369_184477385_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_171801.known	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	15	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	8	True	NA	27	True	AATATA	-43	NA	1763788	1786570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763886_1770931_1771598_1780249
transcript_171802.known	chr8	+	1769	3	FSM	ENSG00000182372.10	ENST00000519254.2	1769	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	81.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	1	True	NA	NA	False	NA	NA	NA	1763759	1781300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763812_1770931_1771598_1780249
transcript_171805.known	chr8	+	1897	3	FSM	ENSG00000182372.10	ENST00000637156.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	76	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTCTCTCAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	1763799	1781354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763926_1770931_1771598_1780249
transcript_171806.known	chr8	+	1807	3	FSM	ENSG00000182372.10	ENST00000635751.1	1807	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	82	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACCTGTAATCCCAGC	-4	True	NA	NA	False	ACTAAA	-28	NA	1763776	1781225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763942_1770931_1771598_1780249
transcript_171807.nnic	chr8	+	1877	3	NNC	ENSG00000182372.10	novel	1897	3	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	85	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTCTCTCAAAAAAAAAAAA	46	False	NA	NA	False	NA	NA	NA	1763895	1781357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_1763999_1770931_1771598_1780249
transcript_171813.known	chr8	-	579	2	FSM	ENSG00000253982.3	ENST00000518481.2	621	2	42	0	36	0	multi-exon	FALSE	canonical	3	264	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGTGGGAAAACGTTG	1528	False	NA	-20	True	AATAAA	-27	NA	1763297	1762624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_1762929_1763022
transcript_171816.known	chr8	+	5648	29	FSM	ENSG00000104728.16	ENST00000349830.8	5648	29	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	32.4889306109773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	-16	True	NA	30	True	AATAAA	-22	NA	1823925	1958641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
transcript_171825.known	chr8	+	5472	28	FSM	ENSG00000104728.16	ENST00000520359.5	5472	28	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	29.0515836578929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	17	False	NA	30	True	AATAAA	-22	NA	1823987	1958641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
transcript_171827.known	chr8	+	614	6	FSM	ENSG00000036448.10	ENST00000621894.4	614	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.85472369909914	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAAGTATGGCGGGGA	11	True	NA	NA	False	NA	NA	NA	2127796	2144843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_2127882_2129126_2129233_2140722_2140887_2142374_2142398_2143400_2143457_2144663
transcript_171830.known	chr8	+	8008	14	FSM	ENSG00000147316.15	ENST00000344683.10	8008	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	42.0102833283167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTCTCACTCTGGAA	-5	True	NA	NA	False	AATAAA	-27	NA	6406626	6648508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392_6445548_6455142_6455253_6477593_6477632_6480713_6480877_6499851_6499930_6621453_6621692_6642993
transcript_171832.known	chr8	+	3773	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	20.6318556942354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTGTTGCTGTTGT	614	False	NA	23	True	AATAAA	-31	NA	6406591	6447419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
transcript_171836.known	chr8	-	2413	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGATTTTGGAG	6	True	NA	NA	False	AATAAA	-25	NA	6406548	6403550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_6405121_6405705
transcript_171837.known	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	12	True	NA	-16	True	AATAAA	-15	NA	6406542	6405405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_6405400_6406500
transcript_171838.known	chr8	+	5237	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_7	59.7805510656625	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	-10	True	NA	16	True	AATAAA	-22	NA	6708641	6761503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_171844.known	chr8	-	4773	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	4.87909372276815	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTGAGCACCTATCA	-11	True	NA	NA	False	AATAAA	-20	NA	6835524	6808516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
transcript_171846.nnic	chr8	-	2327	6	NIC	ENSG00000275591.5	novel	4773	7	NA	NA	-7	-2243	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	7.74596669241483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCTCTTGGTAAGATA	-18	True	NA	-19	True	AATATA	-20	NA	6835531	6810759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_6812340_6815806_6815919_6821868_6822039_6825164_6825350_6832716_6832901_6835435
transcript_171854.known	chr8	-	1587	4	FSM	ENSG00000255378.1	ENST00000528972.1	1587	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTGACTGCTGTGCT	NA	False	NA	NA	False	AATAAA	-21	NA	7781413	7778590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_7779794_7780021_7780090_7780334_7780397_7781159
transcript_171857.nnic	chr8	+	2634	3	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-344	-112833	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	17.5	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGCAGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	8059227	8067694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_8059675_8065119_8065188_8065575
transcript_171860.nnic	chr8	+	3030	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-344	-112825	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTATGGTGGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	8059227	8067702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_8059675_8065119
transcript_171861.nnic	chr8	+	2539	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-309	-112825	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTATGGTGGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	8059262	8067702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_8059675_8065575
transcript_171862.nnic	chr8	+	1245	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-268	-119841	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTATGGTGGTGTGTG	NA	False	NA	NA	False	AAAAAG	-17	NA	8059303	8060686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_8059675_8059812
transcript_171879.known	chr8	+	894	7	FSM	ENSG00000173295.9	ENST00000523992.2	894	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.7028133388609	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCCCACCCCAGCCT	14	True	NA	NA	False	NA	NA	NA	8228604	8237275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_8228701_8230842_8230906_8232793_8232875_8234482_8234585_8235815_8235950_8236031_8236300_8237125
transcript_171891.known	chr8	-	4845	6	FSM	ENSG00000275342.5	ENST00000615670.5	4845	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1.93907194296653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCTTTATCCTTAA	-6	True	NA	-18	True	ATTAAA	-23	NA	8386439	8317735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_8319303_8327709_8328462_8339477_8339636_8376246_8378079_8381417_8381835_8386320
transcript_171892.nic	chr8	-	3534	3	ISM	ENSG00000275342.5	ENST00000615670.5	4845	6	-112	57457	-112	-57457	5prime_fragment	FALSE	canonical	3	21	junction_2	0.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTTTGTGTTAGCATG	87	False	NA	NA	False	AAGAAA	-5	NA	8386551	8375192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_8378079_8381417_8381835_8386320
transcript_171893.known	chr8	+	2160	1	FSM	ENSG00000253958.2	ENST00000519106.2	2160	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCAGTATAGCCACAAAA	11	True	NA	18	True	AATAAA	-15	NA	8701936	8704096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_8701900_8704100
transcript_171895.known	chr8	-	6399	3	FSM	ENSG00000147324.11	ENST00000276282.7	6399	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	12.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTATTCCCAGAACTT	-27	True	NA	-29	True	AATAAA	-21	NA	8893630	8783353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_8786056_8797364_8797492_8890060
transcript_171898.known	chr8	+	2107	8	FSM	ENSG00000104626.15	ENST00000519292.5	2107	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_7	63.163862052504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	NA	False	NA	31	True	AATAAA	-14	NA	9002843	9033338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791_9030082_9032548
transcript_171900.known	chr8	+	4521	7	FSM	ENSG00000104626.15	ENST00000250263.8	4521	7	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	19.0408916691303	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	-17	True	NA	31	True	AATAAA	-14	NA	9002896	9033338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791
transcript_171903.nnic	chr8	+	1796	7	NIC	ENSG00000104626.15	novel	2107	8	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	66.285786979982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	-6	True	NA	31	True	AATAAA	-14	NA	9002864	9033338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9032548
transcript_171906.known	chr8	-	5510	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGTCCTTCTATTC	2	True	NA	NA	False	AATAAA	-17	NA	9150658	9136254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9141669_9150562
transcript_171909.nnic	chr8	-	1739	2	NNC	ENSG00000253252.2	novel	328	2	NA	NA	4	26879	intron_retention	FALSE	canonical	3	50	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGTTTATGGAAGAATA	884	False	NA	NA	False	AATAAA	-43	NA	9182515	9153371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_9155059_9182463
transcript_17191.known	chr1	-	2260	2	FSM	ENSG00000285847.2	ENST00000653410.1	2260	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAATTATAATGTTCAT	NA	False	NA	NA	False	AATGAA	-36	NA	184672166	184663024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184665147_184672028
transcript_171911.known	chr8	-	328	2	FSM	ENSG00000253252.2	ENST00000521298.2	328	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGGAAGTCATCAAAAT	880	False	NA	-15	True	AATAAA	-25	NA	9182519	9180250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9180523_9182463
transcript_171914.known	chr8	+	9622	27	FSM	ENSG00000173273.16	ENST00000310430.11	9622	27	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_13	17.5155045433548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTGTGGATAGCAGTT	-9	True	NA	15	True	AATAAA	-16	NA	9555911	9782346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9776649
transcript_171918.nic	chr8	+	4392	26	ISM	ENSG00000173273.16	ENST00000310430.11	9622	27	-20	11637	-20	-6220	5prime_fragment	FALSE	canonical	3	141	junction_13	17.3792519977127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAATAACTAAATATA	4114	False	NA	NA	False	AATAAA	-14	NA	9555891	9770709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105
transcript_171922.nic	chr8	+	1697	10	ISM	ENSG00000173273.16	ENST00000520408.5	1964	11	-22	384	-20	-384	5prime_fragment	FALSE	canonical	3	152	junction_8	19.9115327336313	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTAATGAAAAAAATAAAG	4114	False	NA	NA	False	NA	NA	NA	9555891	9710025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954
transcript_171923.known	chr8	+	1964	11	FSM	ENSG00000173273.16	ENST00000520408.5	1964	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	18.8947082539001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGATCCTTTAATGTC	-7	True	NA	NA	False	AATAAA	-15	NA	9555913	9710409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141
transcript_171924.known	chr8	-	1377	1	FSM	ENSG00000272267.2	ENST00000607598.2	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTCTCTGAAATTTTA	NA	False	NA	5	True	ATTAAA	-23	NA	9556520	9555143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9555100_9556500
transcript_171927.known	chr8	-	2903	3	FSM	ENSG00000253230.10	ENST00000665174.1	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	54	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	4887	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900199_9900554_9900613_9900688
transcript_171928.known	chr8	-	3001	3	FSM	ENSG00000253230.10	ENST00000519461.2	3001	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	45.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	4887	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900287_9900544_9900613_9900688
transcript_171929.known	chr8	-	3064	2	FSM	ENSG00000253230.10	ENST00000669913.1	3064	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTCCCAAGTCCCAT	4887	False	NA	-33	True	AATAAA	-3	NA	9903398	9900076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900287_9900544
transcript_17193.known	chr1	-	6837	20	FSM	ENSG00000116406.20	ENST00000318130.13	6837	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	8.45715943484402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATCCAGCGCTTGCTC	-15	True	NA	NA	False	AATAAA	-21	NA	184754858	184690236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184694473_184702810_184702997_184706642_184706809_184708152_184708345_184710393_184710548_184711722_184711878_184712432_184712599_184716887_184717013_184717539_184717624_184719161_184719246_184719442_184719569_184721288_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184749546_184749593_184754488
transcript_171930.known	chr8	-	3252	2	FSM	ENSG00000253230.10	ENST00000654192.1	3252	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCAAGTCCCATCTACAA	4887	False	NA	-27	True	AATAAA	-9	NA	9903398	9900070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900613_9900688
transcript_171931.known	chr8	-	3334	1	FSM	ENSG00000253230.10	ENST00000517675.1	3334	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	4888	False	NA	-20	True	AATAAA	-16	NA	9903397	9900063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900100_9903400
transcript_171932.known	chr8	+	1512	6	FSM	ENSG00000175806.15	ENST00000317173.9	1512	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.06630035524124	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGACATCTCCTCTGT	-24	True	NA	NA	False	AATAAA	-24	NA	10054291	10428891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_10054659_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_171938.nnic	chr8	-	3040	5	NNC	ENSG00000253649.5	novel	1123	5	NA	NA	-26666	1585	intron_retention	FALSE	canonical	3	10	junction_2	9.02773504263389	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTATCTGGCTTCC	NA	False	NA	-8	True	AATAAA	-15	NA	10574251	10481292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_10483232_10484086_10484247_10497711_10497972_10498727_10498809_10573651
transcript_17194.known	chr1	-	6678	21	FSM	ENSG00000116406.20	ENST00000367512.8	6678	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.2875463420238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAATTTTTAGAATCA	NA	False	NA	0	True	AATAAA	-27	NA	184754907	184690492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184694473_184701496_184701545_184702810_184702997_184706642_184706809_184708152_184708345_184710393_184710548_184711722_184711878_184712432_184712599_184716887_184717013_184717539_184717624_184719161_184719246_184719442_184719569_184721288_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184749546_184749593_184754488
transcript_171940.known	chr8	-	1753	6	FSM	ENSG00000258724.1	ENST00000554914.1	1753	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.7301527103386	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCCCTTCTGGTCCA	-10	True	NA	NA	False	NA	NA	NA	10839847	10725398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10726667_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_171942.known	chr8	-	1546	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	30.6865877325366	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	7	True	NA	-6	True	ATTAAA	-17	NA	10839875	10764960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_171944.known	chr8	-	1272	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	72.1470720126604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCAGCAAGAGAGTTT	6	True	NA	-8	True	AATAAA	-19	NA	10839876	10765158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_171946.known	chr8	-	3215	2	FSM	ENSG00000171056.8	ENST00000304501.2	3215	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCTATCTTTTGAAATA	-1	True	NA	NA	False	AATAAA	-17	NA	10730511	10723767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10726667_10730195
transcript_17195.known	chr1	-	6884	14	FSM	ENSG00000135842.17	ENST00000367511.4	6884	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.04423890673421	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACCAGATGTCATTT	-12	True	NA	-6	True	AATAAA	-16	NA	184974508	184791031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184796098_184798078_184798191_184803584_184803693_184805945_184806057_184808073_184808236_184818637_184818826_184823166_184823330_184823637_184823743_184831846_184831963_184884632_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
transcript_171952.known	chr8	+	3503	11	FSM	ENSG00000104643.10	ENST00000530200.1	3503	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	53.7155470976513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACAGCCTCACTTTTT	-2	True	NA	NA	False	NA	NA	NA	11284826	11324527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11285071_11295193_11295303_11297899_11297952_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_171954.known	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	14.0773875241883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	-13	True	NA	20	True	AATAAA	-33	NA	11284815	11328146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_171963.known	chr8	+	1421	8	FSM	ENSG00000154316.16	ENST00000534302.5	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16653584115759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	NA	False	NA	NA	False	ATTAAA	-17	NA	11347644	11366088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11361634_11361808_11364719_11364990_11365582
transcript_171964.known	chr8	-	4067	3	FSM	ENSG00000154319.16	ENST00000284486.9	4067	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAAAATGCTTGTCC	-3	True	NA	-13	True	AATAAA	-37	NA	11466753	11421475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11424637_11444030_11444809_11466625
transcript_171966.known	chr8	-	1099	2	FSM	ENSG00000255020.1	ENST00000525867.1	1099	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCTTGCCCTTGAAT	4	True	NA	NA	False	AATAAA	-15	NA	11347502	11345747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11346641_11347296
transcript_171967.known	chr8	+	2415	3	FSM	ENSG00000286985.2	ENST00000682432.1	2415	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATCTACCGACAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	11633097	11649333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11633328_11643331_11643520_11647336
transcript_171970.nic	chr8	+	2729	2	ISM	ENSG00000286985.2	ENST00000682432.1	2415	3	9690	0	9690	0	3prime_fragment	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATCTACCGACAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	11642787	11649333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_11643520_11647336
transcript_171981.known	chr8	+	3508	8	FSM	ENSG00000136574.19	ENST00000622443.3	3508	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	176.521837696285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTCCCTCGTCCCTTA	13	True	NA	21	True	AATAAA	-13	NA	11704221	11759994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11704305_11705913_11706034_11707855_11708929_11748918_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_171983.known	chr8	+	2614	7	FSM	ENSG00000136574.19	ENST00000528712.5	2614	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	195.60454720913	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGTCCCTTAGTGGTC	-1	True	NA	27	True	AATAAA	-19	NA	11676958	11760000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11677064_11700510_11700779_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_171990.known	chr8	+	3419	7	FSM	ENSG00000136574.19	ENST00000532059.6	3419	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	111.951874581099	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTCCCTTAGTGGTCTT	-7	True	NA	29	True	AATAAA	-21	NA	11704201	11760002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11704305_11707855_11708929_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_171991.known	chr8	+	3414	7	FSM	ENSG00000136574.19	ENST00000335135.8	3414	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	42.2035411889676	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTCCCTTAGTGGTCTT	-5	True	NA	29	True	AATAAA	-21	NA	11704203	11760002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11704305_11707855_11708929_11748918_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_171995.nic	chr8	+	2916	6	NIC	ENSG00000136574.19	novel	3419	7	NA	NA	-527	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	164.705069745895	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTCCCTCGTCCCTTA	3272	False	NA	21	True	AATAAA	-13	NA	11703623	11759994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_11704305_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_171997.known	chr8	+	686	5	FSM	ENSG00000136574.19	ENST00000526716.5	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	174.122083608025	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACGCGCCATGGCTGGGG	200	False	NA	NA	False	NA	NA	NA	11704150	11757082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11704305_11748915_11749086_11750110_11750237_11755045_11755134_11756934
transcript_17200.known	chr1	+	3407	7	FSM	ENSG00000121481.11	ENST00000367510.8	3407	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	38.3525314244923	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGCAACCTCTATTCT	16	True	NA	9	True	ATTAAA	-25	NA	185045557	185102603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185093060_185093277_185098071_185098345_185099790_185099963_185100199
transcript_172001.known	chr8	+	877	3	FSM	ENSG00000136574.19	ENST00000532977.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACGAGGCGGGCGGCCC	0	True	NA	NA	False	NA	NA	NA	11676959	11708360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11677064_11700510_11700779_11707855
transcript_172008.nic	chr8	+	3041	2	ISM	ENSG00000136574.19	ENST00000532059.6	3419	7	-252	49461	-201	2160	5prime_fragment	FALSE	canonical	3	423	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCGGTCGTGGTGGCGCG	-1	True	NA	NA	False	AATACA	-17	NA	11703949	11710541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_11704305_11707855
transcript_172009.nic	chr8	+	3208	2	ISM	ENSG00000136574.19	ENST00000532059.6	3419	7	-246	49288	-195	2333	5prime_fragment	FALSE	canonical	3	423	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGTCCAGGGAGAGTT	5	True	NA	NA	False	NA	NA	NA	11703955	11710714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_11704305_11707855
transcript_172010.known	chr8	+	2323	6	FSM	ENSG00000154328.16	ENST00000455213.6	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	63.8172390502754	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	-39	True	NA	12	True	AATAAA	-12	NA	11769698	11787340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11769792_11770173_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_172014.known	chr8	+	2226	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	47.1274866717927	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	NA	False	NA	17	True	AATAAA	-17	NA	11769638	11787345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_172016.known	chr8	+	2699	5	FSM	ENSG00000154328.16	ENST00000284503.7	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	33.8045854877707	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	-28	True	NA	17	True	AATAAA	-17	NA	11769709	11787345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_172019.known	chr8	+	2016	4	FSM	ENSG00000154328.16	ENST00000403422.7	2016	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	84.040995287353	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	-29	True	NA	17	True	AATAAA	-17	NA	11769708	11787345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11769792_11779597_11779951_11783202_11783400_11785962
transcript_172020.known	chr8	+	554	4	FSM	ENSG00000154328.16	ENST00000528113.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	86.6717947200818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAAGGCAGACCGCAG	-28	True	NA	NA	False	NA	NA	NA	11769709	11786097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11769792_11771445_11771586_11783202_11783400_11785962
transcript_172021.nnic	chr8	+	2532	4	NIC	ENSG00000154328.16	novel	2699	5	NA	NA	27	0	intron_retention	FALSE	canonical	2	3	junction_1	87.1932719116944	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	-1	True	NA	17	True	AATAAA	-17	NA	11769736	11787345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_11770336_11779597_11779951_11783202_11783400_11785962
transcript_17203.known	chr1	+	1677	6	FSM	ENSG00000121481.11	ENST00000367509.8	1677	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	130.341704760986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGAGAGTGCTTTTTT	-16	True	NA	21	True	ATTAAA	-29	NA	185045525	185101057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185098071_185098345_185099790_185099963_185100199
transcript_172031.known	chr8	+	1773	9	FSM	ENSG00000079459.13	ENST00000525607.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	1322.69818930851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	-17	True	NA	-97	True	NA	NA	NA	11802740	11838839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_172041.known	chr8	+	2035	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	2415	junction_3	304.397766089043	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTACAGTTCGCT	-17	True	NA	14	True	AATAAA	-19	NA	11802740	11839298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_172048.known	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1025.20908768377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	8	True	NA	-31	True	NA	NA	NA	11802765	11838905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_17205.known	chr1	-	4361	15	FSM	ENSG00000121486.12	ENST00000367506.10	4361	15	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_13	16.9598866476767	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGAGTTAAGGAAACCAG	-7	True	NA	-22	True	ATTAAA	-16	NA	185156953	185118100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_185120272_185120382_185120510_185123856_185123920_185124943_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_172053.known	chr8	+	1987	8	FSM	ENSG00000079459.13	ENST00000622850.2	1987	8	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_1	1082.19363388651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	10	False	NA	20	True	AATAAA	-25	NA	11803088	11839304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11803226_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_172065.known	chr8	+	1393	7	FSM	ENSG00000079459.13	ENST00000443614.6	1393	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	1160.93166609122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGTGCCTCATCCCA	-19	True	NA	NA	False	NA	NA	NA	11802738	11838783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_17209.nic	chr1	-	2124	12	ISM	ENSG00000121486.12	ENST00000367506.10	4361	15	-20	6739	-20	0	5prime_fragment	FALSE	canonical	3	144	junction_10	16.910557121182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTTTTAGTAAATC	-27	True	NA	NA	False	AATAAA	-18	NA	185156973	185124839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_172093.known	chr8	+	1558	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	1328.57084869419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	5	False	NA	-74	True	TTTAAA	-29	NA	11802642	11839210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
transcript_172096.known	chr8	+	642	2	FSM	ENSG00000079459.13	ENST00000527045.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTTGTCCCCAGTA	26	True	NA	6	True	AATAAA	-3	NA	11802783	11803815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11803321
transcript_172098.known	chr8	+	1890	7	FSM	ENSG00000079459.13	ENST00000525954.5	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	2415	junction_2	326.541345008561	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAATGTTCGTAATAGT	459	False	NA	31	True	ATTAAA	-21	NA	11808416	11838967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_172101.known	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	214.834378068316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	NA	False	NA	-39	True	NA	NA	NA	11868137	11842559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
transcript_172102.known	chr8	-	1913	10	FSM	ENSG00000164733.22	ENST00000679214.1	1913	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	176.021954298496	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTTGAAGTCTACTCT	36	False	NA	-21	True	AATAAA	-8	NA	11868079	11844328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847816_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_172103.known	chr8	-	3786	10	FSM	ENSG00000164733.22	ENST00000678598.1	3786	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	177.384704338715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGATTCATTCCATG	-1	True	NA	-3	True	AATAAA	-19	NA	11868089	11842523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849216_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_172108.known	chr8	-	3141	2	FSM	ENSG00000284610.1	ENST00000641966.1	3141	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAGAAGAAATATTTGA	NA	False	NA	NA	False	AATATA	-35	NA	12015193	12006187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12008966_12014830
transcript_172111.known	chr8	+	3212	4	FSM	ENSG00000255052.5	ENST00000665207.1	3212	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	5.09901951359278	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGTAATTTACAAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	12115810	12148037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_12116326_12121986_12122161_12145422_12145547_12145638
transcript_172119.nnic	chr8	-	2346	9	NNC	ENSG00000186523.15	novel	2043	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.0234280366741	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	NA	False	NA	NA	False	AATAAA	-21	NA	12194127	12182105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_12183102_12183153_12183707_12185375_12185526_12186699_12186834_12188071_12188174_12188310_12188425_12189807_12189889_12191778_12191842_12193974
transcript_17212.known	chr1	+	3838	19	FSM	ENSG00000116668.13	ENST00000367500.9	3838	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	11.6052616844874	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTAGTTGGTGTAGA	-2	True	NA	105	True	AATAAA	-18	NA	185157166	185291781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_185157315_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
transcript_172142.nnic	chr8	-	2130	7	NNC	ENSG00000186523.15	novel	2403	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.4253408071038	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	NA	False	NA	NA	False	AATAAA	-21	NA	12194127	12182105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_12183102_12183153_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_172145.nnic	chr8	-	2074	7	NNC	ENSG00000186523.15	novel	2254	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.4253408071038	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	12194127	12182109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_12183102_12183205_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_172153.known	chr8	-	2254	6	FSM	ENSG00000186523.15	ENST00000534187.6	2254	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	23.9365828806035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	12194105	12182109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193876
transcript_172154.known	chr8	-	2145	6	FSM	ENSG00000186523.15	ENST00000340537.9	2145	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	17.9064234284795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACAGATGATCTGTGG	NA	False	NA	NA	False	AATAAA	-29	NA	12194082	12182097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_172161.known	chr8	-	922	5	FSM	ENSG00000186523.15	ENST00000524893.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	28.3405628031625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCAAAACTGCCCTCTA	NA	False	NA	NA	False	ATTAAA	-11	NA	12194082	12183479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12183707_12185233_12185526_12186699_12186834_12191778_12191842_12193876
transcript_172167.known	chr8	-	928	3	FSM	ENSG00000186523.15	ENST00000524571.6	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	24.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTTCTGGTACGAGGT	NA	False	NA	NA	False	NA	NA	NA	12194067	12186061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12186834_12191778_12191842_12193974
transcript_172168.known	chr8	+	1361	2	FSM	ENSG00000255495.1	ENST00000528514.1	1361	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATAGCTATTGTCTTTC	NA	False	NA	NA	False	GATAAA	-25	NA	12194466	12196280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_12195438_12195890
transcript_17217.known	chr1	-	1989	1	FSM	ENSG00000279838.1	ENST00000623474.1	1989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAAAAAAAAAGCA	5474	False	NA	NA	False	AATAAA	-11	NA	185294372	185292383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_185292400_185294400
transcript_17218.known	chr1	-	3657	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	493.903346370072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTCTAATGTGTAG	-1	True	NA	-6	True	GATAAA	-15	NA	185317273	185297014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_172187.known	chr8	-	5619	5	FSM	ENSG00000283674.3	ENST00000641839.1	5619	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	31.1809236553377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGGGGAACATCACACA	NA	False	NA	NA	False	ATTAAA	-21	NA	12607664	12505000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12509801_12511121_12511258_12601157_12601399_12601786_12601855_12607290
transcript_17220.known	chr1	-	4113	15	FSM	ENSG00000116679.16	ENST00000367498.8	4113	15	0	0	0	0	multi-exon	TRUE	canonical	3	1367	junction_8	93.6382531286204	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAGATCACTTCTCAT	-1	True	NA	-12	True	AATAAA	-28	NA	185317243	185296387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_172207.nic	chr8	-	2571	3	ISM	ENSG00000283674.3	ENST00000641839.1	5619	5	-20	94289	-20	-4305	5prime_fragment	FALSE	canonical	3	82	junction_2	3.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTATGGTGGTGAGTG	NA	False	NA	NA	False	AAAAAG	-1	NA	12607684	12599289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_12601399_12601786_12601855_12607290
transcript_172212.nic	chr8	-	2958	2	NIC	ENSG00000283674.3	novel	5619	5	NA	NA	-20	-4306	intron_retention	FALSE	canonical	3	82	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTTATGGTGGTGAGT	NA	False	NA	NA	False	NA	NA	NA	12607684	12599290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_12601855_12607290
transcript_172216.nic	chr8	-	3593	12	NIC	ENSG00000154359.13	novel	3618	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	206	junction_7	57.3407964903589	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTAAATTGTAGGT	-38	True	NA	-9	True	AATAAA	-17	NA	12755534	12721905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736765_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
transcript_172217.known	chr8	-	3618	12	FSM	ENSG00000154359.13	ENST00000398246.8	3618	12	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	62.4965453590691	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTAAATTGTAGGT	-30	True	NA	-9	True	AATAAA	-17	NA	12755526	12721905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736798_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
transcript_172223.known	chr8	-	4392	14	FSM	ENSG00000164741.15	ENST00000358919.6	4392	14	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_13	12.524059685498	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTTATGGGTATTTTT	7781	False	NA	NA	False	NA	NA	NA	13133474	13085188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_13085932_13086289_13086464_13088486_13088705_13090251_13090471_13091317_13091433_13092611_13092826_13094758_13094958_13095085_13095246_13098398_13098576_13099346_13100771_13102789_13102854_13110741_13110824_13115585_13115658_13132943
transcript_172230.known	chr8	+	1420	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGCTCTGACTTGTGCG	-13	True	NA	10	True	AATAAA	-22	NA	13566868	13568288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_13566900_13568300
transcript_172232.nic	chr8	+	1562	11	NIC	ENSG00000104723.21	novel	3697	11	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	120.832114936386	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAACTTACTGAAAACT	NA	False	NA	16	True	AATAAA	-19	NA	15540209	15758277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15758029
transcript_172233.known	chr8	+	3697	11	FSM	ENSG00000104723.21	ENST00000503731.6	3697	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	120.832114936386	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTAGCATTTTGTGCT	-3	True	NA	NA	False	NA	NA	NA	15540262	15766638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15764202
transcript_172235.known	chr8	+	3683	10	FSM	ENSG00000104723.21	ENST00000382020.8	3683	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_9	47.0518495195447	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCTTACTGCAGTTT	0	True	NA	NA	False	NA	NA	NA	15540222	15766649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
transcript_172243.known	chr8	+	1546	9	FSM	ENSG00000104723.21	ENST00000506802.5	1546	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	118.27503699006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAAAATTAAACTTACT	10	False	NA	-21	True	GATAAA	-25	NA	15540232	15764613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15764202
transcript_172244.nic	chr8	+	859	7	ISM	ENSG00000155970.12	ENST00000318063.10	3990	15	-14	35653	-14	-3695	5prime_fragment	FALSE	canonical	3	11	junction_6	5.87839736284947	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAGAGAGAAATTAAAG	NA	False	NA	NA	False	NA	NA	NA	17027223	17086989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17027661_17064083_17064238_17069687_17069720_17077782_17077862_17081692_17081741_17085235_17085319_17086963
transcript_172246.nic	chr8	+	801	5	NIC	ENSG00000155970.12	novel	3990	15	NA	NA	-14	3351	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	10.5948100502085	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATACTAGATGCTGC	NA	False	NA	NA	False	GATAAA	-16	NA	17027223	17085318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_17027661_17064083_17064238_17077782_17077862_17081692_17081741_17085235
transcript_172247.known	chr8	+	5924	13	FSM	ENSG00000104219.13	ENST00000262096.13	5924	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.9871642927574	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAGCTGAATACT	-23	True	NA	14	True	AATGAA	-16	NA	17156481	17224799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255
transcript_172256.known	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	TRUE	canonical	3	1101	junction_1	112.242916133813	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	9	True	NA	NA	False	AATAAA	-18	NA	17246857	17224965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_172262.known	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_3	114.621114983235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-12	True	NA	-67	True	ATTAAA	-17	NA	17246878	17231569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_172264.known	chr8	-	432	3	FSM	ENSG00000198791.12	ENST00000628418.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCATTTCATGTATCCTT	11	True	NA	NA	False	AAGAAA	-28	NA	17246855	17243506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_17243546_17245035_17245248_17246674
transcript_172265.known	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.34734496952147	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	10	True	NA	-17	True	AATAAA	-19	NA	17413351	17296793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_172272.known	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	23.3138840625633	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	1	True	NA	12	True	AATAAA	-22	NA	17246957	17298024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_172276.nic	chr8	+	1917	11	ISM	ENSG00000155975.10	ENST00000324849.9	4519	12	-252	11413	-225	0	5prime_fragment	FALSE	canonical	3	298	junction_3	23.1302831802812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGGATATTTTCTGTG	NA	False	NA	17	True	TATAAA	-18	NA	17246705	17286611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346
transcript_172280.known	chr8	+	1307	11	FSM	ENSG00000155975.10	ENST00000521829.5	1307	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	97.145046193823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAAACTGGCATT	84	False	NA	NA	False	NA	NA	NA	17247122	17295052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17247370_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_172286.known	chr8	+	7615	13	FSM	ENSG00000003989.18	ENST00000494857.6	7615	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11.2432078261599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAATGCAGATGTTACC	-2	True	NA	72	True	AATAAA	-17	NA	17497087	17570566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17497238_17502256_17502303_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
transcript_172289.known	chr8	+	2274	12	FSM	ENSG00000003989.18	ENST00000522656.5	2274	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	13.8957154940258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTCATCTGGACAGCAT	1	True	NA	NA	False	NA	NA	NA	17497090	17565274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17497238_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
transcript_172294.known	chr8	+	1508	6	FSM	ENSG00000104213.13	ENST00000251630.11	1508	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	3.37045990927054	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACTTAAAATACATCCA	-2	True	NA	32	True	AATAAA	-28	NA	17577215	17643144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17577308_17589467_17589766_17621050_17621203_17628486_17628781_17634073_17634214_17642612
transcript_172310.nic	chr8	+	1653	9	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-177	74680	-117	0	5prime_fragment	FALSE	canonical	3	140	junction_6	40.6355755465577	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	-1	True	NA	NA	False	AAGAAA	-5	NA	17922850	17953123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_172312.nic	chr8	+	692	4	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-260	18766	-229	-132	5prime_fragment	FALSE	canonical	3	184	junction_2	25.3683967872539	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGTGTAGAAAGTGATA	NA	False	NA	NA	False	AATAGA	-24	NA	17922738	17937189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133
transcript_172313.nic	chr8	+	636	3	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-260	20249	-229	-1615	5prime_fragment	FALSE	canonical	3	184	junction_2	22	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTCCTTACTCTTCA	NA	False	NA	NA	False	NA	NA	NA	17922738	17935706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588
transcript_172315.known	chr8	-	3151	14	FSM	ENSG00000104763.20	ENST00000637244.1	3151	14	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_7	303.289519344765	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTTCCTGACACTCA	-23	True	NA	-77	True	NA	NA	NA	18084980	18056492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_172316.known	chr8	-	2558	14	FSM	ENSG00000104763.20	ENST00000637429.1	2558	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	306.418729632871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAAGACTTGTGGAAAA	-14	True	NA	NA	False	AATAAA	-3	NA	18084971	18056770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084286
transcript_172317.known	chr8	-	2512	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	304.389796032972	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCAGTCAGCAGTCAT	NA	False	NA	-39	True	AATAAA	-14	NA	18084998	18056454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_172318.known	chr8	-	1989	14	FSM	ENSG00000104763.20	ENST00000636920.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	306.418729632871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAGGAAGTTGCTAAC	-21	True	NA	NA	False	NA	NA	NA	18084120	18056834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083940
transcript_172322.known	chr8	-	1975	13	FSM	ENSG00000104763.20	ENST00000636494.1	1975	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_11	273.542653590502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGTAGCATTCATGTA	-27	True	NA	NA	False	TTTAAA	-4	NA	18084126	18056723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18075540_18075588_18083980
transcript_172323.known	chr8	-	2245	13	FSM	ENSG00000104763.20	ENST00000520781.6	2245	13	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_8	345.257261167508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTCAGCAGTCATGCA	-9	True	NA	-36	True	AATAAA	-17	NA	18084108	18056451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_172326.known	chr8	-	929	5	FSM	ENSG00000104763.20	ENST00000637561.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	87.2267160908858	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	809	False	NA	-5	True	AATAAA	-24	NA	18084148	18066762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_172327.known	chr8	-	1056	5	FSM	ENSG00000104763.20	ENST00000636537.1	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	446.49216118539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGGGTGTCTGGGTA	-14	True	NA	-6	True	AATAAA	-23	NA	18084971	18066763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_172328.known	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	451.596335237566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	26	True	NA	-5	True	AATAAA	-24	NA	18084073	18066762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_172332.known	chr8	+	451	4	FSM	ENSG00000245281.8	ENST00000505114.6	451	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTTGTAAAATAAATGC	446	False	NA	NA	False	AATAAA	-21	NA	18084867	18088211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_18084940_18086882_18086937_18087024_18087138_18087999
transcript_172333.known	chr8	-	2328	14	FSM	ENSG00000104763.20	ENST00000636160.1	2328	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	293.836910849394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAACAGTCACTGGA	-21	True	NA	-61	True	NA	NA	NA	18084120	18056476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071412_18075540_18075588_18083980
transcript_172334.known	chr8	-	780	5	FSM	ENSG00000104763.20	ENST00000637805.1	780	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	455.000274725192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAACTGTCCTGTGTGA	-1	True	NA	-27	True	TATAAA	-13	NA	18084817	18066889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084671
transcript_172335.known	chr8	+	1799	3	FSM	ENSG00000171428.15	ENST00000307719.9	1799	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	-5	True	NA	NA	False	AATAAA	-31	NA	18210108	18223689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_18210181_18219410_18219490_18222041
transcript_172337.known	chr8	+	1285	2	FSM	ENSG00000156006.5	ENST00000286479.4	1285	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTCTCTAAAGTTTA	-4	True	NA	10	True	AATAAA	-17	NA	18391281	18401218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_18391346_18399997
transcript_172338.known	chr8	-	11704	16	FSM	ENSG00000156011.18	ENST00000327040.13	11704	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	4.71687278701566	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGGAATGTTTTTATT	26	True	NA	-2	True	AATAAA	-19	NA	19013703	18527302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18535959_18556208_18556353_18572527_18572673_18575127_18575286_18600363_18600435_18632612_18632807_18655641_18655686_18765448_18765539_18799294_18799354_18801269_18801383_18804521_18804603_18804703_18804899_18867673_18868070_18871625_18872734_18936033_18936143_19013562
transcript_172342.known	chr8	+	1984	10	FSM	ENSG00000104611.12	ENST00000519207.5	1984	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	12.737618049708	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTGTACTTGAAAACG	15	False	NA	NA	False	AATAAA	-31	NA	19313975	19394953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_172356.known	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_15	39.9029584586156	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	-15	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
transcript_172366.nic	chr8	+	2272	15	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	-269	7830	-244	0	5prime_fragment	FALSE	canonical	3	269	junction_7	33.7651704378029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATCCTTTTTTCTTGTTT	-6	True	NA	42	True	NA	NA	NA	19817146	19844237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075
transcript_172370.nic	chr8	+	1220	9	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	8	25542	8	37	5prime_fragment	FALSE	canonical	3	269	junction_7	41.6525809524452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAACTAGCTGAAGGAA	-7	True	NA	NA	False	AATAAA	-15	NA	19817423	19826525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425
transcript_172371.nic	chr8	+	971	7	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	8	28002	8	-427	5prime_fragment	FALSE	canonical	3	319	junction_3	34.1601619824419	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCTATTGATTCTTT	-7	True	NA	17	True	AATAAA	-14	NA	19817423	19824065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872
transcript_172376.known	chr8	+	3565	10	FSM	ENSG00000175445.17	ENST00000650287.1	3565	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATTATTTTGTATC	-2	True	NA	10	True	AATAAA	-24	NA	19939252	19967259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_19939529_19948179_19948341_19951768_19951949_19953309_19953422_19954119_19954354_19955840_19956084_19959259_19959381_19960900_19961084_19962114_19962220_19965309
transcript_172377.known	chr8	+	2856	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_8	77.7764205761176	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGACTCTCTATCTT	-6	True	NA	20	True	AATAAA	-23	NA	20197380	20221696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
transcript_172385.known	chr8	-	5706	4	FSM	ENSG00000061337.15	ENST00000381569.5	5706	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	4.18993502999218	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACGTGTATCTGCCCT	-1	True	NA	-1	True	AATAAA	-25	NA	20303963	20246164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_20250364_20252781_20253586_20254836_20255316_20303739
transcript_172387.known	chr8	+	4870	28	FSM	ENSG00000130227.17	ENST00000252512.14	4870	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.3505825769215	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	-18	True	NA	35	True	AATAAA	-20	NA	21919661	22006585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_21974669_21974775_21976355_21976522_21977769_21977844_21980083_21980204_21981730_21981878_21982639_21982813_21984645_21984840_21985585_21985692_21987140_21987277_21987783_21987858_21989002_21989084_21990343_21990408_21990810_21990920_21991867_21991975_21994362_21994452_21995491_21995600_21998754_21998838_21999090_21999306_21999535_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_172398.nnic	chr8	+	2050	6	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	89.9399799866555	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	-15	True	NA	35	True	AATAAA	-20	NA	21919664	22006585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_21919721_21999659_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_172402.known	chr8	+	1874	9	FSM	ENSG00000158806.14	ENST00000397940.5	1874	9	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	3.37036719067819	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTTCTCTTCCCTGG	-1	True	NA	NA	False	AATAAA	-15	NA	22024133	22036896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22024624_22024723_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_172410.known	chr8	+	1706	5	FSM	ENSG00000158815.11	ENST00000518533.5	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	148.137393996249	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTTATCTGAAGCGG	9	False	NA	23	True	AATAAA	-14	NA	22042397	22048806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22042964_22043144_22043182_22046146_22046292_22046526_22046634_22047955
transcript_172411.known	chr8	+	1320	5	FSM	ENSG00000158815.11	ENST00000359441.4	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	104.564274491817	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTATCTGAAGCGGGGC	-2	True	NA	26	True	AATAAA	-17	NA	22042819	22048809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22042964_22043144_22043182_22046113_22046292_22046526_22046634_22047955
transcript_172412.nic	chr8	+	2744	16	NIC	ENSG00000158856.19	novel	601	7	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	13.4742552876052	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTTTCCTTATG	-57	True	NA	6	True	ATTAAA	-19	NA	22048930	22082524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22049225_22066704_22066894_22067084_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22080617_22080626_22080804_22080871_22081112_22081194_22081349
transcript_172417.known	chr8	+	2601	15	FSM	ENSG00000158856.19	ENST00000381470.7	2601	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.977023218577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTTTCCTTATG	10	True	NA	6	True	ATTAAA	-19	NA	22053569	22082524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22053787_22066704_22066894_22067084_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22080617_22080626_22081112_22081194_22081349
transcript_172419.nic	chr8	+	2758	15	ISM	ENSG00000158856.19	ENST00000523266.5	2735	16	7191	-6	-101	0	3prime_fragment	FALSE	canonical	0	0	junction_11	13.523411295277	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTTTCCTTATG	6963	False	NA	6	True	ATTAAA	-19	NA	22066396	22082524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_22066894_22067084_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22080617_22080626_22080804_22080871_22081112_22081194_22081349
transcript_172421.nic	chr8	+	2692	14	ISM	ENSG00000158856.19	ENST00000415253.5	2394	15	7049	-6	-101	0	3prime_fragment	FALSE	canonical	0	0	junction_11	13.4243442205375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTTTCCTTATG	6963	False	NA	6	True	ATTAAA	-19	NA	22066396	22082524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_22066894_22067084_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22080617_22080626_22081112_22081194_22081349
transcript_172432.known	chr8	+	4316	17	FSM	ENSG00000158863.22	ENST00000289921.8	4316	17	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_1	12.9783473524174	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTGGAGGGGTGGG	-4	True	NA	NA	False	AATAAA	-14	NA	22089149	22104911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22089299_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067_22098311_22098422_22098620_22098947_22099057_22099283_22099361_22099703_22099894_22100593_22100740_22100843_22100973_22101439_22101531_22101707_22101852_22102174_22102316_22102527_22102629_22102792
transcript_172436.known	chr8	+	917	3	FSM	ENSG00000158863.22	ENST00000498344.2	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTCTCTTAAAAAAAGG	5	True	NA	NA	False	NA	NA	NA	22089158	22097034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22089299_22094439_22094519_22096336
transcript_172437.known	chr8	-	1513	3	FSM	ENSG00000275074.2	ENST00000611621.2	1513	3	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCTGCCTACAC	-7	True	NA	-14	True	AGTAAA	-14	NA	22109419	22106877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22107896_22108132_22108347_22109138
transcript_172438.known	chr8	-	1754	2	FSM	ENSG00000275074.2	ENST00000613958.1	1754	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTGCCTACACGTCT	-7	True	NA	-10	True	AGTAAA	-18	NA	22109419	22106873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22108347_22109138
transcript_172442.known	chr8	-	1666	8	FSM	ENSG00000168476.12	ENST00000306306.8	1666	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_6	29.732137494637	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-17	True	NA	-19	True	AATAAA	-14	NA	22141907	22138019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_172445.nic	chr8	-	2064	7	NIC	ENSG00000168476.12	novel	1666	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_5	30.7503387515216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-6	True	NA	-19	True	AATAAA	-14	NA	22141951	22138019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_22138553_22138638_22138794_22138925_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_172446.nic	chr8	-	2497	6	NIC	ENSG00000168476.12	novel	1666	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_4	33.2108416033078	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-6	True	NA	-19	True	AATAAA	-14	NA	22141951	22138019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_22138553_22138638_22138794_22138925_22140084_22140171_22140249_22140624_22140698_22141450
transcript_172451.known	chr8	+	3244	20	FSM	ENSG00000168487.20	ENST00000520982.5	3244	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	6.11704851611269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGGCATAAGCCACTTCC	-6	True	NA	NA	False	NA	NA	NA	22165323	22211892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176923_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201802_22201929_22206853_22206982_22207302_22207517_22209444_22209696_22211593
transcript_172453.known	chr8	+	3593	20	FSM	ENSG00000168487.20	ENST00000306385.10	3593	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	3.76232968434979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGCCAGATGCTGT	-13	True	NA	9	True	AATAAA	-20	NA	22165371	22212326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201802_22201929_22206853_22206982_22207302_22207517_22209444_22209696_22211593
transcript_17246.nic	chr1	-	2435	18	NIC	ENSG00000047410.14	novel	2478	18	NA	NA	-68	-1636	combination_of_known_junctions	FALSE	canonical	3	38	junction_17	69.9600973763866	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATGAGCAGCTTGAG	-45	True	NA	NA	False	AAAAAG	-22	NA	186375761	186355506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
transcript_172461.known	chr8	+	2320	17	FSM	ENSG00000168487.20	ENST00000521385.5	2320	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	7.45402575793779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGCCAGGCCTCCC	15	True	NA	NA	False	AAGAAA	-14	NA	22165399	22201200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22199263_22199388_22201117
transcript_172463.known	chr8	+	2506	16	FSM	ENSG00000168487.20	ENST00000306349.13	2506	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	6.90700127889569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGTCCATGTGTCT	-13	True	NA	15	True	AGTAAA	-36	NA	22165371	22201482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201117
transcript_172469.known	chr8	-	3099	6	FSM	ENSG00000168490.14	ENST00000321613.7	3099	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	7.63151361133557	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGCTGCTGTAACAAA	267	False	22232121	-5	True	AATAAA	-36	NA	22232101	22219703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22228787_22228910_22231795
transcript_17247.nic	chr1	-	2506	17	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-135	1636	-135	-1636	5prime_fragment	FALSE	canonical	3	241	junction_11	32.7914218012882	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATGAGCAGCTTGAG	256	False	NA	NA	False	AAAAAG	-22	NA	186375460	186355506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_172470.nnic	chr8	-	2274	6	NNC	ENSG00000168490.14	novel	3099	6	NA	NA	-265	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	5.2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGAGCTGCTGTAAC	2	True	NA	-8	True	AATAAA	-33	NA	22232366	22219706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_22220219_22221183_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
transcript_172471.known	chr8	-	2976	5	FSM	ENSG00000168490.14	ENST00000454243.7	2976	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.58257569495584	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCTGCTGTAACAAAA	269	False	22232121	-4	True	AATAAA	-37	NA	22232099	22219702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
transcript_172472.known	chr8	+	5336	9	FSM	ENSG00000168495.13	ENST00000306433.9	5336	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	68.5810423878203	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCCTGCGTGGTCCGA	-5	True	NA	19	True	ATTAAA	-22	NA	22245132	22254601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22245184_22245444_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
transcript_172475.known	chr8	+	5494	8	FSM	ENSG00000168495.13	ENST00000397802.8	5494	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	16.3569868988198	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCCCTGCGTGGTCCG	97	False	NA	18	True	ATTAAA	-21	NA	22245234	22254600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
transcript_17248.nic	chr1	-	2383	17	NIC	ENSG00000047410.14	novel	2478	18	NA	NA	-68	-1764	combination_of_known_junctions	FALSE	canonical	3	38	junction_16	71.9331286682291	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGATCACACCTTTGTC	-45	True	NA	NA	False	NA	NA	NA	186375761	186355634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
transcript_172489.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000359741.10	4663	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	694.19895383096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	10	True	NA	18	True	AATAAA	-26	NA	22367277	22422736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22409945_22410116_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_172491.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000381237.6	4663	9	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_8	153.775810841628	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	10	True	NA	18	True	AATAAA	-26	NA	22367277	22422736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_172497.known	chr8	+	2137	9	FSM	ENSG00000104635.15	ENST00000289952.9	2137	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	550.613691711349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCCAGCTGGCCAATAG	0	True	NA	NA	False	NA	NA	NA	22367536	22420140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22367738_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_17250.nic	chr1	-	2454	16	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-135	1764	-135	-1764	5prime_fragment	FALSE	canonical	3	241	junction_10	33.8484202815369	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGATCACACCTTTGTC	256	False	NA	NA	False	NA	NA	NA	186375460	186355634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_172509.known	chr8	+	1708	9	FSM	ENSG00000104635.15	ENST00000240095.10	1708	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	561.146134598644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTATTTCCTAACTGCA	19	True	NA	NA	False	ATTAAA	-19	NA	22367286	22434129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22433890
transcript_172513.known	chr8	+	2194	14	FSM	ENSG00000120910.15	ENST00000240139.10	2194	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	8.67697763212528	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTTCTGACTTGAAC	-24	True	NA	11	True	AATAAA	-21	NA	22441077	22541125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22539468_22539499_22540614
transcript_172517.known	chr8	+	2135	13	FSM	ENSG00000120910.15	ENST00000289963.12	2135	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	8.98571397027279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCAGTCTTCATTAT	22	True	NA	28	True	AATAAA	-38	NA	22441123	22541142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22540614
transcript_172519.known	chr8	+	1598	8	FSM	ENSG00000120910.15	ENST00000518852.5	1598	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	5.15078753637713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACGTATGTGTGTTTGT	NA	False	NA	NA	False	AGTAAA	-22	NA	22440818	22522813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654
transcript_172531.known	chr8	+	2028	10	FSM	ENSG00000120896.14	ENST00000523965.5	2028	10	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	74.012177843486	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	3	True	NA	21	True	AATAAA	-16	NA	22565677	22575495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_172535.nnic	chr8	+	2116	10	NNC	ENSG00000120896.14	novel	3067	19	NA	NA	-90	0	intron_retention	FALSE	canonical	3	31	junction_1	205.972550010978	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	149	False	NA	21	True	AATAAA	-16	NA	22565910	22575495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_22566194_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_172537.nic	chr8	+	2157	10	NIC	ENSG00000120896.14	novel	3067	19	NA	NA	-81	0	intron_retention	FALSE	canonical	3	22	junction_1	208.695477835855	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	158	False	NA	21	True	AATAAA	-16	NA	22565919	22575495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22566244_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_172544.nic	chr8	+	1886	9	NIC	ENSG00000120896.14	novel	2028	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	36	junction_1	216.809824500644	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	5	True	NA	21	True	AATAAA	-16	NA	22565679	22575495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22565873_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_172549.nic	chr8	+	2047	8	NIC	ENSG00000120896.14	novel	2028	10	NA	NA	-51	0	intron_retention	FALSE	canonical	3	36	junction_1	228.876671183948	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	354	False	NA	21	True	AATAAA	-16	NA	22565626	22575495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22565873_22566660_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_172557.known	chr8	+	1847	10	FSM	ENSG00000120913.24	ENST00000397760.8	1847	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	127.879283353916	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	0	True	NA	15	True	AATAAA	-1	NA	22579129	22594298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22579528_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_172558.known	chr8	+	1491	10	FSM	ENSG00000120913.24	ENST00000397761.6	1491	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	130.118749182771	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTATAAATATATGAATA	7	False	NA	-18	True	GGGGCT	-35	NA	22579149	22594265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_172559.nic	chr8	+	1769	9	NIC	ENSG00000120913.24	novel	2236	10	NA	NA	-40	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_1	103.04542384308	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	349	False	NA	15	True	AATAAA	-1	NA	22579089	22594298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22579528_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22593732
transcript_17256.nic	chr1	-	1235	6	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-248	8972	120	-8972	5prime_fragment	FALSE	canonical	3	293	junction_2	21.5165052924493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTAAGTTAGTAAAA	143	False	NA	NA	False	AATAAA	-4	NA	186375573	186362842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_172573.known	chr8	+	2056	7	FSM	ENSG00000241852.11	ENST00000289989.10	2056	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	30	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAACCTCAGGTGAAT	2	True	NA	18	True	ATTAAA	-15	NA	22599598	22604142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602536_22602644_22603194
transcript_172574.known	chr8	+	2021	7	FSM	ENSG00000241852.11	ENST00000409586.7	2021	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	30.9551647099837	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	4	True	NA	9	True	ATTAAA	-6	NA	22599600	22604133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602560_22602644_22603194
transcript_172576.known	chr8	+	1955	6	FSM	ENSG00000241852.11	ENST00000614574.4	1955	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	31.1576635837798	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGTGAATAGGAAAGG	4	True	NA	26	True	ATTAAA	-23	NA	22599600	22604150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22603194
transcript_172579.known	chr8	+	599	4	FSM	ENSG00000120913.24	ENST00000614502.4	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_3	32.8734948958377	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACAATGGTGGGCAGT	-18	True	NA	NA	False	NA	NA	NA	22589281	22593974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
transcript_172581.known	chr8	+	701	3	FSM	ENSG00000120913.24	ENST00000443561.3	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	117	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGTGGGAAGGAGAG	-17	True	NA	-88	True	NA	NA	NA	22589282	22594195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22589375_22589595_22589742_22593732
transcript_172597.known	chr8	+	4853	21	FSM	ENSG00000158941.17	ENST00000308511.9	3685	21	-125	-1043	-125	550	multi-exon	FALSE	canonical	3	848	junction_6	83.9858767888983	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGATGGGACAGGTCTC	2823	False	NA	NA	False	NA	NA	NA	22604631	22621514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22604843_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_17260.nic	chr1	-	622	3	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	5	17099	5	2423	5prime_fragment	FALSE	canonical	3	328	junction_1	12	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGATATTTCTTAGAA	396	False	NA	NA	False	AAAACA	-42	NA	186375320	186370969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186371044_186373358_186373464_186374877
transcript_172601.known	chr8	+	3980	21	FSM	ENSG00000158941.17	ENST00000389279.7	3980	21	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	215.011970596988	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTGTCCTCCACA	-14	True	NA	66	True	AATAAA	-18	NA	22605037	22620471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22605419_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_17261.known	chr1	-	515	3	FSM	ENSG00000047410.14	ENST00000451586.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAAGCTTGCGGCTTGA	23	True	NA	NA	False	AATGAA	-10	NA	186375693	186373392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_186373464_186374877_186375187_186375558
transcript_17262.nic	chr1	-	872	2	ISM	ENSG00000047410.14	ENST00000451586.1	515	3	15	0	15	0	intron_retention	FALSE	canonical	3	352	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAAGCTTGCGGCTTGA	38	True	NA	NA	False	AATGAA	-10	NA	186375678	186373392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186373464_186374877
transcript_17264.known	chr1	+	3820	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	42.6571580874145	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	-30	True	NA	NA	False	AATAAA	-20	NA	186375837	186421375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_172645.known	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_6	14.8492424049175	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-7	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
transcript_172652.known	chr8	-	893	8	FSM	ENSG00000147439.14	ENST00000519335.5	893	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	64.0955918761906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAGGAGCCCTAGGCAG	35	False	NA	NA	False	AATGAA	-19	NA	22669079	22621269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22669043
transcript_172660.known	chr8	-	1431	7	FSM	ENSG00000147439.14	ENST00000519513.5	1431	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.4662188085371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	1	True	NA	17	True	AGTAAA	-19	NA	22669113	22620711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22644754_22644804_22669043
transcript_172665.known	chr8	-	470	3	FSM	ENSG00000147439.14	ENST00000518366.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGAAGAGCAGACCC	23	True	NA	NA	False	NA	NA	NA	22669091	22636589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22636963_22644754_22644804_22669043
transcript_172666.known	chr8	-	321	2	FSM	ENSG00000147439.14	ENST00000522268.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGTCCTGGGACACT	NA	False	NA	NA	False	NA	NA	NA	22669148	22644587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22644804_22669043
transcript_172669.known	chr8	+	5482	10	FSM	ENSG00000008853.18	ENST00000251822.7	5482	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	6.54896090146283	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCCTTGTTTGTATT	-5	True	NA	31	True	CATAAA	-23	NA	22999547	23020199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23000106_23004424_23004627_23005371_23005476_23005959_23006146_23006727_23007747_23007992_23008112_23010537_23010689_23014689_23014779_23015637_23015744_23017251
transcript_172671.known	chr8	-	1723	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	53.9851374151108	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGACTTCACTTGATAC	6	True	NA	-16	True	NA	NA	NA	23069021	23022310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_172673.known	chr8	-	1464	9	FSM	ENSG00000120889.13	ENST00000523504.5	1464	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	102.465542988851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGATAATAAGGACACT	-4	True	NA	-37	True	NA	NA	NA	23069031	23022473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23068750
transcript_172674.known	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	27.6043474836845	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-4	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_172678.known	chr8	-	1945	2	FSM	ENSG00000245025.3	ENST00000502083.2	1945	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTTCCTCTCTATTT	-4	True	NA	NA	False	NA	NA	NA	23019335	23006380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23008118_23019127
transcript_172680.known	chr8	+	1395	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGTGTGTTGGTTTTT	-1	True	NA	NA	False	NA	NA	NA	23102920	23117445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
transcript_172681.known	chr8	+	1242	4	FSM	ENSG00000284948.1	ENST00000397703.6	1242	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCCTTGGAGATCGGT	6329	False	NA	13	True	AATAAA	-27	NA	23084354	23103558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23102696
transcript_172683.known	chr8	-	3535	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	16.3152535990097	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGTTCGTTTATTT	1	True	NA	NA	False	AATAAA	-22	NA	23164027	23135587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
transcript_172687.known	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.36597393430856	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	3	True	NA	NA	False	NA	NA	NA	23225102	23190451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
transcript_17269.known	chr1	+	3754	13	FSM	ENSG00000157181.16	ENST00000367470.8	3754	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	57.1005448504848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAATTTTTAAATAAGG	-30	True	NA	NA	False	AATAAA	-23	NA	186375837	186421378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_172696.known	chr8	+	1970	3	FSM	ENSG00000246582.3	ENST00000500853.1	1970	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCATTTGGTTCTT	4	True	NA	23	True	AATAAA	-34	NA	23225220	23230926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23226124_23228065_23228154_23229947
transcript_172698.known	chr8	+	632	2	FSM	ENSG00000246582.3	ENST00000522600.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGAAATGGAGTGAGACA	417	False	NA	NA	False	AATAAA	-43	NA	23225633	23228207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23226124_23228065
transcript_172703.known	chr8	+	2639	10	FSM	ENSG00000147457.14	ENST00000517325.5	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	96.5617566094682	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	-3	True	NA	10	True	ATTAAA	-11	NA	23246641	23261992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23246825_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_172707.known	chr8	+	1489	9	FSM	ENSG00000104679.12	ENST00000625275.3	1489	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	97.986526497269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGTCCCGACGTAGCT	NA	False	NA	NA	False	NA	NA	NA	23287907	23296121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23289926_23290051_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_17271.nic	chr1	+	1531	11	ISM	ENSG00000157181.16	ENST00000287859.11	3820	14	-376	22332	-376	-12850	5prime_fragment	FALSE	canonical	3	118	junction_5	14.6982992213385	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAGTATAAAATAAGT	168	False	NA	NA	False	AATGAA	-16	NA	186375461	186399043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953
transcript_172710.known	chr8	+	1573	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	42.3421438150827	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	4	True	NA	16	True	AATAAA	-23	NA	23288107	23296279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_172714.nic	chr8	+	2710	7	ISM	ENSG00000104679.12	ENST00000265806.12	1573	8	-35	0	-35	0	intron_retention	FALSE	canonical	3	176	junction_1	44.8763733927875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	NA	False	NA	16	True	AATAAA	-23	NA	23288072	23296279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768
transcript_172718.nic	chr8	+	2238	5	ISM	ENSG00000104679.12	ENST00000411463.2	1467	9	144	3478	-35	-730	internal_fragment	FALSE	canonical	3	176	junction_1	52.2846774877688	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTCCACGTGGCCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	23288072	23292643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360
transcript_172726.nic	chr8	-	3656	15	NIC	ENSG00000134013.16	novel	3721	14	NA	NA	8	-283	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	73.7562173097071	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGTGTTTCCTTTGA	NA	False	NA	-2	True	AATAAA	-17	NA	23404218	23297179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23370642_23370763_23403953
transcript_172729.known	chr8	-	3721	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_7	12.4933118201975	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGCATAGGAGTTGT	0	True	NA	NA	False	NA	NA	NA	23404120	23296896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_17273.known	chr1	+	522	1	FSM	ENSG00000231767.4	ENST00000647225.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATGACTTAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	192716131	192716653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_192716100_192716700
transcript_172732.nic	chr8	-	3510	14	NIC	ENSG00000134013.16	novel	3721	14	NA	NA	-45	-283	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	56.0144740381908	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGTGTTTCCTTTGA	NA	False	NA	-2	True	AATAAA	-17	NA	23404171	23297179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328587_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_172735.nnic	chr8	-	3347	13	NIC	ENSG00000134013.16	novel	3721	14	NA	NA	-15	-283	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	53.9240721343961	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGTGTTTCCTTTGA	NA	False	NA	-2	True	AATAAA	-17	NA	23404141	23297179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_23298123_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_17274.known	chr1	+	1348	5	FSM	ENSG00000116741.8	ENST00000235382.7	1348	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	4.33012701892219	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGAGTCTAGATGTGA	-2	True	NA	15	True	AATAAA	-25	NA	192809038	192812275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_192809182_192810165_192810268_192810369_192810432_192810980_192811148_192811401
transcript_172746.known	chr8	-	5803	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	47.810098886695	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGTAGACTGTGTGGG	-3	True	NA	-34	True	AATAAA	-20	NA	23457647	23429161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_172748.known	chr8	-	2063	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	37.9058592656421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCACAGCTCCACGA	4	True	NA	NA	False	NA	NA	NA	23457695	23432925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_172758.known	chr8	-	2026	12	FSM	ENSG00000197217.13	ENST00000523958.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	49.8525097389563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTTGGTTATTCTC	5	True	NA	NA	False	AATACA	-20	NA	23457639	23434092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_172762.known	chr8	-	2097	13	FSM	ENSG00000197217.13	ENST00000356206.10	2097	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.2436171401164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCTATTTTATTCTAC	4	True	NA	NA	False	AATAAA	-19	NA	23457695	23385782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23386046_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_172765.known	chr8	+	735	4	FSM	ENSG00000147454.14	ENST00000417331.6	735	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.5038719630109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCCAGTCCATCCAC	-16	True	NA	NA	False	NA	NA	NA	23528955	23571463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107_23566337_23568258_23568379_23571334
transcript_172766.known	chr8	+	4672	4	FSM	ENSG00000147454.14	ENST00000519973.6	4672	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	69.1391511534689	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	-16	True	NA	22	True	AATAAA	-16	NA	23528955	23575463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334
transcript_172770.known	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	78.2574100147853	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
transcript_172773.nic	chr8	+	2127	4	NIC	ENSG00000147454.14	novel	3404	3	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.2279333450548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-9	True	NA	NA	False	AGTAAA	-16	NA	23528862	23572221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_23529213_23566107_23566941_23568321_23568379_23571334
transcript_172779.known	chr8	+	3404	3	FSM	ENSG00000147454.14	ENST00000518881.5	3404	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	65	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-5	True	NA	NA	False	AGTAAA	-16	NA	23528966	23572221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107_23568379_23571334
transcript_172781.known	chr8	+	3018	2	FSM	ENSG00000147454.14	ENST00000520654.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTAATTCTGGC	-1	True	NA	NA	False	NA	NA	NA	23529052	23568965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107
transcript_172784.known	chr8	+	479	2	FSM	ENSG00000147454.14	ENST00000519192.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTAGTGAGAGTGTAA	3	True	NA	NA	False	AATAAA	-16	NA	23528974	23531925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23531684
transcript_172785.known	chr8	-	3278	2	FSM	ENSG00000167034.10	ENST00000380871.5	3278	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGTGTGTGATTTTC	2	True	NA	-3	True	AATAAA	-21	NA	23682938	23678696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23681640_23682603
transcript_172786.known	chr8	-	1775	2	FSM	ENSG00000180053.8	ENST00000325017.4	1775	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATGTGGTTGCGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	23706756	23701739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23703083_23706324
transcript_172787.known	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_2	21.9241115365405	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	1	True	NA	-23	True	AATAAA	-14	NA	23854806	23841928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
transcript_172789.known	chr8	+	3271	3	FSM	ENSG00000104722.14	ENST00000221166.10	3271	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	5.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	0	True	NA	12	True	AATAAA	-19	NA	24913760	24919093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_24914874_24915604_24915730_24917060
transcript_172798.known	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	7.31816613336672	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-1	True	NA	0	True	AATAAA	-18	NA	24956612	24950954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
transcript_172803.known	chr8	-	3367	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_11	10.2908127203968	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-11	True	NA	-4	True	ATTAAA	-20	NA	25458433	25427846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
transcript_172808.known	chr8	+	3486	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	16.8457891547086	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAACATTCTATTAA	-14	True	NA	25	True	AATAAA	-20	NA	25459232	25507911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_172814.nic	chr8	+	2175	14	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-236	4512	-202	-4474	5prime_fragment	FALSE	canonical	3	220	junction_2	17.4240532923914	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGGAAAGAAAAGTGT	-4	True	NA	NA	False	AAAAAG	-17	NA	25458996	25503399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372
transcript_172815.known	chr8	+	3565	14	FSM	ENSG00000184661.14	ENST00000380665.3	3565	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_8	14.8459545622336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	-4	True	NA	-13	True	AATAAA	-23	NA	25459198	25507873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_172817.nic	chr8	+	1879	13	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-29	19284	5	2792	5prime_fragment	FALSE	canonical	3	220	junction_2	17.5900461119982	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAGGAGGAAGTCTCAA	1	True	NA	NA	False	AATACA	-29	NA	25459203	25488627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551
transcript_172818.nic	chr8	+	2208	13	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-294	19220	-260	2856	5prime_fragment	TRUE	canonical	3	220	junction_2	17.5900461119982	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATGTGTTTAAAGATAT	NA	False	NA	NA	False	AAGAAA	-41	NA	25458938	25488691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551
transcript_17282.known	chr1	-	1346	12	FSM	ENSG00000116750.14	ENST00000367451.8	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	183.0230080826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATGAAAGTGATATTAA	15	True	NA	-21	True	CATAAA	-38	NA	193059349	193016161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_172822.known	chr8	+	3923	10	FSM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	36.9126429543665	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTGTCAAGTTGCT	-13	True	NA	13	True	AATAAA	-19	NA	26291507	26372680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
transcript_172826.known	chr8	+	3452	6	FSM	ENSG00000104765.16	ENST00000380629.7	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_1	41.0297453075205	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCAGTATATCATTT	-17	True	NA	24	True	ATTAAA	-16	NA	26383053	26413127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_172831.known	chr8	+	4603	14	FSM	ENSG00000092964.18	ENST00000311151.9	4603	14	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_5	63.1379629609944	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTGTATTGAGATGT	365	False	NA	21	True	AATAAA	-23	NA	26577842	26658178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26578294_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
transcript_172837.known	chr8	-	4730	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTTTTTCTGTTTCC	1	True	NA	-21	True	AATAAA	-16	NA	26513872	26504700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_26509244_26509547_26509678_26513815
transcript_172840.known	chr8	-	3770	3	FSM	ENSG00000120907.18	ENST00000380573.4	3770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTGTATCTCTTTTC	-3	True	NA	NA	False	NA	NA	NA	26867278	26768808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_26770667_26864086_26865656_26866935
transcript_172842.known	chr8	-	4183	6	FSM	ENSG00000104228.13	ENST00000305364.9	4183	6	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_3	5.63560112144215	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCCAATTTTTATTTA	-16	True	NA	-15	True	ACTAAA	-15	NA	27311272	27284885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27288128_27289161_27289281_27290155_27290179_27294079_27294311_27298463_27298560_27310800
transcript_172844.known	chr8	-	423	3	FSM	ENSG00000104228.13	ENST00000519219.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	6.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGGACCAGCTGGGAG	400	False	NA	NA	False	NA	NA	NA	27310856	27294039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27294311_27298463_27298560_27310800
transcript_172846.known	chr8	+	4719	36	FSM	ENSG00000120899.18	ENST00000397501.5	4719	36	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.19214477330311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTTGTTTTGTTTGTTTG	-6	True	NA	27	True	ATTAAA	-19	NA	27311481	27459390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27311710_27312303_27312388_27313204_27313288_27322401_27322500_27323266_27323427_27325563_27325682_27397547_27397789_27419894_27420074_27420656_27420745_27422303_27422384_27430092_27430156_27430363_27430419_27430875_27431017_27431397_27431473_27432259_27432362_27433434_27433553_27434092_27434133_27434512_27434560_27435742_27435794_27436250_27436349_27437121_27437207_27437395_27437497_27437764_27437881_27439030_27439132_27439308_27439399_27440236_27440442_27442874_27442984_27444205_27444272_27445793_27445920_27450748_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
transcript_172850.known	chr8	+	4074	31	FSM	ENSG00000120899.18	ENST00000346049.10	4074	31	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_21	4.15478305356877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGGTTTGTTTTGTTTG	8	True	NA	23	True	ATTAAA	-15	NA	27325551	27459386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27325682_27397547_27397789_27419894_27420074_27420656_27420745_27422303_27422384_27430092_27430156_27430363_27430419_27430875_27431017_27431397_27431473_27432259_27432362_27433434_27433553_27434092_27434133_27434512_27434560_27435742_27435794_27436250_27436349_27437121_27437207_27437395_27437497_27437764_27437881_27439030_27439132_27439308_27439399_27440236_27440442_27442874_27442984_27444205_27444272_27445793_27445920_27450748_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
transcript_172852.known	chr8	+	2776	19	FSM	ENSG00000120915.14	ENST00000521400.6	2776	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	9.15841379333106	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAGCACACTTGCA	-25	True	NA	NA	False	NA	NA	NA	27491142	27545564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
transcript_172858.nic	chr8	+	1024	6	ISM	ENSG00000120915.14	ENST00000520623.5	1923	14	-15	27155	-15	0	5prime_fragment	FALSE	canonical	3	52	junction_5	11.0562199688682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	-4	True	NA	NA	False	NA	NA	NA	27491109	27512100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835
transcript_17287.known	chr1	-	1355	12	FSM	ENSG00000116750.14	ENST00000367450.7	1355	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	190.002087852817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTTAGTTTTCTGGT	782	False	NA	38	True	NA	NA	NA	193059296	193016102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_172871.known	chr8	-	2098	9	FSM	ENSG00000120885.22	ENST00000405140.7	2098	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	646.110478169175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTTCAAGAATTGCT	3269	False	NA	-86	True	AATAAA	-36	NA	27611431	27597807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611145
transcript_172872.nic	chr8	-	1923	9	NIC	ENSG00000120885.22	novel	2749	9	NA	NA	67	0	intron_retention	FALSE	canonical	3	48	junction_8	634.707806789865	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	2801	False	NA	-28	True	AATAAA	-18	NA	27611899	27597995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611600
transcript_172874.known	chr8	-	2749	9	FSM	ENSG00000120885.22	ENST00000316403.15	2749	9	0	0	0	0	multi-exon	TRUE	canonical	3	1514	junction_4	184.220613328151	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTCCACTGTTA	0	True	NA	NA	False	NA	NA	NA	27614700	27596916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_172887.known	chr8	-	2807	8	FSM	ENSG00000120885.22	ENST00000522299.5	2807	8	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_3	195.744523211626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	7	True	NA	-28	True	AATAAA	-18	NA	27614693	27597995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27598251_27598459_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_17289.known	chr1	-	5184	11	FSM	ENSG00000116750.14	ENST00000367454.6	5184	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	77.1484931803597	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTCTCATGTAGGTGTA	4	True	NA	NA	False	AATAAA	-17	NA	193059360	193012253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_172892.known	chr8	-	303	3	FSM	ENSG00000120885.22	ENST00000519472.5	303	3	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_2	97	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGGAGCCGCTACCGC	19	False	NA	17	True	AAGAAA	-5	NA	27614681	27608936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27609087_27610474_27610601_27614654
transcript_172901.known	chr8	+	3787	6	FSM	ENSG00000168077.14	ENST00000301904.4	3787	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	6.27375485654325	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCTTTGAGTCCT	-21	True	NA	14	True	AGTAAA	-16	NA	27633901	27673018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27670899
transcript_172902.known	chr8	+	1910	6	FSM	ENSG00000168077.14	ENST00000337221.8	1910	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	21.0371100676875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTTTATTTTACTA	-3	True	NA	15	True	AATAAA	-27	NA	27633867	27676776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27676568
transcript_172904.nic	chr8	+	2040	5	ISM	ENSG00000168077.14	ENST00000301904.4	3787	6	-34	13141	0	-13141	5prime_fragment	FALSE	canonical	3	57	junction_2	4.76969600708473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAGAAAAGAA	-3	True	NA	NA	False	NA	NA	NA	27633867	27659877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495
transcript_172905.nnic	chr8	+	2773	5	NIC	ENSG00000168077.14	novel	3787	6	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	26.5094322836231	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTGAGGTGTCTTTGAG	-3	True	NA	10	True	AGTAAA	-12	NA	27633867	27673014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27670899
transcript_172908.known	chr8	+	3754	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	29.446391969136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGCTTCCCTTAATC	7	True	NA	NA	False	NA	NA	NA	27774553	27805316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
transcript_17291.known	chr1	-	5327	11	FSM	ENSG00000116750.14	ENST00000367455.8	5327	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	102.649111053141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATGTAGGTGTATTTT	-2	True	NA	NA	False	AATAAA	-21	NA	193059496	193012249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_172915.known	chr8	-	3627	9	FSM	ENSG00000147419.19	ENST00000356537.9	3627	9	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_6	38.9228001947445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTGTGAGAGAGATT	-20	True	NA	-11	True	AATAAA	-21	NA	27772640	27733315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_172917.known	chr8	-	3586	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	123.601235050959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTGTGAGAGAGA	-33	True	NA	-13	True	AATAAA	-19	NA	27772653	27733317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_172919.known	chr8	-	1836	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	14.8516473352766	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTCTCAGCATTATT	-14	True	NA	-24	True	AATAAA	-44	NA	27837817	27809623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
transcript_172924.known	chr8	-	1734	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	186.390867682823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTGATATATGAATTC	-19	True	NA	-15	True	AATAAA	-23	NA	27772639	27735051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_172926.nic	chr8	-	668	7	ISM	ENSG00000147419.19	ENST00000356537.9	3627	9	-12	14756	1	0	5prime_fragment	FALSE	canonical	3	411	junction_4	42.2282159488442	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	-32	True	NA	NA	False	AAAAAG	-43	NA	27772652	27748071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_172928.nic	chr8	-	599	7	ISM	ENSG00000147419.19	ENST00000356537.9	3627	9	-12	14825	1	-69	5prime_fragment	FALSE	canonical	3	411	junction_4	42.2282159488442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAGGAAATGAAAAAGAGA	-32	True	NA	46	True	AAAAAG	-7	NA	27772652	27748140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_172931.nic	chr8	-	476	5	ISM	ENSG00000147419.19	ENST00000520202.5	1734	7	-13	13056	1	-36	5prime_fragment	FALSE	canonical	3	35	junction_1	213.008655927406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAGAAGAGGGAAATG	-32	True	NA	79	True	AAAAAG	-40	NA	27772652	27748107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_172932.nic	chr8	+	500	3	ISM	ENSG00000171320.15	ENST00000305188.13	3754	11	-31	28609	-31	0	5prime_fragment	FALSE	canonical	3	269	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAACAACAAAAAACC	0	True	NA	NA	False	NA	NA	NA	27774522	27776707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27774608_27775498_27775568_27776361
transcript_172936.known	chr8	-	1945	7	FSM	ENSG00000168079.17	ENST00000524352.5	1945	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTACCTGTTTGTGATT	204	False	NA	NA	False	NA	NA	NA	27992624	27904368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27904835_27907147_27907247_27909662_27909744_27921570_27922246_27966413_27966543_27987503_27987631_27992256
transcript_172939.known	chr8	+	3148	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	19.6418181543401	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCATGTGGTTTTCT	-13	True	NA	17	True	AATAAA	-19	NA	28093138	28191153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_172942.known	chr8	+	2059	14	FSM	ENSG00000134014.17	ENST00000518112.5	2059	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.6609114774245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAGGAAAATGAGCTTT	-13	True	NA	NA	False	NA	NA	NA	28093138	28190203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28097218_28097319_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_172943.known	chr8	+	1914	14	FSM	ENSG00000134014.17	ENST00000524103.5	1914	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	49.2925093628833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCAGGTGGCCTATT	2880	False	NA	-92	True	NA	NA	NA	28093111	28189992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_172945.known	chr8	+	1924	13	FSM	ENSG00000134014.17	ENST00000519261.5	1924	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	66.8098462470582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGAGTAGTTTATT	-12	True	NA	10	True	AATAAA	-22	NA	28093139	28190094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_172948.nnic	chr8	-	2339	11	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	-51	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	33.6992581520721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	61	True	NA	NA	NA	28386189	28348286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28375261_28375383_28386003
transcript_172949.nnic	chr8	-	2181	10	FSM	ENSG00000186918.14	ENST00000523095.5	1790	10	-119	-272	-54	-9	multi-exon	FALSE	canonical	3	35	junction_9	18.0233045297703	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	669	False	NA	61	True	NA	NA	NA	28386192	28348286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386003
transcript_172950.nnic	chr8	-	2050	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	-4	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	27.9642629082191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-4	True	NA	61	True	NA	NA	NA	28386450	28348286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386392
transcript_172951.nnic	chr8	-	2218	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	-51	-9	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	19.9226900856012	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	61	True	NA	NA	NA	28386189	28348286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386003
transcript_172955.nnic	chr8	-	1903	9	NIC	ENSG00000186918.14	novel	1790	10	NA	NA	-34	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	29.5653407726006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-4	True	NA	61	True	NA	NA	NA	28386172	28348286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28386003
transcript_172956.known	chr8	-	1254	9	FSM	ENSG00000214050.8	ENST00000380254.7	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.9285218253543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	15	True	NA	-49	True	AGTAAA	-16	NA	28490229	28428411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_172958.known	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	23.259406699226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	4774	False	NA	-85	True	NA	NA	NA	28490278	28428447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
transcript_172967.nnic	chr8	-	2313	11	NIC	ENSG00000186918.14	novel	1790	10	NA	NA	-38	18	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	34.078732370791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCTGGCTGATGGGTG	-8	True	NA	88	True	NA	NA	NA	28386176	28348259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28375261_28375383_28386003
transcript_17297.known	chr1	-	1507	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	144.731648232168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	669	False	NA	NA	False	AATAAA	-20	NA	193059409	193018404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_172973.known	chr8	-	1790	10	FSM	ENSG00000186918.14	ENST00000523095.5	1790	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	18.0233045297703	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCGAACATTTTATTTT	788	False	NA	-11	True	NA	NA	NA	28386073	28348558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386003
transcript_172976.known	chr8	-	4797	10	FSM	ENSG00000186918.14	ENST00000344423.10	4797	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	26.4929527084068	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGCCTGTCCTT	-14	True	NA	-3	True	AATAAA	-17	NA	28386460	28345589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386392
transcript_172981.nic	chr8	-	1967	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	19.9226900856012	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAAAATATTTTTCCC	-12	True	NA	19	True	TTTAAA	-6	NA	28386180	28348528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386003
transcript_172984.known	chr8	+	13770	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	41.8495848856597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	-16	True	NA	12	True	AATAAA	-15	NA	28494211	28574258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_172986.known	chr8	+	13740	7	FSM	ENSG00000104290.11	ENST00000537916.2	13740	7	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_5	47.5444236711543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTACCTGATTAATTAT	-23	True	NA	21	True	AATAAA	-24	NA	28494204	28574267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_172989.nic	chr8	+	1637	5	ISM	ENSG00000104290.11	ENST00000240093.8	13770	8	-48	46431	-41	24708	5prime_fragment	FALSE	canonical	3	107	junction_1	26.9014404818775	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTGGCGTGTGTTTTG	168	False	NA	14	True	AATAAA	-15	NA	28494163	28527827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146
transcript_172990.nic	chr8	+	1701	4	ISM	ENSG00000104290.11	ENST00000537916.2	13740	7	-151	46440	-151	24708	5prime_fragment	FALSE	canonical	3	66	junction_1	47.5184174820669	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTGGCGTGTGTTTTG	58	False	NA	14	True	AATAAA	-15	NA	28494053	28527827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146
transcript_173007.nic	chr8	+	3783	7	NIC	ENSG00000012232.9	novel	1779	7	NA	NA	-25	119	combination_of_known_junctions	TRUE	canonical	3	93	junction_1	84.3315217196723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGTTTCAGATTTGCC	NA	False	NA	NA	False	TTTAAA	-3	NA	28622703	28751213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28622811_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_173008.nic	chr8	+	6257	7	NIC	ENSG00000012232.9	novel	1779	7	NA	NA	-25	855	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	84.3315217196723	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTGGAGGTCTTTTGT	NA	False	NA	23	True	AATAAA	-24	NA	28622703	28753687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28622811_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_17301.nic	chr1	+	2042	10	NIC	ENSG00000116747.13	novel	8291	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	39.0842710935433	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	0	True	NA	NA	False	AATGAA	-44	NA	193059573	193084866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_193059777_193069033_193069635_193070553_193070620_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_173011.known	chr8	+	8221	7	FSM	ENSG00000012232.9	ENST00000220562.9	8221	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	73.5196496787688	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAC	-4	True	NA	NA	False	AATACA	-5	NA	28701500	28755599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28701660_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_173018.nnic	chr8	+	6216	6	NIC	ENSG00000012232.9	novel	8221	7	NA	NA	-1	855	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	120.134258228034	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTGGAGGTCTTTTGT	-5	True	NA	23	True	AATAAA	-24	NA	28701499	28753687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28701660_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_173021.nnic	chr8	+	3593	5	NIC	ENSG00000012232.9	novel	8221	7	NA	NA	-1	855	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	136.206415047163	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTGGAGGTCTTTTGT	-5	True	NA	23	True	AATAAA	-24	NA	28701499	28753687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28701660_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_173025.known	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_7	23.7841859225831	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-20	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_173033.known	chr8	-	2759	16	FSM	ENSG00000104299.15	ENST00000416984.6	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	47.421514104887	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	NA	False	NA	-5	True	AATAAA	-18	NA	28890242	28767660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28850212_28850274_28859435_28859564_28889873
transcript_173037.nic	chr8	-	2423	16	NIC	ENSG00000104299.15	novel	2549	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	49.9491296776586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-29	True	NA	-5	True	AATAAA	-18	NA	28889978	28767660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_17305.nic	chr1	+	2427	10	NIC	ENSG00000116747.13	novel	1898	10	NA	NA	18	0	intron_retention	FALSE	canonical	2	6	junction_1	36.9206690414615	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	18	False	NA	NA	False	AATGAA	-44	NA	193059471	193084866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_193059777_193059873_193060223_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_173056.known	chr8	+	3711	10	FSM	ENSG00000147421.18	ENST00000287701.15	3711	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	5.20920363099157	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAAGTGAAGTGGAGC	0	True	NA	NA	False	AATATA	-22	NA	28890394	29053262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29051017
transcript_173075.known	chr8	-	5553	4	FSM	ENSG00000120875.9	ENST00000240100.7	5553	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	14.1656862405839	526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTTGGTTAGACCT	-6	True	NA	-27	True	AATAAA	-15	NA	29350684	29333063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_29337412_29338281_29338502_29340097_29340244_29349845
transcript_173088.known	chr8	-	751	1	FSM	ENSG00000260253.1	ENST00000567818.1	751	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCCGTGCAGTGCCATC	NA	False	NA	NA	False	AATAAA	-23	NA	29353170	29352419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_29352400_29353200
transcript_17309.known	chr1	+	8291	9	FSM	ENSG00000116747.13	ENST00000400968.7	8291	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	17.4243902332334	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	-18	True	NA	NA	False	NA	NA	NA	193059611	193091219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_173091.known	chr8	-	1981	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	394.550072867817	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTCATTCTTTCTA	206	False	NA	-11	True	AATAAA	-13	NA	30083124	30063097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
transcript_173094.known	chr8	-	1741	6	FSM	ENSG00000133872.14	ENST00000521265.5	1741	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	297.31760795486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATCAATAAAAACA	382	False	NA	-39	True	NA	NA	NA	30082948	30063125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30063914_30066027_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
transcript_173095.known	chr8	-	1803	5	FSM	ENSG00000133872.14	ENST00000520303.5	1803	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_4	315.488113880698	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAGAATCAATAAA	177	False	NA	-43	True	NA	NA	NA	30083153	30063129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
transcript_17310.known	chr1	+	3081	9	FSM	ENSG00000116747.13	ENST00000367446.7	3081	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	30.7812341370518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTTGCTCATAATTTT	337	False	NA	9	True	ATTAAA	-20	NA	193060033	193085985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193060223_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_173102.known	chr8	+	1054	7	FSM	ENSG00000104671.8	ENST00000221114.8	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	21.9012937213003	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTGGATTTGTAGC	-3	True	NA	8	True	ATTAAA	-19	NA	30156368	30183639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_173106.known	chr8	+	3163	4	FSM	ENSG00000104660.19	ENST00000321250.13	3163	4	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	46.6499970227461	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTCGTGTCCCAA	-43	True	NA	NA	False	NA	NA	NA	30095407	30108524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30105745
transcript_173108.known	chr8	+	1389	4	FSM	ENSG00000104660.19	ENST00000523116.5	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	368.372094491426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCATATCTTTTCCAGA	29	True	NA	NA	False	NA	NA	NA	30095479	30138348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30137271
transcript_173110.known	chr8	-	403	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGCGTCATTATGCCCT	1877	False	NA	-2	True	AATAAA	-19	NA	30156232	30155829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30155800_30156200
transcript_173111.known	chr8	+	1646	1	FSM	ENSG00000127589.4	ENST00000518096.1	1646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTGGAAAAAAAAAAAAAAAA	14	False	NA	82	True	AATAAA	-11	NA	30351872	30353518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30351900_30353500
transcript_173123.known	chr8	+	2874	9	FSM	ENSG00000157110.16	ENST00000397323.9	2874	9	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_8	368.9835489219	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	0	True	NA	25	True	AATAAA	-20	NA	30384540	30572256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_173124.known	chr8	+	2974	10	FSM	ENSG00000157110.16	ENST00000287771.9	2974	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	561.088426384133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	0	True	NA	25	True	AATAAA	-20	NA	30384526	30572256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30549499_30549586_30558886_30558957_30566256_30566361_30570636
transcript_173125.known	chr8	+	1341	7	FSM	ENSG00000157110.16	ENST00000339877.8	1341	7	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_6	251.448912416728	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	87	False	NA	17	True	AATAAA	-28	NA	30384510	30547522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_173126.known	chr8	+	842	7	FSM	ENSG00000157110.16	ENST00000520161.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	526.65981008195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTCAATAAAAATTTTAA	300	False	NA	-22	True	NA	NA	NA	30385202	30547483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_173127.known	chr8	-	754	3	FSM	ENSG00000254109.6	ENST00000523643.5	754	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCCAGGACTTTGTCC	622	False	NA	NA	False	AATAAA	-24	NA	30384740	30382123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30382616_30383127_30383363_30384713
transcript_173128.known	chr8	-	1747	8	FSM	ENSG00000197265.9	ENST00000355904.9	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_2	29.352189363115	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATGTTTTCTTTTAA	-19	True	NA	0	True	AATAAA	-17	NA	30658236	30578317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
transcript_173134.known	chr8	-	3034	13	FSM	ENSG00000104687.14	ENST00000221130.11	3034	13	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_11	47.0805308900493	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTGTTACTGTGAGC	-23	True	NA	-23	True	AATAAA	-21	NA	30727846	30678065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30679670_30680903_30681038_30681929_30682062_30684087_30684200_30689160_30689320_30692968_30693056_30696379_30696480_30700080_30700136_30703092_30703241_30708071_30708142_30709813_30709903_30712061_30712089_30727529
transcript_173139.known	chr8	+	1451	8	FSM	ENSG00000104691.16	ENST00000265616.10	1451	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	8.63311138842179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	-8	True	NA	27	True	AATAAA	-38	NA	30744163	30767006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_173142.known	chr8	+	1624	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.2418631157217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	2	True	NA	27	True	AATAAA	-38	NA	30744173	30767006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_173146.known	chr8	-	1946	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	22.3215142855497	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTATTGTGTTGTG	-13	True	NA	-10	True	AATAAA	-21	NA	30812818	30785615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
transcript_17315.known	chr1	+	7848	8	FSM	ENSG00000116747.13	ENST00000432079.5	7848	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	30.3711732283313	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	0	True	NA	NA	False	NA	NA	NA	193059453	193091219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_173152.known	chr8	-	2218	2	FSM	ENSG00000172733.12	ENST00000523392.2	2218	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTATACTTTATGCTTC	-27	True	NA	NA	False	AATATA	-13	NA	31033356	31030849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_31032789_31033077
transcript_173153.known	chr8	+	7575	35	FSM	ENSG00000165392.11	ENST00000298139.7	7575	35	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_19	17.6535527267299	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCTTTGACCTTTT	-5	True	NA	23	True	ATTAAA	-27	NA	31033809	31176138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
transcript_173159.known	chr8	+	1769	13	FSM	ENSG00000157168.20	ENST00000521670.5	1769	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	38.6813011099104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGTAACAGCCTCCCT	305	False	NA	NA	False	NA	NA	NA	32548618	32763998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742007_32742076_32754371_32754475_32756402_32756530_32759305_32759437_32760199_32760407_32763217_32763360_32763747
transcript_173162.known	chr8	+	2035	13	FSM	ENSG00000157168.20	ENST00000287842.7	2035	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	38.5216389405574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACACATAGATTCAC	-8	True	NA	NA	False	TATAAA	-5	NA	32548634	32764407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674_32742734_32749560_32749585_32754371_32754475_32756402_32756530_32759305_32759437_32760199_32760407_32763747
transcript_173163.known	chr8	+	2238	13	FSM	ENSG00000157168.20	ENST00000650980.1	2238	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	38.3893612288034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTTTATAAATTAAATA	-9	True	NA	NA	False	AATAGA	-12	NA	32548661	32764519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674_32742734_32754371_32754475_32756402_32756530_32759305_32759437_32760199_32760407_32763217_32763360_32763747
transcript_173165.known	chr8	+	1992	12	FSM	ENSG00000157168.20	ENST00000405005.7	1992	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	37.9305585607077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTTATTTTATTTTA	56	False	NA	NA	False	AATAAA	-18	NA	32548726	32764471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742007_32742076_32754371_32754475_32756402_32756530_32759305_32759437_32760199_32760407_32763747
transcript_173170.known	chr8	+	1703	7	FSM	ENSG00000157168.20	ENST00000650919.1	1703	7	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_6	12.512216252749	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCATTGAGGCATTT	8	False	NA	37	True	AATAAA	-42	NA	32548234	32743253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674
transcript_173172.known	chr8	+	1614	6	FSM	ENSG00000157168.20	ENST00000651807.1	1614	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	11.9599331101808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAGTAAATTGCAT	11	False	NA	NA	False	AGTAAA	-5	NA	32548289	32728623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948
transcript_173174.nic	chr8	+	734	2	ISM	ENSG00000157168.20	ENST00000651175.1	590	5	-483	132109	12	-132096	5prime_fragment	FALSE	canonical	3	107	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATCAAGATACAAAAAAAGC	20	False	NA	NA	False	AATGAA	-27	NA	32548246	32595981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_32548827_32595827
transcript_173175.nic	chr8	+	618	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	24	241	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.030989097709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	3	True	NA	22	True	AATAAA	-19	NA	32927976	33044614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_173179.known	chr8	+	1397	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	33.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	NA	False	NA	NA	False	AGTAAA	-1	NA	32927912	33045445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_33041634_33041772_33044366
transcript_17318.known	chr1	+	1474	7	FSM	ENSG00000116747.13	ENST00000460715.2	1474	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.1927709172242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATTAAATTATGAATGA	-7	True	NA	NA	False	NA	NA	NA	193059622	193085235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_173188.known	chr8	-	3549	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	18.7399973319102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGAGTTGTGTTTTTT	-22	True	NA	NA	False	TATAAA	-2	NA	33473146	33370823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
transcript_173194.known	chr8	-	1623	4	FSM	ENSG00000172728.16	ENST00000520767.5	1623	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	16.062378404209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCTGTTGTTGCCAC	-10	True	NA	NA	False	NA	NA	NA	33473134	33388895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33389799_33453215_33453511_33461371_33461726_33473063
transcript_173195.known	chr8	-	2187	3	FSM	ENSG00000172728.16	ENST00000416169.5	2187	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCCAGTCTTGGGTA	11	True	NA	NA	False	ATTAAA	-15	NA	33473113	33451727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33453511_33461371_33461726_33473063
transcript_173198.known	chr8	+	3561	10	FSM	ENSG00000198042.11	ENST00000360128.11	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	43.1134020009876	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTGACTGGGAGAAAAAA	-4	True	NA	8	True	AATAAA	-18	NA	33485181	33501262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231_33497298_33498431
transcript_173204.known	chr8	-	2516	8	FSM	ENSG00000129696.13	ENST00000613904.1	2516	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	101.210429405315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCTTCCTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	33513185	33498508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33512959
transcript_173205.known	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	73.7405822419904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-12	True	NA	-2	True	AATAAA	-35	NA	33513135	33498721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
transcript_173208.known	chr8	-	2242	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	42.0317340430616	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	14	True	NA	-20	True	AATAAA	-19	NA	33513109	33498953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
transcript_17321.known	chr1	-	682	4	FSM	ENSG00000023572.10	ENST00000367439.8	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	8.33999733546454	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCACTTGCCAATTC	0	True	NA	-25	True	AATAAA	-17	NA	193105414	193096469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105263
transcript_173213.nic	chr8	+	952	6	ISM	ENSG00000198042.11	ENST00000360128.11	3561	10	-488	10931	-488	1040	5prime_fragment	FALSE	canonical	3	268	junction_1	47.6797651000925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGGTAACTTATTGT	NA	False	NA	NA	False	NA	NA	NA	33484693	33490331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284
transcript_173214.known	chr8	-	1588	6	FSM	ENSG00000129696.13	ENST00000520636.5	1588	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	106.437963152251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	411	False	NA	-73	True	NA	NA	NA	33512712	33499117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966
transcript_173218.known	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.05941170815567	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-2	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
transcript_17322.known	chr1	-	417	3	FSM	ENSG00000116750.14	ENST00000483156.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGAAACATTTTAATA	861	False	NA	NA	False	NA	NA	NA	193059217	193049531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193049852_193051753_193051818_193059184
transcript_173220.known	chr8	-	1754	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	11.4309521329882	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	-41	True	NA	-3	True	AATAAA	-16	NA	33600023	33591329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
transcript_173222.known	chr8	+	5387	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.01855201914552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATACGAAGGGCTTT	2	True	NA	NA	False	AATAAA	-25	NA	37736633	37758422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
transcript_173224.known	chr8	+	1466	7	FSM	ENSG00000147475.17	ENST00000648919.1	1466	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.19891591749923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTTTATCTCACTA	2	True	NA	NA	False	AGTAAA	-15	NA	37736633	37746550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37745568
transcript_173225.known	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	64.3466377980883	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	2	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
transcript_173232.known	chr8	+	559	5	FSM	ENSG00000147471.12	ENST00000523994.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	131.609270190211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTAAGTATAGTAAAG	12	False	NA	NA	False	AATAAA	-28	NA	37762654	37766716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766481
transcript_173235.known	chr8	+	770	4	FSM	ENSG00000147471.12	ENST00000520073.5	770	4	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_3	13.8884444373331	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAATTATAGTAAAGTA	-9	True	NA	NA	False	AATAAA	-36	NA	37762594	37766741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279
transcript_173238.known	chr8	+	6944	19	FSM	ENSG00000020181.18	ENST00000412232.3	6944	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	2.330686329267	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTAACCAGGCCAGCTGC	8	True	NA	NA	False	NA	NA	NA	37796882	37844896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37797535_37814895_37814968_37828887_37828960_37829260_37829333_37829487_37829560_37829850_37830015_37830709_37830924_37831422_37831588_37833009_37833209_37833687_37833838_37833966_37834129_37835173_37835399_37835553_37835771_37837730_37837940_37838955_37839084_37839498_37839623_37840120_37840267_37840759_37840850_37841085
transcript_173243.known	chr8	-	2560	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_2	7.40870359029762	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGGGAGATGGGTCTT	3	True	NA	NA	False	NA	NA	NA	37849861	37843267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
transcript_173246.known	chr8	-	6253	5	FSM	ENSG00000156675.16	ENST00000287263.8	6253	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	20.8925824157762	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCCACCCCCACCACAC	24	False	NA	NA	False	NA	NA	NA	37899467	37858617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37863114_37870419_37870529_37874514_37875323_37877108_37877552_37899070
transcript_173248.known	chr8	-	2585	2	FSM	ENSG00000188778.6	ENST00000345060.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGATGCAGTTTTCT	-1	True	NA	0	True	AGTAAA	-20	NA	37966599	37962989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37964240_37965264
transcript_17325.known	chr1	+	592	2	FSM	ENSG00000116747.13	ENST00000469214.2	592	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAACAAATGTCGTGTA	-35	True	NA	NA	False	NA	NA	NA	193059594	193060283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193059873
transcript_173251.known	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	4	2222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	-3	True	NA	22	True	AATAAA	-26	NA	38030533	38060365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38030719_38057080_38057261_38059903
transcript_173256.known	chr8	+	2918	16	FSM	ENSG00000129691.16	ENST00000343823.11	2918	16	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	43.355071470616	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTCACGCCTGTAATC	-3	True	NA	NA	False	ATTAAA	-38	NA	38105528	38140080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_173258.known	chr8	+	2678	16	FSM	ENSG00000129691.16	ENST00000428278.6	2678	16	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	91.1134579643546	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	261	False	NA	21	True	AATAAA	-18	NA	38105792	38139703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_173259.nic	chr8	+	2456	15	NIC	ENSG00000129691.16	novel	2918	16	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	122.914874309542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	-17	True	NA	21	True	AATAAA	-18	NA	38105514	38139703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_17326.known	chr1	+	1791	8	FSM	ENSG00000116747.13	ENST00000367441.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	18.3358687176979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	8874	False	NA	NA	False	AATGAA	-44	NA	193069015	193084866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_173260.known	chr8	+	2433	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	144.642275131104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	26	False	NA	21	True	AATAAA	-18	NA	38105938	38139703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_173267.known	chr8	-	2565	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.44802681092953	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGCGTGGTG	-1	True	NA	NA	False	ACTAAA	-6	NA	38150952	38142699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
transcript_173268.known	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.2091253319111	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	18	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
transcript_17327.known	chr1	+	5869	17	FSM	ENSG00000134371.14	ENST00000367435.5	5869	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_8	36.754623433658	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTCATGCTATGTCG	9	True	NA	31	True	AATAAA	-28	NA	193122030	193254815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193249729_193249872_193250675
transcript_173273.known	chr8	+	1943	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	104.124924969961	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACATTTTTGTACAT	76	False	NA	NA	False	TTTAAA	-12	NA	38176587	38210888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
transcript_173276.known	chr8	-	906	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	20.5101600838869	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	-14	True	NA	-16	True	AATAAA	-16	NA	38176493	38163338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
transcript_173278.known	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	230.752874064201	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-2	True	NA	76	True	AAGAAA	-42	NA	38176730	38163427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
transcript_173281.known	chr8	-	975	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	265.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTATTTCCAAGTTTGA	54	False	NA	-12	True	AATAAA	-20	NA	38176674	38163334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38171964_38172034_38176274
transcript_173282.known	chr8	-	1568	4	FSM	ENSG00000175324.10	ENST00000522515.5	1568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	250.551835399827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATGAATCTCAAAA	12	False	NA	-36	True	NA	NA	NA	38176716	38163358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38175815
transcript_173283.known	chr8	-	3995	10	FSM	ENSG00000147548.17	ENST00000316985.7	3995	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	29.6760284854066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGTGTTGGGTTTTAT	-26	True	NA	1	True	AATAAA	-41	NA	38382272	38316416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
transcript_173286.nic	chr8	-	1730	6	ISM	ENSG00000147548.17	ENST00000316985.7	3995	10	-56	13386	-56	7566	5prime_fragment	FALSE	canonical	3	311	junction_1	14.9398795175865	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGAACAGTATACTTTT	4021	False	NA	NA	False	AAGAAA	-1	NA	38382328	38329802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
transcript_173287.known	chr8	-	577	3	FSM	ENSG00000147548.17	ENST00000534155.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATCCGTCAGGAGGAT	19	True	NA	NA	False	NA	NA	NA	38382227	38348095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38348216_38363872_38363901_38381798
transcript_173289.nic	chr8	-	1172	2	ISM	ENSG00000147548.17	ENST00000316985.7	3995	10	-56	31157	-56	522	5prime_fragment	FALSE	canonical	3	338	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCATGACTCATCA	4021	False	NA	24	True	AAGAAA	-13	NA	38382328	38347573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_38348216_38381798
transcript_173290.known	chr8	+	4682	18	FSM	ENSG00000085788.14	ENST00000397166.7	4682	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	13.1814591397122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTTTATGTAT	-42	True	NA	86	True	AAGAAA	-17	NA	38231584	38262836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088_38238210_38240274_38240365_38242249_38242386_38245741_38245951_38246232_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039_38260148_38260599
transcript_173292.nic	chr8	+	2552	17	ISM	ENSG00000085788.14	ENST00000397166.7	4682	18	0	2582	0	0	5prime_fragment	FALSE	canonical	3	45	junction_3	13.3824453576318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGATCTAGGCTGCTATT	-42	True	NA	NA	False	AATATA	-18	NA	38231584	38260254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088_38238210_38240274_38240365_38242249_38242386_38245741_38245951_38246232_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039
transcript_173297.known	chr8	-	831	7	FSM	ENSG00000147535.17	ENST00000524616.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	193.638336998528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACATGGTGAACCCT	2	True	NA	NA	False	NA	NA	NA	38269196	38264350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268408_38268881_38268991_38269125
transcript_173300.known	chr8	-	875	7	FSM	ENSG00000147535.17	ENST00000531823.5	875	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	193.904615726393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGAGGCTGAGGAGG	24	True	NA	NA	False	NA	NA	NA	38269174	38264397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268822_38268991_38269125
transcript_173302.known	chr8	-	2134	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	135.839877142989	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-26	True	NA	-20	True	AATAAA	-2	NA	38269224	38263129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_173305.nic	chr8	-	945	7	NIC	ENSG00000147535.17	novel	2134	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	177.053115068771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGGTAAATGTGT	NA	False	NA	-28	True	AGTAAA	-11	NA	38269241	38263137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_38263407_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_173311.known	chr8	-	853	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	172.937368238716	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-9	True	NA	-4	True	AATAAA	-18	NA	38269207	38264738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_173313.known	chr8	-	581	6	FSM	ENSG00000147535.17	ENST00000531109.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	200.482019143862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTCTGACTGATGCAGA	23	True	NA	NA	False	NA	NA	NA	38269175	38264542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268881_38268991_38269125
transcript_173325.known	chr8	+	1668	5	FSM	ENSG00000085788.14	ENST00000519857.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	12.6959639255946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTTATTTAGAAATAAAAA	44	True	NA	-24	True	NA	NA	NA	38231670	38239058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088
transcript_173327.nic	chr8	-	2974	5	NIC	ENSG00000147535.17	novel	2134	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	168	junction_1	162.379955659558	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-36	True	NA	-20	True	AATAAA	-2	NA	38269234	38263129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38268991_38269125
transcript_173338.known	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	59.1121814857141	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	NA	False	NA	-17	True	AATAAA	-18	NA	38269243	38266979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_17334.nic	chr1	+	1597	14	ISM	ENSG00000134371.14	ENST00000649895.1	2364	16	-177	4653	-177	-4653	5prime_fragment	FALSE	canonical	3	294	junction_8	35.7559114986682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACTCTAATACAAAGAA	7	False	NA	NA	False	AAGAAA	-21	NA	193121805	193233040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992
transcript_173347.known	chr8	-	1590	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	42.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACCTTTAACGAAG	-32	True	NA	-38	True	NA	NA	NA	38269230	38267000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38267392_38267896_38268991_38269125
transcript_17335.nic	chr1	+	1407	13	ISM	ENSG00000134371.14	ENST00000649895.1	2364	16	-35	25216	-35	-25216	5prime_fragment	FALSE	canonical	3	294	junction_8	36.8309765460181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAATTTATTAAACTA	112	False	NA	NA	False	NA	NA	NA	193121947	193212477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389
transcript_173352.known	chr8	-	2185	6	FSM	ENSG00000147535.17	ENST00000529359.5	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	141.473672462406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-7	True	NA	-20	True	AATAAA	-2	NA	38269140	38263129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881
transcript_173353.known	chr8	+	1098	1	FSM	ENSG00000272092.1	ENST00000607047.1	1098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGACGTTATAGTGC	NA	False	NA	NA	False	AATAAA	-25	NA	38382363	38383461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38382400_38383500
transcript_17336.nic	chr1	+	1128	9	ISM	ENSG00000134371.14	ENST00000647662.1	1092	11	-321	2805	-4	0	5prime_fragment	FALSE	canonical	3	294	junction_8	39.2141556073824	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGTTGCTTAATTCTTA	-43	True	NA	40	True	NA	NA	NA	193121978	193150381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303
transcript_173364.known	chr8	-	4157	19	FSM	ENSG00000077782.22	ENST00000335922.9	4157	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	351.261030756893	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATCTATGGGCTGTATG	13	False	NA	-20	True	AATAAA	-16	NA	38468621	38412730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38440305_38440374_38457355_38457535_38467980
transcript_17337.known	chr1	-	6132	27	FSM	ENSG00000066279.19	ENST00000294732.11	6132	27	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	46.7942904775975	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTATTCCTGTCTAT	-1	True	NA	39	True	AATAAA	-19	NA	197146694	197084127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
transcript_173379.known	chr8	-	5002	19	FSM	ENSG00000077782.22	ENST00000674380.1	5002	19	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	367.975664285252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTAGGAAATGAATTTT	-5	True	NA	-2	True	TTTAAA	-21	NA	38468132	38411430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419532_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38443396_38443493_38457355_38457535_38467980
transcript_173386.known	chr8	-	4442	18	FSM	ENSG00000077782.22	ENST00000341462.9	4442	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	290.685170781226	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAGAGAAAATGAAATGG	5	True	NA	-4	True	AATAAA	-16	NA	38468601	38411142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38412596_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
transcript_173392.known	chr8	-	4094	18	FSM	ENSG00000077782.22	ENST00000683815.1	4094	18	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_9	233.062089830721	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATCTATGGGCTGTAT	1	True	NA	-21	True	AATAAA	-15	NA	38468633	38412731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
transcript_173395.known	chr8	-	4711	18	FSM	ENSG00000077782.22	ENST00000674474.1	4711	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	331.911919778952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCTATATATTAAAAACAAA	15	True	NA	77	True	NA	NA	NA	38468152	38412879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419532_38419736_38421796_38423176_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
transcript_173409.known	chr8	-	3680	18	FSM	ENSG00000077782.22	ENST00000397113.6	3680	18	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_9	322.08575229884	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGGGCTGTATGAAA	734	False	NA	-17	True	AATAAA	-19	NA	38467900	38412727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419532_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467671
transcript_173421.known	chr8	-	3827	17	FSM	ENSG00000077782.22	ENST00000684654.1	3827	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	307.60023137792	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATCTATGGGCTGTAT	1	True	NA	-21	True	AATAAA	-15	NA	38468633	38412731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38457355_38457535_38467980
transcript_173441.known	chr8	-	5482	16	FSM	ENSG00000077782.22	ENST00000619564.3	5482	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	387.779811519659	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAATGAAATGGCCGT	NA	False	NA	0	True	AATAAA	-20	NA	38468834	38411138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419532_38419736_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38457355_38457535_38467980
transcript_173458.known	chr8	-	2427	7	FSM	ENSG00000077782.22	ENST00000683795.1	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	206.577669009342	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGTTAAACACAAATAGAA	5	True	NA	NA	False	NA	NA	NA	38468601	38423726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
transcript_173461.known	chr8	-	1898	6	FSM	ENSG00000077782.22	ENST00000496296.5	1898	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	309.343563049241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTTTTTCCTCTCAC	-1	True	NA	NA	False	TATAAA	-36	NA	38468635	38424016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38457355_38457535_38467980
transcript_173462.known	chr8	-	2714	6	FSM	ENSG00000077782.22	ENST00000683276.1	2714	6	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	41.7296057973233	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATTCTTTTTTTTTTTT	5	True	NA	NA	False	AATAGA	-17	NA	38468601	38423691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38424700_38426121_38426246_38427920_38428436_38429681_38429949_38457355_38457535_38467980
transcript_173469.nic	chr8	-	1426	5	ISM	ENSG00000077782.22	ENST00000683815.1	4094	18	-212	15331	-11	-51	5prime_fragment	FALSE	canonical	3	462	junction_1	141.557408848848	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAAAAGAAATTGCATG	NA	False	NA	4	True	NA	NA	NA	38468845	38428062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
transcript_17347.known	chr1	-	8595	11	FSM	ENSG00000177888.8	ENST00000367405.5	8595	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	3.19374388453426	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATATCTAGGTTTTA	-4	True	NA	NA	False	AATAAA	-22	NA	197201293	197153681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197160015_197172159_197172249_197175009_197175116_197176563_197176671_197178416_197178513_197180987_197181118_197188291_197188440_197190761_197190832_197191691_197191900_197199353_197200591_197201222
transcript_173473.known	chr8	+	2240	3	FSM	ENSG00000165046.13	ENST00000519476.6	2240	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATACTTTAGGGTCCAC	66	False	NA	NA	False	ATTAAA	-30	NA	38386302	38394434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38386569_38387949_38388031_38392541
transcript_173486.nic	chr8	+	2829	13	NIC	ENSG00000147526.20	novel	7770	13	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	11.8836956466506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGCCTACTGCTGCCT	-2	True	NA	NA	False	NA	NA	NA	38787203	38848142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827289_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
transcript_173488.known	chr8	+	7770	13	FSM	ENSG00000147526.20	ENST00000317827.9	7770	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.6828296001589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGGGGTGTGTGTGGT	0	True	NA	6	True	AATAAA	-19	NA	38787235	38853028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827376_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
transcript_17349.known	chr1	-	8365	23	FSM	ENSG00000213047.13	ENST00000620048.6	8365	23	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	4.19858299591109	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGGTGATGACTCT	-8	True	NA	NA	False	AATAAA	-17	NA	197775480	197504747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197510973_197511727_197511945_197512870_197512954_197539963_197540072_197540958_197541016_197545921_197545991_197546732_197546774_197553021_197553113_197583151_197583254_197595207_197595334_197607072_197607175_197611930_197611977_197617658_197617760_197642710_197642822_197645689_197645744_197647054_197647115_197652234_197652316_197658299_197658370_197672036_197672157_197674119_197674170_197715030_197715075_197772867_197772933_197775138
transcript_173498.known	chr8	+	4632	23	FSM	ENSG00000168615.13	ENST00000676765.1	4632	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	38.0176122734609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTAAGTTTTTAAAAAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	38996765	39105445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39076146_39076276_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_173499.known	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_18	20.9863361226984	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	25	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_173503.known	chr8	+	3894	22	FSM	ENSG00000168615.13	ENST00000677359.1	3894	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	31.7813533659079	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	-34	True	NA	-14	True	AATACA	-1	NA	38996913	39104968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091242_39091347_39101862_39101931_39103606
transcript_173504.known	chr8	+	5077	22	FSM	ENSG00000168615.13	ENST00000676617.1	5077	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	38.5877096737871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	-34	True	NA	-14	True	AATACA	-1	NA	38996913	39104968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39076146_39076276_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39091347_39101862_39101931_39103606
transcript_173505.known	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	82.9832647117611	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-3	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
transcript_173506.known	chr8	-	469	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	213.264051249983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAAGTGATGGCAGCA	-3	True	NA	NA	False	NA	NA	NA	38996509	38991371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
transcript_173507.known	chr8	-	3295	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	227.394419945218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	23	True	NA	0	True	AATAAA	-21	NA	38996483	38988807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
transcript_173511.known	chr8	-	1631	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	213.735038462735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-3	True	NA	-3	True	AATAAA	-15	NA	38996509	38990804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
transcript_173512.nic	chr8	-	1433	4	NIC	ENSG00000169490.17	novel	1631	4	NA	NA	-8	0	intron_retention	FALSE	canonical	3	36	junction_3	218.445009607046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-11	True	NA	-3	True	AATAAA	-15	NA	38996517	38990804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_38991546_38993544_38993661_38995317_38995795_38996418
transcript_173514.nic	chr8	+	1784	12	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	194.825796313247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902303	39928426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_173516.nnic	chr8	+	1647	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	188.580592850908	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902292	39928426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_173517.nnic	chr8	+	2011	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	188.580592850908	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	NA	False	NA	NA	False	AATAAA	-21	NA	39902292	39928790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_173523.nnic	chr8	+	1505	10	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	187.06920882093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902313	39928426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_39902449_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_173527.nnic	chr8	+	414	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	18	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	197	junction_3	277.378201498724	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	39902292	39915721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
transcript_173530.known	chr8	+	1709	12	FSM	ENSG00000131203.13	ENST00000522495.5	1709	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	161.988674229134	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	22	False	NA	123	True	AATAAA	-17	NA	39902374	39928426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_173535.known	chr8	-	2471	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	9.65516557197349	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-3	True	NA	NA	False	AGTAAA	-20	NA	40897826	40530589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_173536.known	chr8	-	2250	6	FSM	ENSG00000165061.15	ENST00000315769.11	2250	6	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_2	17.9666357451806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-10	False	NA	NA	False	AGTAAA	-20	NA	40897833	40530589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_17354.known	chr1	+	600	3	FSM	ENSG00000203724.11	ENST00000367393.8	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACAAATGTTTGTGTGT	0	True	NA	NA	False	AATAAA	-9	NA	197902629	197907362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_197902914_197905795_197905898_197907148
transcript_173544.nic	chr8	-	2008	4	ISM	ENSG00000165061.15	ENST00000315769.11	2250	6	-28	165179	-28	1227	5prime_fragment	FALSE	canonical	3	36	junction_2	9.46337971105226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCACATGGCAAAACCAG	NA	False	NA	NA	False	NA	NA	NA	40897861	40695768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_40697402_40767640_40767731_40825574_40825681_40897682
transcript_173548.known	chr8	-	4464	3	FSM	ENSG00000104332.12	ENST00000220772.8	4464	3	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_1	48	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTGTGAGCTGTGACT	-16	True	NA	-10	True	ACTAAA	-18	NA	41309473	41261961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41265490_41303460_41303539_41308615
transcript_17355.known	chr1	+	4114	10	FSM	ENSG00000151414.15	ENST00000367385.9	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	14.2499729261168	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGGTATCTATGATTT	-33	True	NA	NA	False	AATAAA	-17	NA	198156997	198322420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_198157277_198232552_198232638_198253039_198253181_198262574_198262638_198264124_198264236_198277960_198278070_198278953_198279062_198292944_198293040_198297126_198297241_198319411
transcript_173559.nic	chr8	-	1089	2	ISM	ENSG00000104332.12	ENST00000220772.8	4464	3	-153	41499	-153	-41497	5prime_fragment	FALSE	canonical	3	1750	junction_1	0	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAGCGTTTCTAGCT	NA	False	NA	NA	False	NA	NA	NA	41309626	41303460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_41303539_41308615
transcript_173572.known	chr8	+	6298	13	FSM	ENSG00000158669.11	ENST00000396987.7	6298	13	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	43.0989655714999	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTTTGATTTATTAAA	3	True	NA	NA	False	AATAAA	-17	NA	41578199	41625001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_173575.nic	chr8	+	3464	13	NIC	ENSG00000158669.11	novel	6298	13	NA	NA	34	520	intron_retention	FALSE	canonical	3	26	junction_1	114.597453675415	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGGACTTCTCCCTTTA	5	True	NA	NA	False	AATAAA	-18	NA	41578248	41621914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_41578581_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_173577.nic	chr8	+	4153	12	NIC	ENSG00000158669.11	novel	6298	13	NA	NA	-150	520	intron_retention	FALSE	canonical	3	342	junction_1	36.9269996856653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGGACTTCTCCCTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	41578037	41621914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_173585.nnic	chr8	+	1755	9	NNC	ENSG00000147536.12	novel	3770	8	NA	NA	-42	-267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	40.8197256237717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGGTTCTGAAACAGG	70	False	NA	79	True	AATAAA	-25	NA	41529175	41544763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990_41542126_41543958
transcript_173586.known	chr8	+	3770	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	15.9770243200181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	5	True	NA	22	True	AATAAA	-21	NA	41529260	41545030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
transcript_173589.known	chr8	+	3873	7	FSM	ENSG00000147536.12	ENST00000523277.6	3873	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	17.0627925290349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	-7	True	NA	22	True	AATAAA	-21	NA	41529248	41545030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808
transcript_173592.known	chr8	+	808	6	FSM	ENSG00000147533.18	ENST00000518270.5	808	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	278.799282638962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTGTAGGACTCTGT	NA	False	NA	NA	False	NA	NA	NA	41490395	41509769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41490567_41490832_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_173593.known	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	277.40252342039	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	-12	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
transcript_173601.known	chr8	+	494	4	FSM	ENSG00000147536.12	ENST00000520631.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	12.5521135891752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACCTGGAGGGATT	2	True	NA	NA	False	NA	NA	NA	41529226	41537301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179
transcript_173605.known	chr8	+	1595	2	FSM	ENSG00000287535.1	ENST00000665362.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	41566857	41568641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41566924_41567112
transcript_173608.known	chr8	+	2099	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	20.4266982158155	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	8	True	NA	NA	False	AATAAA	-16	NA	41490581	41510980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_173609.known	chr8	+	2022	3	FSM	ENSG00000147536.12	ENST00000520710.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGCAAAACATTCCTA	-4	True	NA	NA	False	NA	NA	NA	41529220	41538036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41530299_41536359_41536447_41537179
transcript_17362.known	chr1	+	1391	3	FSM	ENSG00000230623.7	ENST00000654000.1	1391	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATTTTCATGAGTCAC	48	False	NA	10	True	AGTAAA	-15	NA	200411720	200474725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200411963_200444613_200444946_200473908
transcript_173621.known	chr8	-	1770	1	FSM	ENSG00000260588.1	ENST00000563810.1	1770	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGACCGGGAACTCCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	41829934	41828164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41828200_41829900
transcript_173622.known	chr8	-	9153	17	FSM	ENSG00000083168.11	ENST00000265713.8	9153	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	4.09219913371771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTTGCATGTGGAA	-1	True	NA	0	True	AATAAA	-21	NA	42051987	41929478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42051900
transcript_173623.known	chr8	-	8006	18	FSM	ENSG00000083168.11	ENST00000396930.4	8006	18	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_17	5.21244186279429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAGGTAAAAAAAAAAAAAA	-4	True	NA	NA	False	NA	NA	NA	42051990	41930760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42049575_42049708_42051900
transcript_173626.known	chr8	+	3669	10	FSM	ENSG00000070718.12	ENST00000518421.5	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	29.665210118218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGTCCTAAGTGGTT	NA	False	NA	21	True	AATAAA	-17	NA	42152945	42171182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42153106_42154477_42154537_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_173628.known	chr8	+	3494	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	11.7046999107196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	6	True	NA	22	True	AATAAA	-18	NA	42153062	42171183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_173635.known	chr8	+	966	8	FSM	ENSG00000070718.12	ENST00000521280.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	32.231306874794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCATAAAATACATGACC	17	True	NA	NA	False	NA	NA	NA	42153073	42169011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42153106_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_173638.known	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	8.67107259801231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	1559	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_173639.known	chr8	-	3062	14	FSM	ENSG00000104368.19	ENST00000220809.9	3062	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	3.54347470962493	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACGAGGAGCCATGG	-1	True	NA	NA	False	GGGGCT	-39	NA	42207565	42174717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
transcript_17364.known	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	376	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	-7	True	NA	1	True	AATAAA	-20	NA	200411799	200475513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200411963_200473908
transcript_173643.known	chr8	-	2693	14	FSM	ENSG00000104368.19	ENST00000679151.1	2693	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	4.71432413724448	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGAATGGTTTTGT	NA	False	NA	-2	True	AATAAA	-32	NA	42207690	42175232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193233_42207493
transcript_173644.known	chr8	-	2599	15	FSM	ENSG00000104368.19	ENST00000429089.6	2599	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.50556304929804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGAATGGTTTTGT	-1	True	NA	-2	True	AATAAA	-32	NA	42207565	42175232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42206646_42206699_42207493
transcript_173645.known	chr8	+	3938	22	FSM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_15	13.2166664522051	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	-16	True	NA	24	True	AATAAA	-26	NA	42271301	42332460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_173652.nic	chr8	+	2553	21	ISM	ENSG00000104365.16	ENST00000520810.6	3938	22	-62	3146	-62	0	5prime_fragment	TRUE	canonical	3	59	junction_15	13.4999074070899	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGTTTGTTTGCTTGT	1065	False	NA	25	True	AATAGA	-42	NA	42271239	42329314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123
transcript_173655.known	chr8	+	2501	21	FSM	ENSG00000104365.16	ENST00000517890.5	2501	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	21.0249851367367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCCAGGGGTCTCTGGT	-2	True	NA	NA	False	GGGGCT	-41	NA	42271315	42331132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42271470_42272082_42272206_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_173663.known	chr8	+	5002	19	FSM	ENSG00000104365.16	ENST00000520201.5	5002	19	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	20.267653484747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATGACAGTGGGAAATA	33	False	NA	19	True	AATAAA	-21	NA	42271388	42332455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42271470_42272082_42272206_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_173668.known	chr8	+	447	2	FSM	ENSG00000104365.16	ENST00000518983.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCTCTTAGTCTCTAT	14	False	NA	NA	False	AATAAA	-13	NA	42271369	42272429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42271470_42272082
transcript_17367.known	chr1	+	319	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	163	1	4	0	multi-exon	FALSE	canonical	3	277	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	23	False	NA	11	True	AATAAA	-22	NA	200411829	200415550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200411963_200415364
transcript_173670.known	chr8	+	1290	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	23.3238075793812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	0	True	NA	16	True	AATAAA	-17	NA	42338493	42371808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_173673.nic	chr8	+	1250	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	23.3249985113731	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	9	False	NA	16	True	AATAAA	-17	NA	42338475	42371808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_173681.known	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	TRUE	canonical	3	1159	junction_5	72.4161498937364	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	13	True	NA	66	True	NA	NA	NA	42391879	42405937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
transcript_173688.known	chr8	-	3752	11	FSM	ENSG00000168575.10	ENST00000520262.6	3752	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	35.2958921122558	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	15	True	NA	-10	True	AATAAA	-16	NA	42501231	42416474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42501030
transcript_173689.known	chr8	-	2284	11	FSM	ENSG00000168575.10	ENST00000520179.5	2284	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	38.1980365987573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTCTTCCAGCTGCA	-6	True	NA	NA	False	NA	NA	NA	42541512	42417802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541451
transcript_173690.nnic	chr8	-	3935	11	NIC	ENSG00000168575.10	novel	3657	11	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_10	20.7376469253385	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	15	True	NA	-10	True	AATAAA	-16	NA	42541921	42416474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541537
transcript_173696.known	chr8	+	2958	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	262.097098207685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGGTATAGAGCCAAGT	2	True	NA	NA	False	AATAAA	-36	NA	42541154	42555193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
transcript_173697.known	chr8	+	878	4	FSM	ENSG00000176209.12	ENST00000498447.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	233.350951715794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGGTGACTTGACCTT	43	True	NA	NA	False	NA	NA	NA	42541657	42552829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42541706_42546468_42546607_42548374_42548781_42552543
transcript_173698.known	chr8	+	793	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	99.3724755095136	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	-2	True	NA	11	True	AATAAA	-27	NA	42541612	42552980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
transcript_173699.known	chr8	+	3704	4	FSM	ENSG00000176209.12	ENST00000417410.7	3704	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	236.195305250173	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGTATAGAGCCAAGTAA	-30	True	NA	NA	False	AATAAA	-38	NA	42541584	42555195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42542374_42546468_42546607_42548655_42548781_42552543
transcript_173700.known	chr8	+	691	4	FSM	ENSG00000176209.12	ENST00000416469.6	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	248.439127353161	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCAGAAAAAGAGCAAC	9	False	NA	NA	False	NA	NA	NA	42541792	42552608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42542156_42546468_42546607_42548655_42548781_42552543
transcript_173701.known	chr8	-	2161	3	FSM	ENSG00000131931.8	ENST00000254250.7	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTCTTTTGTAGA	-9	True	NA	-9	True	ATTAAA	-18	NA	42843325	42836673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42838337_42839185_42839382_42843023
transcript_173705.known	chr8	-	1943	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAAGTGTCTTTTGTA	11	True	NA	-11	True	ATTAAA	-16	NA	42843305	42836675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42838337_42843023
transcript_173706.known	chr8	+	14348	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	15.2593601622859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	17	True	NA	108	True	AATAAA	-15	NA	42896977	43030535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
transcript_173712.nic	chr8	+	2110	19	ISM	ENSG00000168172.9	ENST00000307602.9	14348	22	-174	20187	-142	0	5prime_fragment	FALSE	canonical	3	32	junction_16	15.2907016044247	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATGAAGCAAATGGA	273	False	NA	NA	False	AAGAAA	-4	NA	42896803	43010348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304
transcript_173716.known	chr8	-	4116	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	31.427164470672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTTATTTTTCTGTT	-19	True	NA	-11	True	AATAAA	-23	NA	42896723	42853296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_173717.known	chr8	-	3764	7	FSM	ENSG00000120925.16	ENST00000527424.6	3764	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	14.9303940559741	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTGTTATTTTTC	19	True	NA	-15	True	AATAAA	-19	NA	42896605	42853300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_173725.known	chr8	-	2023	6	FSM	ENSG00000120925.16	ENST00000240159.8	2023	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	45.3722382079615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-31	True	NA	NA	False	NA	NA	NA	42896655	42855247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_173726.known	chr8	-	1265	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	37.8068776811839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGGAAAATTCAGTATT	36	True	NA	-7	True	AATAAA	-13	NA	42896588	42855708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_173730.known	chr8	-	1169	6	FSM	ENSG00000120925.16	ENST00000528318.5	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	16.3095064303001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	-19	True	NA	NA	False	AAAAAG	-11	NA	42896723	42861329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_173735.known	chr8	+	1667	9	FSM	ENSG00000168522.13	ENST00000302279.8	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_5	48.6074839916653	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	-5	True	NA	32	True	AATAAA	-21	NA	43056322	43085785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_173741.known	chr8	+	982	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	204.610032271447	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	2	True	NA	NA	False	AAGAAA	-10	NA	43056329	43085193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_173742.known	chr8	+	4676	8	FSM	ENSG00000168522.13	ENST00000526755.5	4676	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	254.326481483296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAGAAGTTTGATTTT	NA	False	NA	35	True	AATAAA	-24	NA	43056307	43085788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43080442_43083117_43083181_43084709_43084882_43085159
transcript_173743.nic	chr8	+	1496	7	NIC	ENSG00000168522.13	novel	1667	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	38	junction_1	212.450582489199	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	NA	False	NA	32	True	AATAAA	-21	NA	43056292	43085785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_43056547_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_173746.known	chr8	+	750	5	FSM	ENSG00000168522.13	ENST00000524546.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	273.547413623306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTAGCCTGTTGATTA	27	False	NA	12	True	AATAAA	-35	NA	43056354	43070353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43070101
transcript_173747.known	chr8	+	2342	4	FSM	ENSG00000185900.11	ENST00000674727.1	2342	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATAAACATCGGGATGC	3	True	NA	NA	False	NA	NA	NA	43093514	43105632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43093564_43097523_43097616_43102504_43102601_43103527
transcript_173748.known	chr8	+	5227	18	FSM	ENSG00000165102.15	ENST00000379644.9	5227	18	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_9	16.1463891428685	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTTTCACAAACAGATC	-6	True	NA	36	True	AGTAAA	-18	NA	43140463	43202855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43140615_43146947_43147064_43158574_43158712_43158922_43159045_43161437_43161508_43169172_43169243_43170584_43170695_43172309_43172387_43173712_43173744_43178073_43178235_43182144_43182261_43191473_43191596_43192303_43192431_43193756_43193844_43196947_43197026_43197671_43197743_43197839_43197953_43199387
transcript_173756.known	chr8	+	3625	20	FSM	ENSG00000164808.17	ENST00000297423.9	3625	20	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_17	13.4726562107834	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGCTTTTTAATTAA	-5	True	NA	NA	False	NA	NA	NA	47260937	47736306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_17376.known	chr1	-	4864	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAAAGGAGATATT	-13	True	NA	-33	True	AATAAA	-18	NA	200410036	200404950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200409724_200409945
transcript_173761.known	chr8	+	2745	19	FSM	ENSG00000164808.17	ENST00000522117.5	2745	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	36.2672266432803	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGTAGTTATTTGTT	13	True	NA	NA	False	NA	NA	NA	47260955	47735511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47260992_47279861_47280018_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_17377.known	chr1	-	4891	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	1	True	NA	-22	True	AATAAA	-29	NA	200410056	200404939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200409720_200409945
transcript_173772.known	chr8	-	1252	1	FSM	ENSG00000221869.5	ENST00000408965.4	1252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCCTATATTCGCA	-1	True	NA	-1	True	AATAAA	-18	NA	47738164	47736912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_47736900_47738200
transcript_173773.known	chr8	-	12784	85	FSM	ENSG00000253729.8	ENST00000338368.7	12784	85	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	205.928817809784	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGTTGATGTAACATT	801	False	NA	NA	False	AGTAAA	-5	NA	47960178	47773734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
transcript_17378.known	chr1	-	2933	3	FSM	ENSG00000162702.8	ENST00000367352.3	2933	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	82.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGACAAAAAAAA	-4	True	NA	63	True	TTTAAA	-4	NA	200409992	200406729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200409453_200409560_200409724_200409945
transcript_173783.known	chr8	+	3157	18	FSM	ENSG00000104738.18	ENST00000649838.1	3157	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	510.55028321949	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTCTCTAGTAAAGATAA	-7	True	NA	118	True	NA	NA	NA	47960897	47977089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969278_47969402_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_17379.known	chr1	-	7291	30	FSM	ENSG00000118193.12	ENST00000367350.5	7291	30	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	13.7248310343091	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTCGTGGTCTATGCTT	-6	True	NA	-4	True	AATAAA	-18	NA	200620751	200551499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200560721_200560881_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
transcript_173793.known	chr8	+	4062	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	128.460110540198	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	-9	True	NA	21	True	AATAAA	-21	NA	47960940	47978160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_17383.known	chr1	-	2229	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	10.3292728471573	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-2	True	NA	80	True	AATAAA	-23	NA	200669907	200644036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_173834.known	chr8	+	4183	16	FSM	ENSG00000104738.18	ENST00000262105.6	4183	16	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_10	103.98256264073	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	-14	True	NA	21	True	AATAAA	-21	NA	47960935	47978160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_173835.known	chr8	+	1322	5	FSM	ENSG00000169139.12	ENST00000521346.5	1322	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1920.43059950106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAACAAAAAGGAAATAGG	-10	True	NA	-64	True	NA	NA	NA	48008418	48061480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_48008471_48034865_48035062_48043032_48043182_48049852_48049979_48060681
transcript_173837.known	chr8	+	4342	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	0	0	0	0	multi-exon	FALSE	canonical	3	3458	junction_1	208.90348648758	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	2	True	NA	19	True	AATAAA	-19	NA	48008430	48064708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
transcript_173839.known	chr8	+	625	4	FSM	ENSG00000169139.12	ENST00000520595.2	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1859.22391216216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAATACACATTAAGTAAA	8064	False	NA	-9	True	ATTAAA	-11	NA	48043032	48060903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_48043182_48043498_48043627_48049852_48049979_48060681
transcript_173840.known	chr8	+	918	3	FSM	ENSG00000169139.12	ENST00000523432.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGGTAAATATTTGTT	-14	True	NA	50	True	NA	NA	NA	48008414	48061417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_48008471_48049852_48049979_48060681
transcript_173841.known	chr8	-	4044	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	16.1046577113579	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTCTCCCATGGCCT	3	True	NA	-21	True	AATAAA	-18	NA	51899036	51817582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
transcript_173845.known	chr8	+	4085	3	FSM	ENSG00000228801.7	ENST00000518942.2	4085	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTTGCTACAACCTGG	3	True	NA	-5	True	ATTAAA	-4	NA	51899324	51949874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_51899847_51913056_51913181_51946435
transcript_173847.known	chr8	-	1140	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	3.34477204006491	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGCTTTTGAAGTGTG	0	True	NA	NA	False	ATTAAA	-16	NA	52565430	52534036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
transcript_173849.known	chr8	-	6614	24	FSM	ENSG00000023287.13	ENST00000435644.6	6614	24	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_12	47.5617994161817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTTCTATTTAATCTT	20	True	NA	-14	True	AATAAA	-16	NA	52714423	52622458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_52623860_52624716_52624788_52628040_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_17385.nnic	chr1	-	1977	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	27.5645706579217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-2	True	NA	80	True	AATAAA	-23	NA	200669907	200644036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_173860.nic	chr8	-	3230	15	ISM	ENSG00000023287.13	ENST00000025008.10	6636	24	-21	34689	10	738	5prime_fragment	FALSE	canonical	3	241	junction_3	29.8315850968023	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAGAGTTAGTATG	-13	True	NA	NA	False	AATAAA	-35	NA	52714456	52657146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_173861.nic	chr8	-	3134	15	ISM	ENSG00000023287.13	ENST00000025008.10	6636	24	-21	34785	10	642	5prime_fragment	FALSE	canonical	3	241	junction_3	29.8315850968023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAAAAGAACTACTGTC	-13	True	NA	NA	False	AGTAAA	-32	NA	52714456	52657242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_173869.nic	chr8	-	2297	14	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_13	62.5417257166869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	253	False	NA	-1	True	AATAAA	-30	NA	53843019	53715669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842503
transcript_17387.nic	chr1	-	1551	5	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-103	6406	-103	0	5prime_fragment	FALSE	canonical	3	54	junction_1	13.0192165662915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTGAAATTTTAAATGT	NA	False	NA	NA	False	AAAAAG	-7	NA	200670010	200650442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_173870.known	chr8	-	1892	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	56.2665886124514	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	230	False	NA	-62	True	AAGAAA	-27	NA	53843042	53715730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_173872.known	chr8	-	2120	14	FSM	ENSG00000047249.18	ENST00000359530.7	2120	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_7	26.534782353662	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	27	True	NA	1	True	AATAAA	-27	NA	53843245	53715542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_173873.known	chr8	-	1734	14	FSM	ENSG00000047249.18	ENST00000524164.5	1734	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	63.8622778527699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGTGAACACTGTTTG	-21	True	NA	NA	False	NA	NA	NA	53843293	53715899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53833060_53833087_53841577_53841726_53843033
transcript_173875.nic	chr8	-	1882	13	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	72.922714034944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	247	False	NA	-1	True	AATAAA	-30	NA	53843025	53715669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_173876.known	chr8	-	2365	13	FSM	ENSG00000047249.18	ENST00000355221.7	2365	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	53.3689334309348	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTCTATCAATCTATG	NA	False	NA	-13	True	AATAAA	-13	NA	53843558	53715556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_173882.known	chr8	-	1672	3	FSM	ENSG00000047249.18	ENST00000521335.1	1672	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCTCTACTAAAAATACAA	13	True	NA	NA	False	NA	NA	NA	53843259	53831788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53833087_53841577_53841726_53843033
transcript_173883.known	chr8	+	1664	5	FSM	ENSG00000147509.14	ENST00000276500.4	1664	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAGCACAAGAATT	22	False	NA	NA	False	AAGAAA	-23	NA	53880893	53959274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_53881085_53939575_53939725_53946664_53946749_53954075_53954311_53958269
transcript_173886.known	chr8	-	2777	10	FSM	ENSG00000187735.15	ENST00000521604.7	2777	10	0	0	0	0	multi-exon	FALSE	canonical	2	548	junction_4	318.306553071713	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACATTTTGTCATTTTA	-1	True	NA	-4	True	AATAAA	-23	NA	54022448	53966555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
transcript_173888.known	chr8	-	2718	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	0	0	0	0	multi-exon	FALSE	canonical	2	105	junction_8	500.783869922944	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTCATTTTATTTA	-1	True	NA	0	True	AATAAA	-27	NA	54022448	53966551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
transcript_17389.known	chr1	+	7352	17	FSM	ENSG00000118200.15	ENST00000358823.7	8017	17	665	0	-221	0	multi-exon	FALSE	canonical	3	40	junction_8	17.2942141697737	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCCTTTTCTGTTTCTT	-22	True	NA	22	True	AATAAA	-15	NA	200739557	200860704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200739967_200760838_200761099_200807375_200807538_200815560_200815645_200832199_200832342_200832705_200832846_200841993_200842088_200844781_200844870_200847209_200847293_200847639_200847710_200848031_200850235_200852540_200852678_200853274_200853496_200854816_200854890_200856009_200856126_200857305_200857425_200857753
transcript_173893.nic	chr8	-	904	6	ISM	ENSG00000187735.15	ENST00000640382.1	1234	10	-46	16677	-46	6411	5prime_fragment	FALSE	canonical	3	1097	junction_1	180.325705322342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTGTGTATATTCATA	NA	False	NA	NA	False	NA	NA	NA	54022502	53986964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
transcript_173896.known	chr8	-	635	4	FSM	ENSG00000187735.15	ENST00000520534.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_3	36.8088153692684	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGATTCAAATGGTTGC	299	False	NA	NA	False	NA	NA	NA	54022148	53993375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53993756_53999944_54000051_54010429_54010493_54022062
transcript_173898.known	chr8	-	586	3	FSM	ENSG00000187735.15	ENST00000518784.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_2	44.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGGATGATTAAAAGAAT	288	False	NA	NA	False	NA	NA	NA	54022159	53999624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54000051_54010429_54010493_54022062
transcript_173913.known	chr8	-	2526	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	458.404502050318	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	394	False	NA	-2	True	AATAAA	-23	NA	54101554	54046367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
transcript_173914.known	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	TRUE	canonical	3	1369	junction_4	81.1664955508121	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	1	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_173917.nnic	chr8	-	2543	9	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	114	junction_6	458.354649125543	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-68	True	NA	-2	True	AATAAA	-23	NA	54102016	54046367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065787_54065814_54100907_54100940_54101754
transcript_173934.nic	chr8	-	2517	8	NIC	ENSG00000120992.18	novel	2515	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	487.291556693208	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-68	True	NA	-2	True	AATAAA	-23	NA	54102016	54046367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54100907_54100940_54101754
transcript_173936.known	chr8	-	1308	8	FSM	ENSG00000120992.18	ENST00000343231.10	1308	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	516.020407759703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTGTTTTTTCTT	120	False	NA	39	True	AAGAAA	-4	NA	54101828	54047406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54065747_54065814_54100907_54100940_54101754
transcript_173940.known	chr8	-	2482	8	FSM	ENSG00000120992.18	ENST00000618914.4	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	475.314933190917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-69	True	NA	-2	True	AATAAA	-23	NA	54102017	54046367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_173957.known	chr8	+	1729	5	FSM	ENSG00000137547.9	ENST00000260102.9	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_3	50.3115294937453	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTGTTCAGCTCGATT	-4	True	NA	NA	False	NA	NA	NA	54135240	54148514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_54135392_54136510_54136666_54137267_54137434_54142662_54142787_54147381
transcript_173959.known	chr8	+	2346	2	FSM	ENSG00000164736.6	ENST00000297316.5	2346	2	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	0	774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTTTAGCATTTTATTT	-1	True	NA	15	True	AATAAA	-24	NA	54457934	54460892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_54458446_54459057
transcript_173962.known	chr8	-	2573	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	16.2556112760851	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	34	False	55773397	-14	True	AATAAA	-1	NA	55773378	55738757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_173970.known	chr8	-	2400	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCATTTGAGTAGC	-24	True	NA	NA	False	ATTAAA	-18	NA	55773367	55760772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_55763029_55763935_55763981_55773268
transcript_173971.known	chr8	-	826	3	FSM	ENSG00000167904.16	ENST00000522576.5	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	65	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAATAAGAAAATTT	34	False	55773397	-84	True	ATTAAA	-29	NA	55773378	55762399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_55763029_55763935_55763981_55773226
transcript_173976.known	chr8	+	4477	13	FSM	ENSG00000137574.11	ENST00000260129.6	4477	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	18.2579891189218	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAAGTGTTCTAGTCT	-7	True	NA	NA	False	GATAAA	-38	NA	55773445	55826445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55810880_55811098_55813039_55813119_55824580
transcript_173982.nic	chr8	+	2038	8	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-16	27225	-16	222	5prime_fragment	FALSE	canonical	3	160	junction_3	17.0209954384074	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACACTAAATATGCTTCA	-23	True	NA	NA	False	NA	NA	NA	55773429	55799220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913
transcript_173984.nic	chr8	+	971	4	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-414	40163	-414	-12716	5prime_fragment	FALSE	canonical	3	160	junction_3	23.6126143312331	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCAAAAGAAATACTTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	55773031	55786282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237
transcript_173985.nic	chr8	+	1143	3	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-631	40554	-631	-13107	5prime_fragment	FALSE	canonical	3	203	junction_1	6	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATTAATTTACTTTT	NA	False	NA	NA	False	NA	NA	NA	55772814	55785891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_55773720_55782747_55782813_55785718
transcript_173987.known	chr8	+	5808	13	FSM	ENSG00000254087.8	ENST00000520220.6	5808	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	28.603127257153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTAGAATCTCCCTG	3	True	NA	NA	False	AATAAA	-14	NA	55879834	56014168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_55880104_55941854_55941929_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
transcript_173990.known	chr8	+	5872	13	FSM	ENSG00000254087.8	ENST00000519728.6	5872	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	22.1376690030565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTAGAATCTCCCTGA	3	True	NA	NA	False	AATAAA	-15	NA	55879834	56014169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_55880104_55941854_55941992_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
transcript_173995.known	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4094.84719562959	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56074510	56073053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
transcript_173996.known	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_3	171.822259584982	2474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-1	True	NA	-14	True	AATAAA	-19	NA	56074506	56073053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
transcript_173997.known	chr8	-	737	3	FSM	ENSG00000008988.11	ENST00000521289.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_2	205.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTGAGGTGGAAGTCA	-1	True	NA	-87	True	NA	NA	NA	56074506	56073126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56074160_56074380
transcript_173998.known	chr8	-	671	3	FSM	ENSG00000008988.11	ENST00000518875.5	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_2	63.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAACGATAAACACTTG	0	True	NA	NA	False	AATGAA	-42	NA	56074498	56073315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073769_56074059_56074160_56074380
transcript_173999.known	chr8	-	1479	5	FSM	ENSG00000008988.11	ENST00000678683.1	1479	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3779.811263476	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATATTTTCACCAAGAG	NA	False	NA	NA	False	NA	NA	NA	56074510	56068810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56069381_56072667_56073273_56073694_56073769_56074059_56074160_56074380
transcript_174000.known	chr8	-	752	3	FSM	ENSG00000008988.11	ENST00000524349.5	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	8670	junction_2	142	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCAGAATACTGGCAG	-1	True	NA	-2	True	AATAAA	-31	NA	56074506	56073041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56073769_56074059
transcript_174001.known	chr8	-	423	3	FSM	ENSG00000008988.11	ENST00000520627.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4477	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56074510	56073053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56073769_56074380
transcript_174002.known	chr8	-	424	3	FSM	ENSG00000008988.11	ENST00000519606.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4271.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGACCAGTTGTTA	-1	True	NA	-35	True	NA	NA	NA	56074506	56073074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56074059_56074160_56074380
transcript_174003.known	chr8	-	7311	5	FSM	ENSG00000181690.8	ENST00000316981.8	7311	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	7.69740215917033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGTAGATCTTCCTGA	9	True	NA	-19	True	AATAAA	-18	NA	56211273	56160908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56179408_56179514_56211120
transcript_174004.known	chr8	-	1899	4	FSM	ENSG00000181690.8	ENST00000429357.2	1899	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	17.6823829464998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGGGACATGGATTCA	-18	True	NA	NA	False	NA	NA	NA	56211300	56166242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56211120
transcript_174005.known	chr8	-	1684	3	FSM	ENSG00000181690.8	ENST00000423799.6	1684	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCTTTTAAACTGAGC	-18	True	NA	NA	False	TATAAA	-6	NA	56211300	56166098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56167504_56171090_56171190_56211120
transcript_174006.known	chr8	+	567	6	FSM	ENSG00000170791.18	ENST00000523532.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	99.1596692209086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGGAAATATGCCCTAT	0	True	NA	-37	True	NA	NA	NA	56211788	56217412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56216679_56216755_56217330
transcript_174008.known	chr8	+	1670	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	212.473968993851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	9	False	NA	17	True	AATAAA	-20	NA	56211797	56218619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
transcript_174010.known	chr8	+	1805	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	220.813694095271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	9	False	NA	NA	False	NA	NA	NA	56211797	56218798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
transcript_174014.known	chr8	+	1550	5	FSM	ENSG00000170791.18	ENST00000396723.9	1550	5	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	209.737186736163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGAGTCTAAAACCAAG	10	False	NA	-78	True	AATGAA	-6	NA	56211798	56218524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56217330
transcript_174017.known	chr8	+	573	4	FSM	ENSG00000170791.18	ENST00000521831.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	202.000550054257	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTCAAGTGGAGA	NA	False	NA	54	True	NA	NA	NA	56211685	56217538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56214597_56214668_56216388_56216532_56217330
transcript_174019.known	chr8	+	1697	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	117.423260992966	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	0	True	NA	NA	False	NA	NA	NA	56211788	56218809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
transcript_174021.known	chr8	+	559	6	FSM	ENSG00000170791.18	ENST00000523667.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	102.041952156944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAATGTTTGCATTAAA	0	True	NA	-20	True	NA	NA	NA	56211788	56217429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216507_56216679_56216755_56217330
transcript_174022.known	chr8	+	552	6	FSM	ENSG00000170791.18	ENST00000521982.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	209.496157482661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAAGTGTTTATATA	0	True	NA	-8	True	NA	NA	NA	56211788	56217441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56216679_56216755_56217330
transcript_174023.known	chr8	-	1251	4	FSM	ENSG00000181195.11	ENST00000451791.7	1251	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCCTTGTAAGTCTCT	0	True	NA	NA	False	AATAAA	-19	NA	56446641	56440956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56441938_56445815_56445957_56446425_56446482_56446568
transcript_174024.known	chr8	-	7224	5	FSM	ENSG00000104331.9	ENST00000262644.9	7224	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	20.4022057631032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTGCTGCATCTGCT	-19	True	NA	-5	True	AATAAA	-19	NA	56993867	56957930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56964065_56966190_56966353_56978049_56978146_56980034_56980198_56993198
transcript_174026.known	chr8	+	578	4	FSM	ENSG00000169122.12	ENST00000519262.6	3349	4	-14	2785	-14	-38	multi-exon	FALSE	canonical	3	20	junction_3	5.31245915016974	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTGGCCTTTTTGTGC	-10	True	NA	NA	False	ATTAAA	-10	NA	57994508	58145999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_57994807_58031605_58031704_58075534_58075624_58145906
transcript_174027.known	chr8	+	4971	8	FSM	ENSG00000215114.10	ENST00000399598.7	4971	8	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_5	31.7753594690564	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGGTTTTTCAAATT	0	True	NA	13	True	AATAAA	-22	NA	58411360	58451501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58439632_58439771_58445906_58446069_58447388
transcript_174033.known	chr8	+	2073	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_4	95.6607776207156	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	11	True	NA	27	True	AATAAA	-19	NA	58553260	58582858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_174036.known	chr8	-	3371	31	FSM	ENSG00000035681.9	ENST00000427130.6	3371	31	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_30	26.659769941493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTAAGAAATTTTCCAAG	458	False	NA	NA	False	GATAAA	-34	NA	58659534	58583769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659194
transcript_174037.known	chr8	-	3574	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_30	19.9805738989983	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTTTTCACTTTAT	-44	True	NA	NA	False	ATTAAA	-17	NA	58659853	58583507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_174039.known	chr8	-	582	6	FSM	ENSG00000035681.9	ENST00000522645.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	10.3266645147405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAAAATTACCCAAGGG	9	True	NA	NA	False	AATATA	-39	NA	58659698	58631364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_174045.known	chr8	-	4076	9	FSM	ENSG00000198846.6	ENST00000361421.2	4076	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.3888811036348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGGTGATCCATCA	-10	True	NA	1	True	AATAAA	-44	NA	59119147	58805411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58807784_58808117_58808270_58815337_58815725_58826821_58826903_58838080_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_174048.nic	chr8	-	1038	5	ISM	ENSG00000198846.6	ENST00000361421.2	4076	9	-123	32838	-123	-32838	5prime_fragment	FALSE	canonical	3	71	junction_1	10.0124921972504	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGGATCCCA	-7	True	NA	NA	False	NA	NA	NA	59119270	58838249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_174049.known	chr8	+	3207	2	FSM	ENSG00000167912.7	ENST00000665670.1	3207	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATGCAATAAGTAATATC	1	True	NA	NA	False	TTTAAA	-14	NA	59119221	59123478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_59119286_59120335
transcript_174050.known	chr8	-	5735	9	FSM	ENSG00000178538.10	ENST00000317995.5	5735	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	6.14410286372225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGACTATTCATTTC	-3	True	NA	0	True	ATTAAA	-22	NA	60281400	60185411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_60189986_60208749_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_174055.known	chr8	-	1825	8	FSM	ENSG00000178538.10	ENST00000524872.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	5.32993088747932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTATTTATTTACC	12	False	NA	NA	False	AATAAA	-43	NA	60281385	60208070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_174058.known	chr8	+	3735	8	FSM	ENSG00000104388.15	ENST00000262646.12	3735	8	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_5	92.5511441621025	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGATGTACTAGGTATTA	13	True	NA	24	True	AATAAA	-34	NA	60516986	60623644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_17406.nic	chr1	+	4344	10	NIC	ENSG00000163362.11	novel	4298	10	NA	NA	-52	0	intron_retention	TRUE	canonical	3	48	junction_1	52.0130562906215	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	-18	True	NA	-1	True	AATAAA	-23	NA	200890995	200915735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_200891403_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_174063.known	chr8	+	680	7	FSM	ENSG00000104388.15	ENST00000529579.5	680	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	391.630211069348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTCTTGTATAACTTTG	-2	True	NA	-34	True	NA	NA	NA	60517180	60620895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60618579_60618649_60620673
transcript_174067.known	chr8	+	594	6	FSM	ENSG00000104388.15	ENST00000429861.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_5	96.2567400237511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTTCTGTCAGAC	53	False	NA	NA	False	CATAAA	-35	NA	60517235	60592117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857
transcript_174068.nic	chr8	+	655	5	ISM	ENSG00000104388.15	ENST00000429861.5	594	6	-330	7311	-30	0	5prime_fragment	FALSE	canonical	3	916	junction_4	83.3407913329361	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGGTAAAAAGGCT	NA	False	NA	-7	True	NA	NA	NA	60516905	60584806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722
transcript_174072.known	chr8	+	11606	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_14	32.4600333005063	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	-3	True	NA	23	True	AATAAA	-30	NA	60678739	60868028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
transcript_174075.nic	chr8	+	2134	3	NIC	ENSG00000171316.12	novel	434	3	NA	NA	58	0	intron_retention	FALSE	canonical	0	0	junction_1	58.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAAAAGAAAAACA	94	False	NA	NA	False	AATAGA	-19	NA	60679621	60781124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_60679792_60741258_60743098_60780999
transcript_174077.nnic	chr8	+	2349	3	NNC	ENSG00000171316.12	novel	434	3	NA	NA	290	0	intron_retention	FALSE	canonical	0	0	junction_1	58.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAAAAGAAAAACA	176	False	NA	NA	False	AATAGA	-19	NA	60679853	60781124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_60680239_60741258_60743098_60780999
transcript_174079.known	chr8	-	5301	25	FSM	ENSG00000198363.18	ENST00000379454.9	5301	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	132.465063528296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATTTCTAGTCTTCT	8466	False	61714610	-6	True	AATAAA	-19	NA	61714592	61500555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61503510_61517527_61517662_61518031_61518124_61525976_61526113_61548070_61548209_61553030_61553121_61555923_61556023_61562743_61562881_61567167_61567319_61576771_61576859_61583943_61584030_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_17409.known	chr1	+	4298	10	FSM	ENSG00000163362.11	ENST00000367342.8	4298	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	34.1807107540835	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	327	False	NA	-1	True	AATAAA	-23	NA	200891340	200915735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200891702_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_174090.known	chr8	-	2874	15	FSM	ENSG00000198363.18	ENST00000519234.5	2874	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	166.105649316012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	24	True	NA	-12	True	AATAAA	-17	NA	61714525	61624536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61682438_61682484_61684038_61684189_61714268
transcript_174093.nic	chr8	-	1243	14	ISM	ENSG00000198363.18	ENST00000379454.9	5301	25	-53	118429	-5	4725	5prime_fragment	FALSE	canonical	0	0	junction_11	124.685545301372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAGGTGAGATTGTCAA	8413	False	NA	NA	False	AATAGA	-25	NA	61714645	61618984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_174095.known	chr8	-	3730	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	115.168104558911	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	8462	False	61714610	NA	False	AATAAA	-20	NA	61714596	61623709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_17410.nnic	chr1	+	4016	10	NIC	ENSG00000163362.11	novel	4298	10	NA	NA	197	0	intron_retention	FALSE	canonical	3	14	junction_1	61.385444850601	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	-8	True	NA	-1	True	AATAAA	-23	NA	200891537	200915735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_200891702_200898391_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_174100.known	chr8	-	2744	13	FSM	ENSG00000198363.18	ENST00000518068.5	2744	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	148.273583471755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATTGTCATTATTTTT	-19	True	NA	-14	True	AATAAA	-15	NA	61714568	61624538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_174101.known	chr8	-	3717	13	FSM	ENSG00000198363.18	ENST00000445642.6	3717	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	150.10947394041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	8418	False	NA	NA	False	AATAAA	-20	NA	61714640	61623709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_17411.known	chr1	+	4132	10	FSM	ENSG00000163362.11	ENST00000413687.3	4132	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	62.5157757867742	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGGATTTTTTATTTT	-14	True	NA	6	True	AATAAA	-30	NA	200894899	200915742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200895088_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_174111.known	chr8	-	6337	4	FSM	ENSG00000198363.18	ENST00000517856.5	6337	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	198.005050440639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGACTGAATTGAGCTT	8471	False	61714610	-9	True	AATAAA	-20	NA	61714587	61656127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61661927_61680967_61681037_61684038_61684189_61714268
transcript_174114.known	chr8	+	2627	3	FSM	ENSG00000185942.13	ENST00000676150.1	2627	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTCGTAGAGAATAATCT	NA	False	NA	NA	False	AATAAA	-2	NA	62579538	62636595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_62579677_62589713_62589795_62634187
transcript_174115.known	chr8	-	1248	9	FSM	ENSG00000137563.13	ENST00000260118.7	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	38.7151052562175	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTCTAATTGATTTG	25	True	NA	-15	True	AATAAA	-17	NA	63038806	63015078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_174117.known	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	161.515779225361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	30	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_174118.known	chr8	-	718	1	FSM	ENSG00000270673.1	ENST00000603538.1	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTCCATGGAAGGAA	226	False	NA	NA	False	AATAAA	-25	NA	63168442	63167724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_63167700_63168400
transcript_174119.known	chr8	+	5095	5	FSM	ENSG00000185728.17	ENST00000539294.6	5095	5	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	37.6397396377818	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	-5	True	NA	12	True	AATAAA	-14	NA	63168620	63212786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_63168902_63169386_63169412_63175330_63175417_63186146_63187746_63209682
transcript_174120.known	chr8	-	3000	7	FSM	ENSG00000104442.10	ENST00000276569.8	3000	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	9.81070843517429	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTGTGGTATAAGCAT	-12	True	NA	-18	True	AATAAA	-32	NA	65634177	65602457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65613243_65613434_65622262_65622355_65627215_65627434_65633997
transcript_174132.known	chr8	+	2651	8	FSM	ENSG00000066855.16	ENST00000262146.9	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	16.6451561870052	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	10	True	NA	16	True	AATAAA	-29	NA	65644733	65710562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
transcript_174137.known	chr8	+	1720	1	FSM	ENSG00000179041.4	ENST00000320270.4	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACTGGGTAGA	-47	True	NA	34	True	AATAAA	-27	NA	66429013	66430733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66429000_66430700
transcript_174138.known	chr8	-	9956	3	FSM	ENSG00000175073.8	ENST00000310421.5	9956	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTTAATTGATTTT	-8	True	NA	2	True	ATTAAA	-22	NA	66667231	66628486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66635373_66651457_66651545_66664248
transcript_174143.nic	chr8	+	924	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-62	0	-25	0	intron_retention	FALSE	canonical	3	19	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	-9	True	NA	6	True	AATAAA	-15	NA	66667589	66678295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_66667702_66676744_66676903_66677641
transcript_174144.known	chr8	+	1835	3	FSM	ENSG00000288596.2	ENST00000661636.1	1835	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTATATTACAAAGAAT	19	True	NA	NA	False	AAAAAG	-9	NA	66667617	66681158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66667702_66677641_66677955_66679720
transcript_174145.known	chr8	+	598	4	FSM	ENSG00000288596.2	ENST00000521889.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	12.2565175405668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	53	False	NA	6	True	AATAAA	-15	NA	66667651	66678295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66667702_66676744_66676903_66677641_66677955_66678218
transcript_174146.known	chr8	+	575	3	FSM	ENSG00000288596.2	ENST00000521113.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	16	True	NA	18	True	AATAAA	-19	NA	66667614	66685564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66667702_66679720_66680025_66685380
transcript_174148.known	chr8	+	4106	17	FSM	ENSG00000104205.16	ENST00000521198.7	4106	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	16.593955978006	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGTCATTATTTG	11	True	NA	6	True	AATAAA	-18	NA	66712780	66862022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66712834_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_174150.known	chr8	+	4190	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	9.06831709855803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	-40	True	NA	4	True	AATAAA	-16	NA	66775180	66862020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_174157.known	chr8	-	638	4	FSM	ENSG00000245910.9	ENST00000520944.6	639	4	1	0	1	0	multi-exon	FALSE	canonical	3	693	junction_3	105.738671576045	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGGAGACATTGCTT	NA	False	NA	94	True	NA	NA	NA	66925596	66921817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66925436
transcript_174159.known	chr8	-	648	3	FSM	ENSG00000245910.9	ENST00000686474.1	1806	3	35	1123	0	134	multi-exon	FALSE	canonical	3	45	junction_1	324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCACCTTTTTTATTCA	-3	True	NA	NA	False	GATAAA	-1	NA	66925541	66921683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922115_66922613_66922726_66925436
transcript_174160.known	chr8	-	302	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	60	0	-1	multi-exon	FALSE	canonical	3	197	junction_2	312	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGCTAACTTTTAAT	-3	True	NA	-75	True	AATAAA	-17	NA	66925541	66921986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922115_66922323_66922393_66925436
transcript_174164.known	chr8	-	560	2	FSM	ENSG00000245910.9	ENST00000521127.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGGTGGGGGCAG	-3	True	NA	NA	False	NA	NA	NA	66925541	66922270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922726_66925436
transcript_174166.known	chr8	+	4476	30	FSM	ENSG00000104218.16	ENST00000262210.11	4476	30	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	17.1753217313535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAACTACTATGGAG	4956	False	NA	8	True	AATAAA	-22	NA	67064339	67196263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_174168.known	chr8	+	2489	19	FSM	ENSG00000104218.16	ENST00000678362.1	2489	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	15.1029389667077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAAGAAGAAGAA	14	True	NA	NA	False	AAAAAG	-10	NA	67064398	67159051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112076_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990
transcript_174173.known	chr8	+	4348	29	FSM	ENSG00000104218.16	ENST00000675869.1	4348	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	19.9219138905183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTAAAATCTTTTTAA	4962	False	NA	-3	True	AATAAA	-11	NA	67064345	67196252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_174175.known	chr8	+	1991	15	FSM	ENSG00000104218.16	ENST00000678728.1	1991	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	16.2971451112	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTTATTTCTACTGACT	-7	True	NA	NA	False	NA	NA	NA	67064377	67137603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112076_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455
transcript_174176.known	chr8	+	4302	18	FSM	ENSG00000104218.16	ENST00000678156.1	4302	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	20.2281109001369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATAATTGTTCCTATG	4952	False	NA	NA	False	TATAAA	-3	NA	67064335	67166342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390
transcript_174177.known	chr8	+	4291	28	FSM	ENSG00000104218.16	ENST00000675306.2	4291	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	17.0887299515799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAATTACTAAAATCT	4932	False	NA	-9	True	AATAAA	-5	NA	67064315	67196246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_174180.known	chr8	+	4399	24	FSM	ENSG00000104218.16	ENST00000677619.1	4399	24	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_6	16.5210526173159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGTGGAGCACTTACC	-23	True	NA	NA	False	ATTAAA	-15	NA	67064361	67196778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_174182.known	chr8	+	682	4	FSM	ENSG00000104218.16	ENST00000677071.1	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	17.1723291631883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGTGGATTCTAATTT	6	True	NA	NA	False	NA	NA	NA	67064390	67086331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006
transcript_174185.nic	chr8	-	1433	9	NIC	ENSG00000121022.14	novel	1451	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	201.007112747286	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	67062351	67043078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853_67062025_67062105
transcript_174186.known	chr8	-	1296	8	FSM	ENSG00000121022.14	ENST00000357849.9	1296	8	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	26.1080955464244	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	5	True	NA	NA	False	AATAAA	-17	NA	67062133	67043078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853
transcript_17419.nnic	chr1	+	2518	2	NNC	ENSG00000229191.1	novel	2497	2	NA	NA	-78	25	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTGAATGAAATAGCAAAA	4194	False	NA	NA	False	NA	NA	NA	201023870	201027815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_201024077_201025503
transcript_174192.known	chr8	-	7320	39	FSM	ENSG00000066777.9	ENST00000262215.8	7320	39	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_29	41.0610399621111	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	2	True	NA	-14	True	AATAAA	-33	NA	67343781	67197657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_174194.nic	chr8	-	3151	18	ISM	ENSG00000066777.9	ENST00000262215.8	7320	39	-15	55849	-15	45807	5prime_fragment	FALSE	canonical	3	160	junction_8	23.9826927214817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATATCAATGAAAGAAACAA	140	False	67343808	NA	False	AATGAA	-15	NA	67343796	67253506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_174196.nic	chr8	-	2607	14	ISM	ENSG00000066777.9	ENST00000262215.8	7320	39	-12	68370	-12	33286	5prime_fragment	FALSE	canonical	3	160	junction_4	10.3117098944232	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGAACAAGGGATAGAT	-10	True	NA	NA	False	AAAAAG	-4	NA	67343793	67266027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_174199.known	chr8	+	550	2	FSM	ENSG00000255130.1	ENST00000526382.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGCAGTCTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	67732586	67735665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67732666_67735194
transcript_17420.known	chr1	+	2497	2	FSM	ENSG00000229191.1	ENST00000446333.1	2497	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	201023948	201027790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201024077_201025421
transcript_174200.nnic	chr8	+	2957	19	NNC	ENSG00000046889.19	novel	3612	24	NA	NA	65	-20616	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_18	15.8823801742686	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTATTCTAATGTATG	0	True	NA	4	True	AATAAA	-15	NA	67952110	68085391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_67952536_68017845_68017918_68019548_68019672_68022035_68022141_68027221_68027324_68030496_68030659_68038158_68038293_68044486_68044591_68053096_68053247_68055829_68055975_68060678_68060780_68069032_68069137_68069834_68069885_68072494_68072571_68077396_68077470_68080442_68080586_68080745_68080839_68083239_68083389_68084745
transcript_174205.known	chr8	+	5710	23	FSM	ENSG00000137573.14	ENST00000260128.8	5710	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.86118847316909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTCAGAGAAATGA	-1	True	NA	NA	False	AATAAA	-16	NA	69466623	69660912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_69466951_69495764_69495927_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599_69603657_69604802_69604933_69621034_69621252_69623941_69624198_69627209_69627307_69627771_69627867_69628170_69628237_69629503_69629680_69638501_69638645_69638734_69638859_69640807_69640842_69658504
transcript_174207.known	chr8	+	5551	22	FSM	ENSG00000137573.14	ENST00000458141.6	5551	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_18	7.73923068592592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTTCAGAGAAATGAACT	-1	True	NA	NA	False	AATAAA	-19	NA	69466623	69660915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599_69603657_69604802_69604933_69621034_69621252_69623941_69624198_69627209_69627307_69627771_69627867_69628170_69628237_69629503_69629680_69638501_69638645_69638734_69638859_69640807_69640842_69658504
transcript_17421.known	chr1	+	3496	2	FSM	ENSG00000229191.1	ENST00000458003.1	3496	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTACAAGTTGTGTG	6	True	NA	8	True	AATAAA	-18	NA	201023960	201028792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201024086_201025421
transcript_174210.nic	chr8	-	1878	4	ISM	ENSG00000137571.11	ENST00000260126.9	8991	10	-108	88487	-108	5832	5prime_fragment	FALSE	canonical	1	1	junction_3	2.44948974278318	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTGATGCTGTTAG	NA	False	NA	NA	False	AAAAAG	-37	NA	69835086	69755532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_69755642_69761742_69761876_69831766_69833170_69834853
transcript_174211.nic	chr8	-	1894	3	ISM	ENSG00000137571.11	ENST00000532388.5	2261	5	591	50641	-28	5832	internal_fragment	FALSE	canonical	1	4	junction_1	1.5	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTGATGCTGTTAG	1560	False	NA	NA	False	AAAAAG	-37	NA	69833418	69755532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_69755642_69761742_69761876_69831766
transcript_174218.known	chr8	-	2269	8	FSM	ENSG00000147596.4	ENST00000276594.3	2269	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	33.5297613764128	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTCCAACACTTTGGGA	-3	True	NA	NA	False	NA	NA	NA	70071252	70051650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70069160_70069885_70071149
transcript_17422.known	chr1	-	2036	2	FSM	ENSG00000232237.5	ENST00000449188.3	2036	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTGTCTACCCTCACC	NA	False	NA	-1	True	AATAAA	-27	NA	201127184	201113942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201115878_201127083
transcript_174226.nnic	chr8	-	1542	7	NIC	ENSG00000147596.4	novel	2269	8	NA	NA	-113	-116	combination_of_known_splicesites	FALSE	canonical	3	45	junction_6	91.6468160324672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGCCCTCAAGAGTGT	6666	False	NA	0	True	AAAACA	-18	NA	70071365	70051766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70071149
transcript_174229.known	chr8	-	8430	23	FSM	ENSG00000140396.13	ENST00000452400.7	8430	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	12.6361183756447	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	1	True	NA	-19	True	AATAAA	-22	NA	70403808	70109781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70144641_70144849_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403699
transcript_174232.known	chr8	-	3056	11	FSM	ENSG00000067167.8	ENST00000262213.7	3056	11	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	67.9694784443724	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGTGTCTCTTTATT	-1	True	NA	NA	False	AATAAA	-26	NA	70608416	70573217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_174238.nic	chr8	-	770	6	ISM	ENSG00000067167.8	ENST00000262213.7	3056	11	22	21283	-7	0	5prime_fragment	FALSE	canonical	3	945	junction_2	67.8350941622402	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATTTTGTAGTGTTAA	180	False	NA	NA	False	AAAAAG	-5	NA	70608394	70594500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_174239.known	chr8	-	1526	7	FSM	ENSG00000147592.9	ENST00000276590.5	1526	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	33.304987948087	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGATAAATAATTATT	-3	True	NA	94	True	ATTAAA	-17	NA	70669185	70637265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_174242.known	chr8	-	1034	8	FSM	ENSG00000147592.9	ENST00000522447.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.6647650972917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCAAGCAATTCTCCTG	8	True	NA	NA	False	NA	NA	NA	70669174	70635317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70635386_70637814_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_174246.nnic	chr8	+	612	4	NIC	ENSG00000254277.2	novel	473	3	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	35.3679076125361	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAAACAACAAAAATGTT	-3	True	NA	NA	False	AGTAAA	-16	NA	71675282	71702436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_71675536_71695940_71696034_71697626_71697671_71702214
transcript_174249.nnic	chr8	+	535	3	FSM	ENSG00000254277.2	ENST00000693596.1	452	3	-82	-1	-33	1	multi-exon	FALSE	canonical	3	73	junction_1	36	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAAACAACAAAAATGTT	NA	False	NA	NA	False	AGTAAA	-16	NA	71675266	71702436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_71675536_71697626_71697671_71702214
transcript_174256.known	chr8	+	473	3	FSM	ENSG00000254277.2	ENST00000521131.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	50.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAAACAACAAAAATGT	23	False	NA	NA	False	AGTAAA	-15	NA	71675376	71702435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_71675536_71695940_71696034_71702214
transcript_174259.known	chr8	+	808	2	FSM	ENSG00000254277.2	ENST00000519840.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTGTGTTTTCAGT	14	False	NA	NA	False	NA	NA	NA	71675299	71702786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_71675536_71702214
transcript_17426.known	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	535.26643832768	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	50	False	NA	-81	True	NA	NA	NA	201154433	201135598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
transcript_174263.known	chr8	-	1956	2	FSM	ENSG00000178860.9	ENST00000325509.5	1956	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTTGGAGGTGTCAGG	3	True	NA	-17	True	AATAAA	-43	NA	71844412	71841559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_71842748_71843644
transcript_174264.known	chr8	-	5191	27	FSM	ENSG00000104321.11	ENST00000262209.5	5191	27	0	0	0	0	multi-exon	FALSE	canonical	2	73	junction_20	15.7651026491571	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCACCAACCTGTACT	-1	True	NA	-32	True	AATAAA	-16	NA	72075584	72021249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_72023117_72023813_72023912_72025959_72026074_72029900_72029970_72033643_72033827_72034247_72034378_72036287_72036458_72037982_72038073_72038864_72039028_72039726_72039798_72046512_72046609_72047147_72047208_72050777_72050872_72052598_72052766_72053752_72053868_72055435_72055601_72055685_72055856_72056916_72057018_72057716_72057817_72059389_72059439_72061624_72061762_72062798_72062945_72063462_72063572_72065450_72065559_72069022_72069199_72071710_72071868_72075298
transcript_174273.known	chr8	+	2764	11	FSM	ENSG00000147601.15	ENST00000679115.1	2764	11	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_9	3471.85651921274	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	-11	True	NA	-22	True	AATAAA	-7	NA	73008859	73047479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73039544_73039620_73045960
transcript_174277.known	chr8	+	3329	10	FSM	ENSG00000147601.15	ENST00000276603.10	3329	10	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_7	2548.68935574714	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCAGTCTGAGTATT	-7	True	NA	3	True	AATATA	-15	NA	73008863	73048123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
transcript_174280.known	chr8	+	2715	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	3285.44899688172	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	-7	True	NA	-22	True	AATAAA	-7	NA	73008863	73047479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
transcript_174284.known	chr8	+	2933	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	3317.8160152593	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCTATATATAAACAGAA	-7	True	NA	-13	True	NA	NA	NA	73008863	73047711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_17429.known	chr1	-	507	6	FSM	ENSG00000116857.17	ENST00000435310.5	507	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	552.361620679786	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	65	False	NA	NA	False	NA	NA	NA	201154418	201135800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154361
transcript_174293.known	chr8	+	3268	9	FSM	ENSG00000147601.15	ENST00000276602.10	3268	9	0	0	0	0	multi-exon	FALSE	canonical	3	5990	junction_6	809.648756792104	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	-7	True	NA	2	True	AATATA	-14	NA	73008863	73048122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_1743.known	chr1	+	840	7	FSM	ENSG00000157870.17	ENST00000493183.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	161.324466009757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTTGCTCACTGTTGG	869	False	NA	NA	False	NA	NA	NA	2586490	2589632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586592_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_17430.known	chr1	-	1544	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	547.477341996909	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-18	True	NA	-4	True	ATTAAA	-17	NA	201154501	201134772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
transcript_174301.nic	chr8	+	1097	8	ISM	ENSG00000147601.15	ENST00000677031.1	1934	10	-56	10666	-48	3635	5prime_fragment	FALSE	canonical	3	2122	junction_7	2775.75332668669	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGTAGGAACTCCTCAA	2373	False	NA	4	True	AAGAAA	-5	NA	73008807	73032112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041
transcript_17431.known	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	566.280990321943	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	35	False	NA	-3	True	ATTAAA	-18	NA	201171574	201134771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
transcript_174312.nic	chr8	+	1070	7	ISM	ENSG00000147601.15	ENST00000678860.1	2715	10	-66	15344	-58	3658	5prime_fragment	FALSE	canonical	3	5990	junction_6	916.328483071922	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTGTTATAACAGTTT	2363	False	NA	27	True	AAGAAA	-28	NA	73008797	73032135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041
transcript_174318.known	chr8	+	2331	6	FSM	ENSG00000147601.15	ENST00000522018.2	2331	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_5	3316.29190512536	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCACTCCCAGCTTAAAA	-7	True	NA	NA	False	AATAAA	-8	NA	73008863	73028477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026943
transcript_174326.known	chr8	+	4052	4	FSM	ENSG00000147601.15	ENST00000678358.1	4052	4	0	0	0	0	multi-exon	FALSE	canonical	3	8043	junction_1	360.674676436012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGATTGCGCCACT	-15	True	NA	NA	False	NA	NA	NA	73008855	73025699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215
transcript_17433.known	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_4	67.0125921002911	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	9	True	NA	-3	True	ATTAAA	-18	NA	201154474	201134771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
transcript_174336.known	chr8	+	3598	1	FSM	ENSG00000147601.15	ENST00000518695.2	3598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATACAAAAAAAATT	-1	True	NA	NA	False	NA	NA	NA	73008907	73012505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73008900_73012500
transcript_174337.known	chr8	-	3698	5	FSM	ENSG00000164764.11	ENST00000297354.7	3698	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.1650635094611	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCTAGTGAAGGTTC	-15	True	NA	NA	False	AATAAA	-20	NA	73093172	73064542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73067459_73069804_73069982_73071779_73071871_73081018_73081214_73092853
transcript_17434.known	chr1	-	1330	16	FSM	ENSG00000118194.21	ENST00000509001.5	1330	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	33.3843609427462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCACCACACACTGA	8611	False	NA	-34	True	NA	NA	NA	201377762	201359033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373402_201377622
transcript_174343.nnic	chr8	-	1058	7	NNC	ENSG00000147604.14	novel	1233	7	NA	NA	0	-357	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	11445.2075329468	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTGTATTTGTGAT	-6	True	NA	-25	True	AATAAA	-24	NA	73293633	73290640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293374
transcript_174344.known	chr8	-	1233	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	0	0	0	multi-exon	FALSE	canonical	3	19042	junction_1	4694.5917968327	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTCTTGTTTTGC	-6	True	NA	1	True	TATAAA	-38	NA	73293633	73290241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
transcript_174345.nic	chr8	-	1420	7	NIC	ENSG00000147604.14	novel	1233	7	NA	NA	-48	-357	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	11438.0258737637	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTGTATTTGTGAT	-17	True	NA	-25	True	AATAAA	-24	NA	73294486	73290640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293865
transcript_174348.known	chr8	+	3959	6	FSM	ENSG00000121039.10	ENST00000240285.10	3959	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	8.50881895447306	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGTAGAAGTCTTTC	-1	True	NA	5	True	AATAAA	-14	NA	73294601	73325281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73295579_73297193_73297430_73319095_73319195_73320931_73321078_73322678_73322811_73322912
transcript_17435.known	chr1	-	1156	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	28.9654199961878	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	0	True	NA	-14	True	AATAAA	-18	NA	201377680	201359013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_174353.known	chr8	-	2970	15	FSM	ENSG00000040341.18	ENST00000524300.6	2970	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	161.581027882077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	0	True	NA	0	True	AGTAAA	-24	NA	73746840	73420368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_174355.known	chr8	-	1950	14	FSM	ENSG00000040341.18	ENST00000521210.5	1950	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	209.522364681614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAACTGGGGAAAAATAAA	0	True	NA	-45	True	AATATA	-15	NA	73746840	73421211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73421466_73422613_73422703_73527690_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73738283_73738350_73739755_73739869_73746782
transcript_174356.nic	chr8	-	2926	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	115.76859187148	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	657	False	NA	0	True	AGTAAA	-24	NA	73746927	73420368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_174361.nic	chr8	-	2710	13	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	-24	534	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	123.179718523609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	657	False	NA	-3	True	AATAAA	-17	NA	73746927	73526834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_174369.known	chr8	-	4061	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_9	30.2559330975481	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	0	True	NA	-20	True	AGTAAA	-23	NA	73746840	73549603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_174378.known	chr8	-	1603	10	FSM	ENSG00000040341.18	ENST00000523558.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_9	189.436656731426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGATCCTGCTACTGG	0	True	NA	37	True	NA	NA	NA	73746840	73421129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73746782
transcript_174379.known	chr8	-	1695	10	FSM	ENSG00000040341.18	ENST00000517542.5	1695	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	156.517738512719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATCTATCTAGTAAT	705	False	NA	NA	False	AAAAAG	-29	NA	73746879	73551829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73746782
transcript_17438.known	chr1	-	2308	15	FSM	ENSG00000118194.21	ENST00000491504.5	2308	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.7031029190185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCACGTCCCCTTCA	0	True	NA	-8	True	AATAAA	-24	NA	201377680	201359007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_174384.known	chr8	-	1041	7	FSM	ENSG00000040341.18	ENST00000522962.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	205.695905539113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTACAGTTAACCA	766	False	NA	NA	False	AGTAAA	-8	NA	73746818	73653497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_174387.known	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	174.966968311164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	0	True	NA	NA	False	ATTAAA	-29	NA	73746840	73652256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_17439.known	chr1	-	1108	15	FSM	ENSG00000118194.21	ENST00000412633.3	1108	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	27.2205654546975	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGCATTTCTGTCAC	8707	False	NA	-18	True	AATAAA	-14	NA	201377666	201359017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_174390.known	chr8	-	2268	7	FSM	ENSG00000104343.21	ENST00000651945.1	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	130.967871378187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAATTAAAAC	-12	True	NA	-34	True	NA	NA	NA	73878862	73792362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73870268_73870302_73878807
transcript_174391.known	chr8	-	8426	6	FSM	ENSG00000104343.21	ENST00000517608.5	8426	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	33.8762453645619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTTGGCTTTTTTTA	NA	False	NA	-1	True	AATAAA	-17	NA	73878910	73786219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_174394.known	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	110.141670134423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-25	True	NA	-22	True	AATAAA	-24	NA	73878875	73790604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
transcript_174395.known	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1812.34544168599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	385	False	NA	45	True	NA	NA	NA	73971908	73946533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
transcript_174397.known	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	1786.51201717201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	1	True	NA	-121	True	NA	NA	NA	73972252	73946699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
transcript_1744.known	chr1	+	785	7	FSM	ENSG00000157870.17	ENST00000474659.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	166.065917300598	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGCAGGGTGGCTGT	18	False	NA	NA	False	NA	NA	NA	2586539	2589658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586592_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_174403.known	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1873.80401856758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-3	True	NA	-82	True	NA	NA	NA	73972232	73946472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
transcript_174405.known	chr8	-	1976	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-28	0	-19	multi-exon	FALSE	canonical	3	9	junction_4	1882.54978353827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	385	False	NA	NA	False	NA	NA	NA	73971908	73945137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
transcript_174415.known	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	1743.06250286353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	187	False	NA	-10	True	AATAAA	-13	NA	73972106	73946400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
transcript_174416.known	chr8	-	2015	4	FSM	ENSG00000154582.18	ENST00000520242.6	2015	4	0	0	0	0	multi-exon	FALSE	canonical	3	2603	junction_3	572.278681141355	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-9	True	NA	NA	False	NA	NA	NA	73972191	73945118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972076
transcript_174417.known	chr8	-	1943	4	FSM	ENSG00000154582.18	ENST00000518127.5	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_3	1487.21372595423	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	6	True	NA	NA	False	NA	NA	NA	73972287	73945118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972244
transcript_174418.known	chr8	-	814	4	ISM	ENSG00000154582.18	ENST00000622804.2	1992	5	1315	1098	1271	137	3prime_fragment	FALSE	canonical	3	31	junction_3	1771.7179986292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAGAAACCTAATCT	1656	False	NA	NA	False	NA	NA	NA	73970637	73946263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578
transcript_17443.known	chr1	-	2627	10	FSM	ENSG00000159166.15	ENST00000391967.7	2627	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_6	23.5613200493762	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGATTGACTGCCCTA	-7	True	NA	-7	True	TTTAAA	-15	NA	201399324	201380832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399268
transcript_174430.known	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	1926.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	12	True	NA	7	True	AATAAA	-37	NA	73972170	73945607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73972076
transcript_174436.known	chr8	+	928	4	FSM	ENSG00000175606.11	ENST00000416961.6	928	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	153.486155727479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAAGAGAAACGGCAT	-22	True	NA	NA	False	AAGAAA	-1	NA	73976194	73981586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73976492_73978755_73978862_73979078_73979172_73981154
transcript_174439.known	chr8	+	617	3	FSM	ENSG00000175606.11	ENST00000517439.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	184	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACTTATAAAGCCATTAC	-10	True	NA	NA	False	NA	NA	NA	73976206	73981366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73976492_73978755_73978876_73981154
transcript_17444.known	chr1	-	2336	10	FSM	ENSG00000159166.15	ENST00000367313.4	2336	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	75.0510937073316	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGAGACCTTAGAAGCG	3	True	NA	-13	True	GATAAA	-26	NA	201399548	201381206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399409
transcript_174443.known	chr8	+	3500	6	FSM	ENSG00000104381.14	ENST00000675625.1	3500	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	71.0194339600084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTACTCACTTTG	-32	True	NA	5	True	AATAAA	-28	NA	74350394	74366868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_174444.known	chr8	+	3645	6	FSM	ENSG00000104381.14	ENST00000220822.12	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	33.6428298453028	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCACTTTGTAATCTTT	-24	True	NA	13	True	AATAAA	-36	NA	74350402	74366876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_174446.known	chr8	+	945	6	FSM	ENSG00000104381.14	ENST00000676207.1	945	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	72.2595322431581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	-14	True	NA	NA	False	AATAAA	-25	NA	74350412	74488879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74488677
transcript_174447.known	chr8	+	4456	5	FSM	ENSG00000104381.14	ENST00000674926.1	4456	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	79.3867117343954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAACAAAGTACTCACT	-31	True	NA	2	True	AATAAA	-25	NA	74350395	74366865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74363054_74363984
transcript_174448.known	chr8	+	2378	5	FSM	ENSG00000104381.14	ENST00000675928.1	2378	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	87.086164228309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCCCGATTTACAAAAAA	-32	True	NA	NA	False	NA	NA	NA	74350394	74365775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351467_74361883_74361979_74362938_74363054_74363984
transcript_174450.known	chr8	-	4590	6	FSM	ENSG00000104369.5	ENST00000342232.5	4590	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30.7024428995479	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGGTGTGTTTTCTTT	1	True	NA	NA	False	AATAAA	-22	NA	74321540	74234699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_74237036_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_174452.nnic	chr8	-	4233	6	NNC	ENSG00000104369.5	novel	4590	6	NA	NA	-73	-4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	33.8549848619077	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGGAGGTGTGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	74321613	74234703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_74236610_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_174454.nnic	chr8	-	4379	6	NNC	ENSG00000104369.5	novel	4590	6	NA	NA	-73	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	24.0449578914167	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGGAGGTGTGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	74321613	74234703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_74236756_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_174455.nic	chr8	-	4828	5	NIC	ENSG00000104369.5	novel	4590	6	NA	NA	-73	-7	intron_retention	FALSE	canonical	3	90	junction_1	6.18465843842649	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAAGTTGGAGGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	74321613	74234706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_174456.nic	chr8	-	1332	2	ISM	ENSG00000104369.5	ENST00000342232.5	4590	6	-73	80294	-73	-77761	5prime_fragment	FALSE	canonical	3	105	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCCGTGGGATAAGGAAG	NA	False	NA	-43	True	AATACA	-13	NA	74321613	74314993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_74315621_74320908
transcript_174458.known	chr8	+	4297	15	FSM	ENSG00000121005.9	ENST00000262207.9	4297	15	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	38.0053701898206	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCATTGTAATTATTT	0	True	NA	30	True	ATTAAA	-27	NA	74984504	75034558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564_75016706_75016880_75016942_75017046_75017114_75017319_75017451_75019869_75019914_75020006_75020080_75025545_75025622_75029386_75029518_75032190
transcript_174461.known	chr8	-	1627	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	88.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATTCTAAAGATAAAG	649	False	NA	-38	True	AAAACA	-3	NA	77000267	76982956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_76984196_76986186_76986297_76999989
transcript_174465.known	chr8	-	4169	4	FSM	ENSG00000164751.15	ENST00000357039.9	4169	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	21.3124898175277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTATTATTTTGATAG	25	True	NA	NA	False	AATAAA	-23	NA	77000078	76980257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_76984196_76986186_76986297_76988306_76988339_76999989
transcript_174468.known	chr8	+	3962	4	FSM	ENSG00000171033.13	ENST00000396418.7	3962	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	60.0351748745868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	2	True	NA	10	True	ATTAAA	-25	NA	78516339	78605267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_78516469_78572810_78572940_78598357_78598536_78601741
transcript_174471.known	chr8	+	1736	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	17	True	NA	-17	True	NA	NA	NA	78516354	78603185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_78516469_78598357_78598536_78601741
transcript_174477.known	chr8	+	3310	9	FSM	ENSG00000104427.12	ENST00000263849.9	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	21.0531321897717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTTCGTATTCACTGA	11	True	NA	13	True	AATAAA	-18	NA	78666088	78719765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220_78715329_78717327
transcript_174482.nic	chr8	+	877	8	ISM	ENSG00000104427.12	ENST00000263849.9	3310	9	-30	4462	-30	-2199	5prime_fragment	FALSE	canonical	3	87	junction_7	22.459032999337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACTGAGAGCTACATA	-19	True	NA	NA	False	AAGAAA	-36	NA	78666058	78715303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220
transcript_174484.known	chr8	+	1903	5	FSM	ENSG00000104435.14	ENST00000220876.12	1903	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	5.59016994374947	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTGGTCTGTTCTC	0	True	NA	13	True	AATAAA	-23	NA	79611116	79666158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_174486.known	chr8	-	2296	5	FSM	ENSG00000164683.18	ENST00000337919.9	2296	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGTGGTGTATGTCT	-3	True	NA	NA	False	AATAAA	-15	NA	79767857	79764012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79765772_79766650_79766733_79766996_79767093_79767218_79767295_79767574
transcript_174487.known	chr8	-	2197	5	FSM	ENSG00000164683.18	ENST00000354724.8	2197	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.9474565306379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGGTGTATGTCTTAC	0	True	NA	NA	False	AATAAA	-18	NA	79767767	79764009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79765772_79766650_79766733_79767008_79767093_79767218_79767295_79767574
transcript_174488.known	chr8	+	571	3	FSM	ENSG00000272138.3	ENST00000607754.3	618	3	0	47	0	-43	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTGTGGATGTATTAT	-15	True	NA	NA	False	ATTAAA	-14	NA	79783638	79802799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_79783767_79800560_79800691_79802486
transcript_174490.nnic	chr8	-	809	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_2	182.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	NA	False	NA	0	True	AATAAA	-21	NA	80030290	79918716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_79919149_80002998_80003121_80030035
transcript_174491.known	chr8	-	403	3	FSM	ENSG00000147586.10	ENST00000519120.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	174.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAATGAACTTTGCT	-24	True	NA	NA	False	AGTAAA	-29	NA	80029964	79918987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80002998_80003181_80029904
transcript_174492.nnic	chr8	-	884	3	NNC	ENSG00000147586.10	novel	838	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	164.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	NA	False	NA	0	True	AATAAA	-21	NA	80030290	79918716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_79919149_80002998_80003181_80030020
transcript_174493.known	chr8	-	838	3	FSM	ENSG00000147586.10	ENST00000276585.9	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	98	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	4	True	NA	0	True	AATAAA	-21	NA	80030259	79918716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80002998_80003181_80030035
transcript_174494.nnic	chr8	-	843	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_2	141.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	NA	False	NA	0	True	AATAAA	-21	NA	80030282	79918716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_79919149_80002998_80003181_80030053
transcript_174495.nnic	chr8	-	671	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_2	182.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	NA	False	NA	-5	True	AATAAA	-23	NA	80030290	79918854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_79919149_80002998_80003121_80030035
transcript_174496.known	chr8	-	555	3	FSM	ENSG00000147586.10	ENST00000519386.5	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	203.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	-1	True	NA	-5	True	AATAAA	-23	NA	80029839	79918854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80002998_80003181_80029760
transcript_174498.nnic	chr8	-	746	3	NNC	ENSG00000147586.10	novel	555	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	164.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	NA	False	NA	-5	True	AATAAA	-23	NA	80030290	79918854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_79919149_80002998_80003181_80030020
transcript_174500.nnic	chr8	-	705	3	NIC	ENSG00000147586.10	novel	555	3	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_2	141.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	NA	False	NA	-5	True	AATAAA	-23	NA	80030282	79918854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_79919149_80002998_80003181_80030053
transcript_174501.known	chr8	-	437	2	FSM	ENSG00000147586.10	ENST00000521605.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTGACTCCTTTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	80030289	79918965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80030035
transcript_174503.known	chr8	-	487	3	FSM	ENSG00000147586.10	ENST00000522987.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATCATATATTGTATG	9	True	NA	NA	False	AATGAA	-14	NA	80030254	79958271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79958436_80002998_80003121_80030053
transcript_174506.known	chr8	-	4041	6	FSM	ENSG00000076554.16	ENST00000379096.9	4041	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	340.64961470696	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGATCTTTCACTTT	-21	True	NA	0	True	AATACA	-23	NA	80171558	80034744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
transcript_174509.known	chr8	+	676	4	FSM	ENSG00000164687.11	ENST00000297258.11	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	1614	junction_2	108.369737473153	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTGTATGCATTCTT	0	True	NA	NA	False	AATAAA	-19	NA	81280535	81284775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_81280675_81283365_81283539_81283872_81283975_81284513
transcript_174510.known	chr8	-	1180	10	FSM	ENSG00000133731.10	ENST00000449740.6	1180	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	85.8082847305262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAAATTCTCTTTGTCC	22	True	NA	NA	False	NA	NA	NA	81686283	81659261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81685762_81685964_81686251
transcript_174511.known	chr8	-	3369	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	22.2696542406926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATTGTGTTCATTCTAT	-20	True	NA	NA	False	CATAAA	-44	NA	81686325	81656913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_174514.known	chr8	-	1106	8	FSM	ENSG00000133731.10	ENST00000311489.8	1106	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	77.4111735857193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAAATTTTGACTTAG	4	True	NA	NA	False	NA	NA	NA	81686301	81659043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81659467_81660515_81660668_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_174516.known	chr8	-	2184	8	FSM	ENSG00000104231.11	ENST00000220669.10	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	40.5814876865935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATAATATCTGAGCCT	-2	True	NA	NA	False	AGTAAA	-23	NA	81721300	81701336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_17452.known	chr1	+	556	2	FSM	ENSG00000282221.1	ENST00000633182.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTTGTATGCAGACAA	-8	True	NA	NA	False	TATAAA	-15	NA	201399632	201401190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201399791_201400792
transcript_174524.known	chr8	-	1705	7	FSM	ENSG00000104231.11	ENST00000522520.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	82.3724603385271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTATAGGTTTACTTAA	9	True	NA	-61	True	NA	NA	NA	81721289	81701764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_174529.known	chr8	-	772	7	FSM	ENSG00000104231.11	ENST00000521287.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	129.191610494731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAGAAATCACAGGGA	3	True	NA	NA	False	NA	NA	NA	81721295	81702681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_174533.known	chr8	-	633	6	FSM	ENSG00000104231.11	ENST00000517588.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	85.7517346763318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	35	False	NA	-3	True	AATAAA	-18	NA	81721263	81702913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_174534.known	chr8	-	664	6	FSM	ENSG00000104231.11	ENST00000520604.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	131.085620874297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATAACAAATTTACAGC	28	True	NA	-82	True	NA	NA	NA	81732345	81702992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81732198
transcript_174535.known	chr8	+	1852	5	FSM	ENSG00000164695.5	ENST00000297265.5	1852	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.7169905660283	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCGTTATTATTTTT	-21	True	NA	NA	False	AATAAA	-2	NA	81732447	81759515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_81732817_81753063_81753242_81755369_81755485_81758141_81758296_81758479
transcript_174537.known	chr8	-	1778	8	FSM	ENSG00000104231.11	ENST00000523096.5	1778	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	115.819705066248	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	-2	True	NA	-18	True	AATAAA	-14	NA	81721300	81701721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703104_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_174538.known	chr8	-	3109	8	FSM	ENSG00000104497.15	ENST00000345957.9	3109	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	9.70167248362837	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCTGTGTTGTTCATA	-13	True	NA	-4	True	AATAAA	-18	NA	81842185	81799582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81842121
transcript_17454.known	chr1	-	6110	9	FSM	ENSG00000159173.19	ENST00000361379.9	6110	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTGTAAACCTTACTT	-1	True	NA	NA	False	AATACA	-16	NA	201421730	201403783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201409251_201410325_201410436_201411356_201411534_201413031_201413122_201414517_201414650_201415212_201415255_201417115_201417120_201417782_201417813_201421672
transcript_174541.known	chr8	-	3032	7	FSM	ENSG00000104497.15	ENST00000353788.8	3032	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	27.7993804887007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGTGTTGTTCATATG	23	True	NA	-2	True	AATAAA	-20	NA	81842193	81799580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81839611_81840083_81842121
transcript_17455.known	chr1	-	6142	8	FSM	ENSG00000159173.19	ENST00000622580.4	6142	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	0.989743318610787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTGCATGCATTTTG	8501	False	NA	NA	False	AATACA	-32	NA	201421746	201403767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201409251_201410325_201410436_201411356_201411534_201413031_201413122_201414517_201414650_201415212_201415259_201417782_201417813_201421672
transcript_174553.known	chr8	+	2385	15	FSM	ENSG00000133739.16	ENST00000517875.5	2385	15	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_5	15.175167685588	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATCACAGAAATAGAA	18	True	NA	18	True	AAAAAG	-25	NA	85107237	85138074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
transcript_174554.known	chr8	+	1964	8	FSM	ENSG00000133740.11	ENST00000416274.7	1964	8	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_6	81.4982158312283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	0	True	NA	12	True	AATAAA	-19	NA	85177153	85214518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212156_85212205_85213752
transcript_174555.known	chr8	+	1890	8	FSM	ENSG00000133740.11	ENST00000418930.6	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	86.6927485610026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	31	False	NA	12	True	AATAAA	-19	NA	85177224	85214518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212159_85212205_85213752
transcript_174557.known	chr8	-	475	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_4	782.929235308019	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-7	True	NA	-15	True	AATAAA	-18	NA	85220375	85214501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
transcript_174558.known	chr8	-	887	4	FSM	ENSG00000176731.12	ENST00000619594.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	1674	junction_3	77.7231554228782	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCAGAGCCCTTTGTTT	-6	True	NA	NA	False	ATTAAA	-17	NA	85220374	85214047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85220305
transcript_174561.known	chr8	-	734	3	FSM	ENSG00000176731.12	ENST00000614462.4	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	721.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	1	True	NA	NA	False	AATATA	-25	NA	85220367	85214076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85217385_85217503_85220305
transcript_174562.known	chr8	+	1721	7	FSM	ENSG00000164879.7	ENST00000285381.3	1721	7	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	2.7938424357067	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGAGTGTTGTGTTTTTT	1	True	NA	6	True	AATAAA	-16	NA	85438858	85449040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85438944_85439711_85439910_85442072_85442192_85444033_85444127_85445155_85445219_85446141_85446298_85448033
transcript_174563.known	chr8	+	1562	7	FSM	ENSG00000104267.10	ENST00000285379.10	1562	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	17.7074999803912	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTTATTTATTTATT	1	True	NA	19	True	AATAAA	-44	NA	85464006	85481493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323_85474417_85475797_85475861_85477119_85477276_85480669
transcript_174566.known	chr8	-	2578	3	FSM	ENSG00000253549.6	ENST00000654303.1	2578	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATACTGATTTGCTT	18	False	NA	NA	False	AATAAA	-21	NA	85463801	85440595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85442238_85462735_85462802_85462931
transcript_174568.known	chr8	-	1901	3	FSM	ENSG00000253549.6	ENST00000517697.6	1901	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATACTGATTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	85464420	85440595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85442238_85462735_85462802_85464227
transcript_174569.known	chr8	-	796	3	FSM	ENSG00000253549.6	ENST00000524052.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGATTGCTTTTTT	537	False	NA	NA	False	AATAAA	-36	NA	85463282	85456484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85456864_85462735_85462802_85462931
transcript_174571.nic	chr8	+	1069	2	ISM	ENSG00000104267.10	ENST00000518231.1	587	3	-69	7810	-26	-7810	5prime_fragment	FALSE	canonical	3	241	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTTTTTTTTTTAT	31	False	NA	NA	False	AAAAAG	-22	NA	85463941	85466166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_85464116_85465271
transcript_174572.known	chr8	-	2557	3	FSM	ENSG00000147613.8	ENST00000276616.3	2557	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGGCAAAGAATTTT	-3	True	NA	NA	False	AATAAA	-21	NA	86069668	86047108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86048768_86063964_86064632_86069437
transcript_174574.known	chr8	+	4877	25	FSM	ENSG00000123124.14	ENST00000517970.6	4877	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	20.1431939842938	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCATAAAAGAGTTAAGT	-19	True	NA	NA	False	AAAAAG	-9	NA	86342546	86468503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_86342931_86368938_86369032_86374029_86374121_86380725_86380865_86381504_86381630_86398341_86398480_86398571_86398639_86402018_86402204_86411537_86411875_86425222_86425319_86427642_86427818_86430696_86430752_86431405_86431491_86431614_86431744_86435451_86435528_86435632_86435705_86438584_86438674_86442618_86442779_86448147_86448282_86448372_86448514_86452558_86452680_86457920_86458026_86461223_86461321_86461773_86461847_86466793
transcript_17458.nnic	chr1	-	1479	3	NNC	ENSG00000174307.7	novel	896	3	NA	NA	-252	359	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	112.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGCTGAGTGAAATTC	NA	False	NA	-3	True	AATGAA	-28	NA	201469489	201465493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_201466179_201468340_201468949_201469303
transcript_174583.known	chr8	-	2970	10	FSM	ENSG00000176623.12	ENST00000406452.8	2970	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	22.2660678562196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	5671	False	86508706	-11	True	AATAAA	-19	NA	86508686	86472348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_174585.nic	chr8	-	1147	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	73.4198143269409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTAATATATGAACTAT	5555	False	NA	-39	True	AATAAA	-23	NA	86508802	86474248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_17459.known	chr1	-	2749	2	FSM	ENSG00000174307.7	ENST00000367311.5	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGATCAATTGGTGAT	7	True	NA	NA	False	NA	NA	NA	201469188	201464277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201466179_201468340
transcript_174592.known	chr8	-	1106	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	71.1863751008576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCATGGCTCAGGCA	-17	True	NA	-19	True	AATAAA	-26	NA	86508675	86474111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_174593.known	chr8	-	1164	9	FSM	ENSG00000176623.12	ENST00000519966.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	96.5963735085329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGGAGATCAAGCAAAG	-23	True	NA	72	True	NA	NA	NA	86508681	86474020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_174596.nnic	chr8	-	1028	9	NNC	ENSG00000176623.12	novel	810	8	NA	NA	-116	-1099	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	86.3465944609282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTAGTTGTGTTCAT	5555	False	NA	NA	False	AGTAAA	-21	NA	86508802	86475510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_86475597_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_1746.known	chr1	+	2827	7	FSM	ENSG00000157870.17	ENST00000444521.6	2827	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	150.135956904252	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	228	False	NA	18	True	AATAAA	-18	NA	2586749	2591467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588335_2588454_2588549_2588626_2588921_2589041_2589409
transcript_174602.nic	chr8	-	2971	7	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-116	1897	intron_retention	FALSE	canonical	3	220	junction_2	18.7209033495241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGTGTGGTAGCAC	5555	False	NA	NA	False	AATAAA	-9	NA	86508802	86476862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_174606.known	chr8	+	4857	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_4	22.1295016606791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	-15	True	NA	32	True	AATAAA	-20	NA	86514434	86561498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
transcript_17461.known	chr1	+	11645	27	FSM	ENSG00000134369.16	ENST00000367295.5	11645	27	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_10	23.456903703621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTTCTCTAGCTCCCT	-6	True	NA	16	True	AATAAA	-19	NA	201739867	201826969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201740077_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790553_201790578_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
transcript_174610.nic	chr8	+	968	10	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-35	14858	-35	1307	5prime_fragment	FALSE	canonical	3	213	junction_4	23.8689839553704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACAAGAATTCAGGTGTT	NA	False	NA	38	True	CATAAA	-27	NA	86514399	86546640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594
transcript_174613.known	chr8	+	817	8	FSM	ENSG00000085719.13	ENST00000621783.4	817	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	89.4392964814798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAAGAAGCCTCCAG	-13	True	NA	NA	False	NA	NA	NA	86514436	86544808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_86514542_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739
transcript_174614.known	chr8	-	11551	10	FSM	ENSG00000156103.16	ENST00000286614.11	11551	10	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_4	5.58658003998957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCATAGACATTGTGGT	1	True	NA	-12	True	AATAAA	-17	NA	88327483	88032010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_88041796_88046668_88046785_88056127_88056279_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
transcript_174620.nnic	chr8	-	2886	10	NNC	ENSG00000156103.16	novel	551	5	NA	NA	-207	-13325	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	12.7114219076223	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTCTATACTAGTATAA	152	False	NA	NA	False	AAAAAG	-26	NA	88327690	88045335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_88046249_88046668_88046785_88056127_88056279_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
transcript_174622.nic	chr8	-	3451	9	ISM	ENSG00000156103.16	ENST00000286614.11	11551	10	-352	13325	190	-13325	5prime_fragment	FALSE	canonical	3	30	junction_3	5.7213962456729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTCTATACTAGTATAA	7	True	NA	NA	False	AAAAAG	-26	NA	88327835	88045335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_88046785_88056127_88056279_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
transcript_174623.known	chr8	-	1512	8	FSM	ENSG00000156103.16	ENST00000544227.5	1512	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.6361967928548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTAAAGAGGCCTAAATA	7	True	NA	NA	False	ACTAAA	-3	NA	88327206	88069232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_88069523_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
transcript_174630.known	chr8	+	594	2	FSM	ENSG00000253553.8	ENST00000520849.5	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAACGTTCCAGCAAA	5	True	NA	NA	False	AGTAAA	-12	NA	88327843	88329467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_88327899_88328928
transcript_174632.known	chr8	-	4227	5	FSM	ENSG00000251136.10	ENST00000653574.1	4227	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.35414346693485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGATATAACTTTAACT	1560	False	NA	NA	False	ACTAAA	-12	NA	89757812	89718519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_89721375_89722014_89722157_89724628_89724967_89725517_89725642_89757044
transcript_174634.known	chr8	-	1750	3	FSM	ENSG00000251136.10	ENST00000655144.2	1999	3	0	249	0	-56	multi-exon	FALSE	canonical	3	14	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATCCTCCAAAATTTT	3	True	NA	NA	False	NA	NA	NA	89757722	89724018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_89724967_89725517_89725642_89757044
transcript_174636.known	chr8	+	2516	11	FSM	ENSG00000104312.8	ENST00000220751.5	2516	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	76.6123358213284	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCCCTTTCTTCC	-7	True	NA	10	True	AATAAA	-20	NA	89757815	89791064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89758234_89762828_89762983_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_17464.nnic	chr1	+	2386	6	NIC	ENSG00000134369.16	novel	13891	34	NA	NA	-309	-79430	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	8.20731381147328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTAACATCGTATCTG	NA	False	NA	NA	False	ACTAAA	-39	NA	201538817	201719178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_201539343_201588538_201588650_201622852_201623607_201629403_201629508_201712816_201712920_201718389
transcript_174643.known	chr8	+	1916	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	96.6825018958421	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAATTTTTATGTCTCT	-17	True	NA	19	True	AGTAAA	-21	NA	89757805	89790608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_174648.known	chr8	+	4209	6	FSM	ENSG00000164823.11	ENST00000297438.6	4209	6	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_1	56.78520934187	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCAAGTTCCACTAAA	11	False	NA	NA	False	AATAAA	-14	NA	89901858	89927868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
transcript_174653.known	chr8	-	4907	19	FSM	ENSG00000104320.14	ENST00000396252.6	4907	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	71.9722168617863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATACTGTATTTAAGTC	NA	False	NA	-11	True	AATAAA	-14	NA	90003228	89933335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524_89984734_89984916_89984974_90003111
transcript_174654.known	chr8	-	4622	16	FSM	ENSG00000104320.14	ENST00000265433.8	4622	16	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_13	19.4520493064927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTATTTAAGTCAAAAG	-24	True	NA	-6	True	AATAAA	-19	NA	89984667	89933330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_174656.known	chr8	+	1766	12	FSM	ENSG00000104325.7	ENST00000522161.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	171.437914936241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	8	True	NA	NA	False	AATAAA	-13	NA	90001476	90051999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90001562_90005447_90005846_90006035_90006278_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_174659.nic	chr8	-	1801	11	ISM	ENSG00000104320.14	ENST00000265433.8	4622	16	-44	20107	-44	-10079	5prime_fragment	FALSE	canonical	3	147	junction_8	21.5118571955096	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAATGGATGATGTGGCC	NA	False	NA	NA	False	AATAAA	-5	NA	89984711	89953437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_174661.known	chr8	+	2760	10	FSM	ENSG00000104325.7	ENST00000220764.7	2760	10	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	38.5256047612782	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCAACCTTTTTT	8	True	NA	NA	False	AATAAA	-16	NA	90001476	90053633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_174664.nic	chr8	-	1546	10	ISM	ENSG00000104320.14	ENST00000265433.8	4622	16	-44	21953	-44	-11925	5prime_fragment	FALSE	canonical	3	147	junction_7	22.6274169979695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTTTGATAACTTC	NA	False	NA	NA	False	NA	NA	NA	89984711	89955283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_174665.known	chr8	+	897	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.276908555049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTCTAATAAATTCTT	7	True	NA	NA	False	AATAGA	-34	NA	90001475	90051972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_174671.known	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_10	27.3569004092203	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-1	True	NA	0	True	AATAAA	-22	NA	90082879	90058607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
transcript_174676.known	chr8	-	4992	3	FSM	ENSG00000180694.14	ENST00000458549.7	4992	3	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	33	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCGCTTTTCTTT	4	True	NA	-7	True	AATAAA	-14	NA	90646083	90621999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90625863_90631551_90631708_90645110
transcript_174683.known	chr8	-	1174	2	FSM	ENSG00000180694.14	ENST00000422900.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACACCTATTCACAA	613	False	NA	NA	False	NA	NA	NA	90645512	90625090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90625863_90645110
transcript_174684.known	chr8	+	5049	13	FSM	ENSG00000123119.12	ENST00000417640.7	5049	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	8.76665082381331	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTCTACAAATGAAAAA	-15	True	NA	NA	False	AATAAA	-16	NA	90791774	90959393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90791986_90801690_90801716_90824716_90824826_90872127_90872154_90881032_90881131_90917491_90917629_90925534_90925657_90928222_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_174688.known	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	34.2660181520993	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-1	True	NA	-17	True	AATAAA	-20	NA	90985238	90958470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
transcript_174696.known	chr8	-	841	8	FSM	ENSG00000155099.8	ENST00000518869.1	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	162.938075128346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTGCAAGGCGATTT	-16	True	NA	NA	False	NA	NA	NA	91040872	90995810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91024288_91024367_91040643
transcript_174698.known	chr8	-	2759	7	FSM	ENSG00000155099.8	ENST00000285419.8	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	38.0336108666474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTATATACACTTGAATA	-3	True	NA	-16	True	AATAAA	-26	NA	91040859	90993801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91040643
transcript_1747.known	chr1	+	2765	7	FSM	ENSG00000157870.17	ENST00000378424.9	2765	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	154.675646291055	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	-28	True	NA	18	True	AATAAA	-18	NA	2586779	2591467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588335_2588454_2588549_2588626_2588953_2589041_2589409
transcript_174706.known	chr8	+	1631	8	FSM	ENSG00000155100.11	ENST00000522894.5	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	96.2977949182766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTGCTTTAATAATT	-14	True	NA	NA	False	AATATA	-24	NA	91070324	91085417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91076591_91076732_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_174707.known	chr8	+	3148	7	FSM	ENSG00000155100.11	ENST00000404789.8	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	13.0596920161065	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTGCTTGAATTGT	5	True	NA	NA	False	AATAAA	-21	NA	91070343	91087093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_174708.known	chr8	-	4892	3	FSM	ENSG00000253738.3	ENST00000522817.3	4935	3	43	0	40	0	multi-exon	FALSE	canonical	3	65	junction_1	129.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTGACCACTGT	-1	True	NA	NA	False	AATAAA	-41	NA	91070149	91059317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91063747_91069578_91069823_91069930
transcript_174709.known	chr8	-	2171	2	FSM	ENSG00000253738.3	ENST00000524003.1	2171	2	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGGACTATGACTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	91070189	91067910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91069823_91069930
transcript_174719.known	chr8	-	7627	13	FSM	ENSG00000079102.16	ENST00000617740.4	7627	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	8.08762772524937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-4	True	NA	1	True	AATAAA	-25	NA	92095654	91954966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095027_92095172_92095346
transcript_174725.known	chr8	-	7537	12	FSM	ENSG00000079102.16	ENST00000523629.5	7537	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	7.43900819835592	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATGTCCTTGGTCAGT	-1	True	NA	-7	True	AATAAA	-17	NA	92103226	91954974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92102856
transcript_174727.known	chr8	-	7372	11	FSM	ENSG00000079102.16	ENST00000615601.4	7372	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	6.43739077577243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-1	True	NA	1	True	AATAAA	-25	NA	92103226	91954966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92102856
transcript_174728.known	chr8	-	2370	11	FSM	ENSG00000079102.16	ENST00000360348.6	2370	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	8.10925397308532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAAGGGCATGAGCATT	8170	False	NA	NA	False	AAAAAG	-8	NA	92095215	91959786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095027
transcript_174732.known	chr8	-	3563	5	FSM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	27.8433115846517	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGCCTTTTAGTCCTC	-4	True	NA	-13	True	AATAAA	-18	NA	92966144	92883634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_174736.known	chr8	+	1943	10	FSM	ENSG00000188343.14	ENST00000518116.5	1943	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	171.792366780223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGTCAATCATGGCT	37	True	NA	14	True	AATAAA	-19	NA	93700613	93729250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93724509_93724596_93726393_93726514_93728204
transcript_174737.known	chr8	+	1014	9	NNC	ENSG00000188343.14	novel	4198	9	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	156.114541282995	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	16	True	NA	NA	False	ACTAAA	-41	NA	93700592	93728389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705006_93709759_93709768_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_174738.known	chr8	+	1179	9	FSM	ENSG00000188343.14	ENST00000359421.9	1179	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	153.831431687416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCTTTAAAAAATATT	-15	True	NA	NA	False	ATTAAA	-23	NA	93700561	93728446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93707201_93707282_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_174740.known	chr8	+	4198	9	FSM	ENSG00000188343.14	ENST00000518322.6	4198	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	143.352493874366	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCATAGCAAGCAGGAT	-27	True	NA	NA	False	NA	NA	NA	93700549	93731527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_174742.known	chr8	+	914	8	FSM	ENSG00000188343.14	ENST00000423990.6	914	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	170.813898015068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	5	True	NA	NA	False	ACTAAA	-41	NA	93700581	93728389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93726393_93726514_93728204
transcript_174744.known	chr8	+	582	7	FSM	ENSG00000188343.14	ENST00000522803.5	582	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.489133872186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCGTCATCTGGAGGAA	-6	True	NA	NA	False	NA	NA	NA	93700570	93709813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93702519_93702544_93703619_93703689_93704908_93705011_93708010_93708017_93709770
transcript_174745.known	chr8	+	1072	4	FSM	ENSG00000188343.14	ENST00000522324.5	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	47.5137407026173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGACTTTCTTAAACTA	-27	True	NA	NA	False	NA	NA	NA	93700549	93705552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908
transcript_174747.known	chr8	-	8530	4	FSM	ENSG00000183808.12	ENST00000520560.6	8530	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	39.1946708395698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	9	True	NA	-4	True	AATAAA	-19	NA	93741009	93728154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_93736439_93737306_93737356_93740628_93740697_93740880
transcript_174748.known	chr8	-	8423	3	FSM	ENSG00000183808.12	ENST00000519109.6	8423	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	36	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	345	False	NA	-4	True	AATAAA	-19	NA	93740718	93728154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_93736439_93737306_93737356_93740628
transcript_174749.known	chr8	-	8470	3	FSM	ENSG00000183808.12	ENST00000399300.7	8470	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	1	True	NA	-4	True	AATAAA	-19	NA	93741017	93728154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_93736439_93737306_93737356_93740880
transcript_174752.known	chr8	+	4678	28	FSM	ENSG00000164953.17	ENST00000453321.8	4678	28	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_18	11.8269414139868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCGACTCCTTTGTTC	-14	True	NA	72	True	CATAAA	-21	NA	93754893	93818121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_174757.known	chr8	+	1319	3	FSM	ENSG00000164953.17	ENST00000475305.1	1319	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAATATCATTGTT	-2	True	NA	NA	False	NA	NA	NA	93754905	93759480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93755777_93755867_93758482
transcript_174758.known	chr8	+	3296	29	FSM	ENSG00000164953.17	ENST00000323130.8	3296	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	19.373082525262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGATTACTGATCTCAAT	7	True	NA	NA	False	AATAAA	-21	NA	93754914	93819234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371_93816516_93818989
transcript_174759.known	chr8	+	4084	27	FSM	ENSG00000164953.17	ENST00000683953.1	4084	27	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.5850821746293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAAAATATATACTAAA	7	True	NA	-15	True	TATAAA	-19	NA	93754914	93817637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_174760.known	chr8	+	2554	3	FSM	ENSG00000164951.16	ENST00000520728.5	2554	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTATTTGTATTAA	23	True	NA	NA	False	AAGAAA	-9	NA	93916933	93924388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93917080_93917910_93917946_93922015
transcript_174764.known	chr8	+	4210	2	FSM	ENSG00000164951.16	ENST00000297598.5	4210	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	12	True	NA	23	True	ATTAAA	-22	NA	93916922	93926068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93917080_93922015
transcript_174766.known	chr8	-	2187	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	9.90896059130321	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-2	True	NA	NA	False	AATAAA	-23	NA	94262319	94249252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
transcript_174767.known	chr8	-	2103	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	8.86002257333467	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	94262350	94249252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
transcript_174769.known	chr8	-	3074	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_12	20.6526175640014	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	2	True	NA	-1	True	AATAAA	-21	NA	94475115	94371959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_174774.known	chr8	-	1879	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	54.1623075169029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATTCTTAAAGCATA	11	True	NA	NA	False	AATAAA	-1	NA	94475062	94431159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
transcript_174775.known	chr8	-	5391	2	FSM	ENSG00000265817.4	ENST00000481490.3	5391	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTGTACTTTTTTT	-1	True	NA	-3	True	AATACA	-16	NA	94436944	94427715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94432657_94436494
transcript_174776.known	chr8	-	6478	24	FSM	ENSG00000164944.12	ENST00000297591.10	6478	24	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_19	15.0341765663556	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTATGAGTCTCATTC	-4	True	NA	NA	False	AATACA	-21	NA	94553469	94487688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94488861_94489938_94490083_94491577_94491910_94492651_94492819_94494859_94494957_94495730_94495892_94496327_94496481_94499373_94499507_94506499_94506718_94509687_94509941_94510416_94510653_94511184_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
transcript_174778.known	chr8	-	2183	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACATTTTGCTGCCAC	-5	True	NA	-7	True	ATTAAA	-20	NA	94639467	94637284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94637300_94639500
transcript_174780.known	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_14	116.081503933898	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	7	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_174787.known	chr8	+	3746	15	FSM	ENSG00000104413.18	ENST00000423620.6	3746	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	193.637903714903	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	69	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94705924
transcript_174789.nic	chr8	+	2635	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-43	-74	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	136.522723682296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCATGATGATAT	13	True	NA	33	True	AATAAA	-43	NA	94641130	94706441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_174791.nic	chr8	+	3711	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	136.522723682296	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	75	False	NA	20	True	AATAAA	-21	NA	94641079	94707466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_174793.known	chr8	+	3465	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	182.704631163309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	37	False	NA	20	True	AATAAA	-21	NA	94641203	94707466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
transcript_174797.nic	chr8	+	2502	12	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-200	32221	-75	6672	5prime_fragment	FALSE	canonical	3	524	junction_4	50.9267826402046	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATAGATTAATTAGCCA	408	False	NA	NA	False	AAAACA	-21	NA	94640998	94675037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307
transcript_174799.nic	chr8	+	1521	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-53	38893	-28	0	5prime_fragment	FALSE	canonical	3	524	junction_4	45.7005821612432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGCATGAAAATAGTCT	-21	True	NA	12	True	AATAAA	-22	NA	94641145	94668365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_174800.nic	chr8	+	3141	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-142	37362	-17	1531	5prime_fragment	FALSE	canonical	3	524	junction_4	45.7005821612432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACCTTTTTGAAAATG	52	False	NA	NA	False	NA	NA	NA	94641056	94669896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_174803.known	chr8	+	1813	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	893	False	NA	20	True	AATAAA	-21	NA	94705653	94707466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94705700_94707500
transcript_174804.known	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_7	17.4540843852777	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	0	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
transcript_174817.known	chr8	+	1196	10	FSM	ENSG00000156170.13	ENST00000517976.5	1196	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	91.8341231397105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCATTGATGTTAATTCT	19	True	NA	7	True	ATTAAA	-9	NA	95025020	95057946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95036301_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_174821.known	chr8	+	946	9	FSM	ENSG00000156170.13	ENST00000454358.6	946	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	57.8509669322821	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	9	True	NA	-3	True	AAAACA	-6	NA	95025067	95057936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_174826.known	chr8	+	1795	9	FSM	ENSG00000156170.13	ENST00000396124.9	1795	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	73.7596392005818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTACATTCTGCGCTAT	-13	True	NA	4	True	ATTAAA	-17	NA	95024988	95058710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95025206_95031994_95032095_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_174829.known	chr8	+	4645	27	FSM	ENSG00000164941.14	ENST00000523731.6	4645	27	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_11	30.7036801756949	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATGGGAAGAAATCAT	-2	True	NA	NA	False	NA	NA	NA	94823286	94881746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94823562_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
transcript_17484.known	chr1	+	11416	24	FSM	ENSG00000198700.10	ENST00000361565.9	11416	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	223.754447844186	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCGTAGTGCTGCCTC	-24	True	NA	4	True	AATAAA	-17	NA	201829156	201884291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874831_201874937_201875151_201875229_201875943
transcript_174845.known	chr8	-	2674	12	FSM	ENSG00000175305.18	ENST00000308108.9	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	15.9103895573857	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGGAGA	0	True	NA	11	True	AATAAA	-32	NA	94895201	94880223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_174848.known	chr8	-	5631	5	FSM	ENSG00000164938.14	ENST00000448464.6	5631	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	28.9006920332369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	9	True	NA	-2	True	AATAAA	-17	NA	94949366	94925971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94930729_94932069_94932108_94939859_94940221_94940829_94941092_94949153
transcript_174849.known	chr8	-	5605	4	FSM	ENSG00000164938.14	ENST00000342697.5	5605	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	38.7327022323801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	-3	True	NA	-2	True	AATAAA	-17	NA	94949378	94925971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94930729_94939859_94940221_94940829_94941092_94949153
transcript_174850.known	chr8	+	2901	2	FSM	ENSG00000175895.4	ENST00000315367.4	2901	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTCTGTATATT	5	True	NA	7	True	AATAAA	-18	NA	95133784	95156685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95134031_95154030
transcript_174854.known	chr8	-	3340	6	FSM	ENSG00000156172.6	ENST00000286688.6	3340	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.87814388593306	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATTTTGATGTT	2	True	NA	-4	True	AGTAAA	-24	NA	95269201	95244912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_95247771_95252187_95252284_95259839_95259906_95260467_95260533_95263686_95263775_95269034
transcript_174856.known	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2664.83361347383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	2	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
transcript_174857.known	chr8	-	695	4	FSM	ENSG00000156467.10	ENST00000523920.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	2526.0277556318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGGGAAAGAAAAGAAAGAG	-5	True	NA	NA	False	NA	NA	NA	96235546	96231094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231516_96231773_96231941_96233155_96233228_96235511
transcript_174858.known	chr8	-	8459	4	FSM	ENSG00000156467.10	ENST00000287022.10	8459	4	0	0	0	0	multi-exon	FALSE	canonical	3	4472	junction_3	633.635191222485	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTCTGTGTCTGGC	-4	True	NA	NA	False	AATAAA	-16	NA	96235545	96222946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231133_96231773_96231941_96233155_96233228_96235511
transcript_174859.known	chr8	-	750	3	FSM	ENSG00000156467.10	ENST00000519322.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	4472	junction_2	772	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATTTGACATTTTAAAAA	-4	True	NA	NA	False	NA	NA	NA	96235545	96231296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231941_96233155_96233228_96235511
transcript_174860.known	chr8	-	515	4	FSM	ENSG00000156467.10	ENST00000517523.1	515	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2814.33722215373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGTTTTTGAATTC	2339	False	NA	-45	True	AATAAA	-13	NA	96233219	96230938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231133_96231531_96231622_96231773_96231941_96233155
transcript_174862.known	chr8	-	1463	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_7	40.0015305829613	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGAAACCATTTGATAC	-8	True	NA	14	True	AATAAA	-36	NA	96261610	96239401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_174863.nnic	chr8	-	1103	7	NIC	ENSG00000156469.9	novel	1463	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_6	156.781961122233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTCGGGTCTCAACT	-14	True	NA	-8	True	AATAAA	-14	NA	96261616	96239423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96261500
transcript_174871.known	chr8	+	4990	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	30.6113631770223	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	96261901	96336995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_174879.known	chr8	+	2366	11	FSM	ENSG00000156471.13	ENST00000337004.8	2366	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.0311118726137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTGTAAAATGCTC	-2	True	NA	30	True	AATAAA	-27	NA	96261912	96334552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96262220_96273298_96273391_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_174885.known	chr8	+	3307	5	FSM	ENSG00000169439.12	ENST00000302190.9	3307	5	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	45.7684389071771	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTCTTCAACTGTA	0	True	NA	27	True	AATAAA	-40	NA	96493812	96611790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96494332_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_174888.known	chr8	+	677	5	FSM	ENSG00000169439.12	ENST00000522911.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	342.359734051772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGCCATTCTGGCACT	195	False	NA	NA	False	AATAAA	-44	NA	96494007	96609643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96494044_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_174892.known	chr8	+	1932	8	FSM	ENSG00000104324.16	ENST00000220763.10	1932	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	2.39045721866879	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTTCATTTATG	-5	True	NA	14	True	AATAAA	-19	NA	96645241	97143501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96645403_96784863_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
transcript_174893.known	chr8	+	7662	12	FSM	ENSG00000147649.10	ENST00000336273.8	7662	12	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_6	27.6940188070628	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCTCAAGAAATATAAC	-24	True	NA	20	True	AATAAA	-23	NA	97644183	97730260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
transcript_174897.known	chr8	+	2184	11	FSM	ENSG00000147649.10	ENST00000519934.5	2184	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	91.0527868876071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTTCTTAAAATAC	58	False	NA	NA	False	ACTAAA	-25	NA	97644545	97725243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
transcript_174903.nic	chr8	+	1884	9	ISM	ENSG00000147649.10	ENST00000336273.8	7662	12	-215	16525	-215	-5352	5prime_fragment	FALSE	canonical	3	272	junction_6	28.5654402206582	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCAAGGTGAAGATA	262	False	NA	NA	False	AAAAAG	-15	NA	97643968	97713735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661
transcript_174908.nic	chr8	+	1014	2	ISM	ENSG00000147649.10	ENST00000522313.1	672	5	-824	29998	-215	-29998	5prime_fragment	FALSE	canonical	3	286	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGGTAAGTTTGGGAG	262	False	NA	NA	False	AAGAAA	-3	NA	97643968	97661166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_97644888_97661071
transcript_174912.known	chr8	+	2442	7	FSM	ENSG00000104341.17	ENST00000521545.7	2442	7	0	0	0	0	multi-exon	TRUE	canonical	3	6147	junction_4	387.649075267252	2083	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATACTTGACCAGGTC	-13	True	NA	NA	False	AAAAAG	-44	NA	97775787	97853013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97776109_97805352_97805465_97815327_97815402_97816057_97816181_97819139_97819239_97825057_97825154_97851396
transcript_174923.known	chr8	+	4133	19	FSM	ENSG00000132561.14	ENST00000254898.7	4133	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	13.3425893798027	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACTTTAAAAAGAATGA	-19	True	NA	NA	False	AATAAA	-20	NA	97869063	98036724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
transcript_174924.known	chr8	+	3554	19	FSM	ENSG00000132561.14	ENST00000521689.5	3554	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	10.8063767182982	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACACAACTTGCTTCTG	3812	False	NA	NA	False	AATATA	-3	NA	97868839	98035978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033098_98033177_98033560_98033660_98035656
transcript_174932.known	chr8	+	2031	8	FSM	ENSG00000132561.14	ENST00000523490.1	2031	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	10.860901604999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	30	True	NA	NA	False	NA	NA	NA	97869112	98004286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660
transcript_174934.known	chr8	-	440	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	2433.02511033076	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	0	True	NA	-18	True	AATAAA	-19	NA	98045544	98041720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
transcript_174936.known	chr8	-	498	5	FSM	ENSG00000156482.11	ENST00000287038.8	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	3950	junction_4	1118.44520987843	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-1	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045507
transcript_174937.known	chr8	-	1129	5	FSM	ENSG00000156482.11	ENST00000521726.1	1129	5	0	0	0	0	multi-exon	FALSE	canonical	2	141	junction_4	2736.49323953121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACCTTTTCACCTAC	NA	False	NA	-104	True	NA	NA	NA	98046469	98041806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045714
transcript_174942.known	chr8	-	274	4	FSM	ENSG00000156482.11	ENST00000523172.5	274	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2446.16725148184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCACCTACAAAATTT	-2	True	NA	-97	True	AGTAAA	-1	NA	98045546	98041799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98045346_98045400_98045507
transcript_174943.known	chr8	-	575	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	5892	junction_1	390.027634348588	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	588	False	NA	-18	True	AATAAA	-19	NA	98045514	98041720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
transcript_174944.known	chr8	+	1503	3	FSM	ENSG00000177459.11	ENST00000318528.8	1503	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGGGTGACTTTCT	-3	True	NA	7	True	AATAAA	-19	NA	98064567	98093609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_98064728_98089075_98090030_98093220
transcript_174946.known	chr8	-	848	6	FSM	ENSG00000132541.11	ENST00000520507.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	223.022510074656	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTAAATTTGAG	57	False	NA	-27	True	AGTAAA	-2	NA	98117110	98102438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108769_98117031
transcript_174947.known	chr8	-	761	5	FSM	ENSG00000132541.11	ENST00000521560.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	233.73917087215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGCTTTTACTTGAG	-4	True	NA	-52	True	TTTAAA	-39	NA	98117171	98102463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98117031
transcript_174948.known	chr8	+	4739	16	FSM	ENSG00000104356.11	ENST00000401707.7	4739	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	8.67845352326989	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGTTGTGAATATTTA	-21	True	NA	12	True	AATAAA	-17	NA	98117292	98159835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481_98136739_98136860_98136955_98140077_98140190_98140768_98140889_98146567_98146684_98148814_98149007_98150484_98150640_98156049_98156413_98157616
transcript_174955.known	chr8	-	2833	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	22.7861800221099	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCGTTTCTGTATCTTT	-11	True	NA	-2	True	AATAAA	-21	NA	98825688	98454632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_174963.known	chr8	+	1838	4	FSM	ENSG00000164920.10	ENST00000297565.9	1834	4	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGTGTCTTGCTATT	-4	True	NA	11	True	AATAAA	-28	NA	98944441	98952104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_98944824_98948838_98949609_98950655_98950756_98951518
transcript_174964.known	chr8	+	1736	4	FSM	ENSG00000164920.10	ENST00000435298.6	1736	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCAAAGGTGTCTTGC	12	False	NA	7	True	AATAAA	-24	NA	98944457	98952100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_98944824_98948838_98949609_98950655_98950756_98951600
transcript_174965.known	chr8	+	14011	62	FSM	ENSG00000132549.20	ENST00000357162.7	14011	62	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_19	6.47227564739783	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATAAGTGTCATTT	-11	True	NA	NA	False	AATAAA	-17	NA	99013273	99877580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400_99442636_99467413_99467635_99481598_99481803_99501686_99501859_99502835_99502951_99507136_99507204_99511103_99511513_99520898_99521011_99556449_99556654_99575657_99575785_99577489_99577634_99641810_99642499_99661353_99661492_99699524_99699933_99717170_99717374_99720344_99720553_99720862_99721048_99766773_99766971_99776774_99776957_99778681_99779032_99784314_99784477_99809374_99809531_99817539_99817804_99818450_99818535_99818712_99818889_99819411_99819583_99819920_99820123_99821293_99821483_99823831_99823979_99832368_99832653_99835196_99835325_99835538_99835739_99848775_99848895_99853450_99854257_99859303_99859481_99861775_99861947_99868288_99868466_99870784_99870888_99871447_99871698_99875417
transcript_174967.known	chr8	-	380	2	FSM	ENSG00000253948.3	ENST00000521696.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTTTTAATTTCTAA	282	False	NA	-11	True	AATAAA	-19	NA	99013044	98996762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98996967_99012868
transcript_174968.known	chr8	-	694	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	1861.92469116115	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGACAGTAAGTCTT	1	True	NA	-16	True	AATAAA	-12	NA	99893623	99878150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
transcript_174969.known	chr8	-	571	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	1824.80629108955	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	88	False	NA	-14	True	AATAAA	-14	NA	99893622	99878148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
transcript_174970.known	chr8	-	429	4	FSM	ENSG00000164919.11	ENST00000517682.6	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	1835.14256182516	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-1	True	NA	-14	True	AATAAA	-14	NA	99893681	99878148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
transcript_174971.known	chr8	-	724	4	FSM	ENSG00000164919.11	ENST00000518171.5	724	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1782.25157221607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATTTGTATGTTATCT	13	False	NA	NA	False	NA	NA	NA	99893697	99885991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99886383_99887489_99887619_99891907_99892053_99893638
transcript_174973.known	chr8	-	3260	5	FSM	ENSG00000156509.14	ENST00000428847.3	3260	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.77263412660235	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCTATAATTTCAGTC	-4	True	NA	NA	False	AATAAA	-24	NA	100145817	100133350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100134051_100134160_100134365_100137564_100137668_100140682_100142169_100145050
transcript_174975.known	chr8	+	947	4	FSM	ENSG00000147669.11	ENST00000353107.8	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_3	202.374789822141	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	-13	True	NA	30	True	AATAAA	-16	NA	100150635	100154003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_100150710_100151346_100151417_100151823_100151917_100153293
transcript_174977.known	chr8	+	543	3	FSM	ENSG00000147669.11	ENST00000522439.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_1	155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACCGTATATCCTACTA	-26	True	NA	NA	False	NA	NA	NA	100150622	100152209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_100150710_100151346_100151417_100151823
transcript_174980.known	chr8	-	4186	10	FSM	ENSG00000034677.13	ENST00000341084.7	4186	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	9.01165226488516	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTTCTGGTGTGTA	-1	True	NA	-10	True	AATAAA	-17	NA	100309953	100257066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100309866
transcript_174986.known	chr8	-	2779	6	FSM	ENSG00000186106.11	ENST00000519597.5	2779	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	35.6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-22	True	NA	-2	True	AATAAA	-21	NA	100559784	100520771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100532355_100532461_100533208_100533312_100559710
transcript_174987.known	chr8	-	3270	5	FSM	ENSG00000186106.11	ENST00000520311.5	3270	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	36.9078243737016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCACGATTTCTCTTTT	51	False	NA	-6	True	AATAAA	-17	NA	100559711	100520775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559037
transcript_174989.known	chr8	-	2649	5	FSM	ENSG00000186106.11	ENST00000335659.7	2649	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	8.87059749960509	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	3	True	NA	-2	True	AATAAA	-21	NA	100559759	100520771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559710
transcript_174992.known	chr8	-	2877	16	FSM	ENSG00000070756.17	ENST00000520142.2	2877	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_15	1998.80197006996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-6	True	NA	NA	False	NA	NA	NA	100722092	100702794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721620_100721728
transcript_174995.known	chr8	-	2839	16	FSM	ENSG00000070756.17	ENST00000520804.2	2839	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	2025.69338910573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-25	True	NA	NA	False	NA	NA	NA	100722753	100702794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721890_100722697
transcript_175.known	SIRV5	+	552	2	FSM	SIRV5A	SIRV506	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	12355	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987
transcript_175001.known	chr8	-	2845	16	FSM	ENSG00000070756.17	ENST00000522720.2	2845	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	2025.69338910573	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-34	True	NA	NA	False	NA	NA	NA	100722762	100702794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721887_100722697
transcript_175010.known	chr8	-	2861	15	FSM	ENSG00000070756.17	ENST00000318607.10	2861	15	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	768.935949802036	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATTTGCTTTTTTTCA	-2	True	NA	-16	True	AATAAA	-17	NA	100722088	100702915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_175017.known	chr8	-	2730	15	FSM	ENSG00000070756.17	ENST00000677380.1	2730	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	2093.65255606326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	554	False	NA	NA	False	NA	NA	NA	100722174	100702794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721728
transcript_175036.known	chr8	-	3395	14	FSM	ENSG00000070756.17	ENST00000678709.1	3395	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	754.839071371269	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1169	False	NA	NA	False	NA	NA	NA	100721559	100702050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100718281_100721390
transcript_175037.known	chr8	-	3145	14	FSM	ENSG00000070756.17	ENST00000677787.1	3145	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_9	2168.19103833085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1083	False	NA	NA	False	NA	NA	NA	100721645	100702050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_175055.known	chr8	-	2207	14	FSM	ENSG00000070756.17	ENST00000519100.6	2207	14	0	0	0	0	multi-exon	FALSE	canonical	1	101	junction_5	2110.29744391049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCAGTTCTGTTTTAA	1083	False	NA	25	True	NA	NA	NA	100721645	100703015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_175057.known	chr8	-	3116	14	FSM	ENSG00000070756.17	ENST00000523555.6	3116	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_9	797.822561874936	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGACTTTCAGGTGGT	141	False	NA	4	True	ATTAAA	-35	NA	100722587	100704096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_175089.known	chr8	-	487	5	FSM	ENSG00000070756.17	ENST00000517990.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_3	3541.0152057708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAAAAAAACATTGCAA	0	True	NA	2	True	AAGAAA	-31	NA	100706779	100703284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705030_100705588_100705674_100706650
transcript_1751.known	chr1	+	2747	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	75.4939291157463	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGCTTTCTTCTTT	-31	True	NA	19	True	AATAAA	-19	NA	2586776	2591468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_175100.known	chr8	-	964	6	FSM	ENSG00000164924.18	ENST00000395951.7	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_5	1715.17112848835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCCACAAATAGTTTT	6	True	NA	NA	False	NA	NA	NA	100950557	100920629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100950405
transcript_175101.known	chr8	-	2974	6	FSM	ENSG00000164924.18	ENST00000395956.7	2974	6	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_5	1656.67891880111	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	5333	False	NA	-14	True	NA	NA	NA	100951449	100918682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951234
transcript_175102.known	chr8	-	994	6	FSM	ENSG00000164924.18	ENST00000395953.6	994	6	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	1683.73387445879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTACTTCTATTTGAAT	5188	False	NA	NA	False	NA	NA	NA	100951594	100920586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951455
transcript_175103.known	chr8	-	2829	6	FSM	ENSG00000164924.18	ENST00000353245.7	2829	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_5	1723.52886833961	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTTTTGTTGCTTG	-5	True	NA	13	True	NA	NA	NA	100953341	100918685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100953268
transcript_175105.known	chr8	-	891	6	FSM	ENSG00000164924.18	ENST00000419477.6	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	1764.52740415104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATCCATGCTGTCCC	12	True	NA	NA	False	NA	NA	NA	100951276	100920641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951185
transcript_175114.known	chr8	-	876	4	FSM	ENSG00000164924.18	ENST00000517727.5	876	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	2039.0720656438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATGCAATTACTGAGA	6242	False	NA	NA	False	NA	NA	NA	100950540	100923986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100924299_100924915_100925040_100948595_100948901_100950405
transcript_175115.known	chr8	-	3007	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_5	1513.1360282539	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-30	True	NA	-37	True	AATAAA	-11	NA	100952993	100918578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
transcript_175116.known	chr8	-	750	5	FSM	ENSG00000164924.18	ENST00000521607.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1951.48230519777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAGAAGGAGGGGAAAAT	7882	False	NA	NA	False	NA	NA	NA	100948900	100920715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924323_100924915_100925040_100948595
transcript_175117.known	chr8	-	732	6	FSM	ENSG00000120963.12	ENST00000521272.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	717.081139063077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCAGCAAAAATAAAGGG	-34	True	NA	NA	False	NA	NA	NA	101205682	101199159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101204649_101204694_101205434
transcript_175118.known	chr8	-	959	5	FSM	ENSG00000120963.12	ENST00000519882.5	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	716.959683315596	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACAGGATAAATGGTT	505	False	NA	-30	True	AATAAA	-19	NA	101205732	101198938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101205434
transcript_175120.known	chr8	-	2672	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1474	junction_2	42.7733042393916	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTAGTCTAATTTCTT	-25	True	NA	NA	False	ATTAAA	-18	NA	101205673	101197051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
transcript_175123.known	chr8	-	3502	4	FSM	ENSG00000120963.12	ENST00000520347.5	3502	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	636.399769536937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACAGGATAAATGGTTT	950	False	NA	-29	True	AATAAA	-20	NA	101205287	101198937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332
transcript_175124.known	chr8	+	5232	16	FSM	ENSG00000083307.12	ENST00000646743.1	5232	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	5.25948877955094	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTCTGGTGCTTTC	-1	True	NA	NA	False	AATAAA	-23	NA	101492438	101669726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_101492790_101543240_101543437_101552714_101552783_101558418_101558813_101570338_101570395_101573667_101573825_101577407_101577520_101599056_101599152_101619538_101619698_101631636_101631725_101632225_101632366_101636896_101636929_101644130_101644226_101649413_101649500_101664453_101664519_101666588
transcript_175129.known	chr8	-	1613	9	FSM	ENSG00000048392.13	ENST00000522368.5	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	147.874735840846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	-1	True	NA	NA	False	TTTAAA	-44	NA	102238775	102207744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238558
transcript_175130.known	chr8	-	4774	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	40.7001228499374	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGTCTGCAGATAAA	-20	True	NA	-2	True	AATAAA	-18	NA	102238961	102204501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_175137.known	chr8	-	9008	59	FSM	ENSG00000104517.13	ENST00000521922.5	9008	59	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	99.867712738214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGTACCTTAAAGAGAT	2	True	NA	NA	False	TATAAA	-33	NA	102412759	102254197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265276_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_175140.nic	chr8	-	4834	33	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-30	40219	-19	4905	5prime_fragment	FALSE	canonical	3	109	junction_25	33.6815132667388	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCATCCTTTTTGATT	-6	True	NA	NA	False	AAAAAG	-6	NA	102412719	102293954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_175142.nic	chr8	-	3455	21	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-188	51364	-118	-6233	5prime_fragment	FALSE	canonical	3	109	junction_13	24.5191251883096	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAAGAAGAGGGTGAG	-1	True	NA	NA	False	AATAAA	-5	NA	102412877	102305099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_175145.nic	chr8	-	3083	20	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-39	57590	-28	-12459	5prime_fragment	FALSE	canonical	3	109	junction_12	25.1560228328037	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTTATCATCATGGC	-15	True	NA	NA	False	AATAAA	-32	NA	102412728	102311325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_175151.nic	chr8	-	2126	13	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-127	72865	-57	19295	5prime_fragment	FALSE	canonical	3	109	junction_5	26.6374840320094	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAAATCCAGTGCTGGTA	77	False	NA	NA	False	AATAAA	-3	NA	102412816	102326600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_175159.nic	chr8	-	2181	5	ISM	ENSG00000104517.13	ENST00000521922.5	9008	59	40	104563	-19	891	5prime_fragment	FALSE	canonical	3	180	junction_1	16.0058583025091	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTGGGGGGGATACCA	-6	True	NA	NA	False	AAAAAG	-10	NA	102412719	102358760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_175161.known	chr8	+	2376	3	FSM	ENSG00000246263.4	ENST00000520820.3	2384	3	8	0	8	0	multi-exon	FALSE	canonical	2	8	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCAATAAAAGTGGTTTT	-18	True	NA	NA	False	NA	NA	NA	102239393	102253750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102239701_102244004_102244122_102251798
transcript_175163.known	chr8	-	3659	4	FSM	ENSG00000155090.15	ENST00000395884.3	3659	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	48.1456124688429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGAATGGTCATTGCA	1554	False	NA	-7	True	AATAAA	-14	NA	102654375	102648785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102653469
transcript_175164.known	chr8	-	2915	4	FSM	ENSG00000155090.15	ENST00000285407.11	2915	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	4.49691252107735	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATGGTCATTGCATT	-6	True	NA	-5	True	AATAAA	-16	NA	102655725	102648783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102655565
transcript_175179.known	chr8	+	756	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.3527000944073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAAAGTATATGAAATC	NA	False	NA	NA	False	NA	NA	NA	102930181	102977738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
transcript_175181.nnic	chr8	+	776	3	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-24	1225	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_2	9	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGCCTCTTGTCAGT	NA	False	NA	NA	False	AATACA	-21	NA	102930157	102938943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_102930519_102937623_102937758_102938662
transcript_175183.known	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	-4	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102864624_102865102
transcript_175185.known	chr8	+	644	2	FSM	ENSG00000253320.7	ENST00000522939.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAGTTCATCATTGTCC	1	True	NA	NA	False	AATGAA	-12	NA	102864299	102880214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102864624_102879894
transcript_175189.known	chr8	-	2857	13	FSM	ENSG00000155096.15	ENST00000347770.8	2857	13	0	0	0	0	multi-exon	FALSE	canonical	2	587	junction_10	453.562258374991	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTCATTA	8236	False	NA	-4	True	AGTAAA	-17	NA	102864193	102827822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849998_102850145_102858012_102858151_102863806
transcript_175195.known	chr8	-	4229	13	FSM	ENSG00000155096.15	ENST00000682014.1	4229	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	764.900247672132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAATGTTTTTATTCCT	8237	False	NA	22	True	AGTAAA	-41	NA	102864192	102826378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829934_102830125_102830222_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
transcript_175204.known	chr8	-	3937	13	FSM	ENSG00000155096.15	ENST00000684721.1	3937	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	695.495761429692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTAATCTCAGTTCAAAA	8237	False	NA	-3	True	AAAAAG	-33	NA	102864192	102826480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828590_102829455_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849986_102850145_102858012_102858151_102863806
transcript_175205.known	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	2	1104	junction_10	252.398347102026	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	0	True	NA	-5	True	AATAGA	-20	NA	102864163	102826307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
transcript_175209.known	chr8	-	3802	12	FSM	ENSG00000155096.15	ENST00000682969.1	3802	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	683.514749821202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATTTCTATATAGTAA	8237	False	NA	38	True	TATAAA	-4	NA	102864192	102826439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828590_102829455_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
transcript_175227.known	chr8	+	5635	13	FSM	ENSG00000155097.12	ENST00000518738.2	5635	13	0	0	0	0	multi-exon	TRUE	canonical	3	412	junction_10	28.0449787543748	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	-18	True	NA	14	True	AATAAA	-16	NA	103021082	103073051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103021226_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_175232.known	chr8	+	801	4	FSM	ENSG00000164929.17	ENST00000297574.6	801	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.7540843131393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAAGACTGTCTTACCTG	29	True	NA	NA	False	NA	NA	NA	103140758	103228218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103141058_103200657_103200763_103212918_103213086_103227988
transcript_175234.known	chr8	+	2817	3	FSM	ENSG00000164929.17	ENST00000309982.10	2817	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGCAGTTACAGAGAAT	-5	True	NA	NA	False	AATAAA	-20	NA	103140724	103230305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103141058_103212918_103213086_103227988
transcript_175236.known	chr8	+	2662	2	FSM	ENSG00000164929.17	ENST00000438105.2	2662	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGCAGTTACAGAGAAT	-17	True	NA	NA	False	AATAAA	-20	NA	103140712	103230305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103141058_103227988
transcript_175237.known	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	4.7169905660283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	27	True	NA	18	True	AATAAA	-19	NA	103298897	103332866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_175239.known	chr8	+	3646	6	FSM	ENSG00000164930.12	ENST00000522484.5	3646	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	27.2983515985856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	20	False	NA	18	True	AATAAA	-19	NA	103298830	103332866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103329654_103330066_103331340
transcript_175242.known	chr8	+	1240	4	FSM	ENSG00000164932.13	ENST00000330295.10	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	2.35702260395516	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAATATCTTTAAATTAA	-25	True	NA	NA	False	AATAAA	-16	NA	103371537	103382989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103371807_103375737_103375960_103378026_103378244_103382457
transcript_175247.known	chr8	+	1970	11	FSM	ENSG00000164934.14	ENST00000612750.5	1970	11	0	0	0	0	multi-exon	FALSE	canonical	1	730	junction_2	373.211950505339	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTATTTTTGGTAA	-16	True	NA	14	True	ATTAAA	-21	NA	103415385	103443453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103427253_103430611_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_175249.known	chr8	+	5300	10	FSM	ENSG00000164934.14	ENST00000518554.2	5300	10	0	0	0	0	multi-exon	FALSE	canonical	1	730	junction_2	391.914673253134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGGCCTATTTTTGG	10	True	NA	11	True	ATTAAA	-18	NA	103415411	103443450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_175254.known	chr8	-	2891	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.5255294853706	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTGTGTGATAGATAA	28	True	NA	-1	True	AATAAA	-28	NA	103415107	103398637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
transcript_175260.known	chr8	-	1347	6	FSM	ENSG00000164933.12	ENST00000523866.1	1347	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	48.9963263929042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGCTTTAAAATTAACC	1	True	NA	NA	False	NA	NA	NA	103415069	103400057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103407633_103407785_103414783
transcript_175263.known	chr8	+	837	5	FSM	ENSG00000164934.14	ENST00000519682.5	837	5	0	0	0	0	multi-exon	FALSE	canonical	1	730	junction_2	520.08959564675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTAGTCCCAGATAC	10	True	NA	NA	False	NA	NA	NA	103415411	103427430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096
transcript_175264.known	chr8	-	2711	5	FSM	ENSG00000164933.12	ENST00000523256.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.9314280516482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGTGTGATAGATAAATA	-36	True	NA	2	True	AATAAA	-31	NA	103415171	103398634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103407633_103407785_103414783
transcript_175269.nic	chr8	+	2652	6	NIC	ENSG00000176406.23	novel	3500	20	NA	NA	-997	-32644	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9.81835016690686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGGGAAAAAATGGAAACAAT	-1	True	NA	NA	False	AAGAAA	-8	NA	103499698	103886009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_103501063_103697085_103697297_103716308_103716321_103766226_103766538_103809279_103809322_103885297
transcript_175271.known	chr8	+	1062	6	FSM	ENSG00000176406.23	ENST00000523362.5	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.91291198206288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCAACCTTGGCCCCTCT	0	True	NA	NA	False	NA	NA	NA	104223363	104251736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
transcript_175274.nic	chr8	+	2610	5	ISM	ENSG00000176406.23	ENST00000632716.1	3500	20	-1052	128606	-997	-32644	5prime_fragment	FALSE	canonical	0	0	junction_2	10.0249688278817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGGGAAAAAATGGAAACAAT	-1	True	NA	NA	False	AAGAAA	-8	NA	103499698	103886009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_103501063_103697085_103697297_103716308_103716321_103766226_103766538_103885297
transcript_175276.nic	chr8	+	1847	2	ISM	ENSG00000176406.23	ENST00000632716.1	3500	20	-1052	317047	-997	-70933	5prime_fragment	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAAAAATTAGCCAGGC	-1	True	NA	NA	False	AAAACA	-8	NA	103499698	103697568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_103501063_103697085
transcript_175277.known	chr8	-	2122	10	FSM	ENSG00000147647.13	ENST00000351513.7	2122	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.81216738114445	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTATTATCTGATTTAT	-4	True	NA	NA	False	AATAAA	-20	NA	104467055	104379430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_104379844_104381183_104381315_104392783_104392992_104424246_104424390_104427979_104428122_104429544_104429702_104444247_104444438_104447323_104447504_104451245_104451405_104466656
transcript_175278.known	chr8	-	4378	7	FSM	ENSG00000147650.12	ENST00000276654.10	4378	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	12.1575308165579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGTTCTTTATTTG	8	True	NA	-5	True	ATTAAA	-36	NA	104589258	104489235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104531906_104531964_104588818
transcript_175280.known	chr8	-	4092	6	FSM	ENSG00000147650.12	ENST00000424843.6	4092	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	21.7752152687407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTTTATTTGTTGAA	-20	True	NA	0	True	ATTAAA	-41	NA	104589024	104489230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104588818
transcript_175284.known	chr8	+	4406	14	FSM	ENSG00000164830.19	ENST00000312046.10	4406	14	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	20.2262352333789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGGATTTATTGAAT	-17	True	NA	NA	False	AATAAA	-21	NA	106657853	106752694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_175292.known	chr8	+	1174	2	FSM	ENSG00000164830.19	ENST00000661818.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTATTGTTTTGTTT	77	False	NA	NA	False	AATAAA	-17	NA	106270290	106272902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106270368_106271805
transcript_175293.known	chr8	+	1148	2	FSM	ENSG00000164830.19	ENST00000658832.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	76	False	NA	15	True	AATAAA	-17	NA	106270289	106272774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106270368_106271704
transcript_175294.known	chr8	+	1944	7	FSM	ENSG00000164830.19	ENST00000297447.10	1944	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.8640049278656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAAGATAGAATA	0	True	NA	NA	False	NA	NA	NA	106726106	106752016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106726310_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_175297.known	chr8	-	1732	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1362.911224518	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-1	True	NA	-24	True	AATAAA	-18	NA	108248716	108201739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
transcript_1753.known	chr1	+	2689	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	89.6519504652421	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	-10	True	NA	14	True	AATAAA	-14	NA	2586797	2591463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_175300.known	chr8	-	1501	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1089.03827029479	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	NA	False	NA	-27	True	AATAAA	-15	NA	108248730	108201742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_175302.known	chr8	-	1275	13	FSM	ENSG00000104408.11	ENST00000677272.1	1275	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	1098.02203479206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAGATGAAAAAAA	-4	True	NA	-84	True	NA	NA	NA	108248719	108201877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241885_108241914_108248612
transcript_175303.known	chr8	-	1158	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1267.20611320074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-4	True	NA	-27	True	AATAAA	-15	NA	108248719	108201742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_175306.known	chr8	-	1121	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	1195.44651046168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-11	True	NA	-29	True	AATAAA	-13	NA	108248726	108201744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
transcript_175308.known	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1639.94165749883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	NA	False	NA	0	True	ATTAAA	-19	NA	108248730	108230121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_175309.known	chr8	-	1663	14	FSM	ENSG00000104408.11	ENST00000518345.2	1663	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	1377.65083474921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTCATTTTATCTT	NA	False	NA	35	True	TATAAA	-19	NA	108248730	108201758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
transcript_175310.known	chr8	-	1485	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	1096.95297681046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	-3	True	NA	17	True	TATAAA	-40	NA	108248718	108201776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
transcript_175311.known	chr8	-	1394	12	FSM	ENSG00000104408.11	ENST00000519030.6	1394	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	1128.63616958956	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	108248733	108201744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108248612
transcript_175312.known	chr8	-	1669	15	FSM	ENSG00000104408.11	ENST00000676663.1	1669	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1738.54584586178	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATATAAAGGGTGACTT	11	True	NA	-33	True	AATAAA	-3	NA	108443460	108201826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108309335_108309464_108434372_108434494_108443369
transcript_175314.known	chr8	+	3527	11	FSM	ENSG00000104412.8	ENST00000220853.8	3527	11	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_9	34.626001790562	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTCCTGTTACTT	-15	True	NA	8	True	AATAAA	-21	NA	108443623	108489196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872_108455931_108469825_108469912_108470061_108470122_108475881_108475964_108476781_108476893_108479005_108479111_108486511
transcript_175316.known	chr8	+	532	5	FSM	ENSG00000104412.8	ENST00000517593.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_2	15.8823801742686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGATGGGCCACAGTT	-6	True	NA	NA	False	ATTAAA	-28	NA	108443632	108456073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872
transcript_175317.known	chr8	-	6283	2	FSM	ENSG00000164841.5	ENST00000297459.4	6283	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTTTGTCATTCTTCT	-7	True	NA	0	True	ATTAAA	-19	NA	108787594	108778973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108785138_108787475
transcript_175320.known	chr8	-	3919	10	FSM	ENSG00000120526.12	ENST00000239690.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_3	30.6718997145395	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGAGTCATTAACAAT	1	True	NA	-4	True	AATAAA	-23	NA	109334087	109240918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_109243302_109245321_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_175325.nic	chr8	-	753	4	ISM	ENSG00000120526.12	ENST00000677737.1	2384	10	-20	42090	-7	-17934	5prime_fragment	FALSE	canonical	3	349	junction_1	36.8088153692684	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGGTAAAACAAAAGTCT	-40	True	NA	NA	False	AAGAAA	-3	NA	109334128	109293348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_109293525_109296383_109296570_109322308_109322464_109333892
transcript_175326.known	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	1186.13729706978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	-30	True	NA	-14	True	NA	NA	NA	109334323	109343624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_175327.known	chr8	+	546	5	FSM	ENSG00000120533.13	ENST00000339942.11	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1342.21707912692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTTGGATTTTGAAA	-15	True	NA	32	True	AATAAA	-21	NA	109334338	109343670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334403_109336132_109336205_109339319_109339391_109340490_109340564_109343404
transcript_175330.known	chr8	+	2966	5	FSM	ENSG00000120533.13	ENST00000517311.5	2966	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	1038.3933503254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGACTCACATGATTGA	-28	True	NA	15	True	AATAAA	-15	NA	109334325	109345953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_175331.known	chr8	+	1540	5	FSM	ENSG00000120533.13	ENST00000523335.1	1540	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	1061.49458312325	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	-3	True	NA	NA	False	NA	NA	NA	109334350	109344599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340490_109340564_109343404
transcript_175335.known	chr8	+	1467	7	FSM	ENSG00000147654.15	ENST00000395785.6	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	42.3975890299856	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTGTACATCATTA	-11	True	NA	NA	False	ATTAAA	-22	NA	109539710	109565160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109539920_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_175340.known	chr8	+	2383	7	FSM	ENSG00000147654.15	ENST00000337573.10	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	54.6066743987298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCTCAAAGTTTTAATA	21	True	NA	NA	False	AATAAA	-19	NA	109540172	109565996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109540462_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_175343.known	chr8	-	6912	4	FSM	ENSG00000164794.9	ENST00000524391.6	6912	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTGACCCAATTTATCT	-2	True	NA	NA	False	ATTAAA	-31	NA	109975771	109963635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_109968600_109972257_109972788_109973927_109975193_109975618
transcript_175355.known	chr8	+	730	3	FSM	ENSG00000254339.6	ENST00000519248.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	699.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAAAAAGTCTTCTT	51	False	NA	NA	False	NA	NA	NA	114282135	114287996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284515_114287721
transcript_175358.known	chr8	+	866	3	FSM	ENSG00000254339.6	ENST00000521523.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_2	493.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTTATCATGGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	114282066	114295807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284515_114295465
transcript_175360.known	chr8	+	697	3	FSM	ENSG00000254339.6	ENST00000507929.3	1734	3	0	1037	0	-183	multi-exon	FALSE	canonical	3	736	junction_2	465.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAAGTTTGAATAGC	NA	False	NA	NA	False	NA	NA	NA	114282071	114295624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284534_114295465
transcript_175362.nnic	chr8	+	1046	3	FSM	ENSG00000254339.6	ENST00000692282.1	925	3	-121	0	-81	0	multi-exon	FALSE	canonical	3	152	junction_2	757.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	114281955	114304805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284534_114304413
transcript_175366.known	chr8	+	836	3	FSM	ENSG00000254339.6	ENST00000523682.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	184	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATGGAAGTATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	114282068	114295813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284252_114284515_114295465
transcript_175368.known	chr8	+	877	3	FSM	ENSG00000254339.6	ENST00000520543.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	212	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGAATATTGATTAT	NA	False	NA	NA	False	NA	NA	NA	114282072	114295839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284252_114284534_114295465
transcript_175375.nic	chr8	+	547	2	ISM	ENSG00000254339.6	ENST00000519248.1	730	3	-92	3482	7	-3482	5prime_fragment	FALSE	canonical	3	1667	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTCTCACAGTGGAAGG	NA	False	NA	NA	False	NA	NA	NA	114282043	114284514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_114282295_114284218
transcript_175378.known	chr8	-	1265	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	730.318156268212	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGATGTATTTTCTCT	-11	True	NA	-11	True	AATAAA	-33	NA	116755823	116644816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726161_116737712_116737716_116755665
transcript_175380.known	chr8	-	3961	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	0	0	0	multi-exon	FALSE	canonical	3	1614	junction_4	62.1334968319942	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATGTAATACACTGT	-11	True	NA	-2	True	AATAAA	-16	NA	116755823	116642129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
transcript_175389.known	chr8	-	3660	14	FSM	ENSG00000164754.16	ENST00000297338.7	3660	14	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_13	99.8070327531194	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTATTCATTAT	11	True	NA	-7	True	AATAAA	-20	NA	116874776	116845933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_116847692_116848945_116849030_116850617_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_175392.nic	chr8	-	1867	12	ISM	ENSG00000164754.16	ENST00000297338.7	3660	14	-94	4729	-94	-538	5prime_fragment	FALSE	canonical	3	1007	junction_11	108.063189350315	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGAGAAAGAGAAGGA	50	False	NA	-12	True	NA	NA	NA	116874870	116850662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_175394.known	chr8	+	3672	3	FSM	ENSG00000147679.12	ENST00000309822.7	3672	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	20.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATCTCCTTGTACTTC	-10	True	NA	NA	False	ATTAAA	-17	NA	116766523	116774684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_116766792_116770191_116770367_116771455
transcript_175400.known	chr8	+	563	3	FSM	ENSG00000147679.12	ENST00000517814.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACTAAATGCTGAAAAGAT	-26	True	NA	NA	False	NA	NA	NA	116766507	116779586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_116766792_116770191_116770367_116779482
transcript_175401.known	chr8	+	2291	2	FSM	ENSG00000205002.4	ENST00000378279.4	2291	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCTGAGAATTATCTGG	0	True	NA	NA	False	AATAAA	-45	NA	116938206	116944487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_116938568_116942557
transcript_175403.known	chr8	+	500	2	FSM	ENSG00000205002.4	ENST00000523536.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGACAGAGCTTGCAG	31	False	NA	NA	False	NA	NA	NA	116938545	116942922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_116938681_116942557
transcript_175405.known	chr8	+	985	4	FSM	ENSG00000164758.7	ENST00000297347.7	985	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	12.2836838484589	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATTAATGGATTTAC	-16	True	NA	15	True	AATAAA	-21	NA	117520712	117540262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_117521054_117528650_117528810_117530722_117530828_117539882
transcript_175406.known	chr8	-	782	5	FSM	ENSG00000177570.15	ENST00000524796.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.55521678957215	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAAATCTTGCTTTGCT	-6	True	NA	NA	False	AAAAAG	-28	NA	118621949	118197546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_118197733_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_175410.known	chr8	-	2087	5	FSM	ENSG00000164761.9	ENST00000297350.9	2087	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1.80277563773199	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTCTGTTGCTTTT	-1	True	NA	-4	True	ATTAAA	-20	NA	118951885	118923556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_118924763_118926493_118926719_118928737_118928930_118932930_118933301_118951791
transcript_175415.known	chr8	+	2826	4	FSM	ENSG00000147676.14	ENST00000614891.5	2826	4	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_2	207.949245944507	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	-4	True	NA	27	True	AATAAA	-16	NA	119208362	119245673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_119208605_119221586_119221758_119240164_119240321_119243416
transcript_175418.known	chr8	+	892	4	FSM	ENSG00000147676.14	ENST00000531508.1	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	776.346572092645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTAATTTTATTATGAT	326	False	NA	-22	True	NA	NA	NA	119208867	119243648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_119209201_119221586_119221758_119240164_119240321_119243416
transcript_175419.nnic	chr8	+	785	3	NIC	ENSG00000147676.14	novel	2826	4	NA	NA	-10	145	combination_of_known_splicesites	FALSE	canonical	3	183	junction_1	833.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTATCCCTTTTGTTTGG	-14	True	NA	22	True	CATAAA	-26	NA	119208352	119243793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_119208605_119240164_119240321_119243416
transcript_175420.nnic	chr8	+	2665	3	NIC	ENSG00000147676.14	novel	2826	4	NA	NA	-10	0	intron_retention	FALSE	canonical	3	183	junction_1	833.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	-14	True	NA	27	True	AATAAA	-16	NA	119208352	119245673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_119208605_119240164_119240321_119243416
transcript_175421.known	chr8	-	3086	25	FSM	ENSG00000136960.13	ENST00000075322.11	3086	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_24	14.1860161974938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	1	True	NA	-10	True	AATAAA	-17	NA	119638839	119557085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119638747
transcript_175422.nic	chr8	-	3325	25	NIC	ENSG00000136960.13	novel	3271	26	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	10.2854232074113	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTTTATTTGGCTT	90	False	NA	-11	True	AATAAA	-16	NA	119673583	119557086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
transcript_175424.nic	chr8	-	3121	25	NIC	ENSG00000136960.13	novel	3271	26	NA	NA	62	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	11.1522761752428	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTTTATTTGGCTT	-3	True	NA	-11	True	AATAAA	-16	NA	119673391	119557086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582429_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
transcript_175429.known	chr8	-	5027	26	FSM	ENSG00000064313.13	ENST00000378164.7	5027	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	31.9263151647665	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	-3	True	NA	-18	True	AATAAA	-17	NA	119832841	119730773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_175437.nic	chr8	-	2071	14	ISM	ENSG00000064313.13	ENST00000690144.1	5377	26	-3	57302	-1	6372	5prime_fragment	FALSE	canonical	0	0	junction_13	38.6432629981984	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCCAAAAGTAGAAGGTAG	NA	False	NA	-17	True	AAGAAA	-28	NA	119832858	119788353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_175448.known	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_7	19.0394327646598	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-4	True	NA	-40	True	AATAAA	-15	NA	119855894	119833975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
transcript_175456.known	chr8	+	2569	9	FSM	ENSG00000155792.10	ENST00000286234.6	2569	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	6.46988214730377	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCTTTTCATTAGGT	-1	True	NA	18	True	AATAAA	-20	NA	119873721	120050918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_119873969_119928399_119928579_119929814_119929939_119965231_119965411_120001524_120001711_120002976_120003112_120006804_120006876_120009028_120009134_120049575
transcript_175460.known	chr8	+	6163	48	FSM	ENSG00000187955.13	ENST00000309791.8	6163	48	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	15.5369272005655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGGTTATGATTCTAGT	4	True	NA	14	True	AATAAA	-15	NA	120125107	120370917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120370335
transcript_175461.known	chr8	+	8009	48	FSM	ENSG00000187955.13	ENST00000297848.8	8009	48	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_5	15.5711832368967	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTCTTCAGAATTCTC	-2	True	NA	NA	False	AATAAA	-18	NA	120125101	120373573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120371151
transcript_175467.known	chr8	+	3067	22	FSM	ENSG00000172167.8	ENST00000305949.6	3067	22	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	15.613239338151	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGATTTCATGTCTT	1	True	NA	NA	False	AATAAA	-19	NA	120445418	120523636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463691_120463762_120470819_120470938_120488158_120488333_120490462_120490571_120497392_120497555_120502491_120502610_120506705_120506862_120509933_120510030_120515924_120516192_120517850_120518101_120518703_120518818_120522653_120522720_120523297
transcript_175470.nic	chr8	-	945	7	NIC	ENSG00000172172.8	novel	1260	7	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_6	635.067363006127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTAGTGTTGCATTTAA	-1	True	NA	-6	True	AATAAA	-18	NA	120445125	120395846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120444947
transcript_175471.known	chr8	-	1260	7	FSM	ENSG00000172172.8	ENST00000306185.8	1260	7	0	0	0	0	multi-exon	FALSE	canonical	3	1672	junction_1	70.2724855275678	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-2	True	NA	NA	False	NA	NA	NA	120445150	120395436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120445067
transcript_175472.known	chr8	-	1418	6	FSM	ENSG00000172172.8	ENST00000518696.5	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	692.265440420075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-13	True	NA	NA	False	NA	NA	NA	120445402	120395436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120443184_120443309_120445067
transcript_175473.known	chr8	-	633	6	FSM	ENSG00000172172.8	ENST00000518918.1	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	688.908818349715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTTTCCCTTCTTCT	297	False	NA	68	True	AATAGA	-25	NA	120445092	120413990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120444947
transcript_175476.known	chr8	+	1981	4	FSM	ENSG00000172167.8	ENST00000522308.1	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	7.1336448530109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4	True	NA	NA	False	NA	NA	NA	120445421	120452829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170
transcript_175477.known	chr8	-	4240	4	FSM	ENSG00000170961.7	ENST00000303924.5	4240	4	0	0	0	0	multi-exon	FALSE	canonical	3	2489	junction_1	243.028576280422	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTTTTTTTCTAAG	-2	True	NA	-36	True	AATAAA	-16	NA	121641440	121612115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_121615039_121617104_121617207_121628713_121629341_121640852
transcript_175489.known	chr8	+	4361	4	FSM	ENSG00000178764.8	ENST00000314393.6	4361	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	19.8662192343351	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCCTCTACTTCGCCT	3	True	NA	25	True	AATAAA	-24	NA	122781654	122974510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_122781947_122863476_122863540_122951291_122954029_122973241
transcript_175491.known	chr8	+	3478	22	FSM	ENSG00000156787.17	ENST00000287380.6	3478	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_19	52.6221718529513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	-12	True	NA	14	True	AATAAA	-22	NA	123072706	123152153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_175498.nic	chr8	+	2193	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	2	-849	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATCTGCTCTTACTGA	-4	True	NA	4	True	AATAAA	-15	NA	123072714	123103352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_175499.nic	chr8	+	3221	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	23	False	NA	9	True	AATAAA	-33	NA	123072535	123104201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_17550.known	chr1	+	1432	5	FSM	ENSG00000198892.7	ENST00000362011.7	1432	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	7.82623792124926	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCACTGCTAACTGTAC	2	True	NA	NA	False	NA	NA	NA	201888897	201892587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201889068_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_175501.known	chr8	-	3213	8	FSM	ENSG00000136986.10	ENST00000259512.9	3213	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	24.5581359393649	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTGAGGAGTCATAT	-18	True	NA	NA	False	AATGAA	-17	NA	123042302	123013169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_175503.known	chr8	-	1994	8	FSM	ENSG00000136986.10	ENST00000405944.7	1994	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	122.542620657268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTTCACACAGTTAT	230	False	NA	-1	True	AATAAA	-15	NA	123042122	123014148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123015586_123019194_123019246_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_17551.known	chr1	+	914	5	FSM	ENSG00000198892.7	ENST00000464117.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	48.2623041306567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAAGATCCCAGCCAG	2	True	NA	NA	False	NA	NA	NA	201888679	201892137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201888782_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_175514.known	chr8	-	918	4	FSM	ENSG00000136986.10	ENST00000419562.6	918	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	150.851656345637	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGGTTTTAGCGGGT	-18	True	NA	36	True	NA	NA	NA	123042302	123015164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123041969
transcript_175517.known	chr8	-	1310	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	13.6879509058149	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTGCATTCAGTTTA	-17	True	NA	-19	True	TATAAA	-43	NA	123241377	123219966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_175519.nic	chr8	-	1235	6	NIC	ENSG00000189376.12	novel	948	5	NA	NA	-30	167	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	71.0588488507941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTGTGTAGCAGTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	123241407	123226192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_123226419_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_175525.known	chr8	-	4899	4	FSM	ENSG00000165156.15	ENST00000395571.8	4899	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12.0369800568452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGACCTTTTTTTTTTCA	-5	True	NA	NA	False	AATAAA	-20	NA	123274286	123248455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123250321_123253321_123256172_123267272_123267387_123274216
transcript_175527.known	chr8	-	1114	3	FSM	ENSG00000165156.15	ENST00000522595.5	1114	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAACCAGACAATCTTT	1036	False	NA	NA	False	NA	NA	NA	123274484	123255534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123256172_123267272_123267387_123274121
transcript_175533.known	chr8	-	948	5	FSM	ENSG00000189376.12	ENST00000521310.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	14.2894191624432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTATCCCTCGGGTTTA	16	True	NA	NA	False	NA	NA	NA	123241344	123226497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_175534.known	chr8	-	5547	28	FSM	ENSG00000156802.13	ENST00000287394.10	5547	28	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_18	20.3469899493758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	-5	True	NA	0	True	AATAAA	-26	NA	123396447	123319849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372_123336533_123337624_123337822_123339310_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_175539.nic	chr8	-	756	5	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-73	26723	-27	1426	5prime_fragment	FALSE	canonical	3	182	junction_3	14.4048602908879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATATTCTTCCATTA	4	True	NA	NA	False	AATGAA	-10	NA	123396474	123371235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_175540.nic	chr8	-	462	3	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-73	28149	-27	0	5prime_fragment	FALSE	canonical	3	182	junction_1	3.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGCACAG	4	True	NA	NA	False	AATATA	-27	NA	123396474	123372661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_123372687_123380528_123380678_123396186
transcript_175542.nic	chr8	-	400	2	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-73	36053	-27	-7904	5prime_fragment	FALSE	canonical	3	189	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAGCAACTTGCTAAT	4	True	NA	3	True	NA	NA	NA	123396474	123380565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_123380678_123396186
transcript_175543.known	chr8	+	949	7	FSM	ENSG00000156795.8	ENST00000519199.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	54.230219127961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGTCAAATTGAAACTT	-1	True	NA	19	True	TATAAA	-26	NA	123416800	123441596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_175544.known	chr8	+	1491	6	FSM	ENSG00000156795.8	ENST00000523984.5	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	35.1965907439911	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	0	True	NA	NA	False	NA	NA	NA	123416725	123442240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_175545.known	chr8	+	1519	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	18.1835090122891	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	-28	True	NA	NA	False	NA	NA	NA	123416773	123442240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_175546.known	chr8	+	5529	24	FSM	ENSG00000176853.16	ENST00000334705.12	5529	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_14	12.5936942243133	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAATTTTCTGAAAG	-40	True	NA	33	True	AATAAA	-30	NA	123768438	123815452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123768775_123774079_123774165_123775146_123775299_123777264_123777323_123778024_123778093_123778658_123778773_123779984_123780076_123780479_123780543_123784469_123784577_123785080_123785120_123785628_123785742_123786494_123786611_123787260_123787374_123787663_123787751_123789612_123789746_123798089_123798239_123799519_123799655_123799771_123799886_123805266_123805340_123806079_123806230_123808271_123808377_123808892_123809017_123810281_123810352_123812518
transcript_175552.known	chr8	-	1767	1	FSM	ENSG00000245149.5	ENST00000530778.1	1767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGCTTCAGTCTTTA	-26	True	NA	NA	False	AATAAA	-30	NA	124474576	124472809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124472800_124474600
transcript_175553.known	chr8	-	2777	15	FSM	ENSG00000170873.19	ENST00000325064.9	2777	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	12.9046740464414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATCTTTTAATTTGTA	674	False	NA	NA	False	ATTAAA	-24	NA	124728273	124552812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124553693_124555741_124555905_124556231_124556406_124557680_124557876_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124580550_124580563_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
transcript_175555.known	chr8	-	4994	14	FSM	ENSG00000170873.19	ENST00000518547.6	4994	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	8.58304369400823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTTCAAGTCTTG	-5	True	NA	-12	True	AATAAA	-20	NA	124728473	124550783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124553693_124555741_124555905_124556231_124556406_124557680_124557876_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
transcript_17556.known	chr1	-	3927	3	FSM	ENSG00000163431.13	ENST00000367288.5	3927	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTTGTTTGTTGGT	-20	True	NA	NA	False	AATAAA	-13	NA	201946548	201896455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201898399_201899236_201900752_201946079
transcript_175561.nic	chr8	-	2727	13	NIC	ENSG00000170873.19	novel	4994	14	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	7.02525207139692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGAATATAGCTCTTTTG	442	False	NA	NA	False	AATAAA	-21	NA	124728505	124552887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_124553693_124555741_124555905_124556231_124556406_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
transcript_175564.nic	chr8	-	966	5	ISM	ENSG00000170873.19	ENST00000325064.9	2777	15	-308	36852	-108	0	5prime_fragment	FALSE	canonical	3	35	junction_4	1.11803398874989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAGAAAGTGGCCAAC	366	False	NA	NA	False	GATAAA	-24	NA	124728581	124589664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
transcript_175566.known	chr8	-	707	3	FSM	ENSG00000170873.19	ENST00000472084.2	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTGGGTTGTATCTAT	929	False	NA	NA	False	CATAAA	-26	NA	124728018	124699089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124699600_124704129_124704192_124727883
transcript_175571.known	chr8	-	1029	12	FSM	ENSG00000147687.19	ENST00000276692.11	1029	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_10	48.0462931035448	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-14	True	NA	NA	False	AATAAA	-25	NA	124539085	124488497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_175576.known	chr8	-	915	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	128.569431691332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATACTATATATCGG	-17	True	NA	NA	False	AATAAA	-22	NA	124539088	124488500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
transcript_175578.known	chr8	-	726	9	FSM	ENSG00000147687.19	ENST00000605953.5	726	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_7	46.3530945568902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTTTGCATTG	-11	True	NA	-30	True	ATTAAA	-1	NA	124539082	124504173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_175581.known	chr8	+	1423	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	1300.3032979527	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATACAGGACTTTTT	37	True	NA	NA	False	NA	NA	NA	124539177	124550768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
transcript_175582.known	chr8	+	636	4	FSM	ENSG00000147684.10	ENST00000517367.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1413.33246855319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATGACTGACGTTC	3	True	NA	15	True	AATAAA	-17	NA	124539143	124549978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124539288_124543119_124543280_124546999_124547114_124549760
transcript_175584.known	chr8	+	3199	2	FSM	ENSG00000170881.5	ENST00000303545.4	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATTGTTATATAGTGT	-3	True	NA	NA	False	NA	NA	NA	124474879	124488618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124475291_124485830
transcript_175587.known	chr8	+	2962	11	FSM	ENSG00000104549.12	ENST00000265896.10	2962	11	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_1	37.4460945894228	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTCTTTTTGTTTC	0	True	NA	14	True	AATAAA	-13	NA	124998504	125022283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124999695_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_17560.known	chr1	+	1650	6	FSM	ENSG00000134375.11	ENST00000367287.5	1650	6	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	50.4396669299075	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTGTATAATTCAG	-8	True	NA	NA	False	CATAAA	-18	NA	201955502	201970664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201963615_201963745_201965432_201965544_201969468
transcript_175601.known	chr8	+	1879	11	FSM	ENSG00000104549.12	ENST00000523430.5	1879	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	299.118120480856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCGTGTCTTTTTGTT	NA	False	NA	12	True	AATAAA	-11	NA	124998496	125022281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124998606_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_175604.known	chr8	+	1188	8	FSM	ENSG00000156831.8	ENST00000287437.8	1188	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	30.5654199702733	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	5	True	NA	11	True	AATAAA	-17	NA	125091859	125367120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_175605.nic	chr8	+	1225	8	NIC	ENSG00000156831.8	novel	1188	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	51.6601927039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	5	True	NA	11	True	AATAAA	-17	NA	125091859	125367120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_175606.known	chr8	+	1037	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	49.340371119624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGTTCTATAATG	15	True	NA	-34	True	AAAACA	-42	NA	125091869	125367075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_175610.known	chr8	+	848	5	FSM	ENSG00000156831.8	ENST00000519010.5	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	75.579014944626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGGGAAATTGGGAAAAC	-11	True	NA	NA	False	NA	NA	NA	125091843	125182519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091901_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_175611.known	chr8	+	1183	5	FSM	ENSG00000156831.8	ENST00000520866.5	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	38.1469199280886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTTAGTGGACATAA	-11	True	NA	NA	False	AATAAA	-12	NA	125091843	125182796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_175618.known	chr8	-	4139	29	FSM	ENSG00000164961.16	ENST00000318410.12	4139	29	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_17	38.9297345828851	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCTCGCTTATGATTCA	-26	True	NA	-1	True	AGTAAA	-22	NA	125091792	125024259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
transcript_175619.nic	chr8	-	3803	28	NIC	ENSG00000164961.16	novel	4139	29	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_27	65.3189914551564	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAAGTCGTCTCGCTTA	-7	True	NA	-8	True	AGTAAA	-15	NA	125091773	125024266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125091614
transcript_175627.known	chr8	-	3667	27	FSM	ENSG00000164961.16	ENST00000517845.5	3667	27	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_26	74.3215069177997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAAGTCGTCTCGCTTA	-17	True	NA	-8	True	AGTAAA	-15	NA	125091783	125024266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125091614
transcript_175628.known	chr8	+	3596	3	FSM	ENSG00000173334.4	ENST00000311922.4	3596	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	10.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGTGAATTTCTTT	2	True	NA	15	True	AATAAA	-15	NA	125430357	125438403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125431263_125433316_125433610_125436005
transcript_175633.nnic	chr8	-	2520	2	FSM	ENSG00000168672.4	ENST00000517458.1	844	2	-1402	-274	-90	-98	multi-exon	FALSE	canonical	3	102	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCCTCTTCACTATG	651	False	NA	-4	True	AATAAA	-21	NA	126557821	126552540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_126553504_126556264
transcript_175639.nic	chr8	-	2772	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	-86	-41	intron_retention	FALSE	canonical	3	102	junction_1	101	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTATGAGCGTTTCCAA	NA	False	NA	-6	True	AATAAA	-23	NA	126558564	126552483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_126553504_126556264_126557486_126558033
transcript_175641.nic	chr8	-	2659	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	-26	-94	intron_retention	FALSE	canonical	3	102	junction_1	101	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCACTATGTCTT	NA	False	NA	0	True	AATAAA	-25	NA	126558504	126552536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_126553504_126556264_126557486_126558033
transcript_175642.nnic	chr8	-	5339	3	NNC	ENSG00000168672.4	novel	5488	2	NA	NA	0	-95	intron_retention	TRUE	non_canonical	0	0	junction_1	152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTTCACTATGTCT	-6	True	NA	-1	True	AATAAA	-24	NA	126558478	126552537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_126557180_126557233_126557486_126558033
transcript_175644.nic	chr8	-	2295	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	0	26	intron_retention	FALSE	canonical	3	102	junction_1	101	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCGAATGGATTTGTTTG	-6	True	NA	-11	True	AATAAA	-19	NA	126558478	126552874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_126553504_126556264_126557486_126558033
transcript_175645.nic	chr8	-	2183	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	38	-48	intron_retention	FALSE	canonical	3	102	junction_1	101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTGATATCATGTGCT	-2	True	NA	-30	True	AATAAA	-21	NA	126558440	126552948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_126553504_126556264_126557486_126558033
transcript_175646.known	chr8	-	5488	2	FSM	ENSG00000168672.4	ENST00000304916.4	5488	2	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTTTTTCCACTTGA	-6	True	NA	-19	True	AATAAA	-18	NA	126558478	126552442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_126557486_126558033
transcript_175649.known	chr8	-	4831	1	FSM	ENSG00000168672.4	ENST00000652209.1	4831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAAATATAGTTGTGA	11	True	NA	18	True	TATAAA	-3	NA	126557731	126552900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_126552900_126557700
transcript_175653.known	chr8	+	3721	3	FSM	ENSG00000136997.21	ENST00000621592.8	3721	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	65.5	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACTCCTAGAATAATC	-2	True	NA	NA	False	AATAAA	-17	NA	127736230	127742951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127736624_127738247_127739020_127740395
transcript_175663.known	chr8	+	2042	3	FSM	ENSG00000136997.21	ENST00000259523.10	2042	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTCTGCTGGAGGCC	-3	True	NA	NA	False	NA	NA	NA	127735433	127740477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127736624_127738247_127739020_127740397
transcript_175675.known	chr8	+	1701	9	FSM	ENSG00000249859.13	ENST00000667305.1	1701	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	30.5122926047847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-13	True	NA	38	True	ATTAAA	-18	NA	127794525	128101256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128070159_128070273_128096517_128096655_128100979
transcript_175681.known	chr8	+	1581	8	FSM	ENSG00000249859.13	ENST00000657289.1	1581	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	35.26112503559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-6	True	NA	38	True	ATTAAA	-18	NA	127794532	128101256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_175684.known	chr8	+	1410	7	FSM	ENSG00000249859.13	ENST00000665737.1	1410	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	25.9914515861572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	20	True	NA	36	True	ATTAAA	-16	NA	127794558	128101254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_175686.known	chr8	+	1321	6	FSM	ENSG00000249859.13	ENST00000670223.1	1321	6	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	32.9581552881832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-2	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
transcript_175687.known	chr8	+	1275	6	FSM	ENSG00000249859.13	ENST00000653522.1	1275	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	30.348640826238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-12	True	NA	38	True	ATTAAA	-18	NA	127794526	128101256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_175691.known	chr8	+	1017	5	FSM	ENSG00000249859.13	ENST00000656880.1	1017	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	32.1510108705776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTAAGTGCCATCCTC	-2	True	NA	NA	False	CATAAA	-30	NA	127794536	127996670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_127996560
transcript_175693.known	chr8	+	1152	5	FSM	ENSG00000249859.13	ENST00000662766.1	1152	5	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	38.4602067077128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-2	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128096517_128096655_128100979
transcript_175696.nic	chr8	+	3755	4	ISM	ENSG00000249859.13	ENST00000665721.1	1162	5	-204	3202	-30	1733	5prime_fragment	FALSE	canonical	3	55	junction_3	11.8977121983832	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCAGGCACAGTGG	414	False	NA	NA	False	AAAAAG	-9	NA	127794495	127992098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161
transcript_175699.known	chr8	+	861	3	FSM	ENSG00000249859.13	ENST00000664214.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTATCTTATAAT	-12	True	NA	NA	False	AATAAA	-28	NA	127794526	127932707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127932464
transcript_175701.nic	chr8	+	3586	3	ISM	ENSG00000249859.13	ENST00000667539.1	1041	5	-59	4572	-30	1733	5prime_fragment	FALSE	canonical	3	37	junction_2	19.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCAGGCACAGTGG	414	False	NA	NA	False	AAAAAG	-9	NA	127794495	127992098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_127794735_127890588_127890999_127989161
transcript_175713.known	chr8	-	1968	14	FSM	ENSG00000153310.20	ENST00000523509.5	1968	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	452.208675713472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-5	True	NA	-6	True	AATAAA	-22	NA	130016405	129841469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129896671_129896855_129903311_129903351_129970942_129970996_130016369
transcript_175715.nic	chr8	-	2172	14	NIC	ENSG00000153310.20	novel	2024	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_12	350.52040769835	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-6	True	AATAAA	-22	NA	130016705	129841469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016369
transcript_175716.known	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	375.780702131808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-6	True	AATAAA	-22	NA	130016672	129841469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
transcript_175723.known	chr8	-	2021	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_12	261.821451035285	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCAGCTTTCATT	22	False	NA	-33	True	NA	NA	NA	129939872	129841496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
transcript_175725.known	chr8	-	1817	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_11	346.578514433118	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-5	True	NA	-20	True	AATAAA	-8	NA	130016451	129841483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
transcript_175734.known	chr8	-	3798	12	FSM	ENSG00000153310.20	ENST00000519824.6	3798	12	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_11	212.971538082106	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACTCATTTGTTGACA	-41	True	NA	-9	True	AATAAA	-18	NA	129939832	129839592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129939607
transcript_175740.nic	chr8	-	1912	12	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	384	junction_11	293.338097882668	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-28	True	NA	-6	True	AATAAA	-22	NA	129939819	129841469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_175749.nic	chr8	-	1827	11	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	425	junction_9	249.174416824842	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-30	True	NA	-6	True	AATAAA	-22	NA	129939821	129841469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129939607
transcript_175751.known	chr8	-	1700	11	FSM	ENSG00000153310.20	ENST00000522941.5	1700	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	396.234728412339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAAATAAAAATCAGCT	45	True	NA	-39	True	NA	NA	NA	129939746	129841502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_175753.known	chr8	-	1647	10	FSM	ENSG00000153310.20	ENST00000522250.5	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	340.862558739761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	200	False	NA	-20	True	AATAAA	-8	NA	129939694	129841483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129939607
transcript_17576.known	chr1	+	2399	11	FSM	ENSG00000176393.11	ENST00000295640.9	2399	11	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	48.5423526417911	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACGGATTGAGTGACTAT	8	True	NA	20	True	AATAAA	-20	NA	201982647	202006143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201983114_201988903_201989045_201989382_201989532_201996146_201996264_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_175762.known	chr8	-	554	2	FSM	ENSG00000153310.20	ENST00000518344.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATTGAAAACAGAAGGGA	20	True	NA	NA	False	TTTAAA	-28	NA	129939771	129902960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129903351_129939607
transcript_175763.known	chr8	-	6259	30	FSM	ENSG00000153317.15	ENST00000518721.6	6259	30	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_28	15.353542662685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAATCAGGCCATTT	-39	True	NA	-14	True	AATAAA	-23	NA	130443674	130052103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_130054806_130057953_130058077_130060578_130061070_130076347_130076407_130079901_130079972_130091972_130092144_130112093_130112323_130115627_130115736_130116677_130116746_130116879_130116996_130118160_130118247_130118488_130118676_130124012_130124105_130125955_130126090_130127926_130128091_130134295_130134345_130136950_130137039_130152735_130152806_130159863_130159965_130167535_130167623_130168991_130169068_130179263_130179350_130180750_130180881_130187235_130187286_130188108_130188184_130214555_130214702_130236921_130236995_130358016_130358144_130401884_130401971_130443459
transcript_175767.nic	chr8	-	957	7	ISM	ENSG00000153317.15	ENST00000518721.6	6259	30	-188	135135	-188	-6372	5prime_fragment	FALSE	canonical	3	65	junction_5	19.1434642168606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAAGTGGTTTTTTGTT	-3	True	NA	-3	True	NA	NA	NA	130443862	130187238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_130187286_130188108_130188184_130214555_130214702_130236921_130236995_130358016_130358144_130401884_130401971_130443459
transcript_175768.known	chr8	-	4421	18	FSM	ENSG00000155897.10	ENST00000286355.10	4421	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	9.24109971136729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGGTTTCGTTGGTCTTT	1	True	NA	NA	False	AATAAA	-37	NA	131040909	130780300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_130780878_130783690_130783806_130785382_130785476_130800425_130800573_130814068_130814228_130821341_130821421_130836276_130836450_130847423_130847514_130849601_130849804_130867845_130867947_130884563_130884762_130903771_130904043_130909707_130909867_130937072_130937201_130943350_130943463_130951867_130951999_130990392_130990543_131039373
transcript_175770.nic	chr8	-	3445	7	ISM	ENSG00000155897.10	ENST00000286355.10	4421	18	-651	123164	-651	307	5prime_fragment	FALSE	canonical	3	26	junction_1	6.64371047599825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTCATGTTGGAAAAAAT	-1	True	NA	NA	False	NA	NA	NA	131041560	130903464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_130904043_130909707_130909867_130937072_130937201_130943350_130943463_130951867_130951999_130990392_130990543_131039373
transcript_175773.known	chr8	+	884	5	FSM	ENSG00000253507.6	ENST00000524275.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	388.892658711887	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTTCATTGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	131308544	131317632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_131308672_131310552_131310713_131312555_131312730_131315759_131315884_131317333
transcript_175778.known	chr8	+	731	4	FSM	ENSG00000253507.6	ENST00000519005.1	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_2	212.39167173461	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAACTGAGGACAACAA	7	False	NA	NA	False	NA	NA	NA	131310471	131317506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_131310713_131312555_131312749_131315759_131315884_131317333
transcript_175780.nnic	chr8	+	689	3	NNC	ENSG00000253507.6	novel	884	5	NA	NA	-11	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_2	529	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-4	True	NA	27	True	AATAAA	-22	NA	131310460	131315811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_131310713_131312555_131312730_131315548
transcript_175782.nnic	chr8	+	708	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	-11	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_2	499.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-4	True	NA	27	True	AATAAA	-22	NA	131310460	131315811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_131310713_131312555_131312749_131315548
transcript_175784.nnic	chr8	+	996	3	NIC	ENSG00000253507.6	novel	731	4	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	557	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTATTTGCCTGTTT	-4	True	NA	28	True	AATAAA	-17	NA	131310460	131317884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_131310713_131312555_131312749_131317333
transcript_175788.known	chr8	+	5433	23	FSM	ENSG00000132294.15	ENST00000254624.10	5433	23	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	36.911022116964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGCTTCTTTTGAGCC	-20	True	NA	71	True	ATTAAA	-29	NA	131904092	132013642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_131904323_131940498_131940576_131944744_131944873_131946482_131946634_131949968_131950091_131953817_131953968_131955767_131955906_131959584_131959664_131968294_131968431_131970475_131970644_131976026_131976142_131977040_131977093_131978846_131979020_131979345_131979422_131984138_131984301_131984928_131985061_131986193_131986262_131987574_131987703_131996405_131996498_132001758_132001808_132002602_132002707_132003235_132003286_132010789
transcript_175793.nic	chr8	+	1801	14	ISM	ENSG00000132294.15	ENST00000254624.10	5433	23	-38	34253	-38	-21567	5prime_fragment	TRUE	canonical	3	172	junction_4	30.4807631642799	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGACAAGACACAAGT	NA	False	NA	-22	True	GATAAA	-12	NA	131904054	131979389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_131904323_131940498_131940576_131944744_131944873_131946482_131946634_131949968_131950091_131953817_131953968_131955767_131955906_131959584_131959664_131968294_131968431_131970475_131970644_131976026_131976142_131977040_131977093_131978846_131979020_131979345
transcript_175813.known	chr8	-	3343	12	FSM	ENSG00000129295.10	ENST00000620350.5	3343	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.61577310586391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTATGGACTGAATAAT	3	True	NA	NA	False	ATTAAA	-18	NA	132675545	132570415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_132572481_132583693_132583780_132610165_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_175816.known	chr8	-	1736	12	FSM	ENSG00000129295.10	ENST00000519595.5	1736	12	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_2	5.20171618215272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAAGATCATAGAACT	-9	True	NA	NA	False	AATAAA	-19	NA	132675592	132572069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_132572481_132583693_132583776_132610161_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_175819.nic	chr8	+	2085	14	ISM	ENSG00000129292.21	ENST00000395386.7	6233	21	-46	23436	-16	0	5prime_fragment	FALSE	canonical	3	11	junction_5	44.2521018790075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACTGAGATGATT	-42	True	NA	NA	False	AAAAAG	-23	NA	132775341	132825371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132799094_132799173_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263
transcript_175820.nic	chr8	+	2025	13	ISM	ENSG00000129292.21	ENST00000220847.8	3297	20	-38	20552	-38	0	5prime_fragment	FALSE	canonical	3	96	junction_12	22.8235988982164	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACTGAGATGATT	NA	False	NA	NA	False	AAAAAG	-23	NA	132775319	132825371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263
transcript_175822.nic	chr8	+	2007	13	NIC	ENSG00000129292.21	novel	6233	21	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	26.5167661846027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACTGAGATGATT	-42	True	NA	NA	False	AAAAAG	-23	NA	132775341	132825371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263
transcript_175824.nic	chr8	+	1914	12	ISM	ENSG00000129292.21	ENST00000220847.8	3297	20	-38	21866	-38	0	5prime_fragment	FALSE	canonical	3	103	junction_11	21.8178030270149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGTATGAACAGAAAGTAA	NA	False	NA	NA	False	AAAAAG	-31	NA	132775319	132824057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003
transcript_175829.nic	chr8	+	1879	11	ISM	ENSG00000129292.21	ENST00000220847.8	3297	20	-38	28359	-38	-1406	5prime_fragment	FALSE	canonical	3	105	junction_10	21.1586861595894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCCTATAAGTAGATAAG	NA	False	NA	NA	False	AATAAA	-1	NA	132775319	132817564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338
transcript_175830.known	chr8	+	3237	11	FSM	ENSG00000129292.21	ENST00000361997.9	3237	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	38.4760964756042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAACTAAGAGTCTTAC	-9	True	NA	NA	False	AATATA	-20	NA	132775374	132818970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804611_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338
transcript_175831.known	chr8	+	2236	9	FSM	ENSG00000129292.21	ENST00000395376.5	2236	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	61.2758873864753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGTCAATCTTTGAT	196	False	NA	NA	False	AATAAA	-19	NA	132775579	132812316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132799082_132799173_132803818_132804033_132804611_132804741_132811045
transcript_175832.known	chr8	+	2311	8	FSM	ENSG00000129292.21	ENST00000337920.8	2311	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	18.5505377005518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGTCAATCTTTGAT	24	True	NA	NA	False	AATAAA	-19	NA	132775407	132812316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045
transcript_175837.known	chr8	+	1810	5	FSM	ENSG00000129292.21	ENST00000485595.5	1810	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	21.1009478460092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGATTTCTTGGTTA	14	True	NA	NA	False	AATAAA	-20	NA	132775397	132799960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771
transcript_175840.known	chr8	-	2995	9	FSM	ENSG00000155926.14	ENST00000338087.10	2995	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.3228756555323	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGGAGAGTTTCTGGGT	1	True	NA	-1	True	AATAAA	-17	NA	133102602	133036727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133038738_133039997_133040131_133044983_133045116_133047829_133047934_133049901_133049989_133050815_133050916_133060099_133060201_133074852_133075131_133102552
transcript_175841.known	chr8	-	3025	16	FSM	ENSG00000104419.17	ENST00000323851.13	3025	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	1.92757763930679	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTTGTGTCTTTTTTCT	0	True	NA	-5	True	AATAAA	-15	NA	133297252	133237174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133239120_133242022_133242075_133244354_133244391_133246615_133246664_133247874_133247927_133248714_133248772_133250439_133250544_133254538_133254596_133256776_133256864_133258365_133258427_133259167_133259231_133262046_133262168_133264546_133264653_133280231_133280268_133284248_133284330_133297133
transcript_175843.known	chr8	-	6715	10	FSM	ENSG00000008513.16	ENST00000522652.6	6715	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	6.12825877028341	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGTTTGTTGCTTTT	-8	True	NA	-1	True	AATAAA	-21	NA	133571887	133454847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476075_133476277_133476601_133499134_133499190_133545773_133545927_133571692
transcript_175847.known	chr8	-	6951	9	FSM	ENSG00000008513.16	ENST00000521180.5	6951	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	6.48074069840786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGGTGTGTTTGTTG	14	True	NA	-6	True	AATAAA	-16	NA	133571925	133454852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476601_133499134_133499190_133545773_133545927_133571692
transcript_175849.nic	chr8	-	2483	8	NIC	ENSG00000008513.16	novel	2906	12	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	3.49343407446785	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAACTTGGCACCGTGT	-19	True	NA	NA	False	AAAAAG	-14	NA	133489733	133458872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476075_133476277_133476601_133489537
transcript_175851.nic	chr8	-	2119	8	NIC	ENSG00000008513.16	novel	2906	12	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	6.32132768281074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAACTTGGCACCGTGT	-1	True	NA	NA	False	AAAAAG	-14	NA	133571995	133458872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133499134_133499190_133545773_133545927_133571692
transcript_175853.nic	chr8	-	2686	7	NIC	ENSG00000008513.16	novel	2906	12	NA	NA	-33	0	intron_retention	FALSE	canonical	3	14	junction_3	3.63623737154524	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAACTTGGCACCGTGT	-19	True	NA	NA	False	AAAAAG	-14	NA	133489733	133458872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476601_133489537
transcript_175857.known	chr8	-	4594	16	FSM	ENSG00000066827.16	ENST00000377838.8	4594	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	3.02875111776015	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGTTCTTCAGGCGG	-4	True	NA	-3	True	AATAAA	-18	NA	134713031	134477787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_134478722_134509618_134509750_134512474_134512602_134520882_134521002_134532833_134532973_134565332_134565422_134583831_134584006_134588245_134588396_134590267_134590356_134600435_134600669_134601476_134602934_134608728_134608880_134610469_134610656_134637460_134637713_134657560_134657738_134712844
transcript_175858.known	chr8	+	1978	9	FSM	ENSG00000131773.14	ENST00000355849.10	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	11.9576074111839	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGAGCTAAC	1	True	NA	14	True	AATAAA	-14	NA	135457455	135647610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_135457955_135521236_135521356_135542653_135542771_135548753_135548901_135557447_135557588_135581877_135582074_135606954_135607038_135645058_135645118_135646992
transcript_175861.nic	chr8	-	2742	15	ISM	ENSG00000169436.17	ENST00000303045.11	6394	65	-43	189672	-43	0	5prime_fragment	FALSE	canonical	3	7	junction_3	3.68117106477861	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGTGTATGAGGAACAAA	-4	True	NA	NA	False	AATAAA	-17	NA	138914084	138777906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_138778407_138779508_138779563_138780926_138780981_138796818_138796858_138802871_138802935_138807767_138807813_138811798_138811922_138812938_138813020_138821135_138821412_138826657_138826782_138833038_138833151_138844083_138844159_138877749_138878317_138883081_138883245_138913618
transcript_175864.known	chr8	-	6899	23	FSM	ENSG00000167632.18	ENST00000438773.4	6899	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.8471431422533	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGGACCTGTAGATGGTT	-1	True	NA	NA	False	AATAGA	-15	NA	140457744	139727724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140426614_140426642_140435111_140435241_140439051_140439198_140450789_140451384_140457638
transcript_175865.known	chr8	-	7092	23	FSM	ENSG00000167632.18	ENST00000648948.2	7092	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.3642368729427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGGACCTGTAGATGGTT	NA	False	NA	NA	False	AATAGA	-15	NA	140458579	139727724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140426614_140426642_140435111_140435241_140439051_140439198_140450789_140451384_140458280
transcript_175870.known	chr8	-	3693	21	FSM	ENSG00000167632.18	ENST00000520857.5	3693	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.516849031718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTCCCTGCATCTG	7604	False	NA	-16	True	AATAAA	-16	NA	140450930	139730344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140435111_140435241_140439051_140439198_140450789
transcript_175877.known	chr8	+	2481	3	FSM	ENSG00000104472.10	ENST00000220913.10	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	46.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTTTGGTGGCCTGTC	-7	True	NA	4	True	ATTAAA	-23	NA	140511321	140517154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_140511647_140514368_140514496_140515125
transcript_175878.known	chr8	+	811	3	FSM	ENSG00000104472.10	ENST00000519618.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	150	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAAGATCTGTACATA	-8	True	NA	NA	False	AATATA	-6	NA	140511981	140515765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_140512026_140514368_140514496_140515125
transcript_175881.known	chr8	+	1678	2	FSM	ENSG00000104472.10	ENST00000519533.1	1678	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAAAGTTTATAA	-18	True	NA	NA	False	NA	NA	NA	140511310	140516467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_140511647_140515125
transcript_175882.known	chr8	-	14595	19	FSM	ENSG00000123908.12	ENST00000220592.10	14595	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_10	11.9747677108324	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCTCTTCCAAAAATCT	6	True	NA	-12	True	AATAAA	-17	NA	140635633	140520155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140532153_140532415_140532616_140535467_140535570_140539319_140539455_140541163_140541359_140544212_140544304_140547467_140547628_140549113_140549299_140551302_140551437_140555895_140556019_140556166_140556287_140557088_140557237_140558484_140558573_140559394_140559530_140560373_140560511_140562452_140562635_140572811_140572933_140585118_140585312_140635484
transcript_175889.known	chr8	-	4388	33	FSM	ENSG00000169398.19	ENST00000519993.5	4388	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.540206477717	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTTGTTGTAATATC	699	False	NA	-23	True	ATTAAA	-15	NA	141001379	140658404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140762367_140762389_140764233_140764291_140769574_140769593_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_141001124
transcript_175890.nic	chr8	-	4519	33	NIC	ENSG00000169398.19	novel	4414	33	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	130.232810615979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTGTAATATCCTT	788	False	141001312	-20	True	ATTAAA	-18	NA	141001290	140658401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
transcript_175897.known	chr8	-	4955	32	FSM	ENSG00000169398.19	ENST00000522684.5	4955	32	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_31	82.777022052093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATCTTTGGATCTGTG	26	True	NA	NA	False	AATACA	-21	NA	141001233	140657899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
transcript_175901.nic	chr8	-	4442	31	NIC	ENSG00000169398.19	novel	4405	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	237	junction_30	63.1744410343297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTGTAATATCCTT	1	True	NA	-20	True	ATTAAA	-18	NA	141001311	140658401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_141001124
transcript_175903.known	chr8	-	4415	31	FSM	ENSG00000169398.19	ENST00000395218.3	4415	31	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	113.549793287155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTGTTTCTTC	-1	True	NA	0	True	ATTAAA	-38	NA	141001313	140658381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
transcript_175910.known	chr8	-	602	4	FSM	ENSG00000169398.19	ENST00000520045.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	167.113401284544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTGGAAGTAAGATAC	-26	True	NA	NA	False	NA	NA	NA	141001285	140879481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140879638_140890542_140890770_140948665_140948724_141001124
transcript_175911.known	chr8	-	571	4	FSM	ENSG00000169398.19	ENST00000520892.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	154.635054240622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGATTTCTTTTGCTT	1141	False	NA	NA	False	NA	NA	NA	141000937	140879440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140879638_140890542_140890770_140925660_140925750_141000879
transcript_175913.known	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	79	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-25	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140879638_140890542_140890770_141001124
transcript_175918.known	chr8	+	5527	23	FSM	ENSG00000105339.11	ENST00000519811.6	5527	23	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_19	4.19464436183975	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCCGGCTCCTTACT	-7	True	NA	NA	False	AATAAA	-17	NA	141128588	141195804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141128810_141136508_141136792_141138021_141138138_141141202_141141325_141144147_141144260_141150833_141150954_141151618_141151838_141155848_141155971_141160631_141160788_141163332_141163430_141165185_141165290_141166189_141166390_141168003_141168526_141175199_141175460_141176590_141176762_141178066_141178197_141180746_141180855_141185138_141185279_141188985_141189147_141190283_141190418_141192330_141192450_141192525_141192664_141194032
transcript_175924.known	chr8	-	1564	2	FSM	ENSG00000204882.4	ENST00000377741.4	1564	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAAGATTATTTAGGTG	-3	True	NA	NA	False	AAAAAG	-14	NA	141367286	141356469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_141357948_141367200
transcript_17595.known	chr1	+	2282	10	FSM	ENSG00000176393.11	ENST00000367286.7	2282	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	176.44143574261	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	12	True	NA	24	True	AATAAA	-24	NA	201982651	202006147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201983114_201988903_201989045_201989382_201989532_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_175957.nnic	chr8	+	1905	6	NNC	ENSG00000184489.13	novel	2849	6	NA	NA	-36	0	intron_retention	FALSE	canonical	3	23	junction_2	68.2952414154896	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	NA	False	NA	16	True	AATAAA	-13	NA	141391958	141431520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_141392085_141421387_141422274_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_175960.known	chr8	+	2849	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	34.2029238516241	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	-3	True	NA	8	True	AGTAAA	-21	NA	141392020	141432454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_175970.nnic	chr8	+	2136	6	NNC	ENSG00000184489.13	novel	1899	5	NA	NA	-175	0	intron_retention	FALSE	canonical	3	15	junction_1	71.4014005464879	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	1588	False	NA	16	True	AATAAA	-13	NA	141417733	141431520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_141418019_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_175974.known	chr8	+	1866	5	FSM	ENSG00000184489.13	ENST00000520105.5	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	76.3392919799496	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	-29	True	NA	16	True	AATAAA	-13	NA	141391994	141431520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141430926
transcript_175979.known	chr8	+	1899	5	FSM	ENSG00000184489.13	ENST00000681443.1	1899	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	95.4175036353394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	9	True	NA	16	True	AATAAA	-13	NA	141417908	141431520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141418032_141421387_141422346_141425047_141425141_141426938_141427070_141430926
transcript_175983.known	chr8	+	2961	3	FSM	ENSG00000271959.1	ENST00000606664.1	2961	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACACTTTCTGAGCATCT	3376	False	NA	NA	False	ATTAAA	-30	NA	141434544	141437954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141437066_141437325_141437521_141437709
transcript_175986.nic	chr8	-	3235	14	NIC	ENSG00000171045.16	novel	1914	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	14.571594317258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTGGTACTGTATGG	-13	True	NA	9	True	TATAAA	-37	NA	142403171	142270474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_142271692_142274780_142274864_142279859_142280325_142284412_142284486_142300485_142300645_142314383_142314441_142315002_142315093_142318543_142318635_142330900_142330971_142331753_142331832_142343965_142344473_142345742_142345893_142354636_142354764_142403103
transcript_17599.known	chr1	+	2093	10	FSM	ENSG00000176393.11	ENST00000471105.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	208.169268732069	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	272	False	NA	24	True	AATAAA	-24	NA	201982954	202006147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201983114_201988903_201989045_201996146_201996410_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_176.known	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	850	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_11100_13600
transcript_1760.known	chr1	+	1096	6	FSM	ENSG00000157870.17	ENST00000537325.6	1096	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	167.408960333669	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGATGGGCCAGCCT	-12	True	NA	NA	False	NA	NA	NA	2586795	2589947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588956_2589041_2589409
transcript_176010.nnic	chr8	-	2144	10	NNC	ENSG00000171045.16	novel	1905	14	NA	NA	-55	248	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	14.8473716342134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTAGCCTATGGTT	215	False	NA	NA	False	TTTAAA	-31	NA	142402943	142299867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_142300645_142314383_142314441_142315002_142315093_142318543_142318635_142330900_142330971_142331753_142331832_142343965_142344473_142345742_142345893_142354636_142354764_142402746
transcript_176012.nic	chr8	-	2110	10	ISM	ENSG00000171045.16	ENST00000524325.6	1905	14	-84	87788	-84	248	5prime_fragment	FALSE	canonical	3	21	junction_9	12.7085078919402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTAGCCTATGGTT	NA	False	NA	NA	False	TTTAAA	-31	NA	142403266	142299867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_142300645_142314383_142314441_142315002_142315093_142318543_142318635_142330900_142330971_142331753_142331832_142343965_142344473_142345742_142345893_142354636_142354764_142403103
transcript_176030.known	chr8	-	2110	11	FSM	ENSG00000171045.16	ENST00000519651.5	2110	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	18.2164760587771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTGGTACTGTATGG	-10	True	NA	9	True	TATAAA	-37	NA	142403168	142270474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142271692_142274780_142274864_142284412_142284486_142300485_142300648_142314383_142314441_142315002_142315090_142318543_142318635_142330900_142330971_142331753_142331832_142354636_142354764_142403103
transcript_176037.known	chr8	-	2950	3	FSM	ENSG00000198576.4	ENST00000356613.4	2950	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTTCATGTTGTTT	-3	True	NA	-10	True	AATAAA	-14	NA	142614479	142611048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142611858_142612107_142612253_142612483
transcript_176038.known	chr8	-	407	2	FSM	ENSG00000198576.4	ENST00000581404.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGCCAAATGAGCTCCT	1774	False	NA	NA	False	NA	NA	NA	142612702	142612064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142612253_142612483
transcript_176039.known	chr8	-	2823	4	FSM	ENSG00000234616.9	ENST00000615982.4	2823	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.89897948556636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGCCTCAGGTGTTA	-1	True	NA	NA	False	AATAAA	-18	NA	142669970	142657462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142658081_142658821_142658945_142664477_142666521_142669931
transcript_176041.known	chr8	-	2687	3	FSM	ENSG00000234616.9	ENST00000571961.7	2687	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAAAGCCTTCAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	142669994	142658363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142658945_142664477_142666521_142669931
transcript_176043.known	chr8	-	9097	2	FSM	ENSG00000234616.9	ENST00000612905.2	9097	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCAGGTGTTACTT	2	True	NA	NA	False	AATAAA	-21	NA	142669967	142657459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142666521_142669931
transcript_176048.known	chr8	+	2239	2	FSM	ENSG00000130193.8	ENST00000336138.4	2239	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGGGAGGGCCTTG	12	True	NA	22	True	ATTAAA	-16	NA	142727222	142736927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_142727860_142735325
transcript_176049.nnic	chr8	+	2197	2	NNC	ENSG00000130193.8	novel	2239	2	NA	NA	-117	0	intron_retention	FALSE	canonical	3	11	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGGGAGGGCCTTG	NA	False	NA	22	True	ATTAAA	-16	NA	142727105	142736927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_142727701_142735325
transcript_176050.known	chr8	-	592	3	FSM	ENSG00000197353.4	ENST00000359228.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	11	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTCCTGTGTGTCTGT	-11	True	NA	61	True	NA	NA	NA	142752532	142750149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142750483_142751050_142751171_142752393
transcript_176053.known	chr8	-	639	4	FSM	ENSG00000180155.20	ENST00000613110.4	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.86744175568088	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGTACGACCTCTG	9210	False	NA	NA	False	NA	NA	NA	142777328	142775265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142775364_142775592_142775695_142775905_142776122_142777105
transcript_176054.known	chr8	-	4537	4	FSM	ENSG00000180155.20	ENST00000621401.4	4537	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.8977121983832	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTTCTCTCCAGCCCCA	25	True	NA	-13	True	AATAAA	-20	NA	142777810	142771196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142775364_142775592_142775695_142775905_142776122_142777758
transcript_176092.known	chr8	+	740	5	FSM	ENSG00000160932.11	ENST00000521003.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1835.62964333767	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGGTCAGGCCCACCC	12	True	NA	NA	False	NA	NA	NA	143018528	143021902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020261_143020378_143020882_143020992_143021313_143021434_143021565
transcript_176094.known	chr8	+	635	5	FSM	ENSG00000160932.11	ENST00000519611.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1640.87819474817	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCCGATCCCCCAGC	27	False	NA	NA	False	NA	NA	NA	143018543	143021800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021548
transcript_176096.known	chr8	+	868	5	FSM	ENSG00000160932.11	ENST00000522024.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1783.92110251547	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCTTGGTCCCAGGTC	40	False	NA	NA	False	NA	NA	NA	143018556	143021892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143018832_143019120_143020887_143020992_143021313_143021434_143021565
transcript_176101.known	chr8	+	971	4	FSM	ENSG00000160932.11	ENST00000519546.5	971	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	1582.55686223978	4908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCACTTCAAGGGCAG	35	False	NA	NA	False	NA	NA	NA	143018551	143022255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021548
transcript_176103.known	chr8	+	427	4	FSM	ENSG00000160932.11	ENST00000523847.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1600.09090019564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTTGCGCTTCCATCT	36	False	NA	9	True	NA	NA	NA	143018552	143023832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143023668
transcript_176104.known	chr8	+	1079	4	FSM	ENSG00000160932.11	ENST00000521182.5	1079	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	1480.84998114821	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	29	False	NA	14	True	AATAAA	-16	NA	143018545	143022409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020882_143020992_143021348_143021434_143021565
transcript_176106.known	chr8	+	857	4	FSM	ENSG00000160932.11	ENST00000522971.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1744.05013944235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGGGGAGGGAGGT	25	False	NA	NA	False	NA	NA	NA	143018541	143022182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020916_143020992_143021313_143021434_143021565
transcript_176109.known	chr8	+	490	3	FSM	ENSG00000160932.11	ENST00000520531.5	490	3	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_1	1321	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGGCTTCCATGGGC	11	True	NA	NA	False	NA	NA	NA	143018527	143021640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020887_143020992_143021313
transcript_176112.known	chr8	-	995	2	FSM	ENSG00000247317.4	ENST00000517833.2	1036	2	41	0	7	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAGGTGAAATAAAT	31	True	NA	NA	False	NA	NA	NA	143018390	142981737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142982502_143018159
transcript_17612.known	chr1	+	2044	9	FSM	ENSG00000163435.16	ENST00000367283.7	2044	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	35.2683905927106	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAGCTACCTGTGTAC	2	True	NA	14	True	AATAAA	-27	NA	202010586	202016009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202010821_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_176133.known	chr8	+	1554	6	FSM	ENSG00000177335.12	ENST00000517653.5	1554	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.2567051239665	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTCATGGGAAGCCTT	0	True	NA	NA	False	NA	NA	NA	143039208	143053938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143039570_143043177_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_176136.known	chr8	-	942	4	FSM	ENSG00000176956.13	ENST00000342752.9	942	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGGGTCTGAGCCTGGG	-32	True	NA	NA	False	AATAAA	-19	NA	143160321	143157915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143158486_143158802_143158923_143159581_143159710_143160197
transcript_176142.known	chr8	+	1082	4	FSM	ENSG00000250571.7	ENST00000521682.5	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	19.9387952383176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCCCATCCACTGGGT	-25	True	NA	NA	False	NA	NA	NA	143267436	143275751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143267485_143269359_143269521_143274703_143274803_143274977
transcript_176143.known	chr8	+	1335	4	FSM	ENSG00000250571.7	ENST00000340042.2	1335	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	14.3836326735943	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	-17	True	NA	20	True	AATAAA	-20	NA	143267444	143276931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143267485_143269359_143269521_143274703_143274803_143275896
transcript_176145.nnic	chr8	+	1918	4	NNC	ENSG00000250571.7	novel	1335	4	NA	NA	31	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	24.7116706571342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	14	True	NA	20	True	AATAAA	-20	NA	143267475	143276931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_143268099_143269359_143269521_143274703_143274803_143275896
transcript_176146.known	chr8	+	4786	3	FSM	ENSG00000181638.20	ENST00000330701.7	4786	3	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTCTTCATTGAGCTC	-8	True	NA	17	True	AGTAAA	-19	NA	143246938	143262705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143247143_143249689_143251341_143259774
transcript_176148.nic	chr8	+	2550	3	NIC	ENSG00000181638.20	novel	3284	3	NA	NA	0	-2851	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCGCACATTCCTCAGTT	-16	True	NA	NA	False	NA	NA	NA	143246930	143259854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143247750_143249689_143251341_143259774
transcript_176149.nic	chr8	+	5401	3	NIC	ENSG00000181638.20	novel	4786	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTCTTCATTGAGCTC	-16	True	NA	17	True	AGTAAA	-19	NA	143246930	143262705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143247750_143249689_143251341_143259774
transcript_176151.nic	chr8	+	2448	3	ISM	ENSG00000250571.7	ENST00000340042.2	1335	4	-20	1	-8	-1	intron_retention	FALSE	canonical	3	33	junction_1	17.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGAGCCGGCACCTGCC	NA	False	NA	19	True	AATAAA	-19	NA	143267424	143276930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_143267485_143269359_143269521_143274703
transcript_176152.known	chr8	+	435	3	FSM	ENSG00000250571.7	ENST00000522479.1	435	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGAGCCGGCAGGGCAGC	NA	False	NA	NA	False	NA	NA	NA	143267433	143276181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143267485_143274703_143274803_143275896
transcript_176157.known	chr8	+	426	2	FSM	ENSG00000181638.20	ENST00000517702.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCGTGGGAAGCAAGCCA	2194	False	NA	NA	False	NA	NA	NA	143249140	143249756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143249500_143249689
transcript_176158.known	chr8	+	2333	1	FSM	ENSG00000250571.7	ENST00000523812.1	2333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	58	False	NA	20	True	AATAAA	-20	NA	143274598	143276931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143274600_143276900
transcript_176159.known	chr8	+	1297	3	FSM	ENSG00000250571.7	ENST00000523522.5	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	1896	False	NA	20	True	AATAAA	-20	NA	143269357	143276931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143269521_143274703_143274803_143275896
transcript_176160.known	chr8	-	660	3	FSM	ENSG00000253716.7	ENST00000517411.3	684	3	21	3	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-7	True	NA	-6	True	AATAAA	-20	NA	143281670	143280160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143280516_143280881_143280998_143281481
transcript_176161.known	chr8	-	379	2	FSM	ENSG00000253716.7	ENST00000518073.2	1048	2	2	667	1	0	multi-exon	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-27	True	NA	-14	True	ATTAAA	-16	NA	143281690	143280827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143280998_143281481
transcript_176162.known	chr8	+	605	4	FSM	ENSG00000185730.8	ENST00000520333.1	605	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	37.3838943337309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCTGCCGCAGAGGCAG	8	True	NA	NA	False	NA	NA	NA	143291421	143295812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143291768_143292971_143293066_143295378_143295471_143295739
transcript_176168.known	chr8	+	4658	3	FSM	ENSG00000185730.8	ENST00000330143.8	4658	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAATCAGAAAC	3	True	NA	NA	False	NA	NA	NA	143291416	143299952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143291768_143292971_143293066_143295739
transcript_176172.known	chr8	+	545	3	FSM	ENSG00000185730.8	ENST00000518432.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	34	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAACGCAGGCCCCGGCGC	3	True	NA	NA	False	NA	NA	NA	143291416	143295996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143291611_143292971_143293066_143295739
transcript_176179.nic	chr8	-	2036	15	NIC	ENSG00000184428.13	novel	1982	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	101.899535357736	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAGTGCTTGTACA	-22	True	NA	-27	True	AATAAA	-2	NA	143334891	143309355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143332486_143332602_143334739
transcript_176180.known	chr8	-	1982	15	FSM	ENSG00000184428.13	ENST00000523676.5	1982	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	103.936622172223	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATTTTGTACAATAAA	600	False	NA	25	True	ATTAAA	-9	NA	143334795	143309376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334107_143334286_143334739
transcript_176182.known	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_9	23.4008041130234	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-11	True	NA	5	True	AATAAA	-34	NA	143334880	143309323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
transcript_176187.known	chr8	-	1918	1	FSM	ENSG00000254389.3	ENST00000518049.1	1918	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGATGGAGTCTTG	78	False	NA	-7	True	NA	NA	NA	143368548	143366630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143366600_143368500
transcript_176192.known	chr8	+	3695	15	FSM	ENSG00000158106.14	ENST00000289013.11	3695	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	27.1850236381005	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTAGGCACTAACTGGG	-1	True	NA	16	True	AATAAA	-17	NA	143368875	143384221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380061_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_176193.nic	chr8	+	2322	15	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-72	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_10	26.0066710437055	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	7811	False	NA	-7	True	NA	NA	NA	143368803	143382779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380064_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_176222.nic	chr8	+	2635	14	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-33	0	intron_retention	FALSE	canonical	3	28	junction_9	26.8771036055757	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	-7	True	NA	-7	True	NA	NA	NA	143368842	143382779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380061_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_176251.nic	chr8	+	3071	13	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-56	0	intron_retention	FALSE	canonical	3	29	junction_8	24.8003136180887	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	-4	True	NA	-7	True	NA	NA	NA	143368819	143382779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380061_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_176253.nic	chr8	+	3076	13	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-64	0	intron_retention	FALSE	canonical	3	42	junction_8	23.0004528940917	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	7819	False	NA	-7	True	NA	NA	NA	143368811	143382779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_176287.nic	chr8	+	3407	12	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-72	0	intron_retention	FALSE	canonical	3	29	junction_7	24.3938076412779	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	7811	False	NA	-7	True	NA	NA	NA	143368803	143382779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379986_143380061_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_176289.nic	chr8	+	3387	12	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-55	0	intron_retention	FALSE	canonical	3	42	junction_7	22.251752647101	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	-3	True	NA	-7	True	NA	NA	NA	143368820	143382779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_176305.nic	chr8	+	3462	11	NIC	ENSG00000158106.14	novel	3656	14	NA	NA	-51	0	intron_retention	FALSE	canonical	3	52	junction_5	19.9799899899875	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	1	True	NA	-7	True	NA	NA	NA	143368824	143382779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_17635.known	chr1	-	5296	2	FSM	ENSG00000234678.2	ENST00000419190.2	5296	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTATTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202010463	201995695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202000328_202009799
transcript_176353.known	chr8	-	2669	1	FSM	ENSG00000182759.4	ENST00000333480.3	2669	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCGCAGCCTGGCTGGT	-2	True	NA	-35	True	AATAAA	-16	NA	143430732	143428063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143428100_143430700
transcript_176365.known	chr8	-	3270	12	FSM	ENSG00000014164.7	ENST00000262577.6	3270	12	0	0	0	0	multi-exon	TRUE	canonical	3	249	junction_10	27.9970482505532	1586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCTTGTCCTGACT	3	True	NA	-5	True	AATAAA	-15	NA	143541447	143437658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143438088_143440040_143440364_143440935_143441121_143465716_143465849_143468208_143468279_143468381_143468541_143468616_143468660_143475397_143475586_143507745_143507900_143536256_143536454_143538002_143539321_143541375
transcript_176367.known	chr8	+	2496	14	FSM	ENSG00000104518.11	ENST00000526406.5	2496	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.1803472093883	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	NA	False	NA	13	True	AATAAA	-19	NA	143553206	143563062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143553761_143555058_143555197_143555933_143556031_143558361_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_17637.known	chr1	+	3104	9	FSM	ENSG00000163435.16	ENST00000367284.10	3104	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	17.1021745693347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTTGTGTGTGGATT	2	True	NA	NA	False	GATAAA	-19	NA	202010586	202017183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202010707_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_176377.known	chr8	+	1723	11	FSM	ENSG00000104518.11	ENST00000262580.9	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	27.7937043231017	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	-17	True	NA	13	True	AATAAA	-19	NA	143558345	143563062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_176378.known	chr8	-	3265	14	FSM	ENSG00000204839.9	ENST00000398882.8	3265	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.81374479356491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTGGGCATCTGTTTTGA	-8	True	NA	-8	True	AATAAA	-17	NA	143572772	143566191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143567466_143567610_143567677_143567785_143567889_143568141_143568262_143568551_143568720_143569440_143569615_143569696_143569841_143569950_143570066_143570242_143570381_143570472_143570658_143570876_143570995_143571666_143571822_143572032_143572186_143572420
transcript_176381.known	chr8	-	1789	5	FSM	ENSG00000204839.9	ENST00000534459.5	1789	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.04633819296811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCACTTGCCCAGACTGG	23	True	NA	NA	False	NA	NA	NA	143568887	143566301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143567466_143567610_143567677_143567785_143567889_143568141_143568262_143568551
transcript_17639.known	chr1	-	1789	7	FSM	ENSG00000143862.8	ENST00000272217.7	1789	7	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	45.5228880161764	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-21	True	NA	-7	True	AATAAA	-20	NA	202144737	202133403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202134517_202135149_202135221_202135458_202135527_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_176396.known	chr8	-	1682	13	FSM	ENSG00000147813.16	ENST00000449291.7	1682	13	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_8	44.1981020205871	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCTGTGTTGTTTGT	3	True	NA	-4	True	GGGGCT	-38	NA	143578330	143574784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
transcript_17640.known	chr1	-	1727	6	FSM	ENSG00000143862.8	ENST00000614750.1	1727	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	213.766601694465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-27	True	NA	-7	True	AATAAA	-20	NA	202144743	202133403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202134517_202135149_202135221_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_176400.known	chr8	-	1654	13	FSM	ENSG00000147813.16	ENST00000426292.7	1654	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	111.370876903355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTCCTGTGTTGTTT	-10	True	NA	-6	True	GGGGCT	-36	NA	143578343	143574786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143574901_143574985_143575094_143575229_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
transcript_17641.known	chr1	+	6529	2	FSM	ENSG00000170075.10	ENST00000367282.6	6529	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCATGCTGAGTTCTCT	-8	True	NA	NA	False	AATAAA	-23	NA	202122916	202133592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202123594_202127740
transcript_176414.known	chr8	-	1774	12	FSM	ENSG00000147813.16	ENST00000340490.7	1774	12	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_7	43.9513254437732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTCCTGTGTTGTTT	-6	True	NA	-6	True	GGGGCT	-36	NA	143578339	143574786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
transcript_17642.nic	chr1	+	3362	18	NIC	ENSG00000133067.18	novel	2487	16	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.52187660120306	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACATGATGTCTTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	202214050	202319690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_202214238_202225422_202225495_202227935_202228008_202235921_202235994_202276305_202276522_202280780_202280853_202297507_202297577_202300848_202300921_202301163_202301236_202303278_202303348_202304558_202304631_202305683_202305750_202306867_202306940_202307329_202307402_202309050_202309177_202310196_202310358_202314801_202314883_202317951
transcript_176420.known	chr8	-	1877	11	FSM	ENSG00000147813.16	ENST00000435154.7	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_6	46.0656053905731	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCTGTGTTGTTTGT	-10	True	NA	-4	True	GGGGCT	-38	NA	143578343	143574784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
transcript_17644.known	chr1	-	824	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	518.119677294735	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	7330	False	NA	-11	True	AATATA	-14	NA	202341959	202331737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
transcript_176446.known	chr8	-	2207	10	FSM	ENSG00000104529.19	ENST00000442189.6	2207	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	1512.14403422654	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-1	True	NA	-34	True	ATTAAA	-14	NA	143597415	143579727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143590607_143590739_143597347
transcript_176448.known	chr8	-	2350	10	FSM	ENSG00000104529.19	ENST00000618139.4	2090	10	-260	0	4	0	multi-exon	FALSE	canonical	3	16	junction_9	1511.68026046401	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	0	True	NA	-34	True	ATTAAA	-14	NA	143597675	143579727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143592646_143592661_143597347
transcript_176466.known	chr8	-	1143	9	FSM	ENSG00000104529.19	ENST00000530191.6	1143	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	1406.57696198964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	273	False	NA	-42	True	ATTAAA	-6	NA	143597402	143579735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143593892_143594072_143597347
transcript_176479.known	chr8	-	861	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1112.17874059002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	288	False	NA	-35	True	ATTAAA	-13	NA	143597387	143579728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
transcript_176485.known	chr8	-	1458	8	FSM	ENSG00000104529.19	ENST00000317198.10	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	1129.84331584842	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGGCCTGTCTCCCTC	287	False	NA	-3	True	ATTAAA	-45	NA	143597388	143579696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143596878
transcript_176487.known	chr8	-	1311	8	FSM	ENSG00000104529.19	ENST00000529272.5	1311	8	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_7	983.603869161042	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597744	143579727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143597347
transcript_17649.known	chr1	-	1065	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_5	143.657091714959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	7309	False	NA	-2	True	AATAAA	-18	NA	202341980	202331656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
transcript_176493.known	chr8	-	899	8	FSM	ENSG00000104529.19	ENST00000529516.6	899	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1311.40899456287	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	278	False	NA	-42	True	ATTAAA	-6	NA	143597397	143579735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586850_143597347
transcript_176499.known	chr8	-	831	7	FSM	ENSG00000104529.19	ENST00000533833.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1431.08928986124	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	247	False	NA	-34	True	ATTAAA	-14	NA	143597428	143579727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586728_143586853_143597347
transcript_176504.known	chr8	-	886	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_6	1362.60799775855	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	276	False	NA	-42	True	ATTAAA	-6	NA	143597399	143579735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
transcript_176506.known	chr8	-	840	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1412.9110218112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	275	False	NA	-35	True	ATTAAA	-13	NA	143597400	143579728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
transcript_176519.known	chr8	-	1000	6	FSM	ENSG00000104524.14	ENST00000433751.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.3178799460556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGGTGGTGGCTCTG	-4	True	NA	NA	False	NA	NA	NA	143609569	143605485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143605883_143606061_143606155_143606466_143606620_143606952_143607133_143608061_143608127_143609457
transcript_176520.known	chr8	-	2678	6	FSM	ENSG00000104524.14	ENST00000220966.10	2678	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	12.6237870704476	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGTC	8434	False	NA	NA	False	NA	NA	NA	143609614	143603912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143605883_143606061_143606155_143606466_143606680_143606952_143607133_143608061_143608127_143609457
transcript_17654.known	chr1	+	15244	24	FSM	ENSG00000077157.22	ENST00000608999.6	15244	24	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_16	7.46864903021182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACAGTGTCCCCTTCTCA	-8	True	NA	NA	False	AATAAA	-20	NA	202348698	202592702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820_202438025_202440705_202440789_202442446_202442573_202448988_202449172_202488532_202488624_202493113_202493318_202495292_202495483_202495569_202495683_202496780_202496823_202558876_202558894_202562777_202562923_202564442_202564548_202567777_202567832_202569146_202569198_202580473
transcript_176540.known	chr8	-	343	3	FSM	ENSG00000104529.19	ENST00000524900.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCCCTGACGGCGGCA	3	True	NA	NA	False	NA	NA	NA	143597411	143589893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143590082_143590644_143590736_143597347
transcript_176542.known	chr8	+	5394	1	FSM	ENSG00000179886.6	ENST00000504548.4	5394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTTTTGAAGTCTTAT	-14	True	NA	NA	False	AATAAA	-27	NA	143597830	143603224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143597800_143603200
transcript_176543.known	chr8	-	1621	7	FSM	ENSG00000104529.19	ENST00000530445.6	1621	7	0	0	0	0	multi-exon	FALSE	canonical	3	2617	junction_5	377.620032425306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	9875	False	NA	-42	True	ATTAAA	-6	NA	143587564	143579735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728
transcript_176545.known	chr8	-	1324	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	218.131244896278	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-10	True	NA	-5	True	AATAAA	-17	NA	143617482	143612617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
transcript_176546.known	chr8	-	1345	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	80.4537755484477	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-17	True	NA	-5	True	AATAAA	-17	NA	143617549	143612617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_176551.nic	chr8	-	2153	10	NIC	ENSG00000104522.16	novel	1345	11	NA	NA	-139	0	intron_retention	FALSE	canonical	3	559	junction_9	84.7977987135672	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	NA	False	NA	-5	True	AATAAA	-17	NA	143618187	143612617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_17656.known	chr1	+	15431	25	FSM	ENSG00000077157.22	ENST00000391959.5	15431	25	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	7.53279865359187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCCCCTTCTCAATAT	-8	True	NA	NA	False	AATAAA	-24	NA	202348698	202592706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820_202438025_202440705_202440789_202442446_202442573_202445045_202445229_202448988_202449172_202488532_202488624_202493113_202493318_202495292_202495483_202495569_202495683_202496780_202496823_202558876_202558894_202562777_202562923_202564442_202564548_202567777_202567832_202569146_202569198_202580473
transcript_17658.known	chr1	+	1808	10	FSM	ENSG00000077157.22	ENST00000480184.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	3.05505046330389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCCTTTTGGTTTGTT	13	True	NA	NA	False	AATAAA	-16	NA	202348719	202438242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820
transcript_176587.known	chr8	-	951	7	FSM	ENSG00000104522.16	ENST00000532308.5	951	7	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_6	98.9299696193671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCATCATCCTCTCCGG	0	True	NA	NA	False	AATGAA	-4	NA	143617532	143613769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_17659.known	chr1	+	1687	9	FSM	ENSG00000077157.22	ENST00000356764.6	1687	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	6.9462219947249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCCTTTTGGTTTGTT	-4	True	NA	NA	False	AATAAA	-16	NA	202348727	202438242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202437820
transcript_176604.known	chr8	-	2220	9	FSM	ENSG00000104522.16	ENST00000531473.5	2220	9	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	34.6482322781408	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	28	True	NA	-5	True	AATAAA	-17	NA	143617504	143612617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566
transcript_176605.known	chr8	+	3960	2	FSM	ENSG00000183309.12	ENST00000526926.6	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTCAGTAGTTC	-19	True	NA	NA	False	NA	NA	NA	143636018	143653730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143636146_143649897
transcript_176606.known	chr8	+	2733	2	FSM	ENSG00000183309.12	ENST00000458270.2	2733	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGTAATTGGCATCT	124	False	NA	6	True	AATAAA	-16	NA	143636161	143652376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143636416_143649897
transcript_17661.known	chr1	-	7635	9	FSM	ENSG00000143858.12	ENST00000367268.5	7635	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	8.03118920210451	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGGTGGGGGGTGTCT	5	True	NA	NA	False	ATTAAA	-19	NA	202710454	202590595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603119_202604454_202604622_202605594_202605790_202710257
transcript_176612.known	chr8	+	577	6	FSM	ENSG00000181135.16	ENST00000528456.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.13687742827162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGAAGGGCTTCAGGCTG	-9	True	NA	NA	False	AAGAAA	-41	NA	143684461	143693772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143692244_143692331_143693670
transcript_176613.known	chr8	+	2185	6	FSM	ENSG00000181135.16	ENST00000358656.9	2185	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.68781778291716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGCTTTTGCCTGTTTT	8	True	NA	10	True	NA	NA	NA	143684478	143695385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143689203_143689302_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_176615.known	chr8	+	567	5	FSM	ENSG00000181135.16	ENST00000534303.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.73205080756888	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGCCCACGGCTTTCC	-18	True	NA	NA	False	NA	NA	NA	143684452	143693839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_176616.known	chr8	+	2114	5	FSM	ENSG00000181135.16	ENST00000533031.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.9474565306379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCGTGTTTCAGGTT	-15	True	NA	-19	True	NA	NA	NA	143684455	143695356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691233_143691599_143691714_143693670
transcript_17662.known	chr1	-	6520	28	FSM	ENSG00000117139.18	ENST00000367264.7	6520	28	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_22	269.403522411117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAAATAATTAAATCTC	-5	True	NA	8	True	TTTAAA	-21	NA	202808481	202727434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766396_202766505_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_176620.known	chr8	+	444	2	FSM	ENSG00000181135.16	ENST00000525619.5	444	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCTGGGCACGCACCT	-9	True	NA	NA	False	AATACA	-4	NA	143684461	143690419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143690056
transcript_176624.known	chr8	+	1871	14	FSM	ENSG00000181085.15	ENST00000338033.9	1871	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	7.72607971045521	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	-6	True	NA	13	True	AATAAA	-18	NA	143716348	143722458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720288_143720702_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_176640.nic	chr8	+	3236	11	NIC	ENSG00000181085.15	novel	1871	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	16	junction_1	3.73630833845388	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	-23	True	NA	13	True	AATAAA	-18	NA	143716331	143722458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_176647.known	chr8	-	5632	5	FSM	ENSG00000180921.7	ENST00000388913.4	5632	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.27760839478607	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGCATGTTCCCCAGTG	-12	True	NA	-12	True	AATAAA	-18	NA	143733779	143723932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143728724_143728966_143729092_143729158_143729324_143730135_143730598_143733690
transcript_176648.known	chr8	-	5143	36	FSM	ENSG00000180900.20	ENST00000320476.7	5143	36	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_25	65.2300544227889	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCCTGTCCATCCCCC	7987	False	NA	-1	True	AATAAA	-21	NA	143815379	143790919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
transcript_17667.known	chr1	-	5362	27	FSM	ENSG00000117139.18	ENST00000650417.1	5362	27	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_24	221.168909186017	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTTCTATGTTGGTTTC	-5	True	NA	62	True	NA	NA	NA	202808481	202728480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773285_202774612_202774736_202777016_202777095_202808101
transcript_176672.known	chr8	-	1842	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_11	597.939492226125	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	3	True	NA	-31	True	GATAAA	-25	NA	143829026	143816376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_176674.known	chr8	-	1868	12	FSM	ENSG00000179950.14	ENST00000526683.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_7	445.979060398635	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCGTGTGTCCTTAG	11	True	NA	2	True	NA	NA	NA	143829315	143816343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_176694.known	chr8	-	1736	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_10	599.854282305295	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	7074	False	NA	-31	True	GATAAA	-25	NA	143829303	143816376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
transcript_176698.known	chr8	-	1804	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	566.651074295285	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-10	True	NA	-31	True	GATAAA	-25	NA	143829039	143816376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_176700.known	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_7	360.966258810986	3054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	7025	False	NA	-31	True	GATAAA	-25	NA	143829352	143816376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_176715.known	chr8	-	1559	10	FSM	ENSG00000179950.14	ENST00000527197.5	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_9	565.690138974804	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCCCTCTCCCCGGA	6	True	NA	-40	True	NA	NA	NA	143829320	143816519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143829279
transcript_176742.known	chr8	-	604	5	FSM	ENSG00000179950.14	ENST00000532127.5	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	432.043617589706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGAGGGCAGCCGGCCAG	7	True	NA	NA	False	NA	NA	NA	143829319	143820425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_176745.known	chr8	-	3724	18	FSM	ENSG00000185189.18	ENST00000442628.7	3724	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_14	14.0522997415968	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACTCTCTTAACTGTTT	-5	True	NA	NA	False	AATAAA	-37	NA	143840973	143833582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839550_143839735_143839826_143839928_143840031_143840106_143840230_143840705
transcript_176747.known	chr8	-	3877	17	FSM	ENSG00000185189.18	ENST00000533093.5	3877	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	8.99457301654726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTCCAAATTCAACTCT	17	True	NA	NA	False	AATAAA	-26	NA	143840951	143833593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839826_143839928_143840031_143840106_143840230_143840705
transcript_176755.nic	chr8	-	3620	16	NIC	ENSG00000185189.18	novel	3877	17	NA	NA	6	-209	intron_retention	FALSE	canonical	3	51	junction_1	5.59364719024081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGAATCTCAGTTATCTT	1	True	NA	-20	True	AATAAA	-15	NA	143840967	143833955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839826_143839928_143840031_143840106_143840230_143840705
transcript_176765.known	chr8	-	16005	2	FSM	ENSG00000261150.3	ENST00000615648.2	16005	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTTTTGATTTCAGG	-2	True	NA	-17	True	AGTAAA	-13	NA	143878467	143857323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143873299_143878437
transcript_17677.known	chr1	-	5422	26	FSM	ENSG00000117139.18	ENST00000648469.1	5422	26	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_24	222.5343119611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCCCTTCCTTTCT	6	True	NA	NA	False	NA	NA	NA	202808470	202728290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202777016_202777095_202808101
transcript_176779.known	chr8	+	1858	7	FSM	ENSG00000178719.17	ENST00000395068.9	1858	7	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_2	46.1642598650611	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	0	True	NA	23	True	AATAAA	-18	NA	143990055	143993415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143990200_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_17678.known	chr1	-	6202	26	FSM	ENSG00000117139.18	ENST00000650569.1	6202	26	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_22	215.795087988582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTATGCACTTCAAATA	1	True	NA	-2	True	TTTAAA	-11	NA	202808416	202727444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_176783.known	chr8	+	1968	7	FSM	ENSG00000178719.17	ENST00000313269.5	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	160.402358669275	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	2	True	NA	23	True	AATAAA	-18	NA	143990057	143993415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143990312_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_176799.known	chr8	-	3505	11	FSM	ENSG00000178685.14	ENST00000313028.12	3505	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTGCGACCTCTGTT	-15	True	NA	-7	True	AATAAA	-36	NA	143986460	143977157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143977831_143977906_143978082_143982931_143983066_143983166_143983812_143984007_143984105_143984209_143984432_143984543_143985329_143985411_143985649_143985720_143985976_143986054_143986234_143986357
transcript_176801.known	chr8	-	4020	27	FSM	ENSG00000178814.17	ENST00000618853.5	4020	27	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_17	15.4370740244993	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGCTCCGAGTCGTGT	0	True	NA	-7	True	NA	NA	NA	144060692	144051265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144051473_144051728_144051827_144051915_144052077_144052168_144052327_144052448_144052599_144052765_144052901_144052982_144053130_144053208_144053394_144054560_144054736_144054811_144054914_144055028_144055190_144055787_144055940_144056146_144056260_144056384_144056524_144056617_144056756_144056947_144057119_144057207_144057321_144057447_144057714_144057855_144057924_144058009_144058149_144058238_144058405_144058495_144058692_144058772_144058897_144058979_144059080_144059598_144059791_144059861_144060086_144060652
transcript_176809.nic	chr8	-	4197	26	NIC	ENSG00000178814.17	novel	4020	27	NA	NA	-55	0	intron_retention	FALSE	canonical	3	84	junction_16	15.6894869259641	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGCTCCGAGTCGTGT	-5	True	NA	-7	True	NA	NA	NA	144060747	144051265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144051473_144051728_144051827_144051915_144052077_144052168_144052599_144052765_144052901_144052982_144053130_144053208_144053394_144054560_144054736_144054811_144054914_144055028_144055190_144055787_144055940_144056146_144056260_144056384_144056524_144056617_144056756_144056947_144057119_144057207_144057321_144057447_144057714_144057855_144057924_144058009_144058149_144058238_144058405_144058495_144058692_144058772_144058897_144058979_144059080_144059598_144059791_144059861_144060086_144060652
transcript_176810.nic	chr8	-	4164	26	NIC	ENSG00000178814.17	novel	4020	27	NA	NA	-55	0	intron_retention	FALSE	canonical	3	84	junction_16	15.540090089829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGCTCCGAGTCGTGT	-5	True	NA	-7	True	NA	NA	NA	144060747	144051265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144051473_144051728_144052077_144052168_144052327_144052448_144052599_144052765_144052901_144052982_144053130_144053208_144053394_144054560_144054736_144054811_144054914_144055028_144055190_144055787_144055940_144056146_144056260_144056384_144056524_144056617_144056756_144056947_144057119_144057207_144057321_144057447_144057714_144057855_144057924_144058009_144058149_144058238_144058405_144058495_144058692_144058772_144058897_144058979_144059080_144059598_144059791_144059861_144060086_144060652
transcript_17684.known	chr1	-	9485	26	FSM	ENSG00000117139.18	ENST00000648338.1	9485	26	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_20	104.076310464966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAAAACTTTTAGCTCC	3	True	NA	NA	False	AATAAA	-22	NA	202808473	202724886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_176853.known	chr8	+	842	3	FSM	ENSG00000178896.9	ENST00000316052.6	842	3	0	0	0	0	multi-exon	FALSE	canonical	1	159	junction_1	148.5	956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCACTGTACGTTATCA	-14	True	NA	13	True	AATAAA	-20	NA	144078671	144080648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144078900_144079942_144080150_144080241
transcript_176855.known	chr8	-	1264	1	FSM	ENSG00000255224.1	ENST00000524499.1	1264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGCAATCTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	144079265	144078001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144078000_144079300
transcript_176868.known	chr8	+	2054	12	FSM	ENSG00000197858.11	ENST00000355091.9	2054	12	0	0	0	0	multi-exon	FALSE	canonical	2	380	junction_8	87.8494203803134	5948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	-5	True	NA	27	True	AATAAA	-23	NA	144082633	144086216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144082805_144083123_144083304_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_17688.nic	chr1	-	3556	22	ISM	ENSG00000117139.18	ENST00000648473.1	6703	27	-33	8060	-27	0	5prime_fragment	FALSE	canonical	3	838	junction_16	98.9394326740783	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGCACCAAATTAG	NA	False	NA	8	True	NA	NA	NA	202808514	202735504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_176914.known	chr8	+	1840	11	FSM	ENSG00000197858.11	ENST00000361036.10	1840	11	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	202.956744159932	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	29	True	NA	27	True	AATAAA	-23	NA	144082667	144086216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144082805_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_17695.nic	chr1	-	1115	7	ISM	ENSG00000117139.18	ENST00000367264.7	6520	28	-33	36624	-27	15	5prime_fragment	FALSE	canonical	3	74	junction_1	474.014767702442	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAAAATGGTAAGAAAAT	NA	False	NA	-4	True	NA	NA	NA	202808514	202764058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_202764146_202766396_202766505_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_17697.nic	chr1	-	1007	6	ISM	ENSG00000117139.18	ENST00000648473.1	6703	27	-33	36614	-27	15	5prime_fragment	FALSE	canonical	3	921	junction_1	81.5916662411058	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAAAATGGTAAGAAAAT	NA	False	NA	-4	True	NA	NA	NA	202808514	202764058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_177.known	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_-_2200_2400
transcript_17701.known	chr1	-	3779	4	FSM	ENSG00000117139.18	ENST00000650368.1	3779	4	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_2	26.0298973404728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGGGCATGATTTTCTT	-11	True	NA	NA	False	AATAAA	-25	NA	202808487	202770096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202773289_202774612_202774736_202777016_202777095_202808101
transcript_177012.known	chr8	+	1191	7	FSM	ENSG00000179091.5	ENST00000318911.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	3227	junction_3	158.629197256439	5493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	-3	True	NA	18	True	AATAAA	-18	NA	144095075	144097525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144095229_144095832_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_177035.known	chr8	+	1832	6	FSM	ENSG00000179091.5	ENST00000533444.1	1832	6	0	0	0	0	multi-exon	FALSE	canonical	3	3227	junction_2	153.909843739769	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	-4	True	NA	18	True	AATAAA	-18	NA	144095038	144097525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_177039.known	chr8	-	1348	9	FSM	ENSG00000179526.17	ENST00000398712.7	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	72.0120432636097	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-39	True	NA	-6	True	ATTAAA	-16	NA	144103773	144098636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_17704.known	chr1	+	634	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	69	2	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	25	True	NA	23	True	NA	NA	NA	202810961	202811913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202811371_202811688
transcript_177044.known	chr8	+	1715	8	FSM	ENSG00000179632.10	ENST00000322428.10	1715	8	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_6	46.0789030481678	3179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACCTGATGCGGTGT	-2	True	NA	25	True	AATAAA	-16	NA	144104460	144107611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834_144106964_144107087
transcript_177048.known	chr8	+	1098	8	FSM	ENSG00000179632.10	ENST00000532522.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	313.505850611032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCCTGGCACTGCCC	10	True	NA	NA	False	NA	NA	NA	144104974	144107217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144105150_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834_144106964_144107087
transcript_177058.known	chr8	-	1687	8	FSM	ENSG00000179526.17	ENST00000359551.6	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	169.456032464989	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-9	True	NA	-6	True	ATTAAA	-16	NA	144104237	144098636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_17706.nnic	chr1	-	1936	4	NNC	ENSG00000214796.9	novel	1982	3	NA	NA	-18	1740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.9843289100801	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGGATCTGGATCTGTT	113	False	NA	-7	True	AATAAA	-37	NA	202861639	202850087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_202850193_202851862_202853281_202858881_202859103_202861447
transcript_177061.nic	chr8	+	1846	7	ISM	ENSG00000179632.10	ENST00000322428.10	1715	8	-10	3	-10	-3	intron_retention	FALSE	canonical	3	799	junction_6	48.2312139594267	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTGGACCTGATGCGG	25	False	NA	22	True	AATAAA	-13	NA	144104450	144107608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834
transcript_177063.known	chr8	+	1754	7	FSM	ENSG00000179632.10	ENST00000534585.5	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_5	49.4955104585815	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACCTGATGCGGTGT	23	False	NA	25	True	AATAAA	-16	NA	144104511	144107611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106675_144106834_144106964_144107087
transcript_17707.known	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	93	junction_1	49	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	9	True	NA	NA	False	NA	NA	NA	202861608	202851827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202853281_202858881_202859103_202861447
transcript_17709.known	chr1	-	631	3	FSM	ENSG00000214796.9	ENST00000430114.2	1112	3	0	481	0	-481	multi-exon	FALSE	canonical	3	97	junction_1	47	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGCCGTGCATCATC	-3	True	NA	NA	False	AAAAAG	-14	NA	202861620	202857927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202858165_202858881_202859103_202861447
transcript_177097.known	chr8	-	613	2	FSM	ENSG00000179526.17	ENST00000531375.1	613	2	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGCCTGCACTTCCTT	-22	True	NA	NA	False	NA	NA	NA	144103756	144102816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144103226_144103552
transcript_177099.nnic	chr8	+	2367	7	NNC	ENSG00000235173.7	novel	2106	7	NA	NA	-49	0	intron_retention	TRUE	non_canonical	0	0	junction_1	111.461004640886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGGCATGTGTGGA	NA	False	NA	16	True	ATTAAA	-10	NA	144137724	144140713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144137923_144138000_144138429_144138506_144138608_144138714_144138814_144139008_144139101_144139188_144139312_144139387
transcript_177101.nnic	chr8	+	2213	7	NNC	ENSG00000235173.7	novel	2106	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.461004640886	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGGCATGTGTGGA	NA	False	NA	16	True	ATTAAA	-10	NA	144137750	144140713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144137845_144138050_144138429_144138506_144138608_144138714_144138814_144139008_144139101_144139188_144139312_144139387
transcript_177102.nnic	chr8	+	2239	7	NNC	ENSG00000235173.7	novel	2106	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.461004640886	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGGCATGTGTGGA	-27	True	NA	16	True	ATTAAA	-10	NA	144137768	144140713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144137923_144138084_144138429_144138506_144138608_144138714_144138814_144139008_144139101_144139188_144139312_144139387
transcript_177103.nnic	chr8	+	1973	7	NNC	ENSG00000235173.7	novel	2534	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.461004640886	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGGCATGTGTGGA	-22	True	NA	16	True	ATTAAA	-10	NA	144137773	144140713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144137923_144138345_144138429_144138506_144138608_144138714_144138814_144139008_144139101_144139188_144139312_144139387
transcript_177104.known	chr8	+	2534	6	FSM	ENSG00000235173.7	ENST00000347708.5	2534	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	20.5854317418897	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCTCAGTTTACTGGA	-22	True	NA	15	True	AATAAA	-27	NA	144137773	144140851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144138429_144138506_144138608_144138714_144138814_144139008_144139101_144139188_144139312_144139387
transcript_177120.known	chr8	+	5349	44	FSM	ENSG00000179832.18	ENST00000326134.10	5349	44	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	15.545915871071	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGACTGACAGGGTGC	5	True	NA	2	True	AATAAA	-15	NA	144148015	144261926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144148077_144160969_144161090_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144242601_144242629_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
transcript_177123.nic	chr8	+	5245	43	NIC	ENSG00000179832.18	novel	5349	44	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_23	14.7505332545138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGACTGACAGGGTGC	-11	True	NA	2	True	AATAAA	-15	NA	144147999	144261926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144242601_144242629_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
transcript_17713.known	chr1	-	3119	2	FSM	ENSG00000183155.5	ENST00000367262.4	3119	2	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAGTAGGGGATGGGG	2932	False	202889166	NA	False	NA	NA	NA	202889149	202878281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202881224_202888972
transcript_177132.nic	chr8	+	5218	42	NIC	ENSG00000179832.18	novel	5349	44	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	12.2442425373036	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGACTGACAGGGTGC	-11	True	NA	2	True	AATAAA	-15	NA	144147999	144261926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
transcript_177150.known	chr8	+	3905	31	FSM	ENSG00000179832.18	ENST00000532255.5	3905	31	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.7349475416622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATCCACTGCTGCCTGT	5	True	NA	NA	False	NA	NA	NA	144148015	144250753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211
transcript_177158.nic	chr8	+	1852	13	NIC	ENSG00000179832.18	novel	5349	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	26.0036055192352	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	5	True	NA	7	True	AATAAA	-17	NA	144148015	144213467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144148077_144160969_144161090_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_177160.known	chr8	+	1712	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	25.4353823970852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	-1	True	NA	7	True	AATAAA	-17	NA	144148035	144213467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_177193.known	chr8	-	2428	16	FSM	ENSG00000261236.8	ENST00000569669.6	2428	16	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_15	85.3298436786464	6113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCGAGCCTTCCCCTCAC	-17	True	NA	-6	True	NA	NA	NA	144291438	144262044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144262318_144262395_144262504_144262587_144262673_144262852_144263142_144263220_144263402_144263477_144263611_144263691_144263762_144263830_144263912_144263980_144264143_144264224_144264438_144264514_144264617_144264713_144264832_144264916_144265072_144276223_144276305_144289094_144289305_144291271
transcript_1772.known	chr1	+	2577	6	FSM	ENSG00000157870.17	ENST00000484099.5	2577	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	170.509119990691	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGCTTTCTTCTTTT	-5	True	NA	20	True	AATAAA	-20	NA	2587077	2591469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2587296_2587740_2587793_2588389_2588454_2588529_2588626_2588953_2589041_2589409
transcript_17721.known	chr1	-	3311	12	FSM	ENSG00000117153.16	ENST00000367261.8	3311	12	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	22.5480203818538	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAGAGTTTGTGGCTAA	-4	True	NA	-24	True	ATTAAA	-17	NA	202927234	202891119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_17722.nic	chr1	-	3156	11	NIC	ENSG00000117153.16	novel	3311	12	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	53.9925920844703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTTTGTGGCTAACCAA	-32	True	NA	-20	True	ATTAAA	-21	NA	202927262	202891115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_202892660_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_17733.known	chr1	-	2091	8	FSM	ENSG00000159346.13	ENST00000340990.10	2091	8	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_3	49.5864530545452	2132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-22	True	NA	-8	True	AATAAA	-31	NA	202958312	202940831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202958184
transcript_177335.known	chr8	-	3653	17	FSM	ENSG00000185000.12	ENST00000528718.6	3653	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	12.0208152801713	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGGTCAGTCCAGGT	-1	True	NA	-11	True	AATACA	-18	NA	144326852	144314583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144316710_144316852_144316916_144317021_144317110_144317186_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698_144318752_144318834_144318921_144319027_144319069_144321320_144321409_144326436
transcript_177353.nic	chr8	+	2308	14	NIC	ENSG00000185122.11	novel	2134	13	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_9	275.060402188448	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTATGGCCTCCATGTGT	NA	False	NA	16	True	TATAAA	-13	NA	144291509	144314716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144312627_144312712_144313510_144313617_144313845_144313912_144313984_144314055_144314124
transcript_177367.known	chr8	+	2105	13	FSM	ENSG00000185122.11	ENST00000400780.8	2105	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	384.545799901939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGATGGACGGACAAGACA	-9	True	NA	-32	True	NA	NA	NA	144291590	144314668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144312627_144312712_144313510_144313617_144313984_144314055_144314132
transcript_177369.known	chr8	+	2134	13	FSM	ENSG00000185122.11	ENST00000528838.6	2134	13	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_9	106.250065359457	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCATGTGTTTCC	4	True	NA	20	True	TATAAA	-17	NA	144291603	144314720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
transcript_177466.known	chr8	-	1727	9	FSM	ENSG00000182325.11	ENST00000455319.6	1727	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	92.9341164481591	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGTGTGGTCCTC	12	True	NA	-6	True	AATAAA	-13	NA	144358472	144355430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989_144357122_144357456_144357503_144357627_144357787_144358031
transcript_177477.known	chr8	+	1780	6	FSM	ENSG00000185803.12	ENST00000676358.1	1780	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	206.058826552031	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATTAATTCTTTGAGC	28	True	NA	32	True	AATAAA	-19	NA	144358627	144361276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144359066_144359183_144359424_144359622_144359748_144360114_144360494_144360589_144360714_144360802
transcript_177478.known	chr8	+	942	6	FSM	ENSG00000185803.12	ENST00000526779.3	942	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	207.248063923406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCGGCATTGCTGGCAG	21	False	NA	NA	False	NA	NA	NA	144359011	144360879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144359066_144359183_144359424_144359622_144359748_144360171_144360494_144360589_144360714_144360802
transcript_17748.known	chr1	-	1624	9	FSM	ENSG00000159348.13	ENST00000367249.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	9.48683298050514	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTGTCTGGGGTC	-11	True	NA	-4	True	AATAAA	-31	NA	202967257	202961872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527_202966601_202966748_202966899_202967190
transcript_177485.known	chr8	+	1757	5	FSM	ENSG00000185803.12	ENST00000530047.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	203.418749135865	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGCATTAATTCT	3907	False	NA	26	True	AATAAA	-13	NA	144358556	144361270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144358611_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_177487.known	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	30.8747469625259	2189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	13	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_17749.known	chr1	-	863	8	FSM	ENSG00000159348.13	ENST00000482572.5	863	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	29.0116092174797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCGATTCACCTACTGA	3	True	NA	NA	False	NA	NA	NA	202967243	202962546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966748_202966899_202967190
transcript_177490.known	chr8	+	1673	5	FSM	ENSG00000185803.12	ENST00000675597.1	1673	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	217.212453602458	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	6	True	NA	28	True	AATAAA	-15	NA	144358605	144361272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144359066_144359183_144359424_144360114_144360494_144360589_144360714_144360802
transcript_177492.known	chr8	+	1696	5	FSM	ENSG00000185803.12	ENST00000674870.1	1696	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.793929423734	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	6	False	NA	28	True	AATAAA	-15	NA	144358569	144361272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144358611_144359233_144359424_144359622_144360494_144360589_144360714_144360802
transcript_177493.known	chr8	+	1879	5	FSM	ENSG00000185803.12	ENST00000675280.1	1879	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	226.766813048118	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	88	False	NA	28	True	AATAAA	-15	NA	144358722	144361272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144358901_144359187_144359424_144359622_144360494_144360589_144360714_144360802
transcript_177494.known	chr8	+	1910	5	FSM	ENSG00000185803.12	ENST00000329994.7	1910	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.793929423734	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAGCACATCTCTCT	-7	True	NA	42	True	AATAAA	-29	NA	144358592	144361286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144358784_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_1775.nnic	chr1	+	2014	5	NNC	ENSG00000142611.17	novel	3737	13	NA	NA	-2737	-19492	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.11803398874989	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAATTAGCCAA	9087	False	NA	NA	False	NA	NA	NA	3393753	3406580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_3394223_3396490_3396594_3402790_3402999_3404738_3404887_3405494
transcript_177509.known	chr8	+	2104	6	FSM	ENSG00000185803.12	ENST00000532815.2	2104	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.856114032362	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	-6	True	NA	28	True	AATAAA	-15	NA	144354643	144361272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144354691_144357250_144357603_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_177521.known	chr8	-	4462	37	FSM	ENSG00000071894.17	ENST00000620219.4	4462	37	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_26	74.6379326325048	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGTGGATGCCGTCACCA	23	True	NA	-91	True	NA	NA	NA	144409288	144393317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014
transcript_177581.known	chr8	+	1960	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	13.9855975480317	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-9	True	NA	NA	False	NA	NA	NA	144374046	144393242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_177583.nnic	chr8	+	1972	15	NNC	ENSG00000173137.12	novel	1960	15	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_8	20.1059692628831	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	912	False	NA	NA	False	NA	NA	NA	144373998	144393242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391818_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_177597.known	chr8	+	2027	14	FSM	ENSG00000173137.12	ENST00000529654.5	2027	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	18.6068003093353	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-10	True	NA	NA	False	NA	NA	NA	144374045	144393242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390860_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_177621.nic	chr8	+	2153	13	NIC	ENSG00000173137.12	novel	1960	15	NA	NA	-43	0	intron_retention	FALSE	canonical	3	45	junction_1	11.5686357593855	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	912	False	NA	NA	False	NA	NA	NA	144373998	144393242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_17763.known	chr1	+	3031	8	FSM	ENSG00000163444.12	ENST00000367242.4	3031	8	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_3	156.580291719942	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCAGCTCTGAGTT	-10	True	NA	13	True	AATAAA	-19	NA	203007373	203024848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203007575_203007773_203007864_203008642_203008811_203014888_203015049_203015959_203016141_203018480_203018562_203020792_203020949_203022854
transcript_177653.known	chr8	-	4480	38	FSM	ENSG00000071894.17	ENST00000616140.2	4480	38	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_37	85.7316809021	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTGTGTGGTCATTAC	-24	True	NA	-4	True	AAAACA	-25	NA	144409335	144393230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014_144409173_144409288
transcript_177654.known	chr8	-	2123	12	FSM	ENSG00000147804.10	ENST00000301305.8	2123	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	7.45897872609673	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	0	True	NA	-1	True	AGTAAA	-19	NA	144416844	144412413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512_144413568_144413749_144413882_144413957_144414096_144414261_144414435_144414724_144414897_144414973_144415111_144415226_144415420_144415809_144416092_144416597
transcript_177662.known	chr8	-	650	10	FSM	ENSG00000160948.14	ENST00000533806.5	650	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	115.611524907156	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTCGACCTGGAG	-20	True	NA	NA	False	NA	NA	NA	144428548	144423863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_177666.known	chr8	-	948	10	FSM	ENSG00000160948.14	ENST00000292510.6	948	10	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_9	55.8518764122158	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-20	True	NA	-25	True	AATAAA	-18	NA	144428548	144423616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_177675.known	chr8	-	573	9	FSM	ENSG00000160948.14	ENST00000531032.5	573	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	58.6024743504914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGCACCGCATGAGC	-15	True	NA	NA	False	NA	NA	NA	144428543	144424104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_177680.nic	chr8	-	1718	8	NIC	ENSG00000160948.14	novel	948	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	203	junction_7	62.9100426751386	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	1949	False	NA	-25	True	AATAAA	-18	NA	144428561	144423616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_177709.known	chr8	-	570	5	FSM	ENSG00000160948.14	ENST00000526734.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_4	79.3268554778267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGGGGCTTTGTTCAA	-15	True	NA	NA	False	NA	NA	NA	144428543	144425395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_177720.known	chr8	-	564	2	FSM	ENSG00000160948.14	ENST00000524521.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCGGTCCCCCGGGGAG	-15	True	NA	NA	False	NA	NA	NA	144428543	144426470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144426980_144428488
transcript_177721.known	chr8	-	892	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	18.7078693335184	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-9	True	NA	-25	True	AATAAA	-18	NA	144426983	144423616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_177724.nnic	chr8	-	4493	27	NNC	ENSG00000160949.18	novel	4531	26	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.9824077414885	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCCTCCCCGTGGCTG	NA	False	NA	-8	True	AATAAA	-15	NA	144444507	144428774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436024_144436128_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144440871_144440965_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
transcript_177738.known	chr8	-	4531	26	FSM	ENSG00000160949.18	ENST00000409379.8	4531	26	0	0	0	0	multi-exon	FALSE	canonical	1	85	junction_10	61.7203499666034	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCCTCCCCGTGGCTG	-11	True	NA	-8	True	AATAAA	-15	NA	144444440	144428774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144440871_144440965_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
transcript_177797.known	chr8	-	1012	5	FSM	ENSG00000187954.13	ENST00000526887.5	1012	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	96.9677781533639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTCCTTCCTGCTGCTC	-5	True	NA	NA	False	NA	NA	NA	144465430	144450575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144450771_144452358_144452571_144453221_144453461_144464808_144465097_144465352
transcript_17780.nic	chr1	+	455	3	ISM	ENSG00000163444.12	ENST00000367242.4	3031	8	-11	16053	-11	-6777	5prime_fragment	FALSE	canonical	3	1475	junction_1	18	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAGACACAAAGGTATG	NA	False	NA	NA	False	AAAAAG	-5	NA	203007362	203008795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_203007575_203007773_203007864_203008642
transcript_177805.known	chr8	-	907	3	FSM	ENSG00000187954.13	ENST00000528558.1	907	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	38	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCTAACCAGAAAGTGGG	3269	False	NA	NA	False	GGGGCT	-21	NA	144462415	144452035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144452571_144453221_144453461_144462282
transcript_177806.nnic	chr8	-	1739	3	NNC	ENSG00000187954.13	novel	907	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	119.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	2802	False	NA	0	True	AATAAA	-24	NA	144462882	144451119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144452571_144453221_144453461_144462833
transcript_177807.known	chr8	-	853	3	FSM	ENSG00000187954.13	ENST00000533764.5	853	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	66	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGGGTGTGGCAGGCC	-9	True	NA	NA	False	NA	NA	NA	144465434	144464274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808_144465097_144465207
transcript_177808.known	chr8	-	1216	3	FSM	ENSG00000187954.13	ENST00000306145.10	1216	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	19	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAAACTGCCCATTTTT	-67	True	NA	-14	True	AATAAA	-21	NA	144465492	144463824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808_144465097_144465352
transcript_177809.known	chr8	-	581	3	FSM	ENSG00000187954.13	ENST00000530637.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	53.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGCTGCCACCACCA	17	True	NA	NA	False	GGGGCT	-21	NA	144465667	144464577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808_144465097_144465409
transcript_17781.known	chr1	+	924	4	FSM	ENSG00000163444.12	ENST00000543891.5	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_2	175.670777940505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCCATTCCAGAAAGCA	19	False	NA	NA	False	NA	NA	NA	203007402	203016094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203007864_203008642_203008811_203014888_203015049_203015959
transcript_177810.known	chr8	-	1477	2	FSM	ENSG00000187954.13	ENST00000403000.6	1477	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	-64	True	NA	-6	True	AATAAA	-29	NA	144465489	144463816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808
transcript_177811.known	chr8	-	592	2	FSM	ENSG00000187954.13	ENST00000524623.1	592	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTCTTGGCTGCCACCA	-3	True	NA	NA	False	GGGGCT	-18	NA	144465428	144464580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144465097_144465352
transcript_177823.nnic	chr8	+	3271	18	NNC	ENSG00000167702.13	novel	3272	18	NA	NA	-20	1	intron_retention	TRUE	canonical	3	30	junction_1	15.6711446642071	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGCTGCCTGGTGT	561	False	NA	22	True	AATAAA	-16	NA	144466022	144474116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144466103_144466460_144466519_144466759_144466839_144466958_144467111_144467202_144467342_144467484_144467631_144467713_144467780_144467858_144467988_144468328_144468651_144468724_144468835_144469270_144469380_144469489_144469648_144471941_144472047_144472137_144472260_144472360_144472485_144472576_144472707_144472794_144473052_144473131
transcript_177858.known	chr8	-	492	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	433.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCCAGTCCCCCGCCA	10	True	NA	NA	False	NA	NA	NA	144475823	144474872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144475057_144475156_144475224_144475582
transcript_177859.known	chr8	-	2017	3	FSM	ENSG00000160973.8	ENST00000377317.5	2017	3	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	87.5	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCAGGGCCGCGACCCAG	-16	True	NA	NA	False	NA	NA	NA	144475849	144473411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144475057_144475156_144475262_144475582
transcript_177862.known	chr8	+	3247	17	FSM	ENSG00000167702.13	ENST00000301332.3	3247	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	15.0208188857998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGCTGCCTGGTG	7	True	NA	21	True	AATAAA	-15	NA	144466354	144474115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144466519_144466759_144466839_144466958_144467111_144467202_144467342_144467484_144467631_144467713_144467780_144467858_144467988_144468328_144468407_144468535_144468651_144468724_144468835_144469270_144469380_144469489_144469648_144471941_144472047_144472137_144472260_144472360_144472485_144472576_144472707_144472794
transcript_17788.known	chr1	+	653	3	FSM	ENSG00000163485.17	ENST00000640524.1	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCCTGAAGACTCAGCC	-12	True	NA	NA	False	ACTAAA	-4	NA	203127707	203165089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203127929_203128784_203129183_203165055
transcript_177888.nic	chr8	+	2768	13	NIC	ENSG00000160972.10	novel	2864	12	NA	NA	-8	0	intron_retention	TRUE	canonical	3	22	junction_3	41.0385997162021	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	NA	False	NA	11	True	GATAAA	-18	NA	144477960	144502120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144478128_144490033_144490213_144496460_144497294_144497409_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_17789.known	chr1	+	3407	3	FSM	ENSG00000163485.17	ENST00000367236.8	3407	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	NA	False	NA	13	True	AATAAA	-16	NA	203127064	203167405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203127929_203128784_203129183_203165260
transcript_17790.known	chr1	+	2219	3	FSM	ENSG00000163485.17	ENST00000367235.1	2219	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCCTGCCCGTTGCCG	-8	True	NA	NA	False	NA	NA	NA	203128305	203166749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203128433_203128784_203129183_203165055
transcript_17791.known	chr1	+	2901	4	FSM	ENSG00000163485.17	ENST00000337894.9	2901	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.33999733546453	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	6	True	NA	13	True	AATAAA	-16	NA	203127725	203167405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203127929_203128277_203128433_203128784_203129183_203165260
transcript_177911.known	chr8	+	2864	12	FSM	ENSG00000160972.10	ENST00000435887.2	2864	12	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	24.3565118484049	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGTTGTGTGTTGTGTG	-50	True	NA	12	True	GATAAA	-19	NA	144477981	144502121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144478128_144490033_144490213_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_177920.nic	chr8	+	2947	12	NIC	ENSG00000160972.10	novel	2722	11	NA	NA	-58	0	intron_retention	FALSE	canonical	2	12	junction_1	44.5122325094485	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	261	False	NA	11	True	GATAAA	-18	NA	144478292	144502120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144478523_144490033_144490213_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_177935.nic	chr8	+	2951	11	NIC	ENSG00000160972.10	novel	2864	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	107	junction_1	24.3608292141298	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	NA	False	NA	11	True	GATAAA	-18	NA	144477960	144502120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144478128_144490033_144490213_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_17794.known	chr1	+	2729	2	FSM	ENSG00000159388.6	ENST00000290551.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGTGTAGAGAAGT	0	True	NA	15	True	AATAAA	-17	NA	203305518	203309602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203305749_203307103
transcript_177941.nnic	chr8	+	2709	11	NNC	ENSG00000160972.10	novel	747	5	NA	NA	-1333	0	intron_retention	FALSE	canonical	2	8	junction_1	47.65721351485	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	5841	False	NA	11	True	GATAAA	-18	NA	144496012	144502120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144496184_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_17795.known	chr1	+	1275	3	FSM	ENSG00000159388.6	ENST00000475157.1	1275	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTACTTTAATAAAAAT	NA	False	NA	-18	True	NA	NA	NA	203305490	203309569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203305749_203307103_203307689_203309137
transcript_17797.known	chr1	-	2943	3	FSM	ENSG00000122176.12	ENST00000354955.5	2943	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAAGAGTGGAGTCATT	5	True	NA	-5	True	AATAAA	-18	NA	203351122	203340627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_203342495_203347291_203348278_203351032
transcript_177972.known	chr8	+	2722	11	FSM	ENSG00000160972.10	ENST00000292539.8	2722	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	22.3716338250026	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGTTGTGTGTTGTGTG	NA	False	NA	12	True	GATAAA	-19	NA	144490029	144502121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144490213_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_177973.known	chr8	+	807	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	4630	False	NA	11	True	GATAAA	-18	NA	144501088	144502120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144501295_144501519
transcript_177975.known	chr8	+	1552	5	FSM	ENSG00000167700.9	ENST00000301327.5	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	46.6851154009498	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGTGCCTGGAATAT	-11	True	NA	32	True	AATAAA	-24	NA	144509069	144511213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144510016_144510359_144510508_144510597_144510723_144510793_144510904_144510990
transcript_17798.known	chr1	+	5769	3	FSM	ENSG00000188783.6	ENST00000343110.3	5769	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	6	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCGCTTC	2	True	NA	13	True	AATAAA	-22	NA	203475805	203491352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203475939_203483168_203484158_203486705
transcript_177991.known	chr8	+	1433	3	FSM	ENSG00000167700.9	ENST00000528047.5	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	240.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATAAAGCCACATGTGC	-1	True	NA	0	True	NA	NA	NA	144509079	144511181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144510016_144510597_144510904_144510990
transcript_178.known	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_2	5534.5	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_8586_10858_10992_11133
transcript_178019.known	chr8	-	3819	21	FSM	ENSG00000160957.15	ENST00000617875.6	3819	21	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_20	68.6727748092357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	-17	True	NA	-6	True	AATAAA	-21	NA	144517833	144511287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601_144517636_144517700
transcript_178025.nic	chr8	-	3708	21	NIC	ENSG00000160957.15	novel	3819	21	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	100.355605224621	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGGCCCTCTTGGC	9099	False	NA	-12	True	AATAAA	-15	NA	144517926	144511293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513415_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601_144517636_144517700
transcript_178047.known	chr8	-	3896	20	FSM	ENSG00000160957.15	ENST00000621189.4	3896	20	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_19	52.1030302551862	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	9180	False	144517865	-6	True	AATAAA	-21	NA	144517845	144511287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
transcript_178129.known	chr8	-	1762	5	FSM	ENSG00000254402.7	ENST00000529415.7	1762	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	7.03562363973514	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGCTGAGCCGTGTGT	-8	True	NA	-10	True	AGTAAA	-16	NA	144527033	144522387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144523410_144524109_144524279_144524440_144524720_144524815_144525034_144526959
transcript_17813.known	chr1	+	5917	18	FSM	ENSG00000058673.17	ENST00000367210.3	5917	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	168.76578229415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	-5	True	NA	17	True	AATAAA	-18	NA	203795622	203854124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203795795_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_178130.nnic	chr8	-	1778	5	NNC	ENSG00000213563.7	novel	1637	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	79.6127345341183	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	-24	True	NA	-39	True	NA	NA	NA	144529105	144526251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144526640_144526959_144527788_144528023_144528073_144528267_144528436_144528760
transcript_178131.known	chr8	+	5337	4	FSM	ENSG00000160959.8	ENST00000292524.6	5337	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	56.1505911713215	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	-5	True	NA	35	True	AATAAA	-23	NA	144517991	144525172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910
transcript_178133.nic	chr8	+	2135	4	NIC	ENSG00000160959.8	novel	2243	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	57.092517509351	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGCTGTTTTTTTTTC	8879	False	NA	33	True	NA	NA	NA	144517959	144522024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910
transcript_178135.nic	chr8	+	2356	4	NIC	ENSG00000160959.8	novel	1408	3	NA	NA	-330	6	intron_retention	FALSE	canonical	3	21	junction_2	26.6374840320094	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTAAAGCTCTGGG	4255	False	NA	41	True	AATAAA	-29	NA	144522251	144525178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144523334_144523635_144523810_144523923_144524106_144524260
transcript_178138.known	chr8	-	1637	4	FSM	ENSG00000213563.7	ENST00000534680.5	1637	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	48.8011839564939	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	NA	False	NA	-39	True	NA	NA	NA	144529132	144526251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144526640_144526959_144527788_144528023_144528073_144528760
transcript_178140.known	chr8	+	978	3	FSM	ENSG00000160959.8	ENST00000527730.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCTCAGGTGAGCGGG	-5	True	NA	NA	False	NA	NA	NA	144517991	144520811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144518042_144519700_144520055_144520237
transcript_178144.known	chr8	+	1408	3	FSM	ENSG00000160959.8	ENST00000528528.1	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	10.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAAGAAGGTGAAATCCA	36	True	NA	NA	False	NA	NA	NA	144522581	144524446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144523334_144523635_144524106_144524260
transcript_178148.known	chr8	-	802	3	FSM	ENSG00000213563.7	ENST00000532827.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	91	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGCCGCGGGCGCCTC	525	False	NA	NA	False	NA	NA	NA	144528556	144527323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144527788_144528023_144528073_144528267
transcript_178150.known	chr8	-	2455	3	FSM	ENSG00000213563.7	ENST00000524821.6	2455	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	16.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCATGGCTCCTGAAC	-30	True	NA	NA	False	NA	NA	NA	144529111	144525732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144527788_144528023_144528073_144528760
transcript_178151.nic	chr8	+	2394	2	ISM	ENSG00000160959.8	ENST00000528528.1	1408	3	-99	-732	-99	6	intron_retention	FALSE	canonical	3	85	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTAAAGCTCTGGG	4486	False	NA	41	True	AATAAA	-29	NA	144522482	144525178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_144523334_144523635
transcript_178152.known	chr8	+	93	2	FSM	ENSG00000160959.8	ENST00000530242.1	93	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGATCGTGAGGAAAAAG	726	False	NA	NA	False	NA	NA	NA	144523271	144524291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144523334_144524260
transcript_178157.nnic	chr8	-	4880	12	FSM	ENSG00000147799.12	ENST00000377307.7	4830	12	-50	0	-50	0	multi-exon	FALSE	canonical	3	59	junction_6	13.8062149138688	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTCCTCCCGTTCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	144685896	144529178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144530617_144530701_144530872_144532304_144532397_144533125_144533326_144534128_144534203_144537720_144537814_144545248_144545811_144547126_144548490_144555559_144555644_144580845_144581278_144605534_144605696_144685685
transcript_178166.nnic	chr8	-	3652	4	ISM	ENSG00000147799.12	ENST00000377307.7	4830	12	-50	23617	-50	-15038	5prime_fragment	FALSE	canonical	3	65	junction_2	7.07106781186548	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAACAAAAGCCAGGGA	NA	False	NA	NA	False	AATAAA	-42	NA	144685896	144552795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_144555644_144580845_144581278_144605534_144605696_144685685
transcript_178168.known	chr8	-	2953	5	FSM	ENSG00000198169.9	ENST00000292562.12	2953	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	26.6176633084123	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTTGGGCTTTGACA	-51	True	NA	-6	True	AATAAA	-20	NA	144755531	144720908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_178172.known	chr8	-	618	4	FSM	ENSG00000198169.9	ENST00000525191.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	29.4882274061286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTGGTGATTTAC	39	True	NA	0	True	AATATA	-22	NA	144755441	144753453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144753797_144754191_144754322_144754695_144754804_144755404
transcript_178177.known	chr8	-	1901	6	FSM	ENSG00000196378.13	ENST00000343459.8	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	25.4982352330509	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCATGTTCATTTTAG	-4	True	NA	0	True	ATTAAA	-25	NA	144787304	144773113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_178178.known	chr8	-	582	5	FSM	ENSG00000196378.13	ENST00000534445.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	32.4384031666172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGAGCAAAGTTTTGAA	6195	False	NA	NA	False	NA	NA	NA	144787345	144774353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144774606_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_178186.known	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_5	10634.3584592584	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	15	True	NA	-18	True	AATAAA	-17	NA	144792389	144789768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
transcript_178188.known	chr8	-	1041	6	FSM	ENSG00000161016.18	ENST00000262584.7	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	7798	junction_5	8905.32245345445	6200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGTGCCCACCCCC	953	False	NA	-19	True	AATAAA	-16	NA	144792587	144789769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792365
transcript_1782.nnic	chr1	+	3061	15	NNC	ENSG00000130762.15	novel	2822	15	NA	NA	-206	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	42.3124915217186	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	NA	False	NA	40	True	ATTAAA	-16	NA	3454458	3481113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_3454845_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
transcript_178203.known	chr8	-	1070	5	FSM	ENSG00000161016.18	ENST00000528957.6	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	14646	junction_2	8153.01598719762	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	14	True	NA	-18	True	AATAAA	-17	NA	144792390	144789768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991
transcript_178204.known	chr8	-	540	5	FSM	ENSG00000161016.18	ENST00000528296.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12287.3903250446	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	1415	False	NA	-18	True	AATAAA	-17	NA	144792125	144789768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791308_144791849_144791915_144791991
transcript_178205.known	chr8	-	717	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	14646	junction_2	9163.97297391621	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGCCCACCCCCAT	1581	False	NA	-17	True	AATAAA	-18	NA	144791959	144789767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
transcript_178206.known	chr8	-	745	5	FSM	ENSG00000161016.18	ENST00000532702.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	6847.42086482202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAACCCAGAAATGCA	20	True	NA	NA	False	NA	NA	NA	144792384	144790354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792265
transcript_178218.known	chr8	+	546	5	FSM	ENSG00000147789.16	ENST00000529767.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.6427005009183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAAAGTGACAGGCTT	15	True	NA	NA	False	NA	NA	NA	144827576	144841524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144829426_144829605_144837390_144837508_144841354
transcript_178220.known	chr8	+	2794	5	FSM	ENSG00000147789.16	ENST00000446747.7	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	32.7900518450337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	-3	True	NA	105	True	NA	NA	NA	144827558	144843772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144829444_144829605_144837390_144837508_144841354
transcript_178221.known	chr8	+	2738	5	FSM	ENSG00000147789.16	ENST00000527218.6	2738	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	35.038371822903	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	17	True	NA	105	True	NA	NA	NA	144827578	144843772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837393_144837508_144841354
transcript_178230.known	chr8	+	2125	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	38.0555150040335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	NA	False	NA	23	True	AATAAA	-19	NA	144827517	144843222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
transcript_178233.known	chr8	+	855	4	FSM	ENSG00000147789.16	ENST00000532382.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	18.263503375737	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGATTCTGAGG	-7	True	NA	NA	False	NA	NA	NA	144827554	144841475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829605_144837390_144837508_144841354
transcript_178239.known	chr8	+	569	3	FSM	ENSG00000147789.16	ENST00000532393.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	48	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAATGCCAAAAAAAGTT	21	True	NA	NA	False	AATACA	-19	NA	144827582	144841782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144837393_144837508_144841354
transcript_178248.known	chr8	-	1305	2	FSM	ENSG00000170619.10	ENST00000402718.4	1305	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCGTGTGATGCAG	-31	True	NA	-3	True	AATAAA	-30	NA	144853067	144850165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144851396_144852992
transcript_178249.known	chr8	-	1430	2	FSM	ENSG00000170619.10	ENST00000305103.4	1430	2	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCATCAGAGGATGGCG	-12	True	NA	-13	True	AATAAA	-20	NA	144853048	144850175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144851396_144852838
transcript_178250.known	chr8	-	849	2	FSM	ENSG00000170619.10	ENST00000529143.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCGAGCGTCCTGATG	897	False	NA	NA	False	NA	NA	NA	144852657	144850824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144851396_144852379
transcript_178255.known	chr8	-	6337	6	FSM	ENSG00000196150.14	ENST00000417550.7	6337	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	15.3022874107109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTGCAGTGAAGAA	-6	True	NA	NA	False	AATAAA	-17	NA	144901453	144876954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_178258.known	chr8	-	672	6	FSM	ENSG00000196150.14	ENST00000533622.5	672	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	26.4302856586909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCATGCCACTCACTCC	21	True	NA	NA	False	NA	NA	NA	144901426	144882654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901336
transcript_17826.known	chr1	+	5015	20	FSM	ENSG00000058673.17	ENST00000332127.8	5015	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	206.354802970857	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	78	False	NA	17	True	AATAAA	-18	NA	203795705	203854124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203795795_203796292_203796497_203801574_203801629_203802651_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_178261.known	chr8	-	593	5	FSM	ENSG00000196150.14	ENST00000533221.5	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	27.5352047386614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATGTGTGTTGAGTGT	24	True	NA	NA	False	NA	NA	NA	144901423	144882605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_178268.known	chr8	-	696	3	FSM	ENSG00000170631.15	ENST00000532351.5	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTATTCAGCGTCAA	30	True	NA	NA	False	NA	NA	NA	144950819	144932122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144932591_144946010_144946216_144950796
transcript_178269.known	chr8	-	568	3	FSM	ENSG00000170631.15	ENST00000527512.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	25.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTCTCCCAGGAGGGG	-26	True	NA	NA	False	NA	NA	NA	144950875	144932404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144932591_144945912_144946216_144950796
transcript_178270.known	chr8	-	2206	2	FSM	ENSG00000170631.15	ENST00000527427.1	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAGAAAAA	-26	True	NA	NA	False	NA	NA	NA	144950875	144944088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144946216_144950796
transcript_178272.known	chr8	-	876	5	FSM	ENSG00000196922.11	ENST00000690545.1	2085	5	9	1200	0	-385	multi-exon	FALSE	canonical	1	4	junction_2	7.17635004720366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAAGAGCCTATCAGA	1	True	NA	NA	False	NA	NA	NA	145002895	144978138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144978554_144994478_144994593_144996506_144996608_144999602_144999770_145002816
transcript_178273.known	chr8	-	1112	3	FSM	ENSG00000196922.11	ENST00000534037.7	1136	3	20	4	6	-4	multi-exon	FALSE	canonical	3	18	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTTGGGTGTAGGT	-16	True	NA	NA	False	ATTAAA	-14	NA	145002875	144995721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144996608_144999602_144999770_145002816
transcript_178274.known	chr8	-	1822	2	FSM	ENSG00000196922.11	ENST00000528327.1	1822	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9	True	NA	NA	False	NA	NA	NA	145002850	144997981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144999770_145002816
transcript_178277.known	chr8	+	2588	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	0	0	0	0	multi-exon	FALSE	canonical	1	228	junction_2	185.038509505454	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-3	True	NA	26	True	NA	NA	NA	145052466	145056030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
transcript_17828.known	chr1	+	1560	5	FSM	ENSG00000182004.13	ENST00000414487.7	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	6006	junction_1	598.494935233374	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGTTTGAAATTAAT	5	True	NA	4	True	AATAAA	-22	NA	203861598	203871152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203861714_203862195_203862223_203863662_203863726_203865040_203865120_203869876
transcript_178280.nic	chr8	+	335	2	ISM	ENSG00000182307.14	ENST00000331434.7	2588	5	-81	3222	-79	-629	5prime_fragment	FALSE	canonical	3	299	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGAACAGGGCCTCTGTG	529	False	NA	NA	False	AAGAAA	-2	NA	145052385	145052808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_145052498_145052585
transcript_178281.known	chr8	+	2676	4	FSM	ENSG00000182307.14	ENST00000530455.5	2676	4	0	0	0	0	multi-exon	FALSE	canonical	1	228	junction_1	189.6915625137	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-3	True	NA	26	True	NA	NA	NA	145052466	145056030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_145052898_145053061_145053147_145053296_145053444_145054017
transcript_178288.known	chr9	-	1771	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_15	489.133583208332	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	7	False	NA	NA	False	ATTAAA	-44	NA	179047	121059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_17829.known	chr1	+	532	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	2992.05660875592	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	9	True	NA	28	True	AATAAA	-28	NA	203861602	203870084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
transcript_178291.known	chr9	-	1792	15	FSM	ENSG00000172785.18	ENST00000377400.8	1792	15	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_8	397.077152838239	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGATGTTGACGACC	NA	False	NA	NA	False	AATAAA	-17	NA	179147	121040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_178298.known	chr9	-	1241	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	516.201958092433	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	33	False	NA	-6	True	AATAAA	-20	NA	179021	121408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_178301.known	chr9	-	2513	8	FSM	ENSG00000172785.18	ENST00000377447.7	2513	8	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	405.0420487116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGATTTAAGAATT	29	False	NA	NA	False	NA	NA	NA	179025	152913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_178303.known	chr9	-	1381	10	FSM	ENSG00000172785.18	ENST00000613988.4	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_9	428.129638841229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGTTCCTAAAACATC	NA	False	NA	NA	False	ATTAAA	-22	NA	179088	151576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_178306.known	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	698.90978594443	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	31	False	NA	NA	False	ATTAAA	-39	NA	179023	171952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_173367_175697_175785_177722_177821_178815
transcript_178307.known	chr9	-	1731	3	FSM	ENSG00000172785.18	ENST00000382393.2	1731	3	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_2	77	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	9	False	NA	NA	False	ATTAAA	-39	NA	179045	171952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_173367_175697_175785_178815
transcript_178313.known	chr9	+	5348	14	FSM	ENSG00000107104.21	ENST00000674102.1	5348	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	81.5726343485131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	-13	True	NA	15	True	AATAAA	-16	NA	504694	746103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_504755_539515_539634_540507_540668_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_178315.known	chr9	+	5070	12	FSM	ENSG00000107104.21	ENST00000382297.7	5070	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	28.0035416886407	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	-13	True	NA	15	True	AATAAA	-16	NA	504694	746103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_178319.known	chr9	+	5249	11	FSM	ENSG00000107104.21	ENST00000382293.7	5249	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	66.1676658194922	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	30	False	NA	15	True	AATAAA	-16	NA	706888	746103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_707248_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_178331.known	chr9	+	2215	5	FSM	ENSG00000137090.12	ENST00000382276.8	2215	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	0	True	NA	NA	False	AATAAA	-20	NA	841696	969090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_842193_846959_847144_893911_894196_916762_916908_967984
transcript_178332.known	chr9	+	2428	4	FSM	ENSG00000173253.16	ENST00000358146.7	2428	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGCCGAAGCAAATAGC	9	True	NA	NA	False	AATAAA	-28	NA	1050356	1057552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_1050776_1051569_1052139_1053721_1053825_1056215
transcript_178337.known	chr9	+	6853	4	FSM	ENSG00000080503.24	ENST00000636559.1	6853	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9.7410927974683	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACACACTGTAGTTTCC	-6	True	NA	NA	False	NA	NA	NA	2015346	2045869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465
transcript_178340.nic	chr9	-	1137	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-331	0	-331	0	multi-exon	FALSE	canonical	3	25	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	227	False	NA	0	True	AATAAA	-25	NA	2621752	2535651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
transcript_178342.known	chr9	-	887	4	FSM	ENSG00000236404.12	ENST00000453601.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	10.6144555520604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	NA	False	NA	0	True	AATAAA	-25	NA	2622373	2535651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2622099
transcript_178347.known	chr9	+	9213	19	FSM	ENSG00000147852.17	ENST00000382100.8	9213	19	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	51.3190516448657	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGCCTTTCCTTTCTC	4	True	NA	NA	False	AATAAA	-19	NA	2621786	2660056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651414_2651499_2651873_2651955_2652779_2652950_2653832
transcript_17835.nic	chr1	+	691	4	NIC	ENSG00000182004.13	novel	532	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	628	junction_1	3144.10732782596	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	21	False	NA	28	True	AATAAA	-28	NA	203861614	203870084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_203861956_203863662_203863726_203865040_203865120_203869876
transcript_178350.known	chr9	+	5723	18	FSM	ENSG00000147852.17	ENST00000681306.1	5723	18	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_12	20.4619657296774	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTCTTGATGAATA	99	False	NA	NA	False	TTTAAA	-18	NA	2622052	2656916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
transcript_178353.known	chr9	+	3239	18	FSM	ENSG00000147852.17	ENST00000681806.1	3239	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	47.6944571797891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCCTGTTCCTCTAG	87	False	NA	24	True	ATTAAA	-19	NA	2622040	2654485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646398_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
transcript_178360.known	chr9	+	4666	17	FSM	ENSG00000147852.17	ENST00000681618.1	4666	17	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	49.8384891424289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTAATTAATTATAAGG	-20	True	NA	-44	True	NA	NA	NA	2622109	2656039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
transcript_178366.known	chr9	-	2187	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_9	45.8259079651506	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCTGTCTCCTCTGTT	-7	True	NA	-20	True	TATAAA	-30	NA	2844095	2804151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_17837.known	chr1	+	967	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	6601	junction_1	458.779055997789	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATTGCTTCTTAC	9	True	NA	25	True	AATAAA	-25	NA	203861602	203870081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
transcript_178370.nic	chr9	-	1780	16	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-19	6215	-19	-6200	5prime_fragment	FALSE	canonical	3	777	junction_7	48.1800327475559	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAAGAAAATGGGAGAG	-26	True	NA	NA	False	GATAAA	-3	NA	2844114	2810366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_178376.nic	chr9	-	520	4	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-19	29879	-19	-5556	5prime_fragment	FALSE	canonical	3	779	junction_1	42.4578222082418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTCTACCTAAAGATGC	-26	True	NA	0	True	NA	NA	NA	2844114	2834030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_2834167_2837179_2837402_2838425_2838518_2844044
transcript_178377.nic	chr9	-	439	4	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-24	29965	-24	-5642	5prime_fragment	FALSE	canonical	3	779	junction_1	42.4578222082418	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTGAAGCAAAGCAGACA	-31	False	NA	-86	True	AAAAAG	-10	NA	2844119	2834116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_2834167_2837179_2837402_2838425_2838518_2844044
transcript_178379.known	chr9	+	2178	2	FSM	ENSG00000168263.9	ENST00000382082.4	2178	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGACTTGAGAAAATTTTT	-4	True	NA	9	True	AATAAA	-16	NA	2717509	2730037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2719096_2729445
transcript_17838.known	chr1	+	478	4	FSM	ENSG00000182004.13	ENST00000470492.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3434.35868184375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACATTGCTTC	15	True	NA	21	True	AATAAA	-21	NA	203861608	203870077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203861744_203863662_203863726_203865040_203865120_203869876
transcript_178381.known	chr9	-	9258	17	FSM	ENSG00000080298.16	ENST00000617270.5	9258	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_16	6.77195503529077	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAATGGCTTGGGTT	-9	True	NA	NA	False	AATAAA	-22	NA	3526001	3218296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_3225281_3228846_3228890_3248031_3248186_3256990_3257200_3262934_3263085_3266207_3266306_3270370_3270526_3271002_3271119_3275499_3275613_3277339_3277462_3288130_3288251_3293076_3293259_3301545_3301621_3330258_3330518_3346666_3346765_3395471_3395597_3525746
transcript_178385.known	chr9	+	3698	12	FSM	ENSG00000106688.12	ENST00000262352.8	3698	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	8.55318799006478	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCCTTTTTCTTCTTG	2	True	NA	9	True	AATAAA	-19	NA	4490467	4587469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4490771_4544566_4544708_4561448_4561542_4564343_4564459_4566046_4566090_4567668_4567768_4572203_4572389_4573906_4574015_4576000_4576124_4576568_4576764_4583037_4583173_4585311
transcript_178388.known	chr9	+	2965	1	FSM	ENSG00000205808.7	ENST00000381883.5	2965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGATGAAAACTTG	-20	True	NA	14	True	AATAAA	-20	NA	4662293	4665258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4662300_4665300
transcript_17839.known	chr1	+	4076	14	FSM	ENSG00000143842.15	ENST00000367204.6	4076	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	59.6110668411565	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCCTTGTGCAGGGGA	1	True	NA	21	True	AATAAA	-18	NA	204073114	204127743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204073712_204112914_204113135_204114320_204114433_204114518_204114606_204116506_204116680_204117121_204117191_204117592_204117708_204121899_204121986_204122236_204122400_204122853_204122964_204123111_204123209_204123660_204123805_204124640_204124858_204125857
transcript_178390.known	chr9	+	3500	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	20.5216687647201	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	-18	True	NA	14	True	AATAAA	-18	NA	4679568	4708399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
transcript_178393.nic	chr9	+	2009	6	ISM	ENSG00000106993.12	ENST00000381858.5	1244	7	-3	295	-3	-295	5prime_fragment	FALSE	canonical	3	201	junction_5	20.2721483814617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTCATATAGGCAGCAT	-31	True	NA	NA	False	NA	NA	NA	4679555	4702913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863
transcript_178398.nnic	chr9	-	3599	6	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	119.83088082794	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGGCACTATGTAAATA	-4	True	NA	NA	False	AATAAA	-22	NA	4741229	4712044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4726082_4727925_4740936
transcript_178399.known	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	23.4200768572607	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-6	True	NA	-7	True	AATAAA	-21	NA	4741202	4709555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
transcript_1784.known	chr1	+	2822	15	FSM	ENSG00000130762.15	ENST00000378378.9	2822	15	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	24.6349883917412	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	-4	True	NA	40	True	ATTAAA	-16	NA	3454664	3481113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3454812_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
transcript_178403.known	chr9	-	705	4	FSM	ENSG00000147853.17	ENST00000447596.4	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	126.625431884752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGTGTGTAACTATT	-2	True	NA	NA	False	ACTAAA	-41	NA	4741227	4712974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4740936
transcript_178407.known	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_3	11.3185412045899	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	9	True	NA	20	True	ATTAAA	-17	NA	4792943	4861066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_178411.nic	chr9	-	698	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	208	0	208	0	3prime_fragment	FALSE	canonical	3	61	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAAAAGCCTTTTT	492	False	NA	-38	True	ATTAAA	-11	NA	5304224	5299875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_5300445_5304095
transcript_178416.nic	chr9	-	1089	6	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	115.111076791072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-16	True	NA	-6	True	AATAAA	-20	NA	5437876	5357970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437631
transcript_178417.known	chr9	-	981	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	42.218479366268	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-4	True	NA	-6	True	AATAAA	-20	NA	5437925	5357970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
transcript_178422.nnic	chr9	-	858	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_3	111.757270457004	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-29	True	NA	-6	True	AATAAA	-20	NA	5437889	5357970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437788
transcript_178424.nnic	chr9	-	850	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-53	-97	combination_of_known_splicesites	FALSE	canonical	3	62	junction_3	111.757270457004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGAGGTGCTCTAAATA	570	False	NA	-103	True	AATAAA	-23	NA	5437978	5358067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437788
transcript_178426.known	chr9	+	6786	26	FSM	ENSG00000107036.12	ENST00000414202.7	6786	26	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_3	9.05944810681092	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTTTATTCATCATCT	-1	True	NA	13	True	AATAAA	-14	NA	5629106	5776557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_5629454_5656582_5656691_5689958_5690039_5713895_5714004_5720181_5720325_5720613_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969_5769257_5770086_5770279_5772563_5772742_5772891_5773081_5773957
transcript_178428.known	chr9	-	5377	15	FSM	ENSG00000099219.15	ENST00000339450.10	5377	15	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_5	36.06661919848	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTATCTTTTTAAC	-35	True	NA	-29	True	AATAAA	-13	NA	5833117	5784571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_5787309_5787429_5787594_5797816_5797933_5798805_5799009_5801175_5801329_5805026_5805218_5805610_5805786_5810010_5810232_5811110_5811324_5812124_5812218_5812888_5813036_5823895_5824002_5825091_5825220_5830726_5831029_5832689
transcript_178437.known	chr9	-	4600	1	FSM	ENSG00000137040.10	ENST00000259569.6	4600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	-4	True	NA	-7	True	AATAAA	-31	NA	6015624	6011024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_6011000_6015600
transcript_178441.known	chr9	+	3576	16	FSM	ENSG00000147854.17	ENST00000276893.10	3576	16	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_4	15.1017291136552	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	-4	True	NA	33	True	AATAAA	-20	NA	6413198	6507054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6413644_6420911_6421143_6433913_6434174_6460572_6460792_6475390_6475501_6477621_6477809_6481642_6481767_6481991_6482100_6486820_6486926_6493825_6493933_6497197_6497361_6498017_6498159_6499834_6499932_6500551_6500710_6504592_6504692_6506032
transcript_178444.known	chr9	+	802	3	FSM	ENSG00000147854.17	ENST00000381373.3	802	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAATGGCAGTTTTGCTTT	95	False	NA	NA	False	AATAAA	-15	NA	6413417	6422979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6413644_6420911_6421143_6422634
transcript_178453.known	chr9	-	3843	25	FSM	ENSG00000178445.10	ENST00000321612.8	3843	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	128.406553787396	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCTTTCTCTTGGTGT	-11	True	NA	-1	True	AATAAA	-17	NA	6645729	6532466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613_6644693_6645244
transcript_178464.known	chr9	+	526	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	135	245	81	-245	multi-exon	FALSE	canonical	3	25	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	55	False	NA	7	True	AATAAA	-16	NA	6645955	6670635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6646086_6669543_6669729_6670424
transcript_178467.known	chr9	+	4338	22	FSM	ENSG00000107077.19	ENST00000381309.8	4338	22	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	13.7147817370616	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	13	True	NA	5	True	AATAAA	-18	NA	6757972	7175648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
transcript_178468.known	chr9	+	4601	21	FSM	ENSG00000107077.19	ENST00000381306.7	4601	21	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	14.0366484603697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCAAAAAAAAACTCA	11	False	NA	NA	False	CATAAA	-43	NA	6757655	7170932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797
transcript_178470.known	chr9	+	3332	18	FSM	ENSG00000107077.19	ENST00000543771.5	3332	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_17	24.4558779314488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGATTAGTGCTTGTAA	-7	True	NA	NA	False	ATTAAA	-18	NA	6758142	7077263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7076433
transcript_178473.known	chr9	+	1439	8	FSM	ENSG00000107077.19	ENST00000489243.5	1439	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	16.2819544532076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTAGCAAGAGATGG	40	False	NA	NA	False	AAAACA	-27	NA	6758102	6893632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094
transcript_178475.known	chr9	+	1406	4	FSM	ENSG00000107077.19	ENST00000401787.7	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	20.8219969156552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTATATTGTCCTTTT	9	True	NA	NA	False	ATTAAA	-18	NA	6757653	6815149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630
transcript_178476.known	chr9	-	2456	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCAAAGTGTGTTTGG	-2	True	NA	NA	False	AATAAA	-20	NA	7799778	7796499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_7798638_7799460
transcript_178479.known	chr9	+	348	1	FSM	ENSG00000212829.8	ENST00000470205.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	23	False	NA	NA	False	NA	NA	NA	9090897	9091245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_9090900_9091200
transcript_178480.known	chr9	+	2683	2	FSM	ENSG00000153714.6	ENST00000319264.4	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCACTGATCTTTTC	-1	True	NA	NA	False	ATTAAA	-16	NA	12775019	12823060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_12776028_12821385
transcript_178489.nic	chr9	-	1850	11	ISM	ENSG00000107186.17	ENST00000447879.6	6441	46	-158	99060	-30	0	5prime_fragment	FALSE	canonical	3	54	junction_10	21.5722043379901	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAATCCTATGTTAAT	-37	True	NA	-4	True	NA	NA	NA	13279722	13205919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
transcript_178490.nnic	chr9	-	1686	11	NNC	ENSG00000107186.17	novel	7603	46	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_10	20.5659913449364	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAATCCTATGTTAAT	-37	True	NA	-4	True	NA	NA	NA	13279722	13205919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279563
transcript_178491.known	chr9	-	2869	12	FSM	ENSG00000147862.18	ENST00000397575.7	2869	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	6.31540161198487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGGAAAAAAACAGT	2	True	NA	NA	False	AAAAAG	-27	NA	14314069	14087571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14088327_14102421_14102511_14112998_14113082_14116207_14116347_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_178492.known	chr9	-	3129	10	FSM	ENSG00000147862.18	ENST00000397579.6	3129	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.45690184791497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAATGAAAAAAA	11	True	NA	NA	False	NA	NA	NA	14314582	14087602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14088327_14102421_14102511_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_178493.known	chr9	-	8198	9	FSM	ENSG00000147862.18	ENST00000380959.7	8198	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4.715334028465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	8400	False	NA	-1	True	AATAAA	-18	NA	14313985	14081847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14088327_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_178508.known	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_1	0	1030	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	0	True	NA	9	True	NA	NA	NA	14722733	14719723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14720387_14722165
transcript_17851.known	chr1	+	3525	7	FSM	ENSG00000143842.15	ENST00000367203.8	3525	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	67.2879384932149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCATGGTGGCCTGTG	1	True	NA	NA	False	NA	NA	NA	204073114	204119859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204073712_204112914_204113135_204114320_204114433_204114518_204114606_204116506_204116680_204117121_204117191_204117592
transcript_178513.nic	chr9	-	955	4	ISM	ENSG00000164946.20	ENST00000427623.5	1421	11	26930	-214	26930	0	3prime_fragment	FALSE	canonical	1	22	junction_1	6.59966329107444	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGGTTTGTTTATTCC	NA	False	NA	-47	True	AATAAA	-19	NA	14747231	14737151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_14737596_14740148_14740235_14746352_14746469_14746922
transcript_178516.known	chr9	-	10483	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	10.3765663971232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	NA	False	NA	-4	True	AATAAA	-16	NA	15307360	15163621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_17852.known	chr1	-	2475	8	FSM	ENSG00000143845.15	ENST00000367202.9	2475	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	24.5398468135531	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-14	True	NA	-1	True	ATTAAA	-16	NA	204152044	204131061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204132257_204134514_204134589_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
transcript_178523.nic	chr9	-	550	5	ISM	ENSG00000155158.20	ENST00000505732.5	1881	15	101	24679	-50	2872	5prime_fragment	FALSE	canonical	3	61	junction_2	9.06917857360853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGACGAGTCATTAAATA	NA	False	NA	4	True	NA	NA	NA	15307259	15211265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_178525.known	chr9	-	3364	16	FSM	ENSG00000164985.15	ENST00000380738.8	3364	16	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_15	326.733054478559	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTAGTAAATTACTTT	165	False	NA	-30	True	ATTAAA	-17	NA	15510995	15464065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_178526.known	chr9	-	3342	16	FSM	ENSG00000164985.15	ENST00000380733.9	3342	16	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_15	444.363544859386	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTAGTAAATTACTTT	-4	True	NA	-30	True	ATTAAA	-17	NA	15510970	15464065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
transcript_178536.known	chr9	-	1889	11	FSM	ENSG00000164985.15	ENST00000380716.8	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	679.338472339084	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTTTAGATATTTTT	166	False	NA	0	True	AATAAA	-20	NA	15510994	15470635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15471232_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_17854.known	chr1	-	2431	8	FSM	ENSG00000143845.15	ENST00000367201.7	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	74.7217969455735	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-2	True	NA	-1	True	ATTAAA	-16	NA	204151894	204131061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204132257_204134514_204134695_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
transcript_178541.known	chr9	+	2524	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	60.0255089807247	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	4	True	NA	7	True	TATAAA	-16	NA	15422868	15462460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
transcript_178547.known	chr9	+	5680	9	FSM	ENSG00000164975.16	ENST00000380821.8	3000	9	-172	-2508	-30	1674	multi-exon	TRUE	canonical	3	321	junction_4	17.5209695793355	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	NA	False	NA	NA	False	AATAAA	-4	NA	15422703	15464134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718
transcript_178554.nic	chr9	-	1328	9	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-166	3385	-165	-1940	5prime_fragment	FALSE	canonical	3	1232	junction_8	417.101531404525	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTGAAAAGGTATAAAG	0	True	NA	-8	True	NA	NA	NA	15511160	15474020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_178555.nic	chr9	-	1194	9	ISM	ENSG00000164985.15	ENST00000380733.9	3342	16	-53	9955	-28	-1940	5prime_fragment	FALSE	canonical	3	709	junction_8	585.64172868316	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTGAAAAGGTATAAAG	137	False	NA	-8	True	NA	NA	NA	15511023	15474020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
transcript_178558.nic	chr9	-	1125	9	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-21	3443	-20	-1998	5prime_fragment	FALSE	canonical	3	1232	junction_8	417.101531404525	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCTAAAACAGGGGTTA	145	False	NA	-18	True	GATAAA	-39	NA	15511015	15474078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_178559.nic	chr9	-	1136	9	ISM	ENSG00000164985.15	ENST00000380733.9	3342	16	-53	10013	-28	-1998	5prime_fragment	FALSE	canonical	3	709	junction_8	585.64172868316	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCTAAAACAGGGGTTA	137	False	NA	-18	True	GATAAA	-39	NA	15511023	15474078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
transcript_178561.nic	chr9	-	985	9	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-10	3572	-9	-2127	5prime_fragment	FALSE	canonical	3	1232	junction_8	417.101531404525	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGCAAGAGGAAAAACAAC	-1	True	NA	-62	True	AAGAAA	-3	NA	15511004	15474207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_178562.nic	chr9	-	1007	9	ISM	ENSG00000164985.15	ENST00000380733.9	3342	16	-53	10142	-28	-2127	5prime_fragment	FALSE	canonical	3	709	junction_8	585.64172868316	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGCAAGAGGAAAAACAAC	137	False	NA	-62	True	AAGAAA	-3	NA	15511023	15474207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
transcript_17857.nic	chr1	-	2352	7	NIC	ENSG00000143845.15	novel	2475	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_5	81.4897744096358	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-14	True	NA	-1	True	ATTAAA	-16	NA	204152044	204131061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_204132257_204134514_204134589_204137103_204137250_204140034_204140119_204141314_204141458_204149702_204149963_204151594
transcript_178571.nic	chr9	-	752	6	ISM	ENSG00000164985.15	ENST00000380715.5	1966	11	18	15369	-3	-102	5prime_fragment	FALSE	canonical	3	1232	junction_5	458.918554865675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTCACTGACTTACCAA	-7	True	NA	0	True	NA	NA	NA	15510973	15486004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_178579.known	chr9	-	736	4	FSM	ENSG00000164985.15	ENST00000488797.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	961.512119297284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCCATGTTGTTCTTG	169	False	NA	NA	False	NA	NA	NA	15510991	15491951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15492226_15506560_15506638_15510116_15510327_15510816
transcript_178582.known	chr9	-	2065	3	FSM	ENSG00000164985.15	ENST00000484265.1	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	836.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGGCCTTATTCTAG	171	False	NA	NA	False	NA	NA	NA	15510989	15504958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15506638_15510116_15510330_15510816
transcript_178584.known	chr9	-	12808	7	FSM	ENSG00000173068.18	ENST00000380672.9	12808	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	17.5023807904334	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTTACCTTTCTGAT	-1	True	NA	-1	True	ATTAAA	-18	NA	16870670	16409502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_16419650_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
transcript_178593.known	chr9	+	4871	7	FSM	ENSG00000044459.15	ENST00000380641.4	4871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	27.9090785707208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTCATTATAGTGTA	-2	True	NA	23	True	AATAAA	-35	NA	17135039	17302051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
transcript_178595.nic	chr9	+	810	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-59	65587	-1	-65587	5prime_fragment	FALSE	canonical	3	61	junction_3	10.5682306939241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGGAGGAGGAAAACAAGA	NA	False	NA	NA	False	TATAAA	-4	NA	17134980	17236464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_178596.nic	chr9	+	910	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-59	65487	-1	-65487	5prime_fragment	FALSE	canonical	3	61	junction_3	10.5682306939241	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCACTGATGCAAAAAT	NA	False	NA	NA	False	AAGAAA	-3	NA	17134980	17236564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_178599.known	chr9	+	2617	9	FSM	ENSG00000107295.10	ENST00000380607.5	2617	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	2.9474565306379	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGCTCTGCTCCTTCA	-2	True	NA	28	True	AATAAA	-18	NA	17579065	17797124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_17579288_17747065_17747135_17761436_17761510_17786380_17786525_17787379_17787514_17789391_17789551_17791230_17791335_17793366_17793498_17795543
transcript_17860.nnic	chr1	-	2398	7	NIC	ENSG00000143845.15	novel	2475	8	NA	NA	0	-3	intron_retention	FALSE	canonical	2	8	junction_1	85.0635383437319	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGCTGTGTCTTGAGTG	-14	True	NA	-4	True	ATTAAA	-13	NA	204152044	204131064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_204132257_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
transcript_178601.known	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	3	True	NA	15	True	AATAAA	-19	NA	19049426	19051025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_19049400_19051000
transcript_178602.known	chr9	-	6323	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_2	73.759083127097	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGGAATTTCCTATA	20	True	NA	-17	True	AATAAA	-15	NA	19102904	19053140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_178609.nic	chr9	-	1984	15	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-45	7026	-45	-1403	5prime_fragment	FALSE	canonical	3	254	junction_9	34.1748206629814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGAACTAATTGACTC	-25	True	NA	NA	False	AATAAA	-2	NA	19102949	19060166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_17861.known	chr1	-	776	5	FSM	ENSG00000174567.8	ENST00000308302.4	776	5	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	9.62743475698485	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-5	True	NA	-6	True	ATTAAA	-20	NA	204213988	204198162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204198497_204199194_204199259_204201632_204201812_204202895_204202988_204213881
transcript_178612.nic	chr9	-	1839	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-45	9955	-45	-4332	5prime_fragment	FALSE	canonical	3	254	junction_8	24.9078776065707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACAGAGAGTAGTGCAT	-25	True	NA	NA	False	NA	NA	NA	19102949	19063095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_178613.nic	chr9	-	1773	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-45	10021	-45	-4398	5prime_fragment	FALSE	canonical	3	254	junction_8	24.9078776065707	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCAATTTCTAAGAAAA	-25	True	NA	NA	False	AAGAAA	-5	NA	19102949	19063161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_178616.nic	chr9	-	1742	13	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-45	10372	-45	-4749	5prime_fragment	FALSE	canonical	3	254	junction_7	25.8902598587877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTTAAAATAAGTCTC	-25	True	NA	NA	False	NA	NA	NA	19102949	19063512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_178620.known	chr9	-	1897	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	33.4352862608792	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTTGTTCCATATG	-3	True	NA	-15	True	AATAAA	-25	NA	19127492	19115760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_178626.nic	chr9	-	717	5	ISM	ENSG00000147872.10	ENST00000276914.7	1897	8	-26	5119	-26	220	5prime_fragment	FALSE	canonical	3	254	junction_1	30.5481177816245	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGGAATTTTATCTTG	NA	False	NA	0	True	NA	NA	NA	19127518	19120879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_178637.known	chr9	-	1369	6	FSM	ENSG00000137154.13	ENST00000380394.9	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	2269.42958471947	5796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGTATGTACTTTT	-2	True	NA	NA	False	ACTAAA	-24	NA	19380236	19375714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
transcript_17864.nic	chr1	-	1644	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-170	0	intron_retention	FALSE	canonical	3	54	junction_1	4.49691252107735	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	NA	False	NA	-6	True	ATTAAA	-20	NA	204214158	204198162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_204199259_204201632_204201812_204202895_204202988_204213881
transcript_178652.known	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	2345.21006521804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	0	True	NA	-31	True	AATAAA	-2	NA	19380206	19376269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
transcript_178656.known	chr9	-	6724	11	FSM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	3.01496268633627	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAATTGGATGTGATG	3	True	NA	NA	False	AATAAA	-23	NA	20622499	20341668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_178666.nic	chr9	+	5819	44	FSM	ENSG00000188352.13	ENST00000338382.11	5794	44	-27	2	-27	0	multi-exon	TRUE	canonical	2	74	junction_1	33.644886189207	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCGTGTGACTTT	NA	False	NA	11	True	AGTAAA	-12	NA	20684231	20995948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_20684294_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
transcript_178669.nnic	chr9	+	802	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	4	-96205	intron_retention	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATCAAGTTGTAAAAGT	NA	False	NA	13	True	AATAAA	-24	NA	20658312	20673907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_20658827_20673619
transcript_178670.known	chr9	+	5765	43	ISM	ENSG00000188352.13	ENST00000338382.11	5794	44	31062	-5	-10965	0	3prime_fragment	FALSE	canonical	2	126	junction_34	29.6887099944371	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGACTTTTGTTTTA	5068	False	NA	18	True	AGTAAA	-19	NA	20715320	20995955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
transcript_178671.known	chr9	-	8277	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.72581562625261	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTCAGAAATGTGT	-6	True	NA	NA	False	AATAAA	-26	NA	21031640	20999508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_178672.known	chr9	-	2702	4	FSM	ENSG00000171889.6	ENST00000304425.4	2702	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.71547606649408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGGGCAGTGAGCCCC	13	True	NA	NA	False	NA	NA	NA	21559831	21453846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559488
transcript_178673.known	chr9	-	2557	4	FSM	ENSG00000171889.6	ENST00000654736.1	2557	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCCTTTACTGATT	4485	False	NA	NA	False	ATTAAA	-10	NA	21559900	21453801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559747
transcript_178678.known	chr9	+	6032	8	FSM	ENSG00000099810.21	ENST00000644715.2	6032	8	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_6	20.6150331514828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTCTTATTTTTATTTT	-17	True	NA	5	True	ATTAAA	-17	NA	21802635	21867081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_178685.known	chr9	+	1434	8	FSM	ENSG00000099810.21	ENST00000460874.6	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	121.843827776982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAATCTCTACTTTCCT	-11	True	NA	NA	False	AATAAA	-7	NA	21802641	21862320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802951_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_178691.known	chr9	+	2241	8	FSM	ENSG00000099810.21	ENST00000419385.5	2241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	131.558476173378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTATTGTTATTT	4	True	NA	28	True	AATAAA	-21	NA	21802656	21863286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802782_21815432_21815545_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_178692.known	chr9	+	1309	8	FSM	ENSG00000099810.21	ENST00000580718.1	1309	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	132.763407793637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTTTGGTTATTTA	9	True	NA	NA	False	AAGAAA	-1	NA	21802661	21862367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859285_21859426_21861975
transcript_178693.known	chr9	+	310	2	FSM	ENSG00000099810.21	ENST00000580675.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTTTGGCAGCC	-6	True	NA	NA	False	ATTAAA	-15	NA	21802646	21815607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802782_21815432
transcript_178694.known	chr9	-	978	3	FSM	ENSG00000147889.18	ENST00000304494.10	978	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTCAACATTTATTG	7	True	NA	0	True	AATAAA	-29	NA	21974857	21967751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21968243_21970901_21971209_21974677
transcript_178695.known	chr9	-	1052	3	FSM	ENSG00000147889.18	ENST00000579755.2	1052	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTCAACATTTATTG	1	True	NA	0	True	AATAAA	-29	NA	21994392	21967751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21968243_21970901_21971209_21994138
transcript_178698.known	chr9	-	3853	2	FSM	ENSG00000147883.12	ENST00000276925.7	3853	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTCATTTTTA	6	True	NA	-4	True	AATAAA	-19	NA	22009305	22002902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_22006248_22008797
transcript_178700.known	chr9	+	5586	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTATGCTACATT	0	True	NA	11	True	AATAAA	-14	NA	22446823	22455740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_22447733_22451063
transcript_178709.known	chr9	-	3763	6	FSM	ENSG00000107105.15	ENST00000223951.10	3763	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	30.1688581156132	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	4884	False	NA	-1	True	AATAAA	-17	NA	23821480	23690103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821226
transcript_178710.known	chr9	-	1476	1	FSM	ENSG00000198680.6	ENST00000358022.6	1476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAAGGTTGCGGCGAGT	-24	True	NA	-11	True	AATAAA	-20	NA	25678444	25676968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_25677000_25678400
transcript_178712.known	chr9	-	1532	6	FSM	ENSG00000120159.13	ENST00000625311.1	1532	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	122.470567892862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTTTTAACTATGTAG	-15	True	NA	NA	False	ATTAAA	-18	NA	26892442	26841735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892258
transcript_178713.known	chr9	-	2789	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_5	18.2909813842779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	-7	True	NA	-2	True	ATTAAA	-18	NA	26892802	26840684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
transcript_178726.nic	chr9	-	675	3	ISM	ENSG00000120159.13	ENST00000650615.1	2952	8	-27	45411	-16	-16196	5prime_fragment	FALSE	canonical	3	338	junction_2	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAAGATTCTTGAGGGT	-24	True	NA	NA	False	ATTAAA	-44	NA	26892819	26886121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_26886189_26887312_26887514_26892412
transcript_178728.known	chr9	+	2163	20	FSM	ENSG00000096872.17	ENST00000443698.5	2163	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	43.6383398990071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	25	False	NA	NA	False	AATAAA	-14	NA	26947311	27062925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26947464_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_178729.known	chr9	+	5325	20	FSM	ENSG00000096872.17	ENST00000380062.10	5325	20	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_8	17.9591719173151	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTATTTGTAATTTA	-13	True	NA	NA	False	ATTAAA	-27	NA	26956411	27066134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_178733.known	chr9	+	1462	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	49.9966862807252	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCGTGTGATTTACCAAA	-7	True	NA	NA	False	AATAAA	-21	NA	26956478	27036800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
transcript_178734.nic	chr9	+	1160	12	ISM	ENSG00000096872.17	ENST00000429045.6	1462	14	-129	18113	0	-18113	5prime_fragment	FALSE	canonical	3	153	junction_8	17.1960018416736	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATCTTTATACTAGG	1963	False	NA	NA	False	ATTAAA	-36	NA	26956349	27018687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646
transcript_178737.known	chr9	+	2432	21	FSM	ENSG00000096872.17	ENST00000648373.1	2432	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	58.286018906767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAATAGTAAATAGT	1963	False	NA	NA	False	NA	NA	NA	26956349	27062884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_26992382_26992678_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_178742.known	chr9	-	4724	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	0	0	0	multi-exon	TRUE	canonical	3	303	junction_5	33.3408078404771	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATATACCCATTTCTT	5	True	NA	-5	True	AATAAA	-16	NA	26947242	26903371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_178744.nic	chr9	-	2938	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	-256	538	combination_of_known_junctions	FALSE	canonical	3	154	junction_4	67.715704726944	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTGAGATTTTCCTG	6760	False	NA	-11	True	AATAAA	-14	NA	26947498	26905344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_178746.known	chr9	-	2041	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	34.2818181483357	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	14	True	NA	-25	True	AATAAA	-23	NA	26947233	26907802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_178748.nic	chr9	-	2001	12	NIC	ENSG00000137055.15	novel	2041	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	154	junction_3	70.6494079449729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	-15	True	NA	-25	True	AATAAA	-23	NA	26947262	26907802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_178750.known	chr9	+	4683	23	FSM	ENSG00000120156.22	ENST00000380036.10	4683	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	21.6367456039622	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGTGTGTCTCATAG	-1	True	NA	23	True	AATAAA	-23	NA	27109224	27230174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
transcript_178754.known	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	11.5181016954473	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-36	True	NA	-3	True	AATAAA	-17	NA	27529814	27325208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
transcript_178756.known	chr9	-	3231	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	22.8142499328819	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-5	True	NA	-3	True	AATAAA	-17	NA	27573481	27546545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_178758.known	chr9	+	3601	22	FSM	ENSG00000122729.19	ENST00000379923.5	3601	22	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	198.281265674446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGACTTTGAGTTTTG	-46	True	NA	27	True	AATGAA	-24	NA	32384619	32450836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_32384736_32386370_32386439_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_178759.known	chr9	+	7443	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_9	57.1742949235056	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	-23	True	NA	NA	False	ATTAAA	-16	NA	32384642	32454769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_178768.known	chr9	-	4628	18	FSM	ENSG00000107201.11	ENST00000379883.3	4628	18	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_2	33.3228934054877	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	28	True	NA	NA	False	TATAAA	-4	NA	32526196	32455301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32526060
transcript_178774.known	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2366	junction_1	167.286181935827	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-9	True	NA	-7	True	AATAAA	-14	NA	32573159	32553000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
transcript_178776.known	chr9	-	4131	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	37	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTACATTGGTAGTT	18	True	NA	-8	True	AATAAA	-21	NA	32552586	32540543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32544327_32550773_32550969_32552433
transcript_178786.known	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	1129.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-3	True	NA	-19	True	AATAAA	-8	NA	32573184	32553532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32553945_32558909_32558955_32572880
transcript_178787.known	chr9	-	666	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	1313.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACGGTATGGAAAA	-9	True	NA	22	True	NA	NA	NA	32573159	32553650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32553945_32570959_32571053_32572880
transcript_178788.known	chr9	+	5342	2	FSM	ENSG00000188133.6	ENST00000342743.6	5342	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGTCCAGTTCACATA	-4	True	NA	NA	False	AATAAA	-19	NA	32783539	32789201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_32783806_32784125
transcript_178791.known	chr9	-	2057	9	FSM	ENSG00000137074.20	ENST00000479656.6	2057	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	148.365627336658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTATTCAGTTG	-6	True	NA	-15	True	AATAAA	-8	NA	33001613	32972621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_32997242_32997349_33001566
transcript_178792.known	chr9	-	1938	9	FSM	ENSG00000137074.20	ENST00000379819.6	1938	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	166.21597396159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTAGGTGGAAACTATT	-13	True	NA	-4	True	AATAAA	-25	NA	33001620	32972752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_32997242_32997349_33001566
transcript_178794.known	chr9	-	1914	9	FSM	ENSG00000137074.20	ENST00000465003.6	1914	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	154.038905394059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	24	True	NA	-13	True	AATAAA	-10	NA	33001583	32972619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_32997242_32997349_33001566
transcript_178798.known	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	156.710574249578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-21	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_178799.nic	chr9	-	1874	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	-37	86015	-4	0	5prime_fragment	FALSE	canonical	3	103	junction_5	117.763339293825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-38	True	NA	-9	True	AATAAA	-14	NA	33001645	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
transcript_178800.known	chr9	-	2101	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	145.693135719973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-13	True	NA	-30	True	AAAAAG	-32	NA	33025130	32972636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
transcript_178801.known	chr9	-	1814	8	FSM	ENSG00000137074.20	ENST00000485479.6	1814	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	164.429502293505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTTTTTCCCTGAGA	3	True	NA	-47	True	AAAAAG	-15	NA	33025065	32972653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988091_32988125_32989758_32989896_33024999
transcript_178802.nic	chr9	-	1879	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	115.212137965988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-38	True	NA	-9	True	AATAAA	-14	NA	33001645	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001566
transcript_178805.nic	chr9	-	1989	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_6	103.004061738816	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-38	True	NA	-9	True	AATAAA	-14	NA	33001645	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_178806.known	chr9	-	1938	8	FSM	ENSG00000137074.20	ENST00000467331.6	1938	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	163.479138031214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	3215	False	NA	-30	True	AAAAAG	-32	NA	33024852	32972636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33024803
transcript_178808.known	chr9	-	1345	8	FSM	ENSG00000137074.20	ENST00000463596.6	1345	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	157.24490193222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	85	False	NA	-11	True	ATTAAA	-21	NA	33001522	32973375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001332
transcript_178809.nic	chr9	-	2016	8	NIC	ENSG00000137074.20	novel	2099	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	128.515384610686	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-9	True	NA	-9	True	AATAAA	-14	NA	33001616	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001515
transcript_178810.known	chr9	-	1977	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	139.687844415865	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-21	True	NA	-9	True	AATAAA	-14	NA	33001628	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_178811.nic	chr9	-	2066	8	NIC	ENSG00000137074.20	novel	2099	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	138.154158202247	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	2917	False	NA	-9	True	AATAAA	-14	NA	33025150	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33024999
transcript_178813.known	chr9	-	1740	8	FSM	ENSG00000137074.20	ENST00000397172.8	1740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.934786086014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	0	True	NA	-9	True	AATAAA	-14	NA	33001607	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987759_32987847_32988082_32988130_32989758_32989896_33001566
transcript_178822.nic	chr9	-	1114	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	-37	86775	-4	0	5prime_fragment	FALSE	canonical	3	103	junction_5	117.763339293825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-38	True	NA	-11	True	ATTAAA	-21	NA	33001645	32973375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
transcript_178826.known	chr9	-	2099	8	FSM	ENSG00000137074.20	ENST00000494649.5	2099	8	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_7	129.455847015616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	86	False	NA	-9	True	AATAAA	-14	NA	33001521	32972615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001332
transcript_178827.nic	chr9	-	1229	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_6	103.004061738816	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-38	True	NA	-11	True	ATTAAA	-21	NA	33001645	32973375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_178835.known	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	154.401802666506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	12	True	NA	42	True	NA	NA	NA	33001595	32972706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
transcript_178836.known	chr9	-	1068	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	127.93542207779	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-34	True	NA	-11	True	ATTAAA	-21	NA	33001641	32973375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_17885.known	chr1	-	7658	33	FSM	ENSG00000133056.14	ENST00000684373.1	7658	33	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_32	8.71040146893356	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTATAATTTTATTTA	7	True	NA	NA	False	AATAAA	-19	NA	204494805	204422632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204425041_204425612_204425742_204427647_204427755_204428138_204428221_204429920_204430039_204431668_204431794_204432199_204432402_204433315_204433426_204433792_204433950_204434438_204434609_204438934_204439072_204440191_204440322_204441470_204441564_204442525_204442634_204443416_204443598_204444067_204444163_204444330_204444425_204445955_204446145_204447435_204447579_204449184_204449297_204449849_204450018_204454668_204454792_204455855_204456052_204457036_204457071_204457727_204457875_204459877_204459942_204460323_204460404_204460549_204460662_204464011_204464133_204464449_204464605_204465218_204465320_204468869_204469887_204494355
transcript_178853.known	chr9	-	952	6	FSM	ENSG00000137074.20	ENST00000474658.7	952	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	149.081722555114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAGGTCTGACCATTG	28	True	NA	NA	False	NA	NA	NA	33001579	32973241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32989758_32989896_33001566
transcript_178856.known	chr9	-	1846	7	FSM	ENSG00000137074.20	ENST00000436040.7	1846	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	161.042437471204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTATTCAGTTGTTT	-1	True	NA	-12	True	AATAAA	-11	NA	33025118	32972618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33025022
transcript_178862.known	chr9	+	2319	9	FSM	ENSG00000086061.16	ENST00000330899.5	2319	9	0	0	0	0	multi-exon	FALSE	canonical	3	1987	junction_5	129.314297353386	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCACTACAGGCTTT	-1	True	NA	14	True	AATATA	-22	NA	33025272	33039907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33025384_33026474_33026617_33026812_33026991_33029884_33029990_33030439_33030668_33034215_33034331_33036573_33036690_33037014_33037116_33038684
transcript_17887.known	chr1	-	5259	2	FSM	ENSG00000158615.10	ENST00000367188.5	5259	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTTGGTTCAACTT	-3	True	NA	-15	True	AATAAA	-26	NA	204411817	204403380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204406314_204409491
transcript_178871.known	chr9	-	4176	6	FSM	ENSG00000086062.13	ENST00000379731.5	4176	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	10.9836241741968	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGTGGTTTCTGTTTG	9	True	NA	-5	True	AATAAA	-18	NA	33167336	33110641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33113587_33113773_33113879_33115990_33116114_33120418_33120607_33135188_33135425_33166757
transcript_178874.known	chr9	-	1396	8	FSM	ENSG00000107262.26	ENST00000379707.7	1396	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	259.341709813481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCTCCTATCTGTTT	-10	True	NA	-32	True	AATGAA	-23	NA	33264720	33255048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262104_33262247_33262701_33262831_33264223
transcript_178878.known	chr9	-	1128	7	FSM	ENSG00000107262.26	ENST00000379704.7	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	555	junction_6	40.6762283841011	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTCTCTGTGGTTGT	1115	False	NA	-9	True	AGTAAA	-18	NA	33264571	33255025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33264223
transcript_178884.known	chr9	-	658	3	FSM	ENSG00000107262.26	ENST00000635077.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTATTGGACACTCTCA	5	True	NA	NA	False	NA	NA	NA	33264705	33262217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33262247_33262701_33262831_33264205
transcript_178885.known	chr9	+	1901	8	FSM	ENSG00000086065.14	ENST00000223500.9	1901	8	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	59.6322060635023	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGAAGTCTCTGTA	11	True	NA	NA	False	AATAAA	-16	NA	33265048	33282070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33278112_33278226_33280808
transcript_178890.known	chr9	+	4599	24	FSM	ENSG00000086102.19	ENST00000379540.8	4599	24	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_20	61.5417543106263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGCTGCCTTTTGGTGTT	-14	True	NA	8	True	ATTAAA	-19	NA	33290515	33371157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33351559_33351791_33352645_33352720_33354085_33354188_33354850_33354893_33364009_33364109_33364707_33364775_33366628_33366775_33367514_33367620_33369905
transcript_178893.known	chr9	+	3609	21	FSM	ENSG00000086102.19	ENST00000379521.8	3609	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_20	58.9376789498874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAAAGCTC	-18	True	NA	NA	False	AAAAAG	-4	NA	33290511	33365283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33351559_33351791_33352645_33352720_33354085_33354188_33354850_33354893_33364009_33364109_33364707
transcript_178897.known	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	24.021841912911	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	15	True	NA	5	True	AATAAA	-15	NA	33290544	33348723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
transcript_17890.known	chr1	+	10050	11	FSM	ENSG00000198625.14	ENST00000367182.8	10050	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	4.1821047332653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTCATTATTTT	4	True	NA	21	True	ATTAAA	-18	NA	204516405	204558120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_178904.known	chr9	-	1825	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	3.13687742827162	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTGTGCAAATATC	1	True	NA	-13	True	AATAAA	-19	NA	33447593	33441159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
transcript_178905.known	chr9	-	4834	26	FSM	ENSG00000165271.17	ENST00000297990.9	4834	26	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_21	16.8380521438793	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCGTGTCCTTCCTAG	-18	True	NA	-1	True	NA	NA	NA	33473924	33461352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
transcript_178911.nic	chr9	+	2079	9	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-762	31786	-762	1669	5prime_fragment	FALSE	canonical	2	7	junction_3	2	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	NA	False	NA	NA	False	AAAAAG	-45	NA	33523488	33541227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
transcript_178913.nic	chr9	+	1998	8	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-762	32801	-762	654	5prime_fragment	FALSE	canonical	2	7	junction_3	1.88441513689613	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTTGTATTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	33523488	33540212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077
transcript_178916.known	chr9	+	4477	5	FSM	ENSG00000107341.5	ENST00000263228.4	4477	5	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_4	34.5940746371398	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGACCCTCTTCTTTT	-3	True	NA	35	True	AATAAA	-36	NA	33817159	33920399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33817935_33886880_33886968_33900173_33900272_33911963_33912099_33917017
transcript_17892.known	chr1	+	9926	10	FSM	ENSG00000198625.14	ENST00000454264.6	9926	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	10.7577132821863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	-23	True	NA	20	True	ATTAAA	-17	NA	204516378	204558119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204546796_204546878_204549112
transcript_178924.known	chr9	-	4362	30	FSM	ENSG00000137073.24	ENST00000684158.1	4362	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_29	84.2662955233979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	6	True	NA	-22	True	NA	NA	NA	34048879	33921707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34032798_34032909_34048824
transcript_178927.known	chr9	-	4275	29	FSM	ENSG00000137073.24	ENST00000379238.7	4275	29	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_17	41.3471490515837	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTCTCTGTGTGGTGTG	-2	True	NA	-7	True	AATAAA	-15	NA	34048887	33921692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_178928.known	chr9	-	4437	29	FSM	ENSG00000137073.24	ENST00000682239.1	4437	29	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_28	65.9962410030345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	NA	False	NA	-22	True	NA	NA	NA	34049388	33921707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34049148
transcript_178937.known	chr9	-	4079	27	FSM	ENSG00000137073.24	ENST00000379239.9	4079	27	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	82.0304911559716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAATCCCCACCTAATA	329	False	NA	-43	True	NA	NA	NA	34048868	33921728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933647_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_178950.nic	chr9	-	483	5	ISM	ENSG00000137073.24	ENST00000683084.1	4165	25	-28	67183	-8	5417	5prime_fragment	FALSE	canonical	3	251	junction_4	36.1317035302793	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAATAGAGAGAAGAAAAG	282	False	NA	-51	True	AAAAAG	-31	NA	34048915	33989063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_178954.known	chr9	-	3592	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	17.832554500127	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTGAGTGAGTATT	-9	True	NA	-6	True	AATAAA	-16	NA	34126698	34086386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
transcript_17896.known	chr1	-	469	3	FSM	ENSG00000170382.12	ENST00000496057.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCCTGCCAGATCCG	9	True	NA	NA	False	NA	NA	NA	204685366	204619899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204620219_204633143_204633247_204685319
transcript_178961.known	chr9	-	6295	13	FSM	ENSG00000186638.17	ENST00000402558.7	6295	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	5.58954877924467	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGACTAGGTGTTAT	-25	True	NA	NA	False	AATACA	-21	NA	34329268	34252379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34286616_34286705_34290173_34290390_34297016_34297115_34306251_34306442_34310723_34311372_34329105
transcript_17897.known	chr1	-	3468	2	FSM	ENSG00000170382.12	ENST00000367177.4	3468	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGAGTATTGAGTGTG	-17	True	NA	-7	True	AATAAA	-42	NA	204685738	204617169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204620219_204685319
transcript_178971.nnic	chr9	+	2840	8	NNC	ENSG00000165006.14	novel	2705	7	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	146.729933787853	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCTTGGTGTGATAAC	NA	False	NA	7	True	AATAAA	-11	NA	34179020	34252520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_34179241_34216673_34216790_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_178973.known	chr9	+	2705	7	FSM	ENSG00000165006.14	ENST00000297661.9	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	35.573476386519	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	-7	True	NA	10	True	AATAAA	-14	NA	34179042	34252523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34179241_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_178978.known	chr9	+	1753	6	FSM	ENSG00000165006.14	ENST00000626262.2	1753	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	124.59277667666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGAAGATTCGG	-5	True	NA	-64	True	NA	NA	NA	34179044	34251698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34179241_34220907_34220949_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_178983.known	chr9	+	2029	6	FSM	ENSG00000165006.14	ENST00000625521.2	2029	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	110.875425591066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGGCCTAGTTGCTG	NA	False	NA	88	True	NA	NA	NA	34179004	34251850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34179241_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_178987.known	chr9	+	998	5	FSM	ENSG00000164978.18	ENST00000379158.7	998	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.302814907189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCTTCTAACCTGTT	-2	True	NA	23	True	AATAAA	-16	NA	34329568	34343699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34329600_34336228_34336342_34338712_34338848_34339023_34339167_34343123
transcript_178988.known	chr9	+	960	4	FSM	ENSG00000164978.18	ENST00000346365.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.4697670227235	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	5	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34329600_34338712_34338848_34339023_34339167_34343123
transcript_178989.known	chr9	+	825	3	FSM	ENSG00000164978.18	ENST00000618590.1	825	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	5	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34329600_34339023_34339167_34343123
transcript_17899.nic	chr1	+	5409	26	NIC	ENSG00000163531.17	novel	10336	30	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	14.7037954283919	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTAGCAATGCTTGCAT	NA	False	NA	31	True	ATTAAA	-31	NA	204828605	205018371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670_204976796_204977680_204977726_204978967_204979070_204979361_204979560_204980369_204980441_204981797_204982021_204987417_204987541_204988632_204988807_205009556_205009689_205012796_205012867_205016307
transcript_178991.known	chr9	-	6447	2	FSM	ENSG00000164976.9	ENST00000297625.8	6447	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTTTTATTGATTAA	-2	True	NA	NA	False	AATAAA	-21	NA	34376898	34366665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34373007_34376792
transcript_178996.known	chr9	-	798	6	FSM	ENSG00000164970.15	ENST00000422409.5	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	30.7219791029159	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTGCTGCCAGGCCA	6	True	NA	NA	False	NA	NA	NA	34458552	34401012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458203
transcript_178997.known	chr9	-	3591	6	FSM	ENSG00000164970.15	ENST00000379080.5	3591	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	41.7736759215657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTCCCTCCCTGGG	6	True	NA	85	True	ATTAAA	-17	NA	34458552	34398183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458236
transcript_178998.known	chr9	-	3588	6	FSM	ENSG00000164970.15	ENST00000297620.8	3588	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	22.2207110597298	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCCTCAGCTCCCTC	-12	True	NA	79	True	ATTAAA	-11	NA	34458570	34398189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458203
transcript_178999.known	chr9	-	3543	6	FSM	ENSG00000164970.15	ENST00000379081.5	3543	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	34.9879979421515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTCCCTCCCTGGG	6	True	NA	85	True	ATTAAA	-17	NA	34458552	34398183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458236
transcript_179.known	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1144_1987
transcript_179001.known	chr9	+	2529	20	FSM	ENSG00000122735.16	ENST00000242317.9	2529	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1.26753627145182	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACACCTTTAATTGTGC	-8	True	NA	2	True	AATAAA	-17	NA	34458804	34520984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34459054_34483447_34483481_34485141_34485241_34485436_34485518_34489322_34489450_34490011_34490125_34490368_34490489_34491494_34491555_34493193_34493329_34497114_34497200_34500721_34500840_34501137_34501182_34506626_34506875_34512108_34512199_34512336_34512425_34513111_34513192_34514393_34514543_34514639_34514740_34517284_34517468_34520657
transcript_179002.known	chr9	-	1028	2	FSM	ENSG00000168913.7	ENST00000399775.3	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGAGGTTTTCTTCTCTT	-2	True	NA	-5	True	AATAAA	-17	NA	34522990	34521042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34521857_34522776
transcript_179003.known	chr9	-	2038	10	FSM	ENSG00000122756.15	ENST00000378980.8	2038	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	3.65148371670111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTGGAACAGACCCACT	-1	True	NA	NA	False	ATTAAA	-17	NA	34589724	34551432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34581094_34581206_34589554
transcript_179004.nnic	chr9	-	2057	10	NNC	ENSG00000122756.15	novel	1926	10	NA	NA	-279	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	3.79408246199197	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTTGGAACAGACCCAC	451	False	NA	NA	False	ATTAAA	-16	NA	34590419	34551433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34581094_34581206_34590229
transcript_179006.known	chr9	-	1910	9	FSM	ENSG00000122756.15	ENST00000351266.8	1910	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	4.59449398737228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGAACAGACCCACTT	0	True	NA	NA	False	ATTAAA	-18	NA	34589706	34551431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34589554
transcript_179010.known	chr9	-	1092	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCCTGCTATGTGGAG	0	True	NA	-1	True	AATAAA	-26	NA	34612104	34610485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34611333_34611859
transcript_179011.known	chr9	-	872	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTACTCAGCCTGC	7	True	NA	-10	True	AATAAA	-17	NA	34612097	34610494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34611333_34612063
transcript_179012.known	chr9	-	828	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	0	0	0	0	multi-exon	TRUE	canonical	3	309	junction_5	26.8788433944287	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGTGCTGGCTTCTTGG	-5	True	NA	-1	True	AATAAA	-18	NA	34620495	34613545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_179015.known	chr9	-	1672	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_2	162.243301522401	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-30	True	NA	-24	True	AATAAA	-20	NA	34637787	34634721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
transcript_179016.known	chr9	-	1612	4	FSM	ENSG00000147955.18	ENST00000679597.1	1612	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	453.81665411877	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-30	True	NA	-24	True	AATAAA	-20	NA	34637787	34634721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637606
transcript_179017.known	chr9	-	1582	4	FSM	ENSG00000147955.18	ENST00000353468.4	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	529.777521439162	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	13	True	NA	-24	True	AATAAA	-20	NA	34637744	34634721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637090_34637266_34637421_34637546
transcript_179019.known	chr9	-	630	4	FSM	ENSG00000147955.18	ENST00000680277.1	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	540.455980322789	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGGCGTCATCCCATCC	-27	True	NA	NA	False	NA	NA	NA	34637784	34635783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637113_34637219_34637421_34637546
transcript_179021.known	chr9	-	864	4	FSM	ENSG00000147955.18	ENST00000680244.1	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	509.964704661019	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTCCATAGCTCCAC	27	False	34637820	NA	False	NA	NA	NA	34637793	34635317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635641_34636996_34637090_34637219_34637421_34637546
transcript_179023.known	chr9	-	1842	3	FSM	ENSG00000147955.18	ENST00000497006.2	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	1036	junction_1	113.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGATCTGTTCCATCT	NA	False	NA	-41	True	AATAAA	-3	NA	34637844	34634738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637421_34637546
transcript_179024.known	chr9	-	840	3	FSM	ENSG00000147955.18	ENST00000477726.1	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	599.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAAACACAGAGACCCAT	11	False	NA	NA	False	NA	NA	NA	34637809	34635482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34637219_34637421_34637546
transcript_179027.known	chr9	-	1457	3	FSM	ENSG00000147955.18	ENST00000680730.1	1457	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACATATCA	11	False	NA	-121	True	NA	NA	NA	34637809	34634818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34637266_34637421_34637546
transcript_179029.known	chr9	-	2878	2	FSM	ENSG00000147955.18	ENST00000681409.1	2878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACACATATCACAGTTT	4	True	NA	-115	True	NA	NA	NA	34637816	34634812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34637421_34637546
transcript_179030.known	chr9	-	1743	3	FSM	ENSG00000147955.18	ENST00000378892.5	1743	3	0	0	0	0	multi-exon	TRUE	canonical	3	867	junction_2	84.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	25	True	NA	-24	True	AATAAA	-20	NA	34637732	34634721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637090_34637219
transcript_179036.known	chr9	+	1722	13	FSM	ENSG00000137070.19	ENST00000441545.7	1722	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	6.33059151176957	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATCCAATGCTGCTTT	-4	True	NA	29	True	AATAAA	-37	NA	34652184	34661902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34652234_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_179040.known	chr9	+	1728	13	FSM	ENSG00000137070.19	ENST00000318041.13	1728	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	8.86002257333467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGAAATTATTATCCA	14	False	NA	19	True	AATAAA	-27	NA	34653934	34661892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_179048.known	chr9	+	1756	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	18.5658288260988	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	1	True	NA	NA	False	GGGGCT	-7	NA	34646674	34651035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_179056.nic	chr9	+	1891	10	ISM	ENSG00000213930.12	ENST00000378842.8	1756	11	-68	737	18	16	5prime_fragment	FALSE	canonical	3	166	junction_5	18.6474769087329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCCATGCCACCATTC	-3	True	NA	NA	False	NA	NA	NA	34646606	34650298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409
transcript_179066.known	chr9	+	890	9	FSM	ENSG00000213930.12	ENST00000554085.5	890	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	63.3635344658109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGACCAAGTATGACAACC	3	True	NA	NA	False	NA	NA	NA	34646676	34649022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34647474_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997
transcript_179077.known	chr9	+	1164	9	FSM	ENSG00000213930.12	ENST00000554550.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	64.8401881551866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAATTTGGGCAGATA	-4	True	NA	-33	True	NA	NA	NA	34646635	34650529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_179085.known	chr9	+	838	8	FSM	ENSG00000213930.12	ENST00000473506.6	838	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	68.8111879844894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTCTCCCAAGTAGGAT	-2	True	NA	NA	False	NA	NA	NA	34646637	34648894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34647540_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761
transcript_179092.known	chr9	+	1712	8	FSM	ENSG00000213930.12	ENST00000554638.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	20.3389643145307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTAATAAAACTGTGC	7	True	NA	-13	True	NA	NA	NA	34646680	34650549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_179119.known	chr9	+	578	5	FSM	ENSG00000213930.12	ENST00000554897.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	101.981309562096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGATCTCAGCAGGCCTA	1	True	NA	NA	False	NA	NA	NA	34646674	34648375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648047_34648172_34648333
transcript_179121.known	chr9	+	689	4	FSM	ENSG00000213930.12	ENST00000555214.5	689	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.41179816636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGGTGAGAAGACATC	22	False	NA	NA	False	NA	NA	NA	34646695	34648637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34648047_34648172_34648333
transcript_179125.known	chr9	-	338	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	21.6384431561566	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCACCGTACTGACC	-2	True	NA	-19	True	ATTAAA	-10	NA	34666028	34665031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
transcript_179128.known	chr9	-	465	3	FSM	ENSG00000187186.15	ENST00000416454.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCGTACTGACCTCCT	-2	True	NA	-15	True	ATTAAA	-14	NA	34666028	34665027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34665374_34665612_34665681_34665977
transcript_179129.known	chr9	-	1521	3	FSM	ENSG00000187186.15	ENST00000421828.7	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTATGACAAGCCCGAG	-19	True	NA	NA	False	NA	NA	NA	34666045	34664162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34665191_34665313_34665374_34665612
transcript_17913.known	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	13.8740365030833	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	20	True	NA	5	True	ATTAAA	-14	NA	204828694	204977139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_179133.known	chr9	+	2422	6	FSM	ENSG00000137094.16	ENST00000684748.1	2422	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	92.5734303134544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAGTATTTTAAAAA	84	False	NA	-2	True	NA	NA	NA	34989803	34998406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34989832_34990498_34990612_34990759_34990813_34993199_34993445_34996264_34996867_34997025
transcript_179139.known	chr9	+	2589	5	FSM	ENSG00000137094.16	ENST00000453597.8	2589	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.7106584119437	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	2671	False	NA	23	True	AATAAA	-18	NA	34989640	34998431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34989832_34990667_34990813_34993199_34993445_34996264_34996867_34997025
transcript_17914.nnic	chr1	+	2629	16	NNC	ENSG00000163531.17	novel	2462	16	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	17.6856501781026	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	NA	False	NA	5	True	ATTAAA	-14	NA	204828605	204977139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_204828783_204920631_204920741_204944225_204944407_204951652_204951749_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_179142.nic	chr9	+	2489	5	NIC	ENSG00000137094.16	novel	2651	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	95.6896023609671	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGAGCAGGAGCAA	-14	True	NA	20	True	AATAAA	-15	NA	34989705	34998428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_34989832_34990498_34990612_34993199_34993445_34996264_34996867_34997025
transcript_179145.known	chr9	+	2391	4	FSM	ENSG00000137094.16	ENST00000312316.9	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	27.0678160675491	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	-26	True	NA	23	True	AATAAA	-18	NA	34989693	34998431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025
transcript_179146.known	chr9	+	852	4	FSM	ENSG00000137094.16	ENST00000469798.5	852	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.884639046287	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCCTGCAATGATGTC	29	True	NA	NA	False	NA	NA	NA	34989748	34997077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34989832_34993199_34993445_34996394_34996867_34997025
transcript_179148.known	chr9	+	3068	4	FSM	ENSG00000137094.16	ENST00000545841.5	3068	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	90.0703428808099	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTAGGTTCAAGCGAC	546	False	NA	NA	False	NA	NA	NA	34990265	34998900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34990612_34993199_34993445_34996264_34996867_34997025
transcript_179149.known	chr9	+	2818	4	FSM	ENSG00000137094.16	ENST00000454002.6	2818	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	83.4918492362511	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGCAGGAGCAACAAAC	530	False	NA	25	True	AATAAA	-20	NA	34990249	34998433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34990813_34993199_34993445_34996264_34996867_34997025
transcript_179152.nic	chr9	+	2362	4	NIC	ENSG00000137094.16	novel	5228	3	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	88.1904504782437	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGAGCAGGAGCAA	969	False	NA	20	True	AATAAA	-15	NA	34991304	34998428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_34991417_34993199_34993445_34996264_34996867_34997025
transcript_179155.known	chr9	+	683	3	FSM	ENSG00000137094.16	ENST00000539059.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	97.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGGCGTCGCCTCAACC	1007	False	NA	NA	False	NA	NA	NA	34991342	34996628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34991417_34993199_34993445_34996264
transcript_17916.nnic	chr1	+	2421	15	NIC	ENSG00000163531.17	novel	2462	16	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.1597221951241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	-48	True	NA	5	True	ATTAAA	-14	NA	204828626	204977139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_204828783_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_179163.known	chr9	-	3382	17	FSM	ENSG00000165280.18	ENST00000417448.2	3382	17	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_16	796.585829885895	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAAACGTTGGGTCAAA	7839	False	NA	-40	True	NA	NA	NA	35072205	35056587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35071756
transcript_179164.known	chr9	-	3849	17	FSM	ENSG00000165280.18	ENST00000448530.6	3849	17	0	0	0	0	multi-exon	FALSE	canonical	2	45	junction_16	793.089991347136	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTATTGAATTTTTTT	7376	False	NA	17	True	ATTAAA	-28	NA	35072668	35056063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072276
transcript_179179.nic	chr9	-	2474	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	73.3618721524627	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	NA	False	NA	-21	True	AGTAAA	-13	NA	35080055	35073838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
transcript_17918.nic	chr1	+	2509	15	NIC	ENSG00000163531.17	novel	4957	24	NA	NA	-150	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	16.5517124090974	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	NA	False	NA	5	True	ATTAAA	-14	NA	204929258	204977139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_204929503_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_179192.known	chr9	-	2556	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	43.7384642441624	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-11	True	NA	-21	True	AGTAAA	-13	NA	35079942	35073838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_179212.known	chr9	-	2108	13	FSM	ENSG00000221829.10	ENST00000425676.5	2108	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	90.2251427756636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTACTACATATACT	5	True	NA	-17	True	AGTAAA	-17	NA	35079693	35073834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078604_35078737_35079150_35079242_35079440
transcript_17923.known	chr1	+	7916	23	FSM	ENSG00000184144.12	ENST00000331830.7	7916	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	3.311637381834	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCAAGGTGGCCTGAT	-2	True	NA	NA	False	AGTAAA	-20	NA	205043211	205078289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205043395_205053099_205053256_205057920_205058066_205058180_205058357_205058567_205058664_205059083_205059294_205059582_205059683_205061244_205061421_205061864_205062002_205062439_205062570_205064321_205064473_205064622_205064751_205065086_205065263_205065788_205065910_205066440_205066600_205067100_205067251_205069490_205069562_205069826_205070062_205070425_205070539_205071946_205072134_205072482_205072596_205073067_205073237_205073655
transcript_17925.known	chr1	-	4367	14	FSM	ENSG00000117222.14	ENST00000264515.11	4367	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.9409217454284	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-3	True	NA	-21	True	AATAAA	-21	NA	205121978	205086141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_17927.known	chr1	-	4290	14	FSM	ENSG00000117222.14	ENST00000367164.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.6858238753803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-12	True	NA	-21	True	AATAAA	-21	NA	205122015	205086141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205088816_205094986_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_179274.known	chr9	-	3159	17	FSM	ENSG00000165280.18	ENST00000679862.1	3159	17	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_2	779.082430551318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCACAAGCAGTTTCTAA	0	True	NA	-86	True	NA	NA	NA	35072611	35056633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057223_35057375_35057528_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
transcript_179275.known	chr9	-	2588	13	FSM	ENSG00000165282.14	ENST00000298004.9	2588	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	47.2848196218053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	6963	False	NA	-46	True	AATAAA	-16	NA	35096220	35088687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
transcript_179276.nic	chr9	-	3119	12	ISM	ENSG00000165282.14	ENST00000298004.9	2588	13	-354	1	2	0	intron_retention	FALSE	canonical	3	31	junction_11	38.4939621754755	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	24	True	NA	-47	True	AATAAA	-15	NA	35096574	35088688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878
transcript_179277.nic	chr9	-	2837	12	NIC	ENSG00000165282.14	novel	2464	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	43.8249711828035	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	30	True	NA	-47	True	AATAAA	-15	NA	35096568	35088688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096154
transcript_179279.known	chr9	-	2464	12	FSM	ENSG00000165282.14	ENST00000361778.6	2464	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	32.8799469143566	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-3	True	NA	-47	True	AATAAA	-15	NA	35096601	35088688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_179281.nic	chr9	-	4185	12	NIC	ENSG00000165282.14	novel	2588	13	NA	NA	9	0	intron_retention	FALSE	canonical	2	9	junction_11	44.909642985197	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	31	True	NA	-47	True	AATAAA	-15	NA	35096567	35088688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
transcript_179285.known	chr9	-	4112	11	FSM	ENSG00000165282.14	ENST00000378617.4	4112	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	39.2923656707	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	7	True	NA	-46	True	AATAAA	-16	NA	35096591	35088687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096154
transcript_179287.nic	chr9	-	3733	11	NIC	ENSG00000165282.14	novel	2464	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	62	junction_10	23.1734762174344	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-21	True	NA	-47	True	AATAAA	-15	NA	35096619	35088688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_179306.nnic	chr9	-	1223	10	NNC	ENSG00000165283.16	novel	1365	10	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	26	junction_9	603.627184425766	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTCCTCTTTGATT	2	True	NA	-6	True	AATAAA	-18	NA	35103181	35099895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102791_35103090
transcript_179311.known	chr9	-	1365	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	1470	junction_9	189.520903436814	7701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTTTTGTCTTCAAG	1	True	NA	NA	False	NA	NA	NA	35103131	35099777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_179318.known	chr9	-	1293	9	FSM	ENSG00000165283.16	ENST00000619795.4	1293	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	629.755098728863	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	9193	False	NA	NA	False	NA	NA	NA	35103195	35099775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35103049
transcript_179326.known	chr9	-	1296	9	FSM	ENSG00000165283.16	ENST00000452248.6	1296	9	0	0	0	0	multi-exon	TRUE	canonical	2	84	junction_4	621.613814498198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	9193	False	NA	NA	False	NA	NA	NA	35103195	35099775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_179365.known	chr9	-	2566	10	FSM	ENSG00000005238.20	ENST00000378566.5	2566	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_7	20.2965666378319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTTGTTGTTGT	16	True	NA	0	True	AATAAA	-30	NA	35115850	35104111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35107569_35108127_35108350_35108593_35108738_35115670
transcript_179373.known	chr9	-	3070	9	FSM	ENSG00000005238.20	ENST00000378557.1	3070	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	18.8774832803528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTTTGGAAACTTGA	4487	False	NA	-30	True	ATTAAA	-14	NA	35111423	35104141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35111268
transcript_179375.nic	chr9	-	3268	9	NIC	ENSG00000005238.20	novel	3256	9	NA	NA	-140	0	intron_retention	FALSE	canonical	3	35	junction_8	11.6806463862237	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTACTTTTGTTGT	NA	False	NA	-9	True	AATAAA	-21	NA	35116002	35104120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115670
transcript_179376.known	chr9	-	2998	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	16.1690290370201	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	4	True	NA	-5	True	AATAAA	-25	NA	35115862	35104116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
transcript_179393.known	chr9	-	3016	9	FSM	ENSG00000005238.20	ENST00000605244.5	3016	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	21.9683721518004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTACTTTTGTTGT	NA	False	NA	-9	True	AATAAA	-21	NA	35116341	35104120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35116261
transcript_179398.known	chr9	+	6303	39	FSM	ENSG00000198722.15	ENST00000378495.7	6303	39	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_23	25.7616928780816	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTTTGGTAATTCTG	42	False	NA	21	True	AATAAA	-17	NA	35162061	35405338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992_35259051_35295695_35295931_35310466_35310782_35313898_35313990_35366946_35366994_35370317_35370397_35375126_35375202_35376027_35376248_35377467_35377696_35378294_35378437_35380469_35380640_35381099_35381216_35381555_35381720_35382356_35382508_35384245_35384315_35385723_35385814_35386164_35386294_35389845_35389974_35390628_35390715_35396475_35396603_35396840_35396938_35397166_35397311_35397634_35397713_35398210_35398289_35398553_35398643_35398881_35399035_35399160_35399285_35399391_35399449_35399648_35399730_35400295_35400444_35403166_35403260_35403439_35403600_35403747
transcript_17940.known	chr1	-	8010	13	FSM	ENSG00000133059.17	ENST00000367162.8	8010	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	5.45371942398539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTATCTGTTTGGT	11	True	NA	-9	True	AATAAA	-17	NA	205211702	205142504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205147746_205148204_205148340_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
transcript_179405.nic	chr9	+	1855	7	ISM	ENSG00000198722.15	ENST00000634487.1	5063	42	-135	143990	-23	16714	5prime_fragment	FALSE	canonical	3	181	junction_5	12.4632793972266	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGATGGCATGTGC	-6	True	NA	NA	False	NA	NA	NA	35161968	35260064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992
transcript_179408.known	chr9	+	5218	12	FSM	ENSG00000198853.12	ENST00000361226.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	9.18856637708602	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	-8	True	NA	18	True	AATAAA	-21	NA	35490110	35561895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35490173_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_179409.known	chr9	+	5636	12	FSM	ENSG00000198853.12	ENST00000455600.1	5636	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	13.2826861766028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTGTGTTCCCCC	-5	True	NA	21	True	AATAAA	-24	NA	35538631	35561898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35539109_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_179411.nnic	chr9	+	3534	11	NIC	ENSG00000198853.12	novel	5218	12	NA	NA	-422	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	14.7448296022708	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	13	False	NA	18	True	AATAAA	-21	NA	35489688	35561895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_35490173_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_179414.known	chr9	+	2530	10	FSM	ENSG00000107140.16	ENST00000336395.6	2530	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	5.2704627669473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCTCAGCCCGTGCGCCC	7	True	NA	55	True	AATAAA	-30	NA	35605261	35610033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35605839_35605983_35606106_35606236_35606286_35606836_35606984_35607326_35607410_35607581_35607673_35607927_35608012_35608159_35608250_35608394_35608510_35608861
transcript_179415.known	chr9	+	2226	9	FSM	ENSG00000107140.16	ENST00000498522.5	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	16.0837651064668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGTGCGCCCTCCTCCCC	180	False	NA	63	True	AATAAA	-38	NA	35605490	35610041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35605839_35605983_35606106_35606236_35606286_35606836_35606984_35607581_35607673_35607927_35608012_35608159_35608250_35608394_35608510_35608861
transcript_179418.nnic	chr9	-	1460	7	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1136	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	5.37742193496723	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGCACGTGTTAGTCTC	2327	False	NA	-30	True	TTTAAA	-1	NA	35617217	35609984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616279_35616599_35616690_35616913
transcript_179420.known	chr9	-	1222	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATTTTTACCTAGAAG	5	True	NA	-17	True	AATAAA	-16	NA	35650931	35649294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
transcript_179422.nic	chr9	-	3314	10	NIC	ENSG00000137135.18	novel	4498	12	NA	NA	-88	0	intron_retention	FALSE	canonical	3	56	junction_1	58.6287756424551	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTACTGTCTTTATTTT	NA	False	NA	0	True	NA	NA	NA	35665283	35658874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35659174_35660093_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_179431.known	chr9	-	3678	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	25.7023223658875	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACATCTACCTGGG	3	True	NA	-1	True	ATTAAA	-18	NA	35665195	35659342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_179432.nnic	chr9	-	1752	9	NNC	ENSG00000137135.18	novel	3678	9	NA	NA	-88	85	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	74.1795751875137	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTCTGTCTCAGTTTT	NA	False	NA	-4	True	AGTAAA	-25	NA	35665283	35661433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35662003_35662178_35662345_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_179437.known	chr9	-	2862	8	FSM	ENSG00000137135.18	ENST00000475323.5	2862	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	97.9852133784293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTACTGTCTTTATT	6	True	NA	-2	True	NA	NA	NA	35665192	35658876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35659174_35660093_35662003_35662178_35662268_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_179450.known	chr9	+	1264	5	FSM	ENSG00000159884.12	ENST00000426546.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	14.7054411698527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACATTTACAAAGCTG	-29	True	NA	NA	False	AATAAA	-28	NA	35658291	35661511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745
transcript_179451.known	chr9	+	899	5	FSM	ENSG00000159884.12	ENST00000378407.7	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	76.3053078101386	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	-17	True	NA	14	True	ACTAAA	-19	NA	35658303	35661186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660773
transcript_179469.known	chr9	-	1018	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_4	88.2662874488329	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	7469	False	NA	-22	True	AATAAA	-17	NA	35689913	35682013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_17947.known	chr1	-	7739	12	FSM	ENSG00000133059.17	ENST00000367161.7	7739	12	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	8.54932214218818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTATCTGTTTGGT	-12	True	NA	-9	True	AATAAA	-17	NA	205211566	205142504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205147746_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
transcript_179470.known	chr9	-	1182	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	284.793099240484	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTTGGCAATGGA	9911	False	NA	-1	True	AATAAA	-38	NA	35690056	35681992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_179471.known	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	257.060304208954	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	0	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_179472.known	chr9	-	8623	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_20	47.8185211961616	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGTAAGTGTCTGAG	179	False	35732211	NA	False	NA	NA	NA	35732195	35696947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_179474.nic	chr9	-	1389	11	ISM	ENSG00000137076.21	ENST00000314888.10	8623	57	-33	23868	-33	2288	5prime_fragment	FALSE	canonical	3	265	junction_5	35.6039323670855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGAGCACTGCCTGCC	7	True	NA	-4	True	NA	NA	NA	35732228	35720815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_179475.nic	chr9	-	1439	9	ISM	ENSG00000137076.21	ENST00000314888.10	8623	57	-336	25170	-336	986	5prime_fragment	FALSE	canonical	3	265	junction_3	37.8679861492528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTATGGGCCCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	35732531	35722117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_179478.nic	chr9	-	904	5	ISM	ENSG00000137076.21	ENST00000378192.2	1693	7	-374	1512	-283	-1512	5prime_fragment	FALSE	canonical	3	324	junction_1	19.9874960913067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATGGAGAAACTAAAGC	NA	False	NA	59	True	AAGAAA	-28	NA	35732478	35724615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_179479.nic	chr9	-	903	5	ISM	ENSG00000137076.21	ENST00000378192.2	1693	7	-427	1566	-336	-1566	5prime_fragment	FALSE	canonical	3	324	junction_1	19.9874960913067	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAATAACAGGGACCT	NA	False	NA	5	True	NA	NA	NA	35732531	35724669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_179484.known	chr9	-	3611	17	FSM	ENSG00000070610.14	ENST00000378103.7	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	235	junction_14	60.6096307838119	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-23	True	NA	-4	True	AATAAA	-16	NA	35749228	35736865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_179489.nnic	chr9	-	3579	17	NNC	ENSG00000070610.14	novel	3611	17	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_5	106.100114867987	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	7884	False	NA	-4	True	AATAAA	-16	NA	35749262	35736865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738817_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_179493.nnic	chr9	-	3426	16	NIC	ENSG00000070610.14	novel	3611	17	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_13	92.5517272784372	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	7884	False	NA	-4	True	AATAAA	-16	NA	35749262	35736865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35744296_35744413_35744614_35744707_35748345
transcript_179513.known	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	25.1044692236263	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	0	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_179514.known	chr9	-	836	3	FSM	ENSG00000070610.14	ENST00000489025.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCCAGGAGGTGGAG	18	True	NA	NA	False	NA	NA	NA	35748973	35744296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35744413_35744614_35744707_35748345
transcript_179519.known	chr9	+	7028	9	FSM	ENSG00000107185.10	ENST00000378078.5	7028	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	1.61535599791501	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAATGTCT	-27	True	NA	NA	False	AATGAA	-9	NA	35749286	35758585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35749409_35749736_35749872_35750242_35750380_35750657_35750742_35750839_35750990_35751265_35751413_35751626_35751755_35751955_35752146_35752650
transcript_179522.known	chr9	-	515	3	FSM	ENSG00000215183.5	ENST00000414286.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCTCACTGTCC	533	False	NA	0	True	AATAAA	-17	NA	35756613	35752991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35753281_35753659_35753769_35756496
transcript_179523.known	chr9	-	677	3	FSM	ENSG00000215183.5	ENST00000436428.3	677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGACTCTCACTGTCCAC	-7	True	NA	2	True	AATAAA	-19	NA	35754276	35752989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35753281_35753659_35753769_35753999
transcript_179526.known	chr9	+	4248	22	FSM	ENSG00000159899.16	ENST00000342694.7	4248	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9.3571125650788	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGGATAGGGGCAAT	-21	True	NA	18	True	AATAAA	-17	NA	35791590	35809731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35793076_35793897_35794104_35799617_35799732_35800021_35800158_35800388_35800484_35800708_35800842_35801069_35801155_35801642_35801764_35801925_35802001_35802205_35802284_35802502_35802608_35802731_35802804_35805510_35805671_35805829_35805986_35806064_35806234_35806391_35806539_35807022_35807147_35807329_35807399_35808508_35808684_35808754_35808854_35809155_35809248_35809379
transcript_179529.known	chr9	+	3731	13	FSM	ENSG00000137103.20	ENST00000377988.6	3731	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	17.3773479628573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCCTGAGTGCCAGAA	236	False	NA	NA	False	AAGAAA	-35	NA	35829497	35854846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816_35846996_35852826_35852974_35853140_35853258_35853504
transcript_179535.known	chr9	+	2150	11	FSM	ENSG00000137103.20	ENST00000439587.6	2150	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	23.3762700189744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCACACTCTGTCCA	-34	True	NA	19	True	AATAAA	-18	NA	35829227	35847235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35829392_35829876_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816
transcript_179543.known	chr9	-	569	5	FSM	ENSG00000137133.11	ENST00000472085.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	213.935738014947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	6	True	NA	-2	True	AATAAA	-16	NA	35814992	35812959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813520_35813643_35813785_35814898
transcript_179544.known	chr9	-	649	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	20.2113829314077	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	2	True	NA	-2	True	AATAAA	-16	NA	35815042	35812959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
transcript_179545.known	chr9	-	853	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	192.445446815455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	NA	False	NA	-2	True	AATAAA	-16	NA	35815354	35812959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
transcript_179547.nic	chr9	+	851	4	ISM	ENSG00000137103.20	ENST00000439587.6	2150	11	16676	0	16127	0	3prime_fragment	FALSE	canonical	3	55	junction_2	18.6607133363712	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCACACTCTGTCCA	NA	False	NA	19	True	AATAAA	-18	NA	35845903	35847235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_35846069_35846257_35846382_35846468_35846612_35846816
transcript_179548.known	chr9	-	734	4	FSM	ENSG00000137133.11	ENST00000461169.1	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	13.0724477007517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTCCCTTAATTATGC	3	True	NA	-16	True	AATAAA	-2	NA	35815021	35812973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813339_35813444_35813550_35813643_35813785_35814898
transcript_179550.known	chr9	+	4412	21	FSM	ENSG00000122707.12	ENST00000377966.4	4412	21	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	78.7114985246755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCTTCTAAGCAATGT	-24	True	NA	15	True	AATAAA	-20	NA	36036912	36124455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956_36110080_36112304_36112477_36116984_36117178_36118756_36118968_36120662_36120737_36121532_36121689_36122823
transcript_179554.nic	chr9	+	2125	15	ISM	ENSG00000122707.12	ENST00000377966.4	4412	21	-21	14246	-21	-14246	5prime_fragment	TRUE	canonical	3	62	junction_13	77.6596775051512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTCCTCCCTGGAT	15	False	NA	16	True	AATAAA	-24	NA	36036891	36110209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956
transcript_179561.known	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	68.1311923791152	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	3	True	NA	30	True	ATTAAA	-27	NA	36036939	36086195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
transcript_179565.nnic	chr9	+	1661	9	NNC	ENSG00000122707.12	novel	1717	9	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_8	70.2424373153438	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTTGTCAGAGTTCG	15	False	NA	17	True	ATTAAA	-14	NA	36036891	36086182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085265
transcript_179566.nic	chr9	+	1024	9	NIC	ENSG00000122707.12	novel	1128	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_8	61.5912686587961	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATATCTTGTCAGAGTTC	15	False	NA	16	True	ATTAAA	-13	NA	36036891	36086181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085901
transcript_179573.nic	chr9	+	2461	2	ISM	ENSG00000122707.12	ENST00000475774.5	1128	11	-32	31663	-21	-31663	5prime_fragment	FALSE	canonical	3	290	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATTAGTGGAGATTTTA	15	False	NA	NA	False	TTTAAA	-17	NA	36036891	36054518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_36037099_36052264
transcript_179579.known	chr9	+	1895	5	FSM	ENSG00000122694.16	ENST00000377960.9	1895	5	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_1	13.7727085208393	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	10	True	NA	18	True	AATAAA	-19	NA	36136732	36163906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36150871_36150950_36162361
transcript_179587.known	chr9	+	812	4	FSM	ENSG00000122694.16	ENST00000377959.5	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	113.620225116638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGCGTCGTAATCTA	19	True	NA	NA	False	NA	NA	NA	36136741	36162910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36162361
transcript_179593.known	chr9	+	1078	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	71.8692388995459	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	-18	True	NA	30	True	AATAAA	-19	NA	36190920	36212059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_179597.known	chr9	+	989	3	FSM	ENSG00000122705.17	ENST00000540080.5	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	807	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGCTTCTTTATTGA	NA	False	NA	32	True	AATAAA	-21	NA	36190855	36212061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36191274_36204067_36204180_36211602
transcript_179598.known	chr9	-	5263	12	FSM	ENSG00000159921.20	ENST00000642385.2	5263	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	4.28720949910967	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTATTTTGTTTTG	-2	True	NA	0	True	AATAAA	-19	NA	36258448	36214440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_36217601_36218182_36218300_36219837_36220021_36222776_36222999_36223372_36223503_36227247_36227459_36229020_36229109_36233919_36234133_36236831_36236985_36246030_36246483_36249191_36249398_36258320
transcript_179599.known	chr9	-	5254	12	FSM	ENSG00000137075.18	ENST00000357058.7	5254	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	63.3783079401412	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTGTTGTGTTTCA	334	False	NA	-9	True	AATAAA	-17	NA	36400923	36336403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36400553
transcript_179601.known	chr9	-	5104	11	FSM	ENSG00000137075.18	ENST00000350199.8	5104	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	43.7704238042082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTGTTGTGTTTCA	334	False	NA	-9	True	AATAAA	-17	NA	36400923	36336403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36400553
transcript_179610.nnic	chr9	+	2486	18	NNC	ENSG00000165304.8	novel	2452	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	132.527074990495	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	-37	True	NA	-52	True	AATAAA	-17	NA	36572857	36677682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_36573008_36580072_36580156_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_179611.known	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	82.5116957212482	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	0	True	NA	-52	True	AATAAA	-17	NA	36572894	36677682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_179617.known	chr9	+	2363	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	111.530527631452	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_179619.known	chr9	+	2342	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	109.831618284536	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_17962.nnic	chr1	+	3839	6	NNC	ENSG00000133069.17	novel	3968	5	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.2975408183723	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCTGGTGTTGGTTG	-25	True	NA	11	True	AATAAA	-22	NA	205227917	205273342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_205227998_205228153_205228772_205241504_205242045_205268949_205269885_205271119_205271256_205271812
transcript_179622.known	chr9	+	2400	17	FSM	ENSG00000165304.8	ENST00000543751.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	91.5686004793674	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_179630.known	chr9	+	2236	16	FSM	ENSG00000165304.8	ENST00000545008.5	2236	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	114.416471230714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	2	True	NA	-53	True	AATAAA	-16	NA	36572896	36677681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_179635.known	chr9	+	1966	16	FSM	ENSG00000165304.8	ENST00000626154.2	1966	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	133.067334667662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCATTGGAACTACCA	35	True	NA	NA	False	CATAAA	-25	NA	36572929	36677417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_179639.known	chr9	+	2125	15	FSM	ENSG00000165304.8	ENST00000536987.5	2125	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	133.975801196046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	0	True	NA	-53	True	AATAAA	-16	NA	36572894	36677681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_17964.known	chr1	-	3391	7	FSM	ENSG00000163545.11	ENST00000367157.6	3391	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	22.762664362699	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCCTGCTGTTCTCTT	5	True	NA	-6	True	ATTAAA	-20	NA	205321745	205302062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205304514_205305198_205305332_205306187_205306308_205308164_205308231_205308580_205308733_205311704_205311826_205321397
transcript_179650.nic	chr9	+	1734	4	ISM	ENSG00000165304.8	ENST00000489766.5	551	6	-38	16684	-3	-16684	5prime_fragment	FALSE	canonical	3	188	junction_2	35.5183833465933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGATGGCGCGTG	-36	True	NA	NA	False	AAAAAG	-11	NA	36572858	36590938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535
transcript_179652.known	chr9	+	4429	3	FSM	ENSG00000281649.3	ENST00000658888.2	4447	3	18	0	3	0	multi-exon	FALSE	canonical	2	4	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCCAAATTCAGATCAG	-3	True	NA	-41	True	NA	NA	NA	37079876	37090342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080537_37084198_37084293_37086667
transcript_179653.known	chr9	+	4520	2	FSM	ENSG00000281649.3	ENST00000625445.1	4520	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTACCCTCTTTCT	NA	False	NA	3	True	AATATA	-19	NA	37079856	37090507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080537_37086667
transcript_179654.known	chr9	+	311	2	FSM	ENSG00000281649.3	ENST00000625218.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAATCAGTGTTTGATCC	29	False	NA	NA	False	NA	NA	NA	37079934	37086874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080039_37086667
transcript_179656.known	chr9	+	636	2	FSM	ENSG00000281649.3	ENST00000631093.1	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAGAAGCAATTCAAGAC	2	True	NA	NA	False	NA	NA	NA	37079907	37087176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080035_37086667
transcript_179657.known	chr9	+	2835	1	FSM	ENSG00000281649.3	ENST00000628924.1	2835	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTTGG	4985	False	NA	NA	False	NA	NA	NA	37084989	37087824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37085000_37087800
transcript_17966.known	chr1	-	2970	6	FSM	ENSG00000162873.15	ENST00000367155.8	2970	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	7.49399759807808	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATAGTGTAATTCTTTC	-2	True	NA	1	True	NA	NA	NA	205356922	205336060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205337593_205338494_205338597_205339193_205339410_205339643_205339809_205343228_205343794_205356532
transcript_179665.known	chr9	+	2584	9	FSM	ENSG00000147905.18	ENST00000336755.10	2584	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	30.4689903836671	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	-18	True	NA	15	True	AATAAA	-16	NA	37120573	37358149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_179667.nnic	chr9	+	2735	9	NIC	ENSG00000147905.18	novel	2793	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	42.1893055169198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	-16	True	NA	15	True	AATAAA	-16	NA	37120575	37358149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_37120777_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_179669.known	chr9	+	2793	9	FSM	ENSG00000147905.18	ENST00000461038.5	2793	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.0482084342051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	44	False	NA	15	True	AATAAA	-16	NA	37120635	37358149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37120895_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_179671.nic	chr9	+	1313	8	ISM	ENSG00000147905.18	ENST00000336755.10	2584	9	-66	3347	-66	0	5prime_fragment	FALSE	canonical	3	58	junction_1	31.2037412722858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGACTAAAACAAAAAATAAA	14	True	NA	NA	False	NA	NA	NA	37120507	37354802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709
transcript_179676.nic	chr9	+	2272	8	NIC	ENSG00000147905.18	novel	2828	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	46.0766885147988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGACTAAAACAAAAAATAAA	6	True	NA	NA	False	NA	NA	NA	37120597	37354802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_37121673_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709
transcript_179680.known	chr9	+	2828	9	FSM	ENSG00000147905.18	ENST00000534928.5	2828	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.0482084342051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATGTGTTTATTATG	6	True	NA	12	True	AATAAA	-13	NA	37120597	37358146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37120895_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_179685.known	chr9	+	1704	9	FSM	ENSG00000137106.18	ENST00000607784.1	1704	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	188.964116964042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGCAACCAAAAACCAT	43	False	NA	NA	False	NA	NA	NA	37422745	37434879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37434045
transcript_179689.known	chr9	+	1250	9	FSM	ENSG00000137106.18	ENST00000318158.11	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	65.2369479283021	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCTTGGCCTGTAAAT	-7	True	NA	11	True	ATTAAA	-14	NA	37422695	37436990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_179694.known	chr9	+	1080	9	FSM	ENSG00000137106.18	ENST00000460882.5	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	141.939192526236	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGGATCCACAGGCAG	-7	True	NA	NA	False	NA	NA	NA	37422695	37436848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_179713.known	chr9	+	602	6	FSM	ENSG00000137106.18	ENST00000491488.5	602	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	226.629742090486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCGCAACACCATGTC	22	True	NA	NA	False	NA	NA	NA	37422724	37436692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422834_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_179715.known	chr9	+	1136	5	FSM	ENSG00000137106.18	ENST00000493368.5	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	174.449132987241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAACAGCCCTGCCTC	98	False	NA	NA	False	NA	NA	NA	37422665	37429158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_179722.known	chr9	+	952	3	FSM	ENSG00000137106.18	ENST00000487399.5	952	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTAAGTGAACGCAGAC	11	True	NA	NA	False	NA	NA	NA	37422713	37426650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422806_37424844_37424976_37425921
transcript_179725.known	chr9	-	4690	2	FSM	ENSG00000168795.5	ENST00000307750.5	4690	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	-21	True	NA	0	True	AATAAA	-27	NA	37465450	37438101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37442556_37465214
transcript_179728.known	chr9	+	1805	13	FSM	ENSG00000137054.16	ENST00000442009.6	1805	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.2092482098988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACAGAGTGAGACCTTG	-19	True	NA	NA	False	NA	NA	NA	37485947	37503553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492281_37492376_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_179730.known	chr9	+	1855	12	FSM	ENSG00000137054.16	ENST00000377798.9	1855	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	5.9153812672718	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTGGTATTAT	-19	True	NA	14	True	TATAAA	-23	NA	37485947	37503697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_179741.known	chr9	-	4702	11	FSM	ENSG00000147912.13	ENST00000432825.7	4702	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	8.84081444212014	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGAAGCCTTTCCTTA	-1	True	NA	0	True	AATAAA	-23	NA	37576380	37510891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37512722_37515903_37516086_37518124_37518439_37521568_37521839_37522824_37522978_37525101_37525173_37529123_37529261_37531908_37532059_37537109_37537944_37541183_37541775_37576210
transcript_17975.known	chr1	-	637	3	FSM	ENSG00000186007.10	ENST00000495594.2	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGCGTTTTTCTTTC	1142	False	NA	NA	False	ATTAAA	-38	NA	205455954	205381377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205381857_205420454_205420575_205455916
transcript_179755.known	chr9	-	808	2	FSM	ENSG00000175768.13	ENST00000377773.9	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-6	True	NA	86	True	AATAAA	-18	NA	37592597	37588412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37588933_37592309
transcript_179756.known	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4473	junction_1	0	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-6	True	NA	86	True	AATAAA	-18	NA	37592597	37588412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37588933_37592411
transcript_179757.known	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-13	True	NA	41	True	NA	NA	NA	37592604	37588457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37588933_37592290
transcript_179761.known	chr9	+	2293	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.3474060048428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTAAGTCTGTCTT	-6	True	NA	8	True	ATTAAA	-17	NA	37753804	37778972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_179762.known	chr9	+	1443	9	FSM	ENSG00000165275.10	ENST00000488673.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	18.7812240016459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCAGCTGCAGGAG	6	True	NA	-8	True	AATAAA	-5	NA	37753816	37778022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763866_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_179764.known	chr9	+	7906	7	FSM	ENSG00000122741.16	ENST00000377724.8	7906	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	17.3557547292598	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGAACCTTCACCATA	3	True	NA	11	True	AATAAA	-16	NA	37800796	37867664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37801406_37819287_37819402_37842088_37842287_37854779_37854983_37857240_37857352_37860047_37860194_37861139
transcript_179774.known	chr9	-	1813	4	FSM	ENSG00000107371.14	ENST00000327304.10	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_2	82.5927088522683	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTCGTGTGTTTCTAA	-3	True	NA	NA	False	GATAAA	-7	NA	37785064	37779713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37784720
transcript_179775.known	chr9	-	768	3	FSM	ENSG00000107371.14	ENST00000396521.3	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	251.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTCAGAAGATAAGGT	-3	True	NA	NA	False	NA	NA	NA	37785064	37780606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37780881_37783913_37784064_37784720
transcript_179776.known	chr9	-	2253	3	FSM	ENSG00000107371.14	ENST00000465860.6	2253	3	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_1	94.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGATACATTTCACAAC	316	False	NA	-99	True	AATATA	-19	NA	37784745	37780059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37782138_37783913_37784064_37784720
transcript_179777.known	chr9	-	1871	4	FSM	ENSG00000122696.14	ENST00000496760.5	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	4.92160768674447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGTAGCAAACTGAG	3	True	NA	-1	True	AATAAA	-18	NA	37904353	37879399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37880749_37881517_37881632_37899828_37899951_37904067
transcript_179778.known	chr9	-	1171	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTTGGCCTCTTTTTT	-13	True	NA	-20	True	AATAGA	-15	NA	37904127	37887603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37888593_37899828_37899951_37904067
transcript_179779.known	chr9	-	6035	6	FSM	ENSG00000107338.10	ENST00000377707.4	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	10.2449987798926	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGTCTTTTTTTTTTC	14	True	NA	-5	True	AATATA	-19	NA	38069227	37915897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37920005_37948634_37948755_37955882_37956055_37974621_37974838_38016010_38016132_38067928
transcript_179784.known	chr9	+	584	3	FSM	ENSG00000137124.8	ENST00000635162.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGAGTCTTACGCCTT	-27	True	NA	NA	False	NA	NA	NA	38392711	38396138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_38392808_38394476_38394566_38395739
transcript_179787.known	chr9	+	3028	2	FSM	ENSG00000137124.8	ENST00000377698.4	3028	2	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	-37	True	NA	22	True	AATAAA	-22	NA	38392701	38398661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_38392808_38395739
transcript_17979.known	chr1	+	2986	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	12.397132284883	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	-24	True	NA	22	True	AATATA	-20	NA	205504668	205532790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_179791.known	chr9	-	3566	5	FSM	ENSG00000137142.5	ENST00000377694.2	3566	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	31.2969647090577	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGGTGTCTTTGTT	-1	True	NA	-4	True	AATAAA	-15	NA	38424454	38406527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_38409218_38411390_38411550_38413236_38413354_38414093_38414204_38423964
transcript_179796.known	chr9	+	1993	2	FSM	ENSG00000204860.5	ENST00000665533.1	1993	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAAATATTATTAACT	NA	False	NA	NA	False	CATAAA	-22	NA	38620734	38623536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_38621023_38621831
transcript_17980.known	chr1	+	2143	16	FSM	ENSG00000117266.16	ENST00000506784.5	2143	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.4904881086917	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTAGTCCCCCTTTCTG	-1	True	NA	NA	False	NA	NA	NA	205504597	205531786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504797_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_179801.known	chr9	-	826	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	15	0	-13	multi-exon	FALSE	canonical	3	34	junction_1	4	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	0	True	NA	NA	False	AATAAA	-15	NA	39810062	39803495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_39803860_39809485_39809616_39809730
transcript_179805.known	chr9	-	1888	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874562	39816598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_39817730_39818820_39818925_39873909
transcript_179812.known	chr9	+	576	4	ISM	ENSG00000276291.6	ENST00000610803.5	1068	7	1	25475	0	-4360	5prime_fragment	FALSE	canonical	3	22	junction_1	20.3141986469235	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAACCAAAGGCAAAGAA	5	True	NA	NA	False	NA	NA	NA	40992260	41007547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439
transcript_179815.nic	chr9	+	708	2	ISM	ENSG00000276291.6	ENST00000690347.1	2139	9	5	42497	1	267	5prime_fragment	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	-6	True	NA	NA	False	AATAAA	-7	NA	40992249	40993434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_40992776_40993252
transcript_179817.known	chr9	+	1903	1	FSM	ENSG00000280077.1	ENST00000623489.1	1903	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATTAACTGCTTACTG	NA	False	NA	2	True	AATAAA	-29	NA	41012230	41014133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_41012200_41014100
transcript_179832.known	chr9	-	721	7	FSM	ENSG00000215126.11	ENST00000617933.1	721	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	521.094814362565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	41189436	41171919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_41171935_41172711_41172750_41174292_41174353_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_179833.nic	chr9	-	615	3	ISM	ENSG00000215126.11	ENST00000617933.1	721	7	61	11484	-11	-11484	5prime_fragment	FALSE	canonical	3	947	junction_1	237	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTCTTGCTGTCTTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	41189375	41183403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_41183661_41185992_41186080_41189104
transcript_179837.known	chr9	+	2344	4	FSM	ENSG00000231527.7	ENST00000659299.1	2344	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGAGGTGGGCAGATCA	2422	False	NA	NA	False	NA	NA	NA	61856622	61977892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_61856815_61917467_61917608_61975790_61975913_61976002
transcript_179838.known	chr9	+	2056	3	FSM	ENSG00000231527.7	ENST00000660875.1	2056	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTATGTCTTTTTATAAA	59	False	NA	NA	False	NA	NA	NA	61854175	61973904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_61854377_61917467_61917608_61972189
transcript_179839.known	chr9	+	2318	3	FSM	ENSG00000231527.7	ENST00000668789.1	2318	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTTTGTTTTCTTCTTC	2333	False	NA	NA	False	AATAAA	-2	NA	61856533	61974086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_61856815_61917467_61917608_61972189
transcript_179840.known	chr9	+	559	3	FSM	ENSG00000231527.7	ENST00000657353.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTTGTAAGTTT	2370	False	NA	NA	False	AAGAAA	-18	NA	61856570	61975965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_61856815_61917467_61917608_61975790
transcript_179842.known	chr9	+	1890	3	FSM	ENSG00000227449.8	ENST00000377614.7	1890	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTTTGTTATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	62376160	62435199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62376814_62432875_62432980_62434066
transcript_179843.known	chr9	+	667	3	FSM	ENSG00000170161.7	ENST00000671425.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62897370	62898904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62897735_62897877_62897980_62898703
transcript_179845.known	chr9	+	1567	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897371	62899777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62897735_62897849_62897980_62898703
transcript_179846.known	chr9	-	1610	5	FSM	ENSG00000234665.9	ENST00000445604.7	1610	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.3788038445484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCACATGTAGGATCAAT	NA	False	NA	NA	False	NA	NA	NA	62898095	62865596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_62865734_62866966_62867111_62867696_62868234_62869189_62869305_62897418
transcript_179847.known	chr9	-	1713	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTAACTGCTTTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	62898095	62867202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_62868234_62869189_62869305_62897528
transcript_179852.known	chr9	+	2541	2	FSM	ENSG00000170161.7	ENST00000305709.5	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGGGCCAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62897448	62900104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62897735_62897849
transcript_17986.known	chr1	+	3141	16	FSM	ENSG00000117266.16	ENST00000360066.6	3141	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	21.6267324289999	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGCAGTCTCGTACAGAA	0	True	NA	25	True	AATATA	-23	NA	205504598	205532793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504879_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_179862.known	chr9	+	1411	16	FSM	ENSG00000147996.17	ENST00000497250.5	1411	16	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_7	527.930652011543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	6	False	NA	-1	True	AATAAA	-16	NA	65675895	65733670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_179865.known	chr9	+	1662	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	521.770010519531	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	0	True	NA	NA	False	AATAAA	-16	NA	65675927	65734041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_17987.nic	chr1	+	3120	16	NIC	ENSG00000117266.16	novel	3141	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	33.8425110704799	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	14	True	NA	22	True	AATATA	-20	NA	205504706	205532790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_205504879_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_179871.known	chr9	+	894	4	FSM	ENSG00000147996.17	ENST00000377380.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	435.343797730279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTTACATTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	65675874	65682026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573
transcript_179873.known	chr9	+	1347	3	FSM	ENSG00000147996.17	ENST00000377384.5	1347	3	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_2	184	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTATTGTTTTCTCCC	NA	False	NA	NA	False	AATAAA	-42	NA	65675874	65682577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573
transcript_179903.known	chr9	+	1736	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_2	245	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	11	False	NA	NA	False	ATTAAA	-45	NA	68241955	68249031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_68242186_68245212_68245300_68247612
transcript_179904.known	chr9	+	3115	16	FSM	ENSG00000107242.20	ENST00000265382.8	3115	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.02988833592198	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGGTACATCGATTC	-1	True	NA	3	True	AATAAA	-16	NA	68705239	69009176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_68705763_68742500_68742658_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_68991139_68991258_69008446
transcript_179909.known	chr9	+	922	5	FSM	ENSG00000165060.15	ENST00000396366.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	197.010786506729	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTATGCCTATACCT	-10	True	NA	93	True	NA	NA	NA	69035761	69073022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065044_69072611
transcript_17991.nic	chr1	+	3305	15	NIC	ENSG00000117266.16	novel	2986	16	NA	NA	-61	0	intron_retention	FALSE	canonical	3	101	junction_1	12.7671453348037	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	NA	False	NA	22	True	AATATA	-20	NA	205504534	205532790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_205504797_205523146_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_179912.nic	chr9	+	1082	4	ISM	ENSG00000165060.15	ENST00000396366.6	922	5	-59	7467	-48	-7467	5prime_fragment	FALSE	canonical	3	481	junction_1	22.8958996814325	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCGTCTTATGTTAGCA	NA	False	NA	NA	False	NA	NA	NA	69035702	69065555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937
transcript_179913.known	chr9	+	2632	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	207.192342200832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	-21	True	NA	-38	True	AATAAA	-36	NA	69035750	69074850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
transcript_179916.nic	chr9	+	5059	24	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	-136	0	intron_retention	TRUE	canonical	0	0	junction_1	73.9396371595724	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	15	False	NA	7	True	AATAAA	-21	NA	69121127	69255201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_69121726_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
transcript_179919.known	chr9	+	4503	23	FSM	ENSG00000119139.21	ENST00000377245.9	4503	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	72.1711836681796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTGGATTTGTATG	16	True	NA	14	True	AATAAA	-28	NA	69174276	69255208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
transcript_179926.known	chr9	-	750	4	FSM	ENSG00000278910.5	ENST00000624238.3	764	4	7	7	-2	-3	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	3989	False	NA	NA	False	AATAAA	-17	NA	69307135	69296684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_69296868_69304935_69305078_69306147_69306291_69306853
transcript_179928.known	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.9462980933004	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	121	True	NA	NA	NA	69324566	69392558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
transcript_179932.known	chr9	-	1689	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTTGTGGGTACC	-4	True	NA	NA	False	ATTAAA	-17	NA	69759959	69757122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_69758705_69759852
transcript_179936.known	chr9	+	844	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	43.1249347825594	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	5	True	NA	16	True	AATAAA	-17	NA	69820816	69906227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_179937.known	chr9	+	697	5	FSM	ENSG00000204711.9	ENST00000529446.5	697	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	12.6688594593199	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	15	False	NA	-12	True	AATGAA	-28	NA	69820826	69906199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_179938.known	chr9	+	748	5	FSM	ENSG00000204711.9	ENST00000527647.5	748	5	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_4	44.4803327325684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	15	False	NA	-12	True	AATGAA	-28	NA	69820826	69906199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69905953
transcript_179940.known	chr9	+	550	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	43.058100283222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	119	False	NA	-17	True	NA	NA	NA	69820959	69858158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
transcript_179941.known	chr9	+	502	3	FSM	ENSG00000204711.9	ENST00000495399.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGATCCTGTATT	79	False	NA	4	True	AATAAA	-15	NA	69820919	69858179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69856554_69856674_69857908
transcript_179942.known	chr9	+	3351	14	FSM	ENSG00000165072.10	ENST00000377182.5	3351	14	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	9.00952815818543	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTAGCAATTAACTCAT	0	True	NA	10	True	AATAAA	-18	NA	70043847	70226972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_70044232_70044583_70044698_70108210_70108483_70109719_70109805_70112994_70113133_70126158_70126416_70131518_70131613_70140144_70140289_70143553_70143820_70168701_70168796_70170478_70170632_70218336_70218597_70225749_70225835_70225967
transcript_179949.known	chr9	+	5949	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	0	0	0	0	multi-exon	FALSE	canonical	2	90	junction_11	25.1933839970382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	10	True	NA	32	True	AATAAA	-18	NA	70258977	70354873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
transcript_179951.nic	chr9	+	2827	21	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-40	7239	-40	2960	5prime_fragment	FALSE	canonical	2	90	junction_11	25.2445538681118	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGAAATAGAACAG	-30	True	NA	NA	False	AATATA	-7	NA	70258937	70347634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612
transcript_179961.nic	chr9	+	1435	9	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	56685	-58	11404	5prime_fragment	FALSE	canonical	3	143	junction_3	15.8700779771241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGGAAACTCTAGAG	NA	False	NA	NA	False	NA	NA	NA	70258919	70298188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965
transcript_179963.nic	chr9	+	1198	8	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	68616	-58	-527	5prime_fragment	FALSE	canonical	3	143	junction_3	15.8268694288658	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGATAAACATGTAAGG	NA	False	NA	20	True	NA	NA	NA	70258919	70286257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199
transcript_179964.nic	chr9	+	1645	7	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-616	72343	-616	-4254	5prime_fragment	FALSE	canonical	3	143	junction_3	15.8919965880803	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAGAAATGGAAAACGAG	NA	False	NA	NA	False	NA	NA	NA	70258361	70282530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421
transcript_179966.nic	chr9	+	789	5	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-38	76276	-38	-8187	5prime_fragment	FALSE	canonical	3	143	junction_3	18.8878267675241	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAGGGAGAAAGAAAAAC	-28	True	NA	NA	False	NA	NA	NA	70258939	70278597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490
transcript_179967.nic	chr9	+	614	4	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-51	77482	-51	-9393	5prime_fragment	FALSE	canonical	3	143	junction_3	21.6024689946929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACAACCCAGAAAATAGT	-41	True	NA	NA	False	NA	NA	NA	70258926	70277391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309
transcript_179970.known	chr9	-	6152	24	FSM	ENSG00000135048.14	ENST00000377044.9	6152	24	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_22	24.2718535210217	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGTGTATGTGAATT	-1	True	NA	-2	True	AATAAA	-22	NA	71768513	71683365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
transcript_179976.nnic	chr9	-	3156	5	NNC	ENSG00000107362.14	novel	3065	4	NA	NA	-39	-215	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	122.237473795886	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGGTATGTAGTCTAAT	0	True	NA	-19	True	AATAAA	-23	NA	71911232	71865366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_71867007_71870082_71870263_71874613_71875084_71906383_71906651_71910633
transcript_179977.known	chr9	-	3065	4	FSM	ENSG00000107362.14	ENST00000333421.7	3065	4	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	8.28653526310404	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTTATTTGCCTTTT	2	True	NA	-6	True	AGTAAA	-20	NA	71911193	71865151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_71867007_71870082_71870263_71874613_71875084_71910633
transcript_179981.known	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	14.0079342596338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	2	True	NA	15	True	AATAAA	-16	NA	71911638	71973457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
transcript_179984.known	chr9	+	902	3	FSM	ENSG00000155621.15	ENST00000479413.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	51	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAAGTCAATTTA	28	False	NA	-18	True	NA	NA	NA	71911509	71973152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_71911837_71971504_71971619_71972691
transcript_179986.known	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	340.133797203395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	6719	False	NA	29	True	NA	NA	NA	72364626	72355832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
transcript_179987.known	chr9	-	5841	7	FSM	ENSG00000107372.13	ENST00000376962.10	5841	7	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	245.949181742896	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAAGACTCCATTTT	2	True	NA	-26	True	AATAAA	-32	NA	72365208	72351412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364695
transcript_179989.known	chr9	-	2686	6	FSM	ENSG00000107372.13	ENST00000376960.8	2686	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_5	176.884821282099	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTTGTTCATTGGGTT	6110	False	NA	-4	True	AATAAA	-20	NA	72365235	72354457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364695
transcript_179996.known	chr9	-	2096	13	FSM	ENSG00000165092.13	ENST00000297785.8	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.71825107171668	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTACTTTTGAATTT	1	True	NA	-2	True	AATAAA	-16	NA	72953053	72900670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72901281_72905957_72906033_72909601_72909760_72911957_72912123_72916919_72917105_72918719_72918823_72924018_72924133_72925483_72925613_72927115_72927178_72928891_72929022_72930878_72931020_72940147_72940253_72952934
transcript_179997.known	chr9	+	1401	13	FSM	ENSG00000135046.14	ENST00000257497.11	1401	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	6.42207564231032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTCATTGACTCTT	4	True	NA	16	True	AATAAA	-18	NA	73151864	73170393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328_73159424_73160262_73160377_73160802_73160894_73162781_73162862_73163475_73163533_73165115_73165210_73166096_73166193_73167496_73167556_73169031_73169155_73170050
transcript_179998.known	chr9	+	9581	10	FSM	ENSG00000198963.11	ENST00000376896.8	9581	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	4.33190859769287	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTAATGGTTTTCT	-3	True	NA	NA	False	ATTAAA	-18	NA	74497334	74693177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_74497984_74630281_74630368_74634630_74634773_74642413_74642816_74660616_74660739_74662473_74662607_74665487_74665596_74667790_74667902_74671788_74671902_74685462
transcript_18.known	ERCC-00051	+	258	1	FSM	ERCC-00051A	DQ516740	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00051_+_0_300
transcript_180.known	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1086	junction_3	5009.80165941394	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
transcript_180000.known	chr9	-	2351	2	FSM	ENSG00000135045.7	ENST00000376854.6	2351	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTGTTTATTGTCAA	0	True	NA	-18	True	AATAAA	-15	NA	74952912	74946582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_74948207_74952185
transcript_180003.known	chr9	-	4259	8	FSM	ENSG00000156017.13	ENST00000376834.8	4259	8	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	20.9274743739771	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGATTTTCAGTTTT	9	True	NA	NA	False	AATAAA	-26	NA	75028293	74980789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_74983869_74984906_74985011_74996446_74996561_74998597_74998777_74999729_74999871_75016267_75016432_75017252_75017449_75028011
transcript_180007.known	chr9	-	1012	2	FSM	ENSG00000156017.13	ENST00000376830.3	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCAGTACATAGAAACTG	-3	True	NA	NA	False	TATAAA	-11	NA	75028423	75016848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_75017449_75028011
transcript_180008.known	chr9	-	453	2	FSM	ENSG00000106733.21	ENST00000490321.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCCGTAAAATTT	776	False	NA	67	True	AATATA	-38	NA	75088135	75087543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_75087869_75088007
transcript_180009.known	chr9	+	1348	10	FSM	ENSG00000134996.12	ENST00000346234.7	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	19.5946578761649	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTTATTTTTT	-17	True	NA	99	True	AGTAAA	-18	NA	75088513	75147265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_180017.known	chr9	+	5756	21	FSM	ENSG00000099139.14	ENST00000376752.8	5756	21	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	6.94982014155762	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGTTCATACCCAC	28	False	NA	17	True	ATTAAA	-21	NA	75890704	76195889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76134108_76134213_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76179595_76179699_76181397_76181592_76184672_76184758_76188577_76188676_76189093_76189224_76189630_76189747_76193236
transcript_180020.nnic	chr9	+	3281	20	NIC	ENSG00000099139.14	novel	5756	21	NA	NA	-16	-1519	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	8.33541986805292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCACCTCTCTCTTTC	NA	False	NA	23	True	ATTAAA	-32	NA	75890627	76193441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76179595_76179699_76181397_76181592_76184672_76184758_76188577_76188676_76189093_76189224_76189630_76189747_76193236
transcript_180025.known	chr9	+	2845	14	FSM	ENSG00000099139.14	ENST00000376767.7	2845	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	4.57417499917493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTCTATATCTTCA	-7	True	NA	NA	False	GATAAA	-15	NA	75890669	76175562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76134108_76134213_76157044_76157163_76158982_76159172_76169703_76169841_76174985
transcript_180028.known	chr9	-	2596	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	12.675435561221	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-9	True	NA	-10	True	AATAAA	-17	NA	76394426	76385525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
transcript_180036.known	chr9	+	5566	4	FSM	ENSG00000187210.14	ENST00000376730.5	5566	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	87.4922218765125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTCTGCAGAAATTT	-16	True	NA	11	True	ATTAAA	-21	NA	76459181	76507416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_76459306_76460059_76460178_76500915_76501062_76502238
transcript_180040.known	chr9	+	461	3	FSM	ENSG00000187210.14	ENST00000480311.5	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	53.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTTTTAAGGATTCATCAA	24	True	NA	NA	False	NA	NA	NA	76459221	76502469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_76459306_76500915_76501062_76502238
transcript_180045.known	chr9	-	1264	6	FSM	ENSG00000106772.19	ENST00000492157.5	1264	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.00665927567458	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGCAAGTTGTCT	219	False	NA	NA	False	AAAAAG	-7	NA	76906087	76823247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
transcript_180048.nic	chr9	+	1269	13	ISM	ENSG00000197969.14	ENST00000645632.1	10086	69	-17	161728	-15	9661	5prime_fragment	FALSE	canonical	3	31	junction_4	4.18578945162479	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGCAATATAAAGAACT	-16	True	NA	NA	False	AAAACA	-11	NA	77177518	77221278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77212968_77213029_77213233_77213315_77214328_77214387_77219953_77220082_77220276_77220384_77221184
transcript_180050.nic	chr9	+	1277	8	NIC	ENSG00000197969.14	novel	10086	69	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	14.059639731791	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAATGCCCTCCAA	NA	False	NA	NA	False	TTTAAA	-23	NA	77177387	77211617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77211212
transcript_180052.nic	chr9	+	576	5	ISM	ENSG00000197969.14	ENST00000645632.1	10086	69	-35	176940	-33	-5551	5prime_fragment	FALSE	canonical	3	31	junction_4	5.53962995154008	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTGATCAAGGTAAAGA	-34	True	NA	NA	False	AATAGA	-17	NA	77177500	77206066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977
transcript_180054.known	chr9	-	2497	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.40947204913349	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	-5	True	NA	-2	True	AATATA	-15	NA	77648322	77423078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
transcript_180056.known	chr9	+	3159	17	FSM	ENSG00000148019.14	ENST00000647199.1	3159	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	83.6196513610886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGTAACTAAGCAAAATGA	-2	True	NA	-25	True	NA	NA	NA	78236079	78271648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78250245_78250264_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
transcript_180058.known	chr9	+	11233	17	FSM	ENSG00000148019.14	ENST00000643273.2	11233	17	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_15	55.928386129049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTGCAGGAGTGAGT	-7	True	NA	NA	False	AATAAA	-20	NA	78236074	78279690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441_78266704_78270840
transcript_180062.known	chr9	+	3093	17	FSM	ENSG00000148019.14	ENST00000643847.1	3093	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	96.4449324744437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTAACGTGTGGTTTTG	23	True	NA	3	True	AATGAA	-8	NA	78236104	78271676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78248290_78248356_78248761_78248874_78250245_78250264_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441_78266704_78270840
transcript_180064.known	chr9	+	2788	17	FSM	ENSG00000148019.14	ENST00000642654.1	2788	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	89.7008918573277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAAAATAACACTTCCA	19	True	NA	23	True	ATTAAA	-24	NA	78236100	78271245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236660_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78250245_78250264_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
transcript_180067.known	chr9	+	2678	16	FSM	ENSG00000148019.14	ENST00000643347.1	2678	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	82.8483487396634	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTACCTTTAAATTTT	-10	True	NA	-19	True	ACTAAA	-14	NA	78236071	78267025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78250245_78250264_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
transcript_180068.known	chr9	+	2626	16	FSM	ENSG00000148019.14	ENST00000376597.9	2626	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	66.7291040950898	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGTCTTAAAATATAG	125	False	NA	31	True	AATAAA	-25	NA	78236206	78267075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
transcript_180069.known	chr9	+	11198	16	FSM	ENSG00000148019.14	ENST00000424347.6	11198	16	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_15	46.7663696830675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTGCAGGAGTGAGT	-20	True	NA	NA	False	AATAAA	-20	NA	78236061	78279690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
transcript_180076.known	chr9	+	2003	16	FSM	ENSG00000148019.14	ENST00000647130.1	2003	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	65.3818187436096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAGGAGTCTTTTGAAGG	290	False	NA	NA	False	NA	NA	NA	78236371	78266564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236660_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
transcript_180078.known	chr9	+	2371	15	FSM	ENSG00000148019.14	ENST00000642669.1	2371	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	59.7750886614967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAAAGTGATACTCTT	188	False	NA	NA	False	AATAAA	-23	NA	78236269	78266931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
transcript_180081.nic	chr9	+	2036	14	ISM	ENSG00000148019.14	ENST00000645398.1	2684	16	-20	1518	-17	75	5prime_fragment	FALSE	canonical	3	168	junction_8	25.9886183554199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCGCTTGAAGATGAAA	-37	True	NA	NA	False	AAGAAA	-2	NA	78236044	78265476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371
transcript_180095.known	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1479	junction_7	107.242715370322	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	-2	True	NA	15	True	ATTAAA	-17	NA	78297124	78330093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
transcript_180104.known	chr9	+	1411	8	FSM	ENSG00000135069.14	ENST00000347159.6	1411	8	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_7	572.671149000855	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGCCCTCTAGGTGCTG	16	False	NA	NA	False	NA	NA	NA	78297142	78329454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328980
transcript_180117.known	chr9	+	4886	20	FSM	ENSG00000106829.20	ENST00000376552.8	4886	20	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_16	29.4601472672543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTGGGTTTTTTTCAC	-6	True	NA	NA	False	AGTAAA	-22	NA	79571964	79726882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
transcript_180121.known	chr9	+	2382	19	FSM	ENSG00000106829.20	ENST00000265284.10	2382	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	39.3912003709796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGATTTCAGATACTCA	-17	True	NA	NA	False	NA	NA	NA	79572744	79725233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
transcript_18014.known	chr1	+	1134	7	FSM	ENSG00000117266.16	ENST00000512922.5	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	11.146748404804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCCTCGGGGGCAG	-3	True	NA	NA	False	NA	NA	NA	205504595	205526835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504797_205523146_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774
transcript_180141.nic	chr9	-	4230	20	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_14	130.738473589278	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	9	True	NA	79	True	AGTAAA	-18	NA	81689612	81583682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_180143.known	chr9	-	4135	20	FSM	ENSG00000196781.16	ENST00000376499.8	4135	20	0	0	0	0	multi-exon	TRUE	canonical	3	382	junction_8	95.8684463354345	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-2	True	NA	79	True	AGTAAA	-18	NA	81689547	81583682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_180165.nnic	chr9	-	3978	18	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_12	156.151598772821	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	9	True	NA	79	True	AGTAAA	-18	NA	81689612	81583682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_180185.nic	chr9	-	2631	7	ISM	ENSG00000196781.16	ENST00000376499.8	4135	20	-119	49786	-119	0	5prime_fragment	FALSE	canonical	3	402	junction_1	107.611957204269	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	NA	False	NA	-2	True	AATAAA	-18	NA	81689666	81633468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_180186.nic	chr9	-	2659	7	ISM	ENSG00000196781.16	ENST00000418319.5	936	9	-1218	13017	-119	-2	5prime_fragment	FALSE	canonical	3	131	junction_1	201.419476604313	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGGCTTGTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	81689666	81633470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_180195.known	chr9	-	5585	17	FSM	ENSG00000165105.10	ENST00000376447.4	5585	17	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_8	4.06922520266451	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGTTTCCTTCAG	0	True	NA	-6	True	AATAAA	-17	NA	83063142	82979589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_82982783_82990390_82990468_82992905_82993026_82997011_82997127_82998364_82998447_83000168_83000317_83000432_83000571_83000895_83001131_83004497_83004587_83005415_83005501_83007436_83007506_83009640_83009757_83012433_83012512_83015804_83015901_83022335_83022427_83025774_83025922_83062436
transcript_180198.known	chr9	-	5260	14	FSM	ENSG00000172159.16	ENST00000304195.8	5260	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.96718643885299	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCAATCATTCAGTT	-36	True	NA	NA	False	AATAAA	-18	NA	83538401	83244621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83248517_83290602_83290728_83298747_83298817_83299111_83299187_83309535_83309625_83310484_83310549_83311886_83311976_83313659_83313748_83335515_83335640_83343189_83343288_83349678_83349758_83372912_83372956_83389603_83389709_83538084
transcript_180199.known	chr9	+	936	5	FSM	ENSG00000148057.16	ENST00000376419.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.1650635094611	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATTCCCTGGAAATT	10	True	NA	1	True	AATAAA	-16	NA	83623142	83644123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_83623222_83628180_83628212_83628872_83628960_83641547_83641592_83643428
transcript_180200.known	chr9	-	3868	11	FSM	ENSG00000135018.14	ENST00000376395.9	3868	11	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_4	270.92980640749	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTTGTCTTGCCTCTT	-5	True	NA	-6	True	AATAAA	-16	NA	83707958	83659967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83666434_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_180206.known	chr9	-	2299	10	FSM	ENSG00000135018.14	ENST00000257468.11	2299	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	304.866455280924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCATTTGCACTCTAT	19	True	NA	-20	True	AATAAA	-15	NA	83707934	83661428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_180230.nnic	chr9	-	560	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-78	-20838	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	11	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTGTGTTACTTAA	NA	False	NA	-1	True	AATAAA	-15	NA	83921543	83919533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_83919814_83920105_83920213_83921370
transcript_180239.known	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	TRUE	canonical	3	5885	junction_16	1019.9985294107	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	7	True	NA	-6	True	AATATA	-14	NA	83980604	83968082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_18025.nnic	chr1	-	3587	5	NNC	ENSG00000158715.6	novel	3391	5	NA	NA	8248	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	14.8660687473185	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	8360	False	NA	-5	True	ATTAAA	-19	NA	205672261	205657850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_205659672_205661860_205662127_205662832_205663619_205664484_205664887_205671949
transcript_180251.nic	chr9	-	2123	17	NIC	ENSG00000165119.21	novel	2038	17	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	5714	junction_1	1162.56171207166	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	NA	False	NA	-12	True	AATAAA	-14	NA	83980685	83968908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_18026.known	chr1	-	3391	5	FSM	ENSG00000158715.6	ENST00000367145.4	3391	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	8.87059749960509	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	1	True	NA	-5	True	ATTAAA	-19	NA	205680509	205657850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205659672_205661860_205662127_205662832_205663619_205664484_205664887_205680393
transcript_180281.nic	chr9	-	1996	16	NIC	ENSG00000165119.21	novel	2038	17	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	1293	junction_9	2143.69602322717	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-19	True	NA	-12	True	AATAAA	-14	NA	83980630	83968908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_180289.nic	chr9	-	2054	16	NIC	ENSG00000165119.21	novel	2928	17	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	1293	junction_9	2078.78207505153	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGGTGGTCATTTTT	-19	True	NA	-14	True	AATAAA	-12	NA	83980630	83968910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_180307.known	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3360	junction_16	1493.64121858087	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-3	True	NA	-6	True	AATATA	-14	NA	83980215	83968082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_180308.known	chr9	-	2652	16	FSM	ENSG00000165119.21	ENST00000351839.7	2652	16	0	0	0	0	multi-exon	FALSE	canonical	3	5714	junction_1	995.764148782231	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	2159	False	NA	-25	True	AATAAA	-1	NA	83978452	83968196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372
transcript_180309.known	chr9	-	2038	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	0	0	0	multi-exon	FALSE	canonical	3	3360	junction_16	1587.19707616721	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	361	False	NA	-12	True	AATAAA	-14	NA	83980250	83968908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_180313.known	chr9	+	3300	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	46.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	3	True	NA	89	True	ATTAAA	-21	NA	83980804	84004074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_83980892_83999708_83999798_84000950
transcript_180314.known	chr9	+	3420	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	122.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	-4	True	NA	89	True	ATTAAA	-21	NA	83980797	84004074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_83981005_83999708_83999798_84000950
transcript_180315.known	chr9	-	4208	26	FSM	ENSG00000135049.16	ENST00000376083.7	4208	26	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_16	43.9426171273401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTCATCTTCTTT	113	False	NA	-3	True	AATAAA	-20	NA	85741818	85546538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655201_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
transcript_180316.known	chr9	-	4464	26	FSM	ENSG00000135049.16	ENST00000357081.8	4464	26	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_16	29.2173646997808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTCATCTTCTTT	-23	True	NA	-3	True	AATAAA	-20	NA	85741954	85546538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
transcript_180319.known	chr9	+	5813	23	FSM	ENSG00000135040.16	ENST00000361671.10	5813	23	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35.1589366512453	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATCATAAAATGCAAG	-8	True	NA	NA	False	NA	NA	NA	85941145	86025462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_180320.nic	chr9	+	3351	23	NIC	ENSG00000135040.16	novel	5813	23	NA	NA	-101	-3164	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	57.6935477722202	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTGCTGGAGATGAAAA	NA	False	NA	17	True	AATAAA	-20	NA	85941044	86022298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_85941875_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_180327.nic	chr9	+	1951	18	ISM	ENSG00000135040.16	ENST00000361671.10	5813	23	-114	8788	-114	-8788	5prime_fragment	TRUE	canonical	3	210	junction_1	36.333042336115	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGATTATTTTTA	NA	False	NA	NA	False	AGTAAA	-22	NA	85941031	86016674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_180328.nic	chr9	+	2539	18	NIC	ENSG00000135040.16	novel	5813	23	NA	NA	-101	-8788	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	63.0423595715295	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGATTATTTTTA	NA	False	NA	NA	False	AGTAAA	-22	NA	85941044	86016674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_85941875_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_18033.known	chr1	-	6399	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	22.4623141184419	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	14	True	NA	-3	True	AATAAA	-21	NA	205750182	205712821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_180343.known	chr9	-	3046	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_3	95.3272466329395	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-10	True	NA	52	True	AATAAA	-18	NA	86099558	86026145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
transcript_180344.known	chr9	-	3022	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	393.445401486175	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTCACAGCTCT	-7	True	NA	51	True	AATAAA	-17	NA	86100149	86026146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
transcript_180351.nic	chr9	-	961	7	ISM	ENSG00000135052.16	ENST00000388712.7	3046	10	-36	10203	-36	-761	5prime_fragment	FALSE	canonical	3	1185	junction_6	70.4264786063373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGCAGAGCCCAGCAGT	607	False	NA	NA	False	NA	NA	NA	86099594	86036348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
transcript_180352.known	chr9	-	813	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	175.307349151901	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGACAGGACATCGTG	438	False	NA	81	True	NA	NA	NA	86282108	86265678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
transcript_180353.known	chr9	-	1967	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_3	20.5318181259127	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	8	True	NA	NA	False	ATTAAA	-30	NA	86282538	86264545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
transcript_180357.known	chr9	-	5603	27	FSM	ENSG00000083223.18	ENST00000375963.8	5603	27	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	10.4861842045425	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-6	True	NA	-8	True	AATAAA	-21	NA	86354410	86287732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_180366.known	chr9	-	3145	1	FSM	ENSG00000180447.7	ENST00000298743.9	3145	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTAGTTACTTTCCA	1	True	NA	NA	False	ATTAAA	-35	NA	86947506	86944361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86944400_86947500
transcript_180367.known	chr9	-	2245	2	FSM	ENSG00000269994.3	ENST00000669870.1	2245	2	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTACTTTTTATCCA	NA	False	NA	-34	True	AATAGA	-5	NA	87042419	87008514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87010211_87041870
transcript_180370.known	chr9	+	5912	26	FSM	ENSG00000196730.13	ENST00000408954.8	5912	26	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_10	34.8033101873945	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTGATCTTTAATTC	-6	True	NA	19	True	AATAAA	-19	NA	87497866	87708634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_180371.nnic	chr9	+	4377	26	NNC	ENSG00000196730.13	novel	5912	26	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_25	91.4694615705154	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTAGTTTTTTTGATCTT	5	True	NA	13	True	AATAAA	-13	NA	87497690	87708628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87707836
transcript_180373.known	chr9	+	5759	26	FSM	ENSG00000196730.13	ENST00000472284.5	5759	26	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	85.9873106917527	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTTTTTTGATCTTTA	-5	True	NA	15	True	AATAAA	-15	NA	87497680	87708630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87497773_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_180375.known	chr9	+	5772	26	FSM	ENSG00000196730.13	ENST00000622514.4	5772	26	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	90.6825319452429	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTGATCTTTAATT	27	False	NA	18	True	AATAAA	-18	NA	87498534	87708633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498637_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_180376.known	chr9	+	5899	25	FSM	ENSG00000196730.13	ENST00000469640.6	5899	25	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_21	91.3320312407184	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTGATCTTTAATT	-5	True	NA	18	True	AATAAA	-18	NA	87497680	87708633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_180378.nnic	chr9	+	5992	25	NIC	ENSG00000196730.13	novel	5912	26	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	91.2967916559321	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTTTGATCTTTAA	5	True	NA	16	True	AATAAA	-16	NA	87497690	87708631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_18038.nic	chr1	-	774	6	ISM	ENSG00000069275.13	ENST00000367142.5	6399	7	-101	6773	-101	-1143	5prime_fragment	FALSE	canonical	3	35	junction_5	15.7047763435205	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGTTAAGAAGTCCAAAC	NA	False	NA	20	True	AAAAAG	-12	NA	205750283	205719594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_180388.known	chr9	+	2499	16	FSM	ENSG00000196730.13	ENST00000469067.5	2499	16	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_10	31.8200495844296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAATAAACCACTC	11	True	NA	NA	False	AATAGA	-34	NA	87497735	87650511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920
transcript_180391.known	chr9	+	626	3	FSM	ENSG00000196730.13	ENST00000495182.5	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	233.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGTGTTTTATCT	-2	True	NA	NA	False	AATAAA	-14	NA	87497834	87507002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969_87499140_87506819
transcript_180392.known	chr9	+	579	2	FSM	ENSG00000196730.13	ENST00000470267.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGCACAGTATATTGAT	1	True	NA	NA	False	NA	NA	NA	87497911	87499352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969
transcript_180394.known	chr9	+	1813	8	FSM	ENSG00000135047.16	ENST00000676531.1	1813	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	104.250874806685	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	3113	False	NA	22	True	AATAAA	-18	NA	87725734	87731393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726250_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_180395.known	chr9	+	2129	8	FSM	ENSG00000135047.16	ENST00000679149.1	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	82.1787499222002	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	2929	False	NA	10	True	AATAAA	-24	NA	87725550	87731466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726309_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_180396.known	chr9	+	1654	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	80.8326565649487	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	0	True	NA	13	True	AATAAA	-27	NA	87726118	87731469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_180397.known	chr9	+	1315	7	FSM	ENSG00000135047.16	ENST00000342020.6	1315	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	118.741198504235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	0	True	NA	22	True	AATAAA	-18	NA	87726118	87731393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726254_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87731007
transcript_180398.known	chr9	+	1373	7	FSM	ENSG00000135047.16	ENST00000677864.1	1373	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	115.336343891343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	0	True	NA	13	True	AATAAA	-27	NA	87726118	87731469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726254_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_180400.known	chr9	+	1536	9	FSM	ENSG00000135047.16	ENST00000340342.11	1536	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.568523436946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTGGGGCTTCTTTCT	3	True	NA	20	True	AATAAA	-16	NA	87726121	87731391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726254_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_180413.known	chr9	-	2149	8	FSM	ENSG00000156345.18	ENST00000325303.9	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	18.0611207191761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	10	True	NA	NA	False	AATAAA	-29	NA	87974533	87966440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970631_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_180414.known	chr9	-	1860	7	FSM	ENSG00000156345.18	ENST00000605159.5	1860	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	24.7431247465275	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	187	False	NA	0	True	AATAAA	-17	NA	87974505	87966610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967632_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_180415.known	chr9	-	3540	5	FSM	ENSG00000156345.18	ENST00000459720.5	3540	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	2.91547594742265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	7	True	NA	NA	False	AATAAA	-29	NA	87974685	87966440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967660_87969193_87970898_87971146_87971336_87973921_87974036_87974371
transcript_180419.known	chr9	+	2082	9	FSM	ENSG00000106723.17	ENST00000469017.6	2082	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	367.472107785067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAATCAGAAG	17	True	NA	NA	False	AGTAAA	-40	NA	88388430	88475914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88388539_88415606_88415700_88416643_88416767_88418777_88418952_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_18042.nic	chr1	-	464	4	ISM	ENSG00000069275.13	ENST00000367142.5	6399	7	-26	11104	-26	-5474	5prime_fragment	FALSE	canonical	3	35	junction_3	8.5764535535124	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAAACTATTTTAAATG	-12	True	NA	17	True	NA	NA	NA	205750208	205723925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_205723982_205727699_205727806_205729571_205729622_205749956
transcript_180425.known	chr9	+	4459	6	FSM	ENSG00000106723.17	ENST00000375859.4	4459	6	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_4	104.09149821191	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	30	True	NA	28	True	AATAAA	-15	NA	88388443	88478694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_180427.known	chr9	+	706	5	FSM	ENSG00000106723.17	ENST00000485565.6	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	309.493134011079	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCGTCTATTTCATC	38	True	NA	NA	False	NA	NA	NA	88388451	88475203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88468371_88468606_88475077
transcript_180428.known	chr9	+	814	5	FSM	ENSG00000106723.17	ENST00000485804.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	290.831996176487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTACGATTTGGTG	16	True	NA	NA	False	NA	NA	NA	88388429	88475245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88388539_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_18043.known	chr1	-	1723	6	FSM	ENSG00000117280.13	ENST00000235932.8	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	34.8114923552553	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	19	True	NA	NA	False	NA	NA	NA	205775449	205769436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775373
transcript_180431.known	chr9	+	1234	2	FSM	ENSG00000130045.17	ENST00000375854.8	1154	2	-73	-7	0	7	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGCCTTCTTTCTCA	NA	False	NA	NA	False	AATAAA	-30	NA	88535104	88544980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88535737_88544378
transcript_180432.known	chr9	+	4330	2	FSM	ENSG00000213694.6	ENST00000358157.3	4330	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTTTCCCCTTTCTTCT	6	True	NA	NA	False	ATTAAA	-20	NA	88991467	89005155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88991696_89001053
transcript_180437.known	chr9	+	616	3	FSM	ENSG00000123975.5	ENST00000314355.7	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	4605	junction_1	92	954	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCAAGTTTTTGA	-2	True	NA	26	True	AATAAA	-19	NA	89311194	89316703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89311352_89315169_89315298_89316372
transcript_180439.known	chr9	+	3481	17	FSM	ENSG00000187742.15	ENST00000375807.8	3481	17	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	59.2338783446602	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTCTCAGTGGTC	-18	True	NA	37	True	AATAAA	-36	NA	89318499	89359663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_180441.known	chr9	+	3320	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	76.7242424205023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	1	True	NA	16	True	AATAAA	-15	NA	89318518	89359642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_180446.nic	chr9	+	1246	8	ISM	ENSG00000187742.15	ENST00000375807.8	3481	17	-27	21153	-27	0	5prime_fragment	FALSE	canonical	3	146	junction_6	59.8515169534796	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	-1	True	NA	NA	False	AAGAAA	-4	NA	89318472	89338510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_180448.nic	chr9	+	1132	8	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_6	71.3971359398132	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	-1	True	NA	NA	False	AAGAAA	-4	NA	89318472	89338510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_180449.nic	chr9	+	1125	8	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-46	21132	-27	0	5prime_fragment	FALSE	canonical	3	89	junction_2	86.765459129536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	-1	True	NA	NA	False	AAGAAA	-4	NA	89318472	89338510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_180451.nic	chr9	+	1011	8	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_2	94.0234447532386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	-1	True	NA	NA	False	AAGAAA	-4	NA	89318472	89338510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_180456.nic	chr9	+	869	2	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-46	39262	-27	-10065	5prime_fragment	FALSE	canonical	3	289	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTTTCAAGGTTCATTT	-1	True	NA	NA	False	NA	NA	NA	89318472	89320380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_89318613_89319651
transcript_18046.known	chr1	-	3308	6	FSM	ENSG00000117280.13	ENST00000367139.8	3308	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	38.0809663742926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	-14	True	NA	-12	True	AATAAA	-19	NA	205775482	205767985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775272
transcript_180460.known	chr9	+	1066	4	FSM	ENSG00000130222.11	ENST00000252506.11	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	16.9901932498329	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	0	True	NA	NA	False	AATAAA	-15	NA	89605011	89606555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89605175_89605431_89605534_89605666_89605881_89605968
transcript_180461.nic	chr9	+	979	4	NIC	ENSG00000130222.11	novel	1066	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	91.927507671353	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	-4	True	NA	NA	False	AATAAA	-15	NA	89605007	89606555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89605175_89605431_89605534_89605757_89605881_89605968
transcript_180463.nic	chr9	+	1203	3	NIC	ENSG00000130222.11	novel	1066	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	202	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	-4	True	NA	NA	False	AATAAA	-15	NA	89605007	89606555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89605175_89605431_89605881_89605968
transcript_180464.nnic	chr9	+	968	3	NIC	ENSG00000130222.11	novel	1066	4	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	93.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	-4	True	NA	NA	False	AATAAA	-15	NA	89605007	89606555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89605175_89605666_89605881_89605968
transcript_180466.known	chr9	+	822	2	FSM	ENSG00000237372.4	ENST00000444374.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGCGGAGGCAAGCTG	-7	True	NA	NA	False	NA	NA	NA	89701650	89719670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89701989_89719186
transcript_180467.known	chr9	-	1096	3	FSM	ENSG00000231107.2	ENST00000425666.2	1096	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCACATTCCCTCTGCCT	NA	False	NA	-17	True	AATAAA	-26	NA	90433566	90300895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_90301654_90383519_90383722_90433430
transcript_180468.known	chr9	+	4973	14	FSM	ENSG00000165025.15	ENST00000375754.9	4973	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	6.71569741098989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATGATTTTCATGG	27	True	NA	12	True	AATAAA	-14	NA	90801818	90898549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_90801894_90843857_90844316_90845433_90845595_90862205_90862345_90864588_90864668_90865047_90865098_90867130_90867200_90874203_90874292_90874671_90874850_90877570_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
transcript_180470.known	chr9	+	4936	13	FSM	ENSG00000165025.15	ENST00000375751.8	4936	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	4.63680924774785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATGATTTTCATGG	-5	True	NA	12	True	AATAAA	-14	NA	90801786	90898549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_90801894_90843857_90844316_90845433_90845595_90862205_90862345_90864588_90864668_90865047_90865098_90874203_90874292_90874671_90874850_90877570_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
transcript_18048.nnic	chr1	-	1728	6	NNC	ENSG00000117280.13	novel	3308	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	35.8942892393762	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	-14	True	NA	NA	False	NA	NA	NA	205775482	205769436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775401
transcript_180482.known	chr9	-	1574	10	FSM	ENSG00000148090.12	ENST00000375731.9	1574	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	21.5721585542884	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAATTTTTCTCTTAC	-8	True	NA	-23	True	AATAAA	-17	NA	91361918	91213822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91361627
transcript_180484.known	chr9	-	1490	9	FSM	ENSG00000148090.12	ENST00000303617.5	1490	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	72.0059676346343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTACCCCATTCT	-3	True	NA	-15	True	AATAAA	-25	NA	91361913	91213814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91355882_91355971_91356087_91356156_91361627
transcript_180494.known	chr9	-	4158	9	FSM	ENSG00000169071.15	ENST00000375708.4	4158	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	15.6524758424985	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGGCTCTCTTGCAG	-16	True	NA	-10	True	AATAAA	-14	NA	91950228	91722600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91725108_91726540_91726744_91730909_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91949866
transcript_180497.nnic	chr9	-	4117	9	NNC	ENSG00000169071.15	novel	4158	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	40.3856410126173	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGGCTCTCTTGCAG	-9	True	NA	-10	True	AATAAA	-14	NA	91950221	91722600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_91725108_91726540_91726744_91730943_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91949866
transcript_180502.known	chr9	-	2993	13	FSM	ENSG00000169071.15	ENST00000375715.5	2993	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	69.5473459833899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGTTTTCAAGATTAAG	3613	False	NA	NA	False	AATAAA	-17	NA	91948880	91563090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91563330_91694319_91694412_91717306_91717397_91722525_91722581_91724153_91725108_91726540_91726744_91730909_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91948606
transcript_180509.known	chr9	-	370	2	FSM	ENSG00000169071.15	ENST00000493846.1	370	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGATGAGTTATTGATT	3778	False	NA	NA	False	ATTAAA	-21	NA	91948715	91923667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91923929_91948606
transcript_180514.known	chr9	-	2783	15	FSM	ENSG00000090054.16	ENST00000262554.7	2783	15	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_4	47.4012937910056	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGTCTATTTGCATAT	-9	True	NA	-11	True	AATAAA	-14	NA	92115413	92031146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_18052.known	chr1	-	1157	5	FSM	ENSG00000117280.13	ENST00000414729.1	1157	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	17.0348906659245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTCTTCCCTTTGGTT	9	True	NA	NA	False	NA	NA	NA	205775459	205770299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832
transcript_180521.known	chr9	-	946	6	FSM	ENSG00000090054.16	ENST00000337841.4	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	238.828306530026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTGGAAATAGCAT	60	False	NA	NA	False	AATAAA	-27	NA	92115383	92079060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_18053.known	chr1	-	1306	5	FSM	ENSG00000117280.13	ENST00000437324.6	1306	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	42.9614652915843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGGAGG	17	True	NA	NA	False	NA	NA	NA	205775451	205769702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205775272
transcript_180535.nnic	chr9	+	2718	10	NNC	ENSG00000234537.1	novel	1863	16	NA	NA	1792	0	intron_retention	FALSE	canonical	1	1	junction_5	3.94718214851814	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTCAGTGTGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	92134189	92138629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_92134248_92134742_92135632_92135734_92135894_92136252_92136321_92136449_92136538_92136643_92136723_92136811_92137207_92137302_92137420_92137523_92138171_92138411
transcript_180559.known	chr9	-	4443	34	FSM	ENSG00000196305.19	ENST00000683679.1	4443	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	436.012605019095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	9	True	NA	-21	True	AATAAA	-8	NA	92293689	92210348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_180560.known	chr9	-	4300	34	FSM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	401.350756511142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	5166	False	92293733	-21	True	AATAAA	-8	NA	92293716	92210348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_180562.known	chr9	-	4656	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_33	354.916079269664	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	-2	True	NA	-3	True	AATAAA	-15	NA	92293700	92210206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_180563.known	chr9	-	4597	34	FSM	ENSG00000196305.19	ENST00000683817.1	4597	34	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_14	409.955922735431	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGACTAGACATCTAATA	5028	False	NA	-39	True	CATAAA	-28	NA	92293854	92210242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253447_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_180567.known	chr9	-	4537	33	FSM	ENSG00000196305.19	ENST00000683192.1	4537	33	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_29	453.271127299931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	3	True	NA	-34	True	CATAAA	-33	NA	92293695	92210237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_180568.known	chr9	-	4213	33	FSM	ENSG00000196305.19	ENST00000682578.1	4213	33	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	398.616102127097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	3	True	NA	-21	True	AATAAA	-8	NA	92293695	92210348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_18058.known	chr1	-	1441	4	FSM	ENSG00000117280.13	ENST00000446390.6	1441	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	50.334437073991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	235	False	NA	NA	False	NA	NA	NA	205775233	205769717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205774832
transcript_180581.nic	chr9	-	2613	20	ISM	ENSG00000196305.19	ENST00000683469.1	4300	34	-25	45993	-7	-15579	5prime_fragment	FALSE	canonical	3	1054	junction_19	119.491049051065	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGGCCATGGAGGCG	5141	False	NA	NA	False	AATATA	-19	NA	92293741	92256341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_180586.nic	chr9	-	2067	17	ISM	ENSG00000196305.19	ENST00000684445.1	4403	33	-18	52620	3	17290	5prime_fragment	FALSE	canonical	3	448	junction_16	249.183784772906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCAACTTTGTTGTAG	-15	True	NA	NA	False	NA	NA	NA	92293713	92262968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_180587.nic	chr9	-	1925	17	ISM	ENSG00000196305.19	ENST00000683469.1	4300	34	-25	52620	-7	17290	5prime_fragment	FALSE	canonical	3	1054	junction_16	126.672914799297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCAACTTTGTTGTAG	5141	False	NA	NA	False	NA	NA	NA	92293741	92262968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_180592.nnic	chr9	-	2034	13	NIC	ENSG00000196305.19	novel	4186	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	566.467924707324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-2	True	NA	-17	True	AATAAA	-12	NA	92293700	92210344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92293610
transcript_180594.known	chr9	-	4370	34	FSM	ENSG00000196305.19	ENST00000684557.1	4370	34	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_12	390.433897220994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGACTAGACATCTAATA	3	True	NA	-39	True	CATAAA	-28	NA	92293695	92210242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_180596.known	chr9	-	3136	13	FSM	ENSG00000198000.12	ENST00000432670.6	3136	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	48.2378366937085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACGAAAAAAGAAAAGGG	-9	True	NA	NA	False	AGTAAA	-3	NA	92325358	92301816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
transcript_180597.nic	chr9	-	2987	12	ISM	ENSG00000198000.12	ENST00000544867.5	4598	17	-25	8158	-2	1175	5prime_fragment	FALSE	canonical	0	0	junction_6	45.5493556667149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGATGATAAGCCAAAAGAA	-14	True	NA	NA	False	AAGAAA	-3	NA	92325363	92305774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_180601.known	chr9	-	1098	7	FSM	ENSG00000198000.12	ENST00000421075.6	1098	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.9413544959374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCCATTACTCCTT	0	True	NA	NA	False	AATAGA	-43	NA	92325594	92315851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
transcript_180606.known	chr9	+	8293	8	FSM	ENSG00000188312.14	ENST00000375587.8	8293	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	5.79232426648951	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGGGCCTCACACATC	11	True	NA	NA	False	AATAAA	-17	NA	92325952	92620529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92379762_92379860_92611313_92611394_92612522_92612615_92613018
transcript_180609.known	chr9	-	4268	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	14.0185888495716	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCATCCTCCACGTT	12	True	NA	NA	False	AATAAA	-21	NA	92670131	92613182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
transcript_180618.known	chr9	-	4636	8	FSM	ENSG00000185963.14	ENST00000375512.3	4636	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	40.4010507036535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTCTCTGTGGTTGT	19	True	NA	-4	True	AATAAA	-24	NA	92764812	92711362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92713462_92715252_92715464_92717796_92717949_92718538_92719583_92720299_92720756_92722655_92722809_92729023_92729237_92764504
transcript_180620.known	chr9	-	6448	7	FSM	ENSG00000185963.14	ENST00000356884.11	6448	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	18.5539753152795	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTCTCTGTGGTTGT	-2	True	NA	-4	True	AATAAA	-24	NA	92764833	92711362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92715464_92717796_92717949_92718538_92719583_92720299_92720756_92722655_92722809_92729023_92729237_92764504
transcript_180626.known	chr9	-	2836	4	FSM	ENSG00000127081.14	ENST00000332591.6	2836	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	10.7082522694727	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCAGTCTTTCTTGTTTC	18	True	NA	-11	True	AGTAAA	-16	NA	92878022	92846068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877889
transcript_180628.known	chr9	+	3246	18	FSM	ENSG00000127084.19	ENST00000375482.8	3246	18	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	2.27518583597808	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCGCAGCCTCGGTGAT	0	True	NA	5	True	AATAAA	-16	NA	92947522	93036233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_92947730_92975237_92975406_92976207_92976710_93002924_93003015_93004000_93004138_93006023_93006181_93010245_93010385_93011213_93011273_93013851_93013999_93015736_93015830_93018135_93018216_93019830_93019862_93020316_93020425_93022326_93022390_93029873_93029997_93032768_93032874_93034540_93034682_93035337
transcript_18063.known	chr1	-	5017	11	FSM	ENSG00000133065.11	ENST00000367137.4	5017	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	12.6653069445632	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	-6	True	NA	-5	True	AATAAA	-16	NA	205813198	205789094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
transcript_180630.known	chr9	+	1196	5	FSM	ENSG00000157303.11	ENST00000375472.8	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7.66077672302228	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTACCTCAGCATCTT	-10	True	NA	27	True	AATAAA	-39	NA	93058700	93085133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93079470_93079603_93084536
transcript_180633.known	chr9	+	1076	4	FSM	ENSG00000157303.11	ENST00000617293.4	1076	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	16.779617264871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	-23	True	NA	26	True	AATAAA	-38	NA	93058687	93085132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93084536
transcript_180635.known	chr9	+	857	6	FSM	ENSG00000165233.18	ENST00000375464.7	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	47.0463601142533	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	-28	True	NA	11	True	ATTAAA	-17	NA	93096216	93113283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_180636.known	chr9	+	759	6	FSM	ENSG00000165233.18	ENST00000490488.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	57.1895095275349	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	8	False	NA	0	True	ATTAAA	-6	NA	93096314	93113272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_180638.known	chr9	+	660	5	FSM	ENSG00000165233.18	ENST00000468781.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	94.0132969318702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATAATTTGTGTAA	33	True	NA	27	True	NA	NA	NA	93096277	93113207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93112217_93112290_93112991
transcript_180639.nic	chr9	+	1198	5	NIC	ENSG00000165233.18	novel	759	6	NA	NA	-52	0	intron_retention	FALSE	canonical	3	97	junction_2	63.8396428561439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTCGTTCCTCAGT	-5	True	NA	10	True	ATTAAA	-16	NA	93096164	93113282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93112290_93112991
transcript_18064.nic	chr1	-	4739	11	NIC	ENSG00000133065.11	novel	5017	11	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_10	33.3683982234689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	NA	False	NA	-5	True	AATAAA	-16	NA	205813807	205789094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205813694
transcript_180640.nic	chr9	+	829	5	NIC	ENSG00000165233.18	novel	759	6	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	97.4858964158406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTCGTTCCTCAGT	25	False	NA	10	True	ATTAAA	-16	NA	93096194	93113282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_93096353_93107673_93107828_93110567_93110722_93112217_93112290_93112991
transcript_180643.known	chr9	+	2291	4	FSM	ENSG00000165233.18	ENST00000466409.1	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	60.7014552269274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTCGTTCCTCAGT	-27	True	NA	10	True	ATTAAA	-16	NA	93096217	93113282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93112290_93112991
transcript_180644.nic	chr9	+	2302	4	NIC	ENSG00000165233.18	novel	2291	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	97	junction_2	73.4135924441486	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTCGTTCCTCAGT	-27	True	NA	10	True	ATTAAA	-16	NA	93096217	93113282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_93096353_93107673_93107828_93110567_93112290_93112991
transcript_180648.known	chr9	-	861	5	FSM	ENSG00000131669.10	ENST00000461162.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.838439659934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGGCTGGATGAGTG	2062	False	NA	NA	False	NA	NA	NA	93134219	93121896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93131484_93131542_93134142
transcript_180649.known	chr9	-	834	4	FSM	ENSG00000131669.10	ENST00000470314.5	834	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	167.949066353132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTCTCCCTCTCCCAA	9	True	NA	NA	False	NA	NA	NA	93134238	93121832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126586_93134142
transcript_180650.known	chr9	-	1237	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	16.8193010820572	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATCTCCCTGTTCCC	-4	True	NA	-28	True	AATAAA	-25	NA	93134251	93121495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
transcript_180652.known	chr9	-	488	2	FSM	ENSG00000131669.10	ENST00000490564.1	488	2	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTTGTTTTGTTTTG	2062	False	NA	NA	False	NA	NA	NA	93134219	93126227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93126639_93134142
transcript_180658.known	chr9	-	1154	5	FSM	ENSG00000204352.4	ENST00000648864.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	24.6513184231594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGCAAATGAAACCT	213	False	NA	NA	False	AATAAA	-17	NA	93346414	93318198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073
transcript_180667.known	chr9	-	467	3	FSM	ENSG00000204352.4	ENST00000649569.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	3	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGTGCGTGGGTCGC	475	False	NA	NA	False	NA	NA	NA	93346152	93335373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93335661_93335875_93335977_93346073
transcript_180672.known	chr9	+	5160	18	FSM	ENSG00000048828.17	ENST00000277165.11	5160	18	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	13.3846475085202	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTGGCTTTTAAAT	5	True	NA	15	True	AATAAA	-24	NA	93451684	93566112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515768_93515982_93516270_93527154_93527243_93529352_93529581_93532154_93532330_93543221_93543472_93550576_93550692_93556381_93556592_93557826_93558011_93558580_93558719_93561108_93561251_93562207_93562305_93564228
transcript_180683.known	chr9	-	830	4	FSM	ENSG00000188938.17	ENST00000428152.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.305202719571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACCAAGGTAGACAGAC	2459	False	NA	NA	False	AAGAAA	-26	NA	93451114	93447267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93448368_93448490_93450478_93450588_93450944
transcript_180684.known	chr9	-	1491	4	FSM	ENSG00000188938.17	ENST00000476484.5	1491	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.992294998255	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCGCTTCATAGGTTC	20	True	NA	NA	False	NA	NA	NA	93451562	93446923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93451087
transcript_180699.known	chr9	-	426	3	FSM	ENSG00000188938.17	ENST00000428378.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCATTCTTGAGTCCAAT	2590	False	NA	NA	False	AAGAAA	-22	NA	93450983	93447634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450478_93450600_93450741
transcript_180700.known	chr9	-	1846	3	FSM	ENSG00000188938.17	ENST00000520403.1	1846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTTGAAGTAAACTATA	-4	True	NA	-52	True	NA	NA	NA	93451512	93446532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450474_93450588_93450944
transcript_180702.known	chr9	-	1735	3	FSM	ENSG00000188938.17	ENST00000523407.1	1735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAACTATATTTTACAA	-16	True	NA	-44	True	NA	NA	NA	93451524	93446524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450474_93450600_93451087
transcript_180705.nnic	chr9	-	1949	3	NNC	ENSG00000188938.17	novel	1905	3	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	1949	False	NA	-13	True	AGTAAA	-25	NA	93451624	93446493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_93447698_93450478_93450600_93451000
transcript_180707.known	chr9	-	5922	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-8	True	NA	-25	True	AATAAA	-16	NA	93453581	93443331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450478_93450600_93452146
transcript_180708.known	chr9	-	1432	3	FSM	ENSG00000188938.17	ENST00000483149.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGTTTTTATCTTTTA	316	False	NA	NA	False	NA	NA	NA	93453257	93446904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450478_93450600_93452739
transcript_180711.known	chr9	+	5392	22	FSM	ENSG00000197724.11	ENST00000359246.9	5392	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_16	7.42979232946365	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCATTTCTG	-34	True	NA	18	True	AGTAAA	-24	NA	93576583	93679587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93576872_93629969_93630056_93636410_93636526_93645628_93645790_93649070_93649213_93653178_93653366_93654412_93654576_93655933_93656022_93656488_93656596_93658144_93658237_93659510_93659601_93660191_93660561_93662906_93663027_93663516_93663636_93665685_93665865_93665989_93666061_93667079_93667241_93673584_93673863_93674926_93675023_93675679_93675790_93676593_93676964_93677587
transcript_180715.known	chr9	+	4517	10	FSM	ENSG00000158079.16	ENST00000375360.7	4517	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.03957069398096	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAGTCCTGTACTTCTTT	NA	False	NA	10	True	AATAAA	-22	NA	94030793	94109856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94031128_94064733_94064822_94085250_94085423_94087830_94087912_94088144_94088264_94095316_94095455_94097320_94098580_94101565_94101752_94104274_94104386_94107827
transcript_180721.known	chr9	+	2374	5	FSM	ENSG00000175787.17	ENST00000395395.7	2374	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.68954408012983	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACAGTCACACTACACA	-14	True	NA	NA	False	NA	NA	NA	94259297	94301829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94259346_94278757_94278846_94292340_94292468_94292973_94293070_94299814
transcript_180723.known	chr9	+	509	2	FSM	ENSG00000269929.4	ENST00000660581.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCGGTTTCGGGTATTT	12	True	NA	NA	False	AATAAA	-17	NA	94166289	94200902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94166382_94200485
transcript_180726.nnic	chr9	+	1763	3	NNC	ENSG00000232063.2	novel	4244	3	NA	NA	6430	-2044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAACATGTGAGGCCCA	NA	False	NA	NA	False	AAAACA	-21	NA	94338888	94360969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_94339021_94354524_94354671_94359484
transcript_180727.known	chr9	-	1473	7	FSM	ENSG00000165140.12	ENST00000375326.9	1473	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	2.06155281280883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	11	True	NA	NA	False	AATAAA	-22	NA	94639518	94603132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140
transcript_180728.known	chr9	+	1164	3	FSM	ENSG00000231806.4	ENST00000452148.3	1193	3	15	14	-14	-14	multi-exon	FALSE	canonical	2	10	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTGTG	-13	True	NA	NA	False	NA	NA	NA	94555068	94568127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94555311_94558968_94559153_94567389
transcript_18073.known	chr1	+	6884	23	FSM	ENSG00000266028.8	ENST00000573034.8	6884	23	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_21	67.2332961835316	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGTTCATATCCCTT	0	True	NA	8	True	AATAAA	-20	NA	206203540	206464436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206458622_206458948_206461036
transcript_180732.known	chr9	+	3974	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	1	True	NA	NA	False	AATAAA	-3	NA	94555082	94570916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94555346_94558968_94559153_94567389
transcript_180733.known	chr9	-	1424	7	FSM	ENSG00000165140.12	ENST00000682520.1	1424	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.60675832036175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCCCTTGCTTTGTGTC	975	False	NA	NA	False	AATAAA	-21	NA	94639310	94603133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_94603573_94605456_94605577_94606814_94607113_94609920_94610062_94617767_94617861_94620328_94620492_94639140
transcript_180743.nic	chr9	+	913	6	NIC	ENSG00000148120.18	novel	919	6	NA	NA	273	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.3052437937981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACGTGTTTGCTTCTA	-22	True	NA	12	True	AATAAA	-19	NA	95004189	95087155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_180744.known	chr9	+	478	6	FSM	ENSG00000148120.18	ENST00000471978.5	478	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.5918350340135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCGAACTGACCCTGG	0	True	NA	NA	False	NA	NA	NA	95004979	95086731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95005066_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_180747.known	chr9	-	4533	15	FSM	ENSG00000158169.13	ENST00000375305.6	4533	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	15.025997878507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGTATCCATTAAATAT	450	False	NA	-1	True	AATAAA	-18	NA	95317254	95099054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317128
transcript_180748.known	chr9	-	4592	15	FSM	ENSG00000158169.13	ENST00000289081.8	4592	15	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	8.81441305765849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	-5	True	NA	0	True	AATAAA	-19	NA	95317709	95099053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_180756.known	chr9	-	2387	14	FSM	ENSG00000158169.13	ENST00000490972.7	2387	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	13.9402783669031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCACGTATGTATTTGA	33	False	NA	NA	False	AATAAA	-18	NA	95317671	95110511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95111346_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_180763.known	chr9	-	1404	2	FSM	ENSG00000158169.13	ENST00000433644.2	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTATTCTT	29	False	NA	-6	True	AATAAA	-18	NA	95426796	95414833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95416165_95426723
transcript_180764.known	chr9	+	1402	1	FSM	ENSG00000271155.1	ENST00000604104.1	1402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGCTGCCAAAAAAGGAAA	20	False	NA	NA	False	NA	NA	NA	95506234	95507636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95506200_95507600
transcript_180765.known	chr9	-	962	2	FSM	ENSG00000175611.13	ENST00000670189.2	1384	2	422	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTTAAAGAGTAATT	-18	True	NA	NA	False	AATAAA	-13	NA	95875587	95870087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95870442_95874979
transcript_180767.known	chr9	-	1148	2	FSM	ENSG00000175611.13	ENST00000671508.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATCATACTGCATAT	-1	True	NA	37	True	NA	NA	NA	95875461	95870246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95870442_95874508
transcript_180769.known	chr9	+	10245	19	FSM	ENSG00000182150.19	ENST00000653738.2	10245	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	11.5139475269918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACATAGCATTGTTTT	1	True	NA	18	True	ATTAAA	-15	NA	95875690	96018447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971932_95973089_95978060_95978216_96004519_96004702_96012224
transcript_180772.nic	chr9	+	3042	16	ISM	ENSG00000182150.19	ENST00000683350.1	4826	18	-65	8320	-37	0	5prime_fragment	FALSE	canonical	3	43	junction_3	11.2178429299041	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCAAGTCTGACGAGAA	-4	True	NA	NA	False	TATAAA	-28	NA	95875618	95972373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971932
transcript_180777.known	chr9	+	2186	2	FSM	ENSG00000182150.19	ENST00000665077.3	2186	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAAATAATGCTACTGT	18	False	NA	NA	False	AAAAAG	-16	NA	95875707	95882677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95876085_95880868
transcript_180778.known	chr9	-	1623	12	FSM	ENSG00000130958.13	ENST00000253270.13	1623	12	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_8	28.1515966988413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCCTCATCATGTGAT	-9	True	NA	-10	True	AATAAA	-13	NA	96383711	96320709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96321342_96321997_96322081_96324090_96324170_96336716_96336785_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
transcript_18078.nic	chr1	+	6937	23	NIC	ENSG00000266028.8	novel	6884	23	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	68.1506747054636	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGTTCATATCCCTT	NA	False	NA	8	True	AATAAA	-20	NA	206203484	206464436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401423_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206458622_206458948_206461036
transcript_180784.known	chr9	+	2651	8	FSM	ENSG00000130956.14	ENST00000375249.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	16.3445054113869	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGTAGAGAAAACAGT	-19	True	NA	15	True	AATAAA	-20	NA	96450168	96491336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96471010_96471095_96484461_96484634_96488088_96488275_96489981
transcript_180787.known	chr9	-	2899	6	FSM	ENSG00000158122.12	ENST00000375234.8	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	7.95989949685296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-14	True	NA	NA	False	AATAAA	-21	NA	96655317	96639576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655089
transcript_18079.nic	chr1	+	3574	22	NIC	ENSG00000266028.8	novel	6884	23	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_21	74.2566182334876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGATGCTTGTTGTTT	NA	False	NA	-16	True	NA	NA	NA	206203484	206456131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206455772
transcript_180790.nic	chr9	-	1098	5	NIC	ENSG00000158122.12	novel	2899	6	NA	NA	-20	-1689	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	18.7882942280559	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCAGTAGGTATCTCT	-1	True	NA	-25	True	AATAAA	-9	NA	96655337	96641265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_96641887_96651389_96651496_96651658_96651713_96654704_96654774_96655089
transcript_180792.known	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	11.2712022428843	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-8	True	NA	-3	True	AATAAA	-20	NA	96778087	96754552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
transcript_180795.known	chr9	+	841	4	FSM	ENSG00000224848.3	ENST00000666834.2	897	4	54	2	17	0	multi-exon	FALSE	canonical	3	11	junction_1	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	24	False	NA	6	True	AATAAA	-14	NA	96687076	96773977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96773459
transcript_180797.known	chr9	+	1299	3	FSM	ENSG00000224848.3	ENST00000661289.2	1301	3	2	0	2	0	multi-exon	FALSE	canonical	3	16	junction_1	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAACTGTATTAATAA	-3	True	NA	NA	False	AATAAA	-2	NA	96687049	96774318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687325_96720965_96721131_96773459
transcript_180799.known	chr9	+	774	3	FSM	ENSG00000224848.3	ENST00000656729.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	2	True	NA	6	True	AATAAA	-14	NA	96687054	96773977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687146_96720965_96721131_96773459
transcript_180800.known	chr9	+	766	2	FSM	ENSG00000224848.3	ENST00000653137.2	785	2	17	2	17	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	24	False	NA	6	True	AATAAA	-14	NA	96687076	96773977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687325_96773459
transcript_180804.nnic	chr9	-	996	5	NNC	ENSG00000196312.15	novel	1802	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	139.385033271151	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTCTATTCTAATGA	NA	False	NA	-1	True	AATAAA	-16	NA	97013725	96942912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_96943155_96949554_96949683_96958834_96958898_96972852_96972949_97013258
transcript_180805.known	chr9	-	1802	5	FSM	ENSG00000196312.15	ENST00000637864.1	1802	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	163.394270095374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTCTATTCTAATGA	-1	True	NA	-1	True	AATAAA	-16	NA	97013600	96942912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96944086_96949554_96949683_96958834_96958898_96972852_96972949_97013258
transcript_180811.known	chr9	-	395	4	FSM	ENSG00000196312.15	ENST00000650909.1	395	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	77.9116308533086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGACTTGGCCCTTCA	233	False	NA	-107	True	NA	NA	NA	97013366	96949554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96949683_96958834_96958898_96972852_96972949_97013258
transcript_180814.known	chr9	-	4497	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	890.940505519308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-1	True	NA	2	True	AGTAAA	-19	NA	97039142	97029676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
transcript_180815.known	chr9	-	4481	8	FSM	ENSG00000136943.12	ENST00000680385.1	4481	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	753.603506426263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-1	True	NA	2	True	AGTAAA	-19	NA	97039142	97029676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036400_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_180817.known	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	706.695269604681	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	1	True	NA	-26	True	AATAAA	-19	NA	97039140	97032654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
transcript_180818.known	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	2	154	junction_4	710.677141886525	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	2	True	NA	-26	True	AATAAA	-19	NA	97039139	97032654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_180820.known	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	169.532363347599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	483	False	NA	-26	True	AATAAA	-19	NA	97039174	97032654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
transcript_180827.known	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	185.675415712474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	2	True	NA	29	True	AAAAAG	-12	NA	97039139	97032685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
transcript_180833.nic	chr9	-	1176	5	ISM	ENSG00000136943.12	ENST00000259470.6	4359	8	-24	6397	8	180	5prime_fragment	FALSE	canonical	3	1978	junction_2	185.6655258792	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGCCTTTGCACAGTT	491	False	NA	NA	False	NA	NA	NA	97039166	97036073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_180885.nnic	chr9	+	761	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-86	5049	multi-exon	FALSE	canonical	3	1461	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	28	True	AATAAA	-22	NA	97214747	97219978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr9_+_97215114_97219583
transcript_180887.known	chr9	-	578	2	FSM	ENSG00000203279.5	ENST00000366109.2	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTACTTCGAGCTCCG	40	True	NA	NA	False	AATAAA	-28	NA	97238678	97237763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97238086_97238422
transcript_180888.known	chr9	+	3688	17	FSM	ENSG00000196116.8	ENST00000355295.5	3688	17	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_8	19.4615004560286	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTACCTTTTAATTTC	-32	True	NA	NA	False	AATAAA	-20	NA	97412095	97496125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97412239_97428459_97428673_97430932_97431075_97432024_97432239_97439244_97439319_97441657_97441876_97460177_97460765_97464841_97465029_97470557_97470670_97472292_97472496_97473491_97473627_97475382_97475470_97478438_97478574_97480827_97480939_97482848_97483352_97487171_97487333_97495662
transcript_180889.known	chr9	+	3311	10	FSM	ENSG00000136842.14	ENST00000259365.9	3311	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.10359673613764	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGGTTTGAACTGCA	-3	True	NA	27	True	AATAAA	-21	NA	97501665	97601743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97501804_97524140_97524309_97546184_97546342_97553280_97553401_97562731_97562822_97564037_97564169_97565847_97565956_97568893_97569038_97591290_97591436_97599633
transcript_18089.known	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	80.3008232972877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	424	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
transcript_180894.known	chr9	-	4116	10	FSM	ENSG00000136925.15	ENST00000341170.5	4116	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	13.6959938271591	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAGAGTGTGCCGTTT	3	True	NA	-1	True	AATAAA	-25	NA	97633368	97600079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97602768_97604726_97604866_97605482_97605642_97606142_97606262_97610345_97610452_97611573_97611700_97617756_97617878_97625680_97625998_97627397_97627613_97633242
transcript_180898.nic	chr9	-	686	2	ISM	ENSG00000136925.15	ENST00000375172.6	1503	10	-433	24701	-366	-16574	5prime_fragment	FALSE	canonical	3	124	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTCGTTTGCAAAGAAAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	97633734	97627418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_97627613_97633242
transcript_18090.known	chr1	-	2364	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	47.7656315310031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	31	False	NA	NA	False	AATAAA	-20	NA	206202839	206186178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
transcript_180900.known	chr9	+	4983	23	FSM	ENSG00000136937.13	ENST00000375147.8	4983	23	0	0	0	0	multi-exon	TRUE	canonical	3	421	junction_4	40.4937501554609	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTTTCCTAATTTA	0	True	NA	16	True	AGTAAA	-1	NA	97633820	97673748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97633916_97640793_97640883_97641561_97641663_97643203_97643361_97645116_97645225_97645610_97645733_97647491_97647562_97648007_97648224_97650502_97650601_97651309_97651374_97653797_97653909_97654879_97654945_97655701_97655765_97656010_97656086_97658639_97658744_97660945_97661069_97662041_97662145_97662953_97663048_97664339_97664444_97666762_97666878_97668845_97668975_97669592_97669707_97671085
transcript_180910.known	chr9	-	1400	6	FSM	ENSG00000136936.11	ENST00000375128.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	3.13687742827162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-17	True	NA	-1	True	AATAAA	-22	NA	97697340	97674908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_180912.nic	chr9	-	757	5	ISM	ENSG00000136936.11	ENST00000375128.5	1400	6	-74	10052	-74	0	5prime_fragment	FALSE	canonical	3	75	junction_1	2.87228132326901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACAGAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	97697414	97684960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_180913.known	chr9	-	1577	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.41774882649672	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	12	True	NA	42	True	ATTAAA	-15	NA	97922500	97904488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
transcript_180916.known	chr9	+	1483	7	FSM	ENSG00000136938.9	ENST00000339399.5	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	33.7412540108133	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTATGCTTACAT	-9	True	NA	7	True	AATAAA	-19	NA	97983340	98015943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97983610_97994630_97994781_97998555_97998679_98004963_98005154_98011270_98011390_98012420_98012473_98015363
transcript_18092.known	chr1	+	3240	22	FSM	ENSG00000263528.8	ENST00000581977.7	3240	22	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	5.37736922418785	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGCTCTCCCTGGGC	-10	True	NA	15	True	AATAAA	-20	NA	206470475	206496889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493265_206493379_206493919_206493992_206496111
transcript_180922.known	chr9	+	1179	6	FSM	ENSG00000095380.11	ENST00000210444.6	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_3	60.068627418978	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	9	True	NA	20	True	AATAAA	-16	NA	98056731	98083077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_98056941_98060781_98060998_98076917_98077018_98078192_98078348_98080815_98081083_98082845
transcript_180923.known	chr9	-	4480	6	FSM	ENSG00000106785.15	ENST00000341469.7	4480	6	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_4	28.2658804922118	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCTTCACTGGGAGT	-6	True	NA	-1	True	AATAAA	-23	NA	98119222	98084352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98088006_98091908_98092002_98094866_98095030_98099930_98100165_98109888_98109985_98118981
transcript_180935.nnic	chr9	+	993	4	NIC	ENSG00000095380.11	novel	1179	6	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	392.204311835327	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	NA	False	NA	20	True	AATAAA	-16	NA	98056662	98083077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_98056941_98060781_98060998_98080815_98081083_98082845
transcript_180939.known	chr9	-	5456	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_11	20.6020940923911	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTCCTTTTCTTGAT	12	True	NA	-2	True	AATAAA	-22	NA	98192637	98120974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_18094.known	chr1	+	2493	21	FSM	ENSG00000263528.8	ENST00000578328.6	2493	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	7.98999374217527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	9	True	NA	NA	False	NA	NA	NA	206470494	206496274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493919_206493992_206496111
transcript_180942.known	chr9	-	5635	12	FSM	ENSG00000106789.13	ENST00000343933.9	5635	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_11	73.5344974420142	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTCCTTTTCTTGAT	NA	False	NA	-2	True	AATAAA	-22	NA	98172884	98120974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98172626
transcript_180945.nnic	chr9	-	2360	12	NNC	ENSG00000106789.13	novel	5456	12	NA	NA	-30	-3032	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	65.0465821641666	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGCCAACATGGTG	-18	True	NA	NA	False	AAAAAG	-8	NA	98192667	98124006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_98124906_98126642_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_180949.nnic	chr9	-	2194	12	NNC	ENSG00000106789.13	novel	5456	12	NA	NA	-38	-3206	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	65.0465821641666	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCGTGGTGGCAG	NA	False	NA	NA	False	AATACA	-7	NA	98192675	98124180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_98124906_98126642_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_18096.known	chr1	+	2487	21	FSM	ENSG00000263528.8	ENST00000584998.5	2487	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7.56571212775109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	9	True	NA	NA	False	NA	NA	NA	206470494	206496274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493265_206493379_206493919_206493992_206496111
transcript_180972.known	chr9	-	3174	13	FSM	ENSG00000095383.20	ENST00000375064.5	3174	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.80185640013609	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTGGAACTTAAACA	9843	False	NA	-15	True	TATAAA	-27	NA	98255580	98199028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98199585_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
transcript_180974.known	chr9	-	3046	12	FSM	ENSG00000095383.20	ENST00000342112.9	3046	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	9.33225101949734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTGGAACTTAAACA	12	True	NA	-15	True	TATAAA	-27	NA	98255590	98199028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98255172
transcript_180980.nnic	chr9	-	1950	7	NNC	ENSG00000095383.20	novel	3265	13	NA	NA	0	-8016	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.3782964184181	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATGAGCACATCTAGG	-6	True	NA	NA	False	AATAAA	-23	NA	98255649	98216690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_98217198_98220150_98220254_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98255172
transcript_180991.known	chr9	+	5933	9	FSM	ENSG00000106799.13	ENST00000552516.5	5933	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	160.310587220558	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATTTTAAAATAAAGTG	1	True	NA	-1	True	AATAAA	-25	NA	99105149	99153658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99105303_99128854_99129101_99132496_99132740_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
transcript_180993.known	chr9	-	2966	3	FSM	ENSG00000119523.10	ENST00000238477.5	2966	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTGGCATTGTGAA	-14	True	NA	-2	True	ATTAAA	-17	NA	99221942	99216425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99218837_99220978_99221138_99221546
transcript_180994.known	chr9	-	2808	2	FSM	ENSG00000119523.10	ENST00000476832.2	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGGCATTGTGAAA	-14	True	NA	-1	True	ATTAAA	-18	NA	99221942	99216424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99218837_99221546
transcript_180995.known	chr9	-	1627	2	FSM	ENSG00000119523.10	ENST00000319033.7	1627	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAAAGAAACAGTATTA	841	False	NA	42	True	AATAAA	-12	NA	99221140	99217371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99218837_99220978
transcript_180999.known	chr9	+	564	4	FSM	ENSG00000106803.10	ENST00000223641.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	3374	junction_1	105.963306017801	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	7	True	NA	27	True	AATAAA	-19	NA	99222281	99230615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336
transcript_181.known	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8723.12040810632	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_181000.known	chr9	+	687	2	FSM	ENSG00000106803.10	ENST00000481573.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	3374	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGCTCTTTCCTTTTCCC	0	True	NA	NA	False	TTTAAA	-21	NA	99222314	99223180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99222367_99222545
transcript_181002.known	chr9	+	6885	8	FSM	ENSG00000136874.11	ENST00000259400.11	6885	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	15.3197218496623	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	-12	True	NA	18	True	AATAAA	-18	NA	99906653	99974534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
transcript_181006.known	chr9	-	4808	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_10	41.4804544234216	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAGTAAAAAAAAAAAA	5	True	NA	NA	False	AATAAA	-21	NA	100099000	99979184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
transcript_181009.known	chr9	+	2968	18	FSM	ENSG00000119509.13	ENST00000262456.6	2968	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	10.2757819897918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTCACCTAAAAATGTG	3	True	NA	-29	True	NA	NA	NA	100099274	100300788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100292437_100292946_100293044_100296916_100297147_100297935_100298011_100300567
transcript_181010.known	chr9	+	4897	17	FSM	ENSG00000119509.13	ENST00000262457.7	4897	17	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	8.6421930087218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTATGGCCTCTTCAAT	-29	True	NA	13	True	AATAAA	-16	NA	100099242	100302175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100293044_100296916_100297147_100297935_100298011_100300567
transcript_181012.nnic	chr9	-	2835	16	NNC	ENSG00000136891.14	novel	3077	15	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_13	163.596441145752	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	NA	False	NA	-14	True	ATTAAA	-18	NA	100352988	100302083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100346879_100347166_100347407_100349183_100349373_100352771
transcript_181016.known	chr9	-	3077	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_12	64.6649133642671	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	-14	True	NA	-14	True	ATTAAA	-18	NA	100352942	100302083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_181028.nic	chr9	-	1984	8	ISM	ENSG00000136891.14	ENST00000374902.9	3077	15	-46	25746	-46	1356	5prime_fragment	FALSE	canonical	3	550	junction_5	80.5762409910322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTACTAAAAAGTTTACA	NA	False	NA	NA	False	AATAAA	-1	NA	100352988	100327829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_181029.known	chr9	+	1880	3	FSM	ENSG00000066697.15	ENST00000395067.7	1880	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	80.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	-6	True	NA	NA	False	ATTAAA	-21	NA	100427142	100451734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100427394_100441905_100442357_100450556
transcript_181031.known	chr9	+	710	3	FSM	ENSG00000066697.15	ENST00000374886.7	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGGAGCAAAACCTC	42	False	NA	NA	False	AATAAA	-1	NA	100427436	100450681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100427571_100441905_100442357_100450556
transcript_181037.known	chr9	+	1755	3	FSM	ENSG00000066697.15	ENST00000613183.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	181.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTG	2119	False	NA	NA	False	AAGAAA	-42	NA	100429513	100451711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100429663_100441905_100442357_100450556
transcript_181039.known	chr9	+	2575	10	FSM	ENSG00000241697.5	ENST00000374879.5	2575	10	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_7	59.7087581722241	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGTTTTGGTGTGT	-3	True	NA	23	True	AATATA	-15	NA	100473148	100577636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515
transcript_181041.known	chr9	+	2477	8	FSM	ENSG00000148123.15	ENST00000374874.8	2477	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.46410161513775	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCATGTCTTTTGT	-19	True	NA	17	True	AAAAAG	-16	NA	101028726	101325135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101029103_101185449_101185558_101269879_101270069_101286103_101286237_101309210_101309462_101312797_101312975_101317364_101317497_101324024
transcript_181042.known	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-9	True	NA	-2	True	AATAAA	-16	NA	101398618	101387632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_101390851_101398500
transcript_181044.known	chr9	+	3115	4	FSM	ENSG00000136870.11	ENST00000259395.4	3115	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.31816613336672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	145	False	NA	26	True	ATTAAA	-23	NA	101399027	101410660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101399190_101399394_101399531_101399925_101400011_101407928
transcript_181045.known	chr9	+	3192	3	FSM	ENSG00000136870.11	ENST00000339664.7	3192	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGTAAGAGTTGTTA	-32	True	NA	20	True	ATTAAA	-17	NA	101398850	101410654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101399190_101399883_101400011_101407928
transcript_181046.known	chr9	+	3134	3	FSM	ENSG00000136870.11	ENST00000374861.7	3134	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	-10	True	NA	26	True	ATTAAA	-23	NA	101398872	101410660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101399190_101399925_101400011_101407928
transcript_181048.known	chr9	-	4225	2	FSM	ENSG00000165152.9	ENST00000374848.8	4225	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGAAGACTTTTATC	1	True	NA	-16	True	AATAAA	-21	NA	101487173	101473169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_101477170_101486948
transcript_181050.known	chr9	+	3938	20	FSM	ENSG00000155827.12	ENST00000389120.8	3938	20	0	0	0	0	multi-exon	FALSE	canonical	2	109	junction_4	30.8889531033785	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATGGTTTTTCT	-7	True	NA	18	True	ATTAAA	-18	NA	101533852	101563344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693_101554844_101557383_101557597_101560800_101560927_101561089_101561231_101561909_101562012_101562245
transcript_181051.nic	chr9	+	2166	15	ISM	ENSG00000155827.12	ENST00000389120.8	3938	20	-17	8609	-17	-6717	5prime_fragment	FALSE	canonical	2	109	junction_4	30.9927575476621	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAAAGAGAACAAGAA	NA	False	NA	NA	False	GATAAA	-1	NA	101533835	101554735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693
transcript_181053.nic	chr9	+	1849	13	ISM	ENSG00000155827.12	ENST00000389120.8	3938	20	-17	10748	-17	-8856	5prime_fragment	FALSE	canonical	2	109	junction_4	32.4135602624718	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACGGGAGAAGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	101533835	101552596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382
transcript_181054.nic	chr9	+	1967	13	ISM	ENSG00000155827.12	ENST00000389120.8	3938	20	-17	10630	-17	-8738	5prime_fragment	FALSE	canonical	2	109	junction_4	32.4135602624718	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGCAGAAATTATCAAAC	NA	False	NA	NA	False	GATAAA	-33	NA	101533835	101552714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382
transcript_181055.known	chr9	+	5928	25	FSM	ENSG00000136824.19	ENST00000374793.8	5928	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	46.5116286236273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGAGCAGTATGTAC	-7	True	NA	9	True	AATAAA	-14	NA	104094308	104141419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_181058.nic	chr9	+	2581	18	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-58	16472	-9	-14704	5prime_fragment	FALSE	canonical	3	105	junction_1	41.1082628355468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAGAAAAGCAGAAGAA	NA	False	NA	NA	False	ACTAAA	-5	NA	104094250	104124947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_18106.known	chr1	+	678	5	FSM	ENSG00000263528.8	ENST00000579827.6	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.12372435695795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATGTTCACAGCAGCA	156	False	NA	5	True	ATTAAA	-17	NA	206470641	206475135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864
transcript_181060.known	chr9	+	4266	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	58.7024038879348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	-35	True	NA	12	True	ATTAAA	-16	NA	104094563	104139651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_181071.nic	chr9	+	1158	8	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-58	39226	-9	0	5prime_fragment	FALSE	canonical	3	105	junction_1	47.4754501542317	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	NA	False	NA	NA	False	AATAGA	-26	NA	104094250	104102193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_181072.nnic	chr9	+	1119	8	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	65.9885580681861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	NA	False	NA	NA	False	AATAGA	-26	NA	104094260	104102193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_181076.nnic	chr9	+	1008	7	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	81.9011938591591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	NA	False	NA	NA	False	AATAGA	-26	NA	104094250	104102193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_104094478_104095323_104095553_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_181077.nic	chr9	+	851	6	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-58	41244	-9	-2018	5prime_fragment	FALSE	canonical	3	105	junction_1	53.5522175077746	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGCTAAGCTGAAAGAAA	NA	False	NA	NA	False	AATACA	-35	NA	104094250	104100175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092
transcript_181082.known	chr9	+	705	6	FSM	ENSG00000136824.19	ENST00000440179.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.5769202314331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	-20	True	NA	NA	False	AATAGA	-26	NA	104094295	104102193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_104094449_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_181084.known	chr9	+	1636	6	FSM	ENSG00000136783.10	ENST00000374767.5	1636	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	15.0519101777814	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	-2	True	NA	7	True	AATAAA	-14	NA	104747682	104760120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084_104759172_104759261
transcript_181093.nnic	chr9	-	1217	3	NNC	ENSG00000286536.1	novel	2813	8	NA	NA	-5979	-172449	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	0.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAGTTAGTTCCCAAC	391	False	NA	NA	False	NA	NA	NA	105245200	105198380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_105199359_105226596_105226654_105245018
transcript_181095.nic	chr9	+	3825	17	NIC	ENSG00000070214.16	novel	10482	16	NA	NA	-14	-5567	intron_retention	FALSE	canonical	2	7	junction_3	186.212076676031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGCATTTTATCATTC	-23	True	NA	NA	False	AATACA	-32	NA	105244607	105390451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_105244905_105299219_105299310_105299742_105299938_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032
transcript_181096.known	chr9	+	10433	17	FSM	ENSG00000070214.16	ENST00000470972.5	10433	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	142.860727633594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	-9	True	NA	9	True	AATAAA	-21	NA	105244621	105397346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032_105389109_105389186
transcript_181099.known	chr9	+	10482	16	FSM	ENSG00000070214.16	ENST00000374720.8	10482	16	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_12	54.7795582311504	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	20	True	NA	9	True	AATAAA	-21	NA	105244650	105397346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032
transcript_181102.known	chr9	+	9640	16	FSM	ENSG00000070214.16	ENST00000374723.5	9640	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_15	145.654141337927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	-9	True	NA	9	True	AATAAA	-21	NA	105244621	105397346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389903
transcript_181103.known	chr9	+	3088	16	FSM	ENSG00000070214.16	ENST00000374724.1	3088	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	145.422082993685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGGCTGCTTCTGCC	-9	True	NA	NA	False	AATAAA	-36	NA	105244621	105439171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105438280
transcript_181112.known	chr9	+	668	1	FSM	ENSG00000186051.7	ENST00000334077.6	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTATACTCAATGT	6197	False	NA	NA	False	AATAAA	-20	NA	105662456	105663124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105662500_105663100
transcript_181114.known	chr9	+	3545	6	FSM	ENSG00000095209.12	ENST00000374692.8	3545	6	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_5	18.4455956802701	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTGGTAATATTCATT	-3	True	NA	19	True	AATAAA	-34	NA	105694540	105776629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105748072_105748191_105773864
transcript_181121.known	chr9	+	10345	13	FSM	ENSG00000148143.13	ENST00000277225.10	10345	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	7.99826370046789	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGCATCTGTTGTAA	17	True	NA	9	True	AATAAA	-19	NA	106863165	107013634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_106863356_106923353_106923604_106924132_106929760_106930524_106930690_106932445_106932550_106935502_106935622_106938915_106939108_106972004_106972273_106974136_106974274_106984185_106984410_107003293_107003427_107009544_107009669_107010822
transcript_181126.known	chr9	+	4114	10	FSM	ENSG00000119318.13	ENST00000358015.8	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	16.4384373412506	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	5	True	NA	8	True	TATAAA	-15	NA	107283278	107332189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
transcript_18113.known	chr1	-	2011	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_11	21.3369469728555	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-7	True	NA	-4	True	AATAAA	-19	NA	206612465	206591641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_181130.nic	chr9	+	1944	9	ISM	ENSG00000119318.13	ENST00000358015.8	4114	10	-140	6848	2	-6848	5prime_fragment	FALSE	canonical	3	97	junction_2	16.9705627484771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTAGTCACACTAGCCC	NA	False	NA	NA	False	NA	NA	NA	107283138	107325341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833
transcript_181139.known	chr9	-	5913	37	FSM	ENSG00000070061.16	ENST00000374647.10	5913	37	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_36	34.961387431152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTTTCCTGGAC	-24	True	NA	NA	False	AGTAAA	-16	NA	108934124	108867516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_181140.known	chr9	-	5921	37	FSM	ENSG00000070061.16	ENST00000675825.1	5921	37	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	47.4430132492956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAATGTGTTTATTGA	-13	True	NA	NA	False	NA	NA	NA	108934113	108867539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881662_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_181141.known	chr9	-	5951	37	FSM	ENSG00000070061.16	ENST00000674948.1	5951	37	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_36	37.8482186413177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATGTGTTTATTGATA	56	False	NA	NA	False	AATAGA	-1	NA	108934328	108867537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
transcript_181143.known	chr9	-	7210	35	FSM	ENSG00000070061.16	ENST00000675748.1	7210	35	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_34	38.1563098220826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATGTGTTTATTGATA	4	True	NA	NA	False	AATAGA	-1	NA	108934096	108867537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
transcript_181147.known	chr9	-	2522	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	178.351781669518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTGTGATTTTTAAAA	-1	True	NA	0	True	AATAAA	-26	NA	109013522	108942568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_181151.known	chr9	-	2454	19	FSM	ENSG00000119326.15	ENST00000325551.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_11	65.9140854951858	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAATTGTAGTGTGAT	22	True	NA	-8	True	AATAAA	-18	NA	109013499	108942576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_181158.known	chr9	+	1901	6	FSM	ENSG00000119328.12	ENST00000322940.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	11.6550418274668	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	-46	True	NA	NA	False	AATAAA	-19	NA	108934399	108940954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108939195_108939273_108939384_108939455_108939548
transcript_181159.nnic	chr9	+	1745	5	NIC	ENSG00000119328.12	novel	1901	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	78.8289287000654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	-20	True	NA	NA	False	AATAAA	-19	NA	108934425	108940954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_108934566_108935637_108935690_108939195_108939273_108939384_108939455_108939548
transcript_181160.nic	chr9	-	780	4	ISM	ENSG00000119326.15	ENST00000374595.8	2522	19	-60	48156	-60	1171	5prime_fragment	FALSE	canonical	3	718	junction_2	55.4817287241685	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTCATCACATTTTA	NA	False	NA	-3	True	AATGAA	-41	NA	109013582	108990724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_108990846_108992631_108992820_108999066_108999257_109013301
transcript_181162.known	chr9	+	561	2	FSM	ENSG00000119328.12	ENST00000466200.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGACCTCTGGTACTCTT	-3	True	NA	NA	False	NA	NA	NA	108934442	108936075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_108934566_108935637
transcript_181165.nic	chr9	-	442	2	ISM	ENSG00000119326.15	ENST00000374593.4	761	4	-70	7200	-60	-7200	5prime_fragment	FALSE	canonical	3	850	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTGTATTGAAGCTA	NA	False	NA	NA	False	AATAAA	-1	NA	109013582	108999095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_108999257_109013301
transcript_181168.known	chr9	-	7999	18	FSM	ENSG00000106771.13	ENST00000374586.8	7999	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	92.5459952978774	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGTGTGTTGAAAAAC	-2	True	NA	2	True	AATAAA	-37	NA	109119947	109015134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109085996_109086021_109087172_109087343_109090921_109091156_109093474_109093592_109106507_109106610_109108452_109108571_109119334
transcript_181176.known	chr9	-	4006	16	FSM	ENSG00000095203.15	ENST00000374557.4	4006	16	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	24.1765726823855	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGAGTGGTTTCAGT	44	True	NA	-4	True	AATAAA	-17	NA	109320964	109239730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_109241810_109243617_109243683_109247755_109247790_109251480_109251512_109253440_109253551_109255510_109255681_109255773_109255844_109256135_109256225_109256392_109256481_109258176_109258298_109263049_109263103_109264979_109265025_109267472_109267552_109268390_109268434_109279816_109279922_109320140
transcript_181184.known	chr9	+	6866	4	FSM	ENSG00000157654.19	ENST00000374525.5	6866	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	19.6015872373189	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	2	True	NA	NA	False	ATTAAA	-28	NA	110048695	110172512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110168398
transcript_181190.known	chr9	+	3101	4	FSM	ENSG00000157654.19	ENST00000259318.7	3101	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	24.7161665492222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGAACTGAGACCAGCCT	-26	True	NA	NA	False	AAAACA	-31	NA	110125500	110168811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_110125597_110136126_110138540_110156318_110156498_110168398
transcript_181191.nic	chr9	+	2892	3	NIC	ENSG00000157654.19	novel	6866	4	NA	NA	23	9	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	24.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGATGAAAATGAAACGAAAA	NA	False	NA	NA	False	AATATA	-4	NA	110048620	110168642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_110048856_110136126_110138540_110168398
transcript_181195.known	chr9	-	737	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	3	7787	junction_4	185.028376202138	1909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTGACAGAGAAAATAG	0	True	NA	NA	False	AATAAA	-22	NA	110256507	110243809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
transcript_181197.known	chr9	-	635	4	FSM	ENSG00000136810.13	ENST00000374515.9	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3793.19569170318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTTGACAGAGAAAATA	1572	False	NA	NA	False	AATAAA	-21	NA	110256466	110243810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_110244220_110244777_110244844_110251357_110251463_110256411
transcript_181198.known	chr9	-	3637	5	FSM	ENSG00000198121.15	ENST00000374431.7	3637	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	11.0538454847171	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTGGTAATGTGTGGTT	-1	True	NA	-9	True	AATAAA	-14	NA	111038043	110873262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_110875723_110941420_110942169_110972072_110972221_110973480_110973559_111037840
transcript_181200.known	chr9	-	7078	49	FSM	ENSG00000136813.15	ENST00000338205.9	7078	49	0	0	0	0	multi-exon	TRUE	canonical	3	275	junction_48	71.0122953702385	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAACATGTGTGTTTGT	18	True	NA	-5	True	AATAAA	-21	NA	111484357	111360691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111484115
transcript_181204.known	chr9	-	1941	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	394.58073951981	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGCCGGGCGTGGTGGCT	NA	False	NA	-11	True	AATAAA	-24	NA	111599893	111562576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_181206.known	chr9	-	1599	10	FSM	ENSG00000106853.20	ENST00000407693.7	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_9	153.140297169896	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCCTGTA	0	True	NA	-1	True	AATAAA	-34	NA	111599647	111562566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_181213.known	chr9	-	1061	4	FSM	ENSG00000106853.20	ENST00000374313.5	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	215.134583200584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACACAGTCTTTCCAT	19	True	NA	NA	False	AATATA	-37	NA	111599816	111592297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599602
transcript_181216.known	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_9	292.361183689619	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	5	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_181218.known	chr9	+	2498	5	FSM	ENSG00000059769.20	ENST00000447096.1	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	26.8456234794426	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGATATGACGTTTT	-6	True	NA	NA	False	AATAAA	-21	NA	111631359	111654351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111631744_111642856_111643095_111647106_111647260_111649452_111649924_111653099
transcript_181221.known	chr9	+	2280	4	FSM	ENSG00000059769.20	ENST00000313525.4	2280	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	22.8083805260747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGTTTGTTGATATGA	6	True	NA	NA	False	AATAAA	-15	NA	111631333	111654345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111631744_111647106_111647260_111649452_111649924_111653099
transcript_181224.nic	chr9	+	903	4	ISM	ENSG00000059769.20	ENST00000447096.1	2498	5	9	4762	9	-4756	5prime_fragment	FALSE	canonical	3	41	junction_1	29.044027881056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAAAGAAGAAATTCGTG	3	True	NA	NA	False	AAAAAG	-26	NA	111631368	111649589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_111631744_111642856_111643095_111647106_111647260_111649452
transcript_181226.nic	chr9	+	727	3	ISM	ENSG00000059769.20	ENST00000313525.4	2280	4	-27	4756	-27	-4756	5prime_fragment	FALSE	canonical	3	52	junction_1	27.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAAAGAAGAAATTCGTG	-21	True	NA	NA	False	AAAAAG	-26	NA	111631306	111649589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_111631744_111647106_111647260_111649452
transcript_181227.known	chr9	+	1201	3	FSM	ENSG00000242616.4	ENST00000374293.5	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_2	121	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTCTATGACAGCAA	14	True	NA	15	True	AATAAA	-17	NA	111661604	111670226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111661716_111666814_111666947_111669268
transcript_181229.nic	chr9	+	1114	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-52	-136	combination_of_known_splicesites	FALSE	canonical	3	202	junction_2	198.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTTAACTTCACAAGT	158	False	NA	NA	False	ATTAAA	-30	NA	111661552	111670090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_181230.nic	chr9	+	1253	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-52	3	combination_of_known_splicesites	FALSE	canonical	3	202	junction_2	198.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGACAGCAATAT	158	False	NA	18	True	AATAAA	-20	NA	111661552	111670229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_181232.known	chr9	+	3959	9	FSM	ENSG00000148154.10	ENST00000374279.4	3959	9	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_7	23.3127513391277	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGCAATAGTGTATTTT	0	True	NA	15	True	AATAAA	-20	NA	111896813	111935369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
transcript_181236.known	chr9	-	2754	18	FSM	ENSG00000106868.17	ENST00000374264.6	2754	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.15252524191549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAATCCATTCTTTACA	4	True	NA	-5	True	TATAAA	-19	NA	112175267	112041078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112041493_112041866_112041961_112042100_112042166_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
transcript_181237.known	chr9	-	3015	17	FSM	ENSG00000106868.17	ENST00000374270.8	3015	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	3.04138126514911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTCTTCCCTTGGTTA	32	True	NA	-1	True	AGTAAA	-17	NA	112175297	112040782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112041493_112041866_112041961_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
transcript_181240.known	chr9	-	7192	14	FSM	ENSG00000119314.16	ENST00000374257.6	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_12	52.1279717981333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	8	True	NA	-2	True	AATAAA	-28	NA	112333619	112218434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112333469
transcript_181246.nic	chr9	-	1855	14	NIC	ENSG00000119314.16	novel	3413	15	NA	NA	-19	-1127	combination_of_known_junctions	FALSE	canonical	3	72	junction_12	63.6376577137306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAGCTCAAGACCAAT	-17	True	NA	-17	True	AGTAAA	-17	NA	112333644	112223787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297840_112297917_112333469
transcript_181247.known	chr9	-	2755	13	FSM	ENSG00000119314.16	ENST00000343327.6	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	70.6768860535198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTTTTCAATAAGTAA	3	True	NA	NA	False	TTTAAA	-21	NA	112333578	112222660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297831_112297917_112333469
transcript_181252.known	chr9	+	7650	5	FSM	ENSG00000165185.15	ENST00000536272.5	7650	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	52.2894587847302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGTGTTACGTGCTTT	8	False	NA	25	True	AATAAA	-27	NA	112486967	112665309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112487119_112574056_112575252_112617870_112617955_112645649_112645823_112659262
transcript_181253.known	chr9	+	11795	4	FSM	ENSG00000165185.15	ENST00000337530.11	11795	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	20.4613456709637	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTTCTTAGCTTA	-27	True	NA	7	True	AATAAA	-16	NA	112486826	112669397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112487119_112574056_112575252_112645649_112645823_112659262
transcript_181257.known	chr9	+	2643	3	FSM	ENSG00000165185.15	ENST00000374244.3	2643	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	56.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACTGTCAAAAAGG	13	False	NA	NA	False	NA	NA	NA	112487014	112619214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112487119_112574056_112575252_112617870
transcript_18126.nnic	chr1	-	1947	14	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-86	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	47.6862279003167	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-1	True	NA	-4	True	AATAAA	-19	NA	206612551	206591641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_181261.known	chr9	+	3174	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_7	12.1692234756372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	6	True	NA	12	True	AATAAA	-18	NA	112380107	112472405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_181271.known	chr9	+	2983	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	45.7902828119679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	60	False	NA	12	True	AATAAA	-18	NA	112380079	112472405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_181275.known	chr9	-	4114	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	19.1898410623955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTCCTGAACAAT	-33	True	NA	-14	True	AATAAA	-31	NA	112718117	112683925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
transcript_18128.known	chr1	-	1633	13	FSM	ENSG00000143486.16	ENST00000367114.7	1633	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	55.2981816056269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-1	True	NA	-4	True	AATAAA	-19	NA	206612459	206591641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_181281.known	chr9	-	874	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	78.7922726047562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	NA	False	NA	NA	False	AATGAA	-27	NA	112718149	112687116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
transcript_181288.known	chr9	-	2414	5	FSM	ENSG00000228623.7	ENST00000638622.1	2414	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	6.97764286847643	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGGGAAAGCCTGCA	NA	False	NA	85	True	NA	NA	NA	113012227	112997119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
transcript_181292.known	chr9	-	8807	28	FSM	ENSG00000119321.10	ENST00000446284.6	8807	28	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	8.29563489427059	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGCTTATTAGAGCTG	-12	True	NA	-1	True	AATAAA	-18	NA	113221318	113161005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113166156_113168459_113168557_113169223_113169943_113170521_113170630_113171580_113171707_113173452_113173606_113174427_113174584_113176536_113176674_113178629_113178802_113182765_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_181293.nnic	chr9	-	4345	28	NNC	ENSG00000119321.10	novel	8807	28	NA	NA	0	871	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	12.8278674694371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACCCAAGCCCTTGGAG	-5	True	NA	-39	True	AATAAA	-26	NA	113221398	113165523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_113166156_113168459_113168557_113169223_113169943_113170521_113170630_113171580_113171707_113173452_113173606_113174427_113174584_113176536_113176674_113178629_113178802_113182789_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_181300.nic	chr9	-	2084	20	ISM	ENSG00000119321.10	ENST00000446284.6	8807	28	-15	17716	-15	5570	5prime_fragment	FALSE	canonical	3	37	junction_3	7.89298226116525	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACAGAGCTGCAGATGC	60	False	NA	NA	False	NA	NA	NA	113221333	113178721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_113178802_113182765_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_181303.known	chr9	+	1723	4	FSM	ENSG00000136867.11	ENST00000259392.8	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTTCTGTTCTCCT	2	True	NA	17	True	ATTAAA	-44	NA	113151006	113164140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113151081_113157726_113157794_113161508_113161699_113162748
transcript_181304.known	chr9	-	2815	14	FSM	ENSG00000119321.10	ENST00000414250.2	2815	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	7.45876237017071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGAAAAATGTGAACAAA	-12	True	NA	NA	False	NA	NA	NA	113221318	113186435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_181306.known	chr9	+	4762	5	FSM	ENSG00000136868.11	ENST00000374212.5	4762	5	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_4	54.5825063550585	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	-21	True	NA	25	True	AATAAA	-22	NA	113221543	113264492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113221679_113256113_113256278_113257112_113257186_113258693_113258863_113260271
transcript_181316.nnic	chr9	-	843	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_3	510.248523325208	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	6	True	NA	-56	True	AATAAA	-33	NA	113275572	113266991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275381
transcript_181317.nnic	chr9	-	762	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	547.947888844267	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	6	True	NA	-56	True	AATAAA	-33	NA	113275572	113266991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275462
transcript_181318.nnic	chr9	-	840	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	160	0	at_least_one_novel_splicesite	FALSE	canonical	2	122	junction_3	490.457156357436	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	189	False	NA	-56	True	AATAAA	-33	NA	113275389	113266991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_113267440_113272426_113272549_113273328_113273439_113275229
transcript_181319.known	chr9	-	871	4	FSM	ENSG00000176386.9	ENST00000374206.4	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_3	167.453476125958	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	6	True	NA	-56	True	AATAAA	-33	NA	113275572	113266991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113267440_113272426_113272549_113273328_113273439_113275381
transcript_181320.known	chr9	+	475	2	FSM	ENSG00000136868.11	ENST00000496650.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTTCTAGTTTCTG	22	True	NA	NA	False	AATAAA	-16	NA	113221586	113227660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113221679_113227277
transcript_181327.known	chr9	+	2897	14	FSM	ENSG00000136875.13	ENST00000374198.5	2897	14	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	24.0352305520939	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGTCCATAGAGGTC	-13	True	NA	54	True	TATAAA	-38	NA	113275657	113292905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_181341.known	chr9	-	4871	11	FSM	ENSG00000148225.16	ENST00000374193.9	4871	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.51327459504216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTGATGTCAAATT	20	False	NA	0	True	AATAAA	-20	NA	113340275	113313221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113316910_113318474_113318638_113320356_113320499_113321510_113321579_113322810_113322912_113323010_113323156_113328880_113328956_113330983_113331117_113331906_113332051_113336287_113336441_113340216
transcript_181342.known	chr9	-	2255	10	FSM	ENSG00000148225.16	ENST00000465205.2	2255	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.5475986974649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	5	True	NA	NA	False	NA	NA	NA	113340254	113315683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113316910_113318474_113318638_113320356_113320499_113321510_113321579_113322810_113322912_113323010_113323156_113328880_113328956_113331906_113332051_113336287_113336441_113340216
transcript_181346.known	chr9	+	2328	6	FSM	ENSG00000119411.11	ENST00000374183.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	16.3413585726524	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATTTATTCCATGTT	-11	True	NA	15	True	ATTAAA	-14	NA	113349540	113371222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258_113368384_113369615
transcript_181349.nic	chr9	+	1096	5	ISM	ENSG00000119411.11	ENST00000374183.5	2328	6	-17	2481	-17	-2481	5prime_fragment	FALSE	canonical	3	134	junction_3	15.0228991875736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAATCAAACTGCCTGAT	-28	True	NA	17	True	GATAAA	-30	NA	113349523	113368741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258
transcript_181350.nic	chr9	+	3568	5	ISM	ENSG00000119411.11	ENST00000374183.5	2328	6	-17	9	-17	-9	intron_retention	FALSE	canonical	3	134	junction_3	15.0228991875736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGCATTGAAGATTTA	-28	True	NA	6	True	ATTAAA	-5	NA	113349523	113371213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258
transcript_181351.known	chr9	+	2213	5	FSM	ENSG00000119411.11	ENST00000462085.1	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	61.1023731126705	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTTCTTTGTTGATA	-10	True	NA	26	True	ATTAAA	-25	NA	113349541	113371233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113369615
transcript_181360.known	chr9	-	1834	2	FSM	ENSG00000119431.10	ENST00000238379.9	1834	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTAGCCTCTGCCCTCC	810	False	NA	-6	True	AATAAA	-40	NA	113376175	113373418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113374530_113375452
transcript_181361.known	chr9	-	1481	3	FSM	ENSG00000119431.10	ENST00000374180.4	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCCTAGCCTCTGCCC	-1	True	NA	-9	True	AATAAA	-37	NA	113376986	113373421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113374530_113375452_113375568_113376728
transcript_181362.known	chr9	-	3129	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	16.856712619327	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTGAATGTCTTGT	-2	True	NA	-10	True	AATAAA	-43	NA	113401284	113386311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_181363.known	chr9	-	3247	12	FSM	ENSG00000148218.16	ENST00000482847.5	3247	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	35.4230629453433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTTCTACTGAAT	9431	False	NA	-17	True	AATAAA	-36	NA	113401243	113386318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392336_113393446_113393635_113401211
transcript_181368.nic	chr9	-	3245	11	NIC	ENSG00000148218.16	novel	3129	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	109	junction_6	9.89141041510259	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTTCTACTGAAT	-4	True	NA	-17	True	AATAAA	-36	NA	113401286	113386318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_18137.known	chr1	+	3799	6	FSM	ENSG00000266094.8	ENST00000579436.7	3799	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.18747549010185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTAGGCGGGAGGGCGCT	1	True	NA	NA	False	AATGAA	-38	NA	206507530	206589448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206508060_206538171_206538294_206583268_206583380_206584386_206584685_206585179_206585296_206586825
transcript_181371.nic	chr9	-	2141	11	NIC	ENSG00000148218.16	novel	3129	12	NA	NA	-58	-1166	intron_retention	FALSE	canonical	3	109	junction_6	9.89141041510259	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTTACAAATTGTGATAA	9326	False	NA	NA	False	AATAAA	-1	NA	113401348	113387484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_181374.known	chr9	-	547	2	FSM	ENSG00000148218.16	ENST00000494848.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTAAAGTGCTATGTAC	-2	True	NA	NA	False	NA	NA	NA	113401284	113393160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113393635_113401211
transcript_181376.known	chr9	-	2194	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	173.691357010071	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-1	True	NA	-16	True	AATAAA	-16	NA	113410675	113407234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
transcript_181377.known	chr9	-	2396	3	FSM	ENSG00000148229.13	ENST00000479871.1	2396	3	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	19	True	NA	-16	True	AATAAA	-16	NA	113410343	113407234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113408984_113409609_113410141_113410227
transcript_181378.nic	chr9	+	4127	23	NIC	ENSG00000138835.22	novel	4211	23	NA	NA	-16	0	intron_retention	FALSE	canonical	3	10	junction_5	23.6917620023682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	4	True	NA	11	True	AATAAA	-18	NA	113463712	113597729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024_113498081_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332_113591398_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_18138.known	chr1	+	3496	5	FSM	ENSG00000266094.8	ENST00000577571.5	3496	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.7169905660283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGACTCATGTTAGAA	1	True	NA	19	True	AATAAA	-11	NA	206557164	206589267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206557694_206583268_206583380_206584386_206584685_206585179_206585296_206586825
transcript_181384.nic	chr9	+	4491	19	NIC	ENSG00000138835.22	novel	4211	23	NA	NA	-67	0	intron_retention	FALSE	canonical	3	10	junction_5	6.47216261298253	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAGTTACATGGCAAGAA	NA	False	NA	10	True	AATAAA	-16	NA	113463661	113593003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024_113498081_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332
transcript_181385.known	chr9	+	2542	18	FSM	ENSG00000138835.22	ENST00000317613.10	2542	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_17	7.59302174623215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACTTAGAGTGCTGT	-3	True	NA	NA	False	AAGAAA	-24	NA	113463731	113542089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024_113498081_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113541319
transcript_181389.known	chr9	+	3689	16	FSM	ENSG00000138835.22	ENST00000343817.9	3689	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.7498701969852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTGTGTGTTCCTGG	59	False	NA	20	True	AATAAA	-27	NA	113501426	113597738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113501631_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332_113591398_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_181392.nic	chr9	+	4068	12	ISM	ENSG00000138835.22	ENST00000343817.9	3689	16	-75	4735	-19	0	5prime_fragment	FALSE	canonical	3	8	junction_1	7.08157894332743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAGTTACATGGCAAGAA	NA	False	NA	10	True	AATAAA	-16	NA	113501351	113593003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_113501631_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332
transcript_181397.nnic	chr9	+	3125	7	NIC	ENSG00000138835.22	novel	4158	6	NA	NA	-12	0	intron_retention	FALSE	canonical	1	2	junction_1	39.2923515316771	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	NA	False	NA	11	True	AATAAA	-18	NA	113564941	113597729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113565731_113583449_113584428_113591332_113591398_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_181398.known	chr9	+	1503	5	FSM	ENSG00000138835.22	ENST00000620489.1	1503	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	10.7325439668328	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	-13	True	NA	11	True	AATAAA	-18	NA	113594128	113597729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_18140.known	chr1	+	8128	3	FSM	ENSG00000143479.18	ENST00000367109.8	8128	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGCATCCTGATTGT	-9	True	NA	17	True	AATAAA	-19	NA	206635535	206655158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206635781_206637649_206637762_206647387
transcript_181414.known	chr9	+	3018	15	FSM	ENSG00000157657.15	ENST00000374126.10	9363	15	-27	6372	0	0	multi-exon	FALSE	canonical	2	3	junction_11	10.2899296917532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACAACACTGTCACAAA	NA	False	NA	74	True	AAAAAG	-29	NA	113876281	114050221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_113998258_113998355_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032644_114032729_114036299_114036378_114047892_114047995_114048650
transcript_181418.nic	chr9	+	2972	15	NIC	ENSG00000157657.15	novel	9363	15	NA	NA	-54	-64	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	9.15094508334343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTTAAGACTTGACTT	NA	False	NA	10	True	AATAAA	-21	NA	113876227	114050157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016112_114016173_114016694_114016785_114028732_114028973_114032644_114032729_114036299_114036378_114047892_114047995_114048650
transcript_18142.known	chr1	-	5501	4	FSM	ENSG00000182795.13	ENST00000359470.6	5501	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.69967317119759	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGTCTTATTTTTTT	7	True	NA	-2	True	AATAAA	-13	NA	207032756	207018521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_207023481_207024886_207025065_207027493_207027680_207032578
transcript_181428.nic	chr9	+	2705	14	NIC	ENSG00000157657.15	novel	9363	15	NA	NA	6	-64	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	9.3713651730738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTTAAGACTTGACTT	-18	True	NA	10	True	AATAAA	-21	NA	113876287	114050157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_113998258_113998355_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_181432.known	chr9	+	9109	14	FSM	ENSG00000157657.15	ENST00000288466.11	9109	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	7.71995033248885	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	NA	False	NA	12	True	AATAAA	-13	NA	113876281	114056591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016112_114016173_114016694_114016785_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_181435.nic	chr9	+	2912	14	NIC	ENSG00000157657.15	novel	9363	15	NA	NA	-54	-64	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	8.49991298249924	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTTAAGACTTGACTT	NA	False	NA	10	True	AATAAA	-21	NA	113876227	114050157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032644_114032729_114036299_114036378_114047892_114047995_114048650
transcript_181437.known	chr9	+	9289	14	FSM	ENSG00000157657.15	ENST00000615615.4	9289	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	7.47777772893215	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	NA	False	NA	12	True	AATAAA	-13	NA	113876281	114056591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_181449.nic	chr9	+	2669	13	NIC	ENSG00000157657.15	novel	9289	14	NA	NA	-54	-64	combination_of_known_junctions	TRUE	canonical	3	14	junction_9	6.36177822799744	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTTAAGACTTGACTT	NA	False	NA	10	True	AATAAA	-21	NA	113876227	114050157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_181460.known	chr9	-	1262	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_4	2.11403306560449	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-2	True	NA	3	True	AATAAA	-24	NA	114078300	114060126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
transcript_181464.nic	chr9	-	2037	14	NIC	ENSG00000136883.16	novel	2195	19	NA	NA	-547	0	intron_retention	FALSE	canonical	3	11	junction_1	5.67877810008977	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGGTTCTATCCTC	807	False	NA	-17	True	AATAAA	-19	NA	114098483	114091637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_114092001_114092332_114092452_114092541_114092643_114093228_114093334_114093406_114093498_114093885_114093973_114094180_114094272_114094352_114094456_114095022_114095128_114095213_114095333_114096050_114096208_114096386_114096479_114097606_114097742_114098114
transcript_18147.known	chr1	+	7073	15	FSM	ENSG00000123836.15	ENST00000367080.8	7073	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	13.5075564641668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGCTTCTGGGTTTT	9	True	NA	20	True	AATAAA	-23	NA	207053274	207077817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207072203
transcript_181485.nnic	chr9	-	5504	23	NNC	ENSG00000106948.17	novel	7380	22	NA	NA	-3576	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.15944973094904	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCCGTGTCTCTGCTGT	499	False	NA	-6	True	AAAAAG	-27	NA	114397981	114336130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114394356_114394411_114397887
transcript_181488.known	chr9	-	7454	22	FSM	ENSG00000106948.17	ENST00000374088.8	7454	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.15814651307136	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGGTTTAATTGA	0	True	NA	NA	False	TATAAA	-28	NA	114387982	114334155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114387859
transcript_18149.known	chr1	+	3494	15	FSM	ENSG00000123836.15	ENST00000367079.3	3494	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	10.2807527716126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAATTAATTTTTAAG	45	False	NA	NA	False	AATAAA	-16	NA	207053310	207081024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207078953
transcript_1815.nnic	chr1	-	1145	5	NNC	ENSG00000162591.16	novel	7443	37	NA	NA	-9	-62734	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	18.0468141232739	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCATCCTGCCTGTACT	21	False	NA	NA	False	ATTAAA	-40	NA	3611517	3555461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_3555877_3579824_3579930_3595337_3595448_3602465_3602601_3611137
transcript_181502.known	chr9	-	3334	11	FSM	ENSG00000106948.17	ENST00000312033.3	3334	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.19317121994613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	9873	False	NA	NA	False	NA	NA	NA	114388081	114359086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114387859
transcript_181503.known	chr9	-	2138	8	FSM	ENSG00000106948.17	ENST00000374079.8	2138	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.38190457150472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTGTCTCTGCTGTATG	NA	False	NA	-3	True	AAAAAG	-30	NA	114348999	114336127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114348886
transcript_181505.nic	chr9	-	4010	13	NIC	ENSG00000095397.16	novel	4070	12	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	9.1469484893415	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGTCAGCGTGCTGTGTG	17	False	NA	-8	True	AATAAA	-18	NA	114505557	114402080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183_114505052_114505194
transcript_181508.known	chr9	-	4070	12	FSM	ENSG00000095397.16	ENST00000362057.4	4070	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	9.12357766566864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCAGCGTGCTGTGTGG	22	True	NA	-7	True	AATAAA	-19	NA	114505473	114402079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183
transcript_181509.nnic	chr9	-	3884	12	NIC	ENSG00000095397.16	novel	4070	12	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_9	11.9641337282633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGTCAGCGTGCTGTGTG	17	False	NA	-8	True	AATAAA	-18	NA	114505557	114402080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114478552_114478772_114504183_114505052_114505194
transcript_18152.known	chr1	-	6396	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTATATTTTGGGA	0	True	NA	-10	True	AATAAA	-15	NA	207051208	207043848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_207049724_207050687
transcript_181532.nic	chr9	-	1682	3	NIC	ENSG00000095397.16	novel	1718	2	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTGATTGGCTT	17	False	NA	NA	False	AATAAA	-18	NA	114505557	114478320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_114478772_114504183_114505052_114505194
transcript_181533.known	chr9	-	1718	2	FSM	ENSG00000095397.16	ENST00000374057.3	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTGATTGGCTT	-3	True	NA	NA	False	AATAAA	-18	NA	114505450	114478320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114478772_114504183
transcript_181534.known	chr9	+	1563	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_1	63.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	-12	True	NA	21	True	AATACA	-32	NA	114587768	114598879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114587921_114592551_114592653_114597569
transcript_181536.known	chr9	+	1136	3	FSM	ENSG00000136888.8	ENST00000677115.1	1136	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1321.5	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTCCCTGTCT	131	False	NA	30	True	AGTAAA	-26	NA	114587705	114598384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114587921_114592551_114592658_114597569
transcript_181537.known	chr9	+	978	2	FSM	ENSG00000136888.8	ENST00000677452.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATTCTTTTTTTTTTCC	-29	True	NA	24	True	AGTAAA	-20	NA	114587751	114598378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114587921_114597569
transcript_181539.known	chr9	+	4490	9	FSM	ENSG00000157693.15	ENST00000288502.9	4490	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	13.6605042000652	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTCGCATATTGT	-24	True	NA	16	True	AATAAA	-16	NA	114611290	114646422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114611565_114617117_114617302_114624349_114624460_114626898_114627007_114628100_114628251_114633767_114633879_114636989_114637071_114638543_114638727_114643133
transcript_18154.known	chr1	+	2220	11	FSM	ENSG00000196352.17	ENST00000314754.12	2220	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	45.4520626594657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTAGTATGTGAAATT	20	False	NA	4	True	AATAAA	-18	NA	207321700	207360501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390_207340509_207359545
transcript_181546.nic	chr9	-	5740	21	NIC	ENSG00000041982.16	novel	7508	24	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	26.6763472012193	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAATAAAAGCACAAGTAC	770	False	NA	-44	True	AAAACA	-32	NA	115118293	115020559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561_115091155_115117981
transcript_18155.known	chr1	+	1691	10	FSM	ENSG00000196352.17	ENST00000367063.6	1691	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	37.1513421321791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGATATATTGGTTT	297	False	NA	6	True	AATAAA	-17	NA	207321531	207340766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390
transcript_181552.nic	chr9	-	2676	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-36	634	intron_retention	FALSE	canonical	3	33	junction_7	11.246768243294	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAATTTGCTCCAGGAA	-33	True	NA	NA	False	NA	NA	NA	116687270	116424593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_181553.nic	chr9	-	2273	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-267	0	intron_retention	FALSE	canonical	3	33	junction_7	11.246768243294	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	NA	False	NA	-6	True	ATTAAA	-18	NA	116687501	116425227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_181554.nic	chr9	-	1650	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-29	-23	intron_retention	FALSE	canonical	3	33	junction_7	11.246768243294	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAAAGTCTCTCCTTTT	-26	True	NA	-8	True	NA	NA	NA	116687263	116425612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_181556.known	chr9	-	1757	9	FSM	ENSG00000148219.18	ENST00000341734.8	1757	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.079529376955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	3	True	NA	-6	True	ATTAAA	-18	NA	116687234	116425227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_116425627_116425875_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_181557.known	chr9	+	3688	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTCTTTTCATC	1	True	NA	15	True	ATTAAA	-16	NA	116687329	116701300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_116687382_116697664
transcript_181559.known	chr9	+	3715	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	-24	True	NA	14	True	ATTAAA	-15	NA	116687304	116701299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_116687382_116697661
transcript_18156.known	chr1	+	2590	10	FSM	ENSG00000196352.17	ENST00000367064.9	2590	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	13.3620062070238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTTATCACAACTAGC	-3	True	NA	17	True	AATAAA	-19	NA	207321677	207360966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207359545
transcript_181564.known	chr9	-	3171	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	7.88695642390986	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTTATGCTTAATT	6	True	NA	-20	True	GATAAA	-27	NA	119369435	119166628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_181570.nnic	chr9	-	2626	7	NIC	ENSG00000078725.13	novel	3171	8	NA	NA	-67	-375	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.2245502764911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACAAAAATTTGTAAAAT	NA	False	NA	-22	True	AATGAA	-20	NA	119369502	119167003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_119168225_119208718_119208942_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_181572.known	chr9	-	6232	38	FSM	ENSG00000136861.19	ENST00000349780.9	6232	38	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_33	38.3698125195192	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACGATTCTGTTGTTT	-10	True	NA	-7	True	ATTAAA	-18	NA	120580167	120388874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_181575.known	chr9	-	5985	37	FSM	ENSG00000136861.19	ENST00000360190.8	5985	37	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	40.8720054968353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACGATTCTGTTGTT	-1	True	NA	-8	True	ATTAAA	-17	NA	120580158	120388875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_181584.known	chr9	-	970	11	FSM	ENSG00000136861.19	ENST00000472883.2	970	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.411182153938	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGGAAAGAGAAATTG	96	False	NA	-18	True	NA	NA	NA	120580061	120527905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120527926_120528743_120528774_120528892_120528905_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_181589.nic	chr9	-	1000	8	ISM	ENSG00000136861.19	ENST00000472883.2	970	11	-108	2088	1	-2088	5prime_fragment	FALSE	canonical	3	48	junction_3	13.1413042560859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAGAAACTGAGGTGA	-12	True	NA	NA	False	AAGAAA	-2	NA	120580169	120529993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_181594.nic	chr9	-	1880	8	ISM	ENSG00000119402.18	ENST00000684405.1	8325	9	-64	11114	-30	-1742	5prime_fragment	FALSE	canonical	3	50	junction_6	70.7202017727291	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTTTTTTCTTTTGAA	NA	False	NA	-28	True	ATTAAA	-12	NA	120793446	120764173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148_120793258_120793353
transcript_181596.known	chr9	-	9142	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	48.4220391717555	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCGTTGAAGTGTTCT	-11	True	NA	-3	True	NA	NA	NA	120793416	120756973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
transcript_181602.known	chr9	-	3381	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_6	34.24097610239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACTGCCTATTA	11	True	NA	NA	False	AATAAA	-35	NA	120842922	120816052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_181605.known	chr9	-	1538	9	FSM	ENSG00000095261.14	ENST00000373904.5	1538	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.4161782373627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCAGATGTTACTTT	-18	True	NA	NA	False	NA	NA	NA	120842951	120817795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831831_120831946_120833311_120833457_120842736
transcript_181608.nic	chr9	-	1347	5	ISM	ENSG00000095261.14	ENST00000210313.8	3381	10	-8	12391	-8	-1849	5prime_fragment	FALSE	canonical	3	211	junction_1	49.7795138586146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGAGCTTTTCAAAAT	3	True	NA	NA	False	NA	NA	NA	120842930	120828443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_181609.known	chr9	-	567	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGTAAACCCCTTTC	51	False	NA	NA	False	AATAAA	-14	NA	120842882	120831669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120831946_120833311_120833457_120842736
transcript_18161.known	chr1	+	1843	10	NNC	ENSG00000196352.17	novel	2590	10	NA	NA	-15	54	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	38.6190639291715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGGCAGTCCTGGA	52	False	NA	65	True	NA	NA	NA	207321732	207359767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336944_207336946_207337410_207339396_207339418_207359545
transcript_181611.known	chr9	-	4149	15	FSM	ENSG00000119403.15	ENST00000373896.8	4149	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	31.6711418248505	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTTCCCTATAGTGAA	-6	True	NA	22	True	TTTAAA	-20	NA	120877188	120855650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120869181_120869331_120869844_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_181617.known	chr9	-	3525	10	FSM	ENSG00000119403.15	ENST00000419155.5	3525	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	8.93322277432968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCTTCCCTATAGTGA	9547	False	NA	21	True	TTTAAA	-19	NA	120868911	120855651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868807
transcript_181619.known	chr9	-	1092	9	FSM	ENSG00000119403.15	ENST00000487555.5	1092	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	10.6997371463041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGGGGTCCTGAAAACC	9614	False	NA	NA	False	NA	NA	NA	120868844	120857929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868807
transcript_181621.known	chr9	-	836	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	8.4372685153431	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	-6	True	NA	-35	True	AATAAA	-27	NA	120877188	120869586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_181622.known	chr9	-	4303	9	FSM	ENSG00000056558.11	ENST00000540010.1	4303	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	4.54835134966506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGATGTGACATTGCAT	-4	True	NA	-2	True	NA	NA	NA	120929173	120902392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549_120926689_120929113
transcript_181623.known	chr9	-	4351	8	FSM	ENSG00000056558.11	ENST00000373887.8	4351	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	3.53986048381825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGATGTGACATTGCAT	-8	True	NA	-2	True	NA	NA	NA	120926796	120902392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549
transcript_181626.known	chr9	-	5464	41	FSM	ENSG00000106804.8	ENST00000223642.3	5464	41	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_21	10.5952524745756	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCTAAAAAGCCTGTTA	-2	True	NA	-12	True	ATTAAA	-20	NA	121050275	120952334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120952869_120953729_120953869_120957284_120957369_120960247_120960338_120961481_120961566_120962670_120962777_120962892_120962968_120963635_120963739_120969060_120969119_120970169_120970252_120971929_120971993_120974778_120974932_120976699_120976906_120980082_120980255_120981843_120981940_120982654_120982815_120989045_120989122_120989567_120989781_120991190_120991281_120996239_120996301_120997546_120997775_121005918_121006059_121006903_121006978_121008407_121008499_121013872_121014071_121015198_121015262_121016253_121016384_121017361_121017512_121017642_121017853_121019975_121020180_121021508_121021695_121023403_121023520_121025453_121025581_121027159_121027275_121030396_121030488_121032112_121032196_121034802_121034895_121037880_121037952_121043003_121043167_121046190_121046384_121050181
transcript_18163.known	chr1	+	3371	14	FSM	ENSG00000117335.20	ENST00000358170.6	3371	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	294.310507043519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_181630.known	chr9	+	3372	18	ISM	ENSG00000119397.19	ENST00000373850.6	5911	33	8	19496	8	199	intron_retention	FALSE	canonical	3	11	junction_1	9.58625024561879	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAGACACCTTGAAAAA	11	True	NA	NA	False	NA	NA	NA	121121800	121158114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_121121952_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739
transcript_18164.known	chr1	+	3278	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	247.231448017619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_181640.known	chr9	+	2664	19	FSM	ENSG00000148180.21	ENST00000373808.8	2664	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	134.104252793429	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTATCCAAAAATAGCC	263	False	NA	27	True	NA	NA	NA	121268059	121332738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121268220_121281469_121281563_121300055_121300127_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_18165.known	chr1	+	3320	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	247.993223473725	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	-30	True	NA	14	True	AATAAA	-15	NA	207752053	207795504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_181651.known	chr9	+	2595	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	47.2515172492158	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	-7	True	NA	16	True	AATAAA	-17	NA	121268161	121332842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_181657.nic	chr9	+	2571	17	NIC	ENSG00000148180.21	novel	2595	18	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	102.209783503097	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	296	False	NA	16	True	AATAAA	-17	NA	121268092	121332842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_121268220_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_181658.known	chr9	+	2657	17	FSM	ENSG00000148180.21	ENST00000373818.8	2657	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	97.3986652885962	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	NA	False	NA	16	True	AATAAA	-17	NA	121299792	121332842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121300006_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_181667.known	chr9	-	4149	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	13.9532747966569	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCACTGTGCTGCTCT	15	True	NA	NA	False	AATAAA	-19	NA	121201869	121178132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
transcript_181674.known	chr9	-	3145	7	FSM	ENSG00000148175.13	ENST00000286713.7	3145	7	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_3	26.1772802254168	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTGGTTGGCTTCTTC	-4	True	NA	-6	True	NA	NA	NA	121370250	121338986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121341409_121348014_121348150_121349119_121349324_121353219_121353303_121354600_121354674_121356052_121356157_121370126
transcript_18168.known	chr1	+	3233	12	FSM	ENSG00000117335.20	ENST00000354848.5	3233	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_6	147.408523251787	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_181685.known	chr9	+	6784	16	FSM	ENSG00000136848.18	ENST00000408936.7	6784	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	17.816347050454	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGACTCGTGTCTCCATT	NA	False	NA	25	True	ATTAAA	-21	NA	121651593	121785530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121651900_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
transcript_18169.known	chr1	+	3281	12	FSM	ENSG00000117335.20	ENST00000367041.5	3281	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_11	278.243219605076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_181690.known	chr9	-	804	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_3	48.6415460280612	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-11	True	NA	-11	True	ATTAAA	-15	NA	122159779	122144057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
transcript_181692.nnic	chr9	-	651	3	NIC	ENSG00000119421.7	novel	804	4	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	120	junction_2	597	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	17	False	122159807	-11	True	ATTAAA	-15	NA	122159790	122144057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_122144379_122148111_122148278_122159626
transcript_181693.known	chr9	+	1186	9	FSM	ENSG00000148187.18	ENST00000470366.5	1186	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	55.670908022054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGACTTCTCTCCCTCC	8	False	NA	NA	False	NA	NA	NA	122264925	122322678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
transcript_181699.known	chr9	+	9594	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	11.0302614051829	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTTGGTGATTCTTT	5	True	NA	NA	False	ATTAAA	-21	NA	122264881	122331337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_181703.known	chr9	-	4977	6	FSM	ENSG00000119446.14	ENST00000417201.4	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	26.8626134246093	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTCTTAGTCAATGT	-15	True	NA	2	True	AATAAA	-32	NA	122264840	122237621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122261379_122261509_122264714
transcript_181707.nic	chr9	+	1700	2	ISM	ENSG00000148187.18	ENST00000441707.5	858	5	-16	18194	-11	-18194	5prime_fragment	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCCGGCGCAGTGGCT	-6	True	NA	NA	False	AAAAAG	-9	NA	122264870	122267093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_122264939_122265461
transcript_181708.known	chr9	+	2328	11	FSM	ENSG00000095303.17	ENST00000223423.8	2328	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	4.2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGAACAGGTGGGCTGT	31	False	NA	NA	False	NA	NA	NA	122371079	122393178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122371092_122371185_122371273_122377898_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386622_122390197_122390346_122392188
transcript_181709.known	chr9	+	5020	11	FSM	ENSG00000095303.17	ENST00000362012.7	5020	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	3.53411940941446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTATTTGTGGGGG	1	True	NA	3	True	AATAAA	-15	NA	122371023	122395703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122371092_122371185_122371273_122377898_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
transcript_181710.known	chr9	+	2541	11	FSM	ENSG00000095303.17	ENST00000647067.1	2541	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.78434948556227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCTGTTTCTCATGA	2	True	NA	-39	True	NA	NA	NA	122371024	122393254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122371092_122371185_122371273_122377927_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
transcript_181714.known	chr9	-	3017	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	43.5303214884624	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTCACCATGTTGGCC	-9	True	NA	NA	False	NA	NA	NA	122828588	122818096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
transcript_18172.known	chr1	+	3188	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	192.788718549608	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_181722.known	chr9	-	3623	18	FSM	ENSG00000056586.16	ENST00000423239.6	3623	18	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_2	24.1137730030559	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAATCTTGCTCTATCG	28	True	NA	25	True	NA	NA	NA	122905341	122853744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
transcript_181725.known	chr9	-	3081	10	FSM	ENSG00000056586.16	ENST00000335387.9	3081	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	44.7174945741334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTATTATAATTGTTT	8100	False	NA	NA	False	AATAAA	-40	NA	122905215	122873785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122875369_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
transcript_181727.nic	chr9	-	1192	4	ISM	ENSG00000056586.16	ENST00000335387.9	3081	10	-295	16385	-151	0	5prime_fragment	FALSE	canonical	3	143	junction_2	6.18241233033047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTATTGCTGTTT	7805	False	NA	-10	True	ATTAAA	-18	NA	122905510	122890170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_122890546_122892908_122893027_122897278_122897577_122905109
transcript_181728.known	chr9	-	4455	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	-4	True	NA	NA	False	AATAAA	-16	NA	122931512	122915565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122919945_122931436
transcript_181730.known	chr9	+	914	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACCTTGTCCATTTCTG	7727	False	NA	25	True	AATAAA	-27	NA	122939419	122940333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122939400_122940300
transcript_181736.known	chr9	+	4986	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	25.3598107248457	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	-11	True	NA	77	True	ATTAAA	-19	NA	122941019	123104866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
transcript_181738.known	chr9	-	6451	19	FSM	ENSG00000165209.19	ENST00000348403.10	6451	19	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_18	166.4868659781	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAATATTATGGT	-4	True	NA	NA	False	AATAGA	-20	NA	123268586	123121616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236967_123268435
transcript_181743.nic	chr9	-	3232	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-9	331	combination_of_known_junctions	FALSE	canonical	3	486	junction_17	54.2661007313158	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGTTCTTGTGGCCT	-13	True	NA	-3	True	AATAAA	-18	NA	123268595	123124707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_181745.nic	chr9	-	2901	18	NIC	ENSG00000165209.19	novel	2990	19	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	486	junction_17	54.2661007313158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTAGCTTATTATT	-13	True	NA	-14	True	AATAAA	-23	NA	123268595	123125038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_181746.nic	chr9	-	2720	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	486	junction_17	54.2661007313158	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGTACTGCCTGGTTC	-13	True	NA	-33	True	AATAAA	-15	NA	123268595	123125219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_181748.nic	chr9	-	2533	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-9	-187	combination_of_known_junctions	FALSE	canonical	3	486	junction_17	54.2661007313158	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTCTGTGAAAACGGTA	-13	True	NA	24	True	AAAAAG	-4	NA	123268595	123125406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_181757.nic	chr9	-	2081	15	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-9	-250	combination_of_known_junctions	FALSE	canonical	3	486	junction_14	34.7349291941476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTATCCCTCAGGTAT	-13	True	NA	NA	False	AAGAAA	-3	NA	123268595	123136056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_181760.nic	chr9	-	1731	13	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-9	-3812	combination_of_known_junctions	FALSE	canonical	3	486	junction_12	35.8325581311497	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAGATAATGAAAGTAAAAA	-13	True	NA	NA	False	NA	NA	NA	123268595	123139618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_181768.known	chr9	-	5010	22	FSM	ENSG00000119522.17	ENST00000373624.6	5010	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	12.3543670613888	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCATCCCCGTGTCCTTG	22	True	NA	-6	True	AATAAA	-19	NA	123930107	123379653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_123382626_123383654_123383914_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_181772.known	chr9	-	3612	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	17.3097515868946	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTACTTCCATTAC	3	True	NA	NA	False	ACTAAA	-13	NA	123930126	123400098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_18178.nic	chr1	+	651	4	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-86	33922	-17	0	5prime_fragment	FALSE	canonical	3	579	junction_1	40.9416929574514	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAATTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	207752036	207759724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638
transcript_181780.known	chr9	+	3659	10	FSM	ENSG00000148204.12	ENST00000359999.7	3659	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	3.64471543707927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTAGCCTGGAATTT	3	True	NA	3	True	GATAAA	-29	NA	123356169	123374099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_123356355_123362864_123363189_123365916_123366113_123366226_123366367_123367171_123367358_123367572_123367687_123370107_123370981_123371069_123371579_123372176_123372343_123373133
transcript_181782.known	chr9	+	5613	13	FSM	ENSG00000148204.12	ENST00000373631.8	5613	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	3.70435179514881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCCCTGTCCTCTTCC	-25	True	NA	NA	False	NA	NA	NA	123356196	123378753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_123356355_123362864_123363189_123365916_123366113_123366226_123366367_123367171_123367358_123367572_123367687_123370107_123370981_123371069_123371579_123372176_123372343_123373133_123373921_123374578_123374696_123375216_123375344_123376837
transcript_181784.known	chr9	+	3619	11	FSM	ENSG00000119408.17	ENST00000373600.7	3619	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.976223748537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAACCTATCTGTCC	-6	True	NA	NA	False	NA	NA	NA	124257962	124353307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124258086_124292848_124293014_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
transcript_181786.known	chr9	+	3468	10	FSM	ENSG00000119408.17	ENST00000320246.10	3468	10	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	9.19070921107121	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAACCTATCTGTCC	-20	True	NA	NA	False	NA	NA	NA	124257948	124353307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124258086_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
transcript_181799.known	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1951	junction_2	126.403468048523	1015	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-3	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
transcript_18180.known	chr1	-	7969	8	FSM	ENSG00000174059.17	ENST00000310833.12	7969	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1.67819144635296	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTCACTTTAACCCTT	-21	True	NA	NA	False	NA	NA	NA	207911125	207880971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_207887924_207888681_207888847_207889160_207889214_207889464_207889622_207897492_207897574_207898972_207899227_207899820_207900004_207911001
transcript_181807.known	chr9	-	1846	10	FSM	ENSG00000148200.17	ENST00000344523.8	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	15.6473482153635	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCAATGCATTTTCTT	-20	True	NA	-60	True	NA	NA	NA	124771287	124522466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538317_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
transcript_181812.nic	chr9	-	2771	9	ISM	ENSG00000148200.17	ENST00000487099.7	7065	10	-23	6244	-23	-1052	5prime_fragment	FALSE	canonical	3	40	junction_3	12.1854164885735	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTTTGAGTTGCACCT	-15	True	NA	NA	False	NA	NA	NA	124771334	124523518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_124524874_124526778_124526901_124535877_124536133_124538091_124538320_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
transcript_181818.nic	chr9	-	1378	3	ISM	ENSG00000148200.17	ENST00000344523.8	1846	10	-47	31083	-23	-15458	5prime_fragment	FALSE	canonical	3	62	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGCTAAAAAGCAGGGT	-15	True	NA	NA	False	NA	NA	NA	124771334	124553549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_124554571_124733307_124733350_124771019
transcript_18182.known	chr1	-	11508	32	FSM	ENSG00000076356.7	ENST00000367033.4	11508	32	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_30	7.85958987261172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGATTGTTCAGCAGCATA	-1	True	NA	NA	False	AATAAA	-39	NA	208244384	208022241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_208027339_208028008_208028160_208028829_208029043_208031589_208031760_208033318_208033510_208034492_208034593_208038370_208038475_208038824_208038985_208039620_208039768_208039991_208040059_208042097_208042367_208043060_208043204_208044507_208044743_208045066_208045211_208045877_208046118_208051008_208051103_208051255_208051424_208052326_208052464_208054420_208054539_208060685_208060838_208079259_208079451_208082411_208082509_208084379_208084581_208092785_208092901_208096028_208096126_208096729_208096884_208098845_208098970_208103146_208103248_208142328_208142464_208210279_208210463_208216734_208218003_208243642
transcript_181822.nic	chr9	-	967	2	ISM	ENSG00000148200.17	ENST00000344523.8	1846	10	-47	210231	-23	-194606	5prime_fragment	FALSE	canonical	3	84	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTACTTGCATTTATGCA	-15	True	NA	NA	False	NA	NA	NA	124771334	124732697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_124733350_124771019
transcript_181825.known	chr9	+	6567	8	FSM	ENSG00000185585.20	ENST00000373580.8	6567	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	4.71212071499161	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGACTAAATGCTGTGG	11	True	NA	NA	False	AATAAA	-27	NA	124777132	124814882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124777361_124786974_124787239_124795023_124795132_124799284_124799492_124801413_124801664_124804093_124804343_124807780_124807967_124809807
transcript_181830.known	chr9	-	493	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	12637.8109160566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCTGGCACTTCC	7121	False	NA	-16	True	AATAAA	-20	NA	124861915	124857879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
transcript_181835.known	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	21296	junction_3	2938.86814947524	4405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-2	True	NA	-19	True	AATAAA	-17	NA	124861957	124857882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
transcript_18184.nic	chr1	-	2533	3	ISM	ENSG00000076356.7	ENST00000367033.4	11508	32	-47	187745	-47	0	5prime_fragment	FALSE	canonical	3	27	junction_1	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTCTTCATTCCCAA	79	False	NA	NA	False	NA	NA	NA	208244431	208209986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_208210463_208216734_208218003_208243642
transcript_181841.known	chr9	-	649	2	FSM	ENSG00000136942.15	ENST00000495728.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	21296	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGTAGTCCCAGCTAC	7055	False	NA	NA	False	NA	NA	NA	124861981	124860978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124861556_124861909
transcript_181842.known	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	25379	junction_1	1546.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	7100	False	NA	-19	True	AATAAA	-17	NA	124861936	124857882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124858068_124860182_124860265_124861418
transcript_181845.known	chr9	+	2507	6	FSM	ENSG00000136950.13	ENST00000353214.6	2507	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	534.300065506266	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGCTTTAAAAGTCTTC	6	True	NA	NA	False	AATAAA	-23	NA	124862129	124877733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124862399_124863987_124864108_124868427_124869440_124873691_124873765_124874974_124875152_124876877
transcript_181850.known	chr9	-	12111	18	FSM	ENSG00000173611.18	ENST00000336505.11	12111	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.0286786000783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGGTACTTTTTCGGT	6115	False	125143547	-2	True	AATAAA	-16	NA	125143528	124942607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
transcript_181851.nic	chr9	-	1920	17	ISM	ENSG00000173611.18	ENST00000336505.11	12111	18	-43	28650	-43	0	5prime_fragment	FALSE	canonical	3	26	junction_6	9.08789545219354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATTCAAAATAATATTTA	6072	False	NA	NA	False	AATAAA	-17	NA	125143571	124971257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
transcript_181854.nnic	chr9	-	822	5	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-43	-52296	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	17.8044938147649	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTTGTACTTTTGGT	6072	False	NA	-11	True	AATAAA	-24	NA	125143571	125052206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_125052596_125055875_125056008_125065989_125066059_125142632_125142678_125143384
transcript_181855.nnic	chr9	-	753	4	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-43	-52296	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	9.56846672960488	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTTGTACTTTTGGT	6072	False	NA	-11	True	AATAAA	-24	NA	125143571	125052206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_125052596_125055875_125056008_125142632_125142678_125143384
transcript_181856.known	chr9	-	546	2	FSM	ENSG00000173611.18	ENST00000468569.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGGAGGATCATTTGA	-10	True	NA	NA	False	NA	NA	NA	125143506	125142253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125142678_125143384
transcript_181858.known	chr9	-	4877	23	FSM	ENSG00000136935.14	ENST00000373555.9	4877	23	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_22	9.21281895284235	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGGGCTAGAGAATGT	3	True	NA	72	True	ATTAAA	-41	NA	124941083	124878274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940970
transcript_181863.known	chr9	-	4103	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_2	21.4864298259778	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGCTTGACTGGTGA	-17	True	NA	-1	True	ATTAAA	-18	NA	125189803	125146572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
transcript_181867.known	chr9	-	4172	6	FSM	ENSG00000119414.12	ENST00000415905.5	4172	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	159.784104340826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGCTTGACTGGTG	NA	False	NA	-2	True	ATTAAA	-17	NA	125189939	125146573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125171084_125171181_125189643
transcript_181870.known	chr9	+	1466	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	81.8503779771358	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	6	True	NA	113	True	ACTAAA	-20	NA	125200541	125234158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_181877.known	chr9	+	1313	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	109.687868843499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	6	True	NA	113	True	ACTAAA	-20	NA	125200541	125234158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_18188.known	chr1	+	1007	5	FSM	ENSG00000230937.13	ENST00000429156.6	1007	5	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_3	15.3704261489394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTCTATGTTTTA	-4	True	NA	23	True	ACTAAA	-23	NA	209428816	209432551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
transcript_181880.known	chr9	+	1671	8	FSM	ENSG00000136933.17	ENST00000373538.8	1671	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	58.2377253424378	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGGGAATGACTTTCA	6	True	NA	NA	False	ACTAAA	-23	NA	125200541	125234161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_181886.nnic	chr9	+	1326	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	16	-161	intron_retention	FALSE	canonical	3	15	junction_4	106.178570761189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTCAGTTACTTTCA	25	False	NA	13	True	AATAAA	-14	NA	125200560	125233997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125227909_125228060_125232595_125232746_125233687
transcript_181888.nic	chr9	+	1335	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	16	-161	intron_retention	FALSE	canonical	3	32	junction_3	98.2937773547576	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTCAGTTACTTTCA	25	False	NA	13	True	AATAAA	-14	NA	125200560	125233997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_18189.known	chr1	+	908	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	18	0	1	0	multi-exon	FALSE	canonical	3	22	junction_2	13.4742552876052	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	17	False	NA	21	True	ACTAAA	-21	NA	209428837	209432549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
transcript_181891.nnic	chr9	+	1173	6	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	16	-161	intron_retention	FALSE	canonical	3	42	junction_3	103.186045568187	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTCAGTTACTTTCA	25	False	NA	13	True	AATAAA	-14	NA	125200560	125233997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
transcript_18190.known	chr1	+	1072	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	8.80656320908194	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-3	True	NA	21	True	ACTAAA	-21	NA	209428817	209432549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
transcript_18191.known	chr1	+	1094	4	FSM	ENSG00000230937.13	ENST00000670788.1	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	14.4299072146089	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-1	True	NA	21	True	ACTAAA	-21	NA	209428819	209432549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429409_209430424_209430501_209431742_209431826_209432203
transcript_181910.known	chr9	-	3921	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_5	448.228394769398	4665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCTGATGTCTATA	-4	True	NA	-8	True	ATTAAA	-15	NA	125241343	125234852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_181919.known	chr9	-	4281	7	FSM	ENSG00000044574.9	ENST00000679475.1	4281	7	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_5	463.371131551757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-5	True	NA	-15	True	ATTAAA	-8	NA	125241344	125234859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240908_125241004
transcript_181921.known	chr9	-	4577	7	FSM	ENSG00000044574.9	ENST00000681675.1	4577	7	0	0	0	0	multi-exon	FALSE	canonical	3	5704	junction_5	385.521472236704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	1	True	NA	-15	True	ATTAAA	-8	NA	125241368	125234859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125240310_125240675_125240908_125241004
transcript_181924.known	chr9	-	4028	7	FSM	ENSG00000044574.9	ENST00000681544.1	4028	7	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_4	483.934482480153	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	1	True	NA	-15	True	ATTAAA	-8	NA	125241368	125234859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239534_125240171_125240310_125240675_125240908_125241004
transcript_181926.known	chr9	-	4052	7	FSM	ENSG00000044574.9	ENST00000679355.1	4052	7	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_4	483.315085862445	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	1	True	NA	-15	True	ATTAAA	-8	NA	125241368	125234859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_181927.known	chr9	-	4234	7	FSM	ENSG00000044574.9	ENST00000680257.1	4234	7	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_4	264.323297413519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	NA	False	NA	-15	True	ATTAAA	-8	NA	125241382	125234859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_181928.known	chr9	-	4919	6	FSM	ENSG00000044574.9	ENST00000681774.1	4919	6	0	0	0	0	multi-exon	FALSE	canonical	3	5958	junction_3	366.355892541665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-5	True	NA	-15	True	ATTAAA	-8	NA	125241344	125234859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125240908_125241004
transcript_18193.nic	chr1	+	1018	3	NIC	ENSG00000230937.13	novel	1094	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_1	11.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-1	True	NA	21	True	ACTAAA	-21	NA	209428819	209432549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_209429409_209431742_209431826_209432203
transcript_181937.known	chr9	+	9176	28	FSM	ENSG00000165219.23	ENST00000297933.11	9176	28	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	45.183576170502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTCTGTCATCTA	6	True	NA	23	True	ATTAAA	-27	NA	125261825	125367207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125268935_125268985_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
transcript_18194.known	chr1	+	2456	13	FSM	ENSG00000008118.10	ENST00000361322.3	2456	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.81811868577262	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTCATTTGGTTCTT	-2	True	NA	6	True	AATAAA	-20	NA	209583713	209613939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209583773_209594954_209595076_209599982_209600112_209603213_209603289_209605535_209605675_209606319_209606444_209607857_209607934_209608979_209609093_209609850_209609930_209611464_209611553_209611791_209612217_209612784_209612913_209613039
transcript_181945.known	chr9	+	8923	25	FSM	ENSG00000165219.23	ENST00000470056.5	8923	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_16	40.7826215712308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTCTGTCATCTA	12	True	NA	23	True	ATTAAA	-27	NA	125261831	125367207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
transcript_18195.known	chr1	-	4014	23	FSM	ENSG00000196878.15	ENST00000356082.9	4014	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	1.72308103827499	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTCCCCTCACTGGG	0	True	NA	5	True	AATAAA	-40	NA	209652425	209614869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_209615408_209616470_209616625_209617409_209617587_209617906_209618049_209618451_209618660_209622535_209622681_209622981_209623180_209623504_209623726_209623839_209624001_209625647_209626027_209626866_209626979_209627382_209627580_209628034_209628191_209629736_209629926_209630614_209630736_209632582_209632777_209633069_209633134_209634446_209634639_209637907_209637982_209638533_209638649_209649963_209650119_209650916_209650982_209652368
transcript_181958.nic	chr9	+	3249	18	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	41.6230405983335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGATGATCTGGGGC	-26	True	NA	NA	False	AAGAAA	-15	NA	125261793	125342255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218
transcript_181961.nic	chr9	+	3163	17	NIC	ENSG00000165219.23	novel	5309	28	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	37.1865546098318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGATGATCTGGGGC	NA	False	NA	NA	False	AAGAAA	-15	NA	125261767	125342255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321500_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218
transcript_181964.nic	chr9	+	3226	17	NIC	ENSG00000165219.23	novel	5207	27	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	29.8242246336766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGATGATCTGGGGC	NA	False	NA	NA	False	AAGAAA	-15	NA	125261767	125342255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218
transcript_181967.nic	chr9	+	3212	17	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	42.6358124116335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	-26	True	NA	NA	False	NA	NA	NA	125261793	125341264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_18197.known	chr1	+	876	2	FSM	ENSG00000123689.6	ENST00000367029.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTAATTCCTGAGAG	0	True	NA	16	True	AATAAA	-19	NA	209675411	209676390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209675550_209675652
transcript_181970.known	chr9	+	3163	17	FSM	ENSG00000165219.23	ENST00000467750.5	3163	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	48.8018554334771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	91	False	NA	NA	False	NA	NA	NA	125261910	125341264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_181973.known	chr9	+	3720	16	FSM	ENSG00000165219.23	ENST00000497580.5	3720	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	48.1788335267677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGAGAGCTGCTTTC	-26	True	NA	NA	False	NA	NA	NA	125261793	125341864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332018_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_181974.nic	chr9	+	3189	16	ISM	ENSG00000165219.23	ENST00000470056.5	8923	25	-64	25943	-26	0	5prime_fragment	TRUE	canonical	3	92	junction_1	30.6778240572712	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	NA	False	NA	NA	False	NA	NA	NA	125261767	125341264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_18198.known	chr1	-	4684	2	FSM	ENSG00000162757.4	ENST00000294811.2	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGAATTTTGTCCC	-7	True	NA	NA	False	ATTAAA	-16	NA	209784559	209779207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_209783710_209784377
transcript_181985.known	chr9	-	3369	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_4	173.088426261796	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-3	True	NA	NA	False	AATAAA	-18	NA	125707208	125437393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_181991.known	chr9	-	3045	11	FSM	ENSG00000119487.17	ENST00000373503.7	3045	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	265.402128853557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-7	True	NA	NA	False	AATAAA	-18	NA	125707212	125437393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125706970
transcript_181993.known	chr9	-	3256	11	FSM	ENSG00000119487.17	ENST00000350766.7	3256	11	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_4	147.322774885623	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	2	True	NA	NA	False	AATAAA	-18	NA	125707203	125437393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_181994.known	chr9	-	3252	11	FSM	ENSG00000119487.17	ENST00000373511.6	3252	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	271.295429375432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATATTGTGTTGAGT	-26	False	NA	NA	False	AATAAA	-19	NA	125707231	125437392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_18200.known	chr1	-	4478	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	9.62743475698485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGACTACTTTCTACT	-7	True	NA	-2	True	AATAAA	-26	NA	209806142	209785616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
transcript_182003.known	chr9	-	2977	10	FSM	ENSG00000119487.17	ENST00000394063.5	2977	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_9	249.914701497714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	125707234	125437393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
transcript_182018.nic	chr9	-	1786	9	NIC	ENSG00000119487.17	novel	2977	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	252.569761402667	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTATGATGGACCAT	-21	True	NA	-8	True	AATAAA	-19	NA	125707226	125438468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
transcript_182027.known	chr9	-	1586	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	291.531144413878	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-26	False	NA	0	True	AATAAA	-22	NA	125707231	125521467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_182033.known	chr9	-	1603	4	FSM	ENSG00000119487.17	ENST00000483937.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	371.41202038826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTATGATGGACCAT	NA	False	NA	-8	True	AATAAA	-19	NA	125471905	125438468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125471082
transcript_182045.known	chr9	+	2840	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	39.9898424603048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	5	True	NA	NA	False	AATAAA	-22	NA	125747372	125967377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_182046.known	chr9	+	2755	8	FSM	ENSG00000167081.18	ENST00000342287.9	2755	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	38.2713192554297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	118	False	NA	NA	False	AATAAA	-22	NA	125747344	125967377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125963011_125963102_125965830
transcript_182047.known	chr9	+	4838	10	FSM	ENSG00000196814.15	ENST00000361171.8	4838	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	7.36022007185742	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTTGCTGTCGTGGT	-18	True	NA	11	True	AATAAA	-20	NA	126326828	126507040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126327011_126340507_126340631_126381063_126381172_126386561_126386659_126392065_126392196_126395574_126395698_126421853_126421949_126481368_126481425_126483972_126484033_126503176
transcript_182049.known	chr9	+	5940	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	1	True	NA	18	True	AATAAA	-24	NA	126805039	126838210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126805133_126808792_126808916_126832486
transcript_182051.known	chr9	+	710	2	FSM	ENSG00000169155.10	ENST00000450858.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTCGTCCACAGAGC	-6	True	NA	NA	False	NA	NA	NA	126805032	126833096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126805133_126832486
transcript_182056.nnic	chr9	+	2771	20	NIC	ENSG00000136828.19	novel	6330	19	NA	NA	-8	1658	combination_of_known_splicesites	TRUE	canonical	3	32	junction_14	31.0830359626234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTTCTGTTC	-35	True	NA	24	True	NA	NA	NA	126914765	127219470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127196473_127196632_127199014_127199067_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127218739
transcript_182066.known	chr9	+	2362	18	FSM	ENSG00000136828.19	ENST00000424082.6	2362	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_17	25.6624346785962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAACATCGCAGTGACT	-27	True	NA	113	True	AAGAAA	-28	NA	126914773	127217445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
transcript_182067.nic	chr9	+	2561	18	NIC	ENSG00000136828.19	novel	2362	18	NA	NA	-8	1658	combination_of_known_junctions	FALSE	canonical	3	52	junction_17	23.9315633251025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTTCTGTTC	-35	True	NA	24	True	NA	NA	NA	126914765	127219470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127218739
transcript_18209.known	chr1	-	4256	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	34.8743777324015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATTAGAAGACTACTT	NA	False	NA	-8	True	AATAAA	-20	NA	209806175	209785622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
transcript_182093.known	chr9	+	1672	12	FSM	ENSG00000136828.19	ENST00000394022.7	1672	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	35.9455511103683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGAACCAGGCCCTCT	-15	True	NA	NA	False	NA	NA	NA	126914785	127184336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127183866
transcript_182094.known	chr9	-	3443	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	8.31790237980706	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATGTATCTACACTCT	-2	True	NA	-15	True	AATAAA	-15	NA	127122635	127087347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
transcript_182096.known	chr9	-	2575	4	FSM	ENSG00000136859.10	ENST00000373417.1	2575	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.8325958557674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGATGTATCTACACTC	-1	True	NA	-16	True	AATAAA	-14	NA	127122634	127087348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127122314
transcript_18212.known	chr1	+	8481	12	FSM	ENSG00000117597.18	ENST00000491415.7	8481	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	10.5227027292076	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGGAGTACTGATT	-44	True	NA	10	True	ATTAAA	-19	NA	209827971	209857565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209828171_209830107_209830148_209830802_209831044_209833184_209833359_209835074_209835164_209836800_209837212_209838908_209839129_209840852_209841056_209842264_209842448_209842582_209842696_209843450_209843697_209851203
transcript_182120.known	chr9	+	2145	10	FSM	ENSG00000136856.18	ENST00000373371.8	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	40.6241429159351	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	0	True	NA	NA	False	AATAAA	-34	NA	127397168	127407898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_182126.nic	chr9	+	1904	10	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-39	13	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	62.4294169343702	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCAGTGTCTCTGGGC	NA	False	NA	25	True	AATAAA	-16	NA	127397098	127407665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403737_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_182139.known	chr9	+	1937	9	FSM	ENSG00000136856.18	ENST00000373360.7	1937	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	59.8810017868773	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	3	False	NA	NA	False	AATAAA	-34	NA	127397230	127407898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127407111
transcript_182162.nic	chr9	+	1775	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-39	13	combination_of_known_junctions	TRUE	canonical	3	32	junction_2	62.1317903733668	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCAGTGTCTCTGGGC	NA	False	NA	25	True	AATAAA	-16	NA	127397098	127407665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127397287_127397375_127397539_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_182163.nic	chr9	+	1956	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	62.1317903733668	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	11	False	NA	NA	False	AATAAA	-34	NA	127397150	127407898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127397287_127397375_127397539_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_182172.nic	chr9	+	2348	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-39	13	intron_retention	FALSE	canonical	3	142	junction_2	38.4022704406914	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCAGTGTCTCTGGGC	NA	False	NA	25	True	AATAAA	-16	NA	127397098	127407665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127397287_127397375_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_18220.known	chr1	+	5222	4	FSM	ENSG00000082497.12	ENST00000367012.4	5222	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTCTCTGTTGCTTTC	-1	True	NA	14	True	AATAAA	-30	NA	210232795	210246255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_210233012_210237943_210238136_210239492_210239609_210241557
transcript_182203.known	chr9	+	1763	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	63.4211707394241	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	-2	True	NA	NA	False	NA	NA	NA	127397137	127407855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_18221.known	chr1	-	591	2	FSM	ENSG00000203706.8	ENST00000475406.5	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	1188	False	NA	1	True	AATAAA	-35	NA	210232972	210231455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_210231772_210232697
transcript_18222.known	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	116	False	NA	1	True	AATAAA	-35	NA	210234044	210231455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_210231772_210233634
transcript_182220.known	chr9	+	914	7	FSM	ENSG00000136856.18	ENST00000373352.5	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	89.6358373271167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCAAGCCCAGAGCCC	-2	True	NA	NA	False	NA	NA	NA	127397225	127407291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_18223.known	chr1	+	3639	12	FSM	ENSG00000054392.13	ENST00000261458.8	3639	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	5.25388482792723	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTATTTGAGGCTGAT	-25	True	NA	15	True	AATAAA	-16	NA	210328901	210676290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_210329105_210348932_210349067_210362851_210362920_210387467_210387582_210400467_210400663_210404463_210404680_210418153_210418326_210464504_210464656_210513152_210513189_210587897_210588100_210623525_210623671_210674287
transcript_182231.known	chr9	+	2192	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.13557004763649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	NA	False	NA	15	True	AATAAA	-23	NA	127424373	127445371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_182234.known	chr9	+	2078	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.83282518435822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACGCTCAGCTCTCCA	-33	True	NA	16	True	AATAAA	-24	NA	127424381	127445372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_182238.known	chr9	-	864	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_6	3665.5844463514	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-2	True	NA	-10	True	AATAAA	-23	NA	127451405	127447673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
transcript_182239.known	chr9	-	634	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	0	0	0	multi-exon	FALSE	canonical	3	3317	junction_1	2225.11862355446	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-3	True	NA	-10	True	AATAAA	-23	NA	127451406	127447673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
transcript_182246.nic	chr9	-	419	4	ISM	ENSG00000197958.13	ENST00000361436.10	634	7	-40	1609	-40	-173	5prime_fragment	FALSE	canonical	3	7788	junction_3	540.802079220198	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAAGTTGTCTTTTCCCT	NA	False	NA	NA	False	AAGAAA	-9	NA	127451446	127449282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_127449363_127449609_127449709_127450730_127450805_127451280
transcript_182248.known	chr9	+	3185	27	FSM	ENSG00000148356.15	ENST00000676170.1	3185	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	44.2021311971138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTTCAGTGCGCTTC	-7	True	NA	8	True	NA	NA	NA	127451509	127503483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482732_127482814_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_182254.known	chr9	+	3096	26	FSM	ENSG00000148356.15	ENST00000675448.1	3096	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	35.4604004489515	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCAGTGCGCTTCTGG	-6	True	NA	11	True	AATAAA	-3	NA	127451510	127503486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127451670_127451928_127452085_127454505_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_182258.known	chr9	+	3026	25	FSM	ENSG00000148356.15	ENST00000675572.1	3026	25	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_21	35.5805034003487	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-12	True	NA	24	True	AATAAA	-16	NA	127451504	127503499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_182265.known	chr9	+	3376	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	17.6729057379431	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-4	True	NA	24	True	AATAAA	-16	NA	127451512	127503499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_182273.known	chr9	+	3261	24	FSM	ENSG00000148356.15	ENST00000675141.1	3261	24	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_20	35.2985109760547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTCAGTGCGCTTCTG	-2	True	NA	10	True	AATAAA	-2	NA	127451514	127503485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_182282.known	chr9	+	3129	26	FSM	ENSG00000148356.15	ENST00000675224.1	3129	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_24	35.0416894569882	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCGAAGCAGGAGTGTCA	3	False	NA	-16	True	NA	NA	NA	127451488	127503459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497363_127501009_127501144_127502773
transcript_182286.nic	chr9	+	1650	13	ISM	ENSG00000148356.15	ENST00000675141.1	3261	24	-5	23507	0	11142	5prime_fragment	FALSE	canonical	3	125	junction_5	15.8664128130953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGCTCTGCTCCTCGGC	-7	True	NA	NA	False	NA	NA	NA	127451509	127479978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838
transcript_182295.known	chr9	+	2849	25	FSM	ENSG00000148356.15	ENST00000373322.1	2849	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.1893439915489	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	699	False	NA	24	True	AATAAA	-16	NA	127452254	127503499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127452300_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_182297.known	chr9	-	3942	14	FSM	ENSG00000136830.12	ENST00000373312.4	3942	14	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_7	21.4776614376054	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTGCCTTGAGTGGTG	-7	True	NA	-7	True	AATAAA	-14	NA	127569073	127505342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127507432_127507866_127507979_127508092_127508201_127508421_127508539_127508975_127509132_127510145_127510334_127516856_127517020_127517111_127517217_127517825_127517942_127523678_127523847_127525057_127525164_127527193_127527323_127531647_127531779_127568819
transcript_182301.known	chr9	+	3754	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	23.3679637194827	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	6	True	NA	10	True	AATAAA	-20	NA	127612276	127692699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
transcript_182304.known	chr9	+	2918	19	FSM	ENSG00000136854.24	ENST00000636962.2	2918	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_18	42.8709303219171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTCTGATTGTGGTTA	277	False	NA	13	True	AATAAA	-25	NA	127612221	127696027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127694993
transcript_182307.known	chr9	+	566	2	FSM	ENSG00000136854.24	ENST00000476182.3	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTTTCCAATGATTCT	90	False	NA	4	True	AATAAA	-15	NA	127612360	127613751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127612441_127613265
transcript_182308.known	chr9	-	645	5	FSM	ENSG00000187024.15	ENST00000456267.5	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	68.7622716320513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAAAGTGGGGGTGACT	9270	False	NA	-37	True	NA	NA	NA	127715604	127713971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127714190_127714378_127714425_127714602_127714703_127714974_127715195_127715543
transcript_18231.known	chr1	+	4474	12	FSM	ENSG00000117625.14	ENST00000419091.7	4474	12	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	24.1239910078901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTAATGTAGGCCT	-19	True	NA	7	True	AATAAA	-18	NA	211259365	211316385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
transcript_182310.known	chr9	-	962	5	FSM	ENSG00000187024.15	ENST00000543175.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	19.9170153386495	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGTGCAGTGGCTCAC	-6	True	NA	NA	False	ATTAAA	-15	NA	127715663	127713806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127714283_127714378_127714425_127714602_127714703_127714974_127715195_127715543
transcript_182311.nnic	chr9	-	931	5	NIC	ENSG00000187024.15	novel	962	5	NA	NA	-4	21	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	79.5785775193299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGACCAGTCCATTTC	-10	True	NA	-16	True	ATTAAA	-14	NA	127715667	127713950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127714283_127714378_127714425_127714602_127714703_127714974_127715195_127715434
transcript_182314.known	chr9	-	1500	5	FSM	ENSG00000160404.18	ENST00000373284.10	1500	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	19.421315609402	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTGCTAAGACTTTT	14	True	NA	-8	True	AATAAA	-19	NA	127735294	127731523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298_127734565_127735119
transcript_182316.nic	chr9	-	1392	4	NIC	ENSG00000187024.15	novel	962	5	NA	NA	-20	0	intron_retention	FALSE	canonical	3	154	junction_2	21.853044537445	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGCTTGGAAGCTGA	9191	False	NA	NA	False	AAAAAG	-4	NA	127715683	127713492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127714425_127714602_127714703_127714974_127715195_127715543
transcript_182318.known	chr9	-	569	4	FSM	ENSG00000187024.15	ENST00000414832.2	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	82.3097132110718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCACCAACCCAGCCAC	9243	False	NA	-133	True	NA	NA	NA	127715631	127714067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127714283_127714378_127714425_127714974_127715195_127715543
transcript_182322.known	chr9	-	1370	4	FSM	ENSG00000160404.18	ENST00000336067.10	1370	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	16.8193010820572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTGCTAAGACTTTT	16	True	NA	-8	True	AATAAA	-19	NA	127735292	127731523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127733384_127733561_127734298_127734565_127735119
transcript_182323.nic	chr9	-	1841	4	NIC	ENSG00000160404.18	novel	1500	5	NA	NA	-39	-1	intron_retention	FALSE	canonical	3	46	junction_3	21.4631467093403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGTTGCTAAGACTT	NA	False	NA	-10	True	AATAAA	-17	NA	127735352	127731525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127732692_127733384_127733561_127734298_127734565_127735119
transcript_182325.known	chr9	-	933	4	FSM	ENSG00000160404.18	ENST00000496460.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	8.25967446224258	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAACCCCTGGTCACCCC	-5	True	NA	NA	False	NA	NA	NA	127735313	127731843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127732563_127732692_127733384_127733561_127735119
transcript_182327.nnic	chr9	-	1381	4	NNC	ENSG00000160404.18	novel	933	4	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	33.7078955472189	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGTTGCTAAGACT	NA	False	NA	-11	True	AATAAA	-16	NA	127735362	127731526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127732279_127732563_127732774_127733384_127733561_127735119
transcript_182332.known	chr9	-	831	3	FSM	ENSG00000160404.18	ENST00000463256.5	831	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	31	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTGAATTATAACTCA	2	True	NA	NA	False	NA	NA	NA	127735275	127731779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127733384_127733561_127735119
transcript_182333.known	chr9	-	2477	3	FSM	ENSG00000160404.18	ENST00000373281.8	2477	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGTTGCTAAGACTTT	14	True	NA	-9	True	AATAAA	-18	NA	127735294	127731524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127733561_127734298_127734565_127735119
transcript_182334.known	chr9	-	855	3	FSM	ENSG00000160404.18	ENST00000493439.1	855	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGCCTGGAGCCAAG	2	True	NA	NA	False	NA	NA	NA	127735275	127732168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732692_127733384_127733561_127735119
transcript_182338.known	chr9	-	2211	2	FSM	ENSG00000160404.18	ENST00000463577.2	2211	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGTTGCTAAGACTTT	14	True	NA	-9	True	AATAAA	-18	NA	127735294	127731524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127733561_127735119
transcript_182340.known	chr9	-	2750	11	FSM	ENSG00000095370.20	ENST00000373277.8	2750	11	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_10	10.9654001294982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTCGGGCTCCTG	7322	False	NA	-1	True	AATAAA	-17	NA	127771438	127738316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127761610_127761651_127771185
transcript_182342.known	chr9	-	2682	10	FSM	ENSG00000095370.20	ENST00000420366.5	2682	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.97260955099433	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTCTCTCGGGCTCCT	7132	False	NA	-2	True	AATAAA	-16	NA	127755304	127738317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127755078
transcript_182343.known	chr9	-	2478	10	FSM	ENSG00000095370.20	ENST00000629203.2	2478	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	8.42981188372918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTTTTCGAGCCATG	-7	True	NA	NA	False	NA	NA	NA	127755274	127738485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127755084
transcript_182355.known	chr9	+	2483	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.2354805892498	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGAG	-27	True	NA	NA	False	AGTAAA	-16	NA	127786033	127790792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
transcript_182360.nic	chr9	+	1933	6	NIC	ENSG00000136807.14	novel	2483	7	NA	NA	0	-708	intron_retention	FALSE	canonical	3	866	junction_3	39.8025124835104	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTTTTCCTCCA	-27	True	NA	21	True	ATTAAA	-22	NA	127786033	127790084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788693_127789177
transcript_182362.known	chr9	+	706	5	FSM	ENSG00000136807.14	ENST00000480353.5	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_3	44.3473505409286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGCCAGGCATCTAC	13	True	NA	NA	False	NA	NA	NA	127786073	127788412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213
transcript_18237.known	chr1	+	1827	11	FSM	ENSG00000117625.14	ENST00000452621.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	25.2430188368983	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTTATGTTTTTGT	3	True	NA	13	True	AATAAA	-23	NA	211259387	211313298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
transcript_182376.known	chr9	+	2206	15	FSM	ENSG00000136877.15	ENST00000460181.5	2206	15	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_4	157.493051353035	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGCAAAGCCTTCGAC	16	True	NA	5	True	ATTAAA	-17	NA	127802917	127814058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806991_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_182383.known	chr9	+	2278	15	FSM	ENSG00000136877.15	ENST00000373225.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	145.416239303116	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAAGCCTTCGACT	220	False	NA	6	True	ATTAAA	-18	NA	127803207	127814059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803405_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_182391.known	chr9	+	2160	14	FSM	ENSG00000136877.15	ENST00000630236.2	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	168.503156081622	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGACCCCCTGCTCCCT	NA	False	NA	28	True	ATTAAA	-40	NA	127802857	127814081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_182394.known	chr9	+	2230	14	FSM	ENSG00000136877.15	ENST00000393706.6	2230	14	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_5	163.357016356505	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGACCCCCTGCTCCCT	NA	False	NA	28	True	ATTAAA	-40	NA	127802857	127814081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_182411.known	chr9	-	2946	15	FSM	ENSG00000106991.14	ENST00000373203.9	2946	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	5.61521257343816	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	-2	True	NA	-2	True	AATAAA	-17	NA	127854658	127815015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825694_127825861_127826509_127826673_127829686_127829828_127843093_127843246_127854288
transcript_182412.nnic	chr9	-	2086	11	NNC	ENSG00000106991.14	novel	2946	15	NA	NA	-1177	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	4.86723740945518	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	-1	True	NA	-2	True	AATAAA	-17	NA	127825582	127815015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825450
transcript_182430.known	chr9	-	2192	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	19.3168032782055	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATCTATTGAAAGAAG	-2	True	NA	NA	False	AATAAA	-19	NA	127877675	127866485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
transcript_182445.known	chr9	-	2357	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	135.652333395174	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	16	True	NA	-21	True	AATAAA	-12	NA	127899574	127885325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_18245.known	chr1	+	452	3	FSM	ENSG00000117625.14	ENST00000472734.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	48	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTGGAGAGAAACAAT	52	False	NA	17	True	ATTAAA	-14	NA	211259605	211261202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211259727_211260107_211260165_211260928
transcript_182450.known	chr9	-	2424	6	FSM	ENSG00000160408.16	ENST00000373141.5	2424	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	164.801699020368	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-3	True	NA	-17	True	AATAAA	-16	NA	127897408	127885321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897237
transcript_182451.known	chr9	-	2406	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	88.1421579041494	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-1	True	NA	-17	True	AATAAA	-16	NA	127899655	127885321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_18246.known	chr1	+	4246	11	FSM	ENSG00000117625.14	ENST00000367005.8	4246	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	18.8703471086252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTAATGTAGGCCT	11	True	NA	7	True	AATAAA	-18	NA	211259974	211316385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
transcript_182463.known	chr9	-	505	5	FSM	ENSG00000160408.16	ENST00000463086.5	505	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	174.345024305255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGAGCCCAAGGGGCCG	-3	True	NA	NA	False	NA	NA	NA	127899593	127886753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127886789_127887483_127887592_127894511_127894692_127896241_127896333_127899502
transcript_182477.nnic	chr9	-	1683	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-128	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.6838198206216	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCTAGCGTGGT	NA	False	NA	-12	True	NA	NA	NA	127917169	127907887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_18248.known	chr1	+	3976	11	FSM	ENSG00000082512.15	ENST00000261464.10	3976	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	24.3918019014586	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGTGATTTTTGTTTT	15	True	NA	25	True	AGTAAA	-22	NA	211326832	211374946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
transcript_182480.nnic	chr9	-	2025	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	48.1470548308917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCTAGCGTGGT	-24	True	NA	-12	True	NA	NA	NA	127917041	127907887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127908169_127908317_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_182483.known	chr9	-	1706	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	16.4146276229466	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-24	True	NA	-10	True	NA	NA	NA	127917041	127907885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_182484.nnic	chr9	-	1742	6	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	42.6680208118446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-32	True	NA	-10	True	NA	NA	NA	127917049	127907885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127908582_127909950_127910087_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_182487.nic	chr9	-	2181	6	NIC	ENSG00000136840.19	novel	1706	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	39.1387276236722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-29	True	NA	-10	True	NA	NA	NA	127917046	127907885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_182493.known	chr9	-	1013	5	FSM	ENSG00000136840.19	ENST00000361444.3	1013	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	38.0878917767839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAAGAAGAGGCCCA	21	True	NA	NA	False	NA	NA	NA	127916996	127908446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_182494.known	chr9	-	812	5	FSM	ENSG00000136840.19	ENST00000467674.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.6419489066801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATCCCAAGCCATCACA	-1	True	NA	NA	False	NA	NA	NA	127917018	127908343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127908582_127909950_127910059_127914655_127914842_127916407_127916495_127916825
transcript_1825.known	chr1	+	2401	5	FSM	ENSG00000158109.15	ENST00000378344.7	2401	5	0	0	0	0	multi-exon	TRUE	canonical	3	368	junction_1	21.6953335996476	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGTCTCTTCCCTCTT	-22	True	NA	73	True	ATTAAA	-18	NA	3625014	3630127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3625274_3625423_3625516_3625712_3625890_3627499_3627654_3628408
transcript_182502.nnic	chr9	-	2270	11	NNC	ENSG00000167103.12	novel	2176	10	NA	NA	-38	-5	intron_retention	FALSE	canonical	2	6	junction_2	32.8213345249702	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCATGTGACAGGCCCT	7754	False	NA	-13	True	ATTAAA	-14	NA	127930823	127920885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127922115_127923977_127924031_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
transcript_182505.known	chr9	-	2176	10	FSM	ENSG00000167103.12	ENST00000388747.9	2176	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	34.3223643031482	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-1	True	NA	-8	True	ATTAAA	-19	NA	127930777	127920880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
transcript_182522.nic	chr9	-	1763	5	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	-40	0	intron_retention	FALSE	canonical	2	2	junction_2	37.1685350800916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	9968	False	NA	-8	True	ATTAAA	-19	NA	127927531	127920880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127922115_127925106_127925232_127925866_127925980_127927152_127927209_127927296
transcript_182525.known	chr9	-	1104	5	FSM	ENSG00000167103.12	ENST00000300432.3	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	18.9340962287615	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	7920	False	NA	-6	True	AATAAA	-20	NA	127927491	127921528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
transcript_182526.nic	chr9	-	1701	5	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	-40	0	intron_retention	FALSE	canonical	3	16	junction_2	31.2609980646812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	9968	False	NA	-8	True	ATTAAA	-19	NA	127927531	127920880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152_127927209_127927296
transcript_182534.nic	chr9	-	2291	4	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	33	0	intron_retention	FALSE	canonical	3	74	junction_1	8.83176086632785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	7987	False	NA	-8	True	ATTAAA	-19	NA	127927424	127920880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127922115_127925106_127925980_127927152_127927209_127927296
transcript_182538.known	chr9	-	4617	11	FSM	ENSG00000167106.12	ENST00000373095.6	4617	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_9	15.2515572975352	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTTTTGTTTTTAC	3	True	NA	-6	True	ATTAAA	-19	NA	127980989	127940581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127943238_127944614_127944685_127944776_127944899_127945366_127945563_127945648_127945754_127948070_127948226_127948367_127948415_127950422_127950540_127953574_127953605_127953804_127953926_127979991
transcript_182546.known	chr9	-	912	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	257.294902138901	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-13	True	NA	-9	True	AATAAA	-16	NA	127937854	127935098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
transcript_182548.nnic	chr9	-	840	3	NIC	ENSG00000136908.18	novel	912	4	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	547	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-31	True	NA	-9	True	AATAAA	-16	NA	127937872	127935098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127935781_127936552_127936656_127937817
transcript_182549.known	chr9	-	1662	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_2	311.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	15	True	NA	-9	True	AATAAA	-16	NA	127937826	127935098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127935781_127936552_127937524_127937817
transcript_182551.known	chr9	+	3437	11	FSM	ENSG00000148339.13	ENST00000373069.10	3437	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	30.1986754676426	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	24	True	NA	12	True	AATAAA	-17	NA	128068231	128109245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128068581_128101095_128101223_128101308_128101397_128102079_128102116_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_182553.known	chr9	+	3431	10	FSM	ENSG00000148339.13	ENST00000373068.6	3431	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	11.5030860056909	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGAGCCAGTATTTTT	-7	True	NA	11	True	AATAAA	-16	NA	128068200	128109244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128068581_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_182554.known	chr9	+	3474	10	FSM	ENSG00000148339.13	ENST00000373064.9	3474	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	22.4438943826986	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	6476	False	NA	12	True	AATAAA	-17	NA	128098303	128109245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128098726_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_182556.nic	chr9	-	2415	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	322	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	NA	False	NA	-1	True	ATTAAA	-24	NA	128067884	128061232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128061827_128063373_128063901_128066590
transcript_182557.known	chr9	-	3398	2	FSM	ENSG00000171169.9	ENST00000373078.5	3398	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	13	True	NA	-1	True	ATTAAA	-24	NA	128067320	128061232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128063901_128066590
transcript_182560.known	chr9	+	3678	10	FSM	ENSG00000148339.13	ENST00000432073.6	3678	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.7434080951402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	5	True	NA	12	True	AATAAA	-17	NA	128091463	128109245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128092090_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_182565.known	chr9	-	1664	8	FSM	ENSG00000148334.16	ENST00000677651.1	1664	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	509.104455822944	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	10	True	NA	-24	True	AATAAA	-19	NA	128127725	128120715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
transcript_182568.known	chr9	-	1614	8	FSM	ENSG00000148334.16	ENST00000277462.9	1614	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	500.67179359133	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	NA	False	NA	-2	True	AATAAA	-41	NA	128128462	128120693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128128247
transcript_18257.known	chr1	+	3508	6	FSM	ENSG00000153363.14	ENST00000423222.6	3536	6	28	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	101.40808646257	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTTTCTTTTTTCCA	-12	True	NA	NA	False	AATAAA	-19	NA	211382802	211435333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
transcript_182572.known	chr9	-	1831	8	FSM	ENSG00000148334.16	ENST00000679345.1	1831	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	514.493013776173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	6	True	NA	-24	True	AATAAA	-19	NA	128127729	128120715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122647_128122933_128123135_128123701_128123848_128124491_128124551_128124778_128124872_128125243_128125442_128127438
transcript_182578.known	chr9	-	1598	7	FSM	ENSG00000148334.16	ENST00000338961.11	1598	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	401.324231624367	1977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	6	True	NA	-1	True	AATAAA	-42	NA	128127729	128120692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_18258.known	chr1	+	1671	5	FSM	ENSG00000153363.14	ENST00000664255.1	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	26.3912864407933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTACTCTGTCCCTT	NA	False	NA	NA	False	TTTAAA	-6	NA	211382735	211399219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035
transcript_182585.known	chr9	-	1554	7	FSM	ENSG00000148334.16	ENST00000678174.1	1554	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	504.100408869327	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	3	True	NA	-24	True	AATAAA	-19	NA	128127732	128120715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123725_128123852_128124491_128124551_128125243_128125442_128127438
transcript_182589.known	chr9	-	1748	7	FSM	ENSG00000148334.16	ENST00000678916.1	1748	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	401.324231624367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	0	True	NA	-24	True	AATAAA	-19	NA	128127735	128120715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122647_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_182592.known	chr9	-	2103	7	FSM	ENSG00000148334.16	ENST00000496594.5	2103	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	470.018232506877	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTGTCATGGCAGGC	18	True	NA	-31	True	AATAAA	-12	NA	128127717	128120722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
transcript_182597.known	chr9	-	930	6	FSM	ENSG00000148334.16	ENST00000474124.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	513.81265068116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGAGGCTGCTGACAAG	3	True	NA	NA	False	NA	NA	NA	128127732	128122447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128122480_128122933_128123135_128123701_128123848_128124491_128124551_128125243_128125442_128127438
transcript_18260.known	chr1	+	1115	4	FSM	ENSG00000153363.14	ENST00000662409.1	1115	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	8.25967446224258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGCTCCTTCTCA	-25	True	NA	NA	False	ATTAAA	-15	NA	211382789	211397513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766
transcript_182601.nic	chr9	-	2798	6	NIC	ENSG00000148334.16	novel	2103	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	999	junction_4	53.0396078416875	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	NA	False	NA	-2	True	AATAAA	-41	NA	128128476	128120693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_18261.known	chr1	+	469	3	FSM	ENSG00000153363.14	ENST00000610948.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	39.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	7328	False	NA	8	True	AATAAA	-14	NA	211399257	211432534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211399438_211426210_211426284_211432318
transcript_182618.known	chr9	-	3080	5	FSM	ENSG00000148334.16	ENST00000483625.6	3080	5	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_3	59.17083318663	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTGGGACATGTTTGCA	0	True	NA	-67	True	NA	NA	NA	128127735	128120758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_182622.known	chr9	-	1344	8	FSM	ENSG00000148334.16	ENST00000617202.4	1344	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	504.36745594085	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	229	False	NA	-2	True	AATAAA	-41	NA	128128188	128120693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123848_128124491_128124551_128125243_128125284_128125375_128125442_128128054
transcript_182629.known	chr9	+	3835	21	FSM	ENSG00000106976.21	ENST00000628346.2	3835	21	0	0	0	0	multi-exon	TRUE	canonical	1	12	junction_9	138.31878939609	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	17	False	NA	23	True	AATAAA	-24	NA	128203396	128255244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128254005
transcript_18263.known	chr1	+	681	6	FSM	ENSG00000153363.14	ENST00000657539.1	681	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	26.6007518690732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	15	True	NA	9	True	AATAAA	-15	NA	211382829	211432535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432320
transcript_182637.known	chr9	-	2907	18	FSM	ENSG00000148337.22	ENST00000357558.9	2907	18	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_10	120.875983802439	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCCACCAGTACTTCTG	-22	True	NA	-14	True	AATAAA	-21	NA	128191589	128166065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128178988_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
transcript_18264.known	chr1	-	5893	2	FSM	ENSG00000170385.10	ENST00000367001.5	5893	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTTGTGCATATGGCC	-5	True	NA	-4	True	AATAAA	-17	NA	211579161	211571567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211576290_211577990
transcript_182642.nic	chr9	-	2976	18	NIC	ENSG00000148337.22	novel	2858	18	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	236	junction_10	100.253864614997	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	1193	False	NA	-19	True	AATAAA	-16	NA	128191747	128166070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
transcript_18265.known	chr1	-	2134	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	20.6081022307009	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	5	True	NA	0	True	AATAAA	-23	NA	211675621	211662771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_182656.known	chr9	-	2731	17	FSM	ENSG00000148337.22	ENST00000372954.5	2731	17	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_14	121.852369693823	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCAGTACTTCTGT	-1	True	NA	-13	True	AATAAA	-22	NA	128191568	128166064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
transcript_182663.known	chr9	-	2975	17	FSM	ENSG00000148337.22	ENST00000372938.10	2975	17	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_13	84.3756481456587	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCAGTACTTCTGT	-5	True	NA	-13	True	AATAAA	-22	NA	128191572	128166064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
transcript_182664.nic	chr9	-	2923	17	NIC	ENSG00000148337.22	novel	2858	18	NA	NA	-49	0	intron_retention	FALSE	canonical	3	31	junction_16	138.053757079443	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-24	True	NA	-19	True	AATAAA	-16	NA	128191826	128166070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191731
transcript_18268.nic	chr1	-	2321	8	NIC	ENSG00000117650.13	novel	2134	8	NA	NA	-212	-10	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	56.7964500184112	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTGTAGTTATGTGTC	NA	False	NA	-10	True	AATAAA	-13	NA	211675842	211662781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_211663629_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_182689.known	chr9	-	2855	16	FSM	ENSG00000148337.22	ENST00000629610.2	2855	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	146.168487255861	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTCCCACCAGTACTT	-5	True	NA	-17	True	AATAAA	-18	NA	128191572	128166068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190687_128190863_128191431
transcript_18269.known	chr1	-	1865	7	FSM	ENSG00000117650.13	ENST00000366998.4	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	15.0738920727934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATATTGCCATGCC	69	False	NA	NA	False	AATAAA	-1	NA	211675557	211666429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_182692.nic	chr9	-	2909	16	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	5	0	intron_retention	FALSE	canonical	3	149	junction_13	110.18723459034	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-17	True	NA	-19	True	AATAAA	-16	NA	128191584	128166070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
transcript_1827.known	chr1	+	5192	14	FSM	ENSG00000078900.15	ENST00000378295.9	5192	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.76550723130263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTCTCATGACTCAACC	-3	True	NA	8	True	AATAAA	-17	NA	3652515	3736201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3652642_3682332_3682431_3683059_3683181_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3731462_3731557_3732746
transcript_18274.known	chr1	-	1318	8	FSM	ENSG00000117650.13	ENST00000540251.5	1318	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	67.0220798220517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCCTCGTAGGCTCAA	-4	True	NA	NA	False	NA	NA	NA	211675630	211658656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211658713_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_182747.nic	chr9	+	1304	4	ISM	ENSG00000106976.21	ENST00000636280.1	2462	10	-79	4131	-52	877	5prime_fragment	FALSE	canonical	3	56	junction_3	0.816496580927726	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATCATTTTGGCTACT	NA	False	NA	NA	False	AATAAA	-18	NA	128203326	128219823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048
transcript_182749.known	chr9	+	434	3	FSM	ENSG00000171159.5	ENST00000486420.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGGGCCACCCTTC	82	False	NA	NA	False	NA	NA	NA	128160459	128163737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128160487_128162003_128162116_128163442
transcript_182750.known	chr9	+	1570	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	10	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGTGTCCACATTAA	-8	True	NA	-20	True	NA	NA	NA	128160313	128163890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128160487_128162003_128162953_128163442
transcript_182754.known	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	-5	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128160487_128163442
transcript_182757.known	chr9	-	5426	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	36.1657183486443	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTCATTGTCTTT	-16	True	NA	-26	True	ATTAAA	-7	NA	128322447	128305158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
transcript_182766.known	chr9	+	466	5	FSM	ENSG00000175854.14	ENST00000495313.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	92.5337776166087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACAGCTCCCAGGGAC	14	True	NA	NA	False	NA	NA	NA	128275378	128288733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128275497_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_182767.known	chr9	+	763	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	24.963723680573	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	-24	True	NA	17	True	AATAAA	-17	NA	128276243	128288989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_182768.known	chr9	+	906	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	86.9522138878591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	857	False	NA	18	True	AATAAA	-18	NA	128276221	128288990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
transcript_182769.nic	chr9	+	1591	4	ISM	ENSG00000175854.14	ENST00000418976.2	763	5	-37	1827	-15	628	5prime_fragment	FALSE	canonical	3	175	junction_1	24.9131825880731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGGCTCGCTGGCTCGC	842	False	NA	NA	False	NA	NA	NA	128276206	128287162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938
transcript_182770.known	chr9	+	1048	4	FSM	ENSG00000175854.14	ENST00000419867.7	1048	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	92.4493855517109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTACAAACCCTTCAGTT	-26	True	NA	NA	False	NA	NA	NA	128276241	128286534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938
transcript_182773.known	chr9	+	1245	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.1541289588513	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	0	True	NA	24	True	AATAAA	-18	NA	128322838	128334072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
transcript_182789.known	chr9	+	781	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	-16	True	NA	20	True	AATAAA	-25	NA	128322581	128323584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128322929_128323015_128323148_128323282
transcript_182790.known	chr9	+	956	2	FSM	ENSG00000167113.11	ENST00000609948.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTCTACAGTGTT	54	False	NA	22	True	AATAAA	-27	NA	128322543	128323586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128322929_128323015
transcript_182792.nnic	chr9	+	2849	14	NNC	ENSG00000167114.13	novel	3229	13	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	44.3271858827517	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	-40	True	NA	15	True	AATAAA	-15	NA	128340483	128361217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128340584_128340753_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_182793.nnic	chr9	+	2866	14	NNC	ENSG00000167114.13	novel	3229	13	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	45.86860575691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	-23	True	NA	15	True	AATAAA	-15	NA	128340500	128361217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128340618_128340753_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_182797.known	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	12.4621649626201	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	3	True	NA	7	True	NA	NA	NA	128340526	128361470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_1828.nnic	chr1	+	2898	14	NNC	ENSG00000078900.15	novel	1668	11	NA	NA	-7097	538	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	3.43321747760329	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGGTCAGCTTTTTT	6193	False	NA	16	True	GATAAA	-17	NA	3675268	3733905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_3675397_3682332_3682431_3683059_3683181_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3731462_3731557_3732746
transcript_182802.nnic	chr9	+	2803	12	NIC	ENSG00000167114.13	novel	3229	13	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	46.8641433708576	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	-34	True	NA	15	True	AATAAA	-15	NA	128340489	128361217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_182808.nnic	chr9	+	2851	11	NIC	ENSG00000167114.13	novel	3229	13	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	51.8301070807306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	-34	True	NA	15	True	AATAAA	-15	NA	128340489	128361217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_182814.known	chr9	+	618	1	FSM	ENSG00000223551.1	ENST00000323496.5	618	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACACGTCTCACTAC	0	True	NA	17	True	AATAAA	-22	NA	128342152	128342770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128342200_128342800
transcript_182816.known	chr9	+	723	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	210.979264383967	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCAGCCCCAGAGCCAG	-2	True	NA	NA	False	NA	NA	NA	128371360	128390090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
transcript_182818.known	chr9	+	2595	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	49.3931928508373	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCTTTAATGAAAAG	11	True	NA	17	True	AATAAA	-26	NA	128371373	128392016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
transcript_18282.known	chr1	-	4430	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.070231019185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCCTTTTTCTCT	-21	True	NA	-6	True	AATAAA	-17	NA	212035557	211940402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_182821.known	chr9	+	803	4	FSM	ENSG00000167118.11	ENST00000483206.2	803	4	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	42.6796855137846	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAAAAGAGGCCAGGTG	12	True	NA	NA	False	NA	NA	NA	128371374	128389869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260
transcript_182823.known	chr9	+	753	3	FSM	ENSG00000167118.11	ENST00000372847.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	274.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCAGTGCAGTCTCCTT	8	True	NA	NA	False	NA	NA	NA	128371370	128388411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128377994_128378107_128387815
transcript_182825.known	chr9	+	3045	3	FSM	ENSG00000167118.11	ENST00000372850.5	3045	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	46	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	-2	True	NA	18	True	AATAAA	-19	NA	128371360	128390734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128378035_128378107_128387815
transcript_182832.known	chr9	+	2308	13	FSM	ENSG00000167123.20	ENST00000372838.9	2308	13	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_5	6.17960354715414	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATGTATGTATATA	2	True	NA	NA	False	AATAAA	-19	NA	128420856	128437347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128421075_128422867_128422979_128423145_128423264_128424137_128424273_128424409_128424615_128428301_128428422_128428756_128428834_128428929_128429037_128431170_128431304_128434101_128434230_128434409_128434614_128435652_128435906_128436848
transcript_182842.nic	chr9	+	3690	22	NIC	ENSG00000136811.17	novel	3653	23	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	22.4341818885112	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	41	False	NA	43	True	AAAAAG	-17	NA	128456122	128500960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128457197_128457438_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_182844.nic	chr9	+	3653	22	NIC	ENSG00000136811.17	novel	3653	23	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	25.9185887468895	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	41	False	NA	43	True	AAAAAG	-17	NA	128456122	128500960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128457197_128457438_128459566_128459658_128460549_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_182846.nic	chr9	+	3406	21	NIC	ENSG00000136811.17	novel	3387	21	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	16.4818081532337	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	28	False	NA	43	True	AAAAAG	-17	NA	128456109	128500960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_182848.known	chr9	+	3899	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	-76	-32	0	0	multi-exon	FALSE	canonical	3	40	junction_4	15.6501597435937	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	822	False	NA	34	True	NA	NA	NA	128456005	128501292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_182852.known	chr9	+	3030	21	FSM	ENSG00000136811.17	ENST00000604420.5	3030	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	25.8404237581352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACAGGCCTTAAATTTA	2	True	NA	NA	False	NA	NA	NA	128456151	128500483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_182857.nic	chr9	+	3309	20	NIC	ENSG00000136811.17	novel	3862	21	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	20.9757807840706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	28	False	NA	43	True	AAAAAG	-17	NA	128456109	128500960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_18286.nic	chr1	-	2722	17	ISM	ENSG00000143493.13	ENST00000366993.7	3422	20	-31	10945	-10	134	5prime_fragment	FALSE	canonical	3	141	junction_2	23.1718275876116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTGAAGTTGCAATAAT	-31	True	NA	NA	False	AATAAA	-22	NA	212035567	211952292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_182870.nic	chr9	+	2290	17	NIC	ENSG00000136811.17	novel	3791	21	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	17.1954527055847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGTGTTTGCACAAAG	28	False	NA	6	True	AATAAA	-17	NA	128456109	128494836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_182871.nic	chr9	+	2347	17	ISM	ENSG00000136811.17	ENST00000372807.10	2780	21	-48	5489	9	0	5prime_fragment	FALSE	canonical	3	40	junction_4	16.1516253052131	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGTGTTTGCACAAAG	28	False	NA	6	True	AATAAA	-17	NA	128456109	128494836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_182873.known	chr9	+	2059	16	FSM	ENSG00000136811.17	ENST00000688016.1	2059	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	23.094010767585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCATGTGTTTGCACA	17	False	NA	3	True	AATAAA	-14	NA	128456166	128494833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_182876.known	chr9	+	2249	16	FSM	ENSG00000136811.17	ENST00000372814.7	2249	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	22.790836365132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	873	False	NA	9	True	AATAAA	-20	NA	128456056	128494839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_182888.known	chr9	+	3600	17	FSM	ENSG00000119392.16	ENST00000683288.1	3600	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	31.4010723343965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATCTAGCAAGAGAT	16	True	NA	NA	False	NA	NA	NA	128504736	128542479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128507215_128507341_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_182890.known	chr9	+	3373	17	FSM	ENSG00000119392.16	ENST00000683748.1	3373	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	35.3816248213674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGGTTTTTTGAAAAA	8616	False	NA	12	True	NA	NA	NA	128504654	128542268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128532664_128532692_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_182892.known	chr9	+	3302	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.19903376568552	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	-2	True	NA	32	True	AATAAA	-19	NA	128504718	128542288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_182897.known	chr9	+	2218	14	FSM	ENSG00000119392.16	ENST00000372770.4	2218	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.82027850025065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTCTGTCTTAAATAT	10	True	NA	NA	False	AATAAA	-17	NA	128504730	128539877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615
transcript_182898.known	chr9	+	3060	13	FSM	ENSG00000119392.16	ENST00000684139.1	3060	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	30.8368241267194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAGACACAATAGGCC	5	True	NA	NA	False	ATTAAA	-4	NA	128504725	128542518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_182900.known	chr9	-	822	4	FSM	ENSG00000228395.2	ENST00000434999.2	822	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATCCTAATAATTTGC	-5	True	NA	NA	False	AGTAAA	-19	NA	128552410	128528656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128529001_128536826_128536956_128543378_128543685_128552367
transcript_182901.known	chr9	+	7875	57	FSM	ENSG00000197694.18	ENST00000372739.7	7875	57	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	144.03542648124	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	-3	True	NA	7	True	AATAAA	-18	NA	128552586	128633662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_182903.known	chr9	+	7889	56	FSM	ENSG00000197694.18	ENST00000372731.8	7889	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	144.762337004057	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	NA	False	NA	7	True	AATAAA	-18	NA	128552557	128633662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_182904.known	chr9	+	7812	56	FSM	ENSG00000197694.18	ENST00000630804.2	7812	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	133.393860366477	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGCTTTTCTTCAT	-3	True	NA	4	True	AATAAA	-15	NA	128552586	128633659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_182905.known	chr9	+	7794	55	FSM	ENSG00000197694.18	ENST00000358161.9	7794	55	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	133.8481790986	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	3	True	NA	7	True	AATAAA	-18	NA	128552592	128633662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_18291.known	chr1	+	4409	15	FSM	ENSG00000143476.18	ENST00000366991.5	4409	15	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_9	31.7972691678171	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGCATTTAAGATGGC	-12	True	NA	8	True	AATAAA	-22	NA	212035747	212105013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_182911.known	chr9	+	4102	25	FSM	ENSG00000197694.18	ENST00000625282.2	4102	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.8164836868358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTCTTTTGTTTGTTTGTT	0	True	NA	20	True	AAAAAG	-18	NA	128552589	128599495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962
transcript_182921.known	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4802	junction_1	830.220255998002	930	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	-23	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_182938.nnic	chr9	+	3321	23	NNC	ENSG00000160447.7	novel	3393	22	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.4853843756625	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	-12	True	NA	27	True	ATTAAA	-13	NA	128702498	128720916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128702735_128702810_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
transcript_182944.nnic	chr9	+	3361	22	NNC	ENSG00000160447.7	novel	3393	22	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_21	32.6119213626855	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	-20	True	NA	27	True	ATTAAA	-13	NA	128702490	128720916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720240_128720393
transcript_182946.known	chr9	+	3393	22	FSM	ENSG00000160447.7	ENST00000291906.5	3393	22	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_12	11.3814504772453	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	-8	True	NA	27	True	ATTAAA	-13	NA	128702502	128720916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
transcript_182955.nnic	chr9	+	3103	22	NNC	ENSG00000160447.7	novel	752	8	NA	NA	820	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	32.086405454117	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	462	False	NA	27	True	ATTAAA	-13	NA	128703322	128720916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128703470_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
transcript_18296.known	chr1	+	4471	14	FSM	ENSG00000143476.18	ENST00000542077.5	4471	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	111.431938523374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGACTTTGAGCATTTA	61	False	NA	1	True	AATAAA	-15	NA	212035552	212105006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_182980.known	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	74.1834718788491	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-16	True	NA	-16	True	TATAAA	-22	NA	128724127	128720872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_182984.nic	chr9	-	1189	5	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	194.333476272103	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAACCATATCAC	7012	False	NA	-23	True	TATAAA	-15	NA	128724199	128720879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_182985.nic	chr9	-	1364	4	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	-72	-2	intron_retention	FALSE	canonical	3	504	junction_1	21.8225164044439	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAACCATATCACTCCTT	7012	False	NA	-18	True	TATAAA	-20	NA	128724199	128720874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128721818_128722008_128722087_128722437_128722575_128723993
transcript_182989.known	chr9	-	4293	16	FSM	ENSG00000160445.11	ENST00000291900.7	4293	16	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_15	30.3808419165032	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	1	True	NA	-1	True	AATACA	-21	NA	128771927	128729785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771580
transcript_182990.nic	chr9	-	4086	16	NIC	ENSG00000160445.11	novel	4293	16	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_15	38.2601620487943	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	NA	False	NA	-1	True	AATACA	-21	NA	128771954	128729785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771814
transcript_182997.nic	chr9	-	2789	16	NIC	ENSG00000160445.11	novel	4293	16	NA	NA	-13	-1297	combination_of_known_junctions	FALSE	canonical	3	94	junction_15	38.2601620487943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTTGCAGCTTCCTT	NA	False	NA	NA	False	AAAACA	-14	NA	128771954	128731082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771814
transcript_183000.nic	chr9	-	2738	16	NIC	ENSG00000160445.11	novel	4293	16	NA	NA	-13	-1348	combination_of_known_junctions	FALSE	canonical	3	94	junction_15	38.2601620487943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAAGTTTTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	128771954	128731133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771814
transcript_183011.nnic	chr9	+	721	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	2	True	NA	11	True	AATAAA	-20	NA	128724452	128733194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128724636_128730063_128730249_128732841
transcript_183012.known	chr9	+	544	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	10	5	10	-5	multi-exon	FALSE	canonical	3	35	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	-6	True	NA	11	True	AATAAA	-20	NA	128724444	128733194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128724636_128732841
transcript_183018.known	chr9	+	3855	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_8	17.5414503202798	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	-33	True	NA	19	True	AATAAA	-22	NA	128787252	128810430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_183019.nnic	chr9	+	3786	12	NNC	ENSG00000107021.16	novel	3855	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	73.2701330467894	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCATTGGTGCTGTGA	-33	True	NA	13	True	AATAAA	-16	NA	128787252	128810424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805921_128806020_128806253_128806312_128807813
transcript_183023.nic	chr9	+	3808	11	NIC	ENSG00000107021.16	novel	3855	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	75.7248308020559	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCATTGGTGCTGTGA	-33	True	NA	13	True	AATAAA	-16	NA	128787252	128810424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128787377_128788333_128788408_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_183024.known	chr9	+	3378	10	FSM	ENSG00000107021.16	ENST00000223865.8	3378	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	82.0419946666882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCATTGGTGCTGTGA	8	True	NA	13	True	AATAAA	-16	NA	128787348	128810424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128805858_128806020_128806253_128806312_128807813
transcript_183041.known	chr9	-	1971	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_8	22.8587146036984	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-3	True	NA	-5	True	AATGAA	-15	NA	128881950	128832941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_183042.nic	chr9	-	1892	13	NIC	ENSG00000171097.14	novel	1971	13	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	47.6564674403054	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATTGACGGCTTCTCT	NA	False	NA	-6	True	AATAAA	-19	NA	128882558	128833118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128882406
transcript_183049.known	chr9	-	2089	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	45.3378521032187	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	22	True	NA	-5	True	AATGAA	-15	NA	128882036	128832941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_183055.known	chr9	-	4259	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	63.0100346199708	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTTGAATTATCCTGAA	6	True	NA	NA	False	AATAAA	-17	NA	128829794	128819650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_183066.known	chr9	-	1623	12	FSM	ENSG00000171097.14	ENST00000320665.10	1623	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	50.4819745262219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATTGACGGCTTCTCT	18	True	NA	-6	True	AATAAA	-19	NA	128881929	128833118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128842653_128842802_128845352_128845412_128881896
transcript_18307.known	chr1	-	483	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	828	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	39	False	NA	NA	False	NA	NA	NA	212052006	212051523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212051500_212052000
transcript_1831.nnic	chr1	+	2802	13	NNC	ENSG00000078900.15	novel	1668	11	NA	NA	-7097	536	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	5.16599457994296	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGTGGGTCAGCTTTT	6193	False	NA	14	True	GATAAA	-15	NA	3675268	3733903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_3675397_3682332_3682431_3683059_3683181_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3732746
transcript_183105.known	chr9	+	4334	4	FSM	ENSG00000136802.12	ENST00000372600.9	4334	4	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_3	28.1108915230774	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTTGGAGGTCTTTG	-23	True	NA	18	True	AATAAA	-15	NA	128882132	128918039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128882251_128886014_128886122_128907156_128909322_128916095
transcript_18311.known	chr1	+	3245	13	FSM	ENSG00000066027.12	ENST00000261461.7	3245	13	0	0	0	0	multi-exon	TRUE	canonical	3	198	junction_1	22.1790379011855	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTTATGTCATCTTT	-6	True	NA	14	True	AATAAA	-14	NA	212285409	212361853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212286292_212329134_212329332_212333496_212333599_212342187_212342281_212345802_212345934_212347346_212347407_212348388_212348498_212349188_212349243_212356625_212356677_212356949_212357070_212357156_212357285_212358685_212358788_212360637
transcript_183112.known	chr9	+	1145	3	FSM	ENSG00000167136.7	ENST00000372642.5	1145	3	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	21.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTCTGGTGGCGTCCG	0	True	NA	26	True	ATTAAA	-17	NA	128818499	128822676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128819186_128820738_128820849_128822327
transcript_183114.known	chr9	+	4161	3	FSM	ENSG00000136802.12	ENST00000372599.7	4161	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	362.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGCCTTTGGAGGTCT	40	False	NA	15	True	AATAAA	-12	NA	128882195	128918036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128882251_128907156_128909322_128916095
transcript_183118.known	chr9	-	898	3	FSM	ENSG00000198917.13	ENST00000467582.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	209.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAACGCTGCTAGGAGA	4978	False	NA	-39	True	NA	NA	NA	128824822	128822090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128822834_128824071_128824175_128824770
transcript_183121.nnic	chr9	+	5835	45	NNC	ENSG00000095319.14	novel	5689	44	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	169.471704347304	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	NA	False	NA	31	True	ATTAAA	-17	NA	128947679	129007096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128947752_128948501_128948629_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_183125.known	chr9	+	5689	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_1	80.3864382116191	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	-6	True	NA	31	True	ATTAAA	-17	NA	128947698	129007096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_183129.nic	chr9	+	5716	44	NIC	ENSG00000095319.14	novel	5689	44	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_24	131.711141404765	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	NA	False	NA	31	True	ATTAAA	-17	NA	128947638	129007096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990152_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_183149.known	chr9	+	2047	13	FSM	ENSG00000175287.19	ENST00000372592.8	2047	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.5514138607183	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	-7	True	NA	21	True	AATAAA	-18	NA	128920981	128942038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
transcript_183150.known	chr9	-	1985	13	FSM	ENSG00000148341.18	ENST00000372554.8	1985	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	296.760881575273	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTGGGCTCCTGTCA	34	True	NA	-10	True	AATAAA	-16	NA	129028279	129008038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008792_129009105_129009347_129009452_129009468_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129013007_129013020_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_183153.known	chr9	-	1365	12	FSM	ENSG00000148341.18	ENST00000372559.5	1365	12	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_1	186.11286898009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-1	True	NA	-5	True	AATAAA	-21	NA	129028214	129008033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008151_129008683_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_183156.known	chr9	-	3013	11	FSM	ENSG00000148341.18	ENST00000372564.8	3013	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	71.1924153263534	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGTGTGGAAAACAGG	-18	True	NA	3	True	TATAAA	-29	NA	129028331	129007035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_183165.known	chr9	-	1415	10	FSM	ENSG00000148341.18	ENST00000416629.5	1415	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	205.758638418781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCACCCCACCCTCCAGG	3	True	NA	NA	False	NA	NA	NA	129028210	129008449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_183166.nic	chr9	-	3525	10	NIC	ENSG00000148341.18	novel	1985	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	578	junction_2	47.7340885518572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTGGGCTCCTGTCA	9	True	NA	-10	True	AATAAA	-16	NA	129028304	129008038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_183173.known	chr9	-	2074	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	597	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGTTTTGCTGATATA	6	True	NA	-7	True	AATAAA	-17	NA	128947603	128945529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128945500_128947600
transcript_183181.known	chr9	+	3610	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	26.2182294511959	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	-1	True	NA	28	True	AATAAA	-23	NA	129036625	129072082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
transcript_183182.nic	chr9	+	4247	16	NIC	ENSG00000148343.19	novel	4345	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	64	junction_1	19.5736784710715	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	-6	True	NA	17	True	AATAAA	-12	NA	129036620	129072071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068976_129069075_129069130_129069848_129069966_129070246
transcript_183197.known	chr9	-	411	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACGTCTATGCTACTTAA	NA	False	NA	-5	True	AATAAA	-15	NA	129080765	129080354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129080400_129080800
transcript_18320.known	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	17.8279761805393	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-17	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_183209.known	chr9	+	2169	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	13.4786301005612	2928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	-6	True	NA	16	True	AATAAA	-17	NA	129081110	129090438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_183216.known	chr9	+	2037	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	95.130465969402	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	-6	True	NA	13	True	AATAAA	-14	NA	129081110	129090435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_183228.known	chr9	+	1932	6	FSM	ENSG00000167130.18	ENST00000327812.12	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	128.810869106609	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	17	True	NA	16	True	AATAAA	-17	NA	129081133	129090438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129081208_129084667_129084769_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_18323.nnic	chr1	-	1795	7	NIC	ENSG00000065600.13	novel	2119	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	50.7589619892115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAGTGTGACAATATGAA	-36	True	NA	-12	True	AATAAA	-16	NA	212414905	212364475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_212365377_212375192_212375301_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_183242.known	chr9	-	2848	15	FSM	ENSG00000095321.18	ENST00000679520.1	2848	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	21.2295519865828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGTGAAGAGGTGTT	19	True	NA	-13	True	AATAAA	-8	NA	129110710	129094805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129109102_129109278_129110482
transcript_183243.known	chr9	-	2253	15	FSM	ENSG00000095321.18	ENST00000458362.5	2253	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	18.7458839019478	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTAGGACTCAGGCCTG	-53	True	NA	NA	False	NA	NA	NA	129110782	129095396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129109178_129109278_129110482
transcript_183247.known	chr9	-	2768	14	FSM	ENSG00000095321.18	ENST00000318080.7	2768	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	8.60576385904431	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-64	True	NA	-1	True	AATAAA	-20	NA	129110793	129094793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
transcript_183248.known	chr9	-	2524	14	FSM	ENSG00000095321.18	ENST00000455396.2	2524	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	18.7534612189939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGTGAAGAGGTGTT	48	True	NA	-13	True	AATAAA	-8	NA	129110681	129094805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107933_129108078_129110482
transcript_183251.known	chr9	-	2623	14	FSM	ENSG00000095321.18	ENST00000681627.1	2623	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.8733214960671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTGTTGGTGAAGAG	-8	True	NA	-18	True	AATAAA	-3	NA	129110737	129094810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129096069_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
transcript_183263.known	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	196.123456016867	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	-2	True	NA	24	True	ATTAAA	-20	NA	129110949	129148944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_183265.known	chr9	+	2746	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	233.713071949346	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	10	True	NA	25	True	ATTAAA	-21	NA	129111412	129148945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_183281.known	chr9	+	2640	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	61.9856614244151	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	12	True	NA	26	True	ATTAAA	-22	NA	129111414	129148946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_183292.known	chr9	+	2526	10	FSM	ENSG00000119383.21	ENST00000452489.6	2526	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	205.033330623747	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	104	False	NA	25	True	ATTAAA	-21	NA	129111687	129148945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111792_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_183304.known	chr9	+	2515	9	FSM	ENSG00000119383.21	ENST00000355007.7	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	218.340867395456	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	11	True	NA	26	True	ATTAAA	-22	NA	129111413	129148946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_183305.known	chr9	+	2653	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	204.63439196528	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	-14	True	NA	25	True	ATTAAA	-21	NA	129111313	129148945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_18333.known	chr1	+	916	4	FSM	ENSG00000117691.10	ENST00000366988.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	46.0072458061409	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTTCCCCAGAGGCCA	-1	True	NA	27	True	AATAAA	-22	NA	212432919	212446379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212433121_212442564_212442626_212444338_212444443_212445829
transcript_183330.known	chr9	+	1989	4	FSM	ENSG00000119383.21	ENST00000347048.8	1989	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	314.042813783231	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	6	True	NA	26	True	ATTAAA	-22	NA	129111408	129148946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129142444_129142553_129147386
transcript_183337.known	chr9	+	1153	3	FSM	ENSG00000119383.21	ENST00000414510.5	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	305	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAGAAACTCAGGGAG	1	True	NA	NA	False	NA	NA	NA	129140007	129148287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129140152_129142444_129142553_129147386
transcript_183338.known	chr9	+	988	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	335.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTCGGGTGGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	129139381	129147998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_183340.known	chr9	+	857	3	FSM	ENSG00000119383.21	ENST00000432651.5	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	332	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGGAGAGGCCTTAG	159	False	NA	NA	False	NA	NA	NA	129141953	129148006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129142083_129142444_129142553_129147386
transcript_183341.known	chr9	+	618	3	FSM	ENSG00000119383.21	ENST00000435132.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	337	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTCTGGTTTTGAGAG	-5	True	NA	NA	False	NA	NA	NA	129141993	129147772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129142118_129142444_129142553_129147386
transcript_183342.known	chr9	+	952	3	FSM	ENSG00000119383.21	ENST00000419582.5	952	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	364.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGAGGCTGGCCGCCAG	-9	True	NA	NA	False	NA	NA	NA	129141645	129147957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129141919_129142444_129142553_129147386
transcript_183343.known	chr9	+	870	3	FSM	ENSG00000119383.21	ENST00000434095.2	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	337	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGGGTCGGGTGGTGG	-1	True	NA	NA	False	NA	NA	NA	129142024	129147995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129142178_129142444_129142553_129147386
transcript_183344.known	chr9	+	530	2	FSM	ENSG00000119383.21	ENST00000435305.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGGCATCTCCAAAGT	21	True	NA	NA	False	NA	NA	NA	129140117	129142940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129140152_129142444
transcript_183347.known	chr9	+	935	4	FSM	ENSG00000233901.7	ENST00000436710.6	935	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	9	True	NA	9	True	ATTAAA	-14	NA	129333918	129347462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129334199_129338791_129338918_129341751_129342044_129347225
transcript_183348.known	chr9	+	902	4	FSM	ENSG00000233901.7	ENST00000654190.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	19	False	NA	24	True	ATTAAA	-29	NA	129333886	129347477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129347225
transcript_183349.known	chr9	+	1138	4	FSM	ENSG00000233901.7	ENST00000654148.1	1138	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	0	True	NA	24	True	ATTAAA	-29	NA	129336922	129347477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129336989_129338791_129338918_129341349_129342044_129347225
transcript_18335.known	chr1	+	845	3	FSM	ENSG00000117691.10	ENST00000479589.5	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	327	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAATTCTTCCCCA	2	True	NA	20	True	AATAAA	-15	NA	212432922	212446372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212433121_212444338_212444443_212445829
transcript_183350.known	chr9	+	2226	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	3	0	3	0	multi-exon	FALSE	canonical	2	4	junction_1	4.54606056566195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTTTGTGTATTGAG	1069	False	NA	NA	False	AAGAAA	-44	NA	129336878	129348907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
transcript_183351.known	chr9	+	1997	3	FSM	ENSG00000204054.14	ENST00000663000.1	1997	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCTGAATCTCAGTTT	6	True	NA	13	True	CATAAA	-23	NA	129488702	129504545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129489300_129493418_129493596_129503322
transcript_183356.known	chr9	-	4603	6	FSM	ENSG00000148331.12	ENST00000277458.5	4603	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	18.3782480122562	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTTTGAATGCAGTAAG	-18	True	NA	-9	True	AATAAA	-16	NA	129642151	129634604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129638458_129638572_129638660_129639201_129639311_129639401_129639509_129640540_129640723_129641886
transcript_183361.nic	chr9	-	2880	5	NIC	ENSG00000148331.12	novel	2180	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	167	junction_3	9.90896059130321	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTCCTTATATAAAATT	NA	False	NA	16	True	ATTAAA	-20	NA	129642173	129636891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129638458_129638572_129639311_129639401_129639509_129640540_129640723_129641886
transcript_183363.known	chr9	+	1501	4	FSM	ENSG00000148335.15	ENST00000613644.4	1501	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	242.468325537355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	NA	False	NA	NA	False	AATAAA	-34	NA	129620212	129636131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129620321_129632649_129632866_129634053_129634307_129635207
transcript_183365.known	chr9	+	576	4	FSM	ENSG00000148335.15	ENST00000481189.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	225.767333529209	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCGCCCCAACGGCAT	3	True	NA	NA	False	NA	NA	NA	129626174	129635257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649_129632802_129634053_129634307_129635207
transcript_183367.known	chr9	+	741	4	FSM	ENSG00000148335.15	ENST00000372481.7	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	198.247320284538	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAAACTGAGGAAC	33	False	NA	NA	False	GGGGCT	-1	NA	129626204	129635473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649_129632866_129634053_129634222_129635207
transcript_183368.known	chr9	+	1530	4	FSM	ENSG00000148335.15	ENST00000372483.9	1530	4	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_3	41.5237549147741	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTGGGAGGCCGAGGC	-9	True	NA	NA	False	AATAAA	-38	NA	129626162	129636135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649_129632866_129634053_129634307_129635207
transcript_18337.known	chr1	+	2031	5	FSM	ENSG00000162772.17	ENST00000613954.4	2031	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	6.57171971404746	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTGTGCTGGTT	1568	False	NA	11	True	AATAAA	-21	NA	212608627	212620772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212608931_212615017_212615023_212615061_212615262_212618126_212618235_212619357
transcript_183374.known	chr9	+	1562	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	233.51802214533	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	-19	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
transcript_183383.known	chr9	+	1072	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	212.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTGCTGTGGGGTG	28	False	NA	NA	False	NA	NA	NA	129626199	129635930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129634053_129634307_129635207
transcript_183385.known	chr9	+	1346	3	FSM	ENSG00000148335.15	ENST00000617943.4	1346	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	250.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	-19	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626322_129634053_129634307_129635207
transcript_183387.known	chr9	+	1123	2	FSM	ENSG00000148335.15	ENST00000459968.6	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCATGGTGGCGC	28	False	NA	NA	False	AATACA	-13	NA	129626199	129633676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649
transcript_183388.known	chr9	+	1305	4	FSM	ENSG00000167157.11	ENST00000372469.6	1305	4	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	8.17856276425687	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCAGGAAGGTGGGTAA	8	True	NA	14	True	AATAAA	-23	NA	129665646	129722674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129666127_129719230_129719419_129720595_129720775_129722216
transcript_183389.known	chr9	-	1751	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCAGCACCTCGTC	-1	True	NA	-20	True	ATTAAA	-16	NA	129753042	129738348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129739861_129748654_129748738_129752886
transcript_18339.known	chr1	+	1940	4	FSM	ENSG00000162772.17	ENST00000341491.9	1940	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	5.55777733351102	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTGTGCTGGTTTCT	1	True	NA	14	True	AATAAA	-24	NA	212608760	212620775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212608931_212615017_212615262_212618126_212618235_212619357
transcript_183390.known	chr9	+	2738	5	FSM	ENSG00000136816.16	ENST00000259339.7	2738	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.0636689253589	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCGTTACTGATTTG	0	True	NA	17	True	AATAAA	-17	NA	129803183	129811281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129803412_129804072_129804339_129807187_129807364_129808904_129809033_129809341
transcript_183396.known	chr9	+	663	2	FSM	ENSG00000136816.16	ENST00000486372.1	663	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTACAAAGCTCTCCTAC	4	True	NA	NA	False	NA	NA	NA	129803156	129804480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129803412_129804072
transcript_183397.known	chr9	-	2285	6	FSM	ENSG00000136827.12	ENST00000651202.1	2285	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	229.851778326816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAATTTTGCATGTG	-3	True	NA	-25	True	TATAAA	-20	NA	129824244	129812964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129814223_129818177_129818298_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_183401.known	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	198.322968916866	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-10	True	NA	-2	True	AATAAA	-16	NA	129824136	129812941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_183406.known	chr9	-	1668	2	FSM	ENSG00000136827.12	ENST00000473084.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTGTAGCAGACCTGC	22	True	NA	NA	False	AATAAA	-20	NA	129824104	129821375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129822847_129823907
transcript_183407.nic	chr9	+	4390	26	NIC	ENSG00000136878.14	novel	4293	26	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_25	24.8397745561428	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	-11	True	NA	13	True	AATAAA	-16	NA	129835448	129881828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880378
transcript_183408.known	chr9	+	4293	26	FSM	ENSG00000136878.14	ENST00000372429.8	4293	26	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	20.6481379305738	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	-2	True	NA	13	True	AATAAA	-16	NA	129835457	129881828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
transcript_183411.known	chr9	+	4470	25	FSM	ENSG00000136878.14	ENST00000315480.9	4470	25	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	20.4137753054701	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	-2	True	NA	13	True	AATAAA	-16	NA	129835457	129881828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112
transcript_18342.known	chr1	+	1626	3	FSM	ENSG00000162772.17	ENST00000465155.5	1626	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCGGTGTGTCCCAGG	1610	False	NA	NA	False	NA	NA	NA	212608669	212619247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212608931_212615017_212615262_212618126
transcript_183432.known	chr9	-	1795	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	78.4098805954964	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGTTTGTATTATGT	-2	True	NA	NA	False	ATTAAA	-18	NA	129835275	129827289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_18345.known	chr1	-	836	3	FSM	ENSG00000123685.9	ENST00000243440.2	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCGTCTTCTGTCTTCT	-7	True	NA	-1	True	AATACA	-16	NA	212699840	212686416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212686980_212696960_212697066_212699672
transcript_183451.known	chr9	-	5420	17	FSM	ENSG00000187239.17	ENST00000446176.7	5420	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	17.1823856027037	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-16	True	NA	-10	True	AATAAA	-13	NA	130043189	129887186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183453.nic	chr9	-	5422	16	NIC	ENSG00000187239.17	novel	5410	16	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	14.5748642074863	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-15	True	NA	-10	True	AATAAA	-13	NA	130043236	129887186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183454.known	chr9	-	5410	16	FSM	ENSG00000187239.17	ENST00000420781.5	5410	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	11.9174941437647	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-21	True	NA	-10	True	AATAAA	-13	NA	130043194	129887186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183455.known	chr9	-	1977	16	FSM	ENSG00000187239.17	ENST00000355681.3	1977	16	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	20.4106725894948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	6	True	NA	NA	False	NA	NA	NA	130043167	129895811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129923940_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183457.nic	chr9	-	2103	16	NIC	ENSG00000187239.17	novel	1977	16	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	18.451618417424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-15	True	NA	NA	False	NA	NA	NA	130043236	129895811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183458.nic	chr9	-	2133	16	ISM	ENSG00000187239.17	ENST00000446176.7	5420	17	-47	8625	-42	0	5prime_fragment	FALSE	canonical	3	15	junction_5	16.6399786324649	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-15	True	NA	NA	False	NA	NA	NA	130043236	129895811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183462.nic	chr9	-	2088	15	NIC	ENSG00000187239.17	novel	1977	16	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	13.3790881602597	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-15	True	NA	NA	False	NA	NA	NA	130043236	129895811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183463.nic	chr9	-	2118	15	ISM	ENSG00000187239.17	ENST00000420781.5	5410	16	-42	8625	-42	0	5prime_fragment	FALSE	canonical	3	33	junction_5	9.85921303313064	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-15	True	NA	NA	False	NA	NA	NA	130043236	129895811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_183468.nic	chr9	-	367	3	ISM	ENSG00000187239.17	ENST00000355681.3	1977	16	-5	83533	-5	-998	5prime_fragment	FALSE	canonical	3	54	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCGAAGGAGGAAGAAG	1	True	NA	NA	False	NA	NA	NA	130043172	129979344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_129979375_129994842_129994959_130042951
transcript_183469.known	chr9	+	6991	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	25.7293606605372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGATGCAGGGAG	11	False	NA	25	True	AATAAA	-21	NA	130053705	130140169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_18347.known	chr1	-	790	7	FSM	ENSG00000117697.15	ENST00000626725.1	790	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	185.176867405792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGAACTTTATAACAC	4	True	NA	NA	False	NA	NA	NA	212791776	212738561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212738687_212739533_212739602_212766188_212766274_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_183471.known	chr9	+	6729	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	23.8166293566078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	-11	True	NA	20	True	AATAAA	-16	NA	130053905	130140164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_18348.known	chr1	-	13115	6	FSM	ENSG00000117697.15	ENST00000366977.8	13115	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	26.2526189169766	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	3	True	NA	0	True	AATAAA	-23	NA	212791777	212726152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212738687_212739533_212739602_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_183480.known	chr9	+	2833	17	FSM	ENSG00000148358.20	ENST00000493417.5	2833	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	29.1514766993029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGCTTCTTTGAC	4	True	NA	20	True	TTTAAA	-5	NA	130053920	130130024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077375_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639
transcript_183481.known	chr9	-	3258	2	FSM	ENSG00000196979.1	ENST00000358748.1	3258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAATGACTTCTAAAAA	NA	False	NA	NA	False	AGTAAA	-14	NA	130144219	130140609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130142892_130143243
transcript_183482.known	chr9	+	5164	8	FSM	ENSG00000107130.10	ENST00000372398.6	5164	8	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	29.5241167418732	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTGGGCCTGTTG	22	True	NA	13	True	ATTAAA	-25	NA	130172403	130237303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130172728_130200957_130200983_130217831_130217971_130219724_130219804_130222649_130222739_130223081_130223160_130226388_130226505_130232989
transcript_183488.nic	chr9	+	2001	4	ISM	ENSG00000148357.18	ENST00000683500.2	15789	98	-2	146545	-2	-51028	5prime_fragment	FALSE	canonical	3	6	junction_3	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGGTCTCCTTGTGTGC	1	True	NA	NA	False	NA	NA	NA	130265757	130287578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_130266138_130284602_130284674_130285157_130285317_130286187
transcript_183489.nic	chr9	+	3124	3	ISM	ENSG00000148357.18	ENST00000683500.2	15789	98	-254	146545	-254	-51028	intron_retention	FALSE	canonical	3	8	junction_1	1.5	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGGTCTCCTTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	130265505	130287578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_130266138_130284602_130284674_130285157
transcript_183491.known	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	206.695868904587	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	27	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_183493.known	chr9	+	1532	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	61.0327780786685	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	0	True	NA	30	True	ATTAAA	-25	NA	130444960	130501274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_183501.nic	chr9	+	4001	20	NIC	ENSG00000107164.16	novel	5090	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	188.733980076342	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	-11	True	NA	47	True	AATAAA	-31	NA	130579583	130638352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_130579765_130580658_130581514_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_183504.known	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_16	63.1792472569167	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	-18	True	NA	47	True	AATAAA	-31	NA	130579576	130638352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_183506.nnic	chr9	+	3109	18	NIC	ENSG00000107164.16	novel	3153	19	NA	NA	-28	0	combination_of_known_splicesites	TRUE	canonical	3	75	junction_16	142.094880334589	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	NA	False	NA	47	True	AATAAA	-31	NA	130579548	130638352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130635998_130636127_130637013
transcript_183513.known	chr9	+	2012	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_7	16.2860177759942	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	7	True	NA	14	True	NA	NA	NA	130693779	130704892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_183518.known	chr9	+	1956	8	FSM	ENSG00000130713.17	ENST00000546165.6	1928	8	-20	-8	4	2	multi-exon	FALSE	canonical	2	2	junction_5	68.0039014487029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAAAAATGGTGCCC	-13	True	NA	16	True	NA	NA	NA	130693759	130704894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130702142_130702311_130703052_130703182_130703693
transcript_183519.known	chr9	+	1885	8	FSM	ENSG00000130713.17	ENST00000372351.7	1885	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	67.4939150696459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	13	True	NA	-17	True	GATAAA	-27	NA	130693785	130704861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_183526.known	chr9	+	1957	9	FSM	ENSG00000130713.17	ENST00000372352.7	1957	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	66.4444081544866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	7	True	NA	-17	True	GATAAA	-27	NA	130693779	130704861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702157_130702311_130703052_130703182_130703693
transcript_183528.known	chr9	+	4754	11	FSM	ENSG00000097007.19	ENST00000372348.7	4754	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	102.227246857186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTCAGGGGTCAGGTG	117	False	NA	NA	False	NA	NA	NA	130713015	130885683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130714456_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
transcript_183530.known	chr9	+	5578	11	FSM	ENSG00000097007.19	ENST00000318560.6	5578	11	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	31.1899022120942	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCAGATTGCTTCGG	-14	True	NA	23	True	AATAAA	-19	NA	130835253	130887675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130835526_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
transcript_183533.known	chr9	-	3119	8	FSM	ENSG00000130720.13	ENST00000448616.5	3119	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	4.15515416349971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCAGCGCTTCCTTCT	8430	False	NA	1	True	NA	NA	NA	130939068	130902437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535_130938649_130939002
transcript_183535.nic	chr9	-	3157	8	NIC	ENSG00000130720.13	novel	3650	7	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	3.10365156891435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGCAGCGCTTCCTT	8179	False	NA	-1	True	NA	NA	NA	130939319	130902439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535_130938649_130939213
transcript_183538.known	chr9	-	3650	7	FSM	ENSG00000130720.13	ENST00000372338.9	3650	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	2.21108319357027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGCAGCGCTTCCTT	-18	True	NA	-1	True	NA	NA	NA	130939247	130902439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535
transcript_183540.known	chr9	-	449	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	8359	False	NA	-2	True	AATAAA	-16	NA	130939139	130938016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130938216_130938535_130938649_130939002
transcript_183541.known	chr9	-	385	3	FSM	ENSG00000130720.13	ENST00000463475.1	385	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	8212	False	NA	-2	True	AATAAA	-16	NA	130939286	130938016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130938216_130938535_130938649_130939213
transcript_183544.known	chr9	+	7455	28	FSM	ENSG00000050555.19	ENST00000361069.9	7455	28	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	15.4545219808658	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCCTAGATGTCTGG	-1	True	NA	NA	False	ATTAAA	-16	NA	131009173	131094473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131009588_131026284_131026590_131032044_131032176_131036165_131036333_131038863_131039053_131039130_131039249_131041636_131041736_131045523_131045661_131049019_131049131_131052490_131052684_131052849_131052966_131056928_131057148_131061034_131061224_131066959_131067206_131068077_131068232_131068907_131069051_131069671_131069851_131071483_131071626_131072629_131072836_131073244_131073322_131075830_131075966_131077186_131077335_131079148_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
transcript_18355.known	chr1	-	722	5	FSM	ENSG00000117697.15	ENST00000366976.3	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	169.116084391757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGCAAACTAAAGACTG	-2	True	NA	NA	False	NA	NA	NA	212791782	212738482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212738687_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_183552.known	chr9	+	3515	7	FSM	ENSG00000126878.13	ENST00000372309.7	3515	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	610.171742672139	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTGGTGTATTTTGGGG	NA	False	NA	21	True	AATAAA	-22	NA	131096475	131123152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131106187_131106266_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_18356.known	chr1	+	1381	10	FSM	ENSG00000203705.11	ENST00000532324.5	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	108.373268992399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAACCTCCACTTCCCA	NA	False	NA	NA	False	NA	NA	NA	212791827	212815597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812226_212812329_212815012
transcript_183561.known	chr9	+	3340	6	FSM	ENSG00000126878.13	ENST00000372302.5	3340	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	512.850621526386	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	10	False	NA	14	True	AATAAA	-15	NA	131096541	131123145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114595_131117755_131117919_131120234
transcript_183564.known	chr9	+	3284	6	FSM	ENSG00000126878.13	ENST00000372300.5	3284	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	520.204036893217	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	19	False	NA	14	True	AATAAA	-15	NA	131096550	131123145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117848_131120234
transcript_183566.known	chr9	+	3374	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_5	35.9366108585659	3343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	-1	True	NA	13	True	AATAAA	-14	NA	131096530	131123144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_183572.known	chr9	+	3398	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	464.278106311293	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	-2	True	NA	14	True	AATAAA	-15	NA	131096529	131123145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_183587.known	chr9	+	7568	36	FSM	ENSG00000126883.18	ENST00000359428.10	7568	36	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_17	29.2582589072849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATGTTGCAGACAGT	-32	True	NA	18	True	AATAAA	-19	NA	131125585	131234663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146128_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
transcript_183588.known	chr9	+	6537	36	FSM	ENSG00000126883.18	ENST00000652454.1	6537	36	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	40.8377976179631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTAAACAGTCTGTTTC	-22	True	NA	-16	True	NA	NA	NA	131125595	131233678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146164_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
transcript_18359.known	chr1	+	2527	10	FSM	ENSG00000203705.11	ENST00000366974.9	2527	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	73.7443029814658	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTTCTTTTCCCTA	0	True	NA	NA	False	ATTAAA	-26	NA	212791893	212816830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_183592.known	chr9	+	2065	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	11	True	NA	22	True	AATACA	-18	NA	131289722	131309261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131290449_131307922
transcript_183593.known	chr9	+	972	2	FSM	ENSG00000160539.6	ENST00000372261.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTCTGGAGGCTCTA	0	True	NA	NA	False	AATAAA	-22	NA	131289811	131291445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131290449_131291110
transcript_183595.known	chr9	+	11238	32	FSM	ENSG00000288701.1	ENST00000683519.1	11238	32	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_1	76.2121061227612	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGAACGTGCTTTCT	0	True	NA	13	True	AATAAA	-16	NA	131394085	131500193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
transcript_183597.known	chr9	+	9157	31	FSM	ENSG00000288701.1	ENST00000682501.1	9157	31	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_15	70.1697624020173	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAACGTGCTTTCTCAGG	7	True	NA	17	True	AATAAA	-20	NA	131394092	131500197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
transcript_183598.nnic	chr9	+	7114	31	NNC	ENSG00000288701.1	novel	9157	31	NA	NA	0	-2022	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	82.0999390986376	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTTCTCCAGCCCTT	0	True	NA	8	True	AATAAA	-11	NA	131394085	131498149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484946_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
transcript_183607.nic	chr9	+	2755	16	ISM	ENSG00000288701.1	ENST00000684596.1	11253	32	18	25535	-15	3845	5prime_fragment	FALSE	canonical	3	127	junction_15	34.7694629747938	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGGATGCAGGTGCTC	-15	True	NA	NA	False	AAGAAA	-2	NA	131394070	131474636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453
transcript_183609.nic	chr9	+	2464	15	ISM	ENSG00000288701.1	ENST00000684596.1	11253	32	4	26569	4	2811	5prime_fragment	FALSE	canonical	3	189	junction_1	25.2041663222571	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCCCCATCGACTCACC	-29	True	NA	NA	False	AAGAAA	-6	NA	131394056	131473602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507
transcript_183629.known	chr9	+	2703	20	FSM	ENSG00000130714.19	ENST00000679023.1	2703	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_19	37.5450237563417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	-22	True	NA	14	True	ATTAAA	-17	NA	131502943	131523799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931_131523171_131523346
transcript_18363.known	chr1	+	2321	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_8	76.4038975154773	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	-10	True	NA	-1	True	AATAAA	-10	NA	212791883	212816617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
transcript_183632.known	chr9	+	3057	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	29.6243330394667	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	-48	True	NA	14	True	ATTAAA	-17	NA	131502917	131523799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183635.known	chr9	+	3252	20	FSM	ENSG00000130714.19	ENST00000372228.9	3252	20	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_8	40.8625152475294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	NA	False	NA	14	True	ATTAAA	-17	NA	131502788	131523799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510063_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183640.known	chr9	+	3309	20	FSM	ENSG00000130714.19	ENST00000676640.1	3309	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	39.0563907965119	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	NA	False	NA	14	True	ATTAAA	-17	NA	131502905	131523799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503314_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183646.known	chr9	+	2935	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.1166002545924	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	NA	False	NA	21	True	ATTAAA	-24	NA	131502894	131523806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183653.known	chr9	+	2583	19	FSM	ENSG00000130714.19	ENST00000683712.1	2583	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	41.3309437780006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAGTGTGGCAAAGAA	1	True	NA	NA	False	AAAACA	-5	NA	131502966	131523106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510416_131511336_131511473_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183660.known	chr9	+	2573	19	FSM	ENSG00000130714.19	ENST00000678303.1	2573	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.0545060882577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGTCCTTGCTAACT	-18	True	NA	106	True	AAAAAG	-40	NA	131502947	131523435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506402_131506454_131507350_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183685.known	chr9	+	2501	18	FSM	ENSG00000130714.19	ENST00000677099.1	2501	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	38.9180667165652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAACACCCAGCAACCT	46	True	NA	NA	False	NA	NA	NA	131503011	131523495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183686.known	chr9	+	2461	18	FSM	ENSG00000130714.19	ENST00000677216.1	2461	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.5627156756944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGCTAACTGCTGCAG	NA	False	NA	NA	False	NA	NA	NA	131502897	131523442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_18369.known	chr1	+	794	9	FSM	ENSG00000203705.11	ENST00000526997.5	794	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	119.443239658007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATCTGAACTGAAG	12	True	NA	-82	True	AATAGA	-10	NA	212791905	212815225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212812250_212812329_212815012
transcript_183698.known	chr9	+	3646	17	FSM	ENSG00000130714.19	ENST00000678546.1	3646	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.4104266731424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACAGCTCCATGCCTTT	-11	True	NA	-44	True	NA	NA	NA	131502954	131523741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510416_131511336_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_183699.known	chr9	+	2566	17	FSM	ENSG00000130714.19	ENST00000677853.1	2566	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	43.6806593356831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTGTCATCCATACAG	-36	True	NA	-56	True	NA	NA	NA	131502929	131523729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131510356_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_18371.known	chr1	+	1073	9	FSM	ENSG00000203705.11	ENST00000526641.5	1073	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	123.693610889973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTTATATAGAACCACC	-24	True	NA	108	True	NA	NA	NA	212791869	212815415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_183711.known	chr9	+	2213	17	FSM	ENSG00000130714.19	ENST00000677029.1	2213	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	45.2106182218293	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAGCGTAGGAGTCAT	-46	True	NA	34	True	NA	NA	NA	131502919	131523363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506402_131506454_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_18373.known	chr1	+	2206	9	FSM	ENSG00000203705.11	ENST00000525574.5	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	128.414368354947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATGAAATGATCTTCAA	32	True	NA	8	True	AATAAA	-19	NA	212791925	212816626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_183736.known	chr9	-	788	7	FSM	ENSG00000130717.13	ENST00000494584.5	788	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	166.727988718818	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGGGCGGAGCTACAA	-9	True	NA	NA	False	NA	NA	NA	131531264	131525147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529557_131530485_131530646_131531066
transcript_183738.known	chr9	-	2162	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	39.4785455096253	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-8	True	NA	-4	True	AATAAA	-21	NA	131531263	131523800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_183739.known	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	175.594624696265	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	20	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
transcript_183740.nic	chr9	-	2200	7	NIC	ENSG00000130717.13	novel	2237	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	177.411949992102	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-4	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531066
transcript_183741.known	chr9	-	2114	7	FSM	ENSG00000130717.13	ENST00000372211.7	2114	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	184.32617526789	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	131531200	131523800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531093
transcript_183743.nic	chr9	-	3080	6	NIC	ENSG00000130717.13	novel	2162	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	425	junction_3	43.0041858427758	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-25	True	NA	-4	True	AATAAA	-21	NA	131531280	131523800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131530646_131531066
transcript_183748.nic	chr9	-	2268	6	NIC	ENSG00000130717.13	novel	2162	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	458	junction_2	33.5642667132771	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-25	True	NA	-4	True	AATAAA	-21	NA	131531280	131523800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_131525222_131525928_131525978_131528943_131529271_131529487_131529585_131530485_131530646_131531066
transcript_183750.known	chr9	-	2063	6	FSM	ENSG00000130717.13	ENST00000372208.7	2063	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	199.419758298921	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-4	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_183758.known	chr9	-	795	5	FSM	ENSG00000130717.13	ENST00000459858.1	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	37.5124979173608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTGGACAATATGGGTAA	11	True	NA	NA	False	NA	NA	NA	131531244	131525944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525978_131528943_131529271_131529487_131529585_131530485_131530646_131531066
transcript_18376.known	chr1	+	498	6	FSM	ENSG00000203705.11	ENST00000488246.6	498	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_4	22.547727158186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCTACATTTATTTT	30	True	NA	6	True	ATTAAA	-24	NA	212791923	212804498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319
transcript_183763.known	chr9	+	607	3	FSM	ENSG00000130714.19	ENST00000483472.2	607	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	48.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGCACTTTGGGAGG	18	True	NA	NA	False	NA	NA	NA	131502983	131506812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402
transcript_18377.known	chr1	-	929	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	13	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	NA	False	NA	1	True	AATAAA	-40	NA	212858125	212856603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212857173_212857765
transcript_183774.known	chr9	-	1385	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	15.094261647854	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGCTTTGTCTCCTGT	-1	True	NA	-7	True	AATAAA	-15	NA	132079867	131860111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_183780.known	chr9	-	2042	4	FSM	ENSG00000160563.14	ENST00000651555.1	2042	4	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	16.4181471413663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGCCTCCAGAGGTTG	10	False	NA	NA	False	TATAAA	-28	NA	132079856	131937923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131939475_132014336_132014468_132077441_132077587_132079641
transcript_183782.known	chr9	-	555	3	FSM	ENSG00000160563.14	ENST00000650776.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTTTGGGTAGTGGA	1	True	NA	NA	False	NA	NA	NA	132079865	132014281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132014468_132077441_132077587_132079641
transcript_183783.known	chr9	-	762	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	210	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGAATTTTTAATTT	0	True	NA	NA	False	AATAAA	-15	NA	132079866	132073350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132073743_132077441_132077587_132079641
transcript_183784.known	chr9	-	11101	26	FSM	ENSG00000107290.14	ENST00000224140.6	11101	26	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_21	20.2118381153224	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGCCCTCCTTCCTAGC	-6	True	NA	83	True	TATAAA	-16	NA	132354986	132261355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132264986_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
transcript_183792.known	chr9	-	3143	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	22.1494920934996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-10	True	NA	64	True	ATTAAA	-42	NA	132406840	132375547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
transcript_183794.known	chr9	-	1780	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	45.0777106783386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-21	True	NA	64	True	ATTAAA	-42	NA	132406851	132375547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
transcript_183800.known	chr9	+	1725	6	FSM	ENSG00000188523.9	ENST00000393216.3	1725	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.54400902933387	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCTCCATTTGAA	1	True	NA	18	True	ATTAAA	-20	NA	132410210	132573319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_132410467_132498694_132498795_132499371_132499601_132537600_132537707_132542945_132543048_132572387
transcript_183803.known	chr9	-	2814	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-44	1389	-44	-1389	multi-exon	FALSE	canonical	3	52	junction_3	17.6063448648885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATCACTAATTATT	-15	True	NA	-25	True	AAAAAG	-5	NA	132670027	132594385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_183809.known	chr9	-	1333	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	36.3428886517783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTGAGTCTGTG	1	False	NA	-1	True	AATAAA	-24	NA	132670401	132658080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_183814.known	chr9	+	8612	5	FSM	ENSG00000125484.12	ENST00000372146.5	8612	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	11.8110118110177	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCGTGTCTGTTTTATG	-30	True	NA	13	True	AATAAA	-18	NA	132670463	132694953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_132670956_132677976_132679804_132683562_132683694_132687238_132687328_132688880
transcript_183820.known	chr9	-	1579	13	FSM	ENSG00000165695.10	ENST00000298545.4	1579	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.03026742978125	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTACGTCCTGAAGGTG	-3	True	NA	NA	False	AATAAA	-16	NA	132878284	132725577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132725926_132727453_132727535_132792633_132792776_132814637_132814728_132823204_132823337_132826853_132827055_132828012_132828085_132828644_132828727_132854856_132854926_132863664_132863779_132866903_132866954_132875114_132875200_132878171
transcript_183824.known	chr9	+	2536	4	FSM	ENSG00000165698.16	ENST00000372136.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTGACTTGGTTTCC	NA	False	NA	5	True	AATAAA	-17	NA	132878026	132890031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_132878437_132883910_132884092_132887368_132887572_132888289
transcript_183826.known	chr9	-	3953	23	FSM	ENSG00000165699.15	ENST00000643583.1	3953	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	32.5679518484553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTCCTCAGTAGCTTTA	0	True	NA	-13	True	NA	NA	NA	132944615	132895977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903803_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_183827.known	chr9	-	8582	23	FSM	ENSG00000165699.15	ENST00000646625.1	8582	23	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	28.4229057319609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	755	False	NA	-6	True	AATAAA	-16	NA	132944633	132891352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_183835.known	chr9	-	8715	23	FSM	ENSG00000165699.15	ENST00000644097.1	8715	23	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	29.9127173816928	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	619	False	NA	-6	True	AATAAA	-16	NA	132944769	132891352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_183837.known	chr9	-	5732	21	FSM	ENSG00000165699.15	ENST00000645901.1	5732	21	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	28.0925256963485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAACTTGGCTTTCCT	757	False	NA	NA	False	NA	NA	NA	132944631	132894848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_183838.known	chr9	-	3693	22	FSM	ENSG00000165699.15	ENST00000646391.1	3693	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	32.5817304788701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTTTCCTGTTTCCAG	755	False	NA	NA	False	NA	NA	NA	132944633	132896166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132928766_132928953_132935032_132935096_132944542
transcript_183851.known	chr9	-	1787	12	FSM	ENSG00000165699.15	ENST00000647462.1	1787	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.2375595072173	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACGATCATGGCTCACTG	-1	True	NA	NA	False	NA	NA	NA	132944616	132910260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_183852.known	chr9	-	2232	12	FSM	ENSG00000165699.15	ENST00000645150.1	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	26.4002880024361	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	755	False	NA	-4	True	AATAAA	-19	NA	132944633	132909806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_183855.known	chr9	-	1717	10	FSM	ENSG00000165699.15	ENST00000403810.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	23.1420732769464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCTTAGGTTGGATT	755	False	NA	NA	False	AGTAAA	-20	NA	132944633	132910998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_183857.known	chr9	+	2110	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	160.067599356136	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	6	True	NA	25	True	ATTAAA	-14	NA	133031003	133058501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
transcript_183871.known	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_8	52.4329095130148	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	-1	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_183876.nic	chr9	+	2168	11	NIC	ENSG00000148308.18	novel	1999	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	142.636636247494	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030670	133058501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_133030911_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_18388.known	chr1	+	5919	10	FSM	ENSG00000162769.13	ENST00000366971.9	5919	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	61.1769342477262	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	-6	True	NA	19	True	AATAAA	-19	NA	212858274	212899363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212859191_212863724_212863870_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_183897.known	chr9	+	1999	9	FSM	ENSG00000148308.18	ENST00000372099.10	1999	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	171.331139536863	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030674	133058501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133031165_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_183916.known	chr9	-	3598	18	FSM	ENSG00000160271.16	ENST00000372047.7	3598	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	31.2273724307271	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	9964	False	NA	NA	False	ATTAAA	-18	NA	133121176	133097719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133120971
transcript_183917.nic	chr9	-	3662	18	NIC	ENSG00000160271.16	novel	3801	18	NA	NA	101	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_15	16.4289389371948	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTCATTACAGTTT	-30	True	NA	NA	False	ATTAAA	-16	NA	133149233	133097721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
transcript_183918.known	chr9	-	3696	18	FSM	ENSG00000160271.16	ENST00000372050.8	3696	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	32.9358188920507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTCATTACAGTTT	1	True	NA	NA	False	ATTAAA	-16	NA	133121240	133097721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133120971
transcript_183919.known	chr9	-	3801	18	FSM	ENSG00000160271.16	ENST00000393160.7	3801	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	19.8520479101873	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	82	False	NA	NA	False	ATTAAA	-18	NA	133149334	133097719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133148962
transcript_183924.nic	chr9	-	3514	18	NIC	ENSG00000160271.16	novel	3801	18	NA	NA	157	-92	combination_of_known_junctions	FALSE	canonical	3	73	junction_15	16.4289389371948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTACTGATTGGGG	26	True	NA	NA	False	TATAAA	-21	NA	133149177	133097813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
transcript_183934.known	chr9	-	1954	7	FSM	ENSG00000148288.13	ENST00000372040.9	1954	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.74926894959167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGGGTGATTTTTTTTGT	-5	True	NA	-20	True	AATAAA	-22	NA	133163914	133152947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_183935.known	chr9	-	847	7	FSM	ENSG00000148288.13	ENST00000372038.7	847	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	5.30461015427985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATGGAGACCATCAGCCA	57	False	NA	NA	False	NA	NA	NA	133163897	133154074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156103_133161466_133161533_133162341_133162533_133163753
transcript_183936.known	chr9	-	1512	7	FSM	ENSG00000148288.13	ENST00000646215.1	1512	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.21966296705739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGTGCACACAGTAGC	-5	True	NA	NA	False	NA	NA	NA	133163914	133153426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133154262_133155177_133155350_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_183937.known	chr9	-	1935	7	FSM	ENSG00000148288.13	ENST00000372043.7	1935	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.94694069321861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCTAGGGTGATTTTT	-10	True	NA	-25	True	AATAAA	-17	NA	133163919	133152952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133154243_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_183939.known	chr9	-	2870	6	FSM	ENSG00000148288.13	ENST00000470431.5	2870	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	4.4988887516808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCTAGGGTGATTTTT	-10	True	NA	-25	True	AATAAA	-17	NA	133163919	133152952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_18395.known	chr1	+	1108	9	FSM	ENSG00000162769.13	ENST00000419102.1	1108	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	115.472331642693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCCTTGGAGAGAGAT	606	False	NA	-62	True	NA	NA	NA	212858915	212895334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212859191_212863724_212863870_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_183951.known	chr9	-	4235	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	0	0	0	multi-exon	TRUE	canonical	3	337	junction_3	18.2397231338636	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGATTTAATTCAG	5	True	NA	NA	False	AATAAA	-18	NA	133336188	133328775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
transcript_183964.known	chr9	-	4367	5	FSM	ENSG00000148297.16	ENST00000610672.4	4367	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	177.372489411408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	8768	False	NA	NA	False	NA	NA	NA	133347703	133338322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347159
transcript_183965.known	chr9	-	4044	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	113.19755960267	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAGAAATTA	-42	True	NA	NA	False	NA	NA	NA	133348131	133338311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
transcript_183973.known	chr9	-	3867	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	15.1070255914995	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-28	True	NA	-9	True	ATTAAA	-20	NA	133348117	133340904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
transcript_183974.known	chr9	-	561	4	FSM	ENSG00000148297.16	ENST00000457204.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	169.393690030716	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGACCGGAAGCTCATCAC	-42	True	NA	NA	False	NA	NA	NA	133348131	133344204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347941
transcript_183976.known	chr9	-	879	3	FSM	ENSG00000148297.16	ENST00000471524.1	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	203.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGGGATGCAATTCCAT	14	True	NA	NA	False	NA	NA	NA	133348075	133343689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133344334_133345171_133345253_133347921
transcript_183981.known	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	926.621204777258	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_183985.known	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	1753.5977245628	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	-1	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_183991.known	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	972.771470250507	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
transcript_184.known	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9244.75309212609	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
transcript_1840.nnic	chr1	-	1675	12	NNC	ENSG00000116213.16	novel	1692	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	60.3366588128164	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-18	True	NA	-3	True	AATAAA	-20	NA	3650107	3630769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_3631118_3631465_3631658_3632212_3632318_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_184004.known	chr9	-	1092	9	FSM	ENSG00000148290.10	ENST00000371974.8	1092	9	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_8	51.5156226304215	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTCCCAAAACTTGAT	-16	True	NA	46	True	CATAAA	-25	NA	133356487	133351757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356399
transcript_184006.known	chr9	-	991	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	190.997275330496	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-14	True	NA	-1	True	TATAAA	-25	NA	133356485	133351804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
transcript_184017.known	chr9	+	833	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_5	50.7290843599606	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	-19	True	NA	16	True	AATAAA	-16	NA	133356549	133361158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_184019.nic	chr9	+	969	6	NIC	ENSG00000148291.10	novel	833	6	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_2	235.109846667467	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	2	True	NA	16	True	AATAAA	-16	NA	133356527	133361158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_133356671_133356913_133357183_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_184032.known	chr9	-	2930	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_2	34.424409944108	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATCCTATAGCG	0	True	NA	-15	True	AATAAA	-18	NA	133376060	133361463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_184035.known	chr9	-	2863	5	FSM	ENSG00000148248.14	ENST00000545297.5	2863	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	606.793416246419	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	NA	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133363760_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_184051.known	chr9	-	2326	8	FSM	ENSG00000148300.12	ENST00000371942.8	2326	8	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_5	17.0605165364298	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGGAGGCTCAG	7	True	NA	-37	True	AATAAA	-20	NA	133418010	133406061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133417619
transcript_184053.known	chr9	-	833	6	FSM	ENSG00000148300.12	ENST00000454825.1	833	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	141.726497169725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACAGGCGCCCCCTGCTG	5	True	NA	NA	False	NA	NA	NA	133417977	133407005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133414664_133414834_133417619
transcript_184057.nic	chr9	-	516	2	ISM	ENSG00000148300.12	ENST00000371942.8	2326	8	-26	8851	-26	-2550	5prime_fragment	FALSE	canonical	3	300	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCTCGCCTCAAGTGAA	5	True	NA	NA	False	AAAAAG	-31	NA	133418036	133414912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_133415012_133417619
transcript_18406.nnic	chr1	+	1868	4	NNC	ENSG00000282718.1	novel	554	3	NA	NA	-254	2811	intron_retention	FALSE	canonical	3	25	junction_3	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCTTTCTCATGTTTA	6054	False	NA	25	True	AATAAA	-19	NA	212916532	212920388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212917201_212917359_212917705_212918335_212918387_212919584
transcript_184060.known	chr9	+	689	6	FSM	ENSG00000160325.15	ENST00000474734.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	39.9879981994598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCGCGGAGACCCTGG	-10	True	NA	NA	False	NA	NA	NA	133459986	133468619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133465034_133465159_133465321_133465448_133467920_133468029_133468562
transcript_184062.known	chr9	+	2880	6	FSM	ENSG00000160325.15	ENST00000540581.5	2880	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	36.1861852092757	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGCCTGTGTGTGAGT	NA	False	NA	43	True	AATAAA	-43	NA	133459964	133470787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468339_133468465_133468562
transcript_184066.known	chr9	+	2803	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	10.4880884817015	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	-19	True	NA	104	True	NA	NA	NA	133459977	133470848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
transcript_184069.nnic	chr9	+	2809	5	NNC	ENSG00000160325.15	novel	2803	5	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	30.0613955098562	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTCTGCCTTGGTGCCT	-20	True	NA	33	True	AATAAA	-33	NA	133459976	133470777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_133460188_133463406_133463556_133465321_133465448_133467920_133468029_133468562
transcript_184074.known	chr9	+	2688	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	29.743346594939	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	NA	False	NA	104	True	NA	NA	NA	133459966	133470848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
transcript_184082.known	chr9	-	2491	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	40.4557371291967	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCGAGGAAAGAGTG	-1	True	NA	-15	True	AATAAA	-16	NA	133479099	133471093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_184107.known	chr9	-	2301	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.6920851810221	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTAGCGAGGAAAGAGT	2	True	NA	-16	True	AATAAA	-15	NA	133479096	133471094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_184110.nic	chr9	-	3032	9	NIC	ENSG00000160326.14	novel	2491	10	NA	NA	-9	-120	intron_retention	FALSE	canonical	3	97	junction_5	17.0545998194036	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGCAAAGGACCTGGC	-8	True	NA	NA	False	NA	NA	NA	133479136	133471214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133476337_133477034_133477242_133478253_133478417_133478967
transcript_18413.known	chr1	+	4224	9	FSM	ENSG00000143494.16	ENST00000366968.8	4224	9	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	213.898303815154	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	0	True	NA	23	True	AATAAA	-19	NA	212950593	212991585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_184172.known	chr9	-	3417	8	FSM	ENSG00000160326.14	ENST00000485978.1	3417	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	42.9308889319776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTAGCGAGGAAAGAGT	2	True	NA	-16	True	AATAAA	-15	NA	133479096	133471094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133472177_133473104_133473251_133473414_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253
transcript_184173.known	chr9	+	3725	19	FSM	ENSG00000197859.11	ENST00000393060.1	3725	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.55951876084647	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGGGGTCTCAGTTGCC	36	False	NA	9	True	AATAAA	-21	NA	133534852	133575518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133534918_133536562_133536803_133537404_133537548_133538348_133538425_133539770_133539874_133540597_133540744_133540877_133541002_133544469_133544551_133547037_133547214_133554356_133554694_133555557_133555931_133561197_133561296_133566935_133567063_133568272_133568487_133568602_133568759_133569407_133569579_133570330_133570508_133573842_133573988_133574745
transcript_184175.known	chr9	-	2778	3	FSM	ENSG00000196990.9	ENST00000673969.1	2778	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGCAGCGTCTTCCG	25	False	133609414	-5	True	AATAAA	-13	NA	133609389	133577080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133579430_133580130_133580247_133609076
transcript_184177.known	chr9	-	3215	21	FSM	ENSG00000123453.19	ENST00000439388.6	3215	21	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_7	6.79613860953409	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGAAGCAAATAGGCTTC	-8	True	NA	-20	True	AGTAAA	-25	NA	133738352	133663559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133685192_133685287_133690379_133690528_133694257_133694372_133696222_133696362_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734204_133738253
transcript_184178.known	chr9	-	4691	27	FSM	ENSG00000160293.17	ENST00000406606.7	4691	27	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_12	21.9256746099314	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTCAGCCTTTCGTA	557	False	NA	-2	True	AATAAA	-19	NA	133992281	133761893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133764110_133768441_133768597_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
transcript_184190.known	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	37.3535708627481	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-4	True	NA	37	True	AATAAA	-26	NA	134068026	134030304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_1842.known	chr1	-	1692	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	17.1955212312167	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-14	True	NA	-3	True	AATAAA	-20	NA	3650103	3630769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_184206.nic	chr9	-	1718	9	ISM	ENSG00000169925.17	ENST00000303407.12	5661	12	-57	9906	-57	-4183	5prime_fragment	FALSE	canonical	3	197	junction_4	24.8193472919817	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGGAGAAGAAGG	443	False	NA	-41	True	AGTAAA	-10	NA	134068083	134040210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_184216.known	chr9	+	5682	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	-4	True	NA	NA	False	ATTAAA	-17	NA	134025480	134031587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134025537_134025844_134026091_134026207
transcript_184217.known	chr9	+	2300	2	FSM	ENSG00000235106.10	ENST00000432807.1	2300	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCCTCACACTTATT	10	True	NA	17	True	AATAAA	-19	NA	134025494	134028102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134025537_134025844
transcript_184233.known	chr9	+	3157	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	33.7596797427251	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	-6	True	NA	23	True	AATAAA	-19	NA	134136081	134159968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
transcript_18424.nnic	chr1	+	775	7	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	9	-1748	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_6	329.10505752554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTCATCCCTTT	10	True	NA	10	True	AATAAA	-20	NA	212950603	212971170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212971037
transcript_184252.known	chr9	+	8442	66	FSM	ENSG00000130635.16	ENST00000371817.8	8442	66	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	20.7234024302001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGAGTGACTCTCTT	11	True	NA	6	True	AATAAA	-26	NA	134641802	134844843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134642297_134690911_134691080_134699908_134700123_134701170_134701334_134727265_134727398_134728669_134728808_134730235_134730476_134731495_134731664_134732070_134732128_134738473_134738516_134738745_134738809_134750541_134750617_134750789_134750883_134752588_134752646_134753849_134753904_134754272_134754327_134756764_134756819_134758242_134758297_134761924_134761979_134763692_134763738_134765680_134765735_134766453_134766499_134766999_134767054_134767309_134767355_134768409_134768464_134772789_134772835_134774858_134774913_134780101_134780147_134782666_134782721_134784988_134785097_134785994_134786049_134789154_134789209_134795081_134795127_134795261_134795316_134796373_134796419_134796847_134796902_134798407_134798462_134801953_134802008_134802887_134802996_134804974_134805065_134805160_134805215_134806188_134806297_134809182_134809291_134810254_134810309_134811338_134811393_134811491_134811600_134812448_134812503_134812604_134812713_134813982_134814037_134814796_134814905_134815575_134815630_134815934_134815989_134817025_134817080_134817777_134817832_134818655_134818764_134818847_134818902_134818999_134819054_134820115_134820224_134822096_134822151_134822997_134823034_134823415_134823470_134824599_134824856_134825791_134825905_134829975_134830045_134834970_134835205_134842156
transcript_184254.nic	chr9	+	2757	2	ISM	ENSG00000130635.16	ENST00000618395.4	8437	66	-79	151743	-77	-16130	5prime_fragment	FALSE	canonical	3	25	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCCTTCCAGCAGT	-3	True	NA	NA	False	AAAAAG	-14	NA	134641725	134693097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_134642297_134690911
transcript_184255.known	chr9	+	2591	6	FSM	ENSG00000130558.20	ENST00000252854.8	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	67.5899400798669	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCACTTGTCA	15	False	NA	11	True	AATAAA	-13	NA	135075519	135121178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
transcript_184257.known	chr9	+	1014	4	FSM	ENSG00000130558.20	ENST00000277415.15	1014	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	97.7036335045939	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTTCTGAGGACTGT	78	False	NA	13	True	AATAAA	-17	NA	135075421	135098107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135097780
transcript_184259.known	chr9	+	568	2	FSM	ENSG00000130558.20	ENST00000371801.4	568	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGGTATTCTCCATT	108	False	NA	12	True	AATAGA	-9	NA	135075665	135076487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135075803_135076056
transcript_184263.nic	chr9	+	4775	4	NIC	ENSG00000196422.11	novel	936	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	47.932823363073	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	-19	True	NA	16	True	AATAAA	-16	NA	135479659	135488892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_135479725_135482682_135482816_135483949_135484083_135484448
transcript_184264.known	chr9	+	4951	4	FSM	ENSG00000196422.11	ENST00000356818.7	4951	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	18.7320284243028	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	-10	True	NA	16	True	AATAAA	-16	NA	135479781	135488892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135480023_135482682_135482816_135483949_135484083_135484448
transcript_184266.nic	chr9	+	5138	3	NIC	ENSG00000196422.11	novel	936	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_1	39	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	-16	True	NA	16	True	AATAAA	-16	NA	135479662	135488892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_135479725_135482682_135482816_135483949
transcript_184267.known	chr9	+	4640	3	FSM	ENSG00000196422.11	ENST00000604351.5	4640	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	77.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTTCTTTTTAAATC	-16	True	NA	17	True	AATAAA	-17	NA	135479662	135488893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135479725_135483949_135484083_135484448
transcript_184268.nnic	chr9	+	4654	3	NIC	ENSG00000196422.11	novel	4951	4	NA	NA	164	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	74	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	154	False	NA	16	True	AATAAA	-16	NA	135479945	135488892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_135480023_135483949_135484083_135484448
transcript_18427.known	chr1	+	1206	7	FSM	ENSG00000143494.16	ENST00000366967.6	1206	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	238.719966115577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGAACTTTTG	23	False	NA	NA	False	AGTAAA	-10	NA	212950666	212988924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212950741_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_184270.known	chr9	+	928	5	FSM	ENSG00000122140.11	ENST00000488610.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	255.141504855639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTCTCCGCTGGCTGTG	6	True	NA	NA	False	NA	NA	NA	135500698	135503960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135502068_135502267_135503541
transcript_184271.known	chr9	+	881	5	FSM	ENSG00000122140.11	ENST00000485333.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	256.736245980189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACCTCTACTGCAGGC	14	True	NA	NA	False	NA	NA	NA	135500706	135503976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503135_135503279_135503541
transcript_184272.known	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	42.5910788780937	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	-11	True	NA	12	True	AATAAA	-22	NA	135500681	135504671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
transcript_184275.known	chr9	+	551	4	FSM	ENSG00000122140.11	ENST00000462948.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	271.023984178522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAGACAGCCACGCAC	22	False	NA	NA	False	NA	NA	NA	135500714	135503594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135500754_135500997_135501327_135501843_135501974_135503541
transcript_184279.known	chr9	-	1278	3	FSM	ENSG00000160345.13	ENST00000371789.7	1278	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	96	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	1232	False	NA	-1	True	ATTAAA	-19	NA	135500518	135495180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_135495570_135498584_135498664_135499708
transcript_184280.known	chr9	-	675	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	6.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	1	True	NA	-1	True	ATTAAA	-19	NA	135499869	135495180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_135495616_135498584_135498664_135499708
transcript_184295.known	chr9	-	1860	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_3	40.205337155687	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTTCGTCTTTTC	-18	True	NA	-7	True	AATAAA	-14	NA	135961373	135932968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_184305.known	chr9	-	6903	6	FSM	ENSG00000148411.8	ENST00000277554.4	6903	6	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_5	8.87693640846886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTGGACTTGGCTTGG	-7	True	NA	0	True	AATAAA	-17	NA	136095289	136006536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136012025_136013198_136013297_136013863_136013970_136016264_136016430_136049635_136050581_136095188
transcript_184310.nnic	chr9	-	2406	5	NNC	ENSG00000148411.8	novel	6802	5	NA	NA	-1697	3638	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	16.0779351908135	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGAGGCAAATTCTGT	NA	False	NA	NA	False	AAAAAG	-22	NA	136052277	136012652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_136013297_136013863_136013970_136016264_136016430_136049635_136050581_136051731
transcript_184311.nic	chr9	-	2000	5	ISM	ENSG00000148411.8	ENST00000277554.4	6903	6	-39	6116	-39	3638	5prime_fragment	FALSE	canonical	3	28	junction_4	9.90896059130321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGAGGCAAATTCTGT	NA	False	NA	NA	False	AAAAAG	-22	NA	136095328	136012652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_136013297_136013863_136013970_136016264_136016430_136049635_136050581_136095188
transcript_184316.known	chr9	-	1981	3	FSM	ENSG00000238227.8	ENST00000557985.2	1981	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	112.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAGTGATTGCTTAA	350	False	NA	-35	True	ATTAAA	-18	NA	136118534	136114588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136114951_136115455_136117025_136118484
transcript_184321.known	chr9	-	648	2	FSM	ENSG00000238227.8	ENST00000447934.1	648	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTCGACGTGTACATC	610	False	NA	NA	False	NA	NA	NA	136118274	136116785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136117025_136117865
transcript_184322.known	chr9	-	2827	2	FSM	ENSG00000238227.8	ENST00000418388.6	2827	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAGTGATTGCTTAA	9	True	NA	-35	True	ATTAAA	-18	NA	136118875	136114588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136117025_136118484
transcript_184323.known	chr9	-	4501	12	FSM	ENSG00000165661.17	ENST00000358701.10	4501	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	8.70166698193299	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTCTTTTGAAATGT	4	True	NA	NA	False	AATAAA	-22	NA	136245812	136206332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136209276_136211263_136211453_136215153_136215305_136216599_136216723_136218678_136218809_136219029_136219165_136221795_136221942_136223762_136223854_136224006_136224113_136224860_136224910_136226773_136226875_136245475
transcript_184326.known	chr9	+	3566	14	FSM	ENSG00000160360.13	ENST00000440944.6	3566	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_12	8.82841029870989	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCGTATGGGCTTAG	1	True	NA	17	True	AATAAA	-15	NA	136327538	136359601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136327764_136334446_136334669_136335965_136336102_136336920_136337073_136337440_136337565_136337845_136337962_136338554_136338711_136339706_136339816_136340869_136340994_136348696_136348768_136349586_136349764_136355689_136355847_136356341_136356551_136358013
transcript_184331.known	chr9	-	3096	3	FSM	ENSG00000213221.5	ENST00000371738.4	3096	3	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	22	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCGGGGGGGCGCTACG	-16	True	NA	NA	False	AATAAA	-18	NA	136363744	136359482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136362181_136362988_136363129_136363486
transcript_184332.known	chr9	+	2114	3	FSM	ENSG00000160360.13	ENST00000291775.3	2114	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	8	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCGTATGGGCTTAG	63	False	NA	17	True	AATAAA	-15	NA	136355529	136359601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136355847_136356341_136356551_136358013
transcript_184333.known	chr9	+	2270	9	FSM	ENSG00000160360.13	ENST00000616132.4	2270	9	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_4	7.45716936913733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGGCCTCACTATGTTG	46	False	NA	NA	False	ATTAAA	-13	NA	136327475	136341836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136327764_136334446_136334669_136335965_136336102_136336920_136337073_136337440_136337565_136337845_136337962_136338554_136338711_136339706_136339816_136340869
transcript_18434.nnic	chr1	+	824	6	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	9	-1748	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_5	392.378184918581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTCATCCCTTT	10	True	NA	10	True	AATAAA	-20	NA	212950603	212971170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961361_212966270_212966346_212971037
transcript_184354.nnic	chr9	-	4657	24	NNC	ENSG00000165684.6	novel	4693	24	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_7	25.994837352792	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	-18	True	NA	-9	True	AATAAA	-21	NA	136400224	136375576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136381990_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_184361.nic	chr9	-	4741	24	FSM	ENSG00000165684.6	ENST00000684778.1	4693	24	-54	6	-48	0	multi-exon	FALSE	canonical	3	42	junction_11	21.4221234335151	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	-18	True	NA	-9	True	AATAAA	-21	NA	136400224	136375576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_184365.nnic	chr9	-	4713	24	NIC	ENSG00000165684.6	novel	4693	24	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	23.6532128927812	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	-18	True	NA	-9	True	AATAAA	-21	NA	136400224	136375576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387512_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_184419.known	chr9	-	2314	9	FSM	ENSG00000165689.17	ENST00000298537.11	2314	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_8	118.131282901694	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTCTTCTCTGCTG	4	True	NA	-13	True	AATAAA	-15	NA	136410609	136401924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410089_136410240_136410327
transcript_18442.nnic	chr1	+	579	4	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	9	474	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_3	396.548441765526	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACTTCTCAGTGTGAA	10	True	NA	12	True	AATGAA	-15	NA	212950603	212952286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212952128
transcript_184420.nnic	chr9	-	2064	9	NNC	ENSG00000165689.17	novel	2391	10	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	146.615941749184	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTCTCTGCTGACT	8	True	NA	-10	True	AATAAA	-18	NA	136410605	136401921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410327_136410383_136410481
transcript_184423.known	chr9	-	2129	8	FSM	ENSG00000165689.17	ENST00000371725.7	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	96.5249254052537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTAATAAATTCTGTAG	13	True	NA	-39	True	TTTAAA	-36	NA	136410600	136401950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410327
transcript_184431.known	chr9	+	2086	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_6	100.902145941281	2218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	-3	True	NA	27	True	AATAAA	-19	NA	136410657	136423761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_18444.nic	chr1	+	1612	4	NIC	ENSG00000143494.16	novel	4224	9	NA	NA	-10	809	combination_of_known_junctions	FALSE	canonical	3	81	junction_3	391.017760324117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTAGTCTTGGTTGTA	-10	True	NA	11	True	AGTAAA	-13	NA	212950583	212953600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_212950741_212951338_212951393_212951588_212951819_212952429
transcript_184449.nic	chr9	+	2680	12	NIC	ENSG00000165688.12	novel	2086	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	930	junction_6	77.1695567945532	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	NA	False	NA	27	True	AATAAA	-19	NA	136410622	136423761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_184467.known	chr9	+	416	3	FSM	ENSG00000165688.12	ENST00000619192.4	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_2	56	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGATGTTTGAGATTT	0	True	NA	NA	False	NA	NA	NA	136410643	136412606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136410740_136411996_136412200_136412489
transcript_184470.nnic	chr9	-	3621	10	NNC	ENSG00000148384.14	novel	3417	10	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	29.6535551550456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	7339	False	NA	-13	True	AATAAA	-22	NA	136439886	136428618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432315_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
transcript_184471.known	chr9	-	3417	10	FSM	ENSG00000148384.14	ENST00000371712.4	3417	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	13.5409757658508	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-23	True	NA	-13	True	AATAAA	-22	NA	136439845	136428618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
transcript_184475.nic	chr9	-	4215	9	NIC	ENSG00000148384.14	novel	3417	10	NA	NA	-41	0	intron_retention	FALSE	canonical	3	65	junction_5	13.6930639376292	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	7339	False	NA	-13	True	AATAAA	-22	NA	136439886	136428618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432587_136432955_136433076_136433154_136434135_136434739_136434864_136438607
transcript_184481.nic	chr9	-	3951	9	NIC	ENSG00000148384.14	novel	3417	10	NA	NA	-41	0	intron_retention	FALSE	canonical	3	65	junction_4	13.5686909832894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	7339	False	NA	-13	True	AATAAA	-22	NA	136439886	136428618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
transcript_184494.known	chr9	-	4311	1	FSM	ENSG00000148384.14	ENST00000635815.1	4311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTG	-1	True	NA	NA	False	AATAAA	-17	NA	136439823	136435512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136435500_136439800
transcript_1845.known	chr1	-	1998	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	15.1208465371486	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	9111	False	NA	0	True	AATAAA	-23	NA	3650058	3630766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_184501.nnic	chr9	+	2351	4	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-68	-150	intron_retention	FALSE	canonical	2	3	junction_1	4.18993502999218	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGGTTGGGCATTTTT	NA	False	NA	7	True	TATAAA	-16	NA	136546143	136549743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136547558_136547841_136548102_136548743_136548809_136549131
transcript_184506.nnic	chr9	+	2613	3	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-46	-150	intron_retention	FALSE	canonical	3	6	junction_1	3.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGGTTGGGCATTTTT	1	True	NA	7	True	TATAAA	-16	NA	136546165	136549743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136548102_136548743_136548809_136549131
transcript_184507.nnic	chr9	+	3315	2	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-68	-151	intron_retention	FALSE	canonical	2	3	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGAGGTTGGGCATTTT	NA	False	NA	6	True	TATAAA	-15	NA	136546143	136549742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136547558_136547841
transcript_184512.known	chr9	+	1282	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	125.708927188963	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	12	True	NA	11	True	AATAAA	-13	NA	136665791	136672678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
transcript_184535.known	chr9	-	1546	6	FSM	ENSG00000169692.13	ENST00000371696.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	2	364	junction_5	41.725771412881	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-4	True	NA	-5	True	TATAAA	-19	NA	136687457	136673142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
transcript_184542.nic	chr9	-	1851	5	NIC	ENSG00000169692.13	novel	1546	6	NA	NA	-19	0	intron_retention	FALSE	canonical	2	364	junction_4	36.3077126792642	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-23	True	NA	-5	True	TATAAA	-19	NA	136687476	136673142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677557_136687175
transcript_184545.known	chr9	-	1391	5	FSM	ENSG00000169692.13	ENST00000371694.7	1391	5	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_2	180.06179494829	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	10	True	NA	-5	True	TATAAA	-19	NA	136687398	136673142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136673928_136674734_136674808_136676960_136677137_136677422_136677557_136687175
transcript_184548.known	chr9	-	1357	7	FSM	ENSG00000169692.13	ENST00000538402.1	1357	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	168.198956265754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTGGGGAGCTGTGG	12	True	NA	-12	True	TATAAA	-12	NA	136687396	136673149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136673279_136673399_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
transcript_184549.nnic	chr9	+	1671	6	NNC	ENSG00000165716.11	novel	2358	5	NA	NA	-55	0	intron_retention	FALSE	non_canonical	0	0	junction_1	194.786652520135	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGAGCCCCCATCGA	7	True	NA	28	True	AATAAA	-28	NA	136712516	136724050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136712598_136712647_136712729_136717576_136717712_136721920_136722029_136722124_136722302_136722961
transcript_184553.known	chr9	+	2358	5	FSM	ENSG00000165716.11	ENST00000371692.9	2358	5	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	53.5770473243907	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGTCTTAGGTTCCAG	14	True	NA	34	True	AATAAA	-40	NA	136712571	136724742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136712729_136717576_136717712_136721920_136722029_136722124_136722302_136722961
transcript_184557.known	chr9	-	789	5	FSM	ENSG00000233016.8	ENST00000416970.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	77.3284391411077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-2	True	NA	-18	True	ATTAAA	-14	NA	136728184	136724657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136724940_136725054_136725111_136726310_136726417_136727045_136727087_136727880
transcript_184558.known	chr9	-	1123	4	FSM	ENSG00000233016.8	ENST00000653276.1	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGCTGTTTCCTAG	4	True	NA	-99	True	GGGGCT	-14	NA	136728178	136724432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136725111_136726310_136726417_136727045_136727087_136727880
transcript_18456.known	chr1	-	4690	9	FSM	ENSG00000174606.14	ENST00000366962.8	4690	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	84.3118282034022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-9	True	NA	-12	True	AATAAA	-15	NA	213015867	212992181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_184561.known	chr9	-	1254	3	FSM	ENSG00000233016.8	ENST00000668354.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	277	False	NA	-18	True	ATTAAA	-14	NA	136727905	136724657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136725111_136726310_136727087_136727880
transcript_184562.known	chr9	-	2157	2	FSM	ENSG00000233016.8	ENST00000447221.1	2157	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	136728184	136725233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136727087_136727880
transcript_184565.known	chr9	-	1995	6	FSM	ENSG00000187922.14	ENST00000497771.6	1995	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.85657137141714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	0	True	NA	NA	False	AATAAA	-21	NA	136742940	136738169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136739554_136739949_136740049_136740835_136740944_136741251_136741362_136741880_136742021_136742786
transcript_184569.known	chr9	-	615	5	FSM	ENSG00000187922.14	ENST00000527229.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.9474565306379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	5564	False	NA	NA	False	NA	NA	NA	136742959	136739460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136739554_136739949_136740049_136741251_136741362_136741880_136742021_136742786
transcript_184570.known	chr9	-	443	4	FSM	ENSG00000187922.14	ENST00000532006.1	443	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	5564	False	NA	NA	False	NA	NA	NA	136742959	136739460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136739554_136739949_136740049_136741880_136741959_136742786
transcript_184571.known	chr9	-	1780	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	0	True	NA	NA	False	AATAAA	-24	NA	136742940	136738166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
transcript_184582.known	chr9	+	3078	15	FSM	ENSG00000196642.19	ENST00000371663.10	3078	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	180.080438376061	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACTCTGCGTGTGTCTG	32	False	NA	17	True	CATAAA	-10	NA	136807966	136841177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832261_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153_136840213_136840321
transcript_184591.nic	chr9	+	2282	14	ISM	ENSG00000196642.19	ENST00000311502.12	3104	15	-71	1002	-66	0	5prime_fragment	FALSE	canonical	3	502	junction_8	85.9727492259463	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAAAAAGG	0	True	NA	-14	True	NA	NA	NA	136807876	136840185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153
transcript_184598.nic	chr9	+	2252	13	ISM	ENSG00000196642.19	ENST00000311502.12	3104	15	-71	1320	-66	-318	5prime_fragment	TRUE	canonical	3	502	junction_8	89.4029579426145	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGGGCACCAGAGTGC	0	True	NA	NA	False	GGGGCT	-38	NA	136807876	136839867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693
transcript_18460.nic	chr1	-	2181	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_8	80.0546688207502	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	340	False	NA	10	True	AATATA	-26	NA	213015518	212994728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
transcript_184613.known	chr9	+	1580	8	FSM	ENSG00000196642.19	ENST00000371671.9	1580	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	218.247846378789	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	8	True	NA	20	True	AATAAA	-15	NA	136807942	136834340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136833719
transcript_184619.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	67.2997028225237	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	-12	True	NA	42	True	AAAACA	-30	NA	136791343	136793317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
transcript_184620.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	215.650759330914	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	12	True	NA	-19	True	AATAAA	-19	NA	136791367	136793256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
transcript_184624.known	chr9	+	683	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	254.467199370676	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	16	True	NA	-19	True	AATAAA	-19	NA	136791371	136793256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
transcript_184625.known	chr9	+	491	4	FSM	ENSG00000244187.8	ENST00000479737.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	291.218512842543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGCCGACCCTCCCCA	23	True	NA	NA	False	NA	NA	NA	136791378	136792902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791777_136792031_136792250_136792359_136792818
transcript_184627.known	chr9	+	3328	6	FSM	ENSG00000196642.19	ENST00000435930.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	43.050667822927	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAAAAAGG	NA	False	NA	-14	True	NA	NA	NA	136835170	136840185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153
transcript_18463.known	chr1	-	4323	8	FSM	ENSG00000174606.14	ENST00000360506.6	4323	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	100.802089385537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	32	False	NA	-12	True	AATAAA	-15	NA	213015826	212992181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213015612
transcript_184631.known	chr9	+	577	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	2758	junction_2	84	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	-5	True	NA	15	True	ATTAAA	-15	NA	136849408	136851024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136849591_136850012_136850138_136850754
transcript_184632.known	chr9	+	1316	3	FSM	ENSG00000054148.18	ENST00000492540.5	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	1294	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	310	False	NA	13	True	ATTAAA	-13	NA	136849090	136851022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136849591_136850012_136850561_136850754
transcript_184633.known	chr9	+	627	2	FSM	ENSG00000054148.18	ENST00000463215.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	2758	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	42	False	NA	13	True	ATTAAA	-13	NA	136849778	136851022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136850138_136850754
transcript_184634.known	chr9	-	662	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	2059	junction_1	198.308314248294	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-3	True	NA	-15	True	NA	NA	NA	136866308	136862118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_184637.known	chr9	-	790	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	886.712291276037	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-3	True	NA	-15	True	NA	NA	NA	136866285	136862118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_184640.known	chr9	-	809	4	FSM	ENSG00000107223.13	ENST00000371648.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	2435	junction_3	59.3314606446042	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGAGTGCTCGTGTGC	4	True	NA	NA	False	NA	NA	NA	136866266	136862489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136863000_136863287_136863449_136863819_136863872_136866180
transcript_184642.nnic	chr9	+	2649	14	NNC	ENSG00000127191.18	novel	2266	11	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	114.447838303341	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	4576	False	NA	12	True	ATTAAA	-14	NA	136886487	136926607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136886542_136889468_136889563_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_184646.nnic	chr9	+	2553	13	NIC	ENSG00000127191.18	novel	2266	11	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	107.869519945781	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	4578	False	NA	12	True	ATTAAA	-14	NA	136886489	136926607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_136886542_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_184652.known	chr9	+	2266	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	50.5787504788325	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	9	True	NA	12	True	ATTAAA	-14	NA	136886515	136926607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_184676.known	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_8	72.455913319756	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	1	True	NA	-1	True	AATAAA	-16	NA	136944738	136940434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_184685.nic	chr9	-	2366	9	NIC	ENSG00000159069.14	novel	2362	9	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	212.95363345104	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	5303	False	NA	-1	True	AATAAA	-16	NA	136944796	136940434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136941172_136941250_136941464_136941536_136941685_136942099_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_184704.known	chr9	-	2392	8	FSM	ENSG00000159069.14	ENST00000483559.5	2392	8	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_7	74.2172761668916	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	5411	False	136944705	-1	True	AATAAA	-16	NA	136944688	136940434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_184705.known	chr9	-	2339	8	FSM	ENSG00000159069.14	ENST00000459905.5	2339	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	223.932387755131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	9	True	NA	-1	True	AATAAA	-16	NA	136944696	136940434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942099_136942467_136942546_136942944_136943348_136943507_136943890_136944107_136944593
transcript_18473.known	chr1	-	851	3	FSM	ENSG00000174606.14	ENST00000481918.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	45	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGCAAAATATTATTG	-21	True	NA	NA	False	ATTAAA	-16	NA	213015493	213008209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_213008467_213013092_213013419_213015225
transcript_184743.known	chr9	+	881	7	FSM	ENSG00000176919.13	ENST00000371634.7	881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.74535599249993	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTCTTCTGTCCACT	-2	True	NA	NA	False	ATTAAA	-15	NA	136945242	136946975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136945459_136945633_136945771_136945928_136946000_136946084_136946193_136946464_136946567_136946650_136946690_136946767
transcript_184748.known	chr9	+	754	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	9.93176721434811	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	640	False	NA	-39	True	NA	NA	NA	136978811	136981692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_184754.known	chr9	-	809	6	FSM	ENSG00000169583.13	ENST00000494426.2	809	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	2.68328157299975	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTCTCGGGATCACTT	-3	True	NA	NA	False	AATAAA	-44	NA	136996568	136994607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136994840_136994929_136995106_136995185_136995293_136995441_136995568_136995647_136995758_136996510
transcript_184759.known	chr9	-	1475	9	FSM	ENSG00000107281.10	ENST00000371601.5	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_8	36.0277670693036	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGTGTTGCCAGC	18	True	NA	-34	True	ATTAAA	-20	NA	137046177	137039462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926_137043074_137045877
transcript_184767.known	chr9	-	2187	8	FSM	ENSG00000107281.10	ENST00000371600.7	2187	8	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	19.6375317456452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTTCTGCCTGTGT	9960	False	NA	-41	True	ATTAAA	-13	NA	137044092	137039469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926
transcript_184768.known	chr9	-	2102	9	FSM	ENSG00000054179.12	ENST00000355097.7	2102	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1.93245310421754	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGAAAGGAGAGTGTCT	-9	True	NA	-7	True	AATAAA	-15	NA	137054061	137048106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137048861_137048940_137049076_137049869_137049990_137050283_137050539_137050901_137051130_137051210_137051371_137051509_137051661_137052230_137052349_137053880
transcript_18477.known	chr1	+	4227	15	FSM	ENSG00000136643.12	ENST00000543470.5	4227	15	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_3	50.6006775787496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTTCTTCATTTAAT	-55	True	NA	18	True	AATAAA	-15	NA	213051232	213273464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_213051510_213071005_213071042_213072869_213072987_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_184773.known	chr9	-	3814	6	FSM	ENSG00000186193.9	ENST00000409687.5	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	13.6	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGTGGTATTTATAGT	5	True	NA	NA	False	AATAAA	-22	NA	137070557	137062126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
transcript_18478.known	chr1	+	5505	15	FSM	ENSG00000136643.12	ENST00000366960.8	5505	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	18.9693630545118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTCATTTGATTTTT	-47	True	NA	NA	False	CATAAA	-15	NA	213051240	213274774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_184784.known	chr9	+	3349	9	FSM	ENSG00000197355.11	ENST00000409858.8	3349	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	7.72981241687015	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	17	True	NA	30	True	AATAAA	-20	NA	137077516	137084538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137077822_137078049_137078255_137078501_137078678_137078975_137079149_137079255_137079450_137080001_137080143_137080688_137080875_137081997_137082065_137082636
transcript_184786.nnic	chr9	+	3077	8	NNC	ENSG00000197355.11	novel	3349	9	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	12.4605499927752	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	549	False	NA	30	True	AATAAA	-20	NA	137078048	137084538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_137078287_137078501_137078678_137078975_137079149_137079255_137079450_137080001_137080143_137080688_137080875_137081997_137082065_137082636
transcript_184789.known	chr9	-	1872	1	FSM	ENSG00000268996.3	ENST00000596585.3	1872	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGAGTTTCTCTTTA	-2	True	NA	-2	True	ATTAAA	-15	NA	137086817	137084945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137084900_137086800
transcript_184791.known	chr9	+	2891	14	FSM	ENSG00000177239.16	ENST00000684138.1	2891	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	112.651948666952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTTTTCGGTGGAGATA	974	False	NA	-14	True	NA	NA	NA	137086893	137109145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088267_137088399_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_184801.known	chr9	+	2698	13	FSM	ENSG00000177239.16	ENST00000684144.1	2698	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	121.459498279147	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGCGATGTCGCCTGTG	10	True	NA	21	True	GATAAA	-14	NA	137086984	137109180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096239_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106127_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_184802.known	chr9	+	2690	13	FSM	ENSG00000177239.16	ENST00000682117.1	2690	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	90.6084371837904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGTCGCCTGTGTCTTT	-10	True	NA	26	True	GATAAA	-19	NA	137086964	137109185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108426
transcript_184803.known	chr9	+	2698	13	FSM	ENSG00000177239.16	ENST00000682881.1	2698	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	89.8011305917445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTGTCTTTAGGG	937	False	NA	30	True	GATAAA	-23	NA	137086856	137109189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108530
transcript_184805.known	chr9	+	2755	13	FSM	ENSG00000177239.16	ENST00000683135.1	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	88.1247537427607	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAACCGCGATGTCGC	984	False	NA	16	True	GATAAA	-9	NA	137086903	137109175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
transcript_184811.known	chr9	+	3432	12	FSM	ENSG00000177239.16	ENST00000535144.6	3432	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.4861092932616	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	10	True	NA	24	True	GATAAA	-17	NA	137086984	137109183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530
transcript_184812.known	chr9	+	2792	12	FSM	ENSG00000177239.16	ENST00000684229.1	2792	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.865101066039	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATAAAAGTTGATTTG	-18	True	NA	-2	True	NA	NA	NA	137086956	137109157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107663_137108387
transcript_184813.known	chr9	+	2526	12	FSM	ENSG00000177239.16	ENST00000684366.1	2526	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	92.7552542451512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAAAAGTTGATTTGCT	-24	True	NA	0	True	NA	NA	NA	137086950	137109159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_184821.nic	chr9	+	1825	5	ISM	ENSG00000177239.16	ENST00000682210.1	3314	7	-152	3729	-33	-970	5prime_fragment	FALSE	canonical	3	303	junction_2	12.2142335003061	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATATATGTGTATATT	904	False	NA	NA	False	AAAAAG	-4	NA	137086823	137098856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827
transcript_184826.known	chr9	-	1601	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	20.7337620534453	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-16	True	NA	-6	True	AATAAA	-17	NA	137114733	137110545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_184833.nic	chr9	-	1709	13	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	-176	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	40.9254063985795	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	3410	False	NA	-6	True	AATAAA	-17	NA	137114909	137110545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111940_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_184837.nic	chr9	-	1921	12	ISM	ENSG00000176978.14	ENST00000371579.7	1601	13	-250	0	194	0	intron_retention	FALSE	canonical	3	105	junction_5	20.5526938171252	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	3336	False	NA	-6	True	AATAAA	-17	NA	137114983	137110545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462
transcript_18484.known	chr1	+	8468	5	FSM	ENSG00000117707.16	ENST00000366958.9	8468	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCTTTAGCTCAA	18	True	NA	NA	False	NA	NA	NA	213987972	214041510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_213988484_213996468_213998261_214005164_214005273_214011520_214011716_214035648
transcript_184844.nic	chr9	-	2291	12	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	-176	0	intron_retention	FALSE	canonical	3	128	junction_11	16.4653405071541	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	3410	False	NA	-6	True	AATAAA	-17	NA	137114909	137110545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_184847.nic	chr9	-	1757	12	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	-154	0	intron_retention	FALSE	canonical	3	22	junction_3	42.5586615088103	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	3432	False	NA	-6	True	AATAAA	-17	NA	137114887	137110545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111940_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462
transcript_184849.nic	chr9	-	2061	12	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	-14	0	intron_retention	FALSE	canonical	3	22	junction_3	41.2430810626121	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-30	True	NA	-6	True	AATAAA	-17	NA	137114747	137110545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111940_137112030_137112111_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_184856.nic	chr9	-	2196	11	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	130	junction_3	15.0136604464068	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-27	True	NA	-6	True	AATAAA	-17	NA	137114744	137110545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462
transcript_18488.known	chr1	+	1745	12	FSM	ENSG00000143499.14	ENST00000366957.10	1745	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	4.94097390607316	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	-33	True	NA	21	True	ATTAAA	-13	NA	214281158	214337131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
transcript_18489.known	chr1	+	4732	10	FSM	ENSG00000143499.14	ENST00000471645.5	4732	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	3.63453938528803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGGTTTGTATTTTCT	29	False	NA	20	True	ATTAAA	-12	NA	214281124	214337130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214334309_214336703
transcript_184899.known	chr9	-	1209	2	FSM	ENSG00000184709.7	ENST00000371542.3	1209	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGACATTCCTTTAGG	0	True	NA	0	True	NA	NA	NA	137170051	137168757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137169186_137169270
transcript_184916.known	chr9	-	2655	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	13.0647426304539	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	2	True	NA	-1	True	ATTAAA	-16	NA	137188560	137174783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_184927.nic	chr9	-	3791	12	NIC	ENSG00000176248.9	novel	2655	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	60	junction_5	12.7123288891188	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	-10	True	NA	-1	True	ATTAAA	-16	NA	137188572	137174783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137188104_137188415
transcript_18493.known	chr1	-	13360	19	FSM	ENSG00000152104.12	ENST00000366956.10	13360	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	9.8124385662935	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACATCTTCTCTTTTCTG	-16	True	NA	-5	True	AATAAA	-19	NA	214551602	214348699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_214358051_214364511_214364676_214369456_214369692_214372710_214372840_214376218_214376438_214377958_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
transcript_184932.nic	chr9	-	2750	12	NIC	ENSG00000176248.9	novel	2655	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	60	junction_4	13.5798830311787	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	-11	True	NA	-1	True	ATTAAA	-16	NA	137188573	137174783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_184947.known	chr9	+	723	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	337	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	-10	True	NA	18	True	AATAAA	-20	NA	137188705	137190370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137188779_137189065_137189152_137189806
transcript_184948.known	chr9	+	863	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	120.5	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	5	True	NA	14	True	AATAAA	-16	NA	137188675	137190366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137188779_137189065_137189266_137189806
transcript_184951.known	chr9	+	1170	2	FSM	ENSG00000176101.12	ENST00000459860.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	3	956	junction_1	0	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	-11	True	NA	18	True	AATAAA	-20	NA	137188659	137190370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137189266_137189806
transcript_184952.known	chr9	+	570	2	FSM	ENSG00000176101.12	ENST00000463511.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGGCCTGCCTCCGTG	-17	True	NA	NA	False	NA	NA	NA	137188698	137189923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137189152_137189806
transcript_184954.nic	chr9	-	2470	4	Fusion	ENSG00000187713.7_ENSG00000176058.13	novel	2659	4	NA	NA	-21	0	multi-exon	FALSE	canonical	3	10	junction_3	56.5763986914057	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCCCCACTGCG	-23	True	NA	-11	True	AATAAA	-16	NA	137205669	137191618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr9_-_137192175_137192258_137192366_137192450_137192692_137204103
transcript_184956.known	chr9	-	1567	1	FSM	ENSG00000187713.7	ENST00000343666.6	1567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTGGTTGCCTGTAA	-2	True	NA	NA	False	AATAAA	-23	NA	137205648	137204081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137204100_137205600
transcript_184957.known	chr9	-	3350	3	FSM	ENSG00000176058.13	ENST00000477345.1	3350	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	9	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCCCCACTGCG	5608	False	NA	-11	True	AATAAA	-16	NA	137195137	137191618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137192175_137192258_137192366_137192450
transcript_184959.known	chr9	+	2497	14	FSM	ENSG00000188566.15	ENST00000371521.8	2497	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	35.9119567700405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGCGCAGGCTTCCTT	-18	True	NA	27	True	AGTAAA	-21	NA	137205694	137217009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216066_137216189_137216271
transcript_184961.nic	chr9	+	2423	14	NIC	ENSG00000188566.15	novel	4817	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	36.7841939299602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCCTCTGGGTGGTTA	-13	True	NA	7	True	AGTAAA	-1	NA	137205699	137216989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216167_137216271
transcript_184963.known	chr9	+	4817	14	FSM	ENSG00000188566.15	ENST00000684003.1	4817	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	17.1574677101504	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	-13	True	NA	4	True	AATAAA	-15	NA	137205699	137219361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_184968.known	chr9	+	1829	14	FSM	ENSG00000188566.15	ENST00000458322.2	1829	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	37.1238133115781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCATCCTCCTGGGAGCC	37	True	NA	NA	False	NA	NA	NA	137205749	137216444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215427_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_184976.nic	chr9	+	5098	13	ISM	ENSG00000188566.15	ENST00000684003.1	4817	14	-198	0	-183	0	intron_retention	FALSE	canonical	3	92	junction_9	17.105067475264	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	NA	False	NA	4	True	AATAAA	-15	NA	137205501	137219361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093
transcript_18501.nic	chr1	-	3494	14	ISM	ENSG00000152104.12	ENST00000366956.10	13360	19	-232	29259	-232	-5713	5prime_fragment	FALSE	canonical	3	34	junction_3	8.59475552213134	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGGCTTGTCAA	NA	False	NA	NA	False	NA	NA	NA	214551834	214377958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
transcript_185011.known	chr9	+	1910	1	FSM	ENSG00000284976.1	ENST00000645271.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	NA	False	NA	4	True	AATAAA	-15	NA	137217451	137219361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137217500_137219400
transcript_185012.known	chr9	-	1077	1	NIC	ENSG00000212864.4	novel	1135	2	NA	NA	258	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGACTGAAGCTTGCTC	5397	False	NA	-1	True	ATTAAA	-26	NA	137221323	137220246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137220200_137221300
transcript_185013.known	chr9	+	762	2	FSM	ENSG00000197191.6	ENST00000650725.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTTTGCTGCAGGCTC	-1	True	NA	11	True	AATAAA	-25	NA	137225173	137226315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137225234_137225613
transcript_185014.known	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_1	40.2326567189723	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	0	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
transcript_185015.known	chr9	+	2035	3	FSM	ENSG00000188229.6	ENST00000604929.1	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_1	20	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTTTCGCTTTGCCCA	1	True	NA	20	True	ATTAAA	-14	NA	137241287	137243706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137241418_137241720_137241830_137241910
transcript_185025.known	chr9	+	2540	13	FSM	ENSG00000188986.9	ENST00000343053.6	2540	13	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_3	87.2056955326505	1058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAGGCTGAGATGTCTC	0	True	NA	15	True	AATAAA	-16	NA	137255326	137273542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137255612_137255906_137256071_137256328_137256429_137256823_137257055_137263036_137263223_137264244_137264358_137265876_137265980_137266330_137266427_137266943_137267087_137267239_137267347_137272080_137272223_137272506_137272616_137272781
transcript_18503.known	chr1	-	487	3	FSM	ENSG00000152104.12	ENST00000486173.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGCTGTCGGTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	214552449	214464701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_214464958_214551182_214551279_214552314
transcript_185065.known	chr9	+	4171	2	FSM	ENSG00000198113.3	ENST00000357503.3	4171	2	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTACTGTTTGGTTTGT	5	True	NA	24	True	AATAAA	-20	NA	137277725	137282641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137277908_137278652
transcript_185067.known	chr9	-	2781	22	FSM	ENSG00000187609.16	ENST00000340951.9	2781	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	23.5253517905843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTCACATGTTTCAT	20	True	NA	-1	True	AATAAA	-37	NA	137423162	137306895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137307264_137307607_137307647_137309606_137309701_137323724_137323857_137324089_137324144_137348070_137348239_137349109_137349283_137349368_137349532_137351037_137351148_137351317_137351529_137352065_137352202_137352619_137352787_137354338_137354378_137354699_137354774_137356267_137356369_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_185076.known	chr9	-	962	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	7.21958786771044	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	27	True	NA	-3	True	AATAAA	-14	NA	137423155	137366144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_18508.nic	chr1	+	2017	12	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	24412	-28	-14260	5prime_fragment	FALSE	canonical	3	138	junction_11	41.6619611668061	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATGAAGAATTGAAAGA	NA	False	NA	NA	False	AAAAAG	-4	NA	214603166	214640159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920
transcript_185080.nic	chr9	-	2514	6	NIC	ENSG00000187609.16	novel	1432	11	NA	NA	-62	0	intron_retention	FALSE	canonical	3	50	junction_5	4.40908153700972	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	NA	False	NA	-3	True	AATAAA	-14	NA	137423273	137366144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_185085.nnic	chr9	+	1772	14	NNC	ENSG00000188747.9	novel	1614	14	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_11	4.7976818860039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACCCTCCAAGTGGGT	NA	False	NA	7	True	AATAAA	-17	NA	137423346	137434406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_137423707_137426247_137426331_137427920_137428142_137428881_137429017_137429275_137429384_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204_137433264_137433452_137433608_137433749_137433865_137433964_137434080_137434223
transcript_185088.known	chr9	+	1614	14	FSM	ENSG00000188747.9	ENST00000683555.1	1614	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	4.70049726690837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACCCTCCAAGTGGGT	-17	True	NA	7	True	AATAAA	-17	NA	137423392	137434406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137423707_137426247_137426331_137428032_137428142_137428881_137429017_137429275_137429384_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204_137433264_137433452_137433608_137433749_137433865_137433964_137434080_137434223
transcript_185107.nnic	chr9	-	2961	16	NNC	ENSG00000165802.23	novel	1852	16	NA	NA	-22	0	intron_retention	FALSE	non_canonical	0	0	junction_15	149.328809455287	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCGCGTGGGTCTGTCC	-3	True	NA	-28	True	ATTAAA	-18	NA	137459356	137448224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137455238_137455308_137456410_137456487_137457406_137457902_137458487_137458550_137459031_137459114_137459162
transcript_185108.known	chr9	-	2981	15	FSM	ENSG00000165802.23	ENST00000265663.12	2981	15	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_11	69.4291593155592	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCGGCCGCCGCGTGGG	-15	True	NA	-35	True	ATTAAA	-11	NA	137459334	137448231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137455238_137455308_137456410_137456487_137457406_137457902_137458487_137458550_137459031
transcript_18511.nic	chr1	+	1377	8	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	35413	-28	13968	5prime_fragment	FALSE	canonical	3	205	junction_5	23.07662480184	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTCAAGAGGTAAGGT	NA	False	NA	38	True	AAAAAG	-5	NA	214603166	214629158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045
transcript_185113.known	chr9	-	3571	14	FSM	ENSG00000165802.23	ENST00000371474.7	3571	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	132.640413486768	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTGTAGACTCTGTG	-15	True	NA	-11	True	TATAAA	-17	NA	137459334	137447572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137456410_137456487_137457406_137457902_137458487_137458550_137459031
transcript_185115.known	chr9	-	3649	16	FSM	ENSG00000165802.23	ENST00000371475.9	3649	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	193.060220886875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTAGACTCTGTGTTA	-15	True	NA	-8	True	TATAAA	-20	NA	137459334	137447569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137455238_137455308_137455628_137455635_137456410_137456487_137457406_137457902_137458487_137458550_137459031
transcript_185116.known	chr9	+	582	2	FSM	ENSG00000182154.8	ENST00000371443.6	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	1822	junction_1	0	1213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGTTTGTTTTTTGGC	-26	True	NA	16	True	ATTAAA	-16	NA	137551878	137552555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137551979_137552073
transcript_18512.known	chr1	+	10290	20	FSM	ENSG00000117724.14	ENST00000366955.8	10290	20	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_11	94.0163538552935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCCTAAGTGTAAA	-3	True	NA	27	True	AATAAA	-24	NA	214603194	214664571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920_214643325_214644556_214647401_214648674_214648828_214651709_214651887_214652827_214652990_214655240_214655404_214656932_214657410_214658849_214659029_214663590
transcript_18513.nic	chr1	+	1118	7	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	42436	-28	6945	5prime_fragment	FALSE	canonical	3	205	junction_5	23.7112256583717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGGCCAAGTGAATAAG	NA	False	NA	-50	True	AAAAAG	-4	NA	214603166	214622135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078
transcript_185132.nic	chr9	-	1947	10	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_8	62.9569713924803	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	NA	False	NA	-13	True	ATTAAA	-18	NA	137578936	137554903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137576308_137576403_137577469_137577604_137578624
transcript_18514.nic	chr1	+	1174	7	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	42380	-28	7001	5prime_fragment	FALSE	canonical	3	205	junction_5	23.7112256583717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGAATTAATTGAAAAAGA	NA	False	NA	6	True	NA	NA	NA	214603166	214622191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078
transcript_185156.nic	chr9	-	1839	9	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	81.8259394996477	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	NA	False	NA	-13	True	ATTAAA	-18	NA	137578962	137554903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137576308_137576403_137578624
transcript_185158.known	chr9	-	2302	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_7	46.0970443737991	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGACAACCAGTTACAG	-30	True	NA	NA	False	AATAAA	-19	NA	137578925	137554443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_18517.nic	chr1	+	677	4	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	45877	-28	3504	5prime_fragment	FALSE	canonical	3	207	junction_2	21.2132034355964	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGCATTTTCTTCCTTG	NA	False	NA	11	True	NA	NA	NA	214603166	214618694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572
transcript_185182.nic	chr9	-	1711	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_7	68.0534004008797	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-33	True	NA	-13	True	ATTAAA	-18	NA	137578928	137554903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137578624
transcript_18519.known	chr1	+	689	3	FSM	ENSG00000117724.14	ENST00000464322.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	22.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAACAAACAAACAGTG	-3	True	NA	NA	False	NA	NA	NA	214603194	214615190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214603322_214613713_214613917_214614831
transcript_185195.nic	chr9	-	1787	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	75.4412868070398	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	NA	False	NA	-13	True	ATTAAA	-18	NA	137578936	137554903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_18520.nic	chr1	+	352	2	ISM	ENSG00000117724.14	ENST00000464322.5	689	3	-28	1280	-28	17	5prime_fragment	FALSE	canonical	3	252	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGTACCCCTGAAGCT	NA	False	NA	0	True	NA	NA	NA	214603166	214613910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713
transcript_185242.known	chr9	-	1395	6	FSM	ENSG00000165724.6	ENST00000298585.3	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_5	39.5049364004044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTCTCGGACATTCT	-7	True	NA	-23	True	AGTAAA	-13	NA	137590512	137582080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137582687_137582982_137583164_137586966_137587108_137587716_137587824_137588658_137588719_137590212
transcript_185253.nic	chr9	+	1664	8	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	86.8902662405113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	NA	False	NA	16	True	AATAAA	-17	NA	137605624	137615360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613007_137613412_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_185260.known	chr9	+	1556	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_7	18.087090897733	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	0	True	NA	16	True	AATAAA	-17	NA	137605685	137615360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_185272.nic	chr9	+	1736	7	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-60	0	intron_retention	FALSE	canonical	3	20	junction_2	93.8468018753022	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	NA	False	NA	15	True	AATAAA	-16	NA	137605624	137615359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613007_137613412_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_185276.nic	chr9	+	1689	7	ISM	ENSG00000197070.14	ENST00000371421.9	1556	8	-61	1	-60	0	intron_retention	FALSE	canonical	3	246	junction_2	14.3759057685652	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	NA	False	NA	15	True	AATAAA	-16	NA	137605624	137615359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_18528.known	chr1	+	4019	18	FSM	ENSG00000136636.13	ENST00000259154.9	4019	18	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_14	36.4645156234658	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTTTCAGTTATTTAAG	3	True	NA	29	True	AATAAA	-15	NA	215567303	215621807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016_215608173_215611824_215611922_215618885_215619071_215619152_215619292_215620056
transcript_185280.nic	chr9	+	2070	7	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-60	0	intron_retention	FALSE	canonical	3	231	junction_6	18.3825098032523	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	NA	False	NA	16	True	AATAAA	-17	NA	137605624	137615360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_185289.nic	chr9	+	1951	6	NIC	ENSG00000197070.14	novel	829	7	NA	NA	-60	0	intron_retention	FALSE	canonical	3	246	junction_2	13.6586968631711	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	NA	False	NA	15	True	AATAAA	-16	NA	137605624	137615359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137614215_137614298_137614476_137614558
transcript_185290.nic	chr9	+	2142	6	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-60	0	intron_retention	FALSE	canonical	3	250	junction_3	12.328828005938	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	NA	False	NA	15	True	AATAAA	-16	NA	137605624	137615359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_185303.known	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	112	junction_2	26	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	19	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137616200_137617933_137618192_137618530
transcript_185305.known	chr9	-	1825	2	FSM	ENSG00000203993.7	ENST00000496793.3	1841	2	0	16	0	-16	multi-exon	FALSE	canonical	3	164	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTACAGGAGTTG	9855	False	NA	-16	True	AATAAA	-2	NA	137618906	137615347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137616200_137617933
transcript_185306.known	chr9	-	2210	2	FSM	ENSG00000203993.7	ENST00000623970.1	2210	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGCTCTACAAATAAAGT	1	True	NA	-35	True	NA	NA	NA	137618831	137615366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137616133_137617387
transcript_185308.known	chr9	+	5095	27	FSM	ENSG00000181090.21	ENST00000460843.6	5095	27	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	83.9940474081348	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	-4	True	NA	15	True	AATAAA	-20	NA	137619004	137836127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_185310.nic	chr9	+	4741	27	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-40	0	combination_of_known_junctions	TRUE	canonical	3	274	junction_4	76.9253172750677	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	6459	False	NA	10	True	AATAAA	-18	NA	137618951	137835741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_185311.nic	chr9	+	5114	27	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	274	junction_4	76.9253172750677	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTTTAAATGGGGTT	6459	False	NA	2	True	AATAAA	-7	NA	137618951	137836114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_18532.nic	chr1	+	2218	14	ISM	ENSG00000136636.13	ENST00000259154.9	4019	18	-3	13267	-3	-10411	5prime_fragment	FALSE	canonical	3	433	junction_8	29.0056105570454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGGTCCCTATAAATGAG	0	True	NA	NA	False	AATAAA	-18	NA	215567300	215608540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016
transcript_185320.nic	chr9	+	4684	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_6	107.303725937173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	6459	False	NA	10	True	AATAAA	-18	NA	137618951	137835741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_185356.known	chr9	+	1735	5	FSM	ENSG00000159247.13	ENST00000503395.5	1735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACGCAGATGAGACCTT	NA	False	NA	NA	False	NA	NA	NA	138150112	138176508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_138150309_138174045_138174873_138175362_138175472_138175600_138175902_138176206
transcript_18536.known	chr1	-	3218	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	11.7200682591869	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	-13	True	NA	-7	True	AATAAA	-27	NA	217631082	217608183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_185365.known	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1088	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-4	True	NA	NA	False	NA	NA	NA	647	1601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_600_1600
transcript_185366.known	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-2	True	NA	NA	False	NA	NA	NA	1670	3229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_1700_3200
transcript_185367.known	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	-4	True	NA	NA	False	NA	NA	NA	3306	4262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_3300_4300
transcript_185368.known	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	17	True	NA	NA	False	NA	NA	NA	4469	5511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_4500_5500
transcript_185369.known	chrM	+	1542	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	1	True	NA	NA	False	CATAAA	-8	NA	5903	7445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_5900_7400
transcript_18537.nic	chr1	-	768	2	ISM	ENSG00000092978.11	ENST00000366934.3	3218	6	-19	11734	-11	-11734	5prime_fragment	FALSE	canonical	3	71	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATAATCAGACAAG	-32	True	NA	-91	True	AAAAAG	-4	NA	217631101	217619917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_217620500_217630915
transcript_185370.known	chrM	+	684	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCTCTACCCCCTCTA	-2	True	NA	NA	False	NA	NA	NA	7585	8269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_7600_8300
transcript_185371.known	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	21	False	NA	NA	False	NA	NA	NA	8526	9207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_8500_9200
transcript_185372.known	chrM	+	784	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	1	True	NA	NA	False	NA	NA	NA	9206	9990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_9200_10000
transcript_185373.known	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	2	True	NA	NA	False	AATGAA	-42	NA	8365	8572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_8400_8600
transcript_185374.known	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	-4	True	NA	NA	False	AAAAAG	-19	NA	10058	10404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_10100_10400
transcript_185375.known	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-4	True	NA	NA	False	NA	NA	NA	10759	12137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_10800_12100
transcript_185376.known	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-2	True	NA	NA	False	NA	NA	NA	10469	10766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_10500_10800
transcript_185377.known	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	-2	True	NA	NA	False	NA	NA	NA	12336	14148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_12300_14100
transcript_185378.known	chrM	-	525	1	FSM	ENSG00000198695.2	ENST00000361681.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATTAGGAGTAGGG	-1	True	NA	NA	False	NA	NA	NA	14673	14148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_-_14100_14700
transcript_185379.known	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	712	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	-7	True	NA	NA	False	AAAACA	-19	NA	14746	15887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_14700_15900
transcript_18538.nic	chr1	-	466	2	ISM	ENSG00000092978.11	ENST00000366934.3	3218	6	-19	12036	-11	-12036	5prime_fragment	FALSE	canonical	3	71	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACAGTGACTCTGATGA	-32	True	NA	NA	False	AATAAA	-4	NA	217631101	217620219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_217620500_217630915
transcript_185396.nnic	chrX	+	2314	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	83	junction_7	73.2270720542113	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	4825	False	NA	15	True	AATAAA	-21	NA	281184	303356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_18540.known	chr1	+	7765	5	FSM	ENSG00000067533.6	ENST00000366932.4	7765	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	28.995689334796	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTTCTTGATTTTT	-8	True	NA	20	True	AATAAA	-21	NA	218285292	218337983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_218285456_218302293_218302560_218305027_218305126_218307430_218307633_218330947
transcript_185400.nnic	chrX	+	2144	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_7	101.962778322608	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	4825	False	NA	15	True	AATAAA	-21	NA	281184	303356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299459_302828
transcript_18543.known	chr1	+	492	2	FSM	ENSG00000067533.6	ENST00000491428.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATGTGAAGGTGGAT	41	False	NA	NA	False	NA	NA	NA	218285341	218302671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_218285456_218302293
transcript_185430.known	chrX	+	5318	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	13.5574907543968	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	-13	True	NA	15	True	AATAAA	-21	NA	281380	303356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_185443.known	chrX	+	5287	8	FSM	ENSG00000182378.15	ENST00000399012.6	5287	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	84.6269123016685	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	NA	False	NA	12	True	AATAAA	-18	NA	276321	303353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_276395_281481_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_185447.nnic	chrX	-	2323	11	NNC	ENSG00000178605.13	novel	1907	10	NA	NA	-76	1170	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	105.539566040419	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACTTTAATGATGTT	NA	False	NA	-29	True	AATAAA	-12	NA	318895	303358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_303478_304528_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_18545.known	chr1	+	1857	5	FSM	ENSG00000143353.12	ENST00000366928.10	1857	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	29.8695078633713	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTCTCTGCATCGA	1	True	NA	13	True	AATAAA	-18	NA	219173877	219212858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219173982_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_185463.known	chrX	-	1907	10	FSM	ENSG00000178605.13	ENST00000326153.9	1907	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_7	32.2765824984272	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATTTCCAGTTCCTCC	4	True	NA	-5	True	ATTAAA	-22	NA	318819	304749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_18547.known	chr1	+	1819	5	FSM	ENSG00000143353.12	ENST00000366927.3	1819	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	90.6542194274486	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	-2	True	NA	20	True	AATAAA	-25	NA	219173874	219212865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219173982_219179146_219179247_219193129_219193252_219210531_219210648_219211491
transcript_185479.nic	chrX	-	1751	13	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	298	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_12	99.751740447083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTTGATTGCCGCTGTG	732	False	NA	-8	True	GATAAA	-20	NA	373746	334234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_373531
transcript_185480.known	chrX	-	2378	13	FSM	ENSG00000167393.18	ENST00000390665.9	2378	13	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_12	45.9428237655845	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCACGGGCTCGGC	27	True	NA	NA	False	NA	NA	NA	386907	333932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_386367
transcript_185491.known	chrX	+	484	2	FSM	ENSG00000281849.3	ENST00000627721.3	484	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-2	True	NA	NA	False	NA	NA	NA	386979	405579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_387291_405406
transcript_18550.known	chr1	+	1662	4	FSM	ENSG00000143353.12	ENST00000474379.5	1662	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	124.835892274618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	50	False	NA	20	True	AATAAA	-25	NA	219173926	219212865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219173982_219179146_219179247_219210514_219210648_219211491
transcript_18553.known	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_18	108.138231959092	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	181	False	220046529	-16	True	AATAAA	-14	NA	220046505	219968599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_185549.known	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4519	junction_3	194.732865456473	2147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	-3	True	NA	30	True	AATAAA	-18	NA	1392113	1386151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
transcript_18557.known	chr1	-	2968	21	FSM	ENSG00000136628.18	ENST00000609181.5	2968	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	235.076854454027	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	24	True	NA	NA	False	NA	NA	NA	220046451	219987295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_18558.nic	chr1	-	3049	20	ISM	ENSG00000136628.18	ENST00000366923.8	4862	32	-48	18696	-23	0	5prime_fragment	FALSE	canonical	3	586	junction_6	75.3652233958536	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	133	False	NA	NA	False	NA	NA	NA	220046553	219987295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_185591.known	chrX	-	2065	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	0	0	0	multi-exon	TRUE	canonical	1	190	junction_11	118.025303313409	4673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCCTCCATAGGG	-19	True	NA	-14	True	AATAAA	-16	NA	1452909	1403138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_185607.known	chrX	-	2035	12	FSM	ENSG00000169093.16	ENST00000381333.9	2035	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	175.616882036433	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	-1	True	NA	-16	True	AATAAA	-14	NA	1452929	1403140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1442185_1442318_1452747
transcript_185608.nnic	chrX	-	2044	12	NIC	ENSG00000169093.16	novel	2065	13	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_9	197.935919173791	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	796	False	NA	-16	True	AATAAA	-14	NA	1452955	1403140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1439096_1439145_1442185_1442318_1452747
transcript_18562.nic	chr1	-	2368	18	ISM	ENSG00000136628.18	ENST00000609181.5	2968	21	-107	13846	-28	59	5prime_fragment	FALSE	canonical	0	0	junction_5	249.104513856191	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTAATGACTTTTACGG	128	False	NA	NA	False	NA	NA	NA	220046558	220001141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_18564.nic	chr1	-	1940	16	ISM	ENSG00000136628.18	ENST00000609181.5	2968	21	-59	18963	-5	-5058	5prime_fragment	FALSE	canonical	0	0	junction_3	258.164340424209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTACAAGAAAACCACTAA	176	False	220046529	NA	False	AAAACA	-3	NA	220046510	220006258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_185656.known	chrX	-	851	2	FSM	ENSG00000169093.16	ENST00000474865.6	851	2	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAATCTCTTGTGGCCG	18	True	NA	NA	False	NA	NA	NA	1452872	1441591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1442318_1452747
transcript_185658.known	chrX	+	3232	6	FSM	ENSG00000197976.12	ENST00000474361.6	3232	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	202.530590282061	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATGAACTAAAATT	5	True	NA	3	True	AATAAA	-5	NA	1591622	1602502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600137_1600208_1600658
transcript_185666.known	chrX	+	3199	5	FSM	ENSG00000197976.12	ENST00000313871.9	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	61.648195431821	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCACGCTTACGATTTT	-14	True	NA	21	True	AATAAA	-23	NA	1591603	1602520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600658
transcript_185670.known	chrX	+	2187	4	FSM	ENSG00000197976.12	ENST00000381261.8	2187	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	32.4995726467629	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCCGCTTGTGACCTAA	7	True	NA	NA	False	NA	NA	NA	1591624	1600303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191
transcript_185673.known	chrX	+	1330	9	FSM	ENSG00000196433.13	ENST00000381241.9	1330	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.47213595499958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	-2	True	NA	2	True	AATAAA	-15	NA	1615058	1643081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1632703_1632788_1633149_1633291_1636437_1636561_1642802
transcript_185674.known	chrX	+	1087	8	FSM	ENSG00000196433.13	ENST00000381229.9	1087	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.49943307086389	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAACTAACGTCAAAGC	0	True	NA	-52	True	NA	NA	NA	1615163	1643027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1633149_1633291_1636437_1636561_1642802
transcript_185675.known	chrX	+	989	7	FSM	ENSG00000196433.13	ENST00000381233.8	989	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.82970843102535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	11	False	NA	2	True	AATAAA	-15	NA	1615174	1643081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1636437_1636561_1642802
transcript_185678.nic	chrX	-	1669	8	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-43	-1254	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	114.307497923945	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	2143	False	NA	46	True	CATAAA	-23	NA	2500693	2220759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2392353_2392475_2408744_2408814_2425196_2425305_2500310
transcript_18568.nic	chr1	-	929	7	ISM	ENSG00000136628.18	ENST00000609181.5	2968	21	-132	37852	-53	-23947	5prime_fragment	FALSE	canonical	3	653	junction_2	79.8094953971992	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATTTTGAGAAGGTAA	103	False	NA	15	True	AAAAAG	-5	NA	220046583	220025147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_185681.nnic	chrX	-	1600	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-43	-1254	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	122.918333322034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	2143	False	NA	46	True	CATAAA	-23	NA	2500693	2220759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2392353_2392475_2425196_2425305_2500310
transcript_185684.nic	chrX	-	1548	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-43	-1254	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	79.1973624701115	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	2143	False	NA	46	True	CATAAA	-23	NA	2500693	2220759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
transcript_185685.known	chrX	-	2579	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	75.9334503949932	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	-31	True	NA	NA	False	AATAAA	-30	NA	2500976	2219505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
transcript_185690.nic	chrX	-	1460	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-43	-1342	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	79.1973624701115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAGTGGTCTTCAACCA	2143	False	NA	-42	True	AATAAA	-19	NA	2500693	2220847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
transcript_185699.nic	chrX	-	1479	6	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-43	-1254	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	107.80241184686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	2143	False	NA	46	True	CATAAA	-23	NA	2500693	2220759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2425196_2425305_2500310
transcript_18570.known	chr1	-	2400	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.79038842777054	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	14	True	NA	48	True	ATTAAA	-21	NA	220089788	220057481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_185700.nic	chrX	-	1296	6	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-40	-1254	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	105.247517785457	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	1820	False	NA	46	True	CATAAA	-23	NA	2501016	2220759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2425196_2425305_2500816
transcript_185709.nic	chrX	-	1208	6	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-40	-1342	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	105.247517785457	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAGTGGTCTTCAACCA	1820	False	NA	-42	True	AATAAA	-19	NA	2501016	2220847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2425196_2425305_2500816
transcript_185718.nic	chrX	-	1199	3	ISM	ENSG00000169084.15	ENST00000478825.7	679	5	-104	116604	-43	-70275	5prime_fragment	FALSE	canonical	3	114	junction_2	42	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAATCAAACAGGAATAT	2143	False	NA	NA	False	AAAAAG	-16	NA	2500693	2408105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_2408814_2425196_2425305_2500310
transcript_185719.nic	chrX	-	1016	3	ISM	ENSG00000169084.15	ENST00000430536.7	490	4	-56	70275	-40	-70275	5prime_fragment	FALSE	canonical	3	128	junction_2	35	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAATCAAACAGGAATAT	1820	False	NA	NA	False	AAAAAG	-16	NA	2501016	2408105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_2408814_2425196_2425305_2500816
transcript_185722.known	chrX	-	4507	2	FSM	ENSG00000214717.12	ENST00000381222.8	4507	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCGTGTCCGTCTGGAC	-22	True	NA	-7	True	AATAAA	-35	NA	2500967	2486413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2490770_2500816
transcript_185723.known	chrX	-	2832	2	FSM	ENSG00000214717.12	ENST00000381218.8	2832	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAAGAGAGGTGGCTTT	2281	False	NA	NA	False	AAAAAG	-10	NA	2500555	2488185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2490773_2500310
transcript_185724.known	chrX	-	947	2	FSM	ENSG00000214717.12	ENST00000461691.6	947	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGACATCGTGAAGGCGT	1941	False	NA	NA	False	NA	NA	NA	2500895	2489904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2490773_2500816
transcript_185738.known	chrX	+	984	10	FSM	ENSG00000223773.8	ENST00000430562.7	1030	10	46	0	2	0	multi-exon	FALSE	canonical	3	67	junction_7	13.2925301588784	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	22	True	NA	15	True	AATAAA	-16	NA	2609393	2638329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2622689_2622735_2623384_2623454_2626596_2626643_2637973
transcript_18574.known	chr1	+	3530	23	FSM	ENSG00000067704.10	ENST00000366922.3	3530	23	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_19	42.574412250933	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGATTTTGGTGCAGA	4	True	NA	22	True	AATAAA	-18	NA	220094131	220148041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220094484_220096103_220096227_220100489_220100650_220102128_220102278_220102362_220102413_220102494_220102605_220102686_220102778_220103446_220103563_220105890_220106061_220107060_220107152_220110785_220110938_220114313_220114475_220125236_220125340_220126749_220126844_220134401_220134511_220136808_220136912_220137917_220138044_220139007_220139140_220140182_220140290_220141802_220141949_220142943_220143135_220145508_220145654_220147492
transcript_185743.nic	chrX	+	1114	9	FSM	ENSG00000223773.8_ENSG00000277120.5	ENST00000685470.1	952	9	-162	0	28	0	multi-exon	FALSE	canonical	3	24	junction_6	24.7862739232826	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	NA	False	NA	15	True	AATAAA	-16	NA	2609218	2638329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2623384_2623454_2626596_2626643_2637973
transcript_185749.known	chrX	+	573	11	FSM	ENSG00000002586.20	ENST00000623253.4	573	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	605.074673077629	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTGTCGGCAGAAACAG	32	False	NA	NA	False	NA	NA	NA	2691360	2740804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2733356_2733375_2738202_2738257_2740778
transcript_185752.known	chrX	+	1089	10	FSM	ENSG00000002586.20	ENST00000624481.4	1089	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_8	400.412287523747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	18	False	NA	-7	True	NA	NA	NA	2691312	2741290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738202_2738257_2740778
transcript_185757.known	chrX	+	892	9	FSM	ENSG00000002586.20	ENST00000381187.8	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	472.176079444946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCACCGAGGCACCC	0	True	NA	NA	False	NA	NA	NA	2691275	2741101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2691428_2714421_2714455_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
transcript_185760.known	chrX	+	3393	12	FSM	ENSG00000056998.20	ENST00000381163.7	3393	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	124.798813302262	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	8	False	NA	28	True	ATTAAA	-14	NA	2828821	2882818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2828976_2830060_2830196_2842997_2843091_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_185768.known	chrX	+	3192	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_9	58.182901268328	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	-5	True	NA	28	True	ATTAAA	-14	NA	2828929	2882818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_185774.nnic	chrX	+	3271	11	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	101.816698041137	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	27	False	NA	28	True	ATTAAA	-14	NA	2828961	2882818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_2829087_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_185776.nnic	chrX	+	3220	11	NNC	ENSG00000056998.20	novel	1293	9	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	103.338085912213	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	195	False	NA	28	True	ATTAAA	-14	NA	2829194	2882818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_2829269_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_185781.nic	chrX	+	3194	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	91.9864455930302	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	-4	True	NA	28	True	ATTAAA	-14	NA	2828785	2882818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_185790.nic	chrX	+	2593	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-36	-529	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	102.022975353594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGAAGGTTTATTTCT	-4	True	NA	19	True	AATAAA	-24	NA	2828785	2882288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_185791.nic	chrX	+	3122	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	102.022975353594	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	-4	True	NA	27	True	ATTAAA	-13	NA	2828785	2882817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_185799.known	chrX	+	2852	8	FSM	ENSG00000056998.20	ENST00000381161.5	2852	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	127.804218894945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	2	True	NA	27	True	ATTAAA	-13	NA	2828913	2882817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_185804.known	chrX	-	5145	10	FSM	ENSG00000006756.16	ENST00000381154.6	5145	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.78430808131698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCATTTGTTTGTT	0	True	NA	-1	True	AATAAA	-19	NA	2929339	2903971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2907633_2908720_2908843_2909816_2909980_2910658_2910794_2915555_2915693_2917803_2918228_2920600_2920724_2921902_2922025_2925615_2925766_2929231
transcript_185807.known	chrX	-	2160	7	FSM	ENSG00000006756.16	ENST00000217890.10	2160	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.04700130990891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACCAACGAGGCTGCAGA	97	False	NA	NA	False	AAGAAA	-9	NA	2929275	2913613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2914774_2915555_2915693_2917803_2918228_2920600_2920724_2921902_2922025_2925615_2925766_2929231
transcript_185810.known	chrX	-	2158	12	FSM	ENSG00000157399.17	ENST00000545496.6	2158	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	18.5904089730464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGATTCCTAAATTTT	1	True	NA	-12	True	AATAAA	-21	NA	2964284	2934810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2959602_2959889_2960377_2960421_2964223
transcript_185812.known	chrX	-	2219	11	FSM	ENSG00000157399.17	ENST00000381134.9	2219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.6063765137773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAACAGAGCAAGACC	1	True	NA	NA	False	NA	NA	NA	2964341	2934520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_185818.nic	chrX	-	1974	11	NIC	ENSG00000157399.17	novel	2976	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	19.1104683354438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGATTCCTAAATTTT	4	True	NA	-12	True	AATAAA	-21	NA	2964338	2934810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_185819.known	chrX	-	1407	7	FSM	ENSG00000157399.17	ENST00000681960.1	1407	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.0986376826241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	4000	False	NA	NA	False	AATAAA	-35	NA	2964243	2951909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2959602_2959889_2960377_2960421_2964223
transcript_185821.known	chrX	-	1338	6	FSM	ENSG00000157399.17	ENST00000682745.1	1338	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.3666428910958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGACCTCCCAGACTCAA	-3	True	NA	NA	False	NA	NA	NA	2964288	2951737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_185827.known	chrX	-	9804	7	FSM	ENSG00000101825.8	ENST00000217939.7	9804	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	5.29150262212918	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGCAGTGATGACAATGC	-2	True	NA	-5	True	AATAAA	-19	NA	3346652	3308564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3311625_3317102_3318004_3320007_3324976_3330017_3330409_3330643_3330774_3343645_3343862_3346514
transcript_185829.known	chrX	-	6102	9	FSM	ENSG00000183943.6	ENST00000262848.6	6102	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	11.4503002144049	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGTGGCTTTTCTCCT	-24	True	NA	26	True	NA	NA	NA	3713649	3604339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
transcript_185831.nic	chrX	-	2964	9	NIC	ENSG00000183943.6	novel	669	7	NA	NA	-6	1078	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	44.1014455545394	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTCTCTGAGGAAGCA	-30	True	NA	-11	True	AATAAA	-19	NA	3713655	3609872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3611335_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
transcript_185832.nnic	chrX	-	2449	8	NIC	ENSG00000183943.6	novel	6102	9	NA	NA	-6	746	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	55.2548825065833	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAATGGCTTTGTGCT	-30	True	NA	NA	False	NA	NA	NA	3713655	3607878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3655148_3655413_3674597_3674767_3713087
transcript_185837.nic	chrX	-	1667	3	ISM	ENSG00000183943.6	ENST00000262848.6	6102	9	19	50118	19	-42148	5prime_fragment	FALSE	canonical	3	173	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATTGAATATTCCATAC	-5	True	NA	NA	False	AAAACA	-25	NA	3713630	3654457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_3655413_3674597_3674767_3713087
transcript_18584.nic	chr1	+	435	2	ISM	ENSG00000067704.10	ENST00000366922.3	3530	23	-38	51893	-38	-38698	5prime_fragment	FALSE	canonical	3	529	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGACAGAATTTTGCCT	-34	True	NA	NA	False	AAGAAA	-2	NA	220094093	220096148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_220094484_220096103
transcript_18585.known	chr1	-	7256	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	36.7521390286796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTCCTAAACATTCA	-7	True	NA	-41	True	AATAAA	-14	NA	220272453	220148292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_185878.known	chrX	-	1470	5	FSM	ENSG00000285756.2	ENST00000662024.1	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	23.8890665368072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	343	False	NA	-4	True	ATTAAA	-25	NA	3843566	3817527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3817779_3818441_3818501_3818656_3818704_3828505_3829393_3843340
transcript_185889.nnic	chrX	-	2371	5	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	-14	17	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	39.8779387631808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCATAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3882331	3854331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3860789_3860997_3863501_3863646_3866949_3867807_3881764
transcript_185900.nnic	chrX	-	3747	5	NNC	ENSG00000285756.2	novel	2427	4	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	39.3152324169653	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAAGTAGCCTCCACT	NA	False	NA	NA	False	ATTAAA	-10	NA	3920790	3891437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_3893352_3899215_3899423_3901927_3902072_3905347_3906233_3920193
transcript_185911.nic	chrX	-	1802	4	NIC	ENSG00000285756.2	novel	1470	5	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	20.7257220756131	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATAAGGGCTGTGTGCTG	NA	False	NA	-11	True	ATTAAA	-18	NA	3843952	3817534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3817779_3818441_3818501_3828505_3829393_3843340
transcript_185913.nnic	chrX	-	2039	4	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	-67	13	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	54.9929288383718	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATGCTCACAGA	NA	False	NA	NA	False	AATACA	-23	NA	3882384	3848192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3848491_3854691_3854928_3866921_3867807_3881764
transcript_185914.nnic	chrX	-	2011	4	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	-67	13	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	53.19983291536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATGCTCACAGA	NA	False	NA	NA	False	AATACA	-23	NA	3882384	3848192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3848491_3854691_3854928_3866949_3867807_3881764
transcript_185937.nic	chrX	-	2073	3	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	-67	17	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	52	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCATAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3882384	3854331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3866949_3867807_3881764
transcript_185938.nic	chrX	-	2084	3	NIC	ENSG00000285756.2	novel	793	2	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	56.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAAAAATAG	NA	False	NA	NA	False	TATAAA	-5	NA	3882384	3854348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3866921_3867807_3881764
transcript_18594.known	chr1	-	1906	2	FSM	ENSG00000118873.17	ENST00000462353.1	1906	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAGTCTGGTCTTAC	7	True	NA	-18	True	AGTAAA	-15	NA	220272361	220265984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_220267752_220272222
transcript_185945.nnic	chrX	-	2078	3	NNC	ENSG00000285756.2	novel	1099	2	NA	NA	-44	536	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	57.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCACAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3920790	3892755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_3893352_3905347_3906233_3920193
transcript_185946.nnic	chrX	-	2050	3	NNC	ENSG00000285756.2	novel	1099	2	NA	NA	-44	536	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	49	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCACAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3920790	3892755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_3893352_3905375_3906233_3920193
transcript_185949.known	chrX	-	1099	2	FSM	ENSG00000285756.2	ENST00000381106.4	1099	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCAGAACTCAGTGTG	NA	False	NA	NA	False	CATAAA	-42	NA	3920746	3905686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3906233_3920193
transcript_185953.known	chrX	-	2155	3	FSM	ENSG00000285756.2	ENST00000438107.1	2155	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	54.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCAATTTTGATGC	NA	False	NA	NA	False	AATAGA	-15	NA	3882317	3864397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3865143_3866949_3867807_3881764
transcript_185954.known	chrX	-	5858	6	FSM	ENSG00000146938.16	ENST00000381095.8	5858	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	19.8836616346185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGTGCAAATAATTAT	-8	True	NA	94	True	AATAAA	-20	NA	6228867	5890041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
transcript_185955.known	chrX	-	5865	6	FSM	ENSG00000146938.16	ENST00000381093.6	5865	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	52.3511222420303	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTATGCGTCCATTC	-2	True	NA	NA	False	AATAAA	-30	NA	6227203	5890031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6226879
transcript_185965.known	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	10.6144555520604	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	-11	True	NA	-4	True	AATAAA	-18	NA	7148153	7048919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
transcript_185967.known	chrX	+	6622	11	FSM	ENSG00000101846.9	ENST00000674429.1	6622	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.28952211790544	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACTTTGTTGAGTAT	15	True	NA	NA	False	AATAAA	-19	NA	7147711	7354641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_7148084_7190879_7191009_7253195_7253337_7257241_7257364_7257465_7257589_7259348_7259773_7275950_7276088_7305045_7305184_7325338_7325499_7333985_7334108_7349887
transcript_185969.known	chrX	-	3342	7	FSM	ENSG00000006757.12	ENST00000381042.9	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	15.0268278607148	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	-6	True	NA	NA	False	ATTAAA	-17	NA	7927413	7898246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
transcript_18597.known	chr1	+	5321	18	FSM	ENSG00000116141.17	ENST00000611084.4	5321	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	25.2333058314481	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGGGGCACAGCATT	9	True	NA	3	True	ATTAAA	-14	NA	220528182	220664456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653097_220653353_220657789_220657835_220661811
transcript_185970.nic	chrX	-	870	7	NIC	ENSG00000006757.12	novel	2752	7	NA	NA	0	1389	combination_of_known_junctions	FALSE	canonical	3	53	junction_6	47.0652620187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTTAGATAGTTTTTG	NA	False	NA	-1	True	AATAAA	-26	NA	7927739	7900659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927670
transcript_185971.known	chrX	-	2752	7	FSM	ENSG00000006757.12	ENST00000444736.5	2752	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	60.1758995685888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927685
transcript_185974.known	chrX	-	6265	14	FSM	ENSG00000011201.12	ENST00000262648.8	6265	14	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	36.9020773617078	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAGTCGACTCATTTA	13	True	NA	-2	True	AATAAA	-17	NA	8732137	8528873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_8533054_8534318_8534461_8535590_8535812_8536770_8536943_8539663_8539759_8553951_8554099_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
transcript_185979.nic	chrX	-	1796	9	NIC	ENSG00000011201.12	novel	704	3	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	85.2040748732125	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGATTTTCGCCCATA	NA	False	NA	0	True	AATAAA	-15	NA	8732218	8565805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_8566213_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
transcript_18598.known	chr1	+	5273	17	FSM	ENSG00000116141.17	ENST00000402574.5	5273	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	23.5138755578488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGGGGCACAGCATT	9	True	NA	3	True	ATTAAA	-14	NA	220528182	220664456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220661811
transcript_185984.known	chrX	-	1645	9	FSM	ENSG00000101850.13	ENST00000467482.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	25.5085769889267	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTTAATGATGGGG	1	True	NA	49	True	AATAAA	-15	NA	9765847	9725345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9765567
transcript_185986.nic	chrX	-	1380	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-29	-70	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	42.4394789671127	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTCAGCCTGACTTG	NA	False	NA	-21	True	AATAAA	-12	NA	9786326	9725415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
transcript_185988.nnic	chrX	-	1623	8	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-141	-70	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	51.4249998759835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTCAGCCTGACTTG	33	False	NA	-21	True	AATAAA	-12	NA	9765988	9725415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9759331_9759427_9760716_9760827_9765567
transcript_185991.known	chrX	+	7474	10	FSM	ENSG00000146950.13	ENST00000380913.8	7474	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	7.43863786814047	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTCTTTGATTTAC	-5	True	NA	20	True	AATAAA	-20	NA	9786428	9949443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_9786711_9873651_9873804_9890976_9891109_9894357_9896699_9898189_9898291_9932174_9932871_9937133_9937686_9939194_9939367_9944640_9944914_9946670
transcript_185994.known	chrX	+	6759	13	FSM	ENSG00000073464.13	ENST00000380833.9	6759	13	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	8.0221048775659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAGATACTGATTTCA	8	True	NA	15	True	AATAAA	-32	NA	10156974	10237660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_10157101_10158288_10158552_10185021_10185177_10187514_10187615_10194910_10195099_10197938_10198062_10206357_10206565_10206695_10206777_10208044_10208591_10212466_10212654_10213680_10214080_10220660_10220878_10233493
transcript_185999.known	chrX	+	3581	13	FSM	ENSG00000073464.13	ENST00000421085.7	3581	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.9074388479708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATTTGGGCACTGGGC	-10	True	NA	-1	True	ATTAAA	-9	NA	10158477	10234773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_10158552_10185021_10185177_10187514_10187615_10194910_10195099_10195702_10195727_10197938_10198062_10206357_10206565_10206695_10206777_10208044_10208591_10212466_10212654_10213680_10214080_10220660_10220878_10233493
transcript_18600.known	chr1	+	1220	3	FSM	ENSG00000116141.17	ENST00000485104.2	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGAATTGACCTCTGA	47	True	NA	NA	False	NA	NA	NA	220528220	220581427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064
transcript_186000.nic	chrX	-	3769	11	NIC	ENSG00000101871.17	novel	6168	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	50.2887661411572	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCGTTATTCAGGA	-11	True	NA	NA	False	AATAGA	-30	NA	10620585	10448107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10501406_10501560_10523091_10523188_10566887_10567604_10620289
transcript_186003.known	chrX	-	6168	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	17.3205080756888	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	-11	True	NA	-6	True	AATAAA	-22	NA	10620585	10445555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_186004.nic	chrX	-	3485	10	FSM	ENSG00000101871.17	ENST00000690004.1	3473	10	17	-29	17	-2	multi-exon	FALSE	canonical	3	13	junction_8	38.6522961801754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCGTTATTCAGGA	6	True	NA	NA	False	AATAGA	-30	NA	10620568	10448107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10567001_10567604_10620289
transcript_186009.nic	chrX	-	2124	7	ISM	ENSG00000101871.17	ENST00000380782.6	3352	10	-221	21159	-49	-1	5prime_fragment	FALSE	canonical	3	94	junction_5	14.8856754409511	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAATACAAAAAAAATA	NA	False	NA	NA	False	TATAAA	-32	NA	10620640	10469264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_186015.nic	chrX	-	2147	2	FSM	ENSG00000101871.17	ENST00000693721.1	1992	2	-49	-106	-49	106	multi-exon	FALSE	canonical	3	141	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCTCTAAGTATGGATA	NA	False	NA	NA	False	NA	NA	NA	10620640	10565807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_10567604_10620289
transcript_186017.known	chrX	+	2277	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	122.987465485986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	-11	True	NA	12	True	AATAAA	-19	NA	11111300	11123078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_186019.known	chrX	+	2312	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.2156057578013	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGAATAATTTTACA	20	True	NA	20	True	AATAAA	-27	NA	11111331	11123086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_18602.known	chr1	+	2891	2	FSM	ENSG00000162817.7	ENST00000294889.6	2891	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGGTGTGAAGGGTT	-20	True	NA	14	True	AATAAA	-18	NA	220690362	220699153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220690712_220696611
transcript_186021.known	chrX	+	1000	7	FSM	ENSG00000004961.15	ENST00000380763.7	1000	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	138.057657037437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTGCACTCATGATGT	30	True	NA	29	True	ATTAAA	-15	NA	11111341	11121879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11111424_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_186025.known	chrX	+	2286	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	11.7434970184448	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGTCCTCTTTA	9	True	NA	27	True	AATAAA	-40	NA	11758236	11775772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_186026.known	chrX	+	2329	13	FSM	ENSG00000005302.19	ENST00000398527.7	2329	13	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	19.006395122578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCCTGTCTTGTTT	240	False	NA	-19	True	NA	NA	NA	11758555	11775726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758774_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_186027.known	chrX	+	2230	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	15.7347810068438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	907	False	NA	-9	True	AATAAA	-4	NA	11759603	11775736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_186028.known	chrX	+	2296	12	FSM	ENSG00000005302.19	ENST00000649785.1	2296	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	20.5924643201551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAGAGAGTTTTCAC	936	False	NA	8	True	AATAAA	-21	NA	11759632	11775753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768574_11768683_11772155_11772256_11772620_11772706_11774979
transcript_18603.known	chr1	+	2146	8	FSM	ENSG00000117791.16	ENST00000366913.8	2146	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	6.19743198956682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTATTTATGAGTCT	6	True	NA	14	True	AATAAA	-23	NA	220748321	220784815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220748804_220754946_220755121_220761657_220761821_220762909_220763051_220780017_220780080_220780167_220780240_220781777_220781933_220783918
transcript_186030.known	chrX	+	3480	9	FSM	ENSG00000005302.19	ENST00000337339.7	3480	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.3082446250435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTACTTTTTATTT	-25	True	NA	3	True	AATAAA	-19	NA	11758202	11767977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
transcript_186031.known	chrX	+	1715	10	FSM	ENSG00000005302.19	ENST00000647857.1	1715	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	12.8706767882522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTAGCATTTAATTTT	22	True	NA	5	True	AATAAA	-23	NA	11758249	11769102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572
transcript_186032.known	chrX	+	2469	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	9.53356643071673	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	17	True	NA	9	True	AATAAA	-20	NA	12791411	12824222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
transcript_186034.known	chrX	+	763	4	FSM	ENSG00000101911.13	ENST00000489404.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	11.6714276000077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATATATTGGTTTATTTG	93	False	NA	NA	False	AATACA	-20	NA	12791487	12810369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021
transcript_186035.known	chrX	+	767	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	17707.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTGTTTGGTT	20	False	NA	31	True	AATAAA	-16	NA	12975243	12977227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12975444_12976245_12976362_12976776
transcript_186037.known	chrX	+	1702	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	0	0	0	0	multi-exon	FALSE	canonical	3	36504	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	8	True	NA	30	True	AATAAA	-15	NA	12975109	12977226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12976362_12976776
transcript_186038.known	chrX	+	622	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	36504	junction_2	237.5	18279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	8	True	NA	27	True	AATAAA	-12	NA	12975109	12977223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12975169_12976245_12976362_12976776
transcript_186039.known	chrX	+	2385	12	FSM	ENSG00000198759.12	ENST00000380602.3	2385	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.4473609501561	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCATGGTTTAATT	9	True	NA	4	True	TTTAAA	-31	NA	13569621	13633575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13569936_13589555_13589669_13594835_13594929_13599974_13600095_13603316_13603437_13606378_13606514_13608323_13608447_13617729_13618054_13619162_13619244_13623820_13623926_13627010_13627277_13632984
transcript_186040.known	chrX	+	2403	12	FSM	ENSG00000198759.12	ENST00000361306.6	2403	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.25500250726694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCATGGTTTAATT	-12	True	NA	4	True	TTTAAA	-31	NA	13569600	13633575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13569936_13589555_13589669_13594835_13594929_13599974_13600095_13603316_13603437_13606378_13606514_13608323_13608447_13617729_13618054_13619162_13619244_13623823_13623926_13627010_13627277_13632984
transcript_186045.known	chrX	+	2034	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	9.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGTGGTTGGTGAC	-14	True	NA	NA	False	GATAAA	-32	NA	13689127	13710504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13689289_13703813_13703903_13708720
transcript_186047.known	chrX	+	393	3	FSM	ENSG00000123595.8	ENST00000243325.6	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	74.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGATATGTAACTAATA	19	True	NA	NA	False	TTTAAA	-45	NA	13689160	13708817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13689289_13703734_13703903_13708720
transcript_186049.known	chrX	+	737	2	FSM	ENSG00000123595.8	ENST00000618931.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGATTGTTGATGCATTC	7	False	NA	NA	False	NA	NA	NA	13689185	13709354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13689289_13708720
transcript_18605.nnic	chr1	+	887	2	NIC	ENSG00000117791.16	novel	1335	5	NA	NA	21	7	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGCAAAAATGTTTTTAAA	-9	True	NA	15	True	AATAAA	-26	NA	220748245	220784247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_220748804_220783918
transcript_186051.known	chrX	-	2836	6	FSM	ENSG00000196459.15	ENST00000683983.1	2836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.6287695351964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	-7	True	NA	-16	True	AATAAA	-14	NA	13734620	13712244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734049_13734186_13734524
transcript_186052.known	chrX	-	2716	5	FSM	ENSG00000196459.15	ENST00000359680.9	2716	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.073476482417	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGGTAGTTTAATATCC	-22	True	NA	-15	True	AATAAA	-15	NA	13734635	13712243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734524
transcript_186054.known	chrX	-	1673	8	FSM	ENSG00000046653.15	ENST00000355135.6	1673	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	373.548893065157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	-3	True	NA	NA	False	AAAAAG	-44	NA	13817069	13773953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13807649_13807770_13816843
transcript_186057.nic	chrX	-	3091	7	NIC	ENSG00000046653.15	novel	3118	8	NA	NA	-211	0	combination_of_known_junctions	FALSE	canonical	3	477	junction_1	152.062943838691	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTTTTTACCATACAT	NA	False	NA	-5	True	AATAAA	-17	NA	13938849	13770938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_186060.nic	chrX	-	3033	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-243	-90	combination_of_known_junctions	FALSE	canonical	3	477	junction_1	152.062943838691	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTATGCTTATTTT	NA	False	NA	-1	True	AATAAA	-21	NA	13938881	13771028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_186062.nic	chrX	-	2606	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-243	0	combination_of_known_junctions	FALSE	canonical	3	477	junction_1	152.062943838691	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	NA	False	NA	-6	True	ATTAAA	-19	NA	13938881	13771455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_186063.known	chrX	-	1033	7	FSM	ENSG00000046653.15	ENST00000398361.7	1033	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	323.850102499426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATTCAGTTATTTAC	-18	True	NA	NA	False	NA	NA	NA	13938415	13774336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938326
transcript_186064.known	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	156.191566851593	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	15	True	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_186066.known	chrX	-	1830	7	FSM	ENSG00000046653.15	ENST00000356942.9	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	324.835043607606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	12	False	NA	NA	False	AAAAAG	-44	NA	13817346	13773953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13816843
transcript_18608.known	chr1	+	1516	9	FSM	ENSG00000286231.1	ENST00000651706.1	1516	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.9223827504406	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGGAGCAGCGGCGG	90	False	NA	NA	False	NA	NA	NA	220786989	220884503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220787220_220791490_220791665_220796642_220796806_220797873_220798015_220805051_220805114_220805202_220805275_220881193_220881374_220882163_220882349_220884194
transcript_186085.nic	chrX	+	1094	8	ISM	ENSG00000046651.16	ENST00000340096.11	3612	23	-60	22522	-55	-7118	5prime_fragment	FALSE	canonical	3	90	junction_1	8.66849797501604	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	-1	True	NA	NA	False	ATTAAA	-18	NA	13734687	13746835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_18609.known	chr1	+	7287	7	FSM	ENSG00000186205.13	ENST00000366910.10	7287	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	13.5851225815432	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCCCAGCCAACATT	13	True	NA	8	True	AATAAA	-19	NA	220786912	220819659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220787220_220791490_220791665_220796642_220796806_220797873_220798015_220805051_220805114_220805202_220805275_220813291
transcript_186092.known	chrX	-	3147	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	25.6843824142221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTGTCTTTAAAAATCA	8	True	NA	-21	True	AATAAA	-15	NA	14029892	14006725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
transcript_186094.known	chrX	-	1682	5	FSM	ENSG00000046647.14	ENST00000380523.8	1682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.6990275052586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGGGCGCAATGGTTC	8	True	NA	NA	False	AATAAA	-20	NA	14029892	14008278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026051_14026222_14029776
transcript_186097.known	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	39.3474550920669	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	7	True	NA	-14	True	CATAAA	-17	NA	14029893	14008672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
transcript_186099.known	chrX	-	3017	10	FSM	ENSG00000181544.15	ENST00000650831.1	3017	10	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_4	21.2939451198089	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGCCATTTTATCTCCC	-16	True	NA	NA	False	AATAAA	-17	NA	14873069	14843404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
transcript_186101.known	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	8.83984485965999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	-15	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
transcript_186105.known	chrX	+	1870	15	FSM	ENSG00000130150.12	ENST00000482354.5	1870	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	20.7909909846176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTACTTGTCTTGATT	19	True	NA	NA	False	TATAAA	-17	NA	14873454	14921756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14921379
transcript_186106.known	chrX	-	3590	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.8921990433521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	11	True	NA	-7	True	AATAAA	-23	NA	15335523	15319455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
transcript_186107.known	chrX	-	3246	6	FSM	ENSG00000165195.16	ENST00000635598.1	3246	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	15.0013332740793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGAGTTTGTCTTAT	-20	True	NA	-8	True	AATAAA	-22	NA	15335554	15319456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331589_15331993_15335500
transcript_186108.known	chrX	-	854	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	14.1619207736804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTATTCTCACAGTAAA	-20	True	NA	NA	False	AATAGA	-30	NA	15335554	15321564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
transcript_186111.known	chrX	-	1539	10	FSM	ENSG00000087842.11	ENST00000380421.3	1539	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	25.8977095130958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493564	15384798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493155
transcript_186112.known	chrX	-	1274	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_7	8.62525719781127	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	-6	True	NA	0	True	AATAAA	-24	NA	15493333	15384798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_186116.known	chrX	-	1352	6	FSM	ENSG00000147003.7	ENST00000380342.4	1352	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	6.01331855134916	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	1	True	NA	-8	True	AATAAA	-27	NA	15664805	15627317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717
transcript_186120.known	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.6316371938716	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	88	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
transcript_186123.known	chrX	+	1479	11	FSM	ENSG00000169249.14	ENST00000307771.8	1479	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	18.762729012593	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	10	True	NA	12	True	AATAAA	-18	NA	15790483	15823260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
transcript_186132.known	chrX	-	1946	6	FSM	ENSG00000182287.15	ENST00000479184.2	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	720.260897175461	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTAATGCTACATAAAT	452	False	NA	NA	False	AATATA	-11	NA	15854789	15830231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15831569_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_186135.known	chrX	-	2365	6	FSM	ENSG00000182287.15	ENST00000673591.1	2365	6	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	721.122070110186	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAAAATATGACCTAGAA	-3	True	NA	NA	False	NA	NA	NA	15854827	15831289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15833008_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_186136.known	chrX	-	2237	5	FSM	ENSG00000182287.15	ENST00000329235.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	593.850307316583	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGACTTTTCTACTC	310	False	NA	-8	True	AATAAA	-21	NA	15854931	15825805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15827373_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_18614.known	chr1	+	2237	4	FSM	ENSG00000136630.13	ENST00000366903.8	2237	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCTTGGCTTTGCTGGG	-3	True	NA	21	True	AATAAA	-22	NA	220879442	220885059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220880450_220881193_220881374_220882163_220882349_220884194
transcript_186141.known	chrX	-	3492	5	FSM	ENSG00000182287.15	ENST00000380291.5	3492	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	671.844662105758	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	20	True	NA	-14	True	AATAAA	-14	NA	15854804	15830058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_186142.known	chrX	-	1925	5	FSM	ENSG00000182287.15	ENST00000450644.2	1925	5	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	632.169429425372	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	-6	True	NA	-93	True	NA	NA	NA	15854755	15830137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15831569_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_186144.nic	chrX	-	966	5	ISM	ENSG00000182287.15	ENST00000673591.1	2365	6	-10	1845	-10	-1845	5prime_fragment	FALSE	canonical	3	574	junction_1	561.137460877457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGATAAACTATAATATAA	-13	True	NA	NA	False	AAGAAA	-3	NA	15854837	15833134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_186145.nic	chrX	-	2137	2	ISM	ENSG00000182287.15	ENST00000673591.1	2365	6	9	19229	0	-19229	5prime_fragment	FALSE	canonical	3	1735	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCGTGGTGGCAT	6	True	NA	NA	False	ATTAAA	-15	NA	15854818	15850518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_15852525_15854687
transcript_186146.known	chrX	-	2128	6	FSM	ENSG00000182287.15	ENST00000672987.1	2128	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	907.897659430841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGACTTTTCTACTC	11	True	NA	-8	True	AATAAA	-21	NA	15854813	15825805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15827373_15828191_15828201_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_18615.nnic	chr1	+	1417	3	NNC	ENSG00000186205.13	novel	7287	7	NA	NA	-55	1012	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	80.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTGTGATAACTAATTA	-42	True	NA	NA	False	AAAAAG	-10	NA	220786857	220792676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_220787220_220791490_220791665_220791795
transcript_186153.known	chrX	+	2417	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTATTTATTCTTG	0	True	NA	NA	False	TATAAA	-7	NA	16123564	16153518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16124367_16150304_16150657_16152255
transcript_186156.known	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_18	37.1408729628753	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	-41	True	NA	-8	True	AATAAA	-26	NA	16712669	16587998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
transcript_186157.nnic	chrX	-	3880	19	NNC	ENSG00000047230.15	novel	4319	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_18	51.6884362739331	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTTCACCTTTTG	-50	True	NA	-12	True	AATAAA	-22	NA	16712678	16588002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
transcript_186158.nnic	chrX	-	3774	19	NNC	ENSG00000047230.15	novel	4319	19	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	55.0483513618194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTTCACCTTTTG	6947	False	NA	-12	True	AATAAA	-22	NA	16712717	16588002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_186159.known	chrX	-	3526	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_18	49.748410235782	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGCTGAATAATTAAT	6728	False	16712957	NA	False	NA	NA	NA	16712936	16588305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_18616.known	chr1	-	1009	3	FSM	ENSG00000143507.18	ENST00000477026.5	1009	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTCTCCCCCTTTT	-3	True	NA	-27	True	AATAAA	-11	NA	221742089	221702149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_221702678_221706094_221706467_221741980
transcript_186162.nnic	chrX	-	2334	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_18	51.6884362739331	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	-50	True	NA	-6	True	ATTAAA	-19	NA	16712678	16589548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
transcript_186163.nnic	chrX	-	2228	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	55.0483513618194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	6947	False	NA	-6	True	ATTAAA	-19	NA	16712717	16589548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_18618.known	chr1	-	1910	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_8	19.29144888286	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-13	True	NA	-4	True	AATAAA	-24	NA	222589933	222558311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_186181.known	chrX	+	6153	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	33.9926462635671	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	-14	True	NA	8	True	AATAAA	-27	NA	16719611	16765340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
transcript_186186.nic	chrX	+	431	2	ISM	ENSG00000169895.6	ENST00000495743.1	604	3	-222	1215	-63	-1215	5prime_fragment	FALSE	canonical	3	591	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCGTAGAAGAAGGAAAAAT	NA	False	NA	NA	False	AATAAA	-5	NA	16719548	16735306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_16719900_16735226
transcript_186197.known	chrX	-	1904	12	FSM	ENSG00000102054.18	ENST00000404022.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	240.918627598546	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	-10	True	NA	-53	True	NA	NA	NA	16870361	16844689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858823_16862954_16863101_16869075_16869221_16870037
transcript_186199.known	chrX	-	2036	12	FSM	ENSG00000102054.18	ENST00000380084.8	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	228.773336884833	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGTTTTTTTAAA	-21	True	NA	-17	True	AATAAA	-11	NA	16869886	16844653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16869493
transcript_186200.known	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_9	67.0604759751713	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	-11	True	NA	-4	True	AATAAA	-20	NA	16870362	16844340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
transcript_186207.known	chrX	+	4362	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	19.3779816503037	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	10	True	NA	104	True	AGTAAA	-19	NA	16786465	16844519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
transcript_18621.nic	chr1	-	1796	10	NIC	ENSG00000143498.18	novel	1910	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	22.6175939382498	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-13	True	NA	-4	True	AATAAA	-24	NA	222589933	222558311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222584127_222584298_222588442_222588566_222589726
transcript_186223.nic	chrX	+	1208	8	ISM	ENSG00000086712.13	ENST00000380122.10	4362	10	-34	6834	0	-6832	5prime_fragment	FALSE	canonical	3	181	junction_6	13.6993966796993	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTACATATTTTTAGTA	-24	True	NA	19	True	AAAAAG	-41	NA	16786431	16837685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592
transcript_186234.known	chrX	+	9044	9	FSM	ENSG00000188158.17	ENST00000676302.1	9044	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.96452920568771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGGTTTCTCTCTTCAC	-12	True	NA	14	True	AATAAA	-17	NA	17375199	17735994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17376323_17687741_17687895_17692334_17692469_17719343_17719407_17721440_17721634_17724298_17724431_17725346_17728329_17728648_17728776_17731857
transcript_186236.known	chrX	+	8213	9	FSM	ENSG00000188158.17	ENST00000398097.7	8213	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.96452920568771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGACTGCAATTAAACAAC	118	False	NA	-2	True	AATAAA	-1	NA	17635292	17735978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17635601_17687741_17687895_17692334_17692469_17719343_17719407_17721440_17721634_17724298_17724431_17725346_17728329_17728648_17728776_17731857
transcript_186237.known	chrX	+	2679	6	FSM	ENSG00000047634.15	ENST00000380045.7	2679	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.72046505340853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	-3	True	NA	12	True	AATAAA	-20	NA	17737467	17754985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17737681_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_186239.known	chrX	+	2704	6	FSM	ENSG00000047634.15	ENST00000398080.5	2704	6	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	4.1182520563948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTCAGATGTGATTTC	-22	True	NA	15	True	AATAAA	-23	NA	17737448	17754988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17737681_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_186240.known	chrX	-	2187	2	FSM	ENSG00000131831.18	ENST00000451717.6	2187	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGCAGTATTTCATCA	0	True	NA	0	True	AATAAA	-43	NA	17861298	17800048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_17802035_17861097
transcript_186242.known	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	17.421104958044	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	-1	True	NA	-11	True	AATAAA	-19	NA	18354688	18239312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
transcript_186248.known	chrX	-	5077	33	FSM	ENSG00000044446.12	ENST00000379942.5	5077	33	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_4	19.102928440425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGCCAGGAGGTGCG	-9	True	NA	-10	True	AATAAA	-21	NA	18984114	18892297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18899172_18899227_18900669_18900700_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_186254.nic	chrX	-	5079	31	NIC	ENSG00000044446.12	novel	5077	33	NA	NA	-532	228	intron_retention	FALSE	canonical	3	52	junction_26	12.8470057038812	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGCTCCTCTTATAGC	339	False	NA	NA	False	NA	NA	NA	18984646	18892743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_186255.nic	chrX	-	4878	31	NIC	ENSG00000044446.12	novel	5077	33	NA	NA	-559	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_26	12.8470057038812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGGGTTTTCTTGTGCC	312	False	NA	-7	True	AATAGA	-21	NA	18984673	18892971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_186265.known	chrX	-	4803	28	FSM	ENSG00000173698.18	ENST00000379878.7	4803	28	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_24	14.5382518954509	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGGTAATTTTCACAA	-28	True	NA	0	True	AATAAA	-19	NA	19122637	18989308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19040188_19040225_19068716_19068836_19082701_19082747_19122441
transcript_18627.known	chr1	+	8126	28	FSM	ENSG00000154305.18	ENST00000344922.10	8126	28	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	38.6134513901294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCAATTTAAGCTTC	2	True	NA	14	True	ATTAAA	-16	NA	222618096	222668007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_186270.known	chrX	+	3484	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	502.774566244962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_186271.known	chrX	+	3349	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_1	98.6470475990032	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAACCACGCTAATAC	-24	True	NA	76	True	AAAAAG	-19	NA	19343926	19361718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_186272.known	chrX	+	3277	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	400.103042283415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_186276.known	chrX	-	4728	18	FSM	ENSG00000147010.18	ENST00000397821.8	4728	18	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_4	41.5067426881623	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTGTTCAAAGTTGTC	-5	True	NA	-1	True	ATTAAA	-18	NA	19887600	19533976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_19536459_19537716_19537781_19541924_19542194_19545921_19546051_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19683822_19684029_19695611_19695742_19706880_19706985_19746317_19746442_19836124_19836283_19887306
transcript_18628.known	chr1	+	2735	23	FSM	ENSG00000154305.18	ENST00000340535.11	2735	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	50.5591871469338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCTTACAACTTTGAA	-27	True	NA	22	True	AATAAA	-19	NA	222644302	222665823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222644587_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_186281.known	chrX	-	4414	7	FSM	ENSG00000173674.11	ENST00000379607.10	4414	7	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_4	131.466620182548	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTATACAATTGATTCT	-1	True	NA	-6	True	AATAAA	-18	NA	20141838	20124524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
transcript_186287.known	chrX	+	5753	22	FSM	ENSG00000149970.16	ENST00000379510.5	5753	22	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	14.6696039112024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTATAAAGCACCTACTT	-4	True	NA	7	True	AATAAA	-17	NA	21374417	21654689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
transcript_186289.known	chrX	+	5669	21	FSM	ENSG00000149970.16	ENST00000425654.7	5669	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	13.3546808273354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCACCTACTTTATTCA	-4	True	NA	13	True	AATAAA	-23	NA	21374417	21654695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
transcript_186290.known	chrX	+	5040	20	FSM	ENSG00000149970.16	ENST00000645245.1	5040	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	13.648130573234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATATGTAAAAAAAAAAA	0	True	NA	NA	False	ATTAAA	-13	NA	21374467	21654263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
transcript_186291.known	chrX	+	2168	15	FSM	ENSG00000149970.16	ENST00000647423.1	2168	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	17.2397559052751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTAGCTTAACTAAAAGG	72	False	NA	NA	False	AATAAA	-19	NA	21374832	21591467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021
transcript_186292.known	chrX	+	5360	21	FSM	ENSG00000149970.16	ENST00000642359.1	5360	21	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_20	18.0471604414656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAACTGTTCTTTTAAG	7	False	NA	NA	False	AATACA	-23	NA	21374297	21643600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21641532
transcript_1863.known	chr1	-	940	9	FSM	ENSG00000116213.16	ENST00000424367.5	940	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	68.5318128681855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTGTGCTGACGCAGG	15	True	NA	NA	False	NA	NA	NA	3650026	3632212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3632339_3633397_3633504_3634996_3635075_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_186301.known	chrX	+	1429	10	FSM	ENSG00000149970.16	ENST00000642460.1	1429	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	16.3374900228558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGCTTCTAAGTGG	179	False	NA	NA	False	NA	NA	NA	21374752	21532195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855
transcript_186302.known	chrX	+	3808	6	FSM	ENSG00000149970.16	ENST00000644832.1	3808	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	4.02988833592198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATTAGCAGAAAAT	0	True	NA	NA	False	TTTAAA	-2	NA	21374421	21493229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458
transcript_186303.known	chrX	+	4446	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	10.3653268158799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	-6	True	NA	20	True	AATAAA	-32	NA	21839616	21885423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
transcript_186305.known	chrX	+	4457	7	FSM	ENSG00000012174.12	ENST00000365779.2	4457	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	11.0867789130417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCTGGAAGTGCTTG	-9	True	NA	NA	False	AATAAA	-16	NA	21839653	21873084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497
transcript_186307.known	chrX	+	1703	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	480.817231388394	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	-13	True	NA	15	True	ATTAAA	-16	NA	21940708	21994837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_18632.nic	chr1	+	767	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-13	18173	-11	-18173	5prime_fragment	FALSE	canonical	3	148	junction_1	5.55777733351102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAATAGTTCTCAGGTC	-9	True	NA	NA	False	GATAAA	-32	NA	222618085	222627962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_186320.known	chrX	+	1174	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	680.826324678328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTTTTAATTTAAAAA	-7	True	NA	NA	False	NA	NA	NA	21940714	21994473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_186324.nic	chrX	+	602	3	ISM	ENSG00000102172.16	ENST00000404933.7	1703	11	-222	22847	-222	-5999	5prime_fragment	FALSE	canonical	3	1489	junction_2	37	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTTTTTCACTTTCATT	NA	False	NA	NA	False	NA	NA	NA	21940486	21971990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_21940874_21967195_21967317_21971896
transcript_186328.known	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2342	junction_6	326.478006746073	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	-5	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
transcript_18633.nic	chr1	+	836	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-13	18104	-11	-18104	5prime_fragment	FALSE	canonical	3	148	junction_1	5.55777733351102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTAGACTTGAAAACC	-9	True	NA	NA	False	TATAAA	-17	NA	222618085	222628031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_186332.known	chrX	+	852	3	FSM	ENSG00000123131.13	ENST00000379331.3	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	2557	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTTACACAGTTATATA	0	True	NA	NA	False	TTTAAA	-12	NA	23667550	23675462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23667812_23671528_23671647_23674989
transcript_186335.known	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	64.4871842987078	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	-25	True	NA	-12	True	AATAAA	-21	NA	23743276	23703670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_186337.nic	chrX	-	1582	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	60.2841398279257	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	-36	True	NA	-18	True	AATAAA	-15	NA	23743287	23703676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_18634.nic	chr1	+	1261	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-13	17679	-11	-17679	5prime_fragment	FALSE	canonical	3	148	junction_1	5.55777733351102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGATGATGATGCATT	-9	True	NA	NA	False	AAGAAA	-3	NA	222618085	222628456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_186343.nic	chrX	-	902	9	ISM	ENSG00000123130.17	ENST00000336430.11	1675	15	-30	4169	-16	-9	5prime_fragment	FALSE	canonical	0	0	junction_7	79.4052107861946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATTAATTACGCTGCAG	2587	False	NA	-9	True	AATAAA	-14	NA	23743306	23707839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_186344.nic	chrX	-	837	8	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	105.379392323787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCTGCAGAAGAGATTA	2587	False	NA	0	True	AATAAA	-23	NA	23743306	23707830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_23707945_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_186346.known	chrX	-	1682	15	FSM	ENSG00000123130.17	ENST00000494361.5	1682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	64.4871842987078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAACAATAAATACTTT	-39	True	NA	-46	True	GGGGCT	-16	NA	23743290	23703704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733212_23735885_23736017_23743124
transcript_186347.known	chrX	+	1049	6	FSM	ENSG00000130066.17	ENST00000379270.5	1049	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	36.351616195157	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	1	True	NA	23	True	AATAAA	-17	NA	23783172	23786210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685
transcript_186348.known	chrX	-	1122	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_1	49.7418335005858	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	-17	True	NA	-4	True	ATTAAA	-21	NA	23907938	23833352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_186349.nic	chrX	-	1030	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	63.0590001506526	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	-34	False	NA	-11	True	ATTAAA	-14	NA	23907955	23833359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_186353.known	chrX	-	916	8	FSM	ENSG00000184831.14	ENST00000490078.2	916	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	114.352480497444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAAATCCGAT	18	True	NA	-18	True	ATTAAA	-7	NA	23907903	23833366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
transcript_186363.nnic	chrX	+	2242	12	NNC	ENSG00000130741.11	novel	3457	12	NA	NA	-199	60	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_11	395.375101738059	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCGTCTTTGAGTACCT	96	False	NA	29	True	AATAAA	-18	NA	24054746	24077468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073182_24076721
transcript_186366.known	chrX	+	3457	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_4	136.448700740917	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATCTAACATGTCCC	5	True	NA	25	True	AATAAA	-21	NA	24054955	24078810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
transcript_186374.known	chrX	+	7612	10	FSM	ENSG00000005889.16	ENST00000304543.10	7612	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10.1336744581959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCATCTGTACCGACTT	-14	True	NA	NA	False	NA	NA	NA	24149728	24216255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24149795_24151690_24151801_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
transcript_186376.nic	chrX	+	1958	9	ISM	ENSG00000005889.16	ENST00000304543.10	7612	10	-442	7248	114	6	5prime_fragment	FALSE	canonical	3	17	junction_1	10.7463656647259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACCTGATTCCAGG	305	False	NA	NA	False	AAGAAA	-2	NA	24149286	24209007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_24149795_24151690_24151801_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_186380.nic	chrX	+	1597	7	NIC	ENSG00000005889.16	novel	7513	9	NA	NA	-202	6	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	10.0443461155462	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACCTGATTCCAGG	445	False	NA	NA	False	AAGAAA	-2	NA	24149426	24209007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_24149795_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_186381.known	chrX	+	12720	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	27.902723585182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	10	True	NA	17	True	AATAAA	-18	NA	24465285	24550466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
transcript_186386.known	chrX	+	1741	11	FSM	ENSG00000067992.17	ENST00000379162.9	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_7	21.6785608378416	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGATTCCACTTATGT	10	True	NA	6	True	AATAAA	-20	NA	24465285	24534422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928
transcript_186389.known	chrX	-	5558	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	2.35606035749581	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	-21	True	NA	-1	True	AATAAA	-17	NA	24647347	24558086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_18639.known	chr1	-	2975	10	FSM	ENSG00000186063.13	ENST00000340020.11	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_5	42.2847490237319	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-12	True	NA	0	True	ATTAAA	-16	NA	222712491	222668012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222712207
transcript_186391.known	chrX	-	856	7	FSM	ENSG00000102230.14	ENST00000496020.1	856	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.401988965014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCACCTTCTCATGGCT	6	True	NA	NA	False	NA	NA	NA	24647038	24562400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_186392.known	chrX	+	5440	37	FSM	ENSG00000101868.13	ENST00000379059.7	5440	37	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	31.0530708606499	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	27	True	NA	24	True	AATAAA	-17	NA	24693946	24996986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24693987_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
transcript_186395.known	chrX	+	1803	12	FSM	ENSG00000101868.13	ENST00000678847.1	1803	12	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_11	11.7431182590605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTGATAGAATGAAAATC	NA	False	NA	NA	False	TTTAAA	-19	NA	24693872	24724848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334
transcript_186397.known	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	-58	True	NA	NA	NA	24789069	24788391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_24788400_24789100
transcript_186399.known	chrX	-	1813	2	FSM	ENSG00000169297.8	ENST00000378970.5	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGGGTTTAAGTAAGGC	-1	True	NA	NA	False	AATAAA	-40	NA	30309390	30304205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_30304824_30308195
transcript_186400.known	chrX	+	4515	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	13.9481181526398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGAATTTGTAAATCA	14	True	NA	NA	False	AATAAA	-16	NA	30653422	30731462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_186404.known	chrX	+	3638	20	FSM	ENSG00000198814.14	ENST00000378946.7	3638	20	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_19	22.3476683917691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	535	False	NA	NA	False	AATAAA	-18	NA	30653358	30730608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30728731
transcript_186407.known	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	20.8200308407679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	535	False	NA	NA	False	AATAAA	-18	NA	30653358	30730608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_186411.known	chrX	-	4645	17	FSM	ENSG00000198947.18	ENST00000378723.7	4645	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	8.84943501021393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGGACTGCAGTACTT	3	True	NA	NA	False	AATAAA	-27	NA	31266952	31119218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931_31177971_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_186413.known	chrX	-	2224	16	FSM	ENSG00000198947.18	ENST00000361471.8	2224	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	12.0288541986896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAATTTATAACAG	-1	True	NA	NA	False	NA	NA	NA	31266907	31121555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_186414.known	chrX	-	1400	9	FSM	ENSG00000198947.18	ENST00000681654.1	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	6.86931583201704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTAATTGCCTTA	-8	True	NA	NA	False	NA	NA	NA	31266963	31178421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_186415.known	chrX	-	2689	3	FSM	ENSG00000198947.18	ENST00000681870.1	2689	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTCCCGGAGTACCGG	3	True	NA	NA	False	AATAAA	-16	NA	31266952	31237711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31240196_31260954_31261017_31266809
transcript_186416.known	chrX	+	1663	4	FSM	ENSG00000130962.18	ENST00000463135.1	1663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	20.8326666559997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTCCAGTTGATGC	49	False	NA	NA	False	AATAAA	-21	NA	37349378	37442224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37440790
transcript_186418.known	chrX	+	4400	4	FSM	ENSG00000130962.18	ENST00000378628.9	4400	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	34	True	NA	25	True	AATAAA	-18	NA	37349363	37457291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37453135
transcript_186421.known	chrX	-	719	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	37.7392368762274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAATTTGTCAGTGTAT	214	False	NA	-5	True	ACTAAA	-24	NA	37847408	37840542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
transcript_186422.known	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	10.256095748383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	-1	True	NA	0	True	AATAAA	-21	NA	37847571	37838835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_186427.known	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	8.90415355984408	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	-2	True	NA	0	True	AATAAA	-21	NA	38220871	38149338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_18643.known	chr1	+	782	2	FSM	ENSG00000162819.12	ENST00000496267.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTAGGCATTTCATA	0	True	NA	107	True	AATAAA	-17	NA	222712558	222713985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222712943_222713587
transcript_186430.known	chrX	-	1780	9	FSM	ENSG00000101955.15	ENST00000538295.5	1780	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.5378354085412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGAACTCACTTTGTTTG	NA	False	NA	3	True	AATAAA	-24	NA	38220924	38149335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_38149895_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_186432.known	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	9.85199108784928	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	-1	True	NA	NA	False	AATAAA	-27	NA	38327509	38269162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_18644.nic	chr1	-	369	2	ISM	ENSG00000186063.13	ENST00000355727.3	1072	8	-79	33542	-16	-29775	5prime_fragment	FALSE	canonical	3	522	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACCATAAAATAATCTCT	-28	True	NA	NA	False	NA	NA	NA	222712507	222703148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_222703218_222712207
transcript_186441.known	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	24.7839645327212	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	0	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_186445.known	chrX	+	3781	3	FSM	ENSG00000165175.17	ENST00000614558.3	3758	3	-27	4	-8	-4	multi-exon	FALSE	canonical	3	18	junction_1	208.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAATTTTGTGTTCT	-5	True	NA	23	True	AATAAA	-25	NA	38801431	38806528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38801488_38802534_38804414_38804682
transcript_186448.known	chrX	+	1889	3	FSM	ENSG00000165175.17	ENST00000378474.3	1889	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	217	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTCAACTAAATTGGACA	-9	True	NA	-72	True	AATAAA	-9	NA	38801453	38806433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38801488_38804309_38804414_38804682
transcript_186450.known	chrX	+	1812	2	FSM	ENSG00000165175.17	ENST00000457894.5	1812	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACAAGCGTCTGGTCCT	3	True	NA	-59	True	AATAAA	-22	NA	38801439	38806446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38801488_38804682
transcript_186452.known	chrX	+	4814	2	FSM	ENSG00000165175.17	ENST00000336949.7	4814	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTCTCTCTGGTAT	-8	True	NA	32	True	AATAAA	-34	NA	38801454	38806537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38804414_38804682
transcript_186453.known	chrX	+	2691	2	FSM	ENSG00000223486.1	ENST00000447651.1	2691	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGAGAAAACACTCCGCAT	17	False	NA	NA	False	AATAAA	-33	NA	40009275	40012182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40009802_40010017
transcript_186456.known	chrX	+	2242	9	FSM	ENSG00000182220.15	ENST00000636580.2	2242	9	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_6	58.0425490480906	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGCATACTTTATGT	3	True	NA	NA	False	NA	NA	NA	40580969	40606848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_186458.known	chrX	+	1962	8	FSM	ENSG00000182220.15	ENST00000636409.1	1962	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	330.479676117202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAATGTCTATCAAGAG	NA	False	NA	-18	True	NA	NA	NA	40580893	40606588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_186459.known	chrX	+	1929	8	FSM	ENSG00000182220.15	ENST00000637327.1	1929	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	314.472541872636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAAATAAAGTTAATG	NA	False	NA	0	True	NA	NA	NA	40580909	40606606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_186460.known	chrX	+	1187	7	FSM	ENSG00000182220.15	ENST00000636970.1	1187	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	429.586623007126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAATGAATTTGGAAAT	-7	True	NA	NA	False	NA	NA	NA	40580959	40606010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_186461.known	chrX	+	2022	9	FSM	ENSG00000182220.15	ENST00000378438.9	2022	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	303.22104148624	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGATGATTCCAAATT	-9	True	NA	13	True	AATAAA	-1	NA	40580957	40606619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_186462.known	chrX	+	1995	9	FSM	ENSG00000182220.15	ENST00000635774.1	1995	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	314.430338071885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAATATTAAGTGGAAG	-30	True	NA	-67	True	NA	NA	NA	40580936	40606539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598651_40598735_40599591_40599742_40600761_40600882_40605560
transcript_186463.known	chrX	+	3593	2	FSM	ENSG00000182220.15	ENST00000637954.1	3593	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGACCCTATCTCTAGG	28	True	NA	NA	False	NA	NA	NA	40580994	40592470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985
transcript_186464.known	chrX	-	4244	7	FSM	ENSG00000185753.13	ENST00000327877.10	4244	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	7.9320026895272	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGTGTCGCATTTCC	-18	True	NA	2	True	AATAAA	-20	NA	40647561	40626920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_40630163_40630613_40630774_40636532_40636713_40637006_40637157_40639008_40639129_40647006_40647142_40647304
transcript_186478.known	chrX	-	7996	31	FSM	ENSG00000180182.11	ENST00000324817.6	7996	31	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_30	75.487452967732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTGTCACTTGGAGT	-12	True	NA	NA	False	ATTAAA	-16	NA	40735542	40648304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
transcript_18648.known	chr1	+	4691	8	FSM	ENSG00000154309.9	ENST00000675039.1	4691	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.4230748895809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATGCAGCATTCAAT	-21	True	NA	-6	True	AATAAA	-8	NA	222815069	223005969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222815172_222942806_222943333_222983079_222983110_222990624_222990749_222991519_222991648_222992012_222992111_222994884_222994983_223002384
transcript_186493.known	chrX	-	520	5	FSM	ENSG00000180182.11	ENST00000482034.5	520	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	106.189688764964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCGGCTTGTAACCACA	23	True	NA	NA	False	AAAACA	-33	NA	40735858	40713831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735721
transcript_186494.known	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	NA	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40735791_40738192
transcript_186495.known	chrX	+	835	2	FSM	ENSG00000223714.1	ENST00000452501.1	835	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTCTCGGTGGCTCTGT	NA	False	NA	NA	False	AATAAA	-40	NA	41275738	41276778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41275884_41276088
transcript_186497.known	chrX	+	4349	18	FSM	ENSG00000215301.11	ENST00000644073.1	4349	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	240.621384168222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTAGTTGTGTGTTTTTT	444	False	NA	8	True	NA	NA	NA	41334605	41349886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334770_41336082_41336160_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_18650.known	chr1	+	764	5	FSM	ENSG00000154309.9	ENST00000434872.2	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.0558799661761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGTTTTTTTTGGTA	-22	True	NA	16	True	AATAAA	-16	NA	222815068	222837383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222815172_222823883_222823946_222830928_222831043_222835118_222835216_222836995
transcript_186500.known	chrX	+	4554	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_15	124.970605918952	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	13	False	NA	22	True	AATAAA	-19	NA	41334174	41350209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_186503.known	chrX	+	4649	16	FSM	ENSG00000215301.11	ENST00000646940.1	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_14	62.7008417451916	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCTTTGTTGTTGTCA	0	True	NA	18	True	AATAAA	-15	NA	41334161	41350205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
transcript_186507.nic	chrX	+	743	7	ISM	ENSG00000215301.11	ENST00000441189.4	4122	16	0	6536	0	-85	5prime_fragment	FALSE	canonical	3	582	junction_5	49.9046312702761	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGATGGCTTGTGCC	0	True	NA	NA	False	NA	NA	NA	41334161	41343324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215
transcript_186508.known	chrX	+	2129	1	FSM	ENSG00000215301.11	ENST00000622373.1	2129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	448	False	NA	NA	False	NA	NA	NA	41334609	41336738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334600_41336700
transcript_186509.known	chrX	+	4596	17	FSM	ENSG00000215301.11	ENST00000642793.1	4596	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	201.555968886436	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGTAAATAAAGTGCTCT	0	True	NA	-8	True	NA	NA	NA	41334161	41350243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343220_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_186513.known	chrX	+	3931	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	5.22161910928487	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTCGACTCCTGTAT	-4	True	NA	36	True	AATAAA	-19	NA	43656298	43746817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
transcript_186516.known	chrX	-	2570	15	FSM	ENSG00000069535.14	ENST00000378069.5	2570	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.50305935256218	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTCCTTTCTTTTTG	-16	True	NA	NA	False	AATAAA	-16	NA	43882450	43766609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_43767619_43768653_43768717_43769306_43769419_43775174_43775273_43778681_43778740_43780341_43780396_43781447_43781545_43793418_43793579_43795738_43795889_43797124_43797267_43802171_43802264_43803299_43803405_43838867_43839006_43843669_43843765_43882253
transcript_186518.known	chrX	-	3257	15	FSM	ENSG00000183690.13	ENST00000420999.2	3257	15	0	0	0	0	multi-exon	TRUE	non_canonical	2	12	junction_10	4.1057451037714	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTAAGAAGTCTATC	-26	True	NA	NA	False	ATTAAA	-26	NA	44343672	44147871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_44148897_44163921_44164028_44176291_44176385_44178366_44178565_44229648_44229780_44232480_44232678_44235304_44235448_44242120_44242290_44248271_44248411_44248802_44248917_44250193_44250446_44261074_44261299_44272685_44272837_44312567_44312757_44343546
transcript_186523.known	chrX	-	1054	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	31.4195400984801	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTTATGTTGTTT	-8	True	NA	-4	True	ATTAAA	-33	NA	44542859	44523638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
transcript_186527.known	chrX	+	5761	29	FSM	ENSG00000147050.17	ENST00000377967.9	5761	29	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	80.1830176940891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGTATAATAGTAGAAAA	1	True	NA	11	True	AATAAA	-16	NA	44873187	45112602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
transcript_18653.known	chr1	+	543	3	FSM	ENSG00000154309.9	ENST00000450784.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	38	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-21	True	NA	17	True	AATAAA	-17	NA	222815021	222837384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222815079_222835118_222835216_222836995
transcript_18654.known	chr1	-	2989	9	FSM	ENSG00000143502.16	ENST00000366878.9	2989	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.30116263352131	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTTTGAAGCGTGACT	-7	True	NA	NA	False	ATTAAA	-14	NA	223364176	223220830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223222221_223223248_223223632_223227593_223227739_223229196_223229389_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_186541.known	chrX	+	5778	29	FSM	ENSG00000147050.17	ENST00000382899.9	5778	29	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	90.6087406244619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTATAATAGTAG	1	True	NA	7	True	AATAAA	-12	NA	44873187	45112598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
transcript_186543.known	chrX	-	689	2	FSM	ENSG00000231566.3	ENST00000666464.2	692	2	3	0	3	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTGGCTGGGTGTGG	12	True	NA	NA	False	NA	NA	NA	45851532	45848962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_45849473_45851353
transcript_186545.known	chrX	+	2334	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	19.5140974682407	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	4	True	NA	15	True	AATAAA	-16	NA	46447296	46474639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
transcript_186549.known	chrX	+	2078	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTGTGAAAATACTT	124	False	NA	-46	True	AATATA	-20	NA	46545492	46548408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46545628_46546465
transcript_186553.known	chrX	+	2396	2	FSM	ENSG00000147119.4	ENST00000276055.4	2396	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGGTTTAAGAATTT	-16	True	NA	117	True	AAGAAA	-4	NA	46573764	46598496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46575424_46597759
transcript_186556.known	chrX	-	3838	17	FSM	ENSG00000065923.10	ENST00000328306.4	3838	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	12.1679330105815	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTTTCTCTTAATGT	155	False	NA	NA	False	AATACA	-20	NA	46759055	46605317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653724_46662027_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
transcript_186559.known	chrX	+	3700	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	9.36416040016402	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	0	True	NA	101	True	AATAAA	-18	NA	46837042	46882358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
transcript_186561.known	chrX	+	4713	11	FSM	ENSG00000102221.14	ENST00000611250.4	4713	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.0119971213816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	NA	False	NA	15	True	ATTAAA	-16	NA	46912275	47061242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46912341_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
transcript_186562.known	chrX	+	4947	11	FSM	ENSG00000102221.14	ENST00000614628.5	4947	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	14.8016890928029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	-24	True	NA	15	True	ATTAAA	-16	NA	46912420	47061242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46912720_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
transcript_186564.known	chrX	+	1611	7	FSM	ENSG00000130988.13	ENST00000352078.8	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.61743318211757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCCTTTTTATTT	21	False	NA	26	True	AATAAA	-20	NA	47078379	47093313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47078710_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
transcript_186567.known	chrX	+	2041	7	FSM	ENSG00000130988.13	ENST00000457380.5	2041	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	6.79256129077161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTTCCTTTTTATTTT	-4	True	NA	27	True	AATAAA	-21	NA	47078354	47093314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47078710_47080316_47080937_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
transcript_186568.known	chrX	-	586	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	289.5	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	1	True	NA	-6	True	ATTAAA	-17	NA	47144702	47142215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47142441_47142613_47142745_47144472
transcript_186569.known	chrX	-	948	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	149	-328	-4	multi-exon	FALSE	canonical	3	681	junction_1	791.5	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGCTAGTGTTGATT	455	False	NA	-10	True	ATTAAA	-13	NA	47145038	47142219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47142441_47142583_47142745_47144472
transcript_186592.nic	chrX	+	3888	24	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	-494	0	combination_of_known_junctions	TRUE	canonical	3	193	junction_10	47.2633294028064	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	2445	False	NA	28	True	AATAAA	-17	NA	47144726	47186813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_186598.known	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_10	56.9662786199956	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	6	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_186607.nic	chrX	+	3825	24	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	-400	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	71.1105797737973	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	2539	False	NA	28	True	AATAAA	-17	NA	47144820	47186813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_18661.known	chr1	+	3366	21	FSM	ENSG00000162909.18	ENST00000295006.6	3366	21	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_10	17.2808419933752	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAACTTTGATAATCT	19	True	NA	NA	False	ATTAAA	-32	NA	223712538	223776018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223769910_223770446_223770526_223771808_223771926_223772180_223772240_223774833
transcript_186611.known	chrX	+	3201	24	FSM	ENSG00000182872.16	ENST00000329236.8	3201	24	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	77.5324555493767	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCCTCTCCTCTTTC	183	False	NA	27	True	AATAAA	-16	NA	47145446	47186812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_186638.known	chrX	+	3105	23	FSM	ENSG00000182872.16	ENST00000628161.2	3105	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	76.6695307286327	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	15	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_186639.known	chrX	+	3108	23	FSM	ENSG00000182872.16	ENST00000345781.10	3108	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	82.8748434051099	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	15	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_186680.nic	chrX	+	2817	18	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	-427	-1705	combination_of_known_junctions	FALSE	canonical	3	193	junction_10	38.4399950311271	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAATAGCTTCCAGC	2512	False	NA	NA	False	AAAAAG	-5	NA	47144793	47185107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054
transcript_186683.nic	chrX	+	2408	18	ISM	ENSG00000182872.16	ENST00000377604.8	3397	24	-15	1706	-15	-1705	5prime_fragment	FALSE	canonical	3	116	junction_10	51.8027266787134	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAATAGCTTCCAGC	-9	True	NA	NA	False	AAAAAG	-5	NA	47145205	47185107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054
transcript_186726.nic	chrX	+	3650	27	NIC	ENSG00000130985.17	novel	3572	26	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	309.861634037712	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	-4	True	NA	-34	True	AATAAA	-17	NA	47193797	47215128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47194025_47198308_47198356_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_186742.known	chrX	+	3466	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	233.891003674789	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	10	True	NA	-34	True	AATAAA	-17	NA	47190860	47215128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_18675.nnic	chr1	+	2362	10	NIC	ENSG00000162909.18	novel	3366	21	NA	NA	-168	828	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	45.0393517923665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACCCACCTGTAGTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	223712370	223758325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223757368
transcript_186752.known	chrX	+	3572	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	201.537037787103	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	3	True	NA	-34	True	AATAAA	-17	NA	47193828	47215128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_18680.known	chr1	-	4741	19	FSM	ENSG00000143514.17	ENST00000391878.6	4741	19	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_16	75.3032757144955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATAGAAGCCTACTTT	14	True	NA	-20	True	AATAAA	-16	NA	223845930	223779898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223818205_223818338_223821219_223821368_223845653
transcript_186809.nic	chrX	+	2227	17	NIC	ENSG00000102225.17	novel	3151	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	286.816905882481	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCTGTCTGTCTCTG	-52	True	NA	28	True	NA	NA	NA	47218679	47228990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47219106_47222260_47222343_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_18682.known	chr1	-	4632	18	FSM	ENSG00000143514.17	ENST00000343537.12	4632	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_7	24.6945352093161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGCCTACTTTACATTT	-3	True	NA	-14	True	AATAAA	-22	NA	223845947	223779892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223821219_223821368_223845653
transcript_186824.known	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	206.42282388879	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	29	False	NA	28	True	ATTAAA	-17	NA	47218232	47229997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_186836.known	chrX	+	3151	16	FSM	ENSG00000102225.17	ENST00000357227.9	3151	16	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	75.2774423936768	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	-51	True	NA	28	True	ATTAAA	-17	NA	47218680	47229997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47219106_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_186884.known	chrX	+	2968	17	NNC	ENSG00000102225.17	novel	3151	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	232.205424947394	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTGCTTGCAAATCC	-16	True	NA	24	True	ATTAAA	-13	NA	47218715	47229993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_47219106_47223551_47223605_47223748_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_186899.known	chrX	+	3196	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_7	60.3817853329959	2864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCAGTGTGGTTTTTTC	-8	True	NA	35	True	TATAAA	-19	NA	47233008	47248328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_186921.nic	chrX	+	2944	20	NIC	ENSG00000102226.10	novel	3338	21	NA	NA	-17	0	intron_retention	TRUE	canonical	3	605	junction_7	61.3616498927655	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCCT	4141	False	NA	NA	False	NA	NA	NA	47232966	47247952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247420_47247610_47247700_47247792
transcript_18698.known	chr1	+	5427	5	FSM	ENSG00000143756.12	ENST00000366862.10	5427	5	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_1	3.80788655293195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTTCTTTGTATT	1	True	NA	10	True	AATAAA	-17	NA	224114110	224162047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224153141_224153338_224157351
transcript_187.known	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2297	junction_3	8536.74432874588	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_18700.known	chr1	+	628	3	FSM	ENSG00000143756.12	ENST00000483773.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCATTTGTATGATCTTT	61	False	NA	NA	False	TATAAA	-4	NA	224114170	224134365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224114397_224130471_224130582_224134073
transcript_187007.known	chrX	+	2378	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	0	0	0	0	multi-exon	FALSE	non_canonical	3	252	junction_4	28.3498775227611	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	8	True	NA	25	True	NA	NA	NA	47561204	47571908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
transcript_187011.known	chrX	-	3172	13	FSM	ENSG00000008056.14	ENST00000340666.5	3172	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	7.72801541291309	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTGTGCTTCTTGGTG	3	True	NA	-1	True	AATAAA	-18	NA	47619857	47571900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47572962_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
transcript_187012.known	chrX	-	3210	13	FSM	ENSG00000008056.14	ENST00000295987.13	3210	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	15.2552358953319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTGTGCTTCTTGGTG	3	True	NA	-1	True	AATAAA	-18	NA	47619857	47571900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47573000_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
transcript_187013.known	chrX	-	2489	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	3.45506874027131	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCTTTTAGCATTT	-38	True	NA	NA	False	AGTAAA	-16	NA	47629930	47623281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
transcript_187014.known	chrX	+	1271	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	42.0218990527558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	25	False	NA	NA	False	AATAAA	-20	NA	47561221	47565975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
transcript_187015.known	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	35.6033706269505	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	-1	True	NA	26	True	AATAAA	-17	NA	47582435	47586789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_187016.known	chrX	+	626	5	FSM	ENSG00000102265.12	ENST00000377017.5	626	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	262.334114251273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	13	False	NA	26	True	AATAAA	-17	NA	47582449	47586789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47582475_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_18702.known	chr1	+	957	3	FSM	ENSG00000143753.13	ENST00000415210.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACAACCTCCCTCAC	NA	False	NA	NA	False	NA	NA	NA	224175755	224192353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224175948_224189576_224190320_224192331
transcript_187020.known	chrX	-	2876	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	53.7300350517908	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	-3	True	NA	-6	True	AATATA	-16	NA	47650563	47635520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
transcript_187022.known	chrX	-	2695	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	19.6102014268084	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	8670	False	NA	-6	True	AATATA	-16	NA	47650488	47635520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
transcript_187026.known	chrX	-	574	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_6	71.746467199128	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACATGGCCCTTCTTT	-3	True	NA	-6	True	ATTAAA	-17	NA	47659161	47651797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
transcript_187027.nnic	chrX	-	574	7	NNC	ENSG00000126756.12	novel	574	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	195.99014997925	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCACATGGCCCTTC	-28	True	NA	-9	True	ATTAAA	-14	NA	47659186	47651800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_47651896_47652080_47652145_47657204_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
transcript_187029.known	chrX	-	627	5	FSM	ENSG00000126756.12	ENST00000485641.5	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	227.925837719202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCACATGGCCCTTC	3	True	NA	-9	True	ATTAAA	-14	NA	47659107	47651800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657781_47657864_47658829
transcript_187032.known	chrX	-	3586	7	FSM	ENSG00000147118.12	ENST00000396965.5	3586	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	18.1444818670091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTTACTGTTATAG	3	True	NA	-2	True	AATAAA	-15	NA	48003978	47974851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003903
transcript_187033.known	chrX	-	3499	6	FSM	ENSG00000147118.12	ENST00000376943.8	3499	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_5	15.4531550176655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	-8	True	NA	-1	True	AATAAA	-16	NA	48003989	47974850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003908
transcript_187034.known	chrX	-	3475	5	FSM	ENSG00000221994.12	ENST00000276054.9	3475	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	1.92028643696715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTGCAGTTCATGCA	0	True	NA	NA	False	AATAAA	-33	NA	48071640	48057515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071266
transcript_187035.known	chrX	-	2791	5	FSM	ENSG00000221994.12	ENST00000442455.8	2791	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.54835134966506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTGTTTGGTCAT	-18	True	NA	0	True	AATAAA	-24	NA	48071658	48058213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48060200_48060449_48060546_48060818_48060946_48066871_48067062_48071266
transcript_187038.nic	chrX	-	1881	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_15	77.1516832105575	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	1958	False	NA	-12	True	AATAAA	-16	NA	48468312	48458543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468240
transcript_187039.nic	chrX	-	1921	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_15	73.0593061986098	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	-13	True	NA	-12	True	AATAAA	-16	NA	48468416	48458543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
transcript_18704.known	chr1	+	2032	3	FSM	ENSG00000143753.13	ENST00000323699.9	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	25.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	16	True	NA	19	True	AATAAA	-28	NA	224183239	224193441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224183419_224189576_224190320_224192331
transcript_187042.nic	chrX	-	2086	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_15	75.2238141961854	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	1109	False	NA	-12	True	AATAAA	-16	NA	48469161	48458543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
transcript_187046.known	chrX	+	1986	14	FSM	ENSG00000068438.15	ENST00000019019.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	114.446907667076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48476160	48486299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_187048.known	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	59.8198104495678	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	-10	True	NA	15	True	AATATA	-26	NA	48476198	48486350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
transcript_187051.nic	chrX	+	2059	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	72	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48475981	48486299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_187059.nic	chrX	+	2093	12	NIC	ENSG00000068438.15	novel	1899	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	160	junction_9	56.2415099194228	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48476144	48486299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48483028_48485735
transcript_187061.nic	chrX	+	2056	12	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	15	0	intron_retention	FALSE	canonical	3	95	junction_9	70.743162505802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	-33	True	NA	22	True	ATTAAA	-20	NA	48476175	48486299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48483028_48485735
transcript_187068.nic	chrX	+	1619	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	-217	3396	-39	0	5prime_fragment	FALSE	canonical	3	160	junction_9	52.9668764417914	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	NA	False	NA	33	True	TATAAA	-45	NA	48475981	48482954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
transcript_187070.nic	chrX	+	1419	11	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	70.2071221458336	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	-33	True	NA	33	True	TATAAA	-45	NA	48476175	48482954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_187093.known	chrX	+	1867	15	FSM	ENSG00000102312.24	ENST00000326194.11	1867	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	72.0768085207067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187096.nic	chrX	+	1940	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	52.7127978128124	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-25	True	NA	18	True	AATAAA	-17	NA	48508968	48520808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187097.known	chrX	+	2079	14	FSM	ENSG00000102312.24	ENST00000683923.1	2079	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	54.0841990947077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATTCAATAGGCTTC	25	True	NA	6	True	AATAAA	-5	NA	48509018	48520796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509423_48509708_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_18710.known	chr1	-	3003	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	76.4299350493288	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAAAGTTACAGAGA	-27	True	NA	-4	True	AATAAA	-26	NA	224330189	224227336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_187100.nnic	chrX	+	2007	14	NNC	ENSG00000102312.24	novel	2079	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	57.4373855118587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-35	True	NA	18	True	AATAAA	-17	NA	48508958	48520808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_48509104_48509423_48509708_48509856_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187101.nic	chrX	+	1938	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	57.8318312874421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48509104_48509423_48509708_48509892_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187103.known	chrX	+	1848	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	60.8783829843804	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACTGCTCAGAGG	8	True	NA	24	True	AATAAA	-23	NA	48509001	48520814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187104.known	chrX	+	1877	14	FSM	ENSG00000102312.24	ENST00000359882.8	1877	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	69.317125627982	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	-32	True	NA	16	True	AATAAA	-15	NA	48508961	48520806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187110.nic	chrX	+	2227	13	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_1	31.959501282439	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-35	True	NA	18	True	AATAAA	-17	NA	48508958	48520808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48509104_48509423_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187111.nic	chrX	+	2131	13	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	78	junction_2	40.3391008273059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-10	True	NA	18	True	AATAAA	-17	NA	48508983	48520808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48509104_48509423_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187112.nic	chrX	+	1813	13	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	43.0529389885935	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	NA	False	NA	18	True	AATAAA	-17	NA	48508941	48520808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187115.known	chrX	+	2112	12	FSM	ENSG00000102312.24	ENST00000491243.5	2112	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	44.961324059207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	37	True	NA	16	True	AATAAA	-15	NA	48509030	48520806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_187119.known	chrX	+	3785	6	FSM	ENSG00000068354.16	ENST00000376771.9	3785	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	10	True	NA	11	True	AGTAAA	-15	NA	48539713	48562609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48539921_48541332_48541443_48544868_48545024_48558896_48559025_48559157_48559347_48559613
transcript_187121.nnic	chrX	+	2546	6	NNC	ENSG00000068354.16	novel	3785	6	NA	NA	-89	1324	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	14.2492105044455	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCACTGTGGTTTGT	3665	False	NA	NA	False	NA	NA	NA	48539624	48561210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_48539921_48541332_48541514_48544868_48545024_48558896_48559025_48559157_48559347_48559613
transcript_187124.known	chrX	+	796	5	FSM	ENSG00000147155.11	ENST00000498425.1	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	373.276958169132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAAGAAGAACTGAGG	-1	True	NA	NA	False	NA	NA	NA	48521804	48528439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48521908_48523753_48524073_48526988_48527026_48527154_48527286_48528233
transcript_187125.known	chrX	+	1125	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	214.480039863853	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	2	True	NA	15	True	AATAAA	-16	NA	48521807	48528716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_187129.nic	chrX	+	1229	5	ISM	ENSG00000147155.11	ENST00000446158.5	714	6	187	-465	174	0	3prime_fragment	FALSE	canonical	3	20	junction_1	395.319174844833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	-6	True	NA	9	True	AATAAA	-10	NA	48522042	48528710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_48522253_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_187131.known	chrX	+	884	5	FSM	ENSG00000068354.16	ENST00000481090.6	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	14.6522182620926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCCTACTGCCAGGG	33	True	NA	NA	False	NA	NA	NA	48539736	48559886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48539921_48541332_48541443_48558896_48559025_48559157_48559347_48559613
transcript_187135.known	chrX	+	904	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	381.920394192298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	-7	True	NA	9	True	AATAAA	-10	NA	48521798	48528710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
transcript_187138.known	chrX	+	1375	8	FSM	ENSG00000102317.18	ENST00000466764.5	1375	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	473.223595595752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	6	True	NA	NA	False	NA	NA	NA	48574490	48577977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48575814_48576084_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_187143.known	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	TRUE	canonical	3	888	junction_1	77.903073680625	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	-1	True	NA	17	True	AATAAA	-22	NA	48574483	48581162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_187149.known	chrX	+	724	6	FSM	ENSG00000102317.18	ENST00000489344.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	384.572801950424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCAATAATTGGTTCT	7	True	NA	NA	False	NA	NA	NA	48574523	48577735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167_48575284_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_187152.known	chrX	+	5457	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.5614029303394	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTCGGTTAACTTG	-8	True	NA	NA	False	AATAAA	-38	NA	48597491	48608869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_187156.nic	chrX	+	1690	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	48.9499618532241	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTCCCAGCTCTGC	7440	False	NA	11	True	AATAAA	-20	NA	48597473	48605118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_187157.nic	chrX	+	1765	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	48.9499618532241	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	7440	False	NA	26	True	NA	NA	NA	48597473	48605193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_18716.known	chr1	-	2897	23	FSM	ENSG00000143748.18	ENST00000281701.11	2897	23	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	43.6341145253714	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACTATACAGAAAAGT	-10	True	NA	-12	True	AATAAA	-43	NA	224330172	224227344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_187160.nnic	chrX	+	1821	10	NNC	ENSG00000101940.18	novel	5457	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.7214904527135	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	-8	True	NA	26	True	NA	NA	NA	48597491	48605193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_48597655_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_187169.known	chrX	+	2124	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	20.5669638012031	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	-8	True	NA	26	True	NA	NA	NA	48597491	48605193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_18717.known	chr1	-	2832	22	FSM	ENSG00000143748.18	ENST00000391875.6	2832	22	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_21	30.3118336006885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-8	True	NA	-1	True	AATAAA	-29	NA	224330170	224227333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
transcript_187172.nic	chrX	+	1843	9	NIC	ENSG00000101940.18	novel	2124	9	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	47.9472366252738	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	193	False	NA	26	True	NA	NA	NA	48597738	48605193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_18718.known	chr1	-	2566	22	FSM	ENSG00000143748.18	ENST00000469075.5	2566	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	69.3380100463534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTTTACTTTGA	24	True	NA	-36	True	AATAAA	-19	NA	224330138	224227368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_187184.known	chrX	+	2486	8	FSM	ENSG00000101940.18	ENST00000479279.5	2486	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	12.9362644830535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	24	True	NA	26	True	NA	NA	NA	48597808	48605193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_187185.known	chrX	+	2736	6	FSM	ENSG00000101945.17	ENST00000376687.4	2736	6	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	10.571660229122	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATGTGAGGTGCTTGT	-13	True	NA	NA	False	AATAAA	-22	NA	48696733	48709016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48696804_48698901_48699048_48700090_48700754_48706264_48706412_48706497_48706628_48707436
transcript_187189.known	chrX	+	1239	5	FSM	ENSG00000102145.15	ENST00000651144.1	1239	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGTCCTGAAATTGTGG	NA	False	NA	NA	False	AATAAA	-5	NA	48786561	48794297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48786646_48791843_48792222_48792322_48792469_48793171_48793298_48793792
transcript_187194.nic	chrX	+	4126	29	NIC	ENSG00000094631.21	novel	3735	26	NA	NA	-10	0	intron_retention	TRUE	canonical	3	6	junction_1	38.8365228902393	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	156	False	NA	14	True	AATAAA	-19	NA	48801938	48824976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48802023_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_187198.known	chrX	+	4118	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	31.6829599150646	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	1	True	NA	14	True	AATAAA	-19	NA	48802066	48824976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_187204.known	chrX	+	4179	29	FSM	ENSG00000094631.21	ENST00000376619.6	4179	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	39.2185627383935	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	-32	True	NA	14	True	AATAAA	-19	NA	48802033	48824976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802171_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_187205.known	chrX	+	4099	29	FSM	ENSG00000094631.21	ENST00000643374.1	4099	29	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	36.1736881487873	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTACAAGCTGTTAAAAAA	-29	True	NA	-6	True	NA	NA	NA	48802158	48824956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_187209.known	chrX	+	4147	29	FSM	ENSG00000094631.21	ENST00000644068.1	4147	29	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	36.4048942661644	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	-20	True	NA	14	True	AATAAA	-19	NA	48802167	48824976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_187240.known	chrX	+	591	6	FSM	ENSG00000094631.21	ENST00000441703.6	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.3981273079871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCATGGTCTCT	-2	True	NA	NA	False	NA	NA	NA	48802185	48805745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_187241.known	chrX	+	826	2	FSM	ENSG00000187682.2	ENST00000636362.1	826	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCATTTGACATGAGAC	3141	False	NA	NA	False	AAGAAA	-28	NA	48826512	48829869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48826550_48829080
transcript_187242.known	chrX	-	1025	3	FSM	ENSG00000102109.9	ENST00000218230.6	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	31	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCTTGTCTGTGTG	-22	True	NA	-8	True	AATAAA	-15	NA	48835610	48831095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48831456_48831868_48832342_48835418
transcript_187250.known	chrX	+	784	7	FSM	ENSG00000102103.18	ENST00000470062.5	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	140.207782316896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCTGGGTTAAAATAAA	66	False	NA	-20	True	NA	NA	NA	48897995	48903098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
transcript_187251.known	chrX	+	917	7	FSM	ENSG00000102103.18	ENST00000443648.6	917	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	86.1291020632528	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	111	False	NA	25	True	AATAAA	-26	NA	48898040	48903143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_187253.known	chrX	+	938	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	55.4366505321364	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	22	False	NA	25	True	AATAAA	-26	NA	48897951	48903143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_187255.known	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	418.644538958769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	0	True	NA	-7	True	TTTAAA	-14	NA	48897790	48893452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
transcript_187256.known	chrX	-	964	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	401.362851904469	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	5	True	NA	-1	True	TTTAAA	-20	NA	48897762	48893446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
transcript_187260.known	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	153.683310739976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	6	False	NA	24	True	AATAAA	-25	NA	48897911	48903142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_187263.known	chrX	+	664	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	143.533132063646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	10	True	NA	24	True	AATAAA	-25	NA	48897939	48903142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_187265.known	chrX	-	950	7	FSM	ENSG00000126768.12	ENST00000376582.7	950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	348.531681964973	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	-1	True	TTTAAA	-20	NA	48898143	48893446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897723_48897822_48898066
transcript_187267.nnic	chrX	-	742	5	NIC	ENSG00000126768.12	novel	950	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	397.31811876631	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGACTCCTTGAAC	-2	True	NA	-3	True	TTTAAA	-18	NA	48897792	48893448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
transcript_187270.known	chrX	+	965	7	FSM	ENSG00000102103.18	ENST00000396763.6	962	7	-4	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	142.771865420171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	22	False	NA	24	True	AATAAA	-25	NA	48898255	48903142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898347_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_187271.known	chrX	-	865	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	67.7140125823304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	0	True	NA	-5	True	AATAAA	-18	NA	48911646	48903183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
transcript_187272.known	chrX	-	1456	5	FSM	ENSG00000102100.16	ENST00000247138.11	1456	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	59.3143110893147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	0	True	NA	-4	True	AATAAA	-19	NA	48911646	48903182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48903466_48904745_48905483_48906391_48906544_48909813_48909997_48911545
transcript_187273.known	chrX	-	1739	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	59.4100627466051	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	7875	False	NA	-1	True	AATAAA	-18	NA	48911669	48903612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
transcript_187274.known	chrX	-	3047	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	20.0166597280032	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	7586	False	NA	-5	True	AATAAA	-18	NA	48911958	48903183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
transcript_187275.known	chrX	-	903	3	FSM	ENSG00000102100.16	ENST00000376512.2	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGTGTTGTGAGAATT	7867	False	NA	NA	False	TTTAAA	-27	NA	48911677	48905955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48906544_48909813_48909997_48911545
transcript_187276.known	chrX	-	706	4	FSM	ENSG00000102100.16	ENST00000635460.1	706	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.9691291843632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	7910	False	NA	-5	True	AATAAA	-18	NA	48911634	48903183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48903466_48906391_48906544_48909813_48909997_48911545
transcript_187279.known	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	TRUE	canonical	3	1093	junction_1	94.5993657484023	1765	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	-1	True	NA	-16	True	AATAAA	-17	NA	48919024	48913181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
transcript_18728.known	chr1	+	4096	5	FSM	ENSG00000143771.12	ENST00000465271.6	4096	5	0	0	0	0	multi-exon	FALSE	canonical	3	3732	junction_1	68.2678548073689	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-15	True	NA	NA	False	AATAAA	-24	NA	224356878	224379452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224375794
transcript_18729.known	chr1	+	808	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	1612.38929852564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-1	True	NA	NA	False	AATAAA	-24	NA	224356892	224379452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
transcript_187290.nic	chrX	-	2295	12	NNC	ENSG00000068308.15	novel	2682	10	NA	NA	-291	309	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	152.656368822754	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACTAATCAAAAATGATA	-23	True	NA	-31	True	ATTAAA	-21	NA	48957922	48922633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976_48957441_48957472_48957481_48957520
transcript_187295.known	chrX	-	2487	11	NNC	ENSG00000068308.15	novel	2682	10	NA	NA	-263	303	intron_retention	FALSE	non_canonical	0	0	junction_9	143.709046340166	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATCAACTAATCAAAA	5	True	NA	25	True	ATTAAA	-15	NA	48957894	48922639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976_48957441_48957472_48957481_48957520
transcript_187313.known	chrX	-	4718	6	FSM	ENSG00000102057.10	ENST00000218176.4	4718	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	6.5299310869258	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGAGAGTATCTCCTGG	5	True	NA	-8	True	AATAAA	-19	NA	48971844	48961379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48962807_48966054_48966306_48966577_48966677_48966760_48966845_48966943_48967107_48969150
transcript_187327.known	chrX	-	3031	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_16	30.8562084514608	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	-2	True	NA	-6	True	NA	NA	NA	49002264	48973722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_187330.nnic	chrX	-	3103	26	NNC	ENSG00000068400.13	novel	3031	26	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	66.5807659913882	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-6	True	NA	NA	NA	49002306	48973722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983471_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_18734.known	chr1	+	912	5	FSM	ENSG00000143771.12	ENST00000366860.9	912	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	1898.5658403121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGATTTCTAGTTC	-7	True	NA	45	True	TATAAA	-24	NA	224356886	224375998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224364108_224364456_224365878_224365992_224371282_224371424_224375794
transcript_187341.nic	chrX	-	3781	25	NIC	ENSG00000068400.13	novel	3031	26	NA	NA	-42	0	intron_retention	FALSE	canonical	3	229	junction_15	30.9026248435666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-6	True	NA	NA	NA	49002306	48973722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48974286_48975154_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_187345.known	chrX	-	2881	24	FSM	ENSG00000068400.13	ENST00000622599.4	2881	24	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_21	68.4600527897643	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	13	False	NA	-6	True	NA	NA	NA	49002249	48973722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48999237_48999300_48999437_48999505_49002187
transcript_187356.nic	chrX	-	767	8	ISM	ENSG00000068400.13	ENST00000376423.8	3031	26	-42	16962	-42	325	5prime_fragment	FALSE	canonical	3	267	junction_7	29.5317193705275	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGCTGCTTGGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	49002306	48990684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_187359.nic	chrX	-	662	7	ISM	ENSG00000068400.13	ENST00000376423.8	3031	26	-42	17260	-42	27	5prime_fragment	FALSE	canonical	3	267	junction_6	29.617937507906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAATGGAGAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	49002306	48990982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_18736.known	chr1	+	3963	4	FSM	ENSG00000143771.12	ENST00000366857.9	3963	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	1624.13819882696	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-23	True	NA	NA	False	AATAAA	-24	NA	224356870	224379452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224375794
transcript_18737.known	chr1	+	1525	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1806.96731815738	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGTTTGTGGTTTAAT	-6	True	NA	11	True	AATAAA	-19	NA	224356887	224376884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
transcript_187384.known	chrX	-	3279	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	59.5223788187847	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	104	False	NA	-1	True	AATAAA	-38	NA	49043410	49028725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
transcript_187386.known	chrX	-	3291	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_8	41.0016560942255	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	-3	True	NA	-1	True	AATAAA	-38	NA	49043357	49028725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
transcript_187397.nnic	chrX	+	4084	10	NNC	ENSG00000147144.13	novel	2752	10	NA	NA	-55	0	intron_retention	FALSE	canonical	2	6	junction_2	10.3923048454133	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGCTGCTCTGTCTG	-2	True	NA	16	True	AATAAA	-17	NA	49053516	49069857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_49053878_49061958_49062002_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_187400.known	chrX	+	2752	10	FSM	ENSG00000147144.13	ENST00000597275.5	2752	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.8133634311129	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTCTTGTCTGT	-1	True	NA	NA	False	NA	NA	NA	49053571	49068464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49053878_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_187402.known	chrX	+	2381	10	FSM	ENSG00000147144.13	ENST00000536628.3	2381	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.7014012079688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACATCTCATGCCCCTTG	14	True	NA	NA	False	NA	NA	NA	49059014	49068354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49059096_49061958_49062118_49062234_49062290_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_187403.nic	chrX	+	3969	10	NIC	ENSG00000147144.13	novel	2415	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	12.7540843131393	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGCTGCTCTGTCTG	5393	False	NA	16	True	AATAAA	-17	NA	49058965	49069857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_49059096_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_187404.known	chrX	+	2415	10	FSM	ENSG00000147144.13	ENST00000496529.6	2415	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.4421485642992	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCCGGGAGGAAGGGAC	5393	False	NA	NA	False	NA	NA	NA	49058965	49068339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49059060_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_18741.known	chr1	+	2539	6	FSM	ENSG00000143786.8	ENST00000272133.4	2539	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1.93907194296653	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	2	True	NA	17	True	ATTAAA	-18	NA	224616316	224740554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224617256_224680957_224681027_224684795_224684844_224730461_224730575_224734562_224734707_224739328
transcript_187413.known	chrX	-	1381	11	FSM	ENSG00000196998.19	ENST00000376368.7	1381	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	57.8796164465522	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGTGCCCACTTTC	160	False	NA	-66	True	NA	NA	NA	49079929	49074703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_187419.known	chrX	-	1444	11	FSM	ENSG00000196998.19	ENST00000322995.13	1444	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	60.9695825801686	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	0	True	NA	-2	True	AATAAA	-18	NA	49079898	49074639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_187420.nic	chrX	-	1341	11	NIC	ENSG00000196998.19	novel	1444	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	56.7587878658451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	-20	True	NA	-2	True	AATAAA	-18	NA	49079918	49074639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075664_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_187431.known	chrX	-	1146	10	FSM	ENSG00000196998.19	ENST00000396681.9	1146	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	70.7265644123921	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCTAGGGACCTGCAG	-4	True	NA	NA	False	NA	NA	NA	49079902	49074791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075454_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
transcript_18744.nnic	chr1	+	2755	5	NIC	ENSG00000143786.8	novel	2539	6	NA	NA	-264	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	9.7082439194738	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	25	False	NA	17	True	ATTAAA	-18	NA	224616052	224740554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_224617256_224680957_224681027_224730461_224730575_224734562_224734707_224739328
transcript_187450.known	chrX	-	872	8	FSM	ENSG00000196998.19	ENST00000475880.6	872	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	69.1762021129775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCCCCTCCCCACC	18	True	NA	NA	False	NA	NA	NA	49079880	49075363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077836_49077912_49078040_49078113_49079750
transcript_18746.known	chr1	+	968	3	FSM	ENSG00000143786.8	ENST00000483512.5	968	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTTTGGTTGGAACTC	37	False	NA	NA	False	NA	NA	NA	224434911	224521555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224435188_224515740_224515877_224520999
transcript_187460.known	chrX	-	1260	3	FSM	ENSG00000243279.4	ENST00000553851.3	1260	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCCTCCTGGGTAAAG	4	True	NA	-4	True	AATAAA	-24	NA	49074002	49071160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49072009_49072432_49072651_49073808
transcript_187461.known	chrX	-	801	2	FSM	ENSG00000243279.4	ENST00000376386.3	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCTCGGTGCCGCCCAC	6100	False	NA	NA	False	NA	NA	NA	49073989	49072030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49072651_49073808
transcript_187464.known	chrX	-	1658	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	7.52661942707349	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAATAGAAAGATGAAATC	-3	True	NA	-22	True	AATAAA	-15	NA	49123735	49113406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
transcript_187467.known	chrX	+	642	5	FSM	ENSG00000269313.5	ENST00000612119.1	642	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.12132034355964	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGCCGCCGATGGCCC	1331	False	NA	NA	False	NA	NA	NA	49163995	49166213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49164030_49164706_49164790_49164862_49165091_49165189_49165362_49166088
transcript_18747.known	chr1	+	778	4	FSM	ENSG00000143786.8	ENST00000498126.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGTGCATGTTGTCCTTG	50	False	NA	NA	False	ATTAAA	-16	NA	224434924	224521222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224435188_224513780_224513937_224515740_224515877_224520999
transcript_187471.known	chrX	-	2795	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	12.4442506805352	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGGGAGTTGGTCT	-7	True	NA	-12	True	AATAAA	-18	NA	49186373	49174801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
transcript_187476.nic	chrX	-	3475	9	NIC	ENSG00000012211.13	novel	2795	9	NA	NA	0	69	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	26.9293055981769	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTTTCTATTTTTG	-7	True	NA	-2	True	CATAAA	-21	NA	49186373	49175551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49184825
transcript_18748.known	chr1	-	7367	14	FSM	ENSG00000162923.17	ENST00000414423.9	7367	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	21.2689177887669	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTGGTGTGTTACAT	-11	True	NA	NA	False	AATAAA	-18	NA	224434797	224385145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431476_224431582_224431681_224431782_224433683
transcript_187487.known	chrX	+	1103	5	FSM	ENSG00000102007.11	ENST00000376327.6	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	6.37867541108654	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGAGGCCCGGTGCGGTGG	-4	True	NA	NA	False	ATTAAA	-19	NA	49171897	49175235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49172097_49173128_49173282_49173387_49173484_49174334_49174426_49174671
transcript_18749.known	chr1	-	6502	14	FSM	ENSG00000162923.17	ENST00000651911.2	6502	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	20.3513516699235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATACCTAAATAATT	3038	False	NA	NA	False	AATAAA	-3	NA	224433995	224385160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431524_224431582_224431681_224431782_224433683
transcript_187490.known	chrX	-	547	3	FSM	ENSG00000012211.13	ENST00000611313.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGATGGAAGAGTGGTC	-26	True	NA	NA	False	GGGGCT	-42	NA	49186392	49183593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49183918_49184624_49184711_49186255
transcript_187491.known	chrX	-	2421	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	4.6696419087073	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCCGGCTCTGATTTC	-2	True	NA	-10	True	AATAAA	-16	NA	49200193	49187814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_187492.known	chrX	-	761	5	FSM	ENSG00000102003.12	ENST00000472598.5	761	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	15.5141064841002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATCTGTCTGAGCC	102	False	NA	NA	False	TATAAA	-3	NA	49200176	49189136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49198967_49199034_49200150
transcript_187493.known	chrX	-	1850	6	FSM	ENSG00000102003.12	ENST00000479808.5	1850	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	49200199	49190541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_187504.known	chrX	+	3477	4	FSM	ENSG00000049769.14	ENST00000055335.11	3477	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	7.1336448530109	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACACCACATATTTATT	-11	True	NA	NA	False	AATAAA	-17	NA	49269792	49288090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49270874_49281405_49281462_49281980_49282064_49285833
transcript_187506.known	chrX	+	2310	17	FSM	ENSG00000101997.13	ENST00000376227.4	2310	17	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	4.58087055045217	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	-2	True	NA	27	True	AATAAA	-18	NA	49235469	49250520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243185_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
transcript_187507.known	chrX	+	790	5	FSM	ENSG00000101951.17	ENST00000218068.7	790	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.26917420765551	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTAGAAGTGATGATGA	-3	True	NA	NA	False	NA	NA	NA	49829302	49834264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49829352_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_187509.known	chrX	+	9863	15	FSM	ENSG00000171365.17	ENST00000376091.8	9863	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	5.04874201344923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCTGGTGTGTTT	14	True	NA	16	True	AATAAA	-16	NA	49922595	50099230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49922793_49923406_49923483_49925170_49925315_50042315_50042463_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
transcript_187512.known	chrX	+	10108	15	FSM	ENSG00000171365.17	ENST00000376088.7	10108	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	6.05754715631834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTGTGTTTCTAAA	-16	True	NA	21	True	AATAAA	-21	NA	49922614	50099235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49922793_49923406_49923742_49925170_49925315_50042315_50042463_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
transcript_187513.known	chrX	+	2660	12	FSM	ENSG00000171365.17	ENST00000376108.7	2660	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5.54023599461549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGTTAGGCTTCCATGA	16	False	NA	NA	False	NA	NA	NA	50067575	50092406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_50067761_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
transcript_187515.known	chrX	-	7494	28	FSM	ENSG00000274588.2	ENST00000611977.2	7494	28	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_17	3.59850601525663	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCCGTGCCTCATCAT	-1	True	NA	-20	True	AATAAA	-42	NA	50470825	50365408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_50369020_50370425_50370550_50371723_50371835_50374970_50375058_50376023_50376166_50376757_50376919_50378097_50378233_50378577_50378692_50379626_50379735_50379980_50380078_50382495_50382604_50384167_50384265_50384719_50384825_50386357_50386587_50387553_50387654_50388526_50388619_50390327_50390410_50391436_50391577_50392340_50392450_50393151_50393336_50401036_50401140_50403060_50403184_50403490_50403598_50404048_50404185_50420402_50420508_50422445_50422527_50424247_50424359_50470033
transcript_187518.known	chrX	-	9711	9	FSM	ENSG00000158352.18	ENST00000376020.9	14557	9	0	4846	0	5	multi-exon	FALSE	canonical	1	2	junction_7	3.6721077053921	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTACTTAGGAATA	115	False	50814225	NA	False	AAGAAA	-45	NA	50814194	50591641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_50596965_50598265_50598536_50602632_50602814_50607380_50608185_50627613_50627676_50633177_50635669_50638173_50638309_50695785_50695938_50813901
transcript_187519.known	chrX	+	1925	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	1	True	NA	NA	False	AATAAA	-15	NA	51332821	51337525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51333460_51336238
transcript_187520.known	chrX	-	2381	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGAGTTTACTTGTA	-5	True	NA	-13	True	AATAAA	-15	NA	51496592	51490010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_51491750_51495950
transcript_187523.known	chrX	-	1893	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGATACTCTTTCCA	1	True	NA	-8	True	AATAAA	-31	NA	51618912	51617019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_51617000_51618900
transcript_187524.known	chrX	-	1620	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51682831	51681211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_51681200_51682800
transcript_187525.known	chrX	+	1620	1	FSM	ENSG00000223591.5	ENST00000602548.2	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51710511	51712131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51710500_51712100
transcript_187526.known	chrX	+	2791	1	FSM	ENSG00000189369.9	ENST00000340438.6	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTCAGGCCGTCTT	14	True	NA	NA	False	AATAAA	-36	NA	51743441	51746232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51743400_51746200
transcript_187531.known	chrX	+	2875	14	FSM	ENSG00000179222.18	ENST00000375695.2	2875	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	579.60744724288	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-1	True	NA	21	True	AATAAA	-21	NA	51893638	51902354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51893756_51894268_51894350_51894626_51894795_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_187539.known	chrX	+	2701	13	FSM	ENSG00000179222.18	ENST00000375772.7	2701	13	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	409.888695935318	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	NA	False	NA	21	True	AATAAA	-21	NA	51803006	51902354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51803118_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_187547.known	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	187.839026828825	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-17	True	NA	21	True	AATAAA	-21	NA	51893622	51902354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_18755.nic	chr1	+	1209	8	NIC	ENSG00000185842.16	novel	1984	11	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_6	63.0484102957111	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	NA	False	NA	16	True	AATAAA	-16	NA	224929622	224969829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969633
transcript_187558.known	chrX	+	2906	12	FSM	ENSG00000179222.18	ENST00000485420.5	2906	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	487.518645542984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGATGTGCTCTCTGCT	18	True	NA	19	True	AATAAA	-19	NA	51893657	51902352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51893756_51894275_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_18756.known	chr1	+	1103	7	FSM	ENSG00000185842.16	ENST00000366850.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	43.9143737541847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTCAGAAACTTTAT	-17	True	NA	8	True	AATAAA	-23	NA	224929660	224967923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
transcript_18761.known	chr1	-	3748	14	FSM	ENSG00000143815.15	ENST00000272163.9	3748	14	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	74.3348413535218	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGCCTTTTTTTTTT	22	True	NA	-6	True	AATAAA	-21	NA	225428038	225401501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_187621.known	chrX	-	2482	13	FSM	ENSG00000187243.17	ENST00000497164.5	2482	13	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_12	333.701546628454	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	0	True	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068174_52069129
transcript_187622.known	chrX	-	2578	13	FSM	ENSG00000187243.17	ENST00000335504.10	2513	13	-65	0	-29	0	multi-exon	FALSE	canonical	3	900	junction_12	203.85568152222	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069248	52061826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
transcript_187623.nic	chrX	-	2621	13	NIC	ENSG00000187243.17	novel	2618	14	NA	NA	-51	0	intron_retention	FALSE	canonical	3	222	junction_12	357.55007419319	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069270	52061826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068225_52069129
transcript_187624.nic	chrX	-	2654	13	NIC	ENSG00000187243.17	novel	2618	14	NA	NA	-45	0	intron_retention	FALSE	canonical	3	44	junction_12	402.658974816159	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069264	52061826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068264_52069129
transcript_187649.nic	chrX	-	3013	12	NIC	ENSG00000187243.17	novel	2513	13	NA	NA	-53	0	intron_retention	FALSE	canonical	3	900	junction_11	177.413137866403	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069272	52061826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068204_52069129
transcript_187650.nic	chrX	-	3000	12	NIC	ENSG00000187243.17	novel	2618	14	NA	NA	-19	0	intron_retention	FALSE	canonical	3	222	junction_11	359.829459146165	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069238	52061826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068225_52069129
transcript_187651.known	chrX	-	2995	12	FSM	ENSG00000187243.17	ENST00000470594.5	2995	12	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_11	508.101099460262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	0	True	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52062039_52062221_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068264_52069129
transcript_18766.nnic	chr1	-	3721	13	NIC	ENSG00000143815.15	novel	3748	14	NA	NA	-52	0	intron_retention	FALSE	canonical	3	62	junction_4	188.835080162559	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGCCTTTTTTTTT	683	False	NA	-7	True	AATAAA	-20	NA	225428138	225401502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_18770.nic	chr1	-	1929	8	ISM	ENSG00000143815.15	ENST00000651341.1	2695	15	-52	10278	-52	-5246	5prime_fragment	FALSE	canonical	3	673	junction_5	49.559282167719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGAAACGAGAGGTTAC	683	False	NA	NA	False	AAAACA	-15	NA	225428138	225411807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_187703.known	chrX	+	2537	13	FSM	ENSG00000154545.17	ENST00000471932.6	2537	13	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	206.832460379571	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	2	True	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185891_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_18772.known	chr1	-	3812	14	FSM	ENSG00000143815.15	ENST00000338179.6	3812	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	189.957298222335	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGCCTTTTTTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	225428855	225401502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225428705
transcript_187721.nic	chrX	+	3000	12	NIC	ENSG00000154545.17	novel	2537	13	NA	NA	-40	0	intron_retention	FALSE	canonical	3	890	junction_1	180.687484187889	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184835	52192268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_52184966_52185891_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_187724.known	chrX	+	2996	12	FSM	ENSG00000154545.17	ENST00000477634.5	2996	12	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	508.698403885546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	-2	True	NA	NA	False	ATTAAA	-14	NA	52184911	52192268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185831_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
transcript_187735.known	chrX	+	2483	13	FSM	ENSG00000154545.17	ENST00000498483.5	2483	13	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	335.41378880753	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	-2	True	NA	NA	False	ATTAAA	-14	NA	52184911	52192268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185921_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_187736.known	chrX	+	2618	14	FSM	ENSG00000154545.17	ENST00000599522.7	2618	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	567.556164621617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	11	False	NA	NA	False	ATTAAA	-14	NA	52184875	52192268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185870_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190344_52190393_52190993_52191109_52191430_52191862_52192056
transcript_187740.nnic	chrX	+	2874	4	NNC	ENSG00000179304.18	novel	2942	4	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	67.9427863884182	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	5357	False	NA	NA	False	AATAAA	-20	NA	52896957	52908560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_52898213_52899467_52899542_52900567_52900661_52907108
transcript_187742.known	chrX	+	2942	4	FSM	ENSG00000179304.18	ENST00000593751.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	47.814456205443	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	69	False	NA	NA	False	AATAAA	-16	NA	52897399	52908556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52898727_52899467_52899542_52900567_52900661_52907108
transcript_187744.known	chrX	+	1701	3	FSM	ENSG00000179304.18	ENST00000509613.1	1701	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	64	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	466	False	NA	NA	False	AATAAA	-20	NA	52899382	52908560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52899542_52900570_52900661_52907108
transcript_187745.known	chrX	-	2942	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	46.4207807871527	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	53	False	NA	NA	False	AATAAA	-16	NA	52958414	52947257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
transcript_187746.known	chrX	-	1677	4	FSM	ENSG00000268350.8	ENST00000612846.5	1677	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	66.7449540331619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	808	False	NA	NA	False	AATAAA	-20	NA	52957659	52947253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957601
transcript_187747.known	chrX	-	1733	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	56.2751178487339	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
transcript_187748.known	chrX	-	2188	4	FSM	ENSG00000268350.8	ENST00000619586.5	2188	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	71.331775683928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	1220	False	NA	NA	False	AATAAA	-20	NA	52957247	52947253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956756_52957087
transcript_187750.known	chrX	-	3791	3	FSM	ENSG00000268350.8	ENST00000622447.5	3791	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	19.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272
transcript_187752.known	chrX	+	2815	7	FSM	ENSG00000184205.14	ENST00000375442.8	2815	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	24.438130497692	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCGCTTCGAGTCTTT	0	True	NA	16	True	AATAAA	-17	NA	53082366	53088540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
transcript_187757.nic	chrX	+	1408	5	ISM	ENSG00000184205.14	ENST00000375442.8	2815	7	-65	3246	-65	-545	5prime_fragment	FALSE	canonical	3	161	junction_1	22.8309001136617	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAGCAAGAAATGA	1157	False	NA	NA	False	GATAAA	-1	NA	53082301	53085294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226
transcript_187764.known	chrX	+	4343	4	FSM	ENSG00000232593.7	ENST00000603385.2	4343	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTATTTTCTTTTTTGTA	-27	True	NA	12	True	ATTAAA	-23	NA	53094147	53170914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_53094285_53094399_53094475_53099471_53099609_53166920
transcript_18777.nnic	chr1	-	4278	15	NNC	ENSG00000154380.18	novel	13168	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_9	135.400709159208	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	225653134	225495479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514664_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_187777.nnic	chrX	-	5768	27	NNC	ENSG00000126012.13	novel	5810	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.4365653234759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	224	False	NA	-4	True	AATAAA	-25	NA	53225225	53192157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_53192841_53192891_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
transcript_18778.known	chr1	-	13168	15	FSM	ENSG00000154380.18	ENST00000366844.7	13168	15	0	0	0	0	multi-exon	TRUE	canonical	3	428	junction_9	71.6577751168279	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATGAGATTTGTATTT	-23	True	NA	-10	True	AATAAA	-17	NA	225653142	225486834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_187793.known	chrX	-	5677	26	FSM	ENSG00000126012.13	ENST00000404049.7	5677	26	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_22	36.2748177114648	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAACAAGAAACTTGGTT	273	False	NA	18	True	AAGAAA	-8	NA	53225176	53192256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53193333_53193436_53193637_53193772_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217275_53217795_53217967_53218275_53218399_53220838_53220917_53224739
transcript_187798.known	chrX	-	5245	26	FSM	ENSG00000126012.13	ENST00000375379.7	5245	26	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_13	28.0057137027429	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTCAAGGATCCTC	27	False	NA	NA	False	NA	NA	NA	53225422	53192928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
transcript_187799.nnic	chrX	-	5744	26	NNC	ENSG00000126012.13	novel	5810	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	39.4841943060764	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	221	False	NA	-4	True	AATAAA	-25	NA	53225228	53192157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195308_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
transcript_187843.nic	chrX	-	1859	4	NIC	ENSG00000124313.18	novel	922	3	NA	NA	-62	0	intron_retention	FALSE	canonical	3	4	junction_2	14.8548533034381	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	NA	False	NA	-6	True	AATAAA	-14	NA	53321412	53266327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53267065_53279563_53279660_53291894_53291925_53320416
transcript_187844.known	chrX	-	922	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	-5	True	NA	-6	True	AATAAA	-14	NA	53281584	53266327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53267065_53279563_53279660_53281495
transcript_187845.known	chrX	-	722	3	FSM	ENSG00000124313.18	ENST00000638583.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTGCCACTACTGGAGA	-2	True	NA	NA	False	NA	NA	NA	53281581	53266641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53267065_53279563_53279777_53281495
transcript_187846.nnic	chrX	-	1763	3	NIC	ENSG00000124313.18	novel	922	3	NA	NA	-62	0	intron_retention	FALSE	canonical	2	7	junction_1	14.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	NA	False	NA	-6	True	AATAAA	-14	NA	53321412	53266327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53267065_53291894_53291925_53320416
transcript_187847.known	chrX	-	835	2	FSM	ENSG00000124313.18	ENST00000485377.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGTCTGATGTATATT	27	False	NA	-7	True	AATAAA	-13	NA	53281594	53266328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53267065_53281495
transcript_187848.known	chrX	-	9710	25	FSM	ENSG00000072501.19	ENST00000322213.9	9710	25	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_22	49.9894259652312	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	13	True	NA	-4	True	AATAAA	-14	NA	53422654	53374148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_187851.nic	chrX	-	2640	16	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-54	25470	20	5180	5prime_fragment	FALSE	canonical	3	352	junction_13	43.2488407037948	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAATGAGATAGAAAA	NA	False	NA	NA	False	GATAAA	-31	NA	53422708	53399618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_187852.nic	chrX	-	2338	14	NIC	ENSG00000072501.19	novel	9930	26	NA	NA	20	5180	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	101.972208767618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAATGAGATAGAAAA	NA	False	NA	NA	False	GATAAA	-31	NA	53422708	53399618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53422491
transcript_187856.nic	chrX	-	905	5	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-54	38808	20	-962	5prime_fragment	FALSE	canonical	3	352	junction_2	18.8679622641132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGGAGCTGGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	53422708	53412956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_187859.nic	chrX	-	707	4	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-54	39099	20	-1253	5prime_fragment	FALSE	canonical	3	352	junction_1	16.1107279647928	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGGAGAAAGAAGAGGTAG	NA	False	NA	-7	True	AAGAAA	-30	NA	53422708	53413247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53413436_53414757_53414871_53414980_53415170_53422491
transcript_18786.known	chr1	-	2758	14	FSM	ENSG00000154380.18	ENST00000366843.7	13092	14	78	10256	78	-200	multi-exon	FALSE	canonical	3	112	junction_3	137.350284279706	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAGATGCCTTCCTAAA	284	False	NA	3	True	ATTAAA	-26	NA	225653045	225497084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_187860.nic	chrX	-	623	4	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-54	39183	20	-1337	5prime_fragment	FALSE	canonical	3	352	junction_1	16.1107279647928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAATGGTGAAGGCTG	NA	False	NA	0	True	NA	NA	NA	53422708	53413331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53413436_53414757_53414871_53414980_53415170_53422491
transcript_187864.known	chrX	-	916	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	306.038821066871	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	43	False	NA	-2	True	AATAAA	-20	NA	53434356	53431257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_187866.known	chrX	-	954	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_5	72.560595366907	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	-1	True	NA	-5	True	AATAAA	-17	NA	53434370	53431260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_187869.known	chrX	-	1154	5	FSM	ENSG00000072506.14	ENST00000684692.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_4	78.3848677998502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	2	True	NA	-5	True	AATAAA	-17	NA	53434367	53431260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_18787.nnic	chr1	-	1912	14	NNC	ENSG00000154380.18	novel	13168	15	NA	NA	-1	-755	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	138.560947220617	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGAAAAGAATTAACAAAG	-24	True	NA	-3	True	NA	NA	NA	225653143	225498388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514664_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_187870.known	chrX	-	823	5	FSM	ENSG00000072506.14	ENST00000375298.4	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	350.819308904171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTAGGCAGTGTTGT	-2	True	NA	-7	True	AATAAA	-15	NA	53434350	53431262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53431595_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_187879.known	chrX	-	6357	22	FSM	ENSG00000172943.21	ENST00000338154.11	6357	22	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	14.4815153113991	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	-8	True	NA	-4	True	GATAAA	-19	NA	54044473	53936679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
transcript_187880.known	chrX	-	4651	22	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	-58	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	23.5025930928093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTGCTTGGCATTC	970	False	NA	-6	True	GATAAA	-17	NA	54044174	53936681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53938060_53939161_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
transcript_187886.known	chrX	-	1140	2	FSM	ENSG00000184083.12	ENST00000477084.1	1140	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTGTGCTTGTTCTTT	282	False	NA	0	True	AATAGA	-17	NA	54183281	54173788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_54174147_54182499
transcript_187891.nnic	chrX	-	829	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-52	-122	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGGAAATGGAAGAAG	-30	True	NA	NA	False	NA	NA	NA	54358057	54333299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_54333793_54357721
transcript_187892.nnic	chrX	-	752	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-52	-122	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGGAAATGGAAGAAG	-30	True	NA	NA	False	NA	NA	NA	54358057	54333299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_54333793_54357798
transcript_187896.known	chrX	-	4343	18	FSM	ENSG00000102302.8	ENST00000375135.4	4343	18	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_16	30.3848441550267	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAGCACTGCTGTGC	-4	True	NA	-10	True	AATACA	-23	NA	54496234	54445453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_54446415_54447310_54447455_54448805_54448968_54449142_54449269_54449658_54449761_54450270_54450302_54455447_54455528_54455691_54455785_54456219_54456367_54456508_54456568_54465450_54465590_54465695_54465853_54467783_54467933_54468786_54468877_54470015_54470458_54470582_54470761_54471313_54471488_54495125
transcript_18790.nic	chr1	-	2343	14	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-195	11554	-195	-755	5prime_fragment	FALSE	canonical	3	428	junction_8	72.5398074758891	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGAAAAGAATTAACAAAG	-8	True	NA	-3	True	NA	NA	NA	225653337	225498388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_187903.known	chrX	+	4076	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_1	56.3293884220306	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	-8	True	NA	NA	False	AATAAA	-25	NA	54440403	54448032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
transcript_187918.known	chrX	+	2638	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	12.7058057595731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	-5	True	NA	-33	True	NA	NA	NA	54530182	54621521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
transcript_187921.nnic	chrX	+	2400	17	NNC	ENSG00000130119.17	novel	2357	16	NA	NA	-2	1558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.2781246322664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTCAGAATGTTGGCC	NA	False	NA	NA	False	AATACA	-44	NA	54530180	54562629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560765_54562309
transcript_187934.nnic	chrX	+	2468	17	NNC	ENSG00000130119.17	novel	8684	16	NA	NA	-8	1558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.0499944395007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTCAGAATGTTGGCC	-20	True	NA	NA	False	AATACA	-44	NA	54530229	54562629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560765_54562309
transcript_187938.known	chrX	+	2357	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	8.25590697622012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-39	True	NA	NA	False	NA	NA	NA	54530210	54561071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_187943.known	chrX	+	2317	16	FSM	ENSG00000130119.17	ENST00000674311.1	2317	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.7113092008021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTAAGGCAGGAGAATCG	10	True	NA	NA	False	NA	NA	NA	54530259	54560967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530420_54532523_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_187954.nnic	chrX	+	2030	14	NNC	ENSG00000102316.17	novel	2051	13	NA	NA	52	0	intron_retention	FALSE	canonical	0	0	junction_3	521.060332228894	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGCTTTTTTTG	65	False	NA	31	True	ATTAAA	-16	NA	54807650	54816012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54807803_54809302_54809377_54809721_54809785_54809896_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_18796.nnic	chr1	-	1885	13	NNC	ENSG00000154380.18	novel	13168	15	NA	NA	-8	-3357	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_7	132.005971034983	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCTCAGTGGCAGCTT	-12	True	NA	NA	False	NA	NA	NA	225653131	225500990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514664_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_187966.nnic	chrX	+	2019	14	NNC	ENSG00000102316.17	novel	1798	15	NA	NA	-45	0	intron_retention	FALSE	canonical	0	0	junction_3	548.433508831716	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGCTTTTTTTG	553	False	NA	31	True	ATTAAA	-16	NA	54808292	54816012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54808434_54809302_54809377_54809721_54809785_54809896_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_18798.nic	chr1	-	2134	13	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-1	14156	-1	-3357	5prime_fragment	FALSE	canonical	3	428	junction_7	56.3542860442358	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCTCAGTGGCAGCTT	-24	True	NA	NA	False	NA	NA	NA	225653143	225500990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_187989.known	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_1	244.142532936989	3013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	5	True	NA	34	True	ATTAAA	-19	NA	54807744	54816015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_188008.known	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_1	311.79373523747	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	-8	True	NA	26	True	ATTAAA	-11	NA	54808370	54816007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_188014.nic	chrX	+	2170	13	NIC	ENSG00000102316.17	novel	2026	12	NA	NA	-16	0	intron_retention	FALSE	canonical	3	133	junction_1	476.034750132103	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGCTTTTTTTG	635	False	NA	31	True	ATTAAA	-16	NA	54809043	54816012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_188016.known	chrX	+	2066	12	FSM	ENSG00000102316.17	ENST00000375053.6	2066	12	0	0	0	0	multi-exon	TRUE	canonical	3	1016	junction_1	253.52526077541	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	13	True	NA	30	True	NA	NA	NA	54807598	54815694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_188030.known	chrX	+	1958	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_1	323.843804815462	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	-7	True	NA	30	True	NA	NA	NA	54808337	54815694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_188040.known	chrX	+	2026	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	494.626296868372	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	651	False	NA	30	True	NA	NA	NA	54809059	54815694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_18807.nic	chr1	-	2064	12	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-11	18156	-11	-7357	5prime_fragment	FALSE	canonical	3	428	junction_6	58.8533687078698	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATCCTGCTGTGACGT	-34	True	NA	NA	False	NA	NA	NA	225653153	225504990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_188098.known	chrX	+	2177	13	FSM	ENSG00000102316.17	ENST00000347546.8	2177	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	538.247826026471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	7	True	NA	26	True	ATTAAA	-11	NA	54807746	54816007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54809818_54809871_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_1881.known	chr1	-	2816	6	FSM	ENSG00000227372.12	ENST00000648432.1	2816	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	71.2780471112951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTTTAGTTTTATAA	423	False	NA	-53	True	NA	NA	NA	3746942	3735649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3736559_3736925_3737104_3740232_3740388_3742803_3742912_3743060_3743191_3745606
transcript_188103.known	chrX	+	2597	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	128.650896827181	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	253	False	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_188112.known	chrX	+	1403	14	NNC	ENSG00000067445.22	novel	1404	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	196.336506204626	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	253	False	NA	NA	False	ATTAAA	-12	NA	54920815	54931429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928669_54928669_54928711_54930740_54931032_54931203
transcript_188116.known	chrX	+	2306	13	FSM	ENSG00000067445.22	ENST00000375022.8	2306	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	129.540292959372	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	253	False	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_188117.known	chrX	+	4634	13	FSM	ENSG00000067445.22	ENST00000173898.12	4634	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	103.96620711665	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	0	True	NA	NA	False	ATTAAA	-14	NA	54920823	54931431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
transcript_188120.nic	chrX	+	3032	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_11	133.886845881139	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	233	False	NA	NA	False	ATTAAA	-12	NA	54920795	54931429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_188134.nic	chrX	+	4815	12	ISM	ENSG00000067445.22	ENST00000375022.8	2306	13	-20	4	0	-2	intron_retention	FALSE	canonical	3	393	junction_1	34.1210775604215	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGGAGTTTTTTCTGT	233	False	NA	NA	False	ATTAAA	-10	NA	54920795	54931427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602
transcript_188135.nic	chrX	+	2743	12	NIC	ENSG00000067445.22	novel	2306	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	135.298567913111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	233	False	NA	NA	False	ATTAAA	-14	NA	54920795	54931431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54927106_54927666_54927782_54928602_54928711_54931203
transcript_18816.nic	chr1	-	939	5	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	6	32672	6	-89	5prime_fragment	FALSE	canonical	3	479	junction_1	63.5152540733326	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAAAGAGAAAGGTTG	-17	True	NA	-1	True	NA	NA	NA	225653136	225519506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_188163.known	chrX	-	1940	11	FSM	ENSG00000158578.21	ENST00000650242.1	1940	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.20415945787923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGCCTTTTATTGGAC	-1	True	NA	0	True	AATAAA	-16	NA	55030977	55009054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55009344_55013485_55013649_55014746_55015016_55015577_55015743_55017485_55017666_55020319_55020505_55021051_55021275_55023756_55023868_55024717_55024841_55025819_55026016_55030941
transcript_188164.known	chrX	-	1795	10	FSM	ENSG00000158578.21	ENST00000335854.8	1795	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.33333333333333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGAGCCTAAAAATAAAG	-1	True	NA	-34	True	NA	NA	NA	55030977	55009088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55009344_55013485_55013649_55014746_55015016_55015577_55015743_55017485_55017666_55020319_55020505_55021051_55021275_55024717_55024841_55025819_55026016_55030941
transcript_188165.known	chrX	+	3239	6	FSM	ENSG00000169188.5	ENST00000374987.4	3239	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	12.9861464645983	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGCTTTATTTT	-2	True	NA	3	True	AATAAA	-14	NA	55000362	55009057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55000580_55001545_55001630_55002250_55002432_55002961_55003109_55003798_55003869_55006517
transcript_188166.known	chrX	+	728	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	82.965354214877	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGCCTGAGGTGAT	28	True	NA	NA	False	NA	NA	NA	55000392	55006757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
transcript_188169.known	chrX	-	1179	4	FSM	ENSG00000182518.14	ENST00000358460.8	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	115.345856738188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	NA	False	NA	-5	True	AATAAA	-22	NA	55161310	55143101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55143876_55146180_55146312_55159128_55159229_55161136
transcript_188171.known	chrX	-	1109	3	FSM	ENSG00000182518.14	ENST00000472571.2	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	108	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGCACAATTCTGTC	-6	True	NA	NA	False	NA	NA	NA	55161182	55145355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55146312_55159121_55159229_55161136
transcript_188172.known	chrX	-	1170	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGTGCACTTCA	5	True	NA	NA	False	NA	NA	NA	55161119	55145386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55146312_55159128_55159229_55160974
transcript_188173.nic	chrX	-	873	3	FSM	ENSG00000182518.14	ENST00000685693.1	3359	3	-350	2836	-225	0	multi-exon	FALSE	canonical	3	272	junction_2	5.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	NA	False	NA	-66	True	NA	NA	NA	55161535	55145937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55146312_55159128_55159229_55161136
transcript_188176.known	chrX	-	712	3	FSM	ENSG00000182518.14	ENST00000489298.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	22	True	NA	-66	True	NA	NA	NA	55161102	55145937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55146312_55159128_55159229_55160864
transcript_188177.known	chrX	+	1440	1	FSM	ENSG00000187601.5	ENST00000342972.3	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCGCATTTTCTGAC	-25	True	NA	22	True	AATAAA	-17	NA	55452126	55453566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55452100_55453600
transcript_188178.known	chrX	+	1573	11	FSM	ENSG00000083750.13	ENST00000262850.7	1573	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	26.528475267154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATATTGTTTCACACA	82	False	NA	NA	False	NA	NA	NA	55717884	55758348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_18818.nic	chr1	-	886	4	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-23	43742	-23	-11159	5prime_fragment	FALSE	canonical	3	524	junction_1	55.8808255725223	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAATTGGAAATTCAAAG	164	False	NA	-16	True	NA	NA	NA	225653165	225530576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225530639_225554905_225555084_225567248_225567415_225652685
transcript_188181.known	chrX	+	2051	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.1695836178605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	-13	True	NA	NA	False	AATAAA	-17	NA	55717748	55758774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_188182.nic	chrX	+	2106	2	ISM	ENSG00000083750.13	ENST00000262850.7	1573	11	-181	37645	-45	-11005	5prime_fragment	FALSE	canonical	3	76	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCGGACATGATGGTGCA	NA	False	NA	NA	False	AATATA	-19	NA	55717703	55720703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_55718420_55719313
transcript_188187.known	chrX	+	956	3	FSM	ENSG00000227486.3	ENST00000669152.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	NA	False	NA	NA	False	NA	NA	NA	55908242	56205253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55908801_56014844_56014962_56204972
transcript_188189.known	chrX	+	7897	3	FSM	ENSG00000227486.3	ENST00000658575.1	7897	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAGAGAATAGAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	55908231	56021946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55908801_55985998_55986225_56014844
transcript_18819.known	chr1	+	856	5	FSM	ENSG00000143742.14	ENST00000651465.1	856	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	2881.11237198413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTCTCTGGCAAATTT	12	True	NA	NA	False	AAAACA	-5	NA	225777845	225789627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789033_225789142_225789239
transcript_188193.nnic	chrX	+	1963	7	NNC	ENSG00000102349.18	novel	1908	7	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	19.7603699920377	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	-6	True	NA	29	True	AATAAA	-23	NA	56232385	56285097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_56232489_56233157_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_188194.known	chrX	+	1908	7	FSM	ENSG00000102349.18	ENST00000358094.7	1908	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.0282965678168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	298	False	NA	29	True	AATAAA	-23	NA	56233188	56285097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56268912_56268992_56269377_56269490_56270181_56270322_56284312
transcript_188195.known	chrX	+	9096	6	FSM	ENSG00000102349.18	ENST00000468660.6	9096	6	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	13.9226434271657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCATTTTCTTGACT	2	True	NA	19	True	AATAAA	-21	NA	56232355	56291531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_188197.nic	chrX	+	2895	3	ISM	ENSG00000102349.18	ENST00000358094.7	1908	7	-799	18049	-31	-2160	5prime_fragment	FALSE	canonical	3	32	junction_1	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTGACAGTTTAT	-2	True	NA	NA	False	AATAAA	-2	NA	56232389	56267048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_56233342_56250230_56250305_56265179
transcript_188198.known	chrX	+	4950	2	FSM	ENSG00000102349.18	ENST00000476898.1	4950	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATTCTCTTCCTTCCA	-10	True	NA	NA	False	AATAAA	-1	NA	56232420	56269208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56233342_56265179
transcript_188199.known	chrX	+	4242	1	FSM	ENSG00000188021.9	ENST00000338222.7	4242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTTGTTTCTCATT	22	True	NA	3	True	AATAAA	-14	NA	56563626	56567868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56563600_56567900
transcript_18820.known	chr1	+	1596	4	FSM	ENSG00000143742.14	ENST00000366839.8	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	2961.36364985232	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTGTTGAAGTTT	3	True	NA	14	True	AATAAA	-18	NA	225777836	225790466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789239
transcript_188200.known	chrX	+	713	2	FSM	ENSG00000230105.1	ENST00000446028.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTCATGGACAGGAAGAA	1	True	NA	NA	False	AAGAAA	-15	NA	56618390	56624458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56618514_56623868
transcript_188204.known	chrX	-	3221	6	FSM	ENSG00000204271.13	ENST00000638873.1	3221	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	26.8730348118704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-26	True	NA	NA	NA	56995730	56975141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978291_56978422_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_188205.known	chrX	-	2998	6	FSM	ENSG00000204271.13	ENST00000639956.1	2998	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24.8306262506607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	2	True	NA	-26	True	NA	NA	NA	56995533	56975141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978291_56978422_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_188206.known	chrX	-	3121	6	FSM	ENSG00000204271.13	ENST00000638819.1	3121	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	28.0042853863476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	-18	True	NA	-26	True	NA	NA	NA	56995553	56975141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978291_56978499_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_188208.known	chrX	-	2938	5	FSM	ENSG00000204271.13	ENST00000640131.1	2938	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	7.03562363973514	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	-20	True	NA	-4	True	AATAAA	-15	NA	56995555	56975119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_188209.known	chrX	-	1620	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.356157588604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCTCTAACAGTGTGA	10	True	NA	-13	True	AATAAA	-20	NA	56995525	56976381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_18821.known	chr1	+	540	4	FSM	ENSG00000143742.14	ENST00000366838.1	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3210.75653943982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTTTTCAGTTAGAAA	101	False	NA	NA	False	NA	NA	NA	225777934	225789524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225789033_225789142_225789239
transcript_188210.known	chrX	-	2543	5	FSM	ENSG00000204271.13	ENST00000640187.1	2543	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	19.422924599555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGACATCGCATTTT	28	False	NA	NA	False	NA	NA	NA	56995507	56975401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_188211.known	chrX	-	1722	3	FSM	ENSG00000204271.13	ENST00000640768.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTATGTGTGTATCAG	109	False	NA	NA	False	NA	NA	NA	56995426	56990953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56992238_56994722_56994950_56995215
transcript_188212.known	chrX	-	2245	3	FSM	ENSG00000204271.13	ENST00000639583.1	2245	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATACTATACATGCTGTT	-20	True	NA	-75	True	NA	NA	NA	56995555	56990905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56992584_56994722_56994950_56995215
transcript_188214.known	chrX	-	4445	2	FSM	ENSG00000204271.13	ENST00000374919.6	4445	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCCTGTGTATATTT	-6	True	NA	0	True	ATTAAA	-20	NA	56995541	56990830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56994950_56995215
transcript_188215.known	chrX	-	4461	2	FSM	ENSG00000204271.13	ENST00000638386.1	4461	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTCTGAATTTTGC	NA	False	NA	-64	True	NA	NA	NA	56995647	56990894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56994950_56995241
transcript_188216.known	chrX	-	4299	4	FSM	ENSG00000204271.13	ENST00000639888.1	4299	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	-20	True	NA	-26	True	NA	NA	NA	56995555	56975141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995215
transcript_188219.known	chrX	+	896	4	FSM	ENSG00000204272.13	ENST00000637096.1	896	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	502.329462493381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTGTGTTAGATCTAT	-29	True	NA	17	True	AATAAA	-11	NA	56729240	56817569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56729590_56732062_56732200_56811019_56811180_56817319
transcript_18822.known	chr1	+	548	3	FSM	ENSG00000143742.14	ENST00000650651.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTAGTCCCAGCTACT	-4	True	NA	NA	False	AATAGA	-26	NA	225777829	225788266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225787970
transcript_188220.known	chrX	+	2344	3	FSM	ENSG00000204272.13	ENST00000374922.9	2344	3	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_2	31	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGATAAACTGG	-27	True	NA	NA	False	AATAAA	-1	NA	56729242	56819179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56729590_56732062_56732200_56817319
transcript_188221.known	chrX	+	543	2	FSM	ENSG00000204272.13	ENST00000423617.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATAAGAACTCCTATG	84	False	NA	9	True	AGTAAA	-20	NA	56729353	56817626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56729590_56817319
transcript_18823.known	chr1	+	1420	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	3368	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGTTGAAGTTTTT	38	False	NA	16	True	AATAAA	-20	NA	225777871	225790468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225789258
transcript_188230.known	chrX	-	725	3	FSM	ENSG00000186787.10	ENST00000374910.3	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	201	False	NA	-3	True	AATACA	-18	NA	57121315	57119681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57120102_57120404_57120632_57121237
transcript_188232.known	chrX	-	1258	2	FSM	ENSG00000186787.10	ENST00000333933.3	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	-30	True	NA	-4	True	AATACA	-17	NA	57121546	57119682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57120632_57121237
transcript_188233.known	chrX	-	1152	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	25	True	NA	-3	True	AATACA	-18	NA	57121491	57119681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57120635_57121292
transcript_188234.nnic	chrX	-	1428	2	NNC	ENSG00000186787.10	novel	1152	2	NA	NA	-10	-2	intron_retention	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGCTGTGTGTAAGCC	-42	True	NA	-6	True	AATACA	-15	NA	57121558	57119684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_57120635_57121080
transcript_188235.known	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	-12	True	AATACA	-18	NA	57137625	57135649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57136603_57137259
transcript_188237.known	chrX	+	1980	11	FSM	ENSG00000165591.7	ENST00000374900.5	1980	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	4.86312656631513	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	9	True	NA	9	True	AATAAA	-16	NA	57286705	57489193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
transcript_188241.known	chrX	+	5467	1	FSM	ENSG00000198455.5	ENST00000374888.3	5467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCTGTGACTTCATT	34	False	NA	9	True	AATAAA	-20	NA	57592010	57597477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_57592000_57597500
transcript_188243.known	chrX	-	653	5	FSM	ENSG00000235437.9	ENST00000671338.1	653	5	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_3	20.3638773321782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACTAAAGTAAGAAATAA	109	False	NA	NA	False	NA	NA	NA	63560942	63426891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63426997_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_188245.known	chrX	-	980	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	5.73488351136175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-20	True	NA	-1	True	AATAAA	-17	NA	63561071	63426557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
transcript_188246.known	chrX	-	2919	4	FSM	ENSG00000235437.9	ENST00000671033.1	2919	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	33.0386978489703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTGAGCTGCTTCTGT	-20	True	NA	-10	True	AATAAA	-8	NA	63561071	63426566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63428982_63432363_63432492_63509943_63510080_63560831
transcript_188247.known	chrX	-	2973	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	12.684198393627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTCTGTTCCGTTCT	-29	True	NA	-2	True	AATAAA	-16	NA	63561080	63426558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
transcript_188249.known	chrX	-	816	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-29	True	NA	-1	True	AATAAA	-17	NA	63561080	63426557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63426997_63432363_63432492_63560831
transcript_188250.known	chrX	-	2814	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	0	2	0	0	multi-exon	FALSE	canonical	3	50	junction_2	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTTCTGTTCCGTTC	NA	False	NA	-3	True	AATAAA	-15	NA	63561095	63426559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63428982_63432363_63432492_63560831
transcript_188252.known	chrX	-	4105	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTATCTTTGTATT	-9	True	NA	-9	True	AATAAA	-20	NA	63351332	63347227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63347200_63351300
transcript_188254.known	chrX	-	1920	10	FSM	ENSG00000131089.17	ENST00000636392.1	1920	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	51.1825587577219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACAGGGAGGCAGATAA	7	True	NA	-72	True	NA	NA	NA	63754684	63638026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754307
transcript_188255.known	chrX	-	1888	10	FSM	ENSG00000131089.17	ENST00000624210.3	1888	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	49.4573016991225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAAAAGTGTTTTCT	17	True	NA	NA	False	NA	NA	NA	63755078	63637839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754920
transcript_188256.known	chrX	-	4702	10	FSM	ENSG00000131089.17	ENST00000671741.2	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	25.2004311152619	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	-27	True	NA	-1	True	AATAAA	-16	NA	63785214	63634966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_188257.known	chrX	-	2154	9	FSM	ENSG00000131089.17	ENST00000624843.3	2154	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	54.5435605731786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTATAGATGGACCT	32	True	NA	-30	True	AATAAA	-11	NA	63755063	63637984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63754314
transcript_188258.known	chrX	-	2143	9	FSM	ENSG00000131089.17	ENST00000623517.3	2143	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	47.3286382647969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCATTGCTTTTCTTG	-16	True	NA	NA	False	NA	NA	NA	63785558	63637689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63785115
transcript_188259.known	chrX	-	4886	9	FSM	ENSG00000131089.17	ENST00000672513.1	4886	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	61.2367332570901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATGGAGTTCAATAA	436	False	NA	-37	True	NA	NA	NA	63754765	63635002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
transcript_188274.known	chrX	-	2724	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	37.1306813834597	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAAAATATTAGCACTT	-8	True	NA	4	True	AATAAA	-35	NA	64976450	64915806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
transcript_188275.known	chrX	-	606	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	70.6275442019613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAAGAGTCGGTCCCG	61	False	NA	-42	True	NA	NA	NA	65034669	64917839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
transcript_188276.known	chrX	-	2363	5	FSM	ENSG00000126970.16	ENST00000337990.2	2363	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	82.5121203218048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTGGGTAGCTCTTG	17	True	NA	-12	True	AATACA	-19	NA	65034713	64916381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_65034628
transcript_188284.known	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	217.568951187227	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	-21	True	NA	-1	True	AATAAA	-13	NA	65534787	65512581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_188290.known	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_5	75.8423071613434	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	12	True	NA	-1	True	AATAAA	-13	NA	65534754	65512581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_188296.known	chrX	-	2261	12	FSM	ENSG00000001497.18	ENST00000374804.9	2261	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	220.125283636087	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGTGTTTGTGAGAT	10	True	NA	-2	True	AATAAA	-12	NA	65534756	65512582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65534479
transcript_188302.known	chrX	-	2324	12	FSM	ENSG00000001497.18	ENST00000678823.1	2324	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	299.848088259802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAACACAGAACTTGGC	-32	True	NA	NA	False	NA	NA	NA	65534798	65520494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_188308.known	chrX	-	2301	11	FSM	ENSG00000001497.18	ENST00000676986.1	2301	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	240.481371419908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCCCAGAGAAAAAATAAAA	-32	True	NA	NA	False	NA	NA	NA	65534798	65520466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_188314.known	chrX	+	3960	13	FSM	ENSG00000147065.17	ENST00000360270.7	3960	13	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_6	68.1229994609424	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCAATCGTTCTTT	0	True	NA	24	True	AATAAA	-17	NA	65667653	65741931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_65667854_65716817_65716902_65727813_65727910_65729437_65729713_65731106_65731191_65731837_65731985_65733183_65733281_65735266_65735431_65736794_65736926_65737177_65737339_65738524_65738618_65738969_65739195_65739728
transcript_18832.known	chr1	-	4109	25	FSM	ENSG00000196187.12	ENST00000366835.8	4109	25	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_17	40.5388830836108	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	6765	False	225882397	-12	True	AGTAAA	-17	NA	225882380	225845535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
transcript_188324.known	chrX	+	4310	21	FSM	ENSG00000089472.18	ENST00000441993.7	4310	21	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_20	44.6470603735565	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGACTGAATTTGGTG	-6	True	NA	21	True	ATTAAA	-16	NA	66164358	66267383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266442
transcript_188327.nnic	chrX	+	4516	21	NNC	ENSG00000089472.18	novel	4431	21	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	51.704061735999	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	11	False	NA	27	True	ATTAAA	-22	NA	66164186	66267389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_66164471_66170532_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_188331.known	chrX	+	4067	20	FSM	ENSG00000089472.18	ENST00000425114.2	4067	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	54.9295191819692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGAACACTGAAAGACTG	18	True	NA	12	True	ATTAAA	-7	NA	66164382	66267374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_188333.nnic	chrX	+	4128	19	NIC	ENSG00000089472.18	novel	4431	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_15	49.3133092494897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	-17	True	NA	27	True	ATTAAA	-22	NA	66164216	66267389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_188336.known	chrX	+	4228	20	FSM	ENSG00000089472.18	ENST00000336279.9	4228	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.1040818251698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGAATTTGGTGATT	33	False	NA	24	True	ATTAAA	-19	NA	66164266	66267386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_66164471_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_188339.known	chrX	-	3455	7	FSM	ENSG00000131080.15	ENST00000374719.8	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.4457515435365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	-4	True	NA	-16	True	AATAAA	-19	NA	66639078	66595636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
transcript_188340.known	chrX	-	3464	7	FSM	ENSG00000131080.15	ENST00000451436.6	3464	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.51168871558685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCTTGTTTATTCCTC	-15	True	NA	-21	True	AATAAA	-14	NA	66639298	66595641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66639200
transcript_188344.known	chrX	+	10667	8	FSM	ENSG00000169083.18	ENST00000374690.9	10667	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.89968330431206	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATGTCATCAGAGTTC	-14	True	NA	12	True	CATAAA	-17	NA	67544020	67730619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_67546763_67643255_67643408_67686009_67686127_67711401_67711690_67717477_67717623_67721832_67721964_67722826_67722985_67723685
transcript_188347.known	chrX	-	3296	9	FSM	ENSG00000079482.14	ENST00000679914.1	3296	9	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1.86664806538351	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAGAAAGAAAG	-34	True	NA	NA	False	AAGAAA	-44	NA	68433522	68208047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_68210283_68212107_68212213_68213861_68213973_68234486_68234589_68274737_68274810_68283055_68283118_68299000_68299097_68432866_68433025_68433167
transcript_188350.known	chrX	+	6010	7	FSM	ENSG00000181704.12	ENST00000462683.6	6010	7	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_6	25.660713595343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTGTGTGCCTATTC	8	True	NA	18	True	ATTAAA	-26	NA	68499050	68537282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68499124_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_188353.known	chrX	+	734	7	FSM	ENSG00000181704.12	ENST00000374643.7	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	111.660198817663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTCTCACCTTTACT	6	True	NA	-45	True	NA	NA	NA	68499048	68531970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68499158_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_188354.known	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	117.114644686307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	NA	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_188357.nnic	chrX	+	4842	14	NNC	ENSG00000130052.14	novel	4820	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	4.1252577470129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAACTGTGTGGCTGTCT	2	True	NA	8	True	AATAAA	-18	NA	68693643	68725836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_68693827_68712913_68712986_68715293_68715376_68716367_68716432_68717199_68718630_68719224_68719399_68720263_68720424_68720923_68721123_68721535_68721747_68722046_68722162_68722421_68722647_68723625_68723844_68723944_68724122_68724304
transcript_188358.known	chrX	+	4820	14	FSM	ENSG00000130052.14	ENST00000374597.3	4820	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	3.02455434635962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTAACTGTGTGGCTG	9	True	NA	5	True	AATAAA	-15	NA	68693650	68725833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68693827_68712913_68712986_68715293_68715376_68716367_68716432_68717211_68718630_68719224_68719399_68720263_68720424_68720923_68721123_68721535_68721747_68722046_68722162_68722421_68722647_68723625_68723844_68723944_68724122_68724304
transcript_188362.known	chrX	+	3303	5	FSM	ENSG00000090776.6	ENST00000204961.5	3303	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	9.36416040016402	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGTGTAAAATGGTG	16	True	NA	81	True	ACTAAA	-23	NA	68829020	68842160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68829905_68838616_68838895_68839663_68839757_68839959_68840089_68840241
transcript_188364.known	chrX	-	887	2	FSM	ENSG00000181191.12	ENST00000477231.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGAGGGAGAGGCGAG	20	True	NA	NA	False	NA	NA	NA	69165449	69162325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_69163135_69165371
transcript_188365.known	chrX	-	2362	2	FSM	ENSG00000181191.12	ENST00000374571.5	2362	2	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTATAATGGAATTTTT	16	True	NA	-18	True	ATTAAA	-19	NA	69165453	69160860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_69163141_69165371
transcript_188366.known	chrX	-	574	2	FSM	ENSG00000181191.12	ENST00000590146.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAGATGATAAGCTGT	18	True	NA	NA	False	GGGGCT	-42	NA	69165451	69162804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_69163299_69165371
transcript_188367.known	chrX	-	2755	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATAATGGAATTTT	-3	True	NA	-19	True	ATTAAA	-18	NA	69165521	69160861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_69163467_69165371
transcript_188368.known	chrX	+	4643	7	FSM	ENSG00000158813.18	ENST00000616899.1	4643	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	6.0667582410671	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGCGTGAGTACTTCC	NA	False	NA	28	True	AATAAA	-23	NA	69957023	70039469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033397_70033529_70035357
transcript_188370.known	chrX	+	1682	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	110.561697205175	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	-16	True	NA	30	True	AATAAA	-33	NA	70133446	70166324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_188371.known	chrX	+	1862	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	10.2683981223947	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	-14	True	NA	30	True	AATAAA	-33	NA	70133448	70166324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_188372.known	chrX	+	4388	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	26.2412948528756	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	5	True	NA	9	True	AATAAA	-21	NA	70290103	70420886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
transcript_188381.nic	chrX	+	1895	16	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-109	46692	-109	-46692	5prime_fragment	FALSE	canonical	3	171	junction_12	21.5505607042292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAAGAATTGGTTC	7856	False	NA	NA	False	CATAAA	-34	NA	70289994	70374194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150
transcript_188385.nic	chrX	+	781	6	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-37	118827	-37	4871	5prime_fragment	FALSE	canonical	3	196	junction_1	21.3541565040626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAAGTAAGTTACAATT	27	False	NA	NA	False	AAGAAA	-6	NA	70290066	70302059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899
transcript_188388.known	chrX	+	671	4	FSM	ENSG00000090889.12	ENST00000485406.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	109.985857676744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAATTTATGTTTAAT	13	True	NA	NA	False	GATAAA	-43	NA	70290111	70297188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70290336_70290437_70290579_70290690_70290806_70296997
transcript_188389.known	chrX	-	784	8	FSM	ENSG00000120509.11	ENST00000374454.1	784	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	140.820771890792	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGAGGATGATGATA	-25	True	NA	NA	False	NA	NA	NA	70289945	70286891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289594_70289859
transcript_188391.known	chrX	-	991	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	0	0	0	multi-exon	TRUE	canonical	3	286	junction_6	39.9781190152813	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	-7	True	NA	-23	True	AGTAAA	-18	NA	70289927	70286594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
transcript_188392.nic	chrX	-	1245	7	NIC	ENSG00000120509.11	novel	991	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	65	junction_6	115.560469980968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	-22	True	NA	-23	True	AGTAAA	-18	NA	70289942	70286594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289594_70289859
transcript_188393.known	chrX	+	2438	17	FSM	ENSG00000130055.14	ENST00000453994.6	2438	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	50.4565097385858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70430973_70431127_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_188396.known	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	23.5509848815052	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	-5	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_188401.known	chrX	+	2171	15	FSM	ENSG00000130055.14	ENST00000536730.5	2171	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	38.2115486336211	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_188409.known	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	36.4383243205549	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_188412.nnic	chrX	+	1897	13	NIC	ENSG00000130055.14	novel	2067	14	NA	NA	66	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	38.8182195195332	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTCTCAGACTTGTGT	75	False	NA	31	True	AGTAAA	-16	NA	70423096	70433380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_70423383_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_188421.known	chrX	+	5074	14	FSM	ENSG00000082458.12	ENST00000374355.7	5074	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	59.294072066679	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCAGCTTTGTCTTA	-15	True	NA	9	True	AATAAA	-21	NA	70452304	70505487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70452756_70453636_70453794_70454213_70454317_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_188423.known	chrX	+	4529	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	27.9754910443687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	-3	True	NA	7	True	AATAAA	-19	NA	70455095	70505485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_188430.known	chrX	-	2235	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_11	123.477103307951	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTGTGTCCTGT	NA	False	NA	-33	True	ATTAAA	-10	NA	70931125	70925587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
transcript_188431.known	chrX	-	2239	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_11	108.585419778301	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTTTTTTGCTT	-1	True	NA	-24	True	AATAAA	-1	NA	70931096	70925578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
transcript_188448.known	chrX	+	330	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-54	True	NA	NA	NA	70962963	70963293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70963000_70963300
transcript_188449.known	chrX	-	720	4	FSM	ENSG00000147164.12	ENST00000276105.3	720	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.33999733546454	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGTGGGCACTCTGC	9	True	NA	84	True	NA	NA	NA	71068403	71060869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068153
transcript_188453.known	chrX	+	3644	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	10.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	2	True	NA	30	True	AATAAA	-30	NA	71095850	71103532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71096982_71100683_71101741_71102076
transcript_188454.nic	chrX	+	2721	3	NIC	ENSG00000184481.17	novel	306	2	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	35.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	1543	False	NA	30	True	AATAAA	-30	NA	71099245	71103532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_71099454_71100683_71101741_71102076
transcript_188458.known	chrX	+	6925	45	FSM	ENSG00000184634.17	ENST00000374080.8	6925	45	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_39	30.1613087490338	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	-17	True	NA	24	True	AATACA	-18	NA	71118595	71142450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
transcript_188462.known	chrX	+	3975	8	FSM	ENSG00000196338.15	ENST00000358741.4	3975	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	32.3633705769662	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	-4	True	NA	12	True	AATAAA	-22	NA	71144840	71171201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71144965_71147549_71148207_71148845_71148906_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_188465.known	chrX	+	3913	7	FSM	ENSG00000196338.15	ENST00000374051.7	3913	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.2916277258227	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	-2	True	NA	12	True	AATAAA	-22	NA	71144842	71171201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71144965_71147549_71148207_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_188472.known	chrX	+	3863	6	FSM	ENSG00000196338.15	ENST00000536169.6	3812	6	-12	-39	-10	0	multi-exon	FALSE	canonical	2	5	junction_2	40.0829140657213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTCCCTTGCACAG	-14	True	NA	10	True	AATAAA	-20	NA	71144830	71171199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71144965_71147549_71148207_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_188476.nic	chrX	+	3334	2	FSM	ENSG00000196338.15	ENST00000692800.1	3270	2	5	-69	5	69	multi-exon	FALSE	canonical	3	111	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGGAGAGATGGCATT	-19	True	NA	NA	False	AAAAAG	-22	NA	71144825	71150744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71144965_71147549
transcript_188478.known	chrX	+	1603	2	FSM	ENSG00000169562.13	ENST00000647424.1	1603	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCAAGTTCTTTCTC	NA	False	NA	NA	False	ATTAAA	-35	NA	71215211	71225215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71215291_71223691
transcript_188480.known	chrX	-	5536	25	FSM	ENSG00000147130.14	ENST00000314425.9	5536	25	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_11	35.7505827458332	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTTCTGGGTGAT	13	True	NA	-7	True	AATAAA	-15	NA	71254140	71239623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
transcript_188484.known	chrX	-	6067	25	FSM	ENSG00000147130.14	ENST00000373998.5	6067	25	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_24	48.6235361104979	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTTCTGGGTGAT	131	False	NA	-7	True	AATAAA	-15	NA	71255146	71239623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246630_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254467
transcript_188494.known	chrX	+	2868	13	FSM	ENSG00000147140.17	ENST00000677446.1	2868	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	722.764268278392	4079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	17	False	NA	32	True	ATTAAA	-21	NA	71254813	71301168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71255001_71283614_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_188496.known	chrX	+	1710	12	FSM	ENSG00000147140.17	ENST00000450092.6	1710	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	756.820666116589	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	71	False	NA	NA	False	NA	NA	NA	71283760	71300076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283989_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_188497.known	chrX	+	1520	12	FSM	ENSG00000147140.17	ENST00000454976.2	1520	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	757.095330089266	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	205	False	NA	NA	False	NA	NA	NA	71284193	71300076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71284232_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_188501.known	chrX	+	2606	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_1	640.065496648585	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	0	True	NA	32	True	ATTAAA	-21	NA	71283632	71301168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_188527.nic	chrX	-	2161	7	ISM	ENSG00000147130.14	ENST00000314425.9	5536	25	-303	9580	96	0	5prime_fragment	FALSE	canonical	3	122	junction_1	18.1536650722535	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	834	False	NA	-3	True	AATAAA	-15	NA	71254443	71249203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
transcript_188528.known	chrX	-	1841	7	FSM	ENSG00000147130.14	ENST00000373981.5	1841	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	47.9826357480843	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	702	False	NA	-3	True	AATAAA	-15	NA	71254575	71249203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
transcript_188529.nnic	chrX	-	1812	7	NNC	ENSG00000147130.14	novel	1841	7	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_6	38.4433204716878	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	553	False	NA	-3	True	AATAAA	-15	NA	71254724	71249203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254658
transcript_188538.known	chrX	-	1867	7	FSM	ENSG00000147130.14	ENST00000373982.5	1867	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	55.9871016891887	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	13	True	NA	0	True	AATAAA	-18	NA	71254140	71249200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251251_71251557_71251602_71252588_71253275_71254028
transcript_188539.known	chrX	+	3206	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	0	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	254.547146909959	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	-23	True	NA	22	True	ATTAAA	-11	NA	71283609	71301158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
transcript_188540.known	chrX	+	2812	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	911.735615917977	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	373	False	NA	24	True	ATTAAA	-13	NA	71283589	71301160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_188541.known	chrX	+	3596	10	FSM	ENSG00000147140.17	ENST00000678323.1	3596	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	810.923616076823	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	-23	True	NA	22	True	ATTAAA	-11	NA	71283609	71301158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297360_71298509_71298706_71298817_71299941
transcript_188542.known	chrX	+	3669	11	FSM	ENSG00000147140.17	ENST00000677218.1	3669	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	982.722549858301	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	2	True	NA	22	True	ATTAAA	-11	NA	71283634	71301158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71298509_71298706_71298817_71299941
transcript_188543.known	chrX	+	2768	13	FSM	ENSG00000147140.17	ENST00000678830.1	2768	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	957.722979548656	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	-23	True	NA	24	True	ATTAAA	-13	NA	71283609	71301160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297587_71297678_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_188544.known	chrX	+	2483	12	FSM	ENSG00000147140.17	ENST00000677879.1	2483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	757.892510750198	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	-8	True	NA	24	True	ATTAAA	-13	NA	71283624	71301160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294349_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_188547.known	chrX	+	7599	38	FSM	ENSG00000147133.17	ENST00000423759.6	7599	38	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	10.7888967083792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAGTGTGGAGAATGGT	27	True	NA	21	True	AATAAA	-18	NA	71366356	71466005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459551_71459709_71460625_71460804_71463823
transcript_188548.known	chrX	+	6221	40	FSM	ENSG00000147133.17	ENST00000683202.1	6221	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_35	15.481362466735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATATGTCAGAAATGATAA	76	False	NA	NA	False	NA	NA	NA	71366221	71464924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458358_71459149_71459252_71459551_71459709_71460625_71460804_71463823_71463889_71464413
transcript_188551.known	chrX	+	5435	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	60.8444356656706	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	-2	True	NA	19	True	AATAAA	-19	NA	71533103	71575892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_188556.known	chrX	+	3310	22	FSM	ENSG00000147162.14	ENST00000373701.7	3310	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	79.9932253367324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTATACCTGAGCCTCA	17	False	NA	6	True	AATAAA	-18	NA	71533122	71573816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_188557.known	chrX	-	532	5	FSM	ENSG00000215115.7	ENST00000452468.1	532	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGGTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	71716387	71714370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71714545_71714650_71714693_71715246_71715293_71715574_71715652_71716194
transcript_188558.known	chrX	+	1795	6	FSM	ENSG00000215113.7	ENST00000542739.3	1795	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.01980390271856	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGGTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	71763348	71767204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71764648_71765223_71765381_71765923_71766001_71766282_71766329_71766882_71766925_71767030
transcript_188561.known	chrX	-	4339	2	FSM	ENSG00000242732.4	ENST00000479991.1	4339	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCCTCTTTGTTATT	162	False	NA	-1	True	AATAAA	-20	NA	72131901	72127109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72127711_72128163
transcript_188562.known	chrX	+	1239	4	FSM	ENSG00000102309.15	ENST00000373669.8	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_1	148.236297849076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTGATTCTTAACAGA	7	True	NA	NA	False	AATAAA	-15	NA	72181756	72198340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
transcript_188563.nnic	chrX	+	501	3	NIC	ENSG00000102309.15	novel	1323	4	NA	NA	-50	191	combination_of_known_splicesites	FALSE	canonical	3	423	junction_1	412.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTATACATTTTGTT	NA	False	NA	12	True	AATAAA	-19	NA	72181625	72197545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_72181829_72196784_72196905_72197367
transcript_188565.known	chrX	+	1780	3	FSM	ENSG00000102309.15	ENST00000218432.10	1780	3	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_1	94.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTATGTGATTCTTAAC	NA	False	NA	NA	False	AATAAA	-12	NA	72181675	72198337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_72181829_72186460_72186535_72196784
transcript_188569.known	chrX	-	4344	3	FSM	ENSG00000186871.7	ENST00000373657.2	4344	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACTTTGTTTCACTGA	-31	True	NA	-6	True	ATTAAA	-23	NA	72239027	72204656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72208699_72237830_72237949_72238843
transcript_188570.known	chrX	-	4218	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCATCCACTTTGT	-31	True	NA	-14	True	ATTAAA	-15	NA	72239027	72204664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72208699_72238843
transcript_188572.known	chrX	-	1474	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9708	junction_6	1404.93534845321	934	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGTCATGTCAGGC	7	True	NA	85	True	CATAAA	-21	NA	72277248	72272041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
transcript_188575.known	chrX	-	1752	12	FSM	ENSG00000285547.1	ENST00000648922.1	1752	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.6720772412265	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGACCGAGCCAATG	-11	True	NA	NA	False	NA	NA	NA	72572843	72301810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72302245_72302809_72302935_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188577.known	chrX	-	1231	3	FSM	ENSG00000125931.11	ENST00000246139.9	1231	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACGGGCCAACTAGAGGT	-11	True	NA	-13	True	AATAAA	-43	NA	72306987	72301649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72302245_72302809_72302935_72306476
transcript_188579.known	chrX	-	1865	12	FSM	ENSG00000147099.21	ENST00000648452.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.1458928305267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAATCTTTGAAAACC	-33	True	NA	-23	True	NA	NA	NA	72572865	72329537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72330657_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188580.known	chrX	-	1807	12	FSM	ENSG00000147099.21	ENST00000647886.1	1807	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	69.4972500793739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATCTTTGGTTTTTTT	-27	True	NA	-42	True	NA	NA	NA	72572859	72329556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188581.known	chrX	-	1741	12	FSM	ENSG00000147099.21	ENST00000648855.1	1741	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.1523725322303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATCTTTGGTTTTTTT	393	False	NA	-42	True	NA	NA	NA	72572685	72329556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72330690_72330877_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188583.known	chrX	-	1754	11	FSM	ENSG00000147099.21	ENST00000373573.9	1754	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.634146831446	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	-11	True	NA	-1	True	AATAAA	-16	NA	72572843	72329515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188585.known	chrX	-	1941	11	FSM	ENSG00000147099.21	ENST00000649543.1	1941	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.9421688737043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGAGACCCTGTCCCAA	16	True	NA	NA	False	NA	NA	NA	72572816	72351143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72494195_72494382_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188586.known	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	52.9914971050271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	201	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188587.known	chrX	-	1625	10	FSM	ENSG00000147099.21	ENST00000373568.7	1625	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	57.4619573562359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGATTCCATCTCTACA	-10	True	NA	NA	False	NA	NA	NA	72572842	72351299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188591.known	chrX	-	2373	8	FSM	ENSG00000147099.21	ENST00000439122.7	2373	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.9475629392477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCATCATTATTAT	NA	False	NA	-1	True	AATAAA	-18	NA	72573083	72473415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72474730_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188592.known	chrX	-	5060	8	FSM	ENSG00000147099.21	ENST00000648577.1	5060	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.9761872172904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTGGGAGCATTTATA	16	True	NA	NA	False	NA	NA	NA	72572816	72484850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72489042_72490928_72491007_72494195_72494382_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188593.known	chrX	-	1220	7	FSM	ENSG00000147099.21	ENST00000648139.1	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.984323641481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCATCCCAGCACTTTG	16	True	NA	NA	False	NA	NA	NA	72572816	72351378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188594.known	chrX	-	2044	7	FSM	ENSG00000147099.21	ENST00000650126.1	2044	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	74.0645364230112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATAAATGTTAGCTGT	-15	True	NA	-16	True	AATAAA	-3	NA	72572847	72473430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72474730_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188596.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	71.2916544905503	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	-24	True	NA	1	True	AATAAA	-21	NA	72572856	72567581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188597.known	chrX	-	836	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	12.7104506432917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	-21	True	NA	1	True	AATAAA	-21	NA	72572853	72567581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
transcript_188599.known	chrX	-	6121	31	FSM	ENSG00000067177.15	ENST00000339490.7	6121	31	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_18	7.47261667690776	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTTTTTGTGATTGG	124	False	NA	-2	True	ATTAAA	-30	NA	72714181	72578814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
transcript_188602.known	chrX	-	2237	1	FSM	ENSG00000186288.5	ENST00000373519.1	2237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGGCTCTTAATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	73079512	73077275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_73077300_73079500
transcript_188603.known	chrX	-	2044	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGCCTTCTCATTGAG	0	True	NA	-9	True	AATAAA	-17	NA	73128080	73126036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_73126000_73128100
transcript_188604.known	chrX	-	2553	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTATTTCTTGTTAT	-12	True	NA	2	True	AATAAA	-36	NA	73214851	73212298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_73212300_73214900
transcript_188605.known	chrX	+	1642	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	-5	True	NA	3	True	AATAAA	-22	NA	73447052	73455171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73447756_73453516_73453663_73454378
transcript_188606.known	chrX	-	2519	4	FSM	ENSG00000230590.12	ENST00000668224.1	2519	4	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	24.8506650928211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAGGCTGAGGCAGGA	-12	True	NA	NA	False	AATACA	-42	NA	74292373	74278482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292168
transcript_188607.known	chrX	-	2778	4	FSM	ENSG00000230590.12	ENST00000429124.6	2778	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	18.8325958557674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAAAGGTTCCCAATG	928	False	NA	NA	False	ATTAAA	-19	NA	74292620	74278212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292426
transcript_188608.known	chrX	-	2838	4	FSM	ENSG00000230590.12	ENST00000662864.1	2838	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	14.7196014438797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATCATCTCAAAATCAC	-26	True	NA	NA	False	NA	NA	NA	74293574	74278181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74293351
transcript_188611.nnic	chrX	+	545	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-27	92	1	-92	intron_retention	FALSE	canonical	3	257	junction_2	134.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTGTTTGTTTGAA	-5	True	NA	12	True	CATAAA	-20	NA	73944339	73947338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_188614.known	chrX	+	1292	6	FSM	ENSG00000225470.8	ENST00000660546.1	1292	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	183.54726911616	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTTGTTCTGGGCAA	322	False	NA	1	True	AATATA	-13	NA	73944235	74004677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_74004269
transcript_188616.known	chrX	+	5352	6	FSM	ENSG00000225470.8	ENST00000660856.1	5352	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	167.29542731348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTGCAGCCTGGGCG	-1	True	NA	NA	False	NA	NA	NA	73944321	74007656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73998953_74000497_74004269
transcript_188624.known	chrX	+	3950	5	FSM	ENSG00000225470.8	ENST00000655090.1	3950	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	178.49562319564	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCGACAAAGACTGTCAAAA	283	False	NA	NA	False	NA	NA	NA	73944196	74007672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_74004269
transcript_188625.known	chrX	+	782	5	FSM	ENSG00000225470.8	ENST00000602294.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.296965224645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATGATGTTGTTCTGG	-3	True	NA	-3	True	AATATA	-9	NA	73944341	74004673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994863_73994962_73998767_73998845_74004269
transcript_188626.known	chrX	+	5113	5	FSM	ENSG00000225470.8	ENST00000657179.1	5113	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	193.980024744817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	-6	True	NA	NA	False	NA	NA	NA	73944316	74007534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_73998953_74000497_74004269
transcript_188627.known	chrX	+	3758	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	181.267757750793	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	73944323	74007684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
transcript_188632.known	chrX	+	3571	4	FSM	ENSG00000225470.8	ENST00000660840.1	3571	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	214.991989514855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	397	False	NA	NA	False	NA	NA	NA	73944310	74007529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_74004269
transcript_188635.nic	chrX	+	927	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-43	-274	0	0	intron_retention	FALSE	canonical	3	257	junction_2	134.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	1	True	NA	NA	False	AATAAA	-16	NA	73944323	73947704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_188636.nic	chrX	+	1050	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-28	-412	0	0	intron_retention	FALSE	canonical	3	257	junction_2	134.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATTAGTTAATGCCAT	-6	True	NA	NA	False	AAAAAG	-6	NA	73944338	73947842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_188638.known	chrX	+	3463	3	FSM	ENSG00000225470.8	ENST00000669149.1	3463	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	250	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	-3	True	NA	NA	False	NA	NA	NA	73944341	74007529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_74004269
transcript_188639.known	chrX	+	1492	4	FSM	ENSG00000225470.8	ENST00000662120.1	1492	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	217.642418251182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATAAAACTCGCTGA	-6	True	NA	8	True	AGTAAA	-27	NA	73944316	74000496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73999354
transcript_18864.known	chr1	+	1635	9	FSM	ENSG00000143819.13	ENST00000272167.10	1635	9	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_7	30.8828431333645	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	-1	True	NA	17	True	GATAAA	-17	NA	225810123	225845563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225810170_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_188641.known	chrX	+	4128	6	FSM	ENSG00000147100.11	ENST00000587091.6	4128	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	11.9431989014669	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGTATGTATGTTGC	-16	True	NA	20	True	AATAAA	-16	NA	74421492	74533916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74529212_74529442_74531332
transcript_188647.nic	chrX	+	3946	5	NIC	ENSG00000147100.11	novel	4128	6	NA	NA	-50	-3	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	71.6275086820699	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGGGTATGTATGT	NA	False	NA	17	True	AATAAA	-13	NA	74421442	74533913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74531332
transcript_188649.known	chrX	-	3478	5	FSM	ENSG00000131263.13	ENST00000349225.2	3478	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	46.0814496299758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTTGAGATTTGTCA	13	True	NA	NA	False	NA	NA	NA	74614617	74590117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
transcript_188652.known	chrX	-	10565	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	26.6207938774685	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	6	True	NA	NA	False	TATAAA	-15	NA	74614624	74582975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
transcript_188656.known	chrX	-	2361	17	FSM	ENSG00000131269.19	ENST00000645829.3	2361	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	83.0782528327961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACATTCCCATTTTCTA	1	True	NA	-22	True	ATTAAA	-5	NA	75156282	75053292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114620_75114633_75114753_75114835_75156104
transcript_188660.known	chrX	-	4592	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_15	38.1216765400241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	0	True	NA	-7	True	AATAAA	-20	NA	75156283	75051047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_188661.known	chrX	-	4595	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_15	40.7899769823694	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	0	True	NA	-7	True	AATAAA	-20	NA	75156283	75051047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
transcript_188665.known	chrX	-	2116	15	FSM	ENSG00000131269.19	ENST00000529949.5	2116	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	64.1970817570585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGGAGGAAAGAAAGAA	1	True	NA	-108	True	AATATA	-4	NA	75156282	75053444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75156104
transcript_188669.known	chrX	+	1135	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	58.0197010875247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAATAATTATCTTATG	17	True	NA	NA	False	NA	NA	NA	75274115	75303519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_18867.known	chr1	+	1789	9	FSM	ENSG00000143819.13	ENST00000614058.4	1789	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	116.357141486889	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCGGCTGGAACTCAGT	287	False	NA	13	True	GATAAA	-13	NA	225810411	225845559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225810616_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_188672.known	chrX	+	2474	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_2	21.3124898175277	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	-14	True	NA	NA	False	AATAAA	-32	NA	75274084	75304885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_188673.known	chrX	+	2234	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	57.5065213693195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	-9	True	NA	12	True	ATTAAA	-15	NA	75274089	75304600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_188675.known	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	55.9483889153407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	521	False	NA	-16	True	NA	NA	NA	75274727	75304572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_188683.known	chrX	+	1185	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_5	25.8487910742456	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCCTGTAGTGAA	13	True	NA	137	True	NA	NA	NA	76173061	76178314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
transcript_188688.known	chrX	+	977	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	226.934461904753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	-9	True	NA	19	True	AATAAA	-16	NA	76173039	76178196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
transcript_188693.known	chrX	+	3633	1	FSM	ENSG00000198934.5	ENST00000361470.4	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCTAATACACTGAC	-3	True	NA	NA	False	AATAAA	-17	NA	76427709	76431342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_76427700_76431300
transcript_188694.known	chrX	+	1666	3	FSM	ENSG00000196468.8	ENST00000439435.3	1666	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTCTAATTCTATTG	-2	True	NA	32	True	AATAAA	-20	NA	77447388	77457278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_77447949_77454156_77454261_77456276
transcript_188696.known	chrX	-	3071	10	FSM	ENSG00000085224.23	ENST00000624032.3	3071	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	22.2316646605747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAAGGGAACTGAAG	6	True	NA	95	True	GATAAA	-6	NA	77786208	77682304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_77683452_77683538_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_188702.nic	chrX	-	3368	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-8	177231	1	194	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAGATAAAACTTCTAAA	-10	True	NA	NA	False	AGTAAA	-5	NA	77786224	77682110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_188703.nic	chrX	-	3183	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-8	177416	1	9	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAACTGAAGAAAAAAAGA	-10	True	NA	NA	False	GATAAA	-15	NA	77786224	77682295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_188710.nic	chrX	-	2797	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-8	177802	1	-377	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGGATAATCAAGGGCA	-10	True	NA	4	True	AATACA	-43	NA	77786224	77682681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_188721.nic	chrX	-	1134	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-30	2054	-5	119	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGACAGTGAAAAGAGTAA	NA	False	NA	NA	False	GATAAA	-2	NA	77786238	77684358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_188722.known	chrX	-	1860	8	FSM	ENSG00000085224.23	ENST00000623321.3	1860	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	25.0867881319134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTATATGTTAAACT	-11	True	NA	NA	False	ATTAAA	-25	NA	77786225	77683506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77785981
transcript_188736.nnic	chrX	-	3352	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.5721302111058	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	1	True	NA	0	True	AATAAA	-16	NA	77895475	77826363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_188737.nnic	chrX	-	3412	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	1	True	NA	0	True	AATAAA	-16	NA	77895475	77826363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_188738.nnic	chrX	-	3409	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	1	True	NA	0	True	AATAAA	-16	NA	77895475	77826363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828039_77828558_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_188740.nnic	chrX	-	2284	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-27	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.5721302111058	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCCCTTAGAATGGGAA	1	True	NA	NA	False	AAAAAG	-13	NA	77895475	77827431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_188742.nnic	chrX	-	2344	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-27	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCCCTTAGAATGGGAA	1	True	NA	NA	False	AAAAAG	-13	NA	77895475	77827431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_188743.nnic	chrX	-	2328	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-27	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAAGAAAAGGACTCC	1	True	NA	NA	False	NA	NA	NA	77895475	77827444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828039_77828558_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_188746.known	chrX	-	4047	10	FSM	ENSG00000102158.22	ENST00000358075.11	4047	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	12.9099444873581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	0	True	AATAAA	-16	NA	77895593	77826363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_188754.known	chrX	+	505	3	FSM	ENSG00000131174.7	ENST00000647835.1	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	2245	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGCTTCTTAAATAGG	-1	True	NA	90	True	ATTAAA	-10	NA	77899484	77905461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_77899594_77902649_77902768_77905183
transcript_188755.known	chrX	+	605	4	FSM	ENSG00000131174.7	ENST00000373335.4	605	4	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	2165.92074339452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	77899439	77905385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_77899594_77901743_77901868_77902642_77902768_77905183
transcript_188761.known	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	2846	junction_8	160.155049873552	865	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	0	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
transcript_188771.known	chrX	-	2657	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	58.8607112880343	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTTCATTTTTTAG	-14	True	NA	-21	True	AATAAA	-13	NA	78139650	78129747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
transcript_188773.known	chrX	+	553	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	14	3887	3	-179	multi-exon	FALSE	canonical	2	6	junction_2	9.22970747098737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACCCCTGCAGCCAGC	4	True	NA	NA	False	NA	NA	NA	78747733	78754827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
transcript_188774.known	chrX	+	672	4	FSM	ENSG00000147145.14	ENST00000514744.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.0184900284226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGTATTCATCTTGG	1	True	NA	NA	False	NA	NA	NA	78747730	78755006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_78748035_78750173_78750224_78751209_78751312_78754790
transcript_188777.known	chrX	+	4454	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	9.22970747098737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCAGTCATACTTTGAT	-10	True	NA	11	True	AATAAA	-15	NA	78747719	78758714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
transcript_188779.known	chrX	-	1616	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	13.5292276202302	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	10	True	NA	-4	True	AATAAA	-16	NA	79367334	79360383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
transcript_188781.known	chrX	-	1698	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	102.655978880921	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCACTGTTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	79367552	79360387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
transcript_188784.known	chrX	-	6813	6	FSM	ENSG00000278530.5	ENST00000614414.4	6813	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_5	6.22896460095897	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTTTTTCTTTAAAA	-17	True	NA	-5	True	AATAAA	-18	NA	80335364	80228488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_80234591_80288905_80289058_80289663_80289772_80290877_80291025_80310078_80310234_80335215
transcript_188786.known	chrX	-	12921	41	FSM	ENSG00000165288.11	ENST00000373275.5	12921	41	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_31	15.3065345522754	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGTAGTTCTGAATTA	-7	True	NA	-19	True	AATGAA	-1	NA	80809877	80669502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684009_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561_80722788_80723747_80723877_80724932_80725068_80728751_80728906_80729915_80730021_80733455_80733497_80734117_80734219_80735126_80735198_80735987_80736089_80744031_80744254_80745568_80745730_80791853_80791953_80793621_80793773_80808538_80808599_80809012_80809043_80809245_80809305_80809440
transcript_188788.known	chrX	-	578	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	0	0	0	0	multi-exon	TRUE	canonical	3	303	junction_4	20.5951450589696	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGAAAAAGGGGAAGA	39	False	NA	-76	True	NA	NA	NA	81121683	81115053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
transcript_188789.known	chrX	-	547	6	FSM	ENSG00000198157.11	ENST00000491275.1	547	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	136.85320602748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAGAAGATGAAGAAGA	34	False	NA	59	True	AGTAAA	-17	NA	81121688	81115110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118781_81119787_81119818_81121534
transcript_188794.known	chrX	+	928	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	290.359583103434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTCTCTCATTCCTA	7	True	NA	16	True	ATTAAA	-16	NA	81202127	81297597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
transcript_188795.known	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	20.4613456709637	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	-19	True	NA	27	True	AATAAA	-23	NA	81202101	81298547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
transcript_188797.known	chrX	-	8465	22	FSM	ENSG00000072133.11	ENST00000262752.5	8465	22	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_5	9.79957887012223	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACCGTTGACCTCGCT	-21	True	NA	-11	True	AATAAA	-21	NA	84188199	84058349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84187818
transcript_188799.known	chrX	-	6200	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7.56372107783	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTTCTTTATTTTAA	6	True	NA	NA	False	AATAAA	-19	NA	84502453	84317873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
transcript_1888.nic	chr1	-	3629	6	NIC	ENSG00000227372.12	novel	2363	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	18	junction_3	53.1879685643285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGCTGAAAGCACTC	-24	True	NA	-22	True	TTTAAA	-19	NA	3747389	3737148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_3738514_3740232_3740388_3742429_3742518_3742803_3742912_3743060_3743191_3745606
transcript_18880.known	chr1	-	1680	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	360.247445823315	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	27	True	NA	-3	True	AATAAA	-18	NA	225924250	225919877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
transcript_188810.known	chrX	+	6480	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	5.1234753829798	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	-9	True	NA	12	True	AATAAA	-18	NA	85003876	85093315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
transcript_188812.known	chrX	+	2887	10	FSM	ENSG00000147180.17	ENST00000276123.7	2887	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	54.548653104871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTAAACCATGACTTTA	-9	True	NA	NA	False	NA	NA	NA	85244083	85271921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_85244192_85245902_85246023_85246929_85247184_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
transcript_188815.known	chrX	+	4124	9	FSM	ENSG00000147180.17	ENST00000373165.7	4124	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	32.714436797842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTTTATAAGTTTATT	41	False	NA	16	True	AATAAA	-18	NA	85244031	85273360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
transcript_18882.nic	chr1	-	3056	6	NIC	ENSG00000143811.20	novel	1680	7	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_5	389.187872370145	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-32	True	NA	-3	True	AATAAA	-18	NA	225924309	225919877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225923772_225924043
transcript_188820.known	chrX	-	5438	15	FSM	ENSG00000188419.14	ENST00000357749.7	5438	15	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	10.1672242514657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCATATTTTGT	-12	True	NA	-1	True	AATAAA	-20	NA	86047558	85861179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_85864822_85873051_85873213_85878964_85879064_85894187_85894285_85900645_85900710_85901083_85901189_85911260_85911339_85956152_85956379_85957854_85957976_85958860_85958978_85963664_85964053_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_188822.known	chrX	-	678	2	FSM	ENSG00000188419.14	ENST00000483950.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAAGTTTAAGATAAAG	-15	True	NA	NA	False	NA	NA	NA	86047561	86026957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_86027558_86047483
transcript_188823.known	chrX	+	2417	12	FSM	ENSG00000126733.22	ENST00000373125.9	2417	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	4.79496981608749	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTCACTGAGTATTT	-8	True	NA	2	True	AATAAA	-16	NA	86148450	86832602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_86149109_86376823_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813005_86813129_86813278_86814687_86814835_86816033_86816100_86832105
transcript_188824.nic	chrX	+	1791	11	NIC	ENSG00000126733.22	novel	2417	12	NA	NA	113854	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	5.78273291792038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTCACTGAGTATTT	NA	False	NA	2	True	AATAAA	-16	NA	86376821	86832602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813035_86813129_86813278_86814687_86814835_86816033_86816100_86832105
transcript_188827.known	chrX	+	5765	11	FSM	ENSG00000102271.14	ENST00000373119.9	5765	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	16.636105313444	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTGACAATGCTTG	4	True	NA	NA	False	AATAAA	-15	NA	87517801	87670050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
transcript_188832.known	chrX	+	3206	2	FSM	ENSG00000174740.8	ENST00000312600.4	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTGACTGCATAGTAT	0	True	NA	NA	False	AATAAA	-19	NA	91434838	91438584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_91434895_91435434
transcript_188837.known	chrX	+	9022	11	FSM	ENSG00000102290.23	ENST00000682573.1	9022	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.201373574541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTGTTATTGTGTGT	0	True	NA	NA	False	AATAAA	-17	NA	91779374	92623230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_92201374_92201456_92263113_92263144_92387734_92387934_92468298_92468323_92618263
transcript_188839.known	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	12.7216351150314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_18884.known	chr1	-	1549	6	FSM	ENSG00000143811.20	ENST00000612039.4	1549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	468.426557744114	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	NA	False	NA	-2	True	AATAAA	-19	NA	225924340	225919876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225922203_225922384_225923700_225923772_225924043
transcript_188842.known	chrX	-	1216	1	FSM	ENSG00000229132.2	ENST00000428832.2	1216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGGGCTGTCCTGCCAC	1299	False	NA	NA	False	NA	NA	NA	92114461	92113245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_92113200_92114500
transcript_188843.known	chrX	-	2649	1	FSM	ENSG00000186310.10	ENST00000373079.4	2649	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCCTTTTCTCCTGACT	8	True	NA	NA	False	AATAAA	-31	NA	93673578	93670929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_93670900_93673600
transcript_188844.known	chrX	+	3376	28	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	175	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	205.175330689952	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGGGTGATGGTACA	82	False	NA	-47	True	CATAAA	-22	NA	96685016	97469765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247842_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_188847.known	chrX	+	3730	27	FSM	ENSG00000147202.19	ENST00000373049.8	3730	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_23	209.480157510282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	63	False	NA	23	True	AGTAAA	-20	NA	96684711	97469835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
transcript_188854.nnic	chrX	+	800	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625735	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	321.600124378085	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310576	97469835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97346805_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_188860.nnic	chrX	+	715	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625676	0	at_least_one_novel_splicesite	FALSE	canonical	3	461	junction_1	128.937969582276	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310517	97469835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_188862.nnic	chrX	+	961	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	-5296	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	273.278246481494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGAAAGAATTATCCAG	NA	False	NA	NA	False	AAGAAA	-3	NA	97310578	97599701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97599252
transcript_188864.nnic	chrX	+	625	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625729	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	281.732475053906	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310570	97469835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_188867.nnic	chrX	+	476	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625715	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	318.814470604248	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310556	97469835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
transcript_188868.nnic	chrX	+	783	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625715	-5296	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_3	344.315101163003	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGAAAGAATTATCCAG	NA	False	NA	NA	False	AAGAAA	-3	NA	97310556	97599701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97599252
transcript_18887.known	chr1	-	3149	5	FSM	ENSG00000143811.20	ENST00000478402.5	3149	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	423.197575016682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-1	True	NA	-3	True	AATAAA	-18	NA	225924278	225919877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225923772_225924043
transcript_188872.nnic	chrX	+	348	3	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625738	-85858	at_least_one_novel_splicesite	FALSE	canonical	3	461	junction_1	76	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGCTGAACAAGAAAA	NA	False	NA	53	True	NA	NA	NA	97310579	97383977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97348080_97348281_97383908
transcript_188880.known	chrX	-	3768	8	FSM	ENSG00000000003.15	ENST00000373020.9	3768	8	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_3	79.2750314553384	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCATTTCTGGTTTT	0	True	NA	-33	True	AATAAA	-17	NA	100636806	100627107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
transcript_188882.nic	chrX	-	2186	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-35	-1916	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	383.411698585535	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTGTTTAAATTAACTT	5	True	NA	-24	True	AATAAA	-20	NA	100636724	100629024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636190
transcript_188884.nic	chrX	-	1753	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-87	-1916	combination_of_known_junctions	FALSE	canonical	3	99	junction_7	365.895937029497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTGTTTAAATTAACTT	3097	False	NA	-24	True	AATAAA	-20	NA	100636893	100629024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
transcript_188887.nic	chrX	-	1086	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-87	2371	combination_of_known_junctions	FALSE	canonical	3	99	junction_7	365.895937029497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTTCCTCTTGACTG	3097	False	NA	-15	True	AGTAAA	-16	NA	100636893	100629691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
transcript_188895.known	chrX	+	2074	15	FSM	ENSG00000101811.14	ENST00000415585.6	2074	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	107.938781780437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	NA	False	NA	29	True	AATAAA	-27	NA	100820358	100840932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100830807_100830868_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_188898.known	chrX	+	2570	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	22.773128564503	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	-8	True	NA	NA	False	AATAAA	-18	NA	100820390	100841520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_188900.nic	chrX	+	1974	14	NIC	ENSG00000101811.14	novel	2074	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_6	78.4125789932884	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	NA	False	NA	29	True	AATAAA	-27	NA	100820347	100840932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826684_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_188904.nic	chrX	+	2814	13	NIC	ENSG00000101811.14	novel	2074	15	NA	NA	-11	0	intron_retention	FALSE	canonical	3	266	junction_5	23.6725344838462	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	NA	False	NA	29	True	AATAAA	-27	NA	100820347	100840932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100838365_100840713
transcript_18891.known	chr1	-	1626	4	FSM	ENSG00000243709.1	ENST00000272134.5	1626	4	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_3	377.04936311075	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTAATTTTCTATT	-1	True	NA	-24	True	AATAAA	-38	NA	225889146	225886281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225887091_225887398_225887639_225887785_225888033_225888816
transcript_188912.known	chrX	-	2856	3	FSM	ENSG00000182489.9	ENST00000372956.3	2856	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGTCCTGAGTATTT	-1	True	NA	0	True	AAGAAA	-19	NA	100928917	100913444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_100915084_100922792_100923062_100927969
transcript_188934.known	chrX	-	3547	14	FSM	ENSG00000188917.15	ENST00000372936.4	3547	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_12	33.0230330233183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTAACATTCTCTAG	-9	True	NA	-11	True	AATAAA	-19	NA	101052111	101009349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051250_101051734_101051816
transcript_188935.known	chrX	-	3106	13	FSM	ENSG00000188917.15	ENST00000545398.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_12	25.4345565455084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATTCTCTAGTCCA	-14	True	NA	-7	True	AATAAA	-23	NA	101052116	101009345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051783
transcript_188954.known	chrX	+	2039	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGGACAAATACTGAA	0	True	NA	22	True	AATAAA	-23	NA	101078878	101096367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101079123_101094572
transcript_188958.known	chrX	+	3377	23	FSM	ENSG00000102384.14	ENST00000684367.1	3377	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1461884576083	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAAGGTGGGTGGATC	-4	True	NA	NA	False	NA	NA	NA	101098187	101163795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101098235_101098443_101098540_101099808_101099931_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_188960.known	chrX	-	1210	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	-29	True	NA	-18	True	AATAAA	-18	NA	101348742	101345660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101346661_101348532
transcript_188963.known	chrX	-	2951	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	-29	True	NA	-18	True	AATAAA	-18	NA	101348742	101345660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101348402_101348532
transcript_188967.known	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	32.3698247686878	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	-10	True	NA	-34	True	ATTAAA	-20	NA	101407925	101397802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_18897.nic	chr1	-	1987	3	NIC	ENSG00000243709.1	novel	1626	4	NA	NA	-55	-2	intron_retention	FALSE	canonical	3	924	junction_2	448	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTTGTAATTTTCTA	NA	False	NA	-26	True	AATAAA	-36	NA	225889201	225886283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225887639_225887785_225888033_225888816
transcript_188970.known	chrX	-	1431	6	FSM	ENSG00000102393.14	ENST00000466414.2	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	30.8090895678532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATTGCCAACTACT	860	False	NA	-35	True	ATTAAA	-19	NA	101407822	101397803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101398100_101398369_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_188971.known	chrX	+	761	5	FSM	ENSG00000241343.10	ENST00000553110.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	5316	junction_4	1300.52393288244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGTACACTGTAACAT	18	True	NA	6	True	AATAAA	-22	NA	101391010	101396155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_188972.known	chrX	+	399	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	3395.84152861997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	209	False	NA	25	True	AATAAA	-19	NA	101391201	101395795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_188974.known	chrX	+	2240	3	FSM	ENSG00000241343.10	ENST00000465340.5	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATAAGGAAATAAAA	18	True	NA	NA	False	AAAAAG	-9	NA	101391010	101393852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391047_101391458_101391565_101391754
transcript_188976.known	chrX	+	2296	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	0	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	-4	True	NA	28	True	AATAAA	-26	NA	101408221	101414133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101408320_101411935
transcript_188977.known	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	668.596706210519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	-4	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
transcript_188982.known	chrX	+	346	2	FSM	ENSG00000196440.12	ENST00000453574.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGGTGGTTCTCAAAT	16	False	NA	8	True	TTTAAA	-35	NA	101418298	101419183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101418371_101418909
transcript_188984.known	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	22.7596133534821	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	-8	True	NA	29	True	AATAAA	-30	NA	101550546	101554700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
transcript_188986.known	chrX	-	542	5	FSM	ENSG00000198960.11	ENST00000462302.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	69.6971125657297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTGCAGGCAATGTT	53	False	NA	NA	False	GGGGCT	-31	NA	101617913	101615512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101615761_101616671_101616767_101617282_101617371_101617502_101617585_101617884
transcript_188988.known	chrX	-	846	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	22.4251842554055	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	56	False	NA	NA	False	AATAAA	-28	NA	101617910	101615117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
transcript_188990.known	chrX	-	1840	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	-34	True	NA	NA	False	AATAAA	-21	NA	101618000	101615124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101616767_101617502_101617585_101617884
transcript_188991.known	chrX	+	3348	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	40.8839821935193	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	-9	True	NA	27	True	AATAAA	-37	NA	101623150	101627843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_188994.known	chrX	+	3730	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	36.6776498701866	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	NA	False	NA	27	True	AATAAA	-37	NA	101622796	101627843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_188997.known	chrX	+	3318	5	FSM	ENSG00000102401.20	ENST00000537169.1	3318	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	75.4730912312461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	201	False	NA	25	True	AATAAA	-35	NA	101623360	101627841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623431_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_188999.known	chrX	+	506	5	FSM	ENSG00000102401.20	ENST00000467808.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	76.3327419918871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGCTATTGTCGGGGA	96	False	NA	NA	False	NA	NA	NA	101623255	101624952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623431_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_189.nic	SIRV6	+	893	8	ISM	SIRV6A	SIRV605	1088	9	-135	543	-5	0	5prime_fragment	FALSE	canonical	0	0	junction_4	9586.5453546486	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	995	10788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724
transcript_189001.known	chrX	-	758	6	FSM	ENSG00000184867.14	ENST00000458024.5	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	95.4031446022614	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGAGGCAGTGGCCC	18	False	NA	NA	False	NA	NA	NA	101659831	101657310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659137_101659418_101659502_101659757
transcript_189002.known	chrX	-	612	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	95.8507172638786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATACACCAGGGGGA	13	False	NA	NA	False	GGGGCT	-18	NA	101659836	101657517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
transcript_189006.known	chrX	-	914	5	FSM	ENSG00000184867.14	ENST00000413506.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	114.2702389076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCGGAGACTTCCAGG	15	False	NA	NA	False	GGGGCT	-23	NA	101659834	101657086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659757
transcript_189009.known	chrX	-	580	5	FSM	ENSG00000184867.14	ENST00000431597.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	123.780046857319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTTGGGTCAGGATTCA	53	False	NA	NA	False	NA	NA	NA	101659796	101657400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101657716_101658072_101658143_101659075_101659149_101659418_101659502_101659757
transcript_189013.known	chrX	+	1110	3	FSM	ENSG00000184905.9	ENST00000372780.6	1110	3	0	0	0	0	multi-exon	TRUE	canonical	3	163	junction_2	5.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGAATCTGTCTGTTT	-3	True	NA	17	True	AATAAA	-17	NA	102125678	102127712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102125807_102126372_102126446_102126803
transcript_189016.known	chrX	-	777	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	3.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGATAGACTATTTC	-17	True	NA	-22	True	AATAAA	-15	NA	102155977	102153711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_102154303_102154743_102154811_102155858
transcript_189017.known	chrX	-	634	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	0	0	0	multi-exon	TRUE	canonical	3	1351	junction_1	27	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGACTCCTGTGGTTG	11	True	NA	-12	True	AATAAA	-20	NA	102516739	102513681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_102514125_102515063_102515181_102516665
transcript_189019.known	chrX	+	964	6	FSM	ENSG00000271147.8	ENST00000466616.5	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	37.992630864419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	-2	True	NA	14	True	ATTAAA	-17	NA	102599525	102650145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
transcript_18902.nic	chr1	-	1717	5	NIC	ENSG00000143768.13	novel	2085	5	NA	NA	-148	187	intron_retention	FALSE	canonical	3	462	junction_1	1141.78180380491	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCTCTTTAGTTTAT	-18	True	NA	-28	True	ATTAAA	-14	NA	225941531	225936410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225936578_225937382_225937805_225939360_225939601_225939755_225940003_225940890
transcript_189026.known	chrX	+	668	4	FSM	ENSG00000271147.8	ENST00000475738.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	30.3900568534439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGGTAAGCAAATAGAG	-2	True	NA	NA	False	AATAGA	-14	NA	102599525	102639527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399
transcript_189029.known	chrX	+	2899	6	FSM	ENSG00000125962.16	ENST00000246174.6	2899	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	35.5674008046694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	NA	False	NA	26	True	AATAAA	-25	NA	102599167	102604159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599267_102599347_102599573_102599711_102599848_102600919_102601033_102601463_102601510_102601879
transcript_189031.nic	chrX	+	2524	4	NIC	ENSG00000125962.16	novel	2899	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	34.08160142299	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-17	True	NA	26	True	AATAAA	-25	NA	102599510	102604159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_102599573_102599711_102599848_102601463_102601510_102601879
transcript_189032.known	chrX	+	2777	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	37	junction_1	33.1595469745224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-18	True	NA	26	True	AATAAA	-25	NA	102599509	102604159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
transcript_189033.known	chrX	+	2636	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	10	True	NA	26	True	AATAAA	-25	NA	102599537	102604159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599848_102601463_102601510_102601879
transcript_189038.known	chrX	+	3534	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	0	2	0	0	multi-exon	TRUE	canonical	0	0	junction_1	33.3204141630923	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	-3	True	NA	16	True	AATAAA	-19	NA	102712447	102717731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
transcript_189039.known	chrX	+	5582	8	FSM	ENSG00000286237.1	ENST00000652409.1	5582	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.2773269383944	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCACTTATTTAAGTCTC	9	False	NA	-8	True	AATAAA	-6	NA	102712494	102753530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102720533_102720826_102720956_102721028_102747816_102747912_102748698
transcript_189041.known	chrX	+	4031	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	1	True	NA	19	True	AATAAA	-15	NA	102745978	102752438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102746175_102747816_102747912_102748698
transcript_18906.known	chr1	-	2019	4	FSM	ENSG00000143768.13	ENST00000366820.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	2929	junction_2	117.533919454012	4333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	-1	True	NA	-13	True	AATAAA	-14	NA	225941220	225936602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225937805_225939360_225939601_225939755_225940003_225940890
transcript_189061.known	chrX	+	1029	1	FSM	ENSG00000102128.8	ENST00000218249.7	1029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTCTGTCAATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	102937271	102938300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102937300_102938300
transcript_189063.known	chrX	-	795	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	19.5	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATATTCTTTTTTTGT	0	True	NA	-5	True	AATAAA	-18	NA	103064171	103062650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103063280_103063641_103063732_103064095
transcript_189066.known	chrX	+	1312	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	17.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	-10	True	NA	66	True	ATTAAA	-25	NA	103215107	103217246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103215239_103215681_103215765_103216148
transcript_189067.nnic	chrX	+	1382	3	NNC	ENSG00000102409.10	novel	1312	3	NA	NA	140	-51	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	334.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTTGATGGGCAAGT	146	False	NA	15	True	AATAAA	-16	NA	103215263	103217195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103215516_103215681_103215765_103216148
transcript_189068.known	chrX	+	1066	2	FSM	ENSG00000102409.10	ENST00000372691.3	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGGTGTGTGTGTACG	6	True	NA	-81	True	NA	NA	NA	103215123	103217099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103215239_103216148
transcript_189069.known	chrX	-	1174	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_1	28	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	-3	True	NA	NA	False	AATAAA	-20	NA	103255155	103252994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103254018_103254604_103254678_103255077
transcript_189070.known	chrX	-	1131	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	17	False	103255193	NA	False	AATAAA	-20	NA	103255185	103252994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103254018_103255077
transcript_189073.known	chrX	-	1046	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_2	9.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	-1	True	NA	-1	True	AATAAA	-21	NA	103276750	103273690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103274591_103275274_103275343_103276672
transcript_189076.known	chrX	-	736	3	FSM	ENSG00000133134.12	ENST00000449185.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	269	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGAGTCATAGTTTGC	30	True	NA	NA	False	NA	NA	NA	103310935	103309671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103309982_103310357_103310434_103310585
transcript_189077.known	chrX	-	843	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	36	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCATTCTTTTTTAC	19	False	103311009	-21	True	AATAAA	-17	NA	103310990	103309345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103309982_103310357_103310434_103310859
transcript_189078.known	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	249	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	2	True	NA	NA	False	NA	NA	NA	103311007	103309501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103309982_103310357_103310434_103310895
transcript_189079.known	chrX	+	1134	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	11	True	NA	NA	False	AATAAA	-20	NA	103330238	103332326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103330305_103330922_103331041_103331376
transcript_189081.known	chrX	+	1028	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_2	29.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCAGCACGTATTA	7	True	NA	6	True	AATAAA	-18	NA	103356505	103358462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103356607_103357082_103357162_103357614
transcript_189084.known	chrX	+	699	2	FSM	ENSG00000185222.10	ENST00000372656.5	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACACATTTGTAAAAAA	-10	True	NA	8	True	AATAAA	-5	NA	103356488	103358195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103356607_103357614
transcript_189085.known	chrX	+	1938	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	19	True	NA	-1	True	AATAAA	-11	NA	103356517	103358455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103356500_103358500
transcript_189086.known	chrX	+	913	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_2	2535	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTATTGTCTCATTAA	34	True	NA	48	True	AATAAA	-21	NA	103376394	103378077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103376614_103377027_103377107_103377462
transcript_189087.known	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	4923	junction_2	646.5	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	1	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103376614_103377027_103377107_103377509
transcript_189093.known	chrX	+	805	2	FSM	ENSG00000166681.14	ENST00000372635.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAGCAATCTATAC	46	False	NA	31	True	AATAAA	-4	NA	103376406	103378060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103376614_103377462
transcript_189094.known	chrX	+	753	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	4923	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	0	True	NA	42	True	AATAAA	-15	NA	103376915	103378071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103377107_103377509
transcript_1891.known	chr1	-	2564	6	FSM	ENSG00000227372.12	ENST00000650037.1	2564	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	58.6808316232822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTCACGCTATACT	640	False	NA	-85	True	NA	NA	NA	3746725	3737211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606_3746187_3746436
transcript_189101.known	chrX	+	681	4	FSM	ENSG00000133142.19	ENST00000490644.5	681	4	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_2	461.454945435269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGGGAGAGTCAGAGA	0	True	NA	78	True	GATAAA	-45	NA	103585522	103586905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585625_103585858_103586108_103586218_103586292_103586648
transcript_189103.known	chrX	+	1008	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	452	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTACATTTTTGTAAAA	40	True	NA	23	True	ATTAAA	-31	NA	103585562	103587526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585625_103586218_103586292_103586653
transcript_189107.known	chrX	+	1571	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	468.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	10	True	NA	-19	True	AAAACA	-11	NA	103585532	103587694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585625_103585858_103586292_103586648
transcript_189110.known	chrX	+	338	3	FSM	ENSG00000133142.19	ENST00000425011.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	73.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGGATAAAGGAAAGCC	14	False	NA	22	True	AAAACA	-27	NA	103585614	103586849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585684_103586218_103586292_103586653
transcript_189114.known	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	16	True	NA	16	True	AATAAA	-32	NA	103607962	103609927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103608059_103608603_103608674_103609037
transcript_189116.known	chrX	+	721	3	FSM	ENSG00000172465.14	ENST00000372626.7	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTCTGTTTGCAT	-19	True	NA	NA	False	NA	NA	NA	103628703	103630447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103628794_103629493_103629562_103629884
transcript_189118.known	chrX	+	1164	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	28	False	NA	NA	False	AATAAA	-24	NA	103628998	103630953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103629026_103629493_103629562_103629884
transcript_189119.known	chrX	+	1200	3	FSM	ENSG00000172465.14	ENST00000372625.8	1200	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	4	True	NA	NA	False	AATAAA	-24	NA	103628974	103630953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103629026_103629493_103629574_103629884
transcript_189123.nic	chrX	-	2074	5	NIC	ENSG00000123562.18	novel	869	5	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	272	junction_2	785.337944772822	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	1192	False	NA	-5	True	AATAAA	-25	NA	103686909	103675497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103686630
transcript_189124.known	chrX	-	849	5	FSM	ENSG00000123562.18	ENST00000418819.5	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	740.426566244081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTAATGAAGTTGTGGC	17	True	NA	NA	False	AAGAAA	-31	NA	103688041	103676496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103687988
transcript_189125.known	chrX	-	562	5	FSM	ENSG00000123562.18	ENST00000422355.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	857.88967093677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGATCCGTGAGGAAG	2	True	NA	NA	False	NA	NA	NA	103686705	103676825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678621_103684680_103684730_103685170_103685261_103686630
transcript_189127.known	chrX	-	869	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	800.464357420116	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGTATGCAAATTG	-2	True	NA	NA	False	AAGAAA	-16	NA	103686709	103676553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
transcript_189128.known	chrX	-	899	5	FSM	ENSG00000123562.18	ENST00000434230.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	749.48332202925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATGAAGTTGTGGCAG	20	True	NA	NA	False	AAGAAA	-33	NA	103688038	103676494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103687988
transcript_189130.known	chrX	-	451	4	FSM	ENSG00000123562.18	ENST00000498064.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	492.100260787034	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	1285	False	NA	NA	False	NA	NA	NA	103686816	103676978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103686630
transcript_189131.known	chrX	-	1824	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	743.615641458827	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	-6	True	NA	-3	True	AATAAA	-27	NA	103688064	103675495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
transcript_189132.nnic	chrX	-	1851	4	NIC	ENSG00000123562.18	novel	1866	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_2	902.368365284747	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	-8	True	NA	-5	True	AATAAA	-25	NA	103686715	103675497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_103677052_103678498_103678621_103685170_103685261_103686630
transcript_189134.known	chrX	-	370	4	FSM	ENSG00000123562.18	ENST00000467755.5	370	4	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_2	674.720847626796	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	1417	False	NA	NA	False	NA	NA	NA	103686684	103676978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103686630
transcript_189135.known	chrX	-	1965	4	FSM	ENSG00000123562.18	ENST00000433176.6	1965	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	787.978144084946	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-7	True	AATAAA	-23	NA	103688158	103675499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103687988
transcript_189138.known	chrX	-	1830	3	FSM	ENSG00000123562.18	ENST00000451301.5	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	916	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	1283	False	NA	-7	True	AATAAA	-23	NA	103686818	103675499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103685170_103685261_103686630
transcript_189139.known	chrX	-	582	3	FSM	ENSG00000123562.18	ENST00000492116.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	76.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGTTTAAGAATAGA	NA	False	NA	NA	False	AAGAAA	-32	NA	103688122	103676693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103685170_103685261_103687988
transcript_189140.nnic	chrX	-	2374	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1570	-4355	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	68	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGACTGGGAGGAAGTG	9667	False	NA	-6	True	AATAAA	-21	NA	103767045	103753752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_103755672_103764961_103765155_103766783
transcript_189141.nic	chrX	-	799	3	NIC	ENSG00000288597.1	novel	2186	12	NA	NA	1570	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	54	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	9667	False	NA	0	True	ATTAAA	-22	NA	103767045	103761191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_103761536_103764961_103765155_103766783
transcript_189149.nnic	chrX	+	3591	10	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31114	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	60.2546038402927	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	-3	True	NA	14	True	AATAAA	-23	NA	103742603	103792619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103743108_103746874_103746923_103774216_103774363_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_189152.nnic	chrX	+	3571	9	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31240	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	48.4327820282915	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	NA	False	NA	14	True	AATAAA	-23	NA	103742477	103792619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103743108_103746874_103746923_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_189156.known	chrX	+	2896	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_6	24.7549097262655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	9	True	NA	14	True	AATAAA	-23	NA	103776849	103792619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_189157.known	chrX	+	1666	4	FSM	ENSG00000158427.15	ENST00000419165.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	117.740769867064	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGGTTCATTCTG	8	True	NA	NA	False	AATAAA	-25	NA	103918895	103965987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103919293_103962020_103962724_103964505_103964623_103965538
transcript_189158.known	chrX	+	663	4	FSM	ENSG00000158427.15	ENST00000569577.1	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	107.058654743816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAATCGTTGTTGTCT	27	False	NA	NA	False	AATAAA	-6	NA	103962674	103965968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103962724_103964227_103964295_103964505_103964623_103965538
transcript_189159.known	chrX	-	1918	4	FSM	ENSG00000231728.5	ENST00000653685.2	1918	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGATCATATTTGTTA	9	True	NA	NA	False	AATAAA	-26	NA	103919088	103880645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103882116_103918086_103918226_103918408_103918461_103918831
transcript_189161.known	chrX	+	2186	3	FSM	ENSG00000158427.15	ENST00000436583.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	111.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGACTCTGTGGTTC	21	False	NA	NA	False	AATAAA	-19	NA	103962668	103965981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103964295_103964505_103964623_103965538
transcript_189162.known	chrX	+	652	3	FSM	ENSG00000158427.15	ENST00000540220.6	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	14.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	4	True	NA	NA	False	AATAAA	-14	NA	103962626	103965976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103962724_103964505_103964623_103965538
transcript_189164.known	chrX	+	1241	4	FSM	ENSG00000166707.12	ENST00000422784.5	1241	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	14	False	NA	10	True	TATAAA	-8	NA	104112543	104115842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_104113002_104113194_104113247_104113433_104113574_104115251
transcript_189167.known	chrX	+	312	3	FSM	ENSG00000166707.12	ENST00000603049.1	312	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGAAATAACGGGGGAA	330	False	NA	NA	False	AATAAA	-33	NA	104112888	104113580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_104113002_104113194_104113247_104113433
transcript_189169.known	chrX	-	731	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATAGTGGGATGCTT	4	True	NA	NA	False	NA	NA	NA	104156988	104130603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_104131224_104156877
transcript_189171.known	chrX	+	7624	6	FSM	ENSG00000123575.9	ENST00000493442.2	7624	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	13.6381816969859	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	4	True	NA	24	True	AATAAA	-24	NA	104166452	104195902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188307_104189607
transcript_189172.known	chrX	+	4173	4	FSM	ENSG00000157502.13	ENST00000357175.6	4173	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATTTTTACTTCATC	-4	True	NA	16	True	AATAAA	-17	NA	106168304	106208956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106168426_106171011_106171140_106203984_106204171_106205218
transcript_189173.known	chrX	+	3957	3	FSM	ENSG00000157502.13	ENST00000372552.1	3957	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGATTTTTACTTCAT	3	True	NA	15	True	AATAAA	-16	NA	106201735	106208955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106201770_106203984_106204171_106205218
transcript_189174.known	chrX	+	3852	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	7.15095061334898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTGGTCTCCTGTC	16	True	NA	6	True	ATTAAA	-16	NA	106611977	106679439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_189175.known	chrX	+	2880	13	FSM	ENSG00000147231.14	ENST00000421550.1	2880	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	9.14201229975594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	588	False	NA	4	True	ATTAAA	-14	NA	106612656	106679437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637795_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_189177.known	chrX	+	2803	7	FSM	ENSG00000133135.14	ENST00000255499.3	2803	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	2.87228132326901	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGTATTAGGATGTTT	-5	True	NA	31	True	AATAAA	-38	NA	106726700	106797016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106727398_106772912_106773161_106785064_106785137_106787917_106788001_106790185_106790283_106791065_106791235_106795579
transcript_189178.known	chrX	+	5729	21	FSM	ENSG00000133138.20	ENST00000357242.10	5729	21	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_11	4.21040378111174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTACTTAAAAAGATTA	-42	True	NA	NA	False	AATAAA	-23	NA	106802672	106876150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106850024_106850311_106853520_106853651_106854197_106854297_106865558_106865628_106865792_106866034_106866796_106866863_106868392_106868477_106869484_106869542_106870715_106870814_106873569
transcript_189180.known	chrX	+	4098	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.39934634239519	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATTTATAAGAAAAA	-10	True	NA	NA	False	AATGAA	-4	NA	106802704	106830083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
transcript_189192.nic	chrX	-	1774	8	FSM	ENSG00000089682.17	ENST00000685964.1	7005	8	-22	5253	-21	0	multi-exon	FALSE	canonical	0	0	junction_3	28.6128271506159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	NA	False	NA	-14	True	AATAAA	-21	NA	107118844	107067137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_189193.known	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	16.709943812659	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	5	True	NA	-14	True	AATAAA	-21	NA	107118804	107067137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_1892.known	chr1	-	2529	6	FSM	ENSG00000227372.12	ENST00000636630.1	2529	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	62.6335373422258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCATGCTCGGCCTAAA	342	False	NA	NA	False	NA	NA	NA	3747023	3737593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742961_3743060_3743191_3745606_3746187_3746436
transcript_189200.known	chrX	-	1515	7	FSM	ENSG00000198088.10	ENST00000484614.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.03957069398096	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	2	True	NA	-49	True	AATAAA	-21	NA	107206433	107123471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107167648_107167785_107175088_107175194_107206272
transcript_189202.known	chrX	+	2070	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	23.0120741254576	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	6	True	NA	19	True	AATAAA	-19	NA	107628509	107651026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_189205.known	chrX	+	1434	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	123.427063482852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAACCCCAAACCTAGTC	-14	True	NA	NA	False	NA	NA	NA	107628489	107650469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_189207.known	chrX	-	1812	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	36	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	5423	False	NA	NA	False	AATAAA	-27	NA	107716545	107713220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107716314
transcript_189208.known	chrX	-	2027	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	13	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	4833	False	NA	NA	False	AATAAA	-27	NA	107717135	107713220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107716689
transcript_189209.known	chrX	-	2269	3	FSM	ENSG00000157514.18	ENST00000372383.9	2269	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	-21	True	NA	NA	False	AATAAA	-27	NA	107775787	107713220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107775099
transcript_189210.known	chrX	+	2251	10	FSM	ENSG00000080561.14	ENST00000443968.2	2251	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	1.6629588385662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATATTGCAGATTTAAT	328	False	NA	12	True	AATAAA	-25	NA	107826413	107927193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107826431_107840669_107841386_107854608_107854705_107903957_107904066_107905477_107905627_107916001_107916130_107917505_107917650_107924342_107924505_107926093_107926302_107926670
transcript_189212.known	chrX	+	7333	10	FSM	ENSG00000080561.14	ENST00000262843.11	7333	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3.23560439523579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTGTCTCTCGCTG	2	True	NA	NA	False	AATAAA	-19	NA	107825865	107931637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107826431_107840669_107841386_107854608_107854705_107903957_107904066_107905477_107905627_107916001_107916130_107917505_107917740_107924342_107924505_107926093_107926302_107926670
transcript_189213.known	chrX	-	779	6	FSM	ENSG00000101843.19	ENST00000372295.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	242.225019351842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTTCTACTGTTGT	-3	True	NA	NA	False	NA	NA	NA	108091542	108084774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_189214.known	chrX	-	878	6	FSM	ENSG00000101843.19	ENST00000372296.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	282.784299422723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAATGTTCCTCCAT	-3	True	NA	NA	False	NA	NA	NA	108091542	108084596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_189215.known	chrX	-	1470	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_2	35.7936796096741	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAATTTTTCTTTCAA	-3	True	NA	-6	True	AATAAA	-13	NA	108091542	108084206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
transcript_189216.known	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	234.772762474696	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	-3	True	NA	NA	False	TATAAA	-19	NA	108091542	108084829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
transcript_189218.known	chrX	+	2501	14	FSM	ENSG00000101844.18	ENST00000372246.7	2501	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.37013569768335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	10	True	NA	14	True	AATAAA	-22	NA	108091783	108154671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108091837_108126076_108126188_108126792_108127095_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_189219.known	chrX	+	2205	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.60901893634161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	4	True	NA	14	True	AATAAA	-22	NA	108091777	108154671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_189221.known	chrX	-	6750	46	FSM	ENSG00000197565.17	ENST00000394872.6	6750	46	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_23	47.0712409905992	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTTGATGTTCCTTTA	2	True	NA	-22	True	AATAAA	-23	NA	108438430	108155607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108183721_108183773_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_189222.known	chrX	-	6685	45	FSM	ENSG00000197565.17	ENST00000334504.12	6685	45	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_38	33.0606364400049	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACTCTTTTGATGTT	10	True	NA	-28	True	AATAAA	-17	NA	108438422	108155613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_189224.known	chrX	-	6627	44	FSM	ENSG00000197565.17	ENST00000621266.4	6627	44	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	38.4897140214317	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTTGATGTTCCTTTA	2	True	NA	-22	True	AATAAA	-23	NA	108438430	108155607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_189228.nnic	chrX	-	4516	38	NNC	ENSG00000197565.17	novel	865	6	NA	NA	-35	-4625	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	34.499552722564	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAAGTTTTGGTTTTGA	1018	False	NA	-8	True	AATAAA	-14	NA	108438465	108166255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_108166812_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_189236.nic	chrX	-	1103	13	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-35	47320	-35	10864	5prime_fragment	FALSE	canonical	3	114	junction_6	27.8581476212775	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTCTCTATTTGATC	1018	False	NA	NA	False	NA	NA	NA	108438465	108202927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_189241.nic	chrX	-	2615	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-35	56599	-35	1585	5prime_fragment	FALSE	canonical	3	139	junction_2	25.2871508873578	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGTATAAAACAGA	1018	False	NA	NA	False	AATAAA	-16	NA	108438465	108212206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_189247.known	chrX	-	1889	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	86.4908472999696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTATGTATGTA	2	True	NA	-19	True	AATAAA	-19	NA	108438430	108267641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
transcript_189248.known	chrX	-	6380	46	NNC	ENSG00000197565.17	novel	6750	46	NA	NA	0	-277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	40.8125253105247	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAAGCCTGAATTGGC	2	True	NA	NA	False	CATAAA	-38	NA	108438430	108155890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108164922_108164957_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_189249.known	chrX	+	6531	53	FSM	ENSG00000188153.14	ENST00000328300.11	6531	53	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_42	53.2698694768707	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	19	True	NA	22	True	ATTAAA	-19	NA	108439837	108697545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108670227_108670237_108674744_108674754_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
transcript_189256.known	chrX	+	6427	51	FSM	ENSG00000188153.14	ENST00000361603.7	6427	51	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_41	48.9054761759867	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	45	False	NA	22	True	ATTAAA	-19	NA	108439923	108697545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
transcript_189273.nic	chrX	+	2771	24	ISM	ENSG00000188153.14	ENST00000328300.11	6531	53	-50	99323	-50	-28333	5prime_fragment	TRUE	canonical	3	128	junction_18	13.8185650854491	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATAACCAGCAGTTTAA	-31	True	NA	NA	False	AATAAA	-26	NA	108439787	108598222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376
transcript_189278.known	chrX	+	1489	3	FSM	ENSG00000237863.3	ENST00000436013.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCCACTATTCTTTTT	-11	True	NA	NA	False	TTTAAA	-26	NA	108736512	108739223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108736592_108737264_108737880_108738428
transcript_189279.known	chrX	+	1561	3	FSM	ENSG00000237863.3	ENST00000664433.1	1561	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCCACTATTCTTTTT	2881	False	NA	NA	False	TTTAAA	-26	NA	108736484	108739223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108736592_108737264_108737924_108738428
transcript_189280.known	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	5.31245915016974	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	-7	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
transcript_189281.known	chrX	+	2692	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	58.349700084919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	0	True	NA	13	True	AATAAA	-14	NA	109535780	109544684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
transcript_189282.known	chrX	-	5032	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	46.4698707647104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATTTGTACTTCATT	475	False	NA	-17	True	AATAAA	-16	NA	109733403	109641336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
transcript_189283.known	chrX	-	4891	16	FSM	ENSG00000068366.21	ENST00000672401.1	4891	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_14	28.8286894140773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTTGTACTTCATTAT	-11	True	NA	-15	True	AATAAA	-18	NA	109733257	109641334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109696143_109696197_109733138
transcript_189284.known	chrX	-	4602	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	47.3368842684528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTTGGAGAGAA	26	True	NA	-115	True	GATAAA	-11	NA	109733220	109641533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
transcript_189289.known	chrX	-	1473	1	FSM	ENSG00000176076.7	ENST00000372101.3	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGACTCTTCTCTCAGA	-3	True	NA	0	True	AATAAA	-18	NA	109625172	109623699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109623700_109625200
transcript_189294.known	chrX	+	5570	7	FSM	ENSG00000157600.12	ENST00000372068.7	5570	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.69684550213647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	23	True	NA	17	True	ATTAAA	-14	NA	110003113	110177788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_110003179_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_189296.known	chrX	+	5567	7	FSM	ENSG00000157600.12	ENST00000372073.5	5567	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	4	True	NA	17	True	ATTAAA	-14	NA	110003094	110177788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_110003157_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_189297.known	chrX	+	4975	6	FSM	ENSG00000157600.12	ENST00000372072.7	4975	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.57820925690384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCCAGGAGTCCTGGCC	NA	False	NA	13	True	ATTAAA	-10	NA	110002634	110177784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_110002773_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_189299.known	chrX	-	5350	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	17.3020230031057	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCATTTTATGTTTCTT	25	True	NA	-7	True	AATAAA	-14	NA	110318085	110194185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
transcript_18930.known	chr1	-	3987	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_1	13.3998341614945	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-2	True	NA	-3	True	AATAAA	-23	NA	225999343	225982701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_189300.known	chrX	-	3052	5	FSM	ENSG00000101935.12	ENST00000372059.6	3052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	63.4049485450465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGTAAATAAAACAAGCAA	26	True	NA	NA	False	AAAAAG	-7	NA	110318084	110196371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110317598
transcript_189302.known	chrX	-	546	2	FSM	ENSG00000101935.12	ENST00000496695.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGTGTGTTTCTTTTCT	3516	False	NA	0	True	AATAAA	-18	NA	110317756	110309149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_110309538_110317598
transcript_189305.known	chrX	-	1658	12	FSM	ENSG00000101938.15	ENST00000444321.2	1658	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	8.89609441652732	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATCTCCTCCAAAGAG	14	True	NA	NA	False	NA	NA	NA	110795819	110676056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_110676362_110679335_110679426_110681481_110681650_110688593_110688804_110694162_110694332_110700653_110700722_110719834_110719929_110721384_110721528_110759660_110759755_110762694_110762808_110792087_110792216_110795743
transcript_189309.known	chrX	+	9126	18	FSM	ENSG00000077264.16	ENST00000372007.10	9126	18	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_11	9.82159191883216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTGCTTCTGTCTTCTG	20	True	NA	18	True	AATAAA	-19	NA	111096190	111227361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076_111123279_111142095_111142197_111147736_111147891_111152409_111152448_111162914_111163047_111163561_111163728_111173017_111173082_111192126_111192176_111192505_111192619_111194300_111194419_111195841_111195942_111196443_111196641_111216420_111216559_111220357
transcript_189319.nnic	chrX	+	1441	6	NNC	ENSG00000077264.16	novel	9126	18	NA	NA	-55	26098	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	8.35703296631047	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGAATTCAAAGTCCT	NA	False	NA	NA	False	AAGAAA	-7	NA	111096135	111124884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076_111123279_111124250
transcript_189321.nic	chrX	+	2413	5	ISM	ENSG00000077264.16	ENST00000372007.10	9126	18	-55	102477	-55	26098	5prime_fragment	FALSE	canonical	3	25	junction_1	7.64852927038918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGAATTCAAAGTCCT	NA	False	NA	NA	False	AAGAAA	-7	NA	111096135	111124884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076
transcript_189324.known	chrX	+	710	5	FSM	ENSG00000077264.16	ENST00000484442.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.5593560409714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTCCTTCTCAGGATC	108	False	NA	NA	False	AAAAAG	-6	NA	111096324	111098786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111096416_111096542_111096738_111097389_111097457_111097574_111097685_111098539
transcript_18933.known	chr1	+	799	5	FSM	ENSG00000163041.13	ENST00000366816.5	799	5	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_1	2471.22737723585	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	226061850	226071523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226062095_226062734_226062812_226064328_226064480_226065655_226065810_226071350
transcript_189331.known	chrX	-	3532	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	8.44590630621328	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTGACTTGAATTGA	11	True	NA	1	True	AATAAA	-21	NA	111270483	111245098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
transcript_189332.known	chrX	-	2476	7	FSM	ENSG00000077279.20	ENST00000488120.2	2476	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTAGTTTAGAAATTAT	NA	False	NA	NA	False	AAAAAG	-9	NA	111412429	111300607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_111301744_111312641_111312737_111330918_111331042_111333050_111333154_111400989_111401331_111410034_111410421_111412137
transcript_189335.known	chrX	+	4113	27	FSM	ENSG00000101901.12	ENST00000394780.8	4113	27	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	13.4541188343744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	-31	True	NA	20	True	AATAAA	-25	NA	111681169	111760649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
transcript_189346.known	chrX	+	693	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	34.1787580230763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGGAAATTTTATGTT	-12	True	NA	13	True	AATAAA	-19	NA	111681188	111688128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
transcript_189347.known	chrX	+	1098	5	FSM	ENSG00000101901.12	ENST00000492038.5	1098	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.5538985608922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGGACTTATACCAA	-7	True	NA	NA	False	NA	NA	NA	111681193	111688642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682235_111682295_111684964_111685104_111686136_111686175_111687886
transcript_189348.known	chrX	+	2770	4	FSM	ENSG00000101901.12	ENST00000371979.7	2770	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	20.5426385841741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTGAAATGTTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	111681117	111690172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111687886
transcript_189349.known	chrX	+	916	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	29.5296461204668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTGGAATTGGAATC	-22	True	NA	NA	False	NA	NA	NA	111681178	111688254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
transcript_189350.known	chrX	+	620	4	FSM	ENSG00000101901.12	ENST00000482742.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.8854278742681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	0	True	NA	-75	True	AATAAA	-39	NA	111681662	111688040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681827_111682131_111682295_111684964_111685104_111687886
transcript_189351.known	chrX	-	1559	4	FSM	ENSG00000182508.14	ENST00000371968.8	1559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTCTGCTAGATACT	-7	True	NA	NA	False	AATAAA	-26	NA	112679938	112630647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_112631602_112660626_112660726_112671008_112671405_112679828
transcript_189355.known	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	42	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	0	True	NA	3	True	AATAAA	-18	NA	114040387	114050858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_114040637_114042335_114042534_114050494
transcript_189356.known	chrX	+	503	3	FSM	ENSG00000288595.1	ENST00000674440.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	47.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAACTATTGCAGAA	72	False	NA	NA	False	NA	NA	NA	114040459	114055778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_114040637_114042335_114042534_114055650
transcript_189359.known	chrX	+	4743	6	FSM	ENSG00000147246.10	ENST00000276198.6	4743	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.48711915483254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATATGTCACATGTCTT	3	True	NA	9	True	ATTAAA	-15	NA	114584085	114910061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_114584660_114613814_114613882_114726857_114726972_114731293_114731608_114848002_114848204_114906588
transcript_18936.known	chr1	+	559	4	FSM	ENSG00000163041.13	ENST00000667897.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2707.92959041897	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGGTAGTTCTGAACG	42	False	NA	NA	False	NA	NA	NA	226062757	226071542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226062812_226064328_226064480_226065655_226065818_226071350
transcript_189360.known	chrX	+	4652	6	FSM	ENSG00000147246.10	ENST00000371950.3	4652	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.93938769133981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATATGTCACATGTCTT	-1	True	NA	9	True	ATTAAA	-15	NA	114584081	114910061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_114584660_114613814_114613882_114726857_114726972_114731293_114731608_114848002_114848109_114906588
transcript_189361.known	chrX	-	4953	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_17	6.60378679243962	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTGGTATTTCTTT	-2	True	NA	NA	False	GATAAA	-15	NA	115234096	115110615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
transcript_189363.known	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	1769	junction_8	166.852296624556	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	-9	True	NA	23	True	AGTAAA	-25	NA	115561173	115650861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
transcript_189372.known	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	-1	True	NA	NA	False	NA	NA	NA	115841009	115843050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_115841079_115842839
transcript_189373.known	chrX	+	444	3	FSM	ENSG00000229335.2	ENST00000451869.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTATGTGTTCTTAT	65	False	NA	NA	False	NA	NA	NA	115840963	115843048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_115841079_115842643_115842764_115842839
transcript_189374.known	chrX	-	3396	8	FSM	ENSG00000003096.14	ENST00000540167.5	3396	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	34.8483595491281	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCTGAGACATCCC	NA	False	NA	-20	True	AATAAA	-14	NA	118116865	117897813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118028423_118028498_118116507
transcript_189375.known	chrX	-	3322	7	FSM	ENSG00000003096.14	ENST00000545703.5	3322	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	7.16472842006823	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCTGAGACATCCC	NA	False	NA	-20	True	AATAAA	-14	NA	118116865	117897813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118116507
transcript_189376.known	chrX	+	4114	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_4	22.1414490788887	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	-19	True	NA	30	True	ATTAAA	-40	NA	118346105	118449961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_189378.known	chrX	+	4029	20	FSM	ENSG00000131725.14	ENST00000371825.7	4029	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	35.2925250849214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTCCAACACTTGTT	18	True	NA	6	True	ATTAAA	-16	NA	118346142	118449937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443583_118443688_118444359_118444495_118448892
transcript_189379.known	chrX	+	3996	11	FSM	ENSG00000131724.11	ENST00000371666.8	3996	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	15.577226967596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGTTTTCCTTTGGT	3	True	NA	9	True	AATAAA	-21	NA	118727605	118794533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118791761
transcript_189382.nnic	chrX	+	1592	11	NNC	ENSG00000131724.11	novel	3996	11	NA	NA	-71	10689	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	40.9	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCATTGTCTCAGTGT	6	False	NA	NA	False	ATTAAA	-16	NA	118727530	118805224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118804931
transcript_189383.known	chrX	+	2197	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.471404520791032	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTAATGTGTCTGTG	-1	True	NA	13	True	AATAAA	-15	NA	118823823	118826968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
transcript_189385.known	chrX	+	3108	11	FSM	ENSG00000175556.17	ENST00000371628.8	3108	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.42828568570857	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTTCCGTATCTATCCA	0	True	NA	NA	False	NA	NA	NA	118974617	119018355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118975598_118978344_118978464_118982820_118982944_118989407_118989673_118990469_118990561_119006120_119006236_119009125_119009248_119011814_119011974_119013038_119013202_119014206_119014357_119017534
transcript_189387.known	chrX	+	1762	2	FSM	ENSG00000101856.10	ENST00000535419.2	1762	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGTGGTGACTTATTTA	7277	False	NA	15	True	AATAAA	-17	NA	119236244	119244465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119236692_119243150
transcript_189388.known	chrX	+	1879	3	FSM	ENSG00000101856.10	ENST00000217971.8	1879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_1	55	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGACTTATTTAA	2	True	NA	16	True	AATAAA	-18	NA	119236284	119244466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119236692_119240308_119240465_119243150
transcript_189390.known	chrX	+	2507	5	FSM	ENSG00000077713.19	ENST00000217909.8	2507	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	4.54835134966506	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTGGTCATTTATT	-18	True	NA	NA	False	ATTAAA	-21	NA	119399335	119454478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119399679_119406459_119406702_119410189_119410363_119452008_119452144_119452864
transcript_189393.known	chrX	+	896	4	FSM	ENSG00000077713.19	ENST00000493093.5	896	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	20.2868320729373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGATGGTTTGGCCAT	55	False	NA	NA	False	NA	NA	NA	119399408	119453182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119399679_119410189_119410363_119452008_119452144_119452864
transcript_189399.known	chrX	+	1307	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	5365	junction_3	274.699027219893	2214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACATTTTTAATAAATG	0	True	NA	-32	True	AATAAA	-19	NA	119468443	119471396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
transcript_18940.known	chr1	+	607	4	FSM	ENSG00000163041.13	ENST00000666609.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	2830.0332546142	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTCTCTTCTTCC	639	False	NA	NA	False	NA	NA	NA	226063465	226071521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226063597_226064328_226064480_226065655_226065810_226071350
transcript_189401.known	chrX	-	1874	2	FSM	ENSG00000224281.5	ENST00000446986.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTACTATTTTTGCA	1531	False	NA	0	True	AATAAA	-13	NA	119468262	119466033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119467751_119468105
transcript_189405.nnic	chrX	-	1326	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6238090226619	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-10	True	ATTAAA	-17	NA	119565449	119538148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_119538495_119539509_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_189407.known	chrX	-	2301	7	FSM	ENSG00000018610.15	ENST00000644802.2	2301	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	5.20949986936259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	-20	True	NA	-10	True	ATTAAA	-17	NA	119565409	119538148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_189409.nnic	chrX	-	694	3	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTGTTAACCTTCTTG	NA	False	NA	-12	True	ATTAAA	-15	NA	119565449	119538150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_119538509_119560267_119560386_119565231
transcript_189410.known	chrX	+	1771	6	FSM	ENSG00000077721.16	ENST00000630695.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	239.921320436513	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGTATCTTTTTTTTT	-1	True	NA	19	True	AATAAA	-21	NA	119574562	119584425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119574756_119574907_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
transcript_189412.known	chrX	+	1381	5	FSM	ENSG00000077721.16	ENST00000625938.2	1381	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	142.536837343895	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGGAGCATAGCATA	9	False	NA	NA	False	AATAAA	-40	NA	119574545	119584101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119582587_119582677_119583126
transcript_189414.known	chrX	+	718	6	FSM	ENSG00000077721.16	ENST00000346330.6	718	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	201.087443665685	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATAACTGTTGT	-1	True	NA	-3	True	NA	NA	NA	119574535	119583347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119581506_119581597_119582596_119582677_119583126
transcript_189415.known	chrX	+	1435	6	FSM	ENSG00000077721.16	ENST00000631185.2	1435	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	225.542545875496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGAATTCCCATCTTG	-1	True	NA	NA	False	AATGAA	-17	NA	119574562	119591083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119590127
transcript_189416.known	chrX	-	3817	3	FSM	ENSG00000186416.18	ENST00000304449.8	3817	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCGTGCTCATTTCCG	17	False	NA	-1	True	AATAAA	-23	NA	119606443	119588336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119591310_119592382_119592514_119605730
transcript_189418.known	chrX	-	1617	11	FSM	ENSG00000125354.24	ENST00000489216.5	1617	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	53.7062379989513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACTAAGTCTAAAGGAGAA	25	False	NA	NA	False	NA	NA	NA	119693370	119616715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119616743_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_189421.known	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	28.5979020209525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	-5	True	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_189425.known	chrX	-	1576	10	FSM	ENSG00000125354.24	ENST00000354228.8	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	45.3945664883658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCTAAAGGAGAAGACT	25	False	NA	NA	False	NA	NA	NA	119693370	119616711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_189427.known	chrX	-	2693	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	48.6828993729628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTTTGATGTT	25	False	NA	NA	False	NA	NA	NA	119693370	119617638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_189428.known	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49.2832578689035	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	25	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_189434.known	chrX	+	1615	1	FSM	ENSG00000187808.5	ENST00000343905.5	1615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTCCTTTCAGTGT	-3	True	NA	13	True	ATTAAA	-27	NA	119758587	119760202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119758600_119760200
transcript_189435.nnic	chrX	-	721	3	NNC	ENSG00000198918.8	novel	390	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	171	junction_2	5727.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	303	False	NA	-10	True	AATAAA	-23	NA	119791576	119786503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_119786733_119789907_119790012_119791188
transcript_189436.known	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	10123	junction_2	751.5	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	-1	True	NA	-10	True	AATAAA	-23	NA	119791630	119786503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119786733_119789907_119790012_119791573
transcript_189437.known	chrX	-	405	2	FSM	ENSG00000198918.8	ENST00000477403.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	4423	False	NA	-10	True	AATAAA	-23	NA	119787456	119786503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119786733_119787280
transcript_189438.known	chrX	-	2335	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	34.4978081250403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTAAGTGTGTTTATT	-12	True	NA	-9	True	AATAAA	-20	NA	119852998	119834025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_18944.known	chr1	-	3584	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_5	38.3011695883655	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGATGTTTCATTAAT	-24	True	NA	-4	True	ATTAAA	-15	NA	226186741	226144678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
transcript_189444.nic	chrX	-	947	8	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-37	4469	-37	-229	5prime_fragment	FALSE	canonical	3	216	junction_1	37.5412698077131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTGGACAAAAGAGAAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	119853035	119838494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_189445.nic	chrX	-	837	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-37	7127	-37	-2887	5prime_fragment	FALSE	canonical	3	230	junction_2	35.4326434551844	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGATATAGAAAAGCTA	NA	False	NA	15	True	NA	NA	NA	119853035	119841152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_189446.nic	chrX	-	786	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-37	7178	-37	-2938	5prime_fragment	FALSE	canonical	3	230	junction_2	35.4326434551844	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAGAAGAAGAGAGG	NA	False	NA	-36	True	AATAGA	-9	NA	119853035	119841203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_189448.nic	chrX	-	731	6	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-37	7709	-37	-3469	5prime_fragment	FALSE	canonical	3	230	junction_1	35.2499645389893	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTTGTCTTTATA	NA	False	NA	NA	False	AAAAAG	-37	NA	119853035	119841734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_189449.nic	chrX	-	673	5	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-37	9179	-37	-4939	5prime_fragment	FALSE	canonical	3	240	junction_1	30.4302481094059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAATTAATAGGTAAGT	NA	False	NA	NA	False	AATAGA	-10	NA	119853035	119843204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_189450.known	chrX	-	1259	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCCTGGATTAAAAGC	-18	True	NA	51	True	NA	NA	NA	119871733	119870474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119870500_119871700
transcript_189452.known	chrX	+	421	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	2679	junction_2	50	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	-26	True	NA	6	True	AATAAA	-17	NA	119871831	119876662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119872014_119873303_119873394_119876513
transcript_189453.known	chrX	-	1394	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	57.0831356444265	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATTGATATAACTTTA	6	True	NA	-22	True	AATAAA	-5	NA	119943604	119925069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
transcript_189454.nic	chrX	-	905	5	ISM	ENSG00000101882.10	ENST00000371410.5	5942	9	-30	13830	-30	-4377	5prime_fragment	FALSE	canonical	3	138	junction_2	4.06201920231798	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGATCGTCAGTTTTTTA	-18	True	NA	-9	True	AAAAAG	-16	NA	119943781	119934501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119934558_119936296_119936432_119936611_119936683_119938729_119938811_119943219
transcript_189455.nic	chrX	-	791	4	ISM	ENSG00000101882.10	ENST00000371410.5	5942	9	-30	15683	-30	-6230	5prime_fragment	FALSE	canonical	3	138	junction_1	3.85861230093008	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAGAAGTATTCTGAAGA	-18	True	NA	NA	False	AAGAAA	-42	NA	119943781	119936354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119936432_119936611_119936683_119938729_119938811_119943219
transcript_189456.nic	chrX	-	713	3	ISM	ENSG00000101882.10	ENST00000652253.1	1394	9	-177	11543	-30	-6488	5prime_fragment	FALSE	canonical	3	140	junction_2	3.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTTTTAAAAAAAGGGT	-18	True	NA	-1	True	AAGAAA	-28	NA	119943781	119936612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119936683_119938729_119938811_119943219
transcript_189457.known	chrX	+	412	3	FSM	ENSG00000186471.13	ENST00000371422.5	412	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTTTGAAGTCTGG	7	True	NA	NA	False	AATAAA	-15	NA	119896192	119903652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119896268_119903213_119903393_119903494
transcript_189458.known	chrX	+	1340	2	FSM	ENSG00000258545.7	ENST00000665317.1	1340	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGGGCTGAGTACTGG	219	False	NA	-46	True	NA	NA	NA	120143719	120146796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_120143901_120145637
transcript_189459.known	chrX	+	5211	2	FSM	ENSG00000177485.7	ENST00000326624.2	5211	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	31	False	NA	15	True	AATAAA	-16	NA	120250751	120258398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_120250978_120253413
transcript_189462.known	chrX	-	6535	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	88.5744743139918	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATAACCTCATTTTT	-3	True	NA	-2	True	AATAAA	-20	NA	120469296	120426147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_189464.known	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	75.3027223943464	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	12	False	NA	-3	True	AATAAA	-24	NA	120469306	120436493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_189467.known	chrX	-	2089	9	FSM	ENSG00000005893.16	ENST00000434600.6	2089	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	171.110892406065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTTGACATTTATACT	NA	False	NA	NA	False	AATATA	-10	NA	120469365	120427826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120428627_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_189468.known	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	47	junction_20	35.2707740204266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	7	True	NA	-10	True	AATAAA	-18	NA	120561453	120524611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
transcript_189471.known	chrX	-	5097	20	FSM	ENSG00000158290.19	ENST00000674137.11	5097	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	16	junction_6	41.8317431724056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCCTGTGTACGTG	6	True	NA	-71	True	NA	NA	NA	120560953	120524672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538117_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
transcript_189474.known	chrX	+	9577	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	21.3597752797168	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTGTCTTTACTT	-21	True	NA	NA	False	AATAAA	-19	NA	120604100	120621159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
transcript_189475.known	chrX	-	1636	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTGAGAAAAAAAACTGA	-7	True	NA	-19	True	ATTAAA	-18	NA	120630054	120625673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120627172_120629916
transcript_189479.nnic	chrX	+	845	5	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	36.9484438102608	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTATTTGTATCCTTA	NA	False	NA	25	True	AGTAAA	-27	NA	122222349	122248552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chrX_+_122222603_122227324_122227431_122229771_122229895_122230631_122230758_122248315
transcript_189480.nnic	chrX	+	791	5	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_4	32.7604945017623	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTATTTGTATCCTTA	NA	False	NA	25	True	AGTAAA	-27	NA	122222349	122248552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122248315
transcript_189491.nic	chrX	-	3830	30	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-11	12560	-11	755	5prime_fragment	FALSE	canonical	0	0	junction_9	63.8867904783288	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAACACTGTGCCATGT	NA	False	NA	NA	False	NA	NA	NA	123733067	123622757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_189497.nic	chrX	-	2789	23	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	2	17495	-2	-4180	5prime_fragment	FALSE	canonical	0	0	junction_2	71.6452030771561	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTTTGTTCTAGTAG	-12	True	NA	-1	True	AATAAA	-43	NA	123733054	123627692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_1895.known	chr1	-	1874	6	FSM	ENSG00000227372.12	ENST00000648270.1	1874	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.0301515149694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCACGCTATACTTAAAAA	1218	False	NA	-79	True	NA	NA	NA	3746147	3737205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3738222_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
transcript_189500.nic	chrX	-	1964	17	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-90	28736	-90	-15421	5prime_fragment	FALSE	canonical	3	274	junction_11	34.7409498107061	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCCTTTCAAGTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	123733146	123638933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_189503.nic	chrX	-	1030	10	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	0	57982	0	128	5prime_fragment	FALSE	canonical	3	274	junction_4	39.1492869241148	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAGAAAGTAGAGAA	-14	True	NA	20	True	AAGAAA	-9	NA	123733056	123668179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_189505.known	chrX	+	8558	7	FSM	ENSG00000101966.13	ENST00000371199.8	8558	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.02305952453618	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	34	True	NA	NA	False	AATAAA	-34	NA	123860052	123913972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123860294_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_18951.known	chr1	-	2998	15	FSM	ENSG00000183814.16	ENST00000681046.1	2998	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	19.0430500472493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-7	True	NA	-1	True	AATAAA	-18	NA	226309164	226231156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_189511.known	chrX	+	4281	34	FSM	ENSG00000101972.20	ENST00000371144.7	4281	34	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	74.3397136201122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAATCTGAAGAGGCAT	-7	True	NA	NA	False	TTTAAA	-17	NA	123961738	124100902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_189514.known	chrX	+	5991	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	59.3044893826555	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	-28	True	NA	NA	False	AATAAA	-22	NA	123961717	124102656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_189521.known	chrX	+	2089	17	FSM	ENSG00000101972.20	ENST00000455404.5	2089	17	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	64.1133944176254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCAAAGGAGAAGAAGAC	NA	False	NA	-37	True	AATAAA	-32	NA	123960518	124062907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123960867_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901
transcript_189525.known	chrX	+	296	3	FSM	ENSG00000101972.20	ENST00000458700.5	296	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATGTATCAAATATTT	-6	True	NA	NA	False	NA	NA	NA	123960863	124025915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123960943_124022530_124022672_124025839
transcript_189527.known	chrX	+	678	7	FSM	ENSG00000101972.20	ENST00000428941.5	678	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	91.8422560698505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAAATCCAGTTTTTG	8	True	NA	NA	False	NA	NA	NA	123962032	124045208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123962107_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163
transcript_189528.known	chrX	-	3345	2	FSM	ENSG00000198889.5	ENST00000371126.3	3345	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAATCCTGTTGTGTTT	10	True	NA	NA	False	AATAAA	-26	NA	126552814	126549382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_126551108_126551194
transcript_189529.known	chrX	-	3989	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_13	76.0264482488386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	-1	True	NA	NA	False	AATAAA	-18	NA	129523490	129446505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_189534.known	chrX	-	3948	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_12	117.696447211462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	4	True	NA	NA	False	AATAAA	-18	NA	129523485	129446505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_189538.nic	chrX	-	1382	10	ISM	ENSG00000102038.16	ENST00000371122.8	4099	25	-20	53272	-20	8278	5prime_fragment	FALSE	canonical	3	472	junction_5	54.4544208546678	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAAGATTTACTTGG	NA	False	NA	NA	False	TATAAA	-34	NA	129523520	129499776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_189539.known	chrX	+	5173	24	FSM	ENSG00000122126.18	ENST00000371113.9	5173	24	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	16.304057968438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGTGATTTTGGTGA	-14	True	NA	11	True	AATAAA	-19	NA	129540258	129592556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129584343_129584368_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
transcript_18954.known	chr1	-	2909	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	30.0797755877314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCATTTAATTCAA	-15	True	NA	7	True	AATAAA	-26	NA	226309172	226231148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
transcript_189540.known	chrX	+	5138	23	FSM	ENSG00000122126.18	ENST00000357121.5	5138	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	16.4548593641579	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATTTTGGTGAGGAAG	2	True	NA	16	True	AATAAA	-24	NA	129540274	129592561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
transcript_189544.known	chrX	-	3224	3	FSM	ENSG00000171388.12	ENST00000429967.3	3224	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTCAT	-1	True	NA	NA	False	AATAAA	-21	NA	129654956	129645258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129647918_129648620_129648793_129654563
transcript_189550.known	chrX	-	4571	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.6872395308647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCATTTCTTTAC	378	False	129843910	-19	True	AATACA	-21	NA	129843886	129803287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
transcript_189551.known	chrX	-	2473	10	FSM	ENSG00000188706.13	ENST00000371064.7	2473	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.486969771677	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACCAGTTCTTCCATT	804	False	NA	NA	False	NA	NA	NA	129843460	129805328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258
transcript_189565.known	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	22.582275874532	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	-9	True	NA	9	True	AATAAA	-17	NA	129906163	129929752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
transcript_189578.known	chrX	-	4145	9	FSM	ENSG00000102034.18	ENST00000335997.11	4145	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.21307488658818	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCATAAAGGTGCTGCA	-15	True	NA	51	True	ATTAAA	-7	NA	130110716	130064873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130067526_130069299_130069678_130071039_130071233_130071335_130071420_130072225_130072418_130074048_130074142_130074580_130074753_130081255_130081540_130110619
transcript_189580.known	chrX	-	2107	16	FSM	ENSG00000156709.15	ENST00000675240.1	2107	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	133.736058463428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGAAATAAATTCTGA	7555	False	NA	NA	False	NA	NA	NA	130165825	130129396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130129629_130129969_130130103_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_189582.known	chrX	-	2048	16	FSM	ENSG00000156709.15	ENST00000676436.1	2048	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	183.880685953329	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATTAAATTCTGTTCT	2	True	NA	NA	False	AATAAA	-11	NA	130165690	130129372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137180_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147871_130149468_130149569_130156460_130156604_130165550
transcript_189583.known	chrX	-	2154	16	FSM	ENSG00000156709.15	ENST00000675092.1	2154	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	133.975851887155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	-7	True	NA	NA	False	AATAAA	-22	NA	130165746	130129361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130129629_130129969_130130194_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_189584.known	chrX	-	1883	15	FSM	ENSG00000156709.15	ENST00000674997.1	1883	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	140.79542620702	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATTAAATTCTGTTCT	7724	False	NA	NA	False	AATAAA	-11	NA	130165656	130129372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130165550
transcript_189594.known	chrX	+	952	1	FSM	ENSG00000286650.1	ENST00000664768.1	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCAGTTTACAATGG	NA	False	NA	NA	False	ATTAAA	-19	NA	130165953	130166905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130166000_130166900
transcript_189595.known	chrX	+	945	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	18	True	NA	4	True	AATAAA	-15	NA	130171961	130184870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130172321_130184284
transcript_189596.known	chrX	-	4638	19	FSM	ENSG00000056277.16	ENST00000370978.9	4638	19	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_7	18.773503787105	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAACTATAGGAGCAT	0	True	NA	33	True	AATAAA	-20	NA	130268899	130202706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
transcript_189603.known	chrX	+	1403	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	21.6076118275225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTGTCTTCATTTA	-20	True	NA	12	True	ATTAAA	-21	NA	130339887	130373361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_189609.known	chrX	+	1615	11	FSM	ENSG00000102078.16	ENST00000545805.6	1615	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32.2411228092323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	11	True	NA	8	True	ATTAAA	-17	NA	130339918	130373357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130339977_130340106_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_189610.known	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	33.38622470421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	-5	True	NA	14	True	CATAAA	-16	NA	130401986	130413656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
transcript_189611.nic	chrX	+	589	5	ISM	ENSG00000134597.17	ENST00000305536.11	1823	6	-63	2132	-63	0	5prime_fragment	FALSE	canonical	3	139	junction_1	15.6744218394172	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	NA	False	NA	2	True	AAAAAG	-10	NA	130401923	130411524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347
transcript_189613.known	chrX	+	798	3	FSM	ENSG00000134597.17	ENST00000370947.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	20	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGCTGGTAGGAGAGGG	13	True	NA	NA	False	NA	NA	NA	130402004	130404450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130402038_130402254_130402371_130403801
transcript_189614.known	chrX	+	729	4	FSM	ENSG00000134597.17	ENST00000469953.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	11.6714276000077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	9	True	NA	2	True	AAAAAG	-10	NA	130402000	130411524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130402371_130403801_130403854_130409256_130409387_130411347
transcript_189615.known	chrX	-	5215	16	FSM	ENSG00000165675.19	ENST00000338144.8	5215	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	16.2234398325386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	-7	True	NA	74	True	AATAAA	-21	NA	130903209	130622324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130709242_130709332_130783546_130783691_130901683_130901732_130903048
transcript_189616.known	chrX	-	5126	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	8.8456146173787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	-7	True	NA	74	True	AATAAA	-21	NA	130903209	130622324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_189617.known	chrX	-	3963	14	FSM	ENSG00000165675.19	ENST00000370935.5	3963	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_12	14.0796550522565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAACTCCTTACCAT	8	True	NA	NA	False	AATAAA	-7	NA	130903234	130623368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130901683_130901732_130903048
transcript_189622.known	chrX	-	1515	10	FSM	ENSG00000165675.19	ENST00000432489.5	1515	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	10.7909427041591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGATAATTCTGTTTTC	-2	True	NA	NA	False	AATAGA	-36	NA	130903204	130656580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_189627.known	chrX	-	4476	20	FSM	ENSG00000147255.19	ENST00000370903.8	4476	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	39.2578661595566	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGTGGTCTTCTAT	-16	True	NA	-2	True	AATAAA	-29	NA	131289306	131273505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279191_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_189629.known	chrX	-	4406	19	FSM	ENSG00000147255.19	ENST00000370910.5	4406	19	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_17	32.5208859764207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGTGGTCTTCTAT	12	True	NA	-2	True	AATAAA	-29	NA	131289278	131273505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286604_131286742_131289213
transcript_189632.known	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	15.5402702679201	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	4	True	NA	0	True	AATAAA	-14	NA	131289286	131284165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_189634.known	chrX	-	1786	5	FSM	ENSG00000147255.19	ENST00000370900.5	1786	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.3738727353048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	357	False	NA	0	True	AATAAA	-14	NA	131289060	131284165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289021
transcript_189638.known	chrX	-	1805	4	FSM	ENSG00000213468.7	ENST00000650184.1	1805	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	65.0589476295664	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAATATATGGGAACTT	-2	True	NA	NA	False	AATAAA	-28	NA	131830604	131795049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131796332_131804971_131805038_131825221_131825366_131830291
transcript_189639.nnic	chrX	-	1531	3	NIC	ENSG00000213468.7	novel	1805	4	NA	NA	-3	-280	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	93	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGGGAATGCTGATAA	NA	False	NA	NA	False	AAAAAG	-27	NA	131830676	131795329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_131796332_131825221_131825366_131830291
transcript_189640.known	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131825366_131830291
transcript_189645.known	chrX	+	3251	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	0	0	0	0	multi-exon	TRUE	canonical	3	415	junction_7	40.5067079436203	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	-1	True	NA	17	True	AATAAA	-19	NA	132023301	132075943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_189648.known	chrX	+	3179	11	FSM	ENSG00000134602.16	ENST00000354719.10	3179	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	147.975673676453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	-1	True	NA	17	True	AATAAA	-19	NA	132023301	132075943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072965_132073094_132074134
transcript_189650.known	chrX	+	3017	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	141.614264818203	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	2	True	NA	17	True	AATAAA	-19	NA	132023304	132075943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_189658.known	chrX	-	3896	4	FSM	ENSG00000123728.10	ENST00000342983.6	3896	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	31.7210060089875	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGTTTCTTTAATTATT	1493	False	NA	-13	True	AATAAA	-21	NA	132218124	132203024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_132205588_132214133_132214447_132216995_132217807_132217915
transcript_18967.known	chr1	-	3978	23	FSM	ENSG00000143799.14	ENST00000366794.10	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_17	275.455389287636	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-15	True	NA	-7	True	ATTAAA	-20	NA	226408093	226360690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_189677.known	chrX	-	4959	9	FSM	ENSG00000076716.9	ENST00000370828.4	4959	9	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_5	205.844867254445	872	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAATTTCTGCTTCCCCT	-1	True	NA	-7	True	AATAAA	-21	NA	133415489	133300102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
transcript_189694.known	chrX	-	2267	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_6	43.5819659389298	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	-7	True	NA	-28	True	AATAAA	-16	NA	133985594	133535744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
transcript_189700.known	chrX	+	1299	2	FSM	ENSG00000203952.9	ENST00000370809.4	1299	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTAAAAAAATCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	134237046	134245778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134237344_134244776
transcript_189706.known	chrX	+	4434	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	99.0668965901325	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTCTTTTTTGTG	-15	True	NA	18	True	AATAAA	-18	NA	134373311	134428791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
transcript_189707.known	chrX	+	4759	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	52.0536285662544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	-15	True	NA	16	True	AATAAA	-16	NA	134373311	134428789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
transcript_189709.known	chrX	+	1150	8	FSM	ENSG00000156531.18	ENST00000370800.4	1150	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	108.567293154325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTCTATGTAACTT	-7	True	NA	NA	False	AATAAA	-21	NA	134373372	134415292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015
transcript_189710.nic	chrX	+	706	6	ISM	ENSG00000156531.18	ENST00000691812.1	3892	11	-35	15212	2	-1736	5prime_fragment	FALSE	canonical	3	240	junction_5	64.5259637665336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCGCAAAGGAAGGCCAAGA	4	True	NA	NA	False	AGTAAA	-8	NA	134373291	134413556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490
transcript_189711.known	chrX	+	1395	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_7	27.1750689971525	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	7	True	NA	23	True	AATAAA	-16	NA	134460164	134500668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
transcript_189713.known	chrX	-	991	2	FSM	ENSG00000223749.11	ENST00000666697.1	991	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCTGCAGTGCAAATTG	4599	False	NA	NA	False	ATTAAA	-15	NA	134545044	134543339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134544000_134544713
transcript_189714.known	chrX	+	1567	3	FSM	ENSG00000227060.7	ENST00000671259.1	1567	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCCTGACTTATTT	8921	False	NA	NA	False	AATAAA	-22	NA	134549769	134560399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134550205_134558379_134558498_134559385
transcript_189715.known	chrX	-	1078	11	FSM	ENSG00000156504.17	ENST00000493333.5	1078	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	54.3975183257472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCAGAGAACTTTGATCC	3	True	NA	NA	False	CATAAA	-14	NA	134797187	134772078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_189716.known	chrX	-	1059	11	FSM	ENSG00000156504.17	ENST00000611027.2	1059	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	54.0133316876491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAAAATGTTTAGTGG	3	True	NA	NA	False	NA	NA	NA	134797187	134772100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_189722.known	chrX	-	4377	10	FSM	ENSG00000156504.17	ENST00000343004.10	4377	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	48.1663783151692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	-15	True	NA	-17	True	AATAAA	-25	NA	134797205	134769565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107
transcript_189723.nic	chrX	-	1545	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	-34	-63	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	50.841802573167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTCAAGTACATTATT	9	False	NA	-17	True	ATTAAA	-17	NA	134797266	134771636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_189725.known	chrX	-	4246	9	FSM	ENSG00000156504.17	ENST00000370790.5	4246	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	41.5314263540274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	-1	True	NA	-17	True	AATAAA	-25	NA	134797134	134769565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107
transcript_189726.known	chrX	-	1381	9	FSM	ENSG00000156504.17	ENST00000486347.5	1381	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	40.5924869895896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGGAAGAAATACGTAGT	7	True	NA	46	True	NA	NA	NA	134796274	134771573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107
transcript_189734.known	chrX	-	2348	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	44.7910705386687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	-9	True	NA	-23	True	AATAAA	-18	NA	134915257	134887631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_189735.known	chrX	-	773	5	FSM	ENSG00000101928.13	ENST00000370779.8	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	47.9133332173832	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAATTTGAAGGACT	-12	True	NA	97	True	AATATA	-12	NA	134915227	134889014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134889193_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_189736.known	chrX	-	574	2	FSM	ENSG00000101928.13	ENST00000462060.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTCTTGAAGCTGTT	10	True	NA	NA	False	NA	NA	NA	134915238	134899017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134899535_134915181
transcript_189737.known	chrX	+	1483	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGCATTTAGAATGAA	-10	True	NA	NA	False	ATTAAA	-21	NA	134990990	134992473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134991000_134992500
transcript_189738.known	chrX	-	2030	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAAGTTTTAGTCTT	-33	True	NA	-14	True	ATTAAA	-20	NA	135022542	135020512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135020500_135022500
transcript_189739.known	chrX	+	616	2	FSM	ENSG00000134590.14	ENST00000464369.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	26	False	NA	NA	False	AATAAA	-24	NA	135032381	135033546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135032576_135033124
transcript_189740.known	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	-1	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135032400_135033500
transcript_189741.known	chrX	-	536	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCTGATGGGTGCC	15	True	NA	NA	False	NA	NA	NA	135052141	135051057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135051369_135051916
transcript_189742.known	chrX	-	1204	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	21	True	NA	-68	True	AATAAA	-24	NA	135052135	135050931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135050900_135052100
transcript_189743.known	chrX	-	817	2	FSM	ENSG00000203950.7	ENST00000520964.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATGGAGTCTCAAT	-40	True	NA	-76	True	AATAAA	-16	NA	135052196	135050939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135051477_135051916
transcript_189746.known	chrX	-	2817	2	FSM	ENSG00000196972.9	ENST00000433425.4	2817	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTTCCGTGTCTG	-5	True	NA	NA	False	AATACA	-13	NA	135098712	135094984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135097122_135098032
transcript_189755.known	chrX	+	4034	5	FSM	ENSG00000173275.13	ENST00000339249.5	4034	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	7.95298686029343	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTAATATTCTTTGTTA	-1	True	NA	NA	False	AATATA	-28	NA	135344795	135363413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135344836_135347018_135347473_135349109_135349315_135359891_135360006_135360192
transcript_189761.nnic	chrX	+	1725	3	NNC	ENSG00000178947.9	novel	5230	2	NA	NA	4	-216	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGCCGTTGTGGATAA	-17	True	NA	11	True	TATAAA	-11	NA	135421947	135427859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_135422731_135423632_135423853_135427137
transcript_189762.nnic	chrX	+	1760	3	NNC	ENSG00000178947.9	novel	5230	2	NA	NA	10	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCGTTGTGGATAAAT	-11	True	NA	13	True	TATAAA	-13	NA	135421953	135427861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_135422731_135423632_135423892_135427137
transcript_189763.nnic	chrX	+	1807	3	NNC	ENSG00000178947.9	novel	5230	2	NA	NA	-27	-213	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	30	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCGTTGTGGATAAATG	NA	False	NA	14	True	TATAAA	-14	NA	135421916	135427862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_135422731_135423632_135423901_135427137
transcript_189764.known	chrX	+	5230	2	FSM	ENSG00000178947.9	ENST00000417443.3	5230	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTCAAGCAGGGTGC	-21	True	NA	16	True	ATTAAA	-19	NA	135421943	135428075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135422731_135423632
transcript_189767.known	chrX	+	3904	18	FSM	ENSG00000165359.16	ENST00000639893.2	3904	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	11.203373194456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCTGGATAAATTTCT	19	True	NA	16	True	AATAAA	-27	NA	135520659	135582510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135570435_135570547_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577428_135579787_135580163_135581049_135581144_135581527
transcript_189768.known	chrX	+	3793	17	FSM	ENSG00000165359.16	ENST00000370752.4	3793	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	13.4111660566857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTGGATAAATTTC	18	True	NA	15	True	AATAAA	-26	NA	135520658	135582509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577428_135579787_135580163_135581049_135581144_135581527
transcript_189772.known	chrX	+	4755	17	FSM	ENSG00000198689.13	ENST00000370701.6	4755	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	43.1204707766508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGTATTTGAGTCACA	NA	False	NA	23	True	ATTAAA	-26	NA	135985134	136047130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135985478_135985602_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_189776.known	chrX	+	4711	16	FSM	ENSG00000198689.13	ENST00000370695.8	4711	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	34.4140798059296	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTAACTTATGGGTTGG	-12	True	NA	NA	False	AATAAA	-18	NA	135985434	136047261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_189778.known	chrX	+	1888	5	FSM	ENSG00000198689.13	ENST00000675550.1	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	15.833114033569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTTTAAAGGATTAGT	189	False	NA	NA	False	NA	NA	NA	135985717	136000278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855
transcript_189779.known	chrX	-	5145	4	FSM	ENSG00000169446.6	ENST00000305963.3	5145	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	7.40870359029762	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTTTTTTTTTCA	19	True	NA	1	True	AATAAA	-21	NA	135973988	135960587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596
transcript_189781.known	chrX	+	2441	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	22.4276614920058	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTTTTCATTCTGC	15	False	NA	23	True	AATAAA	-21	NA	136147464	136211359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
transcript_189785.known	chrX	+	2178	6	FSM	ENSG00000022267.19	ENST00000618438.4	2178	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	70.11019897276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCCTGTCTTTTCAT	1	True	NA	18	True	AATAAA	-16	NA	136147535	136211354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136209870
transcript_189786.known	chrX	-	4385	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	17.3348468000224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTTTTTTCATTATAA	-13	True	NA	NA	False	AATAAA	-15	NA	136251400	136216813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_189788.nic	chrX	-	2229	13	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-49	9096	-49	-3517	5prime_fragment	FALSE	canonical	3	91	junction_2	18.5298183117554	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTCGCTCTCTGTTTGG	4972	False	NA	5	True	NA	NA	NA	136251449	136225909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_189790.nic	chrX	-	1939	11	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-49	11847	-49	1724	5prime_fragment	FALSE	canonical	3	103	junction_1	14.6017122283655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAGAAGAAAGACAACG	4972	False	NA	NA	False	NA	NA	NA	136251449	136228660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_189793.nic	chrX	-	381	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-67	25132	-49	-14374	5prime_fragment	FALSE	canonical	3	137	junction_2	7.31816613336672	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAGCTCCAATATGAAA	4972	False	NA	NA	False	AATAAA	-30	NA	136251449	136244758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_189795.known	chrX	+	3019	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	0	0	0	0	multi-exon	TRUE	canonical	3	292	junction_1	161.590551001101	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	147	False	NA	38	True	AATAAA	-27	NA	136497078	136512342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_189797.nic	chrX	+	2122	10	NIC	ENSG00000102241.12	novel	3019	10	NA	NA	-14	-717	combination_of_known_junctions	FALSE	canonical	3	166	junction_1	197.194645959422	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAGAGGAGGATACAT	-24	True	NA	18	True	NA	NA	NA	136497206	136511625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_189798.nic	chrX	+	2843	10	NIC	ENSG00000102241.12	novel	3019	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	166	junction_1	197.194645959422	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	-24	True	NA	42	True	AATAAA	-31	NA	136497206	136512346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_189800.known	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	82.7673697781922	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	-3	True	NA	42	True	AATAAA	-31	NA	136497591	136512346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_189804.known	chrX	+	1014	6	FSM	ENSG00000102241.12	ENST00000448450.5	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	214.990790500431	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTTTTTTCCCTT	-10	True	NA	NA	False	NA	NA	NA	136497220	136502941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_189807.known	chrX	+	885	6	FSM	ENSG00000102241.12	ENST00000425695.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	261.142566426847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGCCTCAAAGAAGAAG	3	True	NA	NA	False	NA	NA	NA	136497233	136502877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_189822.nic	chrX	-	3587	11	NIC	ENSG00000147274.14	novel	2012	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	858	junction_2	1173.8754661377	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTGTGGCAAGGGG	-3	True	NA	-14	True	AATAAA	-15	NA	136880781	136869191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_136870418_136872267_136872346_136873245_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_189832.nic	chrX	-	2380	10	NIC	ENSG00000147274.14	novel	4887	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	414	junction_2	1326.5698457132	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTGTGGCAAGGGG	-3	True	NA	-14	True	AATAAA	-15	NA	136880781	136869191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_136870418_136872267_136872346_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_189845.known	chrX	-	2012	9	FSM	ENSG00000147274.14	ENST00000320676.11	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	3712	junction_6	187.424609843531	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAGCTGCAAAGGTGC	2	True	NA	-36	True	AATAAA	-19	NA	136880725	136873460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_189849.known	chrX	-	2148	8	FSM	ENSG00000147274.14	ENST00000562646.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	3712	junction_5	199.157101355709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTCGCATTGCTTT	2	True	NA	-10	True	AGTAAA	-16	NA	136880725	136873957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_189859.known	chrX	-	563	2	FSM	ENSG00000147274.14	ENST00000565907.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	3724	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATTGTCTACACGATG	5	True	NA	NA	False	NA	NA	NA	136880722	136879016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136879454_136880596
transcript_189861.known	chrX	-	2041	3	FSM	ENSG00000147274.14	ENST00000496459.2	2041	3	0	0	0	0	multi-exon	FALSE	canonical	3	858	junction_2	207	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTGTGGCAAGGGG	6796	False	NA	-14	True	AATAAA	-15	NA	136873982	136869191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136870418_136872267_136872346_136873245
transcript_189872.known	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	41.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	-2	True	NA	-33	True	AATAAA	-31	NA	137566126	137572102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_137567752_137568901_137569066_137569890
transcript_189873.known	chrX	+	1968	3	FSM	ENSG00000156925.12	ENST00000370606.3	1968	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	206	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	-1	True	NA	13	True	AATAAA	-14	NA	137566517	137577691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_137567752_137568901_137569066_137577121
transcript_189877.known	chrX	-	19575	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	48.5148173241949	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGATCATTGGC	-20	True	NA	-1	True	AATAAA	-25	NA	138711717	138614726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
transcript_189883.known	chrX	+	849	3	FSM	ENSG00000226031.5	ENST00000438238.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	NA	False	NA	NA	False	AAAAAG	-28	NA	138712106	138716617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_138712143_138714723_138714810_138715890
transcript_189887.known	chrX	-	7019	30	FSM	ENSG00000101974.15	ENST00000682941.1	7019	30	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_14	23.5196176370515	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCAGCCTCTTTTTTTT	-23	True	NA	-3	True	AATAAA	-21	NA	139933053	139726347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_139728963_139731650_139731756_139737915_139738070_139740990_139741095_139743558_139743625_139745721_139745858_139750024_139750153_139757807_139757868_139761960_139762107_139763315_139763419_139768259_139768435_139774689_139774954_139782546_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
transcript_189893.nic	chrX	-	2078	18	ISM	ENSG00000101974.15	ENST00000682941.1	7019	30	818	56266	818	-57	5prime_fragment	FALSE	canonical	3	168	junction_2	24.4366280187618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAAGTTTTCGATGAT	795	False	NA	NA	False	AAGAAA	-4	NA	139932235	139782613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
transcript_189897.nic	chrX	-	1778	15	ISM	ENSG00000101974.15	ENST00000682941.1	7019	30	818	60832	818	-4623	5prime_fragment	FALSE	canonical	3	180	junction_1	23.6993283294128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAGTAAGTAGCTCTG	795	False	NA	NA	False	AAGAAA	-6	NA	139932235	139787179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
transcript_189899.known	chrX	+	1497	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-263	0	-263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACCTTATTTATT	NA	False	NA	4	True	AATAAA	-16	NA	140091414	140092911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_140091400_140092900
transcript_189900.known	chrX	-	2085	1	FSM	ENSG00000134595.9	ENST00000370536.5	2085	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGGAGTCCTGATAAT	-3	False	NA	-17	True	AATAAA	-13	NA	140505069	140502984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_140503000_140505100
transcript_189901.known	chrX	+	3997	4	FSM	ENSG00000203930.13	ENST00000648508.1	3997	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGATATTTTGAAGGA	-4	True	NA	NA	False	NA	NA	NA	140709758	140775904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_140709806_140711620_140711657_140733877_140733965_140772077
transcript_189902.known	chrX	+	1354	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	NA	False	NA	NA	False	AAGAAA	-24	NA	140764497	140773230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_140764699_140772077
transcript_189904.known	chrX	+	1429	3	FSM	ENSG00000203930.13	ENST00000370535.8	1429	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACCCAGCAACAAAAAC	4	True	NA	NA	False	AATAAA	-15	NA	140709766	140714848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_140709806_140711620_140711657_140713494
transcript_189905.known	chrX	+	466	2	FSM	ENSG00000227234.2	ENST00000449283.2	466	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	-4	True	NA	11	True	AATAAA	-15	NA	141002593	141003706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_141002784_141003430
transcript_189906.known	chrX	-	784	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	231	False	NA	-16	True	AATAAA	-19	NA	141177016	141175748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_141176409_141176892
transcript_189907.known	chrX	+	408	2	FSM	ENSG00000203926.5	ENST00000370518.4	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	-1	True	NA	NA	False	AATAAA	-15	NA	141589707	141590762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_141589840_141590486
transcript_189908.known	chrX	-	8736	2	FSM	ENSG00000179542.16	ENST00000356928.2	8736	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAGCCATTCAGTGT	2	True	NA	NA	False	AATAAA	-20	NA	143636101	143622789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_143631159_143635734
transcript_189909.known	chrX	-	3357	2	FSM	ENSG00000179542.16	ENST00000338017.8	3357	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	899	False	NA	NA	False	NA	NA	NA	143635204	143628127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_143631159_143634878
transcript_189913.nnic	chrX	+	3936	5	NNC	ENSG00000185985.11	novel	8421	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	6.29980158417708	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGAGTGAATTGAGCAA	-19	True	NA	12	True	AATAAA	-16	NA	145817816	145825842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_145818027_145820473_145820537_145821830_145821885_145822004_145822154_145822382
transcript_189928.nic	chrX	-	2169	10	NIC	ENSG00000010404.18	novel	7580	9	NA	NA	0	4588	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	64.9657079533237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGACCAGTTTTTTTTT	-37	False	NA	-12	True	ATTAAA	-14	NA	149505347	149482542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149502074_149502178_149503311_149503490_149504156_149504294_149505034
transcript_189930.known	chrX	-	7580	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	27.7083020049948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGTGTGCAATTCTT	4	True	NA	NA	False	AATAAA	-18	NA	149505306	149476987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_189939.known	chrX	-	1529	9	FSM	ENSG00000010404.18	ENST00000466323.5	1529	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	75.2694119480151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	-37	False	NA	0	True	AATAAA	-26	NA	149505347	149487130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149487314_149490313_149490441_149491537_149491668_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_189944.known	chrX	-	1399	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	51.6096020175332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	-37	False	NA	0	True	AATAAA	-26	NA	149505347	149487130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_189950.known	chrX	+	1524	6	FSM	ENSG00000197620.11	ENST00000434353.6	1524	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	33.5046265461951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAATAAATACTGTCCA	-31	True	NA	NA	False	NA	NA	NA	149540986	149549940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738_149546918_149549415
transcript_189952.known	chrX	+	1204	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	30.5122926047847	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	10	True	NA	NA	False	AATAAA	-15	NA	149540629	149547309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_189954.known	chrX	+	2407	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	37.1348892552543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTGCAGTGTTTCTGA	-6	True	NA	NA	False	ATTAAA	-42	NA	149541011	149548331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_189956.known	chrX	+	1208	5	FSM	ENSG00000197620.11	ENST00000423540.6	1208	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.6655566788406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTGTGTGATGCCTC	-35	True	NA	NA	False	NA	NA	NA	149540982	149547154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149541293_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_189959.known	chrX	-	1213	3	FSM	ENSG00000010404.18	ENST00000428056.6	1213	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGAAAAAAGTATTGGAA	30	True	NA	NA	False	NA	NA	NA	149505280	149502659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149503490_149504156_149504294_149505034
transcript_189964.nic	chrX	-	2689	8	NNC	ENSG00000269556.9	novel	2720	7	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	102.942028465004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631840	149596556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_149597183_149597260_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_189965.known	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	19.4050394371038	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	6	True	NA	NA	False	AATAAA	-17	NA	149631792	149596555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_189970.known	chrX	-	2662	6	FSM	ENSG00000269556.9	ENST00000611119.4	2662	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	100.266843971474	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631912	149596556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149631542
transcript_189976.known	chrX	-	2178	4	FSM	ENSG00000269556.9	ENST00000612022.1	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	113.420554672521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	17	True	NA	NA	False	AATAAA	-17	NA	149631719	149596555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149631542
transcript_189977.known	chrX	-	903	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	38	True	NA	-15	True	AATAAA	-16	NA	149631698	149603708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
transcript_18998.known	chr1	-	4918	22	FSM	ENSG00000143799.14	ENST00000679276.1	4918	22	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_16	274.589126166017	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCAAGGGCTAATAGTA	NA	False	NA	53	True	ATTAAA	-19	NA	226408154	226360742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_189980.nic	chrX	-	876	3	ISM	ENSG00000269556.9	ENST00000507237.5	903	4	-42	4625	-20	120	5prime_fragment	FALSE	canonical	3	298	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGTTTTCAAAAGTAAAA	-4	True	NA	NA	False	AATGAA	-26	NA	149631740	149608333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_149608835_149611286_149611464_149631542
transcript_189981.known	chrX	+	1902	5	FSM	ENSG00000185247.15	ENST00000355220.6	1902	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTTCTTATCCATA	-4	True	NA	NA	False	AATAAA	-17	NA	149712059	149717268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149712163_149713142_149713256_149714480_149714577_149715603_149715678_149715752
transcript_189988.nic	chrX	-	1613	6	NIC	ENSG00000197021.9	novel	1440	6	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	91.9325839950124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938557	149929526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_189989.known	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	74.9682599504617	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	34	True	NA	NA	False	AATAAA	-20	NA	149938435	149929526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_189992.known	chrX	-	1129	6	FSM	ENSG00000197021.9	ENST00000370409.7	1129	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	108.680449023732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCACCTGATCCCTTTG	-3	True	NA	NA	False	NA	NA	NA	149938472	149932578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938192
transcript_189998.nic	chrX	-	1627	5	NIC	ENSG00000197021.9	novel	1333	5	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	82.7749207187781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	NA	False	NA	NA	False	AATAAA	-11	NA	149938738	149932200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_189999.known	chrX	-	1316	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	92.7523584605804	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	10	True	NA	NA	False	AATAAA	-11	NA	149938459	149932200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_19.known	ERCC-00053	+	1007	1	FSM	ERCC-00053A	DQ516785	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00053_+_0_1000
transcript_190.known	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	FALSE	canonical	3	9392	junction_3	6562.61896762914	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
transcript_190000.known	chrX	+	3412	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	11.7822505732746	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	1	True	NA	11	True	AATAAA	-20	NA	150568620	150673143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
transcript_190002.known	chrX	-	3567	11	FSM	ENSG00000102181.21	ENST00000370377.8	3567	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	8.68101376568428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	-24	True	NA	-26	True	AATAAA	-16	NA	150898668	150766335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150831230_150831294_150898521
transcript_190003.known	chrX	-	988	9	FSM	ENSG00000102181.21	ENST00000466436.5	988	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	11.8842069571343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGCCAAGATGATGCTGA	15	True	NA	NA	False	NA	NA	NA	150898629	150768728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150831230_150831294_150898521
transcript_190010.known	chrX	+	3507	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_4	426.168027308478	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	13	True	NA	36	True	AATAAA	-26	NA	150983334	150990771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_190015.known	chrX	+	812	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1601.61346382328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	41	False	NA	13	True	AATAAA	-18	NA	150983405	150987932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_190020.known	chrX	+	4715	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	2	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	4	True	NA	18	True	ATTAAA	-20	NA	151397205	151409364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151397362_151403630_151403741_151404915
transcript_190021.known	chrX	+	482	2	FSM	ENSG00000214915.3	ENST00000454307.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGAACCTGTTGTAA	NA	False	NA	-17	True	NA	NA	NA	151515550	151516245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151515681_151515893
transcript_190022.known	chrX	+	1303	4	FSM	ENSG00000130032.17	ENST00000538575.5	1303	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTAGCACCCGGGCC	268	False	NA	NA	False	AATAAA	-19	NA	151695257	151701591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151695276_151698783_151698822_151699995_151700157_151700505
transcript_190025.known	chrX	-	3669	10	FSM	ENSG00000011677.13	ENST00000370314.9	3669	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	21.3807343762822	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTGCAGAACTTTCT	-7	True	NA	0	True	ATTAAA	-17	NA	152451315	152166233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152168564_152189729_152189942_152197632_152197786_152208000_152208145_152224762_152224846_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_190031.known	chrX	-	1947	5	FSM	ENSG00000268606.6	ENST00000620710.4	1947	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753884	152749862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753787
transcript_190032.known	chrX	-	1728	3	FSM	ENSG00000268606.6	ENST00000611674.4	1728	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152753884	152749863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152753787
transcript_190033.known	chrX	-	1413	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	1	190	junction_3	129.265231210871	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGAATTTATTTGC	-13	True	NA	2	True	NA	NA	NA	152830757	152826993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
transcript_190037.known	chrX	+	1630	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	120.596887915899	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTCTCTCTGTTTA	3220	False	NA	29	True	NA	NA	NA	152830966	152869363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_190041.known	chrX	+	1833	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_6	22.7434673284978	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCGTGCCTGCCTGCA	-1	True	NA	NA	False	NA	NA	NA	152831062	152869729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_190048.known	chrX	+	3191	9	FSM	ENSG00000147394.19	ENST00000454925.1	3191	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	24.2229230275786	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCAGTGTTAAAGTT	20	False	NA	14	True	AATAAA	-14	NA	152941700	152973472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152941831_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
transcript_190049.known	chrX	+	3158	3	FSM	ENSG00000183837.10	ENST00000424805.1	3158	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	5	True	NA	18	True	AATAAA	-18	NA	153056481	153060462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153056639_153056949_153058772_153059283
transcript_190050.known	chrX	+	3682	2	FSM	ENSG00000183837.10	ENST00000593810.3	3682	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	-7	True	NA	18	True	AATAAA	-18	NA	153056469	153060462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153056639_153056949
transcript_190051.known	chrX	+	2238	2	FSM	ENSG00000235961.6	ENST00000421798.5	2238	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	153072453	153075019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153072607_153072934
transcript_190052.known	chrX	+	6420	4	FSM	ENSG00000063587.15	ENST00000650114.2	6420	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCCTTGACGTCTT	-5	True	NA	14	True	AATAAA	-17	NA	153334152	153352926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153334286_153336633_153336711_153345519_153345622_153346818
transcript_190054.nic	chrX	-	1509	11	ISM	ENSG00000183479.13	ENST00000330912.7	2509	13	-15	3195	-15	-2948	5prime_fragment	FALSE	canonical	3	70	junction_3	177.330313257491	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	465	False	NA	-19	True	AAGAAA	-15	NA	153470602	153447667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_190058.known	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	33.8967204065672	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	-2	True	NA	-19	True	AAGAAA	-15	NA	153470576	153447667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_190068.known	chrX	+	2353	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	2.07019667802706	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	0	True	NA	12	True	ATTAAA	-19	NA	153494979	153509546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
transcript_190074.known	chrX	-	1253	5	FSM	ENSG00000262919.8	ENST00000576892.8	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	33.007574888198	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGACCCTTGGCTTTGCT	-6	True	NA	-5	True	AATAAA	-17	NA	153599139	153587924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153588455_153592505_153592734_153594546_153594680_153596003_153596188_153598961
transcript_190075.known	chrX	-	1164	5	FSM	ENSG00000262919.8	ENST00000440428.5	1164	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	47.0710898535396	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAATAGGGACCCTTGG	65	False	NA	-12	True	AATAAA	-10	NA	153599117	153587931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153588395_153592505_153592734_153594546_153594680_153596003_153596188_153598961
transcript_190076.known	chrX	+	554	1	FSM	ENSG00000260081.2	ENST00000562749.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTATTTACCATCTCA	NA	False	NA	18	True	AATAAA	-30	NA	153599339	153599893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153599300_153599900
transcript_190077.known	chrX	+	2289	4	FSM	ENSG00000130829.18	ENST00000370167.8	2289	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.43650214343336	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAGAGAAGCTACCTC	62	False	NA	12	True	AATAAA	-21	NA	153642533	153651326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153642612_153647918_153648327_153649231_153649688_153649979
transcript_190078.known	chrX	+	2434	4	FSM	ENSG00000130829.18	ENST00000342782.4	2434	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.09120616516523	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAGAGAAGCTACCTC	15	True	NA	12	True	AATAAA	-21	NA	153647202	153651326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153647426_153647918_153648327_153649231_153649688_153649979
transcript_190080.known	chrX	+	3931	13	FSM	ENSG00000130821.17	ENST00000253122.10	3931	13	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	40.6764844706237	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTCCTGCTTCCGCCT	-2	True	NA	NA	False	AATAAA	-19	NA	153687925	153696588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153688837_153690374_153690507_153691303_153691554_153691974_153692108_153693040_153693176_153693262_153693367_153693461_153693587_153693904_153694018_153694129_153694268_153694343_153694447_153694532_153694634_153694718_153694890_153695073
transcript_190082.known	chrX	+	1892	13	FSM	ENSG00000130821.17	ENST00000430077.6	1892	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.694526081123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGGAGGGGAGAAAGCA	51	False	NA	-52	True	NA	NA	NA	153689466	153695327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153689600_153690374_153690507_153691303_153691554_153691974_153692108_153693040_153693176_153693262_153693367_153693461_153693587_153693904_153694018_153694129_153694268_153694343_153694447_153694532_153694634_153694718_153694890_153695073
transcript_190085.known	chrX	-	1612	12	FSM	ENSG00000130822.16	ENST00000370150.5	1612	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.3771841273644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	662	False	NA	-6	True	AATAAA	-15	NA	153673693	153669732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153670127_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673516
transcript_190086.known	chrX	-	1473	12	FSM	ENSG00000130822.16	ENST00000340888.8	1473	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	6.94131242502585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	3	True	NA	-6	True	AATAAA	-15	NA	153673813	153669732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673779
transcript_190087.known	chrX	-	1585	12	FSM	ENSG00000130822.16	ENST00000447676.6	1585	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	9.28786642937534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTGTGGCGCATGGCG	-6	True	NA	NA	False	GGGGCT	-24	NA	153674361	153670019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673928
transcript_190106.known	chrX	-	1789	8	FSM	ENSG00000185825.17	ENST00000458587.8	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	1011.96462792099	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	-1	True	NA	-16	True	AATAAA	-23	NA	153724066	153700491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507
transcript_190110.known	chrX	-	1284	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_3	189.846447081287	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	5	True	NA	-16	True	AATAAA	-23	NA	153724387	153700491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_190116.known	chrX	-	573	4	FSM	ENSG00000185825.17	ENST00000645802.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	2875	junction_3	146.244847962434	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCCTGTCTGTGTTAG	-4	True	NA	NA	False	NA	NA	NA	153724396	153715416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153715690_153720871_153720973_153723152_153723289_153724333
transcript_190118.known	chrX	-	1350	8	FSM	ENSG00000185825.17	ENST00000672675.1	1350	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1031.21972559149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGTGCGGTGTGTGA	4	True	NA	-24	True	AATAAA	-15	NA	153724388	153700499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724260
transcript_190124.known	chrX	+	3669	10	FSM	ENSG00000101986.12	ENST00000218104.6	3669	10	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_7	3.09120616516523	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTCAGAGCCTGGT	0	True	NA	16	True	AGTAAA	-29	NA	153724855	153744755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153726167_153729231_153729413_153736111_153736255_153736344_153736514_153737156_153737252_153740091_153740238_153740573_153740720_153742986_153743072_153743220_153743347_153743488
transcript_190127.known	chrX	+	1016	2	FSM	ENSG00000101986.12	ENST00000370129.4	1016	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTTGTTTTTGTTTGT	580	False	NA	3	True	ATTAAA	-17	NA	153725816	153729897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153726167_153729231
transcript_190129.known	chrX	-	1335	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	28.7560380132977	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGCGTGGGCCTCCCT	0	True	NA	-37	True	AATAAA	-15	NA	153794375	153785767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_190131.known	chrX	-	1712	12	FSM	ENSG00000067829.20	ENST00000370092.7	1712	12	0	0	0	0	multi-exon	TRUE	canonical	3	258	junction_5	28.9915918275319	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	0	True	NA	-35	True	AATAAA	-17	NA	153794512	153785765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_190139.known	chrX	+	608	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_5	120.741707789811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	11	True	NA	47	True	AATAAA	-28	NA	153794667	153798499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_190141.known	chrX	+	701	5	FSM	ENSG00000180879.14	ENST00000485612.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_4	126.52149026944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGGGGCTGCTGGCTTG	1595	False	NA	45	True	AATAAA	-26	NA	153796251	153798497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_190142.known	chrX	+	2482	4	FSM	ENSG00000180879.14	ENST00000460616.5	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	1858	junction_3	109.393276250823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	2	True	NA	41	True	AATAAA	-22	NA	153794658	153798493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070
transcript_190149.nic	chrX	-	3565	8	NIC	ENSG00000067840.13	novel	3761	8	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	11.5387545750335	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	667	False	NA	-5	True	AATAAA	-27	NA	153830236	153802165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808341_153808596_153830126
transcript_190151.known	chrX	-	3418	6	FSM	ENSG00000067840.13	ENST00000544474.5	3418	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	12.7436258576592	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGCCTCCCTGTGTT	-6	True	NA	-7	True	AATAAA	-25	NA	153830548	153802167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153830238
transcript_190155.known	chrX	-	3761	8	FSM	ENSG00000067840.13	ENST00000393758.7	3761	8	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_6	6.1842459491181	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	-2	True	NA	-5	True	AATAAA	-27	NA	153830544	153802165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808341_153808596_153830238
transcript_190161.known	chrX	-	4655	27	FSM	ENSG00000198910.14	ENST00000370055.5	4655	27	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_26	11.0568728793372	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACTGCCCACTGGCCGG	7	True	NA	NA	False	NA	NA	NA	153886154	153861952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153862895_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153875760_153875945_153886064
transcript_190166.known	chrX	-	3372	23	FSM	ENSG00000089820.16	ENST00000370028.7	3372	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	33.12859991354	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCCAGCTCTCTGTCT	24	True	NA	-3	True	CATAAA	-22	NA	153926260	153907375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153919566_153919687_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_190173.known	chrX	-	3254	22	FSM	ENSG00000089820.16	ENST00000350060.10	3254	22	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_14	16.9506419653814	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	20	True	NA	-5	True	CATAAA	-20	NA	153926264	153907377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_190191.nic	chrX	-	3406	21	NIC	ENSG00000089820.16	novel	3254	22	NA	NA	-24	0	intron_retention	FALSE	canonical	3	79	junction_13	17.3438749995496	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	8931	False	NA	-5	True	CATAAA	-20	NA	153926329	153907377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_190193.nic	chrX	-	3417	21	NIC	ENSG00000089820.16	novel	3254	22	NA	NA	-21	0	intron_retention	FALSE	canonical	3	79	junction_13	17.0213836100359	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	8934	False	NA	-5	True	CATAAA	-20	NA	153926326	153907377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_1902.known	chr1	-	3525	5	FSM	ENSG00000227372.12	ENST00000423764.6	3525	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	37.2583883172635	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGCTGAAAGCACTC	-8	True	NA	-22	True	TTTAAA	-19	NA	3747373	3737148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
transcript_190234.known	chrX	-	1603	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_3	25.7206341369758	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTCTGTGTTGTA	9742	False	153935065	-11	True	NA	NA	NA	153935037	153929224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_190238.known	chrX	-	1080	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	19.3792558049982	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTTTGTGTGTGAGCG	-7	True	NA	-30	True	AATAAA	-18	NA	153935015	153929925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_190239.known	chrX	-	538	7	FSM	ENSG00000102030.16	ENST00000370011.7	538	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	242.198036509153	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGAAGGGCAGGCAC	-7	True	NA	NA	False	NA	NA	NA	153935015	153930204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153930224_153930762_153930848_153932315_153932432_153932538_153932585_153933960_153934002_153934376_153934476_153934883
transcript_190243.nic	chrX	-	1652	5	ISM	ENSG00000089820.16	ENST00000350060.10	3254	22	-65	12404	-24	630	5prime_fragment	FALSE	canonical	3	93	junction_1	8.26135582092915	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGCCAGTTTTAGAAC	8931	False	NA	NA	False	AATAAA	-8	NA	153926329	153919781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_190244.known	chrX	-	625	5	FSM	ENSG00000089820.16	ENST00000442262.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	44.7904844805233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCACCACCGCTGGTG	6841	False	NA	NA	False	NA	NA	NA	153928419	153920707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153928326
transcript_190246.known	chrX	-	1062	5	FSM	ENSG00000102030.16	ENST00000477750.5	1062	5	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_4	16.8077363139716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGAGGTGTGGGTCCCTG	9699	False	NA	NA	False	NA	NA	NA	153935080	153931770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_190249.known	chrX	-	5004	26	FSM	ENSG00000198910.14	ENST00000361981.7	5004	26	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_12	10.3240302208004	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTTTTGTTATTTCGCG	395	False	NA	-3	True	AATAAA	-16	NA	153875944	153861513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153862895_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153875760
transcript_190250.known	chrX	-	5138	29	FSM	ENSG00000198910.14	ENST00000370060.7	5138	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.3541354184298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACCTTTTGTTATTTCG	-12	True	NA	-5	True	AATAAA	-14	NA	153886173	153861515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153862895_153863367_153863380_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153873227_153873243_153875760_153875945_153886064
transcript_190252.known	chrX	-	1304	11	FSM	ENSG00000102032.13	ENST00000423624.5	1304	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.41202365109392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGTCCGCTCCACCT	11	True	NA	-18	True	NA	NA	NA	153944626	153935285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_190254.nic	chrX	-	1436	6	ISM	ENSG00000102032.13	ENST00000423624.5	1304	11	-105	6945	-44	14	5prime_fragment	FALSE	canonical	0	0	junction_5	3.26190128606002	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTTGCTAGGCCCAA	8647	False	NA	NA	False	NA	NA	NA	153944731	153942230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_190256.known	chrX	-	424	4	FSM	ENSG00000102032.13	ENST00000464227.5	424	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGATCGTCCACTGGGTG	9146	False	NA	NA	False	NA	NA	NA	153944232	153943057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153943080_153943545_153943719_153943894_153943971_153944079
transcript_190258.nic	chrX	-	2195	3	ISM	ENSG00000102032.13	ENST00000475904.1	580	4	-67	-1383	-23	14	intron_retention	FALSE	canonical	3	8	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTTGCTAGGCCCAA	8668	False	NA	NA	False	NA	NA	NA	153944710	153942230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153943719_153943894_153943971_153944079
transcript_190261.known	chrX	-	1334	11	FSM	ENSG00000102032.13	ENST00000393700.8	1334	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.94368283772331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTGTGCGCGCGTC	-6	True	NA	-1	True	AATAAA	-17	NA	153944643	153935268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
transcript_190264.known	chrX	-	8876	26	FSM	ENSG00000172534.14	ENST00000310441.12	8876	26	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_19	73.1283802637526	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGGTGTCTCACTGTG	9	True	NA	-4	True	ATTAAA	-19	NA	153971818	153947556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952159_153952513_153952959_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
transcript_190265.known	chrX	-	8375	26	FSM	ENSG00000172534.14	ENST00000369984.4	8375	26	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	112.635454453738	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTAGGTGTCTCACTG	17	True	NA	-6	True	ATTAAA	-17	NA	153971184	153947558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952162_153952513_153953091_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
transcript_190271.nic	chrX	-	2637	6	ISM	ENSG00000172534.14	ENST00000310441.12	8876	26	-1	13231	-1	-779	5prime_fragment	FALSE	canonical	3	300	junction_2	19.7544931597852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTGAAGTTTAGATTT	8	True	NA	NA	False	AATAAA	-14	NA	153971819	153960787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
transcript_190272.known	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	12	True	NA	8	True	NA	NA	NA	153972753	153983194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153972861_153981849
transcript_190273.known	chrX	-	2049	14	FSM	ENSG00000184216.14	ENST00000393687.6	2049	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	47.9773121924009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCACCTGGGCAGATC	1278	False	NA	NA	False	AAGAAA	-21	NA	154019812	154011858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154011918_154012528_154012679_154013042_154013344_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
transcript_190274.known	chrX	-	3581	14	FSM	ENSG00000184216.14	ENST00000369980.8	3581	14	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_13	17.2067139778971	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTCTACTTGTGGA	-31	True	NA	-7	True	AATAAA	-15	NA	154019902	154010506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
transcript_190283.known	chrX	-	1712	5	FSM	ENSG00000169057.24	ENST00000628176.2	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	45.0194402452985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	1	True	NA	NA	False	AATAAA	-21	NA	154097737	154030238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154092183_154092308_154097603
transcript_190286.known	chrX	-	10467	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	23.5702260395516	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	-21	True	NA	-3	True	GATAAA	-18	NA	154097717	154021572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
transcript_190287.known	chrX	-	10343	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	42.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	-21	True	NA	-3	True	GATAAA	-18	NA	154097717	154021572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031451_154032206_154032558_154097603
transcript_190289.known	chrX	-	2558	1	FSM	ENSG00000169057.24	ENST00000629277.1	2558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATGAGTTTAATAGGC	215	False	NA	NA	False	NA	NA	NA	154097523	154094965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154095000_154097500
transcript_190290.known	chrX	-	8240	47	FSM	ENSG00000196924.19	ENST00000369856.8	8240	47	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_19	651.651737694357	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCGTGGCTGTAGCTT	-4	True	NA	-7	True	AATAAA	-17	NA	154371222	154348529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
transcript_190294.known	chrX	-	8278	46	FSM	ENSG00000196924.19	ENST00000360319.9	8278	46	0	0	0	0	multi-exon	TRUE	canonical	3	1149	junction_39	539.487722259864	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTGGCTGTAGCTTT	3920	False	NA	-6	True	AATAAA	-18	NA	154371283	154348528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
transcript_190328.known	chrX	+	680	2	FSM	ENSG00000285018.1	ENST00000644854.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCGTATGGGGAGGGGTG	2	True	NA	NA	False	NA	NA	NA	154374594	154376934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154374728_154376387
transcript_190330.known	chrX	+	1114	6	FSM	ENSG00000102119.12	ENST00000684633.1	1114	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	147.603522993186	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTTGGGGCTCCAGGA	70	False	NA	82	True	NA	NA	NA	154379508	154381574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379563_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_190331.known	chrX	+	798	6	FSM	ENSG00000102119.12	ENST00000684082.1	798	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	171.475246026941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGGGCAGGGGCAGG	46	False	NA	NA	False	NA	NA	NA	154379484	154381273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380276_154380368_154380752_154380803_154380881
transcript_190332.known	chrX	+	946	6	FSM	ENSG00000102119.12	ENST00000428228.5	946	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	168.476229777378	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGCAGGGGCTTTATGT	-21	True	NA	NA	False	NA	NA	NA	154379360	154381283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379538_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_190333.known	chrX	+	501	5	FSM	ENSG00000102119.12	ENST00000468294.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	38.7709620721488	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCCGGGACAGTGCCTA	86	False	NA	NA	False	NA	NA	NA	154379524	154380894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752
transcript_190335.known	chrX	+	1281	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	34.9606922128267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	70	False	NA	31	True	AATAAA	-19	NA	154379508	154381523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
transcript_190337.known	chrX	+	1284	4	FSM	ENSG00000102119.12	ENST00000486738.5	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	39.9694327649962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGGGCAGGGGCTTT	-41	True	NA	NA	False	NA	NA	NA	154379340	154381279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752
transcript_190339.known	chrX	+	765	3	FSM	ENSG00000102119.12	ENST00000494443.5	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	48.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGCCTCCGGGGAG	46	False	NA	NA	False	GATAAA	-29	NA	154379427	154380462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941
transcript_190340.known	chrX	+	1906	11	FSM	ENSG00000102125.16	ENST00000601016.6	1906	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	38.1928003686559	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGCCTCTCTGTAG	-25	True	NA	24	True	CATAAA	-26	NA	154411538	154421726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190344.known	chrX	+	1102	11	FSM	ENSG00000102125.16	ENST00000652390.1	1102	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	45.1380105897458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTTGGCTAGGGGAGC	161	False	NA	NA	False	GGGGCT	-34	NA	154411978	154421308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154412007_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190348.known	chrX	+	1230	10	FSM	ENSG00000102125.16	ENST00000612012.5	1230	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	37.4343870436439	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCAGGGAGGAAGAAGC	86	False	NA	NA	False	NA	NA	NA	154411649	154421203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190350.known	chrX	+	1790	10	FSM	ENSG00000102125.16	ENST00000612460.5	1790	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	36.7950613970119	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	-25	True	NA	-2	True	NA	NA	NA	154411538	154421700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190354.known	chrX	+	891	10	FSM	ENSG00000102125.16	ENST00000616020.5	891	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	46.4489630975709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTTGCTGCCTTCTG	26	False	NA	NA	False	NA	NA	NA	154411843	154421004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154412007_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190356.known	chrX	-	3008	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	16.1665712101038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	11	True	NA	NA	False	AATAAA	-26	NA	154412090	154401237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
transcript_190362.known	chrX	+	1485	9	FSM	ENSG00000102125.16	ENST00000613002.4	1485	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	34.7326845348873	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCACGTCTTCCTTCTGC	-23	True	NA	NA	False	NA	NA	NA	154411540	154421439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190371.known	chrX	+	1928	9	FSM	ENSG00000102125.16	ENST00000652685.1	1928	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	50.108476079402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	228	False	NA	-2	True	NA	NA	NA	154411791	154421700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413359_154413481_154413568_154419542_154419624_154419704_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190383.known	chrX	-	2249	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	16.7332005306815	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGGCTGTAAACTG	-11	True	NA	NA	False	AATAAA	-20	NA	154412112	154401760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
transcript_1904.known	chr1	-	3088	5	FSM	ENSG00000227372.12	ENST00000648600.1	3088	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	45.9802946924006	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAAGCACTCACATTT	481	False	NA	-16	True	TTTAAA	-25	NA	3746884	3737142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742958_3743060_3743191_3745606
transcript_190402.known	chrX	+	1937	8	FSM	ENSG00000102125.16	ENST00000615658.5	1937	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	46.1974467003605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACAGGCCCTTTCCTCA	21	True	NA	NA	False	NA	NA	NA	154411584	154421473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154412007_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190404.known	chrX	-	2666	8	FSM	ENSG00000013563.14	ENST00000369808.7	2666	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	23.229994684916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGCTGTAAACTGAGA	2823	False	NA	NA	False	AATAAA	-23	NA	154409278	154401757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154408557
transcript_190405.known	chrX	-	2610	8	FSM	ENSG00000013563.14	ENST00000369807.6	2610	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	8.83176086632785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	-1	True	NA	NA	False	AATAAA	-28	NA	154409254	154401235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111
transcript_190406.known	chrX	-	2665	8	FSM	ENSG00000013563.14	ENST00000393638.5	2665	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	23.5545394039156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	11	True	NA	NA	False	AATAAA	-26	NA	154412090	154401237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154411890
transcript_190407.known	chrX	+	2278	6	FSM	ENSG00000147403.18	ENST00000344746.8	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_5	487.896464426624	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAGTGTCCTATCTCA	-8	True	NA	NA	False	AATAAA	-23	NA	154398371	154402339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
transcript_19041.nic	chr1	-	908	5	ISM	ENSG00000143799.14	ENST00000676709.1	4764	22	-8	27950	-8	0	5prime_fragment	FALSE	canonical	3	2285	junction_1	123.689884388336	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAGGATAG	NA	False	NA	25	True	AAGAAA	-7	NA	226408162	226388697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_190413.known	chrX	+	2247	7	FSM	ENSG00000102125.16	ENST00000652476.1	2247	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	27.8293410310453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGCTTGTTGTAAAA	119	False	NA	4	True	CATAAA	-6	NA	154411682	154421706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413568_154419542_154420095_154420211_154420265_154420657_154420736_154420902
transcript_190434.known	chrX	-	1939	1	FSM	ENSG00000280195.1	ENST00000624054.1	1939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGGCTGGTGCCTGTA	2051	False	NA	NA	False	AATACA	-14	NA	154398816	154396877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154396900_154398800
transcript_190435.known	chrX	+	1731	2	FSM	ENSG00000147403.18	ENST00000482732.1	1731	2	0	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	8	True	NA	29	True	AATAAA	-17	NA	154398387	154400913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337
transcript_190436.known	chrX	+	585	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	7219.81210281819	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	-2	True	NA	33	True	AATAAA	-21	NA	154398377	154400917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
transcript_190437.known	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	18400	junction_4	223.408118697598	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	10	False	NA	29	True	AATAAA	-17	NA	154398496	154400913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
transcript_190438.known	chrX	+	1519	3	FSM	ENSG00000147403.18	ENST00000489200.5	1519	3	0	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	162.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCCTGTCCACCTAT	-3	True	NA	14	True	AATAAA	-2	NA	154398376	154400898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337_154399595_154399802
transcript_190439.known	chrX	+	1369	5	FSM	ENSG00000147403.18	ENST00000491035.5	1369	5	0	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_4	545.379225860318	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	-3	True	NA	29	True	AATAAA	-17	NA	154398376	154400913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154400627_154400701
transcript_190440.known	chrX	-	598	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	2	33	-2	multi-exon	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCTGGCACTTTGTT	-9	True	NA	-2	True	AATAAA	-21	NA	154428479	154424379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154424626_154428127
transcript_190442.known	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	2	430	junction_7	94.7652069297822	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	-2	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_190450.known	chrX	+	4515	10	FSM	ENSG00000071553.18	ENST00000455205.5	4515	10	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	198.339775805729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGGGCCTCTTGTCGCTC	19	False	NA	15	True	AATAAA	-20	NA	154428697	154436515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154428854_154429047_154431658_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_19046.known	chr1	-	6269	8	FSM	ENSG00000143772.11	ENST00000429204.6	6269	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	5.3642809587196	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGTCTGTGGTGTGATC	22	True	NA	-2	True	AATAAA	-14	NA	226739282	226631689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226634887_226637678_226637751_226639556_226639659_226641920_226642126_226647166_226647381_226648671_226648772_226735526_226737664_226739040
transcript_190465.known	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_5	92.9908059971522	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	-6	True	NA	23	True	AATAAA	-17	NA	154437153	154443467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_190470.nic	chrX	+	2754	10	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	-38	0	intron_retention	FALSE	canonical	3	872	junction_5	68.2999918659504	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	1138	False	NA	23	True	AATAAA	-17	NA	154436874	154443467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_190475.nic	chrX	+	3343	9	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	-38	0	intron_retention	FALSE	canonical	3	889	junction_4	54.8051947811519	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	1138	False	NA	23	True	AATAAA	-17	NA	154436874	154443467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_190483.known	chrX	+	1014	5	FSM	ENSG00000203879.12	ENST00000481304.5	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_4	68.7259048685428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGTGAGGACATGGGT	1	True	NA	NA	False	NA	NA	NA	154437188	154440500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940
transcript_190488.known	chrX	+	1337	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_5	49.5991571388959	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	2	True	NA	54	True	NA	NA	NA	154444140	154450654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_190489.nic	chrX	+	1675	13	NIC	ENSG00000071859.15	novel	1240	11	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	117.741949477094	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	196	False	NA	54	True	NA	NA	NA	154444365	154450654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_154444910_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_190490.known	chrX	+	1470	12	FSM	ENSG00000071859.15	ENST00000464419.5	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_5	51.8038257625473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	16	True	NA	54	True	NA	NA	NA	154444154	154450654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449932_154450028_154450100_154450208_154450320_154450423
transcript_190493.known	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1749	junction_1	95.5	848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	15	True	NA	-16	True	AATAAA	-19	NA	154479257	154477768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154478059_154478282_154478412_154478727
transcript_190495.known	chrX	-	2327	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	29.6348143611905	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	-9	True	NA	-4	True	AATAAA	-22	NA	154486615	154483716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
transcript_190497.nic	chrX	-	2617	3	NIC	ENSG00000102178.13	novel	2327	4	NA	NA	-42	0	intron_retention	FALSE	canonical	3	344	junction_1	22	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	3	True	NA	-4	True	AATAAA	-22	NA	154486657	154483716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_154485650_154485770_154486334_154486536
transcript_190499.known	chrX	-	1763	4	FSM	ENSG00000126903.16	ENST00000369649.8	1763	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	38.3231870630127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTCTACTCTTTGCC	45	False	NA	0	True	AATAAA	-18	NA	154490614	154487305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154488497_154488583_154489083_154490306_154490359_154490593
transcript_1905.nic	chr1	-	3590	5	ISM	ENSG00000227372.12	ENST00000636630.1	2529	6	-366	-445	-16	0	intron_retention	FALSE	canonical	3	50	junction_3	48.0052080507938	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGCTGAAAGCACTC	-24	True	NA	-22	True	TTTAAA	-19	NA	3747389	3737148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3738514_3740232_3740388_3742803_3742961_3743060_3743191_3745606
transcript_190505.known	chrX	-	1862	3	FSM	ENSG00000126903.16	ENST00000393587.4	1862	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	42.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATATATTTCAATAAA	-4	True	NA	-37	True	NA	NA	NA	154490663	154487342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154489083_154490306_154490359_154490593
transcript_190506.nnic	chrX	-	2017	3	NNC	ENSG00000126903.16	novel	2095	2	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	44	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGTCCCTTCTACTCT	NA	False	NA	-5	True	AATAAA	-13	NA	154490688	154487310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_154489083_154490306_154490383_154490519
transcript_190508.nnic	chrX	-	1877	2	NIC	ENSG00000126903.16	novel	1893	3	NA	NA	-8	0	intron_retention	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGTCCCTTCTACTCT	NA	False	NA	-5	True	AATAAA	-13	NA	154490698	154487310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_154489083_154490593
transcript_19051.known	chr1	+	1947	13	FSM	ENSG00000143801.18	ENST00000422240.6	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	29.1328375243851	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGGTTTATCCAG	10	True	NA	95	True	NA	NA	NA	226870619	226895803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
transcript_190510.known	chrX	-	1815	11	FSM	ENSG00000071889.17	ENST00000322269.10	1815	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	23.546761985462	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	-16	True	NA	-2	True	AATAAA	-29	NA	154516242	154506159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
transcript_190517.known	chrX	-	1901	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	23.6429197503394	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-16	True	NA	-13	True	AATAAA	-18	NA	154516242	154506170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_190519.known	chrX	-	1712	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_9	15.2663593693802	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	-10	True	NA	-1	True	AATAAA	-30	NA	154516236	154506158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_19052.known	chr1	+	2193	12	FSM	ENSG00000143801.18	ENST00000678320.1	2193	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	41.8709153675795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	NA	False	NA	4	True	AATAAA	-8	NA	226870560	226896086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_190520.known	chrX	-	1521	10	FSM	ENSG00000071889.17	ENST00000369643.5	1521	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	24.6431319157546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	23	True	NA	-13	True	AATAAA	-18	NA	154516116	154506170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515968
transcript_190529.nic	chrX	-	1951	10	NIC	ENSG00000071889.17	novel	1901	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	10	junction_4	28.2095334555143	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	7747	False	NA	-13	True	AATAAA	-18	NA	154516271	154506170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_190530.known	chrX	-	1359	10	FSM	ENSG00000071889.17	ENST00000369641.7	1359	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	22.878638481462	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCCATTCCTCACGCC	-12	True	NA	NA	False	NA	NA	NA	154516238	154506534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_19054.known	chr1	+	2144	12	FSM	ENSG00000143801.18	ENST00000677414.1	2144	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	39.5781474056848	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTAGAATCTTGGAGTT	NA	False	NA	6	True	AATAAA	-10	NA	226870567	226896088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226870650_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_190541.known	chrX	-	1793	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	11.3571288184999	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-6	True	NA	-13	True	AATAAA	-18	NA	154516232	154506170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_190542.known	chrX	-	1041	9	FSM	ENSG00000071889.17	ENST00000393572.5	1041	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	25.7921378524542	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGGGGCTGCAGGGGG	-21	True	NA	NA	False	GGGGCT	-40	NA	154516160	154506639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154515759_154515813_154515909
transcript_190546.nic	chrX	-	1853	9	ISM	ENSG00000071889.17	ENST00000369641.7	1359	10	-33	-364	-29	0	intron_retention	FALSE	canonical	3	10	junction_4	22.072324299901	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	7747	False	NA	-13	True	AATAAA	-18	NA	154516271	154506170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_190551.known	chrX	-	1817	9	FSM	ENSG00000071889.17	ENST00000434658.6	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	29.0817812384317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACCCCTTAATAAAGTGA	-16	True	NA	-46	True	NA	NA	NA	154516242	154506203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_19056.known	chr1	+	2465	13	FSM	ENSG00000143801.18	ENST00000366782.6	2465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	50.436153258903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGAGTTTGGTCCGTTG	658	False	NA	16	True	AATAAA	-20	NA	226871267	226896098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226871405_226875364_226875551_226880468_226880725_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_190562.known	chrX	-	1763	8	FSM	ENSG00000071889.17	ENST00000419205.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	22.5759489144478	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	-16	True	NA	-2	True	AATAAA	-29	NA	154516242	154506159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_19057.known	chr1	+	2690	12	FSM	ENSG00000143801.18	ENST00000676467.1	2690	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	45.7082013365379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	157	False	NA	4	True	AATAAA	-8	NA	226870766	226896086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226871405_226875364_226875551_226881887_226882049_226883709_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
transcript_190578.known	chrX	-	1661	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	17.4186601729933	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	-4	True	NA	NA	False	NA	NA	NA	154547572	154531999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
transcript_190579.known	chrX	-	1799	13	FSM	ENSG00000160211.19	ENST00000369620.6	1799	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	24.9482798338215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	-4	True	NA	NA	False	NA	NA	NA	154547572	154531999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533808_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
transcript_190590.known	chrX	+	1949	10	FSM	ENSG00000269335.7	ENST00000617207.4	1949	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	44.6592033565809	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCATTAGTCGTGC	13	True	NA	NA	False	AGTAAA	-3	NA	154547640	154565033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558534_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
transcript_190611.known	chrX	-	2223	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	9.24061085041941	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCCCCTTGTCATT	-1	True	NA	-7	True	ATTAAA	-14	NA	154546846	154531390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
transcript_190612.known	chrX	-	4745	10	FSM	ENSG00000160219.12	ENST00000424127.3	4745	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.36986977843755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGACTTAAGTTCTTTTT	-8	True	NA	3	True	AATAAA	-18	NA	154751077	154675248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154678295_154680131_154680249_154695916_154696020_154697131_154697214_154699293_154699514_154700003_154700060_154712228_154712702_154713206_154713427_154716025_154716330_154750953
transcript_190615.known	chrX	+	2469	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_6	67.3960651064788	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTATGTTTGTTTTCT	10	True	NA	25	True	ATTAAA	-36	NA	154762863	154777689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
transcript_190618.nic	chrX	+	1659	14	ISM	ENSG00000130826.18	ENST00000369550.10	2469	15	-145	1429	-23	0	5prime_fragment	FALSE	canonical	3	944	junction_6	69.558370192992	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGTAAGAAGGACAAGA	NA	False	NA	31	True	NA	NA	NA	154762718	154776260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186
transcript_190619.nic	chrX	+	1723	14	ISM	ENSG00000130826.18	ENST00000369550.10	2469	15	-145	1365	-23	52	5prime_fragment	FALSE	canonical	3	944	junction_6	69.558370192992	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGGAAACACGTTCAG	NA	False	NA	95	True	NA	NA	NA	154762718	154776324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186
transcript_190632.known	chrX	+	3079	14	FSM	ENSG00000130826.18	ENST00000620277.4	3079	14	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_6	67.3630102350615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	2	True	NA	24	True	ATTAAA	-35	NA	154762741	154777688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154775274_154776186_154776325_154776798
transcript_190634.known	chrX	-	2195	13	FSM	ENSG00000130830.15	ENST00000413259.7	2195	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	25.1490004219297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACCTTGTAACTCTGGG	111	False	NA	-2	True	AATAAA	-20	NA	154805527	154778685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154799744_154799894_154805271
transcript_190635.known	chrX	-	1389	12	FSM	ENSG00000130830.15	ENST00000393531.5	1389	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	20.7376369622206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCCCCTCTCCAGCATT	-4	True	NA	NA	False	NA	NA	NA	154805397	154779152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786341_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_190636.known	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	7.10022697809696	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	-26	True	NA	0	True	AATAAA	-22	NA	154805485	154778683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_190637.nic	chrX	-	2338	12	NIC	ENSG00000130830.15	novel	2006	12	NA	NA	-512	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	18.0861117440021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154821519	154778683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154820973
transcript_190642.known	chrX	-	2620	5	FSM	ENSG00000185010.15	ENST00000330287.10	2620	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	4.60298815988049	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTGAGAATTGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	154886317	154835787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154837753_154860431_154860609_154861717_154861867_154863082_154863228_154886133
transcript_190643.known	chrX	+	666	5	FSM	ENSG00000165775.18	ENST00000484175.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	169.374400367942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTTCATTGTTCCTG	111	False	NA	NA	False	NA	NA	NA	155027152	155054681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155027373_155033402_155033554_155046508_155046585_155051669_155051802_155054594
transcript_190644.known	chrX	+	871	5	FSM	ENSG00000165775.18	ENST00000456179.1	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	195.557376490891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGGTATCTTGGT	6384	False	NA	NA	False	AATACA	-17	NA	155033425	155055106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155033554_155046508_155046585_155047368_155047392_155051669_155051802_155054594
transcript_190646.known	chrX	+	2846	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_7	98.0178765951977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	-3	True	NA	10	True	AATAAA	-23	NA	155071502	155123074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_19065.known	chr1	+	2866	15	FSM	ENSG00000163050.18	ENST00000366777.4	2866	15	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_6	17.4830822015257	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGCGTGTACCCTCTT	-2	True	NA	19	True	AATAAA	-19	NA	226940293	226987544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226940400_226961376_226961563_226964999_226965411_226965670_226965738_226977448_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
transcript_190651.known	chrX	+	2769	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_4	49.3060848171907	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTCAATGTCTTGG	2	True	NA	13	True	AATAAA	-26	NA	155071507	155123077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_190665.known	chrX	-	881	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	40	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	130	False	155071165	-2	True	AATAAA	-18	NA	155071136	155061621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155061992_155063965_155064034_155070693
transcript_190667.known	chrX	+	1616	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_3	42.0970307741532	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	-2	True	NA	42	True	ATTAAA	-43	NA	155216459	155239841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
transcript_190670.known	chrX	-	3413	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAAGTGTGTGTTATA	-14	True	NA	-6	True	AGTAAA	-23	NA	155264491	155258234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155261230_155264073
transcript_190673.known	chrX	-	3952	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	28.1519202230487	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAGAAGTTACCACAT	-3	True	NA	NA	False	AATAAA	-24	NA	155612952	155489010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_190679.known	chrX	-	1248	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	33.2949779329489	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTGAGATCTTTCT	72	False	NA	NA	False	AATAAA	-17	NA	155612877	155492534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_190682.nic	chrX	-	720	3	ISM	ENSG00000185973.12	ENST00000369439.4	1248	7	-90	31736	-15	0	5prime_fragment	FALSE	canonical	3	118	junction_1	14	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTAATAGTGAGA	-18	True	NA	NA	False	AATAAA	-22	NA	155612967	155524270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_155524633_155545095_155545278_155612791
transcript_190684.known	chrX	+	2594	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	19.5281063796649	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	-1	True	NA	NA	False	AATAAA	-21	NA	155881344	155943769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_190686.known	chrX	+	696	7	FSM	ENSG00000124333.16	ENST00000488344.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	81.2412388438833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGGAAAGAAGAAGTT	14	True	NA	NA	False	NA	NA	NA	155881359	155941944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155881449_155889457_155889613_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_190689.known	chrX	+	1826	8	FSM	ENSG00000182484.15	ENST00000460206.6	1826	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	81.6940534393229	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTCTCGGGGTCAGTG	NA	False	NA	NA	False	AATAAA	-23	NA	156021687	156025710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_156021793_156021998_156022146_156022313_156022835_156023011_156023214_156023301_156023461_156024119_156024273_156025031_156025101_156025240
transcript_190691.known	chrY	-	828	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTGGTATTTCATTT	-1	True	NA	-11	True	AATAAA	-17	NA	2787682	2786854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_2786900_2787700
transcript_190693.known	chrY	+	1189	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_1	382.874508016516	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCCCTTTTTCCTTGCT	0	True	NA	NA	False	ATTAAA	-19	NA	2841601	2867268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_190695.known	chrY	+	811	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	814.872314469506	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	47	False	NA	-27	True	NA	NA	NA	2841919	2866862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_190700.nic	chrY	+	1801	7	ISM	ENSG00000067646.12	ENST00000383052.5	5113	8	-417	4458	-417	-5	5prime_fragment	FALSE	canonical	3	43	junction_3	5.05525029603437	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGACCTGATTCCAGGC	NA	False	NA	NA	False	AAGAAA	-3	NA	2934863	2978048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939
transcript_190703.nnic	chrY	+	2956	3	NIC	ENSG00000099715.14	novel	4824	7	NA	NA	0	-1148	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCATTCCCCTA	0	True	NA	NA	False	AAAAAG	-6	NA	5000295	5100289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_5000606_5056888_5057460_5098214
transcript_190709.nnic	chrY	+	1684	4	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	-335	-175225	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	17.9691092959247	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTAATCCCAGCAATGT	485	False	NA	NA	False	NA	NA	NA	6910350	6916458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_6910983_6912087_6912173_6914578_6914679_6915591
transcript_190710.nnic	chrY	+	1722	4	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	-243	-175225	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	17.1464281994822	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTAATCCCAGCAATGT	577	False	NA	NA	False	NA	NA	NA	6910442	6916458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_6910983_6912087_6912173_6914578_6914809_6915591
transcript_190714.nnic	chrY	+	1584	3	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	-335	-175225	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	16	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTAATCCCAGCAATGT	485	False	NA	NA	False	NA	NA	NA	6910350	6916458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_6910983_6912087_6912173_6915591
transcript_190716.nic	chrY	+	1281	2	ISM	ENSG00000092377.15	ENST00000346432.3	2312	18	-216	178828	-216	-178828	5prime_fragment	FALSE	canonical	3	49	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTGTGCAAAAATTACT	604	False	NA	NA	False	NA	NA	NA	6910469	6912855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_6910983_6912087
transcript_190721.known	chrY	+	7218	8	FSM	ENSG00000099725.14	ENST00000528056.5	7218	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	4.74234076362795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTTTGTCGCTTCTG	-7	True	NA	20	True	AATAAA	-21	NA	7273971	7381548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_7274479_7303936_7304106_7325905_7326170_7341114_7341235_7356134_7356231_7367355_7367434_7371742_7371890_7375711
transcript_190725.nic	chrY	+	2055	3	ISM	ENSG00000099725.14	ENST00000533551.5	1019	7	-343	44586	-2	-1121	5prime_fragment	FALSE	canonical	3	20	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGTTATTTTTATTA	-9	True	NA	NA	False	ATTAAA	-32	NA	7273969	7327282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_7274479_7303936_7304106_7325905
transcript_190735.nnic	chrY	-	802	5	NNC	ENSG00000206159.12	novel	617	4	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	52.2781024904309	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	-13	True	NA	-16	True	AATAAA	-13	NA	12421598	12378536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_-_12378750_12382178_12382328_12406795_12406938_12420315_12420455_12421439
transcript_190742.nic	chrY	-	731	4	NIC	ENSG00000206159.12	novel	639	3	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	47.4856703531591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACGCATAGCTTCTG	NA	False	NA	-10	True	ATTAAA	-20	NA	12421643	12354415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_-_12354772_12406795_12406938_12420315_12420455_12421549
transcript_190743.nnic	chrY	-	667	4	FSM	ENSG00000206159.12	ENST00000689264.1	617	4	-39	-11	-11	9	multi-exon	FALSE	canonical	3	55	junction_1	41.0852771683483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGTACTATTATAT	-13	True	NA	-2	True	AATAAA	-27	NA	12421598	12378522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421439
transcript_190744.nnic	chrY	-	549	4	FSM	ENSG00000206159.12	ENST00000382965.3	534	4	-6	-9	-3	9	multi-exon	FALSE	canonical	3	55	junction_1	39.7184535896799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGTACTATTATAT	-5	True	NA	-2	True	AATAAA	-27	NA	12421590	12378522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421549
transcript_190752.known	chrY	+	5284	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	186.269219739124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662333	12692233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
transcript_190754.nic	chrY	+	540	4	ISM	ENSG00000114374.13	ENST00000651177.1	9640	48	-14	158747	-14	-6814	5prime_fragment	FALSE	canonical	3	234	junction_3	170.247532205968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGCTAGCTGAAGAA	-11	True	NA	NA	False	NA	NA	NA	12662353	12702055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009
transcript_190760.known	chrY	-	1153	3	FSM	ENSG00000286009.2	ENST00000652216.1	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACTTGCTCATGATTG	NA	False	NA	4	True	ATTAAA	-24	NA	12663474	12661308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_12662122_12662525_12662752_12663360
transcript_190763.known	chrY	+	4408	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_9	39.1937794012009	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	-8	True	NA	18	True	AATAAA	-14	NA	12904867	12920478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_190784.known	chrY	-	4571	28	FSM	ENSG00000183878.16	ENST00000682216.1	4571	28	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	17.6341419684362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCCACGTTCCTCATT	19	True	NA	0	True	AATAAA	-27	NA	13479969	13234576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_190787.known	chrY	-	1539	7	FSM	ENSG00000183878.16	ENST00000382893.2	1539	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	5.87839736284947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTCTATAATTGAAT	10	True	NA	NA	False	ATTAAA	-26	NA	13479978	13396301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_190790.known	chrY	-	686	2	FSM	ENSG00000183878.16	ENST00000479713.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACCGGGCTAAACCGGG	-5	True	NA	NA	False	NA	NA	NA	13479923	13479041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13479318_13479513
transcript_190804.nnic	chrY	+	974	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-8	-66871	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	49.418493501927	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAGTATTCTTTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	13751647	13791723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13791371
transcript_190806.nnic	chrY	+	1115	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-41	-52353	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	59.2473628105083	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCTGGAATTGATC	NA	False	NA	NA	False	AATAAA	-16	NA	13751614	13806241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13805781
transcript_190812.nic	chrY	+	2313	3	ISM	ENSG00000241859.7	ENST00000430079.5	689	6	-441	102362	-304	-102362	5prime_fragment	FALSE	canonical	3	134	junction_2	12	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTTAGGAAAATGGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	13751351	13756232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_13752006_13753093_13753160_13754639
transcript_190813.known	chrY	+	1337	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	-4	True	NA	5	True	AATAAA	-18	NA	13703898	13706024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_13704436_13705224
transcript_190815.known	chrY	+	7368	7	FSM	ENSG00000165246.15	ENST00000643089.1	7368	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	8.56348838577675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGTATATAAAGGGTT	NA	False	NA	NA	False	AATAAA	-2	NA	14522572	14845639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14824187_14824374_14829729_14830520_14840412
transcript_190832.nic	chrY	+	1279	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-205	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	24.9449393665328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	784	False	NA	NA	False	AATAAA	-23	NA	14524323	14733549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_14524709_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_190836.known	chrY	-	827	5	FSM	ENSG00000176728.10	ENST00000664804.1	827	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.597329924046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	1462	False	NA	1	True	AATAAA	-17	NA	19076029	18872500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_18872835_18877067_18877206_18932650_18932842_19068723_19068799_19075940
transcript_190843.known	chrY	-	541	3	FSM	ENSG00000176728.10	ENST00000667262.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	22.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGTATCAGGTGAC	1480	False	NA	-1	True	AATAAA	-15	NA	19076011	18872502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_18872835_18877067_18877206_19075940
transcript_190846.known	chrY	-	978	3	FSM	ENSG00000176728.10	ENST00000669869.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTTGCATGTCATTT	-7	True	NA	NA	False	AATAAA	-11	NA	19076008	18932006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_18932842_19068723_19068799_19075940
transcript_19085.nic	chr1	-	2979	12	NIC	ENSG00000143776.20	novel	5158	36	NA	NA	-25	-17152	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	14.80841842326	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAACTAAGAAAACAA	789	False	NA	NA	False	AATAAA	-18	NA	227318517	227129135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_227129232_227139575_227139743_227142944_227143025_227145488_227145738_227147358_227147560_227160542_227160637_227193785_227193935_227199556_227199653_227213135_227213220_227219262_227219421_227254063_227254156_227317004
transcript_190856.known	chrY	+	2098	4	FSM	ENSG00000131002.13	ENST00000459719.6	2098	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	15.8394724940223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTATTCTCTCATGTG	-8	True	NA	NA	False	AATAAA	-15	NA	19567349	19590418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082
transcript_19086.nic	chr1	-	2821	11	ISM	ENSG00000143776.20	ENST00000366764.8	5158	36	-1308	134899	-25	-17152	5prime_fragment	FALSE	canonical	3	29	junction_5	7.98498591107085	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAACTAAGAAAACAA	789	False	NA	NA	False	AATAAA	-18	NA	227318517	227129135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_227129232_227139575_227139743_227142944_227143025_227145488_227145738_227147358_227147560_227160542_227160637_227193785_227193935_227199556_227199653_227213135_227213220_227254063_227254156_227317004
transcript_190861.known	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.6823829464998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	24	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
transcript_190871.known	chrY	-	6825	27	FSM	ENSG00000012817.16	ENST00000317961.9	6825	27	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_24	17.0948017982283	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCTTGGTCTCTT	-4	True	NA	-3	True	AATAAA	-17	NA	19744726	19703864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709810_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741317_19741489_19741734_19741858_19743161_19743240_19744384_19744554_19744670
transcript_190882.known	chrY	+	1339	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.3530806173192	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	17	True	NA	4	True	AATAAA	-14	NA	20575775	20593154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
transcript_190885.known	chrY	+	746	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	233.069603337715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	-20	True	NA	14	True	AATAAA	-26	NA	20575793	20592630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
transcript_19089.known	chr1	+	2768	6	FSM	ENSG00000143740.15	ENST00000680854.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	127.875564514883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	10	True	NA	NA	False	NA	NA	NA	227728634	227781821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227731584_227731748_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_1909.known	chr1	-	2307	5	FSM	ENSG00000227372.12	ENST00000650039.1	2307	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	59.3990740668573	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTCACGCTATACT	488	False	NA	-85	True	NA	NA	NA	3746877	3737211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3740232_3740388_3742803_3742912_3743060_3743191_3745606
transcript_19090.known	chr1	+	2622	6	FSM	ENSG00000143740.15	ENST00000681149.1	2622	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	129.800462248792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	-20	True	NA	NA	False	NA	NA	NA	227735427	227781821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227739205_227739303_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_19091.known	chr1	+	1541	5	FSM	ENSG00000143740.15	ENST00000680695.1	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	133.355492950234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	26	False	NA	15	True	NA	NA	NA	227728706	227781208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227731584_227731748_227758994_227759486_227766958_227767084_227780526
transcript_19093.known	chr1	+	2552	5	FSM	ENSG00000143740.15	ENST00000680992.1	2552	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	114.632019959521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	7	True	NA	NA	False	NA	NA	NA	227728687	227781821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_19094.known	chr1	+	2403	5	FSM	ENSG00000143740.15	ENST00000426344.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	110.504242000025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCAGCTGGTCTTAGTCA	-12	True	NA	NA	False	AATAAA	-20	NA	227735435	227776969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227775788
transcript_19096.known	chr1	+	1923	5	FSM	ENSG00000143740.15	ENST00000617596.5	1923	5	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_1	25.460754112948	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	-13	True	NA	33	True	AATAAA	-18	NA	227735434	227781226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_19098.known	chr1	+	2503	5	FSM	ENSG00000143740.15	ENST00000680202.1	2503	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	115.061668247944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	233	False	NA	NA	False	NA	NA	NA	227735680	227781821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735731_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_1910.known	chr1	-	3831	5	FSM	ENSG00000227372.12	ENST00000647831.1	3831	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.1466547015754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACACTTTATTATGTTAC	29	False	NA	NA	False	NA	NA	NA	3747336	3736192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3740232_3740388_3742803_3742958_3743060_3743191_3745606
transcript_19100.known	chr1	+	1446	4	FSM	ENSG00000143740.15	ENST00000366760.5	1446	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	122.224747448661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	32	True	NA	33	True	AATAAA	-18	NA	227728656	227781226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227758994_227759486_227766958_227767084_227780526
transcript_19101.known	chr1	+	1363	4	FSM	ENSG00000143740.15	ENST00000681929.1	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	116.608556956836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	-13	True	NA	15	True	NA	NA	NA	227735434	227781208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227780526
transcript_19103.known	chr1	+	2375	3	FSM	ENSG00000143740.15	ENST00000480897.5	2375	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	227728538	227734352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227731584_227731748_227732388
transcript_19105.nic	chr1	+	2968	2	ISM	ENSG00000143740.15	ENST00000480897.5	2375	3	73	-25	-6	25	intron_retention	FALSE	canonical	3	9	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGAGTGGAGACGCCTT	-13	True	NA	NA	False	TTTAAA	-23	NA	227728611	227734377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_227728787_227731584
transcript_19106.known	chr1	+	2202	2	FSM	ENSG00000143740.15	ENST00000480265.1	2202	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	227728548	227734352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227732388
transcript_19107.known	chr1	-	2484	6	FSM	ENSG00000081692.13	ENST00000620518.5	2484	6	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_2	15.1340675299141	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-30	True	NA	-4	True	AATGAA	-15	NA	227735302	227731190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_227732677_227732880_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_19108.known	chr1	-	2502	6	FSM	ENSG00000081692.13	ENST00000438896.3	2502	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.6357892914261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTCATATGTGTCTG	NA	False	NA	-12	True	NA	NA	NA	227735411	227731233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_227732677_227732928_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_19109.known	chr1	+	3452	2	FSM	ENSG00000286389.2	ENST00000665412.1	3452	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATACTGATTTCAT	-2	True	NA	NA	False	CATAAA	-9	NA	227788522	227792179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227788900_227789104
transcript_19110.known	chr1	-	4005	4	FSM	ENSG00000143816.8	ENST00000272164.6	4005	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATCTCAGTCTGCTGC	-1	True	NA	NA	False	AATAAA	-17	NA	227947932	227918655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_227922001_227924137_227924401_227925262_227925520_227947792
transcript_19113.known	chr1	+	578	6	FSM	ENSG00000143761.16	ENST00000473949.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1246.29264621115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGCACTCACTACGC	77	False	NA	NA	False	NA	NA	NA	228082790	228097894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082851_228096450_228096505_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_19119.known	chr1	+	1840	5	FSM	ENSG00000143761.16	ENST00000272102.10	1840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	313.435300341235	5551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCCAGTGCTTCCA	-6	True	NA	25	True	AATAAA	-18	NA	228082707	228099212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082766_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_1912.known	chr1	-	3719	5	FSM	ENSG00000227372.12	ENST00000648479.1	3719	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	64.165313838553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGAAAACCATCCGCC	651	False	NA	-89	True	NA	NA	NA	3746714	3735685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3740232_3740388_3742803_3742961_3743060_3743191_3745606
transcript_19121.known	chr1	+	820	5	FSM	ENSG00000143761.16	ENST00000470558.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	994.829727893171	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTGTTTCCAATGA	75	False	NA	NA	False	NA	NA	NA	228082788	228098188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082851_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_19125.known	chr1	+	597	5	FSM	ENSG00000143761.16	ENST00000482962.5	597	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1108.30602723255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGCACTCACTACGCCA	4	True	NA	NA	False	NA	NA	NA	228083221	228097896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228083353_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_19127.known	chr1	+	678	5	FSM	ENSG00000143761.16	ENST00000469235.5	678	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1108.30602723255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGGCGACGGGCTCTAT	35	False	NA	NA	False	NA	NA	NA	228083149	228097948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228083310_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_19134.known	chr1	+	712	4	FSM	ENSG00000143761.16	ENST00000470670.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	319.779090415034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCACTCCTCTTGCCCT	16	True	NA	NA	False	NA	NA	NA	228082729	228098027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082766_228097077_228097453_228097590_228097716_228097851
transcript_19141.known	chr1	+	2006	5	FSM	ENSG00000143761.16	ENST00000541182.1	2006	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1107.87440059783	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGCTCTCCAGTGCTTCC	35	False	NA	24	True	AATAAA	-17	NA	228083149	228099211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228083375_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_19142.known	chr1	-	1290	8	FSM	ENSG00000143793.13	ENST00000272139.5	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_5	28.4296482208131	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-19	True	NA	-8	True	AATAAA	-17	NA	228103325	228100730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228101255_228101338_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_19146.known	chr1	-	1429	7	FSM	ENSG00000143793.13	ENST00000485896.5	1429	7	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	28.0322235214325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-14	True	NA	-8	True	AATAAA	-17	NA	228103320	228100730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228101255_228101338_228101474_228102079_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_19147.nic	chr1	-	732	7	ISM	ENSG00000143793.13	ENST00000272139.5	1290	8	-40	682	24	0	5prime_fragment	FALSE	canonical	3	317	junction_4	25.5669056920595	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAGAAGAAGAAAGA	5918	False	NA	33	True	AAAAAG	-19	NA	228103365	228101412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_19158.known	chr1	-	2256	5	FSM	ENSG00000143793.13	ENST00000469781.5	2256	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_2	31.736217480979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAATTGGAAGGTCAGTA	-1	True	NA	-3	True	AATAAA	-22	NA	228103441	228100725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228101255_228101338_228102561_228102642_228102689_228102898_228103050_228103133
transcript_19160.nic	chr1	-	931	5	NIC	ENSG00000143793.13	novel	1290	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	317	junction_2	27.4089401473315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAGAAGAAGAAAGA	-19	True	NA	33	True	AAAAAG	-19	NA	228103325	228101412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_228101474_228102079_228102561_228102642_228102689_228102898_228103050_228103133
transcript_19166.known	chr1	-	864	6	FSM	ENSG00000162910.19	ENST00000430433.5	864	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	286.120534041162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTCTGTCTCCCCA	NA	False	NA	0	True	NA	NA	NA	228109312	228106679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108085_228108234_228108319_228108954_228109022_228109148
transcript_19171.known	chr1	-	1423	6	FSM	ENSG00000162910.19	ENST00000366731.9	1423	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	289.228352690396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108138_228108234_228108319_228108436_228109022_228109148
transcript_19172.nic	chr1	-	775	6	NIC	ENSG00000162910.19	novel	665	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_4	278.367670536648	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-17	True	NA	-7	True	NA	NA	NA	228109300	228106686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954_228109022_228109148
transcript_19173.known	chr1	-	665	6	FSM	ENSG00000162910.19	ENST00000391867.8	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	321.663177873999	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-16	True	NA	-7	True	NA	NA	NA	228109299	228106686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436_228108475_228108954_228109022_228109260
transcript_19181.known	chr1	-	722	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	338.238451391914	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-23	True	NA	1	True	NA	NA	NA	228109306	228106678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
transcript_19182.known	chr1	-	603	5	FSM	ENSG00000162910.19	ENST00000366747.7	603	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	340.068375477638	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109260
transcript_19183.nic	chr1	-	1306	5	NIC	ENSG00000162910.19	novel	1423	6	NA	NA	-39	0	intron_retention	FALSE	canonical	3	166	junction_3	253.411720328796	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	NA	False	NA	-7	True	NA	NA	NA	228109351	228106686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228109022_228109148
transcript_19185.known	chr1	-	738	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	192.913678882551	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-16	True	NA	-5	True	NA	NA	NA	228109299	228106684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
transcript_19186.known	chr1	-	632	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	248.778013497978	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
transcript_19189.known	chr1	-	661	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	312.292953633105	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	0	True	NA	1	True	NA	NA	NA	228109283	228106678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
transcript_19190.known	chr1	-	565	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	343.321359014489	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
transcript_19196.known	chr1	-	1212	3	FSM	ENSG00000162910.19	ENST00000366735.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_2	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	279	False	NA	1	True	NA	NA	NA	228109004	228106678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234
transcript_19205.known	chr1	+	1065	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	534.98257857149	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	-3	True	NA	NA	False	AATAAA	-20	NA	228140289	228148946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_19209.nic	chr1	+	1687	9	NIC	ENSG00000143774.17	novel	1100	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_2	510.823293811079	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	0	True	NA	NA	False	AATAAA	-20	NA	228140227	228148946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_228140364_228141123_228141830_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_19212.known	chr1	+	937	8	FSM	ENSG00000143774.17	ENST00000366730.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	466.048871922686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGTGACCCCCGAC	NA	False	NA	NA	False	NA	NA	NA	228139961	228148840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140160_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_19213.known	chr1	+	656	8	FSM	ENSG00000143774.17	ENST00000453943.5	656	8	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	190.486594953931	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGCTTGCTGTCTGT	5	True	NA	NA	False	AAGAAA	-16	NA	228140297	228148691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_19214.known	chr1	+	850	8	FSM	ENSG00000143774.17	ENST00000366722.5	850	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	668.530340617784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGGAGATGCTGCCCC	24	True	NA	NA	False	NA	NA	NA	228140316	228148808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145491_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147620_228147700_228148370_228148540_228148664
transcript_19216.known	chr1	+	689	8	FSM	ENSG00000143774.17	ENST00000366721.5	689	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	549.273248976151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCACCCCCTTGGCAGG	39	True	NA	NA	False	NA	NA	NA	228140331	228148752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145510_228145650_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_19225.known	chr1	+	842	7	FSM	ENSG00000143774.17	ENST00000366728.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	485.258264569841	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	-3	True	NA	NA	False	AATAAA	-29	NA	228140289	228148955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
transcript_1923.known	chr1	-	446	2	FSM	ENSG00000116213.16	ENST00000479331.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAAACTCCAACGTAG	9108	False	NA	NA	False	TTTAAA	-1	NA	3650061	3647245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3647561_3649930
transcript_19237.known	chr1	+	7828	3	FSM	ENSG00000181873.13	ENST00000366711.4	7828	3	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	1	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTACGGGCTCTATGGTG	-1	True	NA	7	True	AATAAA	-18	NA	228165803	228182257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228166158_228174691_228175030_228175121
transcript_19238.known	chr1	+	853	3	FSM	ENSG00000181873.13	ENST00000546123.2	853	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGTCTTCCCGTCCCAT	8745	False	NA	NA	False	NA	NA	NA	228174549	228175575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228174611_228174691_228175030_228175121
transcript_19239.known	chr1	+	20499	81	FSM	ENSG00000154358.23	ENST00000284548.16	20499	81	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.28162667585806	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGATTCTCCTTGCC	3	True	NA	4	True	AATAAA	-16	NA	228208062	228361250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228208186_228211765_228212772_228213440_228213711_228214173_228214435_228214789_228215099_228215562_228215830_228216420_228216703_228217012_228217289_228224458_228224735_228243182_228243459_228244295_228244572_228245412_228245689_228246527_228246804_228249964_228250241_228256650_228256927_228264115_228264392_228268529_228268806_228273769_228274049_228274177_228274445_228274571_228274842_228275759_228276027_228276449_228276717_228276929_228277043_228277159_228277314_228277753_228277859_228278688_228278956_228279174_228279445_228279820_228280088_228280178_228280446_228280529_228280797_228281932_228282206_228283017_228283285_228283502_228283770_228286077_228286351_228286772_228287040_228287693_228287961_228288060_228288325_228288624_228288889_228291897_228292162_228292522_228292787_228293352_228293617_228294151_228294416_228294779_228295044_228306371_228306639_228306900_228307168_228307258_228307532_228308110_228308384_228309098_228309296_228309483_228309560_228315846_228316120_228316708_228316985_228317463_228317752_228317891_228318174_228318883_228319255_228321343_228322215_228323327_228323607_228332859_228332939_228333198_228333324_228333582_228333781_228334511_228334545_228334814_228334914_228335079_228335299_228335790_228335852_228336199_228336271_228337003_228337127_228337243_228337384_228337943_228338145_228338289_228338373_228338852_228339027_228339944_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228350840_228350944_228351320_228351451_228352950_228353063_228356150_228356194_228359596
transcript_1924.known	chr1	+	506	4	FSM	ENSG00000235169.11	ENST00000642557.4	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	10.6770782520313	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	-2	True	NA	32	True	AATAAA	-35	NA	3772748	3775956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3772789_3773062_3773182_3775298_3775484_3775794
transcript_19241.known	chr1	+	2487	1	FSM	ENSG00000154358.23	ENST00000663720.1	2487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	228267634	228270121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228267600_228270100
transcript_19244.known	chr1	-	2710	6	FSM	ENSG00000154370.16	ENST00000284551.11	2710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.8966123106174	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTGCTGGTGCCTGC	-11	True	NA	-5	True	AATAAA	-20	NA	228406835	228393675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228395253_228396946_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
transcript_19247.known	chr1	-	682	5	FSM	ENSG00000154370.16	ENST00000602582.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	39.5790348543266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAGATCCCCTTCTCGGG	9812	False	NA	NA	False	NA	NA	NA	228406187	228394824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228395253_228396946_228397048_228397142_228397166_228402065_228402162_228406153
transcript_19248.known	chr1	-	2511	5	FSM	ENSG00000154370.16	ENST00000366699.3	2511	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.7737660757502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	24	True	NA	NA	False	NA	NA	NA	228406800	228395533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
transcript_1925.known	chr1	+	547	4	FSM	ENSG00000235169.11	ENST00000444870.7	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	26.6624996744283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCTTGTACACATGGAC	3	True	NA	58	True	GGGGCT	-34	NA	3772786	3775982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3772842_3773062_3773182_3775298_3775484_3775794
transcript_19253.known	chr1	-	1731	6	FSM	ENSG00000162931.12	ENST00000456946.6	1731	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.68328157299975	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCAGAGGCGCTACC	21	True	NA	NA	False	NA	NA	NA	228416757	228408699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228409276_228409388_228409412_228410945_228411177_228413796_228413893_228414643_228415078_228416386
transcript_19257.known	chr1	-	895	1	FSM	ENSG00000181218.6	ENST00000366695.3	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGCACTTTAATTCT	-6	True	NA	-14	True	ATTAAA	-19	NA	228457873	228456978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228457000_228457900
transcript_19259.known	chr1	+	2987	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	43.5524548852371	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTAATTTGTACTGT	-34	True	NA	NA	False	TTTAAA	-30	NA	229271110	229305894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_19263.nic	chr1	+	1452	8	NIC	ENSG00000168118.12	novel	2987	8	NA	NA	12	515	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	179.290210529847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATACTGTCCAGCTCTG	-22	True	NA	23	True	AATAAA	-26	NA	229271122	229304409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297519_229297637_229298976_229299073_229302861_229302990_229303805
transcript_19266.known	chr1	+	708	6	FSM	ENSG00000168118.12	ENST00000473894.1	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	216.494434108593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGATCTTTATGGGGAA	49	False	NA	-77	True	NA	NA	NA	229271193	229303894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_19268.known	chr1	+	2799	6	FSM	ENSG00000168118.12	ENST00000618010.4	2799	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	266.9011802147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGTAATTTGTAC	NA	False	NA	NA	False	TTTAAA	-27	NA	229271061	229305891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229295847_229295911_229297519_229297637_229298976_229299073_229302861_229302990_229303805
transcript_19272.known	chr1	+	531	3	FSM	ENSG00000168118.12	ENST00000481981.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAAATAATTGATGAT	NA	False	NA	NA	False	AATAAA	-16	NA	229271074	229288882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229286485_229286567_229288728
transcript_19273.known	chr1	-	5089	3	FSM	ENSG00000154429.11	ENST00000366687.5	5089	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTCTTTTGTGAGAA	8	True	NA	NA	False	AATAAA	-19	NA	229342517	229321010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229325412_229326737_229327007_229342098
transcript_19275.known	chr1	-	1491	7	FSM	ENSG00000143632.15	ENST00000366684.7	1491	7	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_4	10.6731750977236	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	0	True	NA	-1	True	ATTAAA	-24	NA	229434094	229431244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_19277.known	chr1	-	2236	6	FSM	ENSG00000143632.15	ENST00000684723.1	2236	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	144.445976060256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGGCAAGGGAGGGCC	-6	True	NA	NA	False	AAGAAA	-23	NA	229434100	229430364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229434003
transcript_19282.known	chr1	-	1423	7	FSM	ENSG00000143632.15	ENST00000366683.4	1423	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	136.812523793206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	144	False	NA	-1	True	ATTAAA	-24	NA	229434104	229431244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229431565_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_19283.known	chr1	-	5208	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_19	35.3765119818221	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAATAATTTTTTCT	-10	True	NA	-1	True	AGTAAA	-19	NA	229508341	229440258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_19287.known	chr1	-	779	6	FSM	ENSG00000069248.12	ENST00000366678.4	779	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	132.378245946983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTGAATGGCTGAAGC	5	True	NA	NA	False	AAGAAA	-42	NA	229508326	229499166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229499221_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_19291.known	chr1	-	3112	5	FSM	ENSG00000135801.10	ENST00000258281.6	3112	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	17.1955662890176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGTTGGCAT	53	False	NA	38	True	ATTAAA	-15	NA	229626047	229593120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229595095_229602194_229602920_229610105_229610211_229614340_229614486_229625884
transcript_19294.known	chr1	-	4062	4	FSM	ENSG00000135801.10	ENST00000366675.3	4062	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTGTAGCTTCTGTTG	130	False	NA	-9	True	AATAAA	-16	NA	229625970	229599193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229602920_229610105_229610211_229614340_229614486_229625884
transcript_19297.known	chr1	+	5601	10	FSM	ENSG00000135763.10	ENST00000258243.7	5601	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	19.6135503676589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTCCTGTGTAATAT	23	True	NA	35	True	CATAAA	-19	NA	229626246	229660200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229645858_229645970_229647509_229647753_229651234_229651323_229654248_229654389_229659099
transcript_193.nic	SIRV6	+	522	6	ISM	SIRV6A	SIRV602	574	8	-129	491	-5	0	5prime_fragment	FALSE	canonical	3	9392	junction_3	7592.14991948921	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	995	10788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724
transcript_19300.known	chr1	+	643	3	FSM	ENSG00000135763.10	ENST00000434387.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCAGGAGGGCATTTA	NA	False	NA	NA	False	NA	NA	NA	229650846	229659126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229651323_229654248_229654389_229659099
transcript_19306.known	chr1	+	4423	16	FSM	ENSG00000143641.10	ENST00000366672.5	4423	16	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_9	33.9937249111264	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTCTTTGCTGGCCAG	16	True	NA	19	True	AATAAA	-19	NA	230067237	230282122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230067407_230178217_230178312_230203136_230203291_230236013_230236113_230236352_230236421_230236659_230236726_230243305_230243428_230246062_230246151_230249183_230249272_230250456_230250561_230255217_230255345_230262572_230262666_230262921_230263006_230265240_230265368_230274444_230274565_230279302
transcript_19330.known	chr1	+	593	2	FSM	ENSG00000143641.10	ENST00000488903.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTAGTTTCTGCGTT	37	False	NA	NA	False	ATTAAA	-18	NA	230067258	230092033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230067407_230091588
transcript_19334.known	chr1	+	2843	18	FSM	ENSG00000135775.14	ENST00000366668.7	2843	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_14	42.2621576046222	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	21	False	NA	15	True	AATAAA	-15	NA	230642566	230693982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688422_230688563_230690013_230690154_230691383_230691565_230693291
transcript_19345.known	chr1	-	2116	5	FSM	ENSG00000135744.9	ENST00000366667.6	2116	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTTTCATTTAGCAG	-2	True	NA	NA	False	AATAAA	-28	NA	230714122	230702522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_230703330_230704192_230704338_230705932_230706201_230709994_230710854_230714085
transcript_19353.known	chr1	-	3726	4	FSM	ENSG00000119280.17	ENST00000366663.10	3726	4	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	30.7064958744707	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTGTGATGGGCCT	-10	True	NA	0	True	AATAAA	-19	NA	230868521	230837118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_230839909_230843353_230843897_230855667_230855719_230868179
transcript_19357.known	chr1	-	3276	23	FSM	ENSG00000143643.13	ENST00000366661.9	3276	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	10.5321232348806	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-9	True	NA	-2	True	AATAAA	-41	NA	230978861	230906242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916303_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230943805_230943899_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_19363.known	chr1	-	3112	21	FSM	ENSG00000143643.13	ENST00000366662.8	3112	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	15.9768582643773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-7	True	NA	-2	True	AATAAA	-41	NA	230978859	230906242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916300_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_19365.nic	chr1	-	2923	19	NIC	ENSG00000143643.13	novel	3276	23	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	15.7665257217097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	222	False	NA	-2	True	AATAAA	-41	NA	230978895	230906242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916303_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_19366.known	chr1	+	1428	6	FSM	ENSG00000173409.14	ENST00000310256.7	1428	6	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_3	19.3432158650003	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTCCCCTTTCCACTC	7	True	NA	NA	False	AATAAA	-18	NA	230979093	231000733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_19369.known	chr1	-	1503	2	FSM	ENSG00000182118.8	ENST00000366654.5	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGTTATTTTAT	-10	True	NA	-14	True	GATAAA	-14	NA	231040254	231018957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231020127_231039920
transcript_19371.known	chr1	-	1432	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	32.5149538246977	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGACTGTTAAGT	-19	True	NA	-20	True	AATAAA	-17	NA	231241178	231223762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_19372.known	chr1	-	1430	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	31.0129901098807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTGTGACTGTTAA	-16	True	NA	-22	True	AATAAA	-15	NA	231241175	231223764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_19375.known	chr1	-	2657	2	FSM	ENSG00000143633.13	ENST00000471936.1	2657	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCTTCAAATGTCT	-28	True	NA	NA	False	CATAAA	-17	NA	231241187	231236695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231239189_231241023
transcript_19377.known	chr1	+	2641	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_9	45.7906346562506	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTGAAAGAGATATTT	-1	True	NA	60	True	ATTAAA	-18	NA	231241211	231277973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_1938.known	chr1	-	4303	7	FSM	ENSG00000130764.10	ENST00000378251.3	4303	7	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	21.9063664008637	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCAGATCCTTTCCCA	-1	True	NA	71	True	AATAAA	-17	NA	3796498	3778558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
transcript_19380.nic	chr1	+	2291	15	NIC	ENSG00000116906.13	novel	2641	16	NA	NA	-4	-136	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	119.606860256459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCAGCTCATTTCA	-10	True	NA	24	True	AATAAA	-24	NA	231241202	231277797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_19383.nic	chr1	+	694	3	ISM	ENSG00000116906.13	ENST00000416000.1	1924	13	-26	14518	-17	-5341	5prime_fragment	FALSE	canonical	3	463	junction_2	17	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTTTTTCAACCCCT	15	False	NA	NA	False	AATAAA	-41	NA	231241189	231260750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_231241457_231250960_231251144_231260506
transcript_19384.known	chr1	+	603	2	FSM	ENSG00000010072.16	ENST00000492437.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAGGCTTCTAGGG	22	True	NA	NA	False	AGTAAA	-12	NA	231338294	231340061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231338605_231339768
transcript_19385.known	chr1	-	5100	1	FSM	ENSG00000116903.7	ENST00000366645.1	5100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTGATATTAAGATAT	0	True	NA	-41	True	AATAAA	-25	NA	231337852	231332752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231332800_231337900
transcript_19386.known	chr1	-	4335	5	FSM	ENSG00000135766.9	ENST00000366641.4	4335	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	9.36416040016402	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGTGGTTATTTCCA	1	True	NA	-10	True	ATTAAA	-24	NA	231422287	231363755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231366476_231367568_231367637_231370561_231370699_231373979_231374100_231420997
transcript_19389.known	chr1	-	1090	4	FSM	ENSG00000135766.9	ENST00000658954.1	1090	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	40.3567425180312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGATTGTTGCCAGTGAC	9076	False	NA	NA	False	ATTAAA	-24	NA	231421262	231365907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231366476_231370561_231370699_231373979_231374100_231420997
transcript_19393.known	chr1	+	2634	6	FSM	ENSG00000116918.15	ENST00000366639.9	2634	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	48.6399013156894	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTTTTGTTTGTTC	-20	True	NA	138	True	AATAAA	-21	NA	231528668	231566524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127_231561256_231564527
transcript_19397.known	chr1	-	2172	3	FSM	ENSG00000233461.6	ENST00000654602.1	2172	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAATCTTTTCTTTTT	-22	True	NA	NA	False	TATAAA	-28	NA	231528604	231520728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231522638_231527337_231527416_231528419
transcript_19398.known	chr1	+	2761	9	FSM	ENSG00000162946.23	ENST00000602281.5	2761	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3.30718913883074	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTATGCTTATTTAAG	4	True	NA	NA	False	AATAAA	-13	NA	231626814	231819244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231626935_231693825_231694806_231701954_231702025_231749925_231750077_231767139_231767270_231770834_231771071_231795241_231795297_231800107_231800211_231818328
transcript_194.known	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	10867.1241200237	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
transcript_19402.nnic	chr1	+	2221	7	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41630	976	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_1	16.478942792411	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	-4	True	NA	NA	False	AAGAAA	-25	NA	232118460	232186619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232120627_232120730_232152075_232152169_232160170_232160224_232177207_232177267_232183937_232184078_232185098
transcript_19407.nnic	chr1	+	2119	6	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41630	976	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	14.5684590811795	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	-4	True	NA	NA	False	AAGAAA	-25	NA	232118460	232186619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232177207_232177267_232183937_232184078_232185098
transcript_19410.nnic	chr1	+	2060	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41630	976	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	12.8646803302686	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	-4	True	NA	NA	False	AAGAAA	-25	NA	232118460	232186619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_19416.known	chr1	-	6914	23	FSM	ENSG00000116991.12	ENST00000674635.1	6914	23	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_4	22.9572455657673	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTCAGGTGACTAG	-6	True	NA	NA	False	AATAAA	-27	NA	232630133	232397964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_232399274_232402391_232402474_232403447_232403572_232404124_232404179_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232574173_232574223_232629868
transcript_19422.known	chr1	+	1762	5	FSM	ENSG00000135778.12	ENST00000366627.4	1762	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	240.373147418758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGAACTCTTTGTT	15	True	NA	15	True	AATAAA	-17	NA	232950639	232977528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232976341
transcript_19423.known	chr1	+	6324	5	FSM	ENSG00000135778.12	ENST00000366628.10	6324	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	47.1824914560476	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTGTCTTATTTTC	-14	True	NA	16	True	TATAAA	-16	NA	232950610	232983882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232978162
transcript_19427.known	chr1	+	980	4	FSM	ENSG00000135778.12	ENST00000490807.5	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	228.663265280825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	-11	True	NA	-26	True	AAGAAA	-31	NA	232950613	232978751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232978162
transcript_19430.known	chr1	+	767	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	198.570446497514	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACATGATTTGGGT	-20	True	NA	49	True	NA	NA	NA	232950604	232978482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
transcript_19438.known	chr1	+	5853	10	FSM	ENSG00000143674.11	ENST00000366624.8	5853	10	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	12.8495568449309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGATCCTCTCTTGATT	-9	True	NA	44	True	AATAAA	-29	NA	233327723	233385148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_233328834_233346441_233346623_233353806_233353956_233354835_233355012_233362052_233362294_233372037_233372161_233375915_233376067_233376429_233376528_233378930_233379711_233382304
transcript_19440.known	chr1	+	3910	6	FSM	ENSG00000143674.11	ENST00000366623.7	3910	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	11.4472704170033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTCAAGATTGTTACAC	0	True	NA	NA	False	AATAAA	-13	NA	233327767	233374134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_233328834_233346441_233346623_233353806_233353956_233354835_233355012_233362052_233362294_233372037
transcript_19444.known	chr1	+	2061	3	FSM	ENSG00000135750.15	ENST00000366621.8	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	22.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGCTTTCATATATCA	4	True	NA	18	True	AATAAA	-23	NA	233614105	233672514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_233614527_233666594_233666991_233671270
transcript_19447.nic	chr1	+	841	3	ISM	ENSG00000183780.13	ENST00000366617.3	2762	7	-83	15282	-83	-15282	5prime_fragment	FALSE	canonical	3	45	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGATGTCTCCGTGTTGT	NA	False	NA	1	True	AATAAA	-13	NA	234214187	234309229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_234214575_234231416_234231742_234309100
transcript_19448.nic	chr1	+	3142	2	ISM	ENSG00000183780.13	ENST00000366618.8	3143	8	-5	416301	-5	-416301	5prime_fragment	FALSE	canonical	3	35	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATGATCTCCAGAGTG	-50	True	NA	NA	False	AAAACA	-23	NA	233904670	233908210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_233905131_233905528
transcript_19449.nic	chr1	+	1529	2	ISM	ENSG00000183780.13	ENST00000366617.3	2762	7	-83	91953	-83	-91953	5prime_fragment	FALSE	canonical	3	60	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATGAATGCTGGCCAA	NA	False	NA	NA	False	AAAAAG	-18	NA	234214187	234232558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_234214575_234231416
transcript_19450.known	chr1	-	1723	2	FSM	ENSG00000233332.1	ENST00000412483.1	1723	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTTGTTATCTCGTT	NA	False	NA	NA	False	CATAAA	-32	NA	234215088	234212605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_234214108_234214867
transcript_19451.known	chr1	+	697	3	FSM	ENSG00000168275.16	ENST00000619305.1	697	3	0	0	0	0	multi-exon	TRUE	canonical	3	532	junction_2	5.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTTGTT	12	True	NA	7	True	AGTAAA	-20	NA	234373467	234384048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_234373679_234374229_234374390_234383722
transcript_19453.known	chr1	+	641	3	FSM	ENSG00000168275.16	ENST00000366613.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	250	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTTGTTTTGTTTTT	6	True	NA	4	True	AGTAAA	-17	NA	234373682	234384045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_234373841_234374229_234374390_234383722
transcript_19454.known	chr1	+	1013	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTGTTTTTG	24	False	NA	5	True	AGTAAA	-18	NA	234373700	234384046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_234374390_234383722
transcript_19456.known	chr1	-	3283	5	FSM	ENSG00000173726.11	ENST00000366607.5	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_1	93.6199097414647	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTGGCGTATGTTT	1	True	NA	-39	True	ATTAAA	-15	NA	235128837	235109340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235112109_235113767_235113911_235119817_235119900_235122325_235122373_235128594
transcript_19461.known	chr1	-	5811	23	FSM	ENSG00000054267.22	ENST00000349213.7	5811	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	27.5841312627507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTCTAAAAGATTT	568	False	NA	-16	True	AATAAA	-25	NA	235328219	235166894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_19467.known	chr1	-	3463	17	FSM	ENSG00000054267.22	ENST00000474953.5	3463	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	319.089622990156	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTTGAGTTTTATA	NA	False	NA	-3	True	AATAAA	-34	NA	235194077	235131633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173_235161458_235168543_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012
transcript_19468.known	chr1	-	2315	11	FSM	ENSG00000054267.22	ENST00000466653.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	12.4402572320672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	570	False	NA	NA	False	NA	NA	NA	235328217	235228310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_19476.known	chr1	-	453	3	FSM	ENSG00000054267.22	ENST00000494543.1	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGAAAAGAAGCCATAAAG	NA	False	NA	-4	True	NA	NA	NA	235181865	235177855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235177914_235181070_235181185_235181584
transcript_19477.known	chr1	-	1847	11	FSM	ENSG00000188739.15	ENST00000408888.8	1847	11	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_7	39.7292083988594	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGCTCAAGTTC	6	True	NA	0	True	ATTAAA	-19	NA	235161250	235131182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_19480.nic	chr1	-	1277	10	NIC	ENSG00000188739.15	novel	1847	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	232.920799340531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCGTCTGCTATTCAT	-27	True	NA	-18	True	AATAAA	-19	NA	235161283	235131648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160892_235161068_235161173
transcript_19481.known	chr1	-	1273	10	FSM	ENSG00000188739.15	ENST00000447801.5	1273	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	235.194482172615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTATTATCTGCTGATA	36	True	NA	32	True	AATAAA	-1	NA	235161220	235131666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_19487.nic	chr1	+	1884	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-1	3491	0	0	multi-exon	FALSE	canonical	3	147	junction_4	25.7602376493308	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	-6	True	NA	8	True	AATAAA	-2	NA	235367425	235448952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_19489.known	chr1	+	2895	4	FSM	ENSG00000152904.11	ENST00000282841.9	2895	4	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	28.6395220320141	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAAGTAGATTTGTTC	-1	True	NA	8	True	ATTAAA	-24	NA	235328569	235344532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235328779_235335241_235335335_235341707_235341779_235342010
transcript_19492.nnic	chr1	+	3180	4	NIC	ENSG00000152904.11	novel	2895	4	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	213.685646582908	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTTATCCATACACT	-3	True	NA	13	True	AATAAA	-16	NA	235328567	235343093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_235330501_235335241_235335335_235341707_235341779_235342010
transcript_19494.known	chr1	+	1407	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	0	True	NA	58	True	NA	NA	NA	235328570	235343138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235328779_235341707_235341779_235342010
transcript_19496.known	chr1	+	5374	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	25.7602376493308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGAAGATCCTCATTCT	-5	True	NA	NA	False	ATTAAA	-19	NA	235367426	235452443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_19498.known	chr1	+	2036	17	FSM	ENSG00000284770.2	ENST00000643994.1	2036	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	78.3556594956612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGATTTTCTGATCTT	-6	True	NA	19	True	AATAAA	-13	NA	235367425	235448963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235432945_235433172_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_195.known	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	16794	junction_3	6208.15930852294	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
transcript_19500.known	chr1	+	1683	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.3242759573416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	-2	True	NA	0	True	NA	NA	NA	235367429	235448944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_19503.nic	chr1	-	4871	13	NIC	ENSG00000162885.14	novel	3862	14	NA	NA	-29	0	intron_retention	FALSE	canonical	0	0	junction_11	75.7555920194821	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTTAATAGAATTTATA	-30	True	NA	10	True	AATAAA	-26	NA	235504481	235447189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
transcript_19504.nnic	chr1	-	2936	13	NNC	ENSG00000162885.14	novel	4719	12	NA	NA	-63	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.4483057299405	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTTTGTATGTATT	NA	False	NA	-13	True	AATAAA	-24	NA	235504515	235447212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_235448417_235450239_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
transcript_19505.nnic	chr1	-	2889	13	NNC	ENSG00000162885.14	novel	4719	12	NA	NA	-8	-23	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	58.1635624768635	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTTTGTATGTATT	-9	True	NA	-13	True	AATAAA	-24	NA	235504460	235447212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_235448425_235450239_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
transcript_19508.nic	chr1	-	2069	13	NIC	ENSG00000162885.14	novel	3862	14	NA	NA	-3	-784	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	75.7555920194821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTAAATCCTGATGCA	23	True	NA	NA	False	TATAAA	-9	NA	235504428	235449938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
transcript_19509.known	chr1	-	4719	12	FSM	ENSG00000162885.14	ENST00000366600.8	4719	12	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_5	26.2291239302566	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTTAATAGAATTTATA	-1	True	NA	10	True	AATAAA	-26	NA	235504452	235447189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
transcript_19519.nic	chr1	-	1442	9	ISM	ENSG00000162885.14	ENST00000366600.8	4719	12	-4	8282	-4	-1185	5prime_fragment	FALSE	canonical	3	167	junction_2	27.4769790006107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTGAGATATACAATT	-5	True	NA	NA	False	AATAAA	-28	NA	235504456	235455471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
transcript_19524.known	chr1	-	1874	8	FSM	ENSG00000162885.14	ENST00000313984.3	1874	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	91.7643388117139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGGTGTAAATTGT	29	True	NA	NA	False	AATAAA	-26	NA	235504422	235464895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
transcript_19536.known	chr1	+	2001	4	FSM	ENSG00000284770.2	ENST00000644625.1	2001	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	8.49836585598797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGACAGAATGAGACTC	-2	True	NA	NA	False	NA	NA	NA	235367429	235416142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432
transcript_19539.known	chr1	-	1869	4	FSM	ENSG00000162885.14	ENST00000494378.1	1869	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	105.085150658354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGGAAAATGCAGA	26	True	NA	NA	False	AATAAA	-22	NA	235504425	235478907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235480150_235484321_235484516_235494680_235494829_235504140
transcript_19541.nic	chr1	-	747	2	ISM	ENSG00000162885.14	ENST00000494378.1	1869	4	-90	15549	-63	-14353	5prime_fragment	FALSE	canonical	3	207	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGAAAAACCTTACTTT	NA	False	NA	NA	False	TTTAAA	-11	NA	235504515	235494456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_235494829_235504140
transcript_19543.known	chr1	-	4897	4	FSM	ENSG00000168243.11	ENST00000391854.7	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_3	48.4033974932431	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAATCCTACTTTTTTG	-19	True	NA	-11	True	AATAAA	-24	NA	235649784	235547684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235649661
transcript_19544.known	chr1	-	4978	4	FSM	ENSG00000168243.11	ENST00000450593.5	4978	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	406.244863215388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGAATCCTACTTTTT	3	True	NA	-13	True	AATAAA	-22	NA	235650754	235547686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235650548
transcript_19545.known	chr1	-	1595	3	FSM	ENSG00000168243.11	ENST00000366597.5	1595	3	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_2	49.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTTATTTTATTTA	NA	False	NA	-15	True	AATAAA	-14	NA	235595479	235550831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235552238_235583739_235583849_235595399
transcript_19546.known	chr1	-	5792	20	FSM	ENSG00000116962.15	ENST00000264187.7	5792	20	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_17	17.9984609991507	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTCTATCTTTTCTGA	0	True	NA	-9	True	AATAAA	-20	NA	236065090	235975829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235977989_235978994_235979108_235979821_235979946_235980495_235980654_235981610_235981783_235985378_235985506_235990885_235991059_235993644_235993873_236011920_236012044_236013410_236013561_236017147_236017274_236024069_236024214_236025895_236026142_236029549_236029751_236032400_236032653_236038103_236038254_236041909_236042293_236045456_236045684_236048689_236048990_236064854
transcript_19551.nic	chr1	-	3615	13	ISM	ENSG00000116962.15	ENST00000264187.7	5792	20	-43	17009	-24	-17009	5prime_fragment	FALSE	canonical	3	113	junction_10	21.4105049501926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTAGCTAATAATCATT	-2	True	NA	NA	False	AATATA	-24	NA	236065133	235992838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_235993873_236011920_236012044_236013410_236013561_236017147_236017274_236024069_236024214_236025895_236026142_236029549_236029751_236032400_236032653_236038103_236038254_236041909_236042293_236045456_236045684_236048689_236048990_236064854
transcript_19557.known	chr1	-	4994	16	FSM	ENSG00000086619.15	ENST00000354619.10	4994	16	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_11	7.03009404078083	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTATTTAATTTTTT	0	True	NA	NA	False	ATTAAA	-45	NA	236281958	236215100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_236218577_236220831_236220966_236221923_236222011_236225069_236225140_236226268_236226516_236226646_236226740_236230223_236230251_236232827_236232840_236235788_236235836_236236277_236236399_236243421_236243496_236249884_236249968_236252049_236252092_236253421_236253506_236269874_236269995_236281681
transcript_19561.known	chr1	+	2033	7	FSM	ENSG00000077585.14	ENST00000366592.8	2033	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	6.07590871118606	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCATAGTTTTTTTT	-13	True	NA	32	True	ATTAAA	-21	NA	236142538	236208907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236143037_236168705_236168756_236178413_236178637_236179878_236180029_236183777_236183907_236205125_236205251_236208049
transcript_19569.known	chr1	+	3116	6	FSM	ENSG00000186197.15	ENST00000359362.6	3116	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	6.7705243519243	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTTGTTGGTTTATT	-9	True	NA	22	True	AAAAAG	-45	NA	236395412	236484930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236395661_236409215_236409275_236414259_236414300_236427391_236427451_236468230_236468277_236482266
transcript_19575.known	chr1	-	8459	45	FSM	ENSG00000119285.11	ENST00000366582.8	8459	45	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_32	55.9406415041947	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTGCCTCTTCCTGA	-9	True	NA	-19	True	CATAAA	-17	NA	236604516	236549004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_19577.nic	chr1	-	2386	17	ISM	ENSG00000119285.11	ENST00000366581.6	6538	44	-58	34382	-46	10719	5prime_fragment	FALSE	canonical	3	301	junction_4	43.1225995708747	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTGAAAGTGTCATTA	-1	True	NA	NA	False	AATAAA	-1	NA	236604562	236585052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_19581.known	chr1	+	5957	10	FSM	ENSG00000116977.19	ENST00000366584.9	5957	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	11.5127411973232	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGGTCTGTTATA	1	True	NA	NA	False	AATAAA	-32	NA	236523981	236552981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_19584.nic	chr1	-	676	2	ISM	ENSG00000119285.11	ENST00000366579.1	793	3	-74	768	-46	-768	5prime_fragment	FALSE	canonical	3	516	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCCCTGCCACGAAGTA	-1	True	NA	NA	False	NA	NA	NA	236604562	236603592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_236604128_236604421
transcript_19586.known	chr1	+	4488	19	FSM	ENSG00000077522.15	ENST00000683111.1	4488	19	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	3.96473653632485	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTCTAAATTAAACTTAA	183	False	NA	NA	False	ATTAAA	-10	NA	236686681	236764595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236686800_236717857_236717973_236718893_236719014_236720104_236720192_236725932_236726021_236731232_236731315_236737121_236737215_236739301_236739533_236742895_236743044_236744625_236744777_236747666_236747776_236749123_236749265_236751469_236751653_236753946_236754082_236755018_236755199_236757485_236757633_236759723_236759790_236761014_236761174_236762460
transcript_19587.known	chr1	+	10547	33	FSM	ENSG00000116984.15	ENST00000366577.10	10547	33	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	11.6084812071821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATAGATTGTTGAATTT	0	True	NA	55	True	ATTAAA	-16	NA	236795291	236903981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
transcript_19590.known	chr1	+	10067	32	FSM	ENSG00000116984.15	ENST00000680454.1	10067	32	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_13	11.7406060927704	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATAACCTAAAATCTGG	-32	True	NA	-4	True	AATAAA	-11	NA	236795259	236900656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
transcript_19594.known	chr1	+	9179	7	FSM	ENSG00000133019.12	ENST00000676153.1	9179	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.21335164821342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGTTTGCTTTTATT	-4	True	NA	NA	False	AATAAA	-17	NA	239386567	239915450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_239387228_239492708_239492808_239545640_239545750_239632223_239632287_239678185_239678289_239827251_239827379_239907432
transcript_19596.nnic	chr1	+	3048	6	NIC	ENSG00000133019.12	novel	9179	7	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.979795897113271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAATACCAATTCAGCA	10	True	NA	NA	False	AATAAA	-17	NA	239386581	239909396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_239387228_239492708_239492808_239545640_239545750_239678185_239678289_239827251_239827379_239907432
transcript_196.known	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11891.1818588398	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
transcript_19601.known	chr1	+	8780	5	FSM	ENSG00000133019.12	ENST00000255380.8	8780	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGCTTTTATTTA	NA	False	NA	NA	False	AATAAA	-19	NA	239629072	239915452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_239629540_239632223_239632287_239678185_239678289_239827251_239827379_239907432
transcript_19604.nnic	chr1	+	2186	3	NNC	ENSG00000155816.21	novel	6429	18	NA	NA	-56	-83652	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCGTATTAAGTACATTT	NA	False	NA	NA	False	AAAAAG	-13	NA	240091826	240123535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_240092827_240092895_240093725_240123178
transcript_19607.nic	chr1	+	2235	2	ISM	ENSG00000155816.21	ENST00000319653.14	6429	18	-36	351652	-36	-83652	5prime_fragment	FALSE	canonical	3	9	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCGTATTAAGTACATTT	NA	False	NA	NA	False	AAAAAG	-13	NA	240091846	240123535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_240093725_240123178
transcript_19608.known	chr1	-	4176	2	FSM	ENSG00000180875.5	ENST00000318160.5	4176	2	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTTATTCATCATGTT	-1	True	NA	NA	False	AATAAA	-32	NA	240612155	240489572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_240493477_240611883
transcript_19610.known	chr1	+	473	2	FSM	ENSG00000287516.1	ENST00000413994.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTATATCGATTGAAC	441	False	NA	13	True	AATAAA	-24	NA	241424397	241433492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_241424550_241433171
transcript_19611.known	chr1	-	1791	10	FSM	ENSG00000091483.8	ENST00000366560.4	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_5	67.6550801975965	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCTATGTTAATTGA	-22	True	NA	-16	True	AATAAA	-37	NA	241519755	241497602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_19612.known	chr1	-	1818	10	FSM	ENSG00000091483.8	ENST00000684483.1	1818	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	176.90012527126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATAGTTGAATCTAT	NA	False	NA	6	True	AATAAA	-41	NA	241519785	241497580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508761_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_19616.known	chr1	-	2628	4	FSM	ENSG00000054277.14	ENST00000366554.3	2628	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	64.0954149859584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGTATGATATTAATAGC	-8	True	NA	NA	False	AATAAA	-19	NA	241640369	241593123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241594692_241597745_241597998_241604259_241604580_241639881
transcript_19617.known	chr1	-	1961	4	FSM	ENSG00000054277.14	ENST00000469376.5	1961	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.1504660239496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	818	False	NA	0	True	AATAAA	-26	NA	241640340	241593601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241594692_241597745_241597998_241604419_241604580_241639881
transcript_19623.known	chr1	-	1816	3	FSM	ENSG00000054277.14	ENST00000490673.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	37.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	6	True	NA	0	True	AATAAA	-26	NA	241640355	241593601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241594692_241597745_241597998_241639881
transcript_19625.known	chr1	-	920	2	FSM	ENSG00000203668.3	ENST00000638121.1	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAACAGAAGAAGCCAT	-3	True	NA	NA	False	AAGAAA	-27	NA	241640254	241635526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241636074_241639881
transcript_19626.known	chr1	-	705	2	FSM	ENSG00000203668.3	ENST00000638018.1	705	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGCTACGCCAGTCAG	-3	True	NA	NA	False	NA	NA	NA	241640254	241635465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241635798_241639881
transcript_19628.nic	chr1	+	3297	16	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-41	-3	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	40.4291424044037	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAATTGGGTTGTGGTTT	176	False	NA	18	True	AATACA	-16	NA	241848162	241889743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_241848354_241848730_241849028_241849108_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_19631.nic	chr1	+	3189	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-41	-3	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	30.8439952148927	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAATTGGGTTGTGGTTT	176	False	NA	18	True	AATACA	-16	NA	241848162	241889743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_19633.known	chr1	-	1207	4	FSM	ENSG00000197769.6	ENST00000357246.4	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGGGCTCGGTACTAG	1	True	NA	NA	False	NA	NA	NA	241999098	241995489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241996386_241998513_241998621_241998775_241998832_241998950
transcript_19634.known	chr1	-	8900	10	FSM	ENSG00000180287.17	ENST00000536534.7	8900	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	2.83278861866266	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACCTGTGTGTCTGTTCT	-3	True	NA	NA	False	AATAAA	-16	NA	242524697	242082985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_242090111_242100667_242100783_242107670_242107840_242113889_242114027_242124467_242124666_242219987_242220116_242265336_242265449_242288361_242288531_242348105_242348243_242524087
transcript_1964.known	chr1	-	5326	22	FSM	ENSG00000116198.14	ENST00000675375.1	5326	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	18.9350243567916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATACACACATATAC	-19	True	NA	NA	False	AATATA	-4	NA	3857225	3813030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837346_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19640.nic	chr1	-	3317	13	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-54	40552	13	-61	5prime_fragment	FALSE	canonical	0	0	junction_9	50.453154840241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTTCCACAGATGTGGGT	-3	True	NA	NA	False	AAGAAA	-8	NA	243255335	243164979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_19641.nic	chr1	-	3171	13	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-24	40668	16	-177	5prime_fragment	FALSE	canonical	0	0	junction_9	50.453154840241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAAGAGTTTCACTAGCC	477	False	NA	NA	False	AAGAAA	-13	NA	243255305	243165095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_1965.known	chr1	-	6449	22	FSM	ENSG00000116198.14	ENST00000676052.1	6449	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	20.6861878398834	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCACTTTATTTCA	-5	True	NA	NA	False	AATAAA	-13	NA	3857211	3812085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847632_3848607_3848782_3852294_3852422_3856888
transcript_19653.nic	chr1	-	2114	12	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-54	45266	13	0	5prime_fragment	FALSE	canonical	0	0	junction_8	52.431931473259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATACAAGGCATGATCAA	-3	True	NA	NA	False	NA	NA	NA	243255335	243169693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_1966.known	chr1	-	5295	21	FSM	ENSG00000116198.14	ENST00000674544.1	5295	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	20.4887164068421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATACACACATATAC	12	True	NA	NA	False	AATATA	-4	NA	3857194	3813030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3852294_3852422_3856888
transcript_19662.known	chr1	-	608	4	FSM	ENSG00000143702.16	ENST00000522995.1	608	4	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_3	76.8505042273634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATATGATATCCTTAAA	7	True	NA	NA	False	NA	NA	NA	243255348	243211894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_243211965_243221723_243221814_243225175_243225322_243255046
transcript_19663.known	chr1	+	2581	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	17.8119745111585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-22	True	NA	23	True	AATAAA	-16	NA	243256040	243500091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
transcript_1967.known	chr1	-	6233	21	FSM	ENSG00000116198.14	ENST00000675677.1	6233	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	19.586921657065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCACTTTATTTCA	-5	True	NA	NA	False	AATAAA	-13	NA	3857211	3812085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19678.known	chr1	+	525	3	FSM	ENSG00000054282.16	ENST00000497459.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTGTAATGTTTC	-14	True	NA	21	True	AATAAA	-14	NA	243487814	243500089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_243487879_243489013_243489141_243499755
transcript_19679.known	chr1	-	2555	13	FSM	ENSG00000035687.10	ENST00000366535.4	2555	13	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_9	42.7436642478547	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCGTATTGTGTTTT	7	True	NA	-2	True	ATTAAA	-21	NA	244451909	244408493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244409639_244411286_244411437_244415980_244416079_244417627_244417753_244418759_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320_244424388_244432544_244432596_244436824_244436894_244437665_244437769_244451634
transcript_19681.nic	chr1	-	452	3	ISM	ENSG00000035687.10	ENST00000366535.4	2555	13	-12	28338	-12	-17938	5prime_fragment	FALSE	canonical	3	734	junction_1	35.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGTATGAAAGAATG	-5	True	NA	15	True	NA	NA	NA	244451921	244436831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_244436894_244437665_244437769_244451634
transcript_19686.known	chr1	+	4017	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_3	84.4345160464605	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	20	True	NA	NA	False	ATTAAA	-19	NA	244653125	244709033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
transcript_1969.known	chr1	-	3328	20	FSM	ENSG00000116198.14	ENST00000461667.2	3328	20	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	10.4629672756119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTTCCTACCTGATTC	152	False	NA	NA	False	AATAAA	-25	NA	3857233	3822775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19691.known	chr1	+	859	4	FSM	ENSG00000121644.19	ENST00000263831.11	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	374.65806633071	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGCGCAGGAGGGAG	-3	True	NA	NA	False	NA	NA	NA	244653102	244705951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244653356_244686596_244686670_244691883_244692021_244705555
transcript_19694.nnic	chr1	+	613	3	NNC	ENSG00000121644.19	novel	1126	2	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTGAGTCGTGGGAA	-24	True	NA	4	True	AATAAA	-14	NA	244653081	244656521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_244653356_244653912_244654026_244656295
transcript_19698.known	chr1	-	6827	14	FSM	ENSG00000153187.20	ENST00000444376.7	6827	14	0	0	0	0	multi-exon	FALSE	canonical	2	3117	junction_4	695.053673803294	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	9	False	NA	-3	True	ATTAAA	-19	NA	244864560	244850296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
transcript_197.known	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	7976.38286164572	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
transcript_19701.known	chr1	-	6867	14	FSM	ENSG00000153187.20	ENST00000640218.2	6867	14	0	0	0	0	multi-exon	FALSE	canonical	2	1162	junction_13	1091.4602454765	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-1	True	NA	-3	True	ATTAAA	-19	NA	244864543	244850296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
transcript_19702.known	chr1	-	2698	14	FSM	ENSG00000153187.20	ENST00000638475.1	2698	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1360.38944998162	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTAAGCTAAATCATAGT	478	False	NA	NA	False	NA	NA	NA	244864091	244853938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860352_244860475_244862460_244862535_244862618_244862731_244863673
transcript_1973.nic	chr1	-	2488	15	ISM	ENSG00000116198.14	ENST00000461667.2	3328	20	-29	6541	-29	375	5prime_fragment	FALSE	canonical	3	72	junction_8	10.611170471513	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACAAGGGCAGCTGGC	123	False	NA	NA	False	AATAAA	-2	NA	3857262	3829316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19735.known	chr1	-	4844	13	FSM	ENSG00000153187.20	ENST00000476241.2	4844	13	0	0	0	0	multi-exon	FALSE	canonical	2	3117	junction_4	722.680480149346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCTGTAAAATGTGA	-11	True	NA	-35	True	NA	NA	NA	244864492	244854197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244862535_244862618_244862731_244863673
transcript_19752.nic	chr1	-	2361	11	ISM	ENSG00000153187.20	ENST00000640218.2	6867	14	-47	5696	-30	290	5prime_fragment	FALSE	canonical	2	1162	junction_10	1140.19519820073	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTGGCAAGAACCAGT	NA	False	NA	NA	False	AATAAA	-3	NA	244864590	244855992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
transcript_19753.nic	chr1	-	2316	11	ISM	ENSG00000153187.20	ENST00000444376.7	6827	14	-42	5696	-42	290	5prime_fragment	FALSE	canonical	2	3117	junction_1	654.59862511313	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTGGCAAGAACCAGT	NA	False	NA	NA	False	AATAAA	-3	NA	244864602	244855992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
transcript_1978.known	chr1	-	2174	12	FSM	ENSG00000116198.14	ENST00000494653.5	2174	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	11.3122474402198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGGGTTTTTCCAATGT	8	True	NA	NA	False	CATAAA	-17	NA	3857198	3833670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19782.known	chr1	+	2290	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	657.901883937787	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	-1	True	NA	9	True	AATAAA	-17	NA	244835658	244845057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
transcript_19789.known	chr1	+	1005	3	FSM	ENSG00000203667.10	ENST00000391839.6	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	527	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAATATTATTTAAAA	-4	True	NA	94	True	NA	NA	NA	244835655	244843880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244835757_244842194_244842259_244843040
transcript_19798.nic	chr1	-	943	2	ISM	ENSG00000153187.20	ENST00000476241.2	4844	13	-110	8519	-42	-4552	5prime_fragment	FALSE	canonical	3	3329	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGAAAGGCGGAGATAA	NA	False	NA	-6	True	AAAACA	-1	NA	244864602	244862716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_244862731_244863673
transcript_19799.known	chr1	+	860	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	74.3329520139086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTATTTATTTAAAAAC	-6	True	NA	NA	False	TTTAAA	-36	NA	244970355	245087556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_19801.known	chr1	+	6167	8	FSM	ENSG00000203666.13	ENST00000366522.6	6167	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	85.4481582897024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTAGGGAAGTTTTT	-2	True	NA	NA	False	AGTAAA	-7	NA	244969981	245127164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_19806.nic	chr1	+	1084	7	ISM	ENSG00000203666.13	ENST00000366523.6	1418	8	621	-2	17	2	3prime_fragment	FALSE	canonical	3	103	junction_1	45.4422710700071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	166	False	NA	4	True	AATAAA	-14	NA	244970302	245087839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_19808.known	chr1	+	906	6	FSM	ENSG00000203666.13	ENST00000473686.5	906	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	65.2686754883229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGTGGAAGGTGATT	30	False	NA	18	True	AATGAA	-37	NA	244970350	245087794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_1981.known	chr1	+	2923	8	FSM	ENSG00000169598.17	ENST00000477548.5	2923	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.233262004843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	0	True	NA	NA	False	AATAAA	-18	NA	3857472	3885429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858845_3860419_3860507_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_19811.known	chr1	+	1201	6	FSM	ENSG00000203666.13	ENST00000497591.5	1201	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	90	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAATCACTTCAATGT	149	False	NA	23	True	AATAAA	-35	NA	244970285	245091806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245091026
transcript_19814.known	chr1	+	1389	6	FSM	ENSG00000203666.13	ENST00000487845.5	1389	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	89.4507685825002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCCTTCTGTGTCTGG	-5	True	NA	33	True	CATAAA	-15	NA	244970389	245122991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_19815.known	chr1	-	1863	7	FSM	ENSG00000185420.19	ENST00000366516.5	1863	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.716900778831	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAATTGTCTTATTTG	NA	False	NA	-13	True	AATAAA	-27	NA	245930823	245749341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_245749665_245764040_245764150_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869
transcript_19816.nic	chr1	-	857	6	NIC	ENSG00000185420.19	novel	1042	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	100.590257977599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCATCTGGTAATTG	NA	False	NA	-22	True	AATAAA	-18	NA	245929937	245749350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_245749665_245764040_245764150_245858495_245858671_245863798_245863887_245927930_245928034_245929869
transcript_19820.known	chr1	-	1784	8	FSM	ENSG00000162851.8	ENST00000366514.5	1784	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	14.6133849743365	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-5	True	NA	NA	False	ATTAAA	-17	NA	246566261	246540560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
transcript_19825.known	chr1	+	5127	11	FSM	ENSG00000162852.14	ENST00000366513.9	5127	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	14.2017604542536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCCTTATTTTGTTTTT	-2	True	NA	26	True	AATAAA	-28	NA	246566455	246668595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138_246648038_246660198_246660335_246665699
transcript_19829.nic	chr1	+	2415	9	ISM	ENSG00000162852.14	ENST00000366513.9	5127	11	-122	20360	-110	0	5prime_fragment	FALSE	canonical	3	64	junction_3	15.5919650782061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTACAAGATGTTCTAT	-9	True	NA	11	True	AATAAA	-25	NA	246566333	246648235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138
transcript_19835.known	chr1	+	2141	12	FSM	ENSG00000143653.10	ENST00000366510.4	2141	12	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_8	29.2357191245106	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGTTCATTACCTAA	29	True	NA	NA	False	AATAAA	-19	NA	246724408	246768137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764358_246766057_246766140_246767194
transcript_1984.known	chr1	+	2842	7	FSM	ENSG00000169598.17	ENST00000378206.5	2842	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.2728471865115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	44	False	NA	NA	False	AATAAA	-18	NA	3857516	3885429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858845_3865761_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_19842.known	chr1	+	2545	2	FSM	ENSG00000227953.7	ENST00000426089.1	2545	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCGTAAGAAGTTAAC	NA	False	NA	5	True	AATAAA	-17	NA	246789093	246792385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_246789699_246790445
transcript_19845.known	chr1	-	862	6	FSM	ENSG00000197472.15	ENST00000366504.6	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	46.1155071532343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTTAATTTTCTTTT	55	False	NA	86	True	AATAGA	-18	NA	247007999	246945548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
transcript_19849.nic	chr1	-	683	5	ISM	ENSG00000197472.15	ENST00000366504.6	862	6	-69	22115	-11	17659	5prime_fragment	FALSE	canonical	3	69	junction_1	30.4712979703852	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCAGGTGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	247008068	246967663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
transcript_1985.known	chr1	+	2833	7	FSM	ENSG00000169598.17	ENST00000378209.8	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	5.61001089323561	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3	True	NA	NA	False	AATAAA	-18	NA	3857475	3885429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_19850.nic	chr1	-	647	5	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	-12	22117	-11	17659	5prime_fragment	FALSE	canonical	3	69	junction_1	35.7657308047802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCAGGTGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	247008068	246967663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_19851.known	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	19.4307888557196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-3	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
transcript_19856.known	chr1	-	714	5	FSM	ENSG00000197472.15	ENST00000491337.6	714	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	59.9515429326052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCTCTTTTTTTCCC	-2	True	NA	16	True	NA	NA	NA	247008056	246945618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_246945828_246967694_246967793_246999347_246999441_246999911_247000075_247007905
transcript_19857.known	chr1	-	4197	4	FSM	ENSG00000277462.2	ENST00000366503.3	4197	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	24.589970855344	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGCCTTGAGTGTTTT	0	True	NA	-2	True	NA	NA	NA	247078811	247034636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247038428_247038809_247038871_247039410_247039538_247078593
transcript_19859.known	chr1	-	1951	4	FSM	ENSG00000188295.15	ENST00000343381.10	1951	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	18.1536650722535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAATAA	8024	False	NA	-38	True	NA	NA	NA	247104372	247099990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247103938
transcript_1986.nnic	chr1	-	1162	7	NNC	ENSG00000116198.14	novel	1661	4	NA	NA	0	1300	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.0525675586969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACTTTAAATCTGTTG	-5	True	NA	NA	False	AATAAA	-21	NA	3857211	3841808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_3842068_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19860.known	chr1	-	1706	4	FSM	ENSG00000188295.15	ENST00000448299.7	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	6.84754619472471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCACATTGCAGTT	-12	True	NA	-9	True	AATAAA	-22	NA	247104356	247099961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247104196
transcript_19863.known	chr1	-	2258	1	FSM	ENSG00000221953.5	ENST00000623686.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACCTATGGTTTTAATC	NA	False	NA	NA	False	AATAAA	-44	NA	247112417	247110159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247110200_247112400
transcript_19865.known	chr1	-	2776	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	46.6499970227461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-6	True	NA	-31	True	AATAAA	-19	NA	247172020	247154988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
transcript_19868.known	chr1	-	956	4	FSM	ENSG00000196418.13	ENST00000491356.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58.9764548122573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	12	False	NA	-12	True	AATAAA	-17	NA	247172002	247138144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247138758_247159005_247159067_247159686_247159814_247171847
transcript_19874.nic	chr1	-	4640	11	NIC	ENSG00000162714.13	novel	5315	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	98.3648819447266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGAGGCTTTTACTTTC	-14	True	NA	-52	True	AATAAA	-33	NA	247331870	247298200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247322697_247322806_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_19882.known	chr1	-	5315	10	FSM	ENSG00000162714.13	ENST00000682384.1	5315	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	30.8740971777834	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGTTAGGCTTTTCA	-11	True	NA	-4	True	AATAAA	-16	NA	247331867	247297414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_19884.nic	chr1	-	4548	10	NIC	ENSG00000162714.13	novel	5315	10	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	70.9069987316894	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGAGGCTTTTACTTTC	NA	False	NA	-52	True	AATAAA	-33	NA	247331933	247298200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329569_247329965_247330082_247331431_247331648_247331789
transcript_19893.nnic	chr1	-	3031	10	NNC	ENSG00000162714.13	novel	1007	5	NA	NA	-48	-8297	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	72.7568248039698	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCAGGTGCAGTGGCTCA	1	True	NA	NA	False	AAAAAG	-17	NA	247331915	247306497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_247308028_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_19898.nnic	chr1	-	2452	10	NNC	ENSG00000162714.13	novel	1007	5	NA	NA	-66	-8894	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	72.7568248039698	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGAATATCTTTTCTT	NA	False	NA	-34	True	NA	NA	NA	247331933	247307094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_247308028_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_199.known	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_1	13939	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1382_1468_1535_1640
transcript_19904.known	chr1	-	5336	9	FSM	ENSG00000162714.13	ENST00000294753.8	5336	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	30.9030742807249	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTAGGCTTTTCATTT	173	False	NA	-1	True	AATAAA	-19	NA	247331743	247297411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431
transcript_19905.known	chr1	+	5170	6	FSM	ENSG00000162722.9	ENST00000366481.4	5170	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.24499443206436	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGGACCTGAAAATGTT	0	True	NA	24	True	AATAAA	-25	NA	247857186	247880138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_247857667_247860616_247860713_247864704_247864936_247867844_247867868_247867962_247868064_247875899
transcript_1991.nnic	chr1	-	1993	3	NNC	ENSG00000116198.14	novel	6449	22	NA	NA	-29	-3234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTGTCCTTATGTT	123	False	NA	NA	False	AATAAA	-18	NA	3857262	3849810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_3851303_3852294_3852422_3856888
transcript_19922.known	chr1	-	3148	7	FSM	ENSG00000175137.11	ENST00000366472.6	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	11.3051119214077	567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACTGTCCTTGCTGGA	18	True	NA	-1	True	AATAAA	-21	NA	248825915	248810445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_248812371_248812988_248813163_248814448_248814611_248816533_248816663_248816821_248816885_248824752_248825367_248825834
transcript_1993.nic	chr1	-	3529	2	ISM	ENSG00000116198.14	ENST00000676046.1	1661	4	-51	2690	-29	-2690	5prime_fragment	FALSE	canonical	3	113	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTCACTTTTGAGCAA	123	False	NA	NA	False	NA	NA	NA	3857262	3849266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3852422_3856888
transcript_19933.nnic	chr1	+	2272	4	NNC	ENSG00000171161.13	novel	3045	4	NA	NA	24	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	84.4169545898347	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCAAGTGCCGCCTTT	13	True	NA	22	True	AATAAA	-15	NA	248838247	248849514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_248838552_248844482_248844637_248845565_248845624_248847758
transcript_19935.known	chr1	+	3045	4	FSM	ENSG00000171161.13	ENST00000306562.8	3045	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	19.94993734326	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGCCGCCTTTATC	-11	True	NA	25	True	AATAAA	-18	NA	248838223	248849517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_248838552_248844482_248844637_248845565_248845663_248847051
transcript_19936.known	chr1	+	583	4	FSM	ENSG00000171161.13	ENST00000505503.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	80.6473806146238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGGCAGTGGCAGCGG	0	True	NA	NA	False	NA	NA	NA	248838330	248847285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_248838552_248844482_248844637_248845565_248845663_248847174
transcript_1994.known	chr1	-	1661	4	FSM	ENSG00000116198.14	ENST00000676046.1	1661	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	7.1336448530109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGAGTTTTGTTTTTT	-5	True	NA	NA	False	TTTAAA	-2	NA	3857211	3846576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19943.known	chr1	-	1942	12	FSM	ENSG00000171163.16	ENST00000306601.9	1942	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	42.7879646320711	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-1	True	NA	-6	True	AATAAA	-15	NA	248859085	248850007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
transcript_19949.nic	chr1	-	2232	11	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_6	44.0341912608827	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-3	True	NA	-6	True	AATAAA	-15	NA	248859045	248850007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857860_248858130_248858322_248858917
transcript_1995.known	chr1	+	3105	7	FSM	ENSG00000169598.17	ENST00000338895.7	3105	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.2728471865115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAGACATGTCAAGAA	-10	True	NA	NA	False	AATAAA	-9	NA	3857266	3885420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858867_3865761_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_19956.nic	chr1	-	1991	11	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_5	44.8576637822346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-3	True	NA	-6	True	AATAAA	-15	NA	248859045	248850007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
transcript_1996.known	chr1	+	2986	8	FSM	ENSG00000169598.17	ENST00000468793.5	2986	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.7285665058574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	-13	True	NA	NA	False	AATAAA	-18	NA	3857459	3885429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858867_3865811_3866001_3866283_3866399_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_19966.nic	chr1	-	2574	10	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	46.3728847975241	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	4	True	NA	-6	True	AATAAA	-15	NA	248859116	248850007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248858322_248858917
transcript_19969.nic	chr1	-	2489	10	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_6	39.0121854974052	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	4	True	NA	-6	True	AATAAA	-15	NA	248859116	248850007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856372_248856423_248856513_248856563_248857233_248858322_248858917
transcript_1997.known	chr1	-	3152	21	FSM	ENSG00000116198.14	ENST00000428079.6	3152	21	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	10.6447169995261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATGTTCTGGTTCCTT	152	False	NA	NA	False	AATAAA	-14	NA	3857233	3816148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_1998.known	chr1	-	1121	7	FSM	ENSG00000116198.14	ENST00000378223.3	1121	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.4139754043266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAATTGAAATGTTTTTT	-8	True	NA	NA	False	NA	NA	NA	3857214	3843108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3843324_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_19983.nic	chr1	-	2606	9	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_5	49.1852366061199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	61	False	NA	-6	True	AATAAA	-15	NA	248859059	248850007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855947_248856287_248856423_248856513_248856563_248857233_248858322_248858917
transcript_1999.known	chr1	-	1779	5	FSM	ENSG00000198912.12	ENST00000680054.1	1779	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	147.055261721572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	-12	True	NA	-30	True	AATACA	-14	NA	3900272	3889152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3890074_3890568_3891058_3891625_3891780_3892882_3892997_3900171
transcript_19998.known	chr1	+	2717	3	FSM	ENSG00000185220.12	ENST00000329291.6	2717	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	13	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCTGTTGTGCTAGCA	-21	True	NA	8	True	ATTAAA	-16	NA	248906234	248919146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_248906343_248913815_248913880_248916601
transcript_2.known	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00003_+_0_1000
transcript_20.known	ERCC-00058	+	1120	1	FSM	ERCC-00058A	DQ459418	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00058_+_0_1100
transcript_200.known	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	21087	junction_2	2414	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_10819_11031_11109_11205
transcript_20004.nnic	chr10	-	1677	4	NIC	ENSG00000261456.6	novel	1562	4	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	74198	46887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_48115_48614_48726_48803_48913_73968
transcript_20005.nnic	chr10	-	1669	4	NNC	ENSG00000261456.6	novel	1562	4	NA	NA	-2499	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	2.49443825784929	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	76662	46887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_48115_48614_48726_48803_48913_76440
transcript_20007.known	chr10	+	4229	15	FSM	ENSG00000015171.20	ENST00000381591.5	4229	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	41.9944116787567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	-14	True	NA	25	True	AATAAA	-19	NA	135068	254637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_135303_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_20009.known	chr10	+	4100	15	FSM	ENSG00000015171.20	ENST00000381604.9	4100	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	32.3356914071048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	1	True	NA	25	True	AATAAA	-19	NA	135454	254637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_20014.nic	chr10	-	2115	15	ISM	ENSG00000151240.17	ENST00000634311.1	4961	39	203136	106949	26	-19310	internal_fragment	FALSE	canonical	2	6	junction_13	26.9395581982773	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTGGGGGCTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	486532	384271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_384640_387744_387810_389990_390094_390263_390374_390739_390864_399108_399220_408925_409018_413912_414111_415768_415889_419064_419200_422823_423034_440870_440997_472438_472550_484780_484949_486458
transcript_20016.known	chr10	-	5963	18	FSM	ENSG00000107929.16	ENST00000316157.8	5963	18	0	0	0	0	multi-exon	FALSE	canonical	2	137	junction_6	36.1361324605187	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAAACATAGTTTT	-4	True	NA	-14	True	ATTAAA	-18	NA	931705	809496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_813214_814741_814851_814945_815071_817724_817890_820799_820846_825064_825317_825763_825871_829384_829595_829680_829735_830866_830978_836402_836507_842931_843069_844976_845056_863742_863884_864122_864271_884446_884507_885640_885761_931427
transcript_2002.known	chr1	-	1753	4	FSM	ENSG00000198912.12	ENST00000681823.1	1753	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	138.386736679817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	2	True	NA	-30	True	AATACA	-14	NA	3900258	3889152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3890074_3890568_3891058_3892740_3892997_3900171
transcript_20021.known	chr10	-	3104	1	FSM	ENSG00000205740.2	ENST00000615314.1	3104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTGCAATGCAGGGAG	-6	True	NA	NA	False	ATTAAA	-16	NA	988329	985225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_985200_988300
transcript_20023.known	chr10	+	4656	17	FSM	ENSG00000107937.19	ENST00000360803.9	4656	17	0	0	0	0	multi-exon	FALSE	canonical	2	410	junction_14	89.7620987666844	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTTCTTTGGTAAT	-15	True	NA	NA	False	AATAAA	-23	NA	988433	1019932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419_1010521_1012464_1012663_1014246_1014313_1015752_1015897_1017074
transcript_2003.known	chr1	-	1645	4	FSM	ENSG00000198912.12	ENST00000361605.4	1645	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	2.94392028877595	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGCAGTCGTATGT	-12	True	NA	-10	True	AATAAA	-17	NA	3900272	3889132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3890074_3890568_3891058_3892882_3892997_3900171
transcript_20035.nic	chr10	+	1415	13	ISM	ENSG00000107937.19	ENST00000360803.9	4656	17	-28	9415	-28	0	5prime_fragment	FALSE	canonical	3	636	junction_8	47.6914271355159	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTGTGTCACTTTTTA	1002	False	NA	4	True	AATATA	-28	NA	988405	1010517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419
transcript_20043.known	chr10	-	2739	5	FSM	ENSG00000067064.12	ENST00000381344.8	2739	5	0	0	0	0	multi-exon	TRUE	canonical	3	495	junction_4	187.27302929146	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACTCCTTTAAG	-1	True	NA	NA	False	AATATA	-23	NA	1049119	1039418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1043998_1044172_1048863
transcript_20044.known	chr10	-	1066	4	FSM	ENSG00000067064.12	ENST00000491735.1	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_3	301.602755660856	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACATACTTATGGGAAA	7602	False	NA	-12	True	AATAAA	-19	NA	1049103	1040902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1048863
transcript_20047.known	chr10	+	1101	4	FSM	ENSG00000232656.9	ENST00000428780.3	1101	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTGAATGTCATA	-20	True	NA	NA	False	ATTAAA	-26	NA	1022629	1044207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_1022784_1035813_1035977_1036788_1036894_1043528
transcript_20049.known	chr10	+	5137	14	FSM	ENSG00000047056.17	ENST00000263150.9	5137	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	14.2376282846406	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTCATCCCTCATCA	-17	True	NA	NA	False	ATTAAA	-14	NA	1056384	1132372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_1056969_1072115_1072294_1077906_1078004_1080010_1080107_1080411_1080477_1084402_1084539_1086285_1086358_1093451_1093497_1096169_1096247_1103601_1103837_1105125_1105268_1124217_1124353_1124909_1125025_1129212
transcript_20061.known	chr10	-	3427	27	FSM	ENSG00000107959.17	ENST00000224949.9	3427	27	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	15.7659002111347	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	0	True	NA	-4	True	AATAAA	-18	NA	3172782	3137727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_20067.known	chr10	-	3242	25	FSM	ENSG00000107959.17	ENST00000678436.1	3242	25	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	30.6661005382527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTTAACCTCTGCT	NA	False	NA	-16	True	AATAAA	-6	NA	3172807	3137739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_20069.known	chr10	+	2741	23	FSM	ENSG00000067057.18	ENST00000381075.7	2741	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.953819297199	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGTCCTCTGTTTTAG	912	False	NA	30	True	ATTAAA	-16	NA	3068485	3136798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_3068649_3069273_3069390_3082387_3082462_3099274_3099353_3101364_3101555_3103778_3103945_3105114_3105160_3105392_3105502_3107213_3107310_3108700_3108794_3109354_3109481_3112221_3112287_3113118_3113189_3113371_3113519_3116775_3116847_3118781_3118870_3119891_3120045_3129818_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
transcript_20073.known	chr10	+	2626	22	FSM	ENSG00000067057.18	ENST00000381125.9	2626	22	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	86.885751345362	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCTGTTTTAGTTTT	17	True	NA	34	True	ATTAAA	-20	NA	3067547	3136802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_3067708_3082387_3082462_3099274_3099353_3101364_3101555_3103778_3103945_3105114_3105160_3105392_3105502_3107213_3107310_3108700_3108794_3109354_3109481_3112221_3112287_3113118_3113189_3113371_3113519_3116775_3116847_3118781_3118870_3119891_3120045_3129818_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
transcript_2008.known	chr1	+	12102	6	FSM	ENSG00000196581.11	ENST00000378191.5	12102	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	4.99599839871872	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAAAAGAATTACC	3	True	NA	NA	False	ATTAAA	-32	NA	4654608	4792534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_4655455_4711899_4712700_4769852_4769941_4772279_4772526_4774426_4774559_4782544
transcript_20093.known	chr10	-	3487	27	FSM	ENSG00000107959.17	ENST00000380989.6	3487	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	32.6896831525695	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGCTTGAGTCATTA	NA	False	NA	-6	True	AATAAA	-16	NA	3172841	3137729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148167_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_20094.known	chr10	-	4104	25	FSM	ENSG00000107959.17	ENST00000678539.1	4104	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.2210609235902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGGGCAACTCTGA	NA	False	NA	-29	True	NA	NA	NA	3172806	3137752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147147_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_20096.nic	chr10	-	1630	5	NIC	ENSG00000067082.15	novel	4590	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	89.0505474435727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAAAAC	-4	True	NA	NA	False	AAAAAG	-10	NA	3785234	3779046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_3779591_3780105_3780230_3781640_3782215_3783215_3783282_3784912
transcript_20097.known	chr10	-	4590	4	FSM	ENSG00000067082.15	ENST00000497571.6	4590	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	5.73488351136175	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTACATCTCTTTTT	-3	True	NA	NA	False	AATAAA	-18	NA	3785209	3775995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3779591_3780105_3780230_3781640_3782215_3784912
transcript_20099.known	chr10	-	4537	3	FSM	ENSG00000067082.15	ENST00000542957.1	4537	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGTTACATCTCTTTT	1247	False	NA	NA	False	AATAAA	-17	NA	3785281	3775996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3779591_3781640_3782215_3784912
transcript_20100.nic	chr10	-	2994	3	NIC	ENSG00000067082.15	novel	4590	4	NA	NA	28	0	intron_retention	FALSE	canonical	3	184	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAAAAC	1275	False	NA	NA	False	AAAAAG	-10	NA	3785253	3779046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_3779591_3780105_3782215_3784912
transcript_20101.known	chr10	-	2169	2	FSM	ENSG00000067082.15	ENST00000469435.1	2169	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGCATCCCACCACTG	-7	True	NA	NA	False	NA	NA	NA	3785193	3780326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3782215_3784912
transcript_20102.nic	chr10	+	2360	9	NIC	ENSG00000165568.18	novel	1613	10	NA	NA	-24	-168	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	4.68874983337776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTTTGGTTCCAGG	-4	True	NA	20	True	ATTAAA	-28	NA	4826152	4847128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4839728_4839827_4841784_4841858_4842420_4842505_4845777
transcript_20107.known	chr10	+	844	7	FSM	ENSG00000165568.18	ENST00000532248.5	844	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	5.24139506450546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATTTATCATACACAT	19	False	NA	NA	False	AATATA	-25	NA	4826295	4847296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4842420_4842505_4847147
transcript_20112.known	chr10	+	6543	9	FSM	ENSG00000187134.14	ENST00000380872.9	6543	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	2.3418742493994	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATGTTAAGAGGGTT	-3	True	NA	NA	False	AATAAA	-16	NA	4963414	4983283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_4963529_4965913_4966082_4966926_4967044_4968308_4968387_4968821_4968945_4972200_4972311_4972583_4972750_4975850_4975934_4977699
transcript_20113.known	chr10	-	3756	9	FSM	ENSG00000151632.18	ENST00000380753.9	3215	9	-166	-375	0	375	multi-exon	FALSE	canonical	1	1	junction_6	1.85404962177392	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGCACAAGTGACTC	2058	False	NA	NA	False	TATAAA	-35	NA	5004023	4987399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_4990039_4991830_4991914_4995318_4995485_4995755_4995866_4998624_4998748_4999199_4999278_5000549_5000667_5001513_5001682_5003751
transcript_20114.known	chr10	+	1186	9	FSM	ENSG00000196139.14	ENST00000380554.5	1186	9	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_6	9.75881012214092	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	-6	True	NA	14	True	AATAAA	-21	NA	5094413	5107686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5094529_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_20115.known	chr10	+	3989	12	FSM	ENSG00000173848.19	ENST00000355029.9	3989	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	67.9629213445534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGTGTTTGAGAGCAT	-3	True	NA	NA	False	ATTAAA	-20	NA	5412556	5459056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5412821_5426654_5426722_5429169_5429230_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_20117.known	chr10	+	3253	10	FSM	ENSG00000173848.19	ENST00000380359.3	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	88.6609577666448	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGAAGGTTTCTTGC	-1	True	NA	17	True	ATTAAA	-23	NA	5446610	5458463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_2012.nic	chr1	-	5014	30	NIC	ENSG00000131697.18	novel	5548	33	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_17	12.3988415706826	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCTTGGCAGTTTTCT	NA	False	NA	-12	True	ACTAAA	-11	NA	5992489	5862812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5890867_5891029_5904616_5904805_5905291_5905484_5905631_5905781_5907114_5907223_5909151_5909214_5927648_5927788_5933146_5933330_5947103_5947231_5948069_5948252_5952699_5952837_5961793_5961950_5967298_5967364_5969086_5969260_5978269_5978414_5986154_5986328_5992243
transcript_20121.known	chr10	-	2780	7	FSM	ENSG00000196372.13	ENST00000459912.5	2780	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	37.5484871717742	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGTGTTCACACGACT	-9	True	NA	-12	True	AATAAA	-19	NA	5666578	5638867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5640831_5641769_5641962_5642472_5642554_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_20123.known	chr10	-	2717	6	FSM	ENSG00000196372.13	ENST00000357700.11	2717	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	6.4	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGTTCACACGACTC	10	True	NA	-11	True	AATAAA	-20	NA	5666595	5638866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5640831_5641769_5641962_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_2015.known	chr1	-	4955	30	FSM	ENSG00000131697.18	ENST00000378156.9	4955	30	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_17	12.3988415706826	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTGGCAGTTTTCTTG	17	True	NA	-10	True	ACTAAA	-13	NA	5992425	5862810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5890867_5891029_5904616_5904805_5905291_5905484_5905631_5905784_5907114_5907223_5909151_5909214_5927648_5927788_5933146_5933330_5947103_5947231_5948069_5948252_5952699_5952837_5961793_5961950_5967298_5967364_5969086_5969260_5978269_5978414_5986154_5986328_5992243
transcript_20150.known	chr10	-	2297	11	FSM	ENSG00000057608.17	ENST00000380191.9	2297	11	0	0	0	0	multi-exon	FALSE	canonical	3	1920	junction_7	100.322679390056	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGTGTTGGTTTGTG	-4	True	NA	-5	True	AATAAA	-19	NA	5813434	5765222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5794884_5795020_5796762_5796863_5800597_5800706_5813213
transcript_20158.known	chr10	-	1408	10	FSM	ENSG00000057608.17	ENST00000380181.7	1408	10	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	602.13306023023	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATATAATGAAATCAATA	19	False	NA	60	True	TTTAAA	-14	NA	5813411	5765953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5796762_5796863_5800597_5800706_5813213
transcript_20172.known	chr10	-	918	7	FSM	ENSG00000057608.17	ENST00000456041.5	918	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	748.206021093121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGCTTTTAAAATGA	43	False	NA	16	True	NA	NA	NA	5813387	5773841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5773942_5785141_5785274_5785851_5786051_5794884_5794990_5796762_5796863_5800597_5800706_5813213
transcript_20173.known	chr10	-	2734	8	FSM	ENSG00000134461.16	ENST00000380094.10	2734	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	31.1814963445585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCAGAGTCGTCAGATG	-11	True	NA	NA	False	AATAAA	-33	NA	5889893	5861615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5862692_5878096_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
transcript_20179.known	chr10	-	1646	7	FSM	ENSG00000134461.16	ENST00000380092.8	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	13.4742552876052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTCTTAAGTCAGTC	11	True	NA	1	True	AATAAA	-18	NA	5889871	5878086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
transcript_20180.known	chr10	-	1567	6	FSM	ENSG00000134461.16	ENST00000191063.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	31.0328857826661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAGGAGGCAATAAAGT	-24	True	NA	-34	True	NA	NA	NA	5889906	5878121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5878288_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
transcript_20183.known	chr10	+	3640	22	FSM	ENSG00000134452.20	ENST00000397269.7	3640	22	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_17	71.2731006431139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGTGTGATGTCTGCG	606	False	NA	9	True	ATTAAA	-22	NA	5890202	5937594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5924750_5924802_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_20187.known	chr10	+	3548	21	FSM	ENSG00000134452.20	ENST00000362091.9	3548	21	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	34.9998571425656	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	0	True	NA	8	True	ATTAAA	-21	NA	5890242	5937593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_20196.nic	chr10	+	3410	20	NIC	ENSG00000134452.20	novel	3548	21	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	49.3604527291719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	-18	True	NA	8	True	ATTAAA	-21	NA	5890224	5937593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_5890347_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_202.known	SIRV6	+	545	4	FSM	SIRV6A	SIRV606	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	14247	junction_1	3623.37635669029	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
transcript_20200.known	chr10	-	1566	7	FSM	ENSG00000134470.21	ENST00000379977.8	1566	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.85287379477061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAATGCATTAAGAG	19	True	NA	NA	False	AATAAA	-17	NA	5977543	5952383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5963742_5963842_5966144_5966340_5977404
transcript_20201.known	chr10	-	1694	7	FSM	ENSG00000134470.21	ENST00000534292.5	1694	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.5603819159562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAAAATGCATTAAG	-9	True	NA	NA	False	AATAAA	-15	NA	5978045	5952385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5963742_5963842_5966144_5966340_5977776
transcript_20203.known	chr10	-	1037	6	FSM	ENSG00000134470.21	ENST00000528354.5	1037	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.92574776766556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACATGTGGTAATGAAA	-8	True	NA	NA	False	NA	NA	NA	5977522	5952792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5966144_5966340_5977404
transcript_20207.known	chr10	+	3275	12	FSM	ENSG00000134453.16	ENST00000379888.9	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_4	80.0434799198907	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTGGCAAGTTTCCGT	-10	True	NA	NA	False	AATAAA	-25	NA	6089033	6117447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6112362_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_20210.nic	chr10	+	2371	12	NIC	ENSG00000134453.16	novel	3275	12	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_8	240.740901838848	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTGTTTCTCTTTT	NA	False	NA	40	True	TATAAA	-33	NA	6088963	6115766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_20216.nic	chr10	+	634	4	ISM	ENSG00000134453.16	ENST00000432931.5	805	7	-107	5014	-70	-1301	5prime_fragment	FALSE	canonical	3	816	junction_2	26.6374840320094	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATAGAAGAAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	6088963	6105076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930
transcript_20218.known	chr10	+	4157	15	FSM	ENSG00000170525.21	ENST00000379789.8	4157	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15.403418650496	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGAAGTAAACCTCTGG	12	True	NA	74	True	AATAAA	-19	NA	6144933	6235532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6145014_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6232894
transcript_20222.known	chr10	+	4482	15	FSM	ENSG00000170525.21	ENST00000379775.9	4482	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	14.5386536164664	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGAAGTAAACCTCTGG	-1	True	NA	74	True	AATAAA	-19	NA	6202931	6235532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6203337_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6232894
transcript_20223.known	chr10	+	2311	15	FSM	ENSG00000170525.21	ENST00000640683.1	2311	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_14	19.5171301001694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTTTATTATAAGATAG	-1	True	NA	NA	False	AATAAA	-16	NA	6202931	6254644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6203337_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6254177
transcript_20233.known	chr10	-	3255	18	FSM	ENSG00000065675.16	ENST00000263125.10	3255	18	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_14	20.1320897589466	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTAATCGTTTAC	-9	True	NA	-10	True	AATAAA	-11	NA	6580276	6427147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_20234.nnic	chr10	-	3360	18	NNC	ENSG00000065675.16	novel	3255	18	NA	NA	-370	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_17	26.6794375417334	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTAATCGTTTAC	NA	False	NA	-10	True	AATAAA	-11	NA	6580671	6427147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580500
transcript_20239.known	chr10	-	3224	17	FSM	ENSG00000065675.16	ENST00000539722.5	3224	17	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	22.127118542639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAATCGTTTACTTCCC	47	False	NA	-5	True	AATAAA	-16	NA	6580301	6427142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6510994_6511195_6515017_6515145_6580210
transcript_20240.known	chr10	-	3096	17	FSM	ENSG00000065675.16	ENST00000397176.6	3096	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	30.5173490616403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAATCGTTTACTTCCC	47	False	NA	-5	True	AATAAA	-16	NA	6580301	6427142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_6428363_6430809_6430939_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_20242.nic	chr10	-	2632	17	ISM	ENSG00000065675.16	ENST00000263125.10	3255	18	-148	3218	-123	-3218	5prime_fragment	FALSE	canonical	1	32	junction_13	20.1283964525245	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACGACATTTCCTAAGG	NA	False	NA	-16	True	ATTAAA	-19	NA	6580424	6430365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_20245.nic	chr10	-	2428	16	ISM	ENSG00000065675.16	ENST00000263125.10	3255	18	-76	14304	-51	-14304	5prime_fragment	FALSE	canonical	1	32	junction_12	20.7229341551818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCATTTAGGCTGGGTGC	-4	True	NA	NA	False	AATAAA	-24	NA	6580352	6441451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_20251.known	chr10	+	1263	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	6	False	NA	NA	False	AAAAAG	-28	NA	6580561	6584508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6580928_6582137_6582202_6583675
transcript_20253.known	chr10	+	1254	2	FSM	ENSG00000237943.8	ENST00000667809.1	1254	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCTCCTCTTGGGGAG	0	True	NA	NA	False	NA	NA	NA	6580555	6584557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6580928_6583675
transcript_20257.known	chr10	+	2529	2	FSM	ENSG00000223784.2	ENST00000650334.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTTTACTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	6737275	6740532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6737629_6738356
transcript_20260.known	chr10	-	8056	21	FSM	ENSG00000198879.13	ENST00000397167.6	8056	21	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	4.16263137930805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGGGTCTTTG	-14	True	NA	NA	False	AATAAA	-17	NA	7411034	7158623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7163911_7170927_7171057_7171894_7172159_7172494_7172662_7175989_7176166_7188623_7188734_7197547_7197688_7200413_7200485_7202479_7202523_7205814_7205929_7220410_7220538_7227854_7227938_7243557_7243706_7248547_7248650_7276891_7276990_7283903_7284151_7285865_7285955_7367648_7367890_7370280_7370376_7381798_7381950_7410860
transcript_20262.known	chr10	-	798	4	FSM	ENSG00000198879.13	ENST00000682043.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTGCATTTTCAGATG	14	True	NA	NA	False	NA	NA	NA	7411006	7367483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7367890_7370280_7370376_7381798_7381950_7410860
transcript_20263.known	chr10	-	6716	14	FSM	ENSG00000123243.15	ENST00000397146.7	6716	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	4.88567523329244	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTTTGTAGGCATTT	-1	True	NA	NA	False	AATAAA	-21	NA	7666966	7559269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7563385_7566029_7566408_7569667_7569785_7573141_7573196_7576452_7577013_7579754_7580065_7585900_7586070_7615981_7616099_7617112_7617283_7637227_7637479_7640753_7640856_7641926_7642091_7655630_7655676_7666802
transcript_20270.known	chr10	-	6360	13	FSM	ENSG00000151657.12	ENST00000379562.9	6360	13	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_12	18.4185519397035	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATTACTCAGAAATGG	-20	True	NA	2	True	AATAAA	-21	NA	7787993	7750961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_20273.nic	chr10	-	845	8	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-11	18278	-11	-8007	5prime_fragment	FALSE	canonical	3	164	junction_7	20.071301473924	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTGGATGAAATCAT	NA	False	NA	-24	True	AAAAAG	-4	NA	7788004	7769239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_20275.nic	chr10	-	664	6	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-11	24803	-11	-14532	5prime_fragment	FALSE	canonical	3	164	junction_5	22.8613210466937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGAAGAGAAAGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	7788004	7775764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_20282.known	chr10	+	1101	10	FSM	ENSG00000165629.20	ENST00000356708.12	1101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	806.838549180965	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	1	True	NA	NA	False	AATAAA	-16	NA	7788176	7807801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_20289.known	chr10	+	1078	9	FSM	ENSG00000165629.20	ENST00000335698.4	1078	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1108.00450557523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATAAGAACAATAGATA	1	True	NA	NA	False	AATAAA	-30	NA	7788176	7807815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7807658
transcript_20292.known	chr10	+	1096	9	FSM	ENSG00000165629.20	ENST00000493053.5	1096	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1063.86168626377	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	42	False	NA	NA	False	AATAAA	-16	NA	7788146	7807801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7788264_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_20297.known	chr10	+	4875	7	FSM	ENSG00000165632.9	ENST00000344293.6	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.67646212197547	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	-11	True	NA	10	True	AATAAA	-20	NA	7818504	8016631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7818876_7824317_7824561_7963919_7965743_7977240_7977324_8009077_8009331_8013730_8013838_8014636
transcript_20300.nic	chr10	+	2649	6	NIC	ENSG00000107485.18	novel	895	3	NA	NA	-291	-351	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	54.8729441528336	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTGTAGGCGAATC	-2	True	NA	NA	False	AATAAA	-31	NA	8045086	8074539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_8045516_8055286_8055897_8058304_8058842_8063992_8064139_8069472_8069599_8073738
transcript_20304.nic	chr10	+	2377	6	NIC	ENSG00000107485.18	novel	975	3	NA	NA	18	-351	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	56.0178542966437	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTGTAGGCGAATC	1522	False	NA	NA	False	AATAAA	-31	NA	8053621	8074539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_8053779_8055286_8055897_8058304_8058842_8063992_8064139_8069472_8069599_8073738
transcript_20307.known	chr10	+	2650	6	FSM	ENSG00000107485.18	ENST00000346208.4	2650	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	43.0655314607866	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTGGTTGTGCTCGGA	-7	True	NA	21	True	AATAAA	-21	NA	8054809	8074890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_8054892_8055286_8055897_8058304_8058842_8063995_8064139_8069472_8069599_8073738
transcript_20311.known	chr10	+	7982	14	FSM	ENSG00000048740.19	ENST00000542579.5	7982	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	35.2344640319858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAGTTCTCCGGAGT	13	True	NA	NA	False	AATAAA	-11	NA	11017929	11336667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_20312.nic	chr10	+	2599	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	19.6718643885299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATACAAAAAAAAAAAAAAG	0	True	NA	16	True	NA	NA	NA	11017916	11331277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_20315.known	chr10	+	8044	14	FSM	ENSG00000048740.19	ENST00000417956.6	8044	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.9475346095741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCGGAGTGCATTTTA	56	False	NA	NA	False	AATAAA	-19	NA	11165029	11336675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_20316.known	chr10	+	1892	14	FSM	ENSG00000048740.19	ENST00000608830.5	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	37.7641387762887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAAGTCAATGTGAAA	11	False	NA	NA	False	NA	NA	NA	11165139	11330639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_20324.known	chr10	-	11377	15	FSM	ENSG00000148429.15	ENST00000609104.6	4709	15	-104	-6564	-88	6564	multi-exon	FALSE	canonical	3	153	junction_9	19.3975592826121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTACGTATGTGAACATC	31	False	NA	NA	False	TATAAA	-19	NA	11611754	11453945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_11463850_11481769_11481923_11484970_11485071_11485168_11485235_11485816_11485912_11489101_11489223_11490831_11490881_11493118_11493229_11501100_11501209_11509594_11509676_11518534_11518575_11525385_11525469_11527499_11527568_11597630_11597718_11611442
transcript_20333.known	chr10	-	1823	3	FSM	ENSG00000148429.15	ENST00000606752.1	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	92.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATGGAGCGCTTTTA	119	False	11611691	-3	True	AATAAA	-15	NA	11611666	11564126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_11565639_11597630_11597718_11611442
transcript_20337.known	chr10	+	1633	5	FSM	ENSG00000134463.15	ENST00000379215.9	1633	5	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_4	31.9403741368194	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATGTTTTATCTCCCC	-24	True	NA	13	True	AATAAA	-18	NA	11742381	11764070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407_11755609_11763223
transcript_20339.nic	chr10	+	3118	4	ISM	ENSG00000134463.15	ENST00000379215.9	1633	5	-40	6170	-24	2170	5prime_fragment	FALSE	canonical	3	238	junction_3	16.1314048434171	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTTGTCTTTGCTG	NA	False	NA	7	True	AATAAA	-15	NA	11742341	11757900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407
transcript_20340.nnic	chr10	+	1468	4	NIC	ENSG00000134463.15	novel	1633	5	NA	NA	-24	-4	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	109.044333491781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGGTATGTTTTATCT	NA	False	NA	9	True	AATAAA	-14	NA	11742341	11764066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_11742747_11747348_11747471_11749494_11749593_11763223
transcript_20341.known	chr10	+	854	4	FSM	ENSG00000134463.15	ENST00000420401.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	114.770302004579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCAAGAGCAGTGCC	40	True	NA	NA	False	NA	NA	NA	11742445	11755581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11742906_11747348_11747471_11749494_11749593_11755407
transcript_20344.nnic	chr10	+	1912	5	NNC	ENSG00000148426.13	novel	1646	5	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.5975916766053	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTCATTTTTTAAT	-27	True	NA	3	True	AATAAA	-7	NA	11823353	11870862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_11823471_11851996_11852216_11866530_11866784_11869489_11870051_11870100
transcript_20346.known	chr10	+	3375	4	FSM	ENSG00000148426.13	ENST00000277570.10	3375	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	14.0791413879619	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTGTTTTTGCATTG	-25	True	NA	6	True	AATAAA	-20	NA	11823355	11872277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11823471_11851996_11852216_11866530_11866784_11869489
transcript_20348.known	chr10	-	5168	22	FSM	ENSG00000151461.20	ENST00000357604.10	5168	22	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_17	18.3540390186825	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCGTGGTGTTGTTT	-8	True	NA	-5	True	AATAAA	-14	NA	12042809	11920021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042754
transcript_20349.nic	chr10	-	456	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-95	115114	-95	-77	5prime_fragment	FALSE	canonical	3	218	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCAAGAGGAAGAGAGAAA	329	False	NA	-4	True	AAAAAG	-21	NA	12042904	12035135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_12035442_12042754
transcript_20350.known	chr10	-	640	2	FSM	ENSG00000151461.20	ENST00000460569.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGTTGATTGTATT	63	False	NA	0	True	NA	NA	NA	12043170	12035058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12035442_12042913
transcript_20351.nic	chr10	-	393	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-95	115177	-95	-140	5prime_fragment	FALSE	canonical	3	218	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAGAAAAGGTGAAGGC	329	False	NA	39	True	AAAAAG	-25	NA	12042904	12035198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_12035442_12042754
transcript_20355.known	chr10	+	5173	17	FSM	ENSG00000181192.12	ENST00000263035.9	5173	17	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	17.2898091371767	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACTCCTGGACTTCT	0	True	NA	21	True	AATAAA	-22	NA	12068953	12123221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_20363.nnic	chr10	+	3072	16	NIC	ENSG00000181192.12	novel	5173	17	NA	NA	-47	879	combination_of_known_splicesites	TRUE	canonical	3	29	junction_12	52.3713237903679	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTAAAAGAGGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	12068906	12121238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_20369.nnic	chr10	+	2967	16	NIC	ENSG00000181192.12	novel	5173	17	NA	NA	-47	879	combination_of_known_splicesites	FALSE	canonical	2	15	junction_4	55.479485698169	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTAAAAGAGGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	12068906	12121238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_2037.nnic	chr1	-	2803	15	NNC	ENSG00000131697.18	novel	5548	33	NA	NA	8457	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	14.4504784187449	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCTTGGCAGTTTTCT	NA	False	NA	-12	True	ACTAAA	-11	NA	5896867	5862812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5890867_5891029_5896654
transcript_2039.nnic	chr1	-	2654	14	NNC	ENSG00000131697.18	novel	5548	33	NA	NA	8445	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	14.4094807711685	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCTTGGCAGTTTTCT	NA	False	NA	-12	True	ACTAAA	-11	NA	5896879	5862812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5896654
transcript_20390.known	chr10	+	2495	12	FSM	ENSG00000065665.21	ENST00000298428.14	2495	12	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	12.2332699047304	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTAAGATCATTTGT	-5	True	NA	5	True	AATAAA	-17	NA	12129676	12165407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12164267
transcript_20392.known	chr10	+	2030	12	FSM	ENSG00000065665.21	ENST00000304267.12	2030	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	44.3649403683167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTGTCTGCTTCTTTC	19	True	NA	NA	False	AATAAA	-14	NA	12129700	12169956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12169257
transcript_20397.known	chr10	-	917	11	FSM	ENSG00000165609.13	ENST00000378952.7	917	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	529.225056096175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGACCACCAGGCCTTCT	9	True	NA	-109	True	NA	NA	NA	12195860	12167671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12180394_12180490_12184888_12184957_12186228_12186333_12195769
transcript_204.known	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_9000_11000
transcript_20403.known	chr10	-	1201	10	FSM	ENSG00000165609.13	ENST00000537776.5	1201	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	427.931141339813	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTGGTGGTATGGA	-31	True	NA	-14	True	AATAAA	-11	NA	12196144	12167576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170913_12172768_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_20405.known	chr10	-	1126	10	FSM	ENSG00000165609.13	ENST00000378940.7	1126	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	426.886690953911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGTGATTTCTTTGG	0	True	NA	-45	True	NA	NA	NA	12195869	12169721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12170157_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_20412.known	chr10	+	1321	13	FSM	ENSG00000151465.14	ENST00000281141.9	1321	13	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_7	193.290135260155	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	-20	True	NA	52	True	AATAAA	-18	NA	12196187	12250589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
transcript_20413.known	chr10	+	564	8	FSM	ENSG00000151465.14	ENST00000442050.5	564	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	927.51275913992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCAAGAAACACATACAG	24	True	NA	NA	False	AAGAAA	-22	NA	12196231	12237224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12217360_12217468_12230947_12230997_12235047_12235124_12237143
transcript_20415.known	chr10	-	2747	3	FSM	ENSG00000151468.11	ENST00000378825.5	2747	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAGATGATGAGTGTTT	-1	True	NA	-1	True	AATAAA	-25	NA	13001713	12896624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12898680_12998337_12998513_13001196
transcript_20416.known	chr10	+	3488	16	FSM	ENSG00000123240.17	ENST00000378752.7	3488	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	45.8255629776899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	38	True	NA	7	True	ATTAAA	-2	NA	13100172	13138291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_20417.known	chr10	+	3479	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	39.3132371122615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	28	True	NA	24	True	ATTAAA	-19	NA	13100162	13138308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_20419.known	chr10	+	3321	14	FSM	ENSG00000123240.17	ENST00000378757.6	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	22.5060149750944	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	34	True	NA	24	True	ATTAAA	-19	NA	13100168	13138308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_20424.known	chr10	+	511	3	FSM	ENSG00000123240.17	ENST00000487935.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	24	True	NA	NA	False	NA	NA	NA	13100158	13109662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13109111_13109289_13109472
transcript_20425.known	chr10	+	3157	20	FSM	ENSG00000065328.17	ENST00000484800.6	3157	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	56.0913382541976	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCAGTTTTCTCATCTG	13	True	NA	-92	True	NA	NA	NA	13161578	13209736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172624_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
transcript_20432.nic	chr10	+	2451	17	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-34	9635	-34	-397	5prime_fragment	FALSE	canonical	3	211	junction_4	34.4129336151395	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAAAGATGAGAAAC	NA	False	NA	NA	False	AAAAAG	-7	NA	13161523	13201475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420
transcript_20433.nic	chr10	+	2310	16	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-34	12389	-34	3141	5prime_fragment	FALSE	canonical	3	211	junction_4	35.5415250094871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAACAACTTGCCTAT	NA	False	NA	NA	False	NA	NA	NA	13161523	13198721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688
transcript_20436.nic	chr10	+	2212	15	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-34	13408	-34	2122	5prime_fragment	TRUE	canonical	3	211	junction_4	36.4115506454774	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCAGGACATCCTGG	NA	False	NA	25	True	AAGAAA	-6	NA	13161523	13197702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622
transcript_20441.nic	chr10	+	370	3	ISM	ENSG00000065328.17	ENST00000484800.6	3157	20	-55	38610	-34	-1348	5prime_fragment	FALSE	canonical	3	229	junction_1	71.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATCTGGCCACTCTCT	NA	False	NA	NA	False	NA	NA	NA	13161523	13171126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921
transcript_20442.nic	chr10	+	646	3	ISM	ENSG00000065328.17	ENST00000484800.6	3157	20	-55	38334	-34	-1072	5prime_fragment	FALSE	canonical	3	229	junction_1	71.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATGAGTTGGTAGATGA	NA	False	NA	NA	False	GATAAA	-34	NA	13161523	13171402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921
transcript_20444.known	chr10	-	870	5	FSM	ENSG00000165623.10	ENST00000378681.8	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.9749371855331	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTATTATCTTCTCAA	-1	True	NA	-4	True	AATAAA	-15	NA	13234374	13221765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13222201_13229610_13229710_13233537_13233634_13233734_13233801_13234200
transcript_20445.known	chr10	-	1541	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	33.6414922380087	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-3	True	NA	-7	True	AATAAA	-20	NA	13300064	13277798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_20454.known	chr10	-	3265	9	FSM	ENSG00000086475.15	ENST00000327347.10	3265	9	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_8	306.489294266537	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	0	True	NA	-21	True	AATAAA	-29	NA	13348293	13317427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_20462.known	chr10	-	2988	8	FSM	ENSG00000086475.15	ENST00000545675.5	2988	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	1170.8314157391	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGATAAACCTACTGTT	-5	True	NA	-32	True	AATAAA	-18	NA	13348298	13317438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13347999
transcript_20464.known	chr10	-	2387	8	FSM	ENSG00000086475.15	ENST00000378614.8	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1178.32149730895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	13	True	NA	-18	True	AATAAA	-17	NA	13348280	13318079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13319357_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_20472.known	chr10	-	2731	3	FSM	ENSG00000151474.23	ENST00000492155.5	2731	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	13707757	13692168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13694040_13701339_13701479_13707036
transcript_20477.known	chr10	+	1670	10	FSM	ENSG00000165630.14	ENST00000378572.8	1670	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	14.4666495988976	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGTATAACTCAAATG	-8	True	NA	3	True	AATAGA	-19	NA	13586964	13630859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397_13616554_13630259
transcript_20483.known	chr10	-	2633	4	FSM	ENSG00000065809.14	ENST00000468747.5	2633	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	13.0979218029257	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTTAAGAAAGCATTTC	1008	False	NA	NA	False	NA	NA	NA	14604389	14519158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14521307_14521868_14522020_14530331_14530516_14604239
transcript_20485.known	chr10	+	1762	14	FSM	ENSG00000187522.16	ENST00000378372.8	1762	14	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_5	45.1892797676303	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCAACCCTTTGTTTT	-12	True	NA	24	True	ATTAAA	-18	NA	14838305	14871741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849720_14849812_14851218_14851324_14852369_14852532_14854124_14854281_14855840_14855944_14867082_14867296_14867735_14867910_14870596_14870668_14871527
transcript_20488.known	chr10	+	4660	5	FSM	ENSG00000284024.4	ENST00000640019.3	4660	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	190.42895656911	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGGTCAGTCCACTAC	-12	True	NA	18	True	AATAAA	-18	NA	14838305	14846999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14842133_14842847_14843370
transcript_20489.known	chr10	-	999	1	FSM	ENSG00000272853.1	ENST00000609399.1	999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAGCCGTCTTAAA	15	False	14878701	NA	False	ATTAAA	-33	NA	14878686	14877687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14877700_14878700
transcript_20490.known	chr10	-	2463	15	FSM	ENSG00000152457.18	ENST00000378258.5	2463	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	9.63332862556672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	15	True	NA	NA	False	NA	NA	NA	14954072	14908170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_20493.known	chr10	-	5960	14	FSM	ENSG00000152457.18	ENST00000378278.7	5960	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	7.06688250944975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTACTGAAAATAGTC	-9	True	NA	NA	False	AATAAA	-16	NA	14954096	14904612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_20495.known	chr10	-	2637	13	FSM	ENSG00000152457.18	ENST00000378246.6	2637	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	9.91071249821234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	14954095	14907878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_20497.known	chr10	-	2246	12	FSM	ENSG00000152457.18	ENST00000378249.5	2246	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	12.5296342938328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-1	True	NA	NA	False	NA	NA	NA	14954048	14908170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14953901
transcript_20498.known	chr10	+	1292	6	FSM	ENSG00000152455.16	ENST00000378325.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	76.9716831048925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	-3	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_20499.known	chr10	+	3059	6	FSM	ENSG00000152455.16	ENST00000354919.11	3059	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	70.9608342679256	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	0	True	NA	NA	False	NA	NA	NA	14878865	14904315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_205.known	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_-_1500_1800
transcript_20500.nic	chr10	+	1910	6	NIC	ENSG00000152455.16	novel	3059	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	86.4050924425175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	25	False	NA	9	True	ATTAAA	-9	NA	14878825	14903085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_14878961_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_20503.known	chr10	+	2959	5	FSM	ENSG00000152455.16	ENST00000378331.5	2959	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	36.0442436458306	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	19	False	NA	NA	False	NA	NA	NA	14878819	14904315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14878920_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_20509.known	chr10	-	3370	4	FSM	ENSG00000176244.7	ENST00000356189.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-1	True	NA	-3	True	ATTAAA	-21	NA	15088776	15075474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15078604_15078690_15078754_15078922_15079041_15088716
transcript_20511.known	chr10	-	2457	13	FSM	ENSG00000152465.18	ENST00000378150.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	25.3227774060342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCTGAGAGG	7	True	NA	NA	False	NA	NA	NA	15168628	15108293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
transcript_20515.known	chr10	-	5003	12	FSM	ENSG00000152465.18	ENST00000378165.9	5003	12	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_4	8.96826360373711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAGTTTCTTGTAGATT	-6	True	NA	NA	False	ATTAAA	-45	NA	15168693	15105769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_2052.known	chr1	+	4302	16	FSM	ENSG00000069424.16	ENST00000378097.6	4302	16	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	15.4939414682715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTCCTCTCATTTC	778	False	NA	27	True	AATAAA	-29	NA	5992261	6101193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_5992789_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_20523.known	chr10	+	1296	3	FSM	ENSG00000152464.15	ENST00000378203.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	36.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	-11	True	NA	8	True	AATAAA	-15	NA	15097179	15104251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097410_15102217_15102337_15103304
transcript_20526.known	chr10	+	1484	3	FSM	ENSG00000152464.15	ENST00000378197.5	1484	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	45	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATAGGGTCCTGTTTGGT	-11	True	NA	14	True	AATAAA	-21	NA	15097354	15104257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097767_15102217_15102337_15103304
transcript_20529.known	chr10	+	1030	2	FSM	ENSG00000152464.15	ENST00000378202.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATAGGGTCCTGTTTG	83	False	NA	12	True	AATAAA	-19	NA	15097330	15104255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097410_15103304
transcript_20532.known	chr10	+	863	2	FSM	ENSG00000152464.15	ENST00000441850.1	863	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTCATTGGCTTAAAAT	19	False	NA	NA	False	NA	NA	NA	15097419	15103820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097767_15103304
transcript_20535.known	chr10	-	1714	2	FSM	ENSG00000176236.6	ENST00000624760.1	1714	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTAGTGCTTGTGTTT	324	False	NA	NA	False	AATAAA	-19	NA	15097319	15095384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15096866_15097086
transcript_20536.nic	chr10	-	279	2	ISM	ENSG00000152465.18	ENST00000378150.1	2457	13	-96	33207	-31	-8684	5prime_fragment	FALSE	canonical	3	76	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAACCAAATTCCGGAG	-7	False	NA	NA	False	AAAAAG	-27	NA	15168724	15141500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_15141558_15168502
transcript_20537.known	chr10	-	4182	8	FSM	ENSG00000148468.17	ENST00000378116.9	4182	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	14.8103659230794	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTGTGGTCATTTGA	-22	True	NA	-4	True	AATAAA	-19	NA	15371289	15211642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15214602_15215995_15216111_15220943_15221061_15248638_15248816_15254720_15254880_15275854_15275948_15283877_15284106_15370955
transcript_2054.known	chr1	+	2134	16	FSM	ENSG00000069424.16	ENST00000428161.6	2134	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	14.6872582722425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGGAATCTGGGGCCT	26	False	NA	NA	False	NA	NA	NA	6026012	6099119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6026446_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_20546.known	chr10	-	2364	15	FSM	ENSG00000148481.14	ENST00000277632.8	2364	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_11	13.2003787824441	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	-18	True	NA	-4	True	AATAAA	-16	NA	15860507	15778173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_2055.known	chr1	+	3878	15	FSM	ENSG00000069424.16	ENST00000666163.1	3878	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	11.1458329359781	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTTTTTGCTCCTCTC	341	False	NA	22	True	AATAAA	-24	NA	5992638	6101188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_20554.known	chr10	+	3777	6	FSM	ENSG00000165983.15	ENST00000378000.5	3777	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0724932822114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATCTAAATGTATT	12	False	NA	NA	False	AATAAA	-15	NA	16436983	16513737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_16437048_16437356_16437491_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_20557.known	chr10	+	3625	5	FSM	ENSG00000165983.15	ENST00000535784.7	3625	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.8857705285386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	1	True	NA	NA	False	AATAAA	-23	NA	16437009	16513745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_16437048_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_20559.known	chr10	-	3730	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_7	75.5033111856692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTCATGGTATATT	-25	True	NA	1	True	ATTAAA	-24	NA	16817424	16590610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
transcript_20564.known	chr10	-	955	8	FSM	ENSG00000148484.18	ENST00000377911.1	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_7	173.368311489071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGCTGCGTGTGAGGC	73	False	NA	-24	True	AATAAA	-1	NA	16817463	16593312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
transcript_2057.known	chr1	+	4001	15	FSM	ENSG00000069424.16	ENST00000352527.6	4001	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.50724750398562	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGGTCTCTGTGACTTTT	176	False	NA	12	True	AATAAA	-14	NA	6026162	6101178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_20571.known	chr10	-	8230	12	FSM	ENSG00000107614.22	ENST00000354631.7	8230	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	82.1249803451679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGACAAAAGGTTCAGG	-12	True	NA	NA	False	AATAAA	-10	NA	17201672	17142253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17169309_17169540_17174550_17174661_17201570
transcript_20573.known	chr10	-	12918	11	FSM	ENSG00000107614.22	ENST00000377799.8	12918	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	33.6881284728018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGTCAAGGACTTCG	-12	True	NA	NA	False	AATAAA	-20	NA	17201672	17137335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
transcript_20582.known	chr10	-	1374	9	FSM	ENSG00000107614.22	ENST00000495022.5	1374	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	93.0751544452116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGGATTTTATTAAA	NA	False	NA	-45	True	ACTAAA	-24	NA	17201851	17148915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17162165_17162238_17174550_17174661_17201570
transcript_2059.known	chr1	+	1336	4	FSM	ENSG00000069424.16	ENST00000435937.6	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	18.6964048831735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATACAAAAATTAGCT	2	True	NA	NA	False	NA	NA	NA	5992684	6074791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732
transcript_20592.nic	chr10	-	1097	2	ISM	ENSG00000107614.22	ENST00000479046.1	711	3	279	1861	76	-1861	5prime_fragment	FALSE	canonical	3	237	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTTTCTCCTAATT	NA	False	NA	NA	False	AAAAAG	-4	NA	17201775	17173768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_17174661_17201570
transcript_20594.known	chr10	-	918	3	FSM	ENSG00000229124.8	ENST00000605833.2	1901	3	33	950	33	-864	multi-exon	FALSE	canonical	2	5	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTAGAAATTCCAACT	-13	True	NA	NA	False	NA	NA	NA	17229985	17215195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17215365_17216166_17216275_17229344
transcript_20595.known	chr10	-	1739	9	FSM	ENSG00000148488.17	ENST00000648997.1	1739	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.71046189025021	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTATGCCTGCTTCTGAT	479	False	NA	NA	False	AAAAAG	-40	NA	17454196	17320345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17321347_17323064_17323158_17327013_17327127_17331407_17331553_17359513_17359601_17379356_17379426_17390530_17390621_17453558_17453658_17454154
transcript_206.known	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_-_2400_2500
transcript_20600.known	chr10	-	2234	7	FSM	ENSG00000165996.14	ENST00000361271.8	2234	7	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_3	18.3363633859668	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCATAACTGCCTT	6	True	NA	NA	False	AATAAA	-39	NA	17617374	17589031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17590447_17594204_17594384_17599289_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_20606.known	chr10	-	717	5	FSM	ENSG00000165996.14	ENST00000466335.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	17.4427635425124	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTGAGACAAATTGTG	145	False	NA	-2	True	AATAAA	-15	NA	17617235	17599073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_2061.known	chr1	+	3981	18	FSM	ENSG00000158286.13	ENST00000377939.5	3981	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.04862553408234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGAATAATTACTCCGT	8	True	NA	NA	False	AATAAA	-18	NA	6206118	6221299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6206303_6206535_6206727_6207378_6207512_6208880_6209026_6209114_6209197_6209267_6209344_6209413_6209540_6209923_6209971_6210222_6210296_6210369_6210439_6210869_6210939_6211020_6211119_6211866_6212054_6212230_6212417_6212681_6212734_6213065_6213184_6218288_6218370_6219235
transcript_20615.known	chr10	-	1434	2	FSM	ENSG00000165996.14	ENST00000632169.1	1434	2	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTATATC	6	True	NA	NA	False	NA	NA	NA	17617374	17602905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17604048_17617082
transcript_20617.known	chr10	-	773	2	FSM	ENSG00000165996.14	ENST00000326961.6	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTATTATGTGCT	13	True	NA	NA	False	AATAAA	-17	NA	17617367	17615476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17615965_17617082
transcript_20618.known	chr10	+	3856	14	FSM	ENSG00000136738.15	ENST00000377524.8	3856	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	18.8808158483841	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTGTTAGTTTAT	-15	True	NA	NA	False	TATAAA	-26	NA	17644150	17716824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221_17693313_17695048_17695242_17696774_17696870_17700190_17700280_17704430_17704519_17704969_17705025_17705587_17705742_17708775_17708952_17714542
transcript_20626.known	chr10	+	4385	13	FSM	ENSG00000165995.23	ENST00000617363.4	4385	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.8151743807532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAACAAA	37	False	NA	NA	False	NA	NA	NA	18260768	18541862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_18261318_18401923_18402044_18498354_18498478_18500811_18500949_18506470_18506548_18514979_18515042_18518335_18518417_18518909_18518969_18527587_18527698_18534075_18534228_18536100_18536197_18538179_18538366_18539229
transcript_20627.known	chr10	+	497	2	FSM	ENSG00000165995.23	ENST00000468177.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTTTTTTTTTTTCA	-30	True	NA	NA	False	NA	NA	NA	18140746	18151269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_18140857_18150882
transcript_20631.known	chr10	-	2166	11	FSM	ENSG00000241058.4	ENST00000377304.7	2166	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	13.1011449881299	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTATGAAAAGTTGTT	26	True	NA	-10	True	AATAAA	-15	NA	18651587	18545560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
transcript_20634.known	chr10	+	7170	6	FSM	ENSG00000165997.5	ENST00000377275.4	7170	6	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_3	28.0042853863476	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTGAATCCAGTGTTTT	-5	True	NA	18	True	AATAAA	-18	NA	18659430	18681639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_18659684_18666574_18666636_18668529_18668678_18672621_18672706_18673983_18674136_18675167
transcript_20640.known	chr10	+	12275	14	FSM	ENSG00000120594.17	ENST00000377252.5	12275	14	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	19.6938100388461	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTGTCTTTATG	-1	True	NA	36	True	ATTAAA	-41	NA	19816431	20289856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467_20164568_20176998_20177095_20177327_20177410_20211668_20211730_20217425_20217577_20219063_20219103_20245344_20245506_20279702
transcript_20646.known	chr10	-	3008	7	FSM	ENSG00000078114.19	ENST00000417816.2	3008	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	9.89388138643722	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAACTAGAGACTTCTT	198	False	NA	NA	False	AATAAA	-7	NA	21174187	20783905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_20785924_20787201_20787309_20812768_20812941_20961671_20961780_21020116_21020202_21172382_21172478_21173764
transcript_20651.known	chr10	-	3799	2	FSM	ENSG00000204682.8	ENST00000658000.1	3799	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTCTTTGTGATTAAA	14	True	NA	-4	True	AATAAA	-21	NA	21497260	21492657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_21495946_21496749
transcript_20662.known	chr10	+	5143	23	FSM	ENSG00000078403.17	ENST00000307729.12	5143	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	26.6040759941805	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	-12	True	NA	15	True	AATAAA	-19	NA	21534231	21743630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
transcript_20664.known	chr10	-	2100	12	FSM	ENSG00000136770.11	ENST00000376980.8	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	19.2731560844234	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-16	True	NA	-11	True	AATAAA	-15	NA	22003730	21756547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882440_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_20668.nic	chr10	-	1098	7	ISM	ENSG00000136770.11	ENST00000376980.8	2100	12	-39	148031	0	15310	5prime_fragment	FALSE	canonical	3	144	junction_2	17.8551268703293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGATTGAAGGAAAAGGAA	NA	False	NA	-57	True	TATAAA	-5	NA	22003769	21904578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_20669.nnic	chr10	-	1106	5	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	53436	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	79.4638282490845	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	NA	False	NA	-11	True	AATAAA	-15	NA	21807470	21756547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21807190
transcript_20672.nic	chr10	-	872	4	ISM	ENSG00000136770.11	ENST00000376980.8	2100	12	-39	164250	0	-188	5prime_fragment	FALSE	canonical	3	151	junction_3	15.3260852434302	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGTTAGTAATAAATC	NA	False	NA	NA	False	AAAACA	-5	NA	22003769	21920797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_21920964_21928505_21928553_21929039_21929142_22003212
transcript_20673.known	chr10	-	1013	3	FSM	ENSG00000136770.11	ENST00000376946.2	1013	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGTGGCACTTAAG	NA	False	NA	NA	False	AAGAAA	-13	NA	22003769	21920609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_21920964_21929039_21929142_22003212
transcript_20674.known	chr10	+	3540	10	FSM	ENSG00000168283.14	ENST00000376663.8	3540	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	7.14056400580428	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTGAATTTAACTCAT	12	True	NA	6	True	AGTAAA	-20	NA	22321098	22331484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_22321697_22326430_22326562_22326889_22326987_22327594_22327651_22327741_22327793_22327949_22328059_22328133_22328180_22328599_22328699_22329047_22329129_22329212
transcript_20675.known	chr10	+	926	8	FSM	ENSG00000148444.16	ENST00000376836.8	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	3.22616851161035	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	-22	True	NA	13	True	AATAAA	-22	NA	22316387	22320306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318652_22318714_22318805_22318863_22318958_22319019_22319938
transcript_20677.known	chr10	+	2568	11	FSM	ENSG00000077327.16	ENST00000376624.8	2568	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.28254244210267	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATTGTCCTTTTCATT	4	True	NA	6	True	AATAAA	-20	NA	22345495	22417610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_22345637_22345722_22345819_22364852_22365020_22368494_22368679_22386753_22386960_22387822_22387997_22389159_22389313_22391728_22391921_22401160_22401278_22411030_22411177_22416618
transcript_20680.known	chr10	+	2479	17	FSM	ENSG00000165309.14	ENST00000409049.7	2479	17	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	2.2220486043289	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGGGAATATTTTATG	19	True	NA	NA	False	AATAAA	-27	NA	22928063	23014489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_22928107_22931995_22932045_22946143_22946262_22955806_22955933_22959069_22959139_22959398_22959575_22961883_22962079_22968305_22968490_22981339_22981493_22981594_22981701_22998147_22998398_23001918_23002056_23003245_23003415_23006883_23006982_23008275_23008375_23008814_23008932_23014099
transcript_20685.known	chr10	+	1730	5	FSM	ENSG00000148450.13	ENST00000376510.8	1730	5	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	7.94905654779232	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTTTGGCTAAGT	2	True	NA	NA	False	AATAAA	-18	NA	23095578	23122013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_23095727_23104143_23104245_23110241_23110319_23119303_23119452_23120757
transcript_20688.nic	chr10	+	3094	12	ISM	ENSG00000120549.18	ENST00000376456.8	3203	13	102	3178	102	-3178	5prime_fragment	FALSE	canonical	2	14	junction_2	7.03356768504898	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAGTCCTATTTCTGTTT	98	False	NA	NA	False	AAGAAA	-42	NA	24208892	24524764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_24209264_24219625_24219910_24380868_24381068_24432994_24433194_24438385_24438480_24473227_24474061_24495146_24495197_24501378_24501546_24513258_24513435_24520122_24520254_24521781_24521930_24524322
transcript_20694.known	chr10	-	7099	25	FSM	ENSG00000107863.20	ENST00000376410.7	7099	25	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_24	16.4568037263889	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGCATGGCTTGAAA	-18	True	NA	-17	True	AATAAA	-13	NA	24723233	24583616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24586107_24589270_24589303_24591224_24591331_24591641_24591684_24591886_24592013_24594949_24595040_24595116_24595191_24595716_24595796_24595887_24596044_24596739_24596883_24597446_24597584_24597944_24598010_24600645_24600931_24601977_24602104_24604311_24604349_24607498_24607602_24607744_24607904_24619472_24621370_24629995_24630051_24633401_24633481_24635010_24635104_24666984_24667010_24670217_24670398_24721836_24722280_24723156
transcript_20697.known	chr10	-	1939	9	FSM	ENSG00000099256.19	ENST00000320152.11	1939	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	10.3319891598859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTACTGTTTTTCT	-15	True	NA	-2	True	AATAAA	-26	NA	24952606	24848613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24849892_24851387_24851465_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_20698.known	chr10	-	747	8	FSM	ENSG00000099256.19	ENST00000376378.5	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	24.6021402752372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTTCTGAGGTTAAT	7	True	NA	NA	False	TATAAA	-26	NA	24952584	24849706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24849892_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_20699.known	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	32.4276973520408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-1	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
transcript_207.known	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	20083	junction_1	2545.79880500317	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
transcript_20700.known	chr10	+	3737	3	FSM	ENSG00000185875.13	ENST00000376356.5	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	2	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	-19	True	NA	NA	False	ATTAAA	-16	NA	25016611	25026664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_25016693_25021741_25021909_25023175
transcript_20702.known	chr10	+	3788	3	FSM	ENSG00000185875.13	ENST00000524413.5	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	27	True	NA	NA	False	ATTAAA	-16	NA	25016657	25026664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_25016790_25021741_25021909_25023175
transcript_20709.known	chr10	+	641	4	FSM	ENSG00000136750.13	ENST00000428517.2	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTTATTTTTTTCT	14	False	NA	NA	False	AATAAA	-20	NA	26216732	26219320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_26216886_26217609_26217670_26217841_26217992_26219042
transcript_20710.known	chr10	-	3576	12	FSM	ENSG00000136754.18	ENST00000376142.6	3576	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	152.595397610481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	10	True	NA	-14	True	AATAAA	-25	NA	26860935	26746592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26763879_26763961_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_20711.known	chr10	-	3515	10	FSM	ENSG00000136754.18	ENST00000376160.5	3515	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	76.6434747530553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	108	False	NA	-14	True	AATAAA	-25	NA	26860973	26746592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_20712.known	chr10	-	3516	10	FSM	ENSG00000136754.18	ENST00000376139.6	3516	10	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	61.9840680446034	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	110	False	NA	-14	True	AATAAA	-25	NA	26860971	26746592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_20713.known	chr10	-	3467	10	FSM	ENSG00000136754.18	ENST00000376137.8	3467	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	154.006333042781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-17	True	AATAAA	-22	NA	26861087	26746595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_20720.known	chr10	-	3441	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	105.91734690314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-3	True	NA	-14	True	AATAAA	-25	NA	26860986	26746592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_20724.nic	chr10	-	2221	9	NIC	ENSG00000136754.18	novel	3503	10	NA	NA	2	-919	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	95.7104193648737	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATGATTCTATTTTCT	-1	True	NA	-12	True	AATAAA	-19	NA	26860984	26747813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_26748746_26751597_26751784_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_20732.nic	chr10	+	1969	12	NIC	ENSG00000148459.16	novel	1584	12	NA	NA	-302	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	24.2609777486876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTCTTGATTTACCG	25	False	NA	13	True	AATAAA	-22	NA	26697398	26746798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_26697841_26702161_26702195_26704676_26704742_26705285_26705395_26709637_26709769_26720134_26720360_26723805_26723918_26724013_26724124_26735239_26735321_26735465_26735580_26742496_26742578_26746332
transcript_20733.known	chr10	+	1584	12	FSM	ENSG00000148459.16	ENST00000376215.10	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	12.1763895638205	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTCTTGATTTACCG	18	True	NA	13	True	AATAAA	-22	NA	26697700	26746798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_26697841_26702161_26702195_26704676_26704742_26705285_26705395_26709637_26709769_26720217_26720360_26723805_26723918_26724013_26724124_26735239_26735321_26735465_26735580_26742496_26742578_26746332
transcript_20743.nic	chr10	-	1828	16	ISM	ENSG00000107890.17	ENST00000436985.7	5564	34	-32	48003	-23	7097	5prime_fragment	FALSE	canonical	3	21	junction_13	5.59603033904888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATATTTTTAAAAATT	-3	True	NA	NA	False	AAGAAA	-32	NA	27100517	27053317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_20746.known	chr10	-	2489	13	FSM	ENSG00000107890.17	ENST00000676299.1	2489	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.5753285797584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	137	False	NA	NA	False	NA	NA	NA	27100377	27063035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27080648_27080772_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_20751.nic	chr10	-	797	4	ISM	ENSG00000107890.17	ENST00000676299.1	2489	13	-140	29402	-23	-15415	5prime_fragment	FALSE	canonical	3	21	junction_1	8.73053390247253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATGTAAATGCAGTAGA	-3	True	NA	NA	False	AATAAA	-8	NA	27100517	27092437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_27092513_27093348_27093523_27093684_27093800_27100084
transcript_20754.known	chr10	-	3994	20	FSM	ENSG00000136758.20	ENST00000326799.7	3994	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	321.765584568553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCTGTATATGGTCTT	1625	False	NA	NA	False	ATTAAA	-23	NA	27154359	27110453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27147497_27147669_27148905_27149041_27154177
transcript_20755.known	chr10	-	4191	19	FSM	ENSG00000136758.20	ENST00000376016.8	4191	19	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_13	136.403733068643	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAAAGATGTTGTGTG	-6	True	NA	60	True	GATAAA	-17	NA	27154384	27110110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27148905_27149041_27154177
transcript_2076.nnic	chr1	-	3295	6	NNC	ENSG00000116237.16	novel	4795	5	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.644873042634	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	NA	False	NA	-4	True	AATAAA	-22	NA	6236060	6221192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_6222161_6223756_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
transcript_20764.known	chr10	-	4127	18	FSM	ENSG00000136758.20	ENST00000613434.4	4127	18	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_15	255.267781238464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGAAAGATGTTGTGT	1564	False	NA	59	True	GATAAA	-16	NA	27154420	27110111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27145427_27145591_27148905_27149041_27154177
transcript_20777.known	chr10	-	3903	13	FSM	ENSG00000107897.20	ENST00000396271.8	3903	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_12	31.281872635051	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	10	True	NA	0	True	AATAAA	-18	NA	27240797	27195213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_20779.known	chr10	-	3848	13	FSM	ENSG00000107897.20	ENST00000375905.8	3848	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	39.9884531945021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGCTTTTATTACTT	-28	True	NA	-3	True	AATAAA	-15	NA	27242130	27195216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
transcript_20780.known	chr10	-	1747	13	FSM	ENSG00000107897.20	ENST00000375888.5	1747	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	51.4578441272293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTAGTTTGTGATGAT	4	True	NA	NA	False	AATGAA	-23	NA	27240558	27197352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_20782.known	chr10	+	4132	12	FSM	ENSG00000120539.15	ENST00000375940.9	4132	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	51.6179544649001	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTGTCAACATCATT	-4	True	NA	6	True	AATAAA	-18	NA	27155351	27187953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27180952_27181067_27181479_27181582_27186378
transcript_20784.known	chr10	+	3623	12	FSM	ENSG00000120539.15	ENST00000375946.8	3623	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_8	40.0802913171314	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTGTAATTTACTTG	307	False	NA	13	True	AATAAA	-17	NA	27154823	27186919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27180952_27181067_27181479_27181582_27186378
transcript_20787.known	chr10	-	4173	12	FSM	ENSG00000107897.20	ENST00000375897.7	4173	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	19.3206950236876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTTTTATTACTTGT	2	True	NA	-1	True	AATAAA	-17	NA	27240879	27195214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_20790.known	chr10	-	3698	12	FSM	ENSG00000107897.20	ENST00000677667.1	3698	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	48.5750675767172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-5	True	NA	-16	True	AATAAA	-2	NA	27240812	27195229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_20792.known	chr10	-	3172	13	FSM	ENSG00000107897.20	ENST00000676997.1	3172	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	49.7180941799753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCTTTAAATAAATAAATA	-10	True	NA	NA	False	NA	NA	NA	27240817	27182837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27184316_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_208.known	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14247	junction_1	3254.29027400753	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
transcript_20806.known	chr10	-	1999	4	FSM	ENSG00000107897.20	ENST00000677902.1	1999	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	56.2217830461547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGAGTTTCGTTCTTT	2	True	NA	NA	False	NA	NA	NA	27240805	27230230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27231821_27235091_27235213_27240318_27240475_27240673
transcript_20809.known	chr10	-	3474	3	FSM	ENSG00000136758.20	ENST00000477432.1	3474	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTTGTTCCAATTA	718	False	NA	-6	True	AATAAA	-14	NA	27155266	27145418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27147669_27148905_27149041_27154177
transcript_20811.known	chr10	+	2622	8	FSM	ENSG00000099246.18	ENST00000621805.5	2622	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	329.694168735146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTGTGTAGGAAGTA	NA	False	NA	20	True	AATAAA	-20	NA	27504233	27539829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27531528_27531616_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_20812.known	chr10	+	4875	7	FSM	ENSG00000099246.18	ENST00000356940.11	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_5	77.9886031559883	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGGATTTTCTTTT	4	True	NA	13	True	AATAAA	-22	NA	27504303	27542239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_20816.known	chr10	+	1800	7	FSM	ENSG00000099246.18	ENST00000683755.1	1800	7	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	292.48285799722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGTAGATTTTTTT	12	True	NA	33	True	AATAAA	-39	NA	27504311	27539185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533940_27533995_27537875
transcript_20817.known	chr10	-	3609	7	FSM	ENSG00000150051.14	ENST00000419761.6	3609	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.97202659436654	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCGTATGGATTTTGTTT	-1	True	NA	NA	False	AATAAA	-21	NA	27745819	27672873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27675416_27675520_27675555_27734455_27734792_27735220_27735375_27741344_27741505_27743227_27743498_27745706
transcript_20820.known	chr10	-	3486	20	FSM	ENSG00000169126.16	ENST00000673439.1	3486	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_19	6.84453398189847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGAGAATATACGTATA	0	True	NA	-96	True	AATAAA	-20	NA	27998862	27812258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998802
transcript_20821.known	chr10	-	3603	20	FSM	ENSG00000169126.16	ENST00000305242.10	3603	20	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_19	5.96016322816508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCATAGTTGTT	-19	True	NA	-5	True	AATAAA	-20	NA	27999079	27812167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
transcript_20826.known	chr10	-	5138	17	FSM	ENSG00000150054.19	ENST00000683449.1	5138	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	9.78339633000728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTTTCATCGAGGCTG	0	True	NA	0	True	ATTAAA	-23	NA	28303064	28050992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_28054245_28056479_28056624_28058494_28058604_28059649_28059744_28069771_28069853_28089670_28089842_28119650_28119716_28120193_28120391_28120593_28120669_28124030_28124117_28125009_28125092_28131559_28131692_28147482_28147564_28149981_28150060_28202152_28202272_28238567_28238736_28302860
transcript_20830.nnic	chr10	-	1511	12	NNC	ENSG00000150054.19	novel	843	9	NA	NA	-21	5213	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	21.3560915110443	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTTTTAGTATTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	28303085	28118858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_28119062_28119650_28119716_28120193_28120391_28120593_28120669_28124030_28124117_28125009_28125092_28131559_28131692_28147482_28147564_28149981_28150060_28202152_28202272_28238567_28238736_28302860
transcript_20833.known	chr10	+	3513	14	FSM	ENSG00000095787.24	ENST00000628285.3	3513	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	163.567694036886	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAAAATTACCTTGAC	5	True	NA	NA	False	AATAAA	-16	NA	28532770	28620986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583405_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_20838.known	chr10	+	5486	14	FSM	ENSG00000095787.24	ENST00000679398.1	5486	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	132.854371488742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCGGTGTGTTTCAATA	5	True	NA	NA	False	AATACA	-21	NA	28533505	28623112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533583_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_20841.known	chr10	+	2176	13	FSM	ENSG00000095787.24	ENST00000375646.5	2176	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	185.213840375569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGGGGGGTTAATTTA	18	True	NA	NA	False	TTTAAA	-14	NA	28532783	28619976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610710_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_20844.known	chr10	+	5924	14	FSM	ENSG00000095787.24	ENST00000375664.8	5924	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	128.438321255239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCGGTGTGTTTCAATA	NA	False	NA	NA	False	AATACA	-21	NA	28532492	28623112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_20848.known	chr10	-	2649	3	FSM	ENSG00000254635.6	ENST00000528337.2	2649	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATAAATGTTCACTT	615	False	NA	NA	False	AATACA	-16	NA	28532395	28522684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_28524612_28525947_28526009_28531734
transcript_20849.known	chr10	-	2323	3	FSM	ENSG00000254635.6	ENST00000527986.5	2323	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTCCAACTTTTCA	-17	True	NA	NA	False	AATAAA	-23	NA	28532743	28522651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_28524612_28525947_28526009_28532441
transcript_20858.known	chr10	+	1691	3	FSM	ENSG00000095739.11	ENST00000375533.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	28.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTGCCTGTGTAATT	-3	True	NA	27	True	TTTAAA	-24	NA	28677520	28682932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28677974_28681257_28681546_28681982
transcript_20861.known	chr10	+	1884	2	FSM	ENSG00000095739.11	ENST00000497699.1	1884	2	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTACCTAAATAAACAAAAAT	12	False	NA	-13	True	NA	NA	NA	28677509	28682677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28677974_28681257
transcript_20865.known	chr10	-	6729	36	FSM	ENSG00000197321.16	ENST00000375400.7	6729	36	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_35	15.2958310980343	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCATGTTCCTTTCT	-6	True	NA	-4	True	AATAAA	-42	NA	29735804	29457337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735750
transcript_20869.known	chr10	-	563	6	FSM	ENSG00000197321.16	ENST00000674490.1	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	8.33306666239986	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-4	True	NA	NA	False	AAGAAA	-20	NA	29735911	29555051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735754
transcript_2087.known	chr1	-	2612	6	FSM	ENSG00000116237.16	ENST00000489498.5	2612	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	256.993073836631	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGGCTTAATGAATTT	5	True	NA	-39	True	NA	NA	NA	6235972	6223490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6225263_6231901_6232120_6233473_6233644_6234404_6234512_6234885_6234975_6235716
transcript_20870.nic	chr10	-	752	6	ISM	ENSG00000197321.16	ENST00000674475.1	7275	39	-98	97718	-98	0	5prime_fragment	FALSE	canonical	2	7	junction_5	16.3266653055668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAAAGAATTCTTAGAA	NA	False	NA	NA	False	NA	NA	NA	29737057	29555078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29736684
transcript_20874.known	chr10	-	9324	4	FSM	ENSG00000165757.9	ENST00000375377.2	9324	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	7.07106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTATGTCCGTTGTCTT	-30	True	NA	-6	True	AATAAA	-15	NA	30059586	30012802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30017918_30026102_30029867_30047531_30047872_30059481
transcript_20879.known	chr10	-	5560	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_6	56.808752626686	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTGCTGTCATTTC	0	True	NA	-15	True	AATAAA	-18	NA	30349278	30309800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
transcript_20880.known	chr10	+	2782	8	FSM	ENSG00000107968.10	ENST00000542547.5	2782	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.29047354790892	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTGAAGCCTGTGAT	NA	False	NA	4	True	AATAAA	-18	NA	30434020	30461833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_30434379_30438915_30439275_30447781_30447950_30450257_30450520_30451637_30451745_30458083_30458237_30459254_30459502_30460705
transcript_20884.known	chr10	-	541	2	FSM	ENSG00000228800.1	ENST00000440932.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATTTGTGTTCTCTGCT	3969	False	NA	NA	False	AAAAAG	-16	NA	30554483	30553853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30554237_30554325
transcript_20885.known	chr10	-	3344	9	FSM	ENSG00000183621.15	ENST00000452305.5	3344	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.36044541059789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGCATGTGTCCTTC	0	True	NA	NA	False	AATATA	-29	NA	31031937	30844637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30845574_30848530_30850368_30857679_30857779_30876997_30877066_30908932_30909016_30910359_30910441_30941574_30941652_30984368_30984427_31031832
transcript_20886.known	chr10	-	3164	7	FSM	ENSG00000183621.15	ENST00000436087.6	3164	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.60874597374975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGCATGTGTCCTTC	0	True	NA	NA	False	AATATA	-29	NA	31031937	30844637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30845574_30848530_30850368_30876997_30877066_30908932_30909016_30941574_30941652_30984368_30984427_31031832
transcript_20887.known	chr10	-	2503	1	FSM	ENSG00000237036.6	ENST00000607166.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	15	True	NA	1	True	AATAAA	-19	NA	31319030	31316527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_31316500_31319000
transcript_20888.known	chr10	-	4958	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_11	33.7889692717082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	NA	False	NA	24	True	NA	NA	NA	31928876	31805403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_20890.known	chr10	-	4914	18	FSM	ENSG00000165322.18	ENST00000375250.9	4914	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_11	33.7880632471451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	7	True	NA	-9	True	AATAAA	-18	NA	31928814	31805436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_20895.nic	chr10	-	1532	11	ISM	ENSG00000170759.11	ENST00000302418.5	5866	26	-28	25734	-28	-17542	5prime_fragment	FALSE	canonical	3	458	junction_7	67.7776511838526	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATCCTGCGGAACACTA	NA	False	NA	NA	False	AAAAAG	-27	NA	32056453	32034748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32034839_32035521_32035668_32035889_32035995_32037253_32037379_32037519_32037608_32038162_32038219_32038777_32038827_32039326_32039432_32040383_32040458_32048463_32048552_32055847
transcript_209.known	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3414	junction_3	8043.65104834241	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
transcript_20902.known	chr10	-	5866	26	FSM	ENSG00000170759.11	ENST00000302418.5	5866	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	122.523467139973	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGACTTTCTTAAAAC	-13	True	NA	-19	True	AATAAA	-19	NA	32056425	32009014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32011517_32015508_32015660_32017142_32017360_32018051_32018157_32018315_32018388_32018501_32018563_32019857_32019960_32021021_32021132_32021225_32021288_32022139_32022258_32022847_32023037_32028427_32028572_32031072_32031280_32032705_32032775_32033844_32034039_32034689_32034839_32035521_32035668_32035889_32035995_32037253_32037379_32037519_32037608_32038162_32038219_32038777_32038827_32039326_32039432_32040383_32040458_32048463_32048552_32055847
transcript_20903.known	chr10	-	3909	14	FSM	ENSG00000120616.16	ENST00000375110.6	3909	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.51705263908957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-29	True	NA	-28	True	AATAAA	-29	NA	32378798	32267750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32378490
transcript_20904.known	chr10	-	3997	14	FSM	ENSG00000120616.16	ENST00000319778.11	3997	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.3405341475895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-18	True	NA	-28	True	AATAAA	-29	NA	32347158	32267750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_20906.nic	chr10	-	1032	5	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-359	10683	0	-10683	5prime_fragment	FALSE	canonical	3	10	junction_4	3	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGAGCTATTGCAC	22	True	NA	NA	False	GATAAA	-15	NA	32347178	32292541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_20910.known	chr10	-	871	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	19	True	NA	-1	True	ATTAAA	-16	NA	32347121	32345111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32345624_32346762
transcript_20911.known	chr10	-	907	2	FSM	ENSG00000120616.16	ENST00000480402.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-18	True	NA	-1	True	ATTAAA	-16	NA	32347218	32345111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32345563_32346762
transcript_20912.nnic	chr10	-	674	3	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-376	11798	-10	-11798	5prime_fragment	FALSE	canonical	3	10	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATCTGCCCATTGCAA	5	True	NA	NA	False	AATAAA	-14	NA	32347195	32293656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32293738_32305771_32305932_32346762
transcript_20914.nnic	chr10	-	863	2	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-376	23643	-10	-23643	5prime_fragment	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGATATAGAAATAGTTT	5	True	NA	NA	False	AAGAAA	-13	NA	32347195	32305501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32305932_32346762
transcript_20917.known	chr10	-	3839	17	FSM	ENSG00000150093.20	ENST00000679187.1	3839	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_15	522.277928286272	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-10	True	NA	-17	True	ATTAAA	-3	NA	32958247	32900332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933481_32933584_32935491_32935559_32958144
transcript_20920.known	chr10	-	4090	16	FSM	ENSG00000150093.20	ENST00000678701.1	4090	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	414.091648470883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	992	False	NA	-17	True	ATTAAA	-3	NA	32957466	32900332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957010
transcript_20921.known	chr10	-	3784	16	FSM	ENSG00000150093.20	ENST00000396033.6	3784	16	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	396.577300857671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTTGGTGGGTAGT	0	True	NA	-3	True	ATTAAA	-17	NA	32957894	32900318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957758
transcript_20922.known	chr10	-	3755	16	FSM	ENSG00000150093.20	ENST00000678120.1	3755	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	411.487253751559	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-16	True	NA	-17	True	ATTAAA	-3	NA	32958253	32900332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920398_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_20923.known	chr10	-	4489	15	FSM	ENSG00000150093.20	ENST00000676460.1	4489	15	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_9	118.45762611024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCCACCAGTATTATC	-16	True	NA	NA	False	NA	NA	NA	32958253	32906318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_20929.nic	chr10	-	540	4	ISM	ENSG00000150093.20	ENST00000484088.5	580	5	-200	3971	-93	0	5prime_fragment	FALSE	canonical	3	1498	junction_3	52.0064098613495	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATAAAAATGTAA	40	False	NA	NA	False	NA	NA	NA	32958418	32929931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32930045_32932514_32932601_32935491_32935559_32958144
transcript_20932.known	chr10	-	3741	16	FSM	ENSG00000150093.20	ENST00000678479.1	3741	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	416.703518370342	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-10	True	NA	-17	True	ATTAAA	-3	NA	32958247	32900332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932510_32932601_32935491_32935559_32958144
transcript_20933.known	chr10	-	2213	12	FSM	ENSG00000099250.18	ENST00000374822.8	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	17.3519713315493	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTACCTCTCTTCTC	1589	False	NA	-4	True	AATAAA	-18	NA	33334642	33197620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_33197710_33202890_33202996_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
transcript_20934.known	chr10	-	1988	11	FSM	ENSG00000099250.18	ENST00000374821.9	1988	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	35.5099985919459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTACCTCTCTTCTC	1709	False	NA	-4	True	AATAAA	-18	NA	33334522	33197620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_33197710_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
transcript_2094.known	chr1	+	1138	5	FSM	ENSG00000225077.3	ENST00000441724.1	1138	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.41740410091868	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGACTGTTGCCACTCG	NA	False	NA	NA	False	NA	NA	NA	6236239	6238940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6236337_6236965_6237151_6237244_6237346_6237813_6237849_6238220
transcript_20944.known	chr10	-	4312	22	FSM	ENSG00000108094.17	ENST00000374748.5	4312	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	115.856839488378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	247	False	NA	-14	True	GATAAA	-16	NA	35090364	35008550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35089895_35090002_35090178
transcript_20945.nic	chr10	-	3183	21	FSM	ENSG00000108094.17	ENST00000691974.1	3187	21	-6	10	-5	4	multi-exon	FALSE	canonical	3	57	junction_20	85.9048892671424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGCCTTTTTTATGTG	242	False	NA	-25	True	AATAAA	-16	NA	35090369	35009861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35089895
transcript_20946.known	chr10	-	4183	21	FSM	ENSG00000108094.17	ENST00000374749.8	4183	21	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_20	65.8019756542309	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-6	True	NA	-14	True	GATAAA	-16	NA	35090341	35008550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090178
transcript_20947.known	chr10	-	4233	21	FSM	ENSG00000108094.17	ENST00000374751.7	4233	21	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_20	55.8344875502588	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	NA	False	NA	-14	True	GATAAA	-16	NA	35090642	35008550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_20959.known	chr10	+	895	7	FSM	ENSG00000095794.20	ENST00000495960.5	895	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	67.7905270340595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAAAATGTCTGGAGA	-24	True	NA	NA	False	AAGAAA	-3	NA	35127062	35211691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35148367_35148492_35178871_35178987_35179133_35179277_35188199_35188389_35206894_35207052_35211655
transcript_20979.known	chr10	+	747	5	FSM	ENSG00000095794.20	ENST00000461968.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	62.5994209238392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAACCTTGAAAGACAT	95	False	NA	NA	False	NA	NA	NA	35126947	35211758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211655
transcript_20980.known	chr10	+	1207	4	FSM	ENSG00000095794.20	ENST00000374726.7	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	48.3206880009887	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGGA	70	False	NA	10	True	AATAAA	-19	NA	35126922	35179847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133
transcript_20982.known	chr10	+	1074	4	FSM	ENSG00000095794.20	ENST00000490460.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	40.3016404408335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATGAACTGAAGGCAGC	-25	True	NA	-52	True	AAAACA	-18	NA	35126958	35211811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35148367_35148492_35206894_35207052_35211253
transcript_20985.known	chr10	+	415	3	FSM	ENSG00000095794.20	ENST00000482633.5	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	62.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTAGCTTTAAGTCTTC	12	False	NA	NA	False	AATACA	-29	NA	35127047	35179304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35178888_35178987_35179133
transcript_20986.known	chr10	+	1416	3	FSM	ENSG00000095794.20	ENST00000460270.5	1416	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	39	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	30	True	NA	-17	True	TTTAAA	-30	NA	35127116	35212435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35206894_35207052_35211253
transcript_20989.known	chr10	+	1030	3	FSM	ENSG00000095794.20	ENST00000474362.5	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAGGAAAGGATGAT	NA	False	NA	18	True	AATAAA	-21	NA	35126790	35212125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35206894_35207052_35211655
transcript_20992.known	chr10	+	5068	10	FSM	ENSG00000108100.18	ENST00000374704.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	58.4465567848098	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGCCTGCCTTCCTGCT	-9	True	NA	NA	False	AATAAA	-29	NA	35336508	35572667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35337208_35483403_35483479_35501500_35501536_35516522_35516624_35525963_35526000_35529972_35530031_35530123_35530244_35553018_35553186_35566022_35566186_35569053
transcript_20997.known	chr10	-	1286	7	FSM	ENSG00000198105.16	ENST00000374648.7	1286	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	36.6943077632243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCCTAATTATTTTGC	8	True	NA	-9	True	AATAAA	-14	NA	37857558	37830855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_20999.known	chr10	-	5143	6	FSM	ENSG00000198105.16	ENST00000395867.8	5143	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	34.8654556832404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGATTAATTCACCCT	5	True	NA	-10	True	AATAAA	-19	NA	37857610	37828762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_21.known	ERCC-00059	+	509	1	FSM	ERCC-00059A	DQ668356	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00059_+_0_500
transcript_210.known	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6001_+_0_6000
transcript_21001.known	chr10	+	6116	5	FSM	ENSG00000189180.16	ENST00000432900.7	6116	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	48.0338422364899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTGTTAGTTGTATG	-14	True	NA	47	True	NA	NA	NA	38010674	38060087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38054374
transcript_21005.known	chr10	+	706	4	FSM	ENSG00000189180.16	ENST00000476504.5	706	4	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	23.2999761564017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTGTTTATTCTGT	4	True	NA	NA	False	NA	NA	NA	38010692	38017707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290
transcript_21006.known	chr10	+	2854	4	FSM	ENSG00000189180.16	ENST00000628825.2	2854	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	104.960309958892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGGGCACCTAACAAT	-34	True	NA	30	True	AATAAA	-39	NA	38010654	38056861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_38010784_38016870_38017016_38017290_38017387_38054377
transcript_21008.known	chr10	+	8738	7	FSM	ENSG00000075407.19	ENST00000361085.9	8738	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	19.6871362400257	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAATCTCAATGGGTCA	-15	True	NA	NA	False	AATGAA	-20	NA	38094346	38125544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_38094491_38095537_38095634_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38117389
transcript_21016.known	chr10	+	1401	8	FSM	ENSG00000099251.14	ENST00000494540.5	1401	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	32.891286607457	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTCCTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	38356379	38378505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_38356490_38358311_38358516_38362239_38362339_38363495_38363611_38365433_38365630_38369952_38370010_38371074_38371174_38377984
transcript_21028.known	chr10	-	5982	5	FSM	ENSG00000196693.15	ENST00000359467.8	5982	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	31.6267292017369	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGAACATCTTGTTT	-5	True	NA	-11	True	AATAAA	-20	NA	42638570	42589108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_21035.known	chr10	+	7759	23	FSM	ENSG00000165733.8	ENST00000374518.6	7759	23	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	57.6365249495878	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGAGTCAGTGGCATT	3	True	NA	11	True	AATAAA	-22	NA	42782794	42834937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_21037.nnic	chr10	+	4386	23	NNC	ENSG00000165733.8	novel	7759	23	NA	NA	6	-3535	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_1	93.9056146500832	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTAGTAGTTTTC	9	True	NA	14	True	ATTAAA	-15	NA	42782800	42831402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_42782999_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_21047.nic	chr10	+	2677	10	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-670	37755	-670	-37755	5prime_fragment	FALSE	canonical	3	424	junction_1	46.219551204877	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	NA	False	NA	23	True	NA	NA	NA	42782124	42797182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_21049.nnic	chr10	+	2169	10	NNC	ENSG00000165733.8	novel	7759	23	NA	NA	6	-37755	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_1	113.87853611482	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	9	True	NA	23	True	NA	NA	NA	42782800	42797182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_42782999_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_21053.known	chr10	+	5617	20	FSM	ENSG00000165731.21	ENST00000355710.8	5617	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_19	8.46567126858236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAACTTTTTTTCTTT	1	True	NA	NA	False	AATAAA	-17	NA	43077068	43130351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43077332_43100458_43100723_43102341_43102630_43104951_43105194_43106375_43106572_43109030_43109231_43111206_43111466_43112098_43112225_43112852_43112964_43113555_43113676_43114479_43114737_43116583_43116732_43118372_43118481_43119530_43119746_43120080_43120204_43121945_43122017_43123670_43123809_43124882_43124983_43126574_43126723_43128111
transcript_21054.known	chr10	+	4159	19	FSM	ENSG00000165731.21	ENST00000340058.6	4159	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	7.26674311886388	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTTCCTAACTTCAT	1	True	NA	1	True	ATTAAA	-13	NA	43077068	43127504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43077332_43100458_43100723_43102341_43102630_43104951_43105194_43106375_43106572_43109030_43109231_43111206_43111466_43112098_43112225_43112852_43112964_43113555_43113676_43114479_43114737_43116583_43116732_43118372_43118481_43119530_43119746_43120080_43120204_43121945_43122017_43123670_43123809_43124882_43124983_43126574
transcript_2107.known	chr1	-	4795	5	FSM	ENSG00000116237.16	ENST00000343813.10	4795	5	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	53.4672797138586	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	13	True	NA	-4	True	AATAAA	-22	NA	6235964	6221192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
transcript_21077.nic	chr10	+	1866	3	ISM	ENSG00000165731.21	ENST00000671844.1	3457	16	-21	23781	-21	815	5prime_fragment	FALSE	canonical	3	22	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTATGCTTCCCCAGAT	NA	False	NA	23	True	ATTAAA	-25	NA	43077042	43103654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_43077332_43100458_43100723_43102341
transcript_21080.known	chr10	+	3765	8	FSM	ENSG00000169826.8	ENST00000374466.4	3765	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	9.76457570893432	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGTGATAAATTTAT	-1	True	NA	NA	False	AATAAA	-24	NA	43138444	43185302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43138568_43154896_43155811_43158714_43158932_43160493_43160596_43163865_43164045_43167003_43167099_43175950_43176033_43183249
transcript_21083.nnic	chr10	+	3670	7	NIC	ENSG00000169826.8	novel	3765	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	22.9903361340272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGTGATAAATTTAT	-1	True	NA	NA	False	AATAAA	-24	NA	43138444	43185302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_43138568_43154896_43155811_43158714_43158932_43160493_43160596_43163865_43164045_43175950_43176033_43183249
transcript_21085.known	chr10	-	3264	13	FSM	ENSG00000198915.12	ENST00000374459.5	3264	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	19.545353241457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	120	False	NA	-7	True	AATAAA	-18	NA	43229739	43194534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43205918_43206123_43229636
transcript_21086.nic	chr10	-	3233	12	NIC	ENSG00000198915.12	novel	3264	13	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.1137856037199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	NA	False	NA	-7	True	AATAAA	-18	NA	43203887	43194534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_21091.nic	chr10	-	1675	12	NIC	ENSG00000198915.12	novel	4104	13	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.1137856037199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	NA	False	NA	-16	True	NA	NA	NA	43203887	43196092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_21094.nic	chr10	-	3356	11	ISM	ENSG00000198915.12	ENST00000395809.5	4104	13	5365	-1558	0	0	3prime_fragment	FALSE	canonical	3	47	junction_5	5.36283507111677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	21	True	NA	-7	True	AATAAA	-18	NA	43203819	43194534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297
transcript_21097.nic	chr10	-	1861	11	ISM	ENSG00000198915.12	ENST00000395809.5	4104	13	5302	0	-63	0	3prime_fragment	FALSE	canonical	3	47	junction_5	5.36283507111677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	NA	False	NA	-16	True	NA	NA	NA	43203882	43196092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297
transcript_211.known	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6002_+_0_6000
transcript_21100.known	chr10	-	2617	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	951.691476617641	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	1357	False	NA	-1	True	TATAAA	-19	NA	43407819	43385616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
transcript_21101.known	chr10	-	2186	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	1013.87803342743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGCACAGATTACTCA	10	True	NA	-44	True	AATAAA	-14	NA	43409166	43386021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
transcript_21102.known	chr10	-	2569	4	FSM	ENSG00000169813.17	ENST00000682386.1	2569	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	712.90158273542	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTCACGCTCCTG	-10	True	NA	-2	True	TATAAA	-18	NA	43409186	43385617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409130
transcript_21104.known	chr10	-	2670	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	1043.55961337466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	294	False	NA	-1	True	TATAAA	-19	NA	43408882	43385616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
transcript_21107.known	chr10	-	715	3	FSM	ENSG00000169813.17	ENST00000498176.1	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_2	42.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGAGGTGTTCAAGT	450	False	NA	NA	False	AAAAAG	-23	NA	43396817	43387642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455
transcript_21109.known	chr10	+	760	2	FSM	ENSG00000230555.2	ENST00000442526.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGGT	118	False	NA	NA	False	NA	NA	NA	43420737	43422100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43421067_43421669
transcript_21110.known	chr10	+	2111	4	FSM	ENSG00000243660.12	ENST00000437590.4	2128	4	15	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	5.09901951359278	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGTGATATTTCATTGA	11	False	NA	5	True	AATAAA	-19	NA	43437125	43483179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43437263_43475720_43475848_43476106_43476203_43481428
transcript_21111.known	chr10	-	2069	4	FSM	ENSG00000196793.14	ENST00000374446.7	2069	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-22	True	NA	-1	True	NA	NA	NA	43574616	43556343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43558172_43567898_43568022_43573636_43573678_43574539
transcript_21113.known	chr10	-	701	2	FSM	ENSG00000196793.14	ENST00000491188.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAATACTTAACACCA	-3	True	NA	NA	False	NA	NA	NA	43574597	43557528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43558172_43574539
transcript_21114.known	chr10	-	2027	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTGCCTTGTGTTT	-24	True	NA	-4	True	NA	NA	NA	43574618	43556346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43558172_43567898_43568022_43574539
transcript_21115.known	chr10	+	2024	5	FSM	ENSG00000198298.13	ENST00000361807.8	2024	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5724115023974	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	12	True	NA	2	True	AATAAA	-18	NA	43606437	43617904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43606547_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_21117.known	chr10	-	1201	3	FSM	ENSG00000169740.14	ENST00000395797.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	47.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTTTATAATTTCT	163	False	NA	-4	True	AATAAA	-23	NA	43648704	43643859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43644802_43646063_43646203_43648584
transcript_21118.known	chr10	-	1159	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	35	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	-14	True	NA	-6	True	AATAAA	-21	NA	43648881	43643861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43644802_43646063_43646203_43648801
transcript_21122.known	chr10	-	3532	4	FSM	ENSG00000107562.17	ENST00000374429.6	3532	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	57.0399470157148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCAACAGTTTGAAATT	4	True	NA	-9	True	AATAAA	-19	NA	44385092	44370164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44373344_44378636_44378724_44380762_44380881_44384944
transcript_21123.known	chr10	-	470	4	FSM	ENSG00000107562.17	ENST00000374426.6	470	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	65.0538238691624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGACCCCCATGCAGA	53	False	NA	NA	False	NA	NA	NA	44385043	44375866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44376033_44378636_44378724_44380762_44380881_44384944
transcript_21126.known	chr10	-	1052	4	FSM	ENSG00000107562.17	ENST00000395794.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	62.2253967444162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCAATAAAATGCTAATT	47	False	NA	-101	True	ACTAAA	-28	NA	44385049	44377163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44377906_44378636_44378724_44380762_44380881_44384944
transcript_21128.known	chr10	-	1857	3	FSM	ENSG00000107562.17	ENST00000343575.11	1928	3	5	66	0	31	multi-exon	FALSE	canonical	3	142	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTCCTACTGTATGTG	4	True	NA	-70	True	AATAAA	-21	NA	44385092	44377132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44378724_44380762_44380881_44384944
transcript_21135.nic	chr10	+	2601	11	NIC	ENSG00000107551.21	novel	3631	11	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	28.290634492708	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	9232	False	NA	9	True	AATAAA	-15	NA	44959728	44994707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44983940_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_21136.nnic	chr10	+	2551	11	NNC	ENSG00000107551.21	novel	3631	11	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	28.5588865329165	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	9232	False	NA	9	True	AATAAA	-15	NA	44959728	44994707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44983990_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_21138.known	chr10	+	3631	11	FSM	ENSG00000107551.21	ENST00000340258.10	3631	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	14.5082735016955	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTATGGGAGAGTGTT	14	True	NA	NA	False	AATAAA	-22	NA	44959801	44995891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_21146.nic	chr10	+	1039	10	ISM	ENSG00000107551.21	ENST00000340258.10	3631	11	-73	3931	-73	0	5prime_fragment	FALSE	canonical	3	70	junction_4	13.4145673535881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAGGAAGAAAGAG	9232	False	NA	NA	False	NA	NA	NA	44959728	44991960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904
transcript_21154.known	chr10	+	4350	10	FSM	ENSG00000107551.21	ENST00000489171.5	4350	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	13.9079868696168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	8910	False	NA	9	True	AATAAA	-15	NA	44959406	44994707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_44959867_44970164_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_21158.nic	chr10	+	1257	9	ISM	ENSG00000107551.21	ENST00000340258.10	3631	11	-73	4548	-73	0	5prime_fragment	FALSE	canonical	3	70	junction_4	12.4799839743487	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGTATTTTGTTGTC	9232	False	NA	4	True	AGTAAA	-14	NA	44959728	44991343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947
transcript_2116.known	chr1	-	2061	4	FSM	ENSG00000116251.11	ENST00000234875.9	2061	4	0	0	0	0	multi-exon	FALSE	canonical	3	3836	junction_3	966.168492321891	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTTTGTTTTTTTTAA	10	True	NA	-2	True	ATTAAA	-30	NA	6199595	6185019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199561
transcript_21168.known	chr10	-	2120	2	FSM	ENSG00000165507.9	ENST00000298295.4	2120	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTGTGTCTCTGTGGT	0	True	NA	NA	False	NA	NA	NA	44978809	44976127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44978056_44978617
transcript_21169.known	chr10	+	2103	2	FSM	ENSG00000165512.5	ENST00000298299.4	2103	2	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTCTGTTTATTTTTC	-7	True	NA	20	True	AATAAA	-23	NA	45000922	45005326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45000979_45003279
transcript_2117.known	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	2702.80673046043	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-1	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
transcript_21172.known	chr10	+	2519	14	FSM	ENSG00000012779.12	ENST00000374391.7	2519	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	3.54347470962493	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTGTTCCATGTGTT	-3	True	NA	NA	False	AATAAA	-16	NA	45374215	45446117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45374430_45382482_45382682_45395854_45395937_45412190_45412314_45424040_45424148_45424959_45425133_45428617_45428765_45440429_45440634_45441343_45441431_45443037_45443217_45443415_45443538_45443727_45443829_45444115_45444287_45445507
transcript_21175.known	chr10	+	2390	13	FSM	ENSG00000012779.12	ENST00000542434.5	2390	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	2.89995210688422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGTTCCATGTGTTAT	-8	True	NA	NA	False	AATAAA	-18	NA	45374175	45446119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45374430_45382482_45382682_45395854_45395937_45412190_45412314_45424040_45424148_45424959_45425133_45428617_45428765_45440429_45440634_45441343_45441431_45443037_45443217_45443415_45443538_45443727_45443829_45445507
transcript_2118.nnic	chr1	-	1217	4	NNC	ENSG00000116251.11	novel	786	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_3	2733.44792442723	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	9829	False	NA	NA	False	AATAAA	-16	NA	6199564	6186614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_6186817_6192929_6193055_6197651_6197757_6198779
transcript_21180.nic	chr10	-	5370	8	NIC	ENSG00000165406.16	novel	5272	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	23.1199180847359	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATGAGAGTGTTT	-1	True	NA	0	True	AATAAA	-19	NA	45594903	45454584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_45458544_45459119_45459268_45461230_45461412_45464238_45464328_45489366_45489418_45533109_45533290_45553111_45553205_45594234
transcript_21183.known	chr10	-	5272	7	FSM	ENSG00000165406.16	ENST00000319836.7	5272	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	13.8443731048635	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGTTTTGCCATGA	-4	True	NA	-8	True	AATAAA	-11	NA	45594906	45454592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_45458544_45459119_45459268_45461230_45461412_45464238_45464328_45489366_45489418_45533109_45533290_45594234
transcript_2119.known	chr1	-	508	4	FSM	ENSG00000116251.11	ENST00000465387.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2774.45998749707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	9840	False	NA	NA	False	NA	NA	NA	6199553	6186722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199369
transcript_212.known	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6003_+_0_6000
transcript_21220.known	chr10	+	4642	31	FSM	ENSG00000172661.20	ENST00000623400.4	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_17	59.8607272480603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	4	True	NA	4	True	AATAAA	-23	NA	45727265	45792964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_21225.known	chr10	+	4623	30	FSM	ENSG00000172661.20	ENST00000374362.6	4623	30	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_26	72.3713504518928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	NA	False	NA	1	True	AATAAA	-20	NA	45727218	45792961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_21229.nnic	chr10	+	4255	30	NIC	ENSG00000172661.20	novel	4642	31	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_16	63.4973386018067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTTTTGTTTTTA	NA	False	NA	17	True	AATAAA	-13	NA	45727202	45792601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_21230.nnic	chr10	+	4615	30	NIC	ENSG00000172661.20	novel	4642	31	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_16	63.4973386018067	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	NA	False	NA	1	True	AATAAA	-20	NA	45727202	45792961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_21236.nnic	chr10	+	3867	29	NIC	ENSG00000172661.20	novel	4642	31	NA	NA	3	-2115	combination_of_known_splicesites	FALSE	canonical	3	83	junction_16	62.9847223944191	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAGAAAGTGGAAG	NA	False	NA	NA	False	AAGAAA	-2	NA	45727202	45790486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355
transcript_21253.known	chr10	+	4669	31	NNC	ENSG00000172661.20	novel	4642	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	74.5700937969699	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	-26	True	NA	1	True	AATAAA	-20	NA	45727235	45792961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755114_45757009_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_21264.known	chr10	-	2770	8	FSM	ENSG00000188234.15	ENST00000616763.6	2535	8	-263	28	-263	-9	multi-exon	FALSE	canonical	3	62	junction_7	10.5830052442584	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCATAAATATGCATTGA	NA	False	NA	-36	True	GATAAA	-26	NA	45847763	45825621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_45827391_45828028_45828081_45831393_45831430_45834015_45834117_45841652_45841688_45844325_45844395_45846686_45846756_45847124
transcript_21269.known	chr10	+	1190	7	FSM	ENSG00000265354.4	ENST00000580018.4	1190	7	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_3	133.529855171876	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGTTGTCTCAATTT	-13	True	NA	50	True	AATAAA	-41	NA	45972488	46003742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45972731_45975453_45975513_45982522_45982617_45982845_45982931_45985382_45985442_45988736_45988848_46003202
transcript_2127.known	chr1	-	1227	4	FSM	ENSG00000116237.16	ENST00000474756.1	1227	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	249.384575839539	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCCCCACTGCATGAAC	5	True	NA	4	True	AAAACA	-25	NA	6235972	6224598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6225263_6231901_6232120_6234885_6234975_6235716
transcript_21272.known	chr10	-	3489	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_9	161.469715847283	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	8	True	NA	-1	True	ATTAAA	-16	NA	46023455	46005087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
transcript_21273.known	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	42.8407905311437	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-14	True	NA	-1	True	ATTAAA	-16	NA	46030623	46005087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_21278.nic	chr10	-	3292	9	NIC	ENSG00000266412.6	novel	3461	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_8	191.823120022066	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	0	True	NA	-1	True	ATTAAA	-16	NA	46030609	46005087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46030525
transcript_213.known	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1781.10201841444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
transcript_2130.known	chr1	+	551	3	FSM	ENSG00000158286.13	ENST00000484435.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATGCTTGCACATGCA	18	True	NA	NA	False	NA	NA	NA	6206128	6207564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6206303_6206535_6206727_6207378
transcript_21300.nnic	chr10	-	2486	4	NNC	ENSG00000204175.6	novel	9279	3	NA	NA	-360	-7308	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	18.8738502225228	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	NA	False	NA	-31	True	NA	NA	NA	46557018	46549043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46555374_46555530_46556497
transcript_21301.nnic	chr10	-	2051	4	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	-360	-7308	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	18.8738502225228	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	NA	False	NA	-31	True	NA	NA	NA	46557018	46549043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46555374_46555530_46556932
transcript_21302.nnic	chr10	-	2055	4	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	-488	-7308	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	16.7531091641721	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	NA	False	NA	-31	True	NA	NA	NA	46557146	46549043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46555374_46555530_46557056
transcript_21304.nnic	chr10	-	2132	3	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	283	-7308	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	22	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	261	False	NA	-31	True	NA	NA	NA	46556375	46549043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46556053
transcript_21305.nnic	chr10	-	2303	3	FSM	ENSG00000204175.6	ENST00000374314.6	9279	3	-332	7308	-332	-7308	multi-exon	FALSE	canonical	2	3	junction_2	23.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	NA	False	NA	-31	True	NA	NA	NA	46556990	46549043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46550743_46554584_46554696_46556497
transcript_21308.known	chr10	-	1966	3	FSM	ENSG00000204175.6	ENST00000374317.2	9274	3	0	7308	0	-7308	multi-exon	FALSE	canonical	3	31	junction_2	9.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	1106	False	NA	-31	True	NA	NA	NA	46555530	46549043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46550743_46554584_46554696_46555374
transcript_21314.nic	chr10	+	1234	4	ISM	ENSG00000204177.11	ENST00000690404.1	2391	6	8	5724	8	-5724	5prime_fragment	TRUE	canonical	0	0	junction_1	62.9620697104393	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGCACAGTGGCTCAT	94	False	NA	NA	False	NA	NA	NA	46786847	46791748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961
transcript_21315.known	chr10	+	2677	3	FSM	ENSG00000266524.3	ENST00000580279.2	2677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGTCACCCATTTCAA	-20	True	NA	NA	False	AATAAA	-28	NA	47300196	47313577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_47300971_47309795_47310722_47312600
transcript_21317.known	chr10	-	3516	2	FSM	ENSG00000265763.4	ENST00000585316.3	3516	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGAGAAGCTGGG	8	True	NA	-12	True	AATAAA	-15	NA	47384293	47365495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_47368938_47384219
transcript_21323.nic	chr10	-	1366	4	ISM	ENSG00000254929.6	ENST00000431840.2	1241	9	-147	25243	-147	-25243	5prime_fragment	FALSE	canonical	3	92	junction_3	31.0161248385416	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGACACAGTGGCTCAT	NA	False	NA	NA	False	AAAAAG	-16	NA	47553661	47548600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553478
transcript_2134.known	chr1	-	2279	3	FSM	ENSG00000116251.11	ENST00000480661.1	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	5877	junction_1	8.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTGGAAATCATAGTC	9830	False	NA	NA	False	NA	NA	NA	6199563	6186574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651
transcript_21344.known	chr10	+	5844	12	FSM	ENSG00000107643.17	ENST00000395611.7	5844	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6749133051267	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	0	True	NA	19	True	AATAAA	-28	NA	48306638	48439357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
transcript_21349.known	chr10	-	2352	10	FSM	ENSG00000128805.15	ENST00000417912.6	2352	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.4079941281454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTAGAAGCGTCTG	8765	False	NA	NA	False	NA	NA	NA	48604952	48446339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48479587_48479765_48555462_48555551_48582952_48583153_48604762
transcript_21350.known	chr10	-	2729	10	FSM	ENSG00000128805.15	ENST00000249601.9	2729	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	38.1342657228669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	26	True	NA	-12	True	ATTAAA	-16	NA	48605073	48446035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48479635_48479765_48555462_48555551_48582952_48583153_48604762
transcript_21354.nic	chr10	-	2140	7	NIC	ENSG00000128805.15	novel	2380	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	30.679345205239	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	5641	False	NA	-12	True	ATTAAA	-16	NA	48466714	48446035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48466575
transcript_21355.nnic	chr10	-	2616	7	NNC	ENSG00000128805.15	novel	2380	9	NA	NA	-3519	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	28.852594722524	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	2140	False	NA	-12	True	ATTAAA	-16	NA	48470215	48446035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48469600
transcript_21356.nnic	chr10	-	2209	7	NIC	ENSG00000128805.15	novel	2380	9	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_6	21.6082545955629	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	3406	False	NA	-12	True	ATTAAA	-16	NA	48524260	48446035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48524052
transcript_2136.nnic	chr1	+	2646	5	NNC	ENSG00000173673.8	novel	710	4	NA	NA	-2269	986	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	95.2129192914491	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAGGACACCAGAGGTC	3153	False	NA	19	True	AATAAA	-27	NA	6241909	6246564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6242784_6244102_6244242_6244350_6244447_6244547_6244630_6245109
transcript_21364.known	chr10	-	1951	2	FSM	ENSG00000128805.15	ENST00000477708.6	1951	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	8322	False	NA	-12	True	ATTAAA	-16	NA	48451627	48446035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_48446620_48450260
transcript_21365.known	chr10	-	6414	8	FSM	ENSG00000165633.13	ENST00000332853.9	6414	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.4166459266004	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACGAGGAGAAAGCTCATT	-5	True	NA	NA	False	ATTAAA	-26	NA	49115522	49014235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49019776_49046982_49047045_49048477_49048585_49064702_49064737_49077218_49077327_49085954_49086024_49107593_49107996_49115430
transcript_21367.known	chr10	-	3495	6	FSM	ENSG00000225830.16	ENST00000447839.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	8.25590697622012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCCTTGAATTTTT	-1	True	NA	NA	False	AATAAA	-19	NA	49539121	49515197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49517122_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_21368.known	chr10	-	3795	5	FSM	ENSG00000225830.16	ENST00000680107.1	3795	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.7224318643355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGAATTTGGTTTGT	474	False	NA	NA	False	TTTAAA	-41	NA	49539082	49514113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49517122_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_21371.known	chr10	-	3706	23	FSM	ENSG00000197444.10	ENST00000374103.9	3706	23	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_22	7.46354777934364	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTTTTCATTTCATG	-18	True	NA	1	True	AATAAA	-18	NA	49762323	49734640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49756775_49756947_49758388_49758594_49762238
transcript_2139.nnic	chr1	+	2162	4	NNC	ENSG00000173673.8	novel	710	4	NA	NA	-1924	986	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	95.4020731197994	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAGGACACCAGAGGTC	3498	False	NA	19	True	AATAAA	-27	NA	6242254	6246564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6242784_6244350_6244447_6244547_6244630_6245109
transcript_21395.known	chr10	-	4294	18	FSM	ENSG00000227345.9	ENST00000616448.2	4294	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	96.3255724974164	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	NA	False	NA	-16	True	AATAAA	-21	NA	49942027	49818278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
transcript_214.known	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_2	1801.78014405199	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
transcript_21404.known	chr10	-	3473	17	FSM	ENSG00000227345.9	ENST00000614063.4	3473	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	109.754769258561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGCAGCCCGCAGA	NA	False	NA	NA	False	NA	NA	NA	49941986	49818991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49941508
transcript_2144.known	chr1	-	1614	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	220.62039655254	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-26	True	NA	-4	True	AATAAA	-17	NA	6385813	6264272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
transcript_2145.known	chr1	-	1804	9	FSM	ENSG00000097021.20	ENST00000545482.5	1804	9	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_5	51.1246943756146	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-5	True	NA	-4	True	AATAAA	-17	NA	6393766	6264272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
transcript_21455.known	chr10	+	2495	7	FSM	ENSG00000204152.14	ENST00000651259.3	2495	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	12.9925192151313	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	-8	True	NA	NA	False	ATTAAA	-19	NA	49942052	49974850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_21461.known	chr10	+	4642	31	FSM	ENSG00000099290.17	ENST00000282633.10	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_16	70.6695282439484	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	1	True	NA	8	True	AATAAA	-23	NA	50067953	50133509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_21464.nic	chr10	+	3939	30	ISM	ENSG00000099290.17	ENST00000282633.10	4642	31	-48	2478	-1	-2318	5prime_fragment	FALSE	canonical	3	57	junction_16	67.6990788669185	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAGAAAGTGGAAG	NA	False	NA	NA	False	AAGAAA	-2	NA	50067905	50131031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900
transcript_21465.known	chr10	+	4623	30	FSM	ENSG00000099290.17	ENST00000351071.11	4623	30	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_26	81.0429342621359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	NA	False	NA	5	True	AATAAA	-20	NA	50067906	50133506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_21470.nnic	chr10	+	4246	30	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	-9	-205	combination_of_known_splicesites	FALSE	canonical	3	53	junction_16	66.4379767621093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGTTTGTTTTGTTTT	NA	False	NA	16	True	AATAAA	-11	NA	50067897	50133144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_21471.nnic	chr10	+	4599	30	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_16	66.4379767621093	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	NA	False	NA	5	True	AATAAA	-20	NA	50067906	50133506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_21477.nnic	chr10	+	3858	29	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	-7	-2318	combination_of_known_splicesites	FALSE	canonical	3	53	junction_16	63.3529552489504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAGAAAGTGGAAG	NA	False	NA	NA	False	AAGAAA	-2	NA	50067899	50131031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900
transcript_21492.nic	chr10	+	2233	21	ISM	ENSG00000099290.17	ENST00000314664.12	4327	29	-9	19353	7	-12512	5prime_fragment	FALSE	canonical	3	57	junction_16	67.6306883005045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCTTCATCTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	50067913	50113996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894
transcript_21493.nic	chr10	+	1619	16	ISM	ENSG00000099290.17	ENST00000314664.12	4327	29	-6	35565	-6	6279	5prime_fragment	FALSE	canonical	3	162	junction_15	46.1430625578994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGAGCAGAAAAAAAGGT	NA	False	NA	NA	False	AATAAA	-1	NA	50067916	50097784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674
transcript_21495.known	chr10	-	3717	11	FSM	ENSG00000198964.14	ENST00000361781.7	3717	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	11.7341382299681	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTATTTCTACTGTG	-23	True	NA	-13	True	AATAAA	-20	NA	50623956	50305599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_50307322_50307981_50308149_50311261_50311416_50327204_50327323_50343491_50344346_50433475_50433557_50460672_50460815_50466889_50466933_50519830_50519922_50590152_50590248_50623706
transcript_215.known	SIRV7	-	2462	5	FSM	SIRV7A	SIRV705	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	2070	junction_2	1376.48435788424	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
transcript_21504.known	chr10	+	12408	4	FSM	ENSG00000226200.7	ENST00000443374.7	12408	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTTGTGACCACTTGT	5	True	NA	NA	False	AATAAA	-18	NA	50624942	50641451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50625192_50626669_50626806_50629030_50629179_50629576
transcript_21506.known	chr10	+	5145	6	FSM	ENSG00000204147.11	ENST00000647317.2	5145	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	42.418863728299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCTCGACTCCCAGTTT	-9	True	NA	NA	False	AATAAA	-23	NA	50739935	50759255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50739984_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_21509.known	chr10	+	632	6	FSM	ENSG00000204147.11	ENST00000374006.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	54.488163852345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAGTGAACTACCA	3	True	NA	NA	False	AATGAA	-1	NA	50739947	50754809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50740003_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_21514.nic	chr10	+	2704	15	ISM	ENSG00000185532.20	ENST00000373980.11	6615	18	730098	3215	-242163	959	3prime_fragment	FALSE	canonical	1	6	junction_2	7.59867066784496	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGACAAAGAAAGAAAG	NA	False	NA	NA	False	AATAAA	-8	NA	51804584	52295135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_51804691_51907506_51907571_52054483_52054562_52062536_52062632_52133839_52133906_52161888_52161964_52251569_52251667_52271349_52271490_52272391_52272482_52280788_52280931_52282152_52282317_52288725_52288849_52288930_52288994_52290223_52290291_52293801
transcript_21519.nic	chr10	+	1539	2	ISM	ENSG00000185532.20	ENST00000643704.1	1549	6	-727	755877	-521	-415206	5prime_fragment	FALSE	canonical	3	31	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTTATTACACTGAAT	11	False	NA	NA	False	AAAAAG	-4	NA	51073782	51153583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_51074902_51153163
transcript_21521.known	chr10	-	4110	1	FSM	ENSG00000177613.9	ENST00000331173.6	4110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTATCTGATATGTTT	-3	True	NA	-4	True	AATAAA	-18	NA	51699595	51695485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_51695500_51699600
transcript_21522.known	chr10	+	1805	4	FSM	ENSG00000107984.10	ENST00000373970.4	1805	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGGTCAATATTTTT	-1	True	NA	NA	False	AATAAA	-14	NA	52314280	52317657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_52314678_52314922_52315086_52316294_52316436_52316553
transcript_21525.known	chr10	-	807	9	FSM	ENSG00000122952.17	ENST00000361148.6	807	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	225.701649030307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAACTCCTGAGTTCAG	-10	True	NA	-87	True	NA	NA	NA	56361266	56358142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_21526.known	chr10	-	1857	9	FSM	ENSG00000122952.17	ENST00000373944.8	1857	9	0	0	0	0	multi-exon	TRUE	canonical	3	618	junction_3	95.1051227589765	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-3	True	NA	18	True	AATAAA	-42	NA	56361259	56357226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_2153.known	chr1	+	837	1	FSM	ENSG00000271746.1	ENST00000607670.1	837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTAGTGCAATTTGAACA	26	False	NA	NA	False	ATTAAA	-18	NA	6393554	6394391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6393600_6394400
transcript_21533.nnic	chr10	-	1642	9	NNC	ENSG00000122952.17	novel	1857	9	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	269.697979228618	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACATTTCTTCTGACTT	NA	False	NA	-16	True	AATAAA	-10	NA	56361302	56357447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_56358149_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_2154.known	chr1	-	507	3	FSM	ENSG00000069812.11	ENST00000377836.8	507	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAGATGTCCAGGCCC	14	False	NA	NA	False	NA	NA	NA	6419903	6412999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6413283_6419606_6419703_6419775
transcript_21540.known	chr10	-	1851	8	FSM	ENSG00000122952.17	ENST00000395405.5	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	100.82658379614	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-17	True	NA	-6	True	AATAAA	-20	NA	56361273	56357437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_21541.known	chr10	-	1621	8	FSM	ENSG00000122952.17	ENST00000489649.6	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	236.638793031377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTTTCTCAAATA	-9	True	NA	-47	True	NA	NA	NA	56361265	56357478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360384_56361195
transcript_2155.nic	chr1	-	1612	10	NIC	ENSG00000215788.11	novel	1968	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	35.436954973273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-24	True	NA	NA	False	ATTAAA	-31	NA	6466185	6461150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_6461763_6461993_6462175_6462628_6462664_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_21550.known	chr10	-	1961	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	106.047814163654	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-3	True	NA	-6	True	AATAAA	-20	NA	56361259	56357437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
transcript_21555.nic	chr10	-	1863	7	NIC	ENSG00000122952.17	novel	1621	8	NA	NA	-29	0	intron_retention	FALSE	canonical	3	178	junction_3	254.949940620158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	NA	False	NA	-6	True	AATAAA	-20	NA	56361302	56357437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56360384_56361195
transcript_2156.known	chr1	-	1968	10	FSM	ENSG00000215788.11	ENST00000356876.8	1968	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	34.6862480310156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGGACGGGGCGCAG	-12	True	NA	NA	False	NA	NA	NA	6466173	6460785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_21568.known	chr10	+	1068	2	FSM	ENSG00000287016.1	ENST00000655098.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATAGTTTCTCTGAAGT	0	True	NA	2	True	AATAAA	-16	NA	56361478	56364714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_56361857_56364024
transcript_21569.known	chr10	-	6093	6	FSM	ENSG00000151151.6	ENST00000373935.4	6093	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	8.49470423263812	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCATTAATTGTAAC	19	True	NA	-19	True	ATTAAA	-17	NA	58267894	58191516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_58196699_58199239_58199322_58216144_58216318_58227042_58227140_58237728_58237815_58267421
transcript_21571.known	chr10	+	2375	3	FSM	ENSG00000122873.12	ENST00000333926.6	2375	3	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	16	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGTTAGGTTAAT	-12	True	NA	NA	False	ATTAAA	-34	NA	58269161	58289586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58269305_58277116_58277323_58287560
transcript_21573.known	chr10	+	2623	7	FSM	ENSG00000072401.15	ENST00000373910.9	2623	7	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	20.6350564708594	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAACTTGTTTGCCTTTGC	-1	True	NA	10	True	ATTAAA	-15	NA	58335005	58370748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58335226_58361337_58361402_58361494_58361527_58363608_58363687_58364770_58364877_58367922_58368017_58368719
transcript_21577.known	chr10	+	2621	6	FSM	ENSG00000072401.15	ENST00000615793.1	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	176.985197121115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTGCCTTTGCTTA	-4	True	NA	13	True	ATTAAA	-18	NA	58334978	58370751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58335226_58361337_58361402_58363608_58363687_58364770_58364877_58367922_58368017_58368719
transcript_21579.known	chr10	+	5025	7	FSM	ENSG00000108064.11	ENST00000487519.6	5025	7	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_4	42.6748039115458	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTATATATTGGTT	-11	True	NA	39	True	AATAAA	-23	NA	58385409	58399220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_21580.known	chr10	+	973	6	FSM	ENSG00000108064.11	ENST00000373895.7	973	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	166.959396261486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGGATCAGAGTAATC	13	True	NA	NA	False	GATAAA	-34	NA	58385433	58395288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58394357_58394415_58394927
transcript_21582.nic	chr10	+	561	4	ISM	ENSG00000108064.11	ENST00000395377.2	663	6	-199	5743	-5	-5743	5prime_fragment	FALSE	canonical	3	419	junction_2	32.4037034920393	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGCTATGACAAAAAAA	-16	True	NA	NA	False	AAAAAG	-25	NA	58385404	58388796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669
transcript_21583.nic	chr10	+	432	3	ISM	ENSG00000108064.11	ENST00000395377.2	663	6	-197	6279	-3	-6279	5prime_fragment	FALSE	canonical	3	419	junction_2	37.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCACATAAGTTTTCAA	-14	True	NA	NA	False	AAGAAA	-4	NA	58385406	58388260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_58385649_58386219_58386339_58388189
transcript_21584.known	chr10	-	3946	6	FSM	ENSG00000165449.12	ENST00000395348.8	3946	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	9.89949493661167	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTGGTTGCTTTTTCT	21	True	NA	-4	True	AATAAA	-21	NA	59709850	59650763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_59652951_59653674_59654590_59664226_59664323_59672769_59672914_59684095_59684328_59709478
transcript_21593.known	chr10	-	5727	9	FSM	ENSG00000108091.11	ENST00000263102.7	5727	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	21.0561006599038	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTTTTTTCATTTCG	-8	True	NA	3	True	AATAAA	-36	NA	59906556	59788746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_59793112_59794472_59794598_59804419_59804521_59806921_59807079_59812634_59812796_59814651_59814756_59832524_59832654_59852552_59852703_59906121
transcript_21598.nic	chr10	-	1025	3	ISM	ENSG00000108091.11	ENST00000263102.7	5727	9	-353	43820	-353	-26123	5prime_fragment	FALSE	canonical	3	193	junction_1	26	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGAATGACACCATTTC	140	False	NA	NA	False	ATTAAA	-4	NA	59906909	59832566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_59832654_59852552_59852703_59906121
transcript_21599.known	chr10	-	3811	21	FSM	ENSG00000151150.22	ENST00000355288.6	3811	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_20	19.9889969733351	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCACCCACAT	-4	True	NA	NA	False	AAAAAG	-5	NA	60141016	60029689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
transcript_2160.known	chr1	-	1119	9	FSM	ENSG00000215788.11	ENST00000348333.7	1119	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	40.9464207837511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCGCCCACTTGCCACC	8996	False	NA	NA	False	NA	NA	NA	6466107	6461433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465439_6465561_6466068
transcript_21608.known	chr10	+	1889	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	483.17778871778	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	-1	True	NA	9	True	ATTAAA	-16	NA	60778477	60794852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
transcript_2161.known	chr1	-	1198	9	FSM	ENSG00000215788.11	ENST00000414040.6	1198	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	39.2681088798531	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCGCCCACTTGCCACC	8996	False	NA	NA	False	NA	NA	NA	6466107	6461433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_21614.known	chr10	+	1948	8	FSM	ENSG00000170312.17	ENST00000448257.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	434.511830232785	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTAAACTGTTTAACAA	-4	True	NA	-15	True	AAAAAG	-37	NA	60778492	60794828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791893_60792054_60792147_60792290_60793876
transcript_21619.known	chr10	+	1733	7	FSM	ENSG00000170312.17	ENST00000316629.8	1733	7	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_4	460.558718659557	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	NA	False	NA	0	True	ATTAAA	-7	NA	60778453	60794843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60791889_60792054_60792147_60792290_60793876
transcript_21630.known	chr10	-	4411	11	FSM	ENSG00000072422.17	ENST00000337910.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	6.39452891149927	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCCAGTTTTGTTTTAA	0	True	NA	NA	False	AATAAA	-18	NA	60944185	60869437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_60871652_60872184_60872291_60874953_60875043_60877907_60878059_60886111_60886231_60888211_60889186_60892809_60892996_60910886_60910991_60911350_60911553_60941803_60941855_60943970
transcript_21639.known	chr10	-	6886	12	FSM	ENSG00000182010.11	ENST00000373789.8	6886	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	70.7159373949953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTAGCAATTTTATA	0	True	NA	-2	True	AATAAA	-13	NA	62268844	62193085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_21640.known	chr10	-	2076	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	33.4140688932072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTTATTCCTGGGA	21	True	NA	-11	True	AATAAA	-12	NA	62268707	62238156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_21643.known	chr10	+	3760	1	FSM	ENSG00000181915.5	ENST00000373783.3	3760	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGTCTGTCTAAATGC	-23	True	NA	18	True	AATAAA	-24	NA	62804719	62808479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_62804700_62808500
transcript_21644.known	chr10	-	2979	2	FSM	ENSG00000122877.18	ENST00000242480.4	2979	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTGCAGAAATCATT	-7	True	NA	NA	False	AATAAA	-16	NA	62816366	62811995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_62814469_62815860
transcript_21647.known	chr10	+	1813	4	FSM	ENSG00000148572.16	ENST00000277746.11	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	18.9267594221045	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	4	True	NA	27	True	AATAAA	-15	NA	63133327	63155024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_63133501_63146208_63146294_63152149_63152191_63153510
transcript_2165.nic	chr1	+	2078	8	NIC	ENSG00000187017.18	novel	1494	7	NA	NA	-140	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	13.5209587874016	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTGGCCGCGACTTG	2507	False	NA	27	True	ATTAAA	-30	NA	6447190	6460944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6447460_6448640_6448803_6448892_6449092_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_21650.known	chr10	+	1816	3	FSM	ENSG00000148572.16	ENST00000435510.6	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAACGTGGTTGATAGTT	NA	False	NA	34	True	AATAAA	-22	NA	63133246	63155031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_63133501_63152149_63152191_63153510
transcript_2166.known	chr1	+	1339	8	FSM	ENSG00000187017.18	ENST00000461727.6	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	7.08836356003159	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGACTTACATATATTTG	-24	True	NA	23	True	NA	NA	NA	6448042	6460399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6448118_6448640_6448803_6448892_6449092_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_21663.nic	chr10	-	1496	7	ISM	ENSG00000171988.20	ENST00000542921.5	8149	25	-211	47363	-24	471	5prime_fragment	FALSE	canonical	3	100	junction_5	22.286019533929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTCAAAAATAAATGGAG	NA	False	NA	NA	False	AATAAA	-3	NA	63269277	63214952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_21665.nic	chr10	-	1369	7	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-39	48038	-39	161	5prime_fragment	FALSE	canonical	3	19	junction_6	52.4131556852751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCCACTTTTTTTTT	-5	True	NA	34	True	NA	NA	NA	63466016	63215262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63465494
transcript_21668.nic	chr10	-	1390	6	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	-24	471	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	41.3114996096729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTCAAAAATAAATGGAG	NA	False	NA	NA	False	AATAAA	-3	NA	63269277	63214952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_21670.known	chr10	-	734	6	FSM	ENSG00000171988.20	ENST00000469152.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	24.0116638323961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGCAATGAACTCCC	-4	True	NA	-127	True	NA	NA	NA	63268875	63215423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_21677.nnic	chr10	-	899	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-39	212881	-39	-160229	5prime_fragment	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGATGTGGTGGCACA	-5	True	NA	NA	False	AAAAAG	-37	NA	63466016	63380105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_63380483_63465494
transcript_21679.known	chr10	+	1335	1	FSM	ENSG00000272767.1	ENST00000609436.1	1335	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCACTGCTTTATTATA	NA	False	NA	16	True	TTTAAA	-1	NA	63465228	63466563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_63465200_63466600
transcript_21680.known	chr10	+	5172	8	FSM	ENSG00000165476.14	ENST00000373758.5	5172	8	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_6	31.3681236874868	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAACGGCATTTTTTT	6	True	NA	NA	False	AATAAA	-18	NA	63521400	63625128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186_63610335_63619654_63619801_63620812
transcript_21682.nic	chr10	+	741	6	ISM	ENSG00000165476.14	ENST00000373758.5	5172	8	-58	14821	-58	-10515	5prime_fragment	FALSE	canonical	3	384	junction_5	29.7213727812159	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACCAGCCCCCAGTGAA	296	False	NA	NA	False	AAAAAG	-5	NA	63521342	63610307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186
transcript_21683.nic	chr10	+	703	5	ISM	ENSG00000165476.14	ENST00000373758.5	5172	8	-58	25762	-58	-21456	5prime_fragment	FALSE	canonical	3	395	junction_4	24.1660919471891	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATTTTGCTATATT	296	False	NA	NA	False	AATAAA	-31	NA	63521342	63599366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169
transcript_21687.known	chr10	+	1710	6	FSM	ENSG00000228065.12	ENST00000598902.6	1710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.6207344378814	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTTGGTAGCTGCTCT	-6	True	NA	NA	False	GATAAA	-32	NA	65570519	65632828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65632079
transcript_21688.known	chr10	-	1221	5	FSM	ENSG00000108176.15	ENST00000225171.7	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1.11803398874989	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAATTTATAATTCAA	-4	True	NA	NA	False	AATAAA	-19	NA	67838188	67796668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_67797211_67805582_67805788_67811523_67811664_67823313_67823393_67837933
transcript_21689.known	chr10	+	4107	9	FSM	ENSG00000096717.12	ENST00000212015.11	4107	9	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_4	37.7491721763537	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTTAAGGTATATAAT	-1	True	NA	44	True	ATTAAA	-31	NA	67884655	67918390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_67885152_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
transcript_21693.known	chr10	-	4445	26	FSM	ENSG00000148634.16	ENST00000395198.7	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	31.7042836222489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCAGTGGTTCTCAT	3	True	NA	-9	True	AATAAA	-21	NA	68075283	67921907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67959112_67959137_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_21695.known	chr10	-	4424	25	FSM	ENSG00000148634.16	ENST00000373700.9	4424	25	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_11	16.6724989795238	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGTGGTTCTCATATA	3	True	NA	-6	True	AATAAA	-24	NA	68075283	67921904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_21700.nic	chr10	-	2279	16	ISM	ENSG00000148634.16	ENST00000412272.6	4211	24	-40	44710	-22	-1826	5prime_fragment	FALSE	canonical	3	84	junction_2	17.2991971554238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGGTTTTGAAATGAG	24	False	68075347	-21	True	AATAAA	-12	NA	68075323	67966617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_21701.known	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	59.3520569708133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	3	True	NA	-2	True	AATAAA	-18	NA	68075283	68067688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
transcript_21706.known	chr10	-	4269	18	FSM	ENSG00000204130.14	ENST00000602465.6	4269	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.86054782091621	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTGGTGTATGCCCTA	-4	True	NA	93	True	AATAAA	-22	NA	68407277	68343407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68407185
transcript_21711.known	chr10	+	1332	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_4	343.12305678687	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	26	False	NA	20	True	AATAAA	-16	NA	68332121	68342272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_21713.known	chr10	+	2356	10	FSM	ENSG00000096746.18	ENST00000265866.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	356.824817827017	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	-1	True	NA	21	True	AATAAA	-21	NA	68332063	68343193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_21715.nic	chr10	+	1436	10	NIC	ENSG00000096746.18	novel	1332	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	394.320543920837	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	722	False	NA	19	True	AATAAA	-15	NA	68332035	68342271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_21716.nic	chr10	+	2358	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	394.320543920837	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	722	False	NA	21	True	AATAAA	-21	NA	68332035	68343193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_21717.nic	chr10	+	1481	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	405.801264988993	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	722	False	NA	19	True	AATAAA	-15	NA	68332035	68342271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_21718.nic	chr10	+	2403	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	405.801264988993	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	722	False	NA	21	True	AATAAA	-21	NA	68332035	68343193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_21721.known	chr10	-	2165	10	FSM	ENSG00000108187.16	ENST00000309049.8	2165	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	4.26296135405575	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAATGT	-13	True	NA	NA	False	NA	NA	NA	68332906	68283063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306907_68332783
transcript_21738.known	chr10	+	635	5	FSM	ENSG00000096746.18	ENST00000486854.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	386.1537906068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAATGAGAGATGG	7	False	NA	13	True	NA	NA	NA	68332102	68339201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139
transcript_21739.nic	chr10	-	4284	21	NIC	ENSG00000138346.15	novel	4267	21	NA	NA	-21	-4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	54.9076497402684	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCTTAACTGTGTCAAT	NA	False	NA	-8	True	AATAAA	-14	NA	68471994	68414067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_68415106_68416706_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_21749.nic	chr10	-	1833	11	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	127	17465	-21	4400	internal_fragment	FALSE	canonical	3	208	junction_2	18.5905890170269	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATATAGATACCCCAT	NA	False	NA	NA	False	AAGAAA	-5	NA	68471994	68432453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_21750.nic	chr10	-	2215	10	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	127	21583	-21	282	internal_fragment	FALSE	canonical	3	208	junction_1	19.2975403025462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATCATTAACCATTTTAA	NA	False	NA	NA	False	AATAAA	-26	NA	68471994	68436571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_21752.known	chr10	-	4267	21	FSM	ENSG00000138346.15	ENST00000358410.8	4267	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.3201908183323	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-43	True	NA	-4	True	AATAAA	-18	NA	68471973	68414063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68415108_68416708_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_21755.nic	chr10	+	3981	4	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	0	48305	0	-48305	5prime_fragment	TRUE	canonical	3	62	junction_1	3.39934634239519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCCCATCAAGAGATCG	3	True	NA	30	True	AAAAAG	-7	NA	68560336	68646182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697
transcript_21757.nic	chr10	+	751	2	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	-152	122078	-152	-122078	5prime_fragment	FALSE	canonical	3	62	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCCAACTACGAAAGACAA	NA	False	NA	NA	False	AAAAAG	-6	NA	68560184	68572409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68560743_68572216
transcript_21758.nic	chr10	+	726	2	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	-32	121983	-32	-121983	5prime_fragment	FALSE	canonical	3	62	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGATGTTAAGAAAAAAACA	8	True	NA	NA	False	ATTAAA	-18	NA	68560304	68572504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68560743_68572216
transcript_21759.known	chr10	+	9612	12	FSM	ENSG00000138336.9	ENST00000373644.5	9612	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	38.6298390212788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCATCTAACATTATTT	3	True	NA	12	True	AATAAA	-32	NA	68560336	68694487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68681398_68681489_68682835_68682974_68686355_68686708_68690807
transcript_21761.nic	chr10	+	2581	18	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-63	21046	32	0	5prime_fragment	FALSE	canonical	0	0	junction_14	122.623795226332	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	2	False	NA	51	True	GATAAA	-13	NA	68721175	68771331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_21762.nic	chr10	+	2668	18	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-63	20959	32	0	5prime_fragment	FALSE	canonical	0	0	junction_14	122.623795226332	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAGATAGAGATGA	2	False	NA	-11	True	GATAAA	-4	NA	68721175	68771418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_21764.nic	chr10	+	2661	18	NIC	ENSG00000060339.14	novel	4658	25	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	146.130671011874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	-10	True	NA	51	True	GATAAA	-13	NA	68721219	68771331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68721407_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_2177.nic	chr1	+	1989	7	NIC	ENSG00000187017.18	novel	1339	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	31	junction_6	5.28099317258495	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTGGCCGCGACTTG	-3	True	NA	27	True	ATTAAA	-30	NA	6448027	6460944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6448118_6448640_6449092_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_21771.known	chr10	+	2432	17	FSM	ENSG00000060339.14	ENST00000541012.5	2432	17	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	110.828820005222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATAACAACCTGC	-3	True	NA	15	True	GATAAA	-30	NA	68721226	68771444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_21776.nic	chr10	+	2185	16	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-63	31263	32	3816	5prime_fragment	FALSE	canonical	0	0	junction_14	126.398030926998	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAACAGAAGGAGTTAGA	2	False	NA	-3	True	AAAACA	-23	NA	68721175	68761114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006
transcript_21788.known	chr10	+	4540	24	FSM	ENSG00000060339.14	ENST00000630771.2	4540	24	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	121.755946043614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTACTTCCTTCAG	60	False	NA	7	True	ATTAAA	-17	NA	68721143	68792375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_21797.known	chr10	+	3630	4	FSM	ENSG00000165730.16	ENST00000642869.1	3630	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.94392028877595	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAATTTTTT	89	False	NA	14	True	AATATA	-16	NA	68827623	68893060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68828270_68881957_68882111_68884259_68886619_68892588
transcript_21802.known	chr10	+	2501	15	FSM	ENSG00000107625.14	ENST00000373585.8	2501	15	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	21.3394575605752	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	18	True	NA	25	True	AATAAA	-28	NA	68901314	68946847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_21807.nic	chr10	+	811	4	ISM	ENSG00000107625.14	ENST00000373585.8	2501	15	-116	35615	-87	-1998	5prime_fragment	FALSE	canonical	3	228	junction_2	11.8415464455544	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGCTCACCAAAGGTAATC	NA	False	NA	NA	False	ATTAAA	-5	NA	68901198	68911232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067
transcript_21809.nic	chr10	+	410	2	ISM	ENSG00000107625.14	ENST00000373585.8	2501	15	-58	39942	-29	-6325	5prime_fragment	FALSE	canonical	3	242	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTACCAAATGGAGATAT	NA	False	NA	NA	False	AATAGA	-43	NA	68901256	68906905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68901472_68906710
transcript_2181.known	chr1	+	813	7	FSM	ENSG00000187017.18	ENST00000475228.6	813	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	16.4485730553004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCTGCGGACGCTGG	-5	True	NA	NA	False	NA	NA	NA	6448466	6460052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6448562_6448640_6448803_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_21811.known	chr10	+	4664	15	FSM	ENSG00000165732.14	ENST00000354185.9	4664	15	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_10	60.1601603884097	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGGCTTTTGTTTTC	-3	True	NA	13	True	AATAAA	-16	NA	68956169	68985068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68956313_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_21812.known	chr10	+	4829	15	FSM	ENSG00000165732.14	ENST00000620315.2	4776	15	29	-82	29	-1	multi-exon	FALSE	canonical	3	32	junction_1	182.665524600432	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	-1	True	NA	12	True	AATAAA	-15	NA	68956439	68985067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68956749_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_21815.nic	chr10	+	530	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-202	19332	-199	-19332	5prime_fragment	FALSE	canonical	3	722	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGCCATCTCAAAATGA	NA	False	NA	-12	True	AAAAAG	-13	NA	68955935	68959958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68956313_68959805
transcript_21816.nic	chr10	+	425	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	2	19233	2	-19233	5prime_fragment	FALSE	canonical	3	722	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGACAAAAAATGAGGAGCC	NA	False	NA	22	True	AAAAAG	-43	NA	68956139	68960057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68956313_68959805
transcript_21817.nic	chr10	+	483	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-3	19180	0	-19180	5prime_fragment	FALSE	canonical	3	722	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGATGAAGAAAGAAAAGG	NA	False	NA	75	True	AATAGA	-16	NA	68956134	68960110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68956313_68959805
transcript_21818.known	chr10	+	2583	8	FSM	ENSG00000198954.9	ENST00000635779.2	2583	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	169.702140017534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	6	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69007626_69007752_69008840_69008926_69010899_69011016_69015540
transcript_21819.known	chr10	+	2462	7	FSM	ENSG00000198954.9	ENST00000361983.7	2462	7	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_6	38.2041300850517	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTCCTTTTTGTTT	6	True	NA	NA	False	AATAAA	-29	NA	68988802	69016982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_21822.known	chr10	+	890	4	FSM	ENSG00000198954.9	ENST00000625461.2	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	32.5610537640019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTATCTTTTAAAAA	6	True	NA	NA	False	TATAAA	-22	NA	68988802	69005986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731
transcript_21824.known	chr10	+	2533	8	FSM	ENSG00000198954.9	ENST00000638119.2	2533	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	166.115155533621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	6	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_68995203_68995279_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_21825.known	chr10	+	4227	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_8	70.4765031765907	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTCATTGTT	-27	True	NA	NA	False	ATTAAA	-21	NA	69124177	69174412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_21833.known	chr10	+	2554	8	FSM	ENSG00000122958.15	ENST00000395098.5	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	261.742746425039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGAGCTTGCTGTTT	84	False	NA	16	True	AATAAA	-12	NA	69124151	69172856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69171155
transcript_21835.nic	chr10	+	2624	16	NIC	ENSG00000156502.14	novel	2477	15	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_2	84.6329066550883	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	341	False	NA	64	True	AATAAA	-14	NA	69180221	69209093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_69180563_69182519_69182655_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_21837.known	chr10	+	2477	15	FSM	ENSG00000156502.14	ENST00000359655.9	2477	15	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	26.9057311245567	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	-22	True	NA	64	True	AATAAA	-14	NA	69180233	69209093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_21839.nnic	chr10	+	2512	15	NNC	ENSG00000156502.14	novel	2477	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	71.0255774567249	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	-9	True	NA	64	True	AATAAA	-14	NA	69180246	69209093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_69180563_69185938_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_21842.known	chr10	+	2392	6	FSM	ENSG00000156502.14	ENST00000471069.5	2392	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	12.3028451993838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTTTACTATTTGGTAG	-6	True	NA	NA	False	ATTAAA	-11	NA	69180249	69193263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654
transcript_21856.known	chr10	+	3602	18	FSM	ENSG00000156515.24	ENST00000359426.7	3602	18	0	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_7	113.430465873306	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGAGTGATGCTTAATG	-34	True	NA	29	True	AGTAAA	-18	NA	69318846	69401882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69319011_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_21862.known	chr10	+	3745	18	FSM	ENSG00000156515.24	ENST00000493591.6	3745	18	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	342.597820244067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGTACCAATTCAAAGA	-28	True	NA	11	True	NA	NA	NA	69318852	69401864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69319178_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_219.nic	SIRV7	-	921	5	NIC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	2359	junction_4	2382.23271060994	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_SIRV7_-_56098_70883_70988_78841_78964_114680_114961_147608
transcript_21915.known	chr10	+	1703	8	FSM	ENSG00000099282.10	ENST00000373290.7	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.2120377146637	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	-30	True	NA	20	True	AATAAA	-22	NA	69451464	69507666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69451691_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_21916.nnic	chr10	+	1619	8	NNC	ENSG00000099282.10	novel	1703	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.3494255891136	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	-18	True	NA	20	True	AATAAA	-22	NA	69451476	69507666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_69451619_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_21920.nnic	chr10	+	1436	6	NIC	ENSG00000099282.10	novel	1703	8	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	36.124230095602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	-24	True	NA	20	True	AATAAA	-22	NA	69451470	69507666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_69451691_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_21924.known	chr10	+	1073	4	FSM	ENSG00000171224.9	ENST00000373279.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	27.471197037382	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	-9	True	NA	114	True	AATAAA	-17	NA	69630246	69633596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69630314_69631479_69631548_69631708_69631840_69632789
transcript_21953.known	chr10	+	1833	34	FSM	ENSG00000197467.17	ENST00000520133.5	1833	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.2079008950365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTAACCTTGGATTGG	454	False	NA	NA	False	NA	NA	NA	69802423	69958701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69802718_69822368_69822439_69867797_69867806_69872183_69872211_69887455_69887492_69888303_69888331_69889413_69889441_69894551_69894579_69894674_69894702_69895549_69895577_69897474_69897532_69902747_69902856_69904932_69904960_69905786_69905823_69917288_69917334_69918284_69918318_69919061_69919089_69921881_69921936_69922707_69922795_69923801_69923856_69924962_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69935349_69935392_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69957003_69957043_69958698
transcript_21976.nic	chr10	+	1248	3	ISM	ENSG00000197467.17	ENST00000673830.1	2265	4	-28	5423	2	-5423	5prime_fragment	FALSE	canonical	1	8	junction_2	15	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACCAGGTATTAGAAGAAA	2	True	NA	NA	False	NA	NA	NA	69801881	69868139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_69802718_69822368_69822439_69867797
transcript_2198.known	chr1	-	1706	9	FSM	ENSG00000215788.11	ENST00000480393.5	1706	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	35.0811559102604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-14	True	NA	NA	False	ATTAAA	-31	NA	6466175	6461150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_21980.known	chr10	+	2027	10	FSM	ENSG00000099284.15	ENST00000679349.1	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.325721293644	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTACAACATATT	-9	True	NA	14	True	AATAAA	-9	NA	70052845	70112266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70053001_70055066_70055178_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_21985.known	chr10	+	1932	9	FSM	ENSG00000099284.15	ENST00000373255.9	1932	9	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_2	46.6380678737874	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTATTGCAACATT	-9	True	NA	30	True	AATAAA	-25	NA	70052845	70112282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_2199.known	chr1	-	1632	10	FSM	ENSG00000215788.11	ENST00000377782.7	1632	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.4943101855878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-14	True	NA	NA	False	ATTAAA	-31	NA	6466175	6461150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6463064_6463148_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_21994.known	chr10	-	3134	9	FSM	ENSG00000042286.15	ENST00000307864.3	3134	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	9.3799986673773	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGGATCTTTTATTTT	4	True	NA	NA	False	AATAAA	-19	NA	70132825	70112270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70132733
transcript_22.known	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00060_+_0_500
transcript_220.known	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3450	junction_1	1852.2667700685	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
transcript_22004.nic	chr10	+	1894	8	NIC	ENSG00000099284.15	novel	2027	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_6	184.761512027074	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTACAACATATT	191	False	NA	14	True	AATAAA	-9	NA	70052777	70112266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70109032_70109208_70111517
transcript_22005.known	chr10	+	1981	8	FSM	ENSG00000099284.15	ENST00000676699.1	1981	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.787702059206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTGATTCAGGCTTTT	1	True	NA	5	True	NA	NA	NA	70052587	70112184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_22010.nnic	chr10	-	2434	5	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	7	-1225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	56.2377764496428	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-4	True	NA	-18	True	AATAAA	-18	NA	70146669	70139207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70140142_70142667_70142854_70143841_70143973_70145420_70145509_70145574
transcript_22011.known	chr10	-	3758	4	FSM	ENSG00000156521.14	ENST00000287078.7	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	15.06283137026	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTCTCTGAGCTC	-35	True	NA	-2	True	AATAAA	-14	NA	70146700	70137980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70145420
transcript_22013.known	chr10	-	2620	4	FSM	ENSG00000156521.14	ENST00000479086.1	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	53.2228021309163	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTGTGTCTCTGAGC	-11	True	NA	-4	True	AATAAA	-12	NA	70146676	70137982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70146532
transcript_22017.nnic	chr10	-	2458	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-16	-1225	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	53.8970211504206	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	5041	False	70146739	-18	True	AATAAA	-18	NA	70146716	70139207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70140142_70142667_70142765_70143841_70143973_70145420
transcript_22022.nnic	chr10	-	2450	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-16	-1225	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	51.2315007262784	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	5041	False	70146739	-18	True	AATAAA	-18	NA	70146716	70139207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70140142_70142764_70142854_70143841_70143973_70145420
transcript_22026.nnic	chr10	-	2361	3	NIC	ENSG00000156521.14	novel	3758	4	NA	NA	-16	-1225	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	50	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	5041	False	70146739	-18	True	AATAAA	-18	NA	70146716	70139207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_70140142_70143841_70143973_70145420
transcript_22028.known	chr10	-	3397	2	FSM	ENSG00000156521.14	ENST00000335494.5	3397	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTCTCTGAGCTC	9	True	NA	-2	True	AATAAA	-14	NA	70146656	70137980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70140142_70145420
transcript_22029.known	chr10	-	5981	8	FSM	ENSG00000079332.15	ENST00000373242.6	5981	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	428.151174903712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-28	True	NA	-16	True	ATTAAA	-14	NA	70170523	70147288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689_70162760_70170412
transcript_22031.known	chr10	-	5902	7	FSM	ENSG00000079332.15	ENST00000373241.9	5902	7	0	0	0	0	multi-exon	FALSE	canonical	3	818	junction_4	122.315734428931	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-19	True	NA	-16	True	ATTAAA	-14	NA	70170514	70147288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70170412
transcript_22032.nnic	chr10	-	2934	7	NNC	ENSG00000079332.15	novel	3227	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	20	junction_6	371.308796316788	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCTATTTCCTTTTTTTT	-29	False	NA	NA	False	AATAAA	-14	NA	70170524	70150203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70170475
transcript_22036.known	chr10	-	1292	11	FSM	ENSG00000180817.12	ENST00000373232.8	1292	11	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_8	99.9847988446244	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTAGGATATTTTTA	-1	True	NA	-5	True	AATAAA	-16	NA	70233429	70202834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
transcript_2204.known	chr1	-	3731	22	FSM	ENSG00000171680.23	ENST00000400915.8	3731	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_21	16.8893961017045	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	4	True	NA	-1	True	TATAAA	-18	NA	6497424	6467121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6496492_6496570_6497319
transcript_22042.known	chr10	-	3095	5	FSM	ENSG00000172731.15	ENST00000373224.5	3095	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	33.9512518178638	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTGGTGTTTGATT	34	False	NA	-4	True	AATAAA	-19	NA	70382589	70298972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382493
transcript_22043.known	chr10	-	3074	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	10.0249688278817	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-2	True	NA	-6	True	AATAAA	-17	NA	70382625	70298974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
transcript_22046.known	chr10	-	2959	4	FSM	ENSG00000172731.15	ENST00000395010.5	2959	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	24.9131825880731	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	NA	False	NA	-1	True	AATAAA	-22	NA	70382650	70298969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70382548
transcript_22048.known	chr10	-	2924	4	FSM	ENSG00000172731.15	ENST00000358141.6	2924	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	34.1207007873845	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-3	True	NA	-7	True	AATAAA	-16	NA	70382626	70298975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70376451_70376597_70382548
transcript_22049.known	chr10	-	2906	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	31.2089730686545	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-3	True	NA	-7	True	AATAAA	-16	NA	70382626	70298975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
transcript_22050.nnic	chr10	-	2768	3	NIC	ENSG00000172731.15	novel	3074	5	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-14	True	NA	-6	True	AATAAA	-17	NA	70382637	70298974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_70301509_70376451_70376597_70382548
transcript_22051.nic	chr10	-	2765	3	NIC	ENSG00000172731.15	novel	2906	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-7	True	NA	-7	True	AATAAA	-16	NA	70382630	70298975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_70301509_70340552_70340703_70382548
transcript_22052.nnic	chr10	+	2576	4	NNC	ENSG00000148730.7	novel	7491	3	NA	NA	-4	-4771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	628.486188303998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTTTGTTTGTTTGTT	-6	True	NA	9	True	NA	NA	NA	70404140	70423847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_70404207_70404354_70404547_70419913_70420100_70421715
transcript_22053.nnic	chr10	+	2643	4	NNC	ENSG00000148730.7	novel	7491	3	NA	NA	-4	-4704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	628.486188303998	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATTCTTGGAAAAACCTA	-6	True	NA	32	True	ATTAAA	-18	NA	70404140	70423914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_70404207_70404354_70404547_70419913_70420100_70421715
transcript_22054.known	chr10	+	7491	3	FSM	ENSG00000148730.7	ENST00000373218.5	7491	3	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_1	14	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTTTTAATTTTTTA	-2	True	NA	22	True	AGTAAA	-16	NA	70404144	70428618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70404547_70419913_70420100_70421715
transcript_22059.known	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	30.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-1	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70433089_70435285_70435984_70441474
transcript_22069.nnic	chr10	-	1791	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-805	297	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	76.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGCCTCAGGCTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	70442486	70432451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_22078.known	chr10	+	4610	20	FSM	ENSG00000107719.9	ENST00000263563.7	4610	20	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	17.1386718278331	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGGCTGCTAATAT	-34	True	NA	81	True	ATTAAA	-16	NA	70478766	70568450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70479060_70525922_70526137_70529228_70529332_70529888_70530069_70531289_70531455_70532620_70532782_70532994_70533071_70533921_70534074_70534424_70534525_70534738_70534844_70537810_70537907_70538279_70538409_70538891_70539009_70539091_70539248_70539579_70539763_70541101_70541243_70541462_70541535_70547305_70547447_70564363_70564520_70566580
transcript_22081.nnic	chr10	+	4527	20	NNC	ENSG00000107719.9	novel	4610	20	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_14	48.2748364450364	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGGCTGCTAATAT	NA	False	NA	81	True	ATTAAA	-16	NA	70478753	70568450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_70479060_70525922_70526137_70529228_70529332_70529888_70530069_70531289_70531455_70532620_70532782_70532994_70533071_70533921_70534074_70534424_70534525_70534738_70534844_70537810_70537907_70538279_70538409_70538891_70539009_70539091_70539248_70539675_70539763_70541101_70541243_70541462_70541535_70547305_70547447_70564363_70564520_70566580
transcript_22089.nnic	chr10	+	4427	19	NIC	ENSG00000107719.9	novel	4610	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_14	48.1332063710237	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGGCTGCTAATAT	-34	True	NA	81	True	ATTAAA	-16	NA	70478766	70568450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_70479060_70525922_70526137_70529228_70529332_70529888_70530069_70531289_70531455_70532620_70532782_70532994_70533071_70533921_70534074_70534424_70534525_70534738_70534844_70537810_70537907_70538279_70538409_70538891_70539009_70539091_70539248_70541101_70541243_70541462_70541535_70547305_70547447_70564363_70564520_70566580
transcript_22103.known	chr10	-	2492	3	FSM	ENSG00000180644.8	ENST00000373209.2	2492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGGTGGTGTTGTGG	159	False	NA	NA	False	AATAAA	-17	NA	70602759	70597347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70599182_70600363_70600907_70602644
transcript_22104.known	chr10	+	5557	22	FSM	ENSG00000138316.11	ENST00000373207.2	5557	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	4.53707328722002	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTGTGTGTTTCTTT	3	True	NA	5	True	TTTAAA	-40	NA	70672505	70762441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70672885_70674555_70674996_70702311_70702469_70708587_70708779_70729293_70729378_70730101_70730250_70732253_70732360_70733884_70734029_70735168_70735302_70736679_70736794_70738841_70738991_70740986_70741163_70743547_70743682_70744065_70744190_70745225_70745307_70749821_70749986_70751477_70751647_70752094_70752228_70753799_70754008_70757961_70758092_70758174_70758286_70760359
transcript_22108.known	chr10	+	5778	15	FSM	ENSG00000166224.17	ENST00000373202.8	5778	15	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	15.7201287838106	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTTACCTGT	5	True	NA	NA	False	AATAAA	-25	NA	70815947	70881184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70816127_70816810_70816881_70844472_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
transcript_22119.known	chr10	-	732	4	FSM	ENSG00000166228.9	ENST00000493228.1	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	268.130565210309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTCCGGGGGAAGGG	3315	False	NA	NA	False	NA	NA	NA	70888254	70883931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70887852
transcript_22120.known	chr10	-	787	4	FSM	ENSG00000166228.9	ENST00000299299.4	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	105.707142615814	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	16	True	NA	-7	True	AATAAA	-18	NA	70888565	70883509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70888530
transcript_22121.known	chr10	-	389	3	FSM	ENSG00000166228.9	ENST00000493961.5	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	277.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGGTCTCTTCAGTT	5670	False	NA	0	True	AATACA	-35	NA	70885899	70882279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70882486_70885151_70885233_70885797
transcript_22131.nnic	chr10	+	3575	18	NNC	ENSG00000107731.12	novel	6841	17	NA	NA	57044	-2919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.2531180175196	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACACAAAAAAAATAGAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	71269970	71299945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_71270061_71274457_71274516_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71288957_71288991_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_22136.known	chr10	+	6841	17	FSM	ENSG00000107731.12	ENST00000335350.10	6841	17	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_1	15.2146105766792	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTGCATTTGGCTGT	18	True	NA	17	True	AATAAA	-24	NA	71212569	71302864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71213065_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71288957_71288991_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_22138.nnic	chr10	+	3534	17	NNC	ENSG00000107731.12	novel	6841	17	NA	NA	57027	-2919	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	29.0621639765521	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACACAAAAAAAATAGAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	71269953	71299945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_71270061_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71288957_71288991_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_22139.nnic	chr10	+	3542	17	NNC	ENSG00000107731.12	novel	6841	17	NA	NA	57044	-2919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.8650755042271	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACACAAAAAAAATAGAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	71269970	71299945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_71270061_71274457_71274516_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_22141.known	chr10	+	6451	16	FSM	ENSG00000107731.12	ENST00000373192.4	6451	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	29.7331838561265	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTGCATTTGGCTGT	193	False	NA	17	True	AATAAA	-24	NA	71212926	71302864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71213065_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_2215.known	chr1	-	3695	21	FSM	ENSG00000171680.23	ENST00000535355.6	3695	21	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_20	14.1572419630379	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-4	True	NA	-1	True	TATAAA	-18	NA	6485469	6467121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485323
transcript_22151.known	chr10	-	647	2	FSM	ENSG00000237512.7	ENST00000447119.3	717	2	66	4	66	0	multi-exon	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	18	True	NA	-3	True	AAGAAA	-16	NA	71218228	71217223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71217636_71217993
transcript_22153.known	chr10	+	2256	6	FSM	ENSG00000198246.9	ENST00000373189.6	2256	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	17.8370401132026	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTCATTGATGTCT	3	True	NA	16	True	AATAAA	-16	NA	71319258	71363385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_22156.known	chr10	+	2621	6	FSM	ENSG00000198246.9	ENST00000479577.2	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	54.4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAAGGGCGTAATAAATA	-4	True	NA	-17	True	NA	NA	NA	71319281	71363352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319732_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_22159.known	chr10	+	2136	5	FSM	ENSG00000198246.9	ENST00000644591.1	2136	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	42.9243520626695	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	6	True	NA	-18	True	NA	NA	NA	71319261	71363351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71351561_71351789_71356080_71356244_71361953
transcript_22161.known	chr10	+	1927	4	FSM	ENSG00000198246.9	ENST00000644088.1	1927	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54.7133946630581	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATTGATGTCTCTGTT	-3	True	NA	21	True	AATAAA	-21	NA	71319282	71363390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71356080_71356244_71361953
transcript_22163.known	chr10	+	3954	26	FSM	ENSG00000107736.22	ENST00000299366.11	3954	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	6.33719180710194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGGCTGTTGTCTG	3	True	NA	6	True	AATGAA	-19	NA	71396936	71707510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71397319_71439826_71439899_71446317_71446396_71510081_71510225_71510953_71511002_71511119_71511213_71566741_71566937_71570789_71570919_71577913_71577993_71615503_71615617_71617204_71617394_71643860_71643867_71645830_71645981_71646458_71646618_71675111_71675177_71677455_71677694_71679386_71679493_71682444_71682573_71687646_71687720_71690467_71690585_71694146_71694260_71695417_71695526_71702021_71702212_71702548_71702695_71704910_71705131_71706896
transcript_22164.known	chr10	+	2000	14	FSM	ENSG00000107736.22	ENST00000461841.7	2000	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	7.07608690712316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAAGGGGCTCCCTTGAC	2	True	NA	NA	False	AATAAA	-15	NA	71396935	71646780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71397319_71439826_71439899_71446317_71446396_71510081_71510225_71510953_71511002_71511119_71511213_71566741_71566937_71570789_71570919_71577913_71577993_71615503_71615617_71617204_71617394_71643860_71643867_71645830_71645981_71646458
transcript_22165.known	chr10	-	4794	2	FSM	ENSG00000214688.6	ENST00000441508.4	4794	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTCATTCTTTA	0	True	NA	-1	True	AATAAA	-24	NA	71719778	71711700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71716343_71719626
transcript_22166.known	chr10	-	4714	7	FSM	ENSG00000107738.20	ENST00000394957.8	4714	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGTCTCCTGCTTCCT	9	True	NA	NA	False	AGTAAA	-20	NA	71773520	71747555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71751291_71751667_71751862_71752974_71753003_71755358_71755467_71760867_71760925_71761597_71762027_71773357
transcript_2218.known	chr1	-	3668	21	FSM	ENSG00000171680.23	ENST00000400913.6	3668	21	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_20	14.9748956590689	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-4	True	NA	-1	True	TATAAA	-18	NA	6485954	6467121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485835
transcript_22189.known	chr10	-	2748	14	FSM	ENSG00000197746.15	ENST00000394936.8	2748	14	0	0	0	0	multi-exon	FALSE	canonical	3	4305	junction_5	516.772013183248	4403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTAATGTTTCTGT	-3	True	NA	-28	True	AATAAA	-16	NA	71851251	71816297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822008_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_2219.known	chr1	-	3699	21	FSM	ENSG00000171680.23	ENST00000340850.10	3699	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_20	15.1178702203717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	7103	False	NA	-1	True	TATAAA	-18	NA	6490594	6467121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6490444
transcript_22232.known	chr10	-	2830	14	NNC	ENSG00000197746.15	novel	2748	14	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1487.63537795774	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCTAATGTTTCTG	9125	False	NA	28	True	AATAAA	-15	NA	71851325	71816298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822017_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_22233.known	chr10	+	525	2	FSM	ENSG00000230526.1	ENST00000441348.1	525	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCAGCTTCACTGTTTG	248	False	NA	NA	False	AGTAAA	-18	NA	71878355	71879107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71878486_71878712
transcript_22234.known	chr10	+	6934	3	FSM	ENSG00000122863.6	ENST00000373115.5	6934	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGCGTGTCTCTGCCT	-16	True	NA	13	True	ATTAAA	-25	NA	71964394	72013558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71964695_72005735_72005983_72007171
transcript_22235.known	chr10	-	5224	11	FSM	ENSG00000107742.14	ENST00000373109.7	5224	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.838664230798	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGCAATACTCTGAT	9279	False	72088560	0	True	AATAAA	-17	NA	72088551	72059033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311_72070427_72072143_72072259_72072502_72072549_72072901_72072911_72088139
transcript_22242.nic	chr10	-	2142	11	NIC	ENSG00000138303.18	novel	2270	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	52.2858489459624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	-20	True	NA	-13	True	ATTAAA	-15	NA	72216311	72096521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72097451_72102849_72102968_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_22246.nic	chr10	-	2134	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	32.9211553432713	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	1135	False	NA	-13	True	ATTAAA	-15	NA	72215996	72096521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_22247.known	chr10	-	2479	10	FSM	ENSG00000138303.18	ENST00000672957.1	2479	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	10.3863633293794	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTATGATCACA	15	True	NA	-26	True	AATAAA	-14	NA	72216276	72096031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_22251.known	chr10	-	1349	9	FSM	ENSG00000138303.18	ENST00000672940.1	1349	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	42.0029760850347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	14	True	NA	-10	True	CATAAA	-19	NA	72216277	72097042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_22256.known	chr10	+	3567	5	FSM	ENSG00000166295.9	ENST00000621663.4	3567	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	338.064342988136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	-29	True	NA	10	True	ATTAAA	-16	NA	72215999	72235858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72216139_72220053_72220380_72223887_72224057_72230365_72230441_72233000
transcript_22259.known	chr10	+	3231	4	FSM	ENSG00000166295.9	ENST00000299381.5	3231	4	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	218.474000487218	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTCTCATTGATCAC	-17	True	NA	12	True	ATTAAA	-18	NA	72216011	72235860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72216139_72223887_72224057_72230365_72230441_72233000
transcript_2226.nic	chr1	-	4221	20	NIC	ENSG00000171680.23	novel	3695	21	NA	NA	-71	0	intron_retention	FALSE	canonical	3	18	junction_19	14.0981914716067	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	6128	False	NA	-1	True	TATAAA	-18	NA	6485540	6467121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_6467573_6467824_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485323
transcript_22263.nic	chr10	+	623	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	-323	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGAATGTTTTGTTTAT	-43	True	NA	25	True	NA	NA	NA	72215985	72233292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_22264.nic	chr10	+	1091	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	-69	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTTCTTCTCATTGG	-43	True	NA	23	True	AATAAA	-32	NA	72215985	72233760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_22265.nic	chr10	+	1160	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	-43	True	NA	21	True	AATAAA	-21	NA	72215985	72233829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_22270.known	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	460.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	0	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72216073_72230365_72230441_72233000
transcript_22275.nnic	chr10	+	1043	3	NIC	ENSG00000166295.9	novel	3567	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	191	junction_1	406	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	-29	True	NA	21	True	AATAAA	-21	NA	72215999	72233829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_22277.nnic	chr10	+	393	2	NIC	ENSG00000166295.9	novel	734	3	NA	NA	-15	-13257	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAGCCAGGCAT	-44	True	NA	NA	False	AAAAAG	-15	NA	72215984	72220358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72220053
transcript_2228.nic	chr1	-	4145	20	NIC	ENSG00000171680.23	novel	3699	21	NA	NA	-5	0	intron_retention	FALSE	canonical	2	11	junction_19	15.1304576243562	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-10	True	NA	-1	True	TATAAA	-18	NA	6490585	6467121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_6467573_6467824_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6490444
transcript_22280.known	chr10	+	1744	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	4.5	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	1	True	NA	16	True	AATAAA	-17	NA	72273923	72276036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72274061_72274156_72274422_72274694
transcript_22281.known	chr10	+	1966	2	FSM	ENSG00000168209.6	ENST00000471240.2	1966	2	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAGACCTATGCAATAT	-3	True	NA	-39	True	AATACA	-14	NA	72273919	72275981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72274061_72274156
transcript_22282.known	chr10	+	1830	2	FSM	ENSG00000168209.6	ENST00000473155.2	1830	2	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAACAGTTGGTTGAG	1	True	NA	6	True	AATAAA	-7	NA	72273923	72276026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72274422_72274694
transcript_22283.known	chr10	+	1676	3	FSM	ENSG00000168209.6	ENST00000681898.1	1676	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	433	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	1	True	NA	16	True	AATAAA	-17	NA	72273923	72276036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72274061_72274224_72274422_72274694
transcript_22285.nic	chr10	-	2966	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	-57	-5	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	40.167617554443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGGTGGGTCTGCA	1	True	NA	-5	True	AATATA	-15	NA	72354976	72332834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_22286.known	chr10	-	2935	9	FSM	ENSG00000148719.16	ENST00000444643.8	2935	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	34.9919633630352	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAATATATGTTTA	-3	True	NA	-33	True	NA	NA	NA	72354919	72332862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72334618_72335779_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_22289.nic	chr10	-	1466	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	3	18	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	40.167617554443	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCACAGCTGCCCTCTC	NA	False	NA	-6	True	ATTAAA	-19	NA	72355146	72334504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_22290.known	chr10	-	4360	8	FSM	ENSG00000148719.16	ENST00000338820.7	4360	8	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	8.3397254396151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGGTCTGCATTGAG	NA	False	NA	0	True	AATATA	-20	NA	72355149	72332829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_223.known	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_3	1474.61759110625	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
transcript_22301.known	chr10	-	2357	12	FSM	ENSG00000107745.20	ENST00000361114.10	2357	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	22.4370561260453	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTCCTTTATTTTAG	-2	True	NA	-13	True	AATAAA	-14	NA	72626079	72367339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_22308.known	chr10	-	580	3	FSM	ENSG00000107745.20	ENST00000604025.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	6.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCTAGGACCAATAA	3	True	NA	NA	False	NA	NA	NA	72626074	72562710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72563064_72566632_72566795_72626009
transcript_22311.known	chr10	-	2488	12	NNC	ENSG00000107745.20	novel	2357	12	NA	NA	-60	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	85.9622250307157	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGGTCCTCTAGGCC	NA	False	NA	0	True	AATAAA	-27	NA	72626191	72367326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508272_72533741_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_22314.known	chr10	+	2949	8	FSM	ENSG00000156026.15	ENST00000373053.8	2937	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	409	junction_7	45.9467304692763	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAGCATCTCATTCTTTA	-9	True	NA	7	True	AATAAA	-20	NA	72692130	72887694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72692302_72834358_72834429_72859176_72859348_72860422_72860528_72868702_72868864_72871376_72871581_72884265_72884383_72885744
transcript_22315.known	chr10	+	619	1	FSM	ENSG00000279502.1	ENST00000624201.1	619	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	5025	False	NA	NA	False	AAAAAG	-3	NA	72756397	72757016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72756400_72757000
transcript_22317.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000373008.6	2727	15	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_7	27.4408454680245	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	488	False	NA	-15	True	TTTAAA	-5	NA	73096850	73007216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_22319.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000307116.6	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	58.8883412459026	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	488	False	NA	-15	True	TTTAAA	-5	NA	73096850	73007216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_22325.known	chr10	-	2844	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.0190415611415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	364	False	NA	-22	True	NA	NA	NA	73096974	73007223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_22326.known	chr10	-	2743	15	FSM	ENSG00000122884.13	ENST00000394890.7	2743	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	75.4713420404577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-2	True	NA	-15	True	TTTAAA	-5	NA	73096866	73007216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_22330.known	chr10	+	5455	14	FSM	ENSG00000138286.15	ENST00000242505.11	5455	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	19.0440162836787	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGCA	-2	True	NA	NA	False	AAAAAG	-3	NA	73168118	73244504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73168387_73174686_73174792_73177845_73177976_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228185_73230421_73230526_73232938_73233164_73234816_73234941_73235192_73235319_73239311_73239385_73240945
transcript_22333.known	chr10	-	3006	14	FSM	ENSG00000122882.11	ENST00000372979.9	3006	14	0	0	0	0	multi-exon	TRUE	canonical	3	440	junction_8	31.7819866363985	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTTTACAGACAGCTC	-4	True	NA	-23	True	ATTAAA	-13	NA	73168008	73133667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73163732_73163951_73167865
transcript_22335.nic	chr10	-	1992	13	NIC	ENSG00000122882.11	novel	3006	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	132.289744080518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTTAGATTACTCA	-4	True	NA	-15	True	AATAAA	-22	NA	73168068	73134523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73167865
transcript_22338.known	chr10	-	1679	12	FSM	ENSG00000122882.11	ENST00000484976.6	1679	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	188.404698928961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTTAGATTACTCA	369	False	NA	-15	True	AATAAA	-22	NA	73167948	73134523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73156274_73156454_73156567_73156656_73160433_73160552_73167865
transcript_2234.nic	chr1	-	2567	2	ISM	ENSG00000171680.23	ENST00000400915.8	3731	22	-11	26997	-11	2379	5prime_fragment	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGGTGGTGG	-7	True	NA	NA	False	NA	NA	NA	6497435	6494118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_6496570_6497319
transcript_22341.known	chr10	+	2101	9	FSM	ENSG00000166321.14	ENST00000357321.9	2101	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.09748712602592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTCTGATGTCTTTT	0	True	NA	NA	False	AATAAA	-14	NA	73110454	73131823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73125397_73125510_73126672_73126828_73130702
transcript_22344.known	chr10	+	1919	8	FSM	ENSG00000166321.14	ENST00000372997.3	1919	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.74664220738176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	17	False	NA	NA	False	AATAAA	-19	NA	73110529	73131828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73126672_73126828_73130702
transcript_2235.known	chr1	-	2664	9	FSM	ENSG00000171680.23	ENST00000487949.4	2664	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	12.4291743490869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-2	True	NA	-1	True	TATAAA	-18	NA	6471583	6467121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989
transcript_22352.known	chr10	-	2295	5	FSM	ENSG00000213551.7	ENST00000372950.6	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	11.7765657133139	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCTGCATTCATGAAT	25	True	NA	0	True	AATAAA	-19	NA	73247255	73241953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009
transcript_22354.nnic	chr10	-	1852	4	NNC	ENSG00000182180.14	novel	2579	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	640.868161168894	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCGTAGCAAATGTATA	NA	False	NA	-25	True	AATAAA	-26	NA	73252695	73248842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_73249206_73249989_73250992_73251762_73252024_73252469
transcript_22357.known	chr10	+	548	3	FSM	ENSG00000227540.1	ENST00000457758.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTTCACATTATTA	219	False	NA	14	True	ATTAAA	-20	NA	73253031	73254344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73253064_73253190_73253255_73253892
transcript_22359.known	chr10	-	866	3	FSM	ENSG00000182180.14	ENST00000372940.3	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	675.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACATAATTTGGCTA	NA	False	NA	-120	True	AAAAAG	-3	NA	73252693	73248937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73249319_73251762_73252024_73252469
transcript_22360.known	chr10	-	2579	3	FSM	ENSG00000182180.14	ENST00000372945.8	2579	3	0	0	0	0	multi-exon	FALSE	canonical	3	1218	junction_1	129	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATTTTCCGTAGCAAA	-18	True	NA	-31	True	AATAAA	-20	NA	73252644	73248848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73250992_73251762_73252024_73252469
transcript_22361.known	chr10	-	612	3	FSM	ENSG00000182180.14	ENST00000473427.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	606.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGCCCTTGCTCTTCT	-8	True	NA	-19	True	AATAAA	-11	NA	73252634	73250743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73250992_73251762_73252024_73252531
transcript_22363.known	chr10	+	762	2	FSM	ENSG00000227540.1	ENST00000457147.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	9	True	NA	19	True	ATTAAA	-25	NA	73252790	73254349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73253096_73253892
transcript_22365.known	chr10	+	635	2	FSM	ENSG00000227540.1	ENST00000394864.2	635	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	356	False	NA	19	True	ATTAAA	-25	NA	73253168	73254349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73253255_73253800
transcript_22368.known	chr10	-	2174	14	FSM	ENSG00000138279.16	ENST00000372919.8	2174	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	340.764334050597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-11	True	NA	-26	True	AATAAA	-13	NA	73414067	73375444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396043_73396110_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_22370.known	chr10	-	2443	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_12	122.406767242121	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTGTGTCTGGCT	-2	True	NA	-7	True	TATAAA	-13	NA	73414058	73375100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_22374.nic	chr10	-	2056	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	260.379252959795	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-14	True	NA	-26	True	AATAAA	-13	NA	73414070	73375444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_22378.nic	chr10	-	1717	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-3	-135	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	260.379252959795	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTGTGTAATAATATT	-14	True	NA	-3	True	AATAAA	-16	NA	73414070	73375783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_22393.known	chr10	-	3519	14	FSM	ENSG00000107758.16	ENST00000360663.10	3519	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	18.7575625774287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTCCTATCATTCC	-24	True	NA	NA	False	AAGAAA	-15	NA	73496024	73436432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73438421_73439871_73439902_73444724_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_22394.known	chr10	-	3149	14	FSM	ENSG00000107758.16	ENST00000394829.6	3149	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	19.4525671021566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	-24	True	NA	-5	True	AATAAA	-25	NA	73496024	73436805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73438421_73439871_73439902_73444724_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_22395.known	chr10	-	3119	13	FSM	ENSG00000107758.16	ENST00000394828.6	3119	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	21.2895057611856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	-24	True	NA	-5	True	AATAAA	-25	NA	73496024	73436805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73438421_73444724_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_22396.known	chr10	-	2418	12	FSM	ENSG00000107758.16	ENST00000342558.3	2418	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	15.3094795891061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTCATTGAATATTTT	4	True	NA	2	True	AATAAA	-29	NA	73495996	73443779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_22397.nic	chr10	-	2463	12	ISM	ENSG00000107758.16	ENST00000394828.6	3119	13	-14	6974	-14	0	5prime_fragment	FALSE	canonical	3	34	junction_2	16.4763792861225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTCATTGAATATTTT	2036	False	NA	2	True	AATAAA	-29	NA	73496038	73443779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_22399.nnic	chr10	-	1485	7	Fusion	ENSG00000177791.12_ENSG00000166317.12	novel	1300	6	NA	NA	3543	0	multi-exon	FALSE	canonical	3	26	junction_5	3.43592135468138	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	8605	False	NA	32	True	AATGAA	-43	NA	73647486	73631611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
transcript_224.known	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	5737	junction_1	1441.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_56098_78841_78964_114680
transcript_22407.nic	chr10	-	1418	4	ISM	ENSG00000242338.6	ENST00000584747.5	1716	10	-35	9368	-35	-8096	5prime_fragment	FALSE	canonical	0	0	junction_3	40.4062701404951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGACGCAGTGGCTCAT	-12	True	NA	NA	False	AATAAA	-39	NA	73730504	73725210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730315
transcript_22409.nic	chr10	-	1291	4	ISM	ENSG00000271816.1	ENST00000580790.1	1913	12	-33	26060	-33	-26060	5prime_fragment	FALSE	canonical	3	16	junction_3	33.5294232312789	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGACGCAGTGGCTCAT	NA	False	NA	NA	False	AATAAA	-39	NA	73730520	73725210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730458
transcript_22410.known	chr10	-	1716	10	FSM	ENSG00000242338.6	ENST00000584747.5	1716	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.0817815337941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACAGTGAAATAGATGT	23	True	NA	NA	False	AATAAA	-18	NA	73730469	73715842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73716181_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730315
transcript_22412.known	chr10	+	896	2	FSM	ENSG00000250959.3	ENST00000507952.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCCCTCCTCACGTCAG	-18	True	NA	NA	False	NA	NA	NA	73730561	73731771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73730874_73731187
transcript_22413.known	chr10	-	1236	1	FSM	ENSG00000279088.1	ENST00000625041.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	82	False	NA	-34	True	NA	NA	NA	73744230	73742994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73743000_73744200
transcript_22419.known	chr10	+	4513	24	FSM	ENSG00000176986.16	ENST00000339365.2	4513	24	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	130.620881733364	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	1	True	NA	16	True	AATAAA	-17	NA	73744390	73772161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73744438_73746629_73746717_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_2242.known	chr1	-	6627	12	FSM	ENSG00000162408.11	ENST00000377705.6	6627	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	14.3923763106642	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGTGTAATTTTATG	10	True	NA	0	True	ATTAAA	-19	NA	6554513	6521346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6526004_6526695_6526830_6528993_6529172_6531967_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
transcript_22423.known	chr10	+	4445	23	FSM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_12	47.1211073758945	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-18	True	NA	16	True	AATAAA	-17	NA	73744371	73772161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_22442.nnic	chr10	+	2144	4	NNC	ENSG00000196968.11	novel	2071	3	NA	NA	0	-1157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.5777619273972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTCAAAAATATATCTAAG	-25	True	NA	NA	False	ACTAAA	-18	NA	73772275	73779094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_73773042_73773189_73773816_73775540_73776026_73778827
transcript_22443.nnic	chr10	+	2577	4	NNC	ENSG00000196968.11	novel	2071	3	NA	NA	0	1106	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	15.5777619273972	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAGGAAAAAAAGTGCAAA	-25	True	NA	NA	False	NA	NA	NA	73772275	73777325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_73773042_73773189_73773816_73775540_73776343_73776942
transcript_22445.known	chr10	+	2071	3	FSM	ENSG00000196968.11	ENST00000372841.8	2071	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTTACTTATTTAT	-25	True	NA	35	True	NA	NA	NA	73772275	73776219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73773042_73773189_73773816_73775540
transcript_22451.known	chr10	+	2408	2	FSM	ENSG00000196968.11	ENST00000465695.1	2408	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGATGCTACTTCATTTT	263	False	NA	68	True	AATAAA	-26	NA	73772563	73775123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73773042_73773193
transcript_22452.known	chr10	+	850	3	FSM	ENSG00000172586.8	ENST00000372833.6	850	3	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	118.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCAGATATGTTT	-11	True	NA	8	True	AATAAA	-21	NA	73782047	73783652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73782200_73782322_73782442_73783073
transcript_22453.known	chr10	+	1202	2	FSM	ENSG00000172586.8	ENST00000372837.3	1202	2	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCCTTTTGTTGTGA	-12	True	NA	15	True	AATAAA	-14	NA	73782046	73783371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73782200_73782322
transcript_22457.known	chr10	+	6052	26	FSM	ENSG00000214655.11	ENST00000604729.6	6052	26	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_13	14.672750253446	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGACCTGGGCCTTTCCCT	7	True	NA	17	True	TATAAA	-25	NA	73785605	73801793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794540_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800171_73800295_73800473_73800639_73800760_73801016_73801196_73801315
transcript_22458.known	chr10	+	6062	26	FSM	ENSG00000214655.11	ENST00000398706.6	6062	26	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	15.3979738926912	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGCCTTTCCCTTCTT	25	True	NA	21	True	TATAAA	-29	NA	73785623	73801797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794540_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800195_73800295_73800473_73800639_73800760_73801016_73801196_73801315
transcript_22460.known	chr10	+	6004	26	FSM	ENSG00000214655.11	ENST00000605216.5	6004	26	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	15.5442079244972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	17	False	NA	16	True	TATAAA	-24	NA	73785661	73801792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794555_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800195_73800295_73800473_73800639_73800760_73801016_73801196_73801315
transcript_22476.known	chr10	-	3758	15	FSM	ENSG00000166507.19	ENST00000309979.11	3758	15	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	10.3354452526937	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTCTGCCTCCCTGG	-4	True	NA	-6	True	AATAAA	-15	NA	73811598	73801915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73802577_73802673_73802777_73802971_73803082_73803188_73803360_73803573_73803749_73803892_73804017_73804772_73804870_73805586_73805770_73805899_73806029_73806288_73806475_73806656_73806812_73807107_73807196_73807383_73808730_73810798_73810904_73811473
transcript_22480.nic	chr10	-	3975	15	NIC	ENSG00000166507.19	novel	3758	15	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	20.9266210695314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTCTGCCTCCCTGG	NA	False	NA	-6	True	AATAAA	-15	NA	73811852	73801915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73802577_73802673_73802777_73803008_73803082_73803188_73803360_73803573_73803749_73803892_73804017_73804772_73804870_73805586_73805770_73805899_73806029_73806288_73806475_73806656_73806812_73807107_73807196_73807383_73808730_73810798_73810904_73811473
transcript_22498.known	chr10	-	545	2	FSM	ENSG00000166507.19	ENST00000398701.2	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGCAAGTTGTAATTT	35	False	NA	2	True	ATTAAA	-24	NA	73811798	73810683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73810904_73811473
transcript_225.known	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV8001_+_0_8000
transcript_22507.known	chr10	-	3818	21	FSM	ENSG00000148660.21	ENST00000322680.7	3818	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	23.4198099906895	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-9	True	NA	-1	True	AATAAA	-18	NA	73874591	73812500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73819531_73819646_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_22521.nnic	chr10	-	1952	20	NNC	ENSG00000148660.21	novel	1820	21	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	20.5919329066269	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	73874650	73814287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873060_73874396
transcript_22522.nic	chr10	-	1977	20	NIC	ENSG00000148660.21	novel	1820	21	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	10.8928297339208	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	73874651	73814287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_22524.nic	chr10	-	1935	20	NIC	ENSG00000148660.21	novel	1820	21	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	17.9205695892857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	73874651	73814287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825320_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_22527.known	chr10	-	1822	20	FSM	ENSG00000148660.21	ENST00000372765.5	1822	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	28.8796336714514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	80	False	NA	NA	False	AAGAAA	-10	NA	73874502	73814287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73839538_73839602_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_22541.known	chr10	-	3563	19	FSM	ENSG00000148660.21	ENST00000351293.7	3563	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	17.5657495016739	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	16	True	NA	-1	True	AATAAA	-18	NA	73874519	73812500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_22558.known	chr10	+	2343	11	FSM	ENSG00000122861.16	ENST00000372764.4	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	12.0203993278094	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATCTCCCTGGTGCT	-1	True	NA	22	True	AATAAA	-29	NA	73911131	73917494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73911219_73911524_73911613_73912040_73912069_73912214_73912323_73912923_73913099_73913289_73913382_73913538_73913759_73913979_73914129_73914775_73914917_73915250_73915400_73916388
transcript_22559.nnic	chr10	+	2708	11	NIC	ENSG00000122861.16	novel	2343	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	28.6078660511406	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATCTCCCTGGTGCT	287	False	NA	22	True	AATAAA	-29	NA	73911079	73917494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_73911219_73911524_73911926_73912040_73912069_73912214_73912323_73912923_73913099_73913289_73913382_73913538_73913759_73913979_73914129_73914775_73914917_73915250_73915400_73916388
transcript_22560.nnic	chr10	+	2466	11	NNC	ENSG00000122861.16	novel	468	5	NA	NA	188	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	27.7048732175406	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATCTCCCTGGTGCT	0	True	NA	22	True	AATAAA	-29	NA	73910792	73917494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_73911003_73911524_73911613_73912040_73912069_73912214_73912323_73912923_73913099_73913289_73913382_73913538_73913759_73913979_73914129_73914775_73914917_73915250_73915400_73916388
transcript_22571.known	chr10	+	5497	22	FSM	ENSG00000035403.18	ENST00000211998.10	5497	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	373.280456653878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGATATGTTACTTTAG	-7	True	NA	15	True	AATAAA	-28	NA	73998115	74120169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74111908_74112113_74114183_74114388_74114794_74114900_74118022
transcript_22576.known	chr10	+	6489	21	FSM	ENSG00000035403.18	ENST00000372755.7	6489	21	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_5	98.3091552196437	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGCAGGAAAGAATCATTT	-9	True	NA	4	True	AATAAA	-17	NA	73998113	74121363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74114183_74114388_74114794_74114900_74118022
transcript_22596.nnic	chr10	-	3869	10	NIC	ENSG00000185009.13	novel	2320	10	NA	NA	-16	1198	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	140.74808947676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGATTTTTTTTAGGT	470	False	NA	-13	True	AATAAA	-14	NA	74150773	74121765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150334
transcript_22597.known	chr10	-	2320	10	FSM	ENSG00000185009.13	ENST00000372745.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	122.278774795269	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-26	True	NA	-14	True	ATTAAA	-10	NA	74150842	74122963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150754
transcript_226.known	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV8002_+_0_8000
transcript_22602.known	chr10	-	4889	9	FSM	ENSG00000185009.13	ENST00000355264.9	4889	9	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	90.1622669136042	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGGATTAGTTTCATT	-12	True	NA	-5	True	AATAAA	-18	NA	74150828	74120254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150754
transcript_22606.known	chr10	+	1992	11	FSM	ENSG00000156110.15	ENST00000539909.6	1992	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	86.7179912128965	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	-1	True	NA	10	True	AATAAA	-19	NA	74151220	74709290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_22610.known	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	58.5050425177181	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	2	True	NA	10	True	AATAAA	-19	NA	74176762	74709290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_22614.known	chr10	+	2494	10	FSM	ENSG00000156110.15	ENST00000673352.1	2494	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	161.630885692916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGGCAAGATCAC	5	False	NA	NA	False	NA	NA	NA	74151239	74709926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74670182_74670270_74708320
transcript_22616.known	chr10	+	1249	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	157.143953820127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTTTTATTTCAT	NA	False	NA	7	True	ATTAAA	-18	NA	74151201	74708699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_22625.known	chr10	+	1188	10	FSM	ENSG00000156110.15	ENST00000673027.1	1188	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.343974812614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTCCTACTATAATAAT	2	True	NA	NA	False	AATAAA	-19	NA	74176762	74708539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74176887_74200763_74200839_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_22633.known	chr10	+	8209	18	FSM	ENSG00000156650.14	ENST00000648725.1	8209	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.9755697341263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTAGCCTCTTGTGT	5	True	NA	9	True	AATAAA	-11	NA	74824935	75032284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74825357_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74976331_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
transcript_22634.known	chr10	+	2847	16	FSM	ENSG00000156650.14	ENST00000648899.1	2847	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	12.0037031323208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAGGAAGAAGAAG	-13	True	NA	NA	False	NA	NA	NA	74825557	75022137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74825675_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975455_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880
transcript_22641.known	chr10	+	2715	15	FSM	ENSG00000156650.14	ENST00000647666.1	2715	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	21.0286490681797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAGGAGGAAGAAG	0	True	NA	NA	False	NA	NA	NA	74826599	75022098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74826786_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975455_74977315_74977438_74979223_74979340_74981786_74981929_74989018_74989113_75020581_75020814_75021125_75021286_75021880
transcript_22647.known	chr10	+	6761	6	FSM	ENSG00000156671.15	ENST00000542569.6	6761	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	24.1876001289917	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTCTTATTGAAAT	1	True	NA	NA	False	AATAAA	-17	NA	75111655	75182123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_75111723_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_22660.known	chr10	+	1557	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-45	0	-24	0	multi-exon	FALSE	canonical	3	2595	junction_4	163.671079370249	905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTCCAAGTATTTG	125	False	NA	14	True	AATAAA	-15	NA	75210750	75231448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_22676.known	chr10	-	1250	7	FSM	ENSG00000165644.11	ENST00000372538.8	1250	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	27.4752413799932	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGGTGTCACTTGTGTG	-2	True	NA	NA	False	NA	NA	NA	75235957	75233640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235615_75235744_75235834
transcript_22678.nnic	chr10	-	884	6	NIC	ENSG00000165644.11	novel	1250	7	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_5	52.6520654865505	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	75236049	75233970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235834
transcript_22680.nnic	chr10	-	776	5	NIC	ENSG00000165644.11	novel	1250	7	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	58.2811075735525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	75236047	75233970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235834
transcript_22682.known	chr10	-	539	4	FSM	ENSG00000165644.11	ENST00000494596.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.2440191206499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGACCTCCTGAGCCTC	19	True	NA	-16	True	AATAAA	-13	NA	75235936	75233977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235834
transcript_22683.known	chr10	-	871	7	FSM	ENSG00000165644.11	ENST00000469299.1	871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.3046959295419	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACACACGACCTCCTG	-2	True	NA	-22	True	AATAAA	-7	NA	75235925	75233983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235619_75235744_75235834
transcript_22684.known	chr10	-	796	5	FSM	ENSG00000165644.11	ENST00000470947.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	11.1439445440113	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACACACGACCTCCTG	522	False	NA	-22	True	AATAAA	-7	NA	75235512	75233983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266
transcript_22685.known	chr10	-	3205	2	FSM	ENSG00000165655.17	ENST00000372524.5	3205	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATCTTTTTTATTTT	-5	True	NA	NA	False	ATTAAA	-39	NA	75401764	75397829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75400375_75401104
transcript_22687.known	chr10	-	2963	2	FSM	ENSG00000156113.24	ENST00000480683.2	2963	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACCTCTCTGGTGTCTA	1082	False	NA	-10	True	AATAAA	-22	NA	77637821	77634109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_77636516_77637264
transcript_22688.known	chr10	-	1269	2	FSM	ENSG00000156113.24	ENST00000618048.2	1269	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGCCAGCTGCCTT	21	True	NA	NA	False	AATAAA	-21	NA	77637725	77636198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_77637007_77637264
transcript_2269.nic	chr1	+	2287	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	31.246759832021	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	NA	False	NA	22	True	AATAAA	-24	NA	6579966	6589280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6580050_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_22691.known	chr10	-	6610	31	FSM	ENSG00000148606.14	ENST00000372371.8	6610	31	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_18	24.2502004573616	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGAATAGTTACAAATT	-9	True	NA	-30	True	AATAAA	-23	NA	78029515	77975148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_77977627_77980140_77980274_77981427_77981560_77982153_77982319_77982652_77982818_77983919_77984013_77984204_77984299_77985169_77985341_77985902_77985986_77986072_77986160_77991053_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_227.known	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV8003_+_0_8000
transcript_22705.nic	chr10	-	3054	21	ISM	ENSG00000148606.14	ENST00000372371.8	6610	31	-44	15904	-44	56	5prime_fragment	FALSE	canonical	3	172	junction_8	19.1673550601015	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCTGCCAGGTGCTGG	7738	False	NA	NA	False	NA	NA	NA	78029559	77991052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_22712.known	chr10	+	583	7	FSM	ENSG00000138326.21	ENST00000645440.1	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	5092.23546195578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	-1	True	NA	18	True	AATAAA	-17	NA	78033835	78040701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964_78037983_78040203_78040226_78040614
transcript_22714.known	chr10	+	534	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	0	0	0	multi-exon	FALSE	canonical	3	3781	junction_4	3716.40794316232	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	-1	True	NA	14	True	AATAAA	-13	NA	78033862	78040697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
transcript_22717.known	chr10	+	634	5	FSM	ENSG00000138326.21	ENST00000613865.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_4	2889.48874154235	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	NA	False	NA	33	True	AATAAA	-32	NA	78033759	78040716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_22719.known	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5095.61463417319	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	28	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_22722.known	chr10	+	1008	4	FSM	ENSG00000138326.21	ENST00000478655.6	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	9029	junction_1	1430.73159218943	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTGTTCTGTGAACT	-1	True	NA	NA	False	AATAGA	-32	NA	78033862	78037883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193
transcript_22724.known	chr10	+	1104	3	FSM	ENSG00000138326.21	ENST00000466129.6	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	9029	junction_1	1522	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTCGTAATCCGCC	22	False	NA	NA	False	NA	NA	NA	78033885	78036529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510
transcript_22726.known	chr10	+	714	4	FSM	ENSG00000138326.21	ENST00000475468.6	714	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5687.028886471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCAAGAAAGCAACGAAAG	15	False	NA	-23	True	AAAAAG	-2	NA	78033903	78037218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78034317_78035351_78035418_78035510_78035721_78037193
transcript_22727.known	chr10	+	605	3	FSM	ENSG00000138326.21	ENST00000646254.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_1	5791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAGAAAAAGTTATTTC	321	False	NA	NA	False	AAAAAG	-39	NA	78034209	78035837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78034422_78035351_78035418_78035510
transcript_22728.known	chr10	+	656	6	FSM	ENSG00000138326.21	ENST00000435275.5	656	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	4766.10866011257	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTGCAGTTTCCT	NA	False	NA	30	True	AATAAA	-29	NA	78033759	78040713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040200_78040226_78040614
transcript_22729.known	chr10	+	2712	5	FSM	ENSG00000138326.21	ENST00000440692.6	2712	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4943.17597805298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGTTGGTTTATCTGT	-1	True	NA	26	True	AATAAA	-22	NA	78033862	78056813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78054530
transcript_2273.nic	chr1	+	2283	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	23.9674779649424	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-22	True	NA	22	True	AATAAA	-24	NA	6579991	6589280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6580071_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_22731.nic	chr10	+	2064	7	ISM	ENSG00000108175.19	ENST00000334512.10	7615	25	28	99074	28	-73640	5prime_fragment	FALSE	canonical	3	67	junction_1	12.8279209365959	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAAAGTACCTAGCACC	9	True	NA	NA	False	AAAAAG	-12	NA	79068993	79217445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_79069271_79118914_79119025_79139681_79139778_79162052_79162134_79201583_79201693_79208335_79208450_79216168
transcript_22733.known	chr10	+	821	6	FSM	ENSG00000108179.14	ENST00000448165.1	821	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	118.264111208769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGCATTGCCTGTGAT	130	False	NA	NA	False	NA	NA	NA	79347657	79354086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353644
transcript_22735.known	chr10	+	2196	6	FSM	ENSG00000108179.14	ENST00000225174.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	20.9322717352895	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGTCTCAAGTATTT	-2	True	NA	NA	False	AATAAA	-1	NA	79347468	79355334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353706
transcript_2274.nnic	chr1	+	2262	11	NNC	ENSG00000204859.13	novel	2347	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	33.1887028972209	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-22	True	NA	22	True	AATAAA	-24	NA	6579991	6589280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6580071_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587225_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_22740.known	chr10	-	4930	4	FSM	ENSG00000165424.7	ENST00000372336.4	4930	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.11805216802087	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCACAGGTTTCCTTG	21	True	NA	-1	True	ATTAAA	-20	NA	79445624	79382324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79386459_79394275_79394441_79432557_79432759_79445194
transcript_22742.known	chr10	-	993	7	FSM	ENSG00000225484.7	ENST00000670682.1	993	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	63.9678738812608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGGTGTGGTGGCTCA	297	False	NA	-27	True	AATAAA	-13	NA	79826282	79691503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79692057_79766270_79766325_79804484_79804528_79806038_79806123_79808762_79808833_79814612_79814717_79826197
transcript_22745.known	chr10	-	4096	6	FSM	ENSG00000225484.7	ENST00000665716.1	4096	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	22.6627447587445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCACACTTTTCTTGGT	95	False	NA	NA	False	AATAGA	-31	NA	79826484	79762820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79766325_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_22749.known	chr10	-	716	6	FSM	ENSG00000225484.7	ENST00000496359.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	48.5962961551598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATGGTTCTATCTGGC	291	False	NA	NA	False	GATAAA	-14	NA	79826288	79797707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_22750.known	chr10	-	867	5	FSM	ENSG00000225484.7	ENST00000483080.6	867	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	66.8407622637564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	282	False	NA	-13	True	ATTAAA	-24	NA	79826297	79765788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79766325_79804484_79804528_79806038_79806123_79814612_79814717_79826197
transcript_22752.known	chr10	+	1701	1	FSM	ENSG00000272447.1	ENST00000605920.1	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCATCTTAATTTGAGT	NA	False	NA	NA	False	NA	NA	NA	79825901	79827602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_79825900_79827600
transcript_22759.known	chr10	-	3121	6	FSM	ENSG00000230091.6	ENST00000412298.5	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.22374241638857	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTTTTATTCTCGC	99	False	NA	NA	False	AATACA	-19	NA	80078895	80046859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80049179_80053395_80053587_80055915_80056127_80056318_80056406_80060789_80060934_80078726
transcript_2276.known	chr1	+	2347	11	FSM	ENSG00000204859.13	ENST00000377674.9	2347	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	25.2142816673408	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-20	True	NA	22	True	AATAAA	-24	NA	6579993	6589280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_22761.known	chr10	+	860	5	FSM	ENSG00000133678.14	ENST00000372275.5	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	202.43887966495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCTGCACTAAGATAAAG	3	True	NA	NA	False	NA	NA	NA	80078681	80091335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_22763.known	chr10	+	785	5	FSM	ENSG00000133678.14	ENST00000476173.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	191.108607864743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACACTTCCACTATAT	22	False	NA	NA	False	NA	NA	NA	80079294	80091352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_22764.known	chr10	+	847	5	FSM	ENSG00000133678.14	ENST00000463029.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	209.078932463316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTGACACTTCCACTA	0	True	NA	NA	False	NA	NA	NA	80079272	80091349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80079308_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_22767.known	chr10	+	2041	4	FSM	ENSG00000133678.14	ENST00000372281.8	2041	4	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	33.6683167912439	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGCTTTTCTTGTAT	-14	True	NA	26	True	AATAAA	-20	NA	80078664	80092551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090796
transcript_22768.known	chr10	+	1963	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	196.224927627002	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	-3	True	NA	32	True	AATAAA	-26	NA	80079269	80092557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
transcript_2277.nnic	chr1	+	2326	11	NNC	ENSG00000204859.13	novel	2347	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	33.9536448706174	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-20	True	NA	22	True	AATAAA	-24	NA	6579993	6589280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587225_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_22771.known	chr10	+	776	4	FSM	ENSG00000189129.14	ENST00000372263.4	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.4419672692682	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTATGAAGTGAAAT	0	True	NA	20	True	ATTAAA	-25	NA	80132729	80145359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80132827_80142081_80142180_80144222_80144344_80144899
transcript_22775.known	chr10	+	534	4	FSM	ENSG00000189129.14	ENST00000372270.6	534	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	95.030989097709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCCTCCTCTCACTCC	13	False	NA	47	True	NA	NA	NA	80131681	80145064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80131832_80142081_80142180_80144222_80144344_80144899
transcript_22800.known	chr10	-	6734	16	FSM	ENSG00000122359.18	ENST00000422982.8	6734	16	0	0	0	0	multi-exon	TRUE	canonical	3	234	junction_15	78.1723452095148	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	-2	True	NA	-3	True	AATAAA	-18	NA	80205537	80150888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80176106_80176156_80205342
transcript_22805.known	chr10	-	6720	15	FSM	ENSG00000122359.18	ENST00000372231.7	6720	15	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_14	64.3610669487036	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	1	True	NA	-3	True	AATAAA	-18	NA	80205572	80150888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80205342
transcript_22829.known	chr10	+	2161	2	FSM	ENSG00000237523.2	ENST00000422847.1	2161	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGGCTCTGCGTGAATT	2	True	NA	NA	False	AATAAA	-17	NA	80207709	80219657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80208232_80218018
transcript_22830.known	chr10	-	3384	9	FSM	ENSG00000151224.13	ENST00000372213.8	3384	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	3.78937659780603	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	-3	True	NA	-1	True	AATAAA	-18	NA	80289658	80271819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80273884_80274519_80274654_80275016_80275200_80276375_80276595_80280172_80280317_80280679_80280793_80283915_80284039_80285511_80285590_80289332
transcript_22832.known	chr10	+	439	4	FSM	ENSG00000133665.13	ENST00000411538.5	439	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.93025150224688	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTGATTCCAGGAATGC	142	False	NA	NA	False	NA	NA	NA	80356772	80366794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80356826_80362434_80362591_80362950_80363074_80366687
transcript_22837.known	chr10	+	5801	6	FSM	ENSG00000122378.14	ENST00000606162.6	5801	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	89.1008417468657	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGATT	25	True	NA	11	True	AATAAA	-25	NA	80408550	80437115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_22845.known	chr10	+	16221	11	FSM	ENSG00000108219.15	ENST00000372158.6	16221	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	110.423910454213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTCATTTTTCTCCG	-4	True	NA	NA	False	TATAAA	-17	NA	80454309	80533124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80463087_80463128_80468546_80468688_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_22849.nnic	chr10	+	2748	10	NIC	ENSG00000108219.15	novel	16221	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	69	junction_1	80.2077549281694	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTTTTGGTCATTTT	93	False	NA	13	True	AATATA	-11	NA	80454246	80519628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_80454372_80468546_80468688_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_22852.known	chr10	+	16183	9	FSM	ENSG00000108219.15	ENST00000429989.7	16183	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	32.124756808418	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTCATTTTTCTCC	12	False	NA	NA	False	TATAAA	-16	NA	80454165	80533123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_22856.known	chr10	+	1037	8	FSM	ENSG00000108219.15	ENST00000341863.10	1037	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	92.6141876555749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATCCAGACATCTGCT	41	False	NA	NA	False	NA	NA	NA	80454354	80518337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_22857.known	chr10	+	5476	8	FSM	ENSG00000108219.15	ENST00000372164.7	5476	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	90.8921765340782	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAAGTGAAAGTATGTC	16	True	NA	23	True	AATAAA	-25	NA	80454329	80522631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_22860.nnic	chr10	+	2499	8	NIC	ENSG00000108219.15	novel	16183	9	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	90.4681700705744	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTTTTGGTCATTTT	-3	True	NA	13	True	AATATA	-11	NA	80454256	80519628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_80454372_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_22865.known	chr10	+	808	6	FSM	ENSG00000108219.15	ENST00000481124.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	103.427269131501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTATGTGGGAGTGGT	5	True	NA	NA	False	NA	NA	NA	80454264	80518216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_22871.known	chr10	+	2382	9	FSM	ENSG00000165678.22	ENST00000372134.6	2382	9	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_1	111.354094558754	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTGAGGTGATTGCT	4	True	NA	NA	False	AATGAA	-17	NA	84139508	84153568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84139594_84141461_84141630_84142654_84142755_84143994_84144107_84144874_84145017_84148729_84148839_84150054_84150244_84150708_84150881_84152263
transcript_22876.known	chr10	+	6877	17	FSM	ENSG00000148600.15	ENST00000623527.4	6877	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGGAAACTGTAGCATCT	-6	True	NA	12	True	AATAAA	-27	NA	84194536	84218694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84194816_84195493_84195590_84196504_84196651_84197785_84197837_84199031_84199122_84200600_84200688_84201806_84201921_84202979_84203124_84204526_84204606_84205826_84205928_84208173_84208378_84208728_84208882_84211000_84211166_84211647_84211716_84212178_84212408_84213090_84213349_84214081
transcript_22880.known	chr10	+	1724	5	FSM	ENSG00000229404.6	ENST00000653603.1	1724	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	4.38748219369606	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTCTCTCTCATGGTA	NA	False	NA	NA	False	AATAAA	-21	NA	84279967	84290616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84280066_84288223_84288421_84288593_84288697_84288816_84289045_84289518
transcript_22881.known	chr10	+	7653	10	FSM	ENSG00000107771.17	ENST00000372088.8	7653	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	20.2977831301844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTTGTCTTTCTCAAC	-13	True	NA	13	True	AATAAA	-23	NA	84328588	84518517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932_84464017_84470371_84470459_84477574_84477665_84513448
transcript_22883.nic	chr10	+	2508	8	ISM	ENSG00000107771.17	ENST00000372088.8	7653	10	-47	48092	-44	6480	5prime_fragment	FALSE	canonical	3	77	junction_7	15.6544314649174	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAAAGATCCAACTATT	NA	False	NA	NA	False	AATAAA	-29	NA	84328541	84470425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932_84464017_84470371
transcript_22884.nic	chr10	+	2454	7	ISM	ENSG00000107771.17	ENST00000372088.8	7653	10	-47	54501	-44	71	5prime_fragment	FALSE	canonical	3	106	junction_4	9.12262145560267	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACTATGTAGTCATGC	NA	False	NA	NA	False	GATAAA	-10	NA	84328541	84464016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932
transcript_22885.known	chr10	+	2066	3	FSM	ENSG00000107771.17	ENST00000359979.8	2066	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTAAATATACTCAACA	-16	True	NA	NA	False	AATAAA	-22	NA	84328585	84374005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84328809_84371013_84372470_84373618
transcript_22888.known	chr10	-	6310	19	FSM	ENSG00000062650.20	ENST00000298767.10	6310	19	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_16	59.3378327465853	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTGTCTTTAACATAAG	-17	True	NA	NA	False	AATAAA	-19	NA	86521792	86435255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_86437609_86437919_86438016_86443274_86443364_86446241_86446450_86451966_86452132_86453219_86453336_86453655_86453832_86458988_86459066_86460398_86460497_86461175_86461288_86467278_86467507_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
transcript_22898.nic	chr10	-	2811	9	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-47	32079	-47	-282	5prime_fragment	FALSE	canonical	3	377	junction_6	48.7273986069439	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAAGGCTCTGTGAAACT	NA	False	NA	NA	False	ATTAAA	-8	NA	86521839	86467334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86467507_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
transcript_22899.nnic	chr10	-	2658	8	NIC	ENSG00000062650.20	novel	6310	19	NA	NA	-47	-282	combination_of_known_splicesites	FALSE	canonical	3	46	junction_3	147.456392723754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAAGGCTCTGTGAAACT	NA	False	NA	NA	False	ATTAAA	-8	NA	86521839	86467334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_86467507_86470991_86471104_86472207_86472345_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
transcript_22900.nic	chr10	-	2381	6	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-47	37365	-47	-5568	5prime_fragment	FALSE	canonical	3	377	junction_3	52.3281950768417	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGAAGTAAGCAGCCA	NA	False	NA	NA	False	NA	NA	NA	86521839	86472620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
transcript_22901.nic	chr10	-	2087	4	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-47	61999	-47	-30202	5prime_fragment	FALSE	canonical	3	377	junction_1	32.8870119584549	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGGAGATAAATCAAAGGA	NA	False	NA	-19	True	AATAAA	-1	NA	86521839	86497254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86497320_86499717_86500744_86517570_86518092_86521364
transcript_22903.nic	chr10	-	3350	3	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-47	63134	-47	-31337	5prime_fragment	FALSE	canonical	3	395	junction_2	29.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCAGTGTTGTCTTTG	NA	False	NA	NA	False	AAAAAG	-11	NA	86521839	86498389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86500744_86517570_86518092_86521364
transcript_22904.nic	chr10	-	1932	3	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-47	64552	-47	-32755	5prime_fragment	FALSE	canonical	3	395	junction_2	29.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAAAACAGCTCCATCA	NA	False	NA	NA	False	AAGAAA	-15	NA	86521839	86499807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86500744_86517570_86518092_86521364
transcript_22905.nic	chr10	-	1762	3	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-47	64722	-47	-32925	5prime_fragment	FALSE	canonical	3	395	junction_2	29.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTTAAACTTGAATTTT	NA	False	NA	NA	False	ACTAAA	-9	NA	86521839	86499977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86500744_86517570_86518092_86521364
transcript_2291.known	chr1	+	3632	4	FSM	ENSG00000116273.6	ENST00000377648.5	3632	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	6.53197264742181	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAATTGTGTTTCTTTTC	-16	True	NA	58	True	NA	NA	NA	6613730	6624030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6614106_6616756_6616859_6619802_6620338_6621410
transcript_22911.nic	chr10	+	3856	14	NIC	ENSG00000107779.14	novel	6417	13	NA	NA	-101	-2785	combination_of_known_junctions	TRUE	canonical	3	51	junction_3	128.692744493258	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGCCTTGTTATCTCAA	687	False	NA	2	True	AATAAA	-16	NA	86756499	86925184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_86756920_86838864_86838980_86843405_86843511_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593
transcript_22915.known	chr10	+	6417	13	FSM	ENSG00000107779.14	ENST00000372037.8	6417	13	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_7	37.6152857522341	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTGATGTGTTTTGTG	9	True	NA	8	True	AGTAAA	-19	NA	86756618	86927969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_86756920_86838864_86838980_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593
transcript_2292.known	chr1	-	4487	4	FSM	ENSG00000162413.17	ENST00000377658.8	4487	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	5.90668171555645	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCATTGCCTTTGT	-2	True	NA	-5	True	AATAAA	-16	NA	6602869	6590723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6593659_6595484_6595558_6599046_6599453_6601796
transcript_22920.nnic	chr10	+	3611	12	NIC	ENSG00000107779.14	novel	6417	13	NA	NA	-76	-2785	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	118.960997844943	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGCCTTGTTATCTCAA	712	False	NA	2	True	AATAAA	-16	NA	86756524	86925184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_86756920_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593
transcript_22927.nic	chr10	+	1060	2	ISM	ENSG00000107779.14	ENST00000372037.8	6417	13	-10	88356	8	-50504	5prime_fragment	FALSE	canonical	3	447	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTATATTGAAAAATGAAT	-1	True	NA	NA	False	NA	NA	NA	86756608	86839613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_86756920_86838864
transcript_2293.known	chr1	-	1056	4	FSM	ENSG00000162413.17	ENST00000467612.5	1056	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	26.2339898266013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCAGAGGCCGTCGGGA	NA	False	NA	NA	False	NA	NA	NA	6614560	6593192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6593659_6595484_6595558_6599046_6599453_6614449
transcript_22931.nnic	chr10	+	1058	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2464	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10.3846039885977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	370	False	NA	7	True	AATAAA	-17	NA	86956134	86963258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_86956426_86958587_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_22934.known	chr10	+	756	5	FSM	ENSG00000173267.14	ENST00000372017.4	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	7.79021822544144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	4	True	NA	7	True	AATAAA	-17	NA	86958598	86963258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_22939.known	chr10	-	3300	13	FSM	ENSG00000148672.10	ENST00000277865.5	3300	13	0	0	0	0	multi-exon	TRUE	canonical	3	620	junction_10	44.1122306043221	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGAGAAAGAGGCTCT	-24	True	NA	NA	False	ATTAAA	-15	NA	87094843	87050201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87060687_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
transcript_2294.known	chr1	-	6445	3	FSM	ENSG00000162413.17	ENST00000377663.3	6445	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCATTGCCTTTGT	692	False	NA	-5	True	AATAAA	-16	NA	6603001	6590723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6595558_6599046_6599453_6601796
transcript_22941.known	chr10	-	2623	11	FSM	ENSG00000148672.10	ENST00000684201.1	2623	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	210.06703691917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTAACCTGGTGATAAAA	43	True	NA	45	True	NA	NA	NA	87094776	87050535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
transcript_22942.known	chr10	+	3601	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	43.3564041149376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	7	True	NA	15	True	AATAAA	-17	NA	87095205	87191465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_22944.known	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	61.3066064955483	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	-3	True	NA	13	True	AATAAA	-15	NA	87095195	87191463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
transcript_22953.known	chr10	-	662	6	FSM	ENSG00000223482.9	ENST00000451940.6	662	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	105.039801980011	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGACTGACAAACTTCC	78	False	NA	NA	False	NA	NA	NA	87342542	87203874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87203937_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_22957.known	chr10	-	855	6	FSM	ENSG00000223482.9	ENST00000433530.7	916	6	61	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	102.455063320463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTCAAAAAGATTGTCCA	-1	True	NA	NA	False	ATTAAA	-40	NA	87342345	87238397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87238850_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_22958.known	chr10	-	876	6	FSM	ENSG00000223482.9	ENST00000433920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	104.39042101649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	8	False	NA	-4	True	AATAAA	-18	NA	87342612	87238666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87238873_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_22959.known	chr10	-	6174	6	FSM	ENSG00000223482.9	ENST00000663113.1	6174	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	90.4199093120536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAAGTTGTTGAGTGA	184	False	NA	NA	False	ACTAAA	-35	NA	87342436	87240175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_22964.known	chr10	-	532	5	FSM	ENSG00000223482.9	ENST00000666515.2	536	5	0	4	0	-1	multi-exon	FALSE	canonical	3	7	junction_1	111.244100967197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCTCTATTGTTTAA	-10	True	NA	-8	True	AATAAA	-14	NA	87342393	87238670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87238850_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_22965.known	chr10	-	1014	5	FSM	ENSG00000223482.9	ENST00000655272.2	1039	5	25	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.40348832156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	254	False	NA	NA	False	ATTAAA	-24	NA	87342366	87287958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87288496_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_22966.known	chr10	-	933	5	FSM	ENSG00000223482.9	ENST00000668676.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	124.054423540638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-3	True	NA	NA	False	ATTAAA	-24	NA	87342386	87287958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
transcript_22968.known	chr10	-	1446	5	FSM	ENSG00000223482.9	ENST00000417860.7	2036	5	0	590	0	-590	multi-exon	FALSE	canonical	3	24	junction_2	107.264567775198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCCACTTCATGTAACA	-8	True	NA	NA	False	AATAAA	-17	NA	87342391	87319255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87320200_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_22969.known	chr10	-	4023	4	FSM	ENSG00000223482.9	ENST00000654503.2	4041	4	18	0	1	0	multi-exon	FALSE	canonical	3	249	junction_2	14.1970262926979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCATTTCACAATT	-5	True	NA	NA	False	NA	NA	NA	87342388	87284766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87288496_87326629_87326673_87336785_87336890_87342241
transcript_22972.known	chr10	-	1295	4	FSM	ENSG00000223482.9	ENST00000660726.2	1835	4	16	524	0	-522	multi-exon	FALSE	canonical	3	47	junction_1	103.879203351243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGCTTTGCAACATC	6	True	NA	NA	False	AATGAA	-4	NA	87342377	87319187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87320200_87326629_87326673_87336785_87336890_87342241
transcript_22974.known	chr10	-	3270	3	FSM	ENSG00000223482.9	ENST00000662586.1	3270	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	135.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTATTTACGTATGA	66	False	NA	NA	False	AATAAA	-10	NA	87342554	87331961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87334815_87336785_87336890_87342241
transcript_22976.known	chr10	-	1586	3	FSM	ENSG00000223482.9	ENST00000656123.1	1586	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	139.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAATTATAGAGGCCAG	6	True	NA	NA	False	AGTAAA	-14	NA	87342377	87332964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87334311_87336785_87336890_87342241
transcript_22977.known	chr10	+	570	2	FSM	ENSG00000224914.4	ENST00000656958.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTCTGTCACACTCTAT	NA	False	NA	NA	False	NA	NA	NA	87342919	87344520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87343406_87344436
transcript_22978.known	chr10	+	651	1	FSM	ENSG00000224914.4	ENST00000664736.1	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCCATGTTCTAGAGCA	NA	False	NA	NA	False	AATAAA	-22	NA	87342906	87343557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87342900_87343600
transcript_22981.known	chr10	+	2470	5	FSM	ENSG00000107789.16	ENST00000371996.9	2470	5	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	31.0282129682004	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGACTCACCTGGCAAT	-4	True	NA	88	True	AATACA	-38	NA	87504892	87553461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87505553_87508335_87508534_87513123_87513222_87521035_87521170_87552081
transcript_22982.known	chr10	+	2183	3	FSM	ENSG00000107789.16	ENST00000371994.8	2183	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	175.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAGGACTTTTCTCTTC	0	True	NA	15	True	AATAAA	-20	NA	87504874	87553388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87505553_87508335_87508534_87552081
transcript_22983.known	chr10	+	3699	13	FSM	ENSG00000198682.13	ENST00000456849.2	3699	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	44.2593367425325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	15	True	NA	21	True	AATAAA	-15	NA	87659877	87747705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87721755_87721771_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_22987.known	chr10	+	3949	12	FSM	ENSG00000198682.13	ENST00000361175.8	3949	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	15.178279391593	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	NA	False	NA	21	True	AATAAA	-15	NA	87659612	87747705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_23.known	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00062_+_0_1000
transcript_23003.known	chr10	-	4640	10	FSM	ENSG00000138138.14	ENST00000308448.11	4640	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	74.9029001070349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	43	True	NA	NA	False	ATTAAA	-19	NA	87818160	87751511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87817794
transcript_23004.known	chr10	-	4334	10	FSM	ENSG00000138138.14	ENST00000680024.1	4334	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	44.5396203147016	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-23	True	NA	NA	False	ATTAAA	-19	NA	87818226	87751511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_23013.known	chr10	+	470	2	FSM	ENSG00000223820.5	ENST00000415212.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCAGCTTGTGCCTTT	68	False	NA	NA	False	NA	NA	NA	87818424	87819081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87818715_87818901
transcript_23021.known	chr10	+	8515	9	FSM	ENSG00000171862.12	ENST00000371953.8	8515	9	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	15.1156996199316	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTTTTAAACTTTTTAT	-8	True	NA	12	True	ATTAAA	-21	NA	87863624	87971930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87864549_87894024_87894110_87925512_87925558_87931045_87931090_87933012_87933252_87952117_87952260_87957852_87958020_87960893_87961119_87965286
transcript_23030.nnic	chr10	-	1326	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-129	-859	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	24.5307969703391	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTCTTCGGATGTGT	NA	False	NA	-4	True	AATAAA	-26	NA	88583461	88284960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362647_88523215_88523230_88582201_88582308_88583072
transcript_23031.nnic	chr10	-	1334	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-129	-859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5307969703391	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTCTTCGGATGTGT	NA	False	NA	-4	True	AATAAA	-26	NA	88583461	88284960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362655_88523215_88523230_88582201_88582308_88583072
transcript_23035.known	chr10	-	525	4	FSM	ENSG00000184719.12	ENST00000437752.2	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTGCTTTTGCCAT	128	False	NA	NA	False	NA	NA	NA	88583190	88572903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_88573062_88581566_88581710_88582201_88582308_88583072
transcript_23038.known	chr10	+	2021	11	FSM	ENSG00000138134.12	ENST00000371926.8	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	5.72712842531054	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTTGTATTTATAGAG	-11	True	NA	8	True	AATAAA	-16	NA	88880244	88923487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88923167
transcript_23040.known	chr10	+	3696	9	FSM	ENSG00000026103.23	ENST00000652046.1	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	4.66201404974288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGCTGTTGATTAT	-9	True	NA	6	True	ATTAAA	-15	NA	88990797	89017059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89011998_89012082_89013342_89013368_89014118
transcript_23042.nic	chr10	-	1741	9	Fusion	ENSG00000107796.13_ENSG00000286116.1	novel	1349	9	NA	NA	-34	0	multi-exon	FALSE	canonical	2	2	junction_6	3.19178633370093	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGCGTTGGCCTCCGA	-46	True	NA	0	True	AATAAA	-22	NA	88991373	88935073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr10_-_88935367_88938060_88938243_88939506_88939699_88941228_88941391_88941784_88941870_88943796_88943908_88947257_88947387_88948801_88948954_88990938
transcript_23044.known	chr10	+	1044	8	FSM	ENSG00000026103.23	ENST00000357339.6	1044	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.43462252521458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAAAAACAACAAATTCA	-29	True	NA	NA	False	AATGAA	-19	NA	88990777	89014450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89011998_89012082_89013342_89013368_89014118
transcript_23046.known	chr10	+	857	6	FSM	ENSG00000026103.23	ENST00000479522.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.3266645147405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAGATTTTTAATATCT	45	True	NA	NA	False	NA	NA	NA	88990851	89014584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88990907_89003028_89003195_89010538_89010601_89011998_89012082_89013342_89013368_89014118
transcript_2305.known	chr1	-	3201	16	FSM	ENSG00000007923.17	ENST00000377577.10	3201	16	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_5	89.3486554024302	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGGCGCTCTTCCGTG	-3	True	NA	-13	True	AATAAA	-16	NA	6701816	6634169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6639901_6640058_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_23050.known	chr10	-	2496	10	FSM	ENSG00000107798.18	ENST00000336233.10	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_9	20.4999247213312	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	1	True	NA	-8	True	AATAAA	-26	NA	89251775	89213571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251736
transcript_23052.known	chr10	+	4029	2	FSM	ENSG00000152778.10	ENST00000371795.5	4029	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATATTGTCCTGCACCT	-34	True	NA	NA	False	AATAAA	-17	NA	89414567	89420997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_89414804_89417204
transcript_23057.known	chr10	-	2703	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	78.4573486395988	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-7	True	NA	-34	True	AATAAA	-18	NA	89643887	89582987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
transcript_23058.known	chr10	-	3331	7	FSM	ENSG00000152782.18	ENST00000307534.10	3155	7	-176	0	-176	0	multi-exon	FALSE	canonical	3	178	junction_6	19.9951382979852	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	NA	False	NA	-34	True	AATAAA	-18	NA	89645418	89582987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89644599
transcript_23060.nnic	chr10	-	1580	2	NIC	ENSG00000152782.18	novel	572	4	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTCATGTTGGTGTTT	-15	True	NA	37	True	AATAAA	-13	NA	89645248	89625701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_89626633_89644599
transcript_23063.known	chr10	+	563	4	FSM	ENSG00000232936.6	ENST00000454174.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	1169	False	NA	6	True	ATTAAA	-16	NA	89645281	89650667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_89645458_89648922_89649022_89650058_89650232_89650552
transcript_23072.nic	chr10	+	2181	16	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-24	48443	-4	15406	5prime_fragment	FALSE	canonical	3	183	junction_15	33.0039728248316	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTTAAAAAAGAGAGA	-16	True	NA	43	True	ATTAAA	-43	NA	89701585	89726496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412
transcript_23074.nic	chr10	+	1937	14	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	-63	50911	-63	12933	5prime_fragment	FALSE	canonical	3	188	junction_13	30.1163424545584	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCTTGGAATTTAAAAT	NA	False	NA	NA	False	GATAAA	-17	NA	89701526	89724023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963
transcript_23076.nic	chr10	+	1877	13	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	-63	55228	-63	8616	5prime_fragment	TRUE	canonical	3	221	junction_11	24.5368204043547	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATTAAGAACTCATA	NA	False	NA	NA	False	AAAACA	-43	NA	89701526	89719706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418
transcript_23080.nic	chr10	+	704	6	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	8	63844	8	0	5prime_fragment	FALSE	canonical	3	229	junction_2	22.8997816583477	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	-4	True	NA	NA	False	NA	NA	NA	89701597	89711090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
transcript_23081.known	chr10	-	3467	4	FSM	ENSG00000148680.16	ENST00000336152.8	3467	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	31.0089592788206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-26	True	NA	-20	True	AATAAA	-24	NA	90858039	90740822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_90742529_90743592_90743691_90748838_90749595_90857132
transcript_23083.known	chr10	-	3033	3	FSM	ENSG00000148680.16	ENST00000371719.2	3033	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	24.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-9	True	NA	-20	True	AATAAA	-24	NA	90857698	90740822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_90742529_90748833_90749595_90857132
transcript_23084.known	chr10	-	3028	3	FSM	ENSG00000148680.16	ENST00000277874.10	3028	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	13.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-9	True	NA	-20	True	AATAAA	-24	NA	90857698	90740822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_90742529_90748838_90749595_90857132
transcript_23088.nic	chr10	+	1782	14	NIC	ENSG00000148688.14	novel	1004	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_13	252.395130252444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGTGATGTGTTGCTT	0	True	NA	5	True	NA	NA	NA	90871951	90906065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569_90900669_90902242_90902345_90903191_90903277_90905301
transcript_23093.known	chr10	+	2332	11	FSM	ENSG00000148688.14	ENST00000371703.8	2332	11	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	41.6648532938735	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGACCAGGTGAAATT	0	True	NA	12	True	AATAAA	-28	NA	90871973	90902191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569
transcript_23096.known	chr10	+	1466	10	FSM	ENSG00000148688.14	ENST00000487998.5	1466	10	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	43.8330164754074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTTTCATTTGGAG	-1	True	NA	12	True	AATAAA	-13	NA	90871972	90900762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90895484_90895879_90895918_90896312_90896393_90900569
transcript_23097.nic	chr10	+	1889	9	NIC	ENSG00000148688.14	novel	1466	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	621	junction_4	45.2320406349305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTCATTTGGAGCTAG	-2	True	NA	16	True	AATAAA	-17	NA	90871949	90900766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90895918_90896312_90896393_90900569
transcript_23098.known	chr10	-	1790	9	FSM	ENSG00000148677.7	ENST00000371697.4	1790	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAGTCCTTCTATAAG	0	True	NA	-15	True	AATAAA	-18	NA	90921087	90912095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_90912977_90915542_90915642_90915781_90915881_90916170_90916270_90917731_90917831_90918864_90918973_90919130_90919269_90920168_90920349_90921000
transcript_23099.known	chr10	+	973	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	10.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTGTATTTTTCCT	6	True	NA	NA	False	AATAAA	-35	NA	91220782	91227960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91220837_91222688_91222984_91227336
transcript_23100.known	chr10	+	2175	5	FSM	ENSG00000165338.17	ENST00000371681.8	2175	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.4298028946561	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTGTCTTATTCCCA	-30	True	NA	3	True	AATAAA	-15	NA	91410343	91463664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91410577_91425280_91425411_91460426_91460566_91461253_91461357_91462094
transcript_23101.known	chr10	-	2541	2	FSM	ENSG00000119938.9	ENST00000238994.6	2541	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTATATTTTCTTT	-5	True	NA	-4	True	AATAAA	-15	NA	91633071	91628441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_91630867_91632955
transcript_23102.known	chr10	+	6242	27	FSM	ENSG00000107854.6	ENST00000371627.5	6242	27	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_18	40.0300922310163	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTCAACATTTAGTC	-15	True	NA	115	True	ATTAAA	-17	NA	91798425	91865475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282_91841449_91842171_91842392_91844918_91845029_91845751_91845941_91848382_91848636_91849511_91849595_91851215_91851337_91855028_91855127_91855613_91855689_91857424_91857531_91859461_91859649_91861998_91862156_91862936
transcript_23105.nic	chr10	+	2195	16	ISM	ENSG00000107854.6	ENST00000371627.5	6242	27	-65	23278	-65	-23278	5prime_fragment	FALSE	canonical	3	322	junction_1	24.2422954542034	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGATGGAAATACTCCTT	-16	True	NA	NA	False	NA	NA	NA	91798360	91842197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282_91841449_91842171
transcript_23106.nic	chr10	+	2718	16	ISM	ENSG00000107854.6	ENST00000371627.5	6242	27	4	22686	4	-22686	5prime_fragment	FALSE	canonical	3	322	junction_1	24.2422954542034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATCAAGTATCTTCTA	-11	True	NA	NA	False	AATAAA	-16	NA	91798429	91842789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282_91841449_91842171
transcript_23107.nic	chr10	+	2136	15	ISM	ENSG00000107854.6	ENST00000371627.5	6242	27	-65	24060	-65	-24060	5prime_fragment	TRUE	canonical	3	322	junction_1	23.7131023801146	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATATGAAATTTGCAA	-16	True	NA	NA	False	NA	NA	NA	91798360	91841415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282
transcript_23113.known	chr10	-	2553	2	FSM	ENSG00000174721.10	ENST00000311575.6	2553	2	0	0	0	0	multi-exon	FALSE	canonical	3	1450	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTTGCAACC	5	True	NA	0	True	TATAAA	-19	NA	91909486	91906583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_91909048_91909397
transcript_23116.known	chr10	+	7249	38	FSM	ENSG00000095564.15	ENST00000265990.12	8361	38	0	1112	0	-1112	multi-exon	FALSE	canonical	3	93	junction_9	28.9370743716795	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCAACTGTGTGTTAT	-30	True	NA	119	True	AATAAA	-22	NA	91923769	92030325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91924091_91935656_91935781_91939951_91940067_91942421_91942569_91951402_91951567_91953736_91953874_91956527_91956658_91957224_91957294_91959064_91959155_91959784_91959881_91959977_91960155_91962537_91962679_91964076_91964202_91966636_91966758_91980453_91980559_91981642_91981793_91982082_91982226_91982586_91982762_91984200_91984405_91989153_91989581_91992118_91992310_91993693_91993848_91994534_91994645_91996368_91996571_91997602_91997752_92008122_92008276_92008828_92008951_92009040_92009209_92011072_92011151_92011285_92011416_92013666_92013809_92013898_92014030_92016339_92016466_92018782_92018936_92024755_92024968_92026591_92026752_92027129_92027301_92028789
transcript_23117.nic	chr10	+	3094	20	NIC	ENSG00000095564.15	novel	8361	38	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	24.5176176127943	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTAGTGCAAAACTATG	-20	True	NA	-80	True	ATTAAA	-12	NA	91923779	91989395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_91924091_91935656_91935781_91939951_91940067_91942421_91942569_91951402_91951567_91953736_91953874_91956527_91956658_91957224_91957294_91959064_91959283_91959784_91959881_91959977_91960155_91962537_91962679_91964076_91964202_91966636_91966758_91980453_91980559_91981642_91981793_91982082_91982226_91982586_91982762_91984200_91984405_91989153
transcript_23121.known	chr10	+	3922	6	FSM	ENSG00000198060.10	ENST00000358935.3	3922	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	21.2828569510768	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTGTACTTTGTTAAA	-16	True	NA	7	True	AATAAA	-15	NA	92291166	92353964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92291530_92311134_92311338_92340672_92340804_92349348_92349533_92349670_92349838_92351090
transcript_23125.known	chr10	-	5894	25	FSM	ENSG00000119912.18	ENST00000265986.11	5894	25	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_20	27.7318509219193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-28	True	NA	NA	False	NA	NA	NA	92574093	92451683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_23126.known	chr10	-	5877	25	FSM	ENSG00000119912.18	ENST00000650060.1	5877	25	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_11	79.6748601086524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-11	True	NA	NA	False	NA	NA	NA	92574076	92451683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92478644_92478790_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_23129.known	chr10	-	2103	14	FSM	ENSG00000119912.18	ENST00000677196.1	2103	14	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_9	26.7721041782333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	-31	True	NA	NA	False	NA	NA	NA	92574096	92482967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_23131.known	chr10	+	5010	22	FSM	ENSG00000138160.7	ENST00000677720.1	5010	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_15	74.6837626200834	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTTGCTCCATAATT	-14	True	NA	37	True	AATAAA	-45	NA	92593129	92655393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92593453_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175_92630365_92632485_92632694_92633622_92633796_92637183_92637310_92637390_92637546_92639793_92639901_92645362_92645643_92648211_92648435_92649834_92649987_92650400_92650518_92653664
transcript_23137.known	chr10	+	1724	4	FSM	ENSG00000152804.11	ENST00000282728.10	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	8.2192186706253	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTAATTCTTTGATT	1	True	NA	24	True	AATAAA	-28	NA	92689954	92695647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92690348_92692367_92692547_92692701_92692753_92694546
transcript_23140.known	chr10	+	3564	22	FSM	ENSG00000138190.17	ENST00000260762.10	3564	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	6.99983802857636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTATTTTGTCTAT	8	True	NA	14	True	ATTAAA	-24	NA	92848519	93059490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92919981_92920051_92928338_92928423_92934143_92934191_92934309_92934431_92935813_92935886_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_23141.known	chr10	+	3310	18	FSM	ENSG00000138190.17	ENST00000443748.6	3310	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.520240020131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTATTTTGTCTATTCA	-5	True	NA	17	True	ATTAAA	-27	NA	92848467	93059493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92928338_92928423_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_23151.known	chr10	+	2245	7	FSM	ENSG00000095596.12	ENST00000371531.5	2245	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2049.02697775202	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCAGAACTGTTCTCTG	1405	False	NA	22	True	AATAAA	-16	NA	93073474	93077884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93073835_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_23170.known	chr10	+	2117	7	FSM	ENSG00000095596.12	ENST00000224356.5	2117	7	0	0	0	0	multi-exon	FALSE	canonical	3	5186	junction_4	300.123169160041	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAACTGTTCTCTGA	1	True	NA	23	True	AATAAA	-17	NA	93073892	93077885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93074124_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_23171.known	chr10	+	1456	6	FSM	ENSG00000095596.12	ENST00000624589.3	1456	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2190.87398085787	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAATTTGAAGGTACTT	353	False	NA	22	True	ATTAAA	-29	NA	93074311	93077479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93074533_93074798_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_23172.known	chr10	-	6680	53	FSM	ENSG00000138119.17	ENST00000358334.9	6680	53	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_37	11.0551334831996	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTGTTTGTTGTA	390	False	NA	-3	True	AATAAA	-15	NA	93482194	93306429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_93307002_93310019_93310168_93310533_93310644_93313019_93313211_93316713_93316814_93319871_93320014_93323077_93323174_93323269_93323359_93325825_93325966_93328762_93328912_93329663_93329835_93333220_93333313_93333757_93333914_93335920_93336047_93337814_93337914_93340152_93340165_93343855_93343933_93347616_93347783_93349807_93349970_93351196_93351296_93351412_93351572_93351664_93351847_93353810_93353889_93355627_93355737_93356674_93356849_93359832_93359979_93361451_93361558_93363960_93364076_93366391_93366556_93369644_93369777_93372929_93373086_93374762_93374956_93377322_93377430_93379862_93379988_93381218_93381397_93387796_93387914_93389029_93389155_93396141_93396225_93397246_93397291_93397387_93397457_93399391_93399496_93401417_93401545_93402231_93402348_93402859_93402891_93404022_93404074_93404156_93404220_93408786_93408916_93409572_93409740_93426070_93426159_93431407_93431517_93452049_93452142_93456881_93456938_93482106
transcript_23179.nnic	chr10	+	2400	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	71.6200914548425	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	NA	False	NA	13	True	AATAAA	-18	NA	93496578	93529092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_93496782_93500039_93500086_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_2318.known	chr1	-	2210	15	FSM	ENSG00000007923.17	ENST00000294401.11	2210	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	204.244151616118	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTGGAAATTAGTCGT	NA	False	NA	NA	False	TATAAA	-24	NA	6701924	6635112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_23180.nnic	chr10	+	2549	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	52.5522061858491	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	NA	False	NA	13	True	AATAAA	-18	NA	93496578	93529092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_93496782_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_23181.nnic	chr10	+	2536	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	60.7530863413539	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	NA	False	NA	13	True	AATAAA	-18	NA	93496584	93529092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_93496924_93500039_93500086_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_23182.known	chr10	+	2658	9	FSM	ENSG00000138180.16	ENST00000371485.8	2658	9	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	32.0407455437604	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	-14	True	NA	13	True	AATAAA	-18	NA	93496611	93529092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93496924_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_23186.known	chr10	-	3109	14	FSM	ENSG00000148690.12	ENST00000359204.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_13	26.4324527089905	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTGTAGTGTGTAAAAA	-28	True	NA	NA	False	AATAAA	-19	NA	93702592	93667882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_23204.known	chr10	+	3036	3	FSM	ENSG00000176273.15	ENST00000483386.5	3036	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	11	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTCTATGTTTTTGGT	21	True	NA	NA	False	AATAAA	-20	NA	93893990	93909830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93894161_93906251_93906386_93907098
transcript_23208.known	chr10	-	3455	21	FSM	ENSG00000173145.11	ENST00000371361.3	3455	21	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_12	18.2087890865922	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGATATGATAATTT	10	True	NA	-2	True	AATAAA	-25	NA	94362939	94333225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344414_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_23211.nic	chr10	-	1486	11	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-47	13250	-27	0	5prime_fragment	FALSE	canonical	3	178	junction_2	21.2464114617034	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	1	True	NA	43	True	AATAAA	-10	NA	94362986	94346475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_23213.nic	chr10	-	778	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-47	21803	-27	6295	5prime_fragment	FALSE	canonical	3	193	junction_3	16.9776323437634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGGAGAAGAAGATGCA	1	True	NA	NA	False	AAGAAA	-1	NA	94362986	94355028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_23215.nic	chr10	-	557	4	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-47	24047	-27	4051	5prime_fragment	FALSE	canonical	3	193	junction_1	18.5532267334343	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGAACTCTGCAAACT	1	True	NA	NA	False	GATAAA	-11	NA	94362986	94357272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_94357332_94358082_94358216_94361664_94361873_94362829
transcript_23216.nic	chr10	+	1471	4	ISM	ENSG00000108239.9	ENST00000225235.5	5637	13	-104	42885	-104	-39850	5prime_fragment	FALSE	canonical	3	31	junction_1	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATTTAACTCCAAA	-14	True	NA	NA	False	NA	NA	NA	94402436	94493447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94403585_94441895_94442020_94474667_94474784_94493364
transcript_23220.nic	chr10	+	3121	22	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	76.2461403803661	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	329	False	NA	17	True	AATAAA	-17	NA	94545748	94602098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_23228.nic	chr10	+	513	6	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-41	11280	-39	5630	5prime_fragment	FALSE	canonical	3	215	junction_1	114.653216265397	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGAAGATGAATCA	329	False	NA	-40	True	AATAAA	-30	NA	94545748	94562826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811
transcript_23229.nic	chr10	+	498	5	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-41	11379	-39	5531	5prime_fragment	FALSE	canonical	3	215	junction_1	124.688612150429	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCCTTATTCTAGT	329	False	NA	18	True	NA	NA	NA	94545748	94562727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690
transcript_23232.nic	chr10	+	405	3	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-41	19857	-39	-2947	5prime_fragment	FALSE	canonical	3	215	junction_1	161.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATGTAACTGACTA	329	False	NA	27	True	NA	NA	NA	94545748	94554249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94545908_94546376_94546499_94554125
transcript_23233.known	chr10	+	3128	22	FSM	ENSG00000119969.15	ENST00000348459.10	3128	22	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	53.544056499247	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTAAATTATTTCTTC	-22	True	NA	18	True	AATAAA	-18	NA	94545787	94602099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_23234.known	chr10	+	400	4	FSM	ENSG00000119969.15	ENST00000630929.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	220.123197828448	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTGCAAATTGAGAG	6	True	NA	NA	False	NA	NA	NA	94545815	94557196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94557178
transcript_23237.known	chr10	-	1431	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_6	176.130081347723	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGTGTCTGTTATC	0	True	NA	-5	True	AATAAA	-16	NA	95291003	95237571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
transcript_23238.known	chr10	-	850	6	FSM	ENSG00000107438.9	ENST00000477757.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	560.944560540523	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAAATCTACTGTGAGA	-9	True	NA	NA	False	NA	NA	NA	95291012	95238009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95290819
transcript_23244.known	chr10	-	5927	25	FSM	ENSG00000095637.23	ENST00000371249.6	5927	25	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_20	22.0548558523212	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	6	True	NA	-1	True	AATAAA	-23	NA	95561378	95311772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95422189_95422217_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
transcript_23256.known	chr10	-	3337	18	FSM	ENSG00000059573.9	ENST00000371221.3	3337	18	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_12	184.727125042977	882	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGTGCGTGATTGA	-7	True	NA	-19	True	AATAAA	-11	NA	95656706	95605944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633496_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
transcript_23280.known	chr10	-	2552	14	FSM	ENSG00000119977.22	ENST00000614499.5	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	77.191454903112	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	NA	False	NA	-35	True	AATAAA	-14	NA	95693989	95663413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_23285.known	chr10	-	2414	13	FSM	ENSG00000119977.22	ENST00000680144.1	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	135.827300479526	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-5	True	NA	-22	True	AATAAA	-27	NA	95693919	95663400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_23288.known	chr10	-	2858	13	FSM	ENSG00000119977.22	ENST00000681739.1	2858	13	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_5	45.8021105772794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	-2	True	NA	-35	True	AATAAA	-14	NA	95693954	95663413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_23291.known	chr10	-	2235	12	FSM	ENSG00000119977.22	ENST00000680709.1	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	151.761938411491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGTGAGGAAAAATAAA	10	True	NA	27	True	NA	NA	NA	95693942	95663446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95692919_95693039_95693352_95693477_95693643
transcript_23296.known	chr10	-	557	3	FSM	ENSG00000119977.22	ENST00000478245.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTGGCCCACATTGG	13	True	NA	NA	False	NA	NA	NA	95693901	95692863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95693039_95693352_95693477_95693643
transcript_23297.known	chr10	+	1903	10	FSM	ENSG00000138185.20	ENST00000371207.8	1903	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.94811092476036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCTTTCATAATCTTT	NA	False	NA	-40	True	TTTAAA	-5	NA	95755651	95866654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_95755767_95823236_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356_95845597_95847445_95847707_95860468_95860583_95864723_95864862_95866176
transcript_23298.known	chr10	+	12493	10	FSM	ENSG00000138185.20	ENST00000371205.5	12493	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.54163943344649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGGGACAATTCTAG	2	True	NA	NA	False	AATAAA	-17	NA	95756162	95877266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_95756256_95823236_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356_95845597_95847445_95847707_95860468_95860583_95864723_95864862_95866176
transcript_23304.known	chr10	-	2457	5	FSM	ENSG00000226688.8	ENST00000414006.2	2457	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	31.8227512952604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTGTTTCCAGTCTC	30	True	NA	-22	True	ATTAAA	-1	NA	95907842	95873760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95875667_95876517_95876661_95897557_95897680_95904829_95904936_95907662
transcript_23306.known	chr10	-	2366	4	FSM	ENSG00000226688.8	ENST00000449419.6	2366	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	32.2593655651606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGTCCAATTAAACCC	-18	True	NA	-39	True	NA	NA	NA	95907890	95873777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95875667_95876517_95876661_95904829_95904936_95907662
transcript_23310.known	chr10	-	3965	3	FSM	ENSG00000226688.8	ENST00000657446.1	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAAAATCCCTGGGTAA	-31	True	NA	-58	True	ATTAAA	-18	NA	95907903	95873045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95876661_95904829_95904939_95907662
transcript_23311.known	chr10	-	3878	3	FSM	ENSG00000226688.8	ENST00000669099.1	3878	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTAAATTTTGAGATGC	-31	True	NA	-30	True	ATTAAA	-40	NA	95907903	95873017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95876661_95904829_95904939_95907777
transcript_23313.known	chr10	-	389	2	FSM	ENSG00000226688.8	ENST00000427300.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAAACAAAAAGAA	-11	True	NA	NA	False	NA	NA	NA	95907883	95904655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95904939_95907777
transcript_23315.known	chr10	+	3959	6	FSM	ENSG00000107443.16	ENST00000465148.3	3959	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	24.2074368738204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	25	True	NA	NA	False	AATAAA	-18	NA	96043582	96060870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057087_96057248_96057829
transcript_23318.known	chr10	+	2830	6	FSM	ENSG00000107443.16	ENST00000403870.7	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	77.293207981038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAGAAAGATTTGG	345	False	NA	NA	False	GATAAA	-24	NA	96043393	96059588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057123_96057248_96057829
transcript_23337.nic	chr10	-	1994	13	ISM	ENSG00000095587.9	ENST00000357947.4	6769	21	-33	30585	-33	0	5prime_fragment	FALSE	canonical	1	2	junction_2	5.42371336509099	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGGTATGAATTAGCAG	7767	False	NA	-8	True	AATAAA	-23	NA	96513959	96395192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_96395383_96395874_96396021_96397185_96397303_96405231_96405335_96410358_96410475_96413191_96413317_96420955_96421062_96422548_96422728_96428630_96428749_96432806_96432963_96446090_96446169_96480348_96480460_96513510
transcript_23343.nic	chr10	-	1402	5	ISM	ENSG00000095587.9	ENST00000357947.4	6769	21	-33	63533	-33	-32948	5prime_fragment	FALSE	canonical	3	10	junction_1	4.02336923485777	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTACTGAAAAGCTTC	7767	False	NA	-11	True	AATAAA	-14	NA	96513959	96428140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_96428749_96432806_96432963_96446090_96446169_96480348_96480460_96513510
transcript_23346.known	chr10	-	6100	15	FSM	ENSG00000077147.16	ENST00000371142.9	6100	15	0	0	0	0	multi-exon	FALSE	canonical	3	1521	junction_11	183.213157891266	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGATTCCTTATT	-12	True	NA	-4	True	AATAAA	-13	NA	96587012	96518109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96561977_96562139_96565303_96565427_96576633_96576830_96586733
transcript_23355.known	chr10	-	4800	17	FSM	ENSG00000155629.15	ENST00000339364.10	4800	17	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_5	4.13634802694357	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTCTCGTGAATG	-1	True	NA	-1	True	TATAAA	-37	NA	96720514	96593314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_96595635_96602279_96602399_96603978_96604050_96609711_96609868_96616638_96616712_96620351_96620558_96623471_96623538_96626707_96626906_96628397_96628494_96645472_96645663_96648658_96648856_96651247_96651381_96651508_96651652_96652697_96652843_96656797_96656935_96709566_96709984_96720381
transcript_23358.known	chr10	+	612	1	FSM	ENSG00000236552.2	ENST00000439189.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3458	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	15	False	NA	NA	False	AATACA	-36	NA	96750287	96750899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96750300_96750900
transcript_23359.known	chr10	+	10342	8	FSM	ENSG00000196233.14	ENST00000371103.8	10342	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	15.0969655012833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCTTGGTTTCTACT	3	True	NA	23	True	AATAAA	-21	NA	96832281	96964441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_23362.known	chr10	+	16001	8	FSM	ENSG00000196233.14	ENST00000421806.4	16001	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	12.4752816826405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTGTGTAGTCACTG	19	True	NA	17	True	ATTAAA	-17	NA	96832297	96995956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96980792
transcript_23364.known	chr10	+	4834	8	FSM	ENSG00000196233.14	ENST00000356016.7	4834	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.8307073174902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAACTTAAAAA	12	True	NA	NA	False	NA	NA	NA	96832954	96958891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96833115_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_23365.known	chr10	+	4717	7	FSM	ENSG00000196233.14	ENST00000676123.1	4717	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	16.532795690183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAGAAAAACTTAAA	2	True	NA	NA	False	NA	NA	NA	96832280	96958889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96832400_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_2337.known	chr1	+	1366	6	FSM	ENSG00000041988.16	ENST00000054650.9	1361	6	-2	-3	-2	3	multi-exon	FALSE	canonical	0	0	junction_1	39.6706440582958	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTCCCATCATCATTT	-2	True	NA	17	True	AATAAA	-17	NA	6624865	6633565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6624955_6625149_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632795
transcript_23373.known	chr10	-	7964	37	FSM	ENSG00000187122.17	ENST00000266058.9	7964	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.85719797124973	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTGGTCTCTTTTTCTC	-5	True	NA	-1	True	NA	NA	NA	97185959	96998037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97001351_97002157_97002370_97002703_97002993_97004067_97004223_97004692_97004824_97006482_97006721_97010992_97011131_97013740_97013835_97014018_97014159_97018585_97018684_97018982_97019108_97021249_97021414_97030756_97030829_97031605_97031678_97034470_97034543_97037697_97037767_97039987_97040121_97042900_97043068_97043369_97043514_97046653_97046798_97046990_97047066_97047689_97047835_97047972_97047997_97048954_97049119_97056320_97056465_97057209_97057282_97059459_97059532_97060086_97060159_97060639_97060788_97063454_97063619_97064167_97064240_97064804_97064877_97066014_97066087_97157817_97157890_97163379_97163452_97164818_97164891_97185477
transcript_23374.nnic	chr10	-	992	5	NIC	ENSG00000269891.2	novel	1876	15	NA	NA	-30644	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	2.27760839478607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTTCGTTGCTGTATT	-4	True	NA	NA	False	AATAAA	-12	NA	97186077	97153045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_97153222_97157817_97157890_97163379_97163452_97164818_97164891_97185477
transcript_23375.known	chr10	-	1876	15	FSM	ENSG00000269891.2	ENST00000479633.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.093342208508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTTCGTTGCTGTATT	3	True	NA	NA	False	AATAAA	-12	NA	97292637	97153045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97153222_97157817_97157890_97163379_97163452_97164818_97164891_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_23376.known	chr10	-	5438	12	FSM	ENSG00000213390.11	ENST00000358531.9	5438	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_2	36.1244405716071	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGATTTGACTGGTC	3	True	NA	-8	True	ATTAAA	-17	NA	97292637	97222178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_23378.known	chr10	-	5390	11	FSM	ENSG00000213390.11	ENST00000358308.7	5390	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	99.9692452707331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATTTGACTGGTCTAT	NA	False	NA	-5	True	ATTAAA	-20	NA	97292673	97222175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_23384.known	chr10	+	805	2	FSM	ENSG00000225850.4	ENST00000445808.4	806	2	0	1	0	-1	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGACCCAGTAATTCC	NA	False	NA	NA	False	ATTAAA	-23	NA	97334563	97343203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97334972_97342806
transcript_23385.known	chr10	-	2233	1	FSM	ENSG00000181274.7	ENST00000371019.4	2233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGTTTGGCATTTTGGT	-7	True	NA	-2	True	AATAAA	-19	NA	97334729	97332496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97332500_97334700
transcript_23386.known	chr10	-	4476	35	FSM	ENSG00000052749.14	ENST00000536831.5	4476	35	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_34	57.29243414606	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	NA	False	NA	-12	True	AATAAA	-17	NA	97426074	97356700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092_97401369_97426022
transcript_23388.known	chr10	-	4396	34	FSM	ENSG00000052749.14	ENST00000370992.9	4396	34	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_23	32.88609051704	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-27	True	NA	-12	True	AATAAA	-17	NA	97401340	97356700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
transcript_23389.known	chr10	-	4038	31	FSM	ENSG00000052749.14	ENST00000315563.10	4038	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	60.7616106874508	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTCTAGAAACTGT	30	True	NA	-13	True	AATAAA	-16	NA	97401283	97356701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97396217_97396302_97400304_97400535_97401092
transcript_23391.known	chr10	+	1802	4	FSM	ENSG00000171314.9	ENST00000334828.6	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	6827	junction_3	261.128746449375	4722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTGATGTGGAAGAC	10	True	NA	1	True	AATAAA	-20	NA	97426190	97433444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97426447_97430378_97430654_97430954_97431136_97432354
transcript_23394.known	chr10	+	1187	4	FSM	ENSG00000171314.9	ENST00000467867.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	3197.02455417534	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCACTCCCTTCATAC	1241	False	NA	NA	False	NA	NA	NA	97427533	97432690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97427929_97430378_97430654_97430954_97431136_97432354
transcript_23396.known	chr10	-	642	9	FSM	ENSG00000171311.13	ENST00000471049.5	642	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	312.364545643388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCAGCTGGTGTGAG	29	False	NA	NA	False	NA	NA	NA	97445973	97436539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438662_97438704_97441170_97441260_97443236_97443312_97445452_97445607_97445731_97445848_97445954
transcript_23397.known	chr10	-	1145	8	FSM	ENSG00000171311.13	ENST00000370902.8	1145	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_7	72.2173589850495	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGTTGGGTTGAAGTC	-4	True	NA	NA	False	NA	NA	NA	97446006	97435908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_2340.known	chr1	-	613	5	FSM	ENSG00000007923.17	ENST00000485073.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	75.6319211708919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTATGAAAGGATGC	9	True	NA	90	True	NA	NA	NA	6701804	6653808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_23400.known	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	229.138058820441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	9	True	NA	-32	True	AATAAA	-12	NA	97445993	97436247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
transcript_23406.known	chr10	-	2113	2	FSM	ENSG00000171311.13	ENST00000489158.1	2113	2	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAATGATTATAGGCAA	-4	True	NA	NA	False	AGTAAA	-2	NA	97446006	97443786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97445848_97445954
transcript_23407.known	chr10	+	1977	12	FSM	ENSG00000171307.19	ENST00000393760.6	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	218.199582610141	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	10	True	NA	22	True	AATAAA	-22	NA	97446174	97457370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_23410.known	chr10	+	1798	11	FSM	ENSG00000171307.19	ENST00000370854.7	1798	11	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	149.219435731409	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	5	True	NA	18	True	AATAAA	-18	NA	97446169	97457366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_23411.nic	chr10	+	1790	11	NIC	ENSG00000171307.19	novel	1798	11	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_8	191.175939908766	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	NA	False	NA	18	True	AATAAA	-18	NA	97446123	97457366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455713_97455784_97455973_97456045_97456776
transcript_23413.nic	chr10	+	1939	11	NIC	ENSG00000171307.19	novel	1977	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	215.943719519693	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	-4	True	NA	18	True	AATAAA	-18	NA	97446160	97457366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_2342.known	chr1	-	745	4	FSM	ENSG00000007923.17	ENST00000465911.1	745	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	420.155526759635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTAATATCTTATTTAT	-6	True	NA	NA	False	AATAAA	-16	NA	6701819	6670460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6670911_6678393_6678468_6680907_6681038_6701728
transcript_23420.known	chr10	+	1718	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	116.972720255411	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	37	False	NA	18	True	AATAAA	-18	NA	97446201	97457366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_23421.nic	chr10	+	1742	10	NIC	ENSG00000171307.19	novel	1718	10	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_7	179.659211004517	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	NA	False	NA	18	True	AATAAA	-18	NA	97446123	97457366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455713_97455784_97455973_97456045_97456776
transcript_23424.known	chr10	+	1647	10	FSM	ENSG00000171307.19	ENST00000353979.7	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	199.856059313808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	-10	True	NA	18	True	AATAAA	-18	NA	97446203	97457366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97453617_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_23433.known	chr10	+	1280	8	FSM	ENSG00000171307.19	ENST00000370846.8	1280	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	171.629049441652	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACATCCCTTTACTCA	32	False	NA	NA	False	AAGAAA	-24	NA	97446196	97457085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
transcript_23449.nic	chr10	-	3616	32	NIC	ENSG00000155229.21	novel	3499	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_29	97.7174567452384	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-14	True	NA	-28	True	AATAAA	-16	NA	97498422	97458323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480240_97480358_97480941_97481043_97484102_97484152_97498272
transcript_23450.known	chr10	-	3532	32	FSM	ENSG00000155229.21	ENST00000370782.6	3532	32	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_31	81.8102039436574	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	52	False	NA	-28	True	AATAAA	-16	NA	97498758	97458323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272_97498393_97498695
transcript_23455.known	chr10	-	3499	31	FSM	ENSG00000155229.21	ENST00000438925.7	3499	31	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	51.6576766372197	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-14	True	NA	-28	True	AATAAA	-16	NA	97498422	97458323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_23462.known	chr10	-	3401	30	FSM	ENSG00000155229.21	ENST00000415383.5	3401	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	113.97147983776	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	20	True	NA	-28	True	AATAAA	-16	NA	97498388	97458323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466157_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477405_97477854_97477930_97478303_97478390_97480941_97481043_97498272
transcript_23466.known	chr10	-	3555	30	FSM	ENSG00000155229.21	ENST00000355839.10	3555	30	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_24	81.2786051356339	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	201	False	NA	-30	True	AATAAA	-14	NA	97498609	97458325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_23482.known	chr10	-	3165	29	FSM	ENSG00000155229.21	ENST00000327238.14	3165	29	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	86.5753402581608	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	24	True	NA	-30	True	AATAAA	-14	NA	97498384	97458325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_23498.known	chr10	+	1647	3	FSM	ENSG00000165886.5	ENST00000370664.4	1647	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	12	689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTGGCATTTGACTG	-14	True	NA	25	True	AATAAA	-18	NA	97498923	97571206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97499274_97567913_97568142_97570137
transcript_23500.known	chr10	+	4189	9	FSM	ENSG00000155252.13	ENST00000370631.3	4189	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_8	15.4272486205415	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTAGTGCCAAGGGCTT	12	False	NA	NA	False	AATAAA	-18	NA	97640685	97676434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97641178_97650940_97651142_97656284_97656417_97656820_97656975_97662906_97662969_97664884_97664985_97666437_97666572_97667060_97667121_97673580
transcript_23502.known	chr10	+	2442	7	FSM	ENSG00000241935.9	ENST00000370646.9	2442	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.10554159678513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTGGCTATATAAAGA	17	True	NA	NA	False	AATAAA	-16	NA	97584388	97612802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97584915_97598774_97598904_97599088_97599217_97599679_97599815_97600066_97600164_97601856_97601991_97611509
transcript_23503.known	chr10	-	2333	5	FSM	ENSG00000171160.18	ENST00000307450.11	2333	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	27.0034719989856	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-2	True	NA	-17	True	AATAAA	-19	NA	97633500	97614554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97616412_97616677_97616788_97617207_97617323_97619586_97619684_97633346
transcript_23505.nnic	chr10	-	2237	4	NIC	ENSG00000171160.18	novel	2333	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	77.8588466392869	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-3	True	NA	-17	True	AATAAA	-19	NA	97633501	97614554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_97616412_97616677_97616788_97617207_97617323_97633346
transcript_23507.known	chr10	+	1999	3	FSM	ENSG00000241935.9	ENST00000370647.8	1999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTGGCTATATAAAGA	16	False	NA	NA	False	AATAAA	-16	NA	97584342	97612802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97584915_97601856_97601991_97611509
transcript_23508.known	chr10	-	419	2	FSM	ENSG00000171160.18	ENST00000370635.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTAATTCAACCTCCA	7	True	NA	-19	True	AATAAA	-16	NA	97633491	97619409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97619684_97633346
transcript_23510.known	chr10	-	1375	3	FSM	ENSG00000119986.7	ENST00000370626.4	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	18	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGTGAGTCTGTCAC	-12	True	NA	-2	True	AATAAA	-15	NA	97687241	97677423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97678026_97679618_97679916_97686765
transcript_23519.known	chr10	+	3045	13	FSM	ENSG00000155256.18	ENST00000423811.3	3045	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	57.3504698227389	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-29	True	NA	14	True	AATAAA	-16	NA	97737127	97760895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97752856_97752878_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_23525.nic	chr10	+	3076	12	NIC	ENSG00000155256.18	novel	3045	13	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	31.6107524336497	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	69	False	NA	14	True	AATAAA	-16	NA	97737071	97760895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_23527.known	chr10	+	2997	12	FSM	ENSG00000155256.18	ENST00000359980.5	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	36.2799035963256	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-17	True	NA	14	True	AATAAA	-16	NA	97737139	97760895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_2353.known	chr1	+	431	5	FSM	ENSG00000171735.19	ENST00000461311.1	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_4	2050.1628441419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTTAAGACAGTTCT	12	False	NA	NA	False	NA	NA	NA	6785551	6887787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756_6871841_6887653
transcript_23536.known	chr10	+	2927	11	FSM	ENSG00000155256.18	ENST00000337540.11	2927	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.1722132858625	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	-36	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97738476_97738650_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_23540.nnic	chr10	+	2948	11	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	42.9348343422913	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	69	False	NA	14	True	AATAAA	-16	NA	97737071	97760895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_23544.nnic	chr10	+	2954	11	NIC	ENSG00000155256.18	novel	3045	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	42.3031913689736	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-34	True	NA	14	True	AATAAA	-16	NA	97737122	97760895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_23545.nnic	chr10	+	2939	11	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	36.9020324643508	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-34	True	NA	14	True	AATAAA	-16	NA	97737122	97760895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_23555.known	chr10	+	2765	10	FSM	ENSG00000155256.18	ENST00000357540.8	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	44.0983748755741	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	-36	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97738476_97738675_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_23556.known	chr10	+	2769	10	FSM	ENSG00000155256.18	ENST00000370610.7	2769	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.5657687532309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	-36	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_2356.known	chr1	+	567	4	FSM	ENSG00000171735.19	ENST00000473578.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	4416	junction_1	530.288181610297	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAATTTAAGTTT	10	True	NA	34	True	AATAAA	-19	NA	6785479	6872038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756
transcript_23563.known	chr10	+	2669	9	FSM	ENSG00000155256.18	ENST00000370613.7	2669	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	47.4379528963888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	-36	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97738476_97738675_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_2357.known	chr1	+	486	4	FSM	ENSG00000171735.19	ENST00000557126.5	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	2134.62882539851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATAGAATAAAGTGAC	21	True	NA	-29	True	ACTAAA	-2	NA	6785490	6887865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6887653
transcript_23570.known	chr10	+	512	2	FSM	ENSG00000155256.18	ENST00000462887.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCAGCCCAGGAGAGGC	26	True	NA	NA	False	NA	NA	NA	97737182	97738845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737326_97738476
transcript_23571.known	chr10	-	1883	3	FSM	ENSG00000120057.5	ENST00000266066.4	1883	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGGACCAGGTGGTT	0	True	NA	-5	True	ATTAAA	-17	NA	97771999	97766750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97767861_97769667_97769746_97771304
transcript_23572.known	chr10	-	2683	15	FSM	ENSG00000095713.14	ENST00000370597.8	2683	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.14366872638077	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTGTTTGTGGTTTT	-1	True	NA	NA	False	AATAAA	-37	NA	98030621	97864999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97865715_97880248_97880393_97882785_97882829_97884205_97884352_97895244_97895414_97895884_97895986_97896908_97896992_97901502_97901640_97904668_97904815_97908012_97908148_97917499_97917657_97923263_97923401_97936169_97936367_98011137_98011338_98030448
transcript_23576.known	chr10	+	3393	10	FSM	ENSG00000166024.14	ENST00000298999.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	37.8388395405802	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGGTGTTTGTTGGT	-13	True	NA	20	True	ATTAAA	-20	NA	98134656	98244897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_2358.known	chr1	+	863	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_3	2347.84454340572	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCACTTGCGTCG	-6	True	NA	9	True	AATAAA	-15	NA	6785463	6888201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
transcript_23587.known	chr10	-	2023	16	FSM	ENSG00000119943.13	ENST00000370575.5	2023	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	2.80158685192676	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGCTTGTATTTTTT	-11	True	NA	-2	True	ATTAAA	-19	NA	98415182	98383567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98383869_98384946_98385068_98387200_98387308_98388353_98388509_98390597_98390755_98391009_98391083_98392431_98392567_98392941_98393084_98395195_98395294_98395390_98395453_98397344_98397499_98400101_98400258_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_2359.known	chr1	+	546	4	FSM	ENSG00000171735.19	ENST00000467404.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2626.57850951893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATCTGTGTTTTCAT	11	False	NA	15	True	ATTAAA	-23	NA	6785517	6872019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6806982_6807089_6825091_6825211_6871756
transcript_23599.known	chr10	-	3703	20	FSM	ENSG00000107521.20	ENST00000361490.9	3703	20	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	85.5003847328986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCAGAGATGCTCACA	-13	True	NA	-4	True	AATAAA	-30	NA	98446935	98416197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445405_98446806
transcript_236.nnic	chr1	-	1933	11	NNC	ENSG00000227232.5	novel	1351	11	NA	NA	-219	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	103.305808161981	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	29789	14403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_14830_14969_15039_15795_15948_16606_16766_16857_17056_17232_17369_17605_17743_17914_18062_18267_18367_24737_24892_29533
transcript_2360.known	chr1	+	538	3	FSM	ENSG00000171735.19	ENST00000490738.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_1	2254.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATGAGTGCATTTCC	-16	True	NA	49	True	AATAAA	-34	NA	6785453	6872053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6825091_6825211_6871756
transcript_23618.known	chr10	-	2791	19	FSM	ENSG00000107521.20	ENST00000467246.5	2791	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	91.9602705412761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAGTGCTTCTAGACC	35	True	NA	-2	True	AATAAA	-30	NA	98446887	98417014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98430570_98430671_98431130_98431292_98433939_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_2362.known	chr1	+	2178	5	FSM	ENSG00000049245.13	ENST00000054666.11	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	18.4661853126194	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	-13	True	NA	11	True	AATAAA	-17	NA	7771295	7781432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7771386_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_2363.known	chr1	+	954	5	FSM	ENSG00000049245.13	ENST00000470357.1	954	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	67.8431094511447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCAAATTAGAAGGCCGG	1398	False	NA	32	True	NA	NA	NA	7772706	7779806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7773199_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_23632.nic	chr10	-	2837	19	NIC	ENSG00000107521.20	novel	2791	19	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_11	86.0316479235662	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAGTGCTTCTAGACC	NA	False	NA	-2	True	AATAAA	-30	NA	98446976	98417014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_23672.known	chr10	-	1580	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	108.331794860871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAATGGTTGAGGTGTG	9	True	NA	98	True	AATAAA	-16	NA	98446913	98429150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_2369.known	chr1	+	1088	7	FSM	ENSG00000116288.13	ENST00000493678.5	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	3430	junction_1	387.569527812609	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	1	True	NA	NA	False	ATTAAA	-15	NA	7961691	7985505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_23694.nic	chr10	-	1433	9	NIC	ENSG00000107521.20	novel	1580	10	NA	NA	-41	-106	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	103.943193620362	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAATAATCATCTAAT	NA	False	NA	-13	True	ATTAAA	-19	NA	98446976	98429261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_2370.known	chr1	+	1127	7	FSM	ENSG00000116288.13	ENST00000338639.10	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	1134.28544565388	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	20	True	NA	NA	False	ATTAAA	-15	NA	7961710	7985505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_23729.known	chr10	-	922	4	FSM	ENSG00000107521.20	ENST00000465957.1	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	119.618839095966	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAAGGAATATATC	-5	True	NA	-29	True	NA	NA	NA	98446927	98442387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98442958_98443123_98443241_98445299_98445414_98446806
transcript_2374.known	chr1	+	795	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	1699.45454778879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	10	True	NA	29	True	AATAAA	-19	NA	7961700	7985281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
transcript_23749.known	chr10	+	5702	11	FSM	ENSG00000119946.11	ENST00000356713.5	5702	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	2.80891438103763	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGTTTTCCTTGCCC	-12	True	NA	19	True	AATAAA	-44	NA	99329355	99394330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_99330961_99357511_99357656_99360834_99360976_99362226_99362397_99364416_99364517_99364954_99365003_99377054_99377219_99387819_99388004_99388151_99388302_99390305_99390408_99391436
transcript_23752.nic	chr10	+	3999	6	ISM	ENSG00000119946.11	ENST00000356713.5	5702	11	-299	27836	-299	-10834	5prime_fragment	FALSE	canonical	3	10	junction_5	1.16619037896906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGGCCGGGCATGGT	NA	False	NA	NA	False	AAAAAG	-4	NA	99329056	99366494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_99330961_99357511_99357656_99360834_99360976_99362226_99362397_99364416_99364517_99364954
transcript_23754.known	chr10	-	1978	9	FSM	ENSG00000120053.12	ENST00000370508.7	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	24.3515913237718	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTGATTTTATGAC	20	True	NA	-11	True	AATAAA	-20	NA	99430624	99396869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99397687_99402579_99402723_99403468_99403635_99403723_99403875_99405755_99405861_99406136_99406250_99406725_99406850_99420623_99420806_99430447
transcript_23763.known	chr10	+	8548	13	FSM	ENSG00000198018.7	ENST00000370489.5	8548	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.51280789419331	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATGAGTTGCTACT	15	True	NA	25	True	AATAAA	-33	NA	99659508	99711241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_99659589_99659861_99659965_99661445_99661629_99679260_99679467_99679724_99679876_99685791_99685896_99688693_99688751_99691384_99691519_99695955_99696123_99698533_99698859_99700972_99701059_99702511_99702674_99704451
transcript_23767.nnic	chr10	+	1308	9	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.460665834896	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	99732204	99756134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_23768.known	chr10	+	1332	9	FSM	ENSG00000119929.13	ENST00000370476.10	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	47.2253573305698	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	-32	True	NA	NA	False	AATAAA	-17	NA	99732233	99756134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_23771.known	chr10	-	5030	9	FSM	ENSG00000014919.13	ENST00000016171.6	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	27.1247119800377	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-20	True	NA	NA	False	ATTAAA	-18	NA	99732127	99710867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99714719_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_23772.known	chr10	-	2788	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	65.9014415623816	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTATTTCCTTATAG	7	True	NA	0	True	AATAAA	-20	NA	99732100	99711843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_23792.known	chr10	-	6428	17	FSM	ENSG00000107554.17	ENST00000324109.9	6428	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_16	43.7785621052131	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	-38	True	NA	-5	True	AATAAA	-16	NA	100009947	99875576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99955213_99957206_99969114_99969238_99971979_99972135_100009837
transcript_23799.known	chr10	-	4178	14	FSM	ENSG00000107554.17	ENST00000543621.6	4178	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	29.9650684204756	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	NA	False	NA	-5	True	AATAAA	-16	NA	99914082	99875576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99913952
transcript_2380.known	chr1	+	949	5	FSM	ENSG00000116288.13	ENST00000465354.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	1283.05424183859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCATTTTAAGATCCAT	10	False	NA	NA	False	NA	NA	NA	7961747	7971521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893
transcript_23812.known	chr10	-	5437	14	FSM	ENSG00000107554.17	ENST00000636706.1	5437	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	47.0767973854531	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	450	False	NA	-5	True	AATAAA	-16	NA	99930996	99875576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99929607
transcript_23813.known	chr10	-	1855	9	FSM	ENSG00000120054.12	ENST00000370418.8	1855	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	0.7806247497998	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTTTGGGAGGCCGAG	-16	True	NA	NA	False	NA	NA	NA	100081869	100042192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065187_100065371_100069713_100069870_100075910_100076108_100081402
transcript_23818.nic	chr10	-	3235	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	84.1162124092772	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGTTTTTTTTTC	13	False	NA	-4	True	AATAAA	-16	NA	100186043	100150093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_23819.known	chr10	-	1453	12	FSM	ENSG00000107566.14	ENST00000407654.7	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_11	74.0261289585984	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGATCTGTTGAATAAT	-7	True	NA	NA	False	AATATA	-22	NA	100186033	100151807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
transcript_2382.nnic	chr1	-	2699	5	NNC	ENSG00000116285.13	novel	3097	4	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	202.102078168434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTAGTAATGTTTCTT	-3	True	NA	-8	True	AATAAA	-21	NA	8026312	8011726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_8012958_8013358_8014397_8015307_8015385_8015494_8015693_8026157
transcript_23820.nic	chr10	-	2891	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	-10	-344	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	84.1162124092772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTGCAGATGATTGT	13	False	NA	NA	False	AATAAA	-17	NA	100186043	100150437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_2383.known	chr1	-	787	4	FSM	ENSG00000116285.13	ENST00000487559.1	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	205.20612942979	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTCTGATTTCAAATAT	13	False	NA	NA	False	NA	NA	NA	8026296	8014039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8014397_8015307_8015401_8015494_8015693_8026157
transcript_23831.known	chr10	-	3600	21	FSM	ENSG00000213341.11	ENST00000370397.8	3600	21	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	18.8663722002933	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGGTTCCATGAAGTG	-12	True	NA	66	True	AATAAA	-25	NA	100229596	100188299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100189628_100190868_100190969_100193297_100193432_100193983_100194132_100194424_100194522_100199970_100200021_100200670_100200781_100202087_100202150_100204505_100204658_100205075_100205200_100207229_100207333_100209594_100209790_100217994_100218131_100218717_100218826_100219007_100219133_100219269_100219360_100220587_100220677_100222111_100222182_100222865_100222981_100225922_100226018_100229427
transcript_23836.nic	chr10	-	2027	15	NIC	ENSG00000095485.18	novel	2591	14	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	46.3903139080756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAGTGTCTTGTGTTCA	NA	False	NA	-6	True	AATGAA	-22	NA	100267697	100232298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100232488_100233109_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_23843.nnic	chr10	-	3185	14	NNC	ENSG00000095485.18	novel	2591	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	30	junction_13	40.7763419052224	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	11	True	NA	-5	True	AATGAA	-23	NA	100267663	100232297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267001
transcript_23844.nnic	chr10	-	2678	14	NNC	ENSG00000095485.18	novel	2591	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	14	junction_13	44.3849486722589	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-2	True	NA	-5	True	AATGAA	-23	NA	100267676	100232297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267521
transcript_23845.known	chr10	-	2591	14	FSM	ENSG00000095485.18	ENST00000354105.10	2591	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	24.8360303262591	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-2	True	NA	-5	True	AATGAA	-23	NA	100267638	100232297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_23864.nic	chr10	-	2135	10	NIC	ENSG00000095485.18	novel	2402	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	8	junction_9	54.3527572642108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	11	True	NA	-5	True	AATGAA	-23	NA	100267663	100232297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100267570
transcript_23870.known	chr10	-	2634	5	FSM	ENSG00000196072.12	ENST00000614731.4	2634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	255.035291675486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATCTTGTCTTTAT	9048	False	NA	NA	False	ATTAAA	-30	NA	100286378	100273279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286300
transcript_23871.known	chr10	-	2619	5	FSM	ENSG00000196072.12	ENST00000370372.7	2619	5	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_1	15.0062486984589	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTCACCTTAATATTT	4	True	NA	NA	False	ATTAAA	-17	NA	100286680	100273292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286604
transcript_2388.known	chr1	+	2496	9	FSM	ENSG00000162426.16	ENST00000471889.7	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	7.04893608993584	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	10	True	NA	7	True	AATAAA	-17	NA	8318113	8344165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_8318187_8324305_8324727_8325297_8325391_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_23882.known	chr10	+	5245	6	FSM	ENSG00000099194.6	ENST00000370355.3	5245	6	0	0	0	0	multi-exon	FALSE	canonical	3	3705	junction_3	228.074899978055	514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGGTCTGGGAGTT	-9	True	NA	24	True	AATAAA	-17	NA	100347232	100364826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100347532_100348063_100348347_100352365_100352497_100354426_100354633_100356531_100356765_100360733
transcript_23894.known	chr10	+	1752	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	19.3448241713959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	34	False	NA	17	True	TTTAAA	-14	NA	100373565	100383372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
transcript_23895.known	chr10	+	1133	4	FSM	ENSG00000235823.4	ENST00000661158.1	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	5.24933858267454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	35	False	NA	22	True	AATAAA	-22	NA	100373566	100388360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388033
transcript_23897.known	chr10	+	1002	3	FSM	ENSG00000235823.4	ENST00000662018.1	1002	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	86.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	36	False	NA	22	True	AATAAA	-22	NA	100373567	100388360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100381215_100381453_100388040
transcript_23899.known	chr10	+	2499	2	FSM	ENSG00000235823.4	ENST00000664225.1	2499	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTAATTCTAATCACAAA	18	False	NA	58	True	NA	NA	NA	100373711	100383413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100381215
transcript_2390.nnic	chr1	+	2423	8	NIC	ENSG00000162426.16	novel	2496	9	NA	NA	-20	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_2	8.72481799120141	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	-10	True	NA	7	True	AATAAA	-17	NA	8318093	8344165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_8318187_8324305_8324727_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_23908.known	chr10	+	12927	8	FSM	ENSG00000166135.14	ENST00000299163.7	12927	8	0	0	0	0	multi-exon	TRUE	canonical	3	463	junction_3	52.9065406241641	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTCTCTTTGGAAAAT	1	True	NA	14	True	ATTAAA	-23	NA	100535942	100559998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100536136_100536410_100536662_100540633_100540783_100544950_100545097_100545942_100546050_100546517_100546582_100547139_100547251_100548092
transcript_2391.nnic	chr1	+	1985	7	NIC	ENSG00000162426.16	novel	2496	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	7.56453714527348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	7	True	NA	7	True	AATAAA	-17	NA	8318110	8344165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_8318187_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_23918.known	chr10	-	678	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	2763	junction_1	340.019117109612	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-1	True	NA	-21	True	AATAAA	-17	NA	100529871	100523739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
transcript_23919.known	chr10	-	713	5	FSM	ENSG00000166136.16	ENST00000370322.5	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	1298.61965178415	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTCATTTCCC	NA	False	NA	-24	True	AATAAA	-14	NA	100530000	100523742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529857
transcript_23923.known	chr10	-	829	4	FSM	ENSG00000166136.16	ENST00000466088.5	829	4	0	0	0	0	multi-exon	FALSE	canonical	3	3143	junction_1	264.670864786184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCTTTGTTGGACTTGT	8	True	NA	NA	False	NA	NA	NA	100529862	100526048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100526555_100526974_100527075_100529379_100529507_100529766
transcript_23928.known	chr10	-	585	3	FSM	ENSG00000166136.16	ENST00000531418.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	1441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGAACCTAGACAGAGG	-9	True	NA	NA	False	NA	NA	NA	100529879	100526743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100527075_100529365_100529507_100529766
transcript_23930.known	chr10	-	390	2	FSM	ENSG00000166136.16	ENST00000464651.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	2763	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	3272	False	NA	-21	True	AATAAA	-17	NA	100526598	100523739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100523930_100526398
transcript_23931.known	chr10	+	6892	20	FSM	ENSG00000119906.13	ENST00000238961.9	6892	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_16	10.5455088181029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTTGGTAATATTTG	-4	True	NA	9	True	ATTAAA	-22	NA	100912962	100965134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383_100918442_100923974_100924973_100925948_100926020_100929316_100929440_100929829_100929998_100930975_100931079_100937401_100937478_100938594_100938737_100944025_100944129_100945329_100945507_100947038_100947137_100947759_100947848_100950075_100950208_100950675_100950754_100956450_100956538_100959427_100959497_100961876
transcript_23933.nic	chr10	+	994	3	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	0	9529	0	3345	5prime_fragment	FALSE	canonical	3	80	junction_1	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAACCAAGGCAGGAACA	-4	True	NA	NA	False	AAGAAA	-2	NA	100912962	100917231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_100913251_100915998_100916043_100916569
transcript_23934.nic	chr10	+	1047	3	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	0	9476	0	3398	5prime_fragment	FALSE	canonical	3	80	junction_1	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTCAAATGTGGTAT	-4	True	NA	NA	False	NA	NA	NA	100912962	100917284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_100913251_100915998_100916043_100916569
transcript_23935.known	chr10	+	891	1	FSM	ENSG00000119906.13	ENST00000609386.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACTTGGTACTGTCTTTT	29	False	NA	NA	False	AATAAA	-19	NA	100912995	100913886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100913000_100913900
transcript_23945.known	chr10	-	884	6	FSM	ENSG00000055950.17	ENST00000370242.8	884	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	229.400435919377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGTGTCTCATACAGTG	-15	True	NA	NA	False	NA	NA	NA	100987497	100979197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100979373_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_23949.known	chr10	-	894	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	217.448476655966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCCAGGCTCTGTG	-33	True	NA	-9	True	AGTAAA	-17	NA	100987515	100981376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_23950.known	chr10	-	727	6	FSM	ENSG00000055950.17	ENST00000448244.5	727	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	223.161466207766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	49	False	NA	-8	True	AGTAAA	-18	NA	100987433	100981375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100981544_100983754_100983818_100984033_100984075_100986748_100986976_100987089_100987197_100987312
transcript_23951.known	chr10	+	3616	5	FSM	ENSG00000107815.10	ENST00000311916.8	3616	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	14.972892172189	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCTTTTTCT	-10	True	NA	14	True	ACTAAA	-17	NA	100987542	100994403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_23952.known	chr10	+	3665	5	FSM	ENSG00000107815.10	ENST00000370228.2	3665	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	37.5566239164278	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	-17	True	NA	12	True	ACTAAA	-15	NA	100987535	100994401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991055_100993189
transcript_23953.known	chr10	+	946	5	FSM	ENSG00000107815.10	ENST00000473656.5	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	43.1074239545812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCCTGTGGTCCTGA	-3	True	NA	NA	False	CATAAA	-15	NA	100987549	100993580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100987614_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_23958.known	chr10	-	2134	5	FSM	ENSG00000055950.17	ENST00000318325.6	2134	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	229.521649305681	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTCTGAGTCTCTTCT	-15	True	NA	-6	True	AATAAA	-16	NA	100987497	100977820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100979373_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_23959.known	chr10	-	824	5	FSM	ENSG00000055950.17	ENST00000370241.7	824	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	230.361129533609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGGTGGGGTGGTCAGC	26	True	NA	NA	False	NA	NA	NA	100987456	100978728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100979012_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_23960.known	chr10	-	747	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	209.58590124338	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-12	True	NA	-8	True	AGTAAA	-18	NA	100987494	100981375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_23963.known	chr10	-	866	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	222.366564233225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-1	True	NA	-36	True	AATAAA	-17	NA	100987483	100986273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
transcript_23964.known	chr10	-	798	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	225.658050057062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTTCAGGTCTGTCT	-1	True	NA	-42	True	AATAAA	-11	NA	100987483	100986279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
transcript_23965.known	chr10	-	1010	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-18	7	0	0	multi-exon	FALSE	canonical	3	470	junction_1	19.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-33	True	NA	-38	True	AATAAA	-15	NA	100987515	100986275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986976_100987089_100987197_100987312
transcript_23966.known	chr10	-	903	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-33	True	NA	-38	True	AATAAA	-15	NA	100987515	100986275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986976_100987312
transcript_23967.known	chr10	-	810	2	FSM	ENSG00000055950.17	ENST00000487059.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCTTTCCAGTGCCT	-31	True	NA	NA	False	AATGAA	-7	NA	100987513	100986587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100987197_100987312
transcript_23968.known	chr10	-	897	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	196	False	NA	-38	True	AATAAA	-15	NA	100987286	100986275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986976_100987089
transcript_23969.known	chr10	-	4112	17	FSM	ENSG00000186862.20	ENST00000619208.6	4112	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.86956007081225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGTCTGACTTCAG	-6	True	NA	NA	False	AATAAA	-19	NA	101031129	101007678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101008851_101009249_101009351_101010271_101010884_101011689_101011762_101011924_101012017_101012166_101012259_101015635_101015812_101016376_101016428_101018098_101018297_101018821_101019218_101020617_101020679_101021797_101021946_101022208_101022386_101023435_101023611_101023927_101024069_101029993_101030385_101031072
transcript_23971.known	chr10	+	3089	12	FSM	ENSG00000107819.14	ENST00000393459.5	3098	12	5	4	5	0	multi-exon	TRUE	canonical	0	0	junction_4	4.27176004526208	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGTCTTCACTTGA	-31	True	NA	3	True	AATAAA	-15	NA	101031238	101041240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101031535_101032313_101032483_101034691_101034856_101035496_101035668_101036002_101036102_101036485_101036562_101036722_101036809_101037075_101037204_101037381_101037432_101038642_101038693_101039174_101039223_101039488
transcript_23975.known	chr10	-	2032	10	FSM	ENSG00000186862.20	ENST00000370215.7	2032	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.17785547690558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACATCATCAGACATCTG	-10	True	NA	NA	False	NA	NA	NA	101031133	101017331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101017616_101018098_101018297_101018821_101019218_101020617_101020679_101021797_101021946_101022208_101022386_101023435_101023611_101023927_101024069_101029993_101030385_101031072
transcript_2398.nic	chr1	-	949	2	ISM	ENSG00000142599.19	ENST00000659924.1	2990	12	-459	219294	-90	129	5prime_fragment	FALSE	canonical	3	35	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCGAAAAAAAAGTCTCG	NA	False	NA	NA	False	AAGAAA	-1	NA	8817730	8656063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_8656442_8817159
transcript_2399.nic	chr1	-	736	2	ISM	ENSG00000142599.19	ENST00000659924.1	2990	12	-459	219507	-90	-84	5prime_fragment	FALSE	canonical	3	35	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAAGACAAAGAGAAGGA	NA	False	NA	-15	True	NA	NA	NA	8817730	8656276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_8656442_8817159
transcript_24.known	ERCC-00067	+	628	1	FSM	ERCC-00067A	DQ883653	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00067_+_0_600
transcript_2400.known	chr1	-	414	2	FSM	ENSG00000142599.19	ENST00000468247.1	414	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCACGCCGGAGCTGTAC	300	False	NA	21	True	NA	NA	NA	8703219	8656192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8656442_8703054
transcript_24000.known	chr10	+	2883	5	FSM	ENSG00000107816.17	ENST00000370223.7	2883	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	202.421589757615	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	5	True	NA	NA	False	ATTAAA	-25	NA	100997071	101007836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100997235_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_24003.nnic	chr10	+	2966	5	NNC	ENSG00000107816.17	novel	2883	5	NA	NA	-142	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	238.707456942593	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	9377	False	NA	NA	False	ATTAAA	-25	NA	100996929	101007836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_100997176_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_24011.nic	chr10	+	2938	5	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	-155	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	234.049540695982	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	1079	False	NA	NA	False	ATTAAA	-25	NA	100998192	101007836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_100998411_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_24019.nic	chr10	+	2894	5	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	334	junction_1	106.289698466032	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	0	True	NA	NA	False	ATTAAA	-25	NA	100999778	101007836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_100999953_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_24046.known	chr10	-	1057	4	FSM	ENSG00000186862.20	ENST00000470414.1	1057	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGGCAACATAGCAAGA	9	True	NA	NA	False	AAAACA	-45	NA	101031114	101023127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101023611_101023927_101024069_101029993_101030385_101031072
transcript_24053.known	chr10	+	3232	5	FSM	ENSG00000107821.15	ENST00000370200.6	3232	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATTCACCGCAAATAAA	4	True	NA	NA	False	AATAAA	-18	NA	101061988	101067059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101062116_101062541_101063104_101064260_101064422_101064500_101064649_101064825
transcript_24054.known	chr10	+	6024	15	FSM	ENSG00000166167.18	ENST00000370187.8	6024	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	30.6454377867711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGCGTCTTGTCTC	35	True	NA	16	True	ATTAAA	-6	NA	101354164	101557313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101354229_101430344_101430453_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_24056.known	chr10	+	5982	14	FSM	ENSG00000166167.18	ENST00000408038.6	5982	14	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	30.7555738922847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTTGTCTCCTTGCCCC	-23	True	NA	24	True	ATTAAA	-14	NA	101354106	101557321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101354229_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_24066.known	chr10	-	2308	9	FSM	ENSG00000166169.17	ENST00000370172.5	2308	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	30.4443652421922	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-42	True	NA	-5	True	AGTAAA	-18	NA	101588248	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587121_101587201_101588203
transcript_24067.known	chr10	-	2781	9	FSM	ENSG00000166169.17	ENST00000370162.8	2781	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.4054620111503	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-51	True	NA	-5	True	AGTAAA	-18	NA	101588257	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587821
transcript_24068.known	chr10	-	2670	9	FSM	ENSG00000166169.17	ENST00000299206.8	2670	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	20.3803673911929	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-3	True	NA	-5	True	AGTAAA	-18	NA	101588209	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587884
transcript_24069.nnic	chr10	-	2528	9	NNC	ENSG00000166169.17	novel	2781	9	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_8	26.2485118625799	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-7	True	NA	-5	True	AGTAAA	-18	NA	101588213	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101588030
transcript_2407.known	chr1	-	1837	13	FSM	ENSG00000074800.16	ENST00000646370.2	1837	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5511.96422692391	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATACTCCGTGTGCCTG	-3	True	NA	28	True	AATAAA	-18	NA	8878690	8861006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8870824_8870884_8871890_8871987_8874823_8874918_8878579
transcript_24070.nic	chr10	-	2421	9	NIC	ENSG00000166169.17	novel	2781	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	12	junction_8	22.9479710432099	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	NA	False	NA	-5	True	AGTAAA	-18	NA	101588279	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101588203
transcript_24080.known	chr10	-	2360	8	FSM	ENSG00000166169.17	ENST00000370169.5	2360	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	14.5546121450857	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	785	False	NA	-5	True	AGTAAA	-18	NA	101587421	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245
transcript_24082.nic	chr10	-	2876	8	NIC	ENSG00000166169.17	novel	2781	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	17	junction_4	22.6616641138325	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-7	True	NA	-5	True	AGTAAA	-18	NA	101588213	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584877_101584920_101585315_101585479_101585861_101586157_101587245
transcript_241.nnic	chr1	-	2375	10	NNC	ENSG00000227232.5	novel	1351	11	NA	NA	211	0	intron_retention	TRUE	canonical	3	101	junction_3	75.3244832559625	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	-3	True	NA	NA	False	AATAAA	-15	NA	29359	14403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_14830_14969_15039_15795_16766_16857_17056_17232_17369_17605_17743_17914_18062_18267_18367_24737_24892_29320
transcript_24101.known	chr10	+	641	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	218.585350734114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGACTGCAAGACCCA	20	True	NA	NA	False	ACTAAA	-26	NA	101588324	101609447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
transcript_24126.known	chr10	+	819	6	FSM	ENSG00000166171.13	ENST00000370151.9	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	25.5859336354959	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	16	True	NA	32	True	AGTAAA	-24	NA	101588320	101609662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101608834_101608938_101609366
transcript_24131.known	chr10	-	1953	6	FSM	ENSG00000166169.17	ENST00000628479.2	1953	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	33.9234432214656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTGGTGTCTGAGC	NA	False	NA	-7	True	AGTAAA	-16	NA	101588270	101578883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101587884
transcript_24133.known	chr10	-	784	6	FSM	ENSG00000166169.17	ENST00000429502.1	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	35.9833294735215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCGAGTTTGCCTGTGC	-26	True	NA	NA	False	NA	NA	NA	101588232	101579695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101588203
transcript_24146.known	chr10	-	2289	5	FSM	ENSG00000166169.17	ENST00000339310.7	2289	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	33.4439830163813	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	80	False	NA	-5	True	AGTAAA	-18	NA	101588126	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245
transcript_24163.nnic	chr10	-	2209	4	NIC	ENSG00000166169.17	novel	2289	5	NA	NA	8	0	intron_retention	FALSE	canonical	3	8	junction_3	38.1255236758206	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-14	True	NA	-5	True	AGTAAA	-18	NA	101588220	101578881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_101579818_101580247_101580417_101582762_101582892_101587245
transcript_24194.known	chr10	-	2482	9	FSM	ENSG00000107829.15	ENST00000664783.1	2482	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	30.6693556339223	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGGTTCCTCACTGGC	NA	False	NA	-5	True	AATAAA	-15	NA	101695259	101610666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101672914_101673048_101673487_101673674_101676340_101676437_101694380
transcript_24196.known	chr10	-	1114	6	FSM	ENSG00000107831.14	ENST00000344255.8	1114	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	6.34350061086148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTATTTTTGTATTC	0	True	NA	29	True	TTTAAA	-9	NA	101776114	101770130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101770620_101771462_101771570_101774731_101774880_101775129_101775217_101775739_101775777_101775868
transcript_24197.known	chr10	-	1169	6	FSM	ENSG00000107831.14	ENST00000320185.7	1169	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.21110255092798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGGTGTCTGTCT	0	True	NA	51	True	TTTAAA	-31	NA	101776114	101770108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101770620_101771462_101771570_101774731_101774913_101775129_101775217_101775739_101775777_101775868
transcript_24198.known	chr10	-	694	5	FSM	ENSG00000107831.14	ENST00000346714.7	694	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	6.80073525436772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCCCTCCCCACAATG	7430	False	NA	NA	False	NA	NA	NA	101775974	101770323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101770620_101771462_101771570_101774731_101774880_101775739_101775777_101775868
transcript_24202.known	chr10	-	877	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	4.42718872423573	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTGGCTTCTTCC	-9	True	NA	-7	True	AATAAA	-20	NA	101783413	101781324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
transcript_24206.known	chr10	-	755	5	FSM	ENSG00000107833.10	ENST00000474993.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	19.1702895126808	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGCTCTTGTGTGGC	6311	False	NA	-14	True	AATAAA	-13	NA	101783384	101781331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101783272
transcript_24207.known	chr10	-	481	5	FSM	ENSG00000107833.10	ENST00000462391.5	481	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.1912728672563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTTTCAACAATTGTAAA	6320	False	NA	NA	False	NA	NA	NA	101783375	101781588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101781633_101781726_101781855_101782477_101782598_101782838_101782925_101783272
transcript_24212.known	chr10	-	5174	16	FSM	ENSG00000198408.14	ENST00000361464.8	5174	16	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_2	245.071327485603	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCGTGTTGTATTGT	-2	True	NA	-13	True	AATAAA	-13	NA	101818444	101784449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_24225.known	chr10	-	3314	10	FSM	ENSG00000198408.14	ENST00000370094.7	3314	10	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	270.656723043037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	24	False	NA	NA	False	NA	NA	NA	101818418	101797045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_24231.nic	chr10	-	1827	9	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-57	2231	-10	-2231	5prime_fragment	FALSE	canonical	3	678	junction_2	259.07238370772	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGATGAAGAACCCAT	NA	False	NA	16	True	AAGAAA	-6	NA	101818475	101799276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_24236.nic	chr10	-	1527	8	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-57	3317	-10	-3317	5prime_fragment	FALSE	canonical	3	678	junction_1	254.394358813081	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAATGAAGGCAGTGA	NA	False	NA	-27	True	GATAAA	-2	NA	101818475	101800362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_24238.nic	chr10	-	1456	7	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-37	6702	10	-1	5prime_fragment	FALSE	canonical	3	852	junction_4	217.188602115509	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGTGATGAGTAAGTA	-13	True	NA	NA	False	NA	NA	NA	101818455	101803747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_24240.known	chr10	-	2089	8	FSM	ENSG00000120049.20	ENST00000348850.9	2089	8	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	2.43276948084663	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-16	True	NA	-5	True	AATAAA	-17	NA	101839872	101825973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_24241.known	chr10	-	663	8	FSM	ENSG00000120049.20	ENST00000343195.8	663	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	6.01019541941789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAGGAGAGGGGGTCAG	401	False	NA	NA	False	NA	NA	NA	101843568	101827352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101843495
transcript_24254.known	chr10	-	4099	26	FSM	ENSG00000120029.13	ENST00000370033.9	4099	26	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	19.9798298291052	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-17	True	NA	-3	True	ATTAAA	-23	NA	102056173	101845598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_24266.known	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	16.0526477566786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-37	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_24268.known	chr10	+	2688	1	FSM	ENSG00000166189.8	ENST00000299238.7	2688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	539	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTTGTGTGTTTTTA	-29	True	NA	8	True	AATATA	-17	NA	102065348	102068036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102065300_102068000
transcript_24273.known	chr10	-	2285	11	FSM	ENSG00000198728.11	ENST00000361198.9	2285	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	66.0608810113822	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	0	True	NA	-2	True	ATTAAA	-21	NA	102114946	102107559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102108324_102109028_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_24280.nic	chr10	-	2335	11	NIC	ENSG00000198728.11	novel	2285	11	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	68.5644951851904	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-2	True	NA	-2	True	ATTAAA	-21	NA	102115002	102107559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_102108324_102109034_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_24283.nic	chr10	-	3046	10	NIC	ENSG00000198728.11	novel	2285	11	NA	NA	-56	0	intron_retention	FALSE	canonical	3	28	junction_9	58.925565098879	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-2	True	NA	-2	True	ATTAAA	-21	NA	102115002	102107559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_24298.known	chr10	+	5328	14	FSM	ENSG00000148840.11	ENST00000278070.7	5328	14	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	57.6948717378943	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTGCGTCTTTAT	-8	True	NA	24	True	AATAAA	-24	NA	102133039	102150333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
transcript_24313.nnic	chr10	+	5167	13	NIC	ENSG00000148840.11	novel	5328	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	104.512725168863	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAAGGGGTATTTG	NA	False	NA	15	True	AATAAA	-18	NA	102132993	102150180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
transcript_24324.known	chr10	+	4580	12	FSM	ENSG00000148840.11	ENST00000413464.6	4580	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	109.012775049381	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGTTGTGCGTCTTT	NA	False	NA	22	True	AATAAA	-22	NA	102132993	102150331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
transcript_24345.nic	chr10	+	4146	6	ISM	ENSG00000148840.11	ENST00000413464.6	4580	12	0	6712	0	-1215	5prime_fragment	FALSE	canonical	3	297	junction_4	22.2710574513201	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCAAGCAGGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	102132993	102143619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044
transcript_2435.known	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	12558	junction_8	1320.48302582336	16378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	1	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
transcript_24354.known	chr10	+	2163	10	FSM	ENSG00000148840.11	ENST00000370012.1	2163	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	67.2669272835681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAAGGGGTATTTG	872	False	NA	15	True	AATAAA	-18	NA	102141491	102150180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102142005_102143044_102143099_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
transcript_24362.known	chr10	+	2441	13	FSM	ENSG00000166197.17	ENST00000488254.6	2441	13	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_2	231.493145446877	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGTGATTTTCAAA	12	False	NA	5	True	ATTAAA	-15	NA	102152403	102162600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_24365.known	chr10	+	3967	13	FSM	ENSG00000166197.17	ENST00000405356.5	3967	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	376.555182616779	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGAGTTTTATTATTGT	-14	True	NA	16	True	AATAAA	-21	NA	102152175	102163871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_24369.known	chr10	+	3723	13	FSM	ENSG00000166197.17	ENST00000605788.6	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_2	234.427968088755	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	-3	True	NA	15	True	AATAAA	-20	NA	102152388	102163870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_24373.known	chr10	+	3727	13	FSM	ENSG00000166197.17	ENST00000370007.5	3727	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	376.555182616779	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	6	False	NA	15	True	AATAAA	-20	NA	102152414	102163870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_24379.nic	chr10	+	1897	11	ISM	ENSG00000166197.17	ENST00000488254.6	2441	13	-47	946	-32	-945	5prime_fragment	FALSE	canonical	3	773	junction_2	248.694692343846	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	2	False	NA	NA	False	GATAAA	-30	NA	102152356	102161654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_24381.nic	chr10	+	1938	11	ISM	ENSG00000166197.17	ENST00000605788.6	3723	13	-76	2216	-76	-945	5prime_fragment	FALSE	canonical	3	758	junction_2	252.051185277911	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	65	False	NA	NA	False	GATAAA	-30	NA	102152312	102161654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_24391.nic	chr10	+	889	7	ISM	ENSG00000166197.17	ENST00000488254.6	2441	13	-39	3051	-24	-389	5prime_fragment	FALSE	canonical	3	773	junction_2	307.81564648702	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATGAAAAATAAACCAGG	10	False	NA	NA	False	NA	NA	NA	102152364	102159549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432
transcript_24393.nic	chr10	+	871	7	ISM	ENSG00000166197.17	ENST00000605788.6	3723	13	-9	4321	-9	-389	5prime_fragment	FALSE	canonical	3	758	junction_2	312.045758752712	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATGAAAAATAAACCAGG	25	False	NA	NA	False	NA	NA	NA	102152379	102159549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432
transcript_24397.known	chr10	+	1400	4	FSM	ENSG00000119915.5	ENST00000370005.4	1400	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAGTTGGGGGATTT	-1	True	NA	NA	False	ATTAAA	-14	NA	102226298	102229589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102226650_102227625_102227758_102228416_102228569_102228824
transcript_24398.known	chr10	-	1426	4	FSM	ENSG00000107859.10	ENST00000370002.8	1426	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCGTGATGATTCAAAG	-3	True	NA	NA	False	AATAAA	-16	NA	102241512	102230188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102231102_102231587_102231791_102231962_102232093_102241332
transcript_24400.known	chr10	+	6352	40	FSM	ENSG00000107862.7	ENST00000677439.1	6352	40	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	27.5780644425201	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACCAGCATCATTGTCT	-10	True	NA	24	True	AATAAA	-6	NA	102245520	102382885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362629_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
transcript_24401.known	chr10	+	5736	40	FSM	ENSG00000107862.7	ENST00000676993.1	5736	40	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_16	20.336841292122	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCCCACTTCTGGCTGT	140	False	NA	NA	False	NA	NA	NA	102245670	102382383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
transcript_24404.known	chr10	+	6437	40	FSM	ENSG00000107862.7	ENST00000676939.1	6437	40	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_33	23.174693173412	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCTCCCTCCGGTTTC	NA	False	NA	38	True	AATAAA	-20	NA	102245497	102382899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377141_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
transcript_24406.known	chr10	+	3411	23	FSM	ENSG00000077150.20	ENST00000428099.6	3411	23	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	12.3716551536029	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	NA	False	NA	29	True	AATAAA	-42	NA	102394109	102402524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102394601_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
transcript_24407.known	chr10	+	3195	23	FSM	ENSG00000077150.20	ENST00000369966.8	3195	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.7323924883147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	-37	True	NA	29	True	AATAAA	-42	NA	102394502	102402524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102394775_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402251
transcript_24408.known	chr10	+	3015	23	FSM	ENSG00000077150.20	ENST00000661543.1	3015	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	11.6286373497315	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	-6	True	NA	29	True	AATAAA	-42	NA	102395704	102402524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402251
transcript_24412.known	chr10	+	3114	22	FSM	ENSG00000077150.20	ENST00000652277.1	3114	22	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	9.36050466689952	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCCCCTGATGTGAC	18	False	NA	28	True	AATAAA	-41	NA	102395692	102402523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
transcript_24416.known	chr10	+	1634	12	FSM	ENSG00000077150.20	ENST00000467116.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	8.57152695732594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	-5	True	NA	NA	False	NA	NA	NA	102395705	102399218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738
transcript_24418.known	chr10	-	3824	17	FSM	ENSG00000059915.17	ENST00000020673.6	3824	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	5.03076472815018	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGGCCTCCTCCTTCT	-2	True	NA	-3	True	ATTAAA	-17	NA	102418785	102402618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102403431_102403841_102403986_102404582_102404728_102404897_102405056_102405182_102405254_102405345_102405537_102407222_102407267_102410857_102410948_102411057_102411117_102411706_102411820_102412146_102412228_102412380_102412576_102413768_102414198_102414862_102415230_102416016_102416120_102416384_102417122_102418700
transcript_24426.nic	chr10	-	1826	8	ISM	ENSG00000059915.17	ENST00000020673.6	3824	17	7667	0	638	0	intron_retention	TRUE	canonical	3	9	junction_5	3.73073281634303	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGGCCTCCTCCTTCT	9071	False	NA	-3	True	ATTAAA	-17	NA	102411118	102402618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_102403431_102403841_102403986_102404582_102404728_102404897_102405056_102405182_102405254_102405345_102405537_102407222_102407267_102410857
transcript_24431.nic	chr10	+	2337	5	NIC	ENSG00000107872.14	novel	1340	4	NA	NA	-69	0	intron_retention	TRUE	canonical	3	58	junction_1	58.5170915203413	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	463	False	NA	26	True	AATAAA	-16	NA	102419744	102423136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102420958_102421051_102421183_102421353_102421508_102421786_102422293_102422803
transcript_24436.nic	chr10	+	1530	4	NIC	ENSG00000107872.14	novel	1340	4	NA	NA	-5	0	intron_retention	FALSE	canonical	3	58	junction_1	67.4306227828936	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	-5	True	NA	26	True	AATAAA	-16	NA	102420830	102423136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102420958_102421051_102421183_102421353_102422293_102422803
transcript_24440.known	chr10	-	590	3	FSM	ENSG00000059915.17	ENST00000472685.5	590	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGGGTTTCTCCTCCC	-8	True	NA	NA	False	GGGGCT	-19	NA	102419718	102416653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102417122_102418700_102418760_102419655
transcript_24443.known	chr10	+	1340	4	FSM	ENSG00000107872.14	ENST00000369956.8	1340	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	39.2513269414763	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	0	True	NA	26	True	AATAAA	-16	NA	102420835	102423136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102421183_102421353_102421508_102421786_102422293_102422803
transcript_24447.known	chr10	-	1100	9	FSM	ENSG00000107874.11	ENST00000369937.5	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_4	46.8341488659717	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGTGCATTCTGGTC	19	True	NA	-8	True	AGTAAA	-15	NA	102432574	102423248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102423573_102423656_102423718_102423797_102423860_102423995_102424179_102424263_102424395_102424498_102424561_102424648_102424793_102425114_102425199_102432525
transcript_24457.known	chr10	+	1483	5	FSM	ENSG00000269609.6	ENST00000663480.1	1483	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	41.9195658374464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTTGTCTTGTTTT	13	True	NA	-4	True	NA	NA	NA	102449869	102456267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102450023_102450186_102450331_102451398_102451556_102452089_102452188_102455336
transcript_24458.nnic	chr10	+	1469	4	NIC	ENSG00000269609.6	novel	1483	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	45.3210767744986	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	NA	False	NA	26	True	AATAAA	-24	NA	102449815	102456297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102450023_102450186_102450331_102451398_102451556_102455336
transcript_24460.known	chr10	+	1312	3	FSM	ENSG00000269609.6	ENST00000473970.3	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	8	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	NA	False	NA	26	True	AATAAA	-24	NA	102449815	102456297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102450023_102450186_102450331_102455336
transcript_24464.known	chr10	-	1469	2	FSM	ENSG00000120055.7	ENST00000625129.1	1469	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	102451543	102449836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102451148_102451385
transcript_24477.known	chr10	-	2830	11	FSM	ENSG00000138107.13	ENST00000369905.9	2830	11	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	53.0456407256996	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	5	True	NA	-11	True	AATAAA	-22	NA	102502712	102479228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
transcript_24482.known	chr10	+	2852	10	FSM	ENSG00000138111.14	ENST00000238936.8	2852	10	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	7.37864787372622	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	-11	True	NA	23	True	ATTAAA	-23	NA	102461394	102477045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102461451_102465981_102466088_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
transcript_24485.nic	chr10	-	2779	10	NIC	ENSG00000138107.13	novel	2830	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	256.148008911129	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCTATCTGTCT	-10	True	NA	-12	True	AATAAA	-21	NA	102502727	102479229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102502599
transcript_24511.known	chr10	+	5016	12	FSM	ENSG00000107882.12	ENST00000369902.8	5016	12	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	7.08974349394372	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGCCACTTAGAAGCC	2	True	NA	95	True	NA	NA	NA	102503971	102633535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102504335_102509168_102509304_102549969_102550107_102592581_102592725_102593635_102593722_102593992_102594066_102597139_102597294_102599432_102599545_102615267_102615403_102617289_102617429_102627174_102627244_102630065
transcript_24514.known	chr10	+	1839	11	FSM	ENSG00000107882.12	ENST00000369899.6	1839	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	17.7045191970864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGGCCTGTGTTATGG	-7	True	NA	10	True	AATAAA	-24	NA	102504006	102619462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102504335_102509168_102509304_102549969_102550107_102592581_102592725_102593635_102593722_102593992_102594066_102597139_102597294_102599432_102599545_102615267_102615403_102617289_102617429_102619065
transcript_24518.known	chr10	+	883	5	FSM	ENSG00000171206.15	ENST00000462202.3	883	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.4924641362465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTGCAGCTCCACGCA	408	False	NA	NA	False	NA	NA	NA	102644886	102656946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102645188_102655079_102655314_102656105_102656138_102656269_102656386_102656746
transcript_24520.known	chr10	+	2759	6	FSM	ENSG00000171206.15	ENST00000643721.2	2759	6	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_1	44.8035712862267	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCCTCGCCTGTTCC	0	True	NA	17	True	AATAAA	-19	NA	102644478	102658318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102645188_102654652_102654749_102655079_102655314_102656105_102656138_102656269_102656386_102656746
transcript_24521.known	chr10	+	3048	5	FSM	ENSG00000171206.15	ENST00000302424.12	3048	5	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_1	48.5869066724771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAGAGCACACACCAAA	16	True	NA	-39	True	NA	NA	NA	102644494	102658262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102645188_102654652_102654749_102655079_102655314_102656105_102656138_102656269
transcript_24522.known	chr10	-	3834	6	FSM	ENSG00000138175.9	ENST00000260746.6	3834	6	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_5	148.070253596055	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTGGAATGTGTTGT	14	True	NA	-10	True	AATAAA	-17	NA	102714397	102673730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102676942_102685815_102686002_102689892_102689944_102699372_102699490_102705345_102705490_102714272
transcript_24531.known	chr10	+	6770	12	FSM	ENSG00000156398.13	ENST00000369893.10	6770	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	15.2662323852242	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTCTTCAGGAGC	13	True	NA	NA	False	ATTAAA	-18	NA	102714635	102743492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_24540.known	chr10	+	667	5	FSM	ENSG00000156398.13	ENST00000602660.1	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	14.0956553590104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGGCTGGCCAAGTGA	36	False	NA	NA	False	NA	NA	NA	102714658	102729506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318
transcript_24541.nic	chr10	+	1906	5	NIC	ENSG00000156398.13	novel	2324	10	NA	NA	0	1611	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	43.643441660804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCATGGTGGCGC	4	True	NA	NA	False	AAAACA	-11	NA	102714626	102731117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729722
transcript_24543.known	chr10	+	584	4	FSM	ENSG00000156398.13	ENST00000602287.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	14.2672897060218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTAAAGGGTTCTGGG	-22	True	NA	NA	False	NA	NA	NA	102714600	102728576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430
transcript_24545.nnic	chr10	+	4055	5	NNC	ENSG00000166272.18	novel	4129	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.6153997656724	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGCTCTTTCTTGCT	-4	True	NA	19	True	AATAAA	-16	NA	102743950	102816262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_102744026_102744096_102744144_102797992_102798096_102809892_102810055_102812594
transcript_24548.known	chr10	+	4129	4	FSM	ENSG00000166272.18	ENST00000448841.7	4129	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	10.9645894689324	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGCTCTTTCTTGCT	-7	True	NA	19	True	AATAAA	-16	NA	102743947	102816262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102744144_102797992_102798096_102809892_102810055_102812594
transcript_24550.known	chr10	+	15857	8	FSM	ENSG00000148842.18	ENST00000369878.9	15857	8	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_6	15.9885162870488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTTTTTCTTGAGAT	-13	True	NA	NA	False	AATAAA	-16	NA	102918293	103090222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102920102_103049706_103049851_103054328_103054467_103056794_103056965_103068628_103068723_103071773_103071840_103076085_103076271_103076970
transcript_24553.known	chr10	+	3857	7	FSM	ENSG00000148842.18	ENST00000433628.2	3857	7	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	4.76095228569523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGGCCCGGCAGTGGC	3	True	NA	NA	False	NA	NA	NA	102918356	103078351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102920102_103049706_103049851_103054328_103054467_103056794_103056965_103068628_103068723_103076085_103076271_103076970
transcript_24558.known	chr10	+	2059	2	FSM	ENSG00000148842.18	ENST00000369875.3	2059	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCGTGGTGGTGGGTG	10	True	NA	NA	False	AATAAA	-16	NA	102918316	102927618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102920102_102927344
transcript_24560.known	chr10	+	1723	13	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	46	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	23.7034631787565	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACATCTTTGAATCAAG	42	False	NA	NA	False	AATAAA	-16	NA	102869515	102901894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890655_102890655_102890679_102900592_102900800_102901474
transcript_24563.known	chr10	+	2450	11	FSM	ENSG00000214435.9	ENST00000369880.8	2450	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.62193325245732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	-4	True	NA	NA	False	AATAAA	-21	NA	102869469	102901899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_24565.known	chr10	+	2386	5	FSM	ENSG00000166275.16	ENST00000339834.10	2386	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	4.94974746830583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAGGGATAGAGTGGAA	-10	True	NA	NA	False	AAGAAA	-22	NA	102854258	102864961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872
transcript_24569.known	chr10	+	838	6	FSM	ENSG00000166275.16	ENST00000369883.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	23.6186367091752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTCATATTGTTATTG	-7	True	NA	NA	False	AATAAA	-23	NA	102854261	102864213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872_102862933_102863729
transcript_24582.nic	chr10	-	3322	19	NIC	ENSG00000076685.19	novel	3614	21	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_13	108.726409389648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	3942	False	NA	-31	True	AATAAA	-7	NA	103193315	103088163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_24584.known	chr10	-	3525	19	FSM	ENSG00000076685.19	ENST00000404739.8	3525	19	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_17	92.3316118304553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	6	True	NA	-9	True	AATAAA	-15	NA	103193272	103088037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181184_103181329_103193235
transcript_24585.nnic	chr10	-	3424	19	NNC	ENSG00000076685.19	novel	3192	20	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_17	90.6268294834495	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	3914	False	NA	-31	True	AATAAA	-7	NA	103193343	103088163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
transcript_24586.known	chr10	-	3435	18	FSM	ENSG00000076685.19	ENST00000343289.9	3435	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	56.5892747856097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	3951	False	NA	11	True	AATAAA	-35	NA	103193306	103088017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_24593.known	chr10	-	3413	17	FSM	ENSG00000076685.19	ENST00000675985.1	3413	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_16	98.1417780241931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAATAAAGTGTAATAT	-4	True	NA	-48	True	NA	NA	NA	103153627	103088180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103153290
transcript_24596.known	chr10	+	3251	3	FSM	ENSG00000148798.11	ENST00000369849.9	3251	3	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	8.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATTCGTGTTCTGTGGT	-1	True	NA	15	True	AATAAA	-26	NA	103277137	103290346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103278277_103287034_103287160_103288359
transcript_24599.known	chr10	-	2236	10	FSM	ENSG00000156374.16	ENST00000369847.4	2236	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	24.5029602645965	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	5	True	NA	0	True	AATAAA	-17	NA	103351140	103302795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_24600.known	chr10	-	1868	10	FSM	ENSG00000156374.16	ENST00000490296.1	1868	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	56.3371683989343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAGAAGTTTACAGAA	20	True	NA	NA	False	AATAAA	-13	NA	103351081	103303126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347320_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_24602.known	chr10	-	1950	7	FSM	ENSG00000156374.16	ENST00000337211.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	66.9271992541149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	22	True	NA	0	True	AATAAA	-17	NA	103351079	103302795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103348715_103348813_103348899_103349000_103350706
transcript_24604.known	chr10	+	3259	11	FSM	ENSG00000148835.12	ENST00000369839.4	3259	11	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	21.1530139696451	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAATT	6	True	NA	15	True	AATAAA	-27	NA	103367975	103389065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103368549_103373357_103373596_103378234_103378551_103379607_103379772_103379883_103380020_103381720_103381842_103383237_103383368_103385325_103385491_103387174_103387353_103387520_103387699_103388005
transcript_24609.known	chr10	-	882	6	FSM	ENSG00000173915.16	ENST00000369825.6	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	2943.7000118898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTACAAGATATCAA	NA	False	NA	7	True	AATAAA	-26	NA	103396492	103389040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103395745_103396033_103396408
transcript_24610.known	chr10	-	560	5	FSM	ENSG00000173915.16	ENST00000337003.4	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	3000.45832957233	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	0	True	NA	-2	True	AATAAA	-17	NA	103396466	103389049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103396408
transcript_24612.known	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	2912.36899919979	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-9	True	NA	-2	True	AATAAA	-17	NA	103396475	103389049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
transcript_24614.nic	chr10	+	1220	4	ISM	ENSG00000148835.12	ENST00000690667.1	1827	7	-36	5940	-12	1135	5prime_fragment	FALSE	canonical	3	150	junction_3	16.2138486760204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAGGAAAACCTAAAA	-16	True	NA	17	True	NA	NA	NA	103367953	103379678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_103368549_103373357_103373596_103378234_103378551_103379607
transcript_24616.known	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5119	junction_3	515.528423615571	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	0	True	NA	-2	True	AATAAA	-17	NA	103396466	103389049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
transcript_24621.known	chr10	+	6467	36	FSM	ENSG00000148843.15	ENST00000649849.1	6467	36	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_31	59.308560142044	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTGGCAGAGCTTTAA	-24	True	NA	4	True	ATTAAA	-4	NA	103396625	103446281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825_103441976_103442209_103442461_103443164_103443334_103443914_103444069_103444516_103444683_103445377
transcript_24626.nic	chr10	+	4840	31	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	-17	4306	-17	-3749	5prime_fragment	FALSE	canonical	3	257	junction_15	36.0138245060915	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTATTTTGCAGGGCA	-41	True	NA	7	True	NA	NA	NA	103396608	103441975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825
transcript_24633.nic	chr10	+	4437	29	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	-17	5836	-17	-5279	5prime_fragment	TRUE	canonical	3	257	junction_15	33.2825718933609	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGAAAAGGAACGAGAAGA	-41	True	NA	21	True	AAAAAG	-14	NA	103396608	103440445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289
transcript_24646.nic	chr10	+	484	4	ISM	ENSG00000148843.15	ENST00000493610.2	732	6	-41	4614	-17	-4614	5prime_fragment	FALSE	canonical	2	4	junction_2	163.20607287176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATCGAAAAGAGAG	-41	True	NA	NA	False	AAAAAG	-30	NA	103396608	103400461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_103396731_103398415_103398529_103399646_103399831_103400396
transcript_24647.nnic	chr10	+	397	4	NNC	ENSG00000148843.15	novel	732	6	NA	NA	-17	-4614	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	161.969132861789	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATCGAAAAGAGAG	-41	True	NA	NA	False	AAAAAG	-30	NA	103396608	103400461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_103396731_103398415_103398529_103399733_103399831_103400396
transcript_24650.nic	chr10	+	300	3	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	-17	45820	-17	-4614	5prime_fragment	FALSE	canonical	3	275	junction_2	41	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATCGAAAAGAGAG	-41	True	NA	NA	False	AAAAAG	-30	NA	103396608	103400461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_103396731_103398415_103398529_103400396
transcript_24652.known	chr10	-	1914	4	FSM	ENSG00000138172.11	ENST00000260743.10	1914	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	-1	True	NA	NA	False	GATAAA	-20	NA	103452370	103446785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103447569_103449386_103450100_103451082_103451286_103452155
transcript_24655.known	chr10	+	657	2	FSM	ENSG00000234699.1	ENST00000411906.1	657	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTACTGTGGCCCA	NA	False	NA	NA	False	AATAAA	-19	NA	103452845	103462695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103453237_103462429
transcript_24657.known	chr10	-	1652	3	FSM	ENSG00000183128.7	ENST00000369783.4	1652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCATTTGTGTAATTGTC	NA	False	NA	NA	False	NA	NA	NA	103479240	103472803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103473705_103476293_103476550_103478745
transcript_24658.known	chr10	+	4314	6	FSM	ENSG00000107954.11	ENST00000369780.9	4582	6	274	-6	274	6	multi-exon	FALSE	canonical	0	0	junction_1	2.1540659228538	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGTGCTGTGCGCAGAG	43	False	NA	NA	False	AATAAA	-22	NA	103493978	103592552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103494473_103570871_103571114_103571500_103571823_103584535_103585226_103589513_103589661_103590133
transcript_24661.nic	chr10	-	5070	8	ISM	ENSG00000107957.17	ENST00000420222.2	3039	9	-26	-1483	-26	0	intron_retention	FALSE	canonical	3	11	junction_5	6.80036013452109	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGGTTGTGTTTTTCA	9	True	NA	-1	True	AATAAA	-23	NA	103661730	103600291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_103603790_103605797_103605918_103611580_103611631_103612852_103613191_103617196_103617315_103622469_103622554_103627088_103627203_103660982
transcript_24663.nic	chr10	-	3539	8	ISM	ENSG00000107957.17	ENST00000420222.2	3039	9	-26	48	-26	-48	intron_retention	FALSE	canonical	3	11	junction_5	6.80036013452109	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAGCAGAGGGCCTGGG	9	True	NA	NA	False	NA	NA	NA	103661730	103601822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_103603790_103605797_103605918_103611580_103611631_103612852_103613191_103617196_103617315_103622469_103622554_103627088_103627203_103660982
transcript_24666.known	chr10	-	1414	11	FSM	ENSG00000107960.11	ENST00000466828.5	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	49.8438561911094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	52	True	NA	-54	True	AATAAA	-13	NA	103918130	103882554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898292_103898378_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_24667.known	chr10	-	6369	10	FSM	ENSG00000107960.11	ENST00000224950.8	6369	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	10.6504506367305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGCAAAAGGTTCTGTG	-2	True	NA	-7	True	AATAAA	-20	NA	103918184	103877568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_24676.nic	chr10	-	2861	25	NIC	ENSG00000065618.21	novel	5612	56	NA	NA	9784	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	2.66894433978847	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGTTTAATGTGATTC	NA	False	NA	NA	False	ATTAAA	-18	NA	104046185	104031287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_104031594_104032203_104032291_104032673_104032755_104032905_104032969_104033237_104033376_104033944_104034335_104034620_104034768_104035262_104035374_104035473_104035564_104036491_104036633_104037044_104037114_104037635_104037774_104038405_104038529_104039070_104039122_104039444_104039520_104039607_104039641_104039972_104040000_104040350_104040411_104041064_104041119_104041302_104041345_104041484_104041539_104042419_104042456_104043500_104043582_104043824_104043861_104045757
transcript_24678.known	chr10	+	1503	4	FSM	ENSG00000156384.15	ENST00000369729.7	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	50.7630661888039	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTGTCTCTTCAAA	19	False	NA	12	True	ATTAAA	-21	NA	104122057	104126385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104122155_104122964_104123087_104123713_104124125_104125512
transcript_24679.known	chr10	+	1430	4	FSM	ENSG00000156384.15	ENST00000369727.4	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	32.5610537640019	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCCTGTCTCTTCA	8	True	NA	10	True	ATTAAA	-19	NA	104122170	104126383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104122197_104122964_104123087_104123713_104124125_104125512
transcript_24685.known	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	346.124486276253	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	17	False	NA	24	True	AATAAA	-32	NA	104254193	104267459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_24686.known	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	54.2387315485899	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	-5	True	NA	20	True	AATAAA	-28	NA	104254891	104267455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_24687.known	chr10	+	900	5	FSM	ENSG00000148834.13	ENST00000369710.8	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	353.458979232386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	533	False	NA	24	True	AATAAA	-32	NA	104254709	104267459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104266083_104266191_104267251
transcript_24690.known	chr10	+	6715	7	FSM	ENSG00000065621.15	ENST00000338595.7	6715	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.6161810688017	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAATCTCGCTACTCTG	2	True	NA	14	True	AATAAA	-28	NA	104269183	104304950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_24692.known	chr10	+	1391	6	FSM	ENSG00000065621.15	ENST00000450629.6	1391	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.2343634682817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCTGATAATCATTTG	9	True	NA	17	True	AATAAA	-18	NA	104268872	104299417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104297577_104297685_104299127
transcript_24695.known	chr10	+	6423	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	24.8231242997331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCAGAATCTCGCTA	9	True	NA	9	True	AATAAA	-23	NA	104275161	104304945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_24702.known	chr10	-	6585	2	FSM	ENSG00000148841.17	ENST00000337478.3	6585	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTCTTCTTGGTTATCT	-13	True	NA	NA	False	CATAAA	-15	NA	104338465	104309699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_104316065_104338245
transcript_24704.known	chr10	+	5575	27	FSM	ENSG00000156395.14	ENST00000369701.8	5575	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.18671143234935	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGTGGCTGAGTTTTCT	-7	True	NA	NA	False	AATAAA	-24	NA	104641289	105265242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104641955_104842791_104842860_104915832_104915933_104977334_104977494_105043054_105043129_105089774_105089840_105105396_105105516_105139396_105139487_105147616_105147797_105157137_105157285_105158891_105158995_105164302_105164380_105167257_105167350_105178065_105178174_105199998_105200117_105201119_105201254_105211136_105211251_105214441_105214614_105216935_105217123_105223115_105223250_105245541_105245666_105247218_105247332_105252774_105252907_105255701_105255802_105256818_105256925_105262330_105262492_105263309
transcript_24717.known	chr10	-	2497	21	FSM	ENSG00000108039.18	ENST00000502935.6	2497	21	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	24.6777227474498	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-39	True	NA	-5	True	AATAAA	-16	NA	109923511	109864765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_24723.nic	chr10	-	2468	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_19	57.4143707820539	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	109923571	109864765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109923401
transcript_24731.known	chr10	-	2467	20	FSM	ENSG00000108039.18	ENST00000322238.12	2467	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	61.5820062218235	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-1	True	NA	-5	True	AATAAA	-16	NA	109923553	109864765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_24733.nnic	chr10	-	2334	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	61.7596090295204	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	30	False	NA	-5	True	AATAAA	-16	NA	109923522	109864765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_24734.known	chr10	-	2344	19	FSM	ENSG00000108039.18	ENST00000369683.5	2344	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	80.2239919780167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-39	True	NA	-5	True	AATAAA	-16	NA	109923511	109864765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109907690_109907816_109923401
transcript_24754.known	chr10	+	4413	15	FSM	ENSG00000148700.15	ENST00000356080.9	4413	15	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_5	54.9313579081443	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTGTATCATGAGGTT	2	True	NA	NA	False	AATAAA	-17	NA	110007983	110135565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304_110132401_110133325
transcript_24761.nic	chr10	+	2227	14	ISM	ENSG00000148700.15	ENST00000356080.9	4413	15	-61	3172	-41	-334	5prime_fragment	FALSE	canonical	3	456	junction_5	56.0667396050531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGGTACTCAATGTAA	1823	False	NA	20	True	NA	NA	NA	110007922	110132393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304
transcript_24774.nic	chr10	+	1865	11	ISM	ENSG00000148700.15	ENST00000356080.9	4413	15	-9	9630	-9	1767	5prime_fragment	FALSE	canonical	3	456	junction_5	46.8829393276488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATAAGGTAAGACATG	-7	True	NA	NA	False	TTTAAA	-28	NA	110007974	110125935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825
transcript_24783.known	chr10	+	2424	6	FSM	ENSG00000119950.21	ENST00000239007.11	2424	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	26.5781865446083	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATGATTTTCATAACT	7	True	NA	33	True	TTTAAA	-39	NA	110225992	110286506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110226284_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_24786.known	chr10	+	2255	6	FSM	ENSG00000119950.21	ENST00000650843.1	2255	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.1492585937167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAGAAAATAAAGAC	1004	False	NA	-13	True	NA	NA	NA	110227086	110286596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110227119_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_24790.known	chr10	+	2256	6	FSM	ENSG00000119950.21	ENST00000652649.1	2256	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5487955176172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTACTTAAAAAAAAAA	121	False	NA	9	True	TTTAAA	-15	NA	110226203	110286482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110226351_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_24791.known	chr10	+	2303	6	FSM	ENSG00000119950.21	ENST00000650810.1	2303	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5487955176172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAACCATATTTAGC	0	True	NA	0	True	AAAAAG	-5	NA	110227339	110286609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110227407_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_24793.nic	chr10	-	2252	7	NIC	ENSG00000119953.14	novel	4310	6	NA	NA	-46	1020	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	83.9392968493039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTGTGTTAACAAAAGG	NA	False	NA	NA	False	AATAAA	-17	NA	110304984	110293041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110300546_110300737_110303467_110303588_110304747
transcript_24794.known	chr10	-	1110	6	FSM	ENSG00000119953.14	ENST00000369592.1	1110	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	74.5036911837259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAGCAAGATACCATT	246	False	NA	NA	False	NA	NA	NA	110304697	110294061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304392
transcript_24795.known	chr10	-	4310	6	FSM	ENSG00000119953.14	ENST00000369603.10	4310	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	15.7098695093244	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGATTCAATAAATATCA	23	True	NA	NA	False	ATTAAA	-28	NA	110304920	110290729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304747
transcript_24797.known	chr10	-	753	5	FSM	ENSG00000119953.14	ENST00000460483.5	753	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	71.7857054015631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGTAAATCTTTTTAC	37	False	NA	NA	False	AAAAAG	-4	NA	110304906	110295229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110295382_110297566_110297746_110298647_110298791_110303467_110303588_110304747
transcript_24798.nic	chr10	-	659	4	ISM	ENSG00000119953.14	ENST00000369603.10	4310	6	-64	6840	-46	0	5prime_fragment	FALSE	canonical	3	169	junction_2	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	NA	False	NA	0	True	NA	NA	NA	110304984	110297569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_110297729_110298647_110298791_110303467_110303588_110304747
transcript_24799.known	chr10	-	209	2	FSM	ENSG00000273143.2	ENST00000607952.1	209	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCACCTCCTGGCTCA	5160	False	NA	NA	False	NA	NA	NA	110496204	110475103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110475227_110496118
transcript_24800.known	chr10	+	5522	29	FSM	ENSG00000108055.11	ENST00000361804.5	5522	29	0	0	0	0	multi-exon	FALSE	non_canonical	3	962	junction_19	108.884762853361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAGCCTATATT	-18	True	NA	NA	False	AATAAA	-23	NA	110567694	110606048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604_110589709_110589891_110589992_110590411_110590573_110590990_110591133_110593072_110593224_110596397_110596551_110598138_110598291_110599653_110599813_110600438_110600547_110601021_110601131_110601636_110601885_110601965_110602179_110602473_110602666_110602824_110603003_110603183_110603291_110604230
transcript_24804.nic	chr10	+	1540	14	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	2514	-21	-1401	5prime_fragment	FALSE	canonical	3	1051	junction_6	89.2456884079465	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAACTACAAAGTGAAAG	NA	False	NA	NA	False	AGTAAA	-11	NA	110567662	110589685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604
transcript_24806.nic	chr10	+	1325	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	7937	-21	2256	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.3054953502802	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGATAAGTGGATTAAAAAG	NA	False	NA	NA	False	AAGAAA	-1	NA	110567662	110584262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_24807.nic	chr10	+	1443	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	7819	-21	2374	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.3054953502802	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAGCAGTATAATGTAA	NA	False	NA	NA	False	AATAAA	-9	NA	110567662	110584380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_24810.nic	chr10	+	1219	12	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	8263	-21	1930	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.7575209402092	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACGAGGAAT	NA	False	NA	19	True	NA	NA	NA	110567662	110583936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840
transcript_24814.nic	chr10	+	1018	11	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	8756	-21	1437	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.9128118942513	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTAGTGCTGAAAG	NA	False	NA	31	True	AAGAAA	-3	NA	110567662	110583443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383
transcript_24816.nic	chr10	+	958	10	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	9557	-21	636	5prime_fragment	FALSE	canonical	3	1051	junction_6	87.3949457532292	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATTATAAACAAGGTT	NA	False	NA	NA	False	GATAAA	-7	NA	110567662	110582642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561
transcript_24818.nic	chr10	+	785	9	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	10193	-21	0	5prime_fragment	FALSE	canonical	3	1051	junction_6	92.262448347093	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTATCAGAAGTGGGAT	NA	False	NA	NA	False	AAGAAA	-13	NA	110567662	110582006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922
transcript_24821.nic	chr10	+	701	8	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	11178	-21	-985	5prime_fragment	FALSE	canonical	3	1051	junction_6	94.9448819697244	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATAAATGTGATTCTG	NA	False	NA	NA	False	AAGAAA	-25	NA	110567662	110581021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903
transcript_24826.known	chr10	+	3697	13	FSM	ENSG00000150593.18	ENST00000393104.6	3697	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	63.1550121174524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAGTTGTATTTAAT	0	True	NA	NA	False	AATAAA	-19	NA	110871794	110900005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110872019_110875965_110876071_110876669_110876754_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_24828.known	chr10	+	3481	12	FSM	ENSG00000150593.18	ENST00000280154.12	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	21.5966021202525	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGTTGTATTTAATC	7	True	NA	NA	False	AATAAA	-20	NA	110871927	110900006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110872019_110875965_110876071_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_24832.nic	chr10	+	2196	12	NIC	ENSG00000150593.18	novel	3481	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	47.0173170137722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACATGTGAAGCAGT	-7	True	NA	-13	True	AATGAA	-27	NA	110871882	110898718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_110872019_110875965_110876071_110881274_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_24835.known	chr10	-	2025	4	FSM	ENSG00000214413.9	ENST00000448814.7	2025	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTATTTTGGTGTAC	-4	True	NA	-8	True	AATAAA	-18	NA	110919180	110898729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110919120
transcript_24840.known	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	54.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	164	False	110919224	1	True	ATTAAA	-24	NA	110919201	110899955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901537_110901613_110919120
transcript_24845.known	chr10	-	778	2	FSM	ENSG00000203497.3	ENST00000420367.2	925	2	20	127	20	-127	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGC	16	True	NA	NA	False	NA	NA	NA	110872233	110869867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110870439_110872026
transcript_24847.known	chr10	-	616	5	FSM	ENSG00000214413.9	ENST00000398289.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.8925085963467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAAAATATCCAAGATT	-6	True	NA	-21	True	AATAAA	-20	NA	110919182	110900237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901025_110901123_110901537_110901613_110918120_110918214_110919120
transcript_24848.known	chr10	+	3884	9	FSM	ENSG00000108061.13	ENST00000369452.9	3884	9	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_2	15.483862567202	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	-6	True	NA	14	True	TATAAA	-29	NA	110919603	111013665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110919658_110964124_110965062_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_24851.nic	chr10	+	347	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-28	5809	-3	-344	multi-exon	FALSE	canonical	3	218	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTAAAGAAAAAGATCC	-4	True	NA	NA	False	AAGAAA	-3	NA	110919571	110964385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110919658_110964124
transcript_24852.nic	chr10	+	443	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-28	5713	-3	-248	multi-exon	FALSE	canonical	3	218	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCTAAGACCAAAGGGAA	-4	True	NA	NA	False	AAGAAA	-3	NA	110919571	110964481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110919658_110964124
transcript_24853.known	chr10	-	6372	22	FSM	ENSG00000119927.14	ENST00000348367.9	6372	22	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	8.26872916996123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATGTGTTTGATTTG	-32	True	NA	-1	True	AATAAA	-17	NA	112183765	112149864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112153667_112154628_112154688_112155863_112156054_112157248_112157390_112158315_112158394_112159910_112160054_112160603_112160869_112161666_112161738_112163700_112163817_112164524_112164611_112166401_112166516_112168311_112168525_112168852_112168953_112172181_112172319_112172969_112173067_112173698_112173846_112175599_112175714_112177983_112178058_112180472_112180596_112181682_112181814_112182793_112182892_112183692
transcript_24855.known	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	10.259888211986	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	-26	True	NA	13	True	ATTAAA	-18	NA	112447214	112818744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
transcript_2486.known	chr1	-	1247	3	FSM	ENSG00000074800.16	ENST00000492343.2	1247	3	0	0	0	0	multi-exon	FALSE	canonical	3	15050	junction_1	76	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAATCACCGGTTCTCTT	-5	True	NA	NA	False	NA	NA	NA	8878692	8870946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8871987_8874823_8874918_8878579
transcript_24863.known	chr10	+	2423	3	FSM	ENSG00000151532.14	ENST00000483122.1	2423	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	1	True	NA	10	True	AATAAA	-18	NA	112446997	112450726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112447468_112448381_112448490_112448881
transcript_24865.known	chr10	+	1247	2	FSM	ENSG00000151532.14	ENST00000472892.1	1247	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATCGCTTGAACCTGG	2	True	NA	NA	False	NA	NA	NA	112446998	112449659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112447468_112448881
transcript_24877.known	chr10	-	1721	11	FSM	ENSG00000023041.12	ENST00000369404.3	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	56.0378443553997	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTCTGGTTAAGATGT	9	True	NA	-5	True	ACTAAA	-15	NA	112446901	112430723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443595_112445169_112445651_112446704
transcript_24882.known	chr10	-	3216	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	31.9652589192983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-4	True	NA	-18	True	AATAAA	-18	NA	112446950	112430304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_24885.nic	chr10	-	873	2	ISM	ENSG00000023041.12	ENST00000682839.1	2492	10	-2	13680	1	-13563	5prime_fragment	FALSE	canonical	3	202	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATTTAGGCTCGGAGAC	615	False	NA	92	True	NA	NA	NA	112446961	112445034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_112445651_112446704
transcript_24886.known	chr10	+	4237	1	FSM	ENSG00000260917.1	ENST00000564352.1	4237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTATTCCCATCTTTT	NA	False	NA	15	True	AATAAA	-16	NA	112823489	112827726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112823500_112827700
transcript_24887.known	chr10	+	2160	15	FSM	ENSG00000148737.17	ENST00000545257.6	2160	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	96.7328532503781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGTAGATGAGAGAAG	172	False	NA	NA	False	NA	NA	NA	112950663	113166160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113160618_113160692_113165554
transcript_24890.known	chr10	+	4000	14	FSM	ENSG00000148737.17	ENST00000538897.5	4000	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	83.7005793423709	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113165554
transcript_24894.known	chr10	+	3802	14	FSM	ENSG00000148737.17	ENST00000369397.8	3802	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	77.6142791718183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	96	False	NA	19	True	AATAAA	-25	NA	112950451	113167678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
transcript_24898.known	chr10	+	1979	13	FSM	ENSG00000148737.17	ENST00000355717.9	1979	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	87.195302816914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	94	False	NA	NA	False	NA	NA	NA	112950585	113165972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113089399_113089541_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_24899.nic	chr10	+	2607	13	NIC	ENSG00000148737.17	novel	4000	14	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	72.0016878660185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTTTGAAGCAGCCCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	112950219	113166324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113165554
transcript_2490.known	chr1	+	1025	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	0	9	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCATTGGTGGAATG	-35	True	NA	7	True	AATAAA	-20	NA	9182163	9192089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9182317_9183632_9183808_9191392
transcript_24900.known	chr10	+	3953	13	FSM	ENSG00000148737.17	ENST00000536810.5	3953	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	68.2511701161396	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
transcript_24902.known	chr10	+	1755	13	FSM	ENSG00000148737.17	ENST00000629706.2	1755	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	93.9105292286227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	65	False	NA	NA	False	NA	NA	NA	112950756	113165972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113160618_113160692_113165554
transcript_24904.nic	chr10	+	2541	12	NIC	ENSG00000148737.17	novel	3953	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_11	46.4284751611026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGCAAT	NA	False	NA	NA	False	ATTAAA	-5	NA	112950219	113166309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_24907.nic	chr10	+	3910	12	NIC	ENSG00000148737.17	novel	3953	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_11	46.4284751611026	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	NA	False	NA	19	True	AATAAA	-25	NA	112950219	113167678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_24914.nic	chr10	+	1379	9	ISM	ENSG00000148737.17	ENST00000352065.10	1553	15	-316	13854	94	0	5prime_fragment	FALSE	canonical	3	145	junction_3	33.0186973546807	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGCCCCACATAAAGAA	-12	True	NA	NA	False	AAAAAG	-13	NA	112950343	113151758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724
transcript_24920.nnic	chr10	+	1442	8	ISM	ENSG00000148737.17	ENST00000352065.10	1553	15	-413	14489	0	36	5prime_fragment	FALSE	canonical	3	145	junction_3	34.8665092802213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTTGCTGTTTTTCT	-10	True	NA	13	True	NA	NA	NA	112950246	113151123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997
transcript_24923.known	chr10	+	2467	7	FSM	ENSG00000165806.21	ENST00000621345.4	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.01387818865997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	-20	True	NA	17	True	ATTAAA	-25	NA	113679161	113730907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113679350_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_24925.known	chr10	+	2344	7	FSM	ENSG00000165806.21	ENST00000369318.8	2344	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.3879226322456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCAGTTTGCTTTCCT	-1	True	NA	15	True	ATTAAA	-23	NA	113679911	113730905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113679979_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_24927.known	chr10	-	4241	10	FSM	ENSG00000198924.8	ENST00000369305.1	4241	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	13.4412301024373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGGTGTCTTTTGT	9	True	NA	NA	False	AATAAA	-13	NA	113854383	113834728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722_113853848_113854353
transcript_24929.known	chr10	-	4450	9	FSM	ENSG00000198924.8	ENST00000361384.7	4450	9	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_6	9.21869703374615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTGTCTTTTGTTTTT	-1	True	NA	NA	False	AATAAA	-17	NA	113854082	113834724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722
transcript_24930.known	chr10	+	11051	11	FSM	ENSG00000196865.4	ENST00000369301.3	11051	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	35.6456168413453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTCTGTTTTAATGT	16	True	NA	17	True	ATTAAA	-17	NA	113854660	113917194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113855051_113858527_113858681_113876520_113876977_113879573_113879696_113884250_113884381_113898109_113898210_113901665_113901898_113902470_113902594_113903526_113903737_113904816_113905037_113908279
transcript_24939.known	chr10	+	552	2	FSM	ENSG00000196865.4	ENST00000468890.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGATAGTGGTTTGCCT	25	False	NA	NA	False	ATTAAA	-33	NA	113854823	113858852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113855051_113858527
transcript_24940.known	chr10	-	7343	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	14.2647949512077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTACTTATTAAATA	-22	True	NA	-44	True	TATAAA	-29	NA	114174232	114120900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
transcript_24953.nic	chr10	-	972	3	ISM	ENSG00000165813.20	ENST00000369287.8	7228	16	-32	36761	-3	3985	5prime_fragment	FALSE	canonical	3	39	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATTTAAGAGAAGAACT	-25	True	NA	NA	False	AAGAAA	-45	NA	114174235	114157622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_114157681_114162636_114163330_114174014
transcript_24954.known	chr10	-	2035	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	8	True	NA	-5	True	AATAAA	-22	NA	114174202	114161607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114163330_114173140_114173266_114174014
transcript_24956.known	chr10	-	1928	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-10	True	NA	-5	True	AATAAA	-22	NA	114174220	114161607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114163330_114174014
transcript_24958.known	chr10	-	7228	16	FSM	ENSG00000165813.20	ENST00000369287.8	7228	16	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_6	10.715720538847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAGTTTGATGGCATCT	7	True	NA	-5	True	ATTAAA	-22	NA	114174203	114120861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_24960.known	chr10	+	2875	12	FSM	ENSG00000165816.13	ENST00000298715.8	2875	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	4.24848052565379	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	77	False	NA	NA	False	NA	NA	NA	114239329	114289992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114239570_114248703_114248766_114253650_114253726_114254914_114255049_114261185_114261296_114272739_114272935_114277913_114278048_114278718_114278852_114282515_114282572_114284862_114284971_114285938_114286512_114288937
transcript_24963.nnic	chr10	-	2931	19	NNC	ENSG00000169129.15	novel	3722	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.46924847422786	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCTCAGTTCATGAAA	403	False	NA	-4	True	AATAAA	-19	NA	114404770	114294823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_114295010_114296977_114297101_114297219_114297414_114299259_114299416_114300193_114300363_114300444_114300691_114301353_114301466_114302338_114302485_114304718_114304931_114307804_114307910_114308432_114308518_114310353_114310444_114313870_114314051_114315559_114315766_114323170_114323262_114331802_114331898_114333220_114333296_114340602_114340732_114404439
transcript_24964.known	chr10	-	3964	19	FSM	ENSG00000169129.15	ENST00000369271.7	3964	19	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	7.96384577363053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCTCAGTTCATGAAA	417	False	NA	-4	True	AATAAA	-19	NA	114404756	114294823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114296069_114296977_114297101_114297231_114297414_114299259_114299416_114300193_114300363_114300444_114300691_114301353_114301466_114302338_114302485_114304718_114304931_114307804_114307910_114308432_114308518_114310353_114310444_114313870_114314051_114315559_114315766_114323170_114323262_114331802_114331898_114333220_114333296_114340602_114340732_114404439
transcript_24973.nic	chr10	-	2673	18	NIC	ENSG00000099204.21	novel	7560	23	NA	NA	-42	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	74.5993682543266	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCATGTCCTACTGA	NA	False	NA	NA	False	AAAAAG	-14	NA	114526973	114435343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114453378_114453484_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_24975.nic	chr10	-	2576	18	NIC	ENSG00000099204.21	novel	7560	23	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	74.5993682543266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	NA	False	NA	NA	False	AAGAAA	-14	NA	114526973	114435440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114453378_114453484_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_24978.nic	chr10	-	2568	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-42	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	64.2299336368955	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCATGTCCTACTGA	NA	False	NA	NA	False	AAAAAG	-14	NA	114526973	114435343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_2498.nnic	chr1	+	3534	5	NNC	ENSG00000049239.13	novel	9147	5	NA	NA	-63	-2229	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	6.32455532033676	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCAGAGATGAGCTCT	1033	False	NA	1	True	ATTAAA	-6	NA	9234710	9265669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_9235067_9244932_9245562_9246965_9247084_9262058_9262329_9263508
transcript_24983.nic	chr10	-	2471	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	64.2299336368955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	NA	False	NA	NA	False	AAGAAA	-14	NA	114526973	114435440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_24985.known	chr10	-	2255	16	FSM	ENSG00000099204.21	ENST00000369253.6	2255	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.4593550573436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	-14	True	NA	NA	False	AAGAAA	-14	NA	114526835	114435440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114487957_114488017_114491790_114491879_114526659
transcript_24987.nic	chr10	-	2373	16	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-1	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	76.1602404291257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCATGTCCTACTGA	-4	True	NA	NA	False	AAAAAG	-14	NA	114526919	114435343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_2499.nnic	chr1	+	6061	5	NNC	ENSG00000049239.13	novel	9147	5	NA	NA	0	361	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	6.32455532033676	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGTGATGACAACAG	-23	True	NA	NA	False	AAAACA	-39	NA	9234773	9268259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_9235067_9244932_9245562_9246965_9247084_9262058_9262329_9263508
transcript_24996.known	chr10	-	854	8	FSM	ENSG00000099204.21	ENST00000428430.1	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	68.7723247612092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCATCTACAAACAGCAT	-3	True	NA	NA	False	NA	NA	NA	114526918	114451644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526638
transcript_24997.nic	chr10	-	2109	8	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-42	-345	combination_of_known_junctions	FALSE	canonical	3	164	junction_5	23.6875925500319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATTAGGACGATGTGA	NA	False	NA	NA	False	AAAAAG	-12	NA	114526973	114450423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_25.known	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00071_+_0_600
transcript_2500.known	chr1	+	9147	5	FSM	ENSG00000049239.13	ENST00000377403.7	9147	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.64736790015417	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGCTTTAATTCTTTAT	-23	True	NA	15	True	AATAAA	-16	NA	9234773	9271337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9235067_9244924_9245562_9246965_9247084_9262058_9262329_9263508
transcript_25003.known	chr10	+	5774	17	FSM	ENSG00000151553.15	ENST00000369248.9	5774	17	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	12.424616442772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTATGTTTTTGTAAAA	-3	True	NA	NA	False	AATAAA	-20	NA	114821779	114864717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114822124_114830851_114830931_114833232_114833403_114835536_114835642_114836123_114836247_114842932_114843227_114843740_114843938_114845366_114845482_114846012_114846090_114846174_114846368_114846558_114846729_114847089_114847234_114848646_114848738_114855196_114855341_114860748_114860890_114861230_114861335_114861434
transcript_25009.known	chr10	+	666	3	FSM	ENSG00000151553.15	ENST00000369246.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGCCAAATACTTGA	-13	True	NA	NA	False	NA	NA	NA	114821769	114833465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114822124_114830851_114830931_114833232
transcript_25010.known	chr10	+	2870	17	FSM	ENSG00000151553.15	ENST00000369250.7	2870	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	23.7044794026361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTATTACTTTGGTTTTT	59	False	NA	NA	False	AATAAA	-29	NA	114821743	114899832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114822124_114830851_114830931_114833232_114833403_114835536_114835642_114836123_114836247_114842932_114843227_114843740_114843938_114845366_114845482_114846012_114846090_114846174_114846368_114846558_114846729_114847089_114847234_114848646_114848738_114855196_114855341_114860748_114860890_114861230_114861335_114899489
transcript_25011.known	chr10	+	3406	8	FSM	ENSG00000165832.6	ENST00000298746.5	3406	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	27.2801041352971	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCATGAGTTATTT	-26	True	NA	8	True	AATAAA	-20	NA	114938194	114977676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725_114959808_114970367_114970441_114972134_114972275_114974328_114974386_114975122
transcript_25013.known	chr10	+	1818	8	FSM	ENSG00000107518.18	ENST00000609571.5	1818	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	6.1145527311522	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTTATTTGAGATTG	12	True	NA	24	True	AATAAA	-25	NA	115093364	115171376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115165557_115165646_115171036
transcript_25015.known	chr10	+	1583	7	FSM	ENSG00000107518.18	ENST00000527407.5	1583	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	19.8277303009923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATGTTTTTCTCTTTA	7	True	NA	-25	True	NA	NA	NA	115093462	115171327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115171036
transcript_25016.nnic	chr10	+	1425	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	12.3209397188508	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	-4	True	NA	8	True	ATTAAA	-21	NA	116325460	116380029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_116325603_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_25019.known	chr10	-	5841	13	FSM	ENSG00000165868.16	ENST00000635765.1	5841	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	7.48888064622032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCAGATTTTTTTTC	-50	True	NA	0	True	AATAAA	-19	NA	116849741	116671191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683790_116683963_116692350_116692468_116698634_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116834934_116835023_116849565
transcript_25021.known	chr10	-	5714	12	FSM	ENSG00000165868.16	ENST00000369209.8	5714	12	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_11	6.3714238065219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCAGATTTTTTTTC	0	True	NA	0	True	AATAAA	-19	NA	116742566	116671191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683790_116683963_116692350_116692468_116698634_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116742429
transcript_25026.known	chr10	-	1452	5	FSM	ENSG00000165868.16	ENST00000481291.2	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	3.63145976158349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCTGCAGGGAGTGGG	0	True	NA	NA	False	NA	NA	NA	116742595	116697854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116742429
transcript_25029.nic	chr10	-	2662	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-67	1485	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	2907	False	NA	-31	True	AATAAA	-20	NA	116670331	116662210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_25030.nic	chr10	-	1177	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	2907	False	NA	-16	True	AATAAA	-18	NA	116670331	116663695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_25032.nic	chr10	-	3322	5	NIC	ENSG00000165863.17	novel	1529	5	NA	NA	-67	1485	intron_retention	FALSE	canonical	3	36	junction_1	24.2641711171019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	2907	False	NA	-31	True	AATAAA	-20	NA	116670331	116662210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116665827_116668257_116668324_116670080
transcript_25034.nic	chr10	-	1837	5	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-67	0	intron_retention	FALSE	canonical	3	36	junction_1	24.2641711171019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	2907	False	NA	-16	True	AATAAA	-18	NA	116670331	116663695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116665827_116668257_116668324_116670080
transcript_25035.nic	chr10	-	1747	5	NIC	ENSG00000165863.17	novel	1529	5	NA	NA	-67	0	intron_retention	FALSE	canonical	3	36	junction_1	24.2641711171019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	2907	False	NA	-1	True	AATAAA	-31	NA	116670331	116663785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116665827_116668257_116668324_116670080
transcript_25036.known	chr10	-	1791	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	3	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTTTTAGAATATA	5	True	NA	-1	True	AATAAA	-23	NA	116670264	116664285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116665827_116668257_116668324_116670080
transcript_25037.known	chr10	-	6871	17	FSM	ENSG00000187164.20	ENST00000355371.9	6871	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	10.7993055332276	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCAGTTTTTATATAC	-1	True	NA	NA	False	AATAAA	-19	NA	117005187	116881476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116886567_116901764_116901958_116906626_116906748_116911789_116911844_116915374_116915485_116921433_116921517_116927791_116927892_116929848_116930003_116940465_116940613_116944923_116945019_116948915_116948998_116951908_116952007_116954041_116954211_116960135_116960231_116968651_116968713_116979255_116979309_117005021
transcript_25044.known	chr10	+	3831	16	FSM	ENSG00000165646.14	ENST00000644641.2	3831	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	12.5793481548131	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCCTGTTTGTATTC	-4	True	NA	15	True	AATAAA	-15	NA	117241113	117279430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_117241221_117241678_117241815_117243970_117244314_117253398_117253458_117254047_117254132_117254404_117254498_117255276_117255367_117255478_117255523_117255596_117255658_117257796_117257893_117266732_117266812_117266983_117267036_117267672_117267737_117270070_117270191_117270329_117270464_117277161
transcript_2505.known	chr1	+	3106	3	FSM	ENSG00000171621.14	ENST00000328089.11	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0.5	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGAATTCCTCGTT	-1	True	NA	13	True	AATAAA	-24	NA	9292893	9369532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9293072_9355742_9356586_9367447
transcript_25053.known	chr10	-	9672	5	FSM	ENSG00000165650.12	ENST00000334464.7	9672	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	14.7478812037526	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATCTCAGTCACTTTCA	1	True	NA	NA	False	ATTAAA	-22	NA	117375440	117277273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_117285472_117290185_117290349_117318871_117318975_117340979_117341103_117374355
transcript_25059.nnic	chr10	+	2425	3	NNC	ENSG00000258114.1	novel	526	3	NA	NA	0	8360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAAGGGCGAACCAAAGC	-2	True	NA	NA	False	TTTAAA	-41	NA	117425193	117498779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_117425353_117436215_117436325_117496622
transcript_25060.known	chr10	-	6078	6	FSM	ENSG00000107560.12	ENST00000369199.5	6078	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	30.8480145228182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTATAGTTGATTAAAGT	-7	True	NA	-32	True	AATATA	-9	NA	118046592	118004947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118009226_118015064_118015111_118033981_118034042_118038971_118039441_118040122_118040566_118045810
transcript_25061.known	chr10	-	6399	5	FSM	ENSG00000107560.12	ENST00000355624.8	6399	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	10.7935165724615	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTGTCAACATTTATT	-5	True	NA	0	True	ATTAAA	-15	NA	118046941	118004915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118009226_118015064_118015111_118038971_118039441_118040122_118040566_118045810
transcript_25065.known	chr10	-	13898	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	63.7058670767458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAATTATTACTTTATTG	-13	True	NA	NA	False	AATAAA	-21	NA	118342324	118297924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
transcript_25068.known	chr10	-	872	8	FSM	ENSG00000165669.14	ENST00000369172.8	872	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	82.0592120710057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATTTGGGATTTTGA	-9	True	NA	-27	True	ACTAAA	-12	NA	118342320	118310745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_25077.known	chr10	-	11035	9	FSM	ENSG00000151893.15	ENST00000369151.8	11035	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	9.49670995661129	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGTTTTTGCTGAAT	17	True	NA	-2	True	AATAAA	-22	NA	118754970	118676410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118686169_118686597_118686642_118691264_118691404_118695140_118695231_118701305_118701409_118707491_118707588_118729294_118729398_118730283_118730411_118754395
transcript_25081.known	chr10	-	432	3	FSM	ENSG00000151893.15	ENST00000477583.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGGTGAATGTTGATCA	4971	False	NA	NA	False	TATAAA	-13	NA	118754477	118729174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118729398_118730283_118730411_118754395
transcript_25083.known	chr10	-	4495	23	FSM	ENSG00000107581.13	ENST00000541549.2	4495	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	209.513431787018	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAGAAAAACTAAAA	-12	True	NA	NA	False	NA	NA	NA	119080823	119035792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119035984_119036030_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_25085.known	chr10	-	6659	22	FSM	ENSG00000107581.13	ENST00000369144.8	6659	22	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_17	138.080229069422	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTCATCAAAGCTAA	-6	True	NA	-3	True	AATAAA	-18	NA	119080817	119033669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_25087.nic	chr10	-	3831	20	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-59	2548	-59	-2548	5prime_fragment	FALSE	canonical	3	608	junction_15	76.1835514924681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAGAGATAATCAAGAT	389	False	119080884	30	True	AAAAAG	-4	NA	119080882	119038340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_25089.nic	chr10	-	2756	17	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-59	14116	-59	6967	5prime_fragment	FALSE	canonical	3	608	junction_12	57.5290347889655	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAGAAGTGGAAAGGAA	389	False	119080884	-46	True	AAGAAA	-1	NA	119080882	119049908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_2509.known	chr1	+	3865	7	FSM	ENSG00000171612.7	ENST00000302692.7	3865	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_4	33.9628064538581	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATTTTAGTTTTCTGC	14	True	NA	NA	False	AATAAA	-16	NA	9539464	9585173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9539748_9553625_9553806_9567283_9567362_9570257_9570359_9573345_9573413_9579953_9580235_9582298
transcript_25092.nic	chr10	-	2636	16	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-59	14771	-59	6312	5prime_fragment	FALSE	canonical	3	608	junction_11	39.5386730514147	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGCAGAGAAG	389	False	119080884	12	True	NA	NA	NA	119080882	119050563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_25094.nic	chr10	-	2343	14	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-2	20949	-2	134	5prime_fragment	FALSE	canonical	3	608	junction_9	36.3539470684494	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTTTTTTATTTAAT	-14	True	NA	NA	False	ATTAAA	-35	NA	119080825	119056741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_25095.nic	chr10	-	2252	13	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-59	21179	-59	-96	5prime_fragment	FALSE	canonical	3	608	junction_8	37.4465359620293	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTCAAGAACGCCTAAA	389	False	119080884	NA	False	AAGAAA	-6	NA	119080882	119056971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_25098.nic	chr10	-	2109	12	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-59	22237	-59	-1154	5prime_fragment	FALSE	canonical	3	608	junction_7	36.9645798743778	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCGAGAGCGTTTGGAG	389	False	119080884	97	True	AAAAAG	-5	NA	119080882	119058029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_25115.known	chr10	+	2441	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	79.3579706141733	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	15	True	NA	10	True	AATAAA	-23	NA	119104112	119137984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_25119.nic	chr10	+	1745	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-46	15	intron_retention	TRUE	canonical	3	200	junction_1	88.9550448260243	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCCCGGCCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	119104039	119137195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_25120.nic	chr10	+	2259	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-46	-117	intron_retention	FALSE	canonical	3	200	junction_1	88.9550448260243	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGGGTCTTTCATCT	NA	False	NA	1	True	NA	NA	NA	119104039	119137709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_2513.nnic	chr1	+	1417	6	NIC	ENSG00000171612.7	novel	3865	7	NA	NA	-58	-2405	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	118.388512956283	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATACATTTGGCTTGTGTC	NA	False	NA	19	True	ATTAAA	-19	NA	9539406	9582768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_9539748_9553625_9553806_9567283_9567362_9573345_9573413_9579953_9580235_9582298
transcript_25132.known	chr10	+	992	2	FSM	ENSG00000119979.18	ENST00000472379.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTTGAACTCAGCAG	-12	True	NA	NA	False	AATAAA	-15	NA	119104085	119105643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119104198_119104763
transcript_25136.known	chr10	-	1556	14	FSM	ENSG00000183605.17	ENST00000355697.7	1556	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_11	26.8638909887093	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACCTTTGCCGCCCTC	-32	True	NA	NA	False	NA	NA	NA	119165714	119140766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_25140.known	chr10	-	1553	7	FSM	ENSG00000165672.7	ENST00000298510.4	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	4416	junction_4	207.105783491325	1119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTACCACCAGTA	-1	True	NA	-18	True	AATAAA	-15	NA	119178812	119167719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119168534_119169176_119169343_119172381_119172486_119173736_119173873_119174450_119174593_119177020_119177154_119178754
transcript_25152.known	chr10	-	923	5	FSM	ENSG00000148908.15	ENST00000369103.3	923	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	4.32290411644765	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCACACTACCTTTTAC	-11	True	NA	-25	True	ATTAAA	-26	NA	119542719	119499816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305_119527425_119542589
transcript_25162.known	chr10	-	2321	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	69.6696071947206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-4	True	NA	-28	True	AATAAA	-15	NA	119597029	119575411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_25164.nic	chr10	-	1995	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	74.7789334564815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	8	True	NA	-28	True	AATAAA	-15	NA	119597017	119575411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
transcript_25168.known	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	41.8872946673028	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-2	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_25169.known	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	52.134917155174	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	864	False	NA	-4	True	AATAAA	-19	NA	119596495	119571801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
transcript_25173.known	chr10	-	2222	11	FSM	ENSG00000151923.18	ENST00000489822.5	2222	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	43.8703772493467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-2	True	NA	-15	True	AATAAA	-28	NA	119596964	119575398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_25176.known	chr10	+	2561	4	FSM	ENSG00000151929.10	ENST00000369085.8	2561	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	11.1455023315337	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTGTGGTTTCTAAA	-2	True	NA	11	True	AATAAA	-20	NA	119651379	119677819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119651856_119669850_119670178_119672254_119672657_119676463
transcript_25177.known	chr10	+	4979	20	FSM	ENSG00000198825.15	ENST00000650623.2	4979	20	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_12	80.3126853231961	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	-8	True	NA	17	True	AATAAA	-23	NA	119726049	119829147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119726360_119751075_119751157_119781634_119781772_119791516_119791646_119791868_119792037_119792156_119792214_119796714_119796914_119797460_119797641_119798542_119798611_119804172_119804298_119805383_119805462_119806359_119806481_119807931_119808061_119810099_119810218_119811756_119811956_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_25178.known	chr10	+	3693	6	FSM	ENSG00000198825.15	ENST00000650409.1	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	30.2086080447279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	9	True	NA	17	True	AATAAA	-23	NA	119818726	119829147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_25179.known	chr10	+	874	5	FSM	ENSG00000198825.15	ENST00000369081.3	874	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	11.1214882097676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGAGATTGGTGTGA	24	False	NA	7	True	AATAAA	-15	NA	119726161	119792197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119726360_119751075_119751157_119781634_119781772_119791516_119791646_119791868
transcript_25182.known	chr10	-	4216	16	FSM	ENSG00000197771.13	ENST00000369077.4	4216	16	0	0	0	0	multi-exon	FALSE	canonical	2	341	junction_11	105.996855299265	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTAGAGTTTAAACGT	26	True	NA	0	True	NA	NA	NA	119872843	119829439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119831601_119832011_119832101_119835539_119835705_119836895_119837030_119838534_119838701_119840842_119840961_119842471_119842596_119843253_119843427_119847612_119847714_119849424_119849577_119853049_119853195_119857337_119857440_119858883_119858926_119859040_119859182_119859798_119859885_119872526
transcript_25185.nnic	chr10	-	2446	15	NIC	ENSG00000197771.13	novel	4216	16	NA	NA	-156	0	combination_of_known_splicesites	FALSE	canonical	2	74	junction_2	169.801024010758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTGCTGATTGTACC	574	False	NA	-17	True	ATTAAA	-13	NA	119872999	119831200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_119831601_119832011_119832101_119836895_119837030_119838534_119838701_119840842_119840961_119842471_119842596_119843253_119843427_119847612_119847714_119849424_119849577_119853049_119853195_119857337_119857440_119858883_119858926_119859040_119859182_119859798_119859885_119872526
transcript_25189.known	chr10	+	7148	19	FSM	ENSG00000107651.14	ENST00000369075.8	7148	19	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_8	33.9081912242273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTAGTGGTGCTTTT	-4	True	NA	NA	False	ATTAAA	-16	NA	119892729	119944657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
transcript_25193.nic	chr10	+	1550	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-11	39995	-11	0	5prime_fragment	FALSE	canonical	3	358	junction_1	6.64997911442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	-15	True	NA	12	True	AATAAA	-19	NA	119892718	119904662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
transcript_25195.known	chr10	+	285	2	FSM	ENSG00000107651.14	ENST00000470478.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAATAAGGAAGTATAATT	11	True	NA	NA	False	AAGAAA	-43	NA	119892744	119898327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119892946_119898243
transcript_25196.known	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	42	False	NA	NA	False	NA	NA	NA	120355183	120354700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_120354700_120355200
transcript_25198.known	chr10	+	3458	7	FSM	ENSG00000203805.11	ENST00000398250.6	3458	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	6.87184270936277	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTATTCCTCAACCCCTG	-10	True	NA	NA	False	ATTAAA	-16	NA	120457226	120592065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_120457362_120503817_120503927_120513910_120514002_120518832_120518897_120520970_120521096_120575130_120575302_120589302
transcript_252.nnic	chr1	-	2433	11	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-5159	297	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	95.8114815666682	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	200570	184919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262_195417_199836
transcript_25203.known	chr10	+	4545	29	FSM	ENSG00000120008.16	ENST00000263461.11	4545	29	0	0	0	0	multi-exon	TRUE	canonical	1	77	junction_28	33.6030815824492	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	-15	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
transcript_25211.known	chr10	-	4624	18	FSM	ENSG00000066468.24	ENST00000358487.10	4624	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	158.663928523571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	-14	True	NA	-1	True	AATAAA	-24	NA	121598444	121478331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
transcript_25212.known	chr10	-	3061	18	FSM	ENSG00000066468.24	ENST00000457416.6	3061	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	215.942674694756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTGTCTGCCTGTCC	27	True	NA	NA	False	CATAAA	-20	NA	121598403	121479856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
transcript_25223.known	chr10	-	4369	17	FSM	ENSG00000066468.24	ENST00000613048.4	4369	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	190.787799334758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	299	False	121598467	-3	True	AATAAA	-22	NA	121598458	121478333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
transcript_25229.known	chr10	-	3547	16	FSM	ENSG00000066468.24	ENST00000356226.8	3547	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	184.800673399446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTGATTTATTTGT	299	False	121598467	-103	True	AATATA	-19	NA	121598458	121479071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121593708_121593968_121597961
transcript_2523.known	chr1	+	3815	11	FSM	ENSG00000188807.13	ENST00000340381.11	3815	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	17.7527462664231	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCTGTCTGTATTC	17	True	NA	34	True	AAAAAG	-33	NA	9588910	9614877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068_9602273_9607556_9607790_9609839_9609912_9610505_9610806_9611752_9611891_9612985
transcript_25235.known	chr10	-	4895	12	FSM	ENSG00000107669.19	ENST00000369043.8	4895	12	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	47.0654546859306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGGTGGTCATTA	-17	True	NA	-5	True	AATAAA	-17	NA	121928031	121740423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_25236.known	chr10	-	4886	12	FSM	ENSG00000107669.19	ENST00000224652.12	4895	12	-9	18	2	-9	multi-exon	FALSE	canonical	3	95	junction_5	52.477622149315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	-26	True	NA	-23	True	GATAAA	-19	NA	121928040	121740441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121899865_121899995_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_25253.nic	chr10	-	1931	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	214.101284442667	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	6	True	NA	36	True	ATTAAA	-26	NA	121975189	121957090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974305
transcript_25254.nic	chr10	-	1477	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_10	210.257580124951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	2975	False	NA	36	True	ATTAAA	-26	NA	121974819	121957090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974389
transcript_25255.known	chr10	-	1391	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_10	46.5232200089375	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-22	True	NA	36	True	ATTAAA	-26	NA	121975217	121957090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
transcript_25269.nic	chr10	+	3837	16	NIC	ENSG00000138162.19	novel	3685	17	NA	NA	-239	0	intron_retention	FALSE	canonical	3	34	junction_1	42.2703468429373	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGCCTCGAATTTAT	33	False	NA	NA	False	AATAAA	-43	NA	122112790	122254542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122113234_122132608_122132735_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_25272.known	chr10	+	3979	16	FSM	ENSG00000138162.19	ENST00000360561.7	3979	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	54.7525341879259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCTCGAATTTATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	122163425	122254545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122163993_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122229345_122229487_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_25278.nnic	chr10	+	3675	15	NIC	ENSG00000138162.19	novel	3685	17	NA	NA	-203	0	intron_retention	FALSE	canonical	3	20	junction_1	39.2789604584169	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGCCTCGAATTTAT	69	False	NA	NA	False	AATAAA	-43	NA	122112826	122254542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122113234_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_25280.nic	chr10	+	3482	15	NIC	ENSG00000138162.19	novel	3979	16	NA	NA	20	-128	intron_retention	FALSE	canonical	3	78	junction_1	28.3484153536176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAAGGAGACTATCAGAA	NA	False	NA	20	True	AATAAA	-21	NA	122163445	122254209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122163993_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_25281.nic	chr10	+	3815	15	NIC	ENSG00000138162.19	novel	3979	16	NA	NA	20	0	intron_retention	FALSE	canonical	3	78	junction_1	28.3484153536176	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGCCTCGAATTTAT	NA	False	NA	NA	False	AATAAA	-43	NA	122163445	122254542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122163993_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_25290.nic	chr10	+	2396	3	ISM	ENSG00000138162.19	ENST00000369001.5	3685	17	-156	57584	-147	-13565	5prime_fragment	FALSE	canonical	3	34	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAATAAACTATGCTT	-14	True	NA	NA	False	AAAACA	-6	NA	122112882	122196958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_122113234_122132608_122132735_122195039
transcript_25293.nic	chr10	+	2478	2	ISM	ENSG00000138162.19	ENST00000360561.7	3979	16	20	57575	20	-13553	5prime_fragment	FALSE	canonical	3	78	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTGGCCGGGCATGG	NA	False	NA	NA	False	AATAAA	-1	NA	122163445	122196970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_122163993_122195039
transcript_25294.nnic	chr10	+	1847	14	NIC	ENSG00000107679.15	novel	3771	13	NA	NA	-183	-334	combination_of_known_splicesites	FALSE	canonical	3	31	junction_13	80.3487958471242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATATCTCAGTATCA	NA	False	NA	NA	False	AATATA	-32	NA	122374512	122430145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122428275_122428317_122429623
transcript_25297.nnic	chr10	+	1768	14	NIC	ENSG00000107679.15	novel	3872	12	NA	NA	0	-334	combination_of_known_splicesites	FALSE	canonical	3	13	junction_13	83.4542712185265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATATCTCAGTATCA	-30	True	NA	NA	False	AATATA	-32	NA	122374695	122430145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122428275_122428421_122429623
transcript_253.nnic	chr1	-	2006	11	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4945	297	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	97.0527691516321	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	200356	184919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262_195417_200049
transcript_25302.nnic	chr10	+	1806	13	NIC	ENSG00000107679.15	novel	3741	12	NA	NA	-183	-334	combination_of_known_splicesites	FALSE	canonical	3	124	junction_12	57.9215825251885	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATATCTCAGTATCA	NA	False	NA	NA	False	AATATA	-32	NA	122374512	122430145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_2531.nnic	chr1	+	3637	9	NIC	ENSG00000188807.13	novel	3815	11	NA	NA	-194	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_7	37.009289374426	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCTGTCTGTATTC	NA	False	NA	34	True	AAAAAG	-33	NA	9588716	9614877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068_9602273_9607556_9607790_9611752_9611891_9612985
transcript_25310.known	chr10	+	14010	12	FSM	ENSG00000107679.15	ENST00000368990.8	3741	12	-12	-10257	0	10248	multi-exon	FALSE	canonical	3	124	junction_11	57.0347146717326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCATGACTCGACTTTG	-30	True	NA	NA	False	AATAAA	-17	NA	122374695	122442602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122374807_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_25321.known	chr10	-	1976	8	FSM	ENSG00000138161.14	ENST00000368900.5	1976	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	43.8648201749374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	9716	False	NA	-11	True	AATAAA	-36	NA	122846175	122832157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122845761
transcript_25323.known	chr10	-	2125	8	FSM	ENSG00000138161.14	ENST00000368901.5	2125	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	28.7686053374373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	9716	False	NA	-11	True	AATAAA	-36	NA	122846175	122832157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122845761
transcript_25327.known	chr10	-	1958	9	FSM	ENSG00000138161.14	ENST00000392790.6	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	24.0022785376722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-1	True	NA	-11	True	AATAAA	-36	NA	122845857	122832157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122841177_122841329_122845761
transcript_25328.known	chr10	-	2991	6	FSM	ENSG00000119965.13	ENST00000368891.9	2991	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	47.7912125813941	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTCACGTATTG	20	False	NA	-4	True	AATAAA	-21	NA	122954311	122930902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122932662_122937704_122938160_122948648_122948856_122951953_122952027_122952828_122953029_122954014
transcript_2533.known	chr1	+	3851	6	FSM	ENSG00000188807.13	ENST00000340305.9	3851	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	10.590561835899	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTCAGGTGCCGCGTCT	28	True	NA	17	True	AATAAA	-28	NA	9588921	9604954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068
transcript_25330.known	chr10	+	1705	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	33.1934565171444	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122980039	122990390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_25333.known	chr10	+	1173	6	FSM	ENSG00000179988.15	ENST00000406217.8	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	22.1846793981793	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	-18	True	NA	13	True	ATTAAA	-17	NA	122980400	122990390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_25340.nic	chr10	+	839	5	NIC	ENSG00000179988.15	novel	818	5	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	37.4265948223987	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122954315	122990390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_25341.known	chr10	+	696	5	FSM	ENSG00000179988.15	ENST00000483455.5	696	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	42.8952211790544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATTGTACAGAAGTAT	76	False	NA	-42	True	NA	NA	NA	122980530	122990335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122980696_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_25342.known	chr10	-	4532	5	FSM	ENSG00000095574.12	ENST00000368886.10	4532	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	16.2230545829076	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTTTCTTTTTTGG	6	True	NA	-1	True	AATAAA	-21	NA	123008795	122990806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008693
transcript_25350.known	chr10	-	4542	5	FSM	ENSG00000095574.12	ENST00000617859.4	4542	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.3391869030599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGTTTTTCTTTTTTG	114	False	NA	-2	True	AATAAA	-20	NA	123008687	122990807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008574
transcript_25352.known	chr10	+	5848	11	FSM	ENSG00000196177.13	ENST00000358776.7	5848	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	14.208800090085	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGGTACTCTTATAA	9	True	NA	10	True	AATAAA	-18	NA	123009005	123058290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123009072_123034355_123034516_123037746_123037848_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_25358.known	chr10	+	2847	2	FSM	ENSG00000188620.11	ENST00000357878.7	2847	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTGCCAGAGTGTGTAA	-5	True	NA	NA	False	ATTAAA	-19	NA	123135969	123139423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123136451_123137057
transcript_25359.known	chr10	+	1614	2	FSM	ENSG00000188816.4	ENST00000339992.4	1614	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTAACTTTGGTGGGCT	-1	True	NA	4	True	AATAAA	-15	NA	123148135	123150672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123148647_123149569
transcript_25364.known	chr10	+	7703	8	FSM	ENSG00000154473.18	ENST00000368865.9	7703	8	0	0	0	0	multi-exon	TRUE	canonical	3	1279	junction_7	403.138908556141	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGCCTCATTTGTACC	14	True	NA	6	True	AATAAA	-13	NA	123154401	123170467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123163819
transcript_25368.known	chr10	+	1361	8	FSM	ENSG00000154473.18	ENST00000368858.9	1361	8	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_7	515.023835390565	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATGTTTTTGAATGT	-8	True	NA	30	True	AATAAA	-21	NA	123154414	123165365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123165046
transcript_25378.known	chr10	-	3544	14	FSM	ENSG00000121898.13	ENST00000241305.4	3544	14	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_8	2.16753889286236	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTGTGTGTGACTTT	-17	True	NA	-3	True	AATAAA	-16	NA	123891807	123745638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_123747018_123754662_123754763_123757212_123757353_123761871_123762170_123766972_123767153_123768525_123768723_123770915_123771040_123780166_123780256_123797975_123798127_123799114_123799200_123842348_123842489_123862613_123862724_123880210_123880310_123891355
transcript_25380.known	chr10	-	4810	8	FSM	ENSG00000182022.18	ENST00000346248.7	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	14.2313250347569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTGGTGCATGAGT	1234	False	NA	-3	True	NA	NA	NA	124092454	124007667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124092323
transcript_25382.known	chr10	-	4809	8	FSM	ENSG00000182022.18	ENST00000435907.6	4809	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	10.889050857234	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTGGTGCATGAGT	-1	True	NA	-3	True	NA	NA	NA	124093598	124007667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124093468
transcript_25395.known	chr10	-	2039	10	FSM	ENSG00000065154.12	ENST00000368845.6	2039	10	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_4	37.9320379912923	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-1	True	NA	-1	True	AATAAA	-19	NA	124418923	124397302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124411972_124412201_124418872
transcript_25397.known	chr10	-	1864	9	FSM	ENSG00000065154.12	ENST00000539214.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	241.381829266414	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	1398	False	NA	-1	True	AATAAA	-19	NA	124418976	124397302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124418872
transcript_25400.known	chr10	-	3211	2	FSM	ENSG00000229544.9	ENST00000451024.5	3211	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTATTTCTTGTCT	0	True	NA	-23	True	AATAAA	-17	NA	124450035	124445242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124448148_124449729
transcript_25404.nic	chr10	+	2177	8	NIC	ENSG00000107902.14	novel	1634	7	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	108.40362973063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCACTGTGCTCTCT	NA	False	NA	NA	False	TATAAA	-24	NA	124461791	124617888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179_124517272_124613263_124613303_124616537
transcript_25405.known	chr10	+	1634	7	FSM	ENSG00000107902.14	ENST00000368842.10	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	63.0740305778324	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	-12	True	NA	9	True	AGTAAA	-18	NA	124461822	124614141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179_124517272_124613263
transcript_25407.known	chr10	+	840	6	FSM	ENSG00000107902.14	ENST00000392757.8	840	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	106.295813652279	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGACTATTTTGGGA	-1	True	NA	9	True	AATAAA	-22	NA	124461833	124498514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124498327
transcript_25409.nnic	chr10	+	2543	6	NNC	ENSG00000107902.14	novel	840	6	NA	NA	-31	-6050	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	121.995081868082	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTCCTTGCTCTGCCT	NA	False	NA	96	True	AATAAA	-22	NA	124461791	124511326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124509478
transcript_2541.known	chr1	+	5412	24	FSM	ENSG00000171608.17	ENST00000377346.9	5412	24	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	15.5659460601848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAGGACATCCCCTGGG	-9	True	NA	NA	False	NA	NA	NA	9651730	9729114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9651803_9691466_9691572_9710423_9710597_9715540_9715770_9715848_9716079_9716439_9716620_9716958_9717109_9717536_9717627_9718693_9718916_9719920_9720018_9720111_9720243_9720610_9720662_9720741_9720910_9721126_9721249_9721443_9721588_9721760_9721861_9721974_9722154_9722243_9722357_9722527_9722607_9723124_9723293_9723968_9724093_9724275_9724422_9724803_9724937_9726908
transcript_25411.nnic	chr10	+	2025	6	NNC	ENSG00000107902.14	novel	1522	6	NA	NA	0	-6050	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	123.569251838797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTCCTTGCTCTGCCT	8	True	NA	96	True	AATAAA	-22	NA	124461842	124511326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124509945
transcript_25413.known	chr10	+	1522	6	FSM	ENSG00000107902.14	ENST00000368839.1	1522	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	113.742516237333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	8	True	NA	9	True	AGTAAA	-18	NA	124461842	124614141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124613263
transcript_25429.known	chr10	-	5759	5	FSM	ENSG00000189319.14	ENST00000337318.8	5759	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	9.65660395791398	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGGTGCCAGCTGTGT	-2	True	NA	-2	True	AATAAA	-22	NA	124744378	124619291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124623605_124681606_124682380_124696157_124696213_124706635_124706888_124744012
transcript_25435.known	chr10	-	3599	7	FSM	ENSG00000203791.15	ENST00000368836.7	3599	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	129.218161778186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATTGTCCTTGAATG	-31	True	NA	NA	False	ACTAAA	-16	NA	124791887	124757833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791723
transcript_25442.known	chr10	-	1013	6	FSM	ENSG00000203791.15	ENST00000464099.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	138.330618447255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	-12	True	NA	-21	True	ATTAAA	-15	NA	124791868	124760145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124760504_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
transcript_25452.known	chr10	+	2955	9	FSM	ENSG00000165660.8	ENST00000298492.6	2955	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	12.854352375752	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTGTTTTAATGTCT	5	True	NA	15	True	AATAAA	-18	NA	124801818	124836667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348_124831464_124834501
transcript_25469.known	chr10	-	1918	11	FSM	ENSG00000175029.17	ENST00000531469.5	1918	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	240.460412542273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	0	True	NA	-40	True	AATAAA	-18	NA	125158716	124989224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125158634
transcript_2547.nnic	chr1	+	5331	24	NNC	ENSG00000171608.17	novel	539	3	NA	NA	1366	-189	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	13.6219549241154	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTATGTTCTTTTAT	-9	True	NA	NA	False	AGTAAA	-23	NA	9689541	9728925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_9689722_9691466_9691572_9710423_9710597_9715540_9715770_9715848_9716079_9716439_9716620_9716958_9717109_9717536_9717627_9718693_9718916_9719920_9720018_9720111_9720243_9720610_9720662_9720741_9720910_9721126_9721249_9721443_9721588_9721760_9721861_9721974_9722154_9722243_9722357_9722527_9722607_9723124_9723293_9723968_9724093_9724275_9724422_9724803_9724937_9726908
transcript_25470.known	chr10	-	6939	11	FSM	ENSG00000175029.17	ENST00000337195.9	6939	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_10	197.400709218584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTTTCTGAAAGAGC	547	False	NA	-1	True	AATAAA	-22	NA	125160513	124984316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318
transcript_25471.known	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	225.446246364849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	6	True	NA	-40	True	AATAAA	-18	NA	125161026	124989224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
transcript_25482.known	chr10	-	2014	11	FSM	ENSG00000175029.17	ENST00000494626.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	285.692492025954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	561	False	NA	-40	True	AATAAA	-18	NA	125160499	124989224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125133511_125133613_125160318
transcript_25496.nic	chr10	-	2895	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	-78	800	combination_of_known_junctions	FALSE	canonical	3	172	junction_9	189.323943429128	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTTCTGAAATTCAAG	469	False	NA	-36	True	AATAAA	-16	NA	125160591	124988334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318
transcript_25506.nic	chr10	-	2347	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	-78	252	combination_of_known_junctions	FALSE	canonical	3	172	junction_9	189.323943429128	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	469	False	NA	21	True	AGTAAA	-32	NA	125160591	124988882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318
transcript_25507.nnic	chr10	-	2320	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	-11	252	combination_of_known_splicesites	FALSE	canonical	3	69	junction_9	217.90200538457	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	NA	False	NA	21	True	AGTAAA	-32	NA	125161072	124988882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
transcript_25541.known	chr10	+	4483	25	FSM	ENSG00000107938.18	ENST00000356792.9	4483	25	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_6	20.3463073362766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	-8	True	NA	15	True	AATAAA	-19	NA	125719708	125764139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729002_125729105_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_25543.nic	chr10	+	487	3	ISM	ENSG00000107938.18	ENST00000525091.5	4211	20	3	25962	2	-12615	5prime_fragment	FALSE	canonical	3	128	junction_2	10	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTATTTGTCGCTT	-12	True	NA	NA	False	NA	NA	NA	125719704	125723134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_125719916_125721203_125721413_125723067
transcript_25544.known	chr10	-	718	3	FSM	ENSG00000224023.10	ENST00000528844.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	NA	False	NA	-10	True	NA	NA	NA	125719546	125707236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125707760_125709497_125709568_125719421
transcript_25559.nic	chr10	-	1458	11	NIC	ENSG00000188690.15	novel	1695	13	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	156.071265773044	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	NA	False	NA	-13	True	AATAAA	-19	NA	125823299	125788585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125789006_125789282_125789364_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25560.nic	chr10	-	1623	11	NIC	ENSG00000188690.15	novel	1695	13	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	157.124186553185	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	NA	False	NA	-13	True	AATAAA	-19	NA	125823299	125788585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125789006_125789282_125789529_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25565.known	chr10	-	1472	11	FSM	ENSG00000188690.15	ENST00000648119.1	1472	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	167.476684944502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTAGAGAGAGGCCGGG	2	True	NA	NA	False	AAGAAA	-27	NA	125823211	125793857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125794389_125794879_125794979_125796102_125796189_125796789_125796862_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25566.known	chr10	-	1279	10	FSM	ENSG00000188690.15	ENST00000649536.1	1279	10	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	160.854968800017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	82	False	NA	-13	True	AATAAA	-19	NA	125823201	125788585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125789006_125789282_125789364_125794879_125794979_125796102_125796189_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25570.known	chr10	-	1336	10	FSM	ENSG00000188690.15	ENST00000368797.10	1336	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	117.840235011877	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	-14	True	NA	-13	True	AATAAA	-19	NA	125823258	125788585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125789006_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25572.nic	chr10	-	1818	10	NIC	ENSG00000188690.15	novel	1472	11	NA	NA	-41	330	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	152.847055000161	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAGATAGGACCCATA	NA	False	NA	NA	False	CATAAA	-26	NA	125823299	125793527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125794389_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25574.nic	chr10	-	1296	9	NIC	ENSG00000188690.15	novel	1336	10	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	118.502900808377	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	NA	False	NA	-13	True	AATAAA	-19	NA	125823299	125788585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125789006_125794879_125794979_125796102_125796189_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25579.known	chr10	-	1556	7	FSM	ENSG00000188690.15	ENST00000368778.7	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	128.968665445009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGTGGGATTAAGT	87	False	NA	-1	True	AATAAA	-20	NA	125823196	125802056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125803025_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_25586.nic	chr10	-	3114	12	NIC	ENSG00000089876.12	novel	3050	11	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_8	20.1170130704345	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTGAGTTTTCTGGT	-29	True	NA	NA	False	AATAAA	-20	NA	125896502	125836336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960_125854204_125859602_125859976_125866989_125867184_125880542_125881072_125896217
transcript_25590.known	chr10	+	1433	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_7	457.269446758446	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	-4	True	NA	7	True	ATTAAA	-18	NA	125823545	125853695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
transcript_25593.known	chr10	+	1234	7	FSM	ENSG00000107949.17	ENST00000278100.11	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_6	309.363324695521	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGTTATTTTCT	-4	True	NA	NA	False	AATAAA	-27	NA	125823545	125836551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125836103
transcript_25594.known	chr10	+	2337	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_6	358.570619109945	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	-4	True	NA	15	True	AATAAA	-20	NA	125823545	125842805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
transcript_25598.nic	chr10	+	765	6	ISM	ENSG00000107949.17	ENST00000278100.11	1234	7	-24	2650	-24	2251	5prime_fragment	FALSE	canonical	3	1495	junction_1	62.2157536320183	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCGTTAATGTTTGCAAA	NA	False	NA	NA	False	AAAAAG	-22	NA	125823521	125833901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771
transcript_25605.known	chr10	-	3050	11	FSM	ENSG00000089876.12	ENST00000284690.4	3050	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	17.8706463229509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTGAGTTTTCTGGT	-2	True	NA	NA	False	AATAAA	-20	NA	125881292	125836336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960_125854204_125859602_125859976_125866989_125867184_125880542
transcript_25607.known	chr10	+	1271	11	FSM	ENSG00000203780.12	ENST00000368693.6	1271	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	6.87386354243376	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	-14	True	NA	14	True	AATACA	-14	NA	125896563	126009592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_25609.known	chr10	+	6840	52	FSM	ENSG00000150760.13	ENST00000623213.2	6840	52	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	21.2726573694283	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGTGTCTGACCAATT	-13	True	NA	16	True	AATAAA	-17	NA	126905427	127452516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012231_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026_127439226_127444125_127444280_127447393_127447546_127451331
transcript_25610.known	chr10	+	6797	52	FSM	ENSG00000150760.13	ENST00000280333.9	6797	52	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_40	17.3989972621576	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGTCTGACCAATTA	NA	False	NA	17	True	AATAAA	-18	NA	126905408	127452517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012294_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026_127439226_127444125_127444280_127447393_127447546_127451331
transcript_2562.known	chr1	-	4647	18	FSM	ENSG00000171603.18	ENST00000361311.4	4647	18	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_8	128.196135413468	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGCCGGAGCGGGGT	631	False	NA	-21	True	AATAAA	-16	NA	9823984	9729027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
transcript_25621.known	chr10	-	2435	1	FSM	ENSG00000279725.1	ENST00000623953.1	2435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTGCCATGGATAT	NA	False	NA	NA	False	AATGAA	-43	NA	127736996	127734561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_127734600_127737000
transcript_25622.known	chr10	+	3264	2	FSM	ENSG00000186766.8	ENST00000388920.5	3264	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTGGCATGTGTATGC	1	True	NA	NA	False	AATAAA	-16	NA	127737184	127741183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_127737785_127738519
transcript_25623.nic	chr10	-	3287	13	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	-51	12359	-51	2502	5prime_fragment	FALSE	canonical	3	121	junction_7	20.6471682212248	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGATGAAAAGATGAAAGCAA	-1	True	NA	17	True	ATTAAA	-7	NA	128126474	128109017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128114927_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_25626.nic	chr10	-	1232	7	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	-51	18982	-51	-131	5prime_fragment	FALSE	canonical	3	121	junction_1	18.0616229121921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTACAGTATTGTAGAA	-1	True	NA	NA	False	AAAAAG	-5	NA	128126474	128115640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_25627.nic	chr10	-	1163	7	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	-51	19051	-51	-200	5prime_fragment	FALSE	canonical	3	121	junction_1	18.0616229121921	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTCCCTTTTGGAAGC	-1	True	NA	NA	False	NA	NA	NA	128126474	128115709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_25630.nic	chr10	-	808	5	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	-51	22605	-51	-3754	5prime_fragment	FALSE	canonical	3	131	junction_3	11.6484977572217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGTGAACAGGTGATAGAA	-1	True	NA	NA	False	AAGAAA	-3	NA	128126474	128119263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_25631.known	chr10	-	654	4	FSM	ENSG00000148773.14	ENST00000478293.1	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	59.9054811070462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGCTGTGGCAGAGCCT	257	False	NA	NA	False	NA	NA	NA	128126235	128115509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_128116008_128116490_128116537_128119252_128119320_128126192
transcript_25638.known	chr10	+	4678	5	FSM	ENSG00000170430.10	ENST00000651593.1	4678	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	4.14578098794425	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTCACATCAGTTT	-5	True	NA	NA	False	ATTAAA	-17	NA	129467240	129770983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_129467297_129536240_129536378_129707894_129708044_129759201_129759342_129766787
transcript_25640.known	chr10	+	959	2	FSM	ENSG00000170430.10	ENST00000482547.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCACTCCTATGCTTGGT	16	False	NA	NA	False	AAGAAA	-8	NA	129467261	129537164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_129467297_129536240
transcript_25641.known	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-8	True	NA	-8	True	ATTAAA	-23	NA	130110830	130063895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
transcript_25645.known	chr10	+	3827	12	FSM	ENSG00000108010.12	ENST00000368644.5	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_11	468.067364650901	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTTGCCTTTTTTTG	-3	True	NA	27	True	NA	NA	NA	130136398	130182881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112
transcript_25648.known	chr10	+	1318	11	FSM	ENSG00000108010.12	ENST00000331244.10	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	1623	junction_4	143.855517794765	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAATCTCTTTTTCTTA	-11	True	NA	12	True	ATTAAA	-25	NA	130136390	130179672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341
transcript_25655.known	chr10	+	317	2	FSM	ENSG00000108010.12	ENST00000496195.1	317	2	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCCTCCTATTGAGA	NA	False	NA	13	True	AATAAA	-24	NA	130179373	130180382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_130179421_130180112
transcript_25656.known	chr10	-	2618	12	FSM	ENSG00000176769.9	ENST00000368642.4	2618	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	6.8947219003122	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTATGTGTGACTAAG	-13	True	NA	-7	True	AATAAA	-14	NA	131311721	131092390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_131093319_131098305_131098425_131104264_131104355_131116798_131116935_131134378_131134449_131146505_131146661_131163121_131163211_131166796_131166886_131260258_131260445_131308210_131308392_131309152_131309300_131311293
transcript_25662.known	chr10	+	1535	2	FSM	ENSG00000283095.1	ENST00000634373.1	1535	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCGGAAAAGCACCTTGG	NA	False	NA	NA	False	NA	NA	NA	131891639	131895297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_131892990_131895112
transcript_25664.known	chr10	+	5374	9	FSM	ENSG00000175470.20	ENST00000455566.6	5374	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	30.5859444843542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTGCGTATTTGGAC	-1	True	NA	9	True	AATAAA	-20	NA	131901007	131959834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_131901156_131901237_131901331_131934457_131934556_131940030_131940197_131940581_131940695_131943967_131944146_131945294_131945460_131947529_131947792_131955683
transcript_25668.nnic	chr10	+	2044	8	NIC	ENSG00000175470.20	novel	5374	9	NA	NA	-47	0	intron_retention	FALSE	canonical	3	78	junction_2	68.1469001496033	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTCTTTTTATTTAAT	-12	True	NA	36	True	AATAAA	-39	NA	131900960	131956555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_131901156_131901237_131901331_131940030_131940197_131940581_131940695_131943967_131944146_131945294_131945460_131947529_131947792_131955683
transcript_25671.nic	chr10	+	743	4	ISM	ENSG00000175470.20	ENST00000455566.6	5374	9	-310	19710	-310	-3882	5prime_fragment	FALSE	canonical	3	203	junction_3	32.2937902527543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAGGAAAAAATTAATAAA	3	True	NA	NA	False	NA	NA	NA	131900697	131940124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_131901156_131901237_131901331_131934457_131934556_131940030
transcript_25672.known	chr10	-	1062	6	FSM	ENSG00000176171.12	ENST00000633835.2	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	382.462233429655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTGGCCAGAGGGCTCA	2	True	NA	NA	False	NA	NA	NA	131981967	131969649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_131970012_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_25673.known	chr10	-	2861	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	-90	-1229	-46	1229	multi-exon	FALSE	canonical	3	799	junction_1	100.547302300957	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCGTATCTGAATG	-2	True	NA	-11	True	ATTAAA	-17	NA	131982013	131966454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_25677.known	chr10	-	3066	5	FSM	ENSG00000176171.12	ENST00000540159.4	3066	5	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_4	94.0329064742763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTCATGATGTGTGTTG	-1	True	NA	-119	True	TATAAA	-27	NA	131981923	131968227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_25683.nic	chr10	+	2970	15	NIC	ENSG00000151640.13	novel	2664	14	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	13.1010593122099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	1030	False	NA	23	True	ATTAAA	-17	NA	132186879	132205759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_132187103_132190746_132190836_132192282_132192521_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_25686.known	chr10	+	2664	14	FSM	ENSG00000151640.13	ENST00000338492.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	5.38351637136083	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	-6	True	NA	23	True	ATTAAA	-17	NA	132186947	132205759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_25691.nic	chr10	+	2552	13	NIC	ENSG00000151640.13	novel	2664	14	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	10.6052921799554	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	1030	False	NA	23	True	ATTAAA	-17	NA	132186879	132205759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132203761_132203928_132204838
transcript_25698.known	chr10	-	1866	13	FSM	ENSG00000165752.17	ENST00000462160.5	1866	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.6465297368808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	NA	False	NA	-9	True	NA	NA	NA	132249108	132207491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132208152_132209033_132209102_132209294_132209365_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_257.nnic	chr1	-	1576	10	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4469	297	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_4	98.9264597791938	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	-8	True	NA	NA	False	AATAAA	-15	NA	199880	184919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188890_199836
transcript_25701.nic	chr10	-	1798	12	NIC	ENSG00000165752.17	novel	1866	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	11.9475437497794	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	NA	False	NA	-9	True	NA	NA	NA	132249110	132207491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_132208152_132209033_132209102_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_25702.known	chr10	-	2096	12	FSM	ENSG00000165752.17	ENST00000298630.8	2096	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	8.58212634269523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	7	True	NA	-9	True	NA	NA	NA	132307950	132207491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132208152_132209033_132209102_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132307571
transcript_25707.known	chr10	-	733	2	FSM	ENSG00000165752.17	ENST00000368619.3	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGAGATTAATGCTGC	10	True	NA	NA	False	NA	NA	NA	132331831	132324036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132324374_132331435
transcript_25709.known	chr10	-	607	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTTGCTTGTTATTG	4	True	NA	1	True	AATAAA	-25	NA	132331837	132330280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132330486_132331435
transcript_2571.nic	chr1	-	4572	17	NIC	ENSG00000171603.18	novel	4760	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	282	junction_8	80.7310349246187	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGCCGGAGCGGGGTT	1	True	NA	-20	True	AATAAA	-17	NA	9823965	9729026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
transcript_25710.nnic	chr10	-	576	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	-15	-10	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCGTATTCCCTCTTG	688	False	132331881	-9	True	AATAAA	-15	NA	132331862	132330290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_132330486_132331481
transcript_25713.known	chr10	+	7971	11	FSM	ENSG00000148814.18	ENST00000368614.8	7971	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	7.863841300535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATCCTATTCTGTCCT	14	True	NA	NA	False	AATAAA	-17	NA	132332192	132381508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
transcript_25714.known	chr10	+	2113	11	FSM	ENSG00000148814.18	ENST00000368613.8	2113	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9.10823802938856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGTGGTCTCGCCTTCC	-4	True	NA	11	True	ATTAAA	-16	NA	132332278	132375456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132332537_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
transcript_25716.known	chr10	+	1809	9	FSM	ENSG00000148814.18	ENST00000344079.9	1809	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	9.92156741649221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTTGTGTGTGTGCTG	-25	True	NA	4	True	AATAAA	-14	NA	132332153	132353395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132348962_132349058_132351606_132351754_132352905
transcript_25725.known	chr10	+	2013	3	FSM	ENSG00000171813.14	ENST00000631148.2	2013	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	20	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTCAGAAAAACCCAAT	NA	False	NA	NA	False	NA	NA	NA	132397167	132417528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132397352_132404625_132405987_132417060
transcript_25726.known	chr10	+	2615	3	FSM	ENSG00000171813.14	ENST00000305233.6	2615	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	-18	True	NA	63	True	AATAAA	-18	NA	132397199	132417859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132397352_132404625_132406290_132417060
transcript_25729.known	chr10	-	2768	3	FSM	ENSG00000148826.9	ENST00000368592.8	2768	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTCTAATCACCTTC	0	True	NA	NA	False	AATAAA	-23	NA	132786147	132783180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132785171_132785279_132785453_132785542
transcript_25740.known	chr10	-	1156	6	FSM	ENSG00000171811.14	ENST00000475340.1	1156	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.88767014308903	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTCTACCGAATTG	19	True	NA	-11	True	AATAAA	-15	NA	132942543	132937114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_25745.known	chr10	-	3236	1	FSM	ENSG00000256925.3	ENST00000366099.2	3236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAGATAAGAC	NA	False	NA	NA	False	NA	NA	NA	133088491	133085255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133085300_133088500
transcript_25747.known	chr10	+	7021	30	FSM	ENSG00000171798.19	ENST00000304613.8	7021	30	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_14	8.27787331882536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTGTGGTCACTCT	-8	True	NA	9	True	AATAAA	-16	NA	133160218	133226412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133183343_133183491_133183871_133183990_133185973_133186675_133188538_133188654_133189597_133189670_133189751_133189814_133195662_133195822_133197057_133197136_133197674_133197769_133198336_133198500_133198577_133199267_133199457_133199603_133200374_133200461_133201500_133201899_133206684_133206779_133206855_133206954_133207136_133207352_133210610_133210725_133211421_133211570_133211678_133211859_133212715_133212923_133213644_133213728_133213971_133214123_133218830_133218954_133219030_133219091_133219954_133220113_133224658
transcript_25752.nic	chr10	+	1736	6	ISM	ENSG00000171798.19	ENST00000368571.3	6200	17	-267	17894	-18	-1836	5prime_fragment	FALSE	canonical	3	33	junction_3	11.4786758818254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCCGTTTCTGAAGGA	-26	True	NA	15	True	ATTAAA	-15	NA	133160200	133186817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_133160570_133167380_133167580_133168253_133168313_133183343_133183491_133183871_133183990_133185973
transcript_25753.known	chr10	+	2310	4	FSM	ENSG00000171798.19	ENST00000683144.1	2310	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	25.7207222984806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTAAGAGCGTTTGCT	-5	True	NA	-66	True	AAAAAG	-8	NA	133160432	133170541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133168626
transcript_25754.known	chr10	+	1966	4	FSM	ENSG00000171798.19	ENST00000683259.1	1966	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	23.3666428910958	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTGGTCTCATTCA	3	True	NA	10	True	ATTAAA	-19	NA	133160440	133180840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133179261
transcript_25755.known	chr10	+	6659	3	FSM	ENSG00000171798.19	ENST00000684739.1	6659	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGATTATTGATGATGG	-26	True	NA	NA	False	AATAAA	-17	NA	133160411	133174555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253
transcript_25756.known	chr10	+	1214	2	FSM	ENSG00000171794.4	ENST00000304477.3	1214	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGGCTGTGTAGGAGTG	5	True	NA	17	True	AATAAA	-18	NA	133230216	133231558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133230839_133230966
transcript_25757.known	chr10	+	2459	3	FSM	ENSG00000151650.8	ENST00000325980.10	2459	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCGTGGAGATTGCTTT	-2	True	NA	6	True	GATAAA	-18	NA	133237854	133241928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133238156_133239675_133239837_133239931
transcript_25758.known	chr10	-	3259	23	FSM	ENSG00000151651.16	ENST00000445355.8	3259	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	4.11206650105405	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTAGATTCTTGTTAGA	0	True	NA	-6	True	AATAAA	-13	NA	133276868	133262422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133263234_133263687_133263766_133267351_133267418_133267928_133268119_133268747_133268863_133269444_133269530_133269896_133269975_133270359_133270511_133270735_133270806_133270880_133271071_133271199_133271290_133271527_133271706_133271805_133271955_133272192_133272275_133272415_133272586_133272797_133272867_133272956_133273020_133273253_133273444_133273761_133273839_133273950_133274030_133274158_133274236_133275483_133275588_133276771
transcript_25759.known	chr10	-	3077	22	FSM	ENSG00000151651.16	ENST00000415217.7	3077	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	4.76428511934505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGATTCTTGTTAGATCA	2186	False	NA	-3	True	AATAAA	-16	NA	133276850	133262419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133263234_133263687_133263766_133267351_133267418_133267928_133268067_133269444_133269530_133269896_133269975_133270359_133270511_133270735_133270806_133270880_133271071_133271199_133271290_133271527_133271706_133271805_133271955_133272192_133272275_133272415_133272586_133272797_133272867_133272956_133273020_133273253_133273444_133273761_133273839_133273950_133274030_133274158_133274236_133275483_133275588_133276771
transcript_25772.known	chr10	-	3927	18	FSM	ENSG00000130640.15	ENST00000684487.1	3927	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	54.7177090315457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCACAAACCGCTTC	188	False	NA	-79	True	GGGGCT	-45	NA	133308977	133278710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288279_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_25778.known	chr10	-	3896	18	FSM	ENSG00000130640.15	ENST00000682905.1	3896	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_16	55.7970246382144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	19	True	NA	-43	True	NA	NA	NA	133308846	133278674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302758_133302981_133308822
transcript_25779.known	chr10	-	3838	18	FSM	ENSG00000130640.15	ENST00000682515.1	3838	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_17	58.3344966105793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	15	True	NA	-43	True	NA	NA	NA	133308850	133278674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302952_133308822
transcript_2578.known	chr1	-	939	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	21	18	-21	multi-exon	FALSE	canonical	1	1	junction_1	40.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGCATTTCTCATCCTA	16	True	NA	-21	True	AATAAA	-12	NA	9687555	9672425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9672720_9680711_9681136_9687334
transcript_25780.known	chr10	-	3876	18	FSM	ENSG00000130640.15	ENST00000683786.1	3876	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	58.5599388318171	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	-7	True	NA	-43	True	NA	NA	NA	133308872	133278674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300101_133302791_133302981_133308822
transcript_25781.known	chr10	-	3928	18	FSM	ENSG00000130640.15	ENST00000683612.1	3928	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	59.1937175194431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAACACATTTATCAGC	8	True	NA	-25	True	NA	NA	NA	133308857	133278656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133303017_133308822
transcript_25789.known	chr10	-	4052	18	FSM	ENSG00000130640.15	ENST00000682990.1	4052	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	57.9010610608503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	188	False	NA	NA	False	NA	NA	NA	133308977	133279286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133282107_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_25793.known	chr10	-	2749	17	FSM	ENSG00000130640.15	ENST00000417178.7	2749	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	60.5415340386251	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTCTCAAGGCGCT	-13	True	NA	-12	True	TATAAA	-23	NA	133308878	133279631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133308822
transcript_25794.known	chr10	-	4200	17	FSM	ENSG00000130640.15	ENST00000682332.1	4200	17	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_12	24.3050277720475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCACAAACCGCTTC	188	False	NA	-79	True	GGGGCT	-45	NA	133308977	133278710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_25795.known	chr10	-	3262	17	FSM	ENSG00000130640.15	ENST00000683383.1	3262	17	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	56.2792979256138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	188	False	NA	NA	False	NA	NA	NA	133308977	133279286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_25804.nnic	chr10	+	1066	6	NNC	ENSG00000198546.15	novel	1084	6	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	203.377874902852	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	581	False	NA	30	True	TTTAAA	-27	NA	133308872	133313161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310230_133311715_133311842_133312787
transcript_25805.nnic	chr10	+	1097	6	NNC	ENSG00000198546.15	novel	1084	6	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	189.341596063834	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTCTTGAGTCTTCAT	581	False	NA	27	True	TTTAAA	-24	NA	133308872	133313158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311817_133312787
transcript_25806.known	chr10	+	1084	6	FSM	ENSG00000198546.15	ENST00000361518.10	1084	6	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_5	34.8137903710584	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	-2	True	NA	30	True	TTTAAA	-27	NA	133308913	133313161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_25809.known	chr10	+	2004	5	FSM	ENSG00000198546.15	ENST00000359035.4	2004	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	34.5687720348872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGAGTCTTCATTTCT	25	True	NA	31	True	TTTAAA	-28	NA	133308940	133313162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715
transcript_25811.known	chr10	+	744	5	FSM	ENSG00000165828.15	ENST00000433452.6	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGCCGGGTGCCTGTA	-12	True	NA	NA	False	AATACA	-14	NA	133347372	133352683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352141_133352246
transcript_25813.known	chr10	-	2163	5	FSM	ENSG00000130640.15	ENST00000683031.1	2163	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	14.4633156641207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTAATCCCAGCACTTA	-13	True	NA	NA	False	AATGAA	-44	NA	133309134	133296755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_25820.known	chr10	-	1306	2	FSM	ENSG00000130640.15	ENST00000480198.1	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGACTGGTATTAACC	17	True	NA	NA	False	NA	NA	NA	133308848	133301700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133302981_133308822
transcript_25821.known	chr10	-	628	6	FSM	ENSG00000148803.12	ENST00000368551.1	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	89.318755029389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGTGAAAATGATGGA	-31	True	NA	NA	False	NA	NA	NA	133357737	133355202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_25822.known	chr10	-	689	6	FSM	ENSG00000148803.12	ENST00000278025.9	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_5	32.8426551910773	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTCTGTTCTCACGC	4	True	NA	NA	False	NA	NA	NA	133358019	133355157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_25825.known	chr10	-	762	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	87.3576556461997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCTCTGTTCTCAC	-2	True	NA	NA	False	NA	NA	NA	133358025	133355159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_2583.nic	chr1	-	537	2	ISM	ENSG00000231789.3	ENST00000415330.3	978	3	-7	8440	-7	-8440	5prime_fragment	FALSE	canonical	3	82	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGTTGGCGTGATT	-9	True	NA	-7	True	CATAAA	-17	NA	9687580	9680844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_9681136_9687334
transcript_25834.nic	chr10	-	2183	5	NIC	ENSG00000148803.12	novel	628	6	NA	NA	-16	1193	intron_retention	FALSE	canonical	3	53	junction_4	99.8433147486601	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAACACCAGCTTGGG	270	False	NA	NA	False	AATAAA	-30	NA	133357753	133353964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_25835.nic	chr10	-	2221	5	NIC	ENSG00000148803.12	novel	762	6	NA	NA	-32	1193	intron_retention	FALSE	canonical	3	207	junction_4	33.3719567900955	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAACACCAGCTTGGG	NA	False	NA	NA	False	AATAAA	-30	NA	133358057	133353964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_25839.nic	chr10	-	2170	5	NIC	ENSG00000148803.12	novel	762	6	NA	NA	-32	1142	intron_retention	FALSE	canonical	3	207	junction_4	33.3719567900955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATGGGCAAAACAAAATA	NA	False	NA	NA	False	AGTAAA	-19	NA	133358057	133354015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_25844.nic	chr10	-	3049	4	NIC	ENSG00000148803.12	novel	762	6	NA	NA	-32	1193	intron_retention	FALSE	canonical	3	207	junction_3	37.5854581808798	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAACACCAGCTTGGG	NA	False	NA	NA	False	AATAAA	-30	NA	133358057	133353964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_133356739_133356942_133357014_133357186_133357256_133357922
transcript_25848.nic	chr10	-	2998	4	NIC	ENSG00000148803.12	novel	762	6	NA	NA	-32	1142	intron_retention	FALSE	canonical	3	207	junction_3	37.5854581808798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATGGGCAAAACAAAATA	NA	False	NA	NA	False	AGTAAA	-19	NA	133358057	133354015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_133356739_133356942_133357014_133357186_133357256_133357922
transcript_25853.nic	chr10	-	3253	3	NIC	ENSG00000148803.12	novel	762	6	NA	NA	-32	1193	intron_retention	FALSE	canonical	3	207	junction_2	41.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAACACCAGCTTGGG	NA	False	NA	NA	False	AATAAA	-30	NA	133358057	133353964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_133357014_133357186_133357256_133357922
transcript_25856.known	chr10	-	590	5	FSM	ENSG00000148803.12	ENST00000447176.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	115.006521554214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATTCCAGCTCTGTTC	28	False	NA	NA	False	NA	NA	NA	133357995	133355163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357922
transcript_25860.known	chr10	-	1277	8	FSM	ENSG00000127884.5	ENST00000368547.4	1277	8	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_2	135.237055663342	1096	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCTTGTAGTCATG	-5	True	NA	-31	True	ATTAAA	-20	NA	133373354	133362484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
transcript_25876.known	chr10	+	1283	11	FSM	ENSG00000148824.19	ENST00000477902.6	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	155.57008067106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTGTAACCTTTAA	4779	False	NA	NA	False	NA	NA	NA	133394093	133420464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394185_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_25882.known	chr10	+	3424	11	FSM	ENSG00000148824.19	ENST00000317502.11	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_7	73.9257059486076	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGGAGCAAAGTGGGT	9	True	NA	18	True	NA	NA	NA	133394156	133422520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_25896.known	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	53.7031162164546	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	-11	True	NA	NA	False	NA	NA	NA	133394195	133421307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
transcript_25909.known	chr10	+	953	9	FSM	ENSG00000148824.19	ENST00000432508.3	953	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	179.288829476351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTTGAGGCTCAAGAC	26	True	NA	NA	False	NA	NA	NA	133394173	133420219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_25917.known	chr10	+	1830	7	FSM	ENSG00000148832.16	ENST00000278060.10	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	2.26691175145591	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCAGAGCCATCTTTCC	5	True	NA	8	True	CATAAA	-17	NA	133379261	133391694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133383959_133384213_133388955_133389069_133389589_133389748_133391311
transcript_25926.known	chr10	+	1633	6	FSM	ENSG00000148832.16	ENST00000357296.7	1633	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	9.09065454189081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGGAGATGCTGGACACA	4	True	NA	-32	True	NA	NA	NA	133379260	133391654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133383959_133384213_133388955_133389069_133391311
transcript_25927.known	chr10	+	1482	6	FSM	ENSG00000148832.16	ENST00000356306.9	1482	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	7.33757453113766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTGACTTGAGCTGAGA	-3	True	NA	-62	True	NA	NA	NA	133379286	133391624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133388955_133389069_133389589_133389748_133391311
transcript_25933.known	chr10	+	693	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_5	28.045677028733	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCGTTCTGTGAATTTC	17	True	NA	-68	True	NA	NA	NA	133394223	133399804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
transcript_25936.known	chr10	+	1324	5	FSM	ENSG00000148832.16	ENST00000480071.2	1324	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.7004672795163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTGACTTGAGCTGAGA	-3	True	NA	-62	True	NA	NA	NA	133379286	133391624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133388955_133389069_133391311
transcript_2594.known	chr1	-	3006	6	FSM	ENSG00000178585.15	ENST00000377263.6	3006	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	311.13572601037	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTGAGCTGAGCTGGT	-36	True	NA	-8	True	AATAAA	-16	NA	9910269	9848275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9883704_9883739_9910094
transcript_25952.known	chr11	-	2819	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	2	-29	-2	multi-exon	FALSE	canonical	3	253	junction_1	24.5809320861155	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATATGGTCTCTGTCGT	1261	False	NA	-6	True	AATAAA	-33	NA	207428	202925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_205470_205610_205668_205951_206044_207302
transcript_25953.known	chr11	-	2916	3	FSM	ENSG00000177951.18	ENST00000325147.13	2916	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	7.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	-4	True	NA	-4	True	AATAAA	-35	NA	207382	202923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_205668_205951_206044_207302
transcript_25955.known	chr11	-	684	2	FSM	ENSG00000177951.18	ENST00000479463.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGAGCGTGAAGCGCTTT	0	True	NA	NA	False	NA	NA	NA	207378	205435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_206044_207302
transcript_25959.nic	chr11	+	3812	10	NIC	ENSG00000177963.15	novel	3506	10	NA	NA	-210	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	127.375598957872	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	11	False	NA	13	True	AATAAA	-20	NA	207497	215113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_208939_209174_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
transcript_25962.known	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	27.1825107171668	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	2	True	NA	NA	False	TATAAA	-17	NA	236342	215029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_25964.known	chr11	-	1588	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	61.0584874435069	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	1	True	NA	-53	True	GGGGCT	-22	NA	236343	216178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
transcript_25965.nic	chr11	-	1867	7	NIC	ENSG00000142082.15	novel	2882	7	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	61.3541631295981	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGACTGCAGGTGTTGA	492	False	NA	-19	True	AATACA	-13	NA	236388	216144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_216719_218777_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_25968.known	chr11	-	1475	7	FSM	ENSG00000142082.15	ENST00000525319.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	75.187912740162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTATTTTTAATGAGAG	-10	True	NA	-80	True	NA	NA	NA	236354	216205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233438_236193
transcript_25972.known	chr11	-	1225	7	FSM	ENSG00000142082.15	ENST00000529382.5	1225	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.2810956630511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGGTGAAACCAGAATA	46	True	NA	NA	False	NA	NA	NA	236834	216610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236615
transcript_25986.known	chr11	+	1589	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	871	junction_3	93.0164262673833	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	-12	True	NA	25	True	AATAAA	-19	NA	236975	252984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_25987.known	chr11	+	1427	12	FSM	ENSG00000185627.19	ENST00000352303.9	1427	12	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_10	295.807481507318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATAATAAACCCCTCT	1	True	NA	-6	True	NA	NA	NA	237025	252953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251819_251937_252504
transcript_25991.known	chr11	+	1632	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_9	85.8082621385591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	12	True	NA	7	True	AATAAA	-1	NA	236999	252966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_25992.known	chr11	+	1489	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	294.458601111591	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	13	False	NA	22	True	AATAAA	-16	NA	237037	252981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_25996.known	chr11	+	1591	11	FSM	ENSG00000185627.19	ENST00000431206.6	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	317.910506274958	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	-11	True	NA	22	True	AATAAA	-16	NA	236976	252981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_25997.known	chr11	+	2200	1	FSM	ENSG00000185627.19	ENST00000527982.1	2200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCTCTGTTTTCTT	NA	False	NA	24	True	AATAAA	-18	NA	250783	252983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_250800_253000
transcript_26.known	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00074_+_0_500
transcript_26006.known	chr11	+	3699	14	FSM	ENSG00000142102.16	ENST00000409548.7	3699	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	84.5989494528195	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTGAGACCTGTGGAC	1	True	NA	NA	False	NA	NA	NA	289125	296107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_289240_289803_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_26011.nic	chr11	+	3230	14	NIC	ENSG00000142102.16	novel	3699	14	NA	NA	-28	0	intron_retention	FALSE	canonical	2	6	junction_1	91.4087639681093	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	3	True	NA	18	True	ATTAAA	-22	NA	289097	295676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_289240_289869_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_26027.nnic	chr11	+	3491	13	NNC	ENSG00000142102.16	novel	3699	14	NA	NA	-49	0	intron_retention	FALSE	canonical	3	129	junction_1	72.2985227296443	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	946	False	NA	18	True	ATTAAA	-22	NA	289076	295676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_289240_289794_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_26051.nnic	chr11	+	3621	12	NNC	ENSG00000142102.16	novel	3699	14	NA	NA	-49	0	intron_retention	FALSE	canonical	3	129	junction_1	72.8960541507138	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	946	False	NA	18	True	ATTAAA	-22	NA	289076	295676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_289240_289794_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_26072.known	chr11	+	4418	11	FSM	ENSG00000142102.16	ENST00000474221.5	4418	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	89.6069193756821	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGAGGAGCCGCTG	10	True	NA	20	True	ATTAAA	-24	NA	289134	295678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_289240_289803_290076_290389_290601_290677_292096_292545_292678_292885_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_2609.known	chr1	-	1206	5	FSM	ENSG00000178585.15	ENST00000400904.7	1206	5	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_4	29.1922506840428	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGTTTGTGTTTGA	8	True	NA	-5	True	NA	NA	NA	9910336	9850108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9910094
transcript_26103.known	chr11	-	736	2	FSM	ENSG00000206013.2	ENST00000382614.2	736	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGGCCTCTTTCC	0	True	NA	NA	False	ATTAAA	-19	NA	299526	298199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_298714_299304
transcript_26104.known	chr11	+	844	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5933	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	13	False	NA	-6	True	NA	NA	NA	313526	315240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_313692_313996_314357_314921
transcript_26105.known	chr11	+	804	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	381.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_314357_314673_314810_314921
transcript_26106.known	chr11	+	713	2	FSM	ENSG00000185201.18	ENST00000399817.9	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGACTTCACCTGGGG	2	True	NA	34	True	AATAAA	-20	NA	308105	309397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_308439_309017
transcript_26107.known	chr11	+	662	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	11	True	NA	25	True	AATAAA	-16	NA	314039	315271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_314357_314926
transcript_26108.known	chr11	+	668	2	FSM	ENSG00000185885.17	ENST00000408968.4	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	11873	junction_1	0	2915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_314357_314921
transcript_26109.known	chr11	+	704	2	FSM	ENSG00000185885.17	ENST00000681180.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_314393_314921
transcript_26110.known	chr11	-	587	2	FSM	ENSG00000142089.17	ENST00000679382.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	1024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	15	True	NA	-18	True	AATAAA	-18	NA	320841	319675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_319986_320564
transcript_26111.known	chr11	+	1151	2	FSM	ENSG00000251661.3	ENST00000602429.1	1151	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATAATAACGATTGAT	1339	False	NA	NA	False	ATTAAA	-17	NA	318652	325631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_318747_324574
transcript_26114.nic	chr11	+	3798	6	NIC	ENSG00000182272.12	novel	3750	20	NA	NA	1400	0	intron_retention	FALSE	canonical	3	190	junction_4	21.4718420262445	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	941	False	NA	28	True	AATGAA	-25	NA	376860	382117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_379702_379865_380020_380129_380203_380291_380446_380824_380952_381668
transcript_26116.nic	chr11	+	2959	5	NIC	ENSG00000182272.12	novel	3750	20	NA	NA	-2193	0	intron_retention	FALSE	canonical	3	190	junction_3	12.5573683548744	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	1869	False	NA	28	True	AATGAA	-25	NA	377788	382117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_379702_379865_380020_380129_380446_380824_380952_381668
transcript_26118.nic	chr11	+	2878	14	NIC	ENSG00000184363.10	novel	2817	13	NA	NA	-142	0	intron_retention	TRUE	canonical	3	44	junction_1	57.0770267467439	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	563	False	NA	9	True	AATAAA	-19	NA	394002	404908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_394184_394328_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
transcript_26128.known	chr11	+	2817	13	FSM	ENSG00000184363.10	ENST00000331563.7	2817	13	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	22.1514672200286	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	-19	True	NA	9	True	AATAAA	-19	NA	394208	404908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
transcript_26142.known	chr11	-	1598	10	FSM	ENSG00000185187.13	ENST00000397632.7	1598	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	62.4792311171293	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	18	True	NA	-6	True	AATAAA	-17	NA	417325	405715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
transcript_26143.known	chr11	-	1639	10	FSM	ENSG00000185187.13	ENST00000332725.7	1639	10	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_9	67.107063895624	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
transcript_26145.known	chr11	-	608	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	14	True	NA	-6	True	AATAAA	-17	NA	407135	405715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_406060_406348_406539_407061
transcript_26150.known	chr11	-	2867	23	FSM	ENSG00000185101.13	ENST00000332826.7	2867	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	8.81958751682538	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTTCCTGGCCTC	-15	True	NA	-18	True	AGTAAA	-13	NA	442011	417937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431768_431847_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
transcript_26155.known	chr11	-	2639	22	FSM	ENSG00000185101.13	ENST00000528927.5	2639	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	8.96275994098008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGGGCTCTCAGGCTT	0	True	NA	NA	False	NA	NA	NA	441957	418191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
transcript_2619.nnic	chr1	-	2973	4	NIC	ENSG00000178585.15	novel	3006	6	NA	NA	-19	0	intron_retention	FALSE	canonical	3	41	junction_3	309.950892167704	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTGAGCTGAGCTGGT	-11	True	NA	-8	True	AATAAA	-16	NA	9910355	9848275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_9850777_9871186_9871278_9871968_9872089_9910094
transcript_2623.known	chr1	-	4989	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	22.9213384230075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCACGTTTTTCTT	-31	True	NA	0	True	AATAAA	-35	NA	9943391	9926292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_26230.nic	chr11	+	1998	13	NIC	ENSG00000174915.12	novel	2458	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	70.220041061414	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	-34	True	NA	39	True	AATAAA	-39	NA	450260	491399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_450638_460186_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419_490643_491120
transcript_26232.nnic	chr11	+	2524	12	NNC	ENSG00000174915.12	novel	2458	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	12	junction_4	76.8176976854029	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	-34	True	NA	39	True	AATAAA	-39	NA	450260	491399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_450638_460186_460289_473894_473978_479084_479153_486890_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
transcript_26234.known	chr11	+	2458	12	FSM	ENSG00000174915.12	ENST00000308020.6	2458	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_10	15.3289010242604	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	-16	True	NA	39	True	AATAAA	-39	NA	450278	491399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_450638_460186_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
transcript_2624.known	chr1	-	945	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	41.1398808447274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATGCTCTTCAT	-47	False	NA	-21	True	CATAAA	-14	NA	9943407	9930252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_26241.nic	chr11	+	2328	11	NIC	ENSG00000174915.12	novel	2458	12	NA	NA	-1	0	intron_retention	FALSE	canonical	2	13	junction_2	80.6814104983298	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	31	True	NA	39	True	AATAAA	-39	NA	450325	491399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_450638_460186_460289_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
transcript_26252.nnic	chr11	+	2325	10	NIC	ENSG00000174915.12	novel	2458	12	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_2	88.0618469536546	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	-34	True	NA	39	True	AATAAA	-39	NA	450260	491399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_450638_460186_460289_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
transcript_2627.known	chr1	+	3734	5	FSM	ENSG00000173614.14	ENST00000377205.6	3734	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	5.7662812973354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTCTGATGGA	14	True	NA	2	True	AATAAA	-14	NA	9943474	9985498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9982300
transcript_26280.nic	chr11	-	2019	11	NIC	ENSG00000023191.17	novel	2014	11	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_10	115.901682472689	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	353	False	NA	-4	True	ATTAAA	-15	NA	506873	494514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_506608
transcript_26281.known	chr11	-	1829	11	FSM	ENSG00000023191.17	ENST00000533410.5	1829	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	129.326911352587	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATAATCATTAAAGCA	8	True	NA	-35	True	NA	NA	NA	507218	494545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_507112
transcript_26286.known	chr11	-	2014	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	127.653006231737	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-24	True	NA	-4	True	ATTAAA	-15	NA	506800	494514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
transcript_26287.known	chr11	-	1952	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	139.68120847129	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-16	True	NA	-4	True	ATTAAA	-15	NA	507242	494514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
transcript_2629.known	chr1	+	1094	5	FSM	ENSG00000173614.14	ENST00000403197.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	6.01560470775798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGCAGTGGTCTCT	NA	False	NA	4	True	AATAAA	-17	NA	9943427	9981766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9981255
transcript_26295.known	chr11	-	1725	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	112.079116676845	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTTATAATCATTAAAG	-9	True	NA	-37	True	NA	NA	NA	506785	494547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
transcript_26296.known	chr11	-	1722	10	FSM	ENSG00000023191.17	ENST00000397604.7	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	93.4409432558512	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-27	True	NA	-4	True	ATTAAA	-15	NA	507253	494514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_507112
transcript_26297.known	chr11	-	1864	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	120.382723012898	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTCTTGTCCTTCCTG	405	False	NA	-2	True	ATTAAA	-17	NA	506821	494512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
transcript_26298.known	chr11	-	1791	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_9	99.4932840961987	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATATTTTGGACACTTT	NA	False	NA	-50	True	NA	NA	NA	507300	494560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
transcript_2630.known	chr1	+	625	4	FSM	ENSG00000162444.12	ENST00000294435.8	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	2.35702260395516	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTTTTTCCTTTCCG	-2	True	NA	13	True	AATAAA	-15	NA	9997227	10016021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9997332_10007569_10007749_10008172_10008275_10015781
transcript_2632.known	chr1	+	5905	28	FSM	ENSG00000130939.20	ENST00000343090.11	5905	28	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	93.256420396294	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGAGTCTCTTCTC	-2	True	NA	NA	False	AATAAA	-24	NA	10032957	10181239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10106196_10106584_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
transcript_26333.known	chr11	-	1114	7	FSM	ENSG00000174775.18	ENST00000493230.5	1114	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	115.313220789677	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	15	True	NA	-5	True	AGTAAA	-18	NA	535538	532241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532523_532630_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
transcript_26335.nic	chr11	-	1656	6	NIC	ENSG00000174775.18	novel	1070	6	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	114.887074991054	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	289	False	NA	-5	True	AGTAAA	-18	NA	535264	532241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_534517
transcript_26336.known	chr11	-	1070	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_5	9.09065454189081	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-23	True	NA	-5	True	AGTAAA	-18	NA	535576	532241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
transcript_26338.known	chr11	-	1244	6	FSM	ENSG00000174775.18	ENST00000417302.6	1244	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	118.036265613582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGGATGGTCTTGA	-27	True	NA	-25	True	NA	NA	NA	535580	532261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
transcript_26339.nnic	chr11	-	885	5	NIC	ENSG00000174775.18	novel	1070	6	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	120.740165230962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-2	True	NA	-5	True	AGTAAA	-18	NA	535555	532241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_532523_532630_532756_533452_533613_533765_533945_535415
transcript_26340.known	chr11	-	1151	5	FSM	ENSG00000174775.18	ENST00000451590.5	1151	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_4	7.43303437365925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTTTTCGGCTGAGG	3	True	NA	-6	True	AGTAAA	-17	NA	535550	532242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532756_533452_533613_533765_533945_534211_534376_535415
transcript_26349.known	chr11	+	2765	14	FSM	ENSG00000161328.11	ENST00000270115.8	2765	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.69230769230769	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGCCCAGCCCCGG	11	True	NA	4	True	AATAAA	-13	NA	537526	554912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_537606_538597_538861_539579_539727_540673_540862_541536_541625_544719_544781_549901_549999_550071_550273_551130_551303_551650_551828_551902_551968_552089_552233_552568_552703_553962
transcript_26352.known	chr11	-	2057	14	FSM	ENSG00000185522.9	ENST00000329451.8	2057	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	6.37487672464636	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAAATGTTGGTTTG	-15	True	NA	-7	True	AGTAAA	-21	NA	560738	554849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_555112_555304_555504_555733_555931_555995_556116_556191_556376_556491_556589_556834_557098_557398_557488_557571_557641_557883_558040_558160_558249_558613_558767_558855_558980_560682
transcript_2636.known	chr1	+	4772	27	FSM	ENSG00000130939.20	ENST00000253251.12	4772	27	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_13	35.0977502271288	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCCTCTCCCCCT	NA	False	NA	-45	True	NA	NA	NA	10032831	10180367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
transcript_26379.nic	chr11	+	1620	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	184.67116721351	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	1435	False	NA	27	True	AATAAA	-19	NA	560922	564025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_26381.known	chr11	+	2017	6	FSM	ENSG00000099849.15	ENST00000397583.8	2017	6	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_1	207.037194725972	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	-33	True	NA	27	True	AATAAA	-19	NA	560969	564025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_561478_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_26386.nic	chr11	+	1533	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_4	159.164223366936	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	1435	False	NA	23	True	AATAAA	-15	NA	560922	564021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
transcript_26388.nic	chr11	+	1698	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-33	0	intron_retention	FALSE	canonical	3	73	junction_4	164.840832320151	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	1435	False	NA	27	True	AATAAA	-19	NA	560922	564025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563479_563557
transcript_26392.known	chr11	+	1450	5	FSM	ENSG00000099849.15	ENST00000454668.2	1450	5	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_1	210.445361079782	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	447	False	NA	23	True	AATAAA	-15	NA	561449	564021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_561478_561761_561893_562078_562777_563188_563318_563557
transcript_26397.known	chr11	+	1745	4	FSM	ENSG00000099849.15	ENST00000431809.5	1745	4	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_1	216.195898820183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTCAATAAACTGCCC	916	False	NA	-5	True	NA	NA	NA	560403	563993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_560515_561761_561893_562078_562777_563188
transcript_26398.known	chr11	+	1679	4	FSM	ENSG00000099849.15	ENST00000414138.6	1679	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	192.461828827317	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	-32	True	NA	-18	True	NA	NA	NA	560970	563980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_561034_561761_561893_562083_562777_563188
transcript_264.known	chr1	+	1078	2	FSM	ENSG00000237491.10	ENST00000665867.1	1078	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTTCTTCAATTTC	NA	False	NA	NA	False	NA	NA	NA	778808	787186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_779093_786392
transcript_26410.known	chr11	-	1965	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	27	0	7	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTTTTGTTGTTA	-6	True	NA	-3	True	TATAAA	-16	NA	568420	565659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_567556_568351
transcript_26411.known	chr11	-	816	2	FSM	ENSG00000247095.4	ENST00000533920.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCCGCCCTGCTGTGG	7390	False	NA	-100	True	NA	NA	NA	568457	567143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_567854_568351
transcript_26414.known	chr11	+	5178	18	FSM	ENSG00000070047.13	ENST00000534320.5	5178	18	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_15	67.8080947694519	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATCTTTAGAAACCT	10	True	NA	52	True	NA	NA	NA	576485	612043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610666_610762_610953_611083_611633
transcript_26415.known	chr11	-	1923	11	FSM	ENSG00000185507.21	ENST00000525445.6	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	11.7029910706622	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-1	True	NA	-5	True	AATAAA	-16	NA	615950	612554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_26416.known	chr11	-	1992	10	FSM	ENSG00000185507.21	ENST00000330243.9	1992	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	12.2474487139159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCGCCCAGTCTAATAA	9198	False	NA	-41	True	NA	NA	NA	615970	612590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615648_615912
transcript_26420.nic	chr11	-	2059	10	NIC	ENSG00000185507.21	novel	1923	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_5	9.66985898757092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-1	True	NA	-5	True	AATAAA	-16	NA	615950	612554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_26422.known	chr11	-	1807	10	FSM	ENSG00000185507.21	ENST00000348655.11	1807	10	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	19.9598362149692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	9247	False	NA	-5	True	AATAAA	-16	NA	615921	612554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_26427.known	chr11	-	1604	9	FSM	ENSG00000185507.21	ENST00000532326.5	1604	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	27.1281680177634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCGCCCAGTCTAATAA	9185	False	NA	-41	True	NA	NA	NA	615983	612590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614475_614532_614796_615008_615096_615260_615344_615648_615912
transcript_26428.known	chr11	-	1776	9	FSM	ENSG00000185507.21	ENST00000533182.5	1776	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	16.7551298114936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACGTACTGGCATCTT	-1	True	NA	-11	True	AATAAA	-10	NA	615950	612560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_614038_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_26432.nic	chr11	-	2220	8	NIC	ENSG00000185507.21	novel	1923	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_7	8.79006860738009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-1	True	NA	-5	True	AATAAA	-16	NA	615950	612554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_612801_612998_613118_613205_613596_613784_614535_614796_615008_615096_615260_615344_615648_615912
transcript_26437.known	chr11	-	1596	9	FSM	ENSG00000185507.21	ENST00000469048.6	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	16.7779617355625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTCTAATAAAAAGAACT	33	True	NA	-33	True	NA	NA	NA	615612	612582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614475_614535_614796_615008_615096_615260_615344
transcript_26438.known	chr11	-	526	4	FSM	ENSG00000070031.4	ENST00000176195.4	526	4	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_3	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGAGTTGTCTGTGTC	-1	True	NA	-7	True	AATAAA	-19	NA	627181	626308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_626531_626696_626790_626887_626990_627072
transcript_26483.known	chr11	-	2190	12	FSM	ENSG00000177030.19	ENST00000382409.4	2190	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	158.498324938355	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	1	True	NA	-15	True	AATAAA	-15	NA	695222	644232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
transcript_26497.nic	chr11	-	2117	12	NIC	ENSG00000177030.19	novel	2190	12	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	133.186875485736	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-29	True	NA	-15	True	AATAAA	-15	NA	695069	644232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694678
transcript_26500.known	chr11	-	2267	12	FSM	ENSG00000177030.19	ENST00000683307.1	2267	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	158.498324938355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCCCTGCCCCACAC	NA	False	NA	-21	True	AATAAA	-9	NA	707118	644238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_706571
transcript_26539.known	chr11	+	1423	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	20.2051973511767	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	8	True	NA	22	True	AATAAA	-23	NA	695815	704129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
transcript_2654.known	chr1	+	7800	21	FSM	ENSG00000054523.19	ENST00000377093.9	7800	21	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_20	34.4501088532388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGATTTCTCTCTATG	-1	True	NA	27	True	AATAAA	-36	NA	10210569	10308597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282399_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10303162
transcript_26545.known	chr11	+	669	4	FSM	ENSG00000177042.16	ENST00000488769.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	23.2713462342761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGCCTCCCCACTCCA	-3	True	NA	NA	False	NA	NA	NA	695804	701127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_695847_698868_698889_700141_700236_700614
transcript_26552.known	chr11	-	567	2	FSM	ENSG00000177030.19	ENST00000526857.2	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACGCTGTTCTAACAAT	451	False	NA	NA	False	NA	NA	NA	706624	697485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_698000_706571
transcript_26553.known	chr11	+	3030	21	FSM	ENSG00000177106.17	ENST00000318562.13	3030	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	56.2919843316968	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTCTCAGTTCTCT	-9	True	NA	20	True	ATTAAA	-20	NA	706230	727727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_26554.known	chr11	+	3266	22	FSM	ENSG00000177106.17	ENST00000533256.5	3266	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	63.4871386978918	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	906	False	NA	17	True	ATTAAA	-17	NA	706116	727724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_706289_706676_706802_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_26555.known	chr11	+	2047	5	FSM	ENSG00000177042.16	ENST00000492023.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.8688329276503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGAATTCTCCTAATTA	-6	True	NA	14	True	AATAAA	-15	NA	695801	704121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_695847_698868_700236_700614_700708_702944_703147_703781
transcript_26556.known	chr11	+	1597	6	FSM	ENSG00000177106.17	ENST00000527832.5	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	61.5740204956603	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	3	True	NA	15	True	ATTAAA	-15	NA	724561	727722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_26557.known	chr11	+	2554	21	FSM	ENSG00000177106.17	ENST00000650127.1	2554	21	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_20	51.7299719698358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTAAGCAATTAAACCAG	0	True	NA	-15	True	NA	NA	NA	706215	727692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_727356
transcript_26558.known	chr11	+	1572	5	FSM	ENSG00000177042.16	ENST00000397512.8	1572	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	46.8881648180007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	-5	True	NA	22	True	AATAAA	-23	NA	695642	704129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_695823_698868_698889_700141_700236_700614_700708_702944
transcript_26559.known	chr11	+	342	2	FSM	ENSG00000177106.17	ENST00000534027.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTATTTTGTATCA	167	False	NA	6	True	NA	NA	NA	726560	727051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_726752_726900
transcript_26561.known	chr11	+	1199	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	102.156742312977	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	17	True	NA	21	True	ATTAAA	-15	NA	747463	765012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
transcript_2657.nic	chr1	+	2483	20	NIC	ENSG00000054523.19	novel	10855	49	NA	NA	-83	4869	combination_of_known_junctions	FALSE	canonical	3	38	junction_12	44.965360629152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGGAAGAAGCAGATC	NA	False	NA	26	True	NA	NA	NA	10210486	10297203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173
transcript_26572.known	chr11	+	1231	8	FSM	ENSG00000177156.11	ENST00000528097.5	1231	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	712.943939748764	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	-19	True	NA	21	True	ATTAAA	-15	NA	747427	765012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763941_764287_764434_764812
transcript_2658.nic	chr1	+	2405	20	ISM	ENSG00000054523.19	ENST00000377093.9	7800	21	-83	11394	-83	4869	5prime_fragment	FALSE	canonical	3	131	junction_12	28.4160814365832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGGAAGAAGCAGATC	NA	False	NA	26	True	NA	NA	NA	10210486	10297203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282399_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173
transcript_2660.nic	chr1	+	2288	19	ISM	ENSG00000054523.19	ENST00000377093.9	7800	21	-31	11555	-31	4708	5prime_fragment	FALSE	canonical	3	131	junction_12	29.193744044881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAATTGATATGAAACA	-3	True	NA	NA	False	NA	NA	NA	10210538	10297042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282399_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896
transcript_26614.nnic	chr11	-	2486	9	NNC	ENSG00000177225.17	novel	4363	8	NA	NA	-51	0	intron_retention	FALSE	non_canonical	0	0	junction_1	19.4550764583437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	NA	False	NA	-36	True	AATAAA	-15	NA	777539	767227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_767869_769791_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_26650.nic	chr11	-	2215	8	NIC	ENSG00000177225.17	novel	4363	8	NA	NA	3	692	intron_retention	FALSE	canonical	3	9	junction_7	17.1690276429413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGCCTGGCATGGTGGTG	311	False	NA	NA	False	AATACA	-5	NA	777176	769777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_776679
transcript_26651.known	chr11	-	4363	8	FSM	ENSG00000177225.17	ENST00000319863.13	4363	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	12.8364913509916	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	0	True	NA	-30	True	AATAAA	-21	NA	777487	767221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_26656.nic	chr11	-	773	7	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	17.2916164657906	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	NA	False	NA	-30	True	AATAAA	-21	NA	777539	767221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_26657.known	chr11	-	756	7	FSM	ENSG00000177225.17	ENST00000526325.5	756	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.2538656712698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	0	True	NA	-36	True	AATAAA	-15	NA	777487	767227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_767374_771332_771468_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_26665.known	chr11	-	995	7	FSM	ENSG00000177225.17	ENST00000524550.5	995	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	19.8046010366839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGAGGGGAGGGCCCAG	12	True	NA	NA	False	NA	NA	NA	777475	770469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_770904_770992_771105_771332_771427_772426_772522_774007_774114_775065_775143_777398
transcript_26667.nic	chr11	-	1948	7	NIC	ENSG00000177225.17	novel	4363	8	NA	NA	-51	692	intron_retention	FALSE	canonical	3	34	junction_1	10.2048463432278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGCCTGGCATGGTGGTG	NA	False	NA	NA	False	AATACA	-5	NA	777539	769777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_26672.known	chr11	-	559	6	FSM	ENSG00000177225.17	ENST00000532839.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.969449122207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCGGCCGTGCAGAACC	3	True	NA	NA	False	NA	NA	NA	777484	771034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_771105_771332_771427_772426_772522_773521_773630_774007_774114_777398
transcript_26682.known	chr11	+	610	4	FSM	ENSG00000255284.3	ENST00000525941.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.68331255192114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	18	True	NA	NA	False	AATACA	-15	NA	777607	784297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_777696_778112_778219_783529_783672_784023
transcript_26685.known	chr11	+	765	2	FSM	ENSG00000255284.3	ENST00000530083.2	891	2	8	118	0	-117	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCAGTTTGGGAGG	-8	True	NA	NA	False	AAGAAA	-36	NA	777581	784180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_777696_783529
transcript_26686.known	chr11	-	1605	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTCTTGCATCCTCAT	3	True	NA	-5	True	AATAAA	-15	NA	790090	787114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_788659_790029
transcript_2669.known	chr1	+	2268	13	FSM	ENSG00000142657.21	ENST00000270776.13	2268	13	0	0	0	0	multi-exon	FALSE	canonical	3	1198	junction_9	123.89847994763	1816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCTGATTTATTTCC	-4	True	NA	21	True	ATTAAA	-18	NA	10399063	10420511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10399126_10399628_10399705_10400392_10400573_10403070_10403137_10404160_10404280_10408070_10408141_10411417_10411553_10413061_10413252_10416986_10417118_10417375_10417510_10418825_10418926_10419416_10419540_10419629
transcript_267.nnic	chr1	+	1654	7	NNC	ENSG00000228794.11	novel	1932	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	34.7918413169269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGTACAATAGCTA	767	False	NA	10	True	AATAAA	-12	NA	827602	854385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853439_853487
transcript_26701.known	chr11	-	2984	16	FSM	ENSG00000177595.19	ENST00000347755.10	2984	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	29.8281000996637	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	10	True	NA	-12	True	NA	NA	NA	805231	799183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
transcript_26717.nic	chr11	-	2969	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	32.3226786568743	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	7572	False	NA	-13	True	NA	NA	NA	805268	799184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
transcript_268.known	chr1	+	6616	5	FSM	ENSG00000228794.11	ENST00000445118.7	6616	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.785686296445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATGACTATATAACAT	762	False	NA	NA	False	AATAAA	-19	NA	827597	859446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390
transcript_26800.known	chr11	-	1790	10	FSM	ENSG00000177542.11	ENST00000531214.5	1790	10	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_9	140.49603482828	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACACCCCCAGGGACAG	7246	False	NA	NA	False	NA	NA	NA	797995	791643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_797611
transcript_26803.known	chr11	-	2640	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_9	51.9358578761662	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-10	True	NA	-6	True	AATAAA	-18	NA	798281	790474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
transcript_26830.known	chr11	+	1680	1	FSM	ENSG00000288675.1	ENST00000678030.1	1680	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGCAGTTTTGTTGCT	9534	False	NA	NA	False	AATAAA	-21	NA	797510	799190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_797500_799200
transcript_26831.known	chr11	-	2796	10	FSM	ENSG00000177542.11	ENST00000320230.9	2796	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	128.231561377585	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	8978	False	NA	-6	True	AATAAA	-18	NA	796263	790474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_796042
transcript_26832.known	chr11	-	3917	14	FSM	ENSG00000177595.19	ENST00000524486.5	3917	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_13	26.3602713439267	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGATTTATTTGTTG	7737	False	NA	-8	True	NA	NA	NA	805103	799179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_803648_804093
transcript_26833.known	chr11	-	2886	15	FSM	ENSG00000177595.19	ENST00000411829.6	2886	15	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	30.6691528865	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	8371	False	NA	-12	True	NA	NA	NA	804469	799183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093
transcript_26836.known	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	5928	junction_1	1236.54283690457	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	-3	True	NA	30	True	AATAAA	-18	NA	809966	812876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
transcript_26841.known	chr11	+	353	4	FSM	ENSG00000177600.9	ENST00000532004.5	353	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3756.21816311152	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCATGAGCACTTTGT	-5	True	NA	34	True	AATAAA	-22	NA	809964	812880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_810049_811596_811646_812534_812634_812759
transcript_26842.known	chr11	+	637	4	FSM	ENSG00000177600.9	ENST00000530797.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	6779	junction_3	930.305087353367	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	14	False	NA	28	True	AATAAA	-16	NA	809983	812874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_810358_811596_811646_812534_812634_812759
transcript_26848.known	chr11	+	2416	10	FSM	ENSG00000177666.17	ENST00000336615.9	2416	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.2112122607835	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCGCCTGCCCCTCCCC	-2	True	NA	NA	False	AATAAA	-20	NA	818913	825573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_818959_819573_819906_821627_821861_821957_822024_822396_822607_823526_823588_823693_823856_823997_824131_824313_824437_824522
transcript_26860.nic	chr11	+	2130	10	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	81.5617617983717	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	996	False	NA	14	True	AATAAA	-15	NA	827154	831986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_827460_828259_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
transcript_26872.known	chr11	+	2166	9	FSM	ENSG00000177685.17	ENST00000525077.2	2166	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	80.4394181977965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	-4	True	NA	14	True	AATAAA	-15	NA	827918	831986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
transcript_26880.known	chr11	+	1663	8	FSM	ENSG00000177685.17	ENST00000450448.5	1663	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	81.3290118178335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGGGCCTTCCGTGT	102	False	NA	19	True	AATAAA	-20	NA	828259	831991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_831223_831296_831534
transcript_269.known	chr1	+	5441	3	FSM	ENSG00000228794.11	ENST00000669922.1	5441	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGCCACTATATATT	767	False	NA	NA	False	NA	NA	NA	827602	846365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_827776_829002_829105_841199
transcript_26905.known	chr11	+	2440	2	FSM	ENSG00000177685.17	ENST00000528694.1	2440	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	4	True	NA	13	True	AATAAA	-14	NA	829306	831985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_831296_831534
transcript_26907.known	chr11	+	1407	10	FSM	ENSG00000177697.19	ENST00000530726.5	1407	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	204.902144666397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	39	False	NA	24	True	AATAAA	-16	NA	833008	838831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_833023_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132_838368_838444
transcript_26910.known	chr11	+	1545	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_1	121.901343306791	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	-18	True	NA	24	True	AATAAA	-16	NA	832951	838831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_26914.known	chr11	+	1835	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	127.322826079287	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	22	True	NA	28	True	AATAAA	-20	NA	832991	838835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
transcript_26916.known	chr11	+	1486	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	124.479979539372	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	-18	True	NA	27	True	AATAAA	-19	NA	832951	838834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_26922.known	chr11	-	585	3	FSM	ENSG00000177700.6	ENST00000534030.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCTGCAGCTGGTCC	-6	True	NA	NA	False	NA	NA	NA	842529	837355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_837606_840261_840481_842413
transcript_26925.known	chr11	-	876	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	3328	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTTTGCACCAC	-6	True	NA	-2	True	GGGGCT	-42	NA	842529	839720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_840481_842413
transcript_2693.known	chr1	+	571	6	FSM	ENSG00000251503.8	ENST00000602787.6	571	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	111.755089369567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGACTTTCCTCGCTT	-24	True	NA	NA	False	TTTAAA	-38	NA	10430434	10451411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_26942.known	chr11	+	1379	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	157.932689380635	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-2	True	NA	14	True	AATAAA	-14	NA	842851	867111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26944.known	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	194.614201691449	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	-14	True	NA	19	True	AATAAA	-19	NA	842940	867116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26945.known	chr11	+	1426	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	211.261353245216	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	-32	True	NA	19	True	AATAAA	-19	NA	844080	867116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26946.nic	chr11	+	2032	9	NIC	ENSG00000214063.12	novel	1430	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	212.523491348604	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-2	True	NA	14	True	AATAAA	-14	NA	842952	867111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_843670_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26949.known	chr11	+	1462	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.579259983575	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	18	True	NA	19	True	AATAAA	-19	NA	844445	867116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26954.known	chr11	+	1332	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	251.445453978652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	12	False	NA	19	True	AATAAA	-19	NA	842823	867116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26955.known	chr11	+	1025	8	FSM	ENSG00000214063.12	ENST00000397411.6	1025	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	213.674270508995	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCCCCCTGGGAGGGGT	0	True	NA	NA	False	NA	NA	NA	842811	866817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_842916_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26961.known	chr11	+	834	8	FSM	ENSG00000214063.12	ENST00000525201.5	834	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	286.106587816214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGCACCCACAGCTGCC	40	True	NA	NA	False	NA	NA	NA	844152	866676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_844187_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26971.nic	chr11	+	1710	7	FSM	ENSG00000214063.12	ENST00000527644.2	1687	7	-23	0	-23	0	multi-exon	FALSE	canonical	3	601	junction_4	29.3522666170018	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	2582	False	NA	14	True	AATAAA	-14	NA	849792	867111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_26986.known	chr11	-	1477	14	FSM	ENSG00000177830.18	ENST00000436108.6	1477	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	207.24998483237	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGGGTCTGCTGCAGT	-10	True	NA	-11	True	AATACA	-19	NA	910831	869766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_2699.known	chr1	+	905	5	FSM	ENSG00000175279.22	ENST00000309048.8	905	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	65.8046350951056	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGGTTACTAATGT	-26	True	NA	15	True	AATAAA	-15	NA	10430432	10442808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_26993.known	chr11	-	3260	13	FSM	ENSG00000177830.18	ENST00000323578.13	3260	13	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_12	91.9188576348123	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTTTGTGCTGCCAG	11	True	NA	NA	False	NA	NA	NA	910810	867858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_26998.nic	chr11	-	1414	13	NIC	ENSG00000177830.18	novel	1477	14	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	240.661400565654	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	4429	False	NA	-6	True	AATACA	-24	NA	910856	869761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_27.known	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00076_+_0_600
transcript_27003.known	chr11	-	1289	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	160.612361225755	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-14	True	NA	-6	True	AATACA	-24	NA	910835	869761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_27025.known	chr11	+	4587	22	FSM	ENSG00000183020.15	ENST00000448903.7	4587	22	0	0	0	0	multi-exon	FALSE	canonical	2	111	junction_17	34.0018006726054	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	-31	True	NA	6	True	AATAAA	-14	NA	925869	1012240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985434_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
transcript_27027.known	chr11	+	3072	21	FSM	ENSG00000183020.15	ENST00000528815.5	3072	21	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	54.9917266504699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGCGTGAACGTGGCG	-1	True	NA	29	True	ATTAAA	-11	NA	925899	1010919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985431_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
transcript_2703.known	chr1	+	1469	5	FSM	ENSG00000251503.8	ENST00000400900.6	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	120.640996348671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCATGGATTATAGC	25	False	NA	NA	False	NA	NA	NA	10430101	10452153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10451376
transcript_2705.known	chr1	+	914	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	64.0800280898815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTCAGAGGATGGAAGC	30	False	NA	53	True	AAGAAA	-2	NA	10430782	10442334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_27050.known	chr11	-	3627	6	FSM	ENSG00000078902.16	ENST00000317204.11	3627	6	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_5	16.7690190530037	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGTTCCCGAGTAT	-8	True	NA	-4	True	AATAAA	-21	NA	1309632	1274370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644_1295795_1309465
transcript_27053.known	chr11	-	684	5	FSM	ENSG00000078902.16	ENST00000530541.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	145.052576674804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGACATGTTCCCCAAC	1	True	NA	NA	False	NA	NA	NA	1309623	1277154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1309465
transcript_27056.known	chr11	+	939	1	FSM	ENSG00000255153.1	ENST00000530897.1	939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGACTGGCCTGGAA	NA	False	NA	4	True	AATAAA	-16	NA	1309768	1310707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1309800_1310700
transcript_27058.known	chr11	+	3211	21	FSM	ENSG00000174672.16	ENST00000529433.5	3211	21	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	12.6920250551281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCTGCAAGATATTTT	-33	True	NA	-19	True	TTTAAA	-1	NA	1389900	1461714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
transcript_27060.known	chr11	+	4089	20	FSM	ENSG00000174672.16	ENST00000308219.13	4089	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_18	18.8999406409832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGACGCAGGTCTTCA	NA	False	NA	6	True	AATAAA	-14	NA	1389898	1462685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1459191_1459240_1460969
transcript_27062.known	chr11	-	795	5	FSM	ENSG00000182208.15	ENST00000526462.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.5567159000768	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGGGCAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	1501247	1470244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1501076
transcript_27063.known	chr11	-	2228	10	FSM	ENSG00000250644.3	ENST00000636615.1	2228	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	496.892218235716	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATACCCATGCAGCTCC	34	False	NA	-21	True	NA	NA	NA	1763954	1734820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1735430_1747666_1748120_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
transcript_27068.known	chr11	-	1597	9	FSM	ENSG00000117984.15	ENST00000637387.1	1597	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	402.153888455651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTATCCTGGGGCTCCC	47	False	NA	NA	False	NA	NA	NA	1763941	1753205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753881_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
transcript_27080.known	chr11	-	1512	9	FSM	ENSG00000117984.15	ENST00000636843.1	1512	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	402.350107959474	6746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGCCTGTCTGTCTC	40	False	NA	NA	False	NA	NA	NA	1763948	1753312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759634_1761308_1761469_1763791
transcript_27082.known	chr11	-	1790	9	FSM	ENSG00000117984.15	ENST00000636571.1	1790	9	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_7	390.835323378018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGCTAGAGGCCTGAGG	-6	True	NA	NA	False	NA	NA	NA	1763927	1752998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761329_1761469_1763791
transcript_27086.known	chr11	-	1544	9	FSM	ENSG00000117984.15	ENST00000438213.6	1544	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	398.538717535699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGCCGGCGGCCCAAG	-6	True	NA	NA	False	NA	NA	NA	1763927	1753382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753902_1753993_1754256_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
transcript_27102.known	chr11	+	919	5	FSM	ENSG00000214026.11	ENST00000381514.7	919	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	591.920813960787	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCAGCTTTTCTTGTTTC	2	True	NA	NA	False	NA	NA	NA	1947340	1962838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1962238
transcript_27103.known	chr11	-	989	5	FSM	ENSG00000130600.20	ENST00000428066.7	1243	5	0	254	0	9	multi-exon	FALSE	canonical	3	8	junction_1	2.59807621135332	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGCGTGAGTGTGA	239	False	NA	NA	False	NA	NA	NA	2001470	1995429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_2001217
transcript_27104.known	chr11	-	1485	2	FSM	ENSG00000183734.5	ENST00000331289.5	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCTCCTATCACCTA	1	True	NA	-6	True	AATAAA	-14	NA	2270588	2268497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2269127_2269732
transcript_27106.known	chr11	+	1482	8	FSM	ENSG00000110651.12	ENST00000263645.10	1482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_1	137.734142018423	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGTGCAGTCCCTC	-3	True	NA	30	True	AATAAA	-22	NA	2377309	2397397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2377616_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627_2396715_2396803
transcript_27107.known	chr11	-	1460	3	FSM	ENSG00000238184.1	ENST00000413483.1	1460	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTGTGCATTAGTC	19	True	NA	NA	False	AATACA	-14	NA	2377992	2328748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2329693_2334910_2335020_2377585
transcript_27113.known	chr11	+	1544	4	FSM	ENSG00000184281.15	ENST00000380996.9	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	130.742325034992	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTATCTGGGCCC	96	False	NA	21	True	AATAAA	-21	NA	2400487	2403878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2400799_2402293_2402451_2402610_2402653_2402844
transcript_27115.known	chr11	+	863	4	FSM	ENSG00000184281.15	ENST00000435795.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	158.800363839494	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCATGAGTGACAACG	11	True	NA	NA	False	NA	NA	NA	2400762	2402971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2400799_2401838_2402148_2402293_2402451_2402610
transcript_27117.known	chr11	+	851	4	FSM	ENSG00000184281.15	ENST00000440813.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	150.142894899788	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCATGGAGGCCTGC	1348	False	NA	NA	False	NA	NA	NA	2402099	2403448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2402148_2402293_2402451_2402610_2402653_2402844
transcript_27121.known	chr11	+	1472	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	67.5	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	-2	True	NA	19	True	AATAAA	-19	NA	2400749	2403876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2400799_2402293_2402451_2402610
transcript_27122.nic	chr11	+	2842	3	ISM	ENSG00000184281.15	ENST00000440813.1	851	4	-1372	-427	-22	0	intron_retention	FALSE	canonical	3	40	junction_1	159	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	-24	True	NA	18	True	AATAAA	-18	NA	2400727	2403875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_2402148_2402293_2402451_2402610
transcript_27124.known	chr11	+	979	3	FSM	ENSG00000184281.15	ENST00000485682.6	979	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	177.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCACACCAGCATGAGT	266	False	NA	NA	False	NA	NA	NA	2401017	2402964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2401486_2402293_2402451_2402610
transcript_27125.known	chr11	+	1423	2	FSM	ENSG00000184281.15	ENST00000451491.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	18	False	NA	18	True	AATAAA	-18	NA	2402292	2403875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2402451_2402610
transcript_27129.known	chr11	-	775	4	FSM	ENSG00000129757.15	ENST00000647251.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	81.6129074758807	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGGAA	46	False	NA	-64	True	TATAAA	-39	NA	2885728	2883631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2883911_2883998_2884135_2885201_2885467_2885633
transcript_27138.known	chr11	+	1543	11	FSM	ENSG00000110628.16	ENST00000649076.2	1543	11	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_3	18.2032964047724	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	-27	True	NA	13	True	AATAAA	-21	NA	2902277	2925246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_27141.known	chr11	+	1755	11	FSM	ENSG00000110628.16	ENST00000380574.5	1755	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.777003896253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	26	False	NA	13	True	AATAAA	-21	NA	2902419	2925246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2902719_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_27146.known	chr11	+	1225	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	37.7491721763537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	-22	True	NA	-6	True	AATAAA	-2	NA	2902282	2925227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_27156.known	chr11	-	920	2	FSM	ENSG00000181649.8	ENST00000314222.5	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGGTCCACACCCTC	0	True	NA	NA	False	AATAAA	-18	NA	2929420	2928272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2928668_2928895
transcript_2717.known	chr1	+	584	3	FSM	ENSG00000175279.22	ENST00000462462.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	370	False	NA	NA	False	AATAGA	-5	NA	10431122	10442502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10431402_10440346_10440414_10442264
transcript_27184.known	chr11	-	1941	16	FSM	ENSG00000205531.13	ENST00000526115.5	1941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	530.763081693602	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGTGTAGAGTAGGG	5	True	NA	NA	False	NA	NA	NA	2992377	2945111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2989128_2989272_2992253
transcript_2719.known	chr1	+	626	4	FSM	ENSG00000251503.8	ENST00000470413.6	626	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	123.381071842033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	307	False	NA	15	True	AATAAA	-16	NA	10430383	10451659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10451376
transcript_27192.known	chr11	-	2463	16	FSM	ENSG00000205531.13	ENST00000380542.9	2463	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	479.423987718596	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCACTGTGCCATGTGG	-25	True	NA	-8	True	ATTAAA	-16	NA	2992329	2944436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_272.known	chr1	-	1317	1	FSM	ENSG00000225880.5	ENST00000473798.1	1317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAAGCTCACCTTTTA	-7	True	NA	-12	True	AATAAA	-14	NA	827522	826205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_826200_827500
transcript_27203.nic	chr11	-	2696	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	463.652364715335	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	248	False	NA	-2	True	ATTAAA	-22	NA	2992134	2944430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2991793
transcript_27205.known	chr11	-	2479	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	379.518444874554	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	5	True	NA	-2	True	ATTAAA	-22	NA	2992377	2944430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_27209.nic	chr11	-	2564	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	472.661337318717	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	NA	False	NA	-2	True	ATTAAA	-22	NA	2992426	2944430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972280_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_2723.known	chr1	+	1922	9	FSM	ENSG00000142655.13	ENST00000356607.9	1922	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	12.0409457685017	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	-3	True	NA	21	True	AATAAA	-21	NA	10474949	10630758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10475003_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_27243.known	chr11	-	2737	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_21	157.761248633015	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-14	True	NA	-9	True	AATAAA	-17	NA	3057423	3000928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
transcript_27244.known	chr11	-	2805	23	FSM	ENSG00000110619.18	ENST00000531387.5	2805	23	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_20	187.845840830601	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTCTGCATGTT	190	False	NA	-2	True	AATAAA	-24	NA	3057437	3000921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3047752_3048002_3057342
transcript_27250.known	chr11	-	2491	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	99.63709660768	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-9	True	NA	-9	True	AATAAA	-17	NA	3057418	3000928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_27251.nic	chr11	-	2534	22	NIC	ENSG00000110619.18	novel	2805	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_20	130.322850457907	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTCTCTGTCTTGTTC	-14	True	NA	-10	True	AATAAA	-16	NA	3057423	3000929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
transcript_2727.nnic	chr1	+	1949	9	NNC	ENSG00000142655.13	novel	1922	9	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	33.0596052608013	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	48	False	NA	21	True	AATAAA	-21	NA	10475000	10630758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_10475081_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_27282.nic	chr11	-	2366	19	ISM	ENSG00000110619.18	ENST00000397111.9	2685	22	-173	4465	-173	-4457	5prime_fragment	FALSE	canonical	3	538	junction_18	39.8686113733537	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAAGAAAAGAGACG	NA	False	NA	NA	False	ATTAAA	-2	NA	3057786	3005386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_2730.nnic	chr1	+	1859	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	34.9068731902238	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	NA	False	NA	21	True	AATAAA	-21	NA	10474883	10630758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_27302.known	chr11	-	3854	22	FSM	ENSG00000021762.20	ENST00000263650.12	3854	22	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_9	6.48179029606612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGGAAACGAGAGGAGG	-21	True	NA	1	True	AATAAA	-31	NA	3165310	3087106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3120420_3120625_3121996_3122099_3122347_3122429_3126472_3126556_3129012_3129170_3165215
transcript_27307.known	chr11	-	2798	21	FSM	ENSG00000021762.20	ENST00000348039.9	2798	21	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	8.08254291668161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTCCGCCCAGCGCTGG	-1	True	NA	NA	False	NA	NA	NA	3165352	3088000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3121996_3122099_3122347_3122429_3126472_3126556_3129012_3129170_3165215
transcript_27316.known	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	149.541164901174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	5	True	NA	-34	True	NA	NA	NA	3379146	3359116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_27321.known	chr11	-	1018	6	FSM	ENSG00000005801.18	ENST00000438262.6	1018	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	162.974353810653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTCCCACCTTACTGA	25	True	NA	NA	False	NA	NA	NA	3379126	3359996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3362545_3362603_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_27322.known	chr11	-	2389	6	FSM	ENSG00000005801.18	ENST00000429541.6	2389	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	176.777374117843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATTATACTAGATGGAA	-1	True	NA	59	True	AATATA	-43	NA	3379218	3358944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3377616_3377901_3379037
transcript_27323.known	chr11	-	3187	6	FSM	ENSG00000005801.18	ENST00000399602.9	3187	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	187.67056242256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	5	True	NA	-2	True	AATAAA	-15	NA	3379146	3357926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_27324.known	chr11	-	579	5	FSM	ENSG00000005801.18	ENST00000529678.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	183.572192883345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATAATGGACTTAACCA	12	True	NA	-95	True	NA	NA	NA	3379139	3360410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373676_3379037
transcript_27328.known	chr11	-	2021	5	FSM	ENSG00000005801.18	ENST00000005082.13	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	172.672196661767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	35	True	NA	10	True	AATAAA	-40	NA	3379116	3358993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_27341.known	chr11	-	2970	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	52.1621403787161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	6	True	NA	-2	True	AATAAA	-15	NA	3379145	3357926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
transcript_27356.nnic	chr11	+	1721	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	27.8388218141501	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	NA	False	NA	24	True	AATGAA	-18	NA	3380910	3408978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
transcript_2737.known	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	118.354383104302	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	445	False	10472552	-14	True	AATAAA	-33	NA	10472529	10456521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_27381.nic	chr11	-	623	2	ISM	ENSG00000255367.3	ENST00000527970.1	983	5	-69	26608	-69	-148	5prime_fragment	FALSE	canonical	2	17	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGCCATTATTGCTCAT	NA	False	NA	-21	True	TTTAAA	-5	NA	3581280	3508127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_3508397_3580926
transcript_27384.known	chr11	-	1232	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	5.18544972870135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
transcript_27388.known	chr11	-	1154	4	FSM	ENSG00000167311.14	ENST00000397067.7	1154	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	22.4251842554055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3638920_3639002_3639036_3639845_3640372_3641805
transcript_27393.known	chr11	-	7023	33	FSM	ENSG00000110713.17	ENST00000359171.8	7023	33	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_23	62.923991536913	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCTTTCCCTTTGTATT	7	False	NA	-1	True	AATAAA	-25	NA	3797792	3675010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760487_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_27394.known	chr11	-	6726	33	FSM	ENSG00000110713.17	ENST00000324932.12	6726	33	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_23	44.4957753437054	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTATTGGCTTTCCC	-10	True	NA	-9	True	AATAAA	-17	NA	3797554	3675018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_27409.known	chr11	-	3923	20	FSM	ENSG00000110713.17	ENST00000397004.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	38.2375574968394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGATGGCCTTATTTT	3	True	NA	NA	False	TATAAA	-22	NA	3797541	3711552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_27420.known	chr11	+	1837	7	FSM	ENSG00000148985.20	ENST00000396986.6	1837	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	98.3796501089303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	NA	False	NA	0	True	NA	NA	NA	3797818	3826334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_27428.known	chr11	+	863	6	FSM	ENSG00000148985.20	ENST00000464229.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	112.15988587726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAAACATCACCTTTAC	6	True	NA	NA	False	NA	NA	NA	3797923	3825652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_27429.known	chr11	+	894	6	FSM	ENSG00000148985.20	ENST00000479072.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	110.293426821366	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGGGTGTAGGCCAA	26	True	NA	NA	False	NA	NA	NA	3808593	3825578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_2743.known	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	55.599010782567	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	17	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_27432.known	chr11	+	699	5	FSM	ENSG00000148985.20	ENST00000464441.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	115.914569834857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACCTTTCACTGAGGT	54	False	NA	NA	False	NA	NA	NA	3797971	3825777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3797983_3808293_3808316_3824269_3824377_3825019_3825129_3825327
transcript_27439.known	chr11	+	1530	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	74.2710407897991	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	26	True	NA	-4	True	NA	NA	NA	3808593	3826330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_27442.nic	chr11	+	1694	5	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	107.225230239902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	487	False	NA	18	True	AATAAA	-18	NA	3808530	3826352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_3808652_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_27445.nic	chr11	+	1749	4	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	-10	0	intron_retention	FALSE	canonical	3	84	junction_1	83.7416662520317	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	487	False	NA	18	True	AATAAA	-18	NA	3808530	3826352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_3808652_3823882_3824377_3825019_3825129_3825327
transcript_27446.nnic	chr11	+	1357	4	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	109.045352440573	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-32	True	NA	18	True	AATAAA	-18	NA	3808535	3826352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_3808652_3824269_3824377_3825019_3825129_3825327
transcript_27449.known	chr11	+	1963	7	FSM	ENSG00000148985.20	ENST00000278243.9	1963	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	99.984582144782	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGGGCTCATCTTGTT	-8	True	NA	37	True	AATAAA	-37	NA	3808559	3826371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3808652_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_27450.known	chr11	-	1295	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCTCCTCCCTGTGT	-3	True	NA	-8	True	AATAAA	-18	NA	3840959	3826977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3828207_3840893
transcript_27453.nnic	chr11	+	4421	13	Fusion	ENSG00000229368.1_ENSG00000167323.12	novel	4168	13	NA	NA	-515	0	multi-exon	TRUE	non_canonical	0	0	junction_1	15.8926520407668	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGCTTTGACTCTCAT	498	False	NA	20	True	AATAAA	-22	NA	3855148	4093208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_3855473_3855641_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4086476_4086544_4091281
transcript_27458.known	chr11	+	4038	12	FSM	ENSG00000167323.12	ENST00000300737.8	4038	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	9.17956768099224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTTGACTCTCATT	33	True	NA	21	True	AATAAA	-23	NA	3855701	4093209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4086476_4086544_4091281
transcript_27459.known	chr11	+	4168	13	FSM	ENSG00000167323.12	ENST00000526596.2	4168	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	15.8120470949632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGCTTTGACTCTCAT	-5	True	NA	20	True	AATAAA	-22	NA	3855663	4093208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4084672_4084766_4086476_4086544_4091281
transcript_27461.known	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_15	82.4090407661684	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	2	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_27471.known	chr11	+	583	4	FSM	ENSG00000167325.15	ENST00000526350.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_1	65.7081087504088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTTTTAATAATGCA	2	True	NA	NA	False	AATAAA	-39	NA	4094851	4107570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434
transcript_27472.known	chr11	+	462	2	FSM	ENSG00000254480.2	ENST00000525365.1	462	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCAACTTGATCTTTG	7465	False	NA	NA	False	ATTAAA	-20	NA	4187139	4202655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_4187205_4202258
transcript_27474.known	chr11	-	1935	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	6.94422221866655	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTCTATCCCATTCAG	-16	True	NA	-18	True	AATAAA	-23	NA	4393702	4384896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
transcript_27477.known	chr11	-	3187	7	FSM	ENSG00000167333.13	ENST00000531101.5	3187	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.2592053367191	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGGAATATTAAAAATTG	-6	True	NA	-110	True	NA	NA	NA	4608204	4598779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602407_4603240_4603341_4605078_4605562_4608026
transcript_27479.nnic	chr11	-	2253	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11121	-4114	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATACATTTTCAGAGT	NA	False	NA	NA	False	AATAAA	-10	NA	5165878	5150937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_27481.nnic	chr11	-	1708	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11053	-4591	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTACATGCTTTTTTCTT	NA	False	NA	-6	True	CATAAA	-16	NA	5165810	5151414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_27487.known	chr11	+	3217	8	FSM	ENSG00000121236.21	ENST00000278302.9	3217	8	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_3	35.6891340006211	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-4	True	NA	7	True	AATAAA	-18	NA	5596108	5612952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_27491.known	chr11	+	3422	8	FSM	ENSG00000121236.21	ENST00000380097.8	3422	8	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	49.9052162829187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-30	True	NA	7	True	AATAAA	-18	NA	5596636	5612952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5596915_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_27494.known	chr11	+	2293	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.01695886884898	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	-8	True	NA	15	True	AATAAA	-26	NA	5625000	5644398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
transcript_27498.known	chr11	-	3364	8	FSM	ENSG00000132256.20	ENST00000380034.8	3364	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	11.7351730159502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGGGGTAATCCATTA	-13	True	NA	33	True	TTTAAA	-41	NA	5685074	5663194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_27499.known	chr11	-	2862	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	18.3213937621502	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAAGCATCTATCTAA	-36	True	NA	-18	True	AATAAA	-8	NA	5685097	5663571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_275.known	chr1	-	4152	1	FSM	ENSG00000223764.2	ENST00000609207.1	4152	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATTACAGAGTCATTCA	4596	False	NA	1	True	AATAAA	-27	NA	921016	916864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_916900_921000
transcript_27501.known	chr11	-	2290	11	FSM	ENSG00000132256.20	ENST00000380027.5	2290	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.0795674882716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATCTAAGTGTCTTGA	NA	False	NA	-9	True	AATAAA	-17	NA	5872358	5663562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5664174_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015_5685395_5855751_5855855_5861164_5861362_5872314
transcript_27504.known	chr11	-	2669	7	FSM	ENSG00000132256.20	ENST00000682968.1	2669	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	35.1899606895679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTATATTTATTATTT	-38	True	NA	-68	True	AAAACA	-18	NA	5685099	5663665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5665396_5665655_5665683_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_27505.known	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_3	25.9968600929781	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	-38	True	NA	13	True	AATAAA	-17	NA	5689789	5710863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_27513.known	chr11	+	1333	2	FSM	ENSG00000180988.3	ENST00000317037.3	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAATATGTCAATTTTC	NA	False	NA	NA	False	AATAAA	-44	NA	5808923	5821483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5809055_5820281
transcript_27518.nnic	chr11	-	3403	12	NNC	ENSG00000051009.11	novel	3364	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	63.6173997717528	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	6	False	NA	-13	True	TATAAA	-14	NA	6234652	6211344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6211868_6214410_6214574_6214709_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_27520.known	chr11	-	3481	12	FSM	ENSG00000051009.11	ENST00000265978.8	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	54.6482364954819	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	NA	False	NA	-13	True	TATAAA	-14	NA	6234711	6211344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_27523.nnic	chr11	-	3364	12	NNC	ENSG00000051009.11	novel	3364	12	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	61.4067861757131	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	NA	False	NA	-13	True	TATAAA	-14	NA	6234683	6211344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224661_6234543
transcript_27524.known	chr11	-	3364	12	FSM	ENSG00000051009.11	ENST00000449352.7	3364	12	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_3	47.521026229284	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-1	True	NA	-13	True	TATAAA	-14	NA	6234636	6211344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_27538.nnic	chr11	-	3288	11	NIC	ENSG00000051009.11	novel	3364	12	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	60.7651215747982	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	11	False	6234658	-13	True	TATAAA	-14	NA	6234647	6211344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_27546.nic	chr11	-	3399	9	ISM	ENSG00000051009.11	ENST00000265978.8	3481	12	52	5191	4	34	5prime_fragment	FALSE	canonical	3	38	junction_1	59.2874354311266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCTCTGAGAAGTAGTA	-1	True	NA	NA	False	AAAACA	-27	NA	6234659	6216535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_27547.known	chr11	-	3327	9	FSM	ENSG00000051009.11	ENST00000524416.1	3327	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	49.1958776220122	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAACCAACC	-5	True	NA	NA	False	NA	NA	NA	6234663	6216569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_27553.known	chr11	+	1916	6	FSM	ENSG00000132259.13	ENST00000379936.3	1916	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.56124969497314	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCATCCTGTCTGCGA	3	True	NA	NA	False	AGTAAA	-16	NA	6239088	6244479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6239269_6239383_6239486_6239683_6239791_6240065_6240712_6241430_6241781_6243948
transcript_27566.known	chr11	+	2019	5	FSM	ENSG00000110148.10	ENST00000334619.7	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	1855	junction_4	114.326287440816	6706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	-14	True	NA	19	True	AATAAA	-21	NA	6259837	6272127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645_6270804_6271010
transcript_27575.known	chr11	+	2138	4	FSM	ENSG00000110148.10	ENST00000525462.1	2138	4	0	0	0	0	multi-exon	FALSE	canonical	3	1869	junction_2	104.499867091888	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	74	False	NA	19	True	AATAAA	-21	NA	6259925	6272127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645
transcript_27580.known	chr11	+	1734	4	FSM	ENSG00000110148.10	ENST00000532715.5	1734	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	933.80333404131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCTCTCCTTCCTTA	90	False	NA	-46	True	NA	NA	NA	6259805	6272062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6260080_6270087_6270338_6270645_6270804_6271010
transcript_27585.known	chr11	+	792	2	FSM	ENSG00000110148.10	ENST00000525014.1	792	2	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACACTGTCGTGCAACCA	23	False	NA	NA	False	NA	NA	NA	6259874	6270255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6260080_6269668
transcript_2759.known	chr1	-	4405	16	FSM	ENSG00000130940.15	ENST00000344008.5	4405	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	9.2750561543673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCCTGAGTGGCAGCTG	-3	True	NA	-9	True	AATAAA	-22	NA	10796650	10647212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10648140_10649069_10649193_10649282_10649438_10650691_10650756_10650940_10651077_10653376_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10705491_10705545_10760700_10760858_10796563
transcript_27590.known	chr11	-	957	3	FSM	ENSG00000170955.10	ENST00000530979.1	957	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTGCTTGTGCCTTGT	86	False	NA	-54	True	NA	NA	NA	6320532	6319143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6319565_6319656_6319753_6320092
transcript_27591.known	chr11	-	1025	2	FSM	ENSG00000170955.10	ENST00000532354.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	10	True	NA	-31	True	AATAAA	-17	NA	6320062	6318945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6319565_6319656
transcript_27592.known	chr11	-	1028	2	FSM	ENSG00000170955.10	ENST00000303927.4	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	0	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	11	True	NA	-31	True	AATAAA	-17	NA	6320501	6318945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6319565_6320092
transcript_27594.known	chr11	-	605	2	FSM	ENSG00000170955.10	ENST00000524852.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTCCCAAAATAAATCC	463	False	NA	-40	True	NA	NA	NA	6320155	6319129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6319672_6320092
transcript_27598.known	chr11	+	2410	6	FSM	ENSG00000166311.10	ENST00000342245.9	2410	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	1.95959179422654	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGTGTGACTGTCCC	7	True	NA	8	True	AATAAA	-21	NA	6390473	6394996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6390917_6391383_6392157_6393215_6393388_6393616_6393694_6393895_6394042_6394197
transcript_27600.known	chr11	+	2446	6	FSM	ENSG00000166311.10	ENST00000534405.5	2446	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5.45527267879434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGACCCCTGTGTGACT	6	True	NA	3	True	AATAAA	-16	NA	6390472	6394991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6390917_6391383_6392197_6393215_6393388_6393616_6393694_6393895_6394042_6394197
transcript_27605.known	chr11	-	2221	15	FSM	ENSG00000166313.20	ENST00000608435.5	2221	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	154.753078502893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	13	True	NA	-37	True	AATAAA	-16	NA	6419071	6395124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395280_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_27614.known	chr11	-	1920	14	FSM	ENSG00000166313.20	ENST00000608655.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	156.112082327156	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	8970	False	NA	-37	True	AATAAA	-16	NA	6404843	6395124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6404744
transcript_27615.known	chr11	-	2095	14	FSM	ENSG00000166313.20	ENST00000608704.5	2095	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	157.066450340247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	8153	False	NA	-37	True	AATAAA	-16	NA	6405660	6395124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6405386
transcript_27618.known	chr11	-	2636	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_4	19.9362890554329	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	14	True	NA	-37	True	AATAAA	-16	NA	6419070	6395124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_27619.known	chr11	-	2619	14	FSM	ENSG00000166313.20	ENST00000311051.7	2619	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	100.455235990315	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	2	True	NA	-37	True	AATAAA	-16	NA	6419414	6395124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6419345
transcript_27621.known	chr11	-	1626	13	FSM	ENSG00000166313.20	ENST00000530885.5	1626	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	100.885523683474	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGTCTAGAGGCTATTC	8915	False	NA	NA	False	ACTAAA	-15	NA	6404898	6395467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6404744
transcript_27622.known	chr11	-	2107	13	NNC	ENSG00000166313.20	novel	2128	15	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	140.400617282594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTCTTATGCCTGT	18	True	NA	-36	True	AATAAA	-17	NA	6405417	6395123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401695_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6405132
transcript_27623.nic	chr11	-	1939	13	NIC	ENSG00000166313.20	novel	2666	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	98.9877587830379	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-24	True	NA	-37	True	AATAAA	-16	NA	6419108	6395124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6418984
transcript_27648.known	chr11	-	2684	14	NNC	ENSG00000166313.20	novel	2666	15	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.583731167298	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTCTTATGCCTGT	-27	True	NA	-36	True	AATAAA	-17	NA	6419111	6395123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401695_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_27652.nnic	chr11	-	2891	13	NNC	ENSG00000110171.21	novel	3042	13	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	28.597299794833	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTGCTGGGTTCTTG	18	True	NA	-4	True	AATAAA	-14	NA	6473903	6448613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6467505_6467598_6473790
transcript_27654.known	chr11	-	3042	13	FSM	ENSG00000110171.21	ENST00000359518.7	3042	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	26.830745216801	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTTTTTGCTGGGTTC	7372	False	NA	-7	True	AATAAA	-11	NA	6473984	6448616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473083_6473249_6473790
transcript_27656.nnic	chr11	-	2831	12	NNC	ENSG00000110171.21	novel	3044	12	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	21.3433172230243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTGCTGGGTTCTTG	12	True	NA	-4	True	AATAAA	-14	NA	6473909	6448613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473764
transcript_27657.known	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_6	9.92534113742268	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-20	True	NA	-3	True	AATAAA	-15	NA	6473941	6448612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
transcript_27663.known	chr11	-	2704	11	FSM	ENSG00000110171.21	ENST00000536344.5	2704	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.9192496674806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTTTTTGCTGGGTTC	7372	False	NA	-7	True	AATAAA	-11	NA	6473984	6448616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458069_6458297_6473790
transcript_27668.nic	chr11	-	1822	9	NIC	ENSG00000132254.13	novel	1763	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	108.672601767879	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	0	True	NA	NA	False	AATAAA	-16	NA	6481356	6476518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6477269_6477717_6477893_6478040_6478199_6478578_6478653_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_2767.nic	chr1	-	4580	11	ISM	ENSG00000130940.15	ENST00000344008.5	4405	16	6	4578	2	1193	5prime_fragment	FALSE	canonical	2	12	junction_8	9.46625585963109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTACAGCACCTTGGGG	3	True	NA	NA	False	AATAAA	-33	NA	10796644	10651790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10705491_10705545_10760700_10760858_10796563
transcript_27673.known	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	48.7258050896304	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	14	True	NA	NA	False	NA	NA	NA	6481312	6475679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_27677.known	chr11	-	1430	7	FSM	ENSG00000132254.13	ENST00000423813.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	95.4474841062991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGGTGTGCTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	6481434	6476813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6481230
transcript_27687.known	chr11	-	1763	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_7	38.9887477226391	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-5	True	NA	NA	False	AATAAA	-16	NA	6481331	6476518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
transcript_27688.known	chr11	+	608	4	FSM	ENSG00000132286.12	ENST00000533379.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	291.326086866399	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGTGGTTGTCTT	24	True	NA	NA	False	AGTAAA	-12	NA	6481507	6483058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6481556_6481756_6481853_6482044_6482290_6482839
transcript_27690.known	chr11	+	2788	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	68.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	17	True	NA	12	True	AATAAA	-17	NA	6481500	6484681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6481556_6481756_6481853_6482044
transcript_27692.known	chr11	+	2557	3	FSM	ENSG00000179532.13	ENST00000533649.1	2557	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTTCTGTTCTTAA	NA	False	NA	7	True	AATATA	-16	NA	6546042	6549037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6547667_6547862_6548403_6548644
transcript_27693.nic	chr11	-	1750	7	NIC	ENSG00000132275.11	novel	6559	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	29.3636207273937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	3	True	NA	-5	True	AATAAA	-19	NA	6603606	6599919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602265_6603403
transcript_27694.known	chr11	-	6559	7	FSM	ENSG00000132275.11	ENST00000254605.11	6559	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	6.03922364399781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATGTATAATATATAATA	-7	True	NA	NA	False	AATAAA	-18	NA	6603616	6595071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602216_6603403
transcript_2770.nic	chr1	-	3772	11	ISM	ENSG00000130940.15	ENST00000344008.5	4405	16	4	5388	0	383	5prime_fragment	FALSE	canonical	2	12	junction_8	9.46625585963109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCCATTTTTCTCTG	1	True	NA	NA	False	CATAAA	-18	NA	10796646	10652600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10705491_10705545_10760700_10760858_10796563
transcript_27700.known	chr11	+	1759	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	219.683800545744	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	1	True	NA	16	True	AATAAA	-15	NA	6603773	6610870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_27703.known	chr11	+	1692	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	155.99330024787	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	-15	True	NA	-21	True	NA	NA	NA	6603757	6610833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_27704.nnic	chr11	+	1828	13	NNC	ENSG00000166333.14	novel	2074	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	313.428841826799	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	NA	False	NA	16	True	AATAAA	-15	NA	6603713	6610870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_6603878_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_27709.known	chr11	-	3492	13	FSM	ENSG00000166340.18	ENST00000299427.12	3492	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	64.1133436449335	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGCCTCTCATTCGTT	-2	True	NA	-13	True	ATTAAA	-19	NA	6619422	6612767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_27719.known	chr11	+	1801	12	FSM	ENSG00000166333.14	ENST00000537806.5	1801	12	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	162.835565794464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGCCTGTCACAATAA	-29	True	NA	-19	True	NA	NA	NA	6603743	6610835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_27720.known	chr11	+	1594	12	FSM	ENSG00000166333.14	ENST00000526711.5	1594	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	317.081004849492	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGGGACATGGGGA	-1	True	NA	20	True	AATAAA	-19	NA	6603730	6610874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604225_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_27723.known	chr11	-	3288	12	FSM	ENSG00000166340.18	ENST00000643439.1	3288	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	85.7600920500308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTAGAATCGTGTCCTAT	NA	False	NA	-103	True	NA	NA	NA	6619448	6612857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6619195_6619268_6619383
transcript_2773.known	chr1	-	3279	9	FSM	ENSG00000130940.15	ENST00000496432.6	3279	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	9.92156741649221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGGGCCTGCGTCCAG	NA	False	NA	NA	False	NA	NA	NA	10694479	10652983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10694296
transcript_27738.known	chr11	-	3640	12	FSM	ENSG00000166340.18	ENST00000643479.1	3640	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.8785750569859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-9	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_27741.known	chr11	-	3787	11	FSM	ENSG00000166340.18	ENST00000646777.1	3787	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.8673027960862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-9	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_27743.known	chr11	-	5312	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_4	79.1596488117526	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-16	True	NA	-15	True	AATAAA	-17	NA	6612216	6606293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
transcript_27746.known	chr11	-	2290	4	FSM	ENSG00000166340.18	ENST00000645020.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	21.853044537445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGCCCATCCCTCAA	-9	True	NA	NA	False	NA	NA	NA	6619429	6616546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6617429_6617625_6618916_6619195_6619268_6619383
transcript_27747.known	chr11	-	996	3	FSM	ENSG00000166340.18	ENST00000531754.2	996	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTCATTCATTTTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	6619448	6618056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6618916_6619195_6619268_6619383
transcript_27748.known	chr11	+	2074	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_5	61.2535713244542	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	43	False	NA	16	True	AATAAA	-15	NA	6603815	6610870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_27749.known	chr11	-	2305	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	15.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGTACATGAATCC	-26	True	NA	NA	False	NA	NA	NA	6683340	6680384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6682403_6682746_6682816_6683122
transcript_27751.known	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	18	True	NA	-67	True	AATAGA	-4	NA	6683296	6681950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6682403_6682746
transcript_27752.known	chr11	+	1503	8	FSM	ENSG00000149054.16	ENST00000610573.4	1503	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	21.1650462714701	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATTAGAGGCACCCAC	-19	True	NA	NA	False	NA	NA	NA	6926422	6984238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
transcript_27753.known	chr11	+	3655	7	FSM	ENSG00000149054.16	ENST00000278319.10	3655	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	5.03322295684717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCATCCTTTATAT	-16	True	NA	9	True	ATTAAA	-16	NA	6926425	6958047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
transcript_27757.known	chr11	+	2150	7	FSM	ENSG00000149054.16	ENST00000636097.1	2150	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	30.5122926047847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGAACACAAGGTCAGGA	-18	True	NA	NA	False	NA	NA	NA	6926423	6988930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6926862_6927661_6927808_6932093_6932673_6941570_6941654_6943545_6943642_6955689_6955783_6988215
transcript_27760.known	chr11	+	1452	5	FSM	ENSG00000149054.16	ENST00000529755.1	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	28.3813318926368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAATGTTATCAATGTG	21	True	NA	NA	False	AAAAAG	-19	NA	6926462	6956110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6955689
transcript_27764.known	chr11	-	4892	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTAGAGGAGTCTT	1	True	NA	NA	False	AATAAA	-22	NA	7020346	6997084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7001556_7002708_7002856_7020072
transcript_27765.known	chr11	+	4002	7	FSM	ENSG00000170743.17	ENST00000318881.11	4002	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	2.70801280154532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCTTGTCTTATTTAA	-9	True	NA	27	True	AGTAAA	-18	NA	7251903	7469043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7252332_7303038_7303391_7313394_7313942_7416041_7416163_7417956_7418129_7420505_7420636_7466791
transcript_27766.known	chr11	+	3183	6	FSM	ENSG00000170743.17	ENST00000532592.1	3183	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.97996655509042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTCCAACCTTGTCTT	194	False	NA	21	True	AGTAAA	-12	NA	7252169	7469037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7252332_7303038_7303391_7416041_7416163_7417956_7418129_7420505_7420636_7466791
transcript_27768.nic	chr11	+	3555	26	NIC	ENSG00000166387.14	novel	3274	27	NA	NA	-26	59	combination_of_known_junctions	TRUE	canonical	3	18	junction_24	95.8362436659534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCGAAAAACTGTTTTGA	NA	False	NA	NA	False	CATAAA	-17	NA	7513741	7657186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023_7653201_7655432_7655499_7656726
transcript_27771.known	chr11	+	3328	24	FSM	ENSG00000166387.14	ENST00000299492.9	3328	24	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	84.2673977818379	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	5	True	NA	29	True	AATAAA	-20	NA	7513998	7653756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_27782.known	chr11	+	2965	20	FSM	ENSG00000166387.14	ENST00000530181.5	2965	20	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	20.5478968870781	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTCACCATATCTTTAA	8	True	NA	33	True	AATAAA	-24	NA	7605737	7653760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7606016_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_27799.known	chr11	-	1338	10	FSM	ENSG00000166394.15	ENST00000524790.5	1338	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	154.244955096883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGTGTGGCTCTG	11	True	NA	-3	True	AATAAA	-20	NA	7673472	7665099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7665547_7665826_7665940_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_27802.known	chr11	-	1249	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	103.418748300296	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-17	True	NA	-7	True	AATAAA	-16	NA	7673500	7665103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_27804.known	chr11	-	1658	9	FSM	ENSG00000166394.15	ENST00000533558.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	106.961952931872	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	36	True	NA	-7	True	AATAAA	-16	NA	7674208	7665103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673717
transcript_27805.nic	chr11	-	1305	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_8	89.3220997290144	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-5	True	NA	-7	True	AATAAA	-16	NA	7674249	7665103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
transcript_27806.nic	chr11	-	1298	9	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_8	74.4579369510061	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	2889	False	NA	-7	True	AATAAA	-16	NA	7674356	7665103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
transcript_27822.known	chr11	-	2503	8	FSM	ENSG00000254951.7	ENST00000527847.5	2503	8	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_2	5.99319341811515	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAAACAAACAAAAA	305	False	NA	NA	False	NA	NA	NA	7905955	7850750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7852325_7854882_7854964_7879006_7879084_7879594_7879760_7881088_7881150_7881955_7882074_7882859_7882934_7905602
transcript_27833.known	chr11	+	6920	8	FSM	ENSG00000175390.15	ENST00000651655.1	6920	8	0	0	0	0	multi-exon	FALSE	canonical	3	2169	junction_2	108.21784529742	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAACAATACCTTATAT	0	True	NA	NA	False	TATAAA	-20	NA	7987336	8001852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_27834.known	chr11	+	4308	8	FSM	ENSG00000175390.15	ENST00000678132.1	4308	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	862.738733597246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCACGCACCTG	7	True	NA	NA	False	AATACA	-12	NA	7987343	7999127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7987717_7991780_7991972_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_27836.known	chr11	+	844	8	FSM	ENSG00000175390.15	ENST00000531329.6	844	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	851.57180003347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCATCTTATGTGAG	3	True	NA	-4	True	AATAAA	-21	NA	7987339	7996167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7987374_7991825_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_27838.known	chr11	-	2929	6	FSM	ENSG00000166405.15	ENST00000343202.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	13.1969693490589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	NA	False	NA	NA	False	GATAAA	-1	NA	8169055	8108941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
transcript_27839.nic	chr11	-	789	3	ISM	ENSG00000166405.15	ENST00000528463.5	1211	7	-40	28972	-5	-583	5prime_fragment	FALSE	canonical	3	47	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATCTTTACAGGCCGA	-31	False	NA	NA	False	NA	NA	NA	8169048	8139636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_8140194_8153374_8153424_8168865
transcript_27840.known	chr11	-	1300	2	FSM	ENSG00000166405.15	ENST00000419822.2	1300	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTACTTTCTGCAGAA	-8	True	NA	NA	False	CATAAA	-42	NA	8169025	8139053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8140194_8168865
transcript_27841.known	chr11	-	1294	4	FSM	ENSG00000166407.14	ENST00000335790.8	1294	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACTCTGCGTTGTTCAC	-1	True	NA	NA	False	ATTAAA	-20	NA	8263878	8224308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8263337
transcript_27842.known	chr11	-	1038	4	FSM	ENSG00000166407.14	ENST00000428101.6	1038	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGGTTACTCTGCGTTG	386	False	NA	NA	False	ATTAAA	-15	NA	8268716	8224313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8268426
transcript_27854.nnic	chr11	-	2522	13	NIC	ENSG00000130413.16	novel	2558	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_12	15.7524248574272	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-40	True	NA	-7	True	AATAAA	-19	NA	8594259	8391870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
transcript_27859.known	chr11	-	786	7	FSM	ENSG00000166436.17	ENST00000644261.1	786	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.06718737290547	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGACATGGGCATGAGC	-3	True	NA	NA	False	NA	NA	NA	8682694	8672016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8672099_8672247_8672386_8674805_8674884_8678133_8678170_8679619_8679815_8679900_8680064_8682600
transcript_27874.known	chr11	-	4341	20	FSM	ENSG00000166444.19	ENST00000313726.11	4341	20	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_19	31.8368416702195	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCATGTGTTCCTTGGCT	9	True	NA	-17	True	AATAAA	-26	NA	8810674	8693351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8750620_8750726_8810516
transcript_27878.nic	chr11	-	4246	19	NIC	ENSG00000166444.19	novel	4341	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_18	37.6030271962376	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCATGTGTTCCTTGGC	-2	True	NA	-18	True	AATAAA	-25	NA	8810685	8693352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8810516
transcript_27879.known	chr11	-	2679	19	FSM	ENSG00000166444.19	ENST00000530438.5	2679	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_17	35.2480189444197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTTCTCAGTAGCAGA	192	False	NA	NA	False	AATGAA	-23	NA	8811016	8694095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8750620_8750726_8810516
transcript_27893.nnic	chr11	+	1163	6	NNC	ENSG00000166441.13	novel	4535	5	NA	NA	-43	1682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2757.89199208381	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGTGACTTTTAGTC	436	False	NA	9	True	ATTAAA	-27	NA	8682744	8687530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677_8686271_8687347
transcript_27894.nnic	chr11	+	1159	6	NNC	ENSG00000166441.13	novel	4535	5	NA	NA	-43	1682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2757.89199208381	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGTGACTTTTAGTC	436	False	NA	9	True	ATTAAA	-27	NA	8682744	8687530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677_8686283_8687363
transcript_27897.known	chr11	+	4535	5	FSM	ENSG00000166441.13	ENST00000314138.11	4535	5	0	0	0	0	multi-exon	FALSE	canonical	3	3888	junction_1	1363.25738123804	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGACTAATCCCACTTA	17	True	NA	NA	False	NA	NA	NA	8682791	8689872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677
transcript_27899.known	chr11	+	406	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	2784.95550907012	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	17	True	NA	29	True	ATTAAA	-17	NA	8682791	8685848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
transcript_27901.known	chr11	+	558	5	FSM	ENSG00000166441.13	ENST00000524496.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2812.81002735698	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	14	True	NA	28	True	ATTAAA	-16	NA	8682788	8685847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8682817_8683201_8683266_8683960_8684082_8684717_8684893_8685677
transcript_27902.known	chr11	+	878	4	FSM	ENSG00000166441.13	ENST00000530022.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	6431	junction_3	366.756352667847	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	35	False	NA	29	True	ATTAAA	-17	NA	8682809	8685848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8683266_8684005_8684082_8684717_8684893_8685677
transcript_27903.known	chr11	+	297	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3596.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	200	False	NA	28	True	ATTAAA	-16	NA	8683214	8685847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8683266_8684005_8684082_8685677
transcript_27904.known	chr11	+	1273	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	80.8099003835545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	-3	True	NA	14	True	AATAAA	-17	NA	8911188	8920079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_27906.known	chr11	+	1247	5	FSM	ENSG00000166452.12	ENST00000299576.9	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	84.8807987709824	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	17	False	NA	19	True	AATAAA	-22	NA	8911138	8920084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286_8917368_8919336
transcript_27908.known	chr11	+	1022	5	FSM	ENSG00000166452.12	ENST00000534147.5	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	70.8007768318964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCTCGTGATCCACC	155	False	NA	NA	False	NA	NA	NA	8911442	8919862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_27910.known	chr11	+	1128	4	FSM	ENSG00000166452.12	ENST00000525005.5	1128	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	69.5317673201729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAACATACACATTTGGTG	0	True	NA	NA	False	NA	NA	NA	8911191	8917748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286
transcript_27911.known	chr11	+	1084	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	61.478090044792	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGATTACAGGCGTGA	50	False	NA	NA	False	NA	NA	NA	8911337	8919900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
transcript_27913.known	chr11	+	1421	3	FSM	ENSG00000166452.12	ENST00000529876.5	1421	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	68	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGGAGTTCTACAGC	-3	True	NA	NA	False	NA	NA	NA	8911188	8918119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8914825_8914931_8917286
transcript_27914.known	chr11	-	1844	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	22.4833271559171	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-22	True	NA	79	True	TATAAA	-17	NA	8964442	8947201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
transcript_27915.known	chr11	-	1433	5	FSM	ENSG00000175348.11	ENST00000525069.5	1433	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	60.3676237730126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCTGGATTGATAATAT	NA	False	NA	3	True	AATAAA	-23	NA	8965011	8947500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964889
transcript_27916.known	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	63.1682057859982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-21	True	NA	-13	True	AATAAA	-19	NA	8964441	8947293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
transcript_27917.nnic	chr11	-	3909	8	NNC	ENSG00000175352.11	novel	3761	7	NA	NA	-526	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	12.8142140466223	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	NA	False	NA	-4	True	AATAAA	-19	NA	9004575	8980575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761_9003923_9004348
transcript_27918.known	chr11	-	3761	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	6.49786289653931	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	0	True	NA	-4	True	AATAAA	-19	NA	9004001	8980575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
transcript_27925.known	chr11	-	1440	8	FSM	ENSG00000166471.11	ENST00000611268.4	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	98.0112446693371	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTTGGGATTT	940	False	NA	-8	True	AATAAA	-18	NA	9314567	9280656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_27928.known	chr11	-	3798	7	FSM	ENSG00000166471.11	ENST00000528080.6	3798	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	18.7409237291608	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	16	True	NA	-5	True	AATAAA	-21	NA	9314593	9280653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_2793.known	chr1	+	1031	7	FSM	ENSG00000120948.19	ENST00000629725.2	1031	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_6	514.994309569425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGCCATAGGAATAC	NA	False	NA	NA	False	NA	NA	NA	11012621	11023248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022251_11023192
transcript_27934.known	chr11	-	723	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTGCTGAACTAATT	-24	True	NA	NA	False	ATTAAA	-40	NA	9314633	9295095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9295388_9299583_9299702_9314320
transcript_27935.known	chr11	+	6162	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	47.3988506365573	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	9	True	NA	13	True	AATAAA	-22	NA	9384651	9448127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
transcript_27938.known	chr11	+	2900	16	FSM	ENSG00000166478.10	ENST00000396602.7	2900	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	20.1732496142788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	-7	True	NA	20	True	AATACA	-19	NA	9461011	9528524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_27942.known	chr11	+	2022	16	FSM	ENSG00000166478.10	ENST00000530463.5	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	32.3820251923124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCAGAACAATGGAGCAA	-5	True	NA	NA	False	NA	NA	NA	9460975	9527613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_27951.known	chr11	-	1147	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGGATTACTGTTTTTTG	NA	False	NA	-6	True	AATAAA	-14	NA	9460702	9459555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9459600_9460700
transcript_27952.known	chr11	+	3588	11	FSM	ENSG00000166483.12	ENST00000450114.7	3588	11	0	0	0	0	multi-exon	TRUE	canonical	3	596	junction_7	48.2937884204584	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTACTGAGTCACAG	-7	True	NA	NA	False	AATATA	-19	NA	9573669	9589985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9574510_9575887_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
transcript_27954.known	chr11	+	4884	12	FSM	ENSG00000133789.15	ENST00000318950.11	4884	12	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	54.2234434371501	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGTATCTATGTGTA	-32	True	NA	53	True	AATAAA	-16	NA	9664076	9752993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_27962.known	chr11	+	3538	11	FSM	ENSG00000133789.15	ENST00000447399.6	3538	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	129.60339501726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGTTGCCTTTATAA	-32	True	NA	-13	True	AATAAA	-19	NA	9664076	9751821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9664279_9694145_9694287_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_27968.known	chr11	+	3006	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_6	46.0487174088486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTACTTGGGAGGC	26	True	NA	NA	False	TTTAAA	-13	NA	9664134	9741953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
transcript_27971.known	chr11	+	3714	2	FSM	ENSG00000246273.8	ENST00000663578.1	3714	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTGAACACAAAATAAAAG	-37	True	NA	-28	True	NA	NA	NA	9758267	9811325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9758504_9807847
transcript_27973.known	chr11	+	867	5	FSM	ENSG00000148926.10	ENST00000525063.2	867	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.479307412344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGAGAAATGAATGCT	13	False	NA	NA	False	NA	NA	NA	10305087	10306908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331_10306649_10306769
transcript_27975.known	chr11	+	1492	4	FSM	ENSG00000148926.10	ENST00000278175.10	1492	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	20.9814733091416	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	-2	True	NA	34	True	AATAAA	-16	NA	10305072	10307397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331
transcript_27976.known	chr11	+	584	3	FSM	ENSG00000148926.10	ENST00000524948.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTGTTGGGGCCAAAGCT	2	True	NA	NA	False	NA	NA	NA	10305076	10306260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10305799_10305948
transcript_27978.known	chr11	+	1640	3	FSM	ENSG00000148926.10	ENST00000534464.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATTCTCTCGGCTCGG	-2	True	NA	32	True	AATAAA	-14	NA	10305072	10307395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10306099_10306331
transcript_27979.known	chr11	+	1839	2	FSM	ENSG00000148926.10	ENST00000530439.1	1839	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAACAGCAAACCAATAAA	-1	True	NA	-1	True	CATAAA	-12	NA	10305073	10307362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679
transcript_2798.known	chr1	+	4185	6	FSM	ENSG00000120948.19	ENST00000240185.8	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1258	junction_4	85.7983682828526	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	-5	True	NA	11	True	AATAAA	-20	NA	11012653	11025492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_27982.known	chr11	+	1889	3	FSM	ENSG00000148926.10	ENST00000528655.5	1889	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	22	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATATGCGAACAGCAAAC	9	False	NA	-8	True	CATAAA	-5	NA	10305083	10307355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305799_10305948_10306099_10306331
transcript_27983.known	chr11	+	3806	15	FSM	ENSG00000133805.16	ENST00000396554.7	3806	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	2.87139303460597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTTAAAGATTAATCT	-21	True	NA	NA	False	NA	NA	NA	10450680	10507018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10451044_10461514_10461741_10478525_10478731_10482062_10482226_10484819_10485040_10487234_10487365_10493348_10493544_10494898_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
transcript_27984.known	chr11	+	2753	15	FSM	ENSG00000133805.16	ENST00000528723.5	2753	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.9357078039874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTGTCTATACTTGTT	126	False	NA	NA	False	NA	NA	NA	10456185	10506111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10456403_10461514_10461741_10478525_10478731_10482062_10482226_10484819_10485040_10487234_10487365_10493348_10493544_10494898_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
transcript_27985.known	chr11	-	4049	6	FSM	ENSG00000110315.7	ENST00000265981.7	4049	6	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	21.1319663069957	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTAACTGCTAT	12	True	NA	-17	True	ATTAAA	-16	NA	10541187	10511672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_27997.known	chr11	+	4330	25	FSM	ENSG00000198730.9	ENST00000361367.7	4330	25	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_11	21.0474002089464	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	14	True	NA	10	True	AATAAA	-18	NA	10751245	10779746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
transcript_28.known	ERCC-00077	+	258	1	FSM	ERCC-00077A	DQ516742	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATAAA	-33	NA	0	258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00077_+_0_300
transcript_28019.known	chr11	-	3794	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	0	0	0	multi-exon	FALSE	canonical	3	5830	junction_4	473.615404120694	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	5	True	NA	-8	True	AATAAA	-16	NA	10808926	10797053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_2803.known	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2518	junction_2	68.1741467545747	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	21	True	NA	-6	True	NA	NA	NA	11060018	11054588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
transcript_28043.known	chr11	-	3346	21	FSM	ENSG00000110321.19	ENST00000396525.7	3346	21	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_8	1296.88493707036	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	279	False	NA	-74	True	NA	NA	NA	10808708	10797169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_28096.known	chr11	-	4001	22	FSM	ENSG00000110321.19	ENST00000526148.6	4001	22	0	0	0	0	multi-exon	TRUE	canonical	1	41	junction_21	1463.11589508452	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGTGGCTGTAAATG	1014	False	NA	-4	True	AATAAA	-20	NA	10807973	10797049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10807548
transcript_28097.known	chr11	+	1094	3	FSM	ENSG00000247271.8	ENST00000501079.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	-5	True	NA	13	True	AATAAA	-20	NA	10858216	10879272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10858352_10865260_10865328_10878380
transcript_28098.known	chr11	-	1512	3	FSM	ENSG00000236287.8	ENST00000526020.5	1512	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	57	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAAGTTATTTGTC	NA	False	NA	NA	False	AGTAAA	-19	NA	10858796	10854618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10855082_10856143_10856258_10857861
transcript_28099.known	chr11	-	2741	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	52.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATTATTGGTATTT	-14	False	NA	1	True	TTTAAA	-5	NA	10858073	10852703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10855119_10856143_10856258_10857861
transcript_28102.known	chr11	-	533	3	FSM	ENSG00000236287.8	ENST00000533925.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	67	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGGGTCTGGTGGACA	-14	False	NA	NA	False	NA	NA	NA	10858073	10849896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10850104_10856143_10856258_10857861
transcript_28104.known	chr11	-	2503	11	FSM	ENSG00000110328.6	ENST00000227756.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	5.17300686255103	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTGCAGTCATTTGGT	1	True	NA	-13	True	AATAAA	-16	NA	11622005	11270876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11271291_11293028_11293194_11327085_11327182_11332693_11332832_11340818_11341005_11372514_11372630_11377181_11377380_11379080_11379265_11432620_11432788_11448743_11448937_11621358
transcript_28109.known	chr11	+	9994	28	FSM	ENSG00000170242.19	ENST00000527733.7	9994	28	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_11	25.5726727430054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTCACTCAGGACTGA	-20	True	NA	NA	False	NA	NA	NA	11841971	11961887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
transcript_2811.known	chr1	-	2796	25	FSM	ENSG00000171824.14	ENST00000376936.9	2796	25	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_8	48.5188250979853	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-15	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_28113.known	chr11	+	7775	27	FSM	ENSG00000170242.19	ENST00000339865.9	7775	27	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	43.1299296127685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTGTGTAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	11841422	11959323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_11842225_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
transcript_28116.nic	chr11	+	3163	20	ISM	ENSG00000170242.19	ENST00000527733.7	9994	28	-29	18946	3	-208	5prime_fragment	FALSE	canonical	3	174	junction_11	25.1120480735593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAACGAAAGCAAATGAA	450	False	NA	NA	False	NA	NA	NA	11841942	11942941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334
transcript_28129.known	chr11	-	9549	8	FSM	ENSG00000050165.19	ENST00000396505.7	9549	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	51.5985286928349	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCCAGGGAAAATGCTA	757	False	NA	NA	False	ATTAAA	-8	NA	12009082	11956206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12008869
transcript_28130.nic	chr11	-	2797	8	NIC	ENSG00000050165.19	novel	2636	8	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	62.8282401082669	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGTTCTTGGATTT	441	False	NA	-7	True	TATAAA	-45	NA	12009398	11963105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12009038
transcript_28131.known	chr11	-	2636	8	FSM	ENSG00000050165.19	ENST00000326932.8	2636	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	38.2414456220644	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGTTCTTGGATTT	469	False	NA	-7	True	TATAAA	-45	NA	12009370	11963105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12009171
transcript_28136.nnic	chr11	-	1530	4	NNC	ENSG00000050165.19	novel	1087	3	NA	NA	-42	814	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	84.194219912454	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTAGTTCTCAACTGG	427	False	NA	-4	True	AATAAA	-18	NA	12009412	12000860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_12001773_12002299_12002438_12008369_12008609_12009171
transcript_28137.known	chr11	-	2525	7	FSM	ENSG00000050165.19	ENST00000683431.1	2525	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	14.3265487818944	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAATAGAAACAACCTGT	-16	True	NA	63	True	AATAAA	-26	NA	12008626	11963035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369
transcript_28138.known	chr11	+	536	4	FSM	ENSG00000133816.18	ENST00000534563.5	536	4	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCGAGGGACCTGTGT	18	False	NA	NA	False	NA	NA	NA	12242320	12259942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_12242433_12256784_12256972_12258467_12258557_12259794
transcript_28139.known	chr11	+	8627	13	FSM	ENSG00000197702.14	ENST00000334956.15	8627	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	8.21034239372648	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTTTCTCTCCCAT	-11	True	NA	38	True	ATTAAA	-45	NA	12377570	12535356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846_12477950_12496457_12496599_12504313_12504430_12508583_12508643_12511513_12511534_12513298_12513361_12513996_12514066_12517609_12517712_12518444_12518518_12527848
transcript_28144.known	chr11	+	3345	4	FSM	ENSG00000197702.14	ENST00000530755.5	3345	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	10.1434160364686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-19	True	NA	NA	False	NA	NA	NA	12377562	12480809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846
transcript_28147.known	chr11	+	9417	13	FSM	ENSG00000187079.20	ENST00000527636.7	9417	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.55103252126293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTATCTGCAGAAGT	1	True	NA	19	True	AATAAA	-21	NA	12674420	12944737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_12674835_12675408_12675562_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
transcript_28153.nic	chr11	+	2614	12	NIC	ENSG00000187079.20	novel	9417	13	NA	NA	-41	-1019	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	10.5470218271078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTTTTTGCAATAAGT	8	False	NA	NA	False	AAAAAG	-7	NA	12674379	12938046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_12674835_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
transcript_28158.nic	chr11	+	1653	4	ISM	ENSG00000187079.20	ENST00000527636.7	9417	13	-41	81699	-41	-2501	5prime_fragment	FALSE	canonical	3	20	junction_1	14.7271480229163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAAAACCTCATGGGTG	8	False	NA	NA	False	AAAAAG	-19	NA	12674379	12863038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_12674835_12675408_12675562_12764178_12764435_12862249
transcript_28161.known	chr11	+	2804	1	FSM	ENSG00000189431.8	ENST00000529419.3	2804	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTCTAACTTCAGTATGT	-2	True	NA	NA	False	ATTAAA	-33	NA	13009315	13012119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13009300_13012100
transcript_28162.known	chr11	+	2766	21	FSM	ENSG00000133794.20	ENST00000673888.1	2766	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	14.6901327427631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTGTTCACATTTCA	53	False	NA	NA	False	AATAAA	-17	NA	13277877	13387262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_28163.known	chr11	+	2776	20	FSM	ENSG00000133794.20	ENST00000389707.8	2776	20	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	13.9895093263179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTCACATTTCAAATA	-27	True	NA	NA	False	AATAAA	-21	NA	13277797	13387266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_28164.known	chr11	+	2745	20	FSM	ENSG00000133794.20	ENST00000673892.1	2745	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	12.9064393728603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTTCACATTTCAA	17	True	NA	NA	False	AATAAA	-18	NA	13277841	13387263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_28166.known	chr11	+	2728	19	FSM	ENSG00000133794.20	ENST00000403510.8	2728	19	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	9.52854710207927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTGTTCACATTTCA	-35	True	NA	NA	False	AATAAA	-17	NA	13277789	13387262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_28167.known	chr11	+	2641	18	FSM	ENSG00000133794.20	ENST00000529388.6	2641	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.2199911531727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTTCACATTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	13277751	13387263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_28168.known	chr11	-	2439	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	54.4149278691059	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAACCACATTGACCAG	12	True	NA	-18	True	AATAAA	-30	NA	13463222	13388007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
transcript_28169.known	chr11	-	1662	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_7	22.0611395342811	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTTTTAAAGACCAAAG	-63	True	NA	NA	False	NA	NA	NA	13463297	13388701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
transcript_28173.known	chr11	+	5266	12	FSM	ENSG00000197601.13	ENST00000354817.8	5266	12	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_6	32.450852858433	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	-8	True	NA	21	True	ATTAAA	-22	NA	13668667	13732346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965_13713034_13714508_13714681_13721729_13721860_13727555_13727684_13728611
transcript_28182.known	chr11	+	1109	8	FSM	ENSG00000197601.13	ENST00000532701.1	1109	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_6	35.4014873433652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCTGAAGTTTTAATGT	-4	True	NA	NA	False	AATAAA	-15	NA	13668710	13713084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965
transcript_28183.known	chr11	+	5052	16	FSM	ENSG00000262655.4	ENST00000576479.4	5052	16	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	2.74873708374511	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATATTGAACATATT	3	True	NA	NA	False	AATAAA	-24	NA	13962722	14268133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13963143_13982846_13982954_14041520_14041655_14075344_14075419_14079898_14080022_14135419_14135569_14243331_14243397_14254527_14254730_14255646_14255788_14256616_14256693_14257715_14257899_14259279_14259451_14259533_14259702_14260587_14260753_14262711_14262976_14265523
transcript_28197.known	chr11	-	732	6	FSM	ENSG00000133818.14	ENST00000531807.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_5	366.437661819852	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAGAACCAACACGGAA	NA	False	NA	NA	False	NA	NA	NA	14342094	14279396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14341809
transcript_28198.known	chr11	-	982	6	FSM	ENSG00000133818.14	ENST00000532814.5	982	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	467.557654198923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATGTCTATATACACA	-1	True	NA	NA	False	TTTAAA	-43	NA	14358485	14279109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358237
transcript_28199.known	chr11	-	2343	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_5	142.34240408255	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-28	True	NA	-16	True	ATTAAA	-19	NA	14359183	14277921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
transcript_28209.known	chr11	-	1884	5	FSM	ENSG00000133818.14	ENST00000414023.6	1884	5	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_1	60.6506389084237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCAGGTGCTAGAAT	NA	False	NA	-58	True	NA	NA	NA	14295859	14277963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767
transcript_28211.known	chr11	-	1266	11	FSM	ENSG00000129084.18	ENST00000418988.2	1266	11	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_10	607.570086492085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGAGTTTTTTCCAA	1080	False	NA	24	True	NA	NA	NA	14643617	14505063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14610965_14611152_14643454
transcript_28212.nic	chr11	-	1620	10	NIC	ENSG00000129084.18	novel	1195	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	49	junction_9	472.152700764812	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-19	True	NA	-2	True	AATAAA	-20	NA	14520387	14504875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519872
transcript_28213.known	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	455.314055228794	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	5	True	NA	-39	True	NA	NA	NA	14520363	14504912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
transcript_28215.known	chr11	-	1195	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	0	0	0	multi-exon	FALSE	canonical	3	1328	junction_9	119.88420338903	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-18	True	NA	-2	True	AATAAA	-20	NA	14520386	14504875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
transcript_2822.known	chr1	-	2721	24	FSM	ENSG00000171824.14	ENST00000304457.11	2721	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	146.704814022809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-15	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_28225.known	chr11	-	479	2	FSM	ENSG00000129084.18	ENST00000528018.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGCTAGAAAACAAAAAGAG	14	True	NA	NA	False	AAAACA	-36	NA	14643635	14610853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14611152_14643454
transcript_28227.known	chr11	-	3481	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_21	110.629860283716	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAATGGATTTCTTTTAG	0	True	NA	-9	True	AATAAA	-23	NA	14499852	14457505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
transcript_28229.known	chr11	-	3336	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_21	68.5896139906932	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	0	True	NA	-15	True	AATAAA	-17	NA	14499811	14457511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_28230.nic	chr11	-	3355	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_21	96.8432588260296	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-13	True	NA	-15	True	AATAAA	-17	NA	14499865	14457511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_28235.nic	chr11	-	2178	15	ISM	ENSG00000129083.13	ENST00000439561.7	3336	22	-52	11825	-1	4673	5prime_fragment	FALSE	canonical	3	306	junction_14	52.5635184266403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGGTATATATGATGAG	-11	True	NA	-1	True	NA	NA	NA	14499863	14469336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_28237.known	chr11	+	5995	16	FSM	ENSG00000152270.9	ENST00000282096.9	5995	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	9.6999427260623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGATTTGAAAGCTGT	7	True	NA	9	True	CATAAA	-18	NA	14643803	14872044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_14645054_14771936_14771988_14786436_14786686_14789105_14789243_14803943_14804051_14818182_14818394_14819135_14819210_14830697_14830847_14831639_14831778_14832721_14832834_14834981_14835096_14843826_14844027_14859042_14859247_14861204_14861367_14867505_14867759_14869460
transcript_28239.known	chr11	+	5521	2	FSM	ENSG00000152270.9	ENST00000534317.1	5521	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	37	False	NA	NA	False	ATTAAA	-26	NA	14644259	14776663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_14645054_14771936
transcript_28242.known	chr11	+	1044	5	FSM	ENSG00000175868.14	ENST00000324229.11	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1.92028643696715	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	-1	True	NA	10	True	AATAAA	-20	NA	15073592	15078637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15078082
transcript_28252.known	chr11	+	3920	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	0	0	0	0	multi-exon	FALSE	canonical	3	2521	junction_3	127.779839959205	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTGCCCATTACC	-3	True	NA	20	True	AGTAAA	-17	NA	16738646	16758340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
transcript_28255.known	chr11	+	575	4	FSM	ENSG00000110696.10	ENST00000525684.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1290.31710142206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAATGATGTTTGTTA	8	True	NA	-65	True	AAAAAG	-14	NA	16738657	16755067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_16738842_16744600_16744685_16752784_16752895_16754870
transcript_28256.known	chr11	+	762	3	FSM	ENSG00000110696.10	ENST00000525256.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2526	junction_2	150	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTAGCCTGGTGTGGTG	9	True	NA	NA	False	ACTAAA	-16	NA	16738658	16748591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_16738842_16744600_16744685_16748096
transcript_28259.known	chr11	-	5530	27	FSM	ENSG00000166689.16	ENST00000531066.6	5530	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	20.447074124106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	1	True	NA	-26	True	ATTAAA	-13	NA	17014414	16777296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791200_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
transcript_28273.known	chr11	-	4980	23	FSM	ENSG00000166689.16	ENST00000355661.7	4980	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.0274377788958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGTTGCCTAATCCT	3	True	NA	0	True	ATTAAA	-20	NA	17014412	16787483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_16789297_16789774_16789879_16790797_16790916_16791010_16791200_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
transcript_28282.known	chr11	-	321	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1073	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	27	False	NA	-67	True	NA	NA	NA	16975013	16974692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_16974700_16975000
transcript_28285.known	chr11	+	1290	2	FSM	ENSG00000184669.10	ENST00000530490.3	1332	2	0	42	0	-25	multi-exon	FALSE	canonical	3	46	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTGCGGCGCCTGCA	15	False	NA	NA	False	ATTAAA	-1	NA	17013997	17052951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_17014368_17052031
transcript_28287.known	chr11	-	491	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	5976.52081398534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	3	True	NA	-15	True	AATAAA	-19	NA	17077666	17074388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
transcript_28288.known	chr11	-	561	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	6260.93088925281	2165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17077706	17074388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
transcript_28294.known	chr11	-	568	3	FSM	ENSG00000110700.7	ENST00000534329.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	3	13351	junction_2	1606.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGCGTGTGACTTCG	NA	False	NA	NA	False	NA	NA	NA	17077715	17076824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17077247_17077428_17077478_17077618
transcript_28295.known	chr11	-	664	5	FSM	ENSG00000110700.7	ENST00000525828.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	11387	junction_1	2145.8143413399	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTTTCATATTTA	1	True	NA	-19	True	AATAAA	-15	NA	17077668	17074392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
transcript_28299.nic	chr11	+	1731	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	3	46	junction_3	124.534807854459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTTGAAATAAAGGGAGA	285	False	NA	NA	False	AATAAA	-13	NA	17276702	17331522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_17276829_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_28300.known	chr11	+	2300	14	FSM	ENSG00000070081.18	ENST00000529010.6	2300	14	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	38.5838056595199	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGGGGAAGGCAAGAAA	10	True	NA	NA	False	NA	NA	NA	17276738	17332211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_28313.nic	chr11	+	867	7	ISM	ENSG00000070081.18	ENST00000323688.10	1905	13	-38	20463	-28	0	5prime_fragment	FALSE	canonical	3	349	junction_2	31.8154399973067	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAAGAAAAGAGAAAAGAA	285	False	NA	66	True	TTTAAA	-9	NA	17276702	17310927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824
transcript_28321.known	chr11	-	2146	2	FSM	ENSG00000187486.7	ENST00000528731.1	2146	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAACTCTGGGCTTTTCT	12	True	NA	-6	True	AATAAA	-16	NA	17389331	17385858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17387847_17389173
transcript_28323.known	chr11	-	4979	39	FSM	ENSG00000006071.16	ENST00000684711.1	4979	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	1.92177347686945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTCCTACTAGAGGC	-3	True	NA	-13	True	AATAAA	-8	NA	17476845	17392896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17393129_17393696_17393760_17394265_17394400_17395171_17395276_17395609_17395719_17395851_17395931_17396915_17397047_17397192_17397314_17397683_17397798_17398338_17398442_17402660_17402754_17404511_17404670_17405493_17405564_17406621_17406789_17406887_17407130_17407353_17407454_17408391_17408518_17410515_17410654_17412665_17412747_17413393_17413479_17414511_17414611_17415303_17415340_17416929_17416963_17427048_17427155_17427866_17427943_17428288_17428406_17428564_17428671_17430813_17431033_17432203_17432245_17442719_17442883_17443177_17443313_17448515_17448672_17453118_17453284_17460487_17460677_17461585_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
transcript_28324.known	chr11	-	4903	39	FSM	ENSG00000006071.16	ENST00000643260.1	4903	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	1.92177347686945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGATTATTTCCTACT	-3	True	NA	-19	True	AATAAA	-2	NA	17476845	17392902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17393129_17393696_17393760_17394265_17394400_17395171_17395276_17395609_17395719_17395851_17395931_17396915_17397047_17397192_17397314_17397683_17397798_17398338_17398442_17402660_17402754_17404511_17404670_17405493_17405564_17406621_17406789_17406887_17407130_17407353_17407454_17408391_17408518_17410515_17410654_17412665_17412747_17413393_17413479_17414511_17414611_17415303_17415340_17416929_17416966_17427048_17427155_17427866_17427943_17428288_17428406_17428564_17428671_17430813_17430960_17432203_17432245_17442719_17442883_17443177_17443313_17448515_17448672_17453118_17453284_17460487_17460677_17461585_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
transcript_28326.known	chr11	-	1813	8	FSM	ENSG00000006071.16	ENST00000682863.1	1813	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.05038572777247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTACATGGAATGCCCACA	-3	True	NA	NA	False	AAAAAG	-18	NA	17476845	17448100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17448672_17453118_17453284_17460487_17460677_17461585_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
transcript_28332.known	chr11	+	1803	3	FSM	ENSG00000129152.4	ENST00000250003.4	1803	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCCGGCTTTCCCTGG	0	True	NA	NA	False	AATAAA	-20	NA	17719570	17722136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_17720413_17720901_17720981_17721254
transcript_28339.nic	chr11	-	1529	12	NIC	ENSG00000129158.11	novel	1525	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_10	48.0624593627917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-35	True	NA	-8	True	AATAAA	-20	NA	18012956	17788047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
transcript_28344.nic	chr11	-	1448	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_10	35.4639253326532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-23	True	NA	-8	True	AATAAA	-20	NA	18012944	17788047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_28345.known	chr11	-	1451	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	35.4639253326532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-19	True	NA	-8	True	AATAAA	-20	NA	18013047	17788047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_28346.known	chr11	-	1314	11	FSM	ENSG00000129158.11	ENST00000527494.5	1314	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	63.8357266740185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	23	True	NA	-8	True	AATAAA	-20	NA	18012898	17788047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_17999493_17999573_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_28351.nic	chr11	-	1281	10	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	41.5222683078863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-23	True	NA	-8	True	AATAAA	-20	NA	18012944	17788047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_28352.known	chr11	-	1264	10	FSM	ENSG00000129158.11	ENST00000528200.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	41.5222683078863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCCCAGAGAATTGTT	0	True	NA	-9	True	AATAAA	-19	NA	18013028	17788048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_28356.known	chr11	-	1526	12	FSM	ENSG00000166788.10	ENST00000531581.5	1526	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	161.166768512393	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAAATTGACTTATTG	-19	True	NA	-9	True	AATAAA	-19	NA	18106087	18080344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086861_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_28362.known	chr11	+	518	4	FSM	ENSG00000173432.13	ENST00000356524.9	518	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGAAACTGGGTGTTA	1	True	NA	NA	False	AATAAA	-17	NA	18266263	18269967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18266297_18266883_18266979_18269194_18269334_18269716
transcript_28363.known	chr11	-	4840	23	FSM	ENSG00000110756.18	ENST00000349215.8	4840	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	18.9808515950346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAACTCTTTTTTGCA	8	True	NA	-6	True	AGTAAA	-18	NA	18322140	18278675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18321945
transcript_28367.known	chr11	-	4725	22	FSM	ENSG00000110756.18	ENST00000396253.7	4725	22	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_21	15.6001627993133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTTGCATTTATAAC	278	False	NA	2	True	AGTAAA	-26	NA	18322174	18278667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
transcript_28371.known	chr11	-	4147	22	FSM	ENSG00000110756.18	ENST00000438420.6	4147	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	19.5792476560135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAATATTTTTCCCT	278	False	NA	-22	True	AATAAA	-25	NA	18322174	18279058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18322132
transcript_28377.known	chr11	+	3012	15	FSM	ENSG00000110768.12	ENST00000265963.9	3012	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_14	22.1899269296421	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGGTTTCTCATT	-4	True	NA	34	True	AGTAAA	-30	NA	18322566	18367045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_28383.nic	chr11	+	1210	7	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	10	18979	0	-167	5prime_fragment	FALSE	canonical	3	112	junction_5	19.8578280114753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCCTGTGTGAGTTG	-4	True	NA	NA	False	ATTAAA	-16	NA	18322566	18341791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527
transcript_28384.known	chr11	+	2241	8	FSM	ENSG00000134333.14	ENST00000422447.8	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	3357	junction_1	385.985724595919	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGCCTGAAAACCATAC	-1	True	NA	NA	False	AATACA	-14	NA	18394562	18408425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_28385.known	chr11	+	1922	8	FSM	ENSG00000134333.14	ENST00000379412.9	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1449.11992996735	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGGTTAATTCATTA	1683	False	NA	29	True	AATAAA	-14	NA	18396277	18407847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_28386.known	chr11	+	2035	8	FSM	ENSG00000166796.12	ENST00000541669.6	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	5.34522483824849	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATTTGGTGTCTCAA	-14	True	NA	NA	False	TATAAA	-7	NA	18412317	18452063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_28390.nic	chr11	-	1596	11	NIC	ENSG00000074319.13	novel	1534	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	275.091257585551	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	713	False	NA	-15	True	AATAAA	-14	NA	18526962	18480310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18525660_18525703_18526774
transcript_28391.known	chr11	-	1534	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	32.6330136556052	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-26	True	NA	-15	True	AATAAA	-14	NA	18526942	18480310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
transcript_28395.known	chr11	-	4207	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	8.86258735051196	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGATGCTTCATTTAT	0	True	NA	-2	True	AATAAA	-16	NA	18588734	18529608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_28397.known	chr11	-	5601	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	8.11418511004032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTGGTTTGCATT	1	True	NA	-7	True	ATTAAA	-14	NA	18634342	18606402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
transcript_28400.nnic	chr11	+	375	3	NIC	ENSG00000247595.5	novel	493	4	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	-18	True	NA	26	True	CATAAA	-15	NA	18588770	18603883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_18588996_18603157_18603196_18603771
transcript_28401.known	chr11	-	2167	4	FSM	ENSG00000179119.15	ENST00000536336.5	2167	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	6.68331255192114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCACTAAATATTTTAT	-12	True	NA	NA	False	AATAAA	-9	NA	18634389	18612164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18612489_18614562_18616099_18616874_18616990_18634197
transcript_28414.known	chr11	-	3871	15	FSM	ENSG00000110786.18	ENST00000396170.5	3871	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	36.6068466886974	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCCTGGGTCTGTGTGA	NA	False	NA	-3	True	AATAAA	-22	NA	18792721	18727929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743334_18744005_18744200_18765806_18765884_18771938_18772027_18791524
transcript_28415.nic	chr11	-	3032	15	NIC	ENSG00000110786.18	novel	3091	15	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	32.0433380003407	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	745	False	NA	-5	True	AATAAA	-20	NA	18791839	18727931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743334_18744005_18744200_18765806_18765884_18771938_18772072_18791524
transcript_28416.nic	chr11	-	3145	15	NIC	ENSG00000110786.18	novel	3871	15	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_14	26.0544954795497	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	683	False	NA	-5	True	AATAAA	-20	NA	18791901	18727931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772027_18791524
transcript_28417.known	chr11	-	3091	15	FSM	ENSG00000110786.18	ENST00000358540.7	3091	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_14	17.9636821824207	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	-13	True	NA	-1	True	AATAAA	-24	NA	18791798	18727927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772072_18791524
transcript_28424.nic	chr11	-	2899	14	NIC	ENSG00000110786.18	novel	2796	14	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	38.2690568221791	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	745	False	NA	-5	True	AATAAA	-20	NA	18791839	18727931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743334_18744005_18744200_18765806_18765884_18791524
transcript_28425.known	chr11	-	2796	14	FSM	ENSG00000110786.18	ENST00000396168.1	2796	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	27.4674632695038	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	944	False	18791669	-5	True	AATAAA	-20	NA	18791640	18727931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18791524
transcript_28449.known	chr11	+	3607	3	FSM	ENSG00000151117.9	ENST00000280734.3	3607	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGGTAGCTTACTA	0	True	NA	NA	False	TATAAA	-18	NA	18698778	18704785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18698908_18700932_18701198_18701572
transcript_28454.nic	chr11	-	1603	3	ISM	ENSG00000110786.18	ENST00000358540.7	3091	15	-394	37154	-394	-24314	5prime_fragment	FALSE	canonical	3	68	junction_2	16.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCTGTAACATAGCATA	392	False	NA	NA	False	AATAAA	-27	NA	18792192	18765081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_18765884_18771938_18772072_18791524
transcript_28460.known	chr11	+	2406	17	FSM	ENSG00000177054.14	ENST00000446113.7	2406	17	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	61.416832739486	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	13	True	NA	13	True	AATAAA	-16	NA	19117167	19176415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_28466.known	chr11	+	2283	16	FSM	ENSG00000177054.14	ENST00000399351.7	2283	16	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	75.8335604392204	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	-10	True	NA	13	True	AATAAA	-16	NA	19117144	19176415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_28471.known	chr11	-	3706	13	FSM	ENSG00000129173.13	ENST00000250024.9	3706	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	9.02273363356263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	7	True	NA	NA	False	ATTAAA	-17	NA	19240945	19224062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19240547
transcript_28472.known	chr11	-	3519	13	FSM	ENSG00000129173.13	ENST00000620009.4	3519	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	13.6798716693136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAGCATTTTCATTTC	1	True	NA	NA	False	ATTAAA	-14	NA	19241620	19224065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241406
transcript_28473.known	chr11	-	3432	13	FSM	ENSG00000129173.13	ENST00000527884.5	3432	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	9.90335240657874	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	1	True	NA	NA	False	ATTAAA	-17	NA	19241620	19224062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
transcript_28496.known	chr11	+	607	4	FSM	ENSG00000166833.23	ENST00000526675.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	24.8506650928211	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAAGGCTTTCTCCTA	-5	True	NA	NA	False	AAAACA	-21	NA	20027553	20044995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20027702_20035958_20036098_20043980_20044273_20044967
transcript_28499.known	chr11	+	967	6	FSM	ENSG00000109854.14	ENST00000443524.6	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	132.495131986047	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTATACATATAGATC	-16	True	NA	-56	True	AAGAAA	-30	NA	20363724	20383368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363799_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_28500.known	chr11	+	886	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	120.980990242269	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGATGGTGCTCTGCA	-18	True	NA	-90	True	NA	NA	NA	20363722	20383334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_28501.known	chr11	+	1477	6	FSM	ENSG00000109854.14	ENST00000419348.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	78.3239426995347	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	2	True	NA	18	True	AATAAA	-26	NA	20363742	20383782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363913_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_28503.known	chr11	+	713	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	160	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	NA	False	NA	-1	True	AGTAAA	-36	NA	20363684	20367625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363750_20364236_20364433_20367173
transcript_28504.known	chr11	+	595	3	FSM	ENSG00000109854.14	ENST00000532505.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGATTTTGCCTATT	66	False	NA	NA	False	NA	NA	NA	20363853	20367513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363913_20364236_20364433_20367173
transcript_28505.known	chr11	+	1830	5	FSM	ENSG00000109854.14	ENST00000451739.7	1830	5	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	17.1901134376711	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	-27	True	NA	18	True	AATAAA	-26	NA	20363713	20383782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_28509.known	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	32.2981939639562	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	-1	True	NA	80	True	AATAAA	-19	NA	20387715	20509338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_28511.known	chr11	+	2530	15	FSM	ENSG00000185238.13	ENST00000330796.9	2530	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	86.3912847550762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAAAAGTTTTC	-14	True	NA	36	True	AATAAA	-43	NA	20387557	20509294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20387775_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_28512.known	chr11	+	1736	14	FSM	ENSG00000185238.13	ENST00000437750.2	1736	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	117.956064431188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATTTGGAAGAGAGAT	-1	True	NA	NA	False	NA	NA	NA	20387715	20508708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20387775_20389743_20389827_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_28514.known	chr11	+	6739	21	FSM	ENSG00000171714.13	ENST00000682341.1	6739	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	6.19899185351941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAAACTACATTTTGAC	-27	True	NA	-4	True	AATAAA	-7	NA	22193032	22283344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_22193533_22203803_22203851_22211263_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370_22255523_22257679_22257755_22259518_22259742_22262128_22262299_22262945_22263044_22270311_22270443_22272783_22272990_22274568_22274748_22276093_22276200_22279543
transcript_28515.known	chr11	+	4555	4	FSM	ENSG00000171714.13	ENST00000684365.1	4555	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.9848380355227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTTTAACTCAATAAAAA	19	True	NA	NA	False	NA	NA	NA	22193078	22225102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_22193533_22203803_22203851_22211266_22211315_22221096
transcript_28516.known	chr11	+	3665	12	FSM	ENSG00000091664.9	ENST00000263160.4	3665	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.02851895445316	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGCATTAATCATACAT	3	True	NA	12	True	AATAAA	-28	NA	22338380	22379503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_22338620_22341527_22341781_22343246_22343366_22359412_22359528_22360896_22360985_22362738_22362826_22365546_22365690_22370038_22370189_22374754_22374888_22375981_22376093_22376544_22376673_22377404
transcript_28517.known	chr11	-	4479	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	11.8415464455544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTATGTTTTTGG	0	True	NA	NA	False	AATAAA	-17	NA	22829801	22818926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
transcript_28524.nic	chr11	-	301	3	ISM	ENSG00000198168.9	ENST00000354193.5	4479	4	-67	8318	-67	0	5prime_fragment	FALSE	canonical	3	257	junction_2	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTACATCCGGGCCCCCA	NA	False	NA	NA	False	AATAGA	-9	NA	22829868	22827244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_22827321_22827823_22827875_22829694
transcript_28525.known	chr11	+	732	6	FSM	ENSG00000255418.6	ENST00000661041.1	732	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.71118469422501	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGTTCCTTTGGAATTT	NA	False	NA	NA	False	AATAAA	-5	NA	23154682	23166791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_23154794_23155210_23155404_23163495_23163603_23165189_23165334_23166492_23166614_23166735
transcript_28526.known	chr11	-	6285	15	FSM	ENSG00000148942.15	ENST00000396005.8	6285	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	3.51744921492718	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAATGGGTAGATTTTA	-2	True	NA	NA	False	AATAAA	-25	NA	26722060	26667019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_26671252_26673401_26673530_26678711_26678816_26681054_26681222_26683756_26683844_26686476_26686545_26692488_26692602_26697163_26697253_26698405_26698536_26703530_26703672_26703792_26703948_26709311_26709380_26711306_26711359_26712640_26712707_26721375
transcript_28530.known	chr11	-	745	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTCAGCAATTAAACT	NA	False	NA	NA	False	NA	NA	NA	27220102	27217151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27217481_27219686
transcript_28531.known	chr11	-	1452	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	46.2445672484888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATATTGTTACTAG	7	True	NA	-15	True	AATAAA	-20	NA	27363215	27338511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
transcript_28533.nic	chr11	-	791	4	ISM	ENSG00000109881.17	ENST00000328697.11	1452	6	-39	2914	-20	-2914	5prime_fragment	FALSE	canonical	3	234	junction_1	57.1722543430523	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGAAGAATGTGAGAGGA	3643	False	NA	-2	True	AAAAAG	-38	NA	27363254	27341425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_27341551_27350331_27350440_27357402_27357542_27362835
transcript_28535.known	chr11	-	2109	3	FSM	ENSG00000109881.17	ENST00000317945.6	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	33.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGCAGAACTCTTG	-12	True	NA	NA	False	AATAAA	-19	NA	27363234	27348868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27350440_27357402_27357542_27362835
transcript_28537.nic	chr11	-	558	2	ISM	ENSG00000109881.17	ENST00000317945.6	2109	3	-20	8534	-20	-8534	5prime_fragment	FALSE	canonical	3	374	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAACTAGACAGTGTTCT	3643	False	NA	-5	True	AAAAAG	-36	NA	27363254	27357402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_27357542_27362835
transcript_28539.known	chr11	-	5250	18	FSM	ENSG00000205213.14	ENST00000379214.9	5250	18	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_14	41.8371368614207	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGCCTTAATTTAA	1	True	NA	-18	True	ATTAAA	-16	NA	27472790	27365960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27412788_27412861_27472117
transcript_28548.known	chr11	-	4842	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	66.5187943366384	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTATTTCAAG	2	True	NA	-17	True	CATAAA	-15	NA	27506769	27494417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
transcript_28555.nnic	chr11	-	1934	5	NNC	ENSG00000254934.5	novel	798	4	NA	NA	46	946	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	621.879560284787	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACAGCTTCAGATATCT	1144	False	NA	NA	False	ATTAAA	-18	NA	27634581	27616679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27621289_27621366_27623949_27624146_27634330
transcript_28557.nnic	chr11	-	994	5	NNC	ENSG00000254934.5	novel	786	3	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	621.879560284787	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1138	False	NA	-32	True	AATAAA	-16	NA	27634587	27617625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27621289_27621366_27623949_27624146_27634330
transcript_28559.nnic	chr11	-	1872	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	32	946	at_least_one_novel_splicesite	FALSE	canonical	3	260	junction_2	611.324427416045	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACAGCTTCAGATATCT	1130	False	NA	NA	False	ATTAAA	-18	NA	27634595	27616679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27623949_27624146_27634330
transcript_28562.known	chr11	-	798	4	FSM	ENSG00000254934.5	ENST00000534757.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	751.425903791511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGGATTCAGGAGAAGA	1098	False	NA	NA	False	NA	NA	NA	27634627	27617992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27618179_27620756_27620876_27623949_27624146_27634330
transcript_28564.nnic	chr11	-	912	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	3	260	junction_2	611.324427416045	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1144	False	NA	-32	True	AATAAA	-16	NA	27634581	27617625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27623949_27624146_27634330
transcript_28565.nnic	chr11	-	921	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	692.431946114562	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1144	False	NA	-32	True	AATAAA	-16	NA	27634581	27617625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27621289_27621366_27623949_27624146_27634330
transcript_28569.known	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	541	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1203	False	NA	-32	True	AATAAA	-16	NA	27634522	27617625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27618024_27623949_27624146_27634330
transcript_28570.nnic	chr11	-	1946	3	NIC	ENSG00000254934.5	novel	798	4	NA	NA	46	946	combination_of_known_splicesites	FALSE	canonical	3	260	junction_1	673.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACAGCTTCAGATATCT	1144	False	NA	NA	False	ATTAAA	-18	NA	27634581	27616679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_27618179_27623949_27624146_27634330
transcript_28574.nnic	chr11	-	1021	3	NIC	ENSG00000254934.5	novel	786	3	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	260	junction_1	673.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1123	False	NA	-32	True	AATAAA	-16	NA	27634602	27617625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_27618179_27623949_27624146_27634330
transcript_28575.nic	chr11	-	550	2	ISM	ENSG00000254934.5	ENST00000534757.1	798	4	46	5854	46	-5854	5prime_fragment	FALSE	canonical	3	1607	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGACTGACAACCTG	1144	False	NA	-20	True	GATAAA	-18	NA	27634581	27623846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_27624146_27634330
transcript_28577.known	chr11	-	4000	2	FSM	ENSG00000176697.20	ENST00000533246.5	4000	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-6	True	NA	-90	True	CATAAA	-2	NA	27700488	27654892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27658586_27700181
transcript_28579.known	chr11	-	3417	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	29.6750631844315	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTCTTGTCTCATT	-8	True	NA	-4	True	ATTAAA	-19	NA	28108156	28020618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
transcript_28585.known	chr11	+	4208	7	FSM	ENSG00000169519.21	ENST00000407364.8	4208	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	41.4785754603774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	2	True	NA	15	True	AATAAA	-16	NA	28108387	28333507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
transcript_28587.known	chr11	+	4304	7	FSM	ENSG00000169519.21	ENST00000406787.7	4304	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	48.824231233636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	NA	False	NA	15	True	AATAAA	-16	NA	28108247	28333507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296796_28296932_28330395
transcript_28589.known	chr11	+	795	5	FSM	ENSG00000169519.21	ENST00000403099.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	57.9611939145494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCAATGTTACAGGT	NA	False	NA	NA	False	NA	NA	NA	28108319	28125587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28123861_28123923_28125509
transcript_28591.known	chr11	+	831	5	FSM	ENSG00000169519.21	ENST00000437814.1	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.045815840906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTAATTTTGAATATTT	16	True	NA	NA	False	ATTAAA	-20	NA	28110314	28125866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_28110402_28113317_28113605_28122141_28122181_28123861_28123923_28125509
transcript_28593.known	chr11	+	2373	4	FSM	ENSG00000152219.5	ENST00000282032.4	2373	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	41.6439938313104	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCATTGTTAGCG	-4	True	NA	NA	False	AATAAA	-16	NA	30323103	30338223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_30323203_30330885_30331375_30332865_30332994_30336566
transcript_28597.nic	chr11	+	683	3	ISM	ENSG00000152219.5	ENST00000282032.4	2373	4	-17	5280	-17	0	5prime_fragment	FALSE	canonical	3	253	junction_2	51	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAAAAAGAAGGCT	-21	True	NA	NA	False	NA	NA	NA	30323086	30332943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_30323203_30330885_30331375_30332865
transcript_28598.known	chr11	+	587	2	FSM	ENSG00000152219.5	ENST00000532047.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAATTCTACCATGTAG	25	True	NA	NA	False	NA	NA	NA	30323132	30331402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_30323203_30330885
transcript_28599.known	chr11	-	2562	7	FSM	ENSG00000066382.17	ENST00000358117.10	2562	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTGTTTAGAGGGTT	13	True	NA	-1	True	AATAAA	-18	NA	30586353	30410223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_30411587_30414227_30414342_30417517_30417634_30495295_30495522_30535993_30536176_30580245_30580495_30586041
transcript_28606.known	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	108.333928203495	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-11	True	NA	-39	True	AATAAA	-15	NA	31509622	31432400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_28612.known	chr11	+	2970	5	FSM	ENSG00000170946.15	ENST00000465995.6	2970	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	26.1055549644132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	3	True	NA	NA	False	AATAAA	-15	NA	31369859	31432835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270
transcript_28617.known	chr11	-	985	5	FSM	ENSG00000148950.11	ENST00000532624.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	31.5158690186388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGCTTTATCAGAAA	6	True	NA	NA	False	NA	NA	NA	31509605	31452544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31453093_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_28620.known	chr11	-	469	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	141.563491841019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-1	True	NA	-39	True	AATAAA	-15	NA	31509574	31432400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
transcript_28622.known	chr11	+	2745	3	FSM	ENSG00000170946.15	ENST00000529086.5	2745	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTGAATACCGTTA	-17	True	NA	NA	False	AATAAA	-18	NA	31369839	31417338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_31369913_31370715_31370860_31414810
transcript_28623.known	chr11	-	314	3	FSM	ENSG00000148950.11	ENST00000533642.1	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	63	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTTGACTTGATTA	NA	False	NA	-131	True	NA	NA	NA	31509645	31432492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31432569_31433459_31433571_31509518
transcript_28624.known	chr11	-	1067	3	FSM	ENSG00000148950.11	ENST00000528161.5	1067	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACTCCCATGACACCA	48	False	NA	NA	False	NA	NA	NA	31509563	31452197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31453093_31456259_31456387_31509518
transcript_28626.nic	chr11	+	1615	10	NIC	ENSG00000109911.19	novel	1961	12	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	55.7861879449752	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGATTCCTGACAGTG	NA	False	NA	21	True	AATAAA	-19	NA	31509699	31783775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594906_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
transcript_28627.known	chr11	+	1651	10	FSM	ENSG00000109911.19	ENST00000638347.1	1651	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.8949851442289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAGACACCACTACATA	-10	True	NA	NA	False	AATAAA	-17	NA	31509761	31719957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31719472
transcript_28630.known	chr11	-	6888	14	FSM	ENSG00000007372.25	ENST00000419022.6	6888	14	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_13	3.06729262113491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATGCTACAGTGGG	-6	True	NA	NA	False	AATAAA	-15	NA	31811331	31784791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31790020_31790709_31790861_31793437_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31801870_31801913_31802703_31802835_31806401_31806463_31806848_31806926_31810827_31811016_31811212
transcript_28631.known	chr11	-	2730	13	FSM	ENSG00000007372.25	ENST00000640610.1	2730	13	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_12	2.98491578142872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTGTTACAAATTTTA	-6	True	NA	97	True	NA	NA	NA	31811331	31788907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31790020_31790709_31790861_31793437_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31802703_31802835_31806401_31806463_31806848_31806926_31810827_31811016_31811212
transcript_28634.known	chr11	+	2369	6	FSM	ENSG00000049449.10	ENST00000054950.4	2369	6	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_5	93.4742745358315	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTCTAGGTCATTT	-17	True	NA	8	True	AATAAA	-18	NA	32091073	32105722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32091451_32097143_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
transcript_28637.known	chr11	+	5047	11	FSM	ENSG00000149100.13	ENST00000531120.6	5047	11	0	0	0	0	multi-exon	FALSE	canonical	3	2394	junction_7	205.125839425461	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCATAAAATTCATTTA	-4	True	NA	9	True	AATAAA	-20	NA	32583830	32606264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_28655.known	chr11	+	1207	8	FSM	ENSG00000149100.13	ENST00000524896.5	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	884.465732887974	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTCCAACGTCTC	-1	True	NA	NA	False	NA	NA	NA	32583833	32602823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32583930_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_2866.known	chr1	+	487	2	FSM	ENSG00000230337.2	ENST00000447600.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCCACCCATTAAGTC	137	False	NA	-42	True	AATACA	-2	NA	11099674	11102051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11099911_11101800
transcript_28664.known	chr11	+	5543	6	FSM	ENSG00000135378.4	ENST00000257836.4	5543	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.8	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTATTGCTTGTTTCAT	5	True	NA	7	True	AATAAA	-16	NA	32829926	32858120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32830174_32830507_32830633_32836657_32836822_32838881_32838931_32840106_32840240_32853295
transcript_28667.known	chr11	+	1741	9	FSM	ENSG00000121690.11	ENST00000241051.8	1741	9	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_5	4.29934588047996	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTGTGTCAGAAGCTAT	-20	True	NA	14	True	AATAAA	-16	NA	33015877	33033582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_33016029_33025658_33026050_33027685_33027814_33028602_33028793_33031377_33031590_33032335_33032479_33032667_33032794_33032888_33032968_33033261
transcript_28668.known	chr11	-	2812	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_10	119.590081110433	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	0	True	NA	-26	True	AATAAA	-15	NA	33161480	33084583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
transcript_28670.known	chr11	+	2649	10	FSM	ENSG00000176148.16	ENST00000334274.9	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	9.32274531706801	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAATTAGATTTAACT	-24	True	NA	10	True	ATTAAA	-1	NA	33039571	33073550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_33039793_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_28680.known	chr11	+	2633	10	FSM	ENSG00000176148.16	ENST00000432887.5	2633	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.127372185934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGTTTTCAGATAAA	-4	True	NA	23	True	ATTAAA	-14	NA	33040014	33073563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_33040207_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_2869.known	chr1	-	8721	58	FSM	ENSG00000198793.13	ENST00000361445.9	8721	58	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_57	51.1329506246355	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGAGTGGCGTTTTA	-1	True	NA	-3	True	AATAAA	-23	NA	11262551	11106534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11107501_11108180_11108287_11109289_11109371_11109648_11109730_11112851_11112918_11114317_11114454_11114812_11114888_11115395_11115469_11117003_11117087_11121245_11121369_11121978_11122127_11124497_11124634_11126621_11126797_11127009_11127145_11127623_11127807_11128003_11128127_11128453_11128553_11128854_11128952_11129737_11129839_11130528_11130778_11133079_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647_11144756_11144967_11145046_11146675_11146792_11150125_11150227_11157151_11157292_11167441_11167518_11199257_11199404_11199540_11199704_11204560_11204704_11209311_11209459_11210813_11210907_11212311_11212475_11212795_11212909_11213398_11213567_11216147_11216235_11228667_11228919_11230924_11231055_11231299_11231435_11232435_11232529_11233397_11233488_11234142_11234266_11237842_11238049_11238401_11238618_11240302_11240548_11241552_11241682_11243113_11243301_11247624_11247734_11247818_11248095_11253838_11253974_11255991_11256193_11256932_11257166_11258484_11258594_11259247_11259424_11262444
transcript_28695.known	chr11	-	1132	3	FSM	ENSG00000176102.13	ENST00000438862.6	1132	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	23	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAGACTGGAATTA	NA	False	NA	NA	False	TTTAAA	-45	NA	33161531	33140965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33141763_33141884_33141987_33161298
transcript_28696.known	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-11	True	NA	16	True	NA	NA	NA	33161491	33141464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33141987_33161298
transcript_28697.known	chr11	+	1898	10	FSM	ENSG00000176148.16	ENST00000531632.6	1898	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.6923377003705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATTTTGAGAGATTG	12	True	NA	11	True	NA	NA	NA	33040030	33072848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_33040203_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_28699.known	chr11	-	678	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	210.182063935056	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAAGATAGAGGGGC	NA	False	NA	-26	True	AATAAA	-15	NA	33736479	33709995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
transcript_28703.known	chr11	-	7563	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	82.2692057954993	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-3	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
transcript_28707.known	chr11	-	2403	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_1	41.4077287471796	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTGTATAATTG	-8	True	NA	-3	True	TTTAAA	-19	NA	33774520	33740943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_28709.known	chr11	-	1672	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	31.1555238547945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	NA	False	NA	NA	False	AATAAA	-33	NA	33774543	33746742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_28711.known	chr11	-	1687	3	FSM	ENSG00000135363.12	ENST00000395833.7	1687	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTTGTTTATTTGAT	36	True	NA	NA	False	AATAAA	-16	NA	33869816	33858575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33859576_33864601_33864818_33869345
transcript_28713.known	chr11	+	5514	19	FSM	ENSG00000135387.21	ENST00000341394.9	5514	19	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_1	215.543040873826	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTCTCACTGTCCTTG	-1	True	NA	18	True	ATTAAA	-14	NA	34051730	34102610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34051872_34052420_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
transcript_28718.known	chr11	+	3498	18	FSM	ENSG00000135387.21	ENST00000389645.7	3498	18	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_1	216.962660031054	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	0	True	NA	5	True	AATAAA	-14	NA	34051731	34099054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34051872_34052420_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697
transcript_28722.known	chr11	+	3438	18	FSM	ENSG00000135387.21	ENST00000532820.5	3438	18	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_17	98.4053828668058	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGATGGTATAAGCAAAA	478	False	NA	-38	True	NA	NA	NA	34052209	34100464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
transcript_28727.known	chr11	+	3454	17	FSM	ENSG00000135387.21	ENST00000530820.5	3454	17	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_2	82.0750418824139	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGAGTACTGGTGGA	-8	True	NA	9	True	AATAAA	-18	NA	34052328	34099058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697
transcript_28739.known	chr11	+	587	2	FSM	ENSG00000135387.21	ENST00000526477.5	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTCTTTATTACTCTT	0	True	NA	NA	False	NA	NA	NA	34051731	34052867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34051872_34052420
transcript_28741.known	chr11	+	3973	29	FSM	ENSG00000135372.10	ENST00000257829.8	3973	29	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_13	23.8779849079713	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	10	True	NA	21	True	AATAAA	-17	NA	34105628	34146908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34105793_34108210_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_28747.known	chr11	+	3436	27	FSM	ENSG00000135372.10	ENST00000531159.6	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	57.4444934043744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCCAGGAGGCTGCT	-2	True	NA	NA	False	NA	NA	NA	34105616	34146574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34105793_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_28755.known	chr11	-	4905	17	FSM	ENSG00000166016.6	ENST00000435224.3	4905	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	3.65504787930336	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCACTGCTCCTG	-3	True	NA	0	True	AATAAA	-17	NA	34358010	34150986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_34152585_34154264_34154379_34154700_34154770_34159295_34159387_34159905_34160009_34160247_34160354_34160902_34161082_34162575_34162806_34164685_34164822_34165259_34165357_34167258_34167361_34167902_34167993_34170905_34171072_34173154_34173308_34197324_34197539_34204543_34204691_34356700
transcript_28757.known	chr11	+	2291	13	FSM	ENSG00000121691.7	ENST00000241052.5	2291	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	21.2581683647068	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTATTTTCTTTCTT	-24	True	NA	10	True	AATAAA	-20	NA	34438933	34472060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
transcript_28762.known	chr11	+	2500	11	FSM	ENSG00000110435.13	ENST00000227868.9	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_10	42.4758755059857	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	-17	True	NA	10	True	AATAAA	-19	NA	34916617	34996128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_28764.known	chr11	+	952	6	FSM	ENSG00000110435.13	ENST00000430469.6	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	183.822305501808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTATTTATTTAA	-3	True	NA	NA	False	AAGAAA	-45	NA	34916631	34995275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34984569_34984729_34992314_34992380_34994913
transcript_28768.known	chr11	-	1246	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	68.5599899520283	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCCTCAATGTTAATG	-25	True	NA	-10	True	AATAAA	-21	NA	34916379	34882294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_28770.known	chr11	-	1042	6	FSM	ENSG00000149089.13	ENST00000527830.1	1042	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	104.396168512068	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	3	True	NA	-12	True	AATAAA	-15	NA	34916351	34882369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34916227
transcript_28772.nic	chr11	-	530	5	ISM	ENSG00000149089.13	ENST00000395787.4	1246	7	-21	6045	-21	-5970	5prime_fragment	FALSE	canonical	3	171	junction_4	65.2476053200422	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGATGATAAAAGGAATAAA	97	False	NA	NA	False	TTTAAA	-13	NA	34916400	34888339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_28778.known	chr11	+	2292	12	FSM	ENSG00000026508.21	ENST00000433892.6	2292	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	5.46514122370514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	17	False	NA	13	True	AATAAA	-24	NA	35139187	35230027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_28779.known	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	7.806247497998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	0	True	NA	NA	False	ATTAAA	-32	NA	35139170	35232402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_28781.known	chr11	-	2798	10	FSM	ENSG00000110436.13	ENST00000643305.1	2798	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.34256066373273	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	35419553	35264968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_35265759_35280866_35281002_35286756_35286952_35292286_35292521_35301518_35301646_35306073_35306243_35312197_35312449_35315022_35315176_35317376_35317517_35418949
transcript_28782.known	chr11	-	2785	12	FSM	ENSG00000149090.13	ENST00000622144.4	2785	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	38.8244619148187	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATGCTCTTATTTCT	1	True	NA	NA	False	AATAAA	-32	NA	35525623	35431822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35451887_35451939_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_28784.known	chr11	-	2723	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	15.2921548514263	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTGCTATGCTCTTAT	8	True	NA	NA	False	AATAAA	-28	NA	35525616	35431826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_28787.known	chr11	-	2801	9	FSM	ENSG00000149090.13	ENST00000615849.4	2801	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	36.3625408215653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTGCTATGCTC	1	True	NA	NA	False	AATAAA	-24	NA	35526031	35431830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35492044_35492174_35494095_35494273_35525512
transcript_28790.known	chr11	+	2406	1	FSM	ENSG00000179431.7	ENST00000317811.6	2406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTAATTCCTGTGGTTT	2	True	NA	5	True	AATAAA	-18	NA	35618459	35620865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35618500_35620900
transcript_28794.known	chr11	+	12994	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	23.7315717979235	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCAGGTGTTTCTT	2	True	NA	NA	False	ATTAAA	-16	NA	35662774	35818007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
transcript_28806.known	chr11	+	3814	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	15.8619040471187	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	-7	True	NA	22	True	AATAAA	-18	NA	35944061	36232136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_28811.known	chr11	+	1879	5	FSM	ENSG00000179241.13	ENST00000528989.5	1879	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	61.4186453774422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTTGAGTTGGCCCA	6603	False	NA	NA	False	NA	NA	NA	35943980	36230267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35944145_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_28817.known	chr11	-	2949	6	FSM	ENSG00000110442.12	ENST00000263401.10	2949	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	26.55861442169	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTGATCATTTAAGGCA	-3	True	NA	NA	False	AATAAA	-17	NA	36289424	36272291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_28819.known	chr11	-	881	5	FSM	ENSG00000110442.12	ENST00000532705.1	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	167.249813153857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAGCTGTTTGAGAAAT	-3	True	NA	NA	False	NA	NA	NA	36289424	36274324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_36274773_36276136_36276241_36278476_36278617_36280711_36280838_36289361
transcript_28820.nnic	chr11	-	1191	5	NIC	ENSG00000110442.12	novel	2949	6	NA	NA	7	-4	intron_retention	FALSE	canonical	3	8	junction_1	162.153283963045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATGATTTTTGTAGCT	NA	False	NA	-8	True	ACTAAA	-15	NA	36289442	36273963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_36274773_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_28831.known	chr11	-	7885	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_3	15.2032525759749	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATAGTCCAAGTGGTTT	-6	True	NA	-11	True	ATTAAA	-21	NA	36510272	36483768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
transcript_28838.known	chr11	+	866	6	FSM	ENSG00000166352.18	ENST00000334307.10	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	64.2507587503836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-18	True	NA	17	True	AATAAA	-18	NA	36594501	36659272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_28839.known	chr11	+	930	6	FSM	ENSG00000166352.18	ENST00000531554.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	61.3070958372683	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	-18	True	NA	32	True	AATAAA	-33	NA	36594501	36659287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_28840.known	chr11	+	1062	6	FSM	ENSG00000166352.18	ENST00000446510.6	1062	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	103.52854678783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTGCACTCATTTAT	51	False	NA	35	True	AATAAA	-36	NA	36594492	36659290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594762_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_28841.known	chr11	+	1207	6	FSM	ENSG00000166352.18	ENST00000617650.5	1207	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.767527576724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGCACTCATTTA	-19	True	NA	34	True	AATAAA	-35	NA	36594500	36659289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_28842.known	chr11	+	3485	5	FSM	ENSG00000166352.18	ENST00000677116.1	3485	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	122.217787167008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATCCACCAATTTCT	-18	True	NA	NA	False	ATTAAA	-16	NA	36594501	36661909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_28843.known	chr11	+	633	4	FSM	ENSG00000166352.18	ENST00000347206.8	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	110.236110236165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-7	True	NA	17	True	AATAAA	-18	NA	36594512	36659272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594593_36610080_36610240_36648015_36648156_36659018
transcript_28844.known	chr11	+	646	4	FSM	ENSG00000166352.18	ENST00000527108.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	108.70142593361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCCTTTGTGGAAATT	26	False	NA	14	True	AATAAA	-15	NA	36594545	36659269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594642_36610080_36610240_36648015_36648156_36659018
transcript_28845.known	chr11	+	801	4	FSM	ENSG00000166352.18	ENST00000534635.5	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	139.490342158716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGTGGAAATTTACAT	-4	True	NA	19	True	AATAAA	-20	NA	36594515	36659274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594762_36610080_36610240_36648015_36648156_36659018
transcript_28851.nic	chr11	+	3710	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	404	junction_19	125.998835697883	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACCAATCATTGTCAG	NA	False	NA	NA	False	AAAAAG	-9	NA	43358898	43493961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_28852.nic	chr11	+	4680	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	404	junction_19	125.998835697883	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	NA	False	NA	17	True	AATAAA	-18	NA	43358898	43494931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_28855.known	chr11	+	4488	24	FSM	ENSG00000052841.15	ENST00000039989.9	4488	24	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	182.241587513064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	-29	True	NA	17	True	AATAAA	-18	NA	43358919	43494931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_28859.known	chr11	+	3648	20	FSM	ENSG00000052841.15	ENST00000299240.10	3648	20	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_19	163.072235578655	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCTCCTTCCTGCC	-17	True	NA	NA	False	TATAAA	-16	NA	43358931	43446719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930
transcript_28866.nic	chr11	+	1452	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-33	45097	-21	0	5prime_fragment	FALSE	canonical	3	720	junction_9	57.4716247753706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	NA	False	NA	16	True	TATAAA	-32	NA	43358898	43401622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_28867.nic	chr11	+	1837	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-33	44712	-21	385	5prime_fragment	FALSE	canonical	3	720	junction_9	57.4716247753706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	43358898	43402007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_28869.nic	chr11	+	984	6	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-33	49746	-21	-1085	5prime_fragment	FALSE	canonical	3	784	junction_2	41.4632367284562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGATCTCAAAAAGTTC	NA	False	NA	NA	False	AAGAAA	-30	NA	43358898	43396973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708
transcript_28872.known	chr11	+	2257	15	FSM	ENSG00000166181.13	ENST00000455725.6	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	526.886929743654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCATTCCTACCTAG	-33	True	NA	NA	False	AATAAA	-14	NA	43311977	43342980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318420_43318483_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_28880.known	chr11	+	3726	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_13	292.10679331064	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-15	True	NA	18	True	AATAAA	-18	NA	43311995	43344529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_28881.known	chr11	+	3714	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_13	266.767212307154	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-8	True	NA	18	True	AATAAA	-18	NA	43312002	43344529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
transcript_28885.known	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_9	160.173408633685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	85	False	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
transcript_28895.known	chr11	+	2396	11	FSM	ENSG00000149084.13	ENST00000278353.10	2396	11	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_3	53.0241454433732	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	20	True	NA	24	True	AATAAA	-43	NA	43680737	43856615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_28903.known	chr11	+	1544	10	FSM	ENSG00000166199.13	ENST00000302708.9	1544	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	13.3813948598441	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	-14	True	NA	22	True	ATTAAA	-24	NA	43880830	43920274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_28914.known	chr11	+	2383	15	FSM	ENSG00000110455.14	ENST00000263776.9	2383	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4.59202947441298	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAGGAGAATGGAATGA	4	True	NA	NA	False	AATAAA	-21	NA	44066269	44084237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44066702_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
transcript_28928.known	chr11	+	2997	15	FSM	ENSG00000151348.16	ENST00000358681.8	2997	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	86.0875207244917	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	-5	True	NA	42	True	ATTAAA	-20	NA	44095716	44244931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44144246_44144340_44171673_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_2893.known	chr1	+	3654	2	FSM	ENSG00000120942.14	ENST00000376810.6	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGGTCTGGCTTCTGGT	-13	True	NA	12	True	ATTAAA	-23	NA	11273197	11288434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11274061_11285643
transcript_28931.known	chr11	+	10037	14	FSM	ENSG00000151348.16	ENST00000533608.7	10037	14	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_9	29.8942910779509	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTATTATATGTGGAT	-2	True	NA	NA	False	AATAAA	-19	NA	44095677	44251962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_28939.known	chr11	+	2212	10	FSM	ENSG00000085117.12	ENST00000227155.9	2212	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.09901951359278	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	-12	True	NA	7	True	ATTAAA	-15	NA	44565662	44620358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_28941.nic	chr11	+	1601	9	NIC	ENSG00000085117.12	novel	2212	10	NA	NA	20	80	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.99913190257816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGAGGGAAGGGCGTTA	2	True	NA	NA	False	NA	NA	NA	44565620	44619789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44619048
transcript_28961.known	chr11	-	658	8	FSM	ENSG00000175274.19	ENST00000528473.5	658	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	163.132724228726	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGATCCTGCTGCTCCT	2	True	NA	NA	False	NA	NA	NA	44950752	44934979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939113_44939191_44950676
transcript_28965.nic	chr11	-	3494	8	NIC	ENSG00000175274.19	novel	3683	8	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	146.2780410934	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	11	False	NA	-2	True	AAGAAA	-30	NA	44950917	44932347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950676
transcript_28966.known	chr11	-	3683	8	FSM	ENSG00000175274.19	ENST00000308212.9	3683	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	150.828054554901	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-2	True	AAGAAA	-30	NA	44951306	44932347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950876
transcript_28968.known	chr11	-	3381	8	FSM	ENSG00000175274.19	ENST00000395648.7	3381	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	166.458427732768	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	7	True	NA	-2	True	AAGAAA	-30	NA	44950845	44932347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44941002_44941078_44950676
transcript_28973.known	chr11	-	3344	7	FSM	ENSG00000175274.19	ENST00000525680.6	3344	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	69.2950615524336	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	1	True	NA	-2	True	AAGAAA	-30	NA	44950883	44932347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950676
transcript_28982.known	chr11	-	2045	6	FSM	ENSG00000175274.19	ENST00000532253.5	2045	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_4	133.535912772557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCGATGCACACACCGG	1	True	NA	NA	False	NA	NA	NA	44950778	44933482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44938206_44938367_44950676
transcript_28989.nnic	chr11	+	3709	7	NNC	ENSG00000019485.14	novel	652	4	NA	NA	-2231	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	7.7817450199525	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATCAATCTCACT	NA	False	NA	-16	True	NA	NA	NA	45180685	45214713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_45181168_45181760_45181886_45182245_45182350_45182860_45183124_45204710_45204779_45208873_45209296_45212468
transcript_28992.known	chr11	-	5165	6	FSM	ENSG00000019505.8	ENST00000020926.8	5165	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	8.97997772825746	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTGCCTGGTGTTTTCT	-35	True	NA	-2	True	AATAAA	-16	NA	45286341	45240301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45244357_45246382_45246513_45252420_45252723_45254269_45254405_45255665_45255892_45286024
transcript_28994.known	chr11	-	3906	4	FSM	ENSG00000175264.8	ENST00000308064.7	3906	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTCTGTAATTTTGCT	-1	True	NA	NA	False	ATTAAA	-24	NA	45665622	45647688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45650966_45651992_45652091_45652520_45652607_45665177
transcript_28998.known	chr11	+	1756	3	FSM	ENSG00000181830.9	ENST00000442528.2	1756	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTCTCTATCCTCTC	-8	True	NA	2	True	NA	NA	NA	45804071	45811558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45804518_45805809_45806337_45810775
transcript_29.known	ERCC-00078	+	977	1	FSM	ERCC-00078A	DQ883673	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00078_+_0_1000
transcript_2900.known	chr1	+	5265	21	FSM	ENSG00000204624.8	ENST00000294484.7	5265	21	0	0	0	0	multi-exon	TRUE	canonical	1	17	junction_18	7.47729897757205	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCTGCTGTTAATACGA	0	True	NA	27	True	ATTAAA	-17	NA	11479154	11537551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11479373_11500989_11502089_11502677_11502898_11514389_11514527_11515368_11515504_11516000_11516162_11517462_11517603_11519354_11519504_11519718_11519881_11520686_11520849_11523941_11524056_11525175_11525313_11526650_11526836_11529555_11529687_11529786_11529960_11530906_11531034_11531564_11531711_11534380_11534541_11535010_11535125_11535477_11535645_11536323
transcript_29005.known	chr11	+	3429	2	FSM	ENSG00000181830.9	ENST00000314134.4	3429	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	-1	True	NA	13	True	AATAAA	-13	NA	45805148	45813016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45806337_45810775
transcript_29007.nnic	chr11	+	4112	13	NNC	ENSG00000121671.12	novel	4203	12	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	20.2113829314077	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAAGTTTGTGCTGTCG	291	False	NA	18	True	TATAAA	-15	NA	45847408	45883241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_45847706_45855981_45856091_45858730_45858874_45860847_45861033_45862059_45862149_45867611_45867753_45869505_45869818_45870052_45870205_45870329_45870533_45870841_45870935_45872091_45872234_45880913_45882064_45882145
transcript_29008.known	chr11	+	4131	12	FSM	ENSG00000121671.12	ENST00000616080.2	4131	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	5.16024216229759	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTGTGCTGTCGTCA	-6	True	NA	21	True	TATAAA	-18	NA	45847474	45883244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45847706_45855981_45856091_45858730_45858874_45860847_45861033_45862059_45862149_45867611_45867753_45869505_45869818_45870052_45870205_45870329_45870533_45870841_45870935_45872091_45872234_45880913
transcript_29019.known	chr11	+	3050	12	FSM	ENSG00000121653.11	ENST00000241014.6	3050	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	30.6499834845519	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	-4	True	NA	20	True	ATTAAA	-20	NA	45885650	45906465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45885922_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
transcript_29022.known	chr11	+	3180	12	FSM	ENSG00000121653.11	ENST00000395629.2	3180	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	59.7212533288908	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	1	True	NA	20	True	ATTAAA	-20	NA	45896549	45906465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45896951_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
transcript_29032.known	chr11	-	1668	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	26.0124969966361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCGGGCACTGGCCAG	2	True	NA	NA	False	AGTAAA	-23	NA	45917877	45909662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_29033.known	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	66.3633181810554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	8	True	NA	-36	True	NA	NA	NA	45918812	45910204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
transcript_29034.known	chr11	-	1479	11	FSM	ENSG00000121680.16	ENST00000241041.7	1479	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.7530694253176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGACATCGGGCACT	8	True	NA	NA	False	AGTAAA	-17	NA	45917829	45909668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45910178_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_29056.known	chr11	+	2459	15	FSM	ENSG00000165905.18	ENST00000529052.5	2459	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	222.466278114143	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	-12	True	NA	38	True	ATTAAA	-14	NA	45921620	45929096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45921694_45922820_45922965_45923057_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_29065.nic	chr11	+	2741	15	NIC	ENSG00000165905.18	novel	2552	14	NA	NA	-282	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	183.696858204722	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	741	False	NA	38	True	ATTAAA	-14	NA	45922373	45929096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_45922729_45922820_45922965_45923057_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_29078.known	chr11	+	2528	14	FSM	ENSG00000165905.18	ENST00000531526.5	2528	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	221.292304483614	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	12	True	NA	38	True	ATTAAA	-14	NA	45921644	45929096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45921694_45922820_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_29109.known	chr11	+	2552	14	FSM	ENSG00000165905.18	ENST00000401752.6	2552	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	176.234747965696	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	-22	True	NA	38	True	ATTAAA	-14	NA	45922655	45929096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45922729_45922820_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_29207.known	chr11	+	2522	13	FSM	ENSG00000165905.18	ENST00000325468.9	2522	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	174.031127483946	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	100	False	NA	38	True	ATTAAA	-14	NA	45922777	45929096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_29217.known	chr11	-	2730	18	FSM	ENSG00000135365.17	ENST00000418153.6	2730	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	24.5655679361924	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAATTGAGATTTCA	-26	True	NA	NA	False	TATAAA	-6	NA	46121010	45933480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969902_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
transcript_29223.known	chr11	+	2673	12	FSM	ENSG00000157613.11	ENST00000621158.5	2673	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15.7122892367042	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	-4	True	NA	NA	False	AAGAAA	-26	NA	46277661	46321409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46278214_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_29226.nnic	chr11	+	2199	12	NNC	ENSG00000157613.11	novel	1817	4	NA	NA	-391	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8492005658121	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	NA	False	NA	NA	False	AAGAAA	-26	NA	46294734	46321409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_46294813_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_29244.known	chr11	+	3816	31	FSM	ENSG00000149091.15	ENST00000343674.10	3816	31	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_1	117.581385526036	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTCTTCTTTTGCG	229	False	NA	31	True	AGTAAA	-19	NA	46332904	46380554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46333488_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
transcript_29247.known	chr11	+	2862	31	FSM	ENSG00000149091.15	ENST00000421244.6	2862	31	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_3	59.4222180669823	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCGCCCACGGGCAGCA	42	False	NA	NA	False	NA	NA	NA	46347587	46379947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
transcript_29256.known	chr11	+	3213	30	FSM	ENSG00000149091.15	ENST00000318201.12	3213	30	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	108.955259229072	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCCGGAAACTCAGCG	42	False	NA	NA	False	NA	NA	NA	46347587	46380367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
transcript_29264.known	chr11	+	3337	31	FSM	ENSG00000149091.15	ENST00000527911.5	3337	31	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_29	108.89587789362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCGGGAAGAGGCTTCC	0	True	NA	NA	False	GGGGCT	-13	NA	46347462	46380282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379453_46379569_46379830
transcript_29267.nic	chr11	+	1704	4	ISM	ENSG00000149091.15	ENST00000421244.6	2862	31	-69	10749	-4	23	5prime_fragment	FALSE	canonical	3	379	junction_3	92.3616081857969	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGAGCAAACCATGGTCC	56	False	NA	NA	False	AAAACA	-16	NA	46347518	46369198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001
transcript_29269.nic	chr11	+	1935	3	ISM	ENSG00000149091.15	ENST00000421244.6	2862	31	-69	10772	-4	0	intron_retention	FALSE	canonical	3	483	junction_1	61	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	56	False	NA	NA	False	NA	NA	NA	46347518	46369175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_46347821_46367290_46367400_46367651
transcript_29270.known	chr11	+	1785	3	FSM	ENSG00000149091.15	ENST00000527674.5	1785	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	290	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	28	True	NA	NA	False	NA	NA	NA	46345433	46369175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46345586_46367290_46367400_46367651
transcript_29273.known	chr11	+	1166	5	FSM	ENSG00000110492.17	ENST00000405308.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4477.66883405863	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTCTTCTTTTTT	5	False	NA	-12	True	AATAAA	-17	NA	46380755	46383799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_29274.known	chr11	+	985	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4569.42345241716	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	-9	True	NA	14	True	AATAAA	-43	NA	46381067	46383825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_29278.known	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	7276	junction_1	1423.58884074722	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	0	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_29282.known	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	4453.43206836031	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	1	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_29284.known	chr11	+	1339	5	FSM	ENSG00000110492.17	ENST00000489525.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	5093.53163335617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTTTTTTAATATAT	2	True	NA	-5	True	AATAAA	-24	NA	46381736	46383806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46383194_46383468
transcript_29287.known	chr11	+	603	4	FSM	ENSG00000110492.17	ENST00000490240.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4818.47391700826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTAAACCTTAAGT	-16	True	NA	74	True	GGGGCT	-33	NA	46381060	46382821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586
transcript_29289.known	chr11	+	686	4	FSM	ENSG00000110492.17	ENST00000395569.8	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	4463.83843295829	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	0	True	NA	14	True	AATAAA	-43	NA	46381668	46383825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381759_46382056_46382134_46382586_46382749_46383468
transcript_29290.known	chr11	+	635	4	NNC	ENSG00000110492.17	novel	686	4	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4488.40917128651	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	-14	True	NA	26	True	AATAAA	-33	NA	46381654	46383837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_46381759_46382056_46382134_46382663_46382749_46383468
transcript_29296.known	chr11	+	1026	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	10420	junction_2	161.831874349757	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	18	False	NA	17	True	AATAAA	-1	NA	46381752	46383783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
transcript_29297.nic	chr11	-	5037	19	NIC	ENSG00000110497.15	novel	5023	19	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_12	18.4113659205863	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	195	False	NA	-6	True	ATTAAA	-18	NA	46594081	46396413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_29300.known	chr11	-	5249	18	FSM	ENSG00000110497.15	ENST00000683756.1	5249	18	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	16.7751257608001	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	9	True	NA	-6	True	ATTAAA	-18	NA	46594023	46396413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_29302.known	chr11	-	4817	18	FSM	ENSG00000110497.15	ENST00000533727.5	4817	18	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_10	18.8765796561658	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	328	False	NA	-6	True	ATTAAA	-18	NA	46593948	46396413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_29303.nnic	chr11	-	4830	18	NNC	ENSG00000110497.15	novel	4817	18	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_17	25.1650606360606	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	211	False	NA	-6	True	ATTAAA	-18	NA	46594065	46396413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593931
transcript_29308.known	chr11	-	5067	17	FSM	ENSG00000110497.15	ENST00000534300.5	5067	17	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	22.8988946239769	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	11	True	NA	-6	True	ATTAAA	-18	NA	46594021	46396413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_29309.nnic	chr11	-	4770	17	NIC	ENSG00000110497.15	novel	4817	18	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	24.2705293257069	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	195	False	NA	-6	True	ATTAAA	-18	NA	46594081	46396413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_29315.known	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	NA	False	NA	-60	True	NA	NA	NA	46429150	46428652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46428700_46429200
transcript_29319.known	chr11	+	4246	19	FSM	ENSG00000175224.17	ENST00000683050.1	4246	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	174.21482587758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	-3	True	NA	18	True	AATAAA	-18	NA	46617552	46674518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46663996_46664096_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_29344.nic	chr11	+	2934	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-233	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_2	126.012247441232	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	0	True	NA	18	True	AATAAA	-20	NA	46617293	46673041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_29345.nic	chr11	+	4411	18	NIC	ENSG00000175224.17	novel	4246	19	NA	NA	-233	0	intron_retention	FALSE	canonical	3	84	junction_2	126.012247441232	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	0	True	NA	18	True	AATAAA	-18	NA	46617293	46674518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_29353.known	chr11	+	4348	17	FSM	ENSG00000175224.17	ENST00000359513.8	4348	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	163.417972064733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCGTTATCAGCTCTT	40	False	NA	NA	False	AGTAAA	-17	NA	46617595	46674818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_29359.known	chr11	+	4014	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	72.7375418886286	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	21	True	NA	20	True	AATAAA	-20	NA	46617576	46674520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_29369.known	chr11	+	2566	17	FSM	ENSG00000175224.17	ENST00000529655.5	2566	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	147.606688110668	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-15	True	NA	18	True	AATAAA	-20	NA	46617540	46673041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46617891_46618324_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_29376.nic	chr11	+	2798	16	NIC	ENSG00000175224.17	novel	2566	17	NA	NA	-269	0	combination_of_known_junctions	TRUE	canonical	3	107	junction_1	95.0444574338182	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-36	True	NA	18	True	AATAAA	-20	NA	46617257	46673041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_29377.nic	chr11	+	4275	16	NIC	ENSG00000175224.17	novel	4246	19	NA	NA	-269	0	intron_retention	FALSE	canonical	3	107	junction_1	95.0444574338182	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	-36	True	NA	18	True	AATAAA	-18	NA	46617257	46674518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_2938.nic	chr1	+	1954	7	NIC	ENSG00000132879.14	novel	3320	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	78.8303382094877	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	429	False	NA	15	True	AATAAA	-16	NA	11654842	11662289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_2939.known	chr1	+	3320	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	71.5885232887693	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	443	False	NA	NA	False	ATTAAA	-22	NA	11654856	11663327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_29402.known	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	46617227	46602860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46603910_46615567_46616382_46617123
transcript_29407.known	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	TRUE	canonical	3	412	junction_2	53.7656308021728	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-19	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
transcript_29411.nic	chr11	-	3340	12	NIC	ENSG00000175220.12	novel	3395	13	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	124.625588023017	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	NA	False	NA	-12	True	AATAAA	-16	NA	46700696	46677079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46688172_46688261_46695659_46695756_46695974_46696157_46700550
transcript_29429.known	chr11	-	901	4	FSM	ENSG00000175220.12	ENST00000529960.5	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	41.4273125150814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTCCAGACATGTCCTGA	-3	True	NA	NA	False	NA	NA	NA	46700603	46687690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46688261_46695659_46695756_46695974_46696157_46700550
transcript_29432.known	chr11	-	920	3	FSM	ENSG00000175220.12	ENST00000524594.1	920	3	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_2	50.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGAGCCAGGGAGTC	-15	True	NA	NA	False	NA	NA	NA	46700615	46695082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46695756_46695974_46696157_46700550
transcript_29437.known	chr11	+	2229	5	FSM	ENSG00000175213.3	ENST00000311764.3	2229	5	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_1	11.0113577727726	564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTGTCTGCATCTT	3	True	NA	17	True	CATAAA	-17	NA	46701030	46705912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46701100_46701398_46701677_46702703_46702766_46702983_46703244_46704352
transcript_29443.known	chr11	+	1990	14	FSM	ENSG00000180210.15	ENST00000311907.10	1990	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.58767441850387	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAATGCTCCCAGTGCT	-3	True	NA	NA	False	AATAAA	-16	NA	46719212	46739506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46719315_46719701_46719863_46720522_46720548_46720789_46720841_46723179_46723286_46723381_46723519_46725858_46726174_46726497_46726627_46726710_46726838_46727995_46728164_46728663_46728838_46729379_46729562_46739047_46739119_46739264
transcript_29444.known	chr11	-	7172	44	FSM	ENSG00000175216.15	ENST00000529230.6	7172	44	0	0	0	0	multi-exon	TRUE	canonical	3	810	junction_28	90.5203454297571	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAAGTGAGCTGAGTA	-12	True	NA	NA	False	NA	NA	NA	46846280	46743047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46754887_46755068_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_29446.known	chr11	-	6532	43	FSM	ENSG00000175216.15	ENST00000312055.9	6532	43	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	173.722385201739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAAGATGCTCCATAT	NA	False	NA	-7	True	AATAAA	-21	NA	46846308	46743535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_29450.known	chr11	-	8155	38	FSM	ENSG00000134569.10	ENST00000378623.6	8155	38	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_30	10.849457947971	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAGCTCATCTGGAGA	3	True	NA	NA	False	AATAAA	-22	NA	46918550	46856716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46859316_46862605_46862748_46864447_46864536_46865118_46865187_46867978_46868115_46868599_46868714_46868987_46869133_46871524_46871634_46873099_46873235_46873374_46873594_46874799_46875104_46875455_46875682_46875803_46875967_46876465_46876638_46876743_46876831_46877198_46877340_46878906_46879039_46879125_46879316_46881701_46881904_46883870_46883977_46886090_46886173_46886324_46886534_46889410_46889534_46889943_46890121_46890276_46890495_46892972_46893130_46894588_46894820_46895165_46895292_46895883_46896019_46896209_46896336_46896868_46896995_46898557_46898678_46898903_46899033_46899386_46899504_46899862_46899977_46900261_46900379_46902782_46902930_46918327
transcript_29460.known	chr11	+	1651	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	103.313842247784	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	25	True	NA	24	True	AATAAA	-21	NA	46936777	47162247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
transcript_29461.known	chr11	+	1166	9	FSM	ENSG00000149179.14	ENST00000378618.6	1166	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	111.99211746815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTCCCTCTGGGGGAG	1	True	NA	NA	False	AATACA	-18	NA	46936753	47164385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47164092
transcript_29465.known	chr11	+	1527	8	FSM	ENSG00000149179.14	ENST00000525895.5	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	104.729388893277	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	26	True	NA	22	True	AATAAA	-19	NA	46936778	47162245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_29468.nic	chr11	+	1235	8	NIC	ENSG00000149179.14	novel	1916	8	NA	NA	-9	214	combination_of_known_junctions	FALSE	canonical	3	12	junction_7	117.618893387213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGTGGCTCCACCTGT	-32	True	NA	3	True	AATAAA	-17	NA	46936720	47160025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47159632
transcript_29469.known	chr11	+	1916	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_7	27.0788719507008	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	15	True	NA	24	True	AATAAA	-21	NA	46936767	47162247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
transcript_29470.known	chr11	+	1069	8	FSM	ENSG00000149179.14	ENST00000527784.5	1069	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.670744472008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAATGGCCTGCTCTCC	27	True	NA	NA	False	GGGGCT	-31	NA	46936779	47161816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_29475.known	chr11	+	825	3	FSM	ENSG00000149179.14	ENST00000522712.6	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAATATGAAGAAAGAAA	-8	True	NA	NA	False	ATTAAA	-28	NA	46936744	47053002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387
transcript_29482.known	chr11	-	2773	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_6	49.6429921204057	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-5	True	NA	-6	True	AATAAA	-39	NA	47176879	47164300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_29483.known	chr11	-	1723	3	FSM	ENSG00000149182.15	ENST00000526185.5	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	34	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	47176868	47174406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47175924_47176515_47176635_47176781
transcript_29501.nnic	chr11	-	2092	11	NIC	ENSG00000165912.16	novel	1873	11	NA	NA	-147	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	189.445744211898	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	1419	False	NA	-5	True	ATTAAA	-38	NA	47185566	47177521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47178047_47178365_47178488_47178893_47179031_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47185265
transcript_29504.known	chr11	-	1845	11	FSM	ENSG00000165912.16	ENST00000532457.5	1845	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.794039388526	3422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACACACACCCACACACA	-16	True	NA	-40	True	ATTAAA	-3	NA	47186440	47177556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179028_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_29519.nnic	chr11	-	1845	10	NIC	ENSG00000165912.16	novel	1873	11	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	197.938261979728	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	492	False	NA	-5	True	ATTAAA	-38	NA	47186493	47177521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47178047_47178365_47178488_47178893_47179031_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47183003_47183070_47186348
transcript_2952.known	chr1	+	959	6	FSM	ENSG00000132879.14	ENST00000376768.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	81.5794091667744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTCTTCTTTGTGG	-10	True	NA	NA	False	NA	NA	NA	11654880	11661391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658532_11658629_11658735_11658872_11661129
transcript_29550.known	chr11	-	1873	11	FSM	ENSG00000165912.16	ENST00000298838.11	1873	11	0	0	0	0	multi-exon	FALSE	canonical	2	315	junction_3	69.1450648998177	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-10	True	NA	-5	True	ATTAAA	-38	NA	47186434	47177521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_29556.known	chr11	+	1815	10	FSM	ENSG00000134574.12	ENST00000256996.9	1815	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	56.8671833592088	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	-4	True	NA	14	True	AATAAA	-15	NA	47214973	47239217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_29560.known	chr11	+	1591	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	86.42039328191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	14	True	NA	-14	True	NA	NA	NA	47214991	47239189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_29564.known	chr11	+	717	6	FSM	ENSG00000134574.12	ENST00000378600.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	111.030446274884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	56	False	NA	NA	False	NA	NA	NA	47215136	47238849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47237836_47238002_47238137_47238184_47238799
transcript_29569.known	chr11	-	1366	11	FSM	ENSG00000134575.13	ENST00000533929.7	1366	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	38.5576192211086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTCCCCAGCCCATG	211	False	NA	NA	False	NA	NA	NA	47248628	47240051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248484
transcript_2957.known	chr1	+	2928	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	57.2174798466343	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	-14	True	NA	NA	False	ATTAAA	-22	NA	11654876	11663327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_29570.nic	chr11	+	1638	10	NIC	ENSG00000025434.19	novel	2731	9	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.0928158782976	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	-8	True	NA	26	True	ATTAAA	-16	NA	47248891	47268845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29572.known	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	34.8800413410107	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	13	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29575.known	chr11	+	1501	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	31.3876966341909	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	16	False	NA	-7	True	NA	NA	NA	47248915	47268812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29577.known	chr11	+	1330	9	FSM	ENSG00000025434.19	ENST00000407404.5	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.2893829066666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAACATTCCTGGGAGCT	21	False	NA	-38	True	NA	NA	NA	47248955	47268781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29582.known	chr11	+	1480	9	FSM	ENSG00000025434.19	ENST00000405853.7	1480	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	39.0920388314552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	15	True	NA	24	True	ATTAAA	-14	NA	47257997	47268843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29586.known	chr11	+	1704	8	FSM	ENSG00000025434.19	ENST00000481020.5	1704	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	29.2372421156752	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAAAGGGTTGCGAG	24	False	NA	12	True	ATTAAA	-2	NA	47248923	47268831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29587.known	chr11	+	1352	8	FSM	ENSG00000025434.19	ENST00000405576.5	1352	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	36.2997723049023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	16	False	NA	24	True	ATTAAA	-14	NA	47248915	47268843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29598.nic	chr11	+	1410	5	NIC	ENSG00000025434.19	novel	1704	8	NA	NA	-43	0	intron_retention	TRUE	canonical	3	10	junction_1	45.4230117891802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	26	True	ATTAAA	-16	NA	47248872	47268845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47249000_47261240_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29600.known	chr11	-	2200	11	FSM	ENSG00000134575.13	ENST00000256997.9	2200	11	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_6	15.9314155052211	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTGTTTCCTGTGCT	NA	False	NA	-3	True	AATGAA	-24	NA	47248906	47239304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_29601.known	chr11	+	2731	9	FSM	ENSG00000025434.19	ENST00000467728.5	2731	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	31.3876966341909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	-4	True	NA	26	True	ATTAAA	-16	NA	47257978	47268845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_29602.known	chr11	+	5873	34	FSM	ENSG00000110514.19	ENST00000349238.7	5873	34	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	34.9632103642033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	-6	True	NA	15	True	AATAAA	-15	NA	47269673	47330031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47288967_47289028_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_29607.known	chr11	+	6005	33	FSM	ENSG00000110514.19	ENST00000342922.8	6005	33	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	28.3972242261458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	0	True	NA	15	True	AATAAA	-15	NA	47269375	47330031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47269645_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_29608.known	chr11	+	4988	33	FSM	ENSG00000110514.19	ENST00000395344.7	4988	33	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	28.6590272645462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAACTGCCTTCCCCTCA	4	True	NA	NA	False	NA	NA	NA	47269683	47329357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295568_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_2961.known	chr1	+	822	6	FSM	ENSG00000132879.14	ENST00000376760.5	822	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.4165860480036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCCAGGTGTCC	19	True	NA	NA	False	NA	NA	NA	11654909	11661349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_29613.known	chr11	+	5823	33	FSM	ENSG00000110514.19	ENST00000402192.6	5823	33	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_21	25.38837009218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGCTCCCTGGCTGCC	20	True	NA	14	True	AATAAA	-14	NA	47270155	47330030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295577_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_29625.known	chr11	+	2330	10	FSM	ENSG00000165915.14	ENST00000362021.9	2330	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	66.2225950772501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	-20	True	NA	26	True	AATAAA	-14	NA	47408589	47416496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415038_47415160_47415287
transcript_29626.nic	chr11	+	2346	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	147	junction_1	30.1887069065795	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47	False	NA	26	True	AATAAA	-14	NA	47408552	47416496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_29628.nic	chr11	+	2255	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	38	junction_9	56.5628678966277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCCTTGGTTCTGC	47	False	NA	25	True	AATAAA	-13	NA	47408552	47416495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47414476_47414776_47414910_47415059_47415160_47415287_47415497_47416324
transcript_29631.nic	chr11	+	2471	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	147	junction_1	31.9938959021873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGGCTGCCTTGGTTCT	47	False	NA	23	True	AATAAA	-11	NA	47408552	47416493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059
transcript_29633.nic	chr11	+	3084	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	147	junction_1	31.8629879327096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47	False	NA	26	True	AATAAA	-14	NA	47408552	47416496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47414476_47414776_47414910_47415059_47415160_47415287
transcript_29635.nic	chr11	+	2238	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	17	junction_4	65.8174558912755	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47	False	NA	26	True	AATAAA	-14	NA	47408552	47416496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_2964.nic	chr1	+	2160	6	NIC	ENSG00000132879.14	novel	822	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	76.1698102925299	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	440	False	NA	15	True	AATAAA	-16	NA	11654853	11662289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_29651.nic	chr11	+	4411	6	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	147	junction_1	34.1443992479001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47	False	NA	26	True	AATAAA	-14	NA	47408552	47416496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47414476_47414776_47414910_47415059_47415160_47415287
transcript_29653.known	chr11	+	856	3	FSM	ENSG00000165915.14	ENST00000531974.5	856	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	41.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTGGCATCCTGACC	-26	True	NA	NA	False	GGGGCT	-6	NA	47408583	47412393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47408663_47410086_47410396_47411925
transcript_29656.nic	chr11	-	1457	12	NIC	ENSG00000165916.9	novel	1540	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_11	635.208744241081	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	180	False	NA	-9	True	AATAAA	-16	NA	47426268	47418774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426116
transcript_29657.known	chr11	-	1540	12	FSM	ENSG00000165916.9	ENST00000298852.8	1540	12	0	0	0	0	multi-exon	FALSE	canonical	3	2014	junction_11	141.657893100547	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	9	True	NA	-9	True	AATAAA	-16	NA	47426439	47418774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
transcript_2966.nic	chr1	+	2424	6	NIC	ENSG00000132879.14	novel	3320	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	42	junction_1	73.1874306148262	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	440	False	NA	15	True	AATAAA	-16	NA	11654853	11662289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_29693.known	chr11	-	3650	16	FSM	ENSG00000149187.19	ENST00000531165.5	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_15	181.730154044091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAACAAA	43	False	NA	NA	False	AATAAA	-19	NA	47553117	47470315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47500860_47500933_47552991
transcript_2970.nic	chr1	+	2513	6	ISM	ENSG00000132879.14	ENST00000376770.5	3320	7	144	1038	91	0	3prime_fragment	FALSE	canonical	3	77	junction_3	64.0031249237098	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	110	False	NA	15	True	AATAAA	-16	NA	11655000	11662289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_29728.known	chr11	+	894	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_2	40.1746188532013	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	5	True	NA	28	True	AATAAA	-17	NA	47579073	47584562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
transcript_29730.known	chr11	+	2049	5	FSM	ENSG00000213619.11	ENST00000531351.2	2049	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	473.89048049101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTCCTACTTAGACT	70	False	NA	6	True	NA	NA	NA	47579138	47584540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47579159_47579268_47579339_47580524_47580623_47580834_47582469_47584313
transcript_29731.known	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_2	39.668067202166	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	-4	True	NA	20	True	AATAAA	-21	NA	47565598	47573461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
transcript_29735.known	chr11	-	2460	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	64.0433880705538	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	7	True	NA	-2	True	AATAAA	-14	NA	47578969	47572197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
transcript_29736.nic	chr11	-	2390	4	NIC	ENSG00000123444.14	novel	2357	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	69.5908678555519	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-6	True	NA	-1	True	AATAAA	-15	NA	47578982	47572196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47573791_47575592_47575700_47577410_47578029_47578911
transcript_29737.known	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	29.0325487838889	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	6	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
transcript_29742.known	chr11	+	928	3	FSM	ENSG00000110536.14	ENST00000326656.12	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	250.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTCCCCTGAGGGAA	-4	True	NA	NA	False	NA	NA	NA	47565598	47572119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47565797_47565905_47565987_47571470
transcript_29744.known	chr11	+	2272	3	FSM	ENSG00000110536.14	ENST00000527079.2	2272	3	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	45.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	295	False	NA	20	True	AATAAA	-21	NA	47565897	47573461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47565987_47569699_47569892_47571470
transcript_29748.known	chr11	+	1014	2	FSM	ENSG00000110536.14	ENST00000426530.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGCCTAATAATATTTAG	NA	False	NA	26	True	NA	NA	NA	47565429	47571927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47565987_47571470
transcript_29750.known	chr11	-	4583	14	FSM	ENSG00000149187.19	ENST00000310513.10	4583	14	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	107.557167955921	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	43	False	NA	0	True	ATTAAA	-19	NA	47553117	47465932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_29751.known	chr11	-	1413	2	FSM	ENSG00000172247.4	ENST00000302514.4	1413	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCTGCGCTGTCTTGAC	5	True	NA	-4	True	AATAAA	-36	NA	47594411	47589666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47590816_47594147
transcript_29752.known	chr11	-	2522	13	FSM	ENSG00000109919.10	ENST00000302503.8	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_10	99.6617891783116	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTTTATCCTGTGGC	-13	True	NA	-10	True	AGTAAA	-18	NA	47642559	47617316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_29753.nic	chr11	-	1141	13	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_12	332.436836105748	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCCTTTTTTGTT	90	False	NA	-18	True	NA	NA	NA	47642587	47618703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642400
transcript_29758.nnic	chr11	-	1217	12	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	-102	0	combination_of_known_splicesites	FALSE	canonical	3	78	junction_2	346.135763743287	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCCTTTTTTGTT	NA	False	NA	-18	True	NA	NA	NA	47642709	47618703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47618920_47622700_47622777_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_2977.known	chr1	-	1287	6	FSM	ENSG00000116661.11	ENST00000354287.5	1287	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	23.4384299815495	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAATGAAAAAATGGA	0	True	NA	-39	True	AATAAA	-19	NA	11654429	11648386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
transcript_29775.known	chr11	-	4035	17	FSM	ENSG00000109920.13	ENST00000263773.10	4035	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	52.3837999767104	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTATTCTGATTATG	-10	True	NA	-9	True	AATAAA	-43	NA	47767341	47716493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_29784.known	chr11	-	2515	11	FSM	ENSG00000109920.13	ENST00000534003.5	2515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.8698305591667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCACAAAAAAAGAGAAA	-2	True	NA	NA	False	AATGAA	-26	NA	47767286	47731839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_29787.nic	chr11	-	1557	9	ISM	ENSG00000109920.13	ENST00000534003.5	2515	11	-76	4874	-21	-4232	5prime_fragment	FALSE	canonical	0	0	junction_8	54.4581261153926	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGATGAGAATTCAGATAAA	97	False	47767381	NA	False	NA	NA	NA	47767362	47736713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_29791.nic	chr11	-	1177	7	ISM	ENSG00000109920.13	ENST00000534003.5	2515	11	-174	14456	-17	-2479	5prime_fragment	FALSE	canonical	0	0	junction_6	58.0682070212837	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAGAGATGGAG	-1	True	NA	NA	False	AATAAA	-2	NA	47767460	47746295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_29796.known	chr11	-	5376	36	FSM	ENSG00000030066.13	ENST00000378460.6	5376	36	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_30	82.9448304474678	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGAGGTGTGTGTTTC	87	False	NA	-3	True	NA	NA	NA	47848467	47778086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_2980.known	chr1	+	1896	5	FSM	ENSG00000132879.14	ENST00000251546.8	1896	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	94.1674041269058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	1	True	NA	15	True	AATAAA	-16	NA	11654374	11662289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654582_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_29805.nic	chr11	-	1694	9	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-155	29364	-22	0	5prime_fragment	FALSE	canonical	3	634	junction_3	87.9797561942519	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	65	False	NA	NA	False	NA	NA	NA	47848489	47821375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_29809.nic	chr11	-	997	4	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	1	47495	1	-6	5prime_fragment	FALSE	canonical	3	725	junction_1	83.1745153277132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGCCACTGTGTCTTG	5	True	NA	-8	True	ATTAAA	-34	NA	47848333	47839506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47840066_47840377_47840589_47847847_47847960_47848218
transcript_29810.known	chr11	-	1537	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	82.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-1	True	NA	-2	True	ATTAAA	-40	NA	47848555	47839500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47840589_47847847_47847960_47848218
transcript_29811.known	chr11	-	1726	2	FSM	ENSG00000134817.12	ENST00000257254.3	1726	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTCATGAAAGTGT	-11	True	NA	10	True	AATAAA	-28	NA	57237235	57233576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57233859_57235791
transcript_2983.known	chr1	+	1734	5	FSM	ENSG00000132879.14	ENST00000376762.8	1734	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	56.7334777710657	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	19	True	NA	17	True	AATAAA	-18	NA	11654909	11662291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_29855.known	chr11	-	5820	12	FSM	ENSG00000149115.14	ENST00000358252.8	5820	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_11	96.0424320825466	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	-19	True	NA	-22	True	AATAAA	-17	NA	57324952	57299641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57312533_57313890_57317817_57317888_57320078_57320713_57321791_57321951_57324839
transcript_2987.nic	chr1	+	2070	5	NIC	ENSG00000132879.14	novel	2928	6	NA	NA	-21	0	intron_retention	FALSE	canonical	3	142	junction_3	41.8173110087198	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	422	False	NA	15	True	AATAAA	-16	NA	11654835	11662289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11654953_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_29881.nic	chr11	-	3785	8	NIC	ENSG00000149115.14	novel	5820	12	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	161.537889660347	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	9164	False	NA	-22	True	AATAAA	-17	NA	57311534	57299641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57311237
transcript_29887.known	chr11	-	2831	17	FSM	ENSG00000149136.9	ENST00000278412.7	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_16	89.0587718517946	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-17	True	NA	-25	True	AATAAA	-19	NA	57335892	57325987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_29898.nic	chr11	-	2170	16	ISM	ENSG00000149136.9	ENST00000278412.7	2831	17	1	884	1	0	5prime_fragment	FALSE	canonical	3	777	junction_15	89.6161195817409	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGTAAAGGTAAAGA	-16	True	NA	NA	False	AATACA	-20	NA	57335891	57326871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_2990.nic	chr1	+	2384	5	ISM	ENSG00000132879.14	ENST00000376760.5	822	6	95	-940	95	0	3prime_fragment	FALSE	canonical	3	93	junction_1	66.8393596618041	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	114	False	NA	15	True	AATAAA	-16	NA	11655004	11662289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_29901.nic	chr11	-	2152	15	ISM	ENSG00000149136.9	ENST00000278412.7	2831	17	1	1438	1	-554	5prime_fragment	FALSE	canonical	3	777	junction_14	81.2374951130628	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTCGAGAACATGGC	-16	True	NA	-3	True	AAAAAG	-44	NA	57335891	57327425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_29908.known	chr11	+	3792	12	FSM	ENSG00000109991.10	ENST00000263314.3	3792	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.21287855128421	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGGATTTGAACCTAG	-1	True	NA	NA	False	AATAAA	-16	NA	57338351	57372396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57338670_57346543_57346680_57347115_57347188_57347414_57347479_57348169_57348264_57348626_57348705_57349756_57349899_57350761_57350899_57368008_57368103_57368371_57368438_57369360_57369439_57369883
transcript_29917.nic	chr11	-	2634	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	34.8504836841291	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5728	False	NA	-1	True	AATAAA	-20	NA	57427172	57406953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426317_57426587_57426653_57427061
transcript_29918.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395123.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	42.8783886476364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5955	False	NA	-1	True	AATAAA	-20	NA	57426945	57406953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57426885
transcript_29919.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	20.4765705338663	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-11	True	NA	-1	True	AATAAA	-20	NA	57427121	57406953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
transcript_29922.nic	chr11	-	2707	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	34.6222215470364	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5728	False	NA	-1	True	AATAAA	-20	NA	57427172	57406953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426390_57426587_57426653_57427061
transcript_29924.nic	chr11	-	2709	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	44.2788367577038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5728	False	NA	-1	True	AATAAA	-20	NA	57427172	57406953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425710_57425988_57426353_57426587_57426653_57427061
transcript_29925.known	chr11	-	1879	14	FSM	ENSG00000134802.18	ENST00000533524.5	1879	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	51.1007821939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGAGGATGGTTTTGTTC	-11	True	NA	NA	False	AAGAAA	-43	NA	57427121	57407769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425710_57425988_57426390_57426587_57426653_57427061
transcript_29930.nic	chr11	-	2544	13	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	43.7075985003371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	4	True	NA	-1	True	AATAAA	-20	NA	57427147	57406953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426317_57427061
transcript_29936.known	chr11	-	573	3	FSM	ENSG00000134802.18	ENST00000530316.5	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTGGACCAGATGCT	-11	True	NA	NA	False	AATGAA	-14	NA	57427121	57426039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57426390_57426587_57426751_57427061
transcript_29937.known	chr11	+	2224	3	FSM	ENSG00000186907.8	ENST00000335099.8	2224	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	9	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTAAGATTTGTTGA	0	True	NA	15	True	ATTAAA	-17	NA	57460527	57477534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57460897_57467608_57468091_57476161
transcript_29938.nic	chr11	-	2698	16	NIC	ENSG00000149150.9	novel	2514	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	40.9403902711681	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	NA	False	NA	-5	True	AATAAA	-16	NA	57515784	57484533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515099_57515202_57515443
transcript_29942.known	chr11	-	2358	15	FSM	ENSG00000149150.9	ENST00000528450.5	2358	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	32.8202432554504	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	0	True	NA	-7	True	AATAAA	-14	NA	57514885	57484535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514780
transcript_29944.known	chr11	-	2514	15	FSM	ENSG00000149150.9	ENST00000278426.8	2514	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_14	19.233262004843	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	27	True	NA	-5	True	AATAAA	-16	NA	57515702	57484533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
transcript_2996.nic	chr1	-	2239	5	NIC	ENSG00000116661.11	novel	1287	6	NA	NA	-399	0	intron_retention	FALSE	canonical	3	404	junction_2	24.0052077683156	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAATGAAAAAATGGA	-10	True	NA	-39	True	AATAAA	-19	NA	11654828	11648386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_11648829_11649086_11649875_11649944_11650075_11650465_11650835_11654318
transcript_29984.known	chr11	-	668	3	FSM	ENSG00000134809.9	ENST00000257245.9	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	116	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGCAAAGCAGTGTGC	-12	True	NA	-8	True	TATAAA	-19	NA	57530754	57528463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57528919_57530118_57530235_57530657
transcript_29985.known	chr11	-	530	3	FSM	ENSG00000134809.9	ENST00000525158.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	693	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAAGACTGCCAGGCC	8	True	NA	-18	True	AATAAA	-22	NA	57530734	57528640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57528919_57530118_57530294_57530657
transcript_29990.known	chr11	-	1219	4	FSM	ENSG00000156587.16	ENST00000287156.9	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	70.4130669691358	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAGTGCAGCTGAGTC	-23	True	NA	-11	True	ATTAAA	-13	NA	57567672	57551661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567584
transcript_29991.known	chr11	-	1573	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	237.885593417415	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCTGAGTCTTTGAT	17	True	NA	-5	True	ATTAAA	-19	NA	57568284	57551655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
transcript_29993.known	chr11	+	1830	8	FSM	ENSG00000149131.17	ENST00000278407.9	1830	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	162.065116668629	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	-3	True	NA	17	True	AATAAA	-17	NA	57597684	57614848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_29996.nic	chr11	+	2270	7	ISM	ENSG00000149131.17	ENST00000278407.9	1830	8	83	3	-35	0	3prime_fragment	FALSE	canonical	3	480	junction_2	77.9650919037203	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCTCTGCTTTGCCT	80	False	NA	14	True	AATAAA	-14	NA	57597767	57614845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_29998.known	chr11	+	1004	6	FSM	ENSG00000149131.17	ENST00000531133.5	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	239.458221825854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCAGGATCAGGTTAG	41	True	NA	NA	False	NA	NA	NA	57598270	57614581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57598322_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_3.known	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00004_+_0_500
transcript_30.known	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00079_+_0_600
transcript_30001.known	chr11	+	907	4	FSM	ENSG00000149131.17	ENST00000531797.5	907	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	315.421411236883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTCTCTAGTTCAAG	3	True	NA	-41	True	NA	NA	NA	57598232	57614790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57598322_57602034_57602170_57611716_57611937_57614327
transcript_30002.nnic	chr11	+	890	3	NIC	ENSG00000149131.17	novel	1723	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	335.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCTCTGCTTTGCCT	9	False	NA	14	True	AATAAA	-14	NA	57598169	57614845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_57598322_57611716_57611937_57614327
transcript_30003.known	chr11	+	2231	7	FSM	ENSG00000149131.17	ENST00000403558.1	2231	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	236.17960444449	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGACTCTATAAATAAAAC	115	False	NA	-17	True	NA	NA	NA	57597802	57614814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606380_57606548_57611716_57611937_57614327
transcript_30004.known	chr11	+	841	3	FSM	ENSG00000149131.17	ENST00000528996.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTTTTTTAT	-1	True	NA	26	True	AATAAA	-26	NA	57598228	57614857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57598329_57611725_57611937_57614327
transcript_30005.known	chr11	+	1828	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	26	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGTATAATTTATTT	3	True	NA	33	True	AATAAA	-19	NA	57657761	57661865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57657861_57659454_57660083_57660764
transcript_30008.known	chr11	+	4443	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	39.3101673387223	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	51	True	NA	12	True	AATAAA	-18	NA	57668113	57701182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_30010.nic	chr11	+	3604	11	NIC	ENSG00000156599.11	novel	4443	12	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	124.481966565443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGATTCTATTTTTTTCCTC	-51	True	NA	27	True	TTTAAA	-29	NA	57668011	57700363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_57668188_57672020_57673195_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_30011.known	chr11	+	2817	11	FSM	ENSG00000156599.11	ENST00000527985.5	2817	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	124.88478690377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGATTCTATTTTTTTCCTC	2459	False	NA	27	True	TTTAAA	-29	NA	57667746	57700363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57668188_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_30017.known	chr11	-	1203	5	FSM	ENSG00000156603.20	ENST00000431606.5	1099	5	-108	4	-102	0	multi-exon	FALSE	canonical	3	401	junction_2	54.901616551792	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTGTGACTGCC	NA	False	NA	-5	True	TTTAAA	-25	NA	57712323	57703713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57704107_57704301_57704397_57704718_57704816_57704972_57705230_57711962
transcript_30018.nic	chr11	-	694	4	ISM	ENSG00000156603.20	ENST00000431606.5	1099	5	-43	643	-37	-123	5prime_fragment	FALSE	canonical	3	401	junction_1	60.9316557026532	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGATCCTGAACGGAA	NA	False	NA	-22	True	AAAAAG	-7	NA	57712258	57704352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_57704397_57704718_57704816_57704972_57705230_57711962
transcript_30020.known	chr11	-	1088	3	FSM	ENSG00000156603.20	ENST00000528205.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	33.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGCCTCAAGTTGGAC	8	True	NA	NA	False	NA	NA	NA	57712207	57704229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57704816_57704972_57705230_57711962
transcript_30022.nnic	chr11	+	5401	20	NIC	ENSG00000198561.16	novel	6670	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_11	334.459327200254	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTAAAGTGTGTATGTG	-25	True	NA	1	True	AATAAA	-1	NA	57761801	57818431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_3003.known	chr1	+	1444	6	FSM	ENSG00000116663.11	ENST00000376753.9	1444	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	2.41660919471891	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGGGTTGGTTTTA	-13	True	NA	NA	False	AATAAA	-30	NA	11664199	11674354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11664256_11668655_11668945_11671265_11671393_11671927_11672024_11673276_11673413_11673614
transcript_30030.known	chr11	+	1697	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	265.028223371915	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCGCGTTTGTGTGT	16	True	NA	21	True	AATAAA	-18	NA	57712613	57740969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_30033.known	chr11	+	1645	8	FSM	ENSG00000213593.10	ENST00000278422.9	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	104.653168677712	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	-5	True	NA	25	True	AATAAA	-22	NA	57712592	57740973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57737912_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_30039.known	chr11	+	1521	7	FSM	ENSG00000213593.10	ENST00000378312.8	1521	7	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	235.643091701553	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	5	True	NA	25	True	AATAAA	-22	NA	57712602	57740973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_30043.known	chr11	+	829	6	FSM	ENSG00000213593.10	ENST00000528110.5	829	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	326.361394775791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	16	True	NA	NA	False	NA	NA	NA	57712613	57740369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_30047.known	chr11	+	6135	19	FSM	ENSG00000198561.16	ENST00000358694.10	6135	19	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	237.063705820364	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30048.known	chr11	+	6024	19	FSM	ENSG00000198561.16	ENST00000534579.5	6024	19	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	250.798281050285	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-26	True	NA	12	True	ATTAAA	-18	NA	57761800	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57789036_57789156_57791491_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30049.known	chr11	+	6099	19	FSM	ENSG00000198561.16	ENST00000529526.5	6099	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	313.808647560819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762120_57789036_57789156_57791493_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30055.known	chr11	+	5745	18	FSM	ENSG00000198561.16	ENST00000528232.5	5745	18	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	333.689493692403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30057.known	chr11	+	6016	18	FSM	ENSG00000198561.16	ENST00000428599.6	6016	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	244.791500858861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30059.known	chr11	+	5727	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	199.86236475072	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30061.known	chr11	+	5749	17	FSM	ENSG00000198561.16	ENST00000532463.5	5749	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	239.586354147623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762069_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30062.known	chr11	+	5800	17	FSM	ENSG00000198561.16	ENST00000426142.6	5800	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	230.520064202663	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762120_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30065.known	chr11	+	5655	16	FSM	ENSG00000198561.16	ENST00000532245.5	5655	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	225.086018125417	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_30067.known	chr11	+	1192	4	FSM	ENSG00000211450.11	ENST00000534355.6	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	2587	junction_3	164.991582276861	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTATCTTTTTCAAC	16	True	NA	5	True	AGTAAA	-20	NA	57741490	57743550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742248_57742862
transcript_30068.known	chr11	+	469	4	FSM	ENSG00000211450.11	ENST00000528798.1	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	1296.14436781642	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAGTAATAGAGTAAAAC	110	False	NA	-6	True	AATAAA	-16	NA	57741681	57743038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742228_57742862
transcript_30069.known	chr11	+	5776	11	FSM	ENSG00000186660.15	ENST00000316059.7	5776	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.94203556244326	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTTCAGCTTATTGG	-12	True	NA	NA	False	TATAAA	-17	NA	58579062	58621550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_58579623_58584855_58584885_58609829_58610040_58610297_58610335_58610949_58611055_58611603_58611739_58612277_58612329_58612761_58612841_58614228_58614344_58616715_58616816_58617195
transcript_30079.nnic	chr11	-	1789	4	NNC	ENSG00000156689.7	novel	566	5	NA	NA	-1677	-60187	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1.24721912892465	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCAAGTTCCCGAGTTT	NA	False	NA	-6	True	AATATA	-14	NA	58905892	58894916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_58895627_58899651_58899759_58904155_58904262_58905026
transcript_30080.nnic	chr11	-	2248	3	NNC	ENSG00000156689.7	novel	566	5	NA	NA	-1677	-63753	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAACAATAGTGAGTTA	NA	False	NA	NA	False	GATAAA	-12	NA	58905892	58898482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_58899759_58904155_58904262_58905026
transcript_30081.nic	chr11	+	1669	7	NIC	ENSG00000166840.14	novel	1627	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	5.31507290636732	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATCTGTATGGATACTT	NA	False	NA	NA	False	AATAAA	-18	NA	58927614	58956406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_30083.known	chr11	+	3506	4	FSM	ENSG00000189057.11	ENST00000343597.4	3506	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	16.0485374896143	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGAGTATTGGAGGC	0	True	NA	15	True	AATAAA	-25	NA	59107236	59127412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59107297_59108667_59108713_59109539_59109707_59124178
transcript_30086.known	chr11	+	2364	3	FSM	ENSG00000189057.11	ENST00000529618.5	2364	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	44.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTATCAACAGGGTAAAC	-1	True	NA	NA	False	ATTAAA	-19	NA	59107235	59126436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59107297_59108667_59108713_59124178
transcript_30089.known	chr11	+	3676	5	FSM	ENSG00000166801.17	ENST00000674617.1	3676	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.4684369298311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTGAGAAACCGTA	46	True	NA	6	True	ATTAAA	-3	NA	59142915	59155024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59142947_59143082_59143305_59145826_59145857_59148835_59148954_59151749
transcript_30092.known	chr11	+	2221	4	FSM	ENSG00000166801.17	ENST00000529985.3	2221	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.9764548122573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGTCTACTGGATTT	-10	True	NA	NA	False	NA	NA	NA	59142859	59153504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59142947_59143082_59143305_59148796_59148954_59151749
transcript_30094.known	chr11	+	3592	4	FSM	ENSG00000166801.17	ENST00000361723.7	3592	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	37.1872140511882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	-46	True	NA	18	True	ATTAAA	-15	NA	59144778	59155036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59144897_59145826_59145857_59148796_59148954_59151749
transcript_30096.known	chr11	+	4203	7	FSM	ENSG00000166801.17	ENST00000676340.1	4203	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.767377501209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACATTGCTTCTGTTTGT	41	True	NA	-30	True	TATAAA	-44	NA	59142910	59154988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59142947_59143082_59143305_59143496_59143696_59144537_59144897_59145826_59145857_59148835_59148954_59151749
transcript_30099.known	chr11	-	880	4	FSM	ENSG00000245571.7	ENST00000531708.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.17726659862414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACCGGCAAGGAATGGA	NA	False	NA	NA	False	NA	NA	NA	59143015	59135289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142870
transcript_30100.known	chr11	-	2063	4	FSM	ENSG00000245571.7	ENST00000658798.1	2063	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	10.8730042868667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAAATATGTAACTCCC	NA	False	NA	NA	False	NA	NA	NA	59142758	59134105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142614
transcript_30106.known	chr11	+	2183	4	FSM	ENSG00000166801.17	ENST00000682018.1	2183	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.9214026840587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGTCTACTGGATTT	-11	True	NA	NA	False	NA	NA	NA	59142858	59153504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59142947_59143082_59143305_59148835_59148954_59151749
transcript_30109.known	chr11	-	2659	3	FSM	ENSG00000245571.7	ENST00000532845.2	2659	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTGATTTTGCCAATAA	NA	False	NA	-60	True	ATTAAA	-22	NA	59142801	59134020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59136282_59139956_59140168_59142614
transcript_30110.nic	chr11	-	1839	3	NIC	ENSG00000245571.7	novel	880	4	NA	NA	-76	415	intron_retention	FALSE	canonical	3	18	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTATAACCATAATACAG	NA	False	NA	NA	False	ATTAAA	-5	NA	59143091	59134874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_59136282_59139956_59140168_59142870
transcript_30113.known	chr11	-	4129	19	FSM	ENSG00000166889.14	ENST00000300146.10	4129	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_18	11.2717553706511	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-19	True	NA	-2	True	AATAAA	-22	NA	59669037	59636715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_30117.nnic	chr11	-	4182	18	NIC	ENSG00000166889.14	novel	4129	19	NA	NA	-143	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_12	20.0647740009536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	364	False	NA	-2	True	AATAAA	-22	NA	59669180	59636715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_30121.known	chr11	-	4713	14	FSM	ENSG00000110048.12	ENST00000263847.6	4713	14	0	0	0	0	multi-exon	TRUE	canonical	3	360	junction_3	35.4387545695921	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTCTGATTCACT	-23	True	NA	-2	True	ATTAAA	-18	NA	59615774	59574397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59576720_59576804_59577026_59578148_59578331_59580173_59580270_59581450_59581555_59593603_59593725_59594009_59594256_59600495_59600628_59600818_59600874_59601282_59601386_59601639_59601839_59608483_59608735_59610380_59610590_59615302
transcript_30128.nnic	chr11	+	3077	11	NNC	ENSG00000166900.17	novel	6154	11	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_10	207.218628506223	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTCTGGCTCTGTCTCGA	12	False	NA	23	True	AATAAA	-25	NA	59755357	59802706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800777
transcript_30129.known	chr11	+	6154	11	FSM	ENSG00000166900.17	ENST00000337979.9	6154	11	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_6	63.0318173623449	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTACTGTTGTTTTTT	-1	True	NA	7	True	AATAAA	-16	NA	59755375	59805878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_3013.known	chr1	-	1002	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	1048.27068903981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGAGTTGTTTCAAT	-2	True	NA	1	True	NA	NA	NA	11691477	11674524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_30130.known	chr11	+	1571	10	FSM	ENSG00000166900.17	ENST00000529177.5	1571	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	207.599567068223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGGAGGGACCAGGATG	6	True	NA	NA	False	NA	NA	NA	59755451	59801485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59800854
transcript_30131.nic	chr11	+	3167	10	NIC	ENSG00000166900.17	novel	6154	11	NA	NA	-294	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_8	199.949993748437	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCTGTCTCGATG	509	False	NA	25	True	AATAAA	-27	NA	59755081	59802708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59797282_59797397_59800854
transcript_30132.nic	chr11	+	2907	10	NIC	ENSG00000166900.17	novel	6154	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_2	203.292345595642	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCTGTCTCGATG	7	False	NA	25	True	AATAAA	-27	NA	59755352	59802708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_59755636_59773210_59773295_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_30134.nnic	chr11	+	2803	9	NIC	ENSG00000166900.17	novel	6154	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	231.328466417343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCTGTCTCGATG	5	True	NA	25	True	AATAAA	-27	NA	59755381	59802708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_59755636_59773210_59773295_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_30135.known	chr11	+	690	4	FSM	ENSG00000166900.17	ENST00000530498.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_2	58.0861429258304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTAGTTTTGTGACTTG	13	True	NA	6	True	ATTAAA	-16	NA	59755458	59789201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872
transcript_30136.nic	chr11	+	1100	2	ISM	ENSG00000166900.17	ENST00000530498.1	690	4	-133	15201	-50	-15201	5prime_fragment	FALSE	canonical	3	753	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGTCCCTCTGACTTAA	210	False	NA	NA	False	NA	NA	NA	59755325	59774000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_59755636_59773210
transcript_30137.known	chr11	-	574	4	FSM	ENSG00000166902.5	ENST00000534340.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	476.816526559221	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCGGGACTCTAGAG	5629	False	NA	-27	True	NA	NA	NA	59810300	59806534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810239
transcript_30138.known	chr11	-	1083	4	FSM	ENSG00000166902.5	ENST00000300151.5	1083	4	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_3	17.7200451466693	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCTCATTGGTCAT	-13	True	NA	-5	True	AATAAA	-21	NA	59810778	59806139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810603
transcript_30139.known	chr11	+	1499	4	FSM	ENSG00000149507.7	ENST00000278855.7	1499	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTGTAGCTGTTAAC	-5	True	NA	NA	False	ATTAAA	-27	NA	60040408	60048044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60040524_60043468_60043648_60044670_60044775_60046943
transcript_30140.known	chr11	+	1961	7	FSM	ENSG00000166961.15	ENST00000405633.4	1961	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTTGTTGCAATGAC	-1	True	NA	NA	False	AATAAA	-21	NA	60756866	60776733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60757059_60763705_60763959_60767532_60767656_60771290_60771348_60773391_60773485_60773836_60773951_60775604
transcript_30141.known	chr11	+	1851	4	FSM	ENSG00000110104.13	ENST00000227520.10	1851	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	42.2084772949174	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTCCAATGGGGGAA	4	True	NA	23	True	AATAAA	-14	NA	60842112	60851081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60842883_60847923_60848054_60849939_60850015_60850205
transcript_30143.known	chr11	-	2337	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	13.5882302011704	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATGTCCCTGCGGTT	1	True	NA	43	True	AATAAA	-20	NA	60906585	60890546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
transcript_30147.known	chr11	-	943	10	FSM	ENSG00000110107.9	ENST00000541371.5	943	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.4557634603134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGACATGGTAGGCCTCC	17	True	NA	NA	False	NA	NA	NA	60906569	60898540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60898579_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
transcript_3017.known	chr1	-	872	9	FSM	ENSG00000116670.15	ENST00000376667.7	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_8	702.565966653666	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTCAGACTTTGGGG	15	True	NA	NA	False	CATAAA	-37	NA	11691609	11674747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_30170.known	chr11	+	3480	11	FSM	ENSG00000006118.15	ENST00000005286.8	3480	11	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	45.6321158834433	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	7	True	NA	23	True	AATAAA	-18	NA	60924480	60937159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60924734_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931685_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_30175.known	chr11	+	3498	11	FSM	ENSG00000006118.15	ENST00000453848.7	3498	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	47.025950282796	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	-14	True	NA	23	True	AATAAA	-18	NA	60924459	60937159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60924734_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_30178.nic	chr11	+	3354	11	NIC	ENSG00000006118.15	novel	3480	11	NA	NA	-43	0	intron_retention	TRUE	canonical	2	15	junction_1	89.4555196731873	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	133	False	NA	23	True	AATAAA	-18	NA	60924416	60937159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_60924544_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931685_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_30179.nic	chr11	+	3351	11	NIC	ENSG00000006118.15	novel	3498	11	NA	NA	-43	0	intron_retention	FALSE	canonical	2	15	junction_1	90.0357706692179	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	133	False	NA	23	True	AATAAA	-18	NA	60924416	60937159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_60924544_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_3018.nnic	chr1	-	1081	9	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	-239	0	at_least_one_novel_splicesite	FALSE	canonical	3	973	junction_8	695.152040473881	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	NA	False	NA	-20	True	AATAAA	-23	NA	11691889	11674479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691751
transcript_30201.known	chr11	-	1873	9	FSM	ENSG00000110446.12	ENST00000538739.2	1873	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	36.621160208273	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGGGGCCTGGATGGG	NA	False	NA	22	True	NA	NA	NA	60952653	60937059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60950993_60951367_60952500
transcript_30212.known	chr11	-	2500	8	FSM	ENSG00000110446.12	ENST00000679573.1	2500	8	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	37.3084222039332	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-15	True	NA	-2	True	CATAAA	-27	NA	60952176	60937083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942140_60943688_60943837_60946531_60946822_60950993
transcript_30219.known	chr11	-	1807	7	FSM	ENSG00000110446.12	ENST00000541505.5	1807	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	32.3505109009975	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-3	True	NA	-2	True	CATAAA	-27	NA	60951646	60937083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60942034_60942146_60943688_60943837_60946531_60946822_60950993
transcript_30228.known	chr11	+	2129	4	FSM	ENSG00000110108.10	ENST00000227525.8	2129	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_2	7.78888096369861	531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGCTTCCATGTC	-29	True	NA	45	True	AATAAA	-16	NA	60914157	60923443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60914269_60919685_60919931_60920885_60920989_60921773
transcript_30231.known	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	71.894019222742	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	6474	False	NA	NA	False	NA	NA	NA	61161136	61132443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
transcript_30232.known	chr11	-	2673	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	16.9466073300823	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	17	True	NA	-5	True	AATAAA	-16	NA	61161426	61130256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
transcript_30233.nnic	chr11	-	2745	5	NNC	ENSG00000167987.11	novel	2673	5	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	69.7293876353435	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	-29	True	NA	-5	True	AATAAA	-16	NA	61161680	61130256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161572
transcript_30238.nnic	chr11	-	2838	4	NIC	ENSG00000167987.11	novel	2673	5	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	74.9577658863087	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	-39	True	NA	-5	True	AATAAA	-16	NA	61161690	61130256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61132540_61133254_61133338_61134035_61134208_61161390
transcript_30239.known	chr11	-	915	4	FSM	ENSG00000167987.11	ENST00000536000.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	18.4571575998762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACAGTCCTCGCCTTCA	-10	True	NA	NA	False	NA	NA	NA	61161453	61132756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61133338_61134035_61134208_61138736_61138836_61161390
transcript_30244.known	chr11	-	865	2	FSM	ENSG00000167987.11	ENST00000535818.1	865	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCCTGGGATGTCCCCT	36	True	NA	NA	False	AATAAA	-28	NA	61161615	61138195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61138836_61161390
transcript_30245.known	chr11	+	1384	9	FSM	ENSG00000229183.10	ENST00000378149.9	1384	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	4.18330013267038	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61222346	61231694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61222457_61222942_61223106_61225338_61225457_61226325_61226445_61227119_61227320_61228670_61228788_61229918_61230064_61230165_61230265_61231381
transcript_30251.known	chr11	-	3536	20	FSM	ENSG00000167992.14	ENST00000335613.10	3536	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	10.240866479961	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-3	True	NA	-3	True	ATTAAA	-20	NA	61295316	61258285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_30253.nnic	chr11	-	3514	20	NNC	ENSG00000167992.14	novel	3536	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	12.5092763363767	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-1	True	NA	-3	True	ATTAAA	-20	NA	61295314	61258285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271694_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_30257.nnic	chr11	-	3517	19	NNC	ENSG00000167992.14	novel	3536	20	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	14.9315309758896	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	6808	False	NA	-3	True	ATTAAA	-20	NA	61295446	61258285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271694_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_30261.nnic	chr11	-	3384	18	NIC	ENSG00000167992.14	novel	3536	20	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	12.0672854098438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	6910	False	NA	-3	True	ATTAAA	-20	NA	61295344	61258285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_30294.known	chr11	-	4426	28	FSM	ENSG00000167986.15	ENST00000680367.1	4426	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	396.274783078237	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-6	True	NA	NA	False	AATAAA	-15	NA	61333807	61299454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333525
transcript_30295.known	chr11	-	4348	28	FSM	ENSG00000167986.15	ENST00000681803.1	4348	28	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_27	394.927011367	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-6	True	NA	NA	False	AATAAA	-15	NA	61333807	61299454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333603
transcript_30300.known	chr11	-	4245	27	FSM	ENSG00000167986.15	ENST00000301764.12	4245	27	0	0	0	0	multi-exon	TRUE	canonical	2	1425	junction_2	182.168723404931	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	9	True	NA	NA	False	AATAAA	-19	NA	61333105	61299450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_30302.known	chr11	-	3981	26	FSM	ENSG00000167986.15	ENST00000680075.1	3981	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	403.943354444655	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	47	True	NA	NA	False	AATAAA	-15	NA	61333067	61299454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329957_61330075_61331542_61331692_61332907
transcript_30310.known	chr11	-	4459	26	FSM	ENSG00000167986.15	ENST00000680250.1	4459	26	0	0	0	0	multi-exon	FALSE	canonical	2	1425	junction_2	176.224329761812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAGAAGAAAGGTACAT	4	True	NA	NA	False	AATAAA	-6	NA	61333110	61299463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_30312.known	chr11	-	3937	25	FSM	ENSG00000167986.15	ENST00000680717.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_23	399.903243506059	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-26	True	NA	NA	False	AATAAA	-15	NA	61333140	61299454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61331542_61331692_61332907
transcript_30334.nic	chr11	+	2449	19	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	47.9305052480498	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	-27	True	NA	NA	False	AAAAAG	-4	NA	61333206	61346890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_61333330_61333548_61333651_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_30341.nic	chr11	+	2426	18	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-4	32	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	42.6985085191249	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGCCTCCTCTGAGGG	-18	True	NA	NA	False	AATAAA	-24	NA	61333215	61346922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346294
transcript_30342.known	chr11	+	4678	18	FSM	ENSG00000149476.16	ENST00000394900.8	4678	18	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	19.433321364058	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGCCAGGCAAGCAG	-6	True	NA	NA	False	NA	NA	NA	61333227	61349242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_30384.known	chr11	-	3205	8	FSM	ENSG00000162144.10	ENST00000426130.6	3205	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	63.5783302834594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	-6	True	NA	50	True	AATATA	-17	NA	61362283	61348753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361732
transcript_30389.known	chr11	-	2584	7	FSM	ENSG00000162144.10	ENST00000294072.9	2584	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	35.9664195234017	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-5	True	NA	-1	True	ATTAAA	-17	NA	61361882	61348804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_30395.known	chr11	-	1803	7	FSM	ENSG00000162144.10	ENST00000447532.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9885237068895	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAGTTTCATTAAATAT	364	False	NA	-34	True	NA	NA	NA	61361913	61348837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_30408.known	chr11	-	4138	27	FSM	ENSG00000167986.15	ENST00000681935.1	4138	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	403.765253801655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAGAAGAAAGGTACAT	4	True	NA	NA	False	AATAAA	-6	NA	61333110	61299463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309862_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_30409.known	chr11	-	4180	11	FSM	ENSG00000167986.15	ENST00000681067.1	4180	11	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_8	154.469543923713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCAGCCTGGGCAACAG	-7	True	NA	NA	False	NA	NA	NA	61333121	61314883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542
transcript_30410.known	chr11	-	1557	5	FSM	ENSG00000162144.10	ENST00000540317.5	1557	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.5388660585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGAATCAAAGCTGTCT	364	False	NA	-14	True	ATTAAA	-4	NA	61361913	61348817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61349644_61350990_61351148_61352955_61353140_61353783_61353993_61361732
transcript_30413.known	chr11	+	1475	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	25.8396497654283	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCTTATGTCC	-5	True	NA	NA	False	AATAAA	-33	NA	61362373	61369509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
transcript_30416.known	chr11	+	740	4	FSM	ENSG00000149483.13	ENST00000534963.5	740	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	76.84761255599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGTTCAAGCAATTCTC	105	False	NA	NA	False	NA	NA	NA	61362343	61366557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364316_61364432_61364519_61366044
transcript_30417.known	chr11	+	1134	4	FSM	ENSG00000149483.13	ENST00000692785.1	1932	4	234	564	1	-168	multi-exon	FALSE	canonical	3	173	junction_1	8.83176086632785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCCCACAGCAGCAGT	8	True	NA	NA	False	NA	NA	NA	61362386	61368583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922
transcript_3042.known	chr1	-	1053	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_8	689.030659695198	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-10	True	NA	-20	True	AATAAA	-23	NA	11681148	11674479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_30422.known	chr11	+	2839	3	FSM	ENSG00000149483.13	ENST00000542946.2	3875	3	397	639	0	-195	multi-exon	FALSE	canonical	3	173	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCACCCCTGAGGCTTCT	-18	True	NA	NA	False	NA	NA	NA	61362360	61368556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364519_61366044
transcript_30423.known	chr11	+	611	2	ISM	ENSG00000149483.13	ENST00000534963.5	740	4	17	1755	0	-1755	intron_retention	FALSE	canonical	3	173	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTGCTTAAGCCCAGG	-18	True	NA	NA	False	NA	NA	NA	61362360	61364802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_61362421_61364251
transcript_30428.known	chr11	+	1306	5	FSM	ENSG00000187049.11	ENST00000334888.10	1062	5	-227	-17	-33	-3	multi-exon	FALSE	non_canonical	0	0	junction_4	168.941372967074	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	NA	False	NA	35	True	AATAAA	-34	NA	61392359	61398863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398260
transcript_30430.nic	chr11	+	1259	5	NIC	ENSG00000187049.11	novel	1062	5	NA	NA	28	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	160.760691712869	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	21	True	NA	35	True	AATAAA	-34	NA	61392420	61398863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_61392680_61393230_61393333_61393883_61393977_61397773_61397976_61398260
transcript_30435.nic	chr11	-	3417	11	NIC	ENSG00000149532.16	novel	3650	10	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_5	129.88537254056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	-6	True	AATAAA	-23	NA	61430026	61402648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_30437.nic	chr11	-	3364	11	NIC	ENSG00000149532.16	novel	3650	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	137.93331722249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	False	NA	-19	True	AATAAA	-18	NA	61430026	61402728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_30438.nic	chr11	-	3337	11	NIC	ENSG00000149532.16	novel	3487	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	129.88537254056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	False	NA	-19	True	AATAAA	-18	NA	61430026	61402728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_30444.known	chr11	-	3650	10	FSM	ENSG00000149532.16	ENST00000394888.8	3650	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	87.7217824209649	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	-6	True	AATAAA	-23	NA	61430031	61402648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_30445.known	chr11	-	3487	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	68.9112866814919	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-12	True	NA	-19	True	AATAAA	-18	NA	61429975	61402728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_30459.known	chr11	+	555	5	FSM	ENSG00000167985.7	ENST00000359614.9	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	253.0824964315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACAAAGAGCAGAG	0	True	NA	NA	False	AATGAA	-31	NA	61430124	61446005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438244_61438343_61445940
transcript_3046.nnic	chr1	+	2419	8	NNC	ENSG00000162490.7	novel	7365	7	NA	NA	-171	-5244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.1911153579287	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCTGACTCAGTGGGC	52	False	NA	NA	False	NA	NA	NA	11691538	11720613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_11691854_11704797_11704925_11706248_11706710_11709274_11709466_11711850_11711966_11712339_11712430_11715118_11715209_11719583
transcript_30460.known	chr11	+	559	5	FSM	ENSG00000167985.7	ENST00000537782.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	253.0824964315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGTTGAGCTGTGCT	0	True	NA	NA	False	AAAACA	-45	NA	61430124	61446059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438294_61438343_61445940
transcript_30461.nnic	chr11	+	1354	5	NNC	ENSG00000167985.7	novel	1077	5	NA	NA	-4	26795	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	201.573032670544	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCGTGTATGTGTGTG	-5	True	NA	14	True	AATAAA	-14	NA	61430119	61473528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940_61446114_61472744
transcript_30463.nnic	chr11	+	1302	5	NNC	ENSG00000256591.5	novel	580	5	NA	NA	-5	4813	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	236.021582699549	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCGTGTATGTGTGTGT	-1	True	NA	15	True	AATAAA	-15	NA	61430050	61473529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_61430183_61437624_61437849_61438003_61438114_61468663_61468715_61472744
transcript_30466.known	chr11	+	1077	5	FSM	ENSG00000167985.7	ENST00000542794.5	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	231.050183942796	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTGCCACGAGAGGG	-10	True	NA	104	True	NA	NA	NA	61430041	61446342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003_61438114_61445940
transcript_30469.known	chr11	+	1186	4	FSM	ENSG00000167985.7	ENST00000301761.7	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	47.6188571424762	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATTTCCCAGCCCTC	-1	True	NA	20	True	ATTAAA	-20	NA	61430123	61446733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940
transcript_30470.nnic	chr11	+	1206	4	NNC	ENSG00000256591.5	novel	449	4	NA	NA	-25	4813	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	219.882291743156	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCGTGTATGTGTGTGT	44	False	NA	15	True	AATAAA	-15	NA	61430095	61473529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_61430183_61437624_61437849_61438003_61438114_61472744
transcript_30473.known	chr11	+	659	4	FSM	ENSG00000167985.7	ENST00000536250.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	238.867234160643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAATTTTTTTCTTTCTT	6	True	NA	NA	False	NA	NA	NA	61430130	61438186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003
transcript_30474.known	chr11	+	523	3	FSM	ENSG00000167985.7	ENST00000534878.5	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	51	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGTGCAATGGCATG	-1	True	NA	NA	False	NA	NA	NA	61430123	61438243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61437624_61437849_61438003
transcript_30475.known	chr11	+	835	2	FSM	ENSG00000167985.7	ENST00000542074.1	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAATTATTAAAGCA	-20	True	NA	-16	True	TTTAAA	-19	NA	61430104	61446697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61445940
transcript_30477.known	chr11	-	1749	9	FSM	ENSG00000149532.16	ENST00000448745.5	1749	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	72.7013368171452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCTTTGTCCAAGAAAAC	709	False	NA	NA	False	AAGAAA	-33	NA	61429304	61404418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181
transcript_30478.known	chr11	-	1362	10	FSM	ENSG00000011347.10	ENST00000542836.5	1362	10	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_6	20.2813543269017	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGCCAAGGGAGGCCCA	7555	False	NA	NA	False	NA	NA	NA	61580838	61518626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61547176_61547309_61551383_61551464_61556103_61556208_61580789
transcript_3048.known	chr1	+	7365	7	FSM	ENSG00000162490.7	ENST00000294485.6	7365	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	4.53688586293873	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTGTCTCTCTTTGT	-7	True	NA	21	True	AATAAA	-21	NA	11691709	11725857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11691854_11706248_11706710_11709274_11709466_11711850_11711966_11712339_11712430_11715118_11715209_11719583
transcript_30488.known	chr11	+	5799	20	FSM	ENSG00000134780.10	ENST00000257215.10	5799	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.38297597296654	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGCTGCCTCGAATGTC	-15	True	NA	33	True	TATAAA	-16	NA	61680390	61747001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61680505_61720111_61720251_61720678_61720891_61722858_61722961_61723433_61723573_61725994_61726083_61728152_61728288_61728930_61729009_61731316_61731442_61734848_61735003_61735560_61735645_61735738_61735817_61736269_61736351_61737181_61737325_61737686_61737756_61738134_61738208_61739464_61739662_61740462_61740593_61741161_61741350_61743531
transcript_30500.known	chr11	-	468	4	FSM	ENSG00000134825.16	ENST00000257262.12	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	3593.99446608119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-1	True	NA	-8	True	AATAAA	-16	NA	61792601	61789129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789715_61789922_61790492_61790603_61792555
transcript_30502.known	chr11	-	1692	4	FSM	ENSG00000134825.16	ENST00000543510.1	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3974.26507531756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTCTGGGGCCCATT	9424	False	NA	-9	True	AATAAA	-15	NA	61792802	61789130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61791462
transcript_30503.known	chr11	-	578	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	5669	junction_3	1366.53194457925	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTCTGGGCCTACCCTT	1	True	NA	NA	False	NA	NA	NA	61792599	61788948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
transcript_30504.known	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3252.30342304582	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	6	True	NA	-8	True	AATAAA	-16	NA	61792594	61789129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
transcript_30505.known	chr11	-	517	4	FSM	ENSG00000134825.16	ENST00000541893.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3267.30840635258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	9646	False	NA	-8	True	AATAAA	-16	NA	61792580	61789129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789991_61790422_61790603_61792555
transcript_30507.nic	chr11	+	2181	3	ISM	ENSG00000124920.14	ENST00000278836.10	5940	27	-60	20683	-60	968	5prime_fragment	FALSE	canonical	3	26	junction_2	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGCGGTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	61752575	61767835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_61752791_61765624_61765713_61765957
transcript_30509.known	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	2766.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-16	True	NA	-8	True	AATAAA	-16	NA	61792616	61789129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61790374_61790603_61792555
transcript_30511.known	chr11	+	1392	2	FSM	ENSG00000124920.14	ENST00000537766.1	1392	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGGCAAATGTAGGGG	8	True	NA	NA	False	NA	NA	NA	61752641	61766867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61752791_61765624
transcript_30514.known	chr11	-	553	2	FSM	ENSG00000134825.16	ENST00000540434.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	5669	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGGAGCACCAGAGTC	-2	True	NA	NA	False	NA	NA	NA	61792602	61790096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61790603_61792555
transcript_30539.known	chr11	+	2964	12	FSM	ENSG00000134824.14	ENST00000257261.10	2964	12	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	722.075337751145	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	-11	True	NA	20	True	AATAAA	-20	NA	61816255	61867354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61816427_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_30540.known	chr11	+	1689	12	FSM	ENSG00000134824.14	ENST00000522056.5	1689	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	780.532198180635	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGGCCACCGGGGGTG	27	False	NA	NA	False	NA	NA	NA	61816403	61865957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61816697_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_30562.known	chr11	-	4364	12	FSM	ENSG00000149485.19	ENST00000350997.12	4364	12	0	0	0	0	multi-exon	TRUE	canonical	3	947	junction_4	63.1223395642629	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATTTGTAACCCATG	-7	True	NA	-17	True	AATAAA	-18	NA	61817003	61799626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
transcript_3059.known	chr1	+	1055	7	FSM	ENSG00000177674.16	ENST00000376627.6	1055	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	340.13771720682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCTTCAGGTCCTGCTC	0	True	NA	NA	False	NA	NA	NA	11736152	11750578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11744532_11744569_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748611_11750076
transcript_3060.known	chr1	+	1116	6	FSM	ENSG00000177674.16	ENST00000491346.5	1116	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	382.625352008985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGAGTGTTGCAAGC	-11	True	NA	NA	False	NA	NA	NA	11736141	11750488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11745929_11746224_11747439_11747546_11748414_11748590_11750076
transcript_30612.known	chr11	-	709	5	FSM	ENSG00000149485.19	ENST00000545245.5	709	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	468.869384797088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGGAGGTATCAGTGG	8	True	NA	NA	False	NA	NA	NA	61815132	61810750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61814963
transcript_30617.known	chr11	+	360	3	FSM	ENSG00000134824.14	ENST00000522639.1	360	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATTTCTGAGAAAATAAT	26	False	NA	9	True	ATTAAA	-22	NA	61816402	61826512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61816427_61826031_61826138_61826282
transcript_30619.known	chr11	+	2016	2	FSM	ENSG00000168496.4	ENST00000305885.3	2016	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCATGTTCTTTG	-1	True	NA	25	True	AATAAA	-14	NA	61792910	61797238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61793029_61795340
transcript_30620.known	chr11	+	776	2	FSM	ENSG00000168496.4	ENST00000535723.1	776	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAAGGCTGGCAAAGT	39	False	NA	NA	False	NA	NA	NA	61792950	61795856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61793211_61795340
transcript_30621.known	chr11	-	1844	2	FSM	ENSG00000149485.19	ENST00000541683.1	1844	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATGCTTCCCATTCCTT	559	False	NA	NA	False	NA	NA	NA	61816602	61814338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61816135_61816554
transcript_30622.known	chr11	+	3091	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	0	0	0	0	multi-exon	FALSE	canonical	3	2541	junction_10	125.104386166179	6434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	1	True	NA	20	True	AATAAA	-20	NA	61828299	61867354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_30623.known	chr11	+	1703	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	2609	junction_7	114.114951790825	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACCCTGT	173	False	NA	45	True	AATAAA	-8	NA	61828279	61864221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
transcript_30624.known	chr11	+	5073	7	FSM	ENSG00000134824.14	ENST00000523235.5	5073	7	0	0	0	0	multi-exon	FALSE	canonical	3	2541	junction_5	118.83567085125	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCACTTCCTGTGTTTC	6007	False	NA	13	True	AATAAA	-13	NA	61854186	61867347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_30627.known	chr11	-	1790	12	FSM	ENSG00000221968.9	ENST00000278829.7	1790	12	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_4	50.6217540536781	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	9	True	NA	-11	True	ATTAAA	-16	NA	61891545	61873525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_30629.known	chr11	-	1254	12	FSM	ENSG00000221968.9	ENST00000525588.5	1254	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	128.721943906139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAACACCCAGGCGGGCA	6248	False	NA	NA	False	NA	NA	NA	61891381	61873813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879395_61879510_61880040_61880152_61891168
transcript_30638.nic	chr11	-	2359	11	NIC	ENSG00000221968.9	novel	1790	12	NA	NA	-159	0	intron_retention	FALSE	canonical	3	357	junction_4	39.4081209904761	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	5925	False	NA	-11	True	ATTAAA	-16	NA	61891704	61873525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_3064.known	chr1	+	942	6	FSM	ENSG00000177674.16	ENST00000476512.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	359.758474535347	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGAGCCCCCATGGG	20	False	NA	NA	False	NA	NA	NA	11736116	11750326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11745987_11746224_11747439_11747546_11748414_11748611_11750076
transcript_30644.nic	chr11	-	2838	10	NIC	ENSG00000221968.9	novel	1790	12	NA	NA	-91	0	intron_retention	FALSE	canonical	3	394	junction_4	28.5038442284978	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	5993	False	NA	-11	True	ATTAAA	-16	NA	61891636	61873525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_30659.known	chr11	-	2325	10	FSM	ENSG00000167994.13	ENST00000394836.7	2325	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	6.16441400296898	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-26	True	NA	-5	True	AATAAA	-18	NA	61917566	61897300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61906465_61906685_61907392_61907471_61907564_61907661_61908053_61908307_61917356
transcript_30661.nic	chr11	-	2377	10	NIC	ENSG00000167994.13	novel	2486	11	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	16.7729941672122	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	NA	False	NA	-5	True	AATAAA	-18	NA	61920302	61897300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61906465_61906685_61907392_61907471_61907564_61907661_61908053_61908307_61920040
transcript_30666.known	chr11	-	825	5	FSM	ENSG00000167996.16	ENST00000620041.4	825	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	8394.46107189139	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967454_61967547
transcript_3067.known	chr1	+	809	6	FSM	ENSG00000177674.16	ENST00000452018.6	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	362.449996551248	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTCCCAGGCTGGA	20	True	NA	NA	False	NA	NA	NA	11736172	11750409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748590_11750076
transcript_30670.known	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	216	junction_2	9221.732821017	11853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
transcript_30671.known	chr11	-	786	4	FSM	ENSG00000167996.16	ENST00000526640.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	2	368	junction_3	8743.61581701504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAAATTTGGTACCCA	5147	False	NA	42	True	AAAACA	-37	NA	61967607	61964584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967401
transcript_30672.known	chr11	-	983	4	FSM	ENSG00000167996.16	ENST00000534180.1	983	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	8907.06756832273	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	2	True	NA	-46	True	AATAAA	-15	NA	61967633	61964565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965578_61967311
transcript_30674.known	chr11	-	788	3	FSM	ENSG00000167996.16	ENST00000534719.1	788	3	0	0	0	0	multi-exon	FALSE	canonical	3	18478	junction_1	862	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTGATAATGAAAGCTAA	5168	False	NA	-120	True	NA	NA	NA	61967586	61964746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61965113_61965368_61965516_61967311
transcript_30676.known	chr11	-	885	3	FSM	ENSG00000167996.16	ENST00000533138.1	885	3	0	0	0	0	multi-exon	FALSE	canonical	3	19325	junction_1	438.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGGTGACCACGTGAC	5141	False	NA	NA	False	NA	NA	NA	61967613	61964837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965516_61967311
transcript_3068.known	chr1	+	786	6	FSM	ENSG00000177674.16	ENST00000400895.6	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	344.490928763008	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACCAAGAGGCCAGGAG	-29	True	NA	NA	False	NA	NA	NA	11736123	11750316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748611_11750076
transcript_30681.known	chr11	+	1697	1	FSM	ENSG00000279491.1	ENST00000623785.1	1697	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	17	False	NA	NA	False	AAAACA	-13	NA	61967793	61969490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61967800_61969500
transcript_30682.known	chr11	+	4114	19	FSM	ENSG00000149503.13	ENST00000394818.8	4114	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.38630351054606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAAATAGTGAACACAA	-17	True	NA	NA	False	AATAAA	-28	NA	62124010	62153169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62141499_62141512_62144981_62145092_62145168_62145290_62145628_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
transcript_30683.known	chr11	+	3698	18	FSM	ENSG00000149503.13	ENST00000278849.4	3698	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	2.40242092431319	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCCCTTGAGACCACCT	-30	True	NA	NA	False	NA	NA	NA	62123997	62152752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62144981_62145092_62145168_62145290_62145628_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
transcript_30697.known	chr11	+	2182	7	FSM	ENSG00000162174.12	ENST00000301776.9	2182	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	77.2299956119526	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	-12	True	NA	NA	False	AATAAA	-11	NA	62337452	62393406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_30699.known	chr11	+	2270	7	FSM	ENSG00000162174.12	ENST00000415229.6	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	103.884016522701	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTGTGGTTGGGAGTC	-17	True	NA	NA	False	AATAAA	-17	NA	62337447	62393412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_30704.known	chr11	+	1161	6	FSM	ENSG00000162174.12	ENST00000628829.2	1161	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	72.5109646881077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	28	True	NA	NA	False	NA	NA	NA	62337492	62392568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_3071.known	chr1	+	1100	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	285.335767123577	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	-6	True	NA	15	True	ATTAAA	-20	NA	11736146	11750771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
transcript_30711.nic	chr11	+	2165	5	NIC	ENSG00000162174.12	novel	2270	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	162.833312009552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGACTCAAGAAAGCTT	-25	True	NA	NA	False	AATAAA	-21	NA	62337439	62383247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62381796
transcript_30713.known	chr11	+	639	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	62.0017920887955	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	30	True	NA	15	True	ATTAAA	-16	NA	62337494	62357201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
transcript_30714.known	chr11	+	1177	4	FSM	ENSG00000162174.12	ENST00000534183.5	1177	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	85.9418407994616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCTCATGAACCCCCAC	-14	True	NA	NA	False	GGGGCT	-42	NA	62337450	62389826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132
transcript_30715.nic	chr11	+	771	4	ISM	ENSG00000162174.12	ENST00000415229.6	2270	7	-8	36211	-8	0	5prime_fragment	FALSE	canonical	3	75	junction_1	136.948489910948	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	-25	True	NA	15	True	ATTAAA	-16	NA	62337439	62357201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986
transcript_3072.known	chr1	+	1130	5	FSM	ENSG00000177674.16	ENST00000314340.10	1130	5	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_4	104.505980690102	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTGTGTTTTGAACC	-17	True	NA	13	True	ATTAAA	-18	NA	11736135	11750769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748611_11750076
transcript_30720.known	chr11	-	1024	6	FSM	ENSG00000124942.14	ENST00000257247.11	1024	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	2.68328157299975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTGTGTCAACCTT	8	True	NA	-5	True	AATAAA	-14	NA	62546796	62433545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62433892_62491731_62491832_62535002_62535191_62535944_62536099_62536468_62536568_62546659
transcript_30722.known	chr11	-	18761	5	FSM	ENSG00000124942.14	ENST00000378024.9	18761	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.76085931090146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGCCTTTGCATTC	-2	True	NA	-1	True	AATAAA	-19	NA	62546806	62515901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62534075_62535002_62535191_62535944_62536099_62536468_62536568_62546659
transcript_30727.known	chr11	-	5064	17	FSM	ENSG00000255508.7	ENST00000496634.2	5064	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	5213.09309537953	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTTTCCTGTCCTGCCT	9724	False	62591545	-11	True	ATTAAA	-16	NA	62591531	62559602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62574909_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_30732.known	chr11	-	1446	10	FSM	ENSG00000254772.10	ENST00000329251.5	1446	10	0	0	0	0	multi-exon	FALSE	canonical	3	6330	junction_9	1461.30642547544	3291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	-3	True	NA	-4	True	ATTAAA	-23	NA	62573891	62559595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830
transcript_30747.known	chr11	-	2705	9	FSM	ENSG00000149016.16	ENST00000476907.6	2705	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	46.3087464740733	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCTCCCGTTTCCTTT	-7	True	NA	NA	False	AATAAA	-17	NA	62591523	62575051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_30760.nnic	chr11	-	3377	19	Fusion	ENSG00000149480.7_ENSG00000149499.12	novel	3083	18	NA	NA	-520	0	multi-exon	TRUE	non_canonical	0	0	junction_1	37.8270919961988	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTGGCTCAGCTGT	9310	False	NA	-14	True	AATAAA	-16	NA	62602385	62593213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_-_62593325_62593550_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601422
transcript_30761.nnic	chr11	-	3320	19	Fusion	ENSG00000149480.7_ENSG00000149499.12	novel	3083	18	NA	NA	-520	-56	multi-exon	FALSE	non_canonical	0	0	junction_1	37.8270919961988	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCGGATTCTGTAATT	9310	False	NA	-71	True	AATAAA	-20	NA	62602385	62593270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_-_62593325_62593550_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601422
transcript_30763.known	chr11	-	2265	18	FSM	ENSG00000149480.7	ENST00000527204.5	2265	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	36.9192516428558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGGATGCCCAGGGC	-20	True	NA	NA	False	NA	NA	NA	62601275	62593841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601022
transcript_30764.known	chr11	-	3083	18	FSM	ENSG00000149480.7	ENST00000278823.7	3083	18	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	15.3451636825062	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTGGCTCAGCTGT	-16	True	NA	-14	True	AATAAA	-16	NA	62601865	62593213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601422
transcript_30780.known	chr11	-	2909	22	FSM	ENSG00000149499.12	ENST00000529309.5	2909	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	30.1834151273979	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCCGGTGCTTTTGTGG	6	True	NA	-4	True	AATAAA	-15	NA	62612530	62602219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62602679_62602758_62602780_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
transcript_30784.known	chr11	-	3266	22	FSM	ENSG00000149499.12	ENST00000394773.7	3266	22	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_20	23.2648167987687	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	-15	True	NA	-2	True	AATAAA	-17	NA	62612775	62602217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
transcript_30785.known	chr11	-	3017	22	FSM	ENSG00000149499.12	ENST00000278845.8	3017	22	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	27.0553308925471	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCGGTGCTTTTGTGGG	12	True	NA	-3	True	AATAAA	-16	NA	62612524	62602218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611348_62611424_62611597_62612435
transcript_3079.known	chr1	+	1067	4	FSM	ENSG00000177674.16	ENST00000376637.7	1067	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	371.58130559363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAACCTCCAGCCTCC	9	False	NA	-46	True	NA	NA	NA	11736083	11750710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11747439_11747546_11748414_11748590_11750076
transcript_30796.nic	chr11	-	3735	21	NIC	ENSG00000149499.12	novel	2909	22	NA	NA	-212	0	intron_retention	FALSE	canonical	3	72	junction_19	22.2180107120327	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCCGGTGCTTTTGTGG	9170	False	NA	-4	True	AATAAA	-15	NA	62612987	62602219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_62602679_62602758_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
transcript_30809.known	chr11	+	1358	3	FSM	ENSG00000149489.9	ENST00000278833.4	1358	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	0	True	NA	9	True	AATAAA	-15	NA	62613256	62615116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62613872_62614257_62614505_62614620
transcript_30815.known	chr11	-	1452	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	46.1112784468182	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	-1	True	NA	-27	True	AATAAA	-16	NA	62621986	62615295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_30820.known	chr11	-	1120	5	FSM	ENSG00000149541.10	ENST00000534026.5	1120	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	74.2849244463505	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGGTGTTAGCCAGGA	1	True	NA	NA	False	NA	NA	NA	62621984	62616066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62616241_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_30834.nnic	chr11	-	3799	25	NNC	ENSG00000089597.18	novel	3835	24	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	332.318110233085	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	6623	False	NA	77	True	AATAAA	-16	NA	62646677	62624828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62625406_62625505_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_30838.known	chr11	-	3906	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	354.82160766206	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTAGTCTGGATTCT	-6	True	NA	80	True	AATAAA	-19	NA	62646615	62624825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_30839.known	chr11	-	3846	25	FSM	ENSG00000089597.18	ENST00000648273.1	3846	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	383.331773094651	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGGGGGAGGACTAATG	3	True	NA	-45	True	NA	NA	NA	62646606	62624950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62639929_62640070_62646561
transcript_30852.known	chr11	-	3835	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	265.873457968587	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	-4	True	NA	77	True	AATAAA	-16	NA	62646613	62624828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_30863.known	chr11	-	3836	23	FSM	ENSG00000089597.18	ENST00000540933.5	3836	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	343.89670573426	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTGGTGGTAGTCTG	6574	False	NA	74	True	AATAAA	-13	NA	62646726	62624831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639626_62639732_62646561
transcript_3090.known	chr1	+	5589	23	FSM	ENSG00000011021.23	ENST00000346436.11	5589	23	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_17	23.9493698048526	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCCTTTAGCCTTT	-6	True	NA	6	True	AATAAA	-15	NA	11806190	11843130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826215_11827088_11827222_11828105_11828220_11828457_11828625_11829195_11829323_11833514_11833639_11833876_11834031_11834235_11834396_11834483_11834591_11835966_11836154_11836998_11837157_11837342_11837500_11838334_11838443_11838534_11838661_11840142
transcript_30905.known	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	1	1	junction_6	1179.99681025934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-2	True	NA	-1	True	AATAAA	-16	NA	62671769	62662816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
transcript_30907.known	chr11	-	577	4	FSM	ENSG00000255432.1	ENST00000528405.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1109.20001202068	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATCCGGGCCA	25	True	NA	NA	False	NA	NA	NA	62665178	62649693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62650000_62663235_62663334_62664848_62664974_62665130
transcript_30909.known	chr11	-	646	4	FSM	ENSG00000278615.5	ENST00000524958.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2187	junction_3	157.319914682012	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-7	True	NA	-1	True	AATAAA	-16	NA	62665210	62662816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62665130
transcript_30911.known	chr11	+	1368	3	FSM	ENSG00000214756.8	ENST00000398922.6	1368	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGGCCTAACCT	-5	True	NA	NA	False	NA	NA	NA	62665308	62667397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665333_62665646_62665947_62666353
transcript_30912.known	chr11	+	2034	3	FSM	ENSG00000214756.8	ENST00000532971.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	116.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCAGCCTCAATTTTCT	-2	True	NA	19	True	TATAAA	-33	NA	62665311	62668108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665333_62665646_62665947_62666395
transcript_30914.known	chr11	-	405	3	FSM	ENSG00000278615.5	ENST00000525675.1	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	2187	junction_2	158	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGCAAAAGAAGACAAAA	12	True	NA	NA	False	NA	NA	NA	62665191	62663114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663334_62664848_62664974_62665130
transcript_30915.known	chr11	+	2870	2	FSM	ENSG00000214756.8	ENST00000529868.1	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTAGCTTCTGTAAC	-1	True	NA	NA	False	NA	NA	NA	62665312	62668496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665333_62665646
transcript_30921.known	chr11	+	1927	2	FSM	ENSG00000204922.5	ENST00000377953.4	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	0	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAATTTCTGTGTTGTT	-5	True	NA	NA	False	AATAAA	-20	NA	62671672	62673686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62671866_62671952
transcript_30922.known	chr11	-	3285	2	FSM	ENSG00000185085.2	ENST00000330574.2	3285	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTGCTTCTGTCATGC	-2	True	NA	-1	True	AATAAA	-23	NA	62653302	62646847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62650000_62653169
transcript_30923.known	chr11	+	376	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	22	False	NA	12	True	AATAAA	-17	NA	62665335	62665711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665300_62665700
transcript_30924.known	chr11	-	2915	5	FSM	ENSG00000162194.13	ENST00000431002.6	2915	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	1246.55505293589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGTGTGATTAAATGT	2	True	NA	-2	True	AATAAA	-15	NA	62671765	62662817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640
transcript_30925.known	chr11	-	774	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_2	16.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	22	True	NA	-1	True	AATAAA	-16	NA	62665181	62662816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848
transcript_30927.known	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_9	299.570227138236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-4	True	NA	-116	True	NA	NA	NA	62679081	62676612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
transcript_30929.known	chr11	-	1134	9	FSM	ENSG00000162191.14	ENST00000301935.10	1134	9	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_5	75.7392731678883	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGACTCCTTCCTGA	4	True	NA	-3	True	AATAAA	-19	NA	62679073	62676499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_30931.known	chr11	-	1291	8	FSM	ENSG00000162191.14	ENST00000294119.6	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	80.8520947439817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	22	True	NA	-1	True	AATAAA	-21	NA	62679055	62676497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_30933.known	chr11	-	1257	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	79.6697264092356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGAGTTCTGTACAT	10	True	NA	-20	True	AATAAA	-2	NA	62679067	62676516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_30939.known	chr11	-	739	5	FSM	ENSG00000162191.14	ENST00000533908.5	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	104.886545848359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGCAGAGAGAGCCAA	19	True	NA	NA	False	NA	NA	NA	62679058	62677804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_30940.known	chr11	-	2073	5	FSM	ENSG00000162191.14	ENST00000532904.5	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_2	104.755369790765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	19	True	NA	-1	True	AATAAA	-21	NA	62679058	62676497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_30941.known	chr11	-	4001	24	FSM	ENSG00000234857.2	ENST00000403734.2	4001	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	185.276985717798	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	248	False	NA	-37	True	AATAAA	-19	NA	62727384	62690274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
transcript_30943.known	chr11	-	5214	14	FSM	ENSG00000214753.4	ENST00000301785.7	5214	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.6231855394659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTCCTGTGGCTGCA	-6	True	NA	-5	True	AATAAA	-22	NA	62727457	62712629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62715380_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
transcript_30946.known	chr11	-	2001	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	134.087056955454	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-13	True	NA	-37	True	AATAAA	-19	NA	62709537	62690274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
transcript_30947.known	chr11	-	1693	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	120.164262574195	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	34	True	NA	-57	True	NA	NA	NA	62706234	62690294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
transcript_30949.known	chr11	-	1516	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_10	67.7389105315401	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	8787	False	NA	-57	True	NA	NA	NA	62706344	62690294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_30950.known	chr11	-	1440	11	FSM	ENSG00000168000.16	ENST00000421906.5	1440	11	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_10	123.091226332343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTTTTTCCTTCAATA	8787	False	NA	-77	True	NA	NA	NA	62706344	62690314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706258
transcript_30951.known	chr11	-	1793	11	FSM	ENSG00000168000.16	ENST00000682223.1	1793	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	140.848890659458	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGCACTTTCCCACCT	-1	True	NA	-107	True	AAGAAA	-18	NA	62707587	62690344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690621_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_30956.known	chr11	-	1882	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	140.411680425811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-1	True	NA	-37	True	AATAAA	-19	NA	62707587	62690274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_30960.known	chr11	-	1364	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	133.383416519705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-3	True	NA	-38	True	AATAAA	-18	NA	62706315	62690275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_30973.nic	chr11	-	1903	8	ISM	ENSG00000214753.4	ENST00000301785.7	5214	14	-175	9245	-175	989	5prime_fragment	FALSE	canonical	3	34	junction_2	9.64682458064808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTGAGAAAAGATACAATG	0	True	NA	NA	False	AAGAAA	-2	NA	62727632	62721874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
transcript_30974.known	chr11	+	864	3	FSM	ENSG00000162188.6	ENST00000294117.6	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCTCCTGTGTTAGAA	-20	True	NA	4	True	AATAAA	-17	NA	62707675	62709201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62707916_62708294_62708395_62708677
transcript_3098.known	chr1	-	7018	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_11	6.36882905023163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	-4	True	NA	NA	False	AATAAA	-22	NA	11805964	11785722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
transcript_30982.known	chr11	+	858	4	FSM	ENSG00000162222.14	ENST00000532583.1	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	55.5837706129726	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGCTTGAGAAATATA	111	False	NA	9	True	AATACA	-16	NA	62728641	62738603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287
transcript_30984.nic	chr11	+	916	4	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	62.579726926715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	3717	False	NA	14	True	AATATA	-14	NA	62728107	62738636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287
transcript_30986.nnic	chr11	+	2341	4	NNC	ENSG00000162222.14	novel	858	4	NA	NA	62	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	75.6762108518185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAAAGCATTTAAG	-6	True	NA	NA	False	ATTAAA	-14	NA	62728173	62740279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_62729087_62735381_62735565_62738287_62739146_62739892
transcript_30989.known	chr11	+	606	3	FSM	ENSG00000162222.14	ENST00000530625.5	606	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	60.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAAGAAGGGCTTTGA	3678	False	NA	NA	False	NA	NA	NA	62728068	62735564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62728228_62728822_62729087_62735381
transcript_30990.known	chr11	+	1133	3	FSM	ENSG00000162222.14	ENST00000316461.9	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	-5	True	NA	14	True	AATATA	-14	NA	62728485	62738636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62729087_62735381_62735565_62738287
transcript_31.known	ERCC-00084	+	978	1	FSM	ERCC-00084A	DQ883682	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00084_+_0_1000
transcript_31006.nnic	chr11	-	2379	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3965	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	NA	False	NA	-4	True	AATAAA	-21	NA	62758149	62748318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62748635_62751916_62753716_62757885
transcript_31013.nnic	chr11	-	3276	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3942	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	2.5	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	NA	False	NA	-5	True	CATAAA	-27	NA	62758126	62750962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62754237_62754520_62757885
transcript_31015.nnic	chr11	-	3213	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-4036	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	6.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	NA	False	NA	-5	True	CATAAA	-27	NA	62758220	62750962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62754394_62754520_62757885
transcript_31017.nnic	chr11	-	3017	2	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3965	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	NA	False	NA	-5	True	CATAAA	-27	NA	62758149	62750962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62757885
transcript_31018.known	chr11	-	2972	2	FSM	ENSG00000185670.9	ENST00000673933.1	2972	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTTGGCTGGTTTC	3916	False	NA	-7	True	CATAAA	-25	NA	62754184	62750964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62753716_62753963
transcript_31020.known	chr11	+	919	8	FSM	ENSG00000168002.12	ENST00000525455.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	543.038992097967	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTGTTCTAAGTATAA	-5	True	NA	-17	True	NA	NA	NA	62761579	62766673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761661_62761794_62761905_62762541_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_31021.nic	chr11	+	1230	8	NIC	ENSG00000168002.12	novel	919	8	NA	NA	-102	0	intron_retention	FALSE	canonical	3	74	junction_2	429.358230148111	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAAGTGTTATCTTCT	7523	False	NA	17	True	TATAAA	-14	NA	62761462	62766707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62761661_62761794_62761905_62762541_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_31024.known	chr11	+	791	8	FSM	ENSG00000168002.12	ENST00000301788.12	791	8	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_3	45.0641266441954	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	-5	True	NA	20	True	TATAAA	-17	NA	62761579	62766710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761661_62761794_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_31027.known	chr11	+	1053	8	FSM	ENSG00000168002.12	ENST00000524819.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	454.091512848254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGGTTCTCATGGAA	-2	True	NA	5	True	TATAAA	-2	NA	62761582	62766695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761661_62761794_62762185_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_31031.known	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	433.803623006232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	9	False	NA	20	True	TATAAA	-17	NA	62761616	62766710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_31039.known	chr11	+	868	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_2	43.2335389355173	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	29	False	NA	20	True	TATAAA	-17	NA	62761636	62766710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_31050.known	chr11	+	2023	11	FSM	ENSG00000162227.8	ENST00000294168.8	2023	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	21.1556139121511	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	0	True	NA	33	True	AATAAA	-16	NA	62771395	62787342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778868_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
transcript_31053.nnic	chr11	+	2028	11	NNC	ENSG00000162227.8	novel	2023	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	59.7414429018918	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	9756	False	NA	33	True	AATAAA	-16	NA	62771363	62787342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778895_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
transcript_3107.known	chr1	-	7044	12	FSM	ENSG00000177000.13	ENST00000376583.7	7044	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	10.3684199486424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGCTACTGTCCTC	2752	False	NA	NA	False	AATAAA	-15	NA	11803514	11785729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11803404
transcript_31077.nic	chr11	+	2598	10	NIC	ENSG00000162227.8	novel	2023	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	176	junction_7	16.9625586236785	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	9746	False	NA	33	True	AATAAA	-16	NA	62771353	62787342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
transcript_31083.nic	chr11	+	2957	9	NIC	ENSG00000162227.8	novel	2023	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	179	junction_6	13.801607696207	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	9746	False	NA	33	True	AATAAA	-16	NA	62771353	62787342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778964_62781893_62781969_62782112_62782826_62786259_62786389_62786516
transcript_31093.known	chr11	+	1043	5	FSM	ENSG00000185475.11	ENST00000333449.9	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	12.2754836971909	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTGTTACTCCATTC	-8	True	NA	9	True	AATGAA	-20	NA	62787401	62790400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789600_62789680_62789885
transcript_31102.known	chr11	+	797	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	183.637928786209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	5	True	NA	25	True	NA	NA	NA	62787414	62790246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
transcript_31105.known	chr11	-	563	4	FSM	ENSG00000168569.8	ENST00000527073.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTCAGGGGTCACTGA	7557	False	NA	NA	False	NA	NA	NA	62791743	62771628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62772000_62772076_62772133_62774594_62774666_62791678
transcript_31106.known	chr11	-	857	3	FSM	ENSG00000168569.8	ENST00000528367.1	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCAGATCGGGGAGGGG	10	True	NA	NA	False	NA	NA	NA	62791992	62771660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62772133_62774594_62774666_62791678
transcript_31107.known	chr11	-	1273	2	FSM	ENSG00000168569.8	ENST00000307366.8	1273	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGGGTGGCTTCAGAC	-4	True	NA	NA	False	NA	NA	NA	62792006	62789970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62790916_62791678
transcript_31109.nic	chr11	-	2279	21	NIC	ENSG00000162231.14	novel	2290	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	34.7456472093988	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	413	False	NA	-10	True	TATAAA	-14	NA	62805471	62792129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_31110.known	chr11	-	2290	21	FSM	ENSG00000162231.14	ENST00000294172.7	2290	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_16	19.1140655016142	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-2	True	NA	-10	True	TATAAA	-14	NA	62805440	62792129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_31114.known	chr11	-	4128	20	FSM	ENSG00000162231.14	ENST00000531709.6	4128	20	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_15	19.0966342700281	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTGGATTGGTT	414	False	NA	-3	True	TATAAA	-21	NA	62805470	62792122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_31125.known	chr11	-	1785	11	FSM	ENSG00000162236.13	ENST00000377897.8	1785	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.2796917140732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCATGTCATCATTTCT	17	True	NA	-2	True	NA	NA	NA	62832041	62806896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62807667_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_31127.known	chr11	-	1568	11	FSM	ENSG00000162236.13	ENST00000394690.5	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	60.1552159002027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTACAGCAAGACTGT	16	True	NA	-30	True	NA	NA	NA	62832042	62806924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831111_62831953
transcript_31130.known	chr11	-	1719	11	FSM	ENSG00000162236.13	ENST00000491231.5	1719	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.3663370737772	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGTTTTCTCCCAATTA	16	True	NA	-42	True	NA	NA	NA	62832042	62806936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825024_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_31141.known	chr11	-	1366	12	FSM	ENSG00000133316.16	ENST00000529106.5	1366	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	157.371172552069	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCCTGAGCCTTTT	1653	False	NA	-7	True	AATAAA	-14	NA	62840156	62832911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839660_62840077
transcript_31147.known	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	162.955420700885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	5	True	NA	-6	True	AATAAA	-15	NA	62839581	62832910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_31148.known	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_6	26.1543495426669	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-4	True	NA	-6	True	AATAAA	-15	NA	62839590	62832910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_31149.known	chr11	-	1117	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	9	0	0	multi-exon	FALSE	canonical	3	84	junction_10	39.8096721915667	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	-6	True	NA	-22	True	AATAAA	-17	NA	62855886	62851986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_3115.nic	chr1	+	1222	6	ISM	ENSG00000011021.23	ENST00000376490.7	963	11	-72	4720	0	2719	5prime_fragment	FALSE	canonical	3	122	junction_5	15.8795465930234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAAGTCCTCCCATTGCC	-6	True	NA	NA	False	AAAAAG	-9	NA	11806190	11823498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694
transcript_31154.known	chr11	-	1513	10	FSM	ENSG00000255717.8	ENST00000658540.1	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	26.1958436058513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-5	True	NA	-23	True	AATAAA	-16	NA	62855885	62851987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_31155.known	chr11	-	1202	9	FSM	ENSG00000255717.8	ENST00000663967.1	1202	9	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_8	23.4677305038216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	513	False	NA	-23	True	AATAAA	-16	NA	62855367	62851987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132
transcript_31156.known	chr11	-	1394	11	FSM	ENSG00000255717.8	ENST00000540725.6	1394	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	60.9925405275104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-5	True	NA	-23	True	AATAAA	-16	NA	62855885	62851987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855746_62855864
transcript_31164.known	chr11	+	2334	13	FSM	ENSG00000168003.18	ENST00000538084.2	2334	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	1228.18437303471	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	1	True	NA	51	True	AATAAA	-41	NA	62856108	62888880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31168.known	chr11	+	2222	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	999.829712773858	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	3	True	NA	31	True	AATAAA	-21	NA	62856110	62888860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31171.nic	chr11	+	2363	12	NIC	ENSG00000168003.18	novel	2222	12	NA	NA	-37	0	intron_retention	FALSE	canonical	3	124	junction_2	1014.87149371747	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	NA	False	NA	31	True	AATAAA	-21	NA	62855966	62888860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62856382_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31179.known	chr11	+	2197	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1089.74353643718	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	3	True	NA	51	True	AATAAA	-41	NA	62856110	62888880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31180.known	chr11	+	2161	12	FSM	ENSG00000168003.18	ENST00000377890.6	2161	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	1099.56416610032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAGTGAACCCCCAA	-6	True	NA	16	True	TTTAAA	-23	NA	62856101	62888793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31186.known	chr11	+	2084	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	712.865548332924	2436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	9	True	NA	46	True	AATAAA	-36	NA	62856167	62888875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31195.known	chr11	+	2227	11	FSM	ENSG00000168003.18	ENST00000681467.1	2227	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	947.131801810075	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-6	True	NA	51	True	AATAAA	-41	NA	62856101	62888880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856454_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_312.known	chr1	-	2757	19	FSM	ENSG00000188976.11	ENST00000327044.7	2757	19	0	0	0	0	multi-exon	TRUE	canonical	3	992	junction_1	193.018493644751	3534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	3	True	NA	-14	True	AATAAA	-29	NA	959256	944202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_944801_945056_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_31205.known	chr11	+	1993	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	815.77693029406	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	36	False	NA	24	True	AATAAA	-14	NA	62856143	62888853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31207.known	chr11	+	2029	10	FSM	ENSG00000168003.18	ENST00000541425.6	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	1124.12988573385	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-2	True	NA	51	True	AATAAA	-41	NA	62880895	62888880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62883988_62884113_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31227.known	chr11	+	1908	9	FSM	ENSG00000168003.18	ENST00000681107.1	1908	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	874.568313155125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGTGAAGTCTTCCCT	-2	True	NA	20	True	AATAAA	-10	NA	62880895	62888849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888100_62888219_62888330
transcript_31228.known	chr11	+	1905	9	FSM	ENSG00000168003.18	ENST00000681657.1	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_2	263.230768528301	3099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-2	True	NA	51	True	AATAAA	-41	NA	62880895	62888880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31233.known	chr11	+	1926	9	FSM	ENSG00000168003.18	ENST00000541649.2	1926	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1218.02349500123	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-25	True	NA	51	True	AATAAA	-41	NA	62881697	62888880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881719_62881892_62882619_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31234.known	chr11	+	1413	9	FSM	ENSG00000168003.18	ENST00000536981.6	1413	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	934.087121204441	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-24	True	NA	51	True	AATAAA	-41	NA	62881698	62888880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881759_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31239.known	chr11	+	1975	8	FSM	ENSG00000168003.18	ENST00000680297.1	1975	8	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_2	270.120305774736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAAATAGGGTGTTTT	6855	False	NA	-24	True	TTTAAA	-35	NA	62880862	62888805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134
transcript_3124.known	chr1	-	549	3	FSM	ENSG00000177000.13	ENST00000642002.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCAGACAAGGAGACCTC	163	False	NA	NA	False	NA	NA	NA	11806103	11801332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11801417_11802880_11803130_11805887
transcript_3126.known	chr1	-	708	3	FSM	ENSG00000120937.9	ENST00000376468.4	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	8	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAAACTGATTTGTC	-1	True	NA	-13	True	AATAAA	-20	NA	11858945	11857463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11857672_11858213_11858470_11858701
transcript_31262.known	chr11	+	1512	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_1	265.368438521361	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	-24	True	NA	16	True	AATAAA	-6	NA	62881698	62888845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_31263.known	chr11	+	749	3	FSM	ENSG00000257002.1	ENST00000543624.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	NA	False	NA	16	True	AATAAA	-16	NA	62909545	62918361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62909616_62910602_62910846_62917925
transcript_31266.known	chr11	-	3042	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	15.6792856980157	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-3	True	NA	-2	True	ATTAAA	-16	NA	63491167	63461403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
transcript_31267.known	chr11	-	1166	6	FSM	ENSG00000168004.10	ENST00000301790.4	1166	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	23.0182536261985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGACCCACAGACTCTC	585	False	63491216	NA	False	AATATA	-6	NA	63491194	63463336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490364_63490886
transcript_31273.known	chr11	-	571	4	FSM	ENSG00000168004.10	ENST00000394615.2	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.5058680596133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTACTGACACAAGCAAA	-11	True	NA	NA	False	NA	NA	NA	63490965	63463475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63490886
transcript_31274.known	chr11	-	2599	4	FSM	ENSG00000168004.10	ENST00000536887.5	2599	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	32.7448045073142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	15	True	NA	-2	True	ATTAAA	-16	NA	63490939	63461403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63463596_63466109_63466373_63490242_63490334_63490886
transcript_31281.known	chr11	+	1425	9	FSM	ENSG00000133317.16	ENST00000340246.10	1425	9	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	6.06088896120033	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTCTCATCTAGCAA	18	False	NA	10	True	AATAAA	-20	NA	63506362	63516774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63506528_63508552_63508642_63508774_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
transcript_31287.nnic	chr11	+	880	5	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7331	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	17.4928556845359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTACCATGTTTTTA	8541	False	NA	9	True	AATAAA	-23	NA	63529476	63546462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_63529602_63536814_63536878_63539515_63539625_63544620_63544890_63546148
transcript_31288.nnic	chr11	+	817	4	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7331	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	8.83176086632785	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTACCATGTTTTTA	8541	False	NA	9	True	AATAAA	-23	NA	63529476	63546462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_63529602_63539515_63539625_63544620_63544890_63546148
transcript_31290.known	chr11	+	758	4	FSM	ENSG00000133321.11	ENST00000255688.8	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	13.8884444373331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	-3	True	NA	5	True	AATAAA	-19	NA	63536807	63546458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63536878_63539515_63539625_63544620_63544890_63546148
transcript_31294.known	chr11	-	1075	5	FSM	ENSG00000176485.13	ENST00000415826.3	1075	5	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	335.109310524193	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCGGCTATAAGGAAATT	2	True	NA	NA	False	AAAAAG	-1	NA	63614433	63574461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
transcript_31296.known	chr11	-	678	4	FSM	ENSG00000176485.13	ENST00000394613.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	554.885173306654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATAAGGCTTATTTT	385	False	NA	1	True	NA	NA	NA	63614158	63574849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598114_63613999
transcript_31297.known	chr11	-	2594	4	FSM	ENSG00000176485.13	ENST00000323646.9	2594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_3	71.2569684701472	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGATACATTCAAAATATAA	1	True	NA	NA	False	ATTAAA	-29	NA	63614369	63573194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999
transcript_31300.known	chr11	-	6899	13	FSM	ENSG00000184743.13	ENST00000398868.8	6899	13	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_7	10.8384603252594	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCTGTGTTTTCTTTC	35	True	NA	-11	True	AATAAA	-14	NA	63671376	63624086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
transcript_31303.known	chr11	+	2645	8	FSM	ENSG00000133318.14	ENST00000356000.7	2645	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1057.73213305927	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	-1	True	NA	44	True	AATAAA	-21	NA	63681449	63759891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63704850_63704908_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_31308.known	chr11	+	2532	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	0	0	0	0	multi-exon	FALSE	canonical	3	2108	junction_6	115.511062481286	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	-1	True	NA	38	True	AATAAA	-15	NA	63681499	63759885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_31314.known	chr11	+	2524	6	FSM	ENSG00000133318.14	ENST00000341307.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	927.957197288754	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	-5	True	NA	35	True	AATAAA	-12	NA	63681445	63759882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63758155
transcript_31318.known	chr11	+	1407	4	FSM	ENSG00000133318.14	ENST00000354497.4	1407	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1048.44784748164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAAAAATAACCTGCA	72	False	NA	-24	True	AATAAA	-36	NA	63681572	63759089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63749990_63750199_63756111_63756171_63758155
transcript_31322.known	chr11	-	5716	5	FSM	ENSG00000188070.9	ENST00000433688.2	5716	5	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_4	4.55521678957215	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTGTTTTTTTTTTT	7	True	NA	-2	True	AATAAA	-25	NA	63768775	63759891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63763870_63764037_63764599_63764867_63765255_63765806_63766305_63768483
transcript_31326.known	chr11	+	1954	6	FSM	ENSG00000168005.9	ENST00000294244.9	1954	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	7.19444229944198	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCGTCTGGGCCATCA	1	True	NA	27	True	AATAAA	-18	NA	63813455	63827716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63813814_63817804_63818135_63818215_63818366_63818526_63818653_63818801_63819003_63826927
transcript_31328.nnic	chr11	+	1783	5	NIC	ENSG00000168005.9	novel	1954	6	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	30.0780235387899	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCGTCTGGGCCATCA	15	True	NA	27	True	AATAAA	-18	NA	63813500	63827716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_63813814_63817804_63818135_63818215_63818366_63818801_63819003_63826927
transcript_31337.known	chr11	+	4547	19	FSM	ENSG00000072518.22	ENST00000402010.8	4547	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	70.3300859352121	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCCTCCTGTTTCTT	-9	True	NA	11	True	AATAAA	-20	NA	63839109	63911020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902600_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63906087_63906115_63908259_63908305_63908876
transcript_31349.nic	chr11	+	3311	18	NIC	ENSG00000072518.22	novel	4547	19	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	65.8582413861584	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAAATCC	NA	False	NA	NA	False	AAAAAG	-1	NA	63838856	63909579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63906087_63906115_63908876
transcript_31350.known	chr11	+	2666	18	FSM	ENSG00000072518.22	ENST00000513765.7	2666	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	68.9670700218941	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGCGGTTGCACAGAG	286	False	NA	NA	False	NA	NA	NA	63839463	63909520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902600_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63908259_63908305_63908876
transcript_31358.known	chr11	+	2862	18	FSM	ENSG00000072518.22	ENST00000509502.6	2862	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	68.477359681338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGTGGGAGATTGTTCT	-17	True	NA	NA	False	NA	NA	NA	63888546	63909398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63888965_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63908259_63908305_63908876
transcript_31363.known	chr11	+	2379	17	FSM	ENSG00000072518.22	ENST00000425897.3	2379	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	66.4494344878119	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCGGGGGCGGCGGGGGC	252	False	NA	NA	False	NA	NA	NA	63839429	63909247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63908876
transcript_31366.known	chr11	+	2502	17	FSM	ENSG00000072518.22	ENST00000679216.1	2502	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	54.6311137882983	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTCGCCTAAACCAAGA	286	False	NA	NA	False	NA	NA	NA	63839463	63909539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63904785_63905044_63906087_63906115_63908876
transcript_31367.known	chr11	+	2924	17	FSM	ENSG00000072518.22	ENST00000508192.5	2924	17	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	39.7269980617715	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGGGTGGATGGGGG	81	False	NA	NA	False	NA	NA	NA	63839004	63909484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63904785_63905044_63908259_63908305_63908876
transcript_31370.known	chr11	+	2903	16	FSM	ENSG00000072518.22	ENST00000350490.11	2903	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_15	54.0183507913952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	-26	True	NA	NA	False	AAAAAG	-18	NA	63839092	63909596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63904785_63905044_63908876
transcript_31375.nnic	chr11	+	1894	13	NNC	ENSG00000072518.22	novel	2903	16	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	61.5999639249534	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	34	False	NA	NA	False	AAAAAG	-18	NA	63838957	63909596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902268_63909422
transcript_3138.known	chr1	-	2819	3	FSM	ENSG00000116685.16	ENST00000376572.8	2819	3	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	51.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-12	True	NA	-7	True	AATAAA	-18	NA	11926427	11919590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11920333_11922635_11923490_11925204
transcript_31386.known	chr11	-	2915	12	FSM	ENSG00000167771.6	ENST00000301459.5	2915	12	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	15.2440206405415	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGAGTTTTCTTTCC	-3	True	NA	-14	True	AATAAA	-7	NA	63917164	63911229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63912180_63912304_63912535_63912675_63912734_63912869_63912948_63913953_63914170_63914260_63914331_63914416_63914542_63914654_63914817_63914901_63914955_63915177_63915259_63915554_63915612_63916329
transcript_31391.known	chr11	+	3649	8	FSM	ENSG00000110583.13	ENST00000377793.9	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	27.3167362917434	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	8	True	NA	14	True	AATAAA	-15	NA	63939001	63957319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_31395.known	chr11	+	1035	8	FSM	ENSG00000110583.13	ENST00000542163.1	1035	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.6390290894956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTCCTCTTTCCTGGT	0	True	NA	NA	False	NA	NA	NA	63939247	63954519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939535_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_31396.known	chr11	+	958	7	FSM	ENSG00000110583.13	ENST00000534965.5	958	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	59.6703909452214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGAAAGGGAGAGGG	2	True	NA	NA	False	NA	NA	NA	63938995	63954675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939103_63945839_63945936_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_31400.known	chr11	+	4707	7	FSM	ENSG00000110583.13	ENST00000338447.10	4707	7	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_2	24.6672297233034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	NA	False	NA	14	True	AATAAA	-15	NA	63938958	63957319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939103_63945839_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_31406.known	chr11	+	577	5	FSM	ENSG00000110583.13	ENST00000539656.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	64.9629702215039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGCCAGGCTGCGCCCT	8	True	NA	NA	False	NA	NA	NA	63939001	63954586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63953971_63954050_63954337
transcript_31410.nic	chr11	-	1390	11	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	-169	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	62.8844177837404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	NA	False	NA	-8	True	AATAAA	-16	NA	64166282	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63998688_63998837_63998873_63998954_63999001_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31411.known	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	23.4486673395313	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	12	True	NA	-8	True	AATAAA	-16	NA	64166113	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31415.nic	chr11	-	1744	10	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	184	junction_6	23.8374122383748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-12	True	NA	-8	True	AATAAA	-16	NA	64166137	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31416.nic	chr11	-	1962	10	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	-411	0	intron_retention	FALSE	canonical	3	184	junction_6	24.3173463464526	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	NA	False	NA	-8	True	AATAAA	-16	NA	64166524	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63998688_63998837_63998873_63998954_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31417.known	chr11	-	1214	10	FSM	ENSG00000133315.12	ENST00000675777.1	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	68.6990215036252	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTACTGTC	12	True	NA	-16	True	AATAAA	-8	NA	64166113	63998565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63998688_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31421.nic	chr11	-	1732	9	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	-31	0	intron_retention	FALSE	canonical	3	184	junction_5	25.3275418270309	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-19	True	NA	-8	True	AATAAA	-16	NA	64166144	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63998873_63998954_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31424.nic	chr11	-	2164	8	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	184	junction_4	25.6276317712754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	12	True	NA	-8	True	AATAAA	-16	NA	64166113	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63998873_63998954_63999405_63999529_63999561_63999641_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31426.nic	chr11	-	1783	8	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	184	junction_4	26.1502721724627	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	12	True	NA	-8	True	AATAAA	-16	NA	64166113	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31430.nic	chr11	-	2247	7	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	184	junction_3	26.954694499392	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	11	True	NA	-8	True	AATAAA	-16	NA	64166114	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63999405_63999529_63999561_63999641_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31434.nic	chr11	-	2621	5	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	-169	0	intron_retention	FALSE	canonical	3	184	junction_1	29.1150734156725	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	NA	False	NA	-8	True	AATAAA	-16	NA	64166282	63998557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31435.known	chr11	-	459	5	FSM	ENSG00000133315.12	ENST00000542359.5	459	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	97.1004634386469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCATCTAAATCATGAC	350	False	NA	-10	True	AATAAA	-19	NA	64165775	64009012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64009144_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31440.nic	chr11	-	2968	4	ISM	ENSG00000133315.12	ENST00000542359.5	459	5	-390	3989	-52	-3989	5prime_fragment	FALSE	canonical	3	184	junction_1	27.6204433144888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTAACCATGCTAGCAT	NA	False	NA	NA	False	NA	NA	NA	64166165	64013001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_64015282_64151238_64151356_64152291_64152394_64165696
transcript_31445.known	chr11	-	868	4	FSM	ENSG00000133315.12	ENST00000538595.1	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	108.788275512065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGCTTTTCGGGGCTGC	68	False	NA	NA	False	AATAAA	-15	NA	64166057	64148746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64149035_64151238_64151356_64152291_64152394_64165696
transcript_31448.nic	chr11	-	3997	3	ISM	ENSG00000133315.12	ENST00000542359.5	459	5	-369	138896	-31	838	5prime_fragment	FALSE	canonical	3	235	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACGGCATGGTGGTGTG	-19	True	NA	NA	False	NA	NA	NA	64166144	64147908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_64151356_64152291_64152394_64165696
transcript_31449.known	chr11	-	899	4	FSM	ENSG00000133315.12	ENST00000545464.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	110.671686633132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGGAAGCACATGGGG	19	True	NA	NA	False	NA	NA	NA	64166106	64000073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64000344_64151238_64151356_64152291_64152394_64165696
transcript_31454.known	chr11	+	1259	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	713.030153640083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTCGTTGGGTTC	5	True	NA	NA	False	NA	NA	NA	63986841	63997850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_31459.known	chr11	+	494	2	FSM	ENSG00000176340.4	ENST00000314133.4	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	3016	junction_1	0	906	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	14	True	NA	48	True	AATAAA	-17	NA	63974619	63976543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63974795_63976224
transcript_31460.known	chr11	+	1701	7	FSM	ENSG00000167770.13	ENST00000538426.6	1701	7	0	0	0	0	multi-exon	FALSE	canonical	3	1737	junction_4	226.761744765048	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	3	True	NA	26	True	AATAAA	-18	NA	63986437	63998412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_31461.known	chr11	+	2315	2	FSM	ENSG00000167770.13	ENST00000447683.2	2315	2	0	0	0	0	multi-exon	FALSE	canonical	3	2341	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAAAT	14	True	NA	NA	False	NA	NA	NA	63986448	63990585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63986515_63988336
transcript_31477.known	chr11	+	2140	14	FSM	ENSG00000168439.17	ENST00000305218.9	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	2474	junction_8	241.276143691814	2757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGGCCTTGAGTG	-18	True	NA	37	True	AATAAA	-25	NA	64186170	64204543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_31482.known	chr11	+	1900	14	FSM	ENSG00000168439.17	ENST00000538945.5	1900	14	0	0	0	0	multi-exon	FALSE	canonical	1	94	junction_2	782.061439194234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTATTTGGGGCA	15	True	NA	-98	True	NA	NA	NA	64186203	64204408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64186271_64193077_64193288_64194260_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_3150.known	chr1	+	2976	19	FSM	ENSG00000083444.17	ENST00000196061.5	2976	19	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_7	18.818578290851	1020	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGGAAGATGCTCAGG	-1	True	NA	37	True	ATTAAA	-15	NA	11934716	11975537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11934856_11947975_11948068_11949772_11949907_11950356_11950521_11952622_11952736_11954829_11954894_11956916_11957015_11957841_11957944_11958515_11958648_11960645_11960768_11963531_11963637_11964174_11964301_11964643_11964786_11965479_11965594_11966250_11966317_11966986_11967092_11970669_11970817_11972871_11972998_11974652
transcript_31515.known	chr11	+	772	5	FSM	ENSG00000168439.17	ENST00000543847.1	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	2944	junction_2	114.874931991275	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGACATCTGTTGACCTT	-6	True	NA	NA	False	TATAAA	-24	NA	64186224	64195876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644
transcript_31538.known	chr11	-	968	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	96.3497031968571	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATCATCCTGTAGCT	-13	True	NA	-16	True	TATAAA	-45	NA	64226186	64223815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_31543.known	chr11	-	941	7	FSM	ENSG00000149743.14	ENST00000541278.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	127.500871456717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACATCTGGTCTTCCTT	8125	False	NA	0	True	AAAAAG	-44	NA	64226254	64223799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_31547.known	chr11	-	865	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	104.007611900925	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	23	True	NA	1	True	AAAAAG	-45	NA	64226150	64223798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
transcript_31555.nic	chr11	+	1006	6	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	52	junction_1	113.92032303325	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-4	True	NA	44	True	AATAAA	-17	NA	64226247	64230016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64226298_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_31557.known	chr11	+	1110	6	FSM	ENSG00000149761.9	ENST00000279206.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_3	46.8299049753467	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-13	True	NA	44	True	AATAAA	-17	NA	64226273	64230016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64226428_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_31567.known	chr11	-	1726	6	FSM	ENSG00000149743.14	ENST00000539436.5	1726	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	104.878977874501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	8150	False	NA	-30	True	TATAAA	-31	NA	64226229	64223829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785_64225870_64226049
transcript_31572.nic	chr11	+	892	5	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	153.569202641676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	11	False	NA	44	True	AATAAA	-17	NA	64226262	64230016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64226298_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_31576.known	chr11	+	986	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	125.835954718832	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	3	True	NA	35	True	AATAAA	-8	NA	64226289	64230007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_31600.known	chr11	-	923	2	FSM	ENSG00000256116.1	ENST00000534988.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCAATGCCACTGCCCA	9194	False	NA	NA	False	NA	NA	NA	64234292	64229213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64230038_64234193
transcript_31601.known	chr11	+	2499	15	FSM	ENSG00000149781.13	ENST00000345728.10	2499	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.7083229633002	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTCTCTGGAGCTGTG	18	True	NA	28	True	TATAAA	-25	NA	64206720	64223891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64206815_64207350_64207525_64210610_64210845_64211051_64211172_64211274_64211444_64211644_64211748_64219250_64219359_64219523_64219659_64219739_64219790_64219890_64220016_64220219_64220327_64220435_64220670_64221015_64221141_64223047_64223190_64223312
transcript_31602.known	chr11	+	1015	5	FSM	ENSG00000110011.14	ENST00000321460.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	71.6955368206418	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	26	False	NA	19	True	AATAAA	-13	NA	64230757	64234281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232700_64232866_64233893
transcript_31604.known	chr11	+	574	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	159.457831416334	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	11	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_31606.nnic	chr11	+	573	6	NNC	ENSG00000173486.14	novel	574	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	357.319688794222	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	-23	True	NA	18	True	AAAACA	-39	NA	64241060	64244132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_64241133_64242418_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_31607.known	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	380.521747078928	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	72	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_31608.known	chr11	+	1655	6	FSM	ENSG00000286264.2	ENST00000652762.2	1655	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	356.141320264863	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	11	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64242214_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_31612.known	chr11	+	705	5	FSM	ENSG00000173486.14	ENST00000541388.1	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	175.095688125093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAAAAACACTTA	-10	True	NA	-11	True	AAAACA	-10	NA	64241073	64244103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243498_64243840_64243877_64243967
transcript_31618.known	chr11	+	611	6	FSM	ENSG00000173486.14	ENST00000652094.1	611	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	399.432397283946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAAGGAGTAAGCCTG	32	True	NA	10	True	AAAACA	-31	NA	64241664	64244124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64241748_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_31619.nnic	chr11	-	3275	7	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-4474	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	2213.74117728338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	1155	False	NA	-22	True	AATAAA	-27	NA	64251417	64244479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400_64248599_64249088
transcript_31620.nnic	chr11	-	2980	7	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-4474	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_6	2209.85477778267	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	1155	False	NA	-22	True	AATAAA	-27	NA	64251417	64244479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400_64248599_64249383
transcript_31624.known	chr11	-	989	4	FSM	ENSG00000173457.11	ENST00000309318.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	4372	junction_1	91.0396738912339	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-12	True	NA	-21	True	AATAAA	-28	NA	64246943	64244478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415
transcript_31626.known	chr11	+	431	2	FSM	ENSG00000256940.3	ENST00000538355.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGATTAAATAGGAAAA	995	False	NA	-15	True	AATGAA	-39	NA	64247053	64248177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64247260_64247952
transcript_31627.known	chr11	+	533	2	FSM	ENSG00000256940.3	ENST00000663760.2	551	2	5	13	5	-13	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTGGAAAGTTCAATTAC	3	True	NA	5	True	ATTAAA	-9	NA	64245960	64248197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64246249_64247952
transcript_31632.known	chr11	+	3946	29	FSM	ENSG00000149782.13	ENST00000325234.5	3946	29	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	101.00764645737	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGCAGTGTGATTT	54	False	NA	27	True	AATAAA	-16	NA	64251574	64267923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64251749_64254951_64255039_64255233_64255314_64255395_64255450_64255540_64255617_64255720_64255822_64256375_64256543_64256617_64256765_64258472_64258714_64258884_64258970_64259057_64259245_64260028_64260235_64261399_64261497_64261580_64261666_64261951_64262077_64262406_64262562_64262646_64262809_64263497_64263598_64263690_64263796_64264020_64264113_64264950_64265105_64265191_64265228_64265309_64265503_64265885_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352
transcript_31649.known	chr11	+	4192	31	FSM	ENSG00000149782.13	ENST00000279230.12	4192	31	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_15	46.1876486616161	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGCAGTGTGATTT	9	True	NA	27	True	AATAAA	-16	NA	64251529	64267923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64251749_64254414_64254493_64254747_64254817_64254897_64255039_64255233_64255314_64255395_64255450_64255540_64255617_64255720_64255822_64256375_64256543_64256617_64256765_64258472_64258714_64258884_64258970_64259057_64259245_64260028_64260235_64261399_64261497_64261580_64261666_64261951_64262077_64262406_64262562_64262646_64262809_64263497_64263598_64263690_64263796_64264020_64264113_64264950_64265105_64265191_64265228_64265309_64265503_64265885_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352
transcript_31653.nic	chr11	+	2091	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	50.7229368878677	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	22	False	NA	15	True	AATAAA	-19	NA	64284793	64289494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_31654.nic	chr11	+	1982	8	NIC	ENSG00000173264.15	novel	1485	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	60.9027327559516	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	22	False	NA	12	True	AATAAA	-16	NA	64284793	64289491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_31663.nnic	chr11	+	2234	8	NNC	ENSG00000173264.15	novel	2166	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	56.1724749212237	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	11	True	NA	15	True	AATAAA	-19	NA	64285504	64289494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_64286235_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_31669.known	chr11	+	1478	7	FSM	ENSG00000173264.15	ENST00000377702.8	1478	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	80.3839743564184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	9	True	NA	15	True	AATAAA	-19	NA	64285256	64289494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288339_64288469_64288602_64288722_64289036
transcript_31671.known	chr11	+	1843	7	FSM	ENSG00000173264.15	ENST00000539851.5	1843	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	84.2504533453019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTGTCATCTGCCT	5	True	NA	21	True	AATAAA	-25	NA	64284810	64289500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64285263_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64289036
transcript_31673.known	chr11	+	2166	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	13.2245562832516	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	-30	True	NA	15	True	AATAAA	-19	NA	64285847	64289494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_31674.known	chr11	+	1485	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	47.1616605117146	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	210	False	NA	12	True	AATAAA	-16	NA	64286419	64289491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_31694.known	chr11	-	631	5	FSM	ENSG00000002330.14	ENST00000394531.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	171.689217774443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGATCGGAACTTGGGC	37	True	NA	NA	False	NA	NA	NA	64284653	64270255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64270338_64271612_64271804_64276903_64277044_64284181_64284377_64284630
transcript_31699.known	chr11	-	929	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	62.9655990733565	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	25	True	NA	-3	True	AATAAA	-19	NA	64284665	64269829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
transcript_31703.known	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	2.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	477	False	NA	-3	True	AATAAA	-19	NA	64284639	64269829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64270338_64271612_64271804_64284181
transcript_31705.known	chr11	+	780	5	FSM	ENSG00000219435.6	ENST00000328404.8	780	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.12132034355964	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGAGTCAGTGCAGGAC	-16	True	NA	15	True	AATAAA	-16	NA	64300357	64304770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64300432_64300656_64300988_64303481_64303562_64303772_64303840_64304542
transcript_31711.known	chr11	+	2266	7	FSM	ENSG00000173153.17	ENST00000677967.1	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	89.0781492099306	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTGTGTTTGGTGT	2	True	NA	15	True	AATATA	-14	NA	64305523	64316738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64305737_64307167_64307505_64313950_64314068_64314238_64314368_64314743_64314912_64315000_64315271_64315706
transcript_31716.known	chr11	+	2283	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	87.6863095864394	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGGTGTCATTG	17	False	NA	20	True	AATATA	-19	NA	64306226	64316743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
transcript_31726.known	chr11	-	561	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_2	1975.4257487663	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-9	True	NA	-88	True	ATTAAA	-12	NA	64317558	64316694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
transcript_31727.known	chr11	-	659	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	4253	junction_2	79	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGCGGTTTCTCTTTGC	-4	True	NA	-89	True	ATTAAA	-11	NA	64317553	64316695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64317148_64317263_64317366_64317448
transcript_31728.known	chr11	-	704	2	FSM	ENSG00000173113.7	ENST00000535126.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	4411	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	563	False	NA	-84	True	ATTAAA	-16	NA	64317510	64316690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64317148_64317263
transcript_31732.known	chr11	+	860	6	FSM	ENSG00000126432.14	ENST00000265462.9	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	2847	junction_3	304.306030173574	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	-57	True	NA	26	True	AATAAA	-20	NA	64318120	64321811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64318387_64319733_64319869_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_31737.known	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	1429.73467818333	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	4	True	NA	-45	True	NA	NA	NA	64318181	64321740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
transcript_31738.nnic	chr11	+	755	5	NIC	ENSG00000126432.14	novel	860	6	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	288	junction_1	1371.03254884777	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	112	False	NA	26	True	AATAAA	-20	NA	64318090	64321811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64318387_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_31740.known	chr11	+	463	4	FSM	ENSG00000126432.14	ENST00000347941.4	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	1533.21803914367	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGGGGCCCTGCAA	4	True	NA	-43	True	NA	NA	NA	64318181	64321742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64318387_64320864_64320904_64321006_64321069_64321585
transcript_31741.nic	chr11	+	4712	25	ISM	ENSG00000168071.22	ENST00000356786.10	4934	27	647	9	628	0	3prime_fragment	FALSE	canonical	3	17	junction_7	15.2606975230128	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGAGTCTTGCTCTG	611	False	NA	12	True	AATAAA	-12	NA	64340850	64357525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_64341019_64341108_64341179_64341269_64341329_64341420_64341505_64341598_64341743_64341993_64342140_64342293_64342376_64342521_64342681_64343178_64343326_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550_64349669_64351159_64351256_64351475_64351617_64352129_64352387_64352743_64352888_64353053_64353241_64353350_64353497_64353714_64353814_64354003_64354171_64355193_64355401_64355559_64355629_64357038
transcript_31744.nic	chr11	+	3739	14	ISM	ENSG00000168071.22	ENST00000463837.5	5235	25	628	6829	628	0	internal_fragment	FALSE	canonical	3	17	junction_7	5.06642270771542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAAAACCCT	611	False	NA	NA	False	NA	NA	NA	64340850	64350695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_64341019_64341108_64341179_64341269_64341329_64341420_64341505_64341598_64341743_64341993_64342140_64342293_64342376_64342521_64342681_64343178_64343326_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550
transcript_31751.known	chr11	+	2909	7	FSM	ENSG00000168071.22	ENST00000494566.5	2909	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.9828947294336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAAAACCCT	1796	False	NA	NA	False	NA	NA	NA	64342730	64350695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64342808_64343178_64343331_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550
transcript_31753.known	chr11	+	779	2	FSM	ENSG00000168071.22	ENST00000472524.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGCTCTGTCTGTT	29	False	NA	18	True	AATAAA	-18	NA	64355342	64357531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64355629_64357038
transcript_31755.known	chr11	+	2532	17	FSM	ENSG00000162302.13	ENST00000528355.5	2532	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	13.133330689509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTGGGGAGTGGGGT	14	True	NA	NA	False	NA	NA	NA	64359181	64371685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64359291_64359377_64359404_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368467_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_3176.nic	chr1	+	4495	20	NIC	ENSG00000116688.18	novel	4772	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	94.6583300401152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGAGATCTGTCTT	52	False	NA	11	True	AATAAA	-14	NA	11980420	12013505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11980485_11981969_11982115_11982522_11982591_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_31760.known	chr11	+	2114	17	FSM	ENSG00000162302.13	ENST00000530504.1	2114	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	13.8270568090248	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGCGGCGGAAGCAGA	75	False	NA	NA	False	NA	NA	NA	64359283	64371341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368485_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_31762.known	chr11	+	3121	17	FSM	ENSG00000162302.13	ENST00000528057.5	3121	17	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	12.608900626145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTCCTCGTTCGTG	-20	True	NA	17	True	AATAAA	-26	NA	64359147	64372215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368488_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_31768.nnic	chr11	+	2983	16	NIC	ENSG00000162302.13	novel	3128	17	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_8	13.785016019819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTCCTCGTTCGTG	3828	False	NA	17	True	AATAAA	-26	NA	64359141	64372215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64368131_64368261_64368467_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_3177.known	chr1	+	4580	20	FSM	ENSG00000116688.18	ENST00000675512.1	4580	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	101.985686899731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	2	True	NA	6	True	AATAAA	-9	NA	11980443	12013500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11981973_11982115_11989164_11989344_11992278_11992464_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_31778.known	chr11	+	2340	2	FSM	ENSG00000181908.5	ENST00000316124.3	2340	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCAGCCTCTTT	122	False	NA	NA	False	ATTAAA	-18	NA	64449073	64451657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64449653_64449896
transcript_3178.known	chr1	+	4766	20	FSM	ENSG00000116688.18	ENST00000675817.1	4766	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	95.7180474014067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	9542	False	NA	6	True	AATAAA	-9	NA	11980208	12013500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003757_12003890_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_31789.known	chr11	-	2221	17	FSM	ENSG00000068831.19	ENST00000377497.7	2221	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	62.6465469419504	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-1	True	NA	-2	True	AATAAA	-24	NA	64744834	64726910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
transcript_3179.nic	chr1	+	4573	19	NIC	ENSG00000116688.18	novel	4772	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_1	71.2810469502307	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGAGATCTGTCTT	-7	True	NA	11	True	AATAAA	-14	NA	11980434	12013505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11980485_11981809_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_31794.known	chr11	-	642	5	FSM	ENSG00000068831.19	ENST00000377487.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	63.5708266424151	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-26	True	NA	-2	True	AATAAA	-17	NA	64744859	64740865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
transcript_31796.known	chr11	-	444	4	FSM	ENSG00000068831.19	ENST00000394428.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	97.3527377917825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9557	False	NA	-2	True	AATAAA	-17	NA	64742937	64740865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742033_64742793
transcript_31797.known	chr11	-	453	3	FSM	ENSG00000068831.19	ENST00000394429.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	105.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9557	False	NA	-2	True	AATAAA	-17	NA	64742937	64740865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64741080_64741438_64741534_64742793
transcript_31799.known	chr11	-	2866	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	5.6037185912447	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTACTCCTCTTTGT	-3	True	NA	-9	True	AATAAA	-17	NA	64759974	64746397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
transcript_31803.known	chr11	-	3094	14	FSM	ENSG00000168066.21	ENST00000334944.9	3094	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	246.524456580494	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	324	False	NA	-22	True	AATAAA	-22	NA	64778786	64764605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64765519_64765950_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_31804.nic	chr11	-	3041	14	NIC	ENSG00000168066.21	novel	3094	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_13	319.213252531464	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-7	True	NA	-22	True	AATAAA	-22	NA	64778778	64764605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986_64778147_64778361
transcript_31806.nic	chr11	-	3673	14	NIC	ENSG00000168066.21	novel	3631	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	46	junction_13	303.628919423133	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCTGCTTCTTTATTT	-7	True	NA	-27	True	AATAAA	-17	NA	64778778	64764610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986_64778147_64778361
transcript_31811.known	chr11	-	2854	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	274.999128786499	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	363	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_31814.known	chr11	-	3282	13	FSM	ENSG00000168066.21	ENST00000377390.8	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	144.805113284488	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-10	True	NA	-22	True	AATAAA	-22	NA	64778542	64764605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_3183.known	chr1	+	4407	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	34.4484316688648	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGATCTGTCTTTTT	2	True	NA	14	True	AATAAA	-17	NA	11980443	12013508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_31834.known	chr11	-	983	2	FSM	ENSG00000168066.21	ENST00000463343.1	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATGACAAAA	8	True	NA	NA	False	NA	NA	NA	64778763	64776045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64776627_64778361
transcript_31835.known	chr11	-	2931	32	FSM	ENSG00000168067.12	ENST00000377350.7	2931	32	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	19.6599075964602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTGGTCCCTCTGGGT	-2	True	NA	-40	True	ATTAAA	-15	NA	64803241	64789136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64790393_64790463_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797169_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
transcript_31836.known	chr11	-	7147	32	FSM	ENSG00000168067.12	ENST00000294066.7	7147	32	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_18	13.7687909628465	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTGTCTTTGTTGGAT	7519	False	64803239	NA	False	AATAAA	-18	NA	64803214	64784917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64790393_64790463_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797193_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
transcript_3184.known	chr1	+	4555	19	FSM	ENSG00000116688.18	ENST00000675053.1	4555	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.3696145568781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	9524	False	NA	6	True	AATAAA	-9	NA	11980190	12013500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11982066_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_31842.nnic	chr11	-	2867	31	NIC	ENSG00000168067.12	novel	7147	32	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	21.0815611903441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTGGTCCCTCTGGGT	7511	False	64803239	-40	True	ATTAAA	-15	NA	64803222	64789136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797193_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
transcript_3185.known	chr1	+	4514	18	FSM	ENSG00000116688.18	ENST00000674817.1	4514	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	67.328045745771	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGAGATCTGTCTT	9522	False	NA	11	True	AATAAA	-14	NA	11980188	12013505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_31850.known	chr11	-	2800	11	FSM	ENSG00000133895.18	ENST00000672304.1	2800	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	201.349546808529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAATACATTTTGTTAA	3	True	NA	-42	True	NA	NA	NA	64810551	64803541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64805887_64806014_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810525
transcript_31867.known	chr11	-	2960	10	FSM	ENSG00000133895.18	ENST00000315422.9	2960	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	89.2499610955409	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	3	True	NA	-14	True	AATACA	-18	NA	64810551	64803513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810267
transcript_31870.known	chr11	-	2712	10	FSM	ENSG00000133895.18	ENST00000450708.7	2712	10	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_9	107.646540946645	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCGCAAGTCCATGT	3	True	NA	-16	True	AATACA	-16	NA	64810551	64803515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810513
transcript_31871.known	chr11	-	2661	10	FSM	ENSG00000133895.18	ENST00000440873.6	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	126.79827470883	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTGTTTTGTACATA	-27	True	NA	-85	True	NA	NA	NA	64810581	64803584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810525
transcript_31875.known	chr11	-	2614	10	FSM	ENSG00000133895.18	ENST00000377321.5	2614	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	157.17576855935	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCGCAAGTCCATGT	-4	True	NA	-16	True	AATACA	-16	NA	64810558	64803515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807995_64808100_64809664_64810133_64810513
transcript_31887.known	chr11	-	3124	9	FSM	ENSG00000133895.18	ENST00000478548.3	3124	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_8	114.118838826024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATTTTGTTAAAAAAAA	32	True	NA	-36	True	AAGAAA	-6	NA	64810522	64803535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810513
transcript_31906.known	chr11	-	2731	10	FSM	ENSG00000133895.18	ENST00000312049.11	2731	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	147.903455330717	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCGCAAGTCCATGT	1	True	NA	-16	True	AATACA	-16	NA	64810686	64803515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810629
transcript_31908.known	chr11	-	6161	37	FSM	ENSG00000171219.9	ENST00000342711.6	6161	37	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_30	7.38429263895857	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTCCTTGCCTGGA	10	True	NA	NA	False	AATAAA	-16	NA	64844653	64823051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64824530_64826469_64826556_64826670_64826795_64827049_64827168_64827277_64827399_64827526_64827612_64827685_64827784_64829470_64830071_64830193_64830257_64831504_64831722_64832427_64832510_64832603_64832744_64832825_64832960_64833230_64833337_64833599_64833660_64833737_64833837_64833924_64833978_64834265_64834355_64834428_64834578_64834848_64834964_64835046_64835154_64835346_64835420_64835499_64835622_64835761_64835852_64836116_64836297_64836426_64836531_64836738_64836820_64836921_64837020_64838082_64838163_64838653_64838903_64839032_64839234_64839477_64839572_64840119_64840269_64840552_64840649_64841649_64841734_64841812_64841905_64844409
transcript_31916.known	chr11	-	4453	5	FSM	ENSG00000110047.18	ENST00000320631.8	4453	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	11.3468057179102	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGGTCCTGAAAGCTT	0	True	NA	NA	False	ATTAAA	-21	NA	64878621	64851641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64854858_64855321_64855487_64859923_64860337_64874420_64874519_64878060
transcript_31920.nnic	chr11	-	6337	41	NNC	ENSG00000110046.13	novel	6318	41	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_29	10.6160256216722	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCTCTCAGATCCTCT	-1	True	NA	-14	True	AATAAA	-14	NA	64917246	64894545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902509_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907416_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
transcript_31922.nnic	chr11	-	6331	41	NNC	ENSG00000110046.13	novel	6318	41	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	10.99488517448	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCTCTCAGATCCTCT	-1	True	NA	-14	True	AATAAA	-14	NA	64917246	64894545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902515_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907416_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
transcript_31923.known	chr11	-	6318	41	FSM	ENSG00000110046.13	ENST00000377264.8	6318	41	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_23	12.1592557338021	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCTCTCAGATCCTCT	-2	True	NA	-14	True	AATAAA	-14	NA	64917209	64894545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902515_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907440_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
transcript_31943.known	chr11	-	752	4	FSM	ENSG00000149735.7	ENST00000279168.7	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTTTATTAAGTCT	-1	True	NA	-4	True	AATAAA	-17	NA	64935893	64934470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64934875_64934990_64935176_64935357_64935461_64935833
transcript_31945.known	chr11	+	2729	14	FSM	ENSG00000068971.14	ENST00000164133.7	2729	14	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_5	5.74610750676403	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTTGCTTTATTTAG	-13	True	NA	14	True	AATAAA	-14	NA	64924688	64934475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64925029_64925470_64925934_64926711_64926909_64927801_64927904_64928065_64928159_64928294_64928426_64930321_64930382_64930480_64930590_64931435_64931490_64931558_64931610_64931748_64931869_64932764_64932893_64933144_64933247_64933696
transcript_31946.known	chr11	-	2066	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTGCCTAGTTACTT	-1	True	NA	-1	True	AATAAA	-17	NA	64996971	64987944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64989813_64994447_64994550_64996875
transcript_31950.known	chr11	+	830	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	1271.76548152558	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	36	True	NA	18	True	AATAAA	-17	NA	65014179	65022184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
transcript_31954.known	chr11	+	932	5	FSM	ENSG00000213465.8	ENST00000246747.9	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	3062	junction_4	164.746775385742	1990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	16	True	NA	18	True	AATAAA	-17	NA	65014159	65022184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720
transcript_31959.known	chr11	+	795	4	FSM	ENSG00000213465.8	ENST00000533729.1	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	1552.79754708147	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAACCGCTCCTTGCC	-18	True	NA	-6	True	NA	NA	NA	65014191	65022160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65021720
transcript_31962.known	chr11	+	1228	3	FSM	ENSG00000213465.8	ENST00000524585.1	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	3424	junction_1	32.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCCCCCATATACCCTT	27	True	NA	-80	True	AAAAAG	-32	NA	65014170	65019585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570
transcript_31969.known	chr11	+	1908	8	FSM	ENSG00000110025.13	ENST00000377244.8	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	38.186438451794	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTAATTCATTTAGTA	-19	True	NA	16	True	AATAAA	-17	NA	65027438	65040572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65038571_65038830_65039685
transcript_3197.nic	chr1	+	1760	10	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	220.549314213398	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGCTCTGCAGCTCAA	0	True	NA	11	True	AATAAA	-2	NA	12019439	12032025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031540
transcript_31970.nnic	chr11	-	2846	20	Fusion	ENSG00000168060.16_ENSG00000146670.10	novel	2708	18	NA	NA	-8347	0	multi-exon	FALSE	canonical	1	1	junction_4	4.69985559983281	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCCTTTTATTACCTG	NA	False	NA	NA	False	AATAAA	-29	NA	65066900	65044817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65046444_65046527_65047474_65047566_65047646_65047739_65047980_65048049_65048151_65048216_65048299_65048386_65053217_65053338_65053490_65053577_65054249_65054355_65054454_65054739_65057370_65057494_65057874_65057997_65058077_65058251_65058336_65058408_65061007_65061204_65066812
transcript_31976.known	chr11	-	800	5	FSM	ENSG00000168060.16	ENST00000526516.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	6.51920240520265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCACCCTGAGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	65047937	65045303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646
transcript_31978.known	chr11	+	1362	3	FSM	ENSG00000168061.17	ENST00000531072.1	1362	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	59	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATAAAAGGAACTTGTT	-21	True	NA	-9	True	NA	NA	NA	65040900	65044799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65041107_65041285_65041867_65044224
transcript_3198.known	chr1	+	1541	10	FSM	ENSG00000116691.11	ENST00000235332.6	1541	10	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	94.818475045091	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	-2	True	NA	31	True	AATAAA	-22	NA	12019497	12032045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_31981.known	chr11	+	1366	3	FSM	ENSG00000168061.17	ENST00000674184.1	1366	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCACTAGATGTGATTT	16	True	NA	20	True	AATAAA	-21	NA	65041244	65044828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65041867_65043024_65043165_65044224
transcript_31982.known	chr11	+	1261	2	FSM	ENSG00000168061.17	ENST00000652489.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCACTAGATGTGATTT	-19	True	NA	20	True	AATAAA	-21	NA	65041209	65044828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65041867_65044224
transcript_31983.known	chr11	-	769	2	FSM	ENSG00000168060.16	ENST00000531174.1	769	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCAGCACCCAGGGCAG	0	True	NA	NA	False	GGGGCT	-3	NA	65047887	65045998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65046527_65047646
transcript_31987.known	chr11	-	2475	6	FSM	ENSG00000146670.10	ENST00000275517.8	2475	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	40.8900966005217	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTGTTTCTTTTATT	24	True	NA	-5	True	ATTAAA	-18	NA	65084040	65077452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65079188_65079352_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_31989.known	chr11	-	1012	5	FSM	ENSG00000146670.10	ENST00000404147.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	35.2845575287547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGACTCTCCCTCCT	17	True	NA	NA	False	NA	NA	NA	65084047	65079087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_31993.nic	chr11	+	1653	11	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	0	0	multi-exon	FALSE	canonical	3	21	junction_10	192.012916232216	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	4184	False	NA	20	True	AATGAA	-15	NA	65111844	65116230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115774_65115823_65115892
transcript_31997.known	chr11	+	2661	10	FSM	ENSG00000149823.9	ENST00000279281.8	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_3	34.0449956439278	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTCCTTGTCTGCGTTCC	-10	True	NA	27	True	NA	NA	NA	65096213	65111862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65096479_65096997_65097128_65107580_65107728_65107802_65108023_65108196_65108915_65109279_65109496_65109704_65109924_65110481_65110604_65110693_65110782_65111326
transcript_32.known	ERCC-00085	+	828	1	FSM	ERCC-00085A	DQ883669	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00085_+_0_800
transcript_32002.nic	chr11	+	1723	10	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_9	149.854579715564	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	4184	False	NA	20	True	AATGAA	-15	NA	65111844	65116230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115774
transcript_32003.known	chr11	+	1578	10	FSM	ENSG00000149809.17	ENST00000279263.14	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	31.8189321700846	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	-1	True	NA	20	True	AATGAA	-15	NA	65111871	65116230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_32008.nic	chr11	+	1510	10	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	9	0	multi-exon	FALSE	canonical	3	99	junction_1	131.136438231709	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	4193	False	NA	20	True	AATGAA	-15	NA	65111853	65116230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65111982_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_32017.known	chr11	+	1490	9	FSM	ENSG00000149809.17	ENST00000345348.9	1490	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	164.047058797163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTTCCTCCTTTGGA	11	False	NA	25	True	AATGAA	-20	NA	65111883	65116235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115475_65115599_65115892
transcript_32020.nic	chr11	+	1959	9	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_1	33.0414039501956	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	4184	False	NA	20	True	AATGAA	-15	NA	65111844	65116230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65112068_65112514_65112712_65112810_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_32022.known	chr11	+	1671	9	FSM	ENSG00000149809.17	ENST00000529601.5	1671	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	167.044904142569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAAGCAACAGGGCTG	5	True	NA	NA	False	NA	NA	NA	65111877	65116384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65112068_65112514_65112712_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_32032.known	chr11	+	1382	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	19.7411824801425	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	-4	True	NA	12	True	AATAAA	-18	NA	65084221	65088398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_32042.nic	chr11	+	2040	8	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_1	34.824926564231	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	4184	False	NA	20	True	AATGAA	-15	NA	65111844	65116230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65112068_65112514_65112712_65112810_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115599_65115892
transcript_32059.known	chr11	+	2551	7	FSM	ENSG00000162300.13	ENST00000650243.1	2551	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	83.2401145281929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTATTAAAACACCCGA	-16	True	NA	-1	True	AATAAA	-5	NA	65084209	65088385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65084361_65084690_65084801_65085114_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_32071.known	chr11	+	384	2	FSM	ENSG00000162300.13	ENST00000526791.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGAAAGGATGAGTCTC	24	False	NA	NA	False	AATAAA	-16	NA	65084289	65085003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65084361_65084690
transcript_32072.known	chr11	+	426	2	FSM	ENSG00000149823.9	ENST00000528050.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGCCCCCATTCTCCC	-10	True	NA	NA	False	NA	NA	NA	65096213	65097158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65096479_65096997
transcript_32074.known	chr11	-	1299	1	FSM	ENSG00000174276.7	ENST00000310597.6	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTGCTTGTTTCTGA	-17	True	NA	-8	True	AATAAA	-15	NA	65117701	65116402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65116400_65117700
transcript_32077.known	chr11	-	3144	16	FSM	ENSG00000162298.19	ENST00000526060.5	3144	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	45.0824429979861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGGGGTTTGTGTC	560	False	NA	-32	True	AATAAA	-13	NA	65134429	65127281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134253
transcript_32078.known	chr11	-	3048	16	FSM	ENSG00000162298.19	ENST00000294256.12	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	33.8602356098648	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-10	True	NA	-29	True	AATAAA	-16	NA	65134532	65127278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_32080.known	chr11	-	3038	16	FSM	ENSG00000162298.19	ENST00000377190.8	3038	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	31.2761179745114	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	3	True	NA	-29	True	AATAAA	-16	NA	65134519	65127278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130176_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_32103.known	chr11	-	506	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	5849	junction_4	460.759427467306	2307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-3	True	NA	-4	True	AATAAA	-21	NA	65122134	65120629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
transcript_32104.known	chr11	+	2065	4	FSM	ENSG00000149792.9	ENST00000524482.5	2065	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	334.799774326222	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	1425	False	NA	19	True	ATTAAA	-29	NA	65122182	65127356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122341_65124501_65124653_65125487_65125613_65125725
transcript_32105.known	chr11	+	2026	4	FSM	ENSG00000149792.9	ENST00000279242.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_2	23.2713462342761	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAACTCTTGTAACAC	-4	True	NA	34	True	ATTAAA	-44	NA	65122320	65127371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122425_65124501_65124653_65125487_65125613_65125725
transcript_32108.known	chr11	+	518	3	FSM	ENSG00000149792.9	ENST00000534078.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	364.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTGCTTGCATAAAGGA	-14	True	NA	NA	False	NA	NA	NA	65122310	65126004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122425_65125487_65125613_65125725
transcript_32109.known	chr11	+	688	3	FSM	ENSG00000149792.9	ENST00000533943.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	375.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGAGTGCAGTGGCAT	30	False	NA	NA	False	NA	NA	NA	65122354	65126178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122465_65125487_65125613_65125725
transcript_32110.known	chr11	-	1484	1	FSM	ENSG00000149806.11	ENST00000531357.1	1484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCGCATTGTTTCATCT	8184	False	NA	-8	True	AATAAA	-17	NA	65122117	65120633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120600_65122100
transcript_32111.known	chr11	-	697	4	FSM	ENSG00000149806.11	ENST00000531743.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	6623	junction_2	167.453476125958	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	8244	False	NA	-4	True	AATAAA	-21	NA	65122057	65120629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738
transcript_32112.known	chr11	-	538	5	FSM	ENSG00000149806.11	ENST00000527548.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2973.57246212363	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	8188	False	NA	-5	True	AATAAA	-20	NA	65122113	65120630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122035
transcript_32113.known	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_1	3024.34018515701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	8148	False	NA	-12	True	AATAAA	-13	NA	65122153	65120637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
transcript_32124.known	chr11	+	3083	22	FSM	ENSG00000014216.16	ENST00000533820.5	3083	22	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	175.287286056523	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	NA	False	NA	26	True	AATAAA	-22	NA	65181193	65212006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65181411_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_32127.known	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	187.010470561873	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	28	False	NA	21	True	AATAAA	-17	NA	65181744	65212001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_32129.nic	chr11	+	3166	22	NIC	ENSG00000014216.16	novel	2952	22	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	186.807660551746	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	52	False	NA	21	True	AATAAA	-17	NA	65182003	65212001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_65182309_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_32131.nic	chr11	+	3000	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_1	182.756309003891	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	368	False	NA	21	True	AATAAA	-17	NA	65182402	65212001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_65182542_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_32132.nic	chr11	+	3011	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	188.227801388157	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	378	False	NA	21	True	AATAAA	-17	NA	65182412	65212001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_65182563_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_3215.nic	chr1	+	2082	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	490	junction_1	99.2622788374315	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	0	True	NA	31	True	AATAAA	-22	NA	12019439	12032045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029895_12030027_12030125_12031265_12031404_12031721
transcript_32183.known	chr11	-	1662	2	FSM	ENSG00000254614.2	ENST00000526623.2	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTTGTTTCTCAAAATG	NA	False	NA	NA	False	AATAAA	-22	NA	65181834	65180020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65181073_65181224
transcript_32184.known	chr11	+	2952	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	103.806356439229	2469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	-24	True	NA	26	True	AATAAA	-22	NA	65181927	65212006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_32185.known	chr11	+	3086	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	58.4202661753608	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	12	True	NA	7	True	AATAAA	-3	NA	65182461	65211987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_32186.known	chr11	+	2792	22	FSM	ENSG00000014216.16	ENST00000533129.5	2792	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.715421170058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATATTAGTGATTTT	16	False	NA	17	True	NA	NA	NA	65181732	65211858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65181807_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_32200.known	chr11	+	3544	18	FSM	ENSG00000014138.9	ENST00000265465.8	3544	18	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	13.6878194532249	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCTGTTTTATTTCA	-8	True	NA	20	True	AGTAAA	-21	NA	65261961	65298685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297119
transcript_32205.nnic	chr11	+	3563	18	Fusion	ENSG00000014138.9_ENSG00000149798.5	novel	3544	18	NA	NA	5	-326	multi-exon	FALSE	canonical	3	11	junction_17	44.9350935211866	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGAGCTCCCTGTCCCTT	-12	True	NA	16	True	AATAAA	-17	NA	65261924	65322091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65320543
transcript_32220.known	chr11	+	1963	2	FSM	ENSG00000149798.5	ENST00000279249.3	1963	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCAAGGGACCAACAGC	2	True	NA	4	True	AATAAA	-15	NA	65314865	65322417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65314955_65320543
transcript_32224.known	chr11	+	2462	12	FSM	ENSG00000133884.10	ENST00000252268.8	2462	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	302.002736564691	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGGATGGTTTATCT	5	True	NA	18	True	AATAAA	-18	NA	65333866	65352983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65344579_65344622_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_32234.known	chr11	+	3714	11	FSM	ENSG00000133884.10	ENST00000528416.6	3714	11	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_4	94.8791336385404	2426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCCCAAGCATGCAG	-10	True	NA	3	True	AATAAA	-18	NA	65333851	65354262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_3225.nic	chr1	+	1403	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	173.844578575232	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	0	True	NA	31	True	AATAAA	-22	NA	12019439	12032045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_32256.known	chr11	+	940	4	FSM	ENSG00000133884.10	ENST00000444314.6	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_1	52.7825728815866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACTAGGGAAGCTGAG	-10	True	NA	NA	False	ATTAAA	-39	NA	65333851	65342002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398
transcript_32260.known	chr11	+	2028	2	FSM	ENSG00000173825.7	ENST00000309880.6	2028	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCAGGGTGTTATTTTC	-5	True	NA	12	True	AATAAA	-17	NA	65354750	65357613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65354958_65355792
transcript_32262.known	chr11	-	2196	6	FSM	ENSG00000162241.13	ENST00000294187.10	2196	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.85472369909914	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGACTGCACTCCTGACCT	16	True	NA	-9	True	AATAAA	-15	NA	65382638	65375193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65376676_65376817_65377077_65379375_65379562_65379866_65379939_65380131_65380176_65382485
transcript_32266.known	chr11	+	3685	11	FSM	ENSG00000126391.14	ENST00000317568.10	3685	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	16.2299106590271	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGCAGCTCATGATA	-3	True	NA	NA	False	ATTAAA	-17	NA	65386636	65413525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65386762_65387036_65387122_65389360_65389529_65393572_65393675_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_32274.known	chr11	+	1818	10	FSM	ENSG00000126391.14	ENST00000416776.6	1818	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	25.152865973218	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTTCCCTGGACTTG	17	True	NA	NA	False	NA	NA	NA	65386656	65411780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65386762_65387036_65387122_65389360_65389529_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_32277.known	chr11	+	3514	10	FSM	ENSG00000126391.14	ENST00000355991.9	3514	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	31.0876895964374	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGGCAGCTCATG	-3	True	NA	NA	False	ATTAAA	-14	NA	65386636	65413522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65386762_65387036_65387122_65393572_65393675_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_32281.nnic	chr11	+	3471	9	NIC	ENSG00000126391.14	novel	3685	11	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	33.506529214468	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGCAGCTCATGATA	3646	False	NA	NA	False	ATTAAA	-17	NA	65386580	65413525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_65386762_65387036_65387122_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_32285.known	chr11	+	1519	2	FSM	ENSG00000251562.9	ENST00000508832.2	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTTTATTAGAGAATGT	3	False	NA	7	True	AATAAA	-1	NA	65501847	65503609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65502394_65502636
transcript_32286.known	chr11	+	95	1	FSM	ENSG00000278217.1	ENST00000618249.1	95	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTACATTAATCCTGGA	303	False	NA	-10	True	AATAAA	-22	NA	65502913	65503008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65502900_65503000
transcript_32287.known	chr11	+	394	2	FSM	ENSG00000251562.9	ENST00000617791.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGACAAGCTAGGAA	-2	True	NA	28	True	GATAAA	-28	NA	65499041	65499785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65499339_65499688
transcript_32288.known	chr11	-	4833	28	FSM	ENSG00000168056.18	ENST00000301873.11	4833	28	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_26	35.9859368965293	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGGGCTCCCAGCTTC	-4	True	NA	-3	True	NA	NA	NA	65558359	65538558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540012_65540154_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441_65546565_65546797_65546921_65547438_65547568_65547689_65547822_65547919_65548046_65551125_65551225_65551401_65551475_65551547_65551565_65551971_65552158_65552247_65552407_65552859_65552983_65553163_65553257_65553424_65553531_65553700_65553904_65554050_65554381_65557628
transcript_32290.nnic	chr11	+	2673	18	NNC	ENSG00000142186.18	novel	2636	18	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	93.5235292267734	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	NA	False	NA	28	True	AATAAA	-13	NA	65525065	65538704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_65525265_65525553_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_32314.known	chr11	+	2636	18	FSM	ENSG00000142186.18	ENST00000270176.10	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_13	41.6216273299314	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-19	True	NA	28	True	AATAAA	-13	NA	65525082	65538704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_32315.known	chr11	+	2583	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_13	63.8618751709189	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-17	True	NA	28	True	AATAAA	-13	NA	65525084	65538704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_32316.known	chr11	+	2570	18	FSM	ENSG00000142186.18	ENST00000533862.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	96.2669299360272	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	10	True	NA	28	True	AATAAA	-13	NA	65525111	65538704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65538003_65538183_65538269_65538325_65538441
transcript_32317.known	chr11	+	2584	17	FSM	ENSG00000142186.18	ENST00000525364.5	2584	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	122.957817970229	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-25	True	NA	28	True	AATAAA	-13	NA	65525076	65538704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537811_65537881_65537966_65538183_65538441
transcript_32318.known	chr11	+	2715	17	FSM	ENSG00000142186.18	ENST00000524944.5	2715	17	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_13	42.0204098474777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	19	True	NA	28	True	AATAAA	-13	NA	65525120	65538704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269
transcript_32319.known	chr11	+	2586	17	FSM	ENSG00000142186.18	ENST00000527009.5	2586	17	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_12	42.7832016538033	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGCCACAATAAATTC	311	False	NA	-1	True	NA	NA	NA	65525412	65538675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_32320.known	chr11	+	769	4	FSM	ENSG00000173465.8	ENST00000309328.8	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	119.558446887797	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGAGTTGAGCTTGT	6	True	NA	NA	False	NA	NA	NA	65570476	65571888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65570511_65570603_65570756_65570885_65570971_65571390
transcript_32322.known	chr11	+	1251	2	FSM	ENSG00000176973.8	ENST00000530349.2	1251	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	-6	True	NA	12	True	AATAAA	-14	NA	65572537	65574190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65572961_65573362
transcript_32323.known	chr11	+	1409	2	FSM	ENSG00000176973.8	ENST00000316409.2	1409	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTGGCTCTGGGG	58	False	NA	20	True	AATAAA	-22	NA	65572348	65574198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65572961_65573401
transcript_32324.known	chr11	+	1337	2	FSM	ENSG00000176973.8	ENST00000449319.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	171	False	NA	12	True	AATAAA	-14	NA	65572461	65574190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65572961_65573352
transcript_32325.known	chr11	+	713	4	FSM	ENSG00000173465.8	ENST00000526877.1	713	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	394.719591046043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTCCACTCTGCTCT	16	True	NA	111	True	NA	NA	NA	65570486	65571858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65570511_65570603_65570740_65570885_65570971_65571390
transcript_32339.known	chr11	-	5605	1	FSM	ENSG00000173327.8	ENST00000527304.1	5605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGAAAAGA	-2	True	NA	NA	False	NA	NA	NA	65614236	65608631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65608600_65614200
transcript_32340.known	chr11	-	3543	10	FSM	ENSG00000173327.8	ENST00000309100.8	3543	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_5	19.9431290188307	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGCCTGTCACCTTTC	13	True	NA	-2	True	AATAAA	-20	NA	65614221	65597756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65598629_65599393_65599769_65605760_65605853_65605945_65606082_65606690_65606805_65607269_65607514_65607640_65607817_65607921_65608071_65608267_65608449_65613017
transcript_32341.known	chr11	-	1812	5	FSM	ENSG00000173327.8	ENST00000532507.5	1812	5	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	15.7003184681076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCTGTCACCTTTCT	9557	False	NA	-1	True	AATAAA	-21	NA	65607026	65597755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65598629_65599393_65599769_65605760_65605853_65605945_65606082_65606690
transcript_32350.known	chr11	+	3499	16	FSM	ENSG00000213445.10	ENST00000534313.6	3499	16	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	76.447338446512	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTGTGTCTGAACA	-18	True	NA	25	True	AGTAAA	-8	NA	65638100	65650912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65638183_65640830_65641601_65642249_65642378_65642462_65642640_65644954_65645130_65645853_65645958_65646220_65646379_65646455_65647066_65647383_65647659_65649261_65649481_65649560_65649673_65649756_65649866_65649949_65650052_65650137_65650193_65650400_65650480_65650568
transcript_3236.nic	chr1	+	2215	8	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	490	junction_1	105.196220930028	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	0	True	NA	31	True	AATAAA	-22	NA	12019439	12032045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12030125_12031265_12031404_12031721
transcript_32360.nic	chr11	-	2883	11	NIC	ENSG00000173039.20	novel	2517	11	NA	NA	-43	0	intron_retention	FALSE	canonical	0	0	junction_10	27.710828208482	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGAGATCCGCTTTTTTT	1025	False	NA	-13	True	AATAAA	-16	NA	65662836	65653601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662378
transcript_32361.known	chr11	-	2517	11	FSM	ENSG00000173039.20	ENST00000406246.8	2517	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	11.0833208019979	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	-2	True	NA	-12	True	AATAAA	-17	NA	65662916	65653600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_32369.known	chr11	-	2236	10	NNC	ENSG00000173039.20	novel	2266	12	NA	NA	0	2	intron_retention	TRUE	non_canonical	0	0	junction_2	29.8179662470651	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCGCTTTTTTTCAGCA	889	False	NA	-8	True	AATAAA	-21	NA	65662972	65653596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_65655001_65655687_65655705_65658488_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_32373.nic	chr11	-	2295	9	NIC	ENSG00000173039.20	novel	2004	12	NA	NA	-41	0	intron_retention	FALSE	canonical	2	2	junction_3	31.0513687298966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGAGATCCGCTTTTTTT	848	False	NA	-13	True	AATAAA	-16	NA	65663013	65653601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_65655001_65655687_65655763_65655854_65655936_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_32377.known	chr11	+	824	5	FSM	ENSG00000285533.3	ENST00000648185.2	909	5	83	2	8	-2	multi-exon	FALSE	canonical	2	3	junction_2	13.865424623862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	0	True	NA	12	True	AATAAA	-17	NA	65663085	65671716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130_65666218_65671422
transcript_32380.known	chr11	+	1697	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	10.9645894689324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGTTTCCATATT	-4	True	NA	NA	False	NA	NA	NA	65663005	65667304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
transcript_32387.known	chr11	+	2237	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_5	92.7274430695943	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	-23	True	NA	25	True	AATAAA	-17	NA	65711995	65719604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_32399.known	chr11	+	2059	13	FSM	ENSG00000172977.13	ENST00000352980.8	2059	13	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	53.1467439161506	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	-1	True	NA	25	True	AATAAA	-17	NA	65712017	65719604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_32405.known	chr11	+	2080	13	FSM	ENSG00000172977.13	ENST00000341318.9	2080	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	93.8516855942869	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	6	True	NA	25	True	AATAAA	-17	NA	65712251	65719604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_32418.known	chr11	+	1697	12	FSM	ENSG00000172977.13	ENST00000530446.5	1697	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	45.3648205347355	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTCCAAGGTCAGCTG	-7	True	NA	NA	False	NA	NA	NA	65712238	65719364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_32438.known	chr11	+	745	7	FSM	ENSG00000172977.13	ENST00000527544.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	56.1053077306912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTGAATCAAATGACAGC	178	False	NA	NA	False	NA	NA	NA	65712423	65714938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820
transcript_32440.known	chr11	+	576	7	FSM	ENSG00000172977.13	ENST00000534104.5	576	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	140.445323485294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATGAAGAACATTGAGTG	0	True	NA	NA	False	NA	NA	NA	65712245	65714584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712280_65712349_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494
transcript_32448.known	chr11	-	2085	5	FSM	ENSG00000172922.11	ENST00000531596.6	2085	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	156.160774524206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	11	True	NA	-41	True	NA	NA	NA	65720798	65717708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65719157_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_32451.known	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	39.9694327649962	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	11	True	NA	-5	True	AATAAA	-21	NA	65720798	65717672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
transcript_32454.known	chr11	-	835	3	FSM	ENSG00000172922.11	ENST00000527610.1	835	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	46	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATTCCATCACCCCAATAA	8	True	NA	-39	True	AGTAAA	-16	NA	65720801	65719720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65720165_65720241_65720418_65720586
transcript_32456.known	chr11	-	2798	3	FSM	ENSG00000172922.11	ENST00000528220.2	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	8.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-9	True	NA	-41	True	NA	NA	NA	65720818	65717708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65719810_65720044_65720165_65720241
transcript_32457.known	chr11	+	1875	11	FSM	ENSG00000172977.13	ENST00000534650.5	1875	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	38.9979486640003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGCAAAGTTCTTG	374	False	NA	24	True	AATAAA	-16	NA	65712619	65719603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_32460.known	chr11	-	6980	2	FSM	ENSG00000254470.3	ENST00000532090.3	6980	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTTTTTGTTTTTGGT	-18	True	NA	-12	True	AATAAA	-17	NA	65780976	65773897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65780343_65780441
transcript_32463.nnic	chr11	+	2803	5	NNC	ENSG00000172818.10	novel	2988	4	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.8423695919137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	NA	False	NA	24	True	ATTAAA	-14	NA	65787016	65797214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045_65796638_65796868
transcript_32464.known	chr11	+	2988	4	FSM	ENSG00000172818.10	ENST00000335987.8	2988	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	0.942809041582063	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	-4	True	NA	24	True	ATTAAA	-14	NA	65787062	65797214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045
transcript_32479.known	chr11	+	2364	16	FSM	ENSG00000172732.12	ENST00000308110.9	2364	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	26.2944016010168	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	-8	True	NA	27	True	AATAAA	-39	NA	65860432	65866439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865016_65865146_65865219_65865324_65865810_65865895_65865985
transcript_32480.known	chr11	+	1817	16	FSM	ENSG00000172732.12	ENST00000524647.5	1817	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	45.4615832935409	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAAGATTGAAAAC	48	False	NA	5	True	AATAAA	-26	NA	65860859	65866417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865114_65865146_65865219_65865324_65865810_65865895_65865985
transcript_32507.known	chr11	+	1681	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	2.38484800354236	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	3	True	NA	8	True	AATAAA	-20	NA	65833962	65853701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
transcript_32532.known	chr11	-	1813	12	FSM	ENSG00000172638.13	ENST00000531972.5	1813	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.5485422121517	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	781	False	NA	-33	True	TATAAA	-21	NA	65872811	65866440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65866713_65866844_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_32541.known	chr11	-	1934	11	FSM	ENSG00000172638.13	ENST00000307998.11	1934	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	23.4190093727297	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-32	True	NA	-33	True	TATAAA	-21	NA	65872800	65866440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_32550.known	chr11	-	1504	11	FSM	ENSG00000172638.13	ENST00000528176.5	1504	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	56.2086292307507	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAGTGGTTTTCAATCT	25	True	NA	-39	True	TATAAA	-15	NA	65872743	65866446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65866713_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_32572.known	chr11	-	860	4	FSM	ENSG00000172757.13	ENST00000524553.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5114.12481923023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTTTTAACAACAT	5	True	NA	-166	True	NA	NA	NA	65856964	65855053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856884
transcript_32573.known	chr11	-	962	4	FSM	ENSG00000172757.13	ENST00000527344.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	5109.4110771747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	5018	False	NA	-87	True	NA	NA	NA	65857033	65854974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856930
transcript_32574.known	chr11	-	1062	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	5050.01797576559	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCATGCTGCCAACTTC	9	True	NA	-121	True	NA	NA	NA	65857868	65855008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
transcript_32575.known	chr11	-	636	4	FSM	ENSG00000172757.13	ENST00000531413.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5114.12481923023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGGAGGGGCTGGGGGG	8400	False	NA	NA	False	NA	NA	NA	65859289	65855256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65859230
transcript_32580.known	chr11	-	1245	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	0	0	0	multi-exon	FALSE	canonical	3	10777	junction_2	68.3975308196299	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTGAGACGCCTTT	0	True	NA	-35	True	NA	NA	NA	65858180	65854672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
transcript_32581.known	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10925	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	9495	False	NA	-55	True	ATTAAA	-3	NA	65858194	65854831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65856243_65858096
transcript_32582.known	chr11	-	1261	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_5	220.660120748831	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCCTCGCTCCGGGG	4618	False	NA	-23	True	AATAAA	-18	NA	65888531	65883920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_32583.known	chr11	-	1361	10	FSM	ENSG00000172500.13	ENST00000357519.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_5	50.2725902787327	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTGTCTTGGTTTAT	1	True	NA	-1	True	NA	NA	NA	65888471	65883739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_32590.known	chr11	-	1010	9	FSM	ENSG00000172500.13	ENST00000533037.5	1010	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	250.498877242993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCGGCTGCCTCCTGCGC	-18	True	NA	-111	True	NA	NA	NA	65888490	65884008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65887599_65887727_65887933_65888133_65888333
transcript_32616.known	chr11	+	963	1	FSM	ENSG00000175602.4	ENST00000312579.4	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	787	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACGGCCTGGGCAGCGT	19	True	NA	10	True	AATAAA	-17	NA	65890672	65891635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65890700_65891600
transcript_32617.known	chr11	-	1702	4	FSM	ENSG00000175592.9	ENST00000312562.7	1702	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	8.65383665716478	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGACAGTCCTCTGGG	-2	True	NA	NA	False	GGGGCT	-30	NA	65900388	65892048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65893297_65894013_65894122_65896808_65897007_65900240
transcript_32618.known	chr11	-	1559	2	FSM	ENSG00000175573.7	ENST00000449692.3	1559	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-8	True	NA	-3	True	AATAAA	-38	NA	65919062	65916809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65918216_65918909
transcript_32619.known	chr11	-	1562	2	FSM	ENSG00000175573.7	ENST00000438576.3	1562	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-8	True	NA	-3	True	AATAAA	-38	NA	65919062	65916809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65918219_65918909
transcript_32620.known	chr11	-	1528	1	FSM	ENSG00000175573.7	ENST00000530188.1	1528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGAGTGTTTTTTA	9867	False	NA	-26	True	AATAAA	-15	NA	65918360	65916832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65916800_65918400
transcript_32621.known	chr11	+	695	7	FSM	ENSG00000175550.8	ENST00000525501.5	695	7	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_3	663.737251394623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAAGAGGACGAAGAAG	0	True	NA	NA	False	NA	NA	NA	65919273	65921401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65919544_65919779_65919853_65919947_65919998_65920415_65920463_65920568_65920663_65920883_65920973_65921329
transcript_32623.known	chr11	+	822	7	FSM	ENSG00000175550.8	ENST00000312515.7	822	7	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_6	202.406356948919	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGCAGGACGTCAT	-4	True	NA	30	True	AATAAA	-24	NA	65919425	65921563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_32627.known	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_5	216.785608378416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	7	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_3263.known	chr1	+	3760	15	FSM	ENSG00000120949.15	ENST00000263932.7	3760	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	9.05228576388419	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGACATGATCATCG	4	True	NA	27	True	CATAAA	-19	NA	12063302	12144207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12063662_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138228_12138437_12142286
transcript_32633.known	chr11	+	1925	8	FSM	ENSG00000175513.9	ENST00000532620.5	1925	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.86553896169326	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	NA	False	NA	12	True	ATTAAA	-12	NA	65945444	65959963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65945823_65946879_65947017_65947109_65947829_65948000_65948149_65953566_65953738_65958882_65958983_65959189_65959315_65959816
transcript_32648.known	chr11	+	3557	20	FSM	ENSG00000175467.15	ENST00000312397.10	3557	20	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_19	43.822482498133	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGGGTGAGGAAACTGT	1	True	NA	NA	False	AATAAA	-16	NA	65961733	65980137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65962094_65964073_65964132_65964514_65964571_65965091_65965219_65965341_65965448_65965701_65965780_65965886_65965987_65966075_65966219_65966349_65966557_65967258_65967384_65967470_65967587_65967678_65967822_65976394_65976569_65976655_65976767_65977013_65977102_65977562_65977654_65977763_65977900_65978599_65978690_65978792_65978915_65979011
transcript_3266.nnic	chr1	+	4030	15	NNC	ENSG00000120949.15	novel	3760	15	NA	NA	176	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	16.5443127906325	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGAGGACATGATCAT	38	False	NA	25	True	CATAAA	-17	NA	12063645	12144205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_12064277_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138228_12138437_12142286
transcript_3270.nnic	chr1	+	3810	14	NIC	ENSG00000120949.15	novel	3760	15	NA	NA	-106	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	18.4993203137576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGAGGACATGATCAT	30	False	NA	25	True	CATAAA	-17	NA	12063196	12144205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12063662_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12135587_12135614_12138228_12138437_12142286
transcript_32701.known	chr11	-	808	6	FSM	ENSG00000175376.9	ENST00000529964.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.1283361405006	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-18	True	NA	-9	True	ATTAAA	-16	NA	66002166	65998432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66002039
transcript_32702.known	chr11	-	889	6	FSM	ENSG00000175376.9	ENST00000527249.5	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	27.7012635090893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCCCTGGCTCTTCT	300	False	NA	NA	False	NA	NA	NA	66002176	65998566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66001909
transcript_32703.known	chr11	-	2761	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.1283361405006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-8	True	NA	-23	True	AATAAA	-19	NA	66002156	65996544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
transcript_32704.known	chr11	-	2916	6	FSM	ENSG00000175376.9	ENST00000533544.6	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	31.6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-9	True	NA	-23	True	AATAAA	-19	NA	66002157	65996544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66001909
transcript_32706.nic	chr11	-	1232	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	-284	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	32.3827114368146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	16	True	NA	-9	True	ATTAAA	-16	NA	66002460	65998432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_32713.known	chr11	+	946	3	FSM	ENSG00000175334.8	ENST00000445560.6	946	3	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	1676	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	-21	True	NA	27	True	AATAAA	-15	NA	66002227	66004146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66002514_66003234_66003374_66003625
transcript_32714.known	chr11	+	731	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	697.5	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	4	True	NA	30	True	AATAAA	-18	NA	66002502	66004149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66002571_66003234_66003374_66003625
transcript_32716.known	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	2044.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	82	False	NA	12	True	NA	NA	NA	66002580	66004131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66003071_66003234_66003374_66003625
transcript_32719.known	chr11	+	612	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	-19	True	NA	27	True	AATAAA	-15	NA	66002479	66004146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66002571_66003625
transcript_3272.known	chr1	+	2412	14	FSM	ENSG00000120949.15	ENST00000514649.5	2412	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.4050695638443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCACACTGTACTCTGC	21	False	NA	85	True	NA	NA	NA	12063469	12143117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12063662_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138231_12138437_12142286
transcript_32720.known	chr11	+	592	3	FSM	ENSG00000175315.3	ENST00000312134.3	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTTCCAAGTGCTT	11	True	NA	21	True	AATAAA	-22	NA	66012007	66013505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66012285_66012825_66012952_66013316
transcript_32723.nnic	chr11	-	2142	4	NNC	ENSG00000175229.7	novel	3301	3	NA	NA	-2	410	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	101.826650080746	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAGTTGTATGTCAGTCA	-12	True	NA	-3	True	AATAAA	-15	NA	66049163	66041953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_66043678_66043889_66043918_66045290_66045528_66049010
transcript_32724.nnic	chr11	-	2193	4	NNC	ENSG00000175229.7	novel	3301	3	NA	NA	-4	410	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	109.849391845785	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAGTTGTATGTCAGTCA	-14	True	NA	-3	True	AATAAA	-15	NA	66049165	66041953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_66043678_66045290_66045528_66046891_66046969_66049010
transcript_32726.known	chr11	-	3301	3	FSM	ENSG00000175229.7	ENST00000312006.5	3301	3	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	5	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGTGATCTATCCAAA	-10	True	NA	NA	False	AGTAAA	-14	NA	66049161	66040764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66043678_66045290_66045528_66049010
transcript_32728.known	chr11	+	841	8	FSM	ENSG00000087365.16	ENST00000524627.5	841	8	0	0	0	0	multi-exon	TRUE	canonical	3	286	junction_4	590.900281652618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTGCAGCTGAAGGAGA	1	True	NA	NA	False	NA	NA	NA	66052364	66058100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055537_66055586_66056837_66056956_66057265_66057376_66058053
transcript_32729.known	chr11	+	1163	10	FSM	ENSG00000087365.16	ENST00000530322.5	1163	10	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	572.972905657226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAAGGAGAGCACACTA	36	False	NA	NA	False	NA	NA	NA	66052399	66059044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057268_66057376_66058053_66058151_66058313_66058406_66058829
transcript_32730.known	chr11	+	4571	24	FSM	ENSG00000175115.13	ENST00000320580.9	4571	24	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_13	17.3230181123769	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGCTTCTATGCCC	-54	True	NA	31	True	AATAAA	-20	NA	66070271	66244744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66070843_66193485_66193574_66210361_66210452_66211133_66211260_66216118_66216264_66216519_66216612_66216694_66216776_66219745_66219806_66220630_66220792_66221153_66221248_66227503_66227585_66230547_66230664_66230804_66230941_66232171_66232277_66232959_66233067_66233784_66233940_66234131_66234243_66235300_66235404_66235897_66235941_66238803_66238847_66239141_66239278_66241426_66241654_66242911_66243032_66243164
transcript_32733.nic	chr11	+	2890	22	ISM	ENSG00000175115.13	ENST00000320580.9	4571	24	-20	3092	-20	104	5prime_fragment	FALSE	canonical	3	158	junction_13	17.9823546668694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTACCCCCAAGGCCG	98	False	NA	NA	False	AAGAAA	-12	NA	66070251	66241652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_66070843_66193485_66193574_66210361_66210452_66211133_66211260_66216118_66216264_66216519_66216612_66216694_66216776_66219745_66219806_66220630_66220792_66221153_66221248_66227503_66227585_66230547_66230664_66230804_66230941_66232171_66232277_66232959_66233067_66233784_66233940_66234131_66234243_66235300_66235404_66235897_66235941_66238803_66238847_66239141_66239278_66241426
transcript_32735.nic	chr11	+	1924	10	ISM	ENSG00000175115.13	ENST00000320580.9	4571	24	-20	23101	-20	0	5prime_fragment	FALSE	canonical	3	164	junction_5	20.8297033874675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	98	False	NA	NA	False	NA	NA	NA	66070251	66221643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_66070843_66193485_66193574_66210361_66210452_66211133_66211260_66216118_66216264_66216519_66216612_66216694_66216776_66219745_66219806_66220630_66220792_66221153
transcript_3274.nnic	chr1	+	3659	13	NIC	ENSG00000120949.15	novel	3760	15	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	18.9096903435484	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGAGGACATGATCAT	79	False	NA	25	True	CATAAA	-17	NA	12063245	12144205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12063662_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12135587_12135614_12138228_12138437_12142286
transcript_32740.known	chr11	+	612	2	FSM	ENSG00000175115.13	ENST00000534273.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	66220669	66221643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66220792_66221153
transcript_32744.known	chr11	+	3015	16	FSM	ENSG00000174996.12	ENST00000417856.5	3015	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	98.4633039371634	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTGTTTTGAGAC	13	True	NA	8	True	AATAAA	-16	NA	66257293	66267859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66257489_66258546_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
transcript_32749.known	chr11	+	2953	16	FSM	ENSG00000174996.12	ENST00000394067.7	2953	16	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	38.2369222378348	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTTTTGAGACG	-1	True	NA	9	True	AATAAA	-17	NA	66257702	66267860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66257872_66258583_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
transcript_32754.known	chr11	+	2990	16	FSM	ENSG00000174996.12	ENST00000316924.9	2990	16	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	79.9978888610332	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTTTTGAGACG	-1	True	NA	9	True	AATAAA	-17	NA	66257702	66267860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66257872_66258546_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
transcript_32786.known	chr11	+	2591	14	FSM	ENSG00000174996.12	ENST00000394066.6	2591	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104.478530395529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTGTTTTGAGAC	68	False	NA	8	True	AATAAA	-16	NA	66258544	66267859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66258823_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
transcript_32802.known	chr11	-	1097	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_3	97.9339635902162	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-5	True	NA	-7	True	NA	NA	NA	66289143	66284579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_3282.known	chr1	+	3687	10	FSM	ENSG00000028137.19	ENST00000376259.7	3687	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	3.18948890986829	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCGACCCCTGGCTCTG	1	True	NA	3	True	AATAAA	-14	NA	12166990	12209220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12167170_12188795_12188896_12190956_12191086_12191773_12191924_12192430_12192525_12192862_12193099_12193954_12194033_12194583_12194619_12201966_12202172_12206739
transcript_32823.known	chr11	-	943	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	460.819921444375	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-7	True	NA	-7	True	NA	NA	NA	66289145	66284579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_32824.known	chr11	+	1901	6	FSM	ENSG00000174903.16	ENST00000311481.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	77.0750283814414	5383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTGGCCAAGTGTGG	6	True	NA	31	True	AATAAA	-43	NA	66268638	66277492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66272364_66272461_66275803_66275936_66276043
transcript_3283.known	chr1	+	3583	9	FSM	ENSG00000028137.19	ENST00000492361.1	3583	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.05431868505671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTCTGCCTGGGGT	13	False	NA	11	True	AATAAA	-22	NA	12167002	12209228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12167170_12190956_12191086_12191773_12191924_12192430_12192525_12192862_12193099_12193954_12194033_12194583_12194619_12201966_12202172_12206739
transcript_32842.known	chr11	+	991	5	FSM	ENSG00000174903.16	ENST00000527397.1	991	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	448.347730561893	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTACTGCCCTGGCTG	-3	True	NA	NA	False	NA	NA	NA	66268589	66276629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66275803_66275936_66276043
transcript_32850.known	chr11	-	1042	4	FSM	ENSG00000174851.16	ENST00000376899.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_1	50.8614676242132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGCTTGTCCTCCAAG	-5	True	NA	NA	False	NA	NA	NA	66289143	66287140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66287677_66287811_66287917_66288080_66288293_66288954
transcript_32852.known	chr11	+	2538	2	FSM	ENSG00000179292.5	ENST00000327259.5	2538	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTGCATTCCTGGGTC	-1	True	NA	4	True	AATAAA	-15	NA	66291893	66296664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66292089_66294321
transcript_32853.known	chr11	-	2551	1	FSM	ENSG00000174807.4	ENST00000311330.4	2551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTTCTGACCCCCA	0	True	NA	-7	True	AATAAA	-17	NA	66317044	66314493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66314500_66317000
transcript_32858.known	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	117.86055791108	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-12	True	NA	-6	True	ATTAAA	-20	NA	66345119	66337332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_32861.known	chr11	-	1424	10	FSM	ENSG00000174744.14	ENST00000359957.8	1424	10	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	25.7499850173755	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	3	True	NA	-12	True	ATTAAA	-14	NA	66345104	66337338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337890_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_32865.known	chr11	-	1817	9	FSM	ENSG00000174744.14	ENST00000530238.5	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	27.1773688020014	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGACTGGAATTAAAACC	18	True	NA	-42	True	NA	NA	NA	66345089	66337368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337890_66338242_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_32866.known	chr11	-	913	9	FSM	ENSG00000174744.14	ENST00000527375.5	913	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	166.043480751278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCAGGCTCCTGTGG	-5	True	NA	NA	False	NA	NA	NA	66345079	66337777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337890_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341212_66341334_66341532_66341624_66342095_66342242_66344971
transcript_3287.known	chr1	-	2201	6	FSM	ENSG00000162496.9	ENST00000616661.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	30.4893424002552	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	5	True	NA	-4	True	AATAAA	-19	NA	12618210	12567909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
transcript_32880.known	chr11	-	2007	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCCGTTACTCTC	-12	True	NA	-3	True	AATAAA	-17	NA	66347629	66345373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66346241_66346489
transcript_32885.known	chr11	-	2505	13	FSM	ENSG00000174669.12	ENST00000544554.5	2505	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	55.3099222563185	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	-10	True	NA	-35	True	NA	NA	NA	66372174	66362521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562_66371647_66372009
transcript_32907.known	chr11	+	286	2	FSM	ENSG00000255468.7	ENST00000581155.5	286	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTGTGCTGACT	110	False	NA	NA	False	NA	NA	NA	66347949	66353619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66348071_66353454
transcript_32908.known	chr11	-	2474	12	FSM	ENSG00000174669.12	ENST00000540386.5	2474	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	48.5669002681136	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	640	False	NA	-35	True	NA	NA	NA	66371820	66362521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366192_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_32909.known	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_9	33.3664848920228	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	5	True	NA	-34	True	NA	NA	NA	66371760	66362520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_32910.known	chr11	-	2272	12	FSM	ENSG00000174669.12	ENST00000541567.5	2272	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	56.1787289530197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGCGTTCACCAAGTC	813	False	66371669	-36	True	NA	NA	NA	66371647	66362522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369132_66369368_66369533_66371243_66371326_66371562
transcript_32918.known	chr11	+	637	2	FSM	ENSG00000254510.3	ENST00000689212.1	2199	2	1462	100	1452	6	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGCCATCACCTCTTC	1489	False	NA	9	True	AATAAA	-23	NA	66410671	66417127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66410974_66416792
transcript_3292.known	chr1	+	2027	4	FSM	ENSG00000204518.3	ENST00000376221.2	2027	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCGTCAGTGGTGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	12644084	12667076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12644715_12651122_12651340_12661790_12661855_12665960
transcript_32925.known	chr11	+	2676	18	FSM	ENSG00000254986.8	ENST00000541961.5	2676	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	114.487151936265	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	0	True	NA	19	True	AATAAA	-19	NA	66480430	66509657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66480466_66482179_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_3293.known	chr1	+	4055	4	FSM	ENSG00000188984.12	ENST00000359318.8	4055	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCACATCAATGGACTC	-4	True	NA	7	True	AATAAA	-17	NA	12716109	12728760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12716345_12719474_12719692_12720882_12720947_12725221
transcript_32934.known	chr11	+	3078	18	FSM	ENSG00000254986.8	ENST00000532677.5	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	76.5536652801162	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	-7	True	NA	19	True	AATAAA	-19	NA	66480012	66509657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66480466_66482195_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_3295.known	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	203.912334104634	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	-10	True	NA	13	True	AATAAA	-19	NA	13583761	13617957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
transcript_32958.known	chr11	+	2251	17	FSM	ENSG00000254986.8	ENST00000530165.5	2251	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	134.442308723854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGCTTGGACCTTGGT	7	True	NA	NA	False	GGGGCT	-15	NA	66480437	66509345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66480466_66482195_66482471_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_32969.known	chr11	+	3368	17	FSM	ENSG00000174483.20	ENST00000318312.12	3368	17	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	13.0202666543355	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTTAATGGAGTTA	-11	True	NA	6	True	ATTAAA	-15	NA	66510634	66533598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
transcript_32984.known	chr11	+	1934	16	FSM	ENSG00000174483.20	ENST00000630659.2	1934	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	31.4003538550479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCGGCTCAACTCCTCCC	9	True	NA	NA	False	NA	NA	NA	66510654	66532219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66510707_66511012_66511090_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
transcript_3299.known	chr1	+	2737	6	FSM	ENSG00000162493.17	ENST00000621990.5	2737	6	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_5	190.777986151443	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	60	True	NA	13	True	AATAAA	-19	NA	13583831	13617957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_33.known	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00092_+_0_1100
transcript_33006.known	chr11	+	2704	8	FSM	ENSG00000174516.15	ENST00000320740.12	2704	8	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_2	11.8425038720358	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGGCTCTGCTTCTTGG	-5	True	NA	18	True	NA	NA	NA	66466904	66477337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66467028_66468127_66468281_66468832_66468905_66471241_66471372_66472368_66472471_66473240_66473436_66473736_66473926_66475597
transcript_33012.known	chr11	+	1671	7	FSM	ENSG00000174516.15	ENST00000524466.5	1671	7	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_2	12.7725834852973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAAGCCTACTCTTCTTG	14	True	NA	NA	False	AAAACA	-16	NA	66466923	66474651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66467028_66468127_66468281_66468832_66468905_66471241_66471372_66472368_66472471_66473240_66473436_66473736
transcript_33014.known	chr11	+	2783	7	FSM	ENSG00000174516.15	ENST00000349459.10	2783	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	14.6600363801277	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCAGACACCGGGCTCT	511	False	NA	9	True	NA	NA	NA	66466744	66477328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66467028_66468127_66468281_66471241_66471372_66472368_66472471_66473240_66473436_66473736_66473926_66475597
transcript_33019.known	chr11	+	964	6	FSM	ENSG00000174516.15	ENST00000526296.5	964	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	20.283983829613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACGTCCATGGCTACCA	16	True	NA	NA	False	NA	NA	NA	66466925	66475843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66467028_66471241_66471372_66472368_66472471_66473240_66473436_66473736_66473926_66475597
transcript_33020.known	chr11	-	922	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	677.61995248074	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-13	True	NA	-10	True	AATAAA	-13	NA	66438834	66435837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
transcript_33025.known	chr11	-	812	5	FSM	ENSG00000174547.13	ENST00000534488.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	637.909280383974	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-5	True	NA	-10	True	AATAAA	-13	NA	66438826	66435837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437436_66438163_66438260_66438631
transcript_33026.known	chr11	-	1527	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_4	471.301654993912	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGACTTCTGCCAATAT	-27	True	NA	-18	True	AATAAA	-25	NA	66438848	66435074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
transcript_33028.known	chr11	-	2209	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	650.941817676511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGAGACTTCTGCC	1052	False	NA	-23	True	AATAAA	-20	NA	66466738	66435079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
transcript_33029.known	chr11	-	1615	5	FSM	ENSG00000174165.8	ENST00000534073.5	1615	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	59.0354766221126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTACCTCAATATGATGG	12	True	NA	-16	True	AATAAA	-3	NA	66546036	66520636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66521467_66524154_66524277_66526935_66527007_66543703_66543982_66545722
transcript_33030.known	chr11	-	828	4	FSM	ENSG00000255517.7	ENST00000527092.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.7540843131393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCCTTGCCTCACAG	13	True	NA	NA	False	NA	NA	NA	66480231	66473489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66473868_66474143_66474226_66474929_66475105_66480038
transcript_33038.known	chr11	-	4803	3	FSM	ENSG00000174165.8	ENST00000310442.5	4803	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	8.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGCCTTTTTAAATTG	0	True	NA	NA	False	AATAAA	-23	NA	66546048	66535625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66539825_66543703_66543982_66545722
transcript_33043.known	chr11	-	944	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTCTGGAGAGTGC	13	True	NA	NA	False	ATTAAA	-24	NA	66480231	66477345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66478097_66480038
transcript_33051.known	chr11	+	2882	21	FSM	ENSG00000248746.6	ENST00000513398.2	2882	21	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_11	34.7273307353157	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	-2	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_33057.nic	chr11	+	4047	20	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	-76	0	intron_retention	FALSE	canonical	3	277	junction_11	34.3468538761723	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	9541	False	NA	12	True	AATAAA	-25	NA	66546318	66563334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_33068.nic	chr11	+	3983	19	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	-47	0	intron_retention	FALSE	canonical	3	277	junction_10	32.739949923414	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	NA	False	NA	12	True	AATAAA	-25	NA	66546855	66563334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557930_66558026_66558175_66559235_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_33090.nnic	chr11	-	1922	14	NNC	ENSG00000174080.12	novel	2044	13	NA	NA	-7740	0	intron_retention	FALSE	canonical	2	7	junction_12	5.71927086013573	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTGTGGTATAAATGCTC	NA	False	NA	-2	True	AATAAA	-16	NA	66576619	66563466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66576003_66576120_66576521
transcript_33091.known	chr11	-	1709	13	FSM	ENSG00000174080.12	ENST00000524994.6	1709	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	6.72061505121865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGGGCACAGCCCCT	-3	True	NA	NA	False	NA	NA	NA	66568606	66563795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566402_66567245_66567322_66567443_66567663_66567983_66568083_66568273
transcript_33094.known	chr11	-	2451	12	FSM	ENSG00000174080.12	ENST00000678294.1	2451	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	5.88175495258975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTATAAATGCTCAGT	1	True	NA	1	True	AATAAA	-19	NA	66568602	66563463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66564008_66564087_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568273
transcript_33095.known	chr11	-	2446	11	FSM	ENSG00000174080.12	ENST00000677365.1	2446	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.06712452484701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATAAAGAGGTGTCCTT	11	True	NA	-26	True	NA	NA	NA	66568545	66563490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66564008_66564087_66564649_66564741_66564807_66564886_66565007_66565670_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568273
transcript_33096.known	chr11	-	2888	1	FSM	ENSG00000182791.5	ENST00000333861.5	2888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAGACCTTGGAGTTA	-10	True	NA	-6	True	AATACA	-23	NA	66593063	66590175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66590200_66593100
transcript_33099.known	chr11	+	1214	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	79.8925298543651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	-2	True	NA	21	True	NA	NA	NA	66593200	66605998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_3310.known	chr1	+	2688	8	FSM	ENSG00000116731.23	ENST00000376048.9	2688	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	8.67555797182227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGAGGAACAAGCCTGG	7	False	NA	NA	False	AATAAA	-14	NA	13700239	13825065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13700301_13715540_13715615_13730999_13731118_13732778_13732883_13742004_13742158_13749360_13749488_13816426_13816571_13823158
transcript_33100.known	chr11	+	1066	8	FSM	ENSG00000173992.9	ENST00000533244.6	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	29.4465964215956	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	2	True	NA	42	True	AATGAA	-21	NA	66593184	66606019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_33103.known	chr11	+	1196	7	FSM	ENSG00000173992.9	ENST00000530384.5	1196	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	26.0362994469047	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCAGAGGGACTTT	NA	False	NA	-65	True	NA	NA	NA	66593152	66605912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_33112.nic	chr11	+	2370	6	NIC	ENSG00000173992.9	novel	1066	8	NA	NA	-215	0	intron_retention	FALSE	canonical	3	204	junction_3	20.0858158908221	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	NA	False	NA	42	True	AATGAA	-21	NA	66592937	66606019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66593301_66593641_66593715_66599115_66600550_66605338_66605417_66605488_66605593_66605701
transcript_33115.known	chr11	+	872	3	FSM	ENSG00000173992.9	ENST00000526066.5	872	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	13.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGGGTTTGAGTCAA	7	True	NA	NA	False	NA	NA	NA	66593189	66599803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115
transcript_33159.known	chr11	+	1763	4	FSM	ENSG00000173933.21	ENST00000408993.6	1763	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	179.611308725877	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTCAACTTAGGGT	5	True	NA	0	True	NA	NA	NA	66638671	66646452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638894_66639699_66640124_66643449_66644141_66646026
transcript_33161.known	chr11	-	1806	4	FSM	ENSG00000173914.12	ENST00000310046.9	1806	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	52.4933858267454	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTATGTTTGTCTT	-44	True	NA	-4	True	AATAAA	-18	NA	66677887	66664997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66665579_66668614_66669292_66676667_66677092_66677763
transcript_33163.known	chr11	+	1426	3	FSM	ENSG00000239306.5	ENST00000393979.3	1426	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	179	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	2	True	NA	25	True	AATAAA	-27	NA	66616625	66627343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66624213_66624325_66626460
transcript_33166.known	chr11	+	5367	3	FSM	ENSG00000239306.5	ENST00000310137.5	5367	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_2	4.5	3695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTGGTGGCATGCA	6	True	NA	NA	False	AAGAAA	-13	NA	66616629	66629934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66624213_66625679_66626460
transcript_33167.known	chr11	+	2034	3	FSM	ENSG00000248643.5	ENST00000421355.1	2034	3	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	180.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCCCAGTTACTAAGAAGA	7	True	NA	NA	False	GATAAA	-36	NA	66616630	66644632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66639699_66640124_66643449
transcript_33172.known	chr11	+	876	3	FSM	ENSG00000239306.5	ENST00000409372.1	876	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTCCGTGTCACTGGG	6	True	NA	NA	False	NA	NA	NA	66616629	66624593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66623900_66623969_66624213
transcript_33173.known	chr11	+	1566	3	FSM	ENSG00000248643.5	ENST00000412278.2	1566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	240.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGTGCTTTGCGAGA	2	True	NA	17	True	AATAAA	-17	NA	66616625	66646469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66643449_66644141_66646026
transcript_33176.known	chr11	+	1011	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	58.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	24	False	NA	-13	True	NA	NA	NA	66638719	66646439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638894_66639699_66640124_66646026
transcript_33182.known	chr11	+	829	2	FSM	ENSG00000248643.5	ENST00000500635.2	829	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	46	False	NA	15	True	AATAAA	-15	NA	66616669	66646467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66646026
transcript_33183.known	chr11	-	1646	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAATAATGGGAGAA	-34	True	NA	34	True	ATTAAA	-15	NA	66677877	66675559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66677092_66677763
transcript_33187.known	chr11	+	1607	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	75.2964511484808	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	7	True	NA	16	True	AATAAA	-16	NA	66638702	66646468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
transcript_33188.known	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	257.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	0	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66665855
transcript_33189.known	chr11	+	921	3	FSM	ENSG00000173933.21	ENST00000398692.8	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	200.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	2	True	NA	16	True	AATAAA	-16	NA	66638697	66646468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66646026
transcript_3319.nnic	chr1	+	601	5	NIC	ENSG00000116731.23	novel	628	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	8.4372685153431	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTCCCCCAAGAGCCGG	-16	True	NA	NA	False	NA	NA	NA	13700177	13749463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_13700301_13730999_13731118_13732778_13732883_13742004_13742158_13749360
transcript_33190.known	chr11	+	654	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	286.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	22	False	NA	3	True	AATAAA	-18	NA	66638717	66649930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66649735
transcript_33191.known	chr11	+	1548	2	FSM	ENSG00000173933.21	ENST00000483858.5	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATTTCCGTGACTCC	2	True	NA	17	True	AATAAA	-27	NA	66638697	66641192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699
transcript_33192.known	chr11	-	7446	36	FSM	ENSG00000173898.15	ENST00000617502.5	7446	36	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_35	44.5767396103137	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGGCAAGGTCCCAGGC	9587	False	NA	NA	False	NA	NA	NA	66718872	66685870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66686105_66686397_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66718442
transcript_33201.known	chr11	+	1948	17	FSM	ENSG00000173715.18	ENST00000532565.6	1948	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	113.192020892596	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGTTTAATAAAGCTGC	31	False	NA	-5	True	NA	NA	NA	66744891	66843290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788274_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804185_66813855_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_33202.nic	chr11	+	2178	17	NIC	ENSG00000173715.18	novel	2135	17	NA	NA	-47	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	111.411890635605	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	NA	False	NA	29	True	AATAAA	-20	NA	66744688	66843324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
transcript_3321.known	chr1	+	6175	4	FSM	ENSG00000116731.23	ENST00000413440.5	6175	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGGACTGCATTT	17	False	NA	7	True	AATAAA	-15	NA	13749402	13788079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13749488_13773077_13773189_13778417_13782832_13786514
transcript_33214.known	chr11	+	1734	16	FSM	ENSG00000173715.18	ENST00000642265.1	1734	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	113.7271588789	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCCCTTCCGCAAG	29	False	NA	-61	True	NA	NA	NA	66744889	66843234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66748378_66748518_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_33215.nic	chr11	+	2025	16	NIC	ENSG00000173715.18	novel	1734	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	111.495570415251	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	NA	False	NA	29	True	AATAAA	-20	NA	66744688	66843324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66744920_66748378_66748518_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
transcript_3322.known	chr1	+	628	6	FSM	ENSG00000116731.23	ENST00000484063.6	628	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.3666177907063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTCCCCCAAGAGCCGG	4	True	NA	NA	False	NA	NA	NA	13700197	13749463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13700301_13715540_13715615_13730999_13731118_13732778_13732856_13742004_13742158_13749360
transcript_3323.nnic	chr1	+	2102	8	NNC	ENSG00000189337.17	novel	6874	17	NA	NA	79520	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.4985186915606	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	TTTAAA	-45	NA	14678236	15066560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_14678536_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15060303_15063571_15063623_15065629
transcript_33230.nnic	chr11	+	1965	16	NIC	ENSG00000173715.18	novel	2135	17	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	115.190547451699	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	11	True	NA	29	True	AATAAA	-20	NA	66744762	66843324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66744920_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
transcript_33247.nic	chr11	+	1884	15	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	99.1682758687248	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	NA	False	NA	29	True	AATAAA	-20	NA	66744693	66843324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_33248.known	chr11	+	1998	15	FSM	ENSG00000173715.18	ENST00000540737.7	1998	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	101.272213486671	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTCGGCGGCGCTGGGC	17	True	NA	NA	False	NA	NA	NA	66744768	66843516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
transcript_3325.known	chr1	+	1843	4	FSM	ENSG00000171729.14	ENST00000376014.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.1154629969146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTACACTTAACTAGT	0	True	NA	NA	False	NA	NA	NA	15152565	15220339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15152785_15210489_15210563_15214894_15215432_15219325
transcript_33270.known	chr11	+	1666	14	FSM	ENSG00000173715.18	ENST00000527634.5	1666	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	89.8285678257932	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGTTTAATAAAGCTGC	19	True	NA	-5	True	NA	NA	NA	66744770	66843290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804185_66813855_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_33271.nic	chr11	+	1771	14	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	92.5039580154315	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	NA	False	NA	29	True	AATAAA	-20	NA	66744693	66843324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66744920_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
transcript_3330.known	chr1	+	1861	4	FSM	ENSG00000171729.14	ENST00000434578.6	1861	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.4560308258262	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGAAAACTGTA	27	True	NA	-74	True	NA	NA	NA	15153767	15220393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15153955_15210489_15210563_15214894_15215432_15219329
transcript_33301.known	chr11	+	1379	7	FSM	ENSG00000173653.8	ENST00000524506.5	1379	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	136.024099172005	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	-1	True	NA	29	True	ATTAAA	-21	NA	66843436	66846528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
transcript_33302.known	chr11	+	1428	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_2	108.365029376809	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	13	True	NA	33	True	ATTAAA	-25	NA	66843450	66846532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_33303.known	chr11	+	1270	7	FSM	ENSG00000173653.8	ENST00000525356.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	108.627293480455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	285	False	NA	29	True	ATTAAA	-21	NA	66843722	66846528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_33305.known	chr11	-	4305	23	FSM	ENSG00000173599.15	ENST00000393960.7	4305	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	24.5646810221303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGTAGTGAGAATGACCA	-1	True	NA	94	True	NA	NA	NA	66958383	66848419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66954248_66954437_66958321
transcript_33306.nic	chr11	-	4306	23	NIC	ENSG00000173599.15	novel	4351	24	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_22	23.8029531468765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGATCCTGTGCAGCCC	NA	False	NA	-6	True	AATAAA	-23	NA	66958415	66848519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66957739_66957997_66958321
transcript_33307.known	chr11	-	4248	23	FSM	ENSG00000173599.15	ENST00000529047.6	4248	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_21	25.7787791515707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTGAGAATGACCATCG	-1	True	NA	97	True	NA	NA	NA	66958383	66848416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66957868_66957997_66958321
transcript_33311.known	chr11	-	3877	22	FSM	ENSG00000173599.15	ENST00000528224.2	3877	22	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	19.7168160326945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGAAGTTTACTCAAT	-1	True	NA	-51	True	NA	NA	NA	66958383	66848564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851852_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_33312.known	chr11	-	4017	22	FSM	ENSG00000173599.15	ENST00000393958.7	4017	22	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	10.6215030259663	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGATCCTGTGCAGCCC	-1	True	NA	-6	True	AATAAA	-23	NA	66958383	66848519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_3332.known	chr1	+	766	3	FSM	ENSG00000171729.14	ENST00000451326.6	766	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGGCTGCCTCAAGGT	11	False	NA	NA	False	NA	NA	NA	15152576	15219346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15152785_15214894_15215432_15219325
transcript_33333.nnic	chr11	-	1863	12	NNC	ENSG00000173599.15	novel	1702	12	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	27.0851122535079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCAGCCCCTGCCTCG	-4	True	NA	-7	True	AATAAA	-19	NA	66958386	66860424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_66860816_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_33334.known	chr11	-	1702	12	FSM	ENSG00000173599.15	ENST00000524491.6	1702	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.2691095338704	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGCTGCAGCCCCTG	6	True	NA	-12	True	AATAAA	-14	NA	66958376	66860429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66860670_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_33339.nic	chr11	-	2176	11	ISM	ENSG00000173599.15	ENST00000524491.6	1702	12	-7	2637	0	-2619	5prime_fragment	FALSE	canonical	3	74	junction_3	9.05593727893474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCTCCCAGATAATTC	-1	True	NA	NA	False	NA	NA	NA	66958383	66863066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_33343.nic	chr11	+	2519	3	NIC	ENSG00000173621.9	novel	2869	2	NA	NA	-103	0	intron_retention	FALSE	canonical	0	0	junction_1	90.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTCTCTGGTGTTGT	NA	False	NA	18	True	AATAAA	-19	NA	66856543	66860475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66856865_66857734_66859094_66859636
transcript_33344.nnic	chr11	+	2653	3	NNC	ENSG00000173621.9	novel	2869	2	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_1	85.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTCTCTGGTGTTGT	-25	True	NA	18	True	AATAAA	-19	NA	66857063	66860475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_66857297_66857512_66859094_66859636
transcript_33345.nic	chr11	+	2429	3	NIC	ENSG00000173621.9	novel	1550	3	NA	NA	2	0	intron_retention	FALSE	canonical	3	39	junction_1	71	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTCTCTGGTGTTGT	-23	True	NA	18	True	AATAAA	-19	NA	66857065	66860475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66857297_66857734_66859094_66859636
transcript_33346.known	chr11	+	2869	2	FSM	ENSG00000173621.9	ENST00000309602.5	2869	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTCTCTGGTGTTGT	-25	True	NA	18	True	AATAAA	-19	NA	66857063	66860475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66859094_66859636
transcript_33347.known	chr11	+	1187	2	FSM	ENSG00000173237.5	ENST00000308963.4	1187	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACGATTTGCCTGGTGA	0	True	NA	NA	False	AATAAA	-15	NA	66975276	66977004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66975639_66976179
transcript_33348.known	chr11	+	1168	2	FSM	ENSG00000173237.5	ENST00000683896.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTGCCTGGTGACTAAC	-2	True	NA	NA	False	AATAAA	-20	NA	66975303	66977009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66975639_66976176
transcript_33349.known	chr11	+	4534	11	FSM	ENSG00000173227.14	ENST00000393946.6	4534	11	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	5.07937003968012	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGACTCAGGCCTCCTA	NA	False	NA	29	True	NA	NA	NA	67006777	67050863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67007456_67009878_67010123_67010822_67010995_67021868_67021914_67030121_67030179_67034644_67034839_67039810_67040204_67043637_67043854_67044592_67044714_67045743_67045878_67048583
transcript_33353.known	chr11	+	3722	8	FSM	ENSG00000173227.14	ENST00000527043.6	3722	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.42104741743151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGACTCAGGCCTCCTA	20	True	NA	29	True	NA	NA	NA	67023133	67050863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67023461_67030121_67030179_67034644_67034839_67039810_67040204_67043637_67043854_67044592_67044714_67045743_67045878_67048583
transcript_3336.known	chr1	+	1842	3	FSM	ENSG00000171729.14	ENST00000400796.7	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGAAATGTTCTTTTT	-8	True	NA	-59	True	AAAAAG	-15	NA	15153732	15220408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15153955_15214894_15215432_15219325
transcript_33361.known	chr11	+	1104	5	FSM	ENSG00000173156.7	ENST00000308831.7	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	6.59545297913646	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTCGTGCCTCTTT	-6	True	NA	13	True	AAGAAA	-15	NA	67056846	67072017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67057035_67065895_67065984_67066737_67066848_67070424_67070560_67071434
transcript_33363.known	chr11	+	538	3	FSM	ENSG00000173156.7	ENST00000532559.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCCGAACTCCACTGCAA	7	False	NA	NA	False	NA	NA	NA	67056888	67071691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67057035_67070424_67070560_67071434
transcript_33365.known	chr11	+	3651	10	FSM	ENSG00000173120.15	ENST00000530342.2	3651	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	22.294881215092	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGGAATTTCTTTTGGG	32	False	NA	39	True	AAAAAG	-11	NA	67240046	67256373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67240370_67243008_67243093_67245188_67245459_67245984_67246117_67248280_67248371_67250085_67250799_67252693_67252858_67253452_67253612_67254202_67254419_67254873
transcript_33371.known	chr11	+	463	3	FSM	ENSG00000173120.15	ENST00000517637.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAGAAGAAG	5	True	NA	NA	False	NA	NA	NA	67240300	67243816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67240370_67243008_67243093_67243506
transcript_33373.known	chr11	+	5671	16	FSM	ENSG00000173120.15	ENST00000526258.5	5671	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	29.244866596075	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTTTAAAGGGTTTGG	91	False	NA	2	True	AATAAA	-14	NA	67207601	67257661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67207689_67215339_67215447_67215855_67215950_67217755_67217885_67219287_67219404_67228036_67228164_67231565_67231961_67243008_67243093_67245188_67245459_67245984_67246117_67248280_67248371_67250085_67250799_67252693_67252858_67253452_67253612_67254202_67254419_67254873
transcript_33375.known	chr11	+	3403	21	FSM	ENSG00000173020.11	ENST00000308595.10	3403	21	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_17	37.9880244287591	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCTGTCTCAGACTCTT	14	True	NA	27	True	TATAAA	-14	NA	67266472	67286556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67266813_67277271_67277349_67279199_67279274_67279417_67279520_67279625_67279701_67279838_67279901_67280731_67280784_67281092_67281185_67281458_67281559_67281649_67281729_67281821_67281953_67282270_67282366_67282434_67282543_67282751_67282819_67283127_67283229_67283706_67283774_67283853_67283950_67284210_67284374_67284846_67284984_67285074_67285189_67285285
transcript_3338.known	chr1	-	3126	3	FSM	ENSG00000175147.13	ENST00000669314.1	3126	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTTCATCTCAAAAAAAA	2648	False	NA	NA	False	NA	NA	NA	15153618	15119407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15121060_15124227_15124374_15152290
transcript_33381.known	chr11	+	2219	16	FSM	ENSG00000172932.16	ENST00000308440.11	2219	16	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	36.2421485750132	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGCTCTGCTCACTGG	28	True	NA	5	True	AATAAA	-15	NA	67289347	67302483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67289828_67289966_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_33386.known	chr11	+	2128	15	FSM	ENSG00000172932.16	ENST00000511455.7	2128	15	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_7	29.3858913808123	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	-17	True	NA	6	True	AATAAA	-16	NA	67289302	67302484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_33395.nic	chr11	+	2536	14	NIC	ENSG00000172932.16	novel	2128	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_3	26.333994948371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	-20	True	NA	6	True	AATAAA	-16	NA	67289299	67302484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_33396.nnic	chr11	+	2064	14	NIC	ENSG00000172932.16	novel	2128	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_6	31.9924177407618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	-20	True	NA	6	True	AATAAA	-16	NA	67289299	67302484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_33398.known	chr11	+	2138	14	FSM	ENSG00000172932.16	ENST00000447274.7	2138	14	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_6	30.374194902521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTCTGCTCACTGGGC	-24	True	NA	7	True	AATAAA	-17	NA	67289401	67302485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67290077_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_33410.nic	chr11	+	1352	6	ISM	ENSG00000172932.16	ENST00000511455.7	2128	15	-3	9844	0	466	5prime_fragment	FALSE	canonical	3	53	junction_3	7.17216843081644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTATTGAGATATAATCT	-20	True	NA	NA	False	AAAACA	-6	NA	67289299	67292640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990
transcript_33412.known	chr11	+	1491	5	FSM	ENSG00000172932.16	ENST00000512101.5	1491	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	22.9605640174626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGTGAGAGCCTGCGAG	-20	True	NA	NA	False	NA	NA	NA	67289299	67291651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67290591_67291522_67291602
transcript_33415.nic	chr11	+	1549	2	ISM	ENSG00000172932.16	ENST00000512101.5	1491	5	0	276	0	-276	intron_retention	FALSE	canonical	3	57	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGAAGGGCTGGGC	-20	True	NA	NA	False	NA	NA	NA	67289299	67291375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_67289551_67290077
transcript_33417.nic	chr11	+	2966	14	NIC	ENSG00000172830.13	novel	2781	14	NA	NA	-64	0	intron_retention	TRUE	canonical	3	13	junction_1	24.5154220269561	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	NA	False	NA	11	True	AATAAA	-14	NA	67303413	67312592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67303692_67304048_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_33419.known	chr11	+	2781	14	FSM	ENSG00000172830.13	ENST00000308127.9	2781	14	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	10.7604359692589	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	-7	True	NA	11	True	AATAAA	-14	NA	67303529	67312592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_33420.known	chr11	+	2587	14	FSM	ENSG00000172830.13	ENST00000532881.5	2587	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	24.9116783050908	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	40	False	NA	11	True	AATAAA	-14	NA	67303625	67312592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310163_67310340_67311590
transcript_33431.nic	chr11	+	2694	13	NIC	ENSG00000172830.13	novel	2781	14	NA	NA	-50	0	intron_retention	FALSE	canonical	2	8	junction_6	26.4380828015615	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	NA	False	NA	11	True	AATAAA	-14	NA	67303427	67312592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_33468.known	chr11	+	1796	9	FSM	ENSG00000175463.12	ENST00000542590.2	1796	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.17586189819115	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGATGGCGCTGGAT	0	True	NA	7	True	AATAAA	-16	NA	67404082	67410089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67404355_67405084_67405185_67405398_67405507_67405594_67405702_67405902_67406018_67406626_67406693_67406826_67407017_67408978_67409134_67409406
transcript_33472.known	chr11	-	1465	7	FSM	ENSG00000172531.16	ENST00000532446.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	1	62	junction_6	1061.75411727742	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAAGCTGGATTCTCGC	13	True	NA	-26	True	AATAAA	-1	NA	67401577	67398200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401384
transcript_33473.known	chr11	-	1389	7	FSM	ENSG00000172531.16	ENST00000312989.11	1389	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	1071.50574219439	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	5558	False	NA	-8	True	AATAAA	-19	NA	67401793	67398182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401233_67401727
transcript_33475.known	chr11	-	1054	6	FSM	ENSG00000172531.16	ENST00000358239.8	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	1115.11889949009	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACATGGAGCCTTGGTG	-32	True	NA	-32	True	NA	NA	NA	67401871	67398430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401727
transcript_3348.known	chr1	+	2422	4	FSM	ENSG00000142634.13	ENST00000375980.9	2422	4	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_2	35.4902177445498	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATGGTTCTTGATG	-28	True	NA	20	True	GATAAA	-15	NA	15409887	15430339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15410280_15425870_15426019_15427149_15427285_15428592
transcript_33480.known	chr11	+	565	4	FSM	ENSG00000172613.8	ENST00000622583.4	565	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.35412613473634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTTCCTTAAAGGATCC	13	True	NA	NA	False	NA	NA	NA	67317870	67391434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67318198_67321269_67321334_67387534_67387672_67391397
transcript_33481.known	chr11	-	899	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	97.8241051865825	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	18	True	NA	-11	True	AATAAA	-18	NA	67353518	67351547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
transcript_33482.known	chr11	-	584	4	FSM	ENSG00000175482.9	ENST00000531239.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	91.2249965744039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCGCAGCTGAAGC	2	True	NA	NA	False	NA	NA	NA	67353534	67351808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353363
transcript_33483.known	chr11	-	1486	4	FSM	ENSG00000175482.9	ENST00000529704.5	1486	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	82.7405583737504	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGCTGGGCGCAGTGG	3396	False	NA	NA	False	AATAAA	-11	NA	67353579	67350776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353538
transcript_33485.known	chr11	+	912	3	FSM	ENSG00000172613.8	ENST00000621995.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTGAGTGCAGGTCGGC	25	False	NA	NA	False	NA	NA	NA	67376012	67392074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67376111_67387534_67387672_67391397
transcript_33489.known	chr11	-	1705	3	FSM	ENSG00000175505.11	ENST00000312438.8	1705	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTCTCTTTGCCCAGCC	-2	True	NA	-3	True	AATAAA	-16	NA	67373598	67364167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67365631_67367459_67367627_67373523
transcript_33490.known	chr11	-	967	3	FSM	ENSG00000175505.11	ENST00000533438.1	967	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTACCGAGCTGGGGAGG	-3	True	NA	NA	False	NA	NA	NA	67374177	67364961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67365631_67367459_67367627_67374046
transcript_33493.known	chr11	+	2086	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.3838604643302	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	2	True	NA	NA	False	ATTAAA	-18	NA	67391985	67398410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
transcript_33494.known	chr11	-	1677	6	FSM	ENSG00000172531.16	ENST00000679175.1	1677	6	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	288.100954528096	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAAGCTGGATTCTCGC	-14	True	NA	-26	True	AATAAA	-1	NA	67401604	67398200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067
transcript_33495.known	chr11	-	1809	6	FSM	ENSG00000172531.16	ENST00000677343.1	1809	6	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	298.269274314335	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGATTCTCGCCATG	-24	True	NA	-22	True	AATAAA	-5	NA	67401863	67398196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399666_67400688_67400920_67401067_67401200_67401727
transcript_33496.known	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	284.595277933809	6015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-19	True	NA	-8	True	AATAAA	-19	NA	67401858	67398182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_33497.known	chr11	-	1483	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	2805	junction_1	129.544741305852	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGTCAAAGCTGG	-24	True	NA	-34	True	NA	NA	NA	67401863	67398208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_33499.known	chr11	+	1806	16	FSM	ENSG00000175634.15	ENST00000528964.5	1806	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	159.902831605809	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCACGCCCCGCGCT	18	True	NA	-30	True	NA	NA	NA	67428503	67435344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432352_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_33520.known	chr11	+	1733	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.230671867716	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	8	True	NA	27	True	ATTAAA	-14	NA	67428493	67435401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_3355.nnic	chr1	+	2167	3	NIC	ENSG00000142634.13	novel	2422	4	NA	NA	-12	-132	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	252.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTGCTTCTTTTTTCC	-40	True	NA	19	True	TATAAA	-17	NA	15409875	15430207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15410280_15425870_15426019_15428592
transcript_3356.nnic	chr1	+	2292	3	NIC	ENSG00000142634.13	novel	2422	4	NA	NA	-15	-10	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	252.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCTTATGTGTGTATG	-43	True	NA	10	True	GATAAA	-5	NA	15409872	15430329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15410280_15425870_15426019_15428592
transcript_33584.known	chr11	-	1954	12	FSM	ENSG00000172725.14	ENST00000537042.5	1954	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	207.509075774834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATTCCAAATAAAATTC	-4	True	NA	-36	True	NA	NA	NA	67443456	67438081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67440701_67440837_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_33586.known	chr11	-	1931	12	FSM	ENSG00000172725.14	ENST00000393893.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	155.638540766421	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCTGCTGCTGCAA	-7	True	NA	-2	True	AATAAA	-19	NA	67443821	67438047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
transcript_33597.known	chr11	-	4411	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_6	48.3455271974564	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	5	True	NA	-2	True	AATAAA	-17	NA	67443476	67435509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_3360.known	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	25.8018289080445	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	10	True	NA	-4	True	AATAAA	-14	NA	15524215	15491400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
transcript_33600.known	chr11	-	4464	11	FSM	ENSG00000172725.14	ENST00000616321.4	4464	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	164.894178187103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-3	True	NA	-2	True	AATAAA	-17	NA	67443484	67435509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440485_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_33624.known	chr11	-	907	2	FSM	ENSG00000213402.3	ENST00000326294.4	907	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-3	True	NA	-2	True	AATAAA	-17	NA	67437682	67435509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67436351_67437616
transcript_33627.nic	chr11	-	934	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_5	236.772042268508	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	NA	False	NA	-9	True	AATAAA	-22	NA	67469304	67464352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467564_67468027_67468093_67469018
transcript_33628.known	chr11	-	3551	7	FSM	ENSG00000172663.9	ENST00000308022.7	3551	7	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_5	94.9789450352024	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTGACTTGACTT	-3	True	NA	NA	False	AATAAA	-44	NA	67469251	67461709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_33631.known	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	275.169442747959	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	9	True	NA	-9	True	AATAAA	-22	NA	67469239	67464352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_33634.nic	chr11	-	921	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	272.723761341032	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCAATTGCTCTCCT	NA	False	NA	-14	True	AATAAA	-17	NA	67469304	67464357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464662_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_33638.known	chr11	+	1186	6	FSM	ENSG00000110711.11	ENST00000683237.1	1186	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	89.0190990742998	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTCTGCTGAGCTGCT	30	False	NA	26	True	TATAAA	-19	NA	67483067	67491103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490450_67490787
transcript_33644.known	chr11	-	680	6	FSM	ENSG00000172663.9	ENST00000536020.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	357.860531492368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCTCCAGGACCCTCG	-20	True	NA	NA	False	NA	NA	NA	67469268	67464536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467564_67468016_67468093_67469018
transcript_33645.known	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	289.697083174822	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-2	True	NA	-48	True	NA	NA	NA	67469250	67464391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_3365.known	chr1	-	1621	5	FSM	ENSG00000132906.18	ENST00000348549.9	1621	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	46.8688329276503	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTATTTCTTCCCTC	9	True	NA	0	True	AATAAA	-23	NA	15524347	15492269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15518109_15518396_15524068
transcript_33650.nic	chr11	-	1062	6	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-32	0	intron_retention	FALSE	canonical	3	606	junction_4	101.57440622519	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCAATTGCTCTCCT	NA	False	NA	-14	True	AATAAA	-17	NA	67469304	67464357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_33655.known	chr11	+	1304	5	FSM	ENSG00000110711.11	ENST00000525341.2	1304	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	18.3081266108797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGGCCCTGCCTTAC	48	False	NA	-80	True	NA	NA	NA	67483181	67490997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315
transcript_33658.known	chr11	+	1030	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	95.2716510825754	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	3	True	NA	24	True	TATAAA	-17	NA	67483040	67491101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
transcript_3366.known	chr1	+	6034	15	FSM	ENSG00000116138.13	ENST00000375847.8	6034	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	11.1851304354103	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGGTAGCCCTTGCAT	-27	True	NA	23	True	AATAAA	-20	NA	15526847	15571733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15526959_15529087_15529273_15534236_15534304_15536474_15536815_15544398_15544584_15546766_15546872_15548269_15548429_15559525_15559657_15562141_15562326_15563928_15564112_15564282_15564360_15565918_15566000_15566081_15566181_15567098_15567270_15567777
transcript_33665.known	chr11	+	1919	4	FSM	ENSG00000110711.11	ENST00000529797.2	1919	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	20.9496751499609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAAGGCCTTTATTTA	95	False	NA	0	True	NA	NA	NA	67483228	67491077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67490215_67490315
transcript_33670.known	chr11	-	473	4	FSM	ENSG00000172663.9	ENST00000452789.6	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	299.560047773768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGGGGTCAAGAGGGGC	-24	True	NA	NA	False	GGGGCT	-17	NA	67469272	67467297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67467389_67467500_67467564_67468027_67468093_67469018
transcript_33671.known	chr11	-	1866	4	FSM	ENSG00000172663.9	ENST00000501408.6	1866	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	360.805580149014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGACAAGGTCTCACTAT	12	True	NA	NA	False	TTTAAA	-8	NA	67469236	67465906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67467389_67467500_67467591_67468016_67468093_67469018
transcript_33673.known	chr11	+	721	4	FSM	ENSG00000110711.11	ENST00000682659.1	721	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	103.964737611686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATTTATCTCTCTCT	21	True	NA	9	True	TATAAA	-2	NA	67483154	67491086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67490037_67490215_67490315_67490458_67490787
transcript_33679.nnic	chr11	-	4209	24	NNC	ENSG00000110697.13	novel	4217	24	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	68.2424234284475	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	3268	False	NA	-9	True	AATAAA	-17	NA	67505396	67491767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_67492297_67492933_67493063_67493409_67493553_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
transcript_33690.known	chr11	-	4216	24	FSM	ENSG00000110697.13	ENST00000436757.6	4216	24	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_10	58.5080092428178	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	-12	True	NA	-9	True	AATAAA	-17	NA	67505365	67491767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496346_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
transcript_33732.known	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	304.933872612845	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	3	True	NA	-57	True	NA	NA	NA	67508158	67506619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
transcript_33733.known	chr11	-	909	4	FSM	ENSG00000167797.8	ENST00000301488.8	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	49.3851079667635	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGCCTTTCTGGGTC	-1	True	NA	-12	True	AATAAA	-25	NA	67508162	67506496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67508000
transcript_33735.known	chr11	-	634	3	FSM	ENSG00000167797.8	ENST00000531506.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	45	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTGGAGGGTTGCTG	573	False	NA	NA	False	NA	NA	NA	67508091	67507052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67507498_67507591_67507690_67508000
transcript_33736.known	chr11	-	1692	3	FSM	ENSG00000167797.8	ENST00000525402.5	1692	3	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	12.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGTGCTCTCAGCTCT	15	True	NA	-27	True	AATAAA	-10	NA	67508649	67506511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67507013_67507364_67507498_67507591
transcript_33741.known	chr11	+	741	7	FSM	ENSG00000084207.18	ENST00000398606.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	7876	junction_1	2457.73450333613	12285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCACTGTGTTTCCT	-1	True	NA	47	True	AATAAA	-17	NA	67583811	67586653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_33748.known	chr11	+	706	6	FSM	ENSG00000084207.18	ENST00000398603.6	706	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	5822.21223934683	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	65	False	NA	50	True	AATAAA	-20	NA	67583741	67586656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586388
transcript_33753.known	chr11	+	471	6	FSM	ENSG00000084207.18	ENST00000646888.1	471	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5597.50376507243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTCAAGGCCTTCCT	14	False	NA	NA	False	NA	NA	NA	67583826	67586505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67583845_67584133_67584170_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_33773.known	chr11	+	1681	3	FSM	ENSG00000084207.18	ENST00000494593.1	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	7876	junction_1	2767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCACTGTGTTTCCT	9	True	NA	47	True	AATAAA	-17	NA	67583821	67586653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67583845_67584133_67585242_67586103
transcript_33777.known	chr11	+	723	5	FSM	ENSG00000084207.18	ENST00000498765.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6140.44519456855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGCCTTCCTTTCTC	333	False	NA	-2	True	NA	NA	NA	67584463	67586604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67584571_67584684_67584773_67585037_67585242_67586103_67586212_67586388
transcript_3379.known	chr1	-	3095	7	FSM	ENSG00000116771.6	ENST00000375826.4	3095	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	5.74456264653803	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTAATCTTAAAATAAC	-2	True	NA	-17	True	ATTAAA	-21	NA	15585051	15571698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15573725_15574756_15574842_15577684_15577865_15578858_15579055_15580093_15580143_15583192_15583396_15584695
transcript_33791.known	chr11	+	1560	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	0	0	0	0	multi-exon	TRUE	canonical	3	688	junction_1	43.305119019965	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTACCCTTTACCCA	5	True	NA	36	True	AATAAA	-41	NA	67606935	67612554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_33795.known	chr11	+	1503	10	FSM	ENSG00000167792.13	ENST00000529927.5	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	244.484693656063	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	9	True	NA	10	True	AATAAA	-15	NA	67606939	67612528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607050_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_33800.known	chr11	+	1512	10	FSM	ENSG00000167792.13	ENST00000415352.6	1512	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	247.291301210376	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCTGCTGTGACTGT	13	True	NA	17	True	AATAAA	-22	NA	67606943	67612535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607056_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_3383.known	chr1	+	10667	10	FSM	ENSG00000197312.12	ENST00000480945.6	10667	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	10.8832184782097	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTTGATCAATTTCT	4	True	NA	16	True	AATAAA	-16	NA	15617457	15669044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15617809_15626668_15626799_15630324_15630562_15633438_15633566_15638306_15638435_15643521_15643651_15649719_15649824_15651705_15651896_15656616_15656680_15659836
transcript_33838.known	chr11	-	745	4	FSM	ENSG00000167799.10	ENST00000376693.3	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4.18993502999218	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTGCTTCTGCTGTA	-15	True	NA	-1	True	AATAAA	-18	NA	67629937	67627937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67628252_67628322_67628401_67628918_67629052_67629717
transcript_33839.known	chr11	-	809	3	FSM	ENSG00000167799.10	ENST00000301490.8	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTGCTTCTGCTGTA	-8	True	NA	-1	True	AATAAA	-18	NA	67629930	67627937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67628401_67628918_67629052_67629717
transcript_33840.known	chr11	-	1371	8	FSM	ENSG00000132744.8	ENST00000255082.8	1371	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCATGGTTTGTGTCCTC	-19	True	NA	NA	False	TATAAA	-17	NA	67650730	67642554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67642940_67644759_67644870_67645044_67645153_67645286_67645381_67645691_67645888_67646807_67647064_67647515_67647590_67650582
transcript_33841.known	chr11	-	287	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGAATGTCAACAAT	23	False	NA	NA	False	NA	NA	NA	67683058	67682771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67682800_67683100
transcript_33847.nic	chr11	-	1977	5	NIC	ENSG00000160172.10	novel	1004	8	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	32.3882694814033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACACCCCTTAATCG	NA	False	NA	NA	False	AATAAA	-14	NA	67805369	67791783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67793294_67796683_67796834_67799373_67799476_67803001_67803065_67805217
transcript_33849.known	chr11	-	1857	4	FSM	ENSG00000160172.10	ENST00000529253.5	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	32.4995726467629	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGATGATCTGTGGCTA	NA	False	NA	NA	False	AATAAA	-31	NA	67805334	67791766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67793294_67796683_67796834_67803001_67803065_67805217
transcript_33855.known	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	22.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	NA	False	NA	NA	False	NA	NA	NA	67805322	67791647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67793294_67803001_67803065_67805217
transcript_33862.known	chr11	+	600	3	FSM	ENSG00000251637.6	ENST00000529069.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTGTGTTGCCTGAT	NA	False	NA	7	True	GATAAA	-14	NA	67886476	67894093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67886690_67888152_67888325_67893878
transcript_33864.known	chr11	-	776	4	FSM	ENSG00000254610.3	ENST00000527543.2	776	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	67955802	67934562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67934709_67936774_67936992_67939682_67939775_67955481
transcript_33868.known	chr11	-	2294	11	FSM	ENSG00000110057.8	ENST00000227471.7	2294	11	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_10	36.3578052142865	705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGAGTCCCAGGCCGCG	-9	True	NA	-1	True	AATAAA	-21	NA	68004097	67991099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67991858_67993675_67993795_67995610_67995885_67996601_67996785_67997674_67997800_67998358_67998453_67999172_67999306_67999518_67999681_68003021_68003176_68003656_68003799_68003947
transcript_3387.known	chr1	+	1443	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.2	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	-16	True	NA	12	True	AATAAA	-18	NA	15742498	15747982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
transcript_33884.known	chr11	+	2811	10	FSM	ENSG00000006534.17	ENST00000342456.11	2811	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.496903994999953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACATCTCAGTGATTT	17	True	NA	NA	False	AATAAA	-18	NA	68010326	68029276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68010393_68015296_68015460_68018526_68018638_68018772_68018894_68019169_68019256_68019714_68019797_68021484_68021872_68022594_68022762_68026008_68026109_68027748
transcript_33885.known	chr11	+	2078	9	FSM	ENSG00000006534.17	ENST00000617288.4	2078	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCTGGGACTGTTGCA	17	False	NA	NA	False	NA	NA	NA	68010366	68028694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68010393_68015296_68015460_68018772_68018894_68019169_68019256_68019714_68019797_68021484_68021872_68022594_68022762_68026008_68026109_68027748
transcript_33891.known	chr11	+	737	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	376.226623489383	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	-2	True	NA	25	True	AATAAA	-16	NA	68030680	68036644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_33892.known	chr11	+	814	7	FSM	ENSG00000110717.13	ENST00000526446.5	814	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	858.421160555172	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGGAGGCCGAGATC	1	True	NA	-82	True	NA	NA	NA	68030683	68036537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032524_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_33895.known	chr11	+	689	7	FSM	ENSG00000110717.13	ENST00000526339.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	862.505780979016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGTTGCTCAACAACG	60	False	NA	NA	False	NA	NA	NA	68030742	68036514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030878_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_33907.known	chr11	+	936	5	FSM	ENSG00000110717.13	ENST00000432321.6	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	437.655400972043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCAGCACGGGAACAAT	NA	False	NA	NA	False	NA	NA	NA	68030616	68033730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110
transcript_33916.known	chr11	+	3072	3	FSM	ENSG00000110717.13	ENST00000532399.1	3072	3	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	417.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAAAAAATACAAAAAAT	30	True	NA	NA	False	NA	NA	NA	68030712	68035278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285
transcript_33919.known	chr11	+	353	3	FSM	ENSG00000110717.13	ENST00000528492.1	353	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACGGCCTCTTGTCTTG	5	True	NA	20	True	AATAAA	-11	NA	68030687	68036639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68036252_68036382_68036461
transcript_33920.known	chr11	+	615	2	FSM	ENSG00000110717.13	ENST00000531796.1	615	2	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCGTCTGGGCTCCAATG	-30	True	NA	NA	False	NA	NA	NA	68030652	68032685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151
transcript_33923.nic	chr11	+	2866	21	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	40.4169209613993	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	15	False	NA	6	True	AATAAA	-18	NA	68038997	68050895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68039120_68039791_68039963_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_33930.known	chr11	+	2668	20	FSM	ENSG00000110719.10	ENST00000265686.8	2668	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	24.939705685264	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	-6	True	NA	6	True	AATAAA	-18	NA	68039024	68050895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_33957.nic	chr11	+	3047	19	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-40	0	intron_retention	TRUE	canonical	3	106	junction_6	17.8540032513374	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	2	True	NA	6	True	AATAAA	-18	NA	68038984	68050895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_33976.nic	chr11	+	3391	18	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-16	0	intron_retention	FALSE	canonical	3	106	junction_6	18.2597558888696	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	-22	True	NA	6	True	AATAAA	-18	NA	68039008	68050895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_34.known	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00095_+_0_500
transcript_34015.nnic	chr11	-	2602	13	NNC	ENSG00000110721.12	novel	2714	12	NA	NA	22	0	intron_retention	TRUE	canonical	0	0	junction_12	259.707674874827	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-2	True	NA	-14	True	AATAAA	-16	NA	68121422	68052858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68081403_68081458_68097018_68097131_68120827_68120965_68121110
transcript_34030.known	chr11	+	2457	15	FSM	ENSG00000110719.10	ENST00000532635.5	2457	15	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	19.9166631087578	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	177	False	NA	6	True	AATAAA	-18	NA	68042979	68050895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_34036.known	chr11	-	1599	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	108.976190060031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	40	True	NA	-4	True	AATAAA	-15	NA	68213595	68165718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_34037.known	chr11	-	2666	10	FSM	ENSG00000110066.15	ENST00000401547.6	2666	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_9	92.8595115692996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	18	True	NA	0	True	AATAAA	-19	NA	68213286	68165714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
transcript_34038.known	chr11	-	2869	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_9	55.8412653293265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	27	False	NA	0	True	AATAAA	-19	NA	68213828	68165714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_34042.known	chr11	-	638	2	FSM	ENSG00000110066.15	ENST00000466295.1	638	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAACCTGTATTTTTTTA	288	False	NA	NA	False	ACTAAA	-30	NA	68213567	68189605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68190153_68213476
transcript_34045.known	chr11	-	980	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	110.209743217195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-5	True	NA	NA	False	NA	NA	NA	68271947	68261608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
transcript_34049.nic	chr11	-	2304	4	NIC	ENSG00000171067.11	novel	2071	4	NA	NA	6	0	intron_retention	FALSE	canonical	3	43	junction_3	109.307923876644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	4	True	NA	-24	True	ATTAAA	-18	NA	68271995	68261337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68262919_68263691_68263867_68268053_68268252_68271645
transcript_34050.known	chr11	-	2071	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	14.6590889515307	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	26	False	68271999	-24	True	ATTAAA	-18	NA	68271973	68261337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
transcript_34052.known	chr11	-	941	4	FSM	ENSG00000171067.11	ENST00000530166.5	941	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	131.995791178692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCACTACCGCCACTGGG	-2	True	NA	NA	False	NA	NA	NA	68272001	68262462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68262919_68263572_68263715_68268053_68268252_68271856
transcript_34055.nic	chr11	-	2177	4	NIC	ENSG00000171067.11	novel	980	5	NA	NA	6	-2	intron_retention	FALSE	canonical	3	43	junction_3	109.307923876644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTTTGTAAATGAT	4	True	NA	-7	True	ACTAAA	-19	NA	68271995	68261464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68262919_68263691_68263867_68268053_68268252_68271645
transcript_34057.known	chr11	+	5177	23	FSM	ENSG00000162337.12	ENST00000294304.12	5177	23	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_5	13.8050924847462	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCATTCTTTCGTGCCCT	1	True	NA	21	True	TATAAA	-21	NA	68312590	68449275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68312806_68347846_68348244_68357649_68357848_68363746_68363944_68365570_68365703_68386315_68386713_68389880_68390053_68403482_68403700_68406523_68406814_68409913_68410141_68411435_68411621_68413688_68414013_68416327_68416528_68423488_68423698_68425101_68425293_68425977_68426188_68429574_68429701_68433601_68433839_68436888_68437000_68438445_68438683_68439776_68439917_68446435_68446534_68448808
transcript_34067.known	chr11	+	4292	24	FSM	ENSG00000110075.15	ENST00000524904.5	4292	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	150.083870692243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAATCAAACGTCTAA	9	True	NA	-4	True	NA	NA	NA	68460754	68614575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_34073.known	chr11	+	2771	23	FSM	ENSG00000110075.15	ENST00000524845.5	2771	23	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	112.209082070809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGACGTCTGCTGCTGC	3	True	NA	NA	False	NA	NA	NA	68460748	68613117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_34089.known	chr11	+	749	6	FSM	ENSG00000069482.7	ENST00000265643.4	749	6	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_3	213.011173415856	5019	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	1	True	NA	17	True	AATAAA	-13	NA	68684543	68691175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68684733_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_34090.known	chr11	-	2535	10	FSM	ENSG00000132749.11	ENST00000255087.10	2535	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	46.716639909613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-34	True	NA	-24	True	AATAAA	-19	NA	68751520	68707439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189_68750700_68751419
transcript_34091.nic	chr11	-	2381	8	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	-44	0	intron_retention	FALSE	canonical	3	41	junction_3	45.0632208963254	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-1	True	NA	-24	True	AATAAA	-19	NA	68751564	68707439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68747207_68747367_68750189_68750700_68751419
transcript_34092.nic	chr11	-	2590	7	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	407	0	intron_retention	FALSE	canonical	3	41	junction_3	48.5718253952044	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	6442	False	NA	-24	True	AATAAA	-19	NA	68751053	68707439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68747207_68747367_68750189
transcript_34099.nic	chr11	-	2734	4	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	407	-132	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	53.074371299987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCCTGACACTCTGT	6442	False	NA	NA	False	AATAAA	-17	NA	68751053	68736263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68737886_68738699_68738789_68747207_68747367_68750189
transcript_34106.nic	chr11	-	876	3	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	-104	8684	-44	0	5prime_fragment	FALSE	canonical	3	75	junction_2	52	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	-1	True	NA	-36	True	ACTAAA	-19	NA	68751564	68747145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_68747367_68750189_68750700_68751419
transcript_34107.known	chr11	-	643	2	FSM	ENSG00000132749.11	ENST00000432435.2	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	6884	False	NA	-36	True	ACTAAA	-19	NA	68750611	68747145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68747367_68750189
transcript_34108.known	chr11	-	764	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	513.307061016005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACCAGGTTTCTGTG	-8	True	NA	-14	True	AATAAA	-13	NA	68903827	68891282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_34109.known	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	TRUE	canonical	3	1274	junction_2	67.6816485877491	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-13	True	NA	-9	True	AATAAA	-18	NA	68903832	68891277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_34110.nic	chr11	-	630	6	NIC	ENSG00000197345.13	novel	693	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	529.973735198264	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACCAGGTTTCTGTG	-13	True	NA	-14	True	AATAAA	-13	NA	68903832	68891282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68903722
transcript_34114.known	chr11	-	932	6	FSM	ENSG00000197345.13	ENST00000567045.5	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	476.470187944639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCGCGTGACCCCACCT	2	True	NA	NA	False	NA	NA	NA	68903778	68892491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_34125.known	chr11	+	3914	15	FSM	ENSG00000132740.10	ENST00000255078.8	3914	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	10.1116219252494	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTGTGTCTGCTGCGG	-10	True	NA	24	True	ATTAAA	-19	NA	68903890	68940601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68938181_68938355_68939533
transcript_34131.known	chr11	+	2512	14	FSM	ENSG00000132740.10	ENST00000674955.1	2512	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	31.9409588470823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCCAGCAGGGACCGGT	32	True	NA	NA	False	NA	NA	NA	68903932	68936860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68930322_68930435_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
transcript_34137.nic	chr11	+	2722	13	ISM	ENSG00000132740.10	ENST00000675615.1	2914	14	-21	2655	-21	0	5prime_fragment	FALSE	canonical	3	59	junction_7	10.1063786238637	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTCAACTAATAAGAAC	NA	False	NA	NA	False	AAAAAG	-14	NA	68903841	68937091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
transcript_34150.known	chr11	+	2603	12	FSM	ENSG00000132740.10	ENST00000676228.1	2603	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	25.9659662820138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTCAACTAATAAGAAC	-38	True	NA	NA	False	AAAAAG	-14	NA	68903862	68937091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
transcript_34162.known	chr11	-	2132	3	FSM	ENSG00000172935.9	ENST00000309099.7	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGGCTTCATGCCC	4	True	NA	-22	True	AATAAA	-17	NA	69013246	69004397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69006262_69009853_69009958_69013082
transcript_34167.known	chr11	+	4969	25	FSM	ENSG00000162341.18	ENST00000294309.8	4969	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	13.2074789418723	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAGAAGAAACGTAATG	-11	True	NA	NA	False	AATAAA	-21	NA	69048931	69090597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69049107_69054032_69054098_69054720_69054798_69055174_69055353_69057577_69057695_69062883_69062991_69063894_69063968_69067502_69067606_69070429_69070496_69071355_69071421_69071922_69072024_69072626_69072709_69072914_69073002_69078481_69078602_69078733_69078794_69078891_69079021_69079833_69079884_69081399_69081500_69083944_69084017_69085209_69085287_69085670_69085753_69085847_69085931_69086522_69086605_69087111_69087207_69087874
transcript_3420.nic	chr1	+	1856	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-74	-145	combination_of_known_junctions	FALSE	canonical	3	194	junction_2	88.9747155095199	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCATGGTAGCAG	737	False	NA	NA	False	AATACA	-5	NA	15758709	15785184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_3421.nic	chr1	+	2001	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_2	88.9747155095199	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAAGTGCCTT	737	False	NA	13	True	NA	NA	NA	15758709	15785329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34211.known	chr11	+	2287	3	FSM	ENSG00000172927.9	ENST00000308946.3	2287	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTTTCCTGGTGCATT	7	True	NA	NA	False	AATAAA	-26	NA	69294154	69297287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69294577_69295326_69295496_69295591
transcript_34216.known	chr11	+	4238	5	FSM	ENSG00000110092.4	ENST00000227507.3	4238	5	0	0	0	0	multi-exon	TRUE	canonical	3	441	junction_1	8.24621125123532	774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTGCCTGCCTCTTTG	0	True	NA	27	True	AATAAA	-16	NA	69641155	69654474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69641512_69643030_69643247_69643831_69643992_69647993_69648143_69651117
transcript_34219.known	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.7169905660283	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-19	True	NA	2	True	AGTAAA	-21	NA	69675353	69665562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_3422.nic	chr1	+	3261	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_2	88.9747155095199	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	737	False	NA	23	True	AATAAA	-21	NA	15758709	15786589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34224.known	chr11	-	444	4	FSM	ENSG00000149716.13	ENST00000543562.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	21.4527905462721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCGAGGAACAGATGTGTG	-16	True	NA	96	True	NA	NA	NA	69675350	69667493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69675189
transcript_34225.known	chr11	-	817	4	FSM	ENSG00000149716.13	ENST00000539414.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCGAACGTCGAGG	12	True	NA	84	True	NA	NA	NA	69675322	69667505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69668013_69671748_69671820_69673215_69673322_69675189
transcript_34227.known	chr11	-	2274	3	FSM	ENSG00000149716.13	ENST00000536870.5	2274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGGGACCATTTATA	11	True	NA	-1	True	AGTAAA	-18	NA	69675323	69665565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69667588_69667894_69668013_69675189
transcript_34228.known	chr11	-	1821	3	FSM	ENSG00000162344.4	ENST00000294312.4	1821	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	6	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	-1	True	NA	-6	True	ATTAAA	-17	NA	69704022	69698237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69699577_69703260_69703365_69703644
transcript_34230.known	chr11	-	3165	3	FSM	ENSG00000075388.4	ENST00000168712.3	3165	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGACCTGGTTCCCTC	-3	True	NA	-4	True	ATTAAA	-25	NA	69775341	69771021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69773486_69774023_69774128_69774744
transcript_34231.known	chr11	-	557	2	FSM	ENSG00000075388.4	ENST00000538040.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACCATGAAGGTCACCC	174	False	NA	NA	False	NA	NA	NA	69775164	69773348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69773486_69774744
transcript_34241.known	chr11	+	1708	2	FSM	ENSG00000168040.5	ENST00000301838.5	1708	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	985	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTATTCCTGTTGGTGG	-18	True	NA	26	True	ATTAAA	-33	NA	70203295	70207390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70203746_70206132
transcript_34242.known	chr11	+	5240	28	FSM	ENSG00000131626.19	ENST00000253925.12	5240	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	63.3838005553431	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAATACTGAGAATAAG	-23	True	NA	NA	False	AATAAA	-26	NA	70270689	70384396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029_70378196_70382087_70382159_70383002
transcript_3425.known	chr1	+	3314	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	52.8251833882288	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	1	True	NA	23	True	AATAAA	-21	NA	15758794	15786589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34254.known	chr11	+	550	2	FSM	ENSG00000131626.19	ENST00000532793.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGGTAGAGATGG	NA	False	NA	NA	False	TTTAAA	-29	NA	70362134	70362795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70362177_70362287
transcript_34260.known	chr11	+	2247	19	FSM	ENSG00000085733.16	ENST00000376561.7	2247	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_18	238.353722256608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGATTTGCTTTGGTCTGT	-14	True	NA	28	True	AATAAA	-19	NA	70398540	70436579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025_70435120_70435465_70435745_70436281
transcript_34265.known	chr11	+	3249	18	FSM	ENSG00000085733.16	ENST00000301843.13	3249	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	204.508153321785	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGATTTGCTTTGGT	-26	True	NA	24	True	AATAAA	-15	NA	70398528	70436575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70421469_70421581_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_34277.known	chr11	+	3272	17	FSM	ENSG00000085733.16	ENST00000346329.7	3272	17	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_10	137.640936293495	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGGTCTGTGGTCA	614	False	NA	33	True	AATAAA	-24	NA	70398403	70436584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_34297.nic	chr11	+	3059	5	ISM	ENSG00000085733.16	ENST00000527622.5	597	6	-32	-2091	-24	2091	intron_retention	FALSE	canonical	3	802	junction_2	37.8376465970071	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATCTCTGCGTTAAGA	715	False	NA	NA	False	AATAAA	-4	NA	70398504	70412521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830
transcript_34298.known	chr11	+	1087	4	FSM	ENSG00000085733.16	ENST00000482755.6	1087	4	0	0	0	0	multi-exon	FALSE	canonical	3	802	junction_2	41.2148840428633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCACAGCCTGCACAA	-18	True	NA	NA	False	NA	NA	NA	70398536	70408342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517
transcript_34314.known	chr11	-	2710	10	FSM	ENSG00000172893.18	ENST00000682708.1	2710	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	418.47946392672	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71440785_71440837_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_34327.known	chr11	-	2645	9	FSM	ENSG00000172893.18	ENST00000683714.1	2645	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	327.883911430555	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTATATTAAACTTCCC	NA	False	NA	NA	False	TTTAAA	-23	NA	71448435	71434442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437803_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_34328.known	chr11	-	2601	9	FSM	ENSG00000172893.18	ENST00000407721.6	2601	9	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_8	309.120526655866	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	24	False	71448417	NA	False	ATTAAA	-16	NA	71448393	71434413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448312
transcript_3433.nic	chr1	+	1840	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	-145	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	110.061843410875	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCATGGTAGCAG	756	False	NA	NA	False	AATACA	-5	NA	15758728	15785184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34330.nic	chr11	-	2804	9	NIC	ENSG00000172893.18	novel	2710	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	15	junction_1	322.984810014341	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	71448439	71434413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_71435974_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_3435.nic	chr1	+	3245	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	110.061843410875	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	756	False	NA	23	True	AATAAA	-21	NA	15758728	15786589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34350.known	chr11	-	2472	8	FSM	ENSG00000172893.18	ENST00000682880.1	2472	8	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_2	54.6905953934476	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTCTCCTGCCTCAGCC	NA	False	NA	NA	False	NA	NA	NA	71448435	71436579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_34363.known	chr11	+	680	2	FSM	ENSG00000254682.2	ENST00000529369.2	792	2	112	0	112	0	multi-exon	FALSE	canonical	3	285	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAATTGTGTGTTTTT	6	True	NA	19	True	AATAAA	-19	NA	71448673	71452157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71448886_71451689
transcript_34364.known	chr11	-	2695	9	FSM	ENSG00000172893.18	ENST00000683287.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	330.690470833376	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443956_71444216_71444854_71444959_71447609_71447735_71448289
transcript_3437.nic	chr1	+	1978	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	-145	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	88.544392114916	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCATGGTAGCAG	756	False	NA	NA	False	AATACA	-5	NA	15758728	15785184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34373.known	chr11	+	2679	21	FSM	ENSG00000172890.13	ENST00000319023.7	2679	21	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	21.5752172642595	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTCTGGGGACCAGTC	-24	True	NA	NA	False	NA	NA	NA	71453202	71501816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_3438.nic	chr1	+	2123	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	88.544392114916	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAAGTGCCTT	756	False	NA	13	True	NA	NA	NA	15758728	15785329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34385.nnic	chr11	+	2277	20	NIC	ENSG00000172890.13	novel	2679	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	36.8766003925212	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTGGAATCCAATGCACA	-16	True	NA	22	True	AATAAA	-17	NA	71453210	71501539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_71453382_71455109_71455171_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_3439.nic	chr1	+	3383	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	88.544392114916	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	756	False	NA	23	True	AATAAA	-21	NA	15758728	15786589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_34393.known	chr11	+	839	5	FSM	ENSG00000172890.13	ENST00000524949.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	27.2614654778499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAATAAAAAGGGTGT	4	True	NA	NA	False	AATGAA	-45	NA	71453230	71464508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052
transcript_34399.known	chr11	+	963	3	FSM	ENSG00000172890.13	ENST00000534634.5	963	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	10	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGAGGCCTCTGCACGC	0	True	NA	NA	False	NA	NA	NA	71453108	71459056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427
transcript_34400.known	chr11	+	524	2	FSM	ENSG00000172890.13	ENST00000533612.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTGCGTCCCCACA	-18	True	NA	NA	False	NA	NA	NA	71453208	71455460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109
transcript_34402.nic	chr11	+	1001	2	ISM	ENSG00000255562.2	ENST00000525262.2	1143	3	1956	0	1955	0	3prime_fragment	FALSE	canonical	3	16	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGGGAGTCCCAGGC	NA	False	NA	2	True	AATAAA	-17	NA	71605215	71608040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_71605468_71607291
transcript_34409.nnic	chr11	+	2518	5	Fusion	ENSG00000255319.5_ENSG00000284625.1	novel	125	2	NA	NA	-146	4166	multi-exon	FALSE	canonical	1	4	junction_2	4.89897948556636	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGCTGGGCACGATGGC	NA	False	NA	NA	False	ATTAAA	-6	NA	71639404	71735685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_71639770_71714374_71714559_71722172_71722309_71731421_71731596_71734026
transcript_34418.nnic	chr11	+	2382	4	Fusion	ENSG00000255319.5_ENSG00000284625.1	novel	317	3	NA	NA	-146	4166	multi-exon	FALSE	canonical	1	1	junction_2	6.12825877028341	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGCTGGGCACGATGGC	NA	False	NA	NA	False	ATTAAA	-6	NA	71639404	71735685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_71639770_71714374_71714559_71731421_71731596_71734026
transcript_34423.nic	chr11	+	2225	6	FSM	ENSG00000158483.18	ENST00000688029.1	2225	6	-3	3	0	1	multi-exon	FALSE	canonical	2	5	junction_3	35.6516479282515	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	NA	False	NA	NA	False	AATAAA	-18	NA	71787480	71801234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71791735_71791820_71793379_71793482_71796016_71796167_71799560
transcript_34424.known	chr11	+	952	5	FSM	ENSG00000158483.18	ENST00000426628.7	956	5	4	0	-2	0	multi-exon	TRUE	canonical	3	8	junction_2	33.8332307059199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGCTGCAGCTGCCACAT	-6	True	NA	NA	False	NA	NA	NA	71787517	71800103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71791738_71791820_71796016_71796167_71799560
transcript_34426.known	chr11	+	2111	5	FSM	ENSG00000158483.18	ENST00000359244.9	2111	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	40.106109260311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	-10	True	NA	NA	False	AATAAA	-21	NA	71787513	71801237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71793379_71793482_71796016_71796167_71799560
transcript_34429.known	chr11	+	2010	4	FSM	ENSG00000158483.18	ENST00000346333.11	2044	4	29	5	-1	1	multi-exon	FALSE	canonical	3	48	junction_2	18.8738502225228	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	-14	True	NA	NA	False	AATAAA	-18	NA	71787509	71801234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799560
transcript_34431.known	chr11	+	990	4	FSM	ENSG00000158483.18	ENST00000688077.1	2141	4	17	1134	0	-4	multi-exon	FALSE	canonical	2	3	junction_3	35.1220095603249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCGCTGCAGCTGCC	13	True	NA	NA	False	NA	NA	NA	71787536	71800099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796309_71799560
transcript_34439.known	chr11	-	4792	6	FSM	ENSG00000254469.9	ENST00000679412.2	4792	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.71596624119289	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACCAAAGCCTATGGAAT	-11	True	NA	NA	False	AATAAA	-18	NA	71928594	71880703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71884622_71916073_71916253_71917620_71917777_71918884_71919027_71923308_71923476_71928364
transcript_34443.known	chr11	+	2375	9	FSM	ENSG00000137522.18	ENST00000526549.5	2375	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	99.183857053454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	6	True	NA	28	True	AATAAA	-27	NA	71929050	71997595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71962151_71962290_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_34448.known	chr11	+	2282	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_6	18.9930085821073	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	1	True	NA	30	True	AATAAA	-29	NA	71929045	71997597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_34452.known	chr11	+	2202	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	56.4920077424719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	12	False	NA	24	True	AATAAA	-23	NA	71929081	71997591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_34462.known	chr11	+	786	7	FSM	ENSG00000137522.18	ENST00000530655.5	786	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	93.2880842694643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTCCAAGGCATCAACT	-18	True	NA	NA	False	NA	NA	NA	71929026	71996275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_34466.known	chr11	+	812	7	FSM	ENSG00000137522.18	ENST00000525243.5	812	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	83.2674739752697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCCACTCAGGACCCC	6	False	NA	NA	False	NA	NA	NA	71929075	71996420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_34468.nic	chr11	+	2010	6	NIC	ENSG00000137522.18	novel	2375	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	97.6524449258696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	314	False	NA	28	True	AATAAA	-27	NA	71929014	71997595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_71929125_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_34471.known	chr11	+	721	6	FSM	ENSG00000137522.18	ENST00000528683.5	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_5	11.2605506082074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGCACTAGGGTGAGA	2	True	NA	NA	False	NA	NA	NA	71929046	71990796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596
transcript_34475.nic	chr11	+	1921	6	NIC	ENSG00000137522.18	novel	812	7	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_3	95.0528274171789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	320	False	NA	28	True	AATAAA	-27	NA	71929020	71997595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_71929125_71957226_71957265_71960749_71960892_71994718_71994853_71995449_71995552_71996194
transcript_34479.known	chr11	+	870	5	FSM	ENSG00000137522.18	ENST00000533380.5	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	109.736901268443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCCCTGCCTAAGCAG	-13	True	NA	71	True	NA	NA	NA	71929031	71996593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71994718_71994853_71995449_71995552_71996194
transcript_34480.nic	chr11	+	2100	5	ISM	ENSG00000137522.18	ENST00000528683.5	721	6	-26	2132	3	1636	5prime_fragment	FALSE	canonical	3	220	junction_1	8.25757228245687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTAGCTGGGTGT	320	False	NA	NA	False	AAAAAG	-9	NA	71929020	71988664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003
transcript_34491.known	chr11	-	7227	27	FSM	ENSG00000137497.19	ENST00000358965.10	7227	27	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_24	114.372981923542	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	0	True	NA	-6	True	AATAAA	-20	NA	72080515	72002863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72062588_72062687_72069841_72069912_72080457
transcript_34506.known	chr11	-	3775	25	FSM	ENSG00000137497.19	ENST00000351960.10	3775	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	112.56911457214	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	306	False	NA	-6	True	AATAAA	-20	NA	72080389	72002863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080319
transcript_34534.known	chr11	-	2331	15	FSM	ENSG00000137497.19	ENST00000537217.5	2331	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_14	61.1810628297645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGCCCAGGAGAAGGAC	41	True	NA	NA	False	AAAAAG	-16	NA	72080474	72015428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080319
transcript_34536.known	chr11	-	2766	14	FSM	ENSG00000137497.19	ENST00000542977.5	2766	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	57.9012626202378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGAAGGTGGCAGGCA	1011	False	72041153	NA	False	NA	NA	NA	72041137	72014947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72040958
transcript_34544.known	chr11	-	1969	13	FSM	ENSG00000137497.19	ENST00000540843.5	1969	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_12	44.582242977321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGGATGAACCCAGCATA	21	True	NA	NA	False	NA	NA	NA	72080494	72016975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080457
transcript_34547.known	chr11	-	1686	12	FSM	ENSG00000137497.19	ENST00000536119.5	1686	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_11	62.9297128575253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTTACTATTGGTA	14	True	NA	NA	False	NA	NA	NA	72041086	72017279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72040958
transcript_34559.known	chr11	+	2642	6	FSM	ENSG00000184154.16	ENST00000289488.8	2129	6	-513	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	5.97996655509042	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTTGCTGACTCCAT	9	True	NA	12	True	GATAAA	-21	NA	72080336	72096895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_34566.known	chr11	-	867	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	258.699516814392	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-4	True	NA	-8	True	AATAAA	-18	NA	72112769	72109589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
transcript_34567.known	chr11	-	734	6	FSM	ENSG00000110200.9	ENST00000535503.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	380.1965807316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCTTGATTGCCAGGT	-15	False	NA	-68	True	NA	NA	NA	72112780	72109649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112733
transcript_34568.known	chr11	-	849	6	FSM	ENSG00000110200.9	ENST00000538919.5	849	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	350.673637446558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCAGCTGATGGCCCC	3	True	NA	NA	False	NA	NA	NA	72112232	72109801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72111923
transcript_34570.known	chr11	-	872	6	FSM	ENSG00000110200.9	ENST00000545680.5	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	323.88183030235	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	11	True	NA	-5	True	AATAAA	-21	NA	72112754	72109586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
transcript_34572.known	chr11	-	848	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	310.824709442477	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-9	True	NA	-7	True	AATAAA	-19	NA	72112774	72109588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
transcript_34578.known	chr11	-	899	5	FSM	ENSG00000149357.10	ENST00000535872.1	899	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	508.306256109444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGTGACCAGGGTCTG	-31	True	NA	-94	True	NA	NA	NA	72103297	72097426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099239_72103219
transcript_34579.known	chr11	-	1089	5	FSM	ENSG00000149357.10	ENST00000278671.10	1089	5	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	112.732814654829	4417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTTCTGGCCCCTC	-31	True	NA	-16	True	GATAAA	-18	NA	72103297	72097291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099257_72103182
transcript_34580.known	chr11	-	704	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	347.917734529299	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	21	True	NA	-8	True	AATAAA	-18	NA	72112686	72109589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
transcript_34582.known	chr11	+	2049	4	FSM	ENSG00000184154.16	ENST00000642510.1	2049	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	16.9705627484771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGATTTCATTTGAT	338	False	NA	-31	True	NA	NA	NA	72080665	72096852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72080886_72093495_72093702_72094947_72095097_72095378
transcript_34584.known	chr11	-	1346	4	FSM	ENSG00000149357.10	ENST00000538404.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_3	44.9468822302751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTTTTTTTGTTTTG	30	True	NA	-15	True	AATGAA	-38	NA	72103236	72097347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72098416_72098780_72098859_72099110_72099257_72103182
transcript_34589.known	chr11	-	2276	7	FSM	ENSG00000137497.19	ENST00000540626.5	2276	7	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_6	38.8873015549064	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	8240	False	NA	-6	True	AATAAA	-20	NA	72007916	72002863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188
transcript_34590.known	chr11	-	812	6	FSM	ENSG00000110200.9	ENST00000542531.5	812	6	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	385.235512381712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	486	False	NA	-7	True	AATAAA	-19	NA	72112279	72109588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112215
transcript_34591.known	chr11	+	1061	6	FSM	ENSG00000110195.14	ENST00000393681.6	1061	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	10.6131993291373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTGAGAATTAT	-3	True	NA	12	True	AATAAA	-12	NA	72189667	72196298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72189760_72190575_72190642_72192165_72192342_72195270_72195460_72195611_72195748_72195896
transcript_34592.known	chr11	+	930	4	FSM	ENSG00000110195.14	ENST00000393676.5	930	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCTTGAGAATTATT	2	True	NA	13	True	AATAAA	-13	NA	72192139	72196299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72192342_72195270_72195460_72195611_72195748_72195896
transcript_34597.known	chr11	+	4789	28	FSM	ENSG00000165458.15	ENST00000298229.7	4789	28	0	0	0	0	multi-exon	TRUE	canonical	3	264	junction_1	33.8559038015857	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACAACCAAAAAAATTAGG	-21	True	NA	NA	False	AATAAA	-23	NA	72224766	72239147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
transcript_34598.known	chr11	-	10053	17	FSM	ENSG00000162129.14	ENST00000294053.9	10053	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	23.0467425843654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-8	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72372924_72373015_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_346.nic	chr1	-	4153	19	NIC	ENSG00000188976.11	novel	2757	19	NA	NA	-1330	0	combination_of_known_junctions	FALSE	canonical	3	821	junction_1	220.204198163634	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGGCTCCTGGAGAT	6340	False	NA	-16	True	AATAAA	-27	NA	960639	944204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_34600.known	chr11	-	9963	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	11.9825799485012	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-8	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_34601.known	chr11	-	2071	15	FSM	ENSG00000162129.14	ENST00000340729.9	2071	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.5720802811202	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTTACCTTCCCCTC	-11	True	NA	-18	True	AATAAA	-23	NA	72434534	72293302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72430311_72430364_72434071
transcript_34604.nic	chr11	-	3510	23	ISM	ENSG00000186642.16	ENST00000444035.6	4193	31	52072	-1	31	0	3prime_fragment	FALSE	canonical	1	3	junction_13	5.74240425358318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCCCCATGGGGCTGT	46	False	NA	-9	True	AATAAA	-18	NA	72590388	72576140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_72577595_72578232_72578340_72578475_72578515_72578896_72579010_72579283_72579384_72579533_72579609_72580576_72580625_72580885_72580974_72581356_72581480_72581876_72581948_72582443_72582567_72583437_72583516_72584200_72584314_72584550_72584729_72584871_72584945_72585370_72585435_72585553_72585594_72586069_72586182_72588783_72588915_72589174_72589241_72589750_72589793_72589906_72589982_72590191
transcript_34608.known	chr11	-	4284	31	FSM	ENSG00000186642.16	ENST00000334456.10	4284	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	6.65198383107542	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCCCCATGGGGCTGT	-12	True	NA	-9	True	AATAAA	-18	NA	72674422	72576140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72577595_72578232_72578340_72578475_72578515_72578896_72579010_72579283_72579384_72579533_72579609_72580576_72580625_72580885_72580974_72581356_72581480_72581876_72581948_72582443_72582567_72583437_72583516_72584200_72584314_72584550_72584729_72584871_72584945_72585370_72585435_72585553_72585594_72586069_72586182_72588783_72588915_72589174_72589241_72589750_72589793_72589906_72589982_72590191_72590245_72590426_72590581_72591296_72591357_72596592_72596649_72597509_72597620_72605137_72605227_72608661_72608752_72642253_72642327_72674136
transcript_34609.known	chr11	-	5156	35	FSM	ENSG00000186635.15	ENST00000393609.8	5156	35	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	65.914356722533	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATT	-2	True	NA	-3	True	TATAAA	-23	NA	72752408	72685068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72692752_72692786_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
transcript_34617.nic	chr11	-	5173	34	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_33	47.7468838977659	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	-9	True	TATAAA	-17	NA	72752464	72685074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
transcript_34622.nnic	chr11	-	5095	33	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	3	95	junction_32	50.6674204987781	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	-9	True	TATAAA	-17	NA	72752469	72685074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72752327
transcript_34625.nic	chr11	-	4990	33	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_20	60.8137204399632	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	-9	True	TATAAA	-17	NA	72752464	72685074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
transcript_34626.known	chr11	-	4066	32	FSM	ENSG00000186635.15	ENST00000426523.5	4066	32	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_31	59.7010938219559	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGAGCCAGCGGGGG	4730	False	NA	NA	False	NA	NA	NA	72722028	72685587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72721849
transcript_34633.known	chr11	-	3883	31	FSM	ENSG00000186635.15	ENST00000429686.5	3883	31	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_30	71.5653236948982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGAGCCAGCGGGGG	4730	False	NA	NA	False	NA	NA	NA	72722028	72685587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72721849
transcript_34654.known	chr11	-	1100	7	FSM	ENSG00000214530.10	ENST00000537947.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	12.0784472879956	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCAGCATGCGGACTCA	-4	True	NA	NA	False	NA	NA	NA	72781893	72755015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72781663
transcript_34655.known	chr11	-	2330	7	FSM	ENSG00000214530.10	ENST00000334805.11	2330	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	48.8011839564939	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTCATCACTGTGCCT	8	True	NA	-17	True	AATAAA	-17	NA	72794047	72754728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72792874
transcript_34662.known	chr11	-	4710	20	FSM	ENSG00000137478.15	ENST00000409418.9	4710	20	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	9.33494907528837	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCTAAGTTTTAATAT	3	True	NA	-5	True	AATAAA	-14	NA	73142318	72836744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72838875_72840876_72840960_72841453_72841584_72842620_72842842_72843150_72843329_72843448_72843533_72849754_72849890_72867864_72868027_72887469_72887575_72889828_72889946_72902542_72902639_72921827_72921951_72984087_72984217_72985061_72985117_72988963_72989098_73000989_73001135_73015808_73015886_73083694_73083741_73140030_73140129_73141856
transcript_34664.known	chr11	-	4340	19	FSM	ENSG00000137478.15	ENST00000311172.11	4340	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	14.9814700361628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCTAAGTTTTAATAT	464	False	NA	-5	True	AATAAA	-14	NA	73142046	72836744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72838875_72840876_72840960_72841453_72841584_72842620_72842842_72843150_72843329_72843448_72843533_72849754_72849890_72867864_72868027_72887469_72887575_72889828_72889946_72902542_72902639_72921827_72921951_72984087_72984217_72985061_72985117_72988963_72989098_73000989_73001135_73015808_73015886_73083694_73083741_73141856
transcript_34675.known	chr11	+	2254	18	FSM	ENSG00000168010.11	ENST00000435507.6	2254	18	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	27.1585120190062	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTCTGCCTACCTCT	4	True	NA	11	True	NA	NA	NA	72814414	72829633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821547_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34676.known	chr11	+	2140	18	FSM	ENSG00000168010.11	ENST00000321297.10	2140	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	24.9377078609162	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	0	True	NA	13	True	NA	NA	NA	72814410	72829635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34682.nic	chr11	+	2797	17	NIC	ENSG00000168010.11	novel	2140	18	NA	NA	-41	0	intron_retention	FALSE	canonical	3	11	junction_7	22.8636413055751	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	393	False	NA	13	True	NA	NA	NA	72814364	72829635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34683.nic	chr11	+	2123	17	NIC	ENSG00000168010.11	novel	2140	18	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	22.9969427315893	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	393	False	NA	13	True	NA	NA	NA	72814364	72829635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34693.known	chr11	+	3841	16	FSM	ENSG00000168010.11	ENST00000439504.6	3841	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	19.7675379234632	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	8	True	NA	13	True	NA	NA	NA	72814418	72829635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34702.nic	chr11	+	4199	15	NIC	ENSG00000168010.11	novel	3841	16	NA	NA	-41	0	intron_retention	FALSE	canonical	3	31	junction_3	19.2899466255437	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	393	False	NA	13	True	NA	NA	NA	72814364	72829635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34707.known	chr11	+	1492	3	FSM	ENSG00000168010.11	ENST00000540567.1	1492	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGAGCTCCCCAAG	21	True	NA	NA	False	NA	NA	NA	72814431	72819015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72814564_72816727_72816828_72817755
transcript_34710.known	chr11	+	1400	12	FSM	ENSG00000168010.11	ENST00000540222.5	1400	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	23.46757918336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCCCAAAGTAGA	7442	False	NA	-24	True	NA	NA	NA	72822438	72829598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34711.known	chr11	+	1575	13	FSM	ENSG00000168010.11	ENST00000541367.5	1575	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	27.1245839701839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGAAAAAAATGATATCT	7344	False	NA	-10	True	NA	NA	NA	72822340	72829612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_34712.known	chr11	+	8619	3	FSM	ENSG00000175591.12	ENST00000393597.7	8619	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCTGGCAGGTACCAAG	-5	True	NA	99	True	NA	NA	NA	73218280	73242427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73218433_73227980_73228176_73234155
transcript_34713.known	chr11	+	2174	3	FSM	ENSG00000175591.12	ENST00000393596.2	2174	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCCCTATTGTGTGGT	90	False	NA	NA	False	ACTAAA	-19	NA	73218456	73235934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73218657_73227980_73228176_73234155
transcript_34714.known	chr11	+	8163	21	FSM	ENSG00000110237.5	ENST00000263674.4	8163	21	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_7	5.2773099207835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGAGAGCTTCTGAGT	2	True	NA	91	True	NA	NA	NA	73308275	73369388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73311831_73346882_73346961_73352829_73353013_73355532_73355650_73355860_73355954_73356174_73356352_73356708_73356760_73357024_73357135_73357241_73357328_73359833_73359953_73360319_73360534_73361087_73361162_73362039_73362240_73362432_73362735_73363205_73363456_73363746_73363834_73364171_73364240_73364451_73364601_73365389_73365565_73365677_73365948_73367583
transcript_34719.known	chr11	+	579	2	FSM	ENSG00000110237.5	ENST00000544519.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTGTTCTTCCACGT	1918	False	NA	NA	False	NA	NA	NA	73311564	73347195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73311831_73346882
transcript_34721.known	chr11	+	3402	11	FSM	ENSG00000054967.13	ENST00000064780.7	3402	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	5.24976189936268	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTTGCTTTTTTCTT	12	True	NA	NA	False	CATAAA	-18	NA	73376398	73397474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73376500_73389111_73389182_73390550_73390626_73390754_73390922_73391143_73391224_73392210_73392469_73393836_73393918_73394235_73394318_73394476_73394735_73395086_73395286_73395443
transcript_34727.known	chr11	-	7192	8	FSM	ENSG00000054965.11	ENST00000356467.5	7192	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	4.1206300291017	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCCTGCTGCTCATG	9	True	NA	0	True	AATAAA	-19	NA	73598112	73400486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73406745_73407512_73407644_73409486_73409662_73411393_73411537_73419873_73420000_73430689_73430771_73468404_73468493_73597922
transcript_34731.known	chr11	+	2275	7	FSM	ENSG00000021300.14	ENST00000398492.8	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	42.6826142071401	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	NA	False	NA	33	True	AATAAA	-24	NA	73646177	73662819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73646627_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_34732.known	chr11	+	2016	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	15.9478316185409	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	948	False	NA	33	True	AATAAA	-24	NA	73647548	73662819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_34738.known	chr11	-	3326	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	141.451369013942	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	31	True	NA	NA	False	AATAAA	-17	NA	73761074	73675637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
transcript_34739.known	chr11	-	3389	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	91.794357569693	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-32	True	NA	NA	False	AATAAA	-17	NA	73761137	73675637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
transcript_34740.known	chr11	-	758	5	FSM	ENSG00000175582.20	ENST00000541588.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	225.122605484212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCATCTTCAACCTTC	31	True	NA	NA	False	NA	NA	NA	73761074	73677893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73677963_73679653_73679721_73720845_73720900_73730764_73730824_73760565
transcript_34745.nic	chr11	-	1347	3	ISM	ENSG00000175582.20	ENST00000400470.3	522	7	-524	16017	3	9283	5prime_fragment	FALSE	canonical	3	486	junction_2	37	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTATTTATTTGTT	-29	True	NA	NA	False	NA	NA	NA	73761134	73720180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_73720900_73730764_73730824_73760565
transcript_34746.nic	chr11	-	1159	3	ISM	ENSG00000175582.20	ENST00000400470.3	522	7	-503	16184	6	9116	5prime_fragment	FALSE	canonical	3	486	junction_2	37	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGG	-8	True	NA	NA	False	ATTAAA	-12	NA	73761113	73720347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_73720900_73730764_73730824_73760565
transcript_34747.known	chr11	-	1812	2	FSM	ENSG00000175582.20	ENST00000541795.1	1812	2	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAAGTTCTGAAATCAG	3011	False	NA	NA	False	GATAAA	-44	NA	73761017	73729463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73730824_73760565
transcript_34751.known	chr11	+	1004	9	FSM	ENSG00000175581.14	ENST00000540162.5	1004	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	228.705289346355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTGTACTTGCCA	-10	True	NA	-66	True	NA	NA	NA	73787876	73864515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73817822_73817948_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_34752.known	chr11	+	1560	9	FSM	ENSG00000175581.14	ENST00000508278.6	1560	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	234.29278558035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	-15	True	NA	NA	False	NA	NA	NA	73787871	73865133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73823012_73823071_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_34756.known	chr11	+	1500	8	FSM	ENSG00000175581.14	ENST00000310614.12	1500	8	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_3	41.5790371044185	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	-13	True	NA	NA	False	NA	NA	NA	73787873	73865133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_34760.known	chr11	+	742	7	FSM	ENSG00000175581.14	ENST00000544819.5	742	7	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	164.274922005764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGGGTAGTTAGAGT	-2	True	NA	NA	False	NA	NA	NA	73787884	73864424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_34762.known	chr11	+	661	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	198.615205862995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	22	True	NA	21	True	AATAAA	-17	NA	73787908	73864602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
transcript_34770.known	chr11	+	1639	13	FSM	ENSG00000175575.13	ENST00000536003.5	1639	13	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_2	296.31917851458	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTGAATATGAAGAACTT	-9	True	NA	17	True	AATAAA	-18	NA	73876996	73927728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73877069_73878778_73878820_73887030_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_34778.known	chr11	+	4954	12	FSM	ENSG00000175575.13	ENST00000310571.8	4954	12	0	0	0	0	multi-exon	FALSE	canonical	2	465	junction_8	118.750589385227	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATAAGGAGGGATATGG	-7	True	NA	NA	False	ATTAAA	-18	NA	73876998	73931114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_34783.known	chr11	-	582	3	FSM	ENSG00000181924.7	ENST00000537289.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGAGTTGAGAGCCAT	2	True	NA	NA	False	AAAACA	-16	NA	73876843	73872996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73873395_73876478_73876576_73876756
transcript_34785.known	chr11	+	2020	2	FSM	ENSG00000175575.13	ENST00000381783.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	268	False	NA	NA	False	NA	NA	NA	73876973	73880703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73877069_73878778
transcript_34787.known	chr11	-	818	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTCTTTTGTTTTT	-1	True	NA	-4	True	AATAAA	-22	NA	73876846	73872666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73873395_73876756
transcript_34789.known	chr11	-	922	2	FSM	ENSG00000181924.7	ENST00000545127.1	922	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTCTTTTGTTT	171	False	NA	-6	True	AATAAA	-20	NA	73876674	73872668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73873395_73876478
transcript_34792.known	chr11	-	1644	8	FSM	ENSG00000175567.11	ENST00000663595.2	1644	8	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_6	24.7204781672266	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTCCTCCCTCTCTTGT	-1	True	NA	-32	True	CATAAA	-16	NA	73982843	73974671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73975122_73975490_73975672_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_34799.known	chr11	-	7939	33	FSM	ENSG00000168014.18	ENST00000334126.12	7939	33	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_21	11.0607343223676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCACAAGTGTTTCGC	-7	True	NA	-7	True	AATAAA	-20	NA	74171002	74012717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74013526_74028286_74028399_74033350_74034279_74037477_74037699_74042053_74042219_74048204_74048339_74049336_74049543_74054606_74054672_74057405_74057545_74074252_74074601_74078114_74078718_74084880_74084971_74085617_74085887_74090812_74090937_74092415_74092589_74093815_74094000_74095227_74095409_74098008_74098256_74100524_74100677_74103130_74103626_74106370_74106494_74109033_74109153_74113779_74113893_74114383_74114594_74118227_74118383_74122987_74123136_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_34802.known	chr11	-	936	4	FSM	ENSG00000168014.18	ENST00000541922.2	936	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	35.3679076125361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGAGTTTCTTATATA	5	True	NA	NA	False	ATTAAA	-23	NA	74170877	74158326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74158695_74161398_74161557_74168343_74168614_74170737
transcript_34809.known	chr11	+	2496	14	FSM	ENSG00000214517.10	ENST00000398427.6	2496	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	135.798711116227	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	4	True	NA	21	True	AATAAA	-17	NA	74171321	74254703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246033_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_34810.known	chr11	+	2487	14	FSM	ENSG00000214517.10	ENST00000328257.13	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_9	37.8450593963077	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	-29	True	NA	21	True	AATAAA	-17	NA	74171288	74254703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246075_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_34818.known	chr11	-	2255	13	FSM	ENSG00000149380.12	ENST00000331597.9	2255	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.552770798392567	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCCAACTGAGAATAT	-4	True	NA	NA	False	ATTAAA	-16	NA	74311640	74266656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74267319_74268144_74268242_74269651_74269721_74273544_74273608_74276984_74277145_74279387_74279453_74285808_74285986_74286227_74286392_74289078_74289131_74298211_74298362_74302368_74302593_74304269_74304413_74311411
transcript_34825.known	chr11	-	8477	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_6	15.2358188987265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTCTGTGTAATTT	-11	True	NA	-6	True	AATAAA	-17	NA	74398433	74330315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
transcript_34832.known	chr11	-	3064	3	FSM	ENSG00000175538.11	ENST00000310128.9	3064	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTGTAAGAATGAATGG	-3	True	NA	NA	False	AATAAA	-14	NA	74467549	74454840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74457604_74461954_74462104_74467397
transcript_34833.known	chr11	-	663	1	FSM	ENSG00000165434.8	ENST00000622957.1	663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATCATTGTAAGTTAT	14	True	NA	NA	False	NA	NA	NA	74398408	74397745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74397700_74398400
transcript_34834.known	chr11	+	3788	12	FSM	ENSG00000077514.9	ENST00000263681.7	3788	12	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_8	45.8531612508256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGTATGTAGCATGA	-29	True	NA	NA	False	AATAAA	-35	NA	74592581	74643076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_34839.nic	chr11	+	897	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-36	17618	-10	6688	5prime_fragment	FALSE	canonical	3	297	junction_6	36.0187026248241	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGAGCAGCCTACAGTG	NA	False	NA	NA	False	AAGAAA	-4	NA	74592545	74625458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_34842.known	chr11	+	2493	2	FSM	ENSG00000254837.2	ENST00000526036.1	2493	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCCTCAAGCTATCTC	-9	True	NA	NA	False	TATAAA	-42	NA	74493365	74498533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74493974_74496648
transcript_34843.known	chr11	-	2333	2	FSM	ENSG00000175536.7	ENST00000310109.5	2333	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGTTTTCTTGAGAT	-11	True	NA	NA	False	TATAAA	-19	NA	74493724	74490518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74492365_74493237
transcript_34847.known	chr11	-	399	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	8747	False	NA	NA	False	AAGAAA	-4	NA	74746114	74745715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74745700_74746100
transcript_34857.known	chr11	+	2691	5	FSM	ENSG00000118363.13	ENST00000263672.11	2691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1183.12686872541	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTTTAAT	4	True	NA	NA	False	ATTAAA	-21	NA	74949265	74979033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_34860.known	chr11	+	612	4	FSM	ENSG00000118363.13	ENST00000530257.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	1221.17648192225	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCCTGAAATTTTA	-1	True	NA	NA	False	GATAAA	-43	NA	74949260	74977156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74965033_74965118_74969610_74969700_74976856
transcript_34863.known	chr11	+	772	4	FSM	ENSG00000118363.13	ENST00000526361.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	1213.77903901639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATAGCTTTGGGCCAT	2	True	NA	NA	False	NA	NA	NA	74949263	74977348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74965033_74965118_74969639_74969700_74976856
transcript_34867.known	chr11	+	265	2	FSM	ENSG00000118363.13	ENST00000527290.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	3067	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGAAATCTTTTCCTT	9	True	NA	NA	False	NA	NA	NA	74949270	74965169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74965033
transcript_34868.known	chr11	+	321	2	FSM	ENSG00000118363.13	ENST00000527225.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTCTTTCTCCTGGAT	17	True	NA	NA	False	AATAAA	-18	NA	74949278	74977056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74976856
transcript_34869.known	chr11	+	5929	3	FSM	ENSG00000162139.10	ENST00000294064.9	5929	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTTTTTTTTCTTA	7	True	NA	17	True	AATAAA	-18	NA	74988932	75010907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74989155_74994508_74994721_75005412
transcript_34870.known	chr11	-	7352	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.2282530689682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	-1	True	NA	0	True	AATAAA	-35	NA	75351661	75260121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_34877.known	chr11	-	1895	15	FSM	ENSG00000137486.17	ENST00000360025.7	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	7.75024686901083	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTGTGTCTGATAGT	3	True	NA	-86	True	NA	NA	NA	75351705	75265598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_34883.known	chr11	-	2338	1	FSM	ENSG00000279117.1	ENST00000624624.1	2338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGATGCTGGCTGTGCT	1272	False	NA	-7	True	AATAAA	-28	NA	75262466	75260128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75260100_75262500
transcript_34885.known	chr11	+	796	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_2	7013.14441285473	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	-2	True	NA	68	True	AATAAA	-20	NA	75399518	75405692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_34888.known	chr11	+	2059	7	FSM	ENSG00000149273.15	ENST00000531188.6	2059	7	0	0	0	0	multi-exon	FALSE	canonical	3	9957	junction_6	3438.83307080889	5779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGGATGTGCCTAGGT	-3	True	NA	11	True	ATTAAA	-23	NA	75399517	75406907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_34889.known	chr11	+	1306	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	7053.32894021602	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	10	False	NA	NA	False	NA	NA	NA	75399530	75422280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
transcript_34893.known	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	17519	junction_1	1189.08882763232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	22	False	NA	NA	False	AATAAA	-24	NA	75399542	75404994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
transcript_34895.known	chr11	+	737	6	FSM	ENSG00000149273.15	ENST00000532872.5	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	7187.88793457438	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	9	True	NA	68	True	AATAAA	-20	NA	75399529	75405692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404019_75404208_75404671_75404869_75405613
transcript_34897.known	chr11	+	903	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	7519.55862002551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	-1	True	NA	NA	False	NA	NA	NA	75399519	75405884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_34901.known	chr11	+	1373	5	FSM	ENSG00000149273.15	ENST00000529173.5	1373	5	0	0	0	0	multi-exon	FALSE	canonical	3	17519	junction_1	568.937771201737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCATAACAGGTATGTC	-6	True	NA	NA	False	NA	NA	NA	75399514	75404855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75402447_75404019_75404208_75404671
transcript_34903.known	chr11	-	2497	1	FSM	ENSG00000149243.17	ENST00000624466.1	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAATATTTGCTCCCTG	8303	False	NA	NA	False	NA	NA	NA	75424897	75422400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75422400_75424900
transcript_34905.known	chr11	-	3222	18	FSM	ENSG00000158555.15	ENST00000529721.5	3222	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	6.56086752639938	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	7	True	NA	-4	True	ATTAAA	-14	NA	75490751	75434639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75490603
transcript_34906.nic	chr11	-	3820	18	NIC	ENSG00000158555.15	novel	3222	18	NA	NA	-15	0	intron_retention	FALSE	canonical	3	14	junction_16	5.92221785818975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTGTCTCTGAATT	-14	True	NA	-5	True	ATTAAA	-13	NA	75525956	75434640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75525209
transcript_34909.known	chr11	-	3561	17	FSM	ENSG00000158555.15	ENST00000336898.8	3561	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_15	6.45144121495345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	1	True	NA	-4	True	ATTAAA	-14	NA	75525941	75434639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75490236_75490321_75525209
transcript_3493.known	chr1	+	3498	10	FSM	ENSG00000162458.13	ENST00000375771.5	3498	10	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	178.363202759889	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTGTAGGCTCTCAC	20	False	NA	28	True	AATAAA	-26	NA	15756658	15786594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15756733_15758173_15758330_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_3494.known	chr1	+	12385	15	FSM	ENSG00000065526.12	ENST00000375759.8	12385	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	25.6566815103288	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTGTGATTGT	-4	True	NA	12	True	ATTAAA	-15	NA	15847706	15940456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15848151_15872815_15873137_15876201_15876679_15909320_15909482_15911100_15911302_15916127_15916280_15918925_15919052_15919403_15919518_15920869_15920984_15922248_15922350_15928090_15936267_15937162_15937646_15937811_15938007_15938717_15938877_15939295
transcript_34947.known	chr11	+	2299	6	FSM	ENSG00000149257.16	ENST00000533603.5	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	669.424648485548	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	1628	False	NA	26	True	AATAAA	-16	NA	75562055	75572783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562320_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_34949.known	chr11	+	1268	6	FSM	ENSG00000149257.16	ENST00000533449.6	1268	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	670.706910654721	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCGAGGAGCTGCGCAGC	319	False	NA	NA	False	NA	NA	NA	75562808	75571940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562885_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_34955.known	chr11	+	2058	5	FSM	ENSG00000149257.16	ENST00000358171.8	2058	5	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_4	80.6392429279938	10568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	4	True	NA	26	True	AATAAA	-16	NA	75562252	75572783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562320_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_34973.known	chr11	+	882	4	FSM	ENSG00000149257.16	ENST00000526397.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	692.050576186452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGCTGCAAATCGTGG	-6	True	NA	NA	False	NA	NA	NA	75562242	75568966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562342_75566315_75566972_75568730_75568830_75568938
transcript_34974.known	chr11	+	3391	5	FSM	ENSG00000149257.16	ENST00000524558.5	3391	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	574.925429947224	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTGGAGCGTGGAAG	121	False	NA	25	True	AATAAA	-15	NA	75562369	75572782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_34975.known	chr11	-	3252	4	FSM	ENSG00000171533.12	ENST00000304771.8	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02768199119819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATGTTTCTCTCTGTCTC	-1	True	NA	NA	False	AATAAA	-19	NA	75669038	75586917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75588185_75605807_75606005_75608108_75608323_75667464
transcript_34976.known	chr11	-	4329	3	FSM	ENSG00000171533.12	ENST00000434603.2	4329	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGATCTTATTTCCT	747	False	NA	0	True	AATAAA	-19	NA	75668434	75602859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75606005_75608108_75608323_75667464
transcript_34977.known	chr11	+	2407	8	FSM	ENSG00000062282.15	ENST00000228027.12	2407	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	7.24780051083761	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTATTGCTGGGGCT	-1	True	NA	17	True	AATAAA	-18	NA	75768777	75801534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75769113_75784617_75784747_75790187_75790296_75790660_75790732_75796327_75796533_75797157_75797333_75798226_75798430_75800353
transcript_3498.known	chr1	-	2720	16	FSM	ENSG00000116809.12	ENST00000375743.9	2720	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	10.0456734744643	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-11	True	NA	-3	True	AATAAA	-17	NA	15976101	15941868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_34980.known	chr11	+	5117	15	FSM	ENSG00000198382.9	ENST00000356136.8	5117	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	7.85064666516233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAGAGTTAAAAGTGTA	-9	True	NA	4	True	AATAAA	-16	NA	75815209	76144232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75815525_75851882_75852001_75861745_75861781_75879878_75880041_75888828_75888904_75911953_75912040_75961443_75961550_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_34985.known	chr11	+	3152	9	FSM	ENSG00000198382.9	ENST00000531818.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	24.6294412238686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACCTGATTTTTTTTTA	NA	False	NA	4	True	AATAAA	-17	NA	75979525	76142651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75980039_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_34987.nic	chr11	+	865	7	ISM	ENSG00000198382.9	ENST00000356136.8	5117	15	-21	182736	-21	-53	5prime_fragment	FALSE	canonical	3	75	junction_6	10.4029910228848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAAAGGAAATTGAAGAA	-30	True	NA	NA	False	ATTAAA	-26	NA	75815188	75961496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_75815525_75851882_75852001_75861745_75861781_75879878_75880041_75888828_75888904_75911953_75912040_75961443
transcript_34990.known	chr11	-	882	6	FSM	ENSG00000137492.9	ENST00000528993.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	68.9132788365203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGTTTGAGACAACAGCA	125	False	NA	NA	False	GATAAA	-24	NA	76380971	76352497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76352795_76355617_76355655_76360955_76361064_76364337_76364433_76365851_76365973_76380747
transcript_34992.known	chr11	-	3490	5	FSM	ENSG00000137492.9	ENST00000260045.8	3490	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	11.7340317027013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGGCACATTATTTTTT	-36	True	NA	-14	True	AATAAA	-19	NA	76381132	76349955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76352795_76355617_76355655_76360955_76361064_76365851_76365973_76380747
transcript_34996.known	chr11	+	5444	2	FSM	ENSG00000179240.13	ENST00000529331.2	5444	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTTACTGGGAG	-10	True	NA	NA	False	ATTAAA	-21	NA	76381322	76408132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76382294_76403659
transcript_34997.known	chr11	-	599	2	FSM	ENSG00000255135.5	ENST00000530759.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGTTCCCCTTTGCTG	100	False	NA	NA	False	AATAAA	-21	NA	76444574	76441337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76441640_76444277
transcript_34998.known	chr11	-	738	2	FSM	ENSG00000255135.5	ENST00000572035.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTTTTAAAAAAGAAAT	18	True	NA	NA	False	AATAAA	-5	NA	76444656	76441353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76441640_76444204
transcript_35.known	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00096_+_0_1100
transcript_35003.known	chr11	+	934	4	FSM	ENSG00000158636.16	ENST00000533988.5	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTCTGATCATTATAA	-7	True	NA	NA	False	AATAAA	-23	NA	76445021	76453931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313
transcript_35005.known	chr11	-	4207	3	FSM	ENSG00000137507.11	ENST00000260061.9	4207	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGCCAGCTTCCTC	-2	True	NA	NA	False	ATTAAA	-20	NA	76670747	76657523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76661509_76665870_76665959_76670613
transcript_35006.known	chr11	-	2656	4	FSM	ENSG00000137507.11	ENST00000404995.5	2656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGCTGCCAGCTTC	-2	True	NA	NA	False	ATTAAA	-17	NA	76670747	76657526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76658035_76659582_76661509_76665870_76665959_76670613
transcript_35007.known	chr11	+	2585	2	FSM	ENSG00000182704.8	ENST00000333090.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTACTCAGCCAGT	-1	True	NA	29	True	AATAAA	-15	NA	76783355	76798144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76783405_76795608
transcript_35009.known	chr11	+	542	2	FSM	ENSG00000182704.8	ENST00000525167.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGCTACCTGGAGTCG	0	True	NA	NA	False	NA	NA	NA	76784147	76795932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76784366_76795608
transcript_35010.known	chr11	+	4495	12	FSM	ENSG00000078124.13	ENST00000679754.1	4495	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	46.7878984141896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	NA	False	NA	NA	False	NA	NA	NA	76860858	77023879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77015638_77015660_77016674_77016780_77019730_77019777_77020273
transcript_35012.known	chr11	+	7333	11	FSM	ENSG00000078124.13	ENST00000532485.6	7333	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	13.0479883506999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTAGTGTTTCATCC	-2	True	NA	NA	False	ATTAAA	-26	NA	76860917	77026797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_35017.known	chr11	+	1292	10	FSM	ENSG00000078124.13	ENST00000531461.5	1292	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	35.6152277045149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGTAAAAAAAGAGAGAG	16	True	NA	NA	False	NA	NA	NA	76860935	77020827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_35018.known	chr11	+	1695	6	FSM	ENSG00000078124.13	ENST00000530182.6	1695	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	9.56242647030554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTGACAGAATGAAACTC	15	True	NA	NA	False	NA	NA	NA	76860934	76991789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538
transcript_35020.known	chr11	+	2805	14	FSM	ENSG00000149260.18	ENST00000456580.6	2805	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.4631257371315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGGCCTCGCC	-1	True	NA	-23	True	AATAAA	-43	NA	77066992	77124495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77067095_77084851_77085052_77087941_77088062_77093681_77093814_77112588_77112798_77114241_77114435_77115394_77115589_77116225_77116304_77118156_77118353_77119029_77119153_77120712_77120910_77121933_77122050_77122575_77122713_77123687
transcript_35024.known	chr11	+	4367	13	FSM	ENSG00000149260.18	ENST00000648180.1	4367	13	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	19.6885471502823	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCCTGTGTCCCTCTG	6	True	NA	24	True	AATAAA	-20	NA	77066970	77126155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77067095_77084851_77085052_77093681_77093814_77112588_77112798_77114241_77114435_77115394_77115589_77116225_77116304_77118156_77118353_77119029_77119153_77120712_77120910_77121933_77122050_77122575_77122713_77123687
transcript_3503.known	chr1	-	2770	16	FSM	ENSG00000116809.12	ENST00000375733.6	2770	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	18.4190722410827	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	NA	False	NA	-5	True	AATAAA	-15	NA	15976132	15941870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15942253_15942330_15942442_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_35046.known	chr11	+	1849	11	FSM	ENSG00000137474.23	ENST00000409893.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	2.2561028345357	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTCCCAGTGCATA	226	False	NA	14	True	AATAAA	-29	NA	77174755	77184996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77174915_77175371_77175465_77177548_77177644_77179044_77179130_77179734_77179954_77180373_77180482_77181379_77181590_77181950_77182155_77182423_77182601_77183067_77183158_77184587
transcript_35049.nic	chr11	-	3250	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	218.695485905758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTATTGGAGTATGCCT	NA	False	NA	-11	True	AATAAA	-13	NA	77412063	77322021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_35050.known	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	225.910503420172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-2	True	NA	6	True	NA	NA	NA	77474060	77322947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_35051.nic	chr11	-	2223	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	218.695485905758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-21	True	NA	6	True	NA	NA	NA	77411962	77322947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_35054.nic	chr11	-	3206	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	322	junction_14	106.156507486035	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	NA	False	NA	-6	True	AATAAA	-18	NA	77412063	77322016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_35055.known	chr11	-	3459	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_14	124.555044794153	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-1	True	NA	-6	True	AATAAA	-18	NA	77474094	77322016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_35056.nic	chr11	-	2322	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	1	47	combination_of_known_junctions	FALSE	canonical	3	322	junction_14	106.156507486035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTGTAATCAATTGAG	NA	False	NA	-20	True	TATAAA	-21	NA	77412063	77322900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_35058.nic	chr11	-	2188	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	-56	-24	combination_of_known_junctions	FALSE	canonical	3	322	junction_14	106.156507486035	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACCTCCTTCATAACC	26	False	NA	-18	True	AATAAA	-27	NA	77412000	77322971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_35073.known	chr11	-	3001	15	FSM	ENSG00000149269.10	ENST00000530617.5	3001	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	195.950222750367	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	NA	False	NA	-6	True	AATAAA	-18	NA	77412064	77322016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77323155_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_35075.known	chr11	-	2982	7	FSM	ENSG00000074201.9	ENST00000525428.6	2982	7	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_4	69.1795168785932	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGAAAATACAAAAATTAG	1	True	NA	NA	False	NA	NA	NA	77637794	77614529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_35076.known	chr11	-	1121	6	FSM	ENSG00000074201.9	ENST00000525064.5	1121	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	379.680075853343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	0	True	NA	-1	True	NA	NA	NA	77637772	77616194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77616696_77619605_77619696_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_35078.known	chr11	+	1835	3	FSM	ENSG00000178301.4	ENST00000313578.4	1835	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGAAGGCTTCTTTTA	-3	True	NA	NA	False	TTTAAA	-19	NA	77589952	77610356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77590612_77603555_77603673_77609297
transcript_3508.nnic	chr1	-	2533	15	NIC	ENSG00000116809.12	novel	2770	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	20.892948717748	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	14	False	15976119	-5	True	AATAAA	-15	NA	15976105	15941870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15948290_15948498_15973038_15973126_15975982
transcript_35080.known	chr11	-	2107	6	FSM	ENSG00000048649.14	ENST00000528095.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.3775932065525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTCAAATATAAGTTG	17	True	NA	NA	False	NA	NA	NA	77820711	77701118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_35086.nic	chr11	-	1026	5	ISM	ENSG00000048649.14	ENST00000528095.5	2107	6	-324	24454	-166	0	5prime_fragment	FALSE	canonical	3	151	junction_4	5.61248608016091	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	NA	False	NA	-38	True	NA	NA	NA	77821035	77725572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_35087.known	chr11	-	520	2	FSM	ENSG00000048649.14	ENST00000530604.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGAGGTGAAAGTCACC	313	False	NA	NA	False	NA	NA	NA	77820699	77813353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77813702_77820527
transcript_35089.known	chr11	-	3146	23	FSM	ENSG00000149262.17	ENST00000534064.6	3146	23	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_14	17.6581402575518	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	2	True	NA	-1	True	AATAAA	-17	NA	77994668	77878719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_35093.known	chr11	+	579	5	FSM	ENSG00000087884.15	ENST00000526415.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	119.981248534927	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	-16	True	NA	27	True	AATAAA	-15	NA	77821128	77872352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77821242_77841018_77841061_77842478_77842629_77869721_77869818_77872174
transcript_35097.known	chr11	+	421	4	FSM	ENSG00000087884.15	ENST00000525409.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	51.1881062574327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	42	False	NA	27	True	AATAAA	-15	NA	77821186	77872352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77821238_77841018_77841061_77842478_77842629_77872174
transcript_35098.known	chr11	+	531	4	FSM	ENSG00000087884.15	ENST00000393427.7	522	4	0	-9	0	7	multi-exon	FALSE	canonical	3	215	junction_1	70.7876323158847	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACTCACCATTCTCCA	-1	True	NA	36	True	AATAAA	-24	NA	77821143	77872361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77872174
transcript_35102.known	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3673	junction_1	265	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-6	True	NA	1	True	AATAAA	-19	NA	78079862	78068296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78070037_78072997_78073142_78079578
transcript_35103.known	chr11	-	1673	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCAGTTTTGGTTCTGCT	-27	True	NA	-5	True	AATAAA	-15	NA	78023276	78015714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78017271_78023159
transcript_35104.known	chr11	-	422	2	FSM	ENSG00000151366.13	ENST00000534029.5	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCTGACTCTTTATTG	4816	False	NA	-16	True	ATTAAA	-13	NA	78079819	78069855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78070037_78079578
transcript_35107.known	chr11	-	1667	14	FSM	ENSG00000159063.14	ENST00000532440.6	1667	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	253.697532250163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-15	True	NA	-34	True	AAGAAA	-7	NA	78139626	78100963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78107716_78107765_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_35111.known	chr11	-	2479	14	FSM	ENSG00000159063.14	ENST00000680829.1	2479	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	271.526868351341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAGATATGTGCCAAGC	-6	True	NA	-24	True	AATAAA	-6	NA	78139617	78100953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
transcript_35112.known	chr11	-	1677	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	233.976127847195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCCAAGCAATTATT	19	True	NA	-17	True	AATAAA	-13	NA	78139592	78100946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_35113.known	chr11	-	2387	13	FSM	ENSG00000159063.14	ENST00000681351.1	2387	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	249.387068073351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-15	True	NA	-16	True	AATAAA	-14	NA	78139626	78100945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
transcript_35114.known	chr11	-	1637	13	FSM	ENSG00000159063.14	ENST00000680866.1	1637	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	191.189460280169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139660	78100945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_35115.known	chr11	-	2053	13	FSM	ENSG00000159063.14	ENST00000530910.6	2053	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	184.665012026281	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	353	False	NA	-16	True	AATAAA	-14	NA	78139258	78100945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
transcript_35117.known	chr11	-	1636	13	FSM	ENSG00000159063.14	ENST00000680256.1	1636	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	196.481692672767	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-11	True	NA	-16	True	AATAAA	-14	NA	78139622	78100945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127440_78139493
transcript_35118.known	chr11	-	1605	13	FSM	ENSG00000159063.14	ENST00000680761.1	1605	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	193.792343043326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-8	True	NA	-6	True	AATAAA	-24	NA	78139619	78100935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139528
transcript_35120.known	chr11	-	1471	12	FSM	ENSG00000159063.14	ENST00000529139.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	201.55589016326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-13	True	NA	-6	True	AATAAA	-24	NA	78139624	78100935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_35121.known	chr11	-	1566	12	FSM	ENSG00000159063.14	ENST00000525783.6	1566	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	200.611091212214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-13	True	NA	-6	True	AATAAA	-24	NA	78139624	78100935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78139493
transcript_35126.known	chr11	-	1202	8	FSM	ENSG00000159063.14	ENST00000530454.6	1202	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_4	47.1467530857705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTAATTTTTGCCTTA	-15	True	NA	NA	False	AATAAA	-17	NA	78139626	78112383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_35129.known	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	196.481692672767	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139644	78100945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
transcript_35130.known	chr11	-	3389	2	FSM	ENSG00000188997.8	ENST00000340067.4	3389	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTCTTTTGTGTCTG	-5	True	NA	NA	False	TATAAA	-11	NA	78188626	78171248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78174584_78188572
transcript_35135.known	chr11	+	4725	11	FSM	ENSG00000118369.13	ENST00000529308.6	4725	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	6.13188388670236	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGAGAACGGGTTCC	8	True	NA	NA	False	AATAAA	-18	NA	78188918	78215232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_78189158_78196235_78196919_78197935_78198069_78199594_78199725_78200132_78200235_78200649_78200809_78205841_78206036_78207529_78207624_78208856_78208964_78209447_78210745_78213645
transcript_35139.known	chr11	+	2419	6	FSM	ENSG00000118369.13	ENST00000530267.5	2419	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.85437744847146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCCTGGTTAACTTGA	9	False	NA	NA	False	ATTAAA	-12	NA	78188811	78214026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_78189158_78205841_78206036_78207529_78207624_78208856_78208964_78209447_78210745_78213645
transcript_35141.known	chr11	-	6110	10	FSM	ENSG00000033327.13	ENST00000361507.5	6110	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	2.9606472432165	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCCGTGTCCATCTT	-3	True	NA	-4	True	AATAAA	-25	NA	78417820	78215292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78219416_78220318_78220445_78221676_78221780_78222104_78222196_78223411_78223677_78225107_78225203_78226464_78227052_78250156_78250401_78280600_78280902_78417645
transcript_35150.known	chr11	-	2512	14	FSM	ENSG00000137513.10	ENST00000281038.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_13	60.159256101406	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-45	True	NA	NA	False	AATAAA	-21	NA	78574864	78435967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
transcript_35151.nic	chr11	-	2031	14	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_13	153.732457988069	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-45	True	NA	NA	False	AATAAA	-21	NA	78574864	78435967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_35153.nic	chr11	-	1776	14	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_13	153.732457988069	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	-45	True	NA	27	True	GATAAA	-15	NA	78574864	78436222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_35171.nic	chr11	-	2162	6	ISM	ENSG00000149256.16	ENST00000278550.12	14381	34	-22	411104	-22	666	5prime_fragment	FALSE	canonical	0	0	junction_3	7.73045923603508	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAATGATTAAAACTTGA	-3	False	NA	NA	False	AATAAA	-30	NA	79441052	79063932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_79065008_79069721_79070010_79148709_79148807_79215807_79215910_79297487_79297544_79440508
transcript_35174.known	chr11	-	3489	9	FSM	ENSG00000137509.12	ENST00000313010.8	3489	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	19.4899814007094	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAGACTTGAGTGCT	-2	True	NA	-7	True	AATAAA	-30	NA	82900430	82822935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_35175.known	chr11	-	3333	9	FSM	ENSG00000137509.12	ENST00000680566.1	3333	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	121.433559508894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	NA	False	NA	-115	True	AATATA	-37	NA	82901740	82823043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901592
transcript_35177.known	chr11	-	1420	8	FSM	ENSG00000137509.12	ENST00000531283.2	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	17.2626765016321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTTTTCCTATGCCT	-2	True	NA	NA	False	AATATA	-27	NA	82900430	82838268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_35180.known	chr11	+	3524	6	FSM	ENSG00000165490.13	ENST00000533655.6	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	14.4692777981487	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTTTTTAATTGTT	-8	True	NA	19	True	AATAAA	-18	NA	82901735	82934659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82930156_82930275_82931731
transcript_35181.known	chr11	-	9859	5	FSM	ENSG00000137502.10	ENST00000527633.6	9859	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	4.15331193145904	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAATCATATGCCAT	22	False	83071919	NA	False	AATAAA	-19	NA	83071897	82973132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_82982416_82987586_82987771_82994038_82994123_82997223_82997325_83071690
transcript_35186.known	chr11	+	2467	3	FSM	ENSG00000246067.9	ENST00000656330.1	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCCGGGCAATAACAGCA	NA	False	NA	NA	False	NA	NA	NA	83072051	83075492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83072147_83072622_83072805_83073302
transcript_35188.known	chr11	+	563	3	FSM	ENSG00000246067.9	ENST00000501011.8	572	3	6	3	0	0	multi-exon	FALSE	canonical	3	38	junction_1	55	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGTGTCATGTTT	18	True	NA	5	True	NA	NA	NA	83072102	83073604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83072182_83072622_83072805_83073302
transcript_35189.known	chr11	+	597	2	FSM	ENSG00000246067.9	ENST00000534499.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAACCAAAGTTAATT	37	False	NA	NA	False	GATAAA	-19	NA	83072121	83073194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83072147_83072622
transcript_35193.known	chr11	+	7677	16	FSM	ENSG00000165494.12	ENST00000298281.8	7677	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	34.6053303537026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCTGGTGCAATGGGT	NA	False	NA	NA	False	NA	NA	NA	83156987	83187451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167506_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
transcript_35202.known	chr11	-	1986	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	291.294953612314	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGTTGTGTGGGTTTT	1	True	NA	-27	True	TATAAA	-16	NA	83285998	83261461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
transcript_35203.known	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_8	227.739674573843	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-1	True	NA	-21	True	TATAAA	-22	NA	83286351	83261455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
transcript_35204.known	chr11	-	4014	9	FSM	ENSG00000137500.10	ENST00000529689.6	3990	9	-40	16	-17	-16	multi-exon	FALSE	canonical	3	629	junction_8	147.343932263938	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGTTGACCTTAATCCA	NA	False	NA	NA	False	AATAAA	-14	NA	83286407	83259096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285872
transcript_35208.known	chr11	-	1550	9	FSM	ENSG00000137500.10	ENST00000455220.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	322.40151112394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGTGGATCACTTGAGG	-5	True	NA	42	True	NA	NA	NA	83286390	83261316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83286099
transcript_35210.nic	chr11	-	1796	8	NIC	ENSG00000137500.10	novel	1919	9	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_6	329.132626329092	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	18	True	NA	-21	True	TATAAA	-22	NA	83286332	83261455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
transcript_35211.known	chr11	-	1053	8	FSM	ENSG00000137500.10	ENST00000529745.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_6	281.720443282459	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	175	False	NA	-20	True	ACTAAA	-27	NA	83286210	83261756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285872
transcript_35217.nic	chr11	-	1702	8	NIC	ENSG00000137500.10	novel	1053	8	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_6	329.132626329092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	NA	False	NA	-20	True	ACTAAA	-27	NA	83286539	83261756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
transcript_35227.known	chr11	+	4066	6	FSM	ENSG00000137494.14	ENST00000393389.7	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	15.8113883008419	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGATACATTGTTTT	-9	True	NA	6	True	AATAAA	-17	NA	83193738	83215200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83212652
transcript_35239.known	chr11	-	628	4	FSM	ENSG00000137500.10	ENST00000526631.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_3	92.3483742261997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATAAGAGTTACATTTT	5	True	NA	NA	False	TATAAA	-23	NA	83285978	83274442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83274741_83278725_83278830_83280140_83280261_83285872
transcript_35240.known	chr11	-	549	3	FSM	ENSG00000247137.9	ENST00000528524.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTAGTAGATAAATT	810	False	NA	1	True	NA	NA	NA	83193794	83191028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83191169_83192735_83192817_83193466
transcript_35242.known	chr11	+	1720	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	1	True	NA	14	True	AATAAA	-15	NA	83157159	83158879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83157200_83158900
transcript_35243.known	chr11	-	723	8	FSM	ENSG00000137500.10	ENST00000534753.5	723	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	358.454790363714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGACAATTCGTTATCT	-5	True	NA	NA	False	AAAACA	-19	NA	83285988	83265889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274764_83278725_83278830_83280140_83280261_83285872
transcript_35252.known	chr11	+	1149	6	FSM	ENSG00000171204.13	ENST00000529197.1	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	184.574537788938	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	9	True	NA	20	True	AATAAA	-34	NA	85628604	85636510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_35254.known	chr11	+	820	6	FSM	ENSG00000171204.13	ENST00000531477.5	820	6	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	314.298329616942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATACATGAAGAGTAAC	-3	True	NA	NA	False	ATTAAA	-43	NA	85628592	85636210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85629131_85629263_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_35261.known	chr11	+	1015	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	135.511069658534	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	-3	True	NA	46	True	AATAAA	-43	NA	85628592	85636536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_35263.known	chr11	+	1273	4	FSM	ENSG00000171204.13	ENST00000534341.1	1273	4	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	143.810832538984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	6	True	NA	46	True	AATAAA	-43	NA	85628601	85636536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666
transcript_35264.known	chr11	+	853	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	303.611959945952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	8	True	NA	17	True	AATAAA	-31	NA	85628603	85636507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
transcript_35267.known	chr11	+	722	5	FSM	ENSG00000171202.7	ENST00000531366.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	111.600571235097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATGTTATGTCTAAT	10	True	NA	22	True	AATAAA	-18	NA	85647986	85656547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654235_85655593_85655709_85656308
transcript_35268.known	chr11	+	759	5	FSM	ENSG00000171202.7	ENST00000304511.7	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	19.0180834996589	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	-10	True	NA	17	True	AATAAA	-13	NA	85647966	85656542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654257_85655593_85655709_85656308
transcript_35271.known	chr11	+	656	4	FSM	ENSG00000171202.7	ENST00000528105.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	119.978701813651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	0	True	NA	17	True	AATAAA	-13	NA	85647976	85656542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85648090_85654062_85654257_85655593_85655709_85656308
transcript_35273.known	chr11	-	898	5	FSM	ENSG00000137504.15	ENST00000527529.6	898	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	152.076255543066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	918	False	NA	NA	False	AATAGA	-44	NA	85664189	85660334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85660598_85661636_85661750_85662388_85662458_85663523_85663602_85663814
transcript_35277.known	chr11	-	1431	4	FSM	ENSG00000137504.15	ENST00000260058.9	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	96.2219656142331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTATTTATTTCCTGG	454	False	NA	NA	False	NA	NA	NA	85664653	85660152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85660598_85662388_85662458_85663523_85663602_85663814
transcript_35281.known	chr11	-	2850	4	FSM	ENSG00000137504.15	ENST00000525639.1	2850	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	136.746318252286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	5	True	NA	NA	False	AATAGA	-44	NA	85665102	85660334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85661750_85662388_85662458_85663523_85663602_85663814
transcript_35284.nic	chr11	-	1478	3	ISM	ENSG00000137504.15	ENST00000525639.1	2850	4	-30	2041	-3	-423	5prime_fragment	FALSE	canonical	3	320	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAAAAAGAGGTAATAT	-25	True	NA	NA	False	AAGAAA	-1	NA	85665132	85662375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_35285.known	chr11	-	2387	1	FSM	ENSG00000279742.1	ENST00000623909.1	2387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATACGAAAACCAG	-16	True	NA	NA	False	NA	NA	NA	85854943	85852556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85852600_85854900
transcript_35288.known	chr11	-	3474	20	FSM	ENSG00000073921.18	ENST00000532317.5	3474	20	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	25.0165596125376	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	22	True	NA	-21	True	AATAAA	-18	NA	86069059	85957683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_35289.known	chr11	-	4134	20	FSM	ENSG00000073921.18	ENST00000393346.8	4134	20	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_3	44.7789894340732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAGTTGTACTTTTAT	-3	True	NA	27	True	ATTAAA	-16	NA	86069084	85957174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_35292.known	chr11	-	3613	20	FSM	ENSG00000073921.18	ENST00000526033.5	3613	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	49.5850929256285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGTTATGGTATT	-16	True	NA	-25	True	AATAAA	-14	NA	86069097	85957687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990379_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_35293.known	chr11	+	1696	13	FSM	ENSG00000074266.22	ENST00000351625.10	1696	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	132.10756875449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTTTTTGTAGTTCT	7	True	NA	89	True	AATAAA	-23	NA	86245222	86278813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86270082_86270158_86276979_86277139_86277917_86277992_86278398
transcript_35296.known	chr11	+	1791	12	FSM	ENSG00000074266.22	ENST00000673233.2	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_2	48.8764676598984	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTGTTTTTTGTAGT	181	False	NA	86	True	AATAAA	-20	NA	86245049	86278810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979_86277139_86277917_86277992_86278398
transcript_35302.known	chr11	+	1745	10	FSM	ENSG00000074266.22	ENST00000528180.5	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	117.429674252557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCTTTTAATAAAAATT	-26	True	NA	-17	True	NA	NA	NA	86244752	86278707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86276979_86277139_86277917_86277992_86278398
transcript_35316.known	chr11	+	1108	5	FSM	ENSG00000149196.17	ENST00000278483.8	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_4	153.389007102856	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCATGTGTAATCATT	4	True	NA	29	True	AATAAA	-30	NA	86302239	86345943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602_86344722_86345583
transcript_35321.known	chr11	+	1694	4	FSM	ENSG00000149196.17	ENST00000533986.5	1694	4	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_2	60.4041941148681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAAATAATTTTTA	NA	False	NA	-13	True	AAAACA	-4	NA	86302210	86345638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602
transcript_35323.known	chr11	+	715	4	FSM	ENSG00000149196.17	ENST00000531485.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	398.420213677302	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATTGAAAAATGAAAA	7	True	NA	NA	False	ATTAAA	-19	NA	86302242	86345791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86302479_86337378_86337531_86344602_86344722_86345583
transcript_35329.nnic	chr11	+	816	3	NNC	ENSG00000149201.10	novel	2510	14	NA	NA	3025	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.5	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGCATGACAATTCA	NA	False	NA	16	True	AATAAA	-16	NA	86422100	86423106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_86422301_86422388_86422472_86422573
transcript_35332.nnic	chr11	+	878	2	NNC	ENSG00000149201.10	novel	2510	14	NA	NA	3051	0	at_least_one_novel_splicesite	FALSE	canonical	3	209	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGCATGACAATTCA	NA	False	NA	16	True	AATAAA	-16	NA	86422126	86423106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_86422472_86422573
transcript_35337.known	chr11	-	2311	15	FSM	ENSG00000151376.18	ENST00000543262.5	2311	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2.54850896784447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCCTGGGAGTTCACTT	-1	True	NA	86	True	AATAAA	-14	NA	86672636	86441109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_86441441_86442820_86442920_86446313_86446488_86447064_86447208_86448149_86448256_86449888_86450003_86450300_86450399_86465090_86465201_86487336_86487441_86497962_86498125_86508791_86508868_86556552_86556703_86559689_86559824_86671761_86671959_86672323
transcript_35340.known	chr11	-	2240	14	FSM	ENSG00000151376.18	ENST00000393324.7	2240	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2.64463283656478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGGAGTTCACTTTT	437	False	NA	88	True	AATAAA	-16	NA	86672198	86441107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_86441441_86442820_86442920_86446313_86446488_86447064_86447208_86448149_86448256_86449888_86450003_86450300_86450399_86465090_86465201_86487336_86487441_86497962_86498125_86508791_86508868_86556552_86556703_86559689_86559824_86671761
transcript_35341.known	chr11	+	3713	2	FSM	ENSG00000150687.12	ENST00000280258.6	3713	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTTTCTCATATAAT	-1	True	NA	7	True	AATAAA	-18	NA	86800541	86811233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86800652_86807630
transcript_35345.known	chr11	-	7387	2	FSM	ENSG00000174804.4	ENST00000531380.2	7387	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTGTGTGACTTGGCAT	1	True	NA	-11	True	AATAAA	-14	NA	86955395	86945678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_86952471_86954800
transcript_35347.known	chr11	+	1226	3	FSM	ENSG00000246523.9	ENST00000499504.8	1226	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	NA	False	NA	NA	False	AATATA	-43	NA	86955615	87000959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86955713_86957981_86958027_86999875
transcript_35348.known	chr11	+	8980	15	FSM	ENSG00000166575.17	ENST00000305494.6	8980	15	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	21.2396433345664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTAGATCTCCTTT	-1	True	NA	11	True	AATAAA	-19	NA	87037933	87328824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_35352.known	chr11	+	3938	14	FSM	ENSG00000166575.17	ENST00000340353.11	3938	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	58.4516185915868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTCTCAAATCTATT	-20	True	NA	46	True	AGTAAA	-20	NA	87037843	87323758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_35362.nic	chr11	-	1349	2	ISM	ENSG00000285835.1	ENST00000649399.1	837	4	-266	106597	-266	-106597	5prime_fragment	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAACACAGATTCCAT	NA	False	NA	NA	False	AGTAAA	-17	NA	88045874	87953855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_87954907_88045576
transcript_35366.known	chr11	-	1432	3	FSM	ENSG00000123892.12	ENST00000243662.11	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	17	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	29	True	NA	-13	True	AATAAA	-25	NA	88175443	88113250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88114141_88149674_88149956_88175182
transcript_35367.known	chr11	-	1007	3	FSM	ENSG00000123892.12	ENST00000526372.1	1007	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	48.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTTTTCCAGATTT	38	True	NA	NA	False	NA	NA	NA	88175434	88113611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88114141_88149674_88149956_88175237
transcript_35368.known	chr11	-	1957	8	FSM	ENSG00000109861.17	ENST00000677802.1	1957	8	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_5	710.138905641792	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	0	True	NA	-6	True	AATAAA	-19	NA	88337738	88293591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88328111_88328197_88334936_88335083_88337500
transcript_35371.known	chr11	-	1870	7	FSM	ENSG00000109861.17	ENST00000227266.10	1870	7	0	0	0	0	multi-exon	FALSE	canonical	3	1401	junction_2	190.859168556877	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	2	True	NA	-6	True	AATAAA	-19	NA	88337736	88293591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_35372.known	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	565.648718041703	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-2	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
transcript_35373.known	chr11	-	2774	7	FSM	ENSG00000109861.17	ENST00000679224.1	2774	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	564.918504447028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTTTTTTTTCACTA	392	False	NA	NA	False	TATAAA	-18	NA	88337749	88292493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337707
transcript_35374.known	chr11	-	1867	7	FSM	ENSG00000109861.17	ENST00000678506.1	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	625.0039999872	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-4	True	NA	-6	True	AATAAA	-19	NA	88337772	88293591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312426_88312555_88334936_88335083_88337500
transcript_35375.known	chr11	-	1802	7	FSM	ENSG00000109861.17	ENST00000678395.1	1802	7	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_4	614.672654526149	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	8	True	NA	-6	True	AATAAA	-19	NA	88337730	88293591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312449_88312555_88334936_88335083_88337500
transcript_35377.known	chr11	-	1667	7	FSM	ENSG00000109861.17	ENST00000678464.1	1667	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	603.530906876819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGCTTAATCATTTGT	2	True	NA	39	True	NA	NA	NA	88337736	88293761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294476_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_35383.known	chr11	-	1431	6	FSM	ENSG00000109861.17	ENST00000678915.1	1431	6	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_1	641.204366797357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTAGACTTTCAGCAG	-12	True	NA	-142	True	NA	NA	NA	88337780	88293942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_35387.known	chr11	-	900	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	807.838280536395	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	416	False	NA	-23	True	AATAAA	-16	NA	88337725	88326087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
transcript_35388.known	chr11	-	778	4	FSM	ENSG00000109861.17	ENST00000529974.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	880.852238838425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	5	True	NA	-21	True	AATAAA	-18	NA	88337733	88326085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326400_88328111_88328197_88334936_88335083_88337500
transcript_35389.known	chr11	-	6144	4	FSM	ENSG00000109861.17	ENST00000524463.6	6144	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	873.209533210036	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTATTGTTTTATT	-12	True	NA	NA	False	AATAAA	-33	NA	88337780	88320810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337500
transcript_35391.known	chr11	-	724	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	903.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	419	False	NA	-23	True	AATAAA	-16	NA	88337722	88326087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326444_88334936_88335083_88337500
transcript_35393.known	chr11	-	4269	18	FSM	ENSG00000086991.13	ENST00000263317.9	4269	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	4.21399875025231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCCTTGAAGTTTCTA	-8	True	NA	NA	False	AATAAA	-15	NA	89491375	89324352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_89326877_89335844_89335946_89337446_89337516_89340062_89340172_89342073_89342194_89354961_89355044_89373431_89373493_89400016_89400080_89400214_89400380_89402325_89402543_89421901_89421983_89432783_89432857_89440687_89440716_89444134_89444233_89449439_89449525_89451784_89451896_89490457_89490554_89491189
transcript_35395.known	chr11	-	2156	17	FSM	ENSG00000086991.13	ENST00000534731.5	2156	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	4.5134348062202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTCCAGGCAAATATAT	1	True	NA	NA	False	TATAAA	-21	NA	89491328	89326298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_89326877_89335844_89335946_89337446_89337516_89340062_89340172_89354961_89355044_89373431_89373493_89400016_89400080_89400214_89400380_89402325_89402543_89421901_89421983_89432783_89432857_89440687_89440716_89444134_89444233_89449439_89449525_89451784_89451896_89490457_89490554_89491189
transcript_35397.known	chr11	+	3466	19	FSM	ENSG00000077616.11	ENST00000534061.6	3466	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.51539822656808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACGAGTTAAGAATTA	-10	True	NA	NA	False	AATAAA	-22	NA	90134662	90192894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
transcript_35399.known	chr11	+	3035	18	FSM	ENSG00000077616.11	ENST00000321955.8	3035	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	5.29281029609505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGCAAGGAAACCAGAAT	39	False	NA	NA	False	AATAAA	-19	NA	90134711	90192611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
transcript_35401.known	chr11	+	1504	7	FSM	ENSG00000077616.11	ENST00000529090.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.8151743807532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATAACTGATATTTCTT	-9	True	NA	NA	False	AGTAAA	-16	NA	90134663	90158757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144
transcript_35402.known	chr11	-	1136	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	182.457467023762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGGAGATGGAAGGAAG	269	False	NA	37	True	AAAAAG	-32	NA	90223030	90202406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_35403.known	chr11	-	3070	11	FSM	ENSG00000110172.12	ENST00000320585.11	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_10	65.7096644337802	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTCTTTTTTAGC	-3	True	NA	0	True	AATAAA	-30	NA	90223049	90200428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_35406.nic	chr11	-	588	5	ISM	ENSG00000110172.12	ENST00000525317.5	1136	12	-80	8809	-33	-645	5prime_fragment	FALSE	canonical	3	392	junction_4	57.8678451300893	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGATTTTATTTTGTTT	189	False	NA	NA	False	GATAAA	-37	NA	90223110	90211215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_35408.known	chr11	-	564	5	FSM	ENSG00000110172.12	ENST00000530765.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	212.352743095068	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTCATGCTATGAACT	-6	True	NA	NA	False	NA	NA	NA	90223077	90213308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90213421_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_35409.known	chr11	-	566	6	FSM	ENSG00000110172.12	ENST00000533772.5	566	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	234.748716716407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGACCTCATGTAAGAAT	-3	True	NA	NA	False	NA	NA	NA	90223049	90210570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90210592_90211214_90211336_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_35415.known	chr11	-	6037	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	29.6359578890239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTTTAGATAACATT	-22	True	NA	-5	True	AATAAA	-15	NA	93197991	93144173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
transcript_35427.known	chr11	-	747	2	FSM	ENSG00000180773.15	ENST00000527743.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATATTTAGGTAAAC	40	False	NA	NA	False	TATAAA	-3	NA	93197929	93185219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93185815_93197777
transcript_3543.known	chr1	-	2511	15	FSM	ENSG00000116809.12	ENST00000537142.5	2511	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	26.9171063126202	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	11	True	NA	-5	True	AATAAA	-15	NA	15976079	15941870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946317_15946934_15947124_15973038_15973126_15975982
transcript_35430.known	chr11	-	374	3	FSM	ENSG00000166002.7	ENST00000526869.1	374	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	6	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACGTGGCCACGCG	7	True	NA	NA	False	NA	NA	NA	93543355	93479048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93479270_93499275_93499349_93543275
transcript_35437.known	chr11	+	3622	13	FSM	ENSG00000042429.12	ENST00000638487.1	3622	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	59.7401781792529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCCTTTGTATTTC	NA	False	NA	-18	True	TTTAAA	-44	NA	93784241	93813268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794249_93794440_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_3544.known	chr1	+	3039	2	FSM	ENSG00000183888.4	ENST00000329454.2	3039	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACCAAAAAAGTA	0	True	NA	NA	False	NA	NA	NA	16004235	16008807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16004386_16005918
transcript_35443.known	chr11	+	1885	12	FSM	ENSG00000042429.12	ENST00000638790.1	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	67.1514878022043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAAAGAGTGCTGTTT	302	False	NA	NA	False	NA	NA	NA	93784675	93812150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794249_93794440_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_35444.known	chr11	+	5087	12	FSM	ENSG00000042429.12	ENST00000251871.9	5087	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	18.4610378190223	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAGTAAGTTCACTTT	-4	True	NA	NA	False	AATAAA	-17	NA	93784281	93814963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_35449.known	chr11	+	2317	11	FSM	ENSG00000042429.12	ENST00000639724.1	2317	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	47.1772190787037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAGTATGTGGTTT	21	False	NA	-13	True	TTTAAA	-24	NA	93784306	93812378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93811852
transcript_35451.known	chr11	+	3235	11	FSM	ENSG00000042429.12	ENST00000639189.1	3235	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	44.5089878563869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGGAGCTTGTGGG	7	True	NA	-6	True	AATAAA	-35	NA	93784292	93813307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_35453.known	chr11	+	2621	11	FSM	ENSG00000042429.12	ENST00000525026.6	2621	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	51.2391451919331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAATACCTTTTTTTC	7	True	NA	14	True	AATAAA	-19	NA	93784292	93812405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807500_93807636_93809716_93809877_93811852
transcript_35460.known	chr11	+	4163	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	26.6549127741961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	12	True	NA	NA	False	NA	NA	NA	93741671	93764749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_35465.known	chr11	+	4094	8	FSM	ENSG00000182919.15	ENST00000528288.5	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	69.0356311432505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	NA	False	NA	NA	False	NA	NA	NA	93741590	93764749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93759741_93759859_93761514
transcript_35467.known	chr11	+	2417	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	67.1629149371671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	NA	False	NA	29	True	AATAAA	-34	NA	93741593	93763102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
transcript_35468.known	chr11	+	2442	8	FSM	ENSG00000182919.15	ENST00000540113.5	2442	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	67.1234014365196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	NA	False	NA	29	True	AATAAA	-34	NA	93741593	93763102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_35472.known	chr11	-	1632	6	FSM	ENSG00000166012.17	ENST00000448108.7	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	26.081411004775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTAGCTGGGATTACA	-5	True	NA	NA	False	NA	NA	NA	93741495	93735566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_35474.nic	chr11	+	586	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-107	61500	-107	-26762	5prime_fragment	FALSE	canonical	2	13	junction_3	6.64997911442	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGATTTGAGGCATAAAGA	NA	False	NA	NA	False	AAGAAA	-2	NA	93661574	93668858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_35475.nic	chr11	+	638	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-107	61448	-107	-26710	5prime_fragment	FALSE	canonical	2	13	junction_3	6.64997911442	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTACTGAAACAAAAAACC	NA	False	NA	NA	False	CATAAA	-35	NA	93661574	93668910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_35480.nic	chr11	-	539	3	ISM	ENSG00000166012.17	ENST00000448108.7	1632	6	-51	2714	-51	-172	5prime_fragment	FALSE	canonical	3	194	junction_2	29	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGTACCAGCCAACAG	NA	False	NA	NA	False	TATAAA	-12	NA	93741546	93738280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_93738500_93739236_93739332_93741321
transcript_35482.known	chr11	+	2278	2	FSM	ENSG00000042429.12	ENST00000530819.1	2278	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	-4	True	NA	NA	False	NA	NA	NA	93784281	93789796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000
transcript_35485.known	chr11	+	1862	10	FSM	ENSG00000182919.15	ENST00000528099.5	1862	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.0570059359336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAAAATCAGTGT	-1	True	NA	NA	False	ATTAAA	-16	NA	93741658	93762303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93741962_93742095_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_35486.known	chr11	-	334	3	FSM	ENSG00000166012.17	ENST00000532235.1	334	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGTGAAGATTTAGAAAA	14	False	NA	NA	False	AATGAA	-2	NA	93741476	93737155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93737240_93739236_93739332_93741321
transcript_35487.known	chr11	-	3056	4	FSM	ENSG00000214376.6	ENST00000409977.2	3056	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGTCCTTTGTGTGTG	-18	True	NA	NA	False	AATAAA	-14	NA	93850618	93818231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93820613_93820742_93820884_93820996_93821324_93850411
transcript_35489.known	chr11	+	2750	5	FSM	ENSG00000110218.9	ENST00000436171.2	2750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	102.855481137371	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAATGTAAGCTTATTTC	47	True	NA	9	True	AATAAA	-21	NA	94128928	94181966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94129494_94153490_94153631_94178368_94178593_94179601_94180258_94180801
transcript_35493.nic	chr11	+	2836	2	ISM	ENSG00000110218.9	ENST00000227638.8	2852	5	-472	26767	-472	-26765	5prime_fragment	FALSE	canonical	3	251	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGTGTGGTACGGG	NA	False	NA	NA	False	AATACA	-5	NA	94128368	94155201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_94129494_94153490
transcript_35495.known	chr11	+	570	2	FSM	ENSG00000250519.7	ENST00000515097.2	570	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATATCGCTAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	94238149	94279206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94238278_94278764
transcript_35497.known	chr11	-	4277	4	FSM	ENSG00000123901.9	ENST00000243673.7	4277	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTCTTGGATTTGCA	2	True	NA	-5	True	AATAAA	-21	NA	94401419	94377315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94380774_94393484_94393619_94396398_94396525_94400860
transcript_35498.nic	chr11	-	2686	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_9	34.6251793799168	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	-4	True	NA	13	True	AATAAA	-31	NA	94493878	94419865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_35499.known	chr11	-	6841	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	60.7981082953999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-16	True	NA	-17	True	AATAAA	-35	NA	94493844	94415569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_3550.known	chr1	+	1777	14	FSM	ENSG00000184908.20	ENST00000684624.1	1777	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.64059541036247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTGTCTGGTTCCCAGT	9	True	NA	-38	True	NA	NA	NA	16048999	16057252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16049032_16049119_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055674_16055759_16056421_16056509_16056868
transcript_35501.known	chr11	-	2588	19	FSM	ENSG00000020922.13	ENST00000323977.7	2588	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	61.6524758446713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCATAATGAAAAACTATG	0	True	NA	3	True	AATAAA	-21	NA	94493874	94419875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_35510.known	chr11	-	2604	20	FSM	ENSG00000020922.13	ENST00000393241.8	2604	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	74.6238953805874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTCATAATGAAAAACTA	-20	True	NA	1	True	AATAAA	-19	NA	94493848	94419877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445891_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493720
transcript_35511.known	chr11	+	1908	3	FSM	ENSG00000168876.9	ENST00000544612.6	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	-6	True	NA	2	True	AATAAA	-20	NA	94493983	94499578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94494036_94496603_94496952_94498070
transcript_35512.known	chr11	+	3002	2	FSM	ENSG00000168876.9	ENST00000544253.1	3002	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	18	True	NA	1	True	AATAAA	-19	NA	94494007	94499577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94494036_94496603
transcript_35515.nic	chr11	+	3758	13	NIC	ENSG00000166025.18	novel	653	5	NA	NA	-27940	4379	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	36.6067692586433	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGATCATCCTTGGAATA	-46	True	NA	6	True	TATAAA	-15	NA	94740401	94871144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_94740989_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
transcript_35517.known	chr11	+	8980	13	FSM	ENSG00000166025.18	ENST00000433060.3	8980	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	27.259427523132	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTAATGTTTTGCTT	-16	True	NA	98	True	AATAAA	-18	NA	94768355	94876748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94768561_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
transcript_35520.nic	chr11	+	3132	12	ISM	ENSG00000166025.18	ENST00000433060.3	8980	13	-28	7091	-14	2892	5prime_fragment	FALSE	canonical	3	74	junction_2	28.0813458272761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTAGTTTATTACTATT	15	False	NA	4	True	AATAAA	-14	NA	94768327	94869657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_94768561_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197
transcript_35521.known	chr11	+	8844	12	FSM	ENSG00000166025.18	ENST00000317829.12	8844	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	36.4387859837144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTAATGTTTTGCTT	-30	True	NA	98	True	AATAAA	-18	NA	94768341	94876748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94768561_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
transcript_35526.nic	chr11	+	1951	6	ISM	ENSG00000166025.18	ENST00000433060.3	8980	13	-147	45207	-133	1392	5prime_fragment	FALSE	canonical	3	74	junction_2	29.2205407205274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTCCACTTATTTAT	178	False	NA	NA	False	NA	NA	NA	94768208	94831541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_94768561_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451
transcript_35529.known	chr11	-	1522	7	FSM	ENSG00000150316.12	ENST00000279839.8	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	36.2832223241297	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTATCTTGGAGGAT	5	True	NA	NA	False	AATAAA	-17	NA	94973556	94962619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_3553.nic	chr1	+	2222	13	ISM	ENSG00000184908.20	ENST00000683661.1	3970	17	2875	-20	-91	0	3prime_fragment	TRUE	canonical	3	13	junction_10	5.80887730594782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTCCATCCCTCAT	4860	False	NA	17	True	AATAAA	-13	NA	16048697	16057307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055674_16055759_16056421_16056509_16056868
transcript_35532.known	chr11	-	1113	6	FSM	ENSG00000150316.12	ENST00000621358.4	1113	6	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	36.9616016968962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAGACTGTAAAACGT	NA	False	NA	-53	True	ATTAAA	-21	NA	94973586	94963367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971488_94972054_94972194_94973497
transcript_35533.nic	chr11	-	534	5	ISM	ENSG00000150316.12	ENST00000279839.8	1522	7	-49	7392	-19	476	5prime_fragment	FALSE	canonical	3	670	junction_3	5.80409338312195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGAAGAGCAGGCCAGG	NA	False	NA	23	True	ATTAAA	-8	NA	94973605	94970011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_35534.known	chr11	-	905	4	FSM	ENSG00000150316.12	ENST00000539856.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGTGGGACCCTAG	-11	True	NA	NA	False	NA	NA	NA	94973572	94970487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94971066_94971374_94971488_94972054_94972194_94973497
transcript_35535.known	chr11	-	921	3	FSM	ENSG00000150316.12	ENST00000542165.1	921	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTTCATCTCTAATAA	15	True	NA	NA	False	NA	NA	NA	94973546	94970963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94971488_94972054_94972194_94973288
transcript_35537.known	chr11	+	2951	3	FSM	ENSG00000186280.7	ENST00000335080.6	2951	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTCAAATATTGTGT	17	True	NA	NA	False	ATTAAA	-25	NA	94973708	94999519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94974069_94975653_94975749_94997023
transcript_35539.known	chr11	+	560	2	FSM	ENSG00000263465.5	ENST00000638426.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAGAATAAAATTAGA	202	False	NA	-21	True	NA	NA	NA	95068057	95069088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95068184_95068654
transcript_3554.known	chr1	+	2058	13	FSM	ENSG00000184908.20	ENST00000683606.1	2058	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.45042733962148	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTCCATCCCTCAT	5	True	NA	17	True	AATAAA	-13	NA	16048849	16057307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052206_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_35545.known	chr11	+	4651	2	FSM	ENSG00000149218.5	ENST00000278505.5	4651	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTAGCAGTTCTGTAAA	4	True	NA	8	True	AATAAA	-15	NA	95089845	95132645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95090228_95128376
transcript_35547.known	chr11	-	2329	18	FSM	ENSG00000087053.20	ENST00000481642.6	2329	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_14	201.459226815761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGTAAGATCAGGGGC	348	False	NA	NA	False	NA	NA	NA	95924123	95835289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866402_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_35548.known	chr11	-	3536	18	FSM	ENSG00000087053.20	ENST00000675489.1	3536	18	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	194.260820640669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTGTCCAAAGTT	2	True	NA	-5	True	ATTAAA	-24	NA	95924093	95834091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_35550.known	chr11	-	3457	17	FSM	ENSG00000087053.20	ENST00000676261.1	3457	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	174.000359195032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTAAACTTTGTTCT	-3	True	NA	-16	True	ATTAAA	-13	NA	95924098	95834102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95914241_95914313_95923874
transcript_35551.known	chr11	-	4629	17	FSM	ENSG00000087053.20	ENST00000675196.1	4629	17	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_16	190.945836561052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	555	False	NA	-6	True	AATAAA	-16	NA	95923916	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_35552.known	chr11	-	3420	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	167.802897769973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	-1	True	NA	-1	True	ATTAAA	-28	NA	95924096	95834087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_35555.known	chr11	-	4632	16	FSM	ENSG00000087053.20	ENST00000676177.1	4632	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	177.88830453093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95923874
transcript_35556.known	chr11	-	4506	16	FSM	ENSG00000087053.20	ENST00000676440.1	4506	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_15	196.483711510366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	607	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923691
transcript_35557.known	chr11	-	4582	16	FSM	ENSG00000087053.20	ENST00000675320.1	4582	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	171.287464677237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923874
transcript_35558.known	chr11	-	4504	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	139.641668407233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	607	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
transcript_35559.known	chr11	-	3350	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_15	95.6050672762113	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-5	True	NA	-2	True	ATTAAA	-27	NA	95924100	95834088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
transcript_35564.known	chr11	-	4387	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_14	139.758702405107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	653	False	NA	-6	True	AATAAA	-16	NA	95923818	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
transcript_35565.known	chr11	-	4519	15	FSM	ENSG00000087053.20	ENST00000676388.1	4519	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	157.560613538966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865590_95865677_95888155_95888262_95923874
transcript_35574.known	chr11	-	4674	17	FSM	ENSG00000087053.20	ENST00000675362.1	4674	17	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_16	196.487237180943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914334_95923874
transcript_35579.known	chr11	+	3141	11	FSM	ENSG00000166037.11	ENST00000325542.10	3141	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	40.9336047765158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGGCTCTGAGTCCT	-4	True	NA	27	True	ATTAAA	-21	NA	95790497	95832693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_35584.known	chr11	-	3823	11	FSM	ENSG00000077458.13	ENST00000398187.6	3823	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	65.3730831458942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTAGTTTTCAATGG	1327	False	NA	-8	True	AATAAA	-16	NA	95789615	95768952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_35585.known	chr11	+	3098	10	FSM	ENSG00000166037.11	ENST00000325486.9	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	136.944433175569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	-41	True	NA	25	True	ATTAAA	-19	NA	95790460	95832691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95827785_95828028_95829186_95829332_95831025
transcript_35590.known	chr11	-	2546	10	FSM	ENSG00000077458.13	ENST00000536839.1	2546	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	52.8459209213416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTCTCTTAATAATTT	1381	False	NA	NA	False	TTTAAA	-29	NA	95789561	95770114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95771651_95775921_95776024_95778821_95778955_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_35591.known	chr11	-	3932	10	FSM	ENSG00000077458.13	ENST00000358780.10	3932	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	28.2270337105897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTAGTTTTCAATGG	2	True	NA	-8	True	AATAAA	-16	NA	95789782	95768952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_35595.nic	chr11	+	1046	8	NIC	ENSG00000166037.11	novel	2084	7	NA	NA	-16	-1259	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	199.057678032457	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTCAAAACCACCAGAAA	-20	True	NA	75	True	ATTAAA	-6	NA	95790481	95821956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_95790744_95795515_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_35597.known	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	42.5143766533419	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	77	False	NA	11	True	AGTAAA	-18	NA	95790658	95823215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_35599.known	chr11	+	870	6	FSM	ENSG00000166037.11	ENST00000541365.5	870	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	190.864978453356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTTAAAATGTGAGAA	20	True	NA	NA	False	NA	NA	NA	95790521	95818903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799236_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826
transcript_3560.known	chr1	-	1720	7	FSM	ENSG00000185519.9	ENST00000375662.5	1720	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	8.65383665716478	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTTGGCCTGGTCTCTG	-27	True	NA	-1	True	ATTAAA	-20	NA	16073651	16057768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16058718_16059493_16059605_16059868_16060052_16062098_16062193_16062498_16062535_16063520_16063637_16073420
transcript_35607.known	chr11	-	2880	11	FSM	ENSG00000149231.16	ENST00000645500.1	2880	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	63.8063476466096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-4	True	NA	NA	False	AATAAA	-16	NA	96389948	96352778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96388694_96388830_96389843
transcript_35609.known	chr11	-	2611	10	FSM	ENSG00000149231.16	ENST00000646050.1	2611	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	51.3977469842962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAATAAAGTAAAATGG	23	False	96389944	NA	False	NA	NA	NA	96389921	96352804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359098_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_35610.known	chr11	-	3156	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	44.3014365901448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	12	True	NA	NA	False	AATAAA	-16	NA	96389880	96352778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
transcript_35611.known	chr11	-	2715	10	FSM	ENSG00000149231.16	ENST00000646818.2	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	30.8760964717584	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAACCCTGTGTGTTC	-20	True	NA	NA	False	AATAAA	-22	NA	96389912	96352772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_35612.known	chr11	-	2563	10	FSM	ENSG00000149231.16	ENST00000647080.1	2563	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	56.0233637329161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGCAGAGTGAACAAATG	23	False	96389944	NA	False	AATAAA	-8	NA	96389921	96352786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359179_96365126_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_35619.known	chr11	+	3140	2	FSM	ENSG00000183340.7	ENST00000332349.5	3140	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAAAGGTTTAA	-14	True	NA	5	True	AATAAA	-20	NA	96390012	96393561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_96390074_96390482
transcript_35623.known	chr11	+	8156	24	FSM	ENSG00000165895.19	ENST00000298815.13	8156	24	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_18	15.6960737026378	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTTTGTACTTGAAG	-1	True	NA	24	True	AATAAA	-20	NA	100687287	100993941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_100687833_100770342_100770439_100795104_100795167_100859553_100859626_100913451_100913554_100921493_100921605_100933155_100933261_100936202_100936333_100941783_100941885_100943758_100943869_100948456_100948536_100949916_100949957_100959882_100959946_100960914_100960990_100961683_100961769_100962408_100962468_100965670_100965777_100973174_100973335_100974458_100974604_100976056_100976438_100976814_100976972_100978986_100979050_100987512_100987593_100988712
transcript_35626.known	chr11	-	1865	2	FSM	ENSG00000248027.1	ENST00000501397.1	1865	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGTCTTATTT	NA	False	NA	0	True	TATAAA	-21	NA	100687955	100684161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_100685704_100687632
transcript_35628.known	chr11	+	2193	7	FSM	ENSG00000137691.13	ENST00000434758.7	2193	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	11.6285090283416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAAATGTCTGTTTGC	-8	True	NA	NA	False	CATAAA	-14	NA	102047436	102084554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214_102081282_102083070
transcript_35633.known	chr11	+	520	4	FSM	ENSG00000137691.13	ENST00000534360.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.1712593442672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTACACAACATCATT	13	True	NA	NA	False	AATAAA	-19	NA	102047457	102076111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102075872
transcript_35635.known	chr11	+	845	6	FSM	ENSG00000137691.13	ENST00000526781.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	10.5185550338438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGGAGAACAATT	10	True	NA	NA	False	ATTAAA	-16	NA	102047454	102081435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214
transcript_35636.known	chr11	+	5398	9	FSM	ENSG00000137693.14	ENST00000615667.4	5398	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	41.8686562359004	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	13	False	NA	NA	False	AATATA	-19	NA	102110460	102233423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206087_102209516_102209565_102223621_102223753_102227468_102227582_102229701
transcript_35638.known	chr11	+	1490	8	FSM	ENSG00000137693.14	ENST00000531439.5	1490	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	31.5219392338293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGTGAAGGATCTAAG	116	False	NA	NA	False	AAGAAA	-44	NA	102110848	102229963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206075_102223621_102223753_102227468_102227582_102229701
transcript_35639.known	chr11	+	5350	8	FSM	ENSG00000137693.14	ENST00000537274.5	5350	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	41.9484620622468	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	13	False	NA	NA	False	AATATA	-19	NA	102110460	102233423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206087_102223621_102223753_102227468_102227582_102229701
transcript_3564.nnic	chr1	-	3926	17	NNC	ENSG00000142627.13	novel	3946	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.7884013956124	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	0	True	NA	0	True	AATAAA	-22	NA	16156070	16124336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16125321_16129433_16129569_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16150895_16150964_16155847
transcript_35641.known	chr11	+	2393	7	FSM	ENSG00000137693.14	ENST00000526343.5	2393	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	45.6252853872353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATACTCTAATATAGATT	13	False	NA	-2	True	TATAAA	-16	NA	102110460	102230592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102205892_102206075_102223621_102223753_102227468_102227582_102229701
transcript_35642.known	chr11	+	1365	7	FSM	ENSG00000137693.14	ENST00000629586.2	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	53.6366375613618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTCAGGCAGACTGAAT	116	False	NA	NA	False	GATAAA	-25	NA	102110848	102229940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102205892_102206087_102223621_102223753_102227468_102227582_102229701
transcript_35643.known	chr11	-	631	1	FSM	ENSG00000277459.1	ENST00000614441.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTTGTAATTGTTTC	1637	False	NA	-4	True	AATAAA	-23	NA	102110457	102109826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_102109800_102110500
transcript_35647.known	chr11	+	2617	10	FSM	ENSG00000110330.10	ENST00000532672.5	2617	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.088756048876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	-8	True	NA	23	True	AATAAA	-14	NA	102347246	102378669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102347377_102348597_102348765_102349877_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_35652.known	chr11	+	3764	9	FSM	ENSG00000110330.10	ENST00000227758.7	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	36.8162667852133	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	-41	True	NA	24	True	AATAAA	-15	NA	102347213	102378670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102347377_102348597_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_35654.nnic	chr11	+	1187	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	11982	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	143.597431112894	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	NA	False	NA	23	True	AATAAA	-14	NA	102374723	102378669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_102374934_102377495_102377751_102377856_102377899_102377989
transcript_35657.known	chr11	-	3304	5	FSM	ENSG00000152558.15	ENST00000398136.7	3304	5	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_4	27.4499544626216	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTGTGTGATTTTG	36	True	NA	-12	True	AATAAA	-19	NA	102452765	102396331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_102398892_102401538_102401693_102401915_102402207_102448811_102448869_102452523
transcript_3566.known	chr1	-	3946	17	FSM	ENSG00000142627.13	ENST00000358432.8	3946	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_15	14.115040736746	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	1	True	NA	0	True	AATAAA	-22	NA	16156069	16124336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16125321_16129433_16129590_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16150895_16150964_16155847
transcript_35663.known	chr11	-	1535	8	FSM	ENSG00000137692.12	ENST00000531571.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	353.301744191816	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	10	True	NA	-35	True	AATAAA	-10	NA	103092161	103062097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091515
transcript_35664.known	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	339.465486208143	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-6	True	NA	-30	True	NA	NA	NA	103092177	103062170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
transcript_35665.known	chr11	-	12675	8	FSM	ENSG00000137692.12	ENST00000260247.10	12675	8	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_5	52.9358487381911	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGTAATCTTTTGTGT	11	True	NA	NA	False	AATAAA	-42	NA	103092160	103050685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091786
transcript_35668.nic	chr11	-	1249	7	NIC	ENSG00000137692.12	novel	1535	8	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	370.984276396363	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	NA	False	NA	-35	True	AATAAA	-10	NA	103092238	103062097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091786
transcript_35675.known	chr11	-	3838	7	FSM	ENSG00000170962.13	ENST00000393158.7	3838	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2.6718699236469	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCATTATTTAGTACT	-4	True	NA	-10	True	AATAAA	-19	NA	104164147	103907188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103909820_103926911_103927127_103943451_103943651_103947661_103947725_103996064_103996246_104000050_104000256_104163803
transcript_35677.known	chr11	+	5506	17	FSM	ENSG00000152578.13	ENST00000282499.10	5506	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	20.3599445910346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGAATTGAATTGAATT	-20	True	NA	NA	False	AATAAA	-16	NA	105610072	105982090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105918711_105918919_105924398_105924770_105926740_105926940_105933721_105933970_105971913_105972029_105974309_105974445_105979574
transcript_35678.known	chr11	+	5059	16	FSM	ENSG00000152578.13	ENST00000530497.1	5059	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	19.9260856389028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTGAATTGAATTGAAT	106	False	NA	NA	False	AATAAA	-15	NA	105610997	105982089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105918711_105918919_105924398_105924770_105926740_105926940_105933721_105933970_105971913_105972029_105974309_105974445_105979574
transcript_35679.known	chr11	+	2994	11	FSM	ENSG00000152578.13	ENST00000393125.6	2994	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	18.088670487352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	10	False	NA	NA	False	AATAAA	-18	NA	105610028	105913110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_35680.known	chr11	+	2778	10	FSM	ENSG00000152578.13	ENST00000428631.6	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	18.4216726898335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	12	True	NA	NA	False	AATAAA	-18	NA	105610723	105913110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_35681.known	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	28	False	NA	NA	False	AATAAA	-35	NA	105610120	105614436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105610429_105610907_105611086_105612275
transcript_35691.known	chr11	-	4103	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	40.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-6	True	NA	2	True	AATAAA	-43	NA	106022240	106007898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106010111_106010455_106011068_106020961
transcript_35692.nic	chr11	-	3224	3	NIC	ENSG00000170903.12	novel	4103	3	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	38.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-1	True	NA	2	True	AATAAA	-43	NA	106022235	106007898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_106010111_106010455_106011068_106021835
transcript_35693.known	chr11	-	948	3	FSM	ENSG00000170903.12	ENST00000530788.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	29.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGATGAGCCTCATTTG	NA	False	NA	NA	False	NA	NA	NA	106022403	106009983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106010111_106010455_106011068_106022194
transcript_35696.known	chr11	+	2767	6	FSM	ENSG00000149313.11	ENST00000278618.9	2767	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_3	15.6665248220529	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGAGCCTGACACTG	-3	True	NA	21	True	AATAAA	-23	NA	106077661	106098695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_106077894_106079466_106079693_106090556_106090679_106091315_106091478_106094582_106094655_106096742
transcript_3570.nnic	chr1	-	4163	17	NNC	ENSG00000142627.13	novel	3946	17	NA	NA	-76	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	22.9223383133135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGGCTTTCAGTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	16156145	16124338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16125464_16129433_16129590_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16150895_16150964_16155847
transcript_35700.known	chr11	+	1252	5	FSM	ENSG00000149313.11	ENST00000525660.1	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	222.081066279861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAACATGGAAACG	-7	True	NA	NA	False	AATGAA	-22	NA	106077657	106097298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_106077894_106079466_106079693_106091315_106091478_106094582_106094655_106096742
transcript_35701.known	chr11	-	3840	4	FSM	ENSG00000182359.15	ENST00000531837.2	3840	4	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_3	30.6195289897731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	-13	True	NA	NA	False	AATAAA	-19	NA	106077347	106051097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106054456_106058864_106059110_106076506_106076708_106077311
transcript_35702.known	chr11	-	3751	3	FSM	ENSG00000182359.15	ENST00000526793.5	3751	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	36.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	106077459	106051097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106054456_106058864_106059110_106077311
transcript_35703.known	chr11	-	3278	18	FSM	ENSG00000152404.16	ENST00000282251.10	3244	18	-19	-15	-19	15	multi-exon	FALSE	canonical	3	91	junction_8	13.6247281805209	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATTTCTGGATT	NA	False	NA	3	True	ATTAAA	-36	NA	107457844	107326344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
transcript_35708.known	chr11	-	4067	12	FSM	ENSG00000137760.15	ENST00000428149.7	4067	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	5.38286230657726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTCTGCTCATT	-4	True	NA	-1	True	AATAAA	-19	NA	107565735	107502726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565600
transcript_3571.nic	chr1	-	3882	16	NIC	ENSG00000142627.13	novel	3946	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_15	23.5283280796197	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	-3	True	NA	0	True	AATAAA	-22	NA	16156073	16124336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16125321_16129433_16129590_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16155847
transcript_35710.known	chr11	-	2114	12	FSM	ENSG00000137760.15	ENST00000417449.6	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	9.21281895284235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTACCTGAACACATCA	-11	True	NA	NA	False	NA	NA	NA	107565742	107504657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565629
transcript_35715.known	chr11	-	2769	8	FSM	ENSG00000110660.15	ENST00000525815.6	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	11.780301787479	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGGTTTCTTTG	8	True	NA	NA	False	ATTAAA	-25	NA	107858787	107790990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_35716.known	chr11	-	1007	7	FSM	ENSG00000110660.15	ENST00000533664.1	1007	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	49.6680648572769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCCCCCACCAGGATAA	-13	True	NA	NA	False	NA	NA	NA	107858808	107792597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107858657
transcript_35720.known	chr11	+	1885	2	FSM	ENSG00000179331.3	ENST00000320578.3	1885	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGTCAAAATTATTAAT	16	True	NA	NA	False	AGTAAA	-17	NA	107928447	107963482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_107928796_107961945
transcript_35726.known	chr11	+	6171	19	FSM	ENSG00000166266.14	ENST00000393094.7	6171	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	12.8582010146573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTACCTATCCAGAAAA	-31	True	NA	13	True	AATAAA	-15	NA	108008897	108107761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189
transcript_35731.nic	chr11	+	2522	18	ISM	ENSG00000166266.14	ENST00000531427.5	3596	20	-341	8379	-1	-8379	5prime_fragment	FALSE	canonical	3	99	junction_2	12.9430479930147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATGAGAGAAGAAGAGAAT	-10	True	NA	20	True	NA	NA	NA	108008918	108098473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405
transcript_35732.known	chr11	+	1498	13	FSM	ENSG00000075239.14	ENST00000673531.1	1498	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	131.529754766322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAGATAAGCTGTTTC	1	True	NA	8	True	NA	NA	NA	108121566	108147470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108121679_108127885_108127980_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_35734.known	chr11	+	1537	12	FSM	ENSG00000075239.14	ENST00000265838.9	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_7	17.9618512178883	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	1	True	NA	40	True	AATAAA	-37	NA	108121566	108147603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_35736.known	chr11	+	1222	9	FSM	ENSG00000075239.14	ENST00000672907.1	1222	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.983029045027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	1	True	NA	40	True	AATAAA	-37	NA	108121566	108147603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108121679_108131906_108131955_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_35738.nic	chr11	+	1220	6	ISM	ENSG00000166266.14	ENST00000531427.5	3596	20	-432	52060	-70	0	5prime_fragment	FALSE	canonical	3	99	junction_2	18.0665436650179	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTAGAACTTAGTATA	NA	False	NA	NA	False	NA	NA	NA	108008827	108054792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646
transcript_35742.known	chr11	-	605	1	FSM	ENSG00000288012.1	ENST00000660738.1	605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGATGACTCTTAATATT	NA	False	NA	2	True	AGTAAA	-19	NA	108009282	108008677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_108008700_108009300
transcript_35743.nic	chr11	-	4333	17	ISM	ENSG00000149308.17	ENST00000278612.9	6113	18	-30	3670	-30	299	5prime_fragment	TRUE	canonical	3	48	junction_10	13.75553865721	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCAAGTTTGAAAGTT	1302	False	NA	NA	False	AGTAAA	-41	NA	108222668	108160884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_108162015_108162119_108162181_108169743_108169853_108169927_108170044_108172198_108173852_108176245_108176375_108176993_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_35745.nic	chr11	-	1136	11	ISM	ENSG00000149308.17	ENST00000278612.9	6113	18	-30	19778	-30	-5861	5prime_fragment	FALSE	canonical	3	48	junction_4	15.0096635538576	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGACTATTTATTTCA	1302	False	NA	NA	False	NA	NA	NA	108222668	108176992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_35748.known	chr11	+	442	4	FSM	ENSG00000149311.20	ENST00000683914.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	8.73053390247253	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGTGAGTTTTTTTT	31	False	NA	7	True	AATAAA	-16	NA	108223148	108229366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177
transcript_35750.known	chr11	-	4253	8	FSM	ENSG00000178202.13	ENST00000323468.10	4253	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	9.08238932871562	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAAAGATACCTTTTG	18	True	NA	-12	True	AATAAA	-21	NA	108498384	108472115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_108474953_108477606_108477712_108479300_108479496_108481179_108481377_108482005_108482223_108486156_108486441_108490969_108491168_108498164
transcript_35755.known	chr11	+	3217	18	FSM	ENSG00000178105.12	ENST00000322536.8	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_10	18.9887965512211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATGTTTGCATTGTG	-11	True	NA	-79	True	AATAAA	-21	NA	108665068	108940927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872_108918019_108940245
transcript_35758.nic	chr11	+	2129	14	ISM	ENSG00000178105.12	ENST00000526794.1	6707	17	-69	83735	-5	-2968	5prime_fragment	FALSE	canonical	3	186	junction_10	20.585799666979	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATGAAGAGAAATTTTAA	-27	True	NA	NA	False	AAGAAA	-31	NA	108665052	108838508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445
transcript_35759.nic	chr11	+	1875	13	ISM	ENSG00000178105.12	ENST00000688536.1	3144	15	-16	26879	-5	-26879	5prime_fragment	FALSE	canonical	3	186	junction_10	20.7799315580094	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAGAAACTGGCAAAA	-27	True	NA	39	True	AAGAAA	-1	NA	108665052	108723271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996
transcript_35762.known	chr11	-	4392	14	FSM	ENSG00000137710.17	ENST00000645495.2	4392	14	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	27.4103163751713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCACTGTTGTTATTTAA	1	True	NA	-20	True	AATAAA	-24	NA	110296614	110229440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_110232034_110233236_110233480_110236098_110236192_110237491_110237653_110247702_110247834_110253945_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_35765.nic	chr11	-	1289	10	ISM	ENSG00000137710.17	ENST00000645495.2	4392	14	-89	18364	9	6140	5prime_fragment	FALSE	canonical	3	283	junction_3	26.2231638249021	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAATAGCAGAAAAGGAA	0	True	NA	-16	True	AAGAAA	-2	NA	110296703	110247804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110247834_110253945_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_35766.nic	chr11	-	1261	9	ISM	ENSG00000137710.17	ENST00000645495.2	4392	14	-89	24504	9	0	5prime_fragment	FALSE	canonical	3	283	junction_2	25.617376914899	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGGTTTATGACCTTTC	0	True	NA	NA	False	NA	NA	NA	110296703	110253944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_35768.known	chr11	-	4117	12	FSM	ENSG00000137710.17	ENST00000544551.5	4117	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	91.6517844167633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCCACTGTTGTTATTT	273	False	NA	-22	True	AATAAA	-22	NA	110296712	110229442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_110232034_110233236_110233480_110236098_110236192_110237491_110237653_110247702_110247834_110253945_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110272535_110272620_110279680_110279757_110296466
transcript_35769.nic	chr11	-	877	7	ISM	ENSG00000137710.17	ENST00000645495.2	4392	14	-29	28388	-3	285	5prime_fragment	FALSE	canonical	3	317	junction_6	16.1184849026066	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGAATTGTGGCTAGG	-3	True	NA	NA	False	AATAAA	-11	NA	110296643	110257828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_35771.nic	chr11	-	242	2	ISM	ENSG00000137710.17	ENST00000533678.1	531	5	-25	14913	-3	-14913	5prime_fragment	FALSE	canonical	3	317	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCGAAACCAGTAAGTGTA	-3	True	NA	NA	False	AAAAAG	-11	NA	110296643	110279691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110279757_110296466
transcript_35772.known	chr11	+	3144	4	FSM	ENSG00000137714.3	ENST00000260270.3	3144	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	31.6333157709821	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTGTATAAAGGTGAT	14	True	NA	NA	False	ATTAAA	-20	NA	110429947	110464884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_110430306_110435833_110435959_110456917_110457048_110462353
transcript_35780.known	chr11	+	1332	5	FSM	ENSG00000214290.9	ENST00000526216.1	1332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.2736184954957	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	423	False	NA	11	True	AATAAA	-18	NA	111299732	111308735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111300018_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_35782.known	chr11	-	5442	2	FSM	ENSG00000196167.10	ENST00000355430.4	5442	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACTAAATTAACTT	-4	True	NA	NA	False	AATAAA	-19	NA	111299814	111293445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111298667_111299593
transcript_35783.known	chr11	+	1763	8	FSM	ENSG00000204381.12	ENST00000525126.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.2109662560163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAAATCAAATAAAGAG	-16	True	NA	-7	True	NA	NA	NA	111540708	111560933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111540929_111541561_111541586_111543922_111544221_111549617_111549776_111554560_111554594_111555206_111555291_111557540_111557648_111560094
transcript_35784.known	chr11	+	1703	7	FSM	ENSG00000204381.12	ENST00000533265.5	1703	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	14.8856754409511	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTTTTCAAAGAATAATA	5	True	NA	-22	True	NA	NA	NA	111540729	111560918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111540929_111543922_111544221_111549617_111549776_111554560_111554594_111555206_111555291_111557540_111557648_111560094
transcript_35785.known	chr11	+	9622	15	FSM	ENSG00000170145.5	ENST00000304987.4	9622	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_6	7.38897413552857	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGGTGATGTGAATGTC	5	True	NA	16	True	AATAAA	-20	NA	111602448	111730855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111602699_111616242_111616360_111620338_111620403_111688000_111688163_111700885_111701011_111701451_111701576_111703202_111703424_111704986_111705140_111712210_111712376_111719774_111720004_111720477_111720763_111720898_111721063_111721829_111721941_111722664_111722757_111723495
transcript_35789.known	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	228.494259592373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-5	True	NA	-5	True	AATAAA	-23	NA	111766382	111726907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_35790.nnic	chr11	-	1962	15	NIC	ENSG00000137713.16	novel	2082	16	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	180.347849831307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGCCGAACGAAATTT	-12	True	NA	-10	True	AATAAA	-18	NA	111766389	111726912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_111727058_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_35792.known	chr11	-	5553	15	FSM	ENSG00000137713.16	ENST00000527614.6	5553	15	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_9	65.7296953982206	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCAGGTCTTTCCTGTG	-12	True	NA	NA	False	NA	NA	NA	111766389	111737876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_35803.known	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	176.604127220966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	9	True	NA	33	True	NA	NA	NA	111766368	111741320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_35813.known	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_5	13.5217134525872	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	15	True	NA	16	True	AATAAA	-45	NA	111871533	111786255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_35814.known	chr11	-	6158	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_5	19.2937813815747	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCTTAATGTGA	-1	True	NA	-19	True	AATAAA	-15	NA	111871581	111782194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_35819.known	chr11	-	2774	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	4.30116263352131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGTCTGTTTGACTC	4	True	NA	NA	False	AATAAA	-20	NA	111879165	111874055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
transcript_35824.known	chr11	+	534	4	FSM	ENSG00000137720.8	ENST00000528125.5	534	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	58.8179866669674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGATCTTAATATTG	-13	True	NA	NA	False	NA	NA	NA	111878934	111883900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111879041_111882367_111882599_111883135_111883203_111883770
transcript_35825.known	chr11	+	2568	4	FSM	ENSG00000137720.8	ENST00000260276.8	2568	4	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_3	6.54896090146283	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCTGGGCTACTA	22	True	NA	NA	False	AATAAA	-14	NA	111879540	111885975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111879606_111882367_111882599_111883135_111883203_111883770
transcript_35826.known	chr11	-	2206	4	FSM	ENSG00000255561.7	ENST00000531487.1	2206	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTTGCTCTGCCG	NA	False	NA	NA	False	NA	NA	NA	111879457	111874758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878960
transcript_35828.known	chr11	+	599	3	FSM	ENSG00000137720.8	ENST00000530214.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	54	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTATCCCTTTTTTT	23	True	NA	11	True	AATAAA	-22	NA	111879541	111884074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111879606_111882367_111882599_111883770
transcript_35829.known	chr11	-	2345	15	FSM	ENSG00000086848.15	ENST00000398006.6	2345	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	23.1257652934592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	2	True	NA	-12	True	AATAAA	-17	NA	111871301	111786283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_35830.known	chr11	+	1104	4	FSM	ENSG00000149300.10	ENST00000278601.6	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCGCGTTTTCTGGG	-12	True	NA	15	True	AATAAA	-15	NA	111918912	111926871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111919005_111924325_111924364_111925652_111925715_111925959
transcript_35831.known	chr11	+	882	4	FSM	ENSG00000149300.10	ENST00000527286.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.4986771653491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATTGTTGCTCCTGCTC	34	False	NA	NA	False	NA	NA	NA	111918996	111926478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111919260_111924325_111924364_111925652_111925715_111925959
transcript_35832.known	chr11	-	774	3	FSM	ENSG00000109846.9	ENST00000650687.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTATGATTGCATTAT	-2	True	NA	60	True	AATAAA	-18	NA	111911770	111908563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111908968_111910326_111910450_111911523
transcript_35833.known	chr11	+	843	2	FSM	ENSG00000170276.6	ENST00000304298.4	843	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTACTGCTCCCTA	-5	True	NA	10	True	AATAAA	-16	NA	111912733	111914093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111912924_111913440
transcript_35834.known	chr11	-	887	4	FSM	ENSG00000109846.9	ENST00000527950.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTGTTTGAAT	16	False	NA	1	True	AATAAA	-19	NA	111923722	111908622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111923702
transcript_35837.known	chr11	+	5826	20	FSM	ENSG00000150764.14	ENST00000440460.7	5826	20	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	8.47646244092814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTTCCTCAAGTGATC	-19	True	NA	14	True	AATAAA	-21	NA	111937342	112022653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
transcript_35840.known	chr11	+	4825	16	FSM	ENSG00000150764.14	ENST00000615255.1	4825	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	11.7681302205953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	-23	True	NA	NA	False	NA	NA	NA	111977308	112021979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111977795_111980736_111980850_111982338_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
transcript_35843.nic	chr11	+	1251	7	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-211	40201	-211	6457	5prime_fragment	FALSE	canonical	3	29	junction_5	6.8414585839246	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGGAAGCAAAGAAAATG	1404	False	NA	NA	False	AAAAAG	-4	NA	111937131	111982452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338
transcript_35844.known	chr11	+	1945	6	FSM	ENSG00000150764.14	ENST00000529225.5	1945	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	20.0459472213213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	2910	False	NA	NA	False	ATTAAA	-15	NA	111927143	111975995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111927388_111929817_111929911_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_35846.nic	chr11	+	2036	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-211	46658	-211	0	5prime_fragment	FALSE	canonical	3	38	junction_2	4.43705983732471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	1404	False	NA	NA	False	ATTAAA	-15	NA	111937131	111975995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_35847.nic	chr11	+	839	3	ISM	ENSG00000150764.14	ENST00000615255.1	4825	16	-126	39527	-126	6457	5prime_fragment	FALSE	canonical	3	13	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGGAAGCAAAGAAAATG	-26	True	NA	NA	False	AAAAAG	-4	NA	111977182	111982452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_111977795_111980736_111980850_111982338
transcript_35848.known	chr11	+	3878	14	FSM	ENSG00000150768.17	ENST00000280346.11	3878	14	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_10	39.7495115522072	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTCTGTTGGTAATT	-17	True	NA	25	True	ATTAAA	-29	NA	112025407	112064404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_35853.known	chr11	+	3723	13	FSM	ENSG00000150768.17	ENST00000681339.1	3723	13	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_9	168.31815113053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	1	True	NA	-4	True	AAAAAG	-44	NA	112025425	112064375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_35861.known	chr11	+	2322	6	FSM	ENSG00000150776.18	ENST00000420986.6	2322	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	37.7655928061509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGGTCTTGGTTCTG	NA	False	NA	9	True	AGTAAA	-16	NA	112074085	112084134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_35865.known	chr11	+	3686	6	FSM	ENSG00000150776.18	ENST00000393047.8	3686	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5.74108003776293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	-20	True	NA	9	True	AATAAA	-19	NA	112074298	112085150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_35868.known	chr11	+	3739	6	FSM	ENSG00000150776.18	ENST00000532163.5	3739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.2117990804612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	NA	False	NA	9	True	AATAAA	-19	NA	112074286	112085150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074917_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_35869.known	chr11	+	2246	4	FSM	ENSG00000150776.18	ENST00000530104.2	2246	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	35.9103822808329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAAAGCTTCTATTTT	-9	True	NA	NA	False	ATTAAA	-18	NA	112074309	112082427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408
transcript_35872.known	chr11	-	741	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	185	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	75	False	NA	-32	True	AGTAAA	-13	NA	112086722	112085148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_112085463_112085966_112086311_112086639
transcript_35874.known	chr11	-	805	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	2090	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	-1	False	NA	NA	False	AAGAAA	-14	NA	112086798	112084816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_112085463_112086639
transcript_35875.known	chr11	-	1103	6	FSM	ENSG00000150773.12	ENST00000532211.5	1103	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	3.54400902933387	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	264	False	NA	NA	False	ATTAAA	-21	NA	112073980	112067797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073929
transcript_35876.known	chr11	+	1339	4	FSM	ENSG00000204370.13	ENST00000375549.8	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	838.192234646816	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGCTATCAGTAGTT	1	True	NA	27	True	AATAAA	-35	NA	112086872	112095794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112094804
transcript_35878.known	chr11	+	1074	4	FSM	ENSG00000204370.13	ENST00000528021.6	1074	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	838.192234646816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATAATGGCTTGGTT	1	True	NA	NA	False	AATAAA	-17	NA	112086872	112120016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112119291
transcript_35882.known	chr11	+	872	6	FSM	ENSG00000150787.8	ENST00000280362.8	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	30.2191991952136	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGGAGACAATATATATA	35	True	NA	7	True	AATAAA	-18	NA	112226427	112233973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112226527_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
transcript_35885.known	chr11	+	846	5	FSM	ENSG00000150787.8	ENST00000528679.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	190.793573004963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGCTTATGTGACTT	-26	True	NA	-57	True	AATATA	-6	NA	112226366	112233909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112226527_112228593_112228674_112230625_112230683_112233162_112233234_112233431
transcript_35887.known	chr11	+	2826	19	FSM	ENSG00000149294.17	ENST00000531044.5	2826	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.86769395550341	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACATGCACACACACAC	15	False	NA	NA	False	NA	NA	NA	112961435	113275489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112961665_113202378_113202454_113204285_113204505_113205522_113205667_113206042_113206181_113207260_113207379_113207832_113208003_113214368_113214512_113231644_113231796_113232169_113232355_113232717_113232815_113233146_113233318_113235032_113235165_113246367_113246371_113255876_113256002_113260145_113260324_113270187_113270396_113271759_113271877_113275266
transcript_35889.known	chr11	-	517	3	FSM	ENSG00000255129.7	ENST00000533504.2	556	3	38	1	38	-1	multi-exon	FALSE	canonical	2	2	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTCTGTGTTATTAT	9	True	NA	NA	False	AATAAA	-14	NA	113314437	113279382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113279650_113280490_113280633_113314329
transcript_35890.nic	chr11	+	2362	23	NIC	ENSG00000149292.17	novel	2256	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	8.99644098592455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	-7	True	NA	18	True	AATAAA	-18	NA	113314579	113366387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_113314619_113315950_113316054_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_35891.known	chr11	+	2256	22	FSM	ENSG00000149292.17	ENST00000529221.6	2256	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.9354043622411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	-4	True	NA	18	True	AATAAA	-18	NA	113314582	113366387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_35895.known	chr11	-	2735	16	FSM	ENSG00000086827.9	ENST00000535142.5	2735	16	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	76.1278456866401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGGAATGGGCCACCAT	22	True	NA	-93	True	NA	NA	NA	113773691	113733274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113733815_113736619_113736774_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_35896.known	chr11	-	2873	16	FSM	ENSG00000086827.9	ENST00000200135.8	2873	16	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_9	28.9367125522809	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	21	True	NA	-5	True	AATAAA	-16	NA	113773692	113733186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_35900.nnic	chr11	-	2692	15	NIC	ENSG00000086827.9	novel	2873	16	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	78.5610382740317	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	10	True	NA	-5	True	AATAAA	-16	NA	113773703	113733186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_35908.known	chr11	-	4669	25	FSM	ENSG00000048028.11	ENST00000003302.8	4669	25	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	118.559342560312	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	-4	True	NA	-11	True	AATAAA	-15	NA	113875570	113797873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113806488_113806585_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_35919.nic	chr11	-	4725	25	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_23	115.977099032525	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	113875577	113798091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113874516_113874880_113875444
transcript_35921.nic	chr11	-	4596	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	351	junction_23	40.7909512186619	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	NA	False	NA	-11	True	AATAAA	-15	NA	113875593	113797873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_35922.nic	chr11	-	4378	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	351	junction_23	40.7909512186619	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113875593	113798091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_35937.known	chr11	-	3431	22	FSM	ENSG00000048028.11	ENST00000545540.5	3431	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_21	89.406686302287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAGATTAGAAATATAAA	-4	True	NA	NA	False	AATACA	-26	NA	113875570	113798804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
transcript_3594.nnic	chr1	-	2789	16	NNC	ENSG00000142632.17	novel	3322	16	NA	NA	7	-250	intron_retention	FALSE	canonical	3	11	junction_15	62.586970600029	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-6	True	NA	-7	True	AATAAA	-17	NA	16212645	16198103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16208808_16212501
transcript_35949.nic	chr11	-	2172	7	ISM	ENSG00000048028.11	ENST00000542033.5	852	8	-60	1216	-23	-1216	5prime_fragment	FALSE	canonical	3	351	junction_6	39.3813266522205	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTTATAGTAGTATAAT	NA	False	NA	NA	False	AAAAAG	-17	NA	113875593	113832098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_35955.known	chr11	+	2205	9	FSM	ENSG00000166736.12	ENST00000504030.7	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	6.68837611083587	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	0	True	NA	5	True	AATAAA	-19	NA	113975107	113990313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113986729_113986824_113987047_113989464
transcript_35956.known	chr11	+	2221	8	FSM	ENSG00000166736.12	ENST00000506841.6	2221	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	7.07106781186548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	80	False	NA	5	True	AATAAA	-19	NA	113975187	113990313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113987047_113989464
transcript_35957.known	chr11	+	1385	8	FSM	ENSG00000166736.12	ENST00000510849.5	1385	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	10.8684152009201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGACCCAGGGAATG	178	False	NA	NA	False	NA	NA	NA	113975285	113989832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986517_113986729_113986824_113987047_113989464
transcript_35959.known	chr11	+	8494	7	FSM	ENSG00000109906.15	ENST00000335953.9	8494	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.37436854187255	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGGTACGATTCCCT	-16	True	NA	NA	False	AATAAA	-15	NA	114059710	114256765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114059883_114063210_114064569_114156336_114156435_114186951_114187039_114242166_114242338_114247197_114247366_114250325
transcript_35960.known	chr11	+	1080	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	0	0	0	0	multi-exon	TRUE	canonical	3	662	junction_4	79.7718970286877	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	-12	True	NA	32	True	AATAAA	-39	NA	114439466	114450279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_3597.known	chr1	-	3322	16	FSM	ENSG00000142632.17	ENST00000270747.8	3322	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_15	45.0642011159881	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCCTGTGGCTTCTA	-13	True	NA	1	True	ATTAAA	-21	NA	16212652	16197853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16209084_16212501
transcript_35970.known	chr11	+	664	6	FSM	ENSG00000076043.11	ENST00000539119.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	317.153338308144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGTTAACTTGCATCTC	49	False	NA	NA	False	NA	NA	NA	114439581	114450062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_35972.known	chr11	+	1908	5	FSM	ENSG00000076053.12	ENST00000542140.5	1908	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	261.32678297488	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGTGTGTTATTTT	3	True	NA	6	True	TATAAA	-2	NA	114400665	114408909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114400768_114401697_114401861_114402831_114402916_114405705_114405800_114407444
transcript_35973.known	chr11	+	4243	5	FSM	ENSG00000076053.12	ENST00000540163.5	4243	5	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_3	144.987930532165	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGTACAAAATTCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	114400029	114410607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405708_114405800_114407444
transcript_35974.known	chr11	+	475	5	FSM	ENSG00000076043.11	ENST00000541703.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	330.980645204519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACCAAAGAAGGCTGCTT	20	True	NA	NA	False	NA	NA	NA	114439498	114447852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114445978_114446088_114447825
transcript_35975.known	chr11	+	449	5	FSM	ENSG00000076043.11	ENST00000538198.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	340.78915769138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATGAAAAGAAGAGGAAAA	13	True	NA	NA	False	AAGAAA	-6	NA	114439545	114449917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114445978_114446088_114447825_114447880_114449845
transcript_35979.known	chr11	+	539	4	FSM	ENSG00000076043.11	ENST00000543131.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	392.65789463886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTTCGGTTAACTTG	32	True	NA	NA	False	NA	NA	NA	114439510	114450056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114445978_114446088_114447825_114447880_114449845
transcript_35981.known	chr11	+	710	3	FSM	ENSG00000076043.11	ENST00000539275.5	710	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	341.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	5	True	NA	32	True	AATAAA	-39	NA	114439483	114450279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114449845
transcript_35982.known	chr11	-	1980	1	FSM	ENSG00000180425.11	ENST00000623205.2	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTCCTAAGGAACT	41	False	114400529	NA	False	AATAAA	-19	NA	114400511	114398531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_114398500_114400500
transcript_35984.known	chr11	-	1246	10	FSM	ENSG00000182985.18	ENST00000616271.4	1246	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	65.8816747034287	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTCAATGAGGTGT	NA	False	NA	-83	True	AAGAAA	-28	NA	115240421	115176466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_115176593_115178643_115178776_115198405_115198439_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273
transcript_35985.known	chr11	+	2250	1	FSM	ENSG00000279771.1	ENST00000623333.1	2250	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGATGCTGAGTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	115659167	115661417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_115659200_115661400
transcript_35986.known	chr11	-	3322	3	FSM	ENSG00000246100.5	ENST00000499809.1	3322	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATATTTAATGTTCAAC	-1	True	NA	NA	False	AATAAA	-16	NA	115760194	115754247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_115757293_115758140_115758253_115760029
transcript_35988.known	chr11	-	2192	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	18.0315224667563	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	0	True	NA	-10	True	AATAAA	-22	NA	116772987	116748172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_35993.known	chr11	-	6539	14	FSM	ENSG00000109917.11	ENST00000227322.8	6539	14	0	0	0	0	multi-exon	TRUE	canonical	3	537	junction_3	37.5531181979677	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGTTAGAATTCATT	-10	True	NA	3	True	AATAAA	-22	NA	116788023	116773798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116779060_116779771_116779838_116782157_116782245_116782918_116783030_116783529_116783620_116784377_116784449_116784854_116784922_116785098_116785147_116785513_116785637_116785795_116785883_116786510_116786582_116786968_116787060_116787481_116787644_116787819
transcript_35994.known	chr11	-	1471	3	FSM	ENSG00000110244.7	ENST00000357780.5	1471	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGCCGGATGAATCCT	-1	True	NA	NA	False	AATAAA	-23	NA	116823304	116820699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116821882_116822658_116822786_116823142
transcript_35995.known	chr11	-	940	4	FSM	ENSG00000118137.10	ENST00000375320.5	940	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	224.287018497876	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	71	False	NA	-1	True	AATAAA	-18	NA	116837586	116835750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837527
transcript_35996.known	chr11	-	932	4	FSM	ENSG00000118137.10	ENST00000359492.6	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	221.460304945755	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	48	False	NA	-1	True	AATAAA	-18	NA	116837609	116835750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837558
transcript_35997.known	chr11	-	899	4	FSM	ENSG00000118137.10	ENST00000236850.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	96.2439031258027	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	0	True	NA	-1	True	AATAAA	-18	NA	116837622	116835750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837604
transcript_36.known	ERCC-00099	+	1344	1	FSM	ERCC-00099A	DQ875387	1344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00099_+_0_1300
transcript_3600.nnic	chr1	-	2647	15	NIC	ENSG00000142632.17	novel	3322	16	NA	NA	-16	-250	intron_retention	FALSE	canonical	3	11	junction_14	62.6260769185176	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-29	True	NA	-7	True	AATAAA	-17	NA	16212668	16198103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16212501
transcript_36001.known	chr11	-	927	2	FSM	ENSG00000118137.10	ENST00000375329.6	927	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	47	False	NA	-1	True	AATAAA	-18	NA	116837610	116835750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116836412_116837344
transcript_36002.known	chr11	-	1088	3	FSM	ENSG00000118137.10	ENST00000375323.5	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	9.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	8	True	NA	-1	True	AATAAA	-18	NA	116837614	116835750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116836412_116837000_116837158_116837344
transcript_36003.known	chr11	+	4175	6	FSM	ENSG00000168092.14	ENST00000527958.6	4175	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	15.2262930485394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGTGTCTTTCTGTC	-3	True	NA	28	True	TATAAA	-19	NA	117144286	117171045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117167420
transcript_36006.known	chr11	+	1056	6	FSM	ENSG00000168092.14	ENST00000529887.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	88.8783438189529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTCATTGGAACAAGG	8	True	NA	NA	False	AGTAAA	-27	NA	117144297	117176422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117175905
transcript_36009.known	chr11	+	4396	26	FSM	ENSG00000149577.16	ENST00000324225.9	4396	26	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_10	7.44515950131359	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGGGCCCTTGTTTG	3	True	NA	25	True	AATAAA	-13	NA	117178742	117197442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117179447_117181415_117181538_117181806_117181972_117182059_117182106_117182518_117182621_117182722_117182807_117183778_117183879_117184073_117184140_117186129_117186224_117186583_117186637_117187377_117187450_117187627_117187700_117188707_117188827_117189168_117189243_117189334_117189402_117189951_117190026_117190165_117190290_117190622_117190741_117191877_117192015_117192253_117192363_117192573_117192651_117192819_117192867_117193152_117193259_117193852_117193964_117195801_117195916_117196003
transcript_36011.known	chr11	-	3367	16	FSM	ENSG00000160613.15	ENST00000676339.1	3367	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	45.3929020393669	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCGCAATCTCTCCTT	-16	True	NA	-6	True	AATAAA	-19	NA	117232094	117205067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117206357_117206680_117206799_117207066_117207161_117207969_117208065_117208896_117209054_117218465_117218569_117219056_117219165_117219590_117219759_117223207_117223309_117224077_117224217_117224700_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376_117229857_117232026
transcript_36013.known	chr11	+	1048	6	FSM	ENSG00000149591.17	ENST00000525531.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	614.659450427633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTTACCCGAAAGCATC	9	False	NA	NA	False	NA	NA	NA	117199381	117204541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117199433_117199632_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_36014.known	chr11	+	3786	5	FSM	ENSG00000149591.17	ENST00000392951.9	3786	5	0	0	0	0	multi-exon	FALSE	canonical	3	1162	junction_1	53.8348168010257	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	-3	True	NA	NA	False	ATTAAA	-18	NA	117199369	117207464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117199433_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_36015.known	chr11	+	1477	5	FSM	ENSG00000149591.17	ENST00000278968.10	1477	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	537.758019466005	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTCAGGCCTGGCTG	21	False	NA	8	True	NA	NA	NA	117199393	117204782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_36017.known	chr11	+	2166	4	FSM	ENSG00000149591.17	ENST00000532870.5	2166	4	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_3	23.6220236220354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTTTTCTCAGGCCTG	216	False	NA	4	True	NA	NA	NA	117201872	117204778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117203194_117203306_117203485_117203781_117203885_117204214
transcript_36025.known	chr11	+	3477	15	FSM	ENSG00000167257.11	ENST00000300650.9	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	12.0384163986695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAACTTTTTAAAAAAA	10	True	NA	NA	False	ATTAAA	-15	NA	117232670	117286454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_36028.known	chr11	+	2695	15	FSM	ENSG00000167257.11	ENST00000531452.5	2695	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	21.2954196474074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTAGTTTGACTTCTT	5	False	NA	24	True	GATAAA	-31	NA	117232735	117285688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117232776_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_36030.known	chr11	-	1465	9	FSM	ENSG00000186318.18	ENST00000513780.5	1465	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	9.86154146165801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACCACACCTCCGTGGT	487	False	NA	NA	False	NA	NA	NA	117315798	117289534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117289808_117290487_117290660_117290899_117291050_117291711_117291814_117293053_117293189_117293870_117293934_117295130_117295348_117296872_117296962_117315534
transcript_36031.known	chr11	-	5835	9	FSM	ENSG00000186318.18	ENST00000313005.11	5835	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.30116263352131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGGGTTACTTTTTTT	-9	True	NA	-2	True	AGTAAA	-21	NA	117316256	117285697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117289808_117290487_117290660_117290899_117291050_117291711_117291814_117293053_117293189_117293870_117294009_117295130_117295348_117296872_117296962_117315534
transcript_36036.nic	chr11	+	962	6	ISM	ENSG00000167257.11	ENST00000300650.9	3477	15	-49	39614	-3	0	5prime_fragment	FALSE	canonical	3	46	junction_1	15.7149610244506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCGGGAAGAAACAAAGA	-39	True	NA	-18	True	ATTAAA	-22	NA	117232621	117246840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808
transcript_36040.known	chr11	+	585	5	FSM	ENSG00000110274.16	ENST00000527609.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	11.6270159542335	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGAGACCCCCCCAAA	224	False	NA	NA	False	AAAAAG	-17	NA	117328084	117351959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789
transcript_36041.known	chr11	+	5629	33	FSM	ENSG00000110274.16	ENST00000278935.8	5629	33	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.3278779286222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGGGTTGCCCTTGCT	-7	True	NA	30	True	AATAAA	-31	NA	117327853	117413266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117327905_117335604_117335681_117338565_117338669_117344165_117344278_117351789_117351989_117361834_117361994_117362403_117362539_117363428_117363507_117371079_117371467_117373750_117373832_117375707_117375792_117380613_117380706_117381700_117381869_117382795_117382943_117387202_117387413_117390776_117390909_117390998_117391216_117392225_117392304_117392495_117392628_117393003_117393127_117394349_117394494_117394919_117395004_117395122_117395192_117395546_117395723_117396053_117396181_117396549_117396612_117397090_117397314_117407924_117408033_117408889_117409029_117409617_117409966_117410827_117410895_117411794_117411918_117412071
transcript_36045.known	chr11	+	492	4	FSM	ENSG00000110274.16	ENST00000533570.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.7194104181711	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAGACCCCCCCAAAA	242	False	NA	NA	False	AAAAAG	-18	NA	117328102	117351960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117328209_117338565_117338669_117344165_117344278_117351789
transcript_36050.known	chr11	-	634	11	FSM	ENSG00000255245.4	ENST00000614497.5	634	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	213.065717561507	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGCATCGCCAACTC	12	True	NA	-85	True	NA	NA	NA	117876628	117820221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_36053.known	chr11	-	579	9	FSM	ENSG00000137726.17	ENST00000530956.6	579	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	191.328537795594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACAGCCCTTTCCCCA	-1	True	NA	NA	False	AAGAAA	-12	NA	117876689	117838207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117844109_117844207_117876591
transcript_36058.known	chr11	-	1678	8	FSM	ENSG00000137726.17	ENST00000526014.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_7	44.0903525011251	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCGGAGGTGCTTTCC	-18	True	NA	-9	True	AATAAA	-18	NA	117876658	117836980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_36060.known	chr11	-	669	7	FSM	ENSG00000137726.17	ENST00000584394.5	669	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	163.285707342138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGCCACATGGCCATCT	-24	True	NA	NA	False	NA	NA	NA	117876664	117837945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117838278_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_36061.known	chr11	-	656	7	FSM	ENSG00000137726.17	ENST00000540359.6	656	7	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_6	41.3870618537834	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCATGCCAACACCAGGAA	3	True	NA	NA	False	GGGGCT	-45	NA	117876729	117839576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_36063.known	chr11	-	991	6	FSM	ENSG00000137731.14	ENST00000534383.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.49857113690718	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACCTGCCTGCCTGTCT	-2	True	NA	-10	True	AATAAA	-25	NA	117824744	117820146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117824161
transcript_3607.known	chr1	-	1574	5	FSM	ENSG00000132881.12	ENST00000375599.8	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	5.1720402163943	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGACGTGTTCGTTC	-3	True	NA	-4	True	GATAAA	-22	NA	16237183	16231691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16232298_16232509_16232647_16232892_16233018_16233611_16233765_16236630
transcript_36070.known	chr11	-	2592	9	FSM	ENSG00000137747.16	ENST00000526090.1	2592	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31695671910659	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCAGAGCAGTTAGATC	NA	False	NA	NA	False	NA	NA	NA	117929459	117907453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117908785_117909805_117909969_117910706_117910751_117911767_117911861_117913776_117913907_117914391_117914515_117917169_117917275_117918408_117918839_117929286
transcript_36072.known	chr11	+	3653	7	FSM	ENSG00000110324.11	ENST00000227752.8	3653	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.74535599249993	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTGTGAAACTAGTCAGAT	-3	True	NA	8	True	AATAAA	-19	NA	117986393	118001483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117986535_117988381_117988503_117989441_117989621_117993240_117993411_117993998_117994150_117995588_117995711_117998714
transcript_36073.known	chr11	-	4487	5	FSM	ENSG00000177098.9	ENST00000324727.9	4487	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.34477204006491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGATTTGGGGGCTTCC	-16	True	NA	NA	False	AATAAA	-16	NA	118152823	118133376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118137121_118141206_118141337_118143832_118144062_118145056_118145230_118152612
transcript_36075.known	chr11	-	566	3	FSM	ENSG00000177098.9	ENST00000529878.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCGTAGAACCCACGTGC	11	True	NA	NA	False	NA	NA	NA	118152888	118136960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118137121_118141206_118141337_118152612
transcript_36076.known	chr11	-	4937	4	FSM	ENSG00000149575.9	ENST00000278947.6	4937	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGAGTGTGGCTTTAT	-23	True	NA	-3	True	AATAAA	-17	NA	118176639	118162805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118167087_118168084_118168296_118168584_118168752_118176361
transcript_36077.known	chr11	-	3983	6	FSM	ENSG00000160588.10	ENST00000278949.9	3983	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.28952211790544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGTGTGTGCATATC	-37	True	NA	-5	True	AATAAA	-22	NA	118252365	118226689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118237049_118237261_118240210_118240378_118252221
transcript_36078.known	chr11	-	963	5	FSM	ENSG00000160588.10	ENST00000446386.2	963	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	10.6154368727811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATATGTATTCTTTGTTT	8	True	NA	NA	False	NA	NA	NA	118252320	118229453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118240210_118240378_118252221
transcript_36079.known	chr11	-	2622	6	FSM	ENSG00000149573.9	ENST00000278937.7	2622	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.78273291792038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTATATACATATCTA	12	True	NA	2	True	AATAAA	-33	NA	118264297	118253415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118255234_118257237_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_3608.known	chr1	-	336	4	FSM	ENSG00000132881.12	ENST00000434014.1	336	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	6.59966329107444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGACGTGCCCGAGCGG	521	False	NA	NA	False	NA	NA	NA	16236659	16232280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16232298_16232509_16232647_16233611_16233765_16236630
transcript_36081.known	chr11	-	1370	5	FSM	ENSG00000149573.9	ENST00000438295.2	1370	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.96865172858795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTATCTGCTTATTCT	NA	False	NA	-4	True	AATAAA	-37	NA	118264536	118256910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_36082.known	chr11	+	6088	20	FSM	ENSG00000110344.10	ENST00000252108.8	6088	20	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_11	27.3358105311718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTATCACTTTATTC	-10	True	NA	15	True	AATAAA	-19	NA	118359599	118399211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118359675_118365039_118365202_118368630_118368805_118369422_118369536_118371513_118371667_118372506_118372667_118373085_118373289_118373493_118373686_118374895_118375230_118376573_118376695_118379445_118379751_118381390_118381524_118382588_118382777_118384634_118384736_118384831_118384946_118386437_118386613_118389724_118389906_118390656_118390805_118392737_118392896_118396313
transcript_36084.known	chr11	+	6061	20	FSM	ENSG00000110344.10	ENST00000431736.6	6061	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	65.1985248715748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTTGTTATCACTTT	34	True	NA	11	True	AATAAA	-15	NA	118359643	118399207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118359675_118365039_118365202_118368630_118368805_118369422_118369536_118371513_118371667_118372506_118372688_118373085_118373289_118373493_118373686_118374895_118375230_118376573_118376695_118379445_118379751_118381390_118381524_118382588_118382777_118384634_118384736_118384831_118384946_118386437_118386613_118389724_118389906_118390656_118390805_118392737_118392896_118396313
transcript_36085.known	chr11	-	1819	13	FSM	ENSG00000118096.10	ENST00000264020.6	1819	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	24.2498568151557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-6	True	NA	NA	False	AGTAAA	-17	NA	118566035	118544542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118557737_118557891_118559784_118559865_118564964_118565062_118565789
transcript_36086.known	chr11	-	1562	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_9	9.78022967838606	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-11	True	NA	NA	False	AGTAAA	-17	NA	118565931	118544542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
transcript_36088.known	chr11	+	16600	36	FSM	ENSG00000118058.24	ENST00000534358.8	16600	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	18.0617082836162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTAAGCTTCCTTTTG	5	True	NA	11	True	AATAAA	-22	NA	118436491	118526832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118436945_118468774_118468845_118471661_118474316_118476804_118476983_118477966_118478202_118480173_118480239_118481714_118482093_118482421_118482496_118484182_118484315_118484861_118484976_118488613_118488761_118489791_118489888_118490128_118490250_118491195_118491319_118491743_118491929_118493056_118493231_118494287_118494399_118494693_118494768_118495699_118495894_118496260_118496368_118497935_118498074_118498369_118498529_118499302_118499421_118499834_118499914_118500986_118501148_118501671_118501858_118502397_118506647_118507528_118507610_118509135_118509201_118509947_118510119_118511950_118512026_118519617_118519793_118519956_118520065_118520801_118520886_118521287_118521418_118521896
transcript_3609.known	chr1	-	6227	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_8	8.24621125123532	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-24	True	NA	0	True	AATAAA	-18	NA	16352480	16246839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
transcript_36091.known	chr11	+	3994	10	FSM	ENSG00000095139.15	ENST00000264028.5	3994	10	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_3	89.8356524128614	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTGTGAGAGTATTCA	1	True	NA	23	True	ATTAAA	-30	NA	118572408	118603033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118572551_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_36094.known	chr11	+	2420	9	FSM	ENSG00000149582.16	ENST00000313236.10	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	19.4036079119323	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	-5	True	NA	15	True	AATAAA	-15	NA	118531191	118535829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_36095.known	chr11	+	1456	9	FSM	ENSG00000149582.16	ENST00000354284.8	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.7182815193799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	2	True	NA	NA	False	NA	NA	NA	118531198	118546484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
transcript_36103.known	chr11	+	1709	9	FSM	ENSG00000095139.15	ENST00000392859.7	1709	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	357.988041001372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGTTAAATACCTCCT	-18	True	NA	NA	False	NA	NA	NA	118572389	118600993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118572551_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_36104.known	chr11	+	2395	8	FSM	ENSG00000149582.16	ENST00000359862.8	2395	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.1573309531525	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTCTGCTTCATTTC	83	False	NA	18	True	AATAAA	-18	NA	118531087	118535832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_36106.known	chr11	+	2228	8	FSM	ENSG00000149582.16	ENST00000442938.6	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	24.0586019238569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGATAAGTGTTATCA	83	False	NA	NA	False	AATAAA	-13	NA	118531087	118547280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118546118
transcript_36126.known	chr11	+	575	5	FSM	ENSG00000167283.9	ENST00000529770.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	3093.62756323382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	-2	True	NA	88	True	AATAAA	-17	NA	118401618	118409199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118401718_118403923_118403986_118405656_118405710_118406936_118407098_118408999
transcript_36127.known	chr11	+	586	5	FSM	ENSG00000149582.16	ENST00000534181.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	22.0836477965032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGCAGAAAAGAGAAGAAAA	-5	True	NA	NA	False	NA	NA	NA	118531191	118533525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531777_118531872_118532409_118532462_118532916_118533208_118533419
transcript_3613.known	chr1	+	3480	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	241.178126887346	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	3	True	NA	24	True	TATAAA	-33	NA	16367241	16398145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
transcript_36132.known	chr11	+	900	4	FSM	ENSG00000167283.9	ENST00000529790.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	3357.44466323224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTAGAGTACTTGT	4	True	NA	NA	False	NA	NA	NA	118401609	118409577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118401718_118405656_118405710_118406936_118407098_118408999
transcript_36136.known	chr11	+	457	3	FSM	ENSG00000167283.9	ENST00000529460.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3590.5	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	12	False	NA	88	True	AATAAA	-17	NA	118401632	118409199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118401729_118406936_118407098_118408999
transcript_36138.known	chr11	+	1982	1	FSM	ENSG00000118058.24	ENST00000647638.1	1982	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAAAACTGA	705	False	NA	NA	False	TTTAAA	-28	NA	118437191	118439173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118437200_118439200
transcript_36139.known	chr11	+	3098	6	FSM	ENSG00000149582.16	ENST00000524522.5	3098	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	27.0584552404604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTCTGCTTCATTTCTT	5	True	NA	20	True	AATAAA	-20	NA	118531201	118535834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118534506
transcript_36145.nic	chr11	+	5269	18	NIC	ENSG00000019144.20	novel	5242	18	NA	NA	-286	0	combination_of_known_junctions	TRUE	canonical	3	76	junction_6	50.087881246374	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	264	False	NA	40	True	AATAAA	-15	NA	118621076	118658025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_118621539_118624933_118625060_118627304_118628651_118631206_118631480_118631912_118632054_118632158_118632297_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_3615.known	chr1	+	892	4	FSM	ENSG00000055070.17	ENST00000471507.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	262.689085337696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGGGGGACCCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	16367087	16395406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16391374_16391425_16393230_16393483_16395037
transcript_36153.nnic	chr11	+	2885	13	Fusion	ENSG00000019144.20_ENSG00000284246.1	novel	2519	5	NA	NA	116	0	multi-exon	FALSE	canonical	3	9	junction_1	56.2175214877197	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	7	False	NA	40	True	AATAAA	-15	NA	118635144	118658025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_118635247_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_36160.known	chr11	-	6152	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	105.445911427074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTATGTC	-7	True	NA	-7	True	AATAAA	-17	NA	118790948	118747765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_36161.nnic	chr11	-	2613	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_13	94.2790770993131	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCCAAGTAAAAATTTCT	1796	False	NA	-26	True	AATACA	-16	NA	118791040	118751364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_36162.known	chr11	-	6128	14	FSM	ENSG00000110367.14	ENST00000534980.7	6128	14	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	37.0002398840776	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-16	True	NA	-4	True	AATAAA	-20	NA	118791164	118747762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_36177.nnic	chr11	-	1925	13	NNC	ENSG00000110367.14	novel	1936	13	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_12	96.5480234563781	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	9	True	NA	NA	False	AATAAA	-13	NA	118790969	118754588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_36178.nic	chr11	-	1941	13	ISM	ENSG00000110367.14	ENST00000534980.7	6128	14	-32	6826	-32	0	5prime_fragment	FALSE	canonical	3	333	junction_3	29.7324878429864	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	1640	False	NA	NA	False	AATAAA	-13	NA	118791196	118754588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_36180.nic	chr11	-	1457	5	ISM	ENSG00000110367.14	ENST00000534980.7	6128	14	-28	19864	-28	0	5prime_fragment	FALSE	canonical	3	352	junction_4	21.7082933460924	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGCTGAGGTCATGAGAA	1644	False	NA	NA	False	NA	NA	NA	118791192	118767626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_36182.known	chr11	-	1286	2	FSM	ENSG00000287238.1	ENST00000664961.1	1286	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	118729412	118721103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118722076_118729098
transcript_36184.known	chr11	-	738	2	FSM	ENSG00000110367.14	ENST00000533239.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTTGTATAAATGGTT	-1	True	NA	NA	False	NA	NA	NA	118791149	118785832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118786519_118791097
transcript_36187.known	chr11	+	1884	1	FSM	ENSG00000278376.1	ENST00000610705.1	1884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTCGTTATTTCTA	1	True	NA	5	True	AGTAAA	-14	NA	118791253	118793137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118791300_118793100
transcript_3619.known	chr1	+	3401	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	212	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	26	False	NA	21	True	TATAAA	-30	NA	16367264	16398142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16393230_16393483_16395037
transcript_36190.nic	chr11	-	2562	3	ISM	ENSG00000186174.13	ENST00000334801.7	10005	8	-232	12775	157	-3876	5prime_fragment	FALSE	canonical	1	2	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCCAGAGACTATTAAAT	-1	True	NA	NA	False	AGTAAA	-18	NA	118911136	118906649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_118907603_118908269_118908656_118909913
transcript_36194.known	chr11	+	1254	11	FSM	ENSG00000186166.9	ENST00000334418.6	1254	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	68.1073417481552	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTATCTACCTCCTAC	-20	True	NA	6	True	ATTAAA	-18	NA	118998137	119015793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011284_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
transcript_36196.known	chr11	+	1119	11	FSM	ENSG00000186166.9	ENST00000532132.5	1119	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	88.3962103260089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCTATTATACCTTC	10	True	NA	-77	True	NA	NA	NA	118998167	119015641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015287_119015440_119015537
transcript_36203.known	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_3	7512.68984369114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-23	True	NA	-10	True	AATAAA	-17	NA	119018678	119015711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
transcript_36204.known	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	7693.60458432847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	8776	False	NA	-10	True	AATAAA	-17	NA	119018330	119015711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
transcript_36205.known	chr11	-	483	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	8537	junction_1	4545.01470707191	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATGAGTATGTCT	-2	True	NA	-15	True	AATAAA	-12	NA	119018343	119015716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
transcript_36218.nic	chr11	-	2676	10	ISM	ENSG00000137700.18	ENST00000545985.5	2606	11	38	5	4	0	intron_retention	TRUE	non_canonical	0	0	junction_6	101.329800133336	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGTCAGTGATTCATT	12	True	NA	-7	True	ATTAAA	-17	NA	119030868	119024355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030231
transcript_36219.known	chr11	-	2102	10	FSM	ENSG00000137700.18	ENST00000330775.9	2102	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	100.873346820483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-26	True	NA	-2	True	ATTAAA	-22	NA	119030906	119024350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030848
transcript_3622.known	chr1	+	3447	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	237	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	58	False	NA	24	True	TATAAA	-33	NA	16367224	16398145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16393227_16393483_16395037
transcript_36229.known	chr11	-	1912	9	FSM	ENSG00000137700.18	ENST00000638360.1	1912	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	102.30950285775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGTTGGATATAGGTGG	-10	True	NA	-75	True	NA	NA	NA	119030890	119024423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027771_119028193_119028427_119029221_119029565_119030848
transcript_36232.nic	chr11	-	2734	9	NIC	ENSG00000137700.18	novel	2304	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_8	87.6994156194897	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGTCAGTGATTCATT	17	True	NA	-7	True	ATTAAA	-17	NA	119030863	119024355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030169
transcript_36233.nic	chr11	-	2677	9	ISM	ENSG00000137700.18	ENST00000525102.5	2844	10	38	242	4	0	intron_retention	FALSE	canonical	3	74	junction_8	71.5856130797243	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGTCAGTGATTCATT	12	True	NA	-7	True	ATTAAA	-17	NA	119030868	119024355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030231
transcript_36234.known	chr11	-	2040	9	FSM	ENSG00000137700.18	ENST00000527992.5	2040	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	70.7149869193228	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAGAAGATTAAAACTA	0	True	NA	-39	True	AAGAAA	-10	NA	119030880	119024387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030848
transcript_3624.known	chr1	+	981	9	FSM	ENSG00000157191.20	ENST00000459640.5	981	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	181.357381983751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAAGCCCTCCTCAGCT	27	True	NA	NA	False	NA	NA	NA	16440755	16458956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16450124_16450242_16451837_16452016_16455817_16455894_16458841
transcript_36252.known	chr11	+	583	5	FSM	ENSG00000196655.12	ENST00000528230.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	447.146718091501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGAGAGTTCCTGCA	-6	True	NA	NA	False	NA	NA	NA	119018765	119023421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019189_119020149_119020254_119021759_119021887_119023320
transcript_36254.known	chr11	+	1425	5	FSM	ENSG00000196655.12	ENST00000533632.6	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_2	100.131163980052	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCCACAACCCAATAGCT	-6	True	NA	NA	False	AGTAAA	-39	NA	119018765	119024134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021759_119021887_119023320
transcript_36256.known	chr11	+	768	5	FSM	ENSG00000196655.12	ENST00000525079.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	450.563189242086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGCTGAACCTGTTATG	18	True	NA	NA	False	NA	NA	NA	119018789	119023394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019425_119020149_119020254_119021759_119021887_119023320
transcript_36258.known	chr11	+	817	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	502.260888383716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	23	True	NA	20	True	AATAAA	-12	NA	119018794	119023659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
transcript_36262.known	chr11	+	654	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	524.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	-6	True	NA	3	True	CATAAA	-7	NA	119018765	119023642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119021759_119021887_119023320
transcript_36269.known	chr11	-	4598	26	FSM	ENSG00000149428.20	ENST00000617285.5	4598	26	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_25	157.510055552019	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-7	True	NA	-6	True	AATAAA	-16	NA	119057205	119044187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_36271.known	chr11	-	4367	26	FSM	ENSG00000149428.20	ENST00000652093.1	4367	26	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	282.027051184811	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTCTGTATGTTTGAA	-4	True	NA	67	True	NA	NA	NA	119057227	119044310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
transcript_36284.known	chr11	-	4360	25	FSM	ENSG00000149428.20	ENST00000612687.4	4360	25	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_9	305.48912282873	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTTGTGCTGTGAG	66	False	NA	-10	True	AATAAA	-12	NA	119057157	119044191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_3632.known	chr1	+	2018	8	FSM	ENSG00000157191.20	ENST00000337132.10	2018	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_4	35.860273056315	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATGTGAAAGATGAATG	-5	True	NA	11	True	AATAAA	-18	NA	16440723	16460078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_3633.known	chr1	+	935	8	FSM	ENSG00000157191.20	ENST00000457722.6	935	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	138.918269908194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTGGGATTCAAGTATG	-5	True	NA	NA	False	AGTAAA	-20	NA	16440723	16459073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440776_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_36336.known	chr11	+	3181	16	FSM	ENSG00000160695.16	ENST00000621676.5	3181	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.2556547240586	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGGATTTTTTTCTGG	16	True	NA	18	True	AATAAA	-20	NA	119067817	119081972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119068011_119069195_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
transcript_3634.known	chr1	+	1929	7	FSM	ENSG00000157191.20	ENST00000443980.6	1929	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	152.545894733356	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	7	True	NA	10	True	AATAAA	-17	NA	16440735	16460077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16458841
transcript_36344.nnic	chr11	+	1453	15	NNC	ENSG00000256269.11	novel	1505	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	201.402391915756	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGCGCGTGTGGAG	NA	False	NA	16	True	AATAAA	-16	NA	119084859	119093548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109_119093274_119093345
transcript_36347.known	chr11	+	1448	14	FSM	ENSG00000256269.11	ENST00000442944.7	1448	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	207.652873749273	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	-14	True	NA	-20	True	GGGGCT	-39	NA	119084882	119093512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_36350.known	chr11	+	1559	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	204.764780625515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCCTACTAATAAACCA	-12	True	NA	-16	True	GGGGCT	-43	NA	119084884	119093516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_36356.known	chr11	+	1351	13	FSM	ENSG00000256269.11	ENST00000544387.5	1351	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	212.214252322715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGCGCGTGTGGAG	17	True	NA	16	True	AATAAA	-16	NA	119084913	119093548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_36362.nic	chr11	+	1450	13	NIC	ENSG00000256269.11	novel	1505	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	206.678275883611	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTGCGCGTGTGG	-18	True	NA	14	True	AATAAA	-14	NA	119084878	119093546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_36367.known	chr11	+	1347	12	FSM	ENSG00000256269.11	ENST00000543090.5	1347	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	293.550001372484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTGAAGGTGTTGTG	33	False	NA	1	True	AATAAA	-1	NA	119084929	119093533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_36368.known	chr11	+	1544	12	FSM	ENSG00000256269.11	ENST00000542044.5	1544	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	214.883170256547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGGTTGCTG	12	True	NA	NA	False	NA	NA	NA	119084908	119093296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088634_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_36374.known	chr11	+	562	7	FSM	ENSG00000256269.11	ENST00000543821.5	562	7	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_6	293.1094315932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCCTGCCAGAGAAGA	-9	True	NA	NA	False	NA	NA	NA	119084887	119090046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089776_119089989
transcript_36375.known	chr11	-	1373	2	FSM	ENSG00000188486.4	ENST00000375167.1	1373	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGAGCGTTTGTTTT	6700	False	NA	-28	True	ATTAAA	-15	NA	119095449	119093878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119094262_119094459
transcript_36376.known	chr11	-	1614	1	FSM	ENSG00000188486.4	ENST00000530167.2	1592	1	-2	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	1319	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAGAGTTGTAGAATT	-3	True	NA	-3	True	ATTAAA	-40	NA	119095467	119093853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119093900_119095500
transcript_3638.known	chr1	+	572	2	FSM	ENSG00000157191.20	ENST00000486390.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTATGGCTATTTTG	7	True	NA	NA	False	ATTAAA	-29	NA	16440735	16441619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16441165
transcript_36382.known	chr11	-	1760	9	FSM	ENSG00000172269.20	ENST00000682811.1	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	138.533163899479	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_36383.known	chr11	-	1719	9	FSM	ENSG00000172269.20	ENST00000639704.1	1719	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	145.02020333388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAAGTGTTCTGAT	0	True	NA	-95	True	NA	NA	NA	119101837	119096594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100751_119101017_119101139_119101494
transcript_36385.nnic	chr11	-	1729	9	NNC	ENSG00000172269.20	novel	1913	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_8	139.434348350756	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	651	False	NA	-10	True	AATAAA	-18	NA	119101498	119096509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101323
transcript_36386.known	chr11	-	1813	9	FSM	ENSG00000172269.20	ENST00000640747.1	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	140.324400942958	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAAATTAAGTGTTCTG	-19	True	NA	-97	True	NA	NA	NA	119101856	119096596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100828_119101017_119101139_119101494
transcript_36389.known	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000392834.7	1817	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	151.455523207984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-1	True	NA	-10	True	AATAAA	-18	NA	119101878	119096509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
transcript_36390.known	chr11	-	1689	8	FSM	ENSG00000172269.20	ENST00000682946.1	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	143.590119607791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_36396.known	chr11	-	2558	6	FSM	ENSG00000172269.20	ENST00000682691.1	2558	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_5	57.159426169268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAAGTGTTGTCTTTTTC	-1	True	NA	-33	True	NA	NA	NA	119101878	119096532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119098044_119098402_119098488_119100261_119100409_119100629_119101139_119101494
transcript_3640.known	chr1	+	327	2	FSM	ENSG00000224174.2	ENST00000452795.2	327	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAATTACGTTGGTT	NA	False	NA	14	True	AATAAA	-19	NA	16520693	16521796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16520788_16521563
transcript_36401.known	chr11	-	1791	8	FSM	ENSG00000172269.20	ENST00000682791.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	154.53604031132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100878_119101494
transcript_36402.known	chr11	-	3267	4	FSM	ENSG00000172269.20	ENST00000682517.1	3267	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_2	24.7969532178631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTCTTTTTCTTATT	10	True	NA	-28	True	NA	NA	NA	119101867	119096527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119098488_119100261_119100409_119100629
transcript_36414.nnic	chr11	+	2308	11	NNC	ENSG00000172273.13	novel	3185	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	54.706855146316	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	-23	True	NA	28	True	AATAAA	-19	NA	119121568	119135054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_119121640_119123567_119123685_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_36425.known	chr11	+	1466	10	FSM	ENSG00000172273.13	ENST00000527410.3	1466	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	49.2997883951084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACCCCAGTTCTGTCA	24	True	NA	NA	False	NA	NA	NA	119121615	119134314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134021
transcript_36426.known	chr11	+	3185	10	FSM	ENSG00000172273.13	ENST00000350777.7	3185	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	16.5864737394996	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGTCTATTTGTGG	-12	True	NA	NA	False	AATAAA	-28	NA	119121579	119136059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_36437.nic	chr11	+	1989	9	NIC	ENSG00000172273.13	novel	3185	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	51.424550314028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	-12	True	NA	28	True	AATAAA	-19	NA	119121579	119135054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119121640_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_36439.known	chr11	+	3812	15	FSM	ENSG00000172350.10	ENST00000619701.5	3812	15	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_9	4.60921880140048	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATGTGTAAATGTGTGT	8	True	NA	14	True	AATAAA	-19	NA	119149051	119162653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119149364_119149953_119150204_119154025_119154144_119154259_119154393_119154524_119154576_119154769_119154916_119156328_119156453_119156563_119156679_119156871_119157015_119158233_119158333_119158556_119158726_119158828_119158930_119160226_119160386_119160537_119160657_119160880
transcript_36440.nic	chr11	+	3550	15	NIC	ENSG00000172350.10	novel	3812	15	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.25316246521123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATGTGTAAATGTGTGT	154	False	NA	14	True	AATAAA	-19	NA	119149230	119162653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119149281_119149953_119150204_119154025_119154144_119154259_119154393_119154524_119154576_119154769_119154916_119156328_119156453_119156563_119156679_119156871_119157015_119158233_119158333_119158556_119158726_119158828_119158930_119160226_119160386_119160537_119160657_119160880
transcript_36449.known	chr11	+	3716	10	FSM	ENSG00000160703.16	ENST00000409991.5	3716	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	25.4252717673665	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	8	True	NA	12	True	ATTAAA	-18	NA	119168727	119184012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_36450.nic	chr11	+	3036	10	NIC	ENSG00000160703.16	novel	2850	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	36.0999982900721	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	-11	True	NA	16	True	ATTAAA	-22	NA	119168708	119184016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
transcript_36452.nic	chr11	+	3887	10	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	25.4252717673665	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	-11	True	NA	16	True	ATTAAA	-22	NA	119168708	119184016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169043_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_36453.nic	chr11	+	3184	10	NIC	ENSG00000160703.16	novel	2850	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	36.0999982900721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	-11	True	NA	16	True	ATTAAA	-22	NA	119168708	119184016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169043_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
transcript_36455.known	chr11	+	4131	10	FSM	ENSG00000160703.16	ENST00000409109.6	4131	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	24.0066863114075	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	5	True	NA	16	True	ATTAAA	-22	NA	119168724	119184016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119169303_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_36457.nic	chr11	+	3444	10	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	35.2329111015732	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	-11	True	NA	16	True	ATTAAA	-22	NA	119168708	119184016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169303_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
transcript_3646.nic	chr1	-	1255	4	NIC	ENSG00000219481.11	novel	5932	29	NA	NA	-16	-441	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	69.3733858671081	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATATGTCCAAATACAT	-20	True	NA	NA	False	NA	NA	NA	16613578	16594002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16594662_16594930_16595014_16608507_16608780_16613337
transcript_36461.known	chr11	+	3744	10	FSM	ENSG00000160703.16	ENST00000292199.6	3744	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	29.4798529235656	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGCCTCTTCTTTAC	9	True	NA	14	True	ATTAAA	-20	NA	119168728	119184014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119168922_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_36467.nic	chr11	+	3574	9	NIC	ENSG00000160703.16	novel	2850	9	NA	NA	-4	-1081	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	26.4264900242162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTAGTATTAGTCCCT	-11	True	NA	NA	False	AAAACA	-36	NA	119168708	119182931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169043_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093
transcript_36486.known	chr11	+	2585	7	FSM	ENSG00000160703.16	ENST00000481860.6	2585	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	39.3591017286839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAGGAGAGTCTAGGC	22	False	NA	NA	False	NA	NA	NA	119168741	119181357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119168895_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170
transcript_36490.known	chr11	+	3030	17	FSM	ENSG00000110395.7	ENST00000637974.1	3030	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	47.7941141119908	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATTCTAGAAATATTTC	83	False	NA	NA	False	AATAAA	-14	NA	119206423	119313926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119206613_119232447_119232696_119271734_119271882_119273867_119274025_119274831_119274954_119275996_119276135_119277756_119277845_119278165_119278298_119278509_119278714_119284968_119285101_119285188_119285567_119287851_119287947_119296917_119297035_119297383_119297482_119298357_119298541_119299494_119299588_119313417
transcript_36502.known	chr11	-	3327	16	FSM	ENSG00000076706.17	ENST00000264036.6	3327	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	5.39382362831168	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACATTGCTTTTTATTC	-2	True	NA	-4	True	AATAAA	-19	NA	119317130	119308528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119309916_119310348_119310467_119310755_119310904_119311089_119311186_119311279_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
transcript_3651.known	chr1	-	2752	3	FSM	ENSG00000219481.11	ENST00000599069.5	2752	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	87.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTGCTTAGAAATAAAT	-4	True	NA	NA	False	AATAAA	-35	NA	16613562	16599588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16601844_16608507_16608780_16613337
transcript_36512.known	chr11	+	2783	1	FSM	ENSG00000173456.5	ENST00000311413.5	2783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1534	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTCTGTGTGCATC	2	True	NA	17	True	AATAAA	-17	NA	119334526	119337309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119334500_119337300
transcript_36514.known	chr11	+	3844	3	FSM	ENSG00000245248.8	ENST00000660630.1	3844	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGGAGTGTGCACCTA	6	True	NA	NA	False	NA	NA	NA	119381809	119413071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119381909_119394980_119395155_119409500
transcript_36516.known	chr11	+	2525	4	FSM	ENSG00000245248.8	ENST00000498979.7	2525	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.76029781788188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAATAAACCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	119381770	119500595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119381909_119394980_119395155_119469808_119469976_119498549
transcript_36517.known	chr11	+	555	3	FSM	ENSG00000245248.8	ENST00000656105.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATGTCTCATACTTC	6	True	NA	4	True	TTTAAA	-7	NA	119381809	119409765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119381909_119394980_119395155_119409483
transcript_36519.known	chr11	-	3697	13	FSM	ENSG00000036672.16	ENST00000260187.7	3697	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	9.06879570591132	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCAGATGTTGGAATCT	-11	True	NA	-6	True	AATAAA	-20	NA	119381690	119355214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119372706_119373522_119381472
transcript_36522.known	chr11	-	1704	12	FSM	ENSG00000036672.16	ENST00000525735.1	1704	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	10.0888613810946	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAAGACCCTCGCTGCG	-15	True	NA	NA	False	NA	NA	NA	119364207	119356533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119363848
transcript_36523.known	chr11	-	2903	12	FSM	ENSG00000036672.16	ENST00000455332.6	2903	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	12.2359718970118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCAGATGTTGGAATCT	6	False	NA	-6	True	AATAAA	-20	NA	119381711	119355214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119381472
transcript_36529.known	chr11	-	581	4	FSM	ENSG00000154096.14	ENST00000524970.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	527.764046605004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAAGTGGGGACCCCA	2	True	NA	NA	False	NA	NA	NA	119423172	119419307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119419432_119420050_119420387_119420868_119420930_119423112
transcript_36530.known	chr11	-	897	4	FSM	ENSG00000154096.14	ENST00000528295.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	516.431559410882	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTGGGATGGTGGGGTA	2	True	NA	70	True	NA	NA	NA	119423172	119419072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119419521_119420050_119420379_119420868_119420930_119423112
transcript_36531.known	chr11	-	602	4	FSM	ENSG00000154096.14	ENST00000532974.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	519.259943466554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCCTGCTCTCCCT	1	True	NA	NA	False	NA	NA	NA	119423199	119419464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119419521_119420050_119420449_119420868_119420930_119423112
transcript_36537.known	chr11	-	610	2	FSM	ENSG00000154096.14	ENST00000533840.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGGCACTGCTGGTGCC	-1	True	NA	NA	False	NA	NA	NA	119423201	119420408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119420930_119423112
transcript_36539.known	chr11	-	1377	8	FSM	ENSG00000110400.11	ENST00000341398.6	1377	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.0613655273833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGACCACCCAGCCTGG	904	False	NA	NA	False	NA	NA	NA	119728553	119638097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119638248_119638730_119638807_119639864_119640013_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
transcript_36540.known	chr11	-	5956	6	FSM	ENSG00000110400.11	ENST00000264025.8	5956	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	24.1876001289917	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGCATCCCATCACT	-9	True	NA	NA	False	AATAAA	-15	NA	119729200	119660991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119665298_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
transcript_36542.known	chr11	-	1059	6	FSM	ENSG00000110400.11	ENST00000340882.2	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	28.4042250378355	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGACTTCACCTGGGAC	904	False	NA	NA	False	NA	NA	NA	119728553	119674591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119674648_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
transcript_36545.known	chr11	+	2262	4	FSM	ENSG00000184232.9	ENST00000328965.9	2262	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.31245915016974	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGAAGTGAATTCTTGCA	12	True	NA	NA	False	TATAAA	-17	NA	120211031	120230334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120211511_120225660_120225796_120226815_120226997_120228867
transcript_3655.known	chr1	-	2755	3	FSM	ENSG00000219481.11	ENST00000449853.2	2755	3	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	67.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTTCTGGACATAGGT	24	True	NA	-2	True	AATAAA	-25	NA	16613534	16605405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16607692_16608507_16608780_16613337
transcript_36550.known	chr11	+	3068	13	FSM	ENSG00000137709.10	ENST00000543440.7	3068	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1.7950549357115	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACTGTTGATAAGAAGA	-4	True	NA	NA	False	AATAAA	-25	NA	120240139	120319945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120240372_120246448_120246518_120269209_120269245_120298264_120298391_120299623_120299727_120302285_120302369_120305029_120305213_120305643_120305786_120307478_120307616_120309424_120309587_120315360_120315428_120317228_120317365_120318352
transcript_36553.known	chr11	+	3930	4	FSM	ENSG00000181264.9	ENST00000529187.1	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	24.2624538467705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	8	True	NA	NA	False	AGTAAA	-16	NA	120325306	120333682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120325369_120327121_120327641_120329976_120330050_120330406
transcript_36554.known	chr11	+	3980	3	FSM	ENSG00000181264.9	ENST00000375095.3	3980	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTCTTTATATTTAT	0	True	NA	NA	False	AGTAAA	-20	NA	120325298	120333686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120325369_120327440_120327641_120329976
transcript_36557.known	chr11	+	1434	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	27.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGATGTTCAGGCAGTT	-3	True	NA	NA	False	NA	NA	NA	120325295	120330818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120325369_120327121_120327641_120329976
transcript_36559.nic	chr11	+	2550	6	ISM	ENSG00000196914.9	ENST00000356641.7	6891	40	-509	61283	-8	13940	5prime_fragment	FALSE	canonical	2	19	junction_4	9.17387595294377	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGACTGCTTGAACTG	16	True	NA	NA	False	NA	NA	NA	120336404	120425777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_120337276_120406117_120406142_120407737_120407824_120420752_120420852_120421802_120421853_120424357
transcript_36560.known	chr11	+	3593	21	FSM	ENSG00000149403.13	ENST00000638419.1	3593	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.25998466254061	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTTTTCTTTTCTGGA	9	True	NA	-1	True	ATTAAA	-4	NA	120511745	120986685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120511888_120653687_120653793_120660268_120660401_120802692_120802858_120815377_120815476_120819754_120819921_120831851_120832031_120836790_120836845_120861958_120862121_120874065_120874219_120875138_120875244_120898531_120898640_120905289_120905494_120940346_120940461_120952854_120952965_120956779_120956954_120960908_120961075_120962455_120962682_120967194_120967324_120982105_120982225_120985903
transcript_36565.known	chr11	+	5142	8	FSM	ENSG00000154114.13	ENST00000422003.6	5142	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	6.67006715995929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTGTTCTGATTTTT	17	True	NA	NA	False	ATTAAA	-16	NA	121024120	121090775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121024292_121045673_121045824_121047527_121047668_121053550_121053733_121055051_121055309_121058344_121058472_121059968_121060086_121086777
transcript_36567.known	chr11	+	6854	5	FSM	ENSG00000109929.10	ENST00000264027.9	6854	5	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	87.3194565947361	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	-2	True	NA	14	True	AATAAA	-25	NA	121292770	121313410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_36569.known	chr11	+	2258	5	FSM	ENSG00000109929.10	ENST00000392789.2	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	272.607203683248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATCAGTTGAGTATTAT	79	False	NA	NA	False	AATAAA	-18	NA	121292851	121308633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121293079_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_36572.known	chr11	+	10863	48	FSM	ENSG00000137642.13	ENST00000260197.12	10863	48	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_16	32.2489186935559	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGGTCTGTTTTAAA	-1	True	NA	17	True	AATAAA	-28	NA	121452313	121633763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121452617_121470006_121470124_121478117_121478244_121488031_121488194_121490042_121490111_121496868_121497050_121513002_121513105_121514151_121514322_121520656_121520850_121522585_121522704_121522915_121522990_121532463_121532553_121543547_121543727_121545242_121545430_121549959_121550089_121550584_121550671_121553936_121554110_121555186_121555319_121557313_121557406_121558590_121558838_121559518_121559658_121566939_121567114_121570156_121570271_121574240_121574364_121577280_121577401_121583457_121583584_121586221_121586330_121588019_121588152_121589258_121589391_121590039_121590175_121591000_121591157_121595622_121595773_121604192_121604325_121605112_121605240_121605401_121605572_121606844_121606958_121607185_121607291_121608103_121608177_121611075_121611159_121612735_121612833_121614870_121615056_121618773_121618894_121619752_121619918_121621063_121621239_121622161_121622269_121625084_121625278_121627554_121627768_121629495
transcript_36579.nic	chr11	+	3630	23	ISM	ENSG00000137642.13	ENST00000260197.12	10863	48	0	63218	0	11708	5prime_fragment	TRUE	canonical	3	129	junction_16	12.2566392869975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTGATTTGGCAATCT	-1	True	NA	NA	False	AATAAA	-17	NA	121452313	121570545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_121452617_121470006_121470124_121478117_121478244_121488031_121488194_121490042_121490111_121496868_121497050_121513002_121513105_121514151_121514322_121520656_121520850_121522585_121522704_121522915_121522990_121532463_121532553_121543547_121543727_121545242_121545430_121549959_121550089_121550584_121550671_121553936_121554110_121555186_121555319_121557313_121557406_121558590_121558838_121559518_121559658_121566939_121567114_121570156
transcript_36581.known	chr11	+	2165	15	FSM	ENSG00000137642.13	ENST00000532451.1	2165	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	40.731136863634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAGGTAACGACACAGAC	4	False	NA	NA	False	NA	NA	NA	121452379	121547024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121452617_121470006_121470124_121478117_121478244_121488031_121488194_121490042_121490111_121496868_121497050_121513002_121513105_121514151_121514322_121520656_121520850_121522585_121522704_121522915_121522990_121532463_121532553_121543547_121543727_121545242_121545430_121546862
transcript_36584.known	chr11	+	6865	14	FSM	ENSG00000154127.10	ENST00000284273.6	6865	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	6.23314294765628	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGCAATGTCATTTTA	-1	True	NA	NA	False	AATAAA	-19	NA	122655721	122814473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_122656211_122776218_122776273_122777023_122777211_122779496_122779696_122783052_122783223_122789099_122789309_122794701_122794835_122796155_122796277_122796910_122797034_122798941_122799035_122801187_122801333_122806409_122806517_122808066_122808177_122809748
transcript_36589.known	chr11	+	2473	10	FSM	ENSG00000109943.9	ENST00000227348.9	2473	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCACATTGTAAGTCTGT	0	True	NA	NA	False	AATAAA	-20	NA	122838499	122872643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_122838593_122850067_122850215_122851692_122851846_122853942_122854087_122855694_122855857_122862463_122862545_122864635_122864720_122867408_122867556_122868012_122868100_122871268
transcript_36590.known	chr11	+	7057	9	FSM	ENSG00000109944.11	ENST00000227349.7	7057	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	1.72753437013566	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCTCTCTTATTAAAG	-2	True	NA	NA	False	AATAAA	-15	NA	122882758	122963862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_122882973_122885760_122886194_122903924_122904445_122924896_122925011_122934419_122935076_122946497_122946793_122956495_122956577_122957362_122957492_122959247
transcript_36601.known	chr11	-	5032	7	FSM	ENSG00000166250.12	ENST00000448775.4	5032	7	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_1	19.8382346884887	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTAGGAGAAGCTGAAG	-5	True	NA	-34	True	AATAAA	-14	NA	123195248	123069871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123073775_123074701_123074844_123083084_123083208_123083679_123083848_123084511_123084714_123097794_123097953_123194912
transcript_36628.known	chr11	-	2264	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_5	2043.38068146271	4268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-1	True	NA	NA	False	AATAAA	-26	NA	123062136	123057488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_36636.known	chr11	-	2004	8	FSM	ENSG00000109971.14	ENST00000453788.6	2004	8	0	0	0	0	multi-exon	FALSE	canonical	2	383	junction_1	2472.30562472378	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	655	False	NA	NA	False	AATAAA	-26	NA	123062335	123057488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123057829_123058766_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_36662.known	chr11	-	1509	5	FSM	ENSG00000109971.14	ENST00000527983.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_1	281.923194327817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTGAGAATGTTCAAGA	783	False	NA	89	True	NA	NA	NA	123062207	123059232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_36663.known	chr11	-	2186	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_5	2153.0990100176	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	1658	False	NA	NA	False	AATAAA	-18	NA	123061332	123057496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
transcript_36665.known	chr11	+	1180	2	FSM	ENSG00000023171.20	ENST00000533341.3	1180	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAAATTCTTTTATT	-4	True	NA	11	True	AATAAA	-23	NA	123430268	123435715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_123431167_123435433
transcript_36668.known	chr11	-	4435	9	FSM	ENSG00000166261.11	ENST00000530393.6	4435	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	45.7875528937723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGAGGCTGGGCCGGT	-11	True	NA	NA	False	AATAAA	-33	NA	123741660	123723913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740193_123740416_123740537_123741548
transcript_36670.nic	chr11	-	3632	9	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	37.5699347883384	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-34	True	NA	-3	True	AGTAAA	-14	NA	123741683	123724779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740233_123740416_123740537_123741548
transcript_36682.known	chr11	-	3384	7	FSM	ENSG00000166261.11	ENST00000529691.1	3384	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	26.0154868406408	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-22	True	NA	-3	True	AGTAAA	-14	NA	123741671	123724779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123741548
transcript_36692.known	chr11	+	4300	19	FSM	ENSG00000110002.16	ENST00000456829.7	4300	19	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	67.0373030483775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGGCCCTACCTATG	-3	True	NA	NA	False	AGTAAA	-45	NA	124115449	124147721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_36696.known	chr11	+	3419	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_12	61.0468082930481	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	266	False	NA	17	True	ATTAAA	-27	NA	124115403	124146909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_3670.nnic	chr1	-	2895	14	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_13	37.4587741832753	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	12	True	NA	-7	True	AATAAA	-23	NA	16644674	16618255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644510
transcript_36702.known	chr11	+	1978	11	FSM	ENSG00000110002.16	ENST00000449321.5	1978	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	68.6393473162442	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	266	False	NA	18	True	AATAAA	-20	NA	124115403	124124841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_36705.known	chr11	+	1863	10	FSM	ENSG00000110002.16	ENST00000361352.9	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	41.3951151170709	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	266	False	NA	18	True	AATAAA	-20	NA	124115403	124124841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_3671.nic	chr1	-	2985	14	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-213	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	32.7300234932672	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	561	False	NA	-7	True	AATAAA	-23	NA	16644899	16618255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644645
transcript_36710.known	chr11	+	5144	9	FSM	ENSG00000154144.13	ENST00000441174.8	5144	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	63.3541632412583	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATCATCTGCATTT	-13	True	NA	3	True	AATAAA	-23	NA	124622863	124635926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626472_124626610_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_36718.known	chr11	+	1634	8	FSM	ENSG00000154144.13	ENST00000473629.6	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	69.2611149261714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	2950	False	NA	32	True	AATAAA	-11	NA	124622835	124632434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626812_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_36720.known	chr11	+	4468	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	49.4912896892174	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	-2	True	NA	14	True	AATAAA	-22	NA	124622874	124635398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_36723.known	chr11	+	3604	5	FSM	ENSG00000064199.7	ENST00000227135.7	3604	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	13.2759180473518	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCACTTCCACTGACATC	-5	True	NA	NA	False	NA	NA	NA	124673903	124697518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124673953_124675237_124675419_124681388_124681460_124691695_124691783_124694302
transcript_36732.known	chr11	+	3510	5	FSM	ENSG00000245498.7	ENST00000664095.1	3510	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAATGTTATCAGT	894	False	NA	NA	False	AATAAA	-5	NA	124800447	124809567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124800895_124801983_124802158_124804730_124804849_124805266_124805505_124807034
transcript_36738.known	chr11	+	1813	4	FSM	ENSG00000245498.7	ENST00000657884.1	1813	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTAGCACTTTGGGAGGC	1208	False	NA	NA	False	AAGAAA	-34	NA	124800761	124806654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124800895_124801983_124802158_124804730_124804849_124805266
transcript_36739.known	chr11	-	2528	4	FSM	ENSG00000120458.13	ENST00000674284.1	2528	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	49.6051072639367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	NA	False	NA	NA	False	ATTAAA	-14	NA	124800706	124766497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_124768029_124772993_124773055_124774718_124774819_124799870
transcript_36740.known	chr11	-	2384	4	FSM	ENSG00000120458.13	ENST00000374979.8	2384	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	60.4281023659982	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	-8	True	NA	NA	False	ATTAAA	-14	NA	124800406	124766497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_124768029_124772993_124773055_124774718_124774975_124799870
transcript_36744.known	chr11	+	1942	12	FSM	ENSG00000154134.15	ENST00000527196.5	1942	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.2930973947472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCCCTGTCTGTCTGGTT	NA	False	NA	18	True	AATAAA	-20	NA	124876120	124881470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124876461_124877160_124877185_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36748.nic	chr11	+	1847	12	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	32.7880748327752	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	230	False	NA	14	True	AATAAA	-16	NA	124876683	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36750.known	chr11	+	2139	12	FSM	ENSG00000154134.15	ENST00000525448.5	2139	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	33.4752900110263	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	32	False	NA	14	True	AATAAA	-16	NA	124876485	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877753_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36757.nic	chr11	+	1904	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	32.4215977397783	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	6	True	NA	14	True	AATAAA	-16	NA	124876431	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877659_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36758.nnic	chr11	+	1616	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	32.2708847105251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	0	True	NA	14	True	AATAAA	-16	NA	124876813	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877753_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36759.nic	chr11	+	1969	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	15	junction_1	30.5129480712697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	-17	True	NA	14	True	AATAAA	-16	NA	124876839	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36760.known	chr11	+	1645	11	FSM	ENSG00000154134.15	ENST00000525482.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.0838239667918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	-15	True	NA	13	True	AATAAA	-15	NA	124876841	124881465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124876933_124877160_124877185_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36762.nic	chr11	+	1721	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	30.7312544488506	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	332	False	NA	14	True	AATAAA	-16	NA	124876785	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36767.nic	chr11	+	2161	10	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_1	29.480690478873	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	0	True	NA	14	True	AATAAA	-16	NA	124876813	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36769.nnic	chr11	+	1620	10	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	29.0877769076995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	332	False	NA	14	True	AATAAA	-16	NA	124876785	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877266_124877310_124877518_124877753_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36775.nic	chr11	+	2578	9	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-24	0	intron_retention	FALSE	canonical	3	15	junction_1	31.2387479742707	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	336	False	NA	14	True	AATAAA	-16	NA	124876789	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124878437_124878583_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36780.known	chr11	+	2272	9	FSM	ENSG00000154134.15	ENST00000529658.5	2272	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	32.2170374181116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	16	False	NA	14	True	AATAAA	-16	NA	124876469	124881466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124876933_124877518_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_36796.known	chr11	-	2052	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAGCCTAGTTATAA	24	False	NA	-26	True	AATAAA	-4	NA	124953966	124949204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_124950560_124951338_124951551_124953481
transcript_36799.known	chr11	+	3924	16	FSM	ENSG00000149548.15	ENST00000529051.5	3924	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.00476028616731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTATTTCCTTGCAG	-14	True	NA	NA	False	AATAAA	-20	NA	124954120	125041487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124954371_124954723_124954910_124959114_124959265_124959814_124960004_124975095_124975210_124977477_124977601_124986741_124986889_124987126_124988135_124991460_124991584_124992579_124992688_124993168_124993244_125003866_125003960_125005108_125005213_125038430_125038605_125038887_125039070_125040589
transcript_36801.known	chr11	+	2696	19	FSM	ENSG00000134955.12	ENST00000308074.4	2696	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	2.69716357643075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCATGCTCATCTTTG	32	False	NA	2	True	AATAGA	-16	NA	125063335	125089235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125063427_125076756_125076839_125077229_125077324_125077449_125077529_125079111_125079248_125079683_125079761_125080613_125080781_125081420_125081459_125081753_125081907_125082243_125082335_125083814_125083878_125084233_125084320_125084824_125084874_125085065_125085140_125085394_125085474_125085576_125085675_125085953_125086019_125086203_125086261_125088118
transcript_36803.known	chr11	+	3951	18	FSM	ENSG00000134955.12	ENST00000403796.7	3951	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	2.66854028757971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGAGTCCACGCTGCT	1	True	NA	NA	False	AATAAA	-16	NA	125063304	125090516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125063427_125076756_125076839_125077229_125077324_125077449_125077529_125079111_125079248_125079683_125079761_125080613_125080781_125081420_125081459_125081753_125081907_125082243_125082335_125083814_125083878_125084233_125084320_125084824_125084874_125085065_125085140_125085394_125085474_125085576_125085675_125085953_125086019_125088118
transcript_36811.known	chr11	-	1828	5	FSM	ENSG00000150433.10	ENST00000531909.5	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	42.6321474945844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTACAACGGTCTC	20	True	NA	NA	False	NA	NA	NA	125111708	125096544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111538
transcript_36813.known	chr11	-	3805	5	FSM	ENSG00000150433.10	ENST00000682305.1	3805	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	31.5792653492763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGTATGAATAACAAAC	-15	True	NA	NA	False	ATTAAA	-16	NA	125111626	125094388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111538
transcript_36814.nic	chr11	-	1245	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	41.811332195949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111758	125097034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111584
transcript_36815.known	chr11	-	1034	5	FSM	ENSG00000150433.10	ENST00000279968.8	1034	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	46.6442654567526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	149	False	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102352_125102636_125102810_125111538
transcript_36818.known	chr11	-	773	5	FSM	ENSG00000150433.10	ENST00000531851.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	51.744564931981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTGGTTCTTTTTGAT	22	True	NA	NA	False	AAAAAG	-7	NA	125111589	125097256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125110490_125110550_125111538
transcript_36824.known	chr11	-	857	4	FSM	ENSG00000150433.10	ENST00000531262.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	45.5850852801659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGATGTTGGTCATTG	-6	True	NA	-128	True	NA	NA	NA	125111617	125097141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125111538
transcript_36826.known	chr11	+	3642	13	FSM	ENSG00000165495.16	ENST00000298282.14	3642	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.05986784905138	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGCACAATTCTCTT	-1	True	NA	30	True	AGTAAA	-19	NA	125164750	125433389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125164777_125235044_125235116_125331818_125331926_125351283_125351393_125367845_125367986_125385550_125385723_125397873_125398063_125410195_125410326_125410778_125410877_125411745_125411866_125429011_125429089_125429962_125430142_125431165
transcript_36831.known	chr11	+	1709	12	FSM	ENSG00000165495.16	ENST00000530517.5	1709	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.2962419891482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCTTCCCCAAATCAGT	NA	False	NA	NA	False	NA	NA	NA	125164686	125431501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125164777_125235044_125235116_125331818_125331926_125367845_125367986_125385550_125385723_125397873_125398063_125410195_125410326_125410778_125410877_125411745_125411866_125429011_125429089_125429962_125430142_125431165
transcript_36840.known	chr11	-	4583	10	FSM	ENSG00000149557.14	ENST00000278919.8	4583	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_6	98.1817412810939	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTTACT	-13	True	NA	NA	False	AATACA	-27	NA	125496265	125442880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
transcript_36851.known	chr11	-	1053	2	FSM	ENSG00000149557.14	ENST00000366139.3	1053	2	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTGATGTGGCCTTTG	-25	True	NA	NA	False	AGTAAA	-8	NA	125496277	125488926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125489823_125496120
transcript_36853.known	chr11	-	569	2	FSM	ENSG00000149557.14	ENST00000527534.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCGAGAACCTAGCTCC	211	False	NA	NA	False	AATGAA	-43	NA	125496122	125489540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125489823_125495835
transcript_3686.nnic	chr1	-	2714	13	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_12	28.4237527821754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-26	True	NA	-7	True	AATAAA	-23	NA	16644712	16618255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16643027_16643146_16644645
transcript_36864.nic	chr11	+	1948	12	NIC	ENSG00000149547.15	novel	2191	11	NA	NA	-84	0	combination_of_known_junctions	TRUE	canonical	3	74	junction_1	476.80591889942	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	125569373	125584251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_125569574_125570103_125570191_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_36868.known	chr11	+	2191	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_9	82.8483554453557	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	29	True	NA	22	True	ATTAAA	-22	NA	125569476	125584684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_36871.known	chr11	+	1544	11	FSM	ENSG00000149547.15	ENST00000534546.5	1544	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	393.109259621292	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTATTTTGTGAATT	10	True	NA	NA	False	NA	NA	NA	125569457	125584060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125575304_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_36875.known	chr11	+	1625	10	FSM	ENSG00000149547.15	ENST00000527235.6	1625	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	412.438817011418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	41	True	NA	NA	False	NA	NA	NA	125569488	125584242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125582345_125582421_125583520
transcript_3688.nnic	chr1	-	2662	13	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_10	39.1665780140841	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-32	True	NA	-7	True	AATAAA	-23	NA	16644718	16618255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16642766_16642851_16643027_16643146_16644645
transcript_36881.known	chr11	+	1407	10	FSM	ENSG00000149547.15	ENST00000615917.4	1407	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	415.577004794034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTGGATGAATGGA	10	True	NA	NA	False	NA	NA	NA	125569457	125584027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_36895.known	chr11	+	2402	19	FSM	ENSG00000134910.14	ENST00000529196.5	2402	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	391.758287156195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	-16	True	NA	23	True	NA	NA	NA	125592835	125620888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125593637_125593726_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_36897.known	chr11	+	4173	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	383.137361339665	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	6	True	NA	-20	True	AATGAA	-11	NA	125592857	125622721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_36905.known	chr11	+	4501	18	FSM	ENSG00000134910.14	ENST00000392708.9	4501	18	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_9	114.597505362438	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTGGGACCCAAAAAAGC	0	True	NA	NA	False	NA	NA	NA	125592851	125623091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_36916.known	chr11	+	2160	17	FSM	ENSG00000134910.14	ENST00000531491.5	2160	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	306.023072812737	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	15	True	NA	23	True	NA	NA	NA	125592866	125620888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_36928.known	chr11	+	1845	14	FSM	ENSG00000149554.14	ENST00000428830.6	1845	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	98.6919179799248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	-4	True	NA	20	True	AATAAA	-16	NA	125625973	125676255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
transcript_36933.known	chr11	+	4128	13	FSM	ENSG00000149554.14	ENST00000438015.7	4128	13	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	56.0674197333492	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	4182	False	NA	23	True	AATAAA	-25	NA	125625162	125657147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_36936.known	chr11	+	3390	13	FSM	ENSG00000149554.14	ENST00000532449.6	3390	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.76102178907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAATTTGTATAGAAT	224	False	NA	NA	False	NA	NA	NA	125626228	125656845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626643_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_36939.known	chr11	+	3513	13	FSM	ENSG00000149554.14	ENST00000534070.5	3513	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.5623732115341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	-46	True	NA	23	True	AATAAA	-25	NA	125626340	125657147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626576_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_36945.known	chr11	+	668	7	FSM	ENSG00000149554.14	ENST00000527013.6	668	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	130.070173368071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACCAACCCAGTGACA	13	False	NA	NA	False	TTTAAA	-34	NA	125626001	125635435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626030_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428
transcript_36947.known	chr11	+	1451	3	FSM	ENSG00000198331.11	ENST00000425380.7	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	6.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	-26	True	NA	14	True	ATTAAA	-17	NA	125887667	125900646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125887766_125891422_125891473_125899343
transcript_36948.known	chr11	-	1419	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	46	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTGTTGTGTTTTT	-13	True	NA	-5	True	ATTAAA	-17	NA	125903221	125893485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125894287_125895223_125895790_125903169
transcript_36949.known	chr11	-	1829	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	22.4845626053867	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	2	True	NA	-4	True	ATTAAA	-18	NA	125903206	125893484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
transcript_36950.known	chr11	+	7424	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_9	12.4322959854998	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGTCTATCTCAGTCT	14	True	NA	NA	False	AATAAA	-33	NA	125904507	125928843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_36951.known	chr11	-	2339	7	FSM	ENSG00000064309.16	ENST00000682556.1	2339	7	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_6	5.61001089323561	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTAAATTTGCATTTC	577	False	NA	NA	False	AGTAAA	-26	NA	126062723	126014305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126015511_126017087_126017376_126018329_126018474_126019618_126019766_126021247_126021521_126023400_126023538_126062578
transcript_36954.known	chr11	-	1791	7	FSM	ENSG00000165526.9	ENST00000526942.5	1791	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.0323396106332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTTAGCTCCAGCT	26	False	NA	NA	False	NA	NA	NA	126211629	126202781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209490_126209723_126210889_126211056_126211449
transcript_36957.known	chr11	-	2468	7	FSM	ENSG00000165526.9	ENST00000298317.9	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	5.98377435700541	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGATGACTATATTTGT	5	True	NA	-26	True	AATAAA	-19	NA	126211650	126202095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211449
transcript_36965.known	chr11	-	1030	3	FSM	ENSG00000165526.9	ENST00000532800.1	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGAGTGAG	25	False	NA	NA	False	NA	NA	NA	126211630	126209039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126209723_126210889_126211056_126211449
transcript_36967.known	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	1	101	junction_10	71.2001097000684	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	23	False	126268918	-28	True	AATAAA	-14	NA	126268895	126262937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
transcript_36976.known	chr11	+	1951	11	FSM	ENSG00000110074.12	ENST00000263578.10	1951	11	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_6	35.2335067797686	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	3	True	NA	17	True	AATACA	-17	NA	126269153	126278126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_36984.known	chr11	+	1825	11	FSM	ENSG00000110074.12	ENST00000687699.1	1827	11	2	0	2	0	multi-exon	FALSE	canonical	2	11	junction_1	96.0606058694197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAATCCATCTGGAGGCC	58	False	NA	NA	False	NA	NA	NA	126269208	126277931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269416_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_3699.known	chr1	-	2575	13	FSM	ENSG00000215908.10	ENST00000639456.1	2575	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	36.6563432437007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGACAAGAGTGTAACTA	0	True	NA	-24	True	AATAAA	-6	NA	16644686	16618272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16619104_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644645
transcript_36999.known	chr11	+	1760	10	FSM	ENSG00000110074.12	ENST00000527004.5	1760	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	132.917778353647	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTCGTCTGTTTA	39	True	NA	-40	True	NA	NA	NA	126269189	126278069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273338_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_37.known	ERCC-00104	+	2013	1	FSM	ERCC-00104A	DQ516815	2013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	2013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00104_+_0_2000
transcript_37006.known	chr11	+	1427	10	FSM	ENSG00000110074.12	ENST00000525770.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	99.7441170640599	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGCACAGGCAGTGAG	20	True	NA	NA	False	NA	NA	NA	126269170	126277840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269292_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_37010.known	chr11	+	2016	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_7	65.9506207324844	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTTCTCTGGGCAG	-5	True	NA	-15	True	TATAAA	-1	NA	126211781	126262968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_3702.nnic	chr1	-	2760	12	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-190	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_11	35.9352033940982	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	584	False	NA	-7	True	AATAAA	-23	NA	16644876	16618255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16644645
transcript_37038.known	chr11	+	1616	8	FSM	ENSG00000197798.9	ENST00000360194.8	1616	8	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_1	161.12791217425	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	-14	True	NA	-1	True	NA	NA	NA	126211772	126262631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_3704.nic	chr1	-	2555	12	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	38.1339526814024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-9	True	NA	-7	True	AATAAA	-23	NA	16644695	16618255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16643027_16643146_16644645
transcript_37047.known	chr11	+	1028	7	FSM	ENSG00000197798.9	ENST00000529731.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	203.384214945233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGGGGAATGTTGCAG	-14	True	NA	-90	True	NA	NA	NA	126211772	126262268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126211831_126234994_126235088_126240791_126241045_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_37066.known	chr11	+	2068	6	FSM	ENSG00000150455.14	ENST00000392680.6	2068	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.62168800331654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTACTTTTGTGCCCCCC	5	True	NA	NA	False	AATGAA	-19	NA	126283117	126294684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126283154_126289664_126289818_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_37070.known	chr11	+	5427	6	FSM	ENSG00000110063.10	ENST00000263579.5	5427	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	13.3356664625357	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTTGGTTTTTTTGC	-2	True	NA	14	True	AATAAA	-24	NA	126304059	126350005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126304282_126306569_126306745_126331404_126331551_126338285_126338400_126343306_126343418_126345346
transcript_37075.known	chr11	+	2189	5	FSM	ENSG00000150455.14	ENST00000392679.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.87228132326901	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAATCAG	11	True	NA	NA	False	NA	NA	NA	126283092	126294933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126283154_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_37079.known	chr11	+	1264	5	FSM	ENSG00000150455.14	ENST00000392678.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.08220700148449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCCTTGGTTTCCTC	-3	True	NA	17	True	CATAAA	-28	NA	126283109	126293244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126283154_126289664_126289834_126290461_126290586_126290802_126290962_126292476
transcript_37092.known	chr11	-	416	2	FSM	ENSG00000255062.2	ENST00000524964.2	423	2	5	2	3	-2	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTTTGAAGTGAATCG	-7	True	NA	-1	True	AATAAA	-38	NA	126304318	126294297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126294603_126304207
transcript_37093.known	chr11	-	1572	2	FSM	ENSG00000280832.2	ENST00000629441.2	1579	2	0	7	0	-7	multi-exon	FALSE	canonical	3	55	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACACAGGTGATCCTTT	1119	False	NA	NA	False	AATAAA	-15	NA	126355579	126340888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126342323_126355441
transcript_37096.known	chr11	-	3820	17	FSM	ENSG00000149571.12	ENST00000525144.7	3820	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.52069063257455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTGGCAATTAAACCT	-1	True	NA	NA	False	AATAAA	-19	NA	127000770	126423357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126425024_126425637_126425725_126429178_126429289_126431418_126431527_126435267_126435304_126436810_126437010_126440448_126440550_126444978_126445106_126446758_126446887_126449008_126449158_126456348_126456455_126463156_126463308_126473308_126473467_126521314_126521465_126526537_126526688_126562834_126562913_127000454
transcript_37097.known	chr11	-	3397	16	FSM	ENSG00000149571.12	ENST00000529097.6	3397	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.45143607047182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTTCTGTTCTTTT	2890	False	NA	2	True	AATAAA	-21	NA	127000520	126423494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126425024_126425637_126425725_126429178_126429289_126431418_126431527_126436810_126437010_126440448_126440550_126444978_126445106_126446758_126446887_126449008_126449158_126456348_126456455_126463156_126463308_126473308_126473467_126521314_126521465_126526537_126526688_126562834_126562913_127000454
transcript_37103.known	chr11	+	1810	11	FSM	ENSG00000110080.20	ENST00000444328.7	1810	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	6.98856208386246	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGATGTCCTGTGT	-14	True	NA	21	True	ATTAAA	-21	NA	126355685	126414638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_37104.known	chr11	+	1685	11	FSM	ENSG00000110080.20	ENST00000677503.1	1685	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	23.9924988277586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTAAACTATTTTTCCT	-12	True	NA	-8	True	NA	NA	NA	126355687	126414609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406546_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413586_126413649_126413960
transcript_37110.known	chr11	+	1919	11	FSM	ENSG00000110080.20	ENST00000534083.5	1919	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.8416229174934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGGACCTCATCTAGAAAA	121	False	NA	-42	True	NA	NA	NA	126355973	126414575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126356303_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_37115.known	chr11	+	1745	10	FSM	ENSG00000110080.20	ENST00000531217.5	1745	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.3657907309971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTAAACTATTTTTCC	-40	True	NA	-9	True	NA	NA	NA	126355659	126414608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_37120.known	chr11	+	2169	9	FSM	ENSG00000110080.20	ENST00000676545.1	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	6.55624702097168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACAGGGCCTGCCCTTT	-31	True	NA	NA	False	NA	NA	NA	126355668	126410575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267
transcript_37126.known	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	41.3306450738701	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	62	False	NA	-3	True	AATAAA	-15	NA	128587542	128536411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
transcript_37127.known	chr11	-	1298	3	FSM	ENSG00000254703.3	ENST00000526269.2	1298	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGAACTCCATCGCACT	NA	False	NA	NA	False	ATTAAA	-27	NA	128696023	128691671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_128692122_128692654_128693392_128695912
transcript_37132.nnic	chr11	-	4779	28	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	-144	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	36.5303113706141	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-31	True	NA	-9	True	AATAAA	-17	NA	129895595	129863779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129869913_129870179_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_37137.nic	chr11	-	5135	28	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	-144	combination_of_known_junctions	FALSE	canonical	3	21	junction_25	42.6833814996121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-31	True	NA	-9	True	AATAAA	-17	NA	129895595	129863779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
transcript_37144.known	chr11	-	5173	27	FSM	ENSG00000170322.15	ENST00000682444.1	5173	27	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_21	29.3768868209336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-14	True	NA	-4	True	AGTAAA	-18	NA	129895578	129863635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_37145.nic	chr11	-	5082	27	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	-144	combination_of_known_junctions	FALSE	canonical	3	50	junction_21	32.4463371260826	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-31	True	NA	-9	True	AATAAA	-17	NA	129895595	129863779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_37148.nic	chr11	-	4966	26	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	-144	combination_of_known_junctions	FALSE	canonical	3	37	junction_25	35.0645119743595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-31	True	NA	-9	True	AATAAA	-17	NA	129895595	129863779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_37149.nic	chr11	-	5002	26	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	-144	combination_of_known_junctions	FALSE	canonical	3	37	junction_25	37.7412241454884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-31	True	NA	-9	True	AATAAA	-17	NA	129895595	129863779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_37158.nic	chr11	-	1146	10	ISM	ENSG00000170322.15	ENST00000682444.1	5173	27	-17	18952	-5	2156	5prime_fragment	FALSE	canonical	3	80	junction_4	30.6086407553307	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-31	True	NA	NA	False	AAAAAG	-13	NA	129895595	129882587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_37160.nic	chr11	-	1182	10	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	2156	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	37.3154719177507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-31	True	NA	NA	False	AAAAAG	-13	NA	129895595	129882587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_37162.nic	chr11	-	1066	9	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	2156	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	44.3952418621636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-31	True	NA	NA	False	AAAAAG	-13	NA	129895595	129882587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_37176.known	chr11	+	3727	18	FSM	ENSG00000084234.18	ENST00000263574.9	3727	18	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_14	878.360134541383	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCGTTTCACTGACTGC	10	True	NA	36	True	AATAAA	-21	NA	130069905	130144811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_37184.known	chr11	+	3697	17	FSM	ENSG00000084234.18	ENST00000338167.10	3697	17	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_7	579.067188324248	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	-2	True	NA	30	True	AATAAA	-15	NA	130069893	130144805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_37187.nic	chr11	+	3638	17	NIC	ENSG00000084234.18	novel	3727	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	510	junction_13	848.590354554982	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	NA	False	NA	30	True	AATAAA	-15	NA	130069820	130144805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_37190.known	chr11	+	3687	17	FSM	ENSG00000084234.18	ENST00000278756.7	3687	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	853.475166232152	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGAGACTGCTCGTTTCAC	143	False	NA	29	True	AATAAA	-14	NA	130070567	130144804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070748_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_3720.nnic	chr1	-	2519	12	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	33.4883722264933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGACAAGAGTGTAACTA	-28	True	NA	-24	True	AATAAA	-6	NA	16644714	16618272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16643027_16643146_16644645
transcript_37202.known	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_6	457.491546977161	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	-2	True	NA	21	True	AATAAA	-28	NA	130069893	130143806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_37227.known	chr11	+	1862	13	FSM	ENSG00000084234.18	ENST00000345598.9	1862	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	843.491203108973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTATTGCAGATATTT	20	False	NA	23	True	TATAAA	-16	NA	130069915	130143679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_37244.nic	chr11	+	786	5	ISM	ENSG00000084234.18	ENST00000528499.5	2530	16	-73	22080	-16	0	5prime_fragment	FALSE	canonical	3	2389	junction_3	279.011088489329	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTGTCAAAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	130069820	130121726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613
transcript_37252.known	chr11	+	3305	19	FSM	ENSG00000149418.11	ENST00000278742.6	3305	19	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	21.6278855207523	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTTTCTTTTCCTACT	-3	True	NA	27	True	AGTAAA	-19	NA	130159781	130210362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130160061_130188113_130188274_130188529_130188658_130188868_130188940_130189738_130189897_130190112_130190149_130190453_130190695_130194148_130194289_130194639_130194738_130196338_130196449_130196569_130196701_130197840_130197946_130198307_130198419_130198507_130198622_130198946_130199070_130199950_130200138_130208409_130208685_130209441_130209579_130209661
transcript_37279.known	chr11	-	9755	6	FSM	ENSG00000196323.14	ENST00000527478.6	9755	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	14.2884568795934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTGTTGTTATTTA	-15	True	NA	-15	True	AATAAA	-2	NA	130314908	130226676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130234274_130236792_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
transcript_37280.known	chr11	-	9315	6	FSM	ENSG00000196323.14	ENST00000525842.5	9315	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	9.68297474952816	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTGCTGTTGTTATTT	252	False	NA	-16	True	AATAAA	-1	NA	130314686	130226677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130234274_130237009_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
transcript_37293.known	chr11	-	3628	9	FSM	ENSG00000134917.10	ENST00000257359.7	3628	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	13.4623317073975	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGGTCTGGTCTGATT	0	True	NA	-3	True	ACTAAA	-18	NA	130428609	130404922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130406129_130408463_130408640_130408767_130408941_130411416_130411601_130414530_130414833_130416162_130416331_130416939_130417076_130419052_130419293_130427566
transcript_37309.nic	chr11	-	1923	5	ISM	ENSG00000134917.10	ENST00000257359.7	3628	9	217	9357	217	-9355	5prime_fragment	FALSE	canonical	3	55	junction_2	8.07387763097757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACTCACGCTTGTAGT	332	False	NA	-6	True	AATAAA	-15	NA	130428392	130414279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_130414833_130416162_130416331_130416939_130417076_130419052_130419293_130427566
transcript_3731.nnic	chr1	-	3318	11	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-7	0	intron_retention	FALSE	canonical	3	16	junction_10	37.582442709329	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-7	True	NA	-7	True	AATAAA	-23	NA	16644693	16618255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16644645
transcript_37312.known	chr11	+	6006	8	FSM	ENSG00000166106.4	ENST00000299164.4	6006	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	1.45686271816937	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCTCTGTGACTGC	1	True	NA	11	True	AATAAA	-22	NA	130448644	130476645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130449931_130461488_130461622_130462086_130462255_130462496_130462781_130469261_130469440_130470919_130471102_130471207_130471384_130473046
transcript_37316.known	chr11	-	15691	11	FSM	ENSG00000120451.11	ENST00000265909.9	15691	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	9.02274902676562	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTCCTAAATTGATT	-8	True	NA	-10	True	AGTAAA	-17	NA	130916479	130866249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130907952_130908084_130910017_130910138_130910269_130910371_130911632_130911772_130914265
transcript_37317.known	chr11	-	1506	11	FSM	ENSG00000120451.11	ENST00000528555.5	1506	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	31.8654985838916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTAGAGTTACTCGGC	20	True	NA	NA	False	NA	NA	NA	130916451	130878392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130907952_130908084_130910017_130910138_130910269_130910371_130911632_130911772_130916279
transcript_37325.known	chr11	+	584	2	FSM	ENSG00000231698.3	ENST00000416553.2	998	2	62	352	-24	-352	multi-exon	FALSE	canonical	3	175	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	15	False	NA	14	True	NA	NA	NA	131253421	131300771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_131253592_131300357
transcript_37333.known	chr11	+	2583	7	FSM	ENSG00000182667.15	ENST00000427481.6	2583	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	5.20949986936259	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	NA	False	NA	8	True	ATTAAA	-22	NA	132146274	132336821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132330152_132330186_132335045
transcript_37341.known	chr11	-	17159	20	FSM	ENSG00000080854.16	ENST00000533871.8	17159	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	3.62126682353044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTAATTTTTTT	16	True	NA	-11	True	AATAAA	-15	NA	133956968	133896437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_133909278_133911885_133912008_133919741_133921398_133922176_133922223_133922568_133922731_133924819_133924905_133925738_133925966_133926915_133927092_133929670_133929783_133930983_133931135_133931452_133931570_133931654_133931796_133932070_133932214_133935616_133935763_133936052_133936195_133937375_133937494_133937809_133937962_133944219_133944367_133946060_133946259_133956690
transcript_37344.nnic	chr11	-	2741	8	NNC	ENSG00000080854.16	novel	618	4	NA	NA	-34	3424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.3908463611752	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTACCATACAAAAGTAGG	-18	True	NA	NA	False	CATAAA	-35	NA	133957002	133933982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_133935505_133935616_133935763_133936052_133936195_133937375_133937494_133937805_133937962_133944219_133944367_133946060_133946259_133956690
transcript_37345.nnic	chr11	-	2853	7	NNC	ENSG00000080854.16	novel	4050	19	NA	NA	-34	3424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.85626742811116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTACCATACAAAAGTAGG	-18	True	NA	NA	False	CATAAA	-35	NA	133957002	133933982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_133935763_133936052_133936195_133937375_133937494_133937805_133937962_133944219_133944367_133946060_133946259_133956690
transcript_37349.known	chr11	+	3765	9	FSM	ENSG00000166086.13	ENST00000299106.9	3765	9	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_8	17.6560011044404	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAACGCACATCATCA	2	True	NA	NA	False	NA	NA	NA	134069071	134152001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134069160_134139850_134139917_134140656_134140771_134144240_134144394_134144791_134144995_134145945_134146046_134148546_134148677_134148763_134148819_134149145
transcript_37352.known	chr11	+	1558	7	FSM	ENSG00000151502.11	ENST00000525095.2	1558	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.3375504992845	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTTTCTCTGGAGAA	8	True	NA	20	True	AAAACA	-18	NA	134224676	134245729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134224762_134224799_134225346_134234896_134235054_134239990_134240156_134243118_134243295_134244937_134245081_134245443
transcript_37353.known	chr11	+	3661	6	FSM	ENSG00000151502.11	ENST00000281187.10	3661	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	4.96386945839634	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTTCTGTGGTCTCTTC	2	True	NA	28	True	ATTAAA	-42	NA	134224670	134247788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134225346_134234896_134235054_134239990_134240156_134243118_134243295_134244937_134245081_134245443
transcript_37363.known	chr11	-	893	8	FSM	ENSG00000151500.15	ENST00000392595.6	893	8	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_1	313.602504154933	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	1478	False	NA	-18	True	AATAAA	-18	NA	134253248	134248278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_37364.known	chr11	-	943	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_7	523.318804772551	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-29	True	NA	-18	True	AATAAA	-18	NA	134253370	134248278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_37371.known	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	539.303563249246	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-9	True	NA	21	True	AATAAA	-9	NA	134253350	134248287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_37372.nic	chr11	-	806	7	NIC	ENSG00000151500.15	novel	835	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	361	junction_6	686.118490738541	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-52	True	NA	21	True	AATAAA	-9	NA	134253393	134248287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_37376.known	chr11	-	926	6	FSM	ENSG00000151500.15	ENST00000531135.5	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	1204	junction_5	266.742872444607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGTGGCCCCTTAAA	-12	True	NA	NA	False	NA	NA	NA	134253353	134248881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_37378.known	chr11	-	1304	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_1	297.467458537718	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTTCTTCTAAAACCA	-11	True	NA	-21	True	AATAAA	-15	NA	134253352	134248281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_37379.known	chr11	-	1074	5	FSM	ENSG00000151500.15	ENST00000533975.1	1074	5	0	0	0	0	multi-exon	FALSE	canonical	3	1705	junction_3	97.4509492000976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGGGCGGTTAAAAA	-7	True	NA	NA	False	NA	NA	NA	134253348	134249038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_37394.known	chr11	+	2176	11	FSM	ENSG00000151498.12	ENST00000281182.9	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_10	38.4088531461172	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	6	True	NA	39	True	AATAAA	-28	NA	134253567	134265855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_3740.nnic	chr1	-	2402	11	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	41.0165820126446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGACAAGAGTGTAACTA	-29	True	NA	-24	True	AATAAA	-6	NA	16644715	16618272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16644645
transcript_37412.nic	chr11	+	2046	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	123.226079490774	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	NA	False	NA	39	True	AATAAA	-28	NA	134253527	134265855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_37413.known	chr11	+	1336	10	FSM	ENSG00000151498.12	ENST00000526026.5	1336	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	169.654623744903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATCCAAGAACAGTGATG	-14	True	NA	NA	False	GGGGCT	-33	NA	134253547	134262958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134253710_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134262769
transcript_37426.known	chr11	+	1797	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	142.810420931144	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	-1	True	NA	34	True	AATAAA	-23	NA	134253560	134265850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_37430.known	chr11	+	703	7	FSM	ENSG00000151498.12	ENST00000524547.5	703	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	154.251598226908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCTTGCAGATGCACG	55	False	NA	NA	False	NA	NA	NA	134253616	134262527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519
transcript_37437.nnic	chr11	+	3609	20	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-700	0	at_least_one_novel_splicesite	TRUE	canonical	1	26	junction_11	41.0286704702214	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	18	False	NA	13	True	AATAAA	-16	NA	134275678	134319563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292178_134293144_134293210_134307123_134307209_134309625_134309764_134310570_134310652_134311063_134311171_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_37438.known	chr11	+	2946	20	FSM	ENSG00000166105.16	ENST00000431683.7	2946	20	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_11	39.2496096280674	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	9	True	NA	14	True	AATAAA	-17	NA	134276378	134319564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134307123_134307209_134309625_134309764_134310570_134310652_134311063_134311171_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_37463.nnic	chr11	+	3198	16	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-700	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_9	37.8816871617702	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	18	False	NA	13	True	AATAAA	-16	NA	134275678	134319563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292178_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_37464.nic	chr11	+	3234	16	NIC	ENSG00000166105.16	novel	2946	20	NA	NA	-700	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	34.5706362233744	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	18	False	NA	13	True	AATAAA	-16	NA	134275678	134319563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_37469.nnic	chr11	+	3696	15	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-636	0	intron_retention	FALSE	canonical	3	46	junction_8	37.9011200092977	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	-1	True	NA	13	True	AATAAA	-16	NA	134275742	134319563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292178_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_37470.nic	chr11	+	2698	15	NIC	ENSG00000166105.16	novel	2946	20	NA	NA	398	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	34.1246215498189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	407	False	NA	13	True	AATAAA	-16	NA	134276776	134319563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_37483.nnic	chr11	+	2742	11	NIC	ENSG00000166105.16	novel	2946	20	NA	NA	-700	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	47.9529978207828	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	18	False	NA	13	True	AATAAA	-16	NA	134275678	134319563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134318630_134318748_134318876
transcript_37490.nnic	chr11	+	2154	10	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	414	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	52.8928569939992	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	423	False	NA	13	True	AATAAA	-16	NA	134276792	134319563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292178_134293144_134293210_134318630_134318748_134318876
transcript_37500.nnic	chr11	+	3175	20	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	20.2595348777459	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	NA	False	NA	20	True	AGTAAA	-20	NA	134331860	134376324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375745_134375947
transcript_37503.nnic	chr11	+	3167	20	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	20.2595348777459	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	NA	False	NA	20	True	AGTAAA	-20	NA	134331860	134376324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375786_134375996
transcript_37506.known	chr11	+	3152	20	FSM	ENSG00000149328.15	ENST00000339772.9	3152	20	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_19	20.2595348777459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCCCTCTGGTGATAGT	NA	False	NA	17	True	AGTAAA	-17	NA	134331873	134376321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375885_134376094
transcript_37509.known	chr11	+	3251	19	FSM	ENSG00000149328.15	ENST00000535456.7	3251	19	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_10	17.1276975887408	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	-9	True	NA	20	True	AGTAAA	-20	NA	134331987	134376324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971
transcript_37517.known	chr11	-	3522	7	FSM	ENSG00000109956.13	ENST00000392580.5	3522	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.13437474581095	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCTTCAGCCCTGCCT	709	False	NA	-10	True	ATTAAA	-27	NA	134411918	134378505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134380748_134381923_134382025_134382709_134383007_134383679_134384189_134387547_134387695_134387826_134387941_134411806
transcript_37520.known	chr11	-	3976	6	FSM	ENSG00000109956.13	ENST00000312527.9	3976	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.93907194296653	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATCCTCTTCAGCCCTGC	0	True	NA	-12	True	ATTAAA	-25	NA	134412242	134378507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134380748_134381923_134382025_134382709_134383007_134383679_134384189_134387547_134387941_134411806
transcript_37521.known	chr11	+	864	3	FSM	ENSG00000255545.8	ENST00000657630.1	864	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGAGTGAAACGCGCA	3173	False	NA	NA	False	ATTAAA	-16	NA	134412283	134439007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134412339_134436482_134436785_134438500
transcript_3753.nic	chr1	+	2147	9	NIC	ENSG00000186301.8	novel	2291	18	NA	NA	1770	58	intron_retention	FALSE	canonical	0	0	junction_1	7.31009575860672	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGACTTTCTTAAATGA	1789	False	NA	10	True	AATAAA	-22	NA	16647391	16650347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_16648402_16648431_16648665_16648755_16648793_16648880_16649002_16649173_16649252_16649378_16649526_16649606_16649714_16649809_16649950_16650073
transcript_37530.nnic	chr12	-	1792	11	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	608	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_6	84.3300658128523	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	3	True	NA	NA	False	AATAAA	-12	NA	31407	14521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17642_17860_18036_18184_18372_18472_26800_26955_31374
transcript_37531.nnic	chr12	-	1977	11	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	130	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	79.8270630801359	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	31885	14521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_26800_26955_31587
transcript_37540.nnic	chr12	-	2087	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_9	76.8362054576864	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	31936	14521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_31374
transcript_37541.nnic	chr12	-	1799	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.3631187336572	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	31861	14521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_31587
transcript_37543.nnic	chr12	-	1962	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	597	0	intron_retention	FALSE	canonical	3	133	junction_1	61.0824175061454	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	-8	True	NA	NA	False	AATAAA	-12	NA	31418	14521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17860_18036_18184_18372_18472_26800_26955_31374
transcript_37555.nnic	chr12	-	2374	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	602	0	intron_retention	FALSE	canonical	3	96	junction_5	69.6213746091611	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	-3	True	NA	NA	False	AATAAA	-12	NA	31413	14521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14945_15084_15154_15912_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_26800_26955_31374
transcript_37575.nnic	chr12	-	2613	9	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	602	0	intron_retention	FALSE	canonical	3	133	junction_1	61.3890004398182	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	-3	True	NA	NA	False	AATAAA	-12	NA	31413	14521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14945_15084_15154_15912_16881_16968_17171_17347_17860_18036_18184_18372_18472_26800_26955_31374
transcript_37613.nnic	chr12	-	2164	3	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	130	-6012	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	142.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGCCTTGATTCGA	NA	False	NA	NA	False	TTTAAA	-3	NA	31885	20533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_22033_26800_26955_31374
transcript_37614.nnic	chr12	-	1626	3	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	608	-6072	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	142.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTCCCTGTAAATT	3	True	NA	NA	False	TTTAAA	-19	NA	31407	20593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_22033_26800_26955_31374
transcript_37616.known	chr12	+	7087	14	FSM	ENSG00000120645.12	ENST00000538872.6	7087	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.61312119253277	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTGTCGGCGCAGC	-13	True	NA	29	True	NA	NA	NA	66766	178455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67437_99145_99215_125632_125913_138266_139355_141123_141286_157024_157148_157527_157695_161925_162066_163493_163620_165433_165534_165728_165891_169012_169106_171111_171162_174598
transcript_37619.known	chr12	-	10701	28	FSM	ENSG00000073614.13	ENST00000399788.7	10701	28	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_20	11.8836379312107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGTTCCATGAAATTT	-33	True	NA	63	True	AAGAAA	-19	NA	389320	280056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_285663_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
transcript_37624.nic	chr12	-	3768	22	ISM	ENSG00000073614.13	ENST00000399788.7	10701	28	-249	29834	-249	0	5prime_fragment	FALSE	canonical	3	40	junction_14	10.7728557851996	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAGAAAAGG	-14	True	NA	NA	False	AGTAAA	-10	NA	389569	309890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
transcript_37626.known	chr12	+	2300	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	32.9882133833013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-6	True	NA	15	True	AATAAA	-16	NA	401643	442642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_37627.known	chr12	+	2253	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	26.9084766514658	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-13	True	NA	15	True	AATAAA	-16	NA	401636	442642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_37638.known	chr12	+	5493	20	FSM	ENSG00000139044.12	ENST00000266383.10	5493	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	24.0764019362094	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGTCTTTTCCTGTT	-19	True	NA	NA	False	ATTAAA	-28	NA	459938	563509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466_552529_553193_553984_556546_556867_557607_557762_558015_558089_558507_558662_559294_559422_561342
transcript_37649.nic	chr12	+	2773	7	ISM	ENSG00000060237.19	ENST00000535572.5	9886	26	-57	50165	-43	0	5prime_fragment	FALSE	canonical	3	24	junction_1	9.79370546150264	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGGAAGAGAGCAG	NA	False	NA	NA	False	AAGAAA	-3	NA	752535	861135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012
transcript_37653.nic	chr12	+	2563	6	ISM	ENSG00000060237.19	ENST00000535572.5	9886	26	-57	51923	-43	-1758	5prime_fragment	FALSE	canonical	3	24	junction_1	9.13016976841066	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGGGAAAATACAAAGA	NA	False	NA	NA	False	CATAAA	-32	NA	752535	859377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244
transcript_37654.nic	chr12	+	2422	5	ISM	ENSG00000060237.19	ENST00000535572.5	9886	26	-57	54059	-43	-3894	5prime_fragment	FALSE	canonical	3	24	junction_1	10.2072278312968	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAAGGTAAGTTGCCTC	NA	False	NA	NA	False	AAAACA	-3	NA	752535	857241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160
transcript_37656.nic	chr12	+	1906	2	ISM	ENSG00000060237.19	ENST00000447667.2	1902	3	-520	13743	-43	-13743	5prime_fragment	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGAAGTGCATTGTTTT	NA	False	NA	NA	False	AGTAAA	-2	NA	752535	813758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_754325_813641
transcript_37662.known	chr12	+	9308	19	FSM	ENSG00000082805.21	ENST00000360905.9	9308	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	24.5814343271553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTGTCCTTCTTTGAG	-6	True	NA	15	True	TATAAA	-15	NA	991222	1495931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
transcript_37666.known	chr12	+	9241	18	FSM	ENSG00000082805.21	ENST00000543086.7	9241	18	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	27.5221207036755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCCTTCTTTGAGTG	-21	True	NA	17	True	TATAAA	-17	NA	991207	1495933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
transcript_37674.nic	chr12	+	2369	10	ISM	ENSG00000082805.21	ENST00000397203.7	7033	19	-48	311542	-8	-31	5prime_fragment	FALSE	canonical	3	48	junction_1	23.046383717823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCAAGAGGAAATTGATA	647	False	NA	4	True	NA	NA	NA	991199	1181974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_991488_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924
transcript_37682.nic	chr12	+	1699	5	ISM	ENSG00000082805.21	ENST00000692909.1	2452	7	-53	31910	-8	-5748	5prime_fragment	FALSE	canonical	3	48	junction_1	25.6063956854533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAGAAGAAATGAAGCAA	647	False	NA	14	True	NA	NA	NA	991199	1110285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_991488_1027747_1028573_1083163_1083581_1104749_1104825_1110191
transcript_37689.known	chr12	+	2238	5	FSM	ENSG00000111186.13	ENST00000397196.7	2238	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.87082869338697	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGCTCCCTTTCCTTA	9	True	NA	4	True	ATTAAA	-14	NA	1629230	1647212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_1629372_1631297_1631435_1632657_1632906_1639683_1639977_1645793
transcript_37690.nnic	chr12	+	1643	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-73	-2423	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	14.2427926635594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACCTCAAAGGATGGAG	NA	False	NA	-3	True	AATAAA	-1	NA	1690996	1786251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_37691.nnic	chr12	+	4066	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	14.2427926635594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	1690996	1788674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_37692.known	chr12	+	3971	8	FSM	ENSG00000006831.10	ENST00000357103.5	3971	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	19.0316599810067	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	21	True	NA	NA	False	AATAAA	-16	NA	1691069	1788674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_1691192_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_37704.known	chr12	+	1452	3	FSM	ENSG00000151067.23	ENST00000673589.2	1452	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGGATGCCTCTGCAA	-4	True	NA	NA	False	NA	NA	NA	2053284	2121127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2053612_2115223_2115546_2120324
transcript_37709.known	chr12	-	2073	10	FSM	ENSG00000151065.14	ENST00000543381.5	2073	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	81.3557953196867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCATGTTGAGTGTT	-16	True	NA	-102	True	TTTAAA	-38	NA	2004470	1946151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1991120_1991247_1993263_1993392_1997934_1997976_2004281
transcript_3771.nnic	chr1	-	504	4	NNC	ENSG00000283773.1	novel	166	2	NA	NA	-1565	7736	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	12.9185482500507	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	12	True	NA	NA	False	AAAAAG	-20	NA	16644674	16635030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16635169_16642766_16642851_16643027_16643146_16644510
transcript_37711.known	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	27.0774352552083	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-3	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_37716.known	chr12	-	2231	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTTGTATTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	2004535	1991455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1993392_1997934_1997976_2004281
transcript_3772.nic	chr1	-	413	4	ISM	ENSG00000215908.10	ENST00000639456.1	2575	13	-32	16758	-32	-5361	5prime_fragment	FALSE	canonical	3	47	junction_1	6.59966329107444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-32	True	NA	NA	False	AAAAAG	-20	NA	16644718	16635030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_16635169_16642766_16642851_16643027_16643146_16644645
transcript_37732.known	chr12	+	2320	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_11	14.9743582486422	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	-5	True	NA	18	True	AATAAA	-24	NA	2812667	2825076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_37744.known	chr12	+	1951	12	FSM	ENSG00000078246.17	ENST00000397132.6	1951	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	47.2622365982024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTGTCACTGCC	20	False	NA	4	True	AATAAA	-11	NA	2890906	2941130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310_2939425_2940529
transcript_37749.known	chr12	+	3080	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	23.8067217398784	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	4	True	NA	12	True	AATAAA	-19	NA	2890890	2941138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
transcript_37754.known	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1212	junction_3	53.5864364633394	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	-30	True	NA	16	True	ATTAAA	-29	NA	2794969	2805423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
transcript_37759.known	chr12	-	3475	10	FSM	ENSG00000111206.13	ENST00000342628.6	3475	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	157.470828182223	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCTCTGTGGTTTAT	167	False	NA	-8	True	AATAAA	-15	NA	2876986	2857682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2861298_2861413_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_37764.known	chr12	+	1419	9	FSM	ENSG00000111203.13	ENST00000537851.5	1419	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	37.6264534602984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACAGAGACTTGTT	12	True	NA	NA	False	NA	NA	NA	2812684	2824502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2812857_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_37767.known	chr12	-	3552	9	FSM	ENSG00000111206.13	ENST00000359843.8	3552	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	138.246835406819	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCTGTGGTTTATTGG	-21	True	NA	-5	True	AATAAA	-18	NA	2877174	2857679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_37774.known	chr12	-	3487	8	FSM	ENSG00000111206.13	ENST00000627656.2	3487	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	135.253201704908	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTGTGGTTTATTG	-2	True	NA	-6	True	AATAAA	-17	NA	2877155	2857680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864756_2866392_2866522_2868562_2868755_2872095_2872245_2873976_2874526_2876919
transcript_37775.known	chr12	-	3370	8	FSM	ENSG00000111206.13	ENST00000361953.7	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	68.6062411631086	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCTCTGTGGTTTAT	26	True	NA	-8	True	AATAAA	-15	NA	2877040	2857682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_37793.known	chr12	+	587	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAATTGCTGCCCTCCT	88	False	NA	NA	False	AATAAA	-4	NA	2812760	2818458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
transcript_37796.known	chr12	+	1655	3	FSM	ENSG00000171792.11	ENST00000461997.5	1655	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	162.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGACATAGATGAGTTCT	-26	True	NA	-17	True	NA	NA	NA	2877198	2889271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2885282_2885493_2887910
transcript_37798.known	chr12	+	1926	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	19	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGGACCTACTGTGT	-2	True	NA	9	True	ATTAAA	-20	NA	2877222	2889524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2885282_2885535_2887910
transcript_37801.known	chr12	+	580	3	FSM	ENSG00000171792.11	ENST00000538700.2	580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	201.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGGGATCCCCTTAAT	-2	True	NA	NA	False	NA	NA	NA	2877222	2888057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2885161_2885535_2887910
transcript_37802.known	chr12	+	583	3	FSM	ENSG00000171792.11	ENST00000538636.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	199.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCCCAAAGCTGTGGGA	-26	True	NA	NA	False	NA	NA	NA	2877198	2888137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2885262_2885535_2887910
transcript_37803.known	chr12	+	1605	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	-17	True	NA	-5	True	NA	NA	NA	2877207	2889440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2887910
transcript_37811.known	chr12	+	1710	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	28.2999803690548	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGCTGTGTGAGC	-8	True	NA	23	True	AATAAA	-28	NA	2959396	3040676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_37813.nic	chr12	+	2065	13	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	73.4194097103908	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	1	True	NA	12	True	AATAAA	-17	NA	2959343	3040665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_2959482_2959947_2960354_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_37816.known	chr12	+	1637	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	75.1634032630418	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	15	False	NA	12	True	AATAAA	-17	NA	2959329	3040665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_37818.nic	chr12	+	1523	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	79.5412466419491	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	3	True	NA	12	True	AATAAA	-17	NA	2959317	3040665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_2959482_2959947_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_37820.nnic	chr12	+	1696	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	71.1938338865879	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	-8	True	NA	12	True	AATAAA	-17	NA	2959306	3040665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_37832.known	chr12	+	1396	11	FSM	ENSG00000197905.10	ENST00000397122.6	1396	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	82.4706614499969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTGGTCTGGCTGTG	4	True	NA	18	True	AATAAA	-23	NA	2959916	3040671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_37839.known	chr12	+	4322	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.67890834580027	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	-6	True	NA	21	True	AATAAA	-23	NA	3077378	3286559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_37843.known	chr12	+	4284	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	12.6700675706524	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTCTCTCAGTGGTGTG	NA	False	NA	26	True	AATAAA	-28	NA	3077354	3286564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_37845.known	chr12	+	584	2	FSM	ENSG00000011105.14	ENST00000539631.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGCTGATGGTTTGTTC	6	True	NA	NA	False	NA	NA	NA	3077427	3084210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3077454_3083652
transcript_37846.known	chr12	-	255	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	31	False	NA	NA	False	NA	NA	NA	3211917	3211662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_3211700_3211900
transcript_37849.known	chr12	+	2399	10	FSM	ENSG00000111218.12	ENST00000382622.4	2399	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.89215404065849	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGGATGGCTGGTTCC	-13	True	NA	NA	False	AATAAA	-17	NA	3491202	3593973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3491701_3540605_3540792_3549935_3550092_3553650_3553715_3568705_3568849_3569476_3569565_3576870_3576987_3583057_3583209_3592230_3592353_3593098
transcript_37854.known	chr12	+	6849	6	FSM	ENSG00000118971.9	ENST00000676411.1	6849	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	333.830495910724	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	9	False	NA	18	True	AATAAA	-14	NA	4269770	4305350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4270369_4274000_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_37856.known	chr12	+	6493	5	FSM	ENSG00000118971.9	ENST00000261254.8	6493	5	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_3	26.3106442338457	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGGCCGTTTTTGACT	1	True	NA	21	True	AATAAA	-17	NA	4273761	4305353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_37863.known	chr12	-	621	2	FSM	ENSG00000255920.4	ENST00000663068.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTATTTATTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	4276252	4248766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_4249194_4276058
transcript_37864.known	chr12	-	1374	2	FSM	ENSG00000255920.4	ENST00000656828.1	1374	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACACATATGTCCACAGT	0	True	NA	NA	False	NA	NA	NA	4275456	4247980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_4249194_4275295
transcript_37865.known	chr12	+	8209	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	9.86711710683521	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	-22	True	NA	NA	False	ATTAAA	-19	NA	4321212	4360028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
transcript_37868.known	chr12	-	3817	14	FSM	ENSG00000047621.12	ENST00000261250.8	3817	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	7.75054874942154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACATCTGTTTACATGG	8	True	NA	NA	False	AATAAA	-17	NA	4538469	4487734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536220_4538408
transcript_37871.known	chr12	-	2168	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	13.5964666485614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-31	True	NA	NA	False	ATTAAA	-14	NA	4538508	4489414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
transcript_37872.known	chr12	+	2112	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_7	58.3501017565522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	14	True	NA	31	True	ATTAAA	-16	NA	4538889	4560047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_37877.nic	chr12	+	750	7	ISM	ENSG00000111247.15	ENST00000544927.5	787	8	-127	5931	5	0	5prime_fragment	FALSE	canonical	3	345	junction_3	48.1386885294285	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTATGAGAAAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	4538802	4553039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982
transcript_3788.known	chr1	-	3184	8	FSM	ENSG00000186715.11	ENST00000455405.6	3184	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.06858356939597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTTCTTGTTTGGATG	NA	False	NA	NA	False	AATAAA	-15	NA	16758872	16754909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16757394_16757517_16757658_16757753_16757861_16757941_16758089_16758215_16758294_16758465_16758587_16758674_16758712_16758802
transcript_37885.known	chr12	+	3317	15	FSM	ENSG00000255639.3	ENST00000648836.1	3317	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	408.187538181325	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTTATACATAAGGCAAA	-23	True	NA	NA	False	ATTAAA	-45	NA	4649100	4774184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4772444
transcript_37890.known	chr12	+	8356	11	FSM	ENSG00000139180.11	ENST00000266544.10	8356	11	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_5	46.3237520069348	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTGAGAGCTGCAATT	-10	True	NA	NA	False	AATAAA	-28	NA	4649113	4694317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4686937
transcript_37897.known	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	14.8996644257513	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	-32	True	NA	25	True	CATAAA	-20	NA	4604896	4613873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
transcript_37898.known	chr12	+	2910	1	FSM	ENSG00000130037.5	ENST00000252321.5	2910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGTTTTTCTGCAGCT	0	True	NA	NA	False	AATAAA	-21	NA	5043878	5046788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_5043900_5046800
transcript_37899.known	chr12	+	1341	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTCAGAGTTGTGTA	-3	True	NA	NA	False	AGTAAA	-14	NA	5432107	5495299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_5432343_5494193
transcript_37902.known	chr12	-	3683	25	FSM	ENSG00000047617.17	ENST00000682330.1	3683	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	5.12195031213697	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATCTGTTGTCTTTGG	-1	True	NA	NA	False	AATAAA	-25	NA	5945259	5562654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_5563569_5565557_5565664_5575833_5576016_5577954_5578008_5578365_5578519_5599483_5599630_5612655_5612757_5612900_5612959_5615185_5615298_5635151_5635348_5647726_5647802_5732519_5732631_5739316_5739400_5744156_5744318_5750835_5750971_5799506_5799572_5806051_5806094_5807312_5807369_5827768_5827821_5830434_5830490_5832451_5832604_5854042_5854142_5921039_5921367_5922619_5922805_5945195
transcript_37908.known	chr12	-	8830	52	FSM	ENSG00000110799.14	ENST00000261405.10	8830	52	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_43	102.706780761069	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGGTGCACTGTGTC	-1	True	NA	-4	True	AATAAA	-24	NA	6124670	5948876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_5949204_5949785_5949884_5951843_5951884_5952390_5952520_5953495_5953595_5967485_5967603_5968126_5968168_5969210_5969392_5971598_5971710_5976110_5976261_5981785_5981992_5983149_5983255_5985044_5985120_5985562_5985666_5991818_5992019_5993861_5994204_5994414_5994608_5996001_5996223_6011616_6011795_6012086_6012131_6013480_6013646_6016088_6016233_6016515_6016657_6016753_6016871_6018364_6019744_6021899_6022036_6022739_6022899_6023630_6023788_6025579_6025694_6025905_6026047_6029341_6029489_6031443_6031579_6034687_6034827_6036387_6036492_6044290_6044452_6046722_6046818_6052542_6052784_6056856_6057073_6057848_6058045_6062953_6063055_6064245_6064385_6065136_6065274_6071296_6071344_6072330_6072443_6073618_6073742_6075334_6075552_6095459_6095585_6110373_6110583_6110865_6110969_6121173_6121339_6123141_6123197_6124420
transcript_37911.known	chr12	+	1225	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	109.438082391602	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTTGTTTTGTTTAA	19	True	NA	20	True	AATAAA	-22	NA	6200399	6238266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_37913.known	chr12	+	1272	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	498.691839737135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	4	True	NA	1	True	AATAAA	-3	NA	6199840	6238247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_37915.known	chr12	+	2881	16	FSM	ENSG00000008323.16	ENST00000011684.11	2881	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	29.2015220303478	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGTGTGGTGGTGTGC	143	False	NA	12	True	AATATA	-39	NA	6310435	6328505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6310516_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
transcript_37918.known	chr12	+	2969	16	FSM	ENSG00000008323.16	ENST00000684764.1	2969	16	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	14.2875236949351	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGTGGTGGTGTGCC	-8	True	NA	13	True	AATATA	-40	NA	6310681	6328506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
transcript_37927.known	chr12	+	1683	12	FSM	ENSG00000008323.16	ENST00000536531.5	1683	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	13.8528273809458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTCTCCTCCATCCAGA	12	True	NA	NA	False	AATAAA	-16	NA	6310737	6318973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744
transcript_3793.known	chr1	-	527	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	4	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	166	False	NA	-5	True	AATAAA	-27	NA	16889501	16888541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16888783_16889215
transcript_37931.nic	chr12	+	1310	3	ISM	ENSG00000008323.16	ENST00000536531.5	1683	12	-94	4446	-38	2004	5prime_fragment	FALSE	canonical	3	111	junction_2	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAAAATGTAAGCCATG	351	False	NA	NA	False	AAAAAG	-4	NA	6310643	6314527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_6310849_6312158_6312365_6313628
transcript_37932.known	chr12	+	404	2	FSM	ENSG00000008323.16	ENST00000538208.1	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGGCTCCAGGGATAT	84	False	NA	NA	False	NA	NA	NA	6310809	6312523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6310849_6312158
transcript_3794.known	chr1	-	346	2	FSM	ENSG00000238142.3	ENST00000457075.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	18	True	NA	-5	True	AATAAA	-27	NA	16889649	16888541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16888786_16889547
transcript_37945.known	chr12	-	2171	10	FSM	ENSG00000067182.8	ENST00000162749.7	2171	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	12.9710027977889	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCTCTTGGAGACAGT	16	True	NA	-13	True	ACTAAA	-15	NA	6342076	6328770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6330852_6330927_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_3795.known	chr1	-	1048	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	78	False	NA	-5	True	AATAAA	-27	NA	16889589	16888541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16888500_16889600
transcript_37950.nic	chr12	-	2131	9	NIC	ENSG00000067182.8	novel	2171	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	47.6233595517998	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCTCTTGGAGACAGT	-18	True	NA	-13	True	ACTAAA	-15	NA	6342110	6328770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_37956.known	chr12	-	2069	9	FSM	ENSG00000067182.8	ENST00000534885.5	2069	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	51.6839856725466	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGGTCTGTCGGGATG	-22	True	NA	1	True	ACTAAA	-29	NA	6342114	6328756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6330852_6330927_6333068_6333148_6333366_6333517_6333736_6333866_6341775
transcript_37966.nic	chr12	-	3554	13	NIC	ENSG00000111319.13	novel	3149	13	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	74.7021400109945	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	8505	False	NA	-2	True	AATAAA	-16	NA	6375491	6346846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375027
transcript_37967.nic	chr12	-	3244	13	NIC	ENSG00000111319.13	novel	3149	13	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	73.9243231660294	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	8490	False	NA	-2	True	AATAAA	-16	NA	6375506	6346846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375352
transcript_37968.known	chr12	-	3149	13	FSM	ENSG00000111319.13	ENST00000228916.7	3149	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	70.310027734314	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	0	True	NA	-2	True	AATAAA	-16	NA	6375563	6346846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375504
transcript_37971.known	chr12	-	3481	12	FSM	ENSG00000111319.13	ENST00000360168.7	3481	12	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_9	26.8872761698672	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGAGCTGGATGGG	-1	True	NA	2	True	AATAAA	-20	NA	6375224	6346842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367
transcript_37975.known	chr12	-	2203	11	FSM	ENSG00000111319.13	ENST00000338748.9	2203	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	89.7398462222886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACACGCAGGCATGCACG	9193	False	NA	NA	False	AAGAAA	-32	NA	6374803	6347508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6363442_6363711_6374367
transcript_37977.known	chr12	-	2336	11	FSM	ENSG00000111319.13	ENST00000396966.6	2336	11	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	84.2926449934987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACACGCAGGCATGCACG	9193	False	NA	NA	False	AAGAAA	-32	NA	6374803	6347508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367
transcript_37978.known	chr12	+	2134	10	FSM	ENSG00000111321.11	ENST00000228918.9	2134	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	2.39340658094867	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTTATTTTCTTGGGA	-35	True	NA	6	True	AATAAA	-15	NA	6384161	6391566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6384455_6384587_6384685_6385021_6385148_6385226_6385380_6386065_6386163_6386346_6386445_6388397_6388506_6388799_6388826_6390111_6390341_6390659
transcript_37993.known	chr12	-	1068	5	FSM	ENSG00000139190.17	ENST00000400911.7	1068	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	17.606816861659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	285	False	NA	NA	False	ATTAAA	-1	NA	6470653	6462236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6462843_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_37994.known	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	8.05536398239638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-2	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
transcript_37996.known	chr12	+	1781	7	FSM	ENSG00000139192.12	ENST00000266556.8	1781	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.74535599249993	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTTGTTATTACT	-44	True	NA	27	True	AATACA	-37	NA	6452041	6462316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6452313_6453066_6453298_6453446_6453717_6457405_6457745_6458644_6458948_6460854_6460939_6462033
transcript_37997.known	chr12	+	4825	32	FSM	ENSG00000010292.13	ENST00000315579.10	4825	32	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_6	68.1889094158698	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTTTCCTAAGCTTG	-11	True	NA	31	True	AATAAA	-19	NA	6494101	6531955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920_6531077_6531326
transcript_38.known	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	639	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00108_+_0_1000
transcript_38007.nic	chr12	+	4907	31	ISM	ENSG00000010292.13	ENST00000315579.10	4825	32	-751	919	-5	306	5prime_fragment	TRUE	canonical	3	353	junction_6	68.1025452289903	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGTTGTCTTCTCAAG	NA	False	NA	NA	False	AAAAAG	-4	NA	6493350	6531036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920
transcript_38017.known	chr12	-	898	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	2135	junction_2	129.5	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTACTACTCTCATAA	-5	True	NA	-6	True	AATATA	-20	NA	6493262	6491885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493057
transcript_38018.known	chr12	-	343	3	FSM	ENSG00000111639.8	ENST00000540949.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1181.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCGATAGAAGAGAAAGC	527	False	NA	-102	True	AATAAA	-42	NA	6493295	6492280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493250
transcript_38019.known	chr12	-	814	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1095.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCACATACTTTTGTT	-18	True	NA	-28	True	AATAAA	-21	NA	6493840	6492146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493458
transcript_38020.known	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1197	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-19	True	NA	16	True	NA	NA	NA	6493841	6492102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493716
transcript_38022.known	chr12	+	1348	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	8060.79010938134	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	15	False	NA	19	True	AATAAA	-7	NA	6534533	6538359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_38023.known	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_1	8372.99439281078	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	11	True	NA	-25	True	NA	NA	NA	6535301	6538315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_38027.known	chr12	+	1285	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	0	0	0	0	multi-exon	FALSE	canonical	3	20749	junction_1	1451.7009635252	20372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	-2	True	NA	31	True	AATAAA	-19	NA	6534516	6538371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_38028.known	chr12	+	1256	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	3	23617	junction_4	739.137086509033	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATCAATAAAGTACCC	200	False	NA	-1	True	NA	NA	NA	6534753	6538339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_38029.known	chr12	+	1266	9	FSM	ENSG00000111640.15	ENST00000396856.5	1266	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8119.71931088138	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCAATAAAGTACCCT	13	False	NA	0	True	NA	NA	NA	6534531	6538340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536818_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_38030.known	chr12	+	1333	8	FSM	ENSG00000111640.15	ENST00000474249.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	20749	junction_1	1549.42605568669	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGGGAGCCGCACCTT	22	False	NA	-26	True	NA	NA	NA	6534540	6538314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_38031.nnic	chr12	-	2596	11	NNC	ENSG00000010295.20	novel	2680	10	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	24.5853614982575	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	NA	False	NA	-11	True	AATGAA	-12	NA	6556098	6539538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549475_6549485_6549755_6549897_6550694_6550791_6550940_6551002_6555256_6555884_6555992
transcript_38037.known	chr12	-	2680	10	FSM	ENSG00000010295.20	ENST00000356896.8	2680	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.2463988980744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-12	True	NA	-11	True	AATGAA	-12	NA	6556073	6539538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549475_6549485_6549755_6549897_6550694_6550791_6550940_6551002_6555256
transcript_38038.known	chr12	-	2786	10	FSM	ENSG00000010295.20	ENST00000487279.6	2786	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	20.7257220756131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-10	True	NA	0	True	AATGAA	-23	NA	6556071	6539527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256
transcript_38039.nnic	chr12	-	2587	10	NNC	ENSG00000010295.20	novel	2680	10	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_9	19.0787840283389	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	NA	False	NA	-11	True	AATGAA	-12	NA	6556098	6539538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256_6555884_6555992
transcript_3804.known	chr1	-	3996	29	FSM	ENSG00000159363.19	ENST00000326735.13	3996	29	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_24	73.3246467876294	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	0	True	NA	-9	True	AATAAA	-20	NA	17011928	16985957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004691_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
transcript_38045.known	chr12	-	2677	9	FSM	ENSG00000010295.20	ENST00000396840.6	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	18.2054250156375	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-10	True	NA	0	True	AATGAA	-23	NA	6556071	6539527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548158_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
transcript_38049.known	chr12	-	3001	9	FSM	ENSG00000010295.20	ENST00000488007.5	3001	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	20.9609011018133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGGATTCTTTAATAA	-10	True	NA	-49	True	NA	NA	NA	6556071	6539576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256
transcript_3805.known	chr1	-	3981	29	FSM	ENSG00000159363.19	ENST00000452699.5	3981	29	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_24	72.1542688994086	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	0	True	NA	-9	True	AATAAA	-20	NA	17011928	16985957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004706_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
transcript_38050.nnic	chr12	-	2851	9	NNC	ENSG00000010295.20	novel	2680	10	NA	NA	-25	0	intron_retention	FALSE	non_canonical	1	4	junction_8	18.7949461292125	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	NA	False	NA	-11	True	AATGAA	-12	NA	6556098	6539538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256_6555884_6555992
transcript_38058.known	chr12	-	6673	40	FSM	ENSG00000111642.16	ENST00000645022.1	6673	40	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_37	193.284292902894	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	5998	False	NA	-12	True	AATAAA	-18	NA	6607582	6570081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
transcript_38071.known	chr12	-	2791	17	FSM	ENSG00000111641.12	ENST00000620535.4	2791	17	0	0	0	0	multi-exon	FALSE	non_canonical	1	3	junction_11	124.083247635408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTATTTTTGAGGG	9084	False	NA	-3	True	AATACA	-18	NA	6568332	6556869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6564149_6564249_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_38073.nic	chr12	-	2758	16	NIC	ENSG00000111641.12	novel	2701	16	NA	NA	-11	0	combination_of_known_junctions	FALSE	non_canonical	3	103	junction_15	84.1394081272266	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	9073	False	NA	-4	True	AATACA	-17	NA	6568343	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_38074.known	chr12	-	3038	16	FSM	ENSG00000111641.12	ENST00000541778.5	3038	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	104.945615545492	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	8725	False	NA	-4	True	AATACA	-17	NA	6568691	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_38075.nic	chr12	-	2770	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	non_canonical	3	103	junction_15	74.9603154268236	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	9073	False	NA	-4	True	AATACA	-17	NA	6568343	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_38076.nic	chr12	-	2715	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-24	0	combination_of_known_junctions	FALSE	non_canonical	3	264	junction_12	37.7137758503294	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	9060	False	NA	-4	True	AATACA	-17	NA	6568356	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_38092.nic	chr12	-	2835	15	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-24	0	intron_retention	FALSE	non_canonical	3	264	junction_11	38.1289434226889	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	9060	False	NA	-4	True	AATACA	-17	NA	6568356	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_38123.known	chr12	-	630	4	FSM	ENSG00000111641.12	ENST00000545915.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	24.8596057893121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCAGCACCTGGCAGTGA	-33	True	NA	NA	False	NA	NA	NA	6568325	6566259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568206
transcript_38129.known	chr12	-	508	2	FSM	ENSG00000111641.12	ENST00000546053.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCAAGAGGAAGTAGTG	1	True	NA	NA	False	NA	NA	NA	6568291	6567499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6567923_6568206
transcript_38131.known	chr12	-	2701	16	FSM	ENSG00000111641.12	ENST00000399466.6	2701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	119.507991364595	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	6	True	NA	-4	True	AATACA	-17	NA	6568286	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_38132.known	chr12	-	2650	16	FSM	ENSG00000111641.12	ENST00000322166.10	2650	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	98.0475168250352	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	1	True	NA	-4	True	AATACA	-17	NA	6568291	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_38133.known	chr12	-	2751	17	FSM	ENSG00000111641.12	ENST00000545200.5	2751	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	149.741443829022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	10	True	NA	-4	True	AATACA	-17	NA	6568282	6556870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6558015_6558138_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_38134.known	chr12	-	2683	2	FSM	ENSG00000184574.10	ENST00000329858.9	2683	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGCTCAGGGTTTTCC	-4	True	NA	NA	False	AATAAA	-20	NA	6635959	6618834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6621465_6635906
transcript_38135.known	chr12	-	1905	10	FSM	ENSG00000111644.8	ENST00000229243.7	1905	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.48451997499977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGGCCTGTTCTGG	-14	True	NA	NA	False	CATAAA	-14	NA	6647432	6638074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6638405_6638953_6639038_6640059_6640228_6640342_6640523_6643538_6643672_6644136_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
transcript_38136.known	chr12	-	1053	5	FSM	ENSG00000111644.8	ENST00000536350.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCAGATCCACTCAGA	55	False	NA	NA	False	NA	NA	NA	6647393	6644054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
transcript_38139.known	chr12	-	1348	8	FSM	ENSG00000111653.20	ENST00000446105.6	1348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.2445398539391	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTGGGTAGGTAAATAA	-1	True	NA	-47	True	NA	NA	NA	6663142	6650625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_38140.known	chr12	-	741	8	FSM	ENSG00000111653.20	ENST00000412586.6	741	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.2445398539391	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	40	False	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_38143.known	chr12	-	776	7	FSM	ENSG00000111653.20	ENST00000469749.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	53.2760108616752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGCAGCCACTAACGGTA	2	True	NA	NA	False	NA	NA	NA	6663114	6651011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6656726_6656799_6663064
transcript_38144.known	chr12	-	1280	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	53.4334996878259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	-1	True	NA	40	True	AGTAAA	-15	NA	6663142	6650538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
transcript_38150.known	chr12	-	401	2	FSM	ENSG00000111653.20	ENST00000493267.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGAGGCCTAGGCGGGC	12	True	NA	NA	False	NA	NA	NA	6663104	6656437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6656799_6663064
transcript_38154.known	chr12	-	2978	11	FSM	ENSG00000126746.18	ENST00000361959.7	2978	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	91.7649715305356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTTTGTTTATTTT	-2	True	NA	-21	True	TATAAA	-26	NA	6689292	6666729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_38158.nic	chr12	-	3610	11	ISM	ENSG00000126746.18	ENST00000683879.1	3407	12	407	261	-72	0	3prime_fragment	FALSE	canonical	0	0	junction_5	104.158773034248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-11	True	NA	-29	True	TATAAA	-18	NA	6688968	6666737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6677166_6677260_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
transcript_38164.known	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	87.1417810238005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-26	True	NA	61	True	NA	NA	NA	6689510	6666647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_38175.known	chr12	-	3266	10	FSM	ENSG00000126746.18	ENST00000319770.7	3266	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	73.8102338248833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-26	True	NA	-2	True	AATAAA	-15	NA	6689510	6666476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_38186.nic	chr12	-	3427	10	NIC	ENSG00000126746.18	novel	3407	12	NA	NA	-72	0	intron_retention	FALSE	canonical	0	0	junction_4	97.1959964627919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-11	True	NA	-29	True	TATAAA	-18	NA	6688968	6666737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6677166_6677260_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
transcript_38194.nic	chr12	-	2706	10	NIC	ENSG00000126746.18	novel	3008	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_9	66.0807586719967	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	3	True	NA	-29	True	TATAAA	-18	NA	6689481	6666737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_38205.nic	chr12	-	3334	9	ISM	ENSG00000126746.18	ENST00000319770.7	3266	10	542	261	-72	0	3prime_fragment	FALSE	canonical	3	184	junction_3	35.387144558441	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-11	True	NA	-29	True	TATAAA	-18	NA	6688968	6666737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
transcript_38213.nic	chr12	-	2721	9	NIC	ENSG00000126746.18	novel	2514	9	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	92.4471977671579	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-3	True	NA	-29	True	TATAAA	-18	NA	6689544	6666737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_38230.known	chr12	-	2432	6	FSM	ENSG00000139200.14	ENST00000540656.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	36.9724221548981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	415	False	NA	-7	True	AATAAA	-14	NA	6700430	6693791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
transcript_38231.known	chr12	-	2323	6	FSM	ENSG00000139200.14	ENST00000320591.9	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	25.9121593079388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	11	True	NA	-7	True	AATAAA	-14	NA	6700800	6693791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_38234.known	chr12	-	2711	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	10.0591997693654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	-4	True	NA	-6	True	AATAAA	-15	NA	6700815	6693790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_38236.known	chr12	+	1831	8	FSM	ENSG00000111652.10	ENST00000543155.6	1831	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	58.7426070033585	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	13	True	NA	31	True	AATAAA	-24	NA	6724045	6731865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38239.known	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	120.55754828703	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	38	False	NA	11	True	ATTAAA	-18	NA	6724070	6731807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38241.known	chr12	+	1832	8	FSM	ENSG00000111652.10	ENST00000539735.5	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	124.354168340565	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGCAGAAATAAATCTATG	2	True	NA	-6	True	ATTAAA	-39	NA	6724078	6731828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724251_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38242.nic	chr12	+	1811	8	NIC	ENSG00000111652.10	novel	1707	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	131.610743311867	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	99	False	NA	31	True	AATAAA	-24	NA	6724264	6731865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6724379_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38243.known	chr12	+	1707	8	FSM	ENSG00000111652.10	ENST00000534877.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	136.107850393633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGAGAAATCTATCTAC	9	True	NA	8	True	AATAAA	-1	NA	6724297	6731842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724331_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38247.known	chr12	+	898	7	FSM	ENSG00000111652.10	ENST00000538375.5	898	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	141.209950074349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCAGAGAGCCTTCT	9	True	NA	NA	False	NA	NA	NA	6724134	6731097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724180_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38249.known	chr12	+	1768	7	FSM	ENSG00000111652.10	ENST00000626119.2	1768	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	171.535629599865	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTATCTTCTGTGTT	-19	True	NA	39	True	AATAAA	-32	NA	6724013	6731873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724153_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38256.known	chr12	+	2034	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	21.7842960766593	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	-2	True	NA	41	True	AATAAA	-34	NA	6724286	6731875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_38260.known	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2988	junction_5	292.728970209646	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-1	True	NA	-19	True	AATAAA	-18	NA	6753141	6747995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
transcript_38265.nic	chr12	-	1775	8	NIC	ENSG00000089693.11	novel	1555	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	2988	junction_4	294.490289504162	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAAGTGGGATTCTGGCT	-1	True	NA	-21	True	AATAAA	-16	NA	6753141	6747997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
transcript_38276.known	chr12	+	773	5	FSM	ENSG00000159335.18	ENST00000389462.8	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	840.894464246257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGCCAAGTCCAGCCAC	13	False	NA	NA	False	NA	NA	NA	6766374	6770498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6766751_6769602_6769675_6769843_6770000_6770156_6770219_6770391
transcript_38277.known	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_2	184.005944197463	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	1	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_38285.nnic	chr12	+	1679	8	NNC	ENSG00000089692.9	novel	2587	6	NA	NA	-170	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.78232998312527	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	1575	False	NA	7	True	AATAAA	-18	NA	6772341	6778455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_6772436_6773191_6773340_6773696_6774002_6774594_6774865_6775272_6775549_6777263_6777507_6777790_6777922_6778243
transcript_38286.known	chr12	+	1976	8	FSM	ENSG00000089692.9	ENST00000203629.3	1976	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.46230122694433	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	-7	True	NA	7	True	AATAAA	-18	NA	6772519	6778455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6772911_6773191_6773340_6773696_6774002_6774594_6774865_6775272_6775549_6777263_6777507_6777790_6777922_6778243
transcript_38287.nic	chr12	+	1688	6	ISM	ENSG00000089692.9	ENST00000203629.3	1976	8	926	0	926	0	3prime_fragment	FALSE	canonical	3	10	junction_4	5.46260011349907	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	795	False	NA	7	True	AATAAA	-18	NA	6773445	6778455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_6774002_6774594_6774865_6775272_6775549_6777263_6777507_6777790_6777922_6778243
transcript_38289.known	chr12	+	1576	5	FSM	ENSG00000089692.9	ENST00000441671.6	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.40312423743285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTCTTGAGTCACAAGA	-8	True	NA	NA	False	AATAAA	-17	NA	6772518	6775733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6772911_6773191_6773340_6773696_6774002_6774594_6774865_6775272
transcript_38291.nnic	chr12	+	1679	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4487	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	-8	True	NA	5	True	AATAAA	-17	NA	6818540	6820799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_6818651_6818846_6818915_6819298
transcript_38292.known	chr12	+	3049	10	FSM	ENSG00000010610.10	ENST00000011653.9	3049	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.44029735234809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	-13	True	NA	5	True	AATAAA	-17	NA	6789527	6820799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6789663_6800071_6800188_6800306_6800472_6814141_6814301_6814758_6814993_6816055_6816404_6817129_6817331_6818420_6818543_6818846_6818915_6819298
transcript_38296.known	chr12	+	2631	15	FSM	ENSG00000110811.20	ENST00000290510.10	2631	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	18.2561144355998	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGCCAGTCAAGTGT	-3	True	NA	19	True	AATAAA	-19	NA	6828406	6839847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6828939_6829858_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_38311.known	chr12	+	1610	5	FSM	ENSG00000250510.8	ENST00000428545.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.0623058987491	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	48	False	NA	11	True	ATTAAA	-23	NA	6821703	6827421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6821901_6823467_6823764_6825483_6825674_6826195_6826354_6826652
transcript_38312.nnic	chr12	+	2091	5	NNC	ENSG00000250510.8	novel	2495	5	NA	NA	-34	0	intron_retention	FALSE	canonical	1	3	junction_2	14.6522182620926	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	131	False	NA	11	True	ATTAAA	-23	NA	6821786	6827421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_6821901_6823467_6824328_6825483_6825674_6826195_6826354_6826652
transcript_38313.nic	chr12	+	2495	5	NIC	ENSG00000250510.8	novel	2495	5	NA	NA	-51	0	intron_retention	FALSE	canonical	1	2	junction_2	15.0748134316813	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	114	False	NA	11	True	ATTAAA	-23	NA	6821769	6827421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6821901_6823467_6824715_6825483_6825674_6826195_6826354_6826652
transcript_38314.known	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.06828373317832	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	-10	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
transcript_38318.known	chr12	+	1150	4	FSM	ENSG00000250510.8	ENST00000382315.7	1150	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.0800688297608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	37	False	NA	11	True	ATTAAA	-23	NA	6821867	6827421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6821901_6825483_6825674_6826195_6826354_6826652
transcript_38321.known	chr12	+	2129	14	FSM	ENSG00000110811.20	ENST00000612048.4	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	17.1457379940598	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGGGCCAGTCAAGTG	1194	False	NA	18	True	AATAAA	-18	NA	6829827	6839846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_38322.known	chr12	+	1110	10	FSM	ENSG00000111664.11	ENST00000435982.6	1110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.864460885298	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGCTGGAGAAAGGGAAG	53	False	NA	NA	False	NA	NA	NA	6840973	6846898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6841034_6841257_6841345_6841585_6841625_6842969_6843077_6843173_6843238_6843362_6843526_6843631_6843696_6843776_6843979_6845585_6845803_6846791
transcript_38327.nic	chr12	-	3660	8	NIC	ENSG00000111665.12	novel	1144	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	129.949911857749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTGTATGTGTGTG	-15	True	NA	-11	True	AAGAAA	-14	NA	6851286	6844797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6846368_6846724_6846904_6848060_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_38334.known	chr12	-	1047	6	FSM	ENSG00000111665.12	ENST00000229265.10	1047	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	116.083762861134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	19	True	NA	-2	True	AAAAAG	-16	NA	6851252	6848815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849784_6850466_6850597_6850832_6851010_6851221
transcript_38335.known	chr12	-	1144	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	15.8189759466282	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	-15	True	NA	-14	True	ATTAAA	-34	NA	6851286	6848827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_38337.known	chr12	-	985	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	122.289615258206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAAGGTATATGT	22	True	NA	-29	True	ATTAAA	-19	NA	6851249	6848842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_38341.known	chr12	-	1327	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	16.2230545829076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	13	True	NA	-15	True	ATTAAA	-33	NA	6851258	6848828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
transcript_38357.known	chr12	+	3083	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_1	55.5018404526265	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	0	True	NA	4	True	AATAAA	-4	NA	6852147	6866620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_38359.known	chr12	+	3162	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	170.796066696198	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	2	True	NA	16	True	AATAAA	-16	NA	6852149	6866632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_38412.known	chr12	+	1615	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	3.60272006083385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	4498	False	NA	5	True	AATAAA	-15	NA	6904732	6914229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_38417.known	chr12	+	1351	7	FSM	ENSG00000111669.15	ENST00000396705.10	1351	7	0	0	0	0	multi-exon	FALSE	canonical	3	10131	junction_6	486.203575333077	11923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTATTTTTACTTG	3	True	NA	26	True	AAGAAA	-35	NA	6867530	6870948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6867682_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_38423.known	chr12	+	1587	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	3990.89998204248	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAACATCTCTTACTAT	-11	True	NA	17	True	TATAAA	-45	NA	6868113	6870939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_38424.known	chr12	+	791	7	FSM	ENSG00000111669.15	ENST00000488464.6	791	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4057.87951261356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCATCTTCCCTAC	-25	True	NA	NA	False	NA	NA	NA	6868099	6870383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6868256_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_38426.known	chr12	+	1208	7	FSM	ENSG00000010626.15	ENST00000323702.9	1208	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	3.19722101554181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	-1	True	NA	4	True	AATAAA	-14	NA	6904840	6914228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6913890
transcript_38427.known	chr12	+	1412	7	FSM	ENSG00000010626.15	ENST00000451681.5	1412	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.8151743807532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTCGGATTTCCAATAA	4556	False	NA	-30	True	NA	NA	NA	6904790	6914194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_38448.known	chr12	+	587	3	FSM	ENSG00000240370.6	ENST00000451612.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAAATGCCCATCGGC	3	True	NA	NA	False	NA	NA	NA	6873478	6884438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6873782_6883703_6883920_6884370
transcript_38451.known	chr12	-	1203	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	42	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-7	True	NA	-4	True	AGTAAA	-27	NA	6873303	6870934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6871320_6872237_6872998_6873245
transcript_38457.known	chr12	-	1496	2	FSM	ENSG00000111671.10	ENST00000519357.1	1496	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCAAAGCCTGGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	6873336	6871592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6872998_6873245
transcript_38458.known	chr12	+	2294	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_1	51.9702712222006	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTAAGGAGTCT	-7	True	NA	26	True	ATTAAA	-16	NA	6914579	6923697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
transcript_38459.known	chr12	-	1205	3	FSM	ENSG00000111671.10	ENST00000523102.5	1205	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	11	True	NA	-4	True	AGTAAA	-27	NA	6873285	6870934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6871320_6872237_6872987_6873214
transcript_38460.nic	chr12	+	2810	5	NIC	ENSG00000111676.15	novel	4351	10	NA	NA	-894	-51	intron_retention	FALSE	canonical	3	97	junction_1	16.3477827242718	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCCAACCAAAACCAACC	133	False	NA	-14	True	TATAAA	-26	NA	6936803	6942270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_38461.nic	chr12	+	2460	5	NIC	ENSG00000111676.15	novel	4351	10	NA	NA	-493	0	intron_retention	FALSE	canonical	3	97	junction_1	16.3477827242718	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	374	False	NA	37	True	AAAACA	-21	NA	6937204	6942321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_38462.known	chr12	+	4351	10	FSM	ENSG00000111676.15	ENST00000356654.8	4351	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.7826600777533	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	-1	True	NA	37	True	AAAACA	-21	NA	6924462	6942321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6924538_6933839_6934029_6934175_6934314_6934464_6934579_6935546_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_38463.known	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	9	False	NA	17	True	AATAAA	-10	NA	6944121	6945996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6944174_6944379_6944653_6945770
transcript_38464.known	chr12	+	662	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	544.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	17	False	NA	23	True	AATAAA	-16	NA	6943833	6946002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6944174_6944475_6944566_6945770
transcript_38465.known	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_2	126	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	0	True	NA	23	True	AATAAA	-16	NA	6944021	6946002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6944174_6944475_6944653_6945770
transcript_38466.known	chr12	+	980	2	FSM	ENSG00000111678.11	ENST00000544681.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	1268	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATGAAGTCAGGTGTGG	0	True	NA	NA	False	NA	NA	NA	6943816	6945098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6944174_6944475
transcript_38467.known	chr12	-	1097	1	FSM	ENSG00000272173.1	ENST00000607421.1	1097	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCGCAGTTTCCTAAAG	9043	False	NA	-3	True	AGTAAA	-18	NA	6944604	6943507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6943500_6944600
transcript_38470.nnic	chr12	+	2221	17	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	45.9741775347858	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	5	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6946740_6951458_6951521_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_38474.known	chr12	+	2159	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	36.2580872204932	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	5	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_38482.nic	chr12	+	2062	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	-23	0	intron_retention	TRUE	canonical	2	9	junction_1	42.7680025347961	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	2014	False	NA	10	True	AATAAA	-18	NA	6946550	6961316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6946740_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_38483.nic	chr12	+	2107	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_1	43.0422194253645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	5	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6946740_6951911_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_38485.nnic	chr12	+	1849	14	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	-5	0	intron_retention	FALSE	canonical	3	9	junction_1	43.8219906428876	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	-3	True	NA	10	True	AATAAA	-18	NA	6946568	6961316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6946740_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_38486.known	chr12	+	2161	16	FSM	ENSG00000111679.17	ENST00000318974.14	2161	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	41.9372017293583	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	-40	True	NA	10	True	AATAAA	-18	NA	6951355	6961316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6951521_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_38487.known	chr12	+	350	2	FSM	ENSG00000257084.1	ENST00000537269.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACCTGTCTTTTGTCTA	28	False	NA	28	True	AATAAA	-42	NA	6963245	6964447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6963349_6964200
transcript_38492.known	chr12	-	1379	10	FSM	ENSG00000215021.10	ENST00000535923.6	1379	10	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	527.980662758508	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	0	True	NA	4	True	NA	NA	NA	6970664	6965326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_38501.known	chr12	-	1354	9	FSM	ENSG00000215021.10	ENST00000440277.6	1354	9	0	0	0	0	multi-exon	FALSE	canonical	1	85	junction_4	645.079052810584	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	8783	False	NA	4	True	NA	NA	NA	6970753	6965326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_38505.known	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	552.997513556797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8820	False	NA	-21	True	AATAAA	-21	NA	6970716	6965351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_38506.known	chr12	-	1735	9	FSM	ENSG00000215021.10	ENST00000677354.1	1735	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	554.93489201437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	4	True	NA	-21	True	AATAAA	-21	NA	6970618	6965351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_38513.known	chr12	-	1391	8	FSM	ENSG00000215021.10	ENST00000676496.1	1391	8	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_3	644.923630979605	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8812	False	NA	-21	True	AATAAA	-21	NA	6970724	6965351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6966423_6966501_6967170_6967336_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_38527.nic	chr12	-	1934	7	NIC	ENSG00000215021.10	novel	1391	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	118	junction_1	514.206076285461	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8825	False	NA	-21	True	AATAAA	-21	NA	6970711	6965351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6965713_6966423_6966501_6967170_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_38540.known	chr12	-	1471	6	FSM	ENSG00000215021.10	ENST00000678000.1	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	54.8612796059297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACCTTGTGCTGAACCT	14	True	NA	NA	False	NA	NA	NA	6970650	6966464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6966501_6967170_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_38546.known	chr12	-	858	4	FSM	ENSG00000215021.10	ENST00000546111.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	698.399280895646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8785	False	NA	-21	True	AATAAA	-21	NA	6970751	6965351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6966423_6966501_6970195_6970281_6970416
transcript_38551.known	chr12	-	270	1	FSM	ENSG00000238795.1	ENST00000459155.1	270	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGAGGAGGACTGGAGC	-1	True	NA	NA	False	NA	NA	NA	6967606	6967336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6967300_6967600
transcript_38557.known	chr12	-	2235	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_8	44.4762733250987	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	22	True	NA	-8	True	GATAAA	-27	NA	7018476	6976184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_38560.known	chr12	+	2972	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	5.31487853899762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	NA	False	NA	7	True	AATAAA	-18	NA	7060514	7071032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_38561.known	chr12	+	2682	12	FSM	ENSG00000182326.16	ENST00000360817.10	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.85923019793528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	3	True	NA	7	True	AATAAA	-18	NA	7060717	7071032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7060878_7061838_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_38579.known	chr12	-	2902	11	FSM	ENSG00000111684.11	ENST00000535479.5	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_6	42.5536132425908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTAGCATTCCTGACTG	21	True	NA	-9	True	GATAAA	-26	NA	7018477	6976185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6976892_6977133_6977263_6977366_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_38588.known	chr12	+	958	8	FSM	ENSG00000126749.16	ENST00000261406.7	958	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	289.222956155536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAGAATGCAGC	2	False	NA	NA	False	NA	NA	NA	6970941	6988260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6983001_6983207_6987781_6987839_6988167
transcript_38593.known	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	50.8385680364819	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	-3	True	NA	14	True	AATAAA	-16	NA	6970912	6979936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
transcript_38595.known	chr12	+	616	5	FSM	ENSG00000126749.16	ENST00000539196.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	235.086154420034	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGTTTTGGGGTTCC	121	False	NA	NA	False	NA	NA	NA	6971060	6975977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975695
transcript_38596.known	chr12	-	1881	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	7.35014907046277	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGCTGGACACCCA	8432	False	NA	NA	False	AAAACA	-1	NA	7090792	7080740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
transcript_38597.known	chr12	-	3335	6	FSM	ENSG00000139178.12	ENST00000266542.9	3335	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.62138772902208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTGTATGTCTAGA	13	True	NA	-5	True	AATATA	-13	NA	7109214	7094553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7097164_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
transcript_38598.known	chr12	-	1569	6	FSM	ENSG00000139178.12	ENST00000544702.5	1569	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.70973410695855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGGCTTGAACAGGG	-11	True	NA	NA	False	NA	NA	NA	7109238	7096390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7097164_7099685_7099808_7099900_7100027_7101897_7102088_7108250_7108480_7109109
transcript_38604.known	chr12	-	592	5	FSM	ENSG00000139178.12	ENST00000543933.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.24662100445346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCACCCCCATTGCCC	30	True	NA	NA	False	NA	NA	NA	7109197	7097153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7097164_7099685_7099761_7101897_7102088_7108250_7108480_7109109
transcript_38608.known	chr12	-	957	4	FSM	ENSG00000139194.8	ENST00000266560.8	957	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-1	True	NA	-15	True	TTTAAA	-16	NA	7128889	7123685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7124175_7124628_7124731_7128239_7128419_7128702
transcript_38609.known	chr12	-	813	3	FSM	ENSG00000139178.12	ENST00000545337.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTCAGATTTGTTTT	17	True	NA	-2	True	AGTAAA	-17	NA	7109210	7101604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7102088_7108250_7108480_7109109
transcript_38610.known	chr12	-	532	3	FSM	ENSG00000139194.8	ENST00000542784.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCCCTTCAAGCCCAGA	6203	False	NA	NA	False	NA	NA	NA	7128561	7124066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7124175_7124628_7124731_7128239
transcript_38611.known	chr12	-	354	2	FSM	ENSG00000139178.12	ENST00000539927.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTAGGGGCAGTCG	99	False	NA	NA	False	NA	NA	NA	7109128	7108144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7108480_7109109
transcript_38614.known	chr12	-	564	3	FSM	ENSG00000139194.8	ENST00000542370.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAGAGCATGTACATTG	5891	False	NA	NA	False	AATAAA	-23	NA	7128873	7127498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7127713_7128239_7128419_7128702
transcript_38620.known	chr12	+	4013	18	FSM	ENSG00000139182.15	ENST00000266546.11	4013	18	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_6	11.122159059523	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	-28	True	NA	NA	False	AATAAA	-22	NA	7130370	7158945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940
transcript_38622.nic	chr12	+	3419	17	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	29.1129266821459	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	0	True	NA	24	True	AATAAA	-25	NA	7189698	7211459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7189751_7190021_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38623.known	chr12	+	2477	16	FSM	ENSG00000139197.11	ENST00000420616.6	2477	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	23.6242812941826	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCGCTTTGGATGTGAT	16	True	NA	NA	False	NA	NA	NA	7189714	7210262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38626.known	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	22.4881203206394	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	-13	True	NA	24	True	AATAAA	-25	NA	7189685	7211459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38627.nic	chr12	+	3221	16	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	29.1849276168367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	-21	True	NA	24	True	AATAAA	-25	NA	7189677	7211459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203455_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38628.known	chr12	+	2253	16	FSM	ENSG00000139197.11	ENST00000434354.6	2253	16	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	28.3365488371467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAATTCAAGGGCTGT	-12	True	NA	NA	False	NA	NA	NA	7189686	7210431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38634.known	chr12	+	2105	16	FSM	ENSG00000139197.11	ENST00000412720.6	2105	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	26.8482153348536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGATCCCCGCTTTGGA	110	False	NA	NA	False	NA	NA	NA	7189844	7210256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189981_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38637.nic	chr12	+	3584	15	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	23	junction_1	20.6991323884035	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	-5	True	NA	24	True	AATAAA	-25	NA	7189693	7211459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38640.known	chr12	+	3252	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	19.2072477816823	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	-17	True	NA	48	True	AATAAA	-21	NA	7189583	7211483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38646.nic	chr12	+	3179	15	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	2	13	junction_2	26.8803091576002	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	-21	True	NA	24	True	AATAAA	-25	NA	7189677	7211459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38654.known	chr12	+	3170	15	FSM	ENSG00000139197.11	ENST00000266564.7	3170	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	27.2415498974696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGCTGGTCATGAA	422	False	NA	45	True	AATAAA	-18	NA	7190360	7211480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203455_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_38656.nnic	chr12	+	2366	14	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4499	5	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	15.2156101717745	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTCAAGACAATTTC	NA	False	NA	7	True	AATAAA	-15	NA	7299572	7328724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025_7318183_7320724_7320805_7322417_7322542_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
transcript_38662.known	chr12	-	1236	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTGTTTATAATTT	0	True	NA	15	True	AATAAA	-42	NA	7695775	7689783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7690705_7695460
transcript_38663.known	chr12	+	1100	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	-1	True	NA	NA	False	AATAAA	-27	NA	7711432	7717559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
transcript_38664.known	chr12	+	836	6	FSM	ENSG00000111704.11	ENST00000541267.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	213.917367223889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAGTCCTGGAGC	NA	False	NA	NA	False	NA	NA	NA	7787793	7794808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7787844_7788418_7788579_7789619_7789766_7792949_7793213_7794456_7794544_7794678
transcript_38674.known	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	62.8295754844449	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	-4	True	NA	28	True	AATAAA	-19	NA	7789401	7799146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
transcript_38677.known	chr12	+	870	4	FSM	ENSG00000111704.11	ENST00000526286.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	206.515536138729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGTGAAACTGATATT	185	False	NA	NA	False	NA	NA	NA	7789614	7795095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794726
transcript_38686.known	chr12	-	3827	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	215.098943641189	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	-2	True	NA	-24	True	AATAAA	-19	NA	7936187	7919229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_38694.known	chr12	-	4414	9	FSM	ENSG00000059804.16	ENST00000486749.5	4414	9	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	207.254938119698	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGGGCTTATTTACT	156	False	NA	-25	True	AATAAA	-18	NA	7936167	7919230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_38711.known	chr12	-	1784	5	FSM	ENSG00000059804.16	ENST00000495813.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	3428	junction_2	120.819079619073	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGAGACTGTGTCT	154	False	NA	NA	False	NA	NA	NA	7936169	7929503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_38716.known	chr12	+	5524	11	FSM	ENSG00000065970.9	ENST00000162391.8	5524	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	8.96437393240599	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGGTAGTGGTCTCA	-2	True	NA	37	True	AATAAA	-28	NA	8032715	8055517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8033834_8039818_8040166_8042657_8042733_8043700_8043770_8043950_8044092_8044759_8044959_8047881_8048290_8048696_8048799_8049361_8049572_8050521_8050621_8052761
transcript_38719.known	chr12	+	2634	8	FSM	ENSG00000089818.18	ENST00000339754.11	2634	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_5	21.138995786393	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCTTTTAAGAAGTTGA	-3	True	NA	135	True	AATAAA	-30	NA	8082273	8097881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_38720.known	chr12	+	2446	7	FSM	ENSG00000089818.18	ENST00000450991.6	2446	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	75.5792446523662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTTATCTTTTAAT	-9	True	NA	23	True	ATTAAA	-14	NA	8082267	8097769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_38721.known	chr12	+	3418	6	FSM	ENSG00000089818.18	ENST00000537796.2	3418	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	19.0094713235271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAAAGTGTCTCTTTT	3	True	NA	13	True	ATTAAA	-4	NA	8082279	8097759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8093056_8095600_8095704_8096041
transcript_38727.known	chr12	+	2517	8	FSM	ENSG00000089818.18	ENST00000638237.1	2517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.0607916890009	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTTTTATCTTTTAA	-11	True	NA	22	True	ATTAAA	-13	NA	8082265	8097768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093044_8095600_8095704_8096041
transcript_38731.nnic	chr12	-	2031	5	NNC	ENSG00000164845.16	novel	829	7	NA	NA	-51	1320	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	8.72854512504805	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	-45	True	AATAAA	-17	NA	8242999	8231191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_8232608_8234275_8234426_8235600_8235735_8238666_8238750_8242751
transcript_38746.nic	chr12	-	2471	3	ISM	ENSG00000226091.7	ENST00000538304.1	2157	7	-236	4313	72	-4301	5prime_fragment	FALSE	canonical	3	10	junction_1	11.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTATGGTGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	8396731	8388417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_8390512_8390901_8390970_8396422
transcript_38747.known	chr12	-	662	2	FSM	ENSG00000226091.7	ENST00000420040.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	5962	False	NA	3	True	TATAAA	-23	NA	8390752	8356962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_8357142_8390269
transcript_38748.nic	chr12	-	2914	2	ISM	ENSG00000226091.7	ENST00000544461.1	3033	5	19	92432	19	-4301	5prime_fragment	FALSE	canonical	3	33	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTATGGTGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	8396784	8388417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_8390970_8396422
transcript_38749.nnic	chr12	-	566	2	NNC	ENSG00000226091.7	novel	3033	5	NA	NA	-1	-11302	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8396804	8395418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_8395603_8396422
transcript_38754.nic	chr12	+	1888	9	NIC	ENSG00000166532.16	novel	1519	8	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	296.76545347294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	150	False	NA	16	True	AATAAA	-16	NA	8697860	8783085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_38757.known	chr12	+	5830	7	FSM	ENSG00000166532.16	ENST00000357529.7	5830	7	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	157.9789015449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	15	True	NA	10	True	AATATA	-21	NA	8697921	8777191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8698298_8699784_8700615_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_38760.known	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	20.2227594556233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	12	True	NA	10	True	AATATA	-21	NA	8697990	8777191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_38772.known	chr12	+	1893	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	1787	False	NA	26	True	AATAAA	-26	NA	8779030	8783095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8780740_8782911
transcript_38791.nic	chr12	+	5218	15	NIC	ENSG00000111752.11	novel	618	6	NA	NA	-92	0	intron_retention	FALSE	canonical	3	296	junction_1	816.110611750788	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	NA	False	NA	22	True	ATTAAA	-21	NA	8913803	8941467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_8913951_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_38797.known	chr12	+	5390	15	FSM	ENSG00000111752.11	ENST00000544916.6	5390	15	0	0	0	0	multi-exon	FALSE	canonical	3	2180	junction_5	423.199113652094	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	20	True	NA	22	True	ATTAAA	-21	NA	8914508	8941467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_38838.known	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_2	38.903370319578	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	6	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_38842.nic	chr12	-	2944	6	NIC	ENSG00000003056.8	novel	2450	7	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	674	junction_1	39.3974618471799	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGGCCTTGTCATTTG	-17	True	NA	NA	False	ATTAAA	-13	NA	8949668	8940364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_38847.known	chr12	+	809	3	FSM	ENSG00000249790.3	ENST00000540299.1	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAACCCAAAATGAGT	54	False	NA	NA	False	NA	NA	NA	8788273	8794336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8788787_8789999_8790264_8794304
transcript_38849.known	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	34	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-4	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_8945585_8946228_8946406_8949487
transcript_38850.known	chr12	+	1972	2	FSM	ENSG00000249790.3	ENST00000514568.2	1972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCATGCTGCT	54	False	NA	NA	False	AATAAA	-16	NA	8788273	8795789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8788761_8794304
transcript_38851.known	chr12	+	723	2	FSM	ENSG00000249790.3	ENST00000422780.3	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	1068	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTCCCAACAGCAGTT	37	False	NA	NA	False	NA	NA	NA	8788256	8794497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8788787_8794304
transcript_38852.nnic	chr12	+	530	2	Antisense	novelGene_ENSG00000256904.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	985	junction_1	0	198	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGCGTGA	9463	False	NA	25	True	AATAAA	-14	NA	8805141	8821087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_+_8805430_8820845
transcript_38855.known	chr12	+	4292	16	FSM	ENSG00000111752.11	ENST00000543824.5	4292	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1100.92332158057	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATGGTTTTTTTTCTTC	7	True	NA	19	True	NA	NA	NA	8914552	8940404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8914828_8916060_8916070_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_38857.known	chr12	+	592	5	FSM	ENSG00000139187.10	ENST00000539240.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.65660395791398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCGGTGCCATCAAC	-31	True	NA	NA	False	NA	NA	NA	8950043	9009448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8950237_8992205_8992311_8995118_8995289_9008974_9009076_9009425
transcript_38859.known	chr12	+	427	4	FSM	ENSG00000139187.10	ENST00000544226.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.07106781186548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGAAGGTCAGACTTTG	32	True	NA	NA	False	NA	NA	NA	8950106	9009516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8950237_8992205_8992311_9008974_9009076_9009425
transcript_3892.known	chr1	-	1045	9	FSM	ENSG00000117122.14	ENST00000375535.4	1045	9	0	0	0	0	multi-exon	FALSE	canonical	3	4186	junction_8	418.305790510961	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	14	True	NA	NA	False	ATTAAA	-18	NA	16980620	16974501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586
transcript_38970.known	chr12	+	2612	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.9283882771841	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	2745	False	NA	NA	False	GATAAA	-16	NA	9648046	9658412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
transcript_38971.known	chr12	-	2456	6	FSM	ENSG00000173391.9	ENST00000309539.8	2456	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTATGAACATAGGATT	-2	True	NA	NA	False	AATAAA	-25	NA	10172132	10158300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10160022_10160346_10160463_10160785_10160926_10166711_10166958_10169073_10169176_10172001
transcript_38973.known	chr12	+	792	6	FSM	ENSG00000139112.11	ENST00000535576.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	199.560116255729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGGAAGCCCAGCAGA	12	False	NA	NA	False	NA	NA	NA	10213439	10221852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_10213715_10213835_10213975_10214073_10214188_10218062_10218142_10220439_10220559_10221786
transcript_38977.known	chr12	+	1883	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	12.8322510366134	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGAGTTCAGCAATGT	-31	True	NA	20	True	AATAAA	-21	NA	10212876	10223128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
transcript_38978.known	chr12	+	2294	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	186.719635341927	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	1	True	NA	15	True	AATAAA	-16	NA	10213428	10223123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
transcript_38980.known	chr12	-	1057	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	443.520732322628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	6	True	NA	-10	True	AATAAA	-16	NA	10613594	10606012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
transcript_38981.known	chr12	-	705	6	FSM	ENSG00000111196.10	ENST00000540074.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	460.660221855545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGTATATTTAATTA	9	True	NA	4	True	ATTAAA	-25	NA	10613591	10606259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613540
transcript_38982.known	chr12	-	868	6	FSM	ENSG00000111196.10	ENST00000545236.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	449.71172988927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCAGGCTGTTTGTA	-9	True	NA	-6	True	ATTAAA	-15	NA	10613609	10606269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10612639_10612979_10613438
transcript_38987.known	chr12	-	2606	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	52.9404146187013	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTTTCCAAGTACT	-9	True	NA	NA	False	AATAAA	-18	NA	10613609	10604192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
transcript_38988.known	chr12	-	666	5	FSM	ENSG00000111196.10	ENST00000539554.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	418.270247567288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	9	True	NA	-10	True	AATAAA	-16	NA	10613591	10606012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613540
transcript_38990.known	chr12	-	559	3	FSM	ENSG00000111196.10	ENST00000544176.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_2	64.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCCAGCCAACGTTAGG	0	True	NA	NA	False	NA	NA	NA	10613600	10609603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10609942_10610621_10610681_10613438
transcript_38996.nnic	chr12	-	1984	11	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	-213	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1220.18449834441	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	513	False	NA	-32	True	AATAAA	-20	NA	10723536	10699088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849_10722903_10723062
transcript_38997.known	chr12	-	1931	10	FSM	ENSG00000060138.13	ENST00000228251.9	1931	10	0	0	0	0	multi-exon	FALSE	canonical	3	2902	junction_3	524.543611151637	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	6	True	NA	-32	True	AATAAA	-20	NA	10723323	10699088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
transcript_39.known	ERCC-00109	+	520	1	FSM	ERCC-00109A	DQ854998	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00109_+_0_500
transcript_39027.known	chr12	-	1708	9	FSM	ENSG00000060138.13	ENST00000279550.11	1708	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_4	1263.37484540417	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	22	True	NA	-32	True	AATAAA	-20	NA	10723307	10699088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
transcript_3904.nnic	chr1	-	1040	8	NIC	ENSG00000117122.14	novel	1045	9	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_6	1771.61628037732	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	903	False	NA	NA	False	ATTAAA	-18	NA	16980705	16974501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16978236_16978315_16980586
transcript_39050.known	chr12	+	4823	1	FSM	ENSG00000256537.5	ENST00000622602.2	4823	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTATGGTATTTTTT	-19	True	NA	8	True	AATAAA	-20	NA	11171193	11176016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_11171200_11176000
transcript_39052.known	chr12	+	6144	8	FSM	ENSG00000139083.11	ENST00000396373.9	6144	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	10.1940358713779	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTTTTTATAAAAAAAA	-35	True	NA	NA	False	AAGAAA	-24	NA	11649673	11895377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_11650161_11752449_11752580_11839139_11839305_11853426_11853562_11869423_11869970_11884444_11884588_11885925_11886027_11890940
transcript_39053.known	chr12	+	1897	6	FSM	ENSG00000121380.12	ENST00000308721.9	1897	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.89736659610103	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	-3	True	NA	NA	False	AATAAA	-25	NA	12070938	12099695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12071138_12079298_12079739_12087212_12087387_12090778_12090850_12094663_12094931_12098949
transcript_39055.known	chr12	-	10252	23	FSM	ENSG00000070018.9	ENST00000261349.9	10252	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_13	43.0960152325667	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCCTTTCTTTTCA	-31	True	NA	NA	False	AATAAA	-18	NA	12267044	12116024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
transcript_39064.known	chr12	-	2220	5	FSM	ENSG00000111261.14	ENST00000396349.3	2220	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	19.4550764583437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGTTCTCATAAGTAG	11	True	NA	-14	True	AATAAA	-14	NA	12350241	12329264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12330959_12338419_12338561_12343091_12343174_12343275_12343415_12350077
transcript_39065.known	chr12	-	5532	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	4.54606056566195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGAGTATTCTATGATTTA	10	True	NA	NA	False	AATAAA	-25	NA	12350242	12326055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
transcript_39070.known	chr12	+	580	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	40.9416929574514	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGCCTGGGGCTGGG	-4	True	NA	NA	False	NA	NA	NA	12357078	12465783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
transcript_39072.known	chr12	+	6422	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	16.1314048434171	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCCAGGACAATGCTG	-5	True	NA	NA	False	AATAAA	-27	NA	12357077	12471233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
transcript_39074.known	chr12	+	554	3	FSM	ENSG00000165714.11	ENST00000543990.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATTGCTTTTTCCCAGC	12	False	NA	NA	False	NA	NA	NA	12357357	12435885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357510_12361205_12361350_12435627
transcript_39075.known	chr12	+	549	3	FSM	ENSG00000165714.11	ENST00000298571.6	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCATCTGACCAGGTC	72	False	NA	NA	False	GGGGCT	-45	NA	12357417	12465844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357510_12435627_12435786_12465545
transcript_39080.known	chr12	-	6661	7	FSM	ENSG00000111266.9	ENST00000298573.9	6661	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	9.68532681717842	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGGGAGGCTGGGGGC	0	True	NA	NA	False	ATTAAA	-2	NA	12562863	12473281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12478016_12480222_12480347_12487027_12487188_12500518_12500683_12519861_12520001_12520870_12521464_12562116
transcript_39083.known	chr12	-	3402	6	FSM	ENSG00000111266.9	ENST00000228862.3	3402	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	20.4685124032012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAATGTGAATTTATT	517	False	NA	-11	True	AATAAA	-16	NA	12562383	12475896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12478016_12480222_12480347_12487027_12487188_12519861_12520001_12520870_12521464_12562116
transcript_39086.known	chr12	+	3770	4	FSM	ENSG00000111269.3	ENST00000228865.3	3770	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	3.68178700572909	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTTTGACTATTGT	-3	True	NA	17	True	ATTAAA	-18	NA	12611875	12645108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12612188_12635776_12635975_12637569_12637715_12641993
transcript_39093.known	chr12	-	553	4	FSM	ENSG00000183150.8	ENST00000540796.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	62.9444199274249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCCGGGGAAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	12696207	12662270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12662471_12684350_12684508_12695458_12695512_12696064
transcript_39095.known	chr12	+	2411	3	FSM	ENSG00000111276.12	ENST00000228872.9	2411	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	4.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGAGTCAAATTGTAA	-8	True	NA	14	True	AATAAA	-18	NA	12717367	12722369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12718315_12718824_12718955_12721035
transcript_39096.known	chr12	+	4335	2	FSM	ENSG00000111276.12	ENST00000614874.2	4335	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGGTAGAATAGGTT	-8	True	NA	NA	False	AATATA	-38	NA	12717367	12722212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12718315_12718824
transcript_39097.known	chr12	-	1751	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTGATTAATGATTCA	7	True	NA	NA	False	CATAAA	-17	NA	12684521	12660890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12662471_12684350
transcript_39099.known	chr12	+	4724	2	FSM	ENSG00000178878.13	ENST00000326765.10	4724	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTATCTTTCTGTAAT	14	True	NA	6	True	AATAAA	-17	NA	12725930	12791466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12726097_12786908
transcript_39100.known	chr12	+	1698	11	FSM	ENSG00000213782.7	ENST00000352940.8	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	216.22083618375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	5110	False	NA	27	True	AATAAA	-21	NA	12813315	12829979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_39101.known	chr12	+	2357	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_6	52.3030591839521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	1	True	NA	27	True	AATAAA	-21	NA	12813353	12829979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_39102.known	chr12	+	838	4	FSM	ENSG00000247498.11	ENST00000660059.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.0489491367259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTATGACAACCTTC	6	True	NA	98	True	AATACA	-24	NA	12927726	12980562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12927804_12966758_12966858_12979523_12979623_12979999
transcript_39104.known	chr12	-	1159	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	6.84754619472471	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCATAAGTGTAATT	-14	True	NA	-8	True	AATAAA	-23	NA	13000265	12974869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
transcript_39105.known	chr12	+	740	3	FSM	ENSG00000247498.11	ENST00000543515.8	758	3	18	0	3	0	multi-exon	FALSE	canonical	3	27	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGACAACCTTCTGTC	9	True	NA	102	True	AATACA	-28	NA	12927729	12980566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12927804_12979523_12979623_12979999
transcript_39108.known	chr12	+	4411	1	FSM	ENSG00000183935.5	ENST00000624664.1	4411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTAACTTTCCCAGGCA	NA	False	NA	NA	False	AATAAA	-27	NA	13000419	13004830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_13000400_13004800
transcript_39110.known	chr12	+	4711	13	FSM	ENSG00000084444.14	ENST00000197268.13	4711	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_10	5.87130498460285	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	-9	True	NA	14	True	AATAAA	-18	NA	13044380	13083449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624
transcript_39118.known	chr12	+	8823	15	FSM	ENSG00000171681.13	ENST00000261168.9	8823	15	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	40.3800819762437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGAGTACTCTGATTA	3	True	NA	35	True	AATAAA	-17	NA	14365681	14502930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
transcript_39120.known	chr12	+	8774	15	FSM	ENSG00000171681.13	ENST00000536444.5	8774	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	74.0828273361813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGTACTCTGATTAA	50	False	NA	36	True	AATAAA	-18	NA	14365728	14502931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
transcript_39122.known	chr12	+	4847	15	FSM	ENSG00000171681.13	ENST00000544627.5	4847	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	94.3420827172507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGTTGTTGCTTAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	14385063	14498763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14385401_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
transcript_39127.nic	chr12	+	3854	13	ISM	ENSG00000171681.13	ENST00000261168.9	8823	15	-45	21369	-39	-345	5prime_fragment	TRUE	canonical	3	260	junction_2	31.1778054961467	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAGTATAACCAAAACTA	-2	True	NA	4	True	ATTAAA	-22	NA	14365636	14481561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
transcript_39129.known	chr12	+	4887	13	FSM	ENSG00000171681.13	ENST00000543189.5	4887	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	75.9850131422126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACTGACTCAAATGTT	14	True	NA	5	True	ATTAAA	-19	NA	14365692	14482653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
transcript_39131.known	chr12	+	3563	11	FSM	ENSG00000171681.13	ENST00000537653.5	3563	11	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	30.0359784258812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATAGAATCAAATCTT	-2	True	NA	NA	False	NA	NA	NA	14365676	14476432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889
transcript_39143.nic	chr12	+	1388	2	ISM	ENSG00000171681.13	ENST00000545723.1	577	4	-51	13142	-39	-356	5prime_fragment	FALSE	canonical	3	356	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGATGAAACTTCTG	-2	True	NA	NA	False	NA	NA	NA	14365636	14425105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_14365828_14423908
transcript_39148.known	chr12	-	1960	11	FSM	ENSG00000121316.11	ENST00000240617.10	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	10.4809350727881	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	476	False	14567903	-6	True	AATAAA	-23	NA	14567883	14503660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
transcript_39152.known	chr12	+	644	1	FSM	ENSG00000246705.5	ENST00000544848.3	620	1	-22	-2	-22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAGAGAGCTGTGTAG	-6	True	NA	27	True	AATAAA	-17	NA	14774382	14775026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14774400_14775000
transcript_39153.known	chr12	-	4581	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_3	103.796845443236	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAAGGGTTATTTATA	8	True	NA	-1	True	ATTAAA	-18	NA	14803478	14784581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_39166.known	chr12	-	554	2	FSM	ENSG00000084463.8	ENST00000543316.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1457	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTATGAAACATTAAAC	10	True	NA	NA	False	NA	NA	NA	14803476	14800999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_14801429_14803351
transcript_39167.known	chr12	+	1586	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAGTCTTTGGTTCTCA	-6	True	NA	NA	False	AAGAAA	-26	NA	14803669	14824415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14803752_14822911
transcript_39168.known	chr12	-	1174	6	FSM	ENSG00000111348.9	ENST00000228945.9	1174	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.22710574513201	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTGGCTGAGACCTT	-7	True	NA	-21	True	AATAAA	-13	NA	14961601	14942030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_14942722_14944775_14944840_14947872_14947950_14949801_14949886_14950531_14950725_14961536
transcript_39169.known	chr12	+	2095	9	FSM	ENSG00000151490.15	ENST00000543886.6	2095	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.3418742493994	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTGTTAGTTCATTT	22	False	NA	NA	False	TATAAA	-22	NA	15322521	15517067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15322802_15483973_15484248_15497244_15497404_15499441_15499595_15501619_15502064_15503907_15504070_15508570_15508768_15515497_15515619_15516762
transcript_39170.known	chr12	-	3873	21	FSM	ENSG00000151491.14	ENST00000644374.1	3873	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	5.62227711874824	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTTTCTGTCTCATT	-3	True	NA	-19	True	AATAAA	-21	NA	15789388	15620161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
transcript_39175.known	chr12	+	1874	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	0	0	0	0	multi-exon	FALSE	canonical	3	2342	junction_5	133.778239201862	3126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	-9	True	NA	89	True	AATAAA	-18	NA	15882386	15903478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_39183.known	chr12	+	1698	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	834.669161629325	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	-5	True	NA	53	True	NA	NA	NA	15882390	15903442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_39189.known	chr12	+	676	2	FSM	ENSG00000023734.11	ENST00000539887.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	2797	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	NA	False	NA	89	True	AATAAA	-18	NA	15900898	15903478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15901013_15902916
transcript_39190.known	chr12	+	1644	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_4	28.8920404263873	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGAATCTCTCTAGTT	-18	True	NA	111	True	ATTAAA	-25	NA	15911331	16037381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_39191.known	chr12	+	854	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	169.353753656513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTTCCAGAAAAGTT	13	True	NA	-86	True	NA	NA	NA	15911362	16036751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
transcript_39196.known	chr12	+	406	4	FSM	ENSG00000008394.13	ENST00000543076.5	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	1581.02526510138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCTTACAGGTTGCT	-6	True	NA	NA	False	AATAGA	-37	NA	16347644	16363999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347711_16354230_16354271_16357604_16357700_16363794
transcript_39197.known	chr12	+	925	4	FSM	ENSG00000008394.13	ENST00000396210.8	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	203.960780543711	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	-6	True	NA	27	True	AATAAA	-16	NA	16347644	16364410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347711_16354230_16354379_16357604_16357700_16363794
transcript_39199.known	chr12	+	365	4	FSM	ENSG00000008394.13	ENST00000540126.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1697.77265851468	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTATTCCATTTCTT	19	False	NA	NA	False	NA	NA	NA	16347796	16363814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347899_16354230_16354379_16357604_16357700_16363794
transcript_39201.nic	chr12	+	833	3	NIC	ENSG00000008394.13	novel	925	4	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_1	1859	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGGTTTTATTTT	470	False	NA	26	True	AATAAA	-15	NA	16347587	16364409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_16347711_16357604_16357700_16363794
transcript_39202.known	chr12	+	551	2	FSM	ENSG00000008394.13	ENST00000537878.5	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATTTTCAGCTCTA	3	True	NA	NA	False	AAAACA	-19	NA	16347653	16354724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347711_16354230
transcript_39203.known	chr12	-	2403	5	FSM	ENSG00000048540.16	ENST00000453727.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	36.4648803645371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTCATGGTTAGGAG	3735	False	NA	NA	False	AAGAAA	-37	NA	16606440	16549374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16606338
transcript_39205.known	chr12	-	3393	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	19.4821855949366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGCACTTAATTGGC	-1	True	NA	0	True	AATAAA	-16	NA	16606162	16548371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
transcript_39209.known	chr12	+	4238	26	FSM	ENSG00000052126.15	ENST00000299275.10	4238	26	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_18	30.6594194335118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	4	True	NA	24	True	AATAAA	-17	NA	19129793	19376400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
transcript_39219.nic	chr12	+	1131	10	ISM	ENSG00000052126.15	ENST00000538714.5	6487	28	-198	99051	-135	8800	5prime_fragment	FALSE	canonical	3	313	junction_5	18.972364567548	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAAATGAGCAAAATTG	15	False	NA	NA	False	ATTAAA	-27	NA	19129597	19274617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515
transcript_39224.known	chr12	+	5099	9	FSM	ENSG00000139154.16	ENST00000398864.7	5099	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	37.3243804369209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGTAACACTGCAGT	-18	True	NA	NA	False	ATTAAA	-29	NA	19439673	19522239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
transcript_39225.known	chr12	+	5830	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	10.7133332910015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGACATTTTGCATTTG	-23	True	NA	NA	False	ATTAAA	-17	NA	19439491	19522227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
transcript_39230.known	chr12	-	2572	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	65.255055146879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGGATGTCCAATCT	44	True	NA	NA	False	NA	NA	NA	21501551	21469801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
transcript_39240.known	chr12	-	3745	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	0	0	0	multi-exon	TRUE	canonical	3	265	junction_14	30.2358923082066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-40	True	NA	-1	True	AATAAA	-23	NA	21501635	21468909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
transcript_39252.known	chr12	+	4075	12	FSM	ENSG00000121350.16	ENST00000240651.14	4075	12	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	6.79572057855664	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTTACTTTTTTTT	-9	True	NA	NA	False	AATAAA	-36	NA	21437654	21471250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_39256.known	chr12	+	562	6	FSM	ENSG00000111711.10	ENST00000542194.1	562	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	222.808796953801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATAAAGTCATTTGAAG	-7	True	NA	NA	False	TTTAAA	-11	NA	21501852	21515746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21507116_21507152_21508382_21508562_21512294_21512377_21515668
transcript_39257.known	chr12	+	1210	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	215.259842980524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAAACTTTTGTGG	22	True	NA	-6	True	NA	NA	NA	21501828	21516239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
transcript_39260.known	chr12	+	3253	5	FSM	ENSG00000111711.10	ENST00000229314.10	3253	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	60.2598539659697	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	-18	True	NA	NA	False	AATAAA	-37	NA	21501788	21518408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21508382_21508562_21512294_21512377_21515668
transcript_39264.known	chr12	+	700	4	FSM	ENSG00000111711.10	ENST00000545093.5	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	214.272412285545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCATCCATAGGCATTTG	10	True	NA	NA	False	NA	NA	NA	21501816	21516062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21512294_21512377_21515668
transcript_39265.known	chr12	+	813	3	FSM	ENSG00000111711.10	ENST00000535593.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	208.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATGGTTAAAATAAAAC	-26	True	NA	-14	True	ATTAAA	-45	NA	21501780	21516231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21512294_21512377_21515668
transcript_39269.known	chr12	-	1538	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_7	3915.96255011173	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	12	True	NA	-14	True	AATAAA	-19	NA	21657794	21635341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
transcript_3927.known	chr1	-	2371	6	FSM	ENSG00000117122.14	ENST00000490075.5	2371	6	0	0	0	0	multi-exon	FALSE	canonical	3	4186	junction_5	517.361382401122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	13	True	NA	NA	False	ATTAAA	-18	NA	16980621	16974501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16978315_16980586
transcript_39272.nic	chr12	-	796	6	ISM	ENSG00000111716.14	ENST00000350669.5	1303	8	0	3026	0	0	5prime_fragment	FALSE	canonical	3	10195	junction_1	998.70207769885	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGGTTGAAAGGTAAG	-2	True	NA	11	True	NA	NA	NA	21657842	21638367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
transcript_39274.known	chr12	-	2274	3	FSM	ENSG00000121361.5	ENST00000240662.3	2274	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTAGTTTTGTGATT	3	True	NA	NA	False	ATTAAA	-15	NA	21774706	21764954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21766624_21773242_21773687_21774545
transcript_39276.known	chr12	-	9707	5	FSM	ENSG00000111728.11	ENST00000396037.9	9707	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	3.03108891324554	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAAGTCTTTTCATT	-8	True	NA	-7	True	AATAAA	-14	NA	22334707	22193390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_22202039_22249005_22249099_22255279_22255390_22287148_22287294_22333996
transcript_39278.known	chr12	+	1748	8	FSM	ENSG00000111726.13	ENST00000229329.7	1748	8	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_3	84.2493868444956	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGCCTTGTTGCTC	-7	True	NA	20	True	AATAAA	-21	NA	22046217	22065668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280_22061453_22062280_22062435_22065120
transcript_39279.known	chr12	+	1575	7	FSM	ENSG00000111726.13	ENST00000534981.5	1575	7	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_5	388.465642696437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTGCTCTAGAAG	0	True	NA	26	True	AATAAA	-27	NA	22046224	22065674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22062280_22062435_22065120
transcript_39280.nic	chr12	+	1022	6	ISM	ENSG00000111726.13	ENST00000229329.7	1748	8	-38	4278	-38	484	5prime_fragment	FALSE	canonical	3	909	junction_3	99.0405977364838	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATCTTATGATGTAAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	22046179	22061390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280
transcript_39283.known	chr12	-	4585	27	FSM	ENSG00000111731.13	ENST00000446597.6	4585	27	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	43.0623601757419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-31	True	NA	-35	True	AATAAA	-18	NA	22544542	22448582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_39286.known	chr12	-	4436	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_17	19.7102271817337	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-35	True	NA	-35	True	AATAAA	-18	NA	22544546	22448582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_39320.known	chr12	+	647	5	FSM	ENSG00000256995.8	ENST00000536744.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	21.3702480097916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTATGGTATTCTGT	-2	True	NA	NA	False	AATAAA	-21	NA	22699940	22888933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_22700095_22787559_22787721_22861068_22861225_22887963_22888045_22888838
transcript_39322.nic	chr12	+	791	2	ISM	ENSG00000256995.8	ENST00000629824.2	382	4	-139	179747	-44	-23074	5prime_fragment	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAAGTATTGGCACAAG	3623	False	NA	NA	False	AAAAAG	-10	NA	22699814	22709166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_22700095_22708655
transcript_39330.known	chr12	-	1811	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_10	200.0416206693	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATATCTGTTTTCTTC	9	True	NA	NA	False	NA	NA	NA	24903075	24817480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
transcript_39331.known	chr12	-	9314	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_7	58.9882191628125	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGACTGTTTGTATCC	-37	True	NA	-7	True	AATAAA	-16	NA	24949101	24810023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_39337.known	chr12	-	1360	10	FSM	ENSG00000060982.15	ENST00000539780.5	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	208.745695601367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAACTTACCTTAC	21	True	NA	5	True	AATGAA	-32	NA	24949043	24817808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24901813_24901886_24948926
transcript_39353.known	chr12	-	521	2	FSM	ENSG00000060982.15	ENST00000355164.3	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAATGTTCCTACTGT	3	True	NA	NA	False	NA	NA	NA	24949061	24945430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24945817_24948926
transcript_39354.known	chr12	-	4694	11	FSM	ENSG00000060982.15	ENST00000538118.5	4694	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	207.508288991067	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGAGGCAGAGGCAGG	-13	True	NA	25	True	AAGAAA	-30	NA	24902296	24814802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24901962
transcript_39355.known	chr12	-	5430	6	FSM	ENSG00000133703.14	ENST00000256078.10	5430	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	305.011868621534	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-15	True	NA	-4	True	AATAAA	-16	NA	25250929	25205245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25209912_25215436_25215561_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_39356.known	chr12	-	5306	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	52.6515669282501	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-15	True	NA	-4	True	AATAAA	-16	NA	25250929	25205245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_39360.known	chr12	+	1242	3	FSM	ENSG00000205707.11	ENST00000381356.9	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	1.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTCACTGGTATAC	-3	True	NA	138	True	AATAAA	-22	NA	25195236	25205143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_25195338_25203919_25204008_25204090
transcript_39366.known	chr12	-	1583	6	FSM	ENSG00000246695.9	ENST00000665934.1	1583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.6803068323894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGACTCTGTCTCAAAA	1568	False	NA	NA	False	NA	NA	NA	25958195	25945181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25946136_25947518_25947623_25955137_25955242_25956226_25956348_25956638_25956762_25958018
transcript_39368.known	chr12	-	2610	7	FSM	ENSG00000246695.9	ENST00000500276.6	2610	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	28.2370914460632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAGTGTATATATGTG	1185	False	NA	-11	True	AATAAA	-15	NA	25958578	25944856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25946136_25947518_25947623_25952757_25953077_25955137_25955242_25956226_25956348_25956638_25956762_25958018
transcript_39370.known	chr12	-	815	4	FSM	ENSG00000246695.9	ENST00000542086.5	815	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	31.8852107828483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAATAAATTATGGACTT	698	False	NA	-46	True	AATGAA	-31	NA	25959065	25954804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958931
transcript_39371.known	chr12	-	3560	4	FSM	ENSG00000246695.9	ENST00000670839.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	17.326921891156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCACCTTTGCACTCT	1222	False	NA	NA	False	NA	NA	NA	25958541	25952448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958018
transcript_39373.known	chr12	-	2999	4	FSM	ENSG00000246695.9	ENST00000663256.1	2999	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	29.5334085777823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCGCACCTG	1	True	NA	NA	False	AATACA	-12	NA	25959379	25952540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25959325
transcript_39374.known	chr12	-	1121	4	FSM	ENSG00000246695.9	ENST00000535436.6	1272	4	0	151	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	32.355662392986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGGAATAAATTATGGA	-2	True	NA	-49	True	AATGAA	-28	NA	25959765	25954807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956765_25959325
transcript_39375.known	chr12	+	4348	3	FSM	ENSG00000123096.12	ENST00000422622.3	4348	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGACGTGCTTTAAA	-6	True	NA	13	True	AATAAA	-23	NA	26195339	26234779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26195532_26224292_26224380_26230710
transcript_39383.known	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_15	22.916884468662	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	17	True	NA	-19	True	AATAAA	-27	NA	26937981	26905180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_39393.nic	chr12	-	2253	14	ISM	ENSG00000064102.15	ENST00000261191.12	2634	17	-340	8365	5	474	5prime_fragment	FALSE	canonical	3	342	junction_12	20.499675275246	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAGGAAGAAAGAGGGAAGA	-27	True	NA	-48	True	AAGAAA	-1	NA	26938321	26913545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_39398.known	chr12	+	2932	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	54.2107512911928	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	-4	True	NA	10	True	ATTAAA	-20	NA	26938469	26966648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
transcript_39402.known	chr12	+	2790	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	46.5978540278412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	-8	True	NA	12	True	ATTAAA	-22	NA	26938499	26966650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
transcript_39407.known	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	37.7458607002145	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	-11	True	NA	NA	False	NA	NA	NA	26938496	26960846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
transcript_39409.known	chr12	-	4315	12	FSM	ENSG00000064115.11	ENST00000343028.9	4315	12	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	39.3937529133115	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTAAAAAGCCTCATTAAA	-30	True	NA	-5	True	AATAAA	-19	NA	27014384	26971578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
transcript_39419.nic	chr12	-	2605	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	10	920	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	115.726228660576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTTCTTACTAAAAGC	NA	False	NA	NA	False	ATTAAA	-12	NA	27014424	26973175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
transcript_39422.nic	chr12	-	2094	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	-7	444	combination_of_known_junctions	FALSE	canonical	3	38	junction_10	122.562473865372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTTCTGCAGAGCAC	-37	True	NA	-18	True	ATTAAA	-25	NA	27014391	26973651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27014077
transcript_39427.nic	chr12	-	2129	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	10	444	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	115.726228660576	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTTCTGCAGAGCAC	NA	False	NA	-18	True	ATTAAA	-25	NA	27014424	26973651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
transcript_39447.nic	chr12	-	1858	9	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	7	444	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	138.009001065148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTTCTGCAGAGCAC	NA	False	NA	-18	True	ATTAAA	-25	NA	27014427	26973651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_27014077
transcript_39453.known	chr12	+	2669	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	29.8923996285938	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	-7	True	NA	20	True	ATTAAA	-22	NA	27022557	27030673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
transcript_39458.known	chr12	+	1374	3	FSM	ENSG00000152944.9	ENST00000536503.5	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	260.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATGCTGAGCTACAT	-15	True	NA	NA	False	GGGGCT	-9	NA	27022549	27029485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27022622_27027346_27027448_27028284
transcript_39460.known	chr12	+	1861	1	FSM	ENSG00000275764.1	ENST00000620519.1	1861	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTTTGGGAGGCT	NA	False	NA	17	True	AATAAA	-26	NA	27037099	27038960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27037100_27039000
transcript_39468.known	chr12	+	4957	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	0	0	0	0	multi-exon	FALSE	canonical	1	193	junction_7	91.4886742432794	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	13	True	NA	14	True	AATAAA	-17	NA	27244285	27325959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
transcript_39474.known	chr12	+	581	3	FSM	ENSG00000211455.8	ENST00000539863.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTCTAGTTCAGTGC	-6	True	NA	NA	False	TTTAAA	-6	NA	27244266	27302506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27244333_27297709_27297855_27302136
transcript_39475.known	chr12	+	1888	16	FSM	ENSG00000029153.15	ENST00000311001.9	1888	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	15.8234706124233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGATTTTTAACTCCAAA	93	False	NA	-39	True	NA	NA	NA	27333054	27420533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27333104_27368261_27368413_27370128_27370231_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
transcript_39479.known	chr12	+	1843	15	FSM	ENSG00000029153.15	ENST00000261178.9	1843	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	5.61521257343816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTCAACTATTCTTAAG	93	False	NA	18	True	TTTAAA	-20	NA	27333054	27420590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
transcript_39482.known	chr12	+	1954	15	FSM	ENSG00000029153.15	ENST00000395901.6	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	13.8027282130182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGATTTTTAACTCCAAA	7	True	NA	-39	True	NA	NA	NA	27332919	27420533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27333137_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
transcript_39486.known	chr12	+	3208	28	FSM	ENSG00000110841.14	ENST00000542629.5	3208	28	0	0	0	0	multi-exon	TRUE	canonical	2	48	junction_11	31.0393793865524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGCACCTGGATGAACA	36	False	NA	NA	False	NA	NA	NA	27524223	27692882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883_27660946_27664361_27664438_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
transcript_39492.nic	chr12	+	1097	9	ISM	ENSG00000110841.14	ENST00000545381.5	1191	10	-16	2195	-16	-470	5prime_fragment	FALSE	canonical	2	113	junction_4	36.2318920289846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATCTGAAGTAAAAAGGC	NA	False	NA	NA	False	AAGAAA	-2	NA	27524125	27656653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615
transcript_39493.nic	chr12	+	1174	9	ISM	ENSG00000110841.14	ENST00000545381.5	1191	10	-16	2118	-16	-393	5prime_fragment	FALSE	canonical	2	113	junction_4	36.2318920289846	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAGATATATTTCACA	NA	False	NA	NA	False	NA	NA	NA	27524125	27656730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615
transcript_39496.known	chr12	+	875	6	FSM	ENSG00000110841.14	ENST00000535047.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	2	113	junction_4	43.4695295580709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTAGTAGAGTCTCA	32	True	NA	NA	False	ATTAAA	-10	NA	27524219	27647977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728
transcript_39498.known	chr12	+	2805	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	35.7988205888903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAGTTGTTTTAAAT	-30	True	NA	NA	False	GATAAA	-20	NA	27524157	27637319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
transcript_39499.known	chr12	+	1191	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	52.654006917275	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	1	False	NA	NA	False	AAAAAG	-17	NA	27524141	27658848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
transcript_39502.known	chr12	+	1829	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	43.54261342264	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	11	True	NA	NA	False	AATAAA	-17	NA	27710831	27756295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
transcript_39503.known	chr12	+	1894	4	FSM	ENSG00000087448.11	ENST00000539176.1	1894	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	33.7671766990109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACATGACTGAATTGAA	166	False	NA	-6	True	AATAAA	-3	NA	27780047	27798156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27781203_27791707_27791902_27797246_27797350_27797714
transcript_39505.known	chr12	+	6490	3	FSM	ENSG00000087448.11	ENST00000381271.7	6490	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	12.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTATCTAAGTTCT	-33	True	NA	10	True	AATAAA	-15	NA	27780232	27803040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27781203_27791707_27791902_27797714
transcript_3951.known	chr1	-	3681	27	FSM	ENSG00000159363.19	ENST00000341676.9	3681	27	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	143.53409693257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	13	True	NA	-9	True	AATAAA	-20	NA	17011915	16985957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16986359_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004706_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
transcript_39510.known	chr12	+	772	2	FSM	ENSG00000087448.11	ENST00000543254.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTATCTCTTTTTTTT	601	False	NA	NA	False	NA	NA	NA	27780866	27792143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27781203_27791707
transcript_39518.nic	chr12	+	2557	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-39	1	-10	0	multi-exon	FALSE	canonical	3	64	junction_1	24.6570927366189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTACTTTTTGT	NA	False	NA	15	True	AATAAA	-17	NA	28190416	28550165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_3952.known	chr1	-	1015	8	FSM	ENSG00000117118.10	ENST00000375499.8	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_4	37.320454532744	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTTCCTTTACTTGC	-2	True	NA	18	True	AATAAA	-31	NA	17054032	17018721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17018959_17022607_17022731_17023972_17024075_17027748_17027866_17028599_17028737_17033059_17033146_17044760_17044889_17053947
transcript_39521.known	chr12	+	1301	11	ISM	ENSG00000123106.11	ENST00000536442.6	2519	13	-18	97530	-6	-4	5prime_fragment	FALSE	canonical	3	64	junction_1	25.8203408188196	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAATAAGTCAGGT	-19	True	NA	NA	False	AAAAAG	-33	NA	28190437	28452636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_39523.known	chr12	+	2440	12	FSM	ENSG00000123106.11	ENST00000539107.5	2440	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	40.1208916951409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	1	True	NA	16	True	AATAAA	-18	NA	28190426	28550166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_39531.nic	chr12	+	2200	13	FSM	ENSG00000064763.12	ENST00000686419.1	2115	13	-76	-9	7	9	multi-exon	FALSE	canonical	3	7	junction_12	43.2473505932252	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTCCTTCAATCGGG	22	False	NA	NA	False	ATTAAA	-27	NA	29149056	29341130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631_29333735_29340807
transcript_39534.known	chr12	+	3538	12	FSM	ENSG00000064763.12	ENST00000536681.8	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_6	19.7488361410393	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTCTTCTAGTGTTGT	11	True	NA	9	True	AATAAA	-18	NA	29149277	29335616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631
transcript_39540.known	chr12	-	5033	14	FSM	ENSG00000087502.19	ENST00000360150.9	5033	14	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_4	45.7592102799402	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTCTTTTTAATA	-5	True	NA	-1	True	AATAAA	-16	NA	29381172	29337351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_29341219_29341733_29341817_29343119_29343283_29345442_29345541_29349078_29349178_29350012_29350069_29356381_29356478_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
transcript_39545.known	chr12	-	4228	20	FSM	ENSG00000133687.16	ENST00000551659.5	4228	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	16.10921864051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACACACTCTTCTTTTTT	861	False	NA	NA	False	TATAAA	-15	NA	29783897	29505598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29659879_29659984_29660803_29660886_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
transcript_39547.known	chr12	-	8846	18	FSM	ENSG00000133687.16	ENST00000539277.6	8846	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	22.6718733418844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTGGTTTCAATCTC	-17	True	NA	-26	True	ATTAAA	-43	NA	29783942	29500839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
transcript_39553.known	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	25.7859444379211	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	11	True	NA	-11	True	AATAAA	-21	NA	30695869	30628987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_39563.nic	chr12	-	2274	14	NIC	ENSG00000110888.18	novel	2187	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	34.2735255877334	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTATTCACCTGGCTA	NA	False	NA	NA	False	AATAAA	-5	NA	30754962	30716622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
transcript_39572.nic	chr12	-	405	2	ISM	ENSG00000110888.18	ENST00000540436.5	557	5	-74	18213	-11	-18191	5prime_fragment	FALSE	canonical	3	49	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAACATCGAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30754962	30753366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_30753560_30754750
transcript_39573.known	chr12	+	5506	8	FSM	ENSG00000110900.16	ENST00000546076.6	5506	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	3.4166459266004	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTCTGTTGAATTTTT	8	True	NA	5	True	AATAAA	-17	NA	30926747	30996599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_30926797_30953980_30954076_30963825_30964018_30978560_30978636_30979565_30979671_30982531_30982691_30983063_30983151_30991855
transcript_39581.known	chr12	-	2031	3	FSM	ENSG00000245614.5	ENST00000500527.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTTTATAGTTTG	NA	False	NA	-1	True	AATAAA	-23	NA	31073847	31020762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31022030_31060659_31060771_31073194
transcript_39583.known	chr12	-	494	2	FSM	ENSG00000245614.5	ENST00000618041.2	810	2	305	11	279	-11	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGGCCACCTATCTTC	280	False	NA	NA	False	ATTAAA	-13	NA	31073507	31060589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31060771_31073194
transcript_3959.known	chr1	-	828	3	FSM	ENSG00000117118.10	ENST00000466613.2	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAATGTATTCATTTTC	-1	True	NA	NA	False	NA	NA	NA	17054031	17032529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17033146_17044760_17044889_17053947
transcript_3960.known	chr1	-	4361	16	FSM	ENSG00000117115.13	ENST00000375486.9	4361	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	5.54576915815611	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTTGGTGTGATGT	0	True	NA	0	True	AATAAA	-19	NA	17119451	17066760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17069278_17070087_17070217_17071405_17071492_17074855_17074950_17075678_17075824_17079263_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
transcript_39605.known	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	61.0150820427736	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	-15	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_39611.known	chr12	+	3751	27	FSM	ENSG00000013573.17	ENST00000545668.5	3751	27	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	94.1489519215641	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	19	True	NA	15	True	AATAAA	-16	NA	31073893	31104791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31073970_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103321_31103396_31103576_31103732_31103806
transcript_39612.nic	chr12	+	3859	27	NIC	ENSG00000013573.17	novel	3717	27	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	79.6265321069844	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	3	False	NA	15	True	AATAAA	-16	NA	31073839	31104791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_31074092_31078462_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_39613.known	chr12	+	3717	27	FSM	ENSG00000013573.17	ENST00000228264.10	3717	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82.9570449194952	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	-15	True	NA	15	True	AATAAA	-16	NA	31073859	31104791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31073970_31078462_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_39614.nnic	chr12	+	4039	27	NNC	ENSG00000013573.17	novel	652	9	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.2514637289805	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	315	False	NA	15	True	AATAAA	-16	NA	31074189	31104791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_31074549_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_39626.nic	chr12	+	4009	26	ISM	ENSG00000013573.17	ENST00000542838.6	3920	27	-22	8	-22	0	intron_retention	FALSE	canonical	3	179	junction_1	61.6883262862594	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	1	False	NA	15	True	AATAAA	-16	NA	31073837	31104791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576
transcript_39627.known	chr12	+	3724	26	FSM	ENSG00000013573.17	ENST00000350437.8	3724	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_20	87.3732224425768	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	23	True	NA	15	True	AATAAA	-16	NA	31073897	31104791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_39629.known	chr12	+	3603	26	FSM	ENSG00000013573.17	ENST00000536265.5	3603	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	85.2494129012042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCGCAGGAGGCTGTGG	16	True	NA	NA	False	NA	NA	NA	31073890	31104136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101044_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_3965.known	chr1	-	1607	11	FSM	ENSG00000117115.13	ENST00000375481.1	1607	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	5.9464274989274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTGTATAATGAGATT	4146	False	NA	0	True	AATAAA	-20	NA	17119435	17079030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
transcript_3966.nnic	chr1	-	2902	5	NNC	ENSG00000117115.13	novel	4361	16	NA	NA	-249	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	4.84767985741633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTTGGTGTGATGT	NA	False	NA	0	True	AATAAA	-19	NA	17075600	17066760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_17069278_17070087_17070217_17071405_17071492_17074855_17074950_17075524
transcript_39697.known	chr12	+	879	5	FSM	ENSG00000013573.17	ENST00000535317.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	145.348503604268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGCGCCTGGTGAGCC	-4	True	NA	NA	False	NA	NA	NA	31074263	31084656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074328_31077944_31078289_31078389_31078538_31083812_31084062_31084582
transcript_3970.known	chr1	+	3189	16	FSM	ENSG00000142619.4	ENST00000375460.3	3189	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.33998341614945	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTCTCATGTTGA	1	True	NA	24	True	AATAAA	-17	NA	17249097	17284233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_17249230_17259577_17259759_17262132_17262206_17265658_17265721_17266718_17266837_17267836_17267963_17270232_17270412_17270878_17270983_17271066_17271179_17273339_17273448_17274634_17274787_17276518_17276664_17276773_17276877_17280349_17280430_17280670_17280797_17282845
transcript_39702.known	chr12	+	4182	27	FSM	ENSG00000013573.17	ENST00000435753.6	4182	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	127.749848018066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	1	True	NA	15	True	AATAAA	-16	NA	31073875	31104791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31086024_31086213_31087937_31087984_31089043_31089152_31089402_31089491_31089890_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31100998_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576
transcript_39709.nnic	chr12	-	3180	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	464	junction_5	1176.06259281648	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	-7	True	NA	-34	True	AATAAA	-24	NA	31326247	31280583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
transcript_39712.nnic	chr12	-	1076	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	464	junction_5	1176.06259281648	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAATATCTGA	-7	True	NA	NA	False	NA	NA	NA	31326247	31282687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
transcript_39716.known	chr12	-	1555	6	FSM	ENSG00000139146.14	ENST00000454658.6	1555	6	0	0	0	0	multi-exon	TRUE	canonical	3	136	junction_5	1168.61473548813	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCCTCATGATAATAAA	-5	True	NA	-55	True	NA	NA	NA	31324162	31282061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31323943
transcript_39718.known	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2685	junction_5	221.244118565895	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	0	True	NA	-34	True	AATAAA	-24	NA	31326150	31280583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
transcript_39728.known	chr12	-	1734	2	FSM	ENSG00000139146.14	ENST00000536836.1	1734	2	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTAACACC	-3	True	NA	NA	False	NA	NA	NA	31326128	31303494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31305124_31326023
transcript_39729.known	chr12	-	2532	3	FSM	ENSG00000139146.14	ENST00000539409.5	2532	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1425	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	9	True	NA	-34	True	AATAAA	-24	NA	31326116	31280583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31282872_31287633_31287785_31326023
transcript_39730.known	chr12	-	868	2	FSM	ENSG00000256232.1	ENST00000541749.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATACCTTAAGCTAAT	445	False	NA	-7	True	AATAAA	-17	NA	31369301	31363480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31363796_31368748
transcript_39736.known	chr12	-	1025	9	FSM	ENSG00000151743.11	ENST00000536761.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	54.799635035281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGCTTATCAAAACTAC	1	True	NA	NA	False	NA	NA	NA	31729021	31672277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_39737.known	chr12	-	1952	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	25.8886504519301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATCACATTTTCCCCTT	1	True	NA	-5	True	AATAAA	-25	NA	31729021	31671141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
transcript_39742.known	chr12	-	880	6	FSM	ENSG00000151743.11	ENST00000541931.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	41.0268204958659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTAGCTAAGTCTTG	-7	True	NA	-76	True	NA	NA	NA	31729110	31672169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31728970
transcript_39746.known	chr12	-	560	5	FSM	ENSG00000151743.11	ENST00000509386.2	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCCTGAGTAGTTGGG	3	True	NA	NA	False	NA	NA	NA	31729100	31709079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31709168_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_39748.known	chr12	+	2055	4	FSM	ENSG00000139160.13	ENST00000395763.7	2055	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGATGCTTGTT	7008	False	NA	NA	False	TTTAAA	-40	NA	31659186	31668967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31659363_31661840_31662268_31666086_31666218_31667646
transcript_39750.known	chr12	-	430	3	FSM	ENSG00000151743.11	ENST00000422146.6	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATCCGCCTCAGCCTC	7	True	NA	NA	False	NA	NA	NA	31729057	31708957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31709168_31709292_31709426_31728970
transcript_39752.known	chr12	+	2088	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTTTATGTAATTT	NA	False	NA	20	True	AATAAA	-21	NA	31729116	31731204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31729100_31731200
transcript_39753.known	chr12	+	6234	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	55.9464029227975	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	-1	True	NA	9	True	AATAAA	-23	NA	31959414	31993107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
transcript_39754.known	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	97.8749201787669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	22	False	NA	-33	True	NA	NA	NA	31959437	31992941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
transcript_39761.known	chr12	+	8811	9	FSM	ENSG00000151746.15	ENST00000548411.5	8811	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	29.4318598630803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCTGCCTTTTTATCA	193	False	NA	29	True	AATAAA	-24	NA	32107150	32383633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337707_32367669_32367746_32377539
transcript_39771.nic	chr12	+	3404	6	NIC	ENSG00000151746.15	novel	8811	9	NA	NA	-195	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	24.9158584038359	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	6307	False	NA	15	True	AATAAA	-22	NA	32106639	32333065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32332453
transcript_39772.nic	chr12	+	2821	6	ISM	ENSG00000151746.15	ENST00000395758.3	3194	10	-605	43372	-188	1486	5prime_fragment	FALSE	canonical	3	61	junction_5	14.1703916671347	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATGAAAATGAAAAAGCAAT	0	True	NA	NA	False	NA	NA	NA	32106646	32334551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515
transcript_39777.known	chr12	+	1328	2	FSM	ENSG00000151746.15	ENST00000550207.1	1328	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAATGTCTCTTTAGTTT	9	False	NA	NA	False	TATAAA	-25	NA	32106884	32108329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32107545_32107661
transcript_39778.known	chr12	+	1962	1	FSM	ENSG00000151746.15	ENST00000551848.1	1962	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAATCTAATTTTTGTG	23	True	NA	14	True	AATAAA	-28	NA	32106834	32108796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32106800_32108800
transcript_3978.known	chr1	-	4040	13	FSM	ENSG00000179051.14	ENST00000375436.9	4040	13	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_12	146.748367395802	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTTTGCATTTCTTTT	-7	True	NA	-15	True	AATAAA	-21	NA	17439677	17406759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17409195_17409973_17410052_17412121_17412195_17413072_17413179_17413536_17413718_17416479_17416647_17420713_17420829_17422202_17422292_17422704_17422837_17425540_17425685_17429105_17429200_17438229_17438523_17439544
transcript_39783.known	chr12	+	8465	17	FSM	ENSG00000139132.16	ENST00000534526.7	8465	17	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.3652062208139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTTTACATGTTA	12	True	NA	20	True	AATAAA	-17	NA	32399557	32646050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_39785.nic	chr12	+	2745	15	ISM	ENSG00000139132.16	ENST00000534526.7	8465	17	-208	12373	-208	-5252	5prime_fragment	FALSE	canonical	3	65	junction_1	10.4246567995189	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTTTAGAGGTAAGAAA	-12	True	NA	NA	False	AAGAAA	-12	NA	32399349	32633677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548
transcript_39786.known	chr12	+	2931	17	FSM	ENSG00000139132.16	ENST00000583694.2	2931	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.9764611288988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGAGCATTTTTTGA	15	True	NA	NA	False	GATAAA	-17	NA	32502159	32640739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32502339_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_39794.known	chr12	+	549	3	FSM	ENSG00000139132.16	ENST00000550091.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	31.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGGAGAAAGAGATGAAAC	-15	True	NA	NA	False	NA	NA	NA	32399855	32582251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32399960_32564136_32564290_32581959
transcript_39796.known	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_14	66.5023691078213	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	1	True	NA	NA	False	NA	NA	NA	32679300	32745650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_39802.known	chr12	+	2393	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	96.6620688561731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	20	True	NA	-23	True	TATAAA	-40	NA	32679319	32743581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_39808.known	chr12	+	4439	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_14	55.4817287241685	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	NA	False	NA	NA	False	AATAAA	-26	NA	32679199	32745552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_39815.known	chr12	+	3101	18	FSM	ENSG00000087470.19	ENST00000266481.10	3101	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	91.1636423613126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCATAGCTTCATACCA	3	True	NA	NA	False	NA	NA	NA	32679302	32744350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_3982.known	chr1	-	2030	12	FSM	ENSG00000179051.14	ENST00000375433.3	2030	12	0	0	0	0	multi-exon	FALSE	canonical	3	1375	junction_11	90.2028934318134	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATGTCCCTTACAGG	1	True	NA	NA	False	NA	NA	NA	17438561	17408675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17409195_17409973_17410052_17412121_17412195_17413072_17413179_17413536_17413718_17416479_17416647_17420713_17420829_17422202_17422292_17422704_17422837_17425540_17425685_17429105_17429200_17438229
transcript_39823.known	chr12	-	2117	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_4	8.1967981553775	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-7	True	NA	NA	False	NA	NA	NA	32755897	32746543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
transcript_39830.nic	chr12	+	377	2	ISM	ENSG00000087470.19	ENST00000550011.5	576	3	-97	4558	19	-4558	5prime_fragment	FALSE	canonical	3	400	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGGAGAAGAAAATGGT	NA	False	NA	NA	False	GATAAA	-8	NA	32679218	32701544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_32679466_32701414
transcript_39832.known	chr12	-	4229	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_8	21.0256126875982	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAAAGTAGTGTTGC	12	True	NA	-12	True	AATAAA	-26	NA	32896777	32790754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
transcript_39847.known	chr12	-	1563	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAATTCCAGGAAGAAA	188	False	NA	NA	False	NA	NA	NA	32896601	32893308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_32894779_32896508
transcript_39849.known	chr12	-	4461	7	FSM	ENSG00000110975.8	ENST00000228567.7	4461	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTTGATTCATTAGCATAA	-1	True	NA	NA	False	AAAAAG	-6	NA	33439819	33374237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_33376902_33379831_33379962_33382348_33382521_33385170_33385292_33406788_33407357_33426137_33426496_33439371
transcript_39851.nic	chr12	-	829	2	ISM	ENSG00000110975.8	ENST00000539102.1	2433	9	-359	50028	-186	-18503	5prime_fragment	FALSE	canonical	3	20	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGGAAAATGAAAAGCCA	NA	False	NA	NA	False	AAAAAG	-4	NA	33440005	33426300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_33426496_33439371
transcript_39852.known	chr12	+	2913	3	FSM	ENSG00000139133.7	ENST00000266483.7	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACATATTTTGTGAT	12	True	NA	9	True	AATAAA	-24	NA	34022495	34028302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_34022771_34023961_34024160_34025862
transcript_39854.known	chr12	-	3431	20	FSM	ENSG00000139117.14	ENST00000331366.10	3431	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	3.35936282047009	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTTGTCAAACATC	0	True	NA	-13	True	AATAAA	-15	NA	38905591	38652202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38685489_38685618_38693656_38693839_38702874_38702922_38723771_38723834_38724845_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_39855.known	chr12	-	6601	37	FSM	ENSG00000139116.19	ENST00000361961.7	6601	37	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	25.3479946609852	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTGTATTGTTCTT	197	False	NA	-3	True	AATAAA	-18	NA	39443390	39293228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39315228_39315241_39315931_39315971_39318072_39318202_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330241_39330263_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
transcript_39858.known	chr12	-	7221	10	FSM	ENSG00000151229.13	ENST00000280871.9	7221	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	8.62525719781127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTCCCTTGCACTTAT	-14	True	NA	-4	True	AATAAA	-23	NA	40106081	39755024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_39760253_39764459_39764613_39764736_39764859_39830102_39830229_39864761_39864883_39871797_39871962_39951256_39951366_40028300_40028510_40048050_40048211_40105252
transcript_39862.nic	chr12	-	2445	7	ISM	ENSG00000151229.13	ENST00000280871.9	7221	10	-32	74383	-24	0	5prime_fragment	FALSE	canonical	3	37	junction_4	6.99205898780101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	AAAAAG	-9	NA	40106113	39829407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_39830229_39864761_39864883_39871797_39871962_39951256_39951366_40028300_40028510_40048050_40048211_40105252
transcript_39869.known	chr12	+	3041	8	FSM	ENSG00000165966.16	ENST00000539469.6	3041	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.69030850945703	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAATAAATCATGTGCCAC	NA	False	NA	NA	False	AATACA	-19	NA	41437682	41574332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_41438014_41506455_41506713_41509810_41509914_41552655_41552755_41555697_41555761_41563547_41563650_41567782_41567900_41572363
transcript_39871.known	chr12	-	7492	8	FSM	ENSG00000151233.11	ENST00000398675.8	7492	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	31.6305200070813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	12	True	NA	NA	False	AATAAA	-33	NA	42144874	42081844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42129758_42129852_42144425
transcript_39872.known	chr12	-	1937	7	FSM	ENSG00000151233.11	ENST00000280876.6	1937	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	13.6065752079239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTGTGTGCGTGTTTG	-11	True	NA	-88	True	NA	NA	NA	42144712	42087144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42144425
transcript_39874.known	chr12	-	571	5	FSM	ENSG00000015153.15	ENST00000547254.5	571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.753520777581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTGGTTGCACAGCAG	1	True	NA	NA	False	TTTAAA	-45	NA	42238349	42161748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42161766_42210354_42210455_42210547_42210681_42237598_42237725_42238154
transcript_39875.known	chr12	-	4096	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATTC	-13	True	NA	NA	False	AATAAA	-18	NA	42238248	42157103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
transcript_39877.nic	chr12	-	403	3	ISM	ENSG00000015153.15	ENST00000534854.7	4096	4	-116	4595	-15	0	5prime_fragment	FALSE	canonical	3	41	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAGAAAGAGAAAAAAGA	-14	True	NA	NA	False	NA	NA	NA	42238364	42161698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_42161766_42237598_42237725_42238154
transcript_39882.known	chr12	+	3377	12	FSM	ENSG00000134283.18	ENST00000432191.6	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	169.930710235059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	14	True	NA	13	True	AATAAA	-15	NA	42326177	42448618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
transcript_39885.known	chr12	+	1693	11	FSM	ENSG00000134283.18	ENST00000395580.7	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	165.454041957276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	NA	False	NA	24	True	AATAAA	-15	NA	42326144	42441950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_39887.known	chr12	+	1859	10	FSM	ENSG00000134283.18	ENST00000358314.12	1859	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	130.373821503143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	3	True	NA	NA	False	AATAAA	-34	NA	42326166	42442181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_39889.known	chr12	+	1863	10	FSM	ENSG00000134283.18	ENST00000613154.4	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	153.485994857133	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	-15	True	NA	NA	False	AATAAA	-34	NA	42326148	42442181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_39891.known	chr12	+	1583	9	FSM	ENSG00000134283.18	ENST00000449194.6	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	63.0114076973368	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	4	True	NA	37	True	AATAAA	-28	NA	42326167	42441963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_39896.nic	chr12	+	1467	9	ISM	ENSG00000134283.18	ENST00000337898.10	1465	11	18	3496	0	0	5prime_fragment	FALSE	canonical	3	122	junction_4	147.406697185033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	-1	True	NA	24	True	AATAAA	-15	NA	42326162	42441950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_39899.nic	chr12	+	1008	8	NIC	ENSG00000134283.18	novel	1095	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	93.9611296098074	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAAAAATTTTTTTTC	-6	True	NA	50	True	AAAACA	-1	NA	42326157	42441543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_39900.nic	chr12	+	1425	8	NIC	ENSG00000134283.18	novel	1693	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	93.9611296098074	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	-16	True	NA	24	True	AATAAA	-15	NA	42326147	42441950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_39907.known	chr12	+	847	4	FSM	ENSG00000134283.18	ENST00000549774.5	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	40.2326567189723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGGTTGCAGTGAGC	-6	True	NA	-61	True	NA	NA	NA	42326157	42355678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160
transcript_39908.known	chr12	-	1808	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_3	36.5155823601657	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATCTTGTGTTTCC	9	True	NA	NA	False	ATTAAA	-19	NA	42326094	42312085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_39910.known	chr12	-	907	8	FSM	ENSG00000139168.9	ENST00000552673.5	907	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	197.623637353471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTATTTGAAAAGTTC	16	True	NA	27	True	AAAAAG	-9	NA	42326087	42312930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324067_42324105_42325923
transcript_39912.known	chr12	-	1199	8	FSM	ENSG00000139168.9	ENST00000552235.2	1199	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	194.961429989815	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTTTAAATATGG	NA	False	NA	-16	True	AATAAA	-12	NA	42326147	42312780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42313232_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_39915.known	chr12	-	3778	9	FSM	ENSG00000139174.12	ENST00000640055.1	3778	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	48.7338114146636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAATATATGGTAAAAACA	17	False	NA	NA	False	TATAAA	-33	NA	42484298	42458824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472562_42483757_42483986_42484273
transcript_39919.known	chr12	-	4278	8	FSM	ENSG00000139174.12	ENST00000640132.1	4278	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	43.326006706629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAATAAATAACAAAACTA	643	False	NA	NA	False	AATAAA	-3	NA	42483672	42458371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483375
transcript_39920.known	chr12	-	5761	8	FSM	ENSG00000139174.12	ENST00000639589.1	5761	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	33.8990096779074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTTAGTCTATTCTC	NA	False	NA	-9	True	AATAAA	-10	NA	42484444	42456762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42484273
transcript_39930.known	chr12	-	3311	8	FSM	ENSG00000139174.12	ENST00000552240.6	3311	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	20.7256126666539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTACAGATTGAAAAAAAA	320	False	42484008	NA	False	NA	NA	NA	42483995	42459279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757
transcript_39931.known	chr12	-	4364	9	FSM	ENSG00000129317.15	ENST00000416848.6	4364	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	13.683361246419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	14	True	NA	-11	True	AATAAA	-20	NA	43758758	43728606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758285
transcript_39932.known	chr12	-	13567	9	FSM	ENSG00000129317.15	ENST00000344862.10	13567	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	10.1242283656583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	-18	True	NA	39	True	AATAAA	-15	NA	43758790	43718991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758729
transcript_39936.known	chr12	-	1149	4	FSM	ENSG00000129317.15	ENST00000553166.1	1149	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	12.4721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAATGAATGT	5	True	NA	14	True	AAAAAG	-6	NA	43758767	43746213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43746239_43748449_43748610_43754335_43755262_43758729
transcript_39943.nic	chr12	-	1174	3	ISM	ENSG00000129317.15	ENST00000551923.5	3313	9	-13	19190	4	-2234	5prime_fragment	FALSE	canonical	2	5	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGATATTAAGAAATTT	-14	True	NA	NA	False	NA	NA	NA	43758786	43748447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_43748610_43754335_43755262_43758700
transcript_39944.nic	chr12	-	1233	3	ISM	ENSG00000129317.15	ENST00000553166.1	1149	4	-107	2234	-81	-2234	5prime_fragment	FALSE	canonical	3	24	junction_2	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGATATTAAGAAATTT	NA	False	NA	NA	False	NA	NA	NA	43758874	43748447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_43748610_43754335_43755262_43758729
transcript_3995.known	chr1	+	4625	29	FSM	ENSG00000074964.17	ENST00000361221.8	4625	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	77.8495409132781	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATTGAGGTTTTGTTG	-25	True	NA	19	True	AATAAA	-21	NA	17539697	17697869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17613057_17613175_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634547_17634563_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
transcript_39950.known	chr12	-	3313	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	14.1901153976985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAAGCTATATG	-1	True	NA	19	True	AATAAA	-9	NA	43758773	43729257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
transcript_39951.known	chr12	+	4284	12	FSM	ENSG00000198001.15	ENST00000613694.5	4284	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.65812124494566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGCTTTAATTTTT	-24	True	NA	6	True	ATTAAA	-16	NA	43758950	43789541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_43759017_43768102_43768273_43771219_43771366_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_39953.known	chr12	+	1348	11	FSM	ENSG00000198001.15	ENST00000550615.5	1348	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.21369455316239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATCTCAACCATTTTT	-25	True	NA	NA	False	NA	NA	NA	43758949	43786750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_43759017_43768102_43768273_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_39956.known	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	8.30662386291807	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	4	True	NA	-2	True	AATAAA	-17	NA	43806317	43793722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_39958.known	chr12	-	455	2	FSM	ENSG00000151239.14	ENST00000547961.1	455	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTTGTGAATTATTCAA	360	False	NA	NA	False	ACTAAA	-27	NA	43806255	43804152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43804573_43806220
transcript_39959.known	chr12	+	2775	8	FSM	ENSG00000139173.10	ENST00000266534.8	2775	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.87139303460597	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTATGTGATGTAGTTT	2	True	NA	4	True	AATAAA	-17	NA	43836080	44389758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_43836197_43844623_43844929_43944209_43944343_44143524_44143625_44211289_44211388_44299579_44299740_44376594_44376725_44388025
transcript_39960.known	chr12	-	3196	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	36.7843376996243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACATGTGAGTCTGAG	845	False	44876373	-12	True	AATAAA	-16	NA	44876355	44508281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
transcript_39963.known	chr12	-	3553	20	FSM	ENSG00000184613.11	ENST00000429094.7	3553	20	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	19.5107754871713	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTGAGTCTGAGTATC	12	True	NA	-8	True	AATAAA	-20	NA	44876315	44508277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
transcript_39969.known	chr12	-	1938	13	FSM	ENSG00000184613.11	ENST00000547751.5	1938	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	22.4623141184419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTAAAAATTTCTTTGA	12	True	NA	-11	True	AATAAA	-22	NA	44876315	44665435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
transcript_3997.nic	chr1	+	4414	28	NIC	ENSG00000074964.17	novel	4625	29	NA	NA	94	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	65.0426471890618	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATTGAGGTTTTGTTG	69	False	NA	19	True	AATAAA	-21	NA	17539791	17697869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634547_17634563_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
transcript_39970.known	chr12	+	5998	20	FSM	ENSG00000177119.17	ENST00000320560.13	5998	20	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_19	79.0322000368159	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGTCTATTCTATAT	3	True	NA	24	True	AATAAA	-18	NA	45216094	45432349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
transcript_39971.known	chr12	+	5661	19	FSM	ENSG00000177119.17	ENST00000681817.1	5661	19	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_18	90.3489975485323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTAATAAATTCATTT	188	False	NA	-6	True	NA	NA	NA	45216321	45432319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
transcript_39973.known	chr12	+	2780	18	FSM	ENSG00000177119.17	ENST00000426898.2	2780	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	100.176764187335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAAGCAAGGGAAA	-6	True	NA	NA	False	NA	NA	NA	45215986	45421217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45383194_45383356_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070
transcript_39977.known	chr12	-	277	3	FSM	ENSG00000134297.7	ENST00000545609.3	876	3	-17	616	0	-393	multi-exon	FALSE	canonical	0	0	junction_1	26	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGGTGATCGGACCTA	NA	False	NA	NA	False	NA	NA	NA	45216041	45176426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45176434_45190793_45190962_45215939
transcript_39978.known	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	14	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	2	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45174643_45176240_45176434_45215939
transcript_39982.known	chr12	-	487	2	FSM	ENSG00000134297.7	ENST00000550498.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTTTTATGCCCTGGGC	-18	True	NA	NA	False	NA	NA	NA	45216026	45176033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45176434_45215939
transcript_39985.known	chr12	+	8598	21	FSM	ENSG00000189079.17	ENST00000334344.11	8598	21	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	20.7663188841932	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTGGATAAGTGAC	0	True	NA	16	True	AATAAA	-17	NA	45729705	45908037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417_45811552_45817669_45817889_45821419_45821488_45836588_45836656_45836740_45836992_45837320_45837418_45837497_45837708_45839328_45839497_45846855_45846938_45848835_45848971_45849579_45849777_45850035_45852897_45860800_45860950_45891779_45891919_45892010_45892097_45893419_45893544_45893629_45893722_45904933
transcript_39987.known	chr12	-	7552	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	0	0	0	multi-exon	FALSE	canonical	2	107	junction_2	69.3641676595491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	-7	True	NA	30	True	AATAAA	-18	NA	45990574	45919130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_39990.nic	chr12	-	3308	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-80	7585	-70	0	5prime_fragment	FALSE	canonical	3	228	junction_1	43.6605084716154	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGAAAAGAAAAAAATGA	1403	False	NA	15	True	AATGAA	-4	NA	45990654	45926715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_39992.known	chr12	-	1931	4	FSM	ENSG00000139218.18	ENST00000395454.6	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	163.813579684008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGCACGGTGATACATG	1473	False	NA	NA	False	AAAAAG	-25	NA	45990584	45954733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45956193_45961699_45961858_45964106_45964189_45990352
transcript_39993.known	chr12	-	1336	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	149.760549619124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-13	True	NA	-9	True	AATAAA	-20	NA	45990580	45960454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
transcript_39996.known	chr12	-	3436	18	FSM	ENSG00000111371.16	ENST00000439706.5	3436	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	249.915224380514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	23	True	NA	6	True	NA	NA	NA	46268997	46187800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46254813_46254937_46268525
transcript_4.known	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00009_+_0_1000
transcript_40.known	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00111_+_0_1000
transcript_4000.known	chr1	+	1841	3	FSM	ENSG00000117148.8	ENST00000375406.2	1841	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	-16	True	NA	7	True	AATAAA	-19	NA	17755332	17827063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_17755505_17822984_17823357_17825766
transcript_40000.known	chr12	-	8097	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_16	128.819095537114	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGTGTTTGT	1005	False	46269065	-11	True	ATTAAA	-19	NA	46269043	46183062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
transcript_40005.known	chr12	-	3196	16	FSM	ENSG00000111371.16	ENST00000549049.5	3196	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	200.648238356472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	25	True	NA	6	True	NA	NA	NA	46268995	46187800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46268525
transcript_40014.known	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	TRUE	canonical	3	903	junction_13	74.507151036364	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	1	True	NA	-11	True	AATAAA	-18	NA	46372773	46358187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
transcript_40017.known	chr12	-	4384	15	FSM	ENSG00000134294.14	ENST00000549258.5	4384	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	270.201408250231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGTACAAATTCAGA	3	True	NA	-12	True	AATAAA	-22	NA	46372771	46358480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370775_46370858_46371177_46371380_46372508
transcript_40024.nnic	chr12	-	3840	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	8.41321711488668	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	NA	False	NA	-4	True	AATAAA	-18	NA	46832470	46764760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
transcript_40027.known	chr12	+	476	3	FSM	ENSG00000179715.13	ENST00000551777.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTGGTGGACGGAGGC	1	True	NA	NA	False	NA	NA	NA	47223544	47235238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47223673_47223923_47224040_47235006
transcript_40028.known	chr12	+	732	2	FSM	ENSG00000179715.13	ENST00000549630.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGAAGTCACCGGGG	2138	False	NA	NA	False	NA	NA	NA	47223500	47235566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47223673_47235006
transcript_40029.known	chr12	+	1862	3	FSM	ENSG00000179715.13	ENST00000432328.2	1862	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGGGTTTTGCATGTG	-18	True	NA	16	True	AATAAA	-28	NA	47079602	47236662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47079726_47104112_47104196_47235006
transcript_40030.known	chr12	-	3224	3	FSM	ENSG00000139211.7	ENST00000550413.2	3224	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAAGTTGATTTTTTT	-10	True	NA	4	True	TATAAA	-31	NA	47079959	47076446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47079066_47079141_47079249_47079461
transcript_40031.known	chr12	-	3763	2	FSM	ENSG00000139211.7	ENST00000266581.4	3763	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTTCTGTGAACAAAT	-1	True	NA	NA	False	NA	NA	NA	47079865	47075706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47079066_47079461
transcript_40034.known	chr12	-	3058	3	FSM	ENSG00000139211.7	ENST00000429635.1	3058	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACATTTGAATTAAT	-2	True	NA	-5	True	ATTAAA	-20	NA	47079951	47076599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47079066_47079146_47079249_47079461
transcript_40036.known	chr12	-	4339	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_11	27.4214075814864	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCGTATACAACCTATTG	-14	True	NA	NA	False	AATAAA	-21	NA	47706030	47661248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_40037.known	chr12	-	2149	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	83.6116950883999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATTTGTAAGGATCAG	9009	False	NA	-15	True	AATAAA	-15	NA	47705986	47663292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_40043.known	chr12	-	621	3	FSM	ENSG00000005175.10	ENST00000551293.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTTATCCAGTGTG	17	True	NA	NA	False	NA	NA	NA	47705999	47701190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47701605_47702687_47702847_47705951
transcript_40046.known	chr12	-	6300	28	FSM	ENSG00000079337.16	ENST00000449771.7	6300	28	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	3.72880383663799	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACATTCTTTTATTTT	-22	True	NA	NA	False	TATAAA	-21	NA	47758880	47734362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47737686_47738021_47738094_47738192_47738248_47738689_47738755_47739142_47739231_47740140_47740192_47740304_47740396_47740641_47740824_47740914_47741041_47741504_47741603_47743529_47743677_47743986_47744069_47746859_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
transcript_40068.known	chr12	-	4213	26	FSM	ENSG00000061273.18	ENST00000080059.12	4213	26	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_24	41.0136757679679	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-14	True	NA	-9	True	AATAAA	-20	NA	47819903	47782721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47802223_47802275_47819766
transcript_4007.nnic	chr1	+	1854	11	NNC	ENSG00000117154.12	novel	1892	10	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	55.5212571903771	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	216	False	NA	16	True	ATTAAA	-23	NA	18107713	18378483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365497_18365618_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_40077.known	chr12	-	3216	25	FSM	ENSG00000061273.18	ENST00000552960.5	3216	25	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_24	39.1814688341313	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGACCCTGAGAGGAGAC	3	True	NA	NA	False	NA	NA	NA	47819886	47783650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
transcript_40079.known	chr12	-	4065	25	FSM	ENSG00000061273.18	ENST00000354334.7	4065	25	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_23	41.4685288970912	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	704	False	NA	-9	True	AATAAA	-20	NA	47819866	47782721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47802223_47802275_47819766
transcript_40091.nic	chr12	-	4109	24	NIC	ENSG00000061273.18	novel	4213	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_23	39.4558929162971	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	3	True	NA	-9	True	AATAAA	-20	NA	47819961	47782721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
transcript_4010.known	chr1	+	1892	10	FSM	ENSG00000117154.12	ENST00000251296.4	1892	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	21.6920079724433	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	9	True	NA	16	True	ATTAAA	-23	NA	18107797	18378483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_40109.known	chr12	-	4092	16	FSM	ENSG00000079337.16	ENST00000395358.7	4092	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.96316371938716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCATTGTGAATATTTAG	462	False	NA	-3	True	AATAAA	-19	NA	47758645	47744452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
transcript_40144.known	chr12	+	751	5	FSM	ENSG00000211584.14	ENST00000547002.5	751	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	54.8059075282948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGCCTTAGGACCTGG	4645	False	NA	NA	False	NA	NA	NA	47758577	47780307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47758661_47760215_47760402_47772169_47772321_47779027_47779196_47780144
transcript_40145.nic	chr12	+	2360	5	NIC	ENSG00000211584.14	novel	577	4	NA	NA	-176	843	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	51.5479146037936	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTCTGGTGGTTGCTT	4885	False	NA	29	True	AATACA	-14	NA	47758817	47781667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_47759150_47760215_47760402_47772169_47772321_47779027_47779196_47780144
transcript_40156.nic	chr12	+	1130	4	NIC	ENSG00000211584.14	novel	2978	3	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	62.3110477095889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTCCATTTTCTTC	82	False	NA	20	True	AATAAA	-15	NA	47773157	47782751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_47773441_47779027_47779196_47780144_47780290_47782217
transcript_40157.known	chr12	+	2978	3	FSM	ENSG00000211584.14	ENST00000442218.3	2978	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	4	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTCCATTTTCTTC	8	True	NA	20	True	AATAAA	-15	NA	47773237	47782751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47773441_47779027_47779196_47780144
transcript_40160.known	chr12	+	776	8	FSM	ENSG00000134291.12	ENST00000550552.5	776	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	68.5103894996062	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGTAGAAGAGAGCACAG	23	True	NA	NA	False	NA	NA	NA	47963608	47968256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_40161.known	chr12	+	810	8	FSM	ENSG00000134291.12	ENST00000552561.5	810	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	66.6844534095513	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCTATTGGTTCTTCC	19	True	NA	NA	False	NA	NA	NA	47963604	47968229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_40162.known	chr12	+	1414	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	83.8246469039472	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	4	True	NA	-22	True	NA	NA	NA	47963634	47968849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_40163.known	chr12	+	1539	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	82.4697842007753	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	10	True	NA	7	True	AATAAA	-17	NA	47963595	47968878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_40174.known	chr12	-	5059	54	FSM	ENSG00000139219.19	ENST00000380518.8	5059	54	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_52	9.94484612249694	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGACTTGTGGTTTGT	-1	True	NA	-1	True	ATTAAA	-24	NA	48004476	47972966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_47999918_48000126_48004236
transcript_40175.known	chr12	-	4442	53	FSM	ENSG00000139219.19	ENST00000337299.7	4442	53	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_52	11.8329096793346	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTGAACCCAGAAACAA	0	True	NA	NA	False	NA	NA	NA	48004506	47973406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_48004236
transcript_40185.known	chr12	-	747	2	FSM	ENSG00000139219.19	ENST00000490609.2	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCTTCCAAGACAC	NA	False	NA	NA	False	NA	NA	NA	48004554	47999696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48000126_48004236
transcript_40187.known	chr12	+	3476	25	FSM	ENSG00000152556.17	ENST00000340802.12	3476	25	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	173.510201229079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	0	True	NA	4	True	AATAAA	-15	NA	48105922	48146404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48106138_48107364_48107456_48108071_48108195_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_40190.nic	chr12	+	2962	23	NIC	ENSG00000152556.17	novel	3476	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	112.684568524138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	0	True	NA	9	True	AATAAA	-19	NA	48105922	48146104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_48106138_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_40193.known	chr12	+	3090	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.072150108103	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	15	True	NA	4	True	AATAAA	-15	NA	48119363	48146404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_40194.known	chr12	+	2867	23	FSM	ENSG00000152556.17	ENST00000551339.6	2867	23	0	0	0	0	multi-exon	FALSE	canonical	2	103	junction_1	104.875526377977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGTCACTGTGCTTT	-22	True	NA	-7	True	AATAAA	-3	NA	48119326	48146088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48119463_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_40199.nic	chr12	+	2762	22	NIC	ENSG00000152556.17	novel	3063	22	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	160.785656110501	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	-1	True	NA	9	True	AATAAA	-19	NA	48119298	48146104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_40200.known	chr12	+	3063	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.962325388254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	-6	True	NA	9	True	AATAAA	-19	NA	48119342	48146104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_40213.known	chr12	-	2610	4	FSM	ENSG00000177981.11	ENST00000536549.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.3666251038423	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-4	True	NA	0	True	AATAAA	-16	NA	48157595	48147788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48149999_48151200_48151306_48153367_48153526_48157458
transcript_40215.known	chr12	+	2283	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGACTGGTACTAAGG	6	True	NA	15	True	AATAAA	-19	NA	48183643	48185926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48183600_48185900
transcript_40216.known	chr12	-	7227	6	FSM	ENSG00000167528.13	ENST00000547026.6	7227	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3.2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTCTCTAGGTCT	-15	True	NA	-3	True	AATAAA	-20	NA	48350919	48337179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48343728_48344598_48344713_48345344_48345475_48347251_48347344_48347906_48348116_48350785
transcript_40232.nic	chr12	-	2399	11	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	97.3992299764223	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-8	True	NA	-1	True	AAGAAA	-40	NA	48682247	48653401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48681857_48682066_48682186
transcript_40238.known	chr12	-	2373	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	76.1997051288809	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTCTTTTTACCC	1	True	NA	68	True	ATTAAA	-17	NA	48682238	48653210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_40241.nic	chr12	-	2129	10	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	88.2232017857736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	NA	False	NA	-1	True	AAGAAA	-40	NA	48682287	48653401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_40248.known	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	5.63332716962187	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	22	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_40249.known	chr12	-	2017	8	FSM	ENSG00000129315.11	ENST00000417344.2	2017	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.01019665507731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAGAGGAG	54	True	NA	NA	False	NA	NA	NA	48716675	48693032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_40250.nic	chr12	+	2734	14	NIC	ENSG00000167535.8	novel	1872	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.606007829426	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	-21	True	NA	15	True	AATAAA	-15	NA	48815569	48828941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_48815729_48816872_48816996_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_40251.known	chr12	+	1814	13	FSM	ENSG00000167535.8	ENST00000540990.5	1814	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.8051270017527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGATCCCCTTAGCAG	NA	False	NA	NA	False	NA	NA	NA	48814450	48828200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48814554_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_40252.known	chr12	+	1872	13	FSM	ENSG00000167535.8	ENST00000536187.6	1872	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	17.4944435623302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTTCCCACCAGACTC	-4	True	NA	NA	False	NA	NA	NA	48815586	48828219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48815729_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_40256.known	chr12	+	2931	13	FSM	ENSG00000167535.8	ENST00000301050.7	2931	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	7.92674796706274	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	-12	True	NA	15	True	AATAAA	-15	NA	48818495	48828941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48818975_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_40260.nic	chr12	+	3402	12	ISM	ENSG00000167535.8	ENST00000301050.7	2931	13	-10	0	2	0	intron_retention	FALSE	canonical	3	53	junction_1	8.2251378445582	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	-22	True	NA	15	True	AATAAA	-15	NA	48818485	48828941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_48818975_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973
transcript_40262.known	chr12	+	2237	12	FSM	ENSG00000167535.8	ENST00000547392.5	2237	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	20.455555530616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGGACTGCTTTGGCA	-4	True	NA	NA	False	AAGAAA	-32	NA	48818503	48828336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48818975_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_40275.known	chr12	-	3256	17	FSM	ENSG00000174243.10	ENST00000308025.8	3256	17	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	17.8289397819949	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAGTTCTAGTTAAACT	-1	True	NA	-5	True	AATAAA	-23	NA	48852163	48829755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48830693_48831141_48831317_48832077_48832187_48832421_48832574_48833276_48833520_48834319_48834498_48836120_48836267_48836568_48836795_48836893_48837038_48837280_48837394_48837523_48837658_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_40285.known	chr12	-	1653	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	7.08431365765238	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCGTATTTTTTTC	-2	True	NA	-11	True	TATAAA	-4	NA	48865870	48857144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
transcript_40286.nic	chr12	-	997	4	ISM	ENSG00000172602.11	ENST00000309739.6	1653	5	-2	3413	-2	472	5prime_fragment	FALSE	canonical	3	112	junction_1	7.78888096369861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGGTGTGGTGGTGAG	-4	True	NA	NA	False	NA	NA	NA	48865872	48860557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_48861132_48862008_48862119_48864782_48864871_48865647
transcript_40287.nic	chr12	-	1874	3	ISM	ENSG00000172602.11	ENST00000649147.1	1989	4	-2	2872	-2	472	5prime_fragment	FALSE	canonical	3	123	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGGTGTGGTGGTGAG	-4	True	NA	NA	False	NA	NA	NA	48865872	48860557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_48862119_48864782_48864871_48865647
transcript_40305.known	chr12	-	4041	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_1	25.8891869319992	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGTGTAATGACCTTA	-15	True	NA	-36	True	AATAAA	-18	NA	48957487	48935722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_40308.known	chr12	-	1089	4	FSM	ENSG00000134287.10	ENST00000447318.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	361.499654218369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGCCACCCTCT	-5	True	NA	-57	True	NA	NA	NA	48957477	48938553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48939109_48939654_48939780_48940947_48941189_48957309
transcript_40313.nnic	chr12	-	2702	2	NNC	ENSG00000134287.10	novel	563	2	NA	NA	0	-489	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTGGAGCCGACCTT	-15	True	NA	-14	True	ATTAAA	-11	NA	48957487	48936211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_48938848_48957421
transcript_40314.known	chr12	-	4957	1	FSM	ENSG00000134285.11	ENST00000553027.1	4957	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTAGGAGTTGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	48926474	48921517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48921500_48926500
transcript_40315.known	chr12	+	1792	8	FSM	ENSG00000139537.11	ENST00000320516.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.59078981795143	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTTATATCTTTTC	-12	True	NA	NA	False	ATTAAA	-18	NA	48904132	48921576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48904469_48904945_48905114_48914403_48914574_48916969_48917109_48918274_48918473_48918684_48918904_48920929_48921083_48921167
transcript_40316.known	chr12	-	691	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	39.8768103037342	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGCATTCTTCATCT	12	True	NA	-16	True	AATAAA	-18	NA	48925492	48921962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_40317.known	chr12	-	630	5	FSM	ENSG00000134285.11	ENST00000444214.6	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	188.741224961586	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-2	True	NA	-12	True	AATAAA	-22	NA	48924967	48921958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48924773
transcript_40318.known	chr12	-	2246	5	FSM	ENSG00000169884.14	ENST00000301061.9	2246	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGGATGCAGATGGTGA	-1	True	NA	NA	False	AATAAA	-14	NA	48971735	48965339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48966554_48967945_48968320_48970088_48970352_48970455_48970570_48971454
transcript_40319.known	chr12	-	20635	55	FSM	ENSG00000167548.18	ENST00000301067.12	20635	55	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	5.94502131734183	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGGCTCCGTCCCATGA	-14	True	NA	NA	False	AATAAA	-19	NA	49060794	49018977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49021873_49022042_49022152_49022279_49022354_49022589_49022876_49024577_49024709_49024809_49024947_49026181_49027323_49027802_49027931_49028008_49028142_49028827_49028959_49029060_49029237_49029400_49029477_49030279_49030440_49030600_49030769_49030892_49031034_49031174_49033965_49034066_49034300_49034409_49034477_49034581_49034667_49034811_49034936_49037124_49038990_49039221_49039359_49039434_49039618_49039723_49041536_49041654_49041706_49041916_49041991_49042088_49042331_49042560_49042646_49042740_49042879_49043075_49043187_49043362_49043429_49043634_49043783_49043867_49043999_49044199_49044305_49044402_49044523_49044743_49044966_49045919_49045968_49046064_49046175_49046259_49046425_49046608_49046791_49047964_49048070_49048658_49048770_49049104_49049219_49049681_49050791_49050885_49052425_49052563_49052710_49052914_49053073_49053206_49053322_49053475_49053642_49053977_49054141_49054306_49054417_49054527_49054752_49054899_49055027_49055275_49055362_49059612
transcript_40323.known	chr12	-	1497	12	FSM	ENSG00000181929.13	ENST00000552212.5	1497	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	102.551418266301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCAGACAAATTCTGAT	1	True	NA	NA	False	NA	NA	NA	49018748	49002613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018523
transcript_40324.known	chr12	-	1657	12	FSM	ENSG00000181929.13	ENST00000548065.7	1657	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_11	35.1570267361394	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAGTGTTTGATTTTT	1	True	NA	-26	True	ATTAAA	-21	NA	49018776	49002273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_40325.nnic	chr12	-	1740	12	NNC	ENSG00000181929.13	novel	1683	12	NA	NA	-13	0	intron_retention	FALSE	canonical	1	1	junction_10	103.126657261915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	976	False	NA	-30	True	ATTAAA	-17	NA	49018820	49002277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005896_49013061_49013111_49018731
transcript_40326.known	chr12	-	1679	12	FSM	ENSG00000181929.13	ENST00000546531.5	1679	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	102.861296321754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAAATCTAATTAAATG	-10	True	NA	-64	True	NA	NA	NA	49018787	49002311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005593_49005742_49005853_49013061_49013111_49018731
transcript_40334.known	chr12	+	858	3	FSM	ENSG00000257913.3	ENST00000547395.1	858	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTCCTCACCGTCTCCA	41	False	NA	NA	False	NA	NA	NA	48998397	49018719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48998691_49009308_49009390_49018235
transcript_40335.known	chr12	+	1324	2	FSM	ENSG00000257913.3	ENST00000552933.2	1324	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACACTTGTCAGCGATTT	10	True	NA	3	True	AATAAA	-13	NA	48998366	49019235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48998691_49018235
transcript_40337.known	chr12	-	1173	8	FSM	ENSG00000167550.11	ENST00000301068.11	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	7.77226886213454	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-1	True	NA	-4	True	AATAAA	-23	NA	49069979	49064675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069733
transcript_40338.known	chr12	-	1261	8	FSM	ENSG00000167550.11	ENST00000550797.1	1261	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	20.976176963403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGAAATCTTTTGT	NA	False	NA	-30	True	AATAGA	-36	NA	49070025	49064701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069175_49069733
transcript_40339.known	chr12	-	1063	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	22.1785682335197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	31	False	NA	-14	True	AATAAA	-13	NA	49069947	49064685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
transcript_40349.known	chr12	-	2235	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	17.7833094150105	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACCTGTCTCTGTGTA	-2	True	NA	-7	True	AATAAA	-30	NA	49110850	49097141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_40353.known	chr12	-	2295	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	12.677335830134	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	1	True	NA	-4	True	AATAAA	-33	NA	49110847	49097138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_40371.nic	chr12	-	2452	16	NIC	ENSG00000139636.16	novel	2295	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	49	junction_5	13.0632648633061	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	NA	False	NA	-4	True	AATAAA	-33	NA	49110908	49097138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_4038.known	chr1	+	5045	1	FSM	ENSG00000179023.9	ENST00000400664.3	5045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACACACACCAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	18480929	18485974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_18480900_18486000
transcript_4039.known	chr1	-	2124	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	35.8723663377072	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-12	True	NA	-8	True	AATAAA	-16	NA	18902553	18871429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_40393.known	chr12	-	2800	15	FSM	ENSG00000139636.16	ENST00000550867.5	2800	15	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	13.4346490805814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGTTTTTTTAAAG	26	True	NA	-23	True	AATAAA	-14	NA	49110667	49097157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_40407.known	chr12	+	2823	4	FSM	ENSG00000167553.17	ENST00000301072.11	2823	4	0	0	0	0	multi-exon	FALSE	canonical	3	752	junction_2	185.387881660767	1579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCTTGGAATCCTGAT	0	True	NA	23	True	AATAAA	-16	NA	49265081	49274600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49265185_49269464_49269688_49269827_49269977_49272252
transcript_4041.nnic	chr1	-	3247	16	NNC	ENSG00000159423.17	novel	3139	15	NA	NA	-33	0	intron_retention	FALSE	canonical	2	5	junction_7	49.1419711991016	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-7	True	NA	-8	True	AATAAA	-16	NA	18902588	18871429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881418_18881494_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_40412.known	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_3	1164.84772490752	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	299	False	NA	NA	False	NA	NA	NA	49188899	49184958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
transcript_40413.known	chr12	-	1782	4	FSM	ENSG00000167552.15	ENST00000552924.2	1782	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1460.49649092355	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-5	True	NA	7	True	AATGAA	-25	NA	49189078	49184770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188888
transcript_40414.known	chr12	-	1672	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	0	0	0	multi-exon	FALSE	canonical	3	2716	junction_1	447.904007573051	8611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTGTGTTTTCTAT	-7	True	NA	-17	True	AATAAA	-22	NA	49189080	49184794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
transcript_40417.known	chr12	-	984	3	FSM	ENSG00000167552.15	ENST00000546918.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	2716	junction_1	544.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGACCTGACAGAATTC	7	True	NA	NA	False	NA	NA	NA	49189066	49185620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186834_49188976
transcript_40418.known	chr12	-	673	3	FSM	ENSG00000167552.15	ENST00000548363.1	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_1	214.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTTCCTCTCTTTTGT	215	False	NA	NA	False	AATAAA	-13	NA	49188983	49186015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49186459_49186610_49186834_49188976
transcript_40419.known	chr12	+	675	2	FSM	ENSG00000258017.3	ENST00000656133.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTAGGCTGCGCTTTGT	-10	True	NA	NA	False	NA	NA	NA	49130908	49188484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49131382_49188282
transcript_40421.known	chr12	-	1627	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	8406	junction_1	791.097128465694	17585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTCCTGCGTTTTT	-1	True	NA	-23	True	AGTAAA	-17	NA	49131395	49127781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
transcript_40422.known	chr12	-	3198	3	FSM	ENSG00000123416.15	ENST00000332858.10	3198	3	0	0	0	0	multi-exon	FALSE	canonical	3	8406	junction_1	520	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTGTTTCCTGCGT	-1	True	NA	-27	True	AGTAAA	-13	NA	49131395	49127785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49128939_49129241_49129391_49129499
transcript_40423.known	chr12	-	1802	4	FSM	ENSG00000167552.15	ENST00000679733.1	1802	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1600.02090264124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATTTAAAGTATCTTA	-5	True	NA	92	True	AATAAA	-45	NA	49189078	49184685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186587_49186834_49188976
transcript_40425.nic	chr12	+	2524	16	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	84.6212476601211	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	NA	False	NA	13	True	AATAAA	-13	NA	49323194	49331731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330574_49330660_49330944_49331213_49331408_49331572
transcript_4043.known	chr1	-	3139	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	15.6010530780091	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-14	True	NA	-8	True	AATAAA	-16	NA	18902555	18871429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_40435.known	chr12	+	2551	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	74.4740743823113	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	-13	True	NA	13	True	AATAAA	-13	NA	49323254	49331731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
transcript_40447.known	chr12	+	2771	14	FSM	ENSG00000135451.13	ENST00000551245.5	2771	14	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	74.8725939542887	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	-24	True	NA	-48	True	NA	NA	NA	49323243	49331670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49331408_49331572
transcript_40452.nic	chr12	+	3013	14	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	-41	0	intron_retention	FALSE	canonical	3	132	junction_11	74.4093109908308	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	NA	False	NA	13	True	AATAAA	-13	NA	49323194	49331731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329992_49330144_49330944_49331213_49331408_49331572
transcript_40461.nic	chr12	+	3227	13	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	132	junction_11	74.3514551901231	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	-17	True	NA	13	True	AATAAA	-13	NA	49323250	49331731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329992_49330144_49331408_49331572
transcript_40463.nic	chr12	+	3166	13	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	-41	0	intron_retention	FALSE	canonical	3	133	junction_11	74.2631862589623	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	NA	False	NA	13	True	AATAAA	-13	NA	49323194	49331731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49330944_49331213_49331408_49331572
transcript_40469.nic	chr12	+	3436	12	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	-41	0	intron_retention	FALSE	canonical	3	151	junction_5	73.5468591842491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	NA	False	NA	13	True	AATAAA	-13	NA	49323194	49331731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49331408_49331572
transcript_4047.known	chr1	-	2957	14	FSM	ENSG00000159423.17	ENST00000538839.5	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	38.7565608112634	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTGGTGGATGGTC	13	True	NA	-10	True	AATAAA	-14	NA	18902528	18871431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_40475.known	chr12	+	1800	9	FSM	ENSG00000135406.14	ENST00000257860.9	1800	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCAGTGCATTTGTTTC	0	True	NA	NA	False	AATAAA	-18	NA	49295146	49298686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49295746_49296177_49296239_49296431_49296528_49296888_49297057_49297147_49297274_49297356_49297578_49297676_49297727_49297957_49298038_49298287
transcript_40486.known	chr12	+	675	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	156.034896381831	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	-13	True	NA	28	True	AATAAA	-40	NA	49323254	49324392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
transcript_40487.known	chr12	+	623	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	132.03619032506	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	-13	True	NA	52	True	AATAAA	-45	NA	49323254	49324416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
transcript_40489.known	chr12	+	778	3	FSM	ENSG00000135451.13	ENST00000550709.5	778	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	10.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCCTTTTCCAGT	-11	True	NA	16	True	AATAAA	-28	NA	49323256	49324380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844
transcript_40491.known	chr12	+	839	2	FSM	ENSG00000135451.13	ENST00000549534.1	839	2	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATATCACTTCTTCT	5	True	NA	1	True	AATAAA	-13	NA	49323272	49324365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603
transcript_40493.known	chr12	-	2073	2	FSM	ENSG00000186897.5	ENST00000334221.5	2073	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTGGCTGCTTAACT	19	True	NA	NA	False	AATAAA	-15	NA	49337188	49332408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49333234_49335940
transcript_40494.known	chr12	+	4447	4	FSM	ENSG00000178401.16	ENST00000549441.7	4447	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTATTCTCTCTATTCTC	-2	True	NA	NA	False	AATAAA	-28	NA	49346887	49353690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49347552_49347643_49348106_49348765_49349713_49351316
transcript_40496.known	chr12	+	3320	15	FSM	ENSG00000123352.18	ENST00000553127.5	3320	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	86.6779165906161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTTTCATAGCAGCA	6	True	NA	17	True	AATAAA	-26	NA	49367464	49527424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49371227_49371291_49387053_49387138_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_40500.known	chr12	+	2781	15	FSM	ENSG00000123352.18	ENST00000549412.5	2781	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	87.4548279900859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCATTCTAAGTA	2	True	NA	19	True	AAAAAG	-18	NA	49366904	49526365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49512861_49512906_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_40502.known	chr12	+	3240	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	44.1612162168512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	3	True	NA	18	True	AATAAA	-27	NA	49367461	49527425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_40507.known	chr12	+	3158	13	FSM	ENSG00000123352.18	ENST00000321898.10	3158	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	26.840061268352	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	16	True	NA	12	True	AATAAA	-21	NA	49367474	49527419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_40516.nic	chr12	+	740	6	ISM	ENSG00000123352.18	ENST00000549412.5	2781	15	473	35674	-6	0	5prime_fragment	FALSE	canonical	3	127	junction_2	63.1715125669791	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTACTCAAAGAATGGA	4	True	NA	NA	False	NA	NA	NA	49367377	49490691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_40519.known	chr12	+	1061	5	FSM	ENSG00000123352.18	ENST00000549375.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	39.1942278913618	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCGACCTTGAAACATA	3	True	NA	NA	False	NA	NA	NA	49367461	49491159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_40530.known	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	201.1618474982	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	24	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
transcript_40542.nic	chr12	-	2204	15	ISM	ENSG00000187778.14	ENST00000550165.5	1936	16	91	-61	90	0	3prime_fragment	FALSE	canonical	3	55	junction_14	149.921697249339	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	115	False	NA	-7	True	AATAAA	-18	NA	49568010	49558301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646
transcript_40546.known	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_5	47.6864760702655	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-17	True	NA	-4	True	AATAAA	-21	NA	49568142	49558298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
transcript_40560.nic	chr12	-	1823	14	NIC	ENSG00000187778.14	novel	1938	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	159.64390848007	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-25	False	NA	-7	True	AATAAA	-18	NA	49568150	49558301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49568047
transcript_40561.known	chr12	-	2450	14	FSM	ENSG00000187778.14	ENST00000551625.5	2450	14	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_13	155.284583185672	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	375	False	NA	-7	True	AATAAA	-18	NA	49567750	49558301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566842_49567646
transcript_40574.known	chr12	-	1666	13	FSM	ENSG00000187778.14	ENST00000548602.5	1666	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	174.896378051564	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTATTTTATTTTTTTT	-6	True	NA	-6	True	AATAAA	-19	NA	49568131	49558300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49568047
transcript_4059.known	chr1	-	844	6	FSM	ENSG00000159423.17	ENST00000432718.1	844	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	64.4316692318304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGGGACAGCGGCAGC	41	False	NA	NA	False	NA	NA	NA	18902724	18883110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_18883199_18883278_18883429_18885472_18885629_18889361_18889455_18890011_18890106_18902461
transcript_40614.known	chr12	+	3182	26	FSM	ENSG00000110844.14	ENST00000548825.7	3182	26	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	21.3468124084136	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	0	True	NA	9	True	TTTAAA	-20	NA	49623560	49644665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_40632.nic	chr12	+	2623	24	ISM	ENSG00000110844.14	ENST00000548825.7	3182	26	-174	936	-27	-82	5prime_fragment	TRUE	canonical	3	62	junction_2	19.6770715696634	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAGAAGAGAAGACACAAG	NA	False	NA	NA	False	AAAAAG	-5	NA	49623386	49643729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690
transcript_40684.known	chr12	+	2771	11	FSM	ENSG00000139644.13	ENST00000549385.5	2771	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1223.24422745419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACACCTA	2	False	NA	77	True	ATTAAA	-14	NA	49741573	49764726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49741612_49741956_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_40695.known	chr12	+	2837	10	FSM	ENSG00000139644.13	ENST00000267115.10	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	2715	junction_1	225.804460365573	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	0	True	NA	20	True	AATAAA	-19	NA	49741556	49764934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49741612_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_40704.known	chr12	+	882	10	FSM	ENSG00000139644.13	ENST00000552370.5	882	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	996.624426207576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTGCACACATTACA	-16	True	NA	-25	True	NA	NA	NA	49750619	49762948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49750706_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_40713.known	chr12	+	3154	25	FSM	ENSG00000110844.14	ENST00000380281.5	3154	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	24.2451312409087	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGACTCTTTTCCATGT	6983	False	NA	10	True	TTTAAA	-21	NA	49630543	49644666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642926_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_40714.known	chr12	+	912	3	FSM	ENSG00000110844.14	ENST00000552301.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTTCTTCTCTGTGCA	0	True	NA	NA	False	TATAAA	-6	NA	49568217	49583264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49568724_49573657_49573729_49582929
transcript_40718.nnic	chr12	-	4808	14	NNC	ENSG00000167566.17	novel	4882	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.9064064931373	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCCTGAGTCGGCT	566	False	NA	-14	True	AATAAA	-15	NA	49828465	49791151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_49791618_49791743_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
transcript_40723.nnic	chr12	-	5013	13	NNC	ENSG00000167566.17	novel	4882	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	29.8272805777977	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCCTGAGTCGGCT	566	False	NA	-14	True	AATAAA	-15	NA	49828465	49791151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_49792052_49792366_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
transcript_40727.known	chr12	-	4882	13	FSM	ENSG00000167566.17	ENST00000335999.7	4882	13	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_11	8.58292879305582	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCCTGAGTCGGCT	-1	True	NA	-14	True	AATAAA	-15	NA	49828413	49791151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
transcript_40736.known	chr12	-	3226	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTGTGGTGATTTC	-1	True	NA	-2	True	AATAAA	-17	NA	49843106	49836042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49839016_49842853
transcript_40738.known	chr12	-	4667	12	FSM	ENSG00000135472.9	ENST00000320634.8	4667	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	2.18560277821297	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTCCCTCGTCTGCCG	-19	True	NA	NA	False	AATAAA	-19	NA	49903900	49866895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49870654_49887385_49887440_49889106_49889203_49889480_49889569_49890116_49890155_49890682_49890723_49891063_49891115_49897030_49897085_49897518_49897584_49897986_49898091_49901129_49901326_49903777
transcript_40739.known	chr12	+	1449	4	FSM	ENSG00000161798.7	ENST00000293599.7	1449	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCACCTCTGTCTCTCCT	0	True	NA	15	True	AATAAA	-15	NA	49961871	49965682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49962381_49963491_49963657_49964091_49964176_49964991
transcript_40747.known	chr12	-	3080	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_16	45.9127909737581	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	48	True	NA	NA	False	AGTAAA	-17	NA	50025400	49989163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_40748.nnic	chr12	-	3110	17	NIC	ENSG00000161800.13	novel	3080	17	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_16	57.6709076896662	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-27	True	NA	NA	False	AGTAAA	-17	NA	50025475	49989163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025372
transcript_40749.known	chr12	-	3106	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_16	39.720458755533	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-46	True	NA	NA	False	AGTAAA	-19	NA	50025494	49989161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
transcript_40758.nic	chr12	-	2922	16	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	68.3117038939074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	50025515	49989163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50016630_50016720_50025397
transcript_4077.known	chr1	-	5408	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_14	59.234737546742	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	20	False	NA	NA	False	NA	NA	NA	19251509	19216873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
transcript_40777.known	chr12	+	3283	13	FSM	ENSG00000066117.15	ENST00000394963.9	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_4	49.4449750283642	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	-3	True	NA	78	True	NA	NA	NA	50085341	50100707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_40780.known	chr12	+	3237	12	FSM	ENSG00000066117.15	ENST00000381513.8	3237	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	127.907701743442	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	-26	True	NA	13	True	AATAAA	-14	NA	50085199	50100642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50098713_50098816_50098946
transcript_40783.nic	chr12	+	3214	12	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	23	0	intron_retention	FALSE	canonical	3	58	junction_4	126.337407349794	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	-3	True	NA	13	True	AATAAA	-14	NA	50085222	50100642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_40784.nic	chr12	+	3266	12	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	36	0	intron_retention	FALSE	canonical	3	58	junction_4	126.337407349794	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	10	True	NA	78	True	NA	NA	NA	50085235	50100707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_40791.nic	chr12	+	3084	11	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	36	0	intron_retention	FALSE	canonical	3	22	junction_4	141.754153378305	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	10	True	NA	13	True	AATAAA	-14	NA	50085235	50100642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_40794.nic	chr12	+	504	2	ISM	ENSG00000066117.15	ENST00000547637.1	587	4	-122	569	31	-524	5prime_fragment	FALSE	canonical	3	563	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGATCCTGGGGCAG	5	True	NA	20	True	NA	NA	NA	50085230	50086348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_50085547_50086160
transcript_40795.known	chr12	+	2887	8	FSM	ENSG00000167588.13	ENST00000301149.8	2887	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	1.95875845725744	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGAGTTGGGAGAGGG	-3	True	NA	NA	False	AATAAA	-19	NA	50104007	50111313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50104092_50104573_50104752_50105547_50105689_50106287_50106427_50106804_50106918_50107566_50107801_50108023_50108131_50109422
transcript_40803.nnic	chr12	-	2143	11	NNC	ENSG00000139624.14	novel	2132	11	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	200.674961068889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTACTGTCTCAACCTCT	-34	True	NA	-15	True	ATTAAA	-15	NA	50167378	50129797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_50130695_50133932_50134069_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_40805.known	chr12	-	2132	11	FSM	ENSG00000139624.14	ENST00000547787.5	2132	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	188.98719533344	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	41	True	NA	-16	True	ATTAAA	-14	NA	50167303	50129798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
transcript_40812.known	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	40.307460327149	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-25	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_40820.nic	chr12	-	2065	9	NIC	ENSG00000139624.14	novel	2132	11	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	158.34910009217	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	9965	False	NA	-16	True	ATTAAA	-14	NA	50167495	50129798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50143073_50143205_50143951_50144058_50167100
transcript_40827.nic	chr12	-	1979	8	NIC	ENSG00000139624.14	novel	2132	11	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	176.705450755008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	9965	False	NA	-16	True	ATTAAA	-14	NA	50167495	50129798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_40829.known	chr12	+	677	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	21	True	NA	13	True	ATTAAA	-13	NA	50112236	50120451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50112498_50120035
transcript_40830.known	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	20	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50112302_50120035
transcript_40831.known	chr12	-	3669	11	FSM	ENSG00000050405.14	ENST00000394943.7	3669	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	57.7421856184887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	0	True	NA	-12	True	AATAAA	-21	NA	50283506	50175787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_40833.known	chr12	-	2162	8	FSM	ENSG00000050405.14	ENST00000552909.5	2162	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	58.5954654510788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATACTAGAGATAAC	-6	True	NA	NA	False	AAAACA	-25	NA	50222356	50176884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50178070_50181903_50182035_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
transcript_40836.known	chr12	-	3706	11	FSM	ENSG00000050405.14	ENST00000341247.9	3680	11	-26	0	-26	0	multi-exon	FALSE	canonical	3	61	junction_9	46.1415214313529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	NA	False	NA	-12	True	AATAAA	-21	NA	50283546	50175787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_40840.nic	chr12	+	2735	17	NIC	ENSG00000161813.23	novel	6441	16	NA	NA	-10	-245	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	102.521472598427	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACATCCTTCAGTATAGG	-44	True	NA	NA	False	AAAAAG	-4	NA	50400846	50476211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_40845.known	chr12	+	2853	16	FSM	ENSG00000161813.23	ENST00000518444.5	2853	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	93.7016542009798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTAGATTTTTTTT	38	True	NA	16	True	AGTAAA	-22	NA	50400928	50476463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427764_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_40854.known	chr12	+	6296	15	FSM	ENSG00000161813.23	ENST00000293618.12	6296	15	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_10	105.536457575338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCAGGACTGGTTTCC	NA	False	NA	1	True	AATAAA	-7	NA	50400808	50479996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_40856.known	chr12	+	3621	15	FSM	ENSG00000161813.23	ENST00000347328.9	3621	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	94.3828503965609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATGTAAATGGTGGTT	24	False	NA	NA	False	AGTAAA	-20	NA	50400984	50477497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_40866.nnic	chr12	+	1946	12	NNC	ENSG00000161813.23	novel	1578	12	NA	NA	-10	1156	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_11	144.262673648676	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	-44	True	NA	5	True	AATAAA	-17	NA	50400846	50456118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
transcript_40867.known	chr12	+	1578	12	FSM	ENSG00000161813.23	ENST00000518561.5	1578	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	118.807017629501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	-5	True	NA	6	True	AATAAA	-17	NA	50400955	50461487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_40869.nnic	chr12	+	1909	11	NNC	ENSG00000161813.23	novel	1577	11	NA	NA	-22	1156	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	119.706140193392	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	NA	False	NA	5	True	AATAAA	-17	NA	50400834	50456118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
transcript_40870.known	chr12	+	1577	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	69.758225321463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	17	True	NA	6	True	AATAAA	-17	NA	50400907	50461487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_40878.nic	chr12	+	723	6	ISM	ENSG00000161813.23	ENST00000518561.5	1578	12	-109	25888	-10	0	5prime_fragment	FALSE	canonical	3	73	junction_1	160.215604733122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	-44	True	NA	NA	False	AATAAA	-20	NA	50400846	50435599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487
transcript_40879.known	chr12	+	586	5	FSM	ENSG00000161813.23	ENST00000551886.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	164.812772563294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	41	True	NA	NA	False	AATAAA	-20	NA	50400931	50435599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430497_50430571_50435487
transcript_4088.known	chr1	-	4084	22	FSM	ENSG00000127463.16	ENST00000375208.7	4084	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	67.1968712153608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCCTGTGGTGAAAGAG	7	True	NA	36	True	NA	NA	NA	19251522	19218147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238858_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19244905_19245031_19251414
transcript_40886.known	chr12	+	8705	38	FSM	ENSG00000066084.13	ENST00000301180.10	8705	38	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_25	10.1594303401149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTAATCCTTCACAC	-18	True	NA	14	True	AATAAA	-14	NA	50504984	50748657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678_50678877_50680671_50680764_50683137_50683249_50685832_50685957_50686572_50686683_50691048_50691152_50692948_50693014_50695266_50695361_50695847_50695968_50697060_50697176_50698327_50698468_50699065_50699203_50704139_50704221_50706537_50706666_50708447_50708563_50714394_50714597_50718708_50718819_50718954_50719036_50721272_50721397_50723201_50723324_50724774_50724887_50727702_50727813_50728547_50728679_50731368_50731538_50732365_50732537_50734134_50734197_50735072_50735131_50737035_50737111_50739408_50739587_50741415_50741540_50744586
transcript_40889.known	chr12	+	2676	8	FSM	ENSG00000066084.13	ENST00000549620.5	2676	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	4.47213595499958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGAACAGAAGTATTCTT	-18	True	NA	NA	False	NA	NA	NA	50504984	50680282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678
transcript_40892.known	chr12	+	2412	7	FSM	ENSG00000123268.9	ENST00000262053.8	2412	7	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_1	14.0356688476182	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	19	True	NA	43	True	AATATA	-23	NA	50764100	50821162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
transcript_40896.known	chr12	+	3117	2	FSM	ENSG00000185432.12	ENST00000332160.5	3117	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTATATCTTTGCTG	-6	True	NA	14	True	AATAAA	-26	NA	50925014	50932508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50925537_50929913
transcript_40898.known	chr12	-	3762	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	83.3906235361626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	-13	True	NA	-1	True	AATAAA	-18	NA	51026384	50979783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_40899.known	chr12	-	2486	17	FSM	ENSG00000110911.17	ENST00000547198.5	2486	17	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	83.8221470958004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAAAGAGCTTTAATAT	-5	True	NA	-18	True	ATTAAA	-15	NA	51026338	50981008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_40903.known	chr12	-	1740	16	FSM	ENSG00000110911.17	ENST00000546743.5	1740	16	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_14	97.5605566928675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTCTGTCTTCTGCAG	1934	False	NA	NA	False	NA	NA	NA	51026400	50988319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008545_51010694_51010767_51026309
transcript_40905.known	chr12	-	2470	16	FSM	ENSG00000110911.17	ENST00000541174.6	2470	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	91.9367898794239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAATGAGTATGCAAGT	2193	False	NA	NA	False	AATACA	-18	NA	51026141	50987945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51025774
transcript_40906.known	chr12	-	4132	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	0	0	0	multi-exon	FALSE	canonical	1	95	junction_8	70.514490236641	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-13	True	NA	0	True	ATTAAA	-20	NA	51026384	50985991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_40907.nic	chr12	-	4158	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-77	4983	-15	0	5prime_fragment	FALSE	canonical	1	95	junction_8	71.1044927475676	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	1919	False	NA	0	True	ATTAAA	-20	NA	51026415	50985991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_40920.known	chr12	-	2125	18	FSM	ENSG00000110911.17	ENST00000546636.5	2125	18	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	101.646718409016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	3	True	NA	-37	True	ATTAAA	-29	NA	51026368	50979819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_40921.known	chr12	+	2106	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8116941111872	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	-6	True	NA	28	True	AGTAAA	-30	NA	51048326	51060424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_40922.known	chr12	+	1389	9	FSM	ENSG00000050426.16	ENST00000550929.5	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	28.2043325572508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTACTTACATCTGTG	NA	False	NA	NA	False	NA	NA	NA	51048317	51059805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048372_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_40923.known	chr12	+	2001	8	FSM	ENSG00000050426.16	ENST00000547318.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.6643656295021	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGGAAATGACTTAT	NA	False	NA	13	True	AGTAAA	-15	NA	51048300	51060409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_40927.known	chr12	+	1665	6	FSM	ENSG00000050426.16	ENST00000547008.5	1665	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	34.3604423720068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	8	True	NA	-27	True	NA	NA	NA	51048340	51060369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51056349_51056503_51058031_51058129_51059360
transcript_40929.known	chr12	+	1480	5	FSM	ENSG00000050426.16	ENST00000550100.5	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	33.436506994601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTAGCTTTTGTGTG	11	True	NA	-93	True	NA	NA	NA	51048343	51060303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_40931.known	chr12	+	563	4	FSM	ENSG00000050426.16	ENST00000549686.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	36.7453700787218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGCAGAGAGAGGAGC	5	True	NA	NA	False	NA	NA	NA	51048337	51059532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51056349_51056503_51058031_51058129_51059360
transcript_40932.known	chr12	+	1566	5	FSM	ENSG00000050426.16	ENST00000380135.7	1566	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	40.1707293934277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAAGCACTGTTTTTA	11	True	NA	-33	True	NA	NA	NA	51048343	51060363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058005_51058129_51059360
transcript_40933.known	chr12	+	1713	6	FSM	ENSG00000050426.16	ENST00000552739.5	1713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.873089298087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACCTGTTGATGGAAA	13	False	NA	5	True	AGTAAA	-7	NA	51048345	51060401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_40934.nic	chr12	-	4667	5	NIC	ENSG00000110925.7	novel	4517	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	11	junction_4	40.0710306830259	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	NA	False	NA	-1	True	ATTAAA	-17	NA	51083636	51061204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083228
transcript_40935.known	chr12	-	4517	5	FSM	ENSG00000110925.7	ENST00000228515.6	4517	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	31.751968442917	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	-2	True	NA	-1	True	ATTAAA	-17	NA	51083596	51061204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083338
transcript_40941.nic	chr12	-	2210	5	NIC	ENSG00000110925.7	novel	4517	5	NA	NA	7	-2457	intron_retention	FALSE	canonical	3	11	junction_4	40.0710306830259	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCTGCTCCCATGTT	NA	False	NA	-6	True	AAAACA	-12	NA	51083636	51063661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083228
transcript_40949.known	chr12	-	3807	15	FSM	ENSG00000135457.11	ENST00000257915.10	3807	15	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_14	24.330316186073	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTAGTGAATGATTA	-30	True	NA	95	True	TTTAAA	-35	NA	51173135	51093655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_40953.known	chr12	-	1862	14	FSM	ENSG00000135457.11	ENST00000548115.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	84.5418561647837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCTGCTCCTTCCTTC	193	False	NA	NA	False	NA	NA	NA	51172912	51095221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_40957.known	chr12	-	5157	11	FSM	ENSG00000184271.18	ENST00000636728.1	5157	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	4.03112887414927	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTGCTTGTTTCCTGT	425	False	NA	-5	True	AATAAA	-20	NA	51217693	51186935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769_51198024_51198549_51198687_51199746_51199869_51204172_51204369_51206788_51206884_51217641
transcript_40962.known	chr12	+	2064	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.121265174912	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCATTTCATGAAT	-1	True	NA	11	True	AATAAA	-20	NA	51238825	51243933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
transcript_40963.known	chr12	+	1117	4	FSM	ENSG00000183283.16	ENST00000425012.6	1117	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	154.379042907024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCCTTGGAGTTGGCT	-1	True	NA	NA	False	NA	NA	NA	51238825	51246717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51246060
transcript_40966.known	chr12	+	587	4	FSM	ENSG00000183283.16	ENST00000551313.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	111.086552841567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAATGTAACTGCTTTA	0	True	NA	NA	False	NA	NA	NA	51239294	51242510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51239336_51240342_51240462_51240870_51241117_51242329
transcript_40967.known	chr12	-	610	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	60.4041941148681	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGATCTTGATCTTCTT	19	True	NA	NA	False	NA	NA	NA	51269958	51246084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
transcript_40968.known	chr12	-	1062	4	FSM	ENSG00000170545.17	ENST00000398453.7	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	76.07160369605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTCTCATGTGCAAGA	-2	True	NA	-29	True	ATTAAA	-21	NA	51270198	51245350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270058
transcript_40969.known	chr12	-	1875	4	FSM	ENSG00000170545.17	ENST00000603798.6	1875	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	57.2033410057684	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGCCTCTGTTGTCCA	-24	True	NA	2	True	ATTAAA	-25	NA	51270415	51244557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270255
transcript_40970.known	chr12	-	1518	3	FSM	ENSG00000170545.17	ENST00000603864.5	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	17.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATTCAAATTAAAAAT	28	True	NA	-66	True	NA	NA	NA	51269949	51245387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51246120_51246750_51246832_51269244
transcript_40973.known	chr12	+	1811	4	FSM	ENSG00000183283.16	ENST00000436900.2	1811	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.922198009623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	15	False	NA	NA	False	AATAAA	-44	NA	51238902	51243785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51238921_51240342_51240462_51240898_51241117_51242329
transcript_40974.known	chr12	+	11764	25	FSM	ENSG00000050438.17	ENST00000453097.7	11764	25	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_24	26.3690422444367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACCTGTGGTGTTCTTTG	-10	True	NA	4	True	AATAAA	-17	NA	51424830	51515763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341_51474448_51475044_51475207_51485786_51485901_51488698_51488861_51489699_51489952_51493703_51493773_51494944_51495119_51496986_51497125_51504028_51504121_51505834_51505931_51507425
transcript_40978.known	chr12	+	3834	22	FSM	ENSG00000050438.17	ENST00000319957.10	3834	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	24.9353813411864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAGAAAAGA	1	True	NA	NA	False	AATATA	-17	NA	51424972	51497862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341_51474448_51475044_51475207_51485786_51485901_51488698_51488861_51489699_51489952_51493703_51493773_51494944_51495119_51496986
transcript_40984.known	chr12	+	2262	15	FSM	ENSG00000050438.17	ENST00000535225.6	2262	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	17.9541649991395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	19	True	NA	1	True	AATAAA	-15	NA	51391316	51474575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51391489_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_40985.nic	chr12	+	2329	15	ISM	ENSG00000050438.17	ENST00000319957.10	3834	22	-176	23287	-34	0	5prime_fragment	FALSE	canonical	3	59	junction_11	8.09289181684666	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	12	False	NA	1	True	AATAAA	-15	NA	51424796	51474575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_41.known	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00112_+_0_1100
transcript_41007.nic	chr12	-	2750	12	NIC	ENSG00000139629.16	novel	5207	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	9.04534033733291	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAAAGAAG	1	True	NA	NA	False	NA	NA	NA	51391646	51353768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_51354493_51355805_51355959_51357348_51357451_51358129_51358262_51359131_51359333_51360720_51360839_51364120_51364356_51365429_51365580_51377194_51377368_51379290_51379885_51383460_51383583_51391600
transcript_41018.known	chr12	+	427	3	FSM	ENSG00000259887.1	ENST00000562996.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAGCCTCCTCCAAGTC	NA	False	NA	NA	False	NA	NA	NA	51848222	51852729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51848564_51850260_51850311_51852693
transcript_41019.known	chr12	+	3319	2	FSM	ENSG00000167612.13	ENST00000548526.1	3319	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTATATGGCATATTAT	-1	True	NA	8	True	AGTAAA	-19	NA	51888102	51891657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51888332_51888567
transcript_41020.known	chr12	+	4531	9	FSM	ENSG00000135503.13	ENST00000257963.9	4531	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	4.87179381747627	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTGGTGCCATCTGT	-8	True	NA	12	True	ATTAAA	-16	NA	51951698	51997078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51951835_51975264_51975505_51976326_51976576_51980968_51981200_51983998_51984167_51985191_51985349_51986817_51986943_51991862_51991994_51993984
transcript_41033.nic	chr12	+	2810	9	NIC	ENSG00000123358.20	novel	2029	7	NA	NA	-22	0	intron_retention	FALSE	canonical	3	17	junction_3	42.5776863509515	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGATTCAGTCTGTCT	80	False	NA	8	True	AATAAA	-19	NA	52037219	52059501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_52037444_52041809_52041930_52043801_52043912_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_41040.nic	chr12	+	2700	8	NIC	ENSG00000123358.20	novel	2029	7	NA	NA	-22	0	intron_retention	FALSE	canonical	3	54	junction_2	25.2101372548458	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGATTCAGTCTGTCT	80	False	NA	8	True	AATAAA	-19	NA	52037219	52059501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_52037444_52041809_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_41043.known	chr12	+	3511	8	FSM	ENSG00000123358.20	ENST00000545748.5	3511	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	40.0667809884387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGATTCAGTCTGTCT	369	False	NA	8	True	AATAAA	-19	NA	52037714	52059501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52038750_52041809_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_41048.known	chr12	+	2485	7	FSM	ENSG00000123358.20	ENST00000394825.6	2485	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	41.1599184752459	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	-2	True	NA	10	True	AATAAA	-21	NA	52051441	52059503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52051569_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_41051.known	chr12	+	2678	8	FSM	ENSG00000123358.20	ENST00000243050.5	2678	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.4003891035856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCAGTCTGTCTCTGAT	786	False	NA	13	True	AATAAA	-24	NA	52051401	52059506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52051569_52052495_52052646_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_41053.known	chr12	+	846	4	FSM	ENSG00000123395.15	ENST00000553049.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	171.930864658508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCCTTCCAGATCACT	4	True	NA	NA	False	NA	NA	NA	52070002	52077104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52070072_52070353_52070484_52073574_52073903_52076785
transcript_41054.known	chr12	+	1433	4	FSM	ENSG00000123395.15	ENST00000336854.9	1433	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	71.0039122552804	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	-21	True	NA	22	True	AATAAA	-25	NA	52069977	52077495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785
transcript_41057.known	chr12	+	1625	9	FSM	ENSG00000135480.17	ENST00000331817.6	1625	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	4.49826355386165	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTGGTATCCTGGCTT	-2	True	NA	18	True	AATAAA	-31	NA	52233242	52248921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52233621_52235154_52235367_52237508_52237570_52238679_52238776_52241471_52241637_52243011_52243138_52245411_52245633_52248176_52248212_52248590
transcript_41077.known	chr12	-	1687	9	FSM	ENSG00000170421.13	ENST00000552150.5	1687	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	1342.11127984977	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTTTACTACCTGGGGA	-1	True	NA	-114	True	NA	NA	NA	52926469	52897296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52926411
transcript_41079.known	chr12	-	2126	9	FSM	ENSG00000170421.13	ENST00000552551.5	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	1326.73497259249	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	-10	True	NA	-4	True	AATAAA	-25	NA	52949842	52897186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949455
transcript_41080.known	chr12	-	1755	9	FSM	ENSG00000170421.13	ENST00000546897.5	1755	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	1343.71364485704	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCCCCTTGCCCATGC	8	True	NA	-98	True	NA	NA	NA	52949824	52897280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949714
transcript_41083.known	chr12	+	1420	8	FSM	ENSG00000111057.11	ENST00000388837.6	1420	8	0	0	0	0	multi-exon	FALSE	canonical	1	690	junction_1	2432.89275202528	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATGTCACTTTGTCTT	-5	True	NA	14	True	AATAAA	-14	NA	52948870	52952900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52948939_52949172_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_41096.known	chr12	+	1413	7	FSM	ENSG00000111057.11	ENST00000388835.4	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	2012	junction_3	1748.34376387101	5269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTGTCTTCTTTTG	-1	True	NA	20	True	AATAAA	-20	NA	52949117	52952906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_41124.known	chr12	-	2437	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTACTGCCTTTTACT	6	True	NA	NA	False	AATAAA	-18	NA	52949874	52946613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52948829_52949455_52949518_52949714
transcript_41127.known	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	52	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	935	False	NA	-13	True	AATACA	-14	NA	52949920	52948650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52948829_52949455_52949579_52949714
transcript_4113.known	chr1	+	507	2	FSM	ENSG00000230424.2	ENST00000437898.2	653	2	146	0	140	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAATCAGCACTTCTT	-13	True	NA	NA	False	AATATA	-25	NA	19210500	19240704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19210560_19240256
transcript_41130.known	chr12	-	542	2	FSM	ENSG00000170421.13	ENST00000546921.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTAGTTGGTGGAGAAGG	901	False	NA	NA	False	NA	NA	NA	52949954	52949215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52949518_52949714
transcript_41131.known	chr12	+	4848	29	FSM	ENSG00000111077.18	ENST00000314250.11	4848	29	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	5.48001936537618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTCAACACTTATTCA	20	True	NA	20	True	AATAAA	-26	NA	53050064	53064379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53050261_53051854_53051964_53052454_53052493_53053410_53053450_53053773_53053813_53053964_53054015_53054269_53054442_53055185_53055237_53055567_53055691_53055780_53055846_53057012_53057097_53057566_53057680_53057772_53057834_53058026_53058103_53058315_53058446_53058571_53058638_53058713_53058828_53059046_53060259_53060404_53060556_53060674_53061265_53061379_53061470_53061814_53061941_53062152_53062246_53062375_53062454_53062619_53062698_53063088_53063258_53063348_53063418_53063562_53063593_53063743
transcript_41138.known	chr12	+	1936	15	FSM	ENSG00000063046.18	ENST00000420463.7	1936	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	366.317728988686	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAACCTCTATCCAG	16	True	NA	-90	True	NA	NA	NA	53006455	53040280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034725_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_41143.known	chr12	-	2902	11	FSM	ENSG00000167778.9	ENST00000301463.9	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	6.8381283989115	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATCCTACTCTGA	-11	True	NA	-1	True	AATAGA	-18	NA	53079390	53064315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53065967_53066313_53066487_53066572_53066693_53067647_53067706_53068154_53068305_53073285_53073472_53074648_53074785_53075094_53075220_53075735_53075812_53077114_53077262_53079310
transcript_41149.nic	chr12	-	2959	10	NIC	ENSG00000167778.9	novel	2902	11	NA	NA	-23	-290	intron_retention	FALSE	canonical	3	101	junction_1	7.11978637493369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATCAGTATGGCCGGA	NA	False	NA	-19	True	GATAAA	-14	NA	53079427	53064605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53065967_53066313_53066487_53066572_53066693_53067647_53067706_53068154_53068305_53073285_53073472_53074648_53075220_53075735_53075812_53077114_53077262_53079310
transcript_4115.nnic	chr1	+	1241	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-259	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	139.926264064328	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGTGGCCCTCTTTTTT	-26	True	NA	17	True	AGTAAA	-14	NA	19251545	19260125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19258978_19260041
transcript_41155.known	chr12	-	2863	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTATTTTTATGTTCC	-9	True	NA	NA	False	CATAAA	-16	NA	53054438	53043188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
transcript_41156.known	chr12	+	4737	29	FSM	ENSG00000111077.18	ENST00000379902.7	4737	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.26813694939147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCCGAAATTGGAGTCAA	2410	False	NA	10	True	AATAAA	-16	NA	53046968	53064369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53047064_53051854_53051964_53052454_53052493_53053410_53053450_53053773_53053813_53053964_53054015_53054269_53054442_53055185_53055237_53055567_53055691_53055780_53055846_53057012_53057097_53057566_53057680_53057772_53057834_53058026_53058103_53058315_53058446_53058571_53058638_53058713_53058828_53059046_53060259_53060404_53060556_53060674_53061265_53061379_53061470_53061814_53061941_53062152_53062246_53062375_53062454_53062619_53062698_53063088_53063258_53063348_53063418_53063562_53063593_53063743
transcript_41157.known	chr12	+	947	4	FSM	ENSG00000167779.9	ENST00000301464.4	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	9.46337971105226	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	1	True	NA	26	True	AATAAA	-16	NA	53097666	53102340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53098052_53100711_53100858_53101040_53101161_53102044
transcript_41160.known	chr12	+	2073	15	FSM	ENSG00000167780.12	ENST00000301466.8	2073	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.914732033918978	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATTCATTCATTCA	-18	True	NA	8	True	AATAAA	-22	NA	53103485	53124535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53103660_53104150_53104207_53105106_53105244_53105560_53105621_53105906_53106015_53115389_53115655_53116096_53116167_53118349_53118435_53118889_53118936_53119123_53119254_53120785_53120884_53121302_53121402_53123080_53123217_53123727_53123874_53124072
transcript_41164.known	chr12	-	2806	16	FSM	ENSG00000139626.16	ENST00000267082.10	2806	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.52606975230128	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCTGTCACTTTGCTT	-1	True	NA	-5	True	AATAAA	-14	NA	53207251	53191322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53191637_53191858_53192020_53192329_53192539_53192690_53192911_53193139_53193364_53193707_53193902_53194197_53194345_53195373_53195464_53195625_53195722_53196040_53196200_53196578_53196821_53197492_53197664_53197749_53197952_53200242_53200447_53201071_53201195_53207201
transcript_41171.known	chr12	+	8557	7	FSM	ENSG00000139651.11	ENST00000416904.5	8557	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	2.98142396999972	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGCCCAGAGCAGAG	4	True	NA	NA	False	AATAAA	-22	NA	53180721	53195142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53180838_53181676_53181993_53184890_53185041_53185386_53185477_53185953_53186078_53186390_53186510_53187500
transcript_4118.known	chr1	+	2049	8	FSM	ENSG00000053372.5	ENST00000330263.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	22.8249773677157	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCCTCTTTTTTCTG	-9	True	NA	20	True	AGTAAA	-17	NA	19251804	19260128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_41196.nic	chr12	-	3266	10	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	213	0	intron_retention	FALSE	canonical	3	10	junction_9	102.132811138787	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	230	False	NA	-4	True	AATAAA	-15	NA	53231975	53210568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231390
transcript_41199.known	chr12	-	2917	10	FSM	ENSG00000172819.17	ENST00000425354.7	2917	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	97.2028552138691	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-4	True	NA	-4	True	AATAAA	-15	NA	53232209	53210568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973
transcript_41205.known	chr12	-	2640	9	FSM	ENSG00000172819.17	ENST00000394426.5	2640	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	110.601763096254	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGCTCCCTTTAGGA	NA	False	NA	-2	True	AATAAA	-17	NA	53232256	53210566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53231168_53231236_53231973
transcript_41209.known	chr12	-	1836	8	FSM	ENSG00000172819.17	ENST00000338561.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_7	50.13084919305	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGCTCTCTGAGAG	-10	True	NA	NA	False	NA	NA	NA	53220259	53211330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
transcript_41212.known	chr12	-	1779	7	FSM	ENSG00000172819.17	ENST00000543726.1	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	99.7374330708163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTAGACTTCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	53220413	53211392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53219949
transcript_41224.known	chr12	+	1763	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGATTTACTCATCC	-5	True	NA	15	True	AATAAA	-17	NA	53252094	53254406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53252269_53252817
transcript_41225.known	chr12	+	6618	31	FSM	ENSG00000135476.12	ENST00000257934.9	6618	31	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	41.7889007060753	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	-7	True	NA	16	True	AATAAA	-16	NA	53268298	53293638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53268378_53268754_53268848_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
transcript_41226.known	chr12	+	6665	31	FSM	ENSG00000135476.12	ENST00000552671.5	6665	31	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	47.9468339819105	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	1	True	NA	16	True	AATAAA	-16	NA	53268332	53293638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53268378_53268754_53268929_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
transcript_41228.nic	chr12	+	6675	31	NIC	ENSG00000135476.12	novel	6618	31	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	46.6791530914319	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	-1	True	NA	16	True	AATAAA	-16	NA	53268270	53293638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_53268407_53268754_53268848_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
transcript_41248.known	chr12	+	640	6	FSM	ENSG00000123349.15	ENST00000676468.1	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1372.78948131168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2831	False	NA	33	True	AATAAA	-21	NA	53295524	53299452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296218_53296276_53297849_53297925_53298044_53298151_53299268
transcript_41249.known	chr12	+	596	6	FSM	ENSG00000123349.15	ENST00000334478.9	596	6	0	0	0	0	multi-exon	FALSE	canonical	3	3061	junction_2	193.553506814007	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_41250.known	chr12	+	635	6	FSM	ENSG00000123349.15	ENST00000549759.2	635	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	1643.95279737589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGGTCTTTTCTTGG	2812	False	NA	28	True	AATAAA	-16	NA	53295505	53299447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296429_53296468_53297849_53297925_53298044_53298151_53299268
transcript_41254.known	chr12	+	564	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	1439.8522493645	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
transcript_41256.known	chr12	+	946	5	FSM	ENSG00000123349.15	ENST00000550069.2	946	5	0	0	0	0	multi-exon	TRUE	canonical	2	125	junction_3	1419.76635401745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAATGTTGGTCT	2785	False	NA	20	True	AATAAA	-8	NA	53295478	53299439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298048_53298151_53299268
transcript_41258.known	chr12	+	559	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1696.40045390232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
transcript_41259.known	chr12	+	528	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1509.53691160568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2815	False	NA	33	True	AATAAA	-21	NA	53295508	53299452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_41260.known	chr12	+	595	5	FSM	ENSG00000123349.15	ENST00000550880.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1695.89040035021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGTCTTTTCTT	2831	False	NA	26	True	AATAAA	-14	NA	53295524	53299445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53296429_53296552_53297849_53297925_53298044_53298151_53299268
transcript_41261.known	chr12	+	840	5	FSM	ENSG00000139637.14	ENST00000549488.5	840	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	179.828390417086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	62	False	NA	19	True	AATAAA	-20	NA	53300092	53307177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_41262.known	chr12	+	478	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	1369.65275404632	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2831	False	NA	31	True	AATAAA	-19	NA	53295524	53299450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
transcript_41263.known	chr12	+	392	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-15	True	NA	31	True	AATAAA	-19	NA	53295535	53299450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53298044_53298151_53299268
transcript_41264.known	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	44	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53299130_53300142
transcript_41265.known	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	22.5788740984921	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	-23	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_41266.known	chr12	+	2040	12	FSM	ENSG00000288663.1	ENST00000676940.1	2040	12	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_6	1472.77131808435	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCATCTCATACTGAC	2831	False	NA	0	True	AATAAA	-1	NA	53295524	53307158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_41267.known	chr12	+	988	6	FSM	ENSG00000139637.14	ENST00000548632.5	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	160.030747045685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	32	True	NA	13	True	AATAAA	-14	NA	53299749	53307171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53306197_53306321_53306679_53306862_53306965
transcript_41272.known	chr12	-	1815	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_15	51.3477901720761	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-25	True	NA	-8	True	AATAAA	-23	NA	53321610	53307459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_41273.nic	chr12	-	1715	16	NIC	ENSG00000094914.14	novel	1815	16	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	103.752568910633	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	7777	False	NA	-8	True	AATAAA	-23	NA	53321638	53307459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321470
transcript_41292.known	chr12	-	1703	15	FSM	ENSG00000094914.14	ENST00000394384.7	1703	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	104.591845196615	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTACCAGTCTGTCTTT	-11	True	NA	-7	True	AATAAA	-24	NA	53321596	53307458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_41313.known	chr12	-	1606	16	FSM	ENSG00000094914.14	ENST00000549450.6	1606	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	103.752568910633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTACCAGTCTGTCTTTT	20	True	NA	-6	True	AATAAA	-25	NA	53321257	53307457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321200
transcript_41314.known	chr12	+	7680	6	FSM	ENSG00000185591.10	ENST00000327443.9	7680	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	37.5158633114047	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTCTGGTGTATTGA	-9	True	NA	NA	False	AATAAA	-4	NA	53380175	53416446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53380299_53381658_53381814_53382109_53383623_53406584_53406754_53409361_53409562_53410926
transcript_41321.known	chr12	+	1814	15	FSM	ENSG00000197111.16	ENST00000359462.9	1814	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	251.510579158356	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTGGGTTTTATTCC	26	False	NA	51	True	AATAGA	-18	NA	53452128	53479832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_41323.known	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	229.199683459553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	265	False	NA	35	True	ATTAAA	-16	NA	53452367	53479614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_41326.known	chr12	-	4319	15	FSM	ENSG00000139625.13	ENST00000267079.6	4319	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	25.0542269031452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	7907	False	NA	NA	False	NA	NA	NA	53499615	53479668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487156_53487254_53487429_53499426
transcript_41331.known	chr12	+	3077	14	FSM	ENSG00000197111.16	ENST00000447282.5	3077	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	259.903281965294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	-1	True	NA	3	True	TATAAA	-14	NA	53452101	53481161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_41333.nic	chr12	+	1825	14	NIC	ENSG00000197111.16	novel	3159	15	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	221	junction_11	230.811329493344	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCACAGTGATTCATGTG	9376	False	NA	40	True	ATTAAA	-39	NA	53452055	53479821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_41335.known	chr12	+	1730	14	FSM	ENSG00000197111.16	ENST00000359282.9	1730	14	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	213.759556345428	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGATTCATGTGGGTTT	-1	True	NA	45	True	ATTAAA	-44	NA	53452101	53479826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_41340.known	chr12	-	4261	14	FSM	ENSG00000139625.13	ENST00000547488.6	4261	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	21.4600220032203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	11	True	NA	NA	False	NA	NA	NA	53499458	53479668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487429_53499426
transcript_41343.known	chr12	+	1619	13	FSM	ENSG00000197111.16	ENST00000549863.5	1619	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	291.709044540389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAATTAAAAGATGG	23	False	NA	-12	True	AATACA	-33	NA	53452125	53479769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_41345.known	chr12	+	3026	13	FSM	ENSG00000197111.16	ENST00000437231.5	3026	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_10	239.188384612074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	-1	True	NA	3	True	TATAAA	-14	NA	53452101	53481161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_41353.known	chr12	+	1105	4	FSM	ENSG00000205352.11	ENST00000429243.7	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	1521	junction_1	282.673348977618	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	-3	True	NA	36	True	AATAAA	-20	NA	53441733	53446638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53446014
transcript_41354.known	chr12	+	927	4	FSM	ENSG00000205352.11	ENST00000379786.8	927	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	816.250097839028	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	-2	True	NA	36	True	AATAAA	-20	NA	53441761	53446638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443540_53443774_53446014
transcript_41355.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549068.5	755	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	840.144035270143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCAGGCCTTTTGTTG	8	True	NA	-51	True	AATACA	-3	NA	53441744	53446475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443566_53443774_53446014
transcript_41356.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549135.1	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	921.787755758703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAATGTTGAAGACAAG	600	False	NA	5	True	AATGAA	-33	NA	53442554	53446315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53442587_53442694_53442734_53443390_53443774_53446014
transcript_41357.known	chr12	+	786	3	FSM	ENSG00000205352.11	ENST00000549740.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	1521	junction_1	340	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGACACGCCCACTGACA	10	True	NA	NA	False	NA	NA	NA	53441746	53444091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443390
transcript_41362.known	chr12	+	1418	12	FSM	ENSG00000197111.16	ENST00000552819.5	1418	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	285.763671646796	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGATTCATGTGGGT	-1	True	NA	43	True	ATTAAA	-42	NA	53454733	53479824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_41363.known	chr12	+	1202	13	FSM	ENSG00000197111.16	ENST00000548933.5	1202	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	260.241914699894	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTGTTGATGCTGAGA	3	True	NA	41	True	ATTAAA	-22	NA	53454784	53479620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_41367.known	chr12	+	1514	9	FSM	ENSG00000139546.11	ENST00000549572.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	148.814849309469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGCCCTTCTCTTC	2	True	NA	14	True	AATAAA	-16	NA	53501603	53506423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_41368.known	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	110.236606329295	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	17	True	NA	3	True	AATAAA	-5	NA	53501618	53506412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_41369.known	chr12	+	1466	9	FSM	ENSG00000139546.11	ENST00000549679.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	156.967353293607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	3	True	NA	-13	True	AATGAA	-22	NA	53501604	53506396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503213_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_41370.nic	chr12	+	1345	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	122.294725969684	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-36	True	NA	22	True	AATAAA	-24	NA	53501277	53506431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_53501462_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_41391.known	chr12	+	916	6	FSM	ENSG00000139546.11	ENST00000552857.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	198.305824422784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCTGTGGGTGCCATC	-40	True	NA	NA	False	NA	NA	NA	53501273	53506229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501462_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_41397.known	chr12	+	1510	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	46.0365004643055	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-31	True	NA	22	True	AATAAA	-24	NA	53501282	53506431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_41400.known	chr12	-	6660	12	FSM	ENSG00000170653.19	ENST00000420353.7	6660	12	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_8	42.1047493444074	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTCTGATGCTTCACT	-15	True	NA	-3	True	ATTAAA	-18	NA	53626382	53512053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53626278
transcript_41401.known	chr12	-	5218	12	FSM	ENSG00000170653.19	ENST00000456903.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_11	43.3871672386172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGACTCCCTCCACCCC	-4	True	NA	NA	False	NA	NA	NA	53626000	53513441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53625950
transcript_41404.known	chr12	-	774	4	FSM	ENSG00000170653.19	ENST00000548118.6	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	64.8553947040816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	0	True	NA	-2	True	AATAAA	-21	NA	53625996	53542886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53625950
transcript_41405.known	chr12	-	860	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	20.0055547841649	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-43	True	NA	-2	True	AATAAA	-21	NA	53626410	53542886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
transcript_41406.known	chr12	-	379	2	FSM	ENSG00000170653.19	ENST00000589726.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATTCTACTGGTGTTT	-20	True	NA	NA	False	AATGAA	-23	NA	53626387	53600751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53601022_53626278
transcript_41409.nnic	chr12	-	797	4	NIC	ENSG00000135390.21	novel	632	5	NA	NA	80	0	combination_of_known_splicesites	FALSE	canonical	3	177	junction_3	2120.10083617633	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	12	True	NA	-9	True	AATAAA	-17	NA	53676318	53665169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53665429_53669147_53669342_53669870_53669949_53676052
transcript_41410.known	chr12	-	632	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	3190	junction_4	636.61703558733	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	10	True	NA	-9	True	AATAAA	-17	NA	53676083	53665169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
transcript_41412.known	chr12	-	5576	15	FSM	ENSG00000012822.16	ENST00000550804.6	5576	15	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	12.9638429676464	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGCCATGTGTTGCTT	-2	True	NA	NA	False	AATAAA	-20	NA	53727452	53708516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53712122_53713099_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_41415.nic	chr12	-	4166	13	NIC	ENSG00000012822.16	novel	3888	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	82	junction_2	11.6141675934562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTGTAGTTTGAACA	10	False	NA	-54	True	AATAAA	-19	NA	53727474	53711158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53713207_53713700_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_41417.known	chr12	-	733	2	FSM	ENSG00000012822.16	ENST00000546774.1	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGGCTCAGAAACATTAA	-2	True	NA	NA	False	NA	NA	NA	53727452	53724582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53725267_53727403
transcript_41419.known	chr12	-	2119	6	FSM	ENSG00000123415.16	ENST00000513838.5	2119	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	82.7357238440566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	158	False	NA	-1	True	AATAAA	-29	NA	54188957	54180357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188510_54188597_54188725
transcript_41429.known	chr12	-	926	5	FSM	ENSG00000123415.16	ENST00000514685.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	80.6113360514512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	175	False	NA	-16	True	AATAAA	-34	NA	54188940	54181452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188720
transcript_41430.nic	chr12	-	727	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	72.0208303201234	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCTCATCTGTAAAACA	-8	True	NA	-34	True	AATAAA	-16	NA	54188989	54181470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188950
transcript_41433.known	chr12	-	1571	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	82.192186706253	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	7	True	NA	-31	True	AATAAA	-19	NA	54188974	54181467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
transcript_41439.known	chr12	-	465	4	FSM	ENSG00000123415.16	ENST00000507904.5	465	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	103.964737611686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTGGGGCCTGTGCT	-9	True	NA	NA	False	NA	NA	NA	54188990	54182584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54182624_54183655_54183960_54188514_54188597_54188950
transcript_41440.known	chr12	-	627	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	73.8120736886739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCTCATCTGTAAAACA	5	True	NA	-34	True	AATAAA	-16	NA	54188976	54181470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
transcript_41442.known	chr12	-	1697	3	FSM	ENSG00000123415.16	ENST00000508394.6	1697	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	86.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAGAGAGTCTGGGCTT	-13	True	NA	NA	False	NA	NA	NA	54188994	54181274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54182624_54183655_54183960_54188950
transcript_41449.known	chr12	+	3744	11	FSM	ENSG00000135486.19	ENST00000340913.11	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_8	5148.18032318216	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	8	True	NA	41	True	AATAAA	-15	NA	54280725	54287087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
transcript_41451.known	chr12	+	1234	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	5555.80178642111	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	-1	True	NA	42	True	AATAAA	-16	NA	54280747	54287088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
transcript_41456.known	chr12	+	2278	10	FSM	ENSG00000135486.19	ENST00000677249.1	2278	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4654.32250974203	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	NA	False	NA	38	True	NA	NA	NA	54280690	54285745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282663_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_41465.known	chr12	+	1232	9	FSM	ENSG00000111481.10	ENST00000549043.5	1232	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	407.95907806421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGGACAACATGGAAG	-8	True	NA	NA	False	NA	NA	NA	54325128	54351102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54340462_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_41469.known	chr12	+	880	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	358.973707183381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	2	True	NA	51	True	NA	NA	NA	54325138	54350913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_41477.known	chr12	-	894	5	FSM	ENSG00000094916.16	ENST00000550411.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	169.322916346252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGGATGGTCTCTGTC	35	True	NA	NA	False	AAGAAA	-15	NA	54259545	54241754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
transcript_41478.known	chr12	-	1832	5	FSM	ENSG00000094916.16	ENST00000439541.6	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	146.289097338113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTACCACCAAGAGT	-12	True	NA	NA	False	NA	NA	NA	54259592	54240624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
transcript_41479.known	chr12	-	11546	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	39.0600499231632	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTGGTGGTTTAA	-8	True	NA	-22	True	AATAAA	-20	NA	54280122	54230941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
transcript_41488.known	chr12	-	1523	4	FSM	ENSG00000123405.14	ENST00000553070.5	1523	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.0830459735946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCCAGAGGGGTGGAA	-18	True	NA	NA	False	NA	NA	NA	54301015	54292373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54293382_54295134_54295305_54300146_54300277_54300800
transcript_41494.nic	chr12	-	401	3	ISM	ENSG00000094916.16	ENST00000209875.9	11546	5	-38	21217	-27	-68	5prime_fragment	FALSE	canonical	3	340	junction_2	49	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAAGAAGATGAAGGAGG	NA	False	NA	-7	True	NA	NA	NA	54280160	54252158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_54252228_54257513_54257693_54280007
transcript_41495.known	chr12	-	1656	3	FSM	ENSG00000123405.14	ENST00000435572.7	1656	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCACTGTGTCTTC	-18	True	NA	-5	True	TATAAA	-15	NA	54301015	54292110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54293382_54295134_54295305_54300800
transcript_41496.known	chr12	-	2627	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATTAAACATTTTT	-19	True	NA	NA	False	AATAAA	-29	NA	54280133	54271840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54274342_54280007
transcript_41498.known	chr12	+	1811	10	FSM	ENSG00000135486.19	ENST00000677375.1	1811	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	4590.32237497246	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTCTCTTGAATGA	NA	False	NA	-3	True	AATAAA	-2	NA	54280662	54285229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284239_54284318_54284548
transcript_41499.known	chr12	+	1890	9	FSM	ENSG00000111481.10	ENST00000262061.7	1890	9	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	171.870409029594	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGTTTC	-6	True	NA	14	True	AATAAA	-15	NA	54325130	54351846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_41500.known	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	3	True	NA	5	True	NA	NA	NA	54285906	54287051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54286733_54286952
transcript_41501.known	chr12	+	372	3	FSM	ENSG00000135486.19	ENST00000551803.1	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	43	False	NA	41	True	AATAAA	-15	NA	54285946	54287087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54286113_54286661_54286733_54286952
transcript_41502.known	chr12	+	736	7	FSM	ENSG00000111481.10	ENST00000549116.5	736	7	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	447.897836813511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGTGTTTTCCTCCCT	7	True	NA	17	True	ATTAAA	-16	NA	54325143	54350879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54340546_54340616_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_41503.known	chr12	-	2494	9	FSM	ENSG00000161642.18	ENST00000546970.5	2494	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	31.4282416784649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTCTGCCCTCCGCC	-8	True	NA	-25	True	AATAAA	-6	NA	54385768	54369152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54384858_54385003_54385672
transcript_41504.known	chr12	-	2369	8	FSM	ENSG00000161642.18	ENST00000551109.5	2369	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	21.629533852903	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGACTCAGACTCTGTCT	-7	True	NA	-5	True	AATAAA	-26	NA	54385767	54369132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54385672
transcript_41505.known	chr12	-	2331	8	FSM	ENSG00000161642.18	ENST00000338010.9	2331	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	17.7338601527803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCCCCTAGACTCAGAC	16	True	NA	-12	True	AATAAA	-19	NA	54391298	54369139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54391234
transcript_41506.known	chr12	-	2076	7	FSM	ENSG00000161642.18	ENST00000352268.10	2076	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	29.6760284854066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGACTCAGACTCTGT	-2	True	NA	-7	True	AATAAA	-24	NA	54391281	54369134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54373972_54374136_54375843_54375955_54384427_54384565_54391234
transcript_41508.known	chr12	-	4250	30	FSM	ENSG00000161638.11	ENST00000293379.9	4250	30	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_15	17.9534342847248	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCTCATGTTACTC	-1	True	NA	-6	True	AATAAA	-35	NA	54419266	54395260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54396377_54397364_54397488_54398596_54398699_54399644_54399759_54399863_54399948_54400845_54400996_54401372_54401479_54401584_54401666_54401775_54401856_54402000_54402094_54402179_54402331_54402982_54403051_54403186_54403325_54403624_54403780_54403910_54403967_54404144_54404247_54404429_54404476_54404702_54404895_54405165_54405375_54405663_54405717_54405869_54405927_54407648_54407693_54407831_54407877_54408109_54408236_54408755_54408802_54408892_54408955_54409231_54409353_54409484_54409598_54411833_54411965_54418980
transcript_4153.known	chr1	-	1360	7	FSM	ENSG00000053371.13	ENST00000235835.8	1360	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	24.9443825784929	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTCTCTGCTGTTAA	-34	True	NA	-5	True	NA	NA	NA	19312144	19303964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308157_19308263_19308454_19308643_19311826
transcript_41533.known	chr12	+	3193	16	FSM	ENSG00000123360.12	ENST00000243052.8	3193	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	1.87853370714738	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTGTGTGTTCACT	-29	True	NA	4	True	AATAAA	-15	NA	54549600	54579239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54549773_54549859_54549986_54566973_54567088_54569183_54569367_54569545_54569613_54570240_54570358_54572600_54572742_54573147_54573249_54573354_54573481_54573607_54573710_54575097_54575219_54575550_54575633_54575991_54576101_54576570_54576702_54577224_54577346_54577859
transcript_41536.known	chr12	-	1828	7	FSM	ENSG00000135447.17	ENST00000257905.13	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	25.660713595343	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGCCTGGTCTCCCTTC	-3	True	NA	-12	True	NA	NA	NA	54588659	54579245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54580393_54580943_54581051_54581975_54582132_54582731_54582796_54583210_54583249_54584259_54584321_54588404
transcript_41548.nnic	chr12	-	4273	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-326	2053	multi-exon	TRUE	canonical	3	721	junction_1	975	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACATCACTGGAGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	55415113	55409673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr12_-_55410605_55411720_55414512_55414562
transcript_41551.nnic	chr12	-	5077	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-164	2053	multi-exon	FALSE	non_canonical	3	284	junction_1	1193.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACATCACTGGAGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	55414951	55409673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr12_-_55414281_55414430_55414512_55414562
transcript_4156.known	chr1	-	1171	6	FSM	ENSG00000053371.13	ENST00000330072.9	1171	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	112.555053196203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTAGCCTAGGTCTTGA	16	True	NA	-39	True	AATAAA	-16	NA	19312094	19303998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308454_19308643_19311826
transcript_41564.known	chr12	-	3930	26	FSM	ENSG00000135424.19	ENST00000555728.5	3930	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	29.9305863624487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGAGGAGGTTGTGTC	5142	False	NA	NA	False	NA	NA	NA	55707711	55684702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697069_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55699869_55699990_55700261_55700394_55700898_55701155_55702871_55702952_55703050_55703179_55707476
transcript_41573.known	chr12	-	4084	25	FSM	ENSG00000135424.19	ENST00000347027.10	4084	25	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_21	29.6834865708191	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCTGCCTCTTTGAG	5	True	NA	NA	False	ATTAAA	-15	NA	55707884	55684571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697051_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55699869_55699990_55700898_55701155_55702871_55702952_55703050_55703179_55707476
transcript_41575.known	chr12	-	4138	25	FSM	ENSG00000135424.19	ENST00000553804.6	4138	25	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_20	29.4843414186054	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCTCTTTGAGTCTT	-15	True	NA	NA	False	ATTAAA	-19	NA	55707904	55684567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697069_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55700261_55700394_55700898_55701155_55702871_55702952_55703050_55703179_55707476
transcript_41610.known	chr12	+	571	4	FSM	ENSG00000135441.8	ENST00000548925.6	562	4	-9	0	-1	0	multi-exon	FALSE	canonical	3	845	junction_1	109.393276250823	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	-19	True	NA	16	True	AATAAA	-16	NA	55716036	55719703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55719498
transcript_41611.known	chr12	+	3382	4	FSM	ENSG00000258311.5	ENST00000550412.5	3382	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	456.657420830977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGACCCCATTTAAGT	-20	True	NA	10	True	AATAAA	-30	NA	55716035	55724703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55721688
transcript_41613.known	chr12	+	837	4	FSM	ENSG00000135441.8	ENST00000547076.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	381.811762812806	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	67	False	NA	16	True	AATAAA	-16	NA	55716291	55719703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55716932_55717006_55719090_55719224_55719498
transcript_41617.known	chr12	+	1229	3	FSM	ENSG00000135441.8	ENST00000549147.1	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_1	123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGGGGGCACTTCA	-18	True	NA	NA	False	NA	NA	NA	55716037	55720087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55716932_55717006_55719090
transcript_41620.known	chr12	+	421	3	FSM	ENSG00000135441.8	ENST00000553100.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	516.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGCCTTGAATAAAAC	25	True	NA	-17	True	NA	NA	NA	55716080	55719670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55719090_55719224_55719498
transcript_41621.known	chr12	+	531	3	FSM	ENSG00000135441.8	ENST00000551926.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	412.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAGTGTCAGAAAAGGTA	22	True	NA	NA	False	NA	NA	NA	55716512	55719343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55716932_55717006_55719090
transcript_41624.known	chr12	+	525	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	490.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	40	False	NA	16	True	AATAAA	-16	NA	55716530	55719703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55719090_55719224_55719498
transcript_41625.known	chr12	+	367	3	FSM	ENSG00000258311.5	ENST00000549424.1	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCGGGGTCACCCTTG	38	False	NA	NA	False	NA	NA	NA	55716589	55721794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55719090_55719224_55721688
transcript_41627.known	chr12	+	1316	2	FSM	ENSG00000170439.8	ENST00000394252.4	1316	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGACTGATGGCAGCA	-3	True	NA	16	True	AATAAA	-18	NA	55681735	55684611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55682253_55683812
transcript_41631.known	chr12	+	1368	3	NNC	ENSG00000170439.8	novel	1316	2	NA	NA	-58	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	12.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACTAGACTGATGGCA	11	False	NA	13	True	AATAAA	-15	NA	55681677	55684608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_55682253_55683812_55684047_55684049
transcript_41645.known	chr12	-	981	8	FSM	ENSG00000135404.12	ENST00000420846.7	981	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	1226.82828164868	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	8	True	NA	-2	True	NA	NA	NA	55728650	55725442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728515
transcript_41647.known	chr12	-	1023	8	FSM	ENSG00000135404.12	ENST00000257857.9	1023	8	0	0	0	0	multi-exon	FALSE	canonical	3	3268	junction_7	187.528174753904	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGCAGTGGGAGAAG	-1	True	NA	NA	False	NA	NA	NA	55729009	55725322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728952
transcript_41648.known	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	1195.93800603782	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
transcript_41666.known	chr12	+	1443	2	FSM	ENSG00000258056.3	ENST00000552576.3	1458	2	10	5	10	-5	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTTTTCCTCTTTTT	-6	True	NA	30	True	NA	NA	NA	55729103	55730852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55729356_55729661
transcript_41668.known	chr12	-	829	8	FSM	ENSG00000135404.12	ENST00000550050.5	829	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1250.78726229132	2422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAATTAAACGGATTA	8	True	NA	-66	True	NA	NA	NA	55729000	55725506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727150_55727340_55728275_55728353_55728952
transcript_41669.known	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	3351	junction_3	166.505672242386	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	1193	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
transcript_41672.known	chr12	-	1163	12	FSM	ENSG00000205323.9	ENST00000546604.5	1163	12	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	725.252478123855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGGTAGGGAGGAACA	-8	True	NA	NA	False	NA	NA	NA	55817724	55752462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_41673.known	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2262	junction_1	156.243399860602	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-8	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_41676.nnic	chr12	-	838	9	NIC	ENSG00000205323.9	novel	898	11	NA	NA	-40	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	876.035521183359	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAATGTGTTTTATTA	NA	False	NA	-16	True	AATAAA	-14	NA	55817764	55757274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_55757554_55760550_55760641_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_41677.known	chr12	-	1813	9	FSM	ENSG00000123342.16	ENST00000548629.5	1813	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.53722289127305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCCCTAACTTAGATTT	4164	False	NA	NA	False	NA	NA	NA	55842950	55836800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55837375_55837554_55837683_55837842_55838008_55838605_55838735_55839495_55839742_55840666_55840814_55841105_55841237_55842352_55842439_55842743
transcript_41679.known	chr12	-	3236	9	FSM	ENSG00000123342.16	ENST00000322569.9	3236	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.61904085496962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGGCGTCTG	0	True	NA	NA	False	AATAAA	-17	NA	55842936	55835432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55837375_55837554_55837683_55837842_55838008_55838605_55838735_55839495_55839742_55840666_55840883_55841105_55841237_55842352_55842439_55842743
transcript_4168.known	chr1	+	1805	9	FSM	ENSG00000040487.13	ENST00000375155.7	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	16.7760990698076	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	11	True	NA	25	True	AATAAA	-34	NA	19312325	19329300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_41684.known	chr12	-	3618	7	FSM	ENSG00000135392.19	ENST00000546957.2	3618	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	76.2111467495988	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTATCTTCCCTCTTT	-11	True	NA	-7	True	TATAAA	-13	NA	55829603	55820986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829140
transcript_41685.known	chr12	-	2774	7	FSM	ENSG00000135392.19	ENST00000317287.5	2774	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	88.1017404292711	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGCTGGGATTACAGG	6669	False	NA	NA	False	NA	NA	NA	55830558	55821750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55830175
transcript_41686.known	chr12	-	3284	7	FSM	ENSG00000135392.19	ENST00000547445.2	3284	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	88.4734737396218	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTATCTTCCCTCTTT	6403	False	NA	-7	True	TATAAA	-13	NA	55830824	55820986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55830695
transcript_41695.known	chr12	+	1958	5	FSM	ENSG00000182796.15	ENST00000471276.5	1958	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.9716671445203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	17	True	NA	5	True	AATAAA	-19	NA	55830853	55836246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55831256_55831350_55832870_55833015_55833446_55833542_55834850
transcript_41696.known	chr12	+	884	5	FSM	ENSG00000182796.15	ENST00000636428.1	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	24.3156328315757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAATTGACTCCCGAA	-9	True	NA	NA	False	AATAGA	-15	NA	55830827	55835234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55831256_55831350_55832958_55833015_55833446_55833542_55834850
transcript_41703.known	chr12	+	2019	4	FSM	ENSG00000123353.10	ENST00000243045.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	37.0435179514881	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGTGTTGGGGGAG	-13	True	NA	NA	False	AATAAA	-15	NA	55818040	55821879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55818113_55818998_55819174_55819341_55819494_55820259
transcript_41706.known	chr12	+	2313	4	FSM	ENSG00000182796.15	ENST00000508246.6	2313	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	24.5266295188629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	4	True	NA	3	True	AATAAA	-17	NA	55830840	55836244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850
transcript_41707.known	chr12	+	2924	5	FSM	ENSG00000182796.15	ENST00000478241.6	2924	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.3510708213071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	NA	False	NA	3	True	AATAAA	-17	NA	55829607	55836244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55829826_55829959_55831084_55831256_55831350_55833446_55833542_55834850
transcript_41708.known	chr12	+	593	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	27.5358352374178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	2	True	NA	NA	False	NA	NA	NA	55830838	55835047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
transcript_41709.known	chr12	+	575	4	FSM	ENSG00000182796.15	ENST00000637951.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	31.2552217859494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTACCCCTGTGAGGGCC	4	True	NA	NA	False	NA	NA	NA	55830840	55835007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55832958_55833039_55833446_55833542_55834850
transcript_4171.nic	chr1	+	1902	9	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	29.0247739009282	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	NA	False	NA	9	True	AATAAA	-18	NA	19312181	19329284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_41715.known	chr12	+	2230	3	FSM	ENSG00000182796.15	ENST00000482378.6	2230	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	27	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	-4	True	NA	5	True	AATAAA	-19	NA	55830832	55836246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55832958_55833542_55834850
transcript_41716.known	chr12	-	3416	8	FSM	ENSG00000135392.19	ENST00000357606.7	3416	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	85.576079053217	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGCCGGAGCCCTTTTT	1	True	NA	20	True	TATAAA	-40	NA	55830781	55820959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488_55829637_55830695
transcript_41717.known	chr12	-	3256	7	FSM	ENSG00000135392.19	ENST00000678005.2	3256	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_6	22.7961985134949	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	5	True	NA	-5	True	TATAAA	-15	NA	55829587	55820984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488
transcript_41718.known	chr12	+	1258	4	FSM	ENSG00000135414.10	ENST00000546799.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	13.0639452948436	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCCTTTTCCTTG	92	False	NA	2	True	AATAAA	-15	NA	55743398	55757127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55743762_55748585_55748984_55749501_55749884_55757012
transcript_41719.known	chr12	+	2727	24	FSM	ENSG00000065357.20	ENST00000331886.10	2727	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	9.4522979072704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	-12	True	NA	24	True	AATAAA	-33	NA	55931161	55954023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55931345_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_41722.nic	chr12	+	2658	24	NIC	ENSG00000065357.20	novel	2770	24	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	9.74417571180125	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTGGTACACTTCCT	556	False	NA	22	True	AATAAA	-31	NA	55932007	55954021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_55932124_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_41723.known	chr12	+	2770	24	FSM	ENSG00000065357.20	ENST00000394147.5	2770	24	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	10.7819074105748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTGGTACACTTCCT	576	False	NA	22	True	AATAAA	-31	NA	55932027	55954021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55932256_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_41732.known	chr12	-	890	4	FSM	ENSG00000170473.17	ENST00000302533.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	356.545462271877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGGACTTTCCCCC	10	True	NA	NA	False	NA	NA	NA	55927111	55901686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55902356_55903386_55903481_55914275_55914367_55927075
transcript_41733.nic	chr12	-	1311	4	NIC	ENSG00000170473.17	novel	890	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	344.401897013746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGCCTCCTTATTT	-9	True	NA	-15	True	AATAAA	-16	NA	55927908	55901413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_55902356_55903386_55903481_55914275_55914367_55927724
transcript_41735.known	chr12	-	1207	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	43	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGCCTCCTTATTTT	5	True	NA	-14	True	AATAAA	-17	NA	55927894	55901412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55902356_55903386_55903481_55927724
transcript_41737.known	chr12	-	653	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTCACTGTTTTG	4873	False	NA	64	True	ATTAAA	-1	NA	55927756	55913745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55914367_55927724
transcript_41739.known	chr12	-	1073	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	337	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGCCTCCTTATTT	9	True	NA	-15	True	AATAAA	-16	NA	55927112	55901413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55902356_55903386_55903481_55927075
transcript_41741.nic	chr12	-	2049	12	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_6	219.988617286298	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	8027	False	NA	-4	True	AATAAA	-15	NA	55966091	55954104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_41742.nic	chr12	-	2021	12	NIC	ENSG00000185664.15	novel	2127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	316.219847156274	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-2	True	NA	-4	True	AATAAA	-15	NA	55966042	55954104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_41746.known	chr12	-	2126	11	FSM	ENSG00000185664.15	ENST00000548747.6	2126	11	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_8	77.6443172421524	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-2	True	NA	-4	True	AATAAA	-15	NA	55966042	55954104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_41748.known	chr12	-	2127	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	270.894518216962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	8096	False	NA	-4	True	AATAAA	-15	NA	55966022	55954104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_4176.nic	chr1	+	2761	8	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-144	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	31.5219392338293	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACCTGCTTCTGTTGCT	NA	False	NA	22	True	AATAAA	-31	NA	19312181	19329297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327570
transcript_41761.known	chr12	-	1867	9	FSM	ENSG00000185664.15	ENST00000550464.5	1867	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	300.622271297387	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	-2	True	NA	-5	True	AATAAA	-14	NA	55966042	55954105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55965935
transcript_41766.known	chr12	+	2240	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_6	23.2050042495627	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	-7	True	NA	24	True	ATTAAA	-26	NA	55966829	55972789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
transcript_41770.known	chr12	+	1260	6	FSM	ENSG00000123374.11	ENST00000354056.4	1260	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	122.886939908194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTACACGTTAGATT	-6	True	NA	NA	False	TATAAA	-16	NA	55966830	55971912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55971043_55971248_55971520
transcript_41773.known	chr12	+	1031	5	FSM	ENSG00000123374.11	ENST00000440311.6	1031	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	148.580786106414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACTCTGGGAATACAGG	-7	True	NA	NA	False	NA	NA	NA	55966829	55971760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55967125_55968048_55968170_55968777_55968949_55971043_55971248_55971520
transcript_41774.nic	chr12	+	3424	7	NIC	ENSG00000111540.16	novel	5273	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	228.486809733565	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	108	False	NA	8	True	AGTAAA	-19	NA	55974052	55994706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_55974140_55979371_55979475_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_41777.known	chr12	+	3322	6	FSM	ENSG00000111540.16	ENST00000553116.5	3322	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	201.727539022316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	50	False	NA	8	True	AGTAAA	-19	NA	55973912	55994706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974001_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_41778.known	chr12	+	5273	6	FSM	ENSG00000111540.16	ENST00000360299.10	5273	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	90.3269616449042	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTGTTTCATTTTTG	-7	True	NA	13	True	AATAAA	-14	NA	55974077	55996683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_41779.nnic	chr12	+	3515	6	NNC	ENSG00000111540.16	novel	5273	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	186.668261897946	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	114	False	NA	8	True	AGTAAA	-19	NA	55974058	55994706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_55974340_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_41782.known	chr12	+	1530	5	FSM	ENSG00000111540.16	ENST00000448789.2	1530	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	195.99027399338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCATCCTCTGATTTAT	16	True	NA	NA	False	NA	NA	NA	55974100	55993086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55991359_55991454_55992096
transcript_41783.known	chr12	+	3148	5	FSM	ENSG00000111540.16	ENST00000549505.5	3148	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	213.754970702438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	-11	True	NA	8	True	AGTAAA	-19	NA	55974073	55994706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974140_55986868_55987124_55990681_55990805_55991359_55991454_55992096
transcript_41787.known	chr12	+	2394	6	FSM	ENSG00000139531.13	ENST00000394115.6	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	55.9127892346644	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTACTTTTCTAATAAAT	0	True	NA	-28	True	NA	NA	NA	55997287	56005486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55997614_55997724_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_41789.nic	chr12	+	2378	6	NIC	ENSG00000139531.13	novel	2319	5	NA	NA	4	0	intron_retention	FALSE	canonical	1	1	junction_2	66.6681333172004	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	-8	True	NA	11	True	AATAAA	-21	NA	55997279	56005525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_55997340_55997614_55997724_56001885_56001949_56002211_56002272_56002542_56002721_56003617
transcript_41790.known	chr12	+	2319	5	FSM	ENSG00000139531.13	ENST00000266971.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	42.3696530549874	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	-12	True	NA	11	True	AATAAA	-21	NA	55997275	56005525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002542_56002721_56003617
transcript_41791.known	chr12	+	613	5	FSM	ENSG00000139531.13	ENST00000550478.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.0195278452077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTGTACGTCACCCAGC	31	True	NA	NA	False	NA	NA	NA	55997318	56003923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002603_56002721_56003617
transcript_41792.known	chr12	+	543	5	FSM	ENSG00000139531.13	ENST00000552258.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	72.2923751166055	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAAGCTGATGCTAGC	8	True	NA	NA	False	NA	NA	NA	55997295	56003752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_41795.known	chr12	+	2306	4	FSM	ENSG00000139531.13	ENST00000356124.8	2306	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	62.6968012652072	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	1165	False	NA	11	True	AATAAA	-21	NA	55997179	56005525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_56002211_56002272_56002542_56002721_56003617
transcript_41801.known	chr12	+	623	5	FSM	ENSG00000197728.11	ENST00000552361.1	623	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4951.4591978022	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	9	False	NA	17	True	AATAAA	-18	NA	56041892	56044223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56042065_56042132_56042170_56042424_56042603_56043362_56043494_56044118
transcript_41802.known	chr12	+	1140	4	FSM	ENSG00000197728.11	ENST00000646449.2	1140	4	0	0	0	0	multi-exon	FALSE	canonical	3	8340	junction_1	2073.62104113124	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGTGAAATGGAGAT	-12	True	NA	NA	False	ATTAAA	-39	NA	56041917	56044697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56042170_56042424_56042603_56043362_56043494_56044118
transcript_41804.known	chr12	+	1204	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	8340	junction_1	958.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	15	True	NA	17	True	AATAAA	-18	NA	56042139	56044223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56042170_56042424_56043494_56044118
transcript_41807.known	chr12	+	5615	28	FSM	ENSG00000065361.17	ENST00000267101.8	5615	28	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	19.3372353093753	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTGTCTGTCAAATGA	-18	True	NA	19	True	AATAAA	-21	NA	56080164	56103505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_41809.known	chr12	+	5439	28	FSM	ENSG00000065361.17	ENST00000683059.1	5439	28	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	27.5053305720281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAAAGTTTTTTTTCAG	3	True	NA	0	True	AATAAA	-2	NA	56079873	56103486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56079935_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_41815.known	chr12	+	2386	13	FSM	ENSG00000170515.14	ENST00000303305.11	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_12	52.7973063285956	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGTATGCTGCTCT	-20	True	NA	18	True	AATAAA	-21	NA	56104558	56113910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475_56111530_56112822
transcript_4182.known	chr1	+	1548	8	FSM	ENSG00000040487.13	ENST00000400548.6	1548	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	33.3589017584604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	26	False	NA	25	True	AATAAA	-34	NA	19312340	19329300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_41821.nic	chr12	+	1465	12	ISM	ENSG00000170515.14	ENST00000303305.11	2386	13	-187	2401	-165	0	5prime_fragment	FALSE	canonical	3	1511	junction_5	48.8357002594896	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAAAAGAAG	81	False	NA	NA	False	NA	NA	NA	56104371	56111509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475
transcript_41827.known	chr12	+	1027	3	FSM	ENSG00000065361.17	ENST00000411731.6	1027	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGTGCGCACCTGTA	5	True	NA	14	True	AATAAA	-23	NA	56080136	56085623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56080383_56083750_56083903_56084994
transcript_41828.nic	chr12	+	379	2	ISM	ENSG00000170515.14	ENST00000552766.5	1085	10	0	7230	0	-542	5prime_fragment	FALSE	canonical	3	1524	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGGAAAATCTTCAAGAAA	-42	True	NA	NA	False	AAGAAA	-1	NA	56104536	56106677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_56104826_56106587
transcript_41829.nic	chr12	+	660	2	ISM	ENSG00000170515.14	ENST00000552766.5	1085	10	-228	7177	-228	-489	5prime_fragment	FALSE	canonical	3	1524	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCACTAATTTTCCGTT	18	False	NA	NA	False	AAGAAA	-34	NA	56104308	56106730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_56104826_56106587
transcript_41830.known	chr12	+	469	4	FSM	ENSG00000229117.9	ENST00000501597.3	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	5052	junction_1	7259.61243226294	6884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	0	True	NA	11	True	AATAAA	-38	NA	56116589	56117832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116660_56116774_56116800_56117188_56117212_56117481
transcript_41831.known	chr12	+	335	4	FSM	ENSG00000229117.9	ENST00000546485.5	335	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	9715.9498077474	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGTCCTCTGCCCTG	-1	True	NA	NA	False	CATAAA	-10	NA	56116631	56117710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116660_56116774_56116830_56117188_56117212_56117481
transcript_41832.nnic	chr12	+	510	4	NNC	ENSG00000229117.9	novel	469	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9776.80426087971	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	4	True	NA	11	True	AATAAA	-38	NA	56116612	56117832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_56116660_56116774_56116864_56117188_56117212_56117481
transcript_41833.known	chr12	+	551	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	9695.56098886954	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	0	True	NA	5	True	AATAAA	-32	NA	56116632	56117826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
transcript_41836.known	chr12	+	676	3	FSM	ENSG00000229117.9	ENST00000546591.6	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	12955	junction_1	4922	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTGGAGTTGGATGGG	0	True	NA	45	True	TATAAA	-34	NA	56116632	56117967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116800_56117188_56117212_56117481
transcript_41837.known	chr12	+	4180	31	FSM	ENSG00000139641.13	ENST00000394048.10	4180	31	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_18	45.0552870248197	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTCTTTTCCTTAA	6	True	NA	17	True	ATTAAA	-17	NA	56128266	56144674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134109_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_4184.known	chr1	+	1512	8	FSM	ENSG00000040487.13	ENST00000469076.5	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	37.6210969905917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	15	True	NA	9	True	AATAAA	-18	NA	19312329	19329284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_41846.known	chr12	+	743	3	FSM	ENSG00000135482.7	ENST00000546903.1	743	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAATTGCCGTTTCATCC	-3	True	NA	NA	False	NA	NA	NA	56118406	56120828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56118768_56119087_56119152_56120510
transcript_41848.known	chr12	-	4271	30	FSM	ENSG00000139613.12	ENST00000394023.7	4271	30	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	112.12841924286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATGTCAGCGTATGTG	712	False	NA	-7	True	TTTAAA	-13	NA	56189567	56162982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164302_56164369_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_41851.known	chr12	-	5090	29	FSM	ENSG00000139613.12	ENST00000550164.6	5090	29	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	100.285434472544	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGGTGCATTCTGTG	1	True	NA	0	True	TATAAA	-21	NA	56189483	56162358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_41852.known	chr12	-	3839	29	FSM	ENSG00000139613.12	ENST00000347471.8	3839	29	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	110.879093923912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGATTTTAAAAAGCCA	731	False	NA	NA	False	ATTAAA	-13	NA	56189548	56163329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_41860.known	chr12	-	4076	28	FSM	ENSG00000139613.12	ENST00000267064.8	4076	28	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	55.6883844183155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	731	False	NA	NA	False	NA	NA	NA	56189548	56163344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_41886.known	chr12	+	1034	8	FSM	ENSG00000196465.10	ENST00000550443.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	256.309443080517	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	NA	False	NA	18	True	AATAAA	-14	NA	56152438	56157976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56152632_56153808_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
transcript_41888.known	chr12	-	741	3	FSM	ENSG00000139613.12	ENST00000547356.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_1	36	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAAGTCATGGCTGGGC	759	False	NA	NA	False	NA	NA	NA	56189520	56185789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56186241_56187186_56187307_56189350
transcript_4189.known	chr1	+	2175	8	FSM	ENSG00000040487.13	ENST00000375153.8	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	11.4071227301012	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	11	True	NA	25	True	AATAAA	-34	NA	19312325	19329300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_41890.known	chr12	+	655	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	12145	junction_1	967.927063367897	4697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	0	True	NA	25	True	AATAAA	-14	NA	56158361	56161574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
transcript_41891.known	chr12	+	703	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	263.666146356892	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	10	True	NA	18	True	AATAAA	-14	NA	56152606	56157976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
transcript_41892.known	chr12	+	708	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	6307.19043808114	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	-3	True	NA	30	True	AATAAA	-19	NA	56158358	56161579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_41893.known	chr12	+	528	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_2	5717.81542090159	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	-16	True	NA	26	True	AATAAA	-15	NA	56158345	56161575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
transcript_41894.known	chr12	+	683	7	FSM	ENSG00000092841.19	ENST00000547408.5	683	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	6489.19120966208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTCAGAGGGAAAGGA	6	True	NA	31	True	AATACA	-45	NA	56158367	56163008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56162263_56162332_56162854
transcript_41895.known	chr12	+	573	7	FSM	ENSG00000092841.19	ENST00000548400.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	6635.28016866407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	20	False	NA	26	True	AATAAA	-15	NA	56158381	56161575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_41896.known	chr12	+	502	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_3	5504.80141694503	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	-5	True	NA	25	True	AATAAA	-14	NA	56158356	56161574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
transcript_41897.known	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	80.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	2553	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56157546_56157697_56157736_56157881
transcript_41901.nic	chr12	-	3454	8	NIC	ENSG00000181852.18	novel	2452	8	NA	NA	-25	949	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	68.9237970219167	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGCATTACTCCCTT	-15	True	NA	0	True	AATAAA	-22	NA	56221958	56204500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212991_56213139_56213957_56214071_56216428_56216614_56221759
transcript_41907.nic	chr12	-	2505	8	NIC	ENSG00000181852.18	novel	2452	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	68.9237970219167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTGATGTTCCTA	-15	True	NA	-6	True	AAAAAG	-22	NA	56221958	56205449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212991_56213139_56213957_56214071_56216428_56216614_56221759
transcript_4191.known	chr1	+	1428	8	FSM	ENSG00000040487.13	ENST00000497827.1	1428	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	29.2323555712655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCGCACCTGTAATCCTA	379	False	NA	7	True	AATAAA	-16	NA	19312728	19328987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_41910.known	chr12	-	5216	7	FSM	ENSG00000181852.18	ENST00000615206.4	5216	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	58.6590904198905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTGTGGCTGCTTTC	7385	False	NA	-2	True	AATACA	-21	NA	56221701	56202503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221590
transcript_41911.known	chr12	-	5593	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	30.4192921241329	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTTGATACACTGTCT	21	True	NA	-3	True	AGTAAA	-25	NA	56221922	56202178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
transcript_41912.known	chr12	-	1193	7	FSM	ENSG00000181852.18	ENST00000552656.5	1193	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	41.0991348922199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTCGACTGGCTATCA	10	True	NA	NA	False	NA	NA	NA	56221933	56206446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221902
transcript_41922.nic	chr12	-	1259	3	ISM	ENSG00000181852.18	ENST00000548225.1	1001	5	-98	3159	-25	-2948	5prime_fragment	FALSE	canonical	3	90	junction_2	42	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAGTGGGGAACTGTAT	-15	True	NA	NA	False	AAAACA	-9	NA	56221958	56213195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_56214071_56216428_56216614_56221759
transcript_41924.known	chr12	-	2452	8	FSM	ENSG00000181852.18	ENST00000394013.6	2452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.9237970219167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTGATGTTCCTA	7177	False	NA	-6	True	AAAAAG	-22	NA	56221909	56205449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212995_56213139_56213957_56214071_56216428_56216614_56221759
transcript_41925.known	chr12	+	663	7	FSM	ENSG00000139579.13	ENST00000399713.6	663	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	104.983199714155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACTGAGTGCCCCAC	10	True	NA	NA	False	NA	NA	NA	56222014	56229032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56222200_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_41927.known	chr12	+	1411	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	91.3911009526274	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	28	True	NA	4	True	AATAAA	-4	NA	56224400	56229844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_4193.nic	chr1	+	3031	7	NIC	ENSG00000040487.13	novel	2175	8	NA	NA	-44	-3	intron_retention	FALSE	canonical	3	19	junction_6	32.2563516570337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACCTGCTTCTGTTGCT	NA	False	NA	22	True	AATAAA	-31	NA	19312281	19329297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327570
transcript_41931.known	chr12	+	1775	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	18.0709711969224	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-14	True	NA	14	True	AATAAA	-14	NA	56224358	56229854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_41935.known	chr12	+	1400	7	FSM	ENSG00000139579.13	ENST00000267023.9	1400	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	56.9280735275273	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-31	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56224442_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_41936.known	chr12	+	2031	11	FSM	ENSG00000139540.12	ENST00000266980.8	2031	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGACTACGACAGTTGT	589	False	NA	NA	False	AATAAA	-17	NA	56230651	56237846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56230874_56231203_56231562_56232688_56232873_56234823_56234987_56235156_56235327_56235559_56235701_56236395_56236493_56236581_56236747_56236930_56237012_56237149_56237341_56237587
transcript_41944.nic	chr12	-	2406	3	NIC	ENSG00000139645.11	novel	8681	28	NA	NA	-12	0	intron_retention	FALSE	canonical	3	30	junction_2	6	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTTAAGAACCACCAGAT	-33	True	NA	NA	False	NA	NA	NA	56258396	56255193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56257362_56257827_56257912_56258242
transcript_41945.known	chr12	+	1980	13	FSM	ENSG00000139540.12	ENST00000454355.7	1980	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGACTACGACAGTTGT	-12	True	NA	NA	False	AATAAA	-17	NA	56230050	56237846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56230123_56230239_56230296_56230830_56230874_56231203_56231562_56232688_56232873_56234823_56234987_56235156_56235327_56235559_56235701_56236395_56236493_56236581_56236747_56236930_56237012_56237149_56237341_56237587
transcript_41946.nic	chr12	+	1524	6	NIC	ENSG00000135469.14	novel	1570	5	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	49.7449494923857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGGCTTTATTATATT	-19	True	NA	NA	False	AATAAA	-13	NA	56266852	56270963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_56267253_56267793_56267941_56269058_56269252_56269459_56269562_56270149_56270319_56270450
transcript_41949.known	chr12	+	1570	5	FSM	ENSG00000135469.14	ENST00000308197.10	1570	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	24.6322958735072	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	0	True	NA	NA	False	AATAAA	-16	NA	56266941	56270966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56267253_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_41951.known	chr12	+	1410	5	FSM	ENSG00000135469.14	ENST00000433805.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	28.0846933399672	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	-8	True	NA	NA	False	AATAAA	-16	NA	56267282	56270966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_41952.known	chr12	+	1332	4	FSM	ENSG00000135469.14	ENST00000551911.5	1332	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	27.3901847788988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAATGTTGGGGGAAAG	19	True	NA	NA	False	NA	NA	NA	56266890	56270469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56267253_56267793_56267941_56269058_56269562_56270149
transcript_41958.known	chr12	-	4537	26	FSM	ENSG00000135473.16	ENST00000257931.9	4537	26	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_13	25.7102625424168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAGAACTGCTAGTGTG	-49	True	NA	-8	True	AATAAA	-28	NA	56334006	56316936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324036_56324183_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
transcript_41959.known	chr12	-	4576	26	FSM	ENSG00000135473.16	ENST00000440411.8	4523	26	-53	0	0	0	multi-exon	TRUE	canonical	3	67	junction_14	16.6757308685407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	8443	False	NA	-7	True	AATAAA	-29	NA	56334053	56316935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
transcript_41975.known	chr12	-	3057	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_11	337.031989555103	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	-15	True	NA	-2	True	AATAAA	-16	NA	56300391	56271700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
transcript_41981.known	chr12	-	2915	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_3	68.5922007228227	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	-3	True	NA	0	True	AATAAA	-18	NA	56300330	56271698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
transcript_41988.known	chr12	-	1450	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	1434	junction_2	119.838891850684	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTCAATCTGGACTA	-14	True	NA	-16	True	AATAAA	-16	NA	56315988	56309843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
transcript_4199.known	chr1	-	1686	10	FSM	ENSG00000077549.19	ENST00000375142.5	1686	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	712.994225384819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	-1	True	NA	6	True	AAGAAA	-36	NA	19485485	19338822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19342751_19342865_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_41998.known	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1718	junction_1	24.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-15	True	NA	-14	True	AATAAA	-29	NA	56316047	56314489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56314967_56315129_56315243_56315820
transcript_41999.known	chr12	-	666	3	FSM	ENSG00000257727.6	ENST00000553164.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAATAAGAATAAAAGG	8165	False	NA	-32	True	AATAAA	-11	NA	56316000	56314507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56314967_56315129_56315243_56315906
transcript_42.known	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00113_+_0_800
transcript_42001.known	chr12	-	670	2	FSM	ENSG00000257727.6	ENST00000546388.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	1767	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAATTTGTTAGCAAA	20	True	NA	NA	False	NA	NA	NA	56315897	56314649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56315243_56315820
transcript_42003.known	chr12	+	1037	4	FSM	ENSG00000110944.9	ENST00000228534.6	1037	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	1	True	NA	12	True	AATAAA	-19	NA	56338883	56340410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56339207_56339425_56339525_56339690_56339838_56339942
transcript_42009.known	chr12	-	3073	24	FSM	ENSG00000170581.14	ENST00000557235.5	3073	24	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_21	23.6538522422442	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATAACTTGCTTTCTTCT	-11	True	NA	NA	False	NA	NA	NA	56360126	56342935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355792_56356131_56356286_56356440_56356579_56360057
transcript_42016.known	chr12	-	4319	23	FSM	ENSG00000170581.14	ENST00000651915.1	4319	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	28.6644883533961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGGAAATGTCTCATC	-16	True	NA	-18	True	AATAAA	-9	NA	56360131	56341607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355804_56356131_56356286_56356440_56356579_56360057
transcript_4202.known	chr1	-	1462	9	FSM	ENSG00000077549.19	ENST00000433834.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	601.966361186404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCTCCGAGCCTGC	979	False	NA	-29	True	AATAAA	-15	NA	19484664	19339358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19484189
transcript_4203.known	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_8	206.212269276103	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-11	True	NA	-23	True	AATAAA	-21	NA	19485539	19338774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_42031.known	chr12	-	4376	29	FSM	ENSG00000111602.12	ENST00000229201.4	4376	29	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_23	144.004570505698	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACTTGGCGATATGT	6	True	NA	-6	True	ATTAAA	-27	NA	56449403	56417118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_42072.known	chr12	-	2387	18	FSM	ENSG00000135423.13	ENST00000311966.9	2387	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_14	9.19154116923511	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	5	True	NA	-8	True	AATAAA	-18	NA	56488161	56470951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
transcript_42078.known	chr12	-	2225	17	FSM	ENSG00000135423.13	ENST00000424141.6	2225	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	13.0862523283024	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	9	True	NA	-8	True	AATAAA	-18	NA	56488129	56470951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479779_56479902_56480287_56480388_56487936
transcript_42086.known	chr12	-	2296	15	FSM	ENSG00000135423.13	ENST00000610413.4	2296	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	17.5034981926354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCAGTCCTTCTTTCTT	NA	False	NA	0	True	AATAAA	-26	NA	56488414	56470943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56487936
transcript_42099.nnic	chr12	-	1787	12	NIC	ENSG00000135423.13	novel	2296	15	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	19.6300494898817	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTGCTAAACCCAGTC	-1	True	NA	-10	True	AATAAA	-16	NA	56488218	56470953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56487936
transcript_42106.known	chr12	-	859	3	FSM	ENSG00000135423.13	ENST00000471282.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCCCAGAAGTAAATAT	20	True	NA	NA	False	AATATA	-44	NA	56488362	56479568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56479902_56480287_56480388_56487936
transcript_42107.known	chr12	+	10769	2	FSM	ENSG00000176422.14	ENST00000338146.7	10769	2	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCTCTGAGAGTCTAT	3	True	NA	NA	False	AATAAA	-39	NA	56468577	56479708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56468677_56469038
transcript_42109.known	chr12	-	8938	29	FSM	ENSG00000076108.12	ENST00000549884.6	8938	29	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_28	40.7254370693526	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTTTTATTTAAAAA	-6	True	NA	NA	False	NA	NA	NA	56630326	56595595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601099_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519_56603701_56604216_56604292_56604584_56604800_56605072_56605328_56605829_56606064_56606246_56606313_56606632_56606734_56609735_56609947_56610113_56610216_56610408_56610518_56611572_56611634_56611772_56612247_56613014_56613234_56613952_56614139_56615013_56615608_56617394_56617533_56630124
transcript_4211.known	chr1	-	2063	8	FSM	ENSG00000077549.19	ENST00000482808.2	2063	8	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_7	201.103993810493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGTGAAAGAGAGAAGAAA	-9	True	NA	34	True	AAAACA	-26	NA	19485537	19339136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19344357_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_42111.known	chr12	+	8488	14	FSM	ENSG00000076067.13	ENST00000262031.10	8488	14	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_7	4.40010758340772	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTGATGGTGT	-1	True	NA	8	True	TATAAA	-33	NA	56521819	56596193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_42139.known	chr12	-	1759	10	FSM	ENSG00000110955.9	ENST00000262030.8	1759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3296	junction_7	471.832074124724	4709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	1	True	NA	-8	True	AATAAA	-18	NA	56645984	56638174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
transcript_4216.known	chr1	+	669	5	FSM	ENSG00000173436.15	ENST00000498642.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	2271.5250383828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGGTGGTCTTAA	31	True	NA	-33	True	NA	NA	NA	19597040	19626587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19625391_19625633_19626386
transcript_42164.known	chr12	-	705	5	FSM	ENSG00000110955.9	ENST00000547808.5	705	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1941.92396542707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAAGCTGTGGCAAAA	1	True	NA	NA	False	NA	NA	NA	56645984	56638375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56638424_56639105_56639308_56639979_56640151_56645217_56645354_56645836
transcript_42166.known	chr12	-	2077	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	1302.61179342696	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCATTTTGGCAGT	NA	False	NA	-9	True	AATAAA	-30	NA	56688408	56663342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
transcript_4217.known	chr1	+	438	5	FSM	ENSG00000173436.15	ENST00000485362.1	438	5	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_1	2256.8091827844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTAAACAAAAAGAG	60	False	NA	-14	True	NA	NA	NA	19597069	19626606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19597833_19597854_19622099_19622148_19623473_19623584_19626386
transcript_42176.known	chr12	-	1898	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	2925	junction_2	109.355066696724	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	3	True	NA	-15	True	AATAAA	-24	NA	56688284	56663348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_42178.nic	chr12	-	2167	8	NIC	ENSG00000110958.16	novel	2939	8	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	1050.41480630564	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	280	False	NA	-37	True	TTTAAA	-22	NA	56688069	56663612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687249
transcript_4218.known	chr1	+	583	5	FSM	ENSG00000173436.15	ENST00000467029.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	2224.7463900409	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCCATTGCATGGC	-9	True	NA	3	True	AATAAA	-12	NA	19597000	19626623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19617257_19617337_19622099_19622148_19623473_19623584_19626386
transcript_42184.known	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	1103.86291419421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	0	True	NA	-37	True	TTTAAA	-22	NA	56688287	56663612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_42186.known	chr12	-	1017	7	FSM	ENSG00000110958.16	ENST00000448157.6	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	1128.27248728113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTTCATAACATAGA	3	True	NA	4	True	AATAAA	-19	NA	56688284	56664166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_4220.known	chr1	+	3723	4	FSM	ENSG00000173436.15	ENST00000322753.7	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	4480	junction_2	66.016832870278	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGACTCCATGGCGCT	-31	True	NA	16	True	AATAAA	-22	NA	19596978	19629820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19626386
transcript_42207.known	chr12	-	1459	13	FSM	ENSG00000198056.15	ENST00000552590.6	1459	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	86.6357316584791	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTTGAGAAATAATTTA	-1	True	NA	16	True	AATAAA	-42	NA	56752373	56731595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_4221.known	chr1	+	3678	3	FSM	ENSG00000173436.15	ENST00000617872.4	3678	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGACTCCATGGCGCTT	-33	True	NA	17	True	AATAAA	-23	NA	19596976	19629821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19623473_19623584_19626386
transcript_42217.known	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_7	3175.14970240035	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	3	True	NA	-11	True	AATAAA	-20	NA	56725267	56712434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
transcript_42218.known	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	3428.40066836669	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	17	False	NA	-21	True	NA	NA	NA	56725516	56712503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
transcript_4222.known	chr1	+	657	5	FSM	ENSG00000173436.15	ENST00000481464.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2270.05534073511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	29	True	NA	9	True	AATAAA	-18	NA	19597038	19626629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19600786_19600972_19622099_19622148_19623473_19623584_19626386
transcript_42224.known	chr12	+	1751	6	FSM	ENSG00000025423.11	ENST00000554643.5	1751	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.70454411370329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCAGCAGTCTTT	NA	False	NA	21	True	AATAAA	-23	NA	56752448	56787790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56752582_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_42225.known	chr12	-	1206	6	FSM	ENSG00000198056.15	ENST00000550224.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	126.324344447141	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGCATATTTGTAAAC	25	True	NA	NA	False	AGTAAA	-1	NA	56752313	56743513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_42227.known	chr12	+	1722	6	FSM	ENSG00000025423.11	ENST00000555805.5	1722	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.02496105909555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	NA	False	NA	-33	True	AAGAAA	-27	NA	56752160	56787736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56752319_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_42228.known	chr12	-	6268	2	FSM	ENSG00000166860.3	ENST00000300101.3	6268	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTTCTCTTCCTACCT	-28	True	NA	-15	True	AATAAA	-16	NA	57006546	56998835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57004962_57006404
transcript_4223.known	chr1	+	1623	4	FSM	ENSG00000158747.15	ENST00000602662.1	1623	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.8357739838062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTCCAGAGGCCCTAGG	-31	True	NA	NA	False	NA	NA	NA	19596978	19658056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19655011_19655201_19655323_19655436_19656865
transcript_42230.known	chr12	-	930	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	47.151514356619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	36	False	NA	-2	True	AATAAA	-18	NA	57016538	57009999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_42231.known	chr12	-	804	7	FSM	ENSG00000166863.13	ENST00000458521.7	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	7.47031161033832	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-1	True	NA	-2	True	AATAAA	-18	NA	57016529	57009999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_42233.known	chr12	-	5617	9	FSM	ENSG00000166881.10	ENST00000300128.9	5617	9	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	34.0328425935889	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	1	True	NA	-3	True	AATAAA	-14	NA	57078791	57055642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57069233_57069307_57070673_57070894_57072787_57072913_57078618
transcript_42234.known	chr12	-	1381	8	FSM	ENSG00000166881.10	ENST00000554340.1	1381	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	92.297434019211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTCTAGCTCCTTCTTG	-7	True	NA	NA	False	NA	NA	NA	57078763	57059589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064645_57064740_57069233_57069307_57070819_57070894_57072787_57072913_57078618
transcript_42235.known	chr12	-	5370	8	FSM	ENSG00000166881.10	ENST00000379391.7	5370	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	59.8781074776252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-7	True	NA	-3	True	AATAAA	-14	NA	57078763	57055642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57070819_57070894_57072787_57072913_57078618
transcript_42237.known	chr12	+	14923	89	FSM	ENSG00000123384.14	ENST00000243077.8	14923	89	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	98.1931916813074	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGCCAAAAAAAAAAAAAAGA	-20	True	NA	NA	False	AATAAA	-27	NA	57128482	57213361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57154207_57154371_57154478_57154702_57156093_57156284_57156776_57156921_57158401_57158639_57159824_57160006_57160892_57161116_57162316_57162519_57162857_57162984_57165804_57165946_57166083_57166210_57166929_57167047_57167443_57167525_57169139_57169308_57173167_57173351_57173779_57173981_57175459_57175706_57175908_57176107_57177040_57177246_57177426_57177592_57178358_57178604_57178889_57179022_57179328_57179557_57179781_57179957_57180046_57180142_57180329_57180480_57180666_57180808_57181156_57181292_57183378_57183511_57183774_57183910_57184084_57184215_57184325_57184453_57184838_57184991_57185080_57185206_57185530_57185909_57187266_57187457_57190804_57191010_57191319_57191513_57192844_57192971_57193175_57193305_57193565_57193686_57193898_57194013_57194353_57194504_57194576_57194700_57194984_57195102_57195270_57195400_57195657_57195781_57195862_57196004_57196086_57196278_57196981_57197166_57197298_57197385_57197544_57197665_57198155_57198344_57198464_57198671_57199211_57199401_57199876_57200026_57200441_57200536_57200698_57200816_57201033_57201154_57201496_57201620_57201779_57201906_57202420_57202538_57203180_57203288_57203388_57203522_57204409_57204530_57204626_57204750_57205108_57205250_57205350_57205486_57205557_57205678_57206472_57206742_57208037_57208217_57208710_57208818_57209082_57209200_57209691_57209869_57210028_57210170_57210306_57210481_57210717_57210880_57211175_57211351_57211486_57211589_57211749_57211815_57211926_57212018_57212116_57212262_57212414
transcript_4224.known	chr1	+	2109	4	FSM	ENSG00000158747.15	ENST00000622566.4	2109	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.8357739838062	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTCCTCACTGACTGG	180	False	NA	28	True	AATAAA	-18	NA	19643408	19658456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19643626_19655011_19655201_19655323_19655436_19656865
transcript_42241.known	chr12	-	2728	23	FSM	ENSG00000166888.12	ENST00000640254.2	2728	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_22	29.2382631676003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGGACCTCACTAAGC	-7	True	NA	NA	False	NA	NA	NA	57111374	57096722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110042_57110111_57111128
transcript_42244.nic	chr12	-	4092	22	NIC	ENSG00000166888.12	novel	3963	22	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_21	21.183787066224	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1478	False	NA	NA	False	AATAAA	-26	NA	57110328	57095432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57109940
transcript_42245.nic	chr12	-	3990	22	ISM	ENSG00000166888.12	ENST00000640254.2	2728	23	1046	-1290	12	0	3prime_fragment	FALSE	canonical	3	7	junction_21	23.0999995091832	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1478	False	NA	NA	False	AATAAA	-26	NA	57110328	57095432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110042
transcript_42246.known	chr12	-	3119	22	FSM	ENSG00000166888.12	ENST00000543873.6	3119	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	23.8157134811616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGAGCAGGAGGGGGG	-10	True	NA	NA	False	NA	NA	NA	57110306	57096247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110076
transcript_4225.known	chr1	+	2024	4	FSM	ENSG00000158747.15	ENST00000375136.8	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	7.07106781186548	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCCTCCTCACTGA	-15	True	NA	24	True	AATAAA	-14	NA	19644310	19658452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19644447_19655011_19655201_19655323_19655436_19656865
transcript_42256.known	chr12	-	2879	20	FSM	ENSG00000166888.12	ENST00000538913.6	2879	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	25.4275354052787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTCTCCGCCCATTCT	21	True	NA	NA	False	GGGGCT	-43	NA	57111346	57096199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57111128
transcript_42258.nic	chr12	+	3482	15	ISM	ENSG00000123384.14	ENST00000243077.8	14923	89	-24	49932	-24	-2983	5prime_fragment	TRUE	canonical	3	24	junction_3	6.06638445931044	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAAGCGTGGTGGCAG	23	False	NA	NA	False	AATACA	-5	NA	57128458	57163429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57154207_57154371_57154478_57154702_57156093_57156284_57156776_57156921_57158401_57158639_57159824_57160006_57160892_57161116_57162316_57162519_57162857
transcript_4226.nnic	chr1	+	2960	4	NNC	ENSG00000158748.4	novel	3800	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.05480466765633	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTGTGGACTGG	6433	False	NA	NA	False	AATAAA	-16	NA	19664832	19680966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_19665034_19665915_19666468_19678566_19678726_19678918
transcript_4227.known	chr1	+	3800	3	FSM	ENSG00000158748.4	ENST00000289753.2	3800	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTGTGGACTGG	-8	True	NA	NA	False	AATAAA	-16	NA	19664874	19680966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19666468_19678566_19678726_19678918
transcript_42276.known	chr12	+	2491	7	FSM	ENSG00000166886.13	ENST00000300131.8	2491	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	4.34613493680177	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGACCCCTGCCTTGAG	2	True	NA	16	True	AATAAA	-21	NA	57089113	57095476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57093406_57093599_57094611
transcript_42277.known	chr12	+	1693	7	FSM	ENSG00000123384.14	ENST00000553277.5	1693	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	9.59890039998795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTCAGACGCCTGA	-10	True	NA	NA	False	AATAAA	-22	NA	57128492	57150059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57149679
transcript_42278.known	chr12	+	2318	6	FSM	ENSG00000166886.13	ENST00000342556.6	2318	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	13.311649033835	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATGACCCCTGCCTTGA	82	False	NA	15	True	AATAAA	-20	NA	57089093	57095475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57094611
transcript_42280.nic	chr12	+	2948	6	NIC	ENSG00000166886.13	novel	2491	7	NA	NA	-51	0	intron_retention	FALSE	canonical	3	37	junction_5	4.71593044902064	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGACCCCTGCCTTGAG	-20	True	NA	16	True	AATAAA	-21	NA	57088991	57095476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57089355_57091124_57091999_57092447_57092969_57093062_57093196_57093406_57093599_57094611
transcript_42287.known	chr12	-	4018	23	FSM	ENSG00000166888.12	ENST00000553533.2	4018	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	30.1826738651978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCCTAAGCCATAAAATAAA	373	False	NA	NA	False	NA	NA	NA	57111433	57095477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57100845_57100900_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111128
transcript_42288.known	chr12	+	1805	2	FSM	ENSG00000182379.10	ENST00000349394.6	1805	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTGTGAGACCTTTGT	-9	True	NA	NA	False	AATAAA	-16	NA	57216793	57226449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57217027_57224877
transcript_4229.nic	chr1	-	3016	15	NIC	ENSG00000162542.14	novel	2946	16	NA	NA	-122	0	intron_retention	TRUE	canonical	3	9	junction_14	4.0607629724434	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCACTTCTTGAGCA	-4	True	NA	-30	True	AATAAA	-14	NA	19800067	19682241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_19683445_19694433_19694552_19700767_19700886_19737371_19737457_19739823_19739961_19740776_19740942_19745531_19745652_19746455_19746600_19747162_19747261_19755633_19755767_19770541_19770570_19771307_19771483_19780579_19780767_19787025_19787118_19799854
transcript_42304.known	chr12	+	1904	12	FSM	ENSG00000182199.11	ENST00000557433.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_4	333.717453608551	2713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	37	False	NA	34	True	AATAAA	-13	NA	57229758	57234726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231918_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42311.known	chr12	+	1918	12	FSM	ENSG00000182199.11	ENST00000557487.5	1918	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	338.11186959886	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	-11	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232482_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42317.known	chr12	+	2006	12	FSM	ENSG00000182199.11	ENST00000414700.7	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	315.697731780321	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	75	False	NA	34	True	AATAAA	-13	NA	57230085	57234726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230245_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42323.known	chr12	+	1765	12	FSM	ENSG00000182199.11	ENST00000553474.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	326.457925098326	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACTTAGAAGGAGGGC	15	False	NA	NA	False	NA	NA	NA	57230327	57234551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230421_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42331.known	chr12	+	2152	12	FSM	ENSG00000182199.11	ENST00000553837.5	2152	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	448.794804849058	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	28	False	NA	34	True	AATAAA	-13	NA	57230383	57234726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232424_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42333.known	chr12	+	2121	12	FSM	ENSG00000182199.11	ENST00000449049.7	2121	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	336.377984951944	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATCTAATAAAATGCT	4	True	NA	7	True	NA	NA	NA	57230359	57234699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_4235.nic	chr1	+	789	5	ISM	ENSG00000169914.6	ENST00000375120.4	6515	8	-23	8638	-23	-2637	5prime_fragment	FALSE	canonical	3	19	junction_1	3.20156211871642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAAGACAAAGGGAATGG	3887	False	NA	NA	False	AATAAA	-9	NA	19882371	19904307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_19882735_19890384_19890534_19894367_19894481_19897539_19897663_19904266
transcript_42360.known	chr12	+	2215	11	FSM	ENSG00000182199.11	ENST00000556825.5	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	319.216055360629	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	3422	False	NA	29	True	AATGAA	-16	NA	57229572	57234935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57229812_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42367.known	chr12	+	1659	11	FSM	ENSG00000182199.11	ENST00000557348.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	431.907872120896	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAAGAGCCAGGTATAGT	2	True	NA	NA	False	AATAGA	-45	NA	57230102	57234476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230245_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42369.known	chr12	+	1885	11	FSM	ENSG00000182199.11	ENST00000555116.5	1885	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	516.907960859571	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACAGTGATTTGTCTCC	12	True	NA	71	True	NA	NA	NA	57230367	57234763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230421_57230802_57231001_57231712_57231914_57232210_57232293_57232424_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_4237.known	chr1	+	6515	8	FSM	ENSG00000169914.6	ENST00000375120.4	6515	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.94046184736874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTTGTTTTTATCA	-17	True	NA	NA	False	AATAAA	-19	NA	19882394	19912945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19882735_19890384_19890534_19894367_19894481_19897539_19897663_19904266_19904399_19904890_19904988_19906431_19906617_19907569
transcript_4238.known	chr1	-	813	5	FSM	ENSG00000188257.12	ENST00000649436.1	813	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTATGCATT	-4	True	NA	1	True	AATAAA	-20	NA	19979621	19975430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978485_19978733_19978880_19979579
transcript_4239.known	chr1	-	608	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.06155281280883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGAATTTCCCTCTC	-1	True	NA	NA	False	NA	NA	NA	19979618	19975672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
transcript_4240.known	chr1	-	510	2	FSM	ENSG00000187980.7	ENST00000442226.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCTCACCGTGTGTG	773	False	NA	NA	False	TTTAAA	-38	NA	20186486	20184241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20184625_20186359
transcript_4244.known	chr1	-	2428	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	13.9124245031395	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGCCTGTTGCTTTGT	-23	True	NA	-2	True	ATTAAA	-15	NA	20508151	20499447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
transcript_42441.known	chr12	+	2311	11	FSM	ENSG00000182199.11	ENST00000555774.5	2311	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	522.42500897258	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	4	True	NA	29	True	AATGAA	-16	NA	57230359	57234935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230667_57230802_57231001_57231712_57231914_57232210_57232293_57232424_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_42443.known	chr12	-	4372	24	FSM	ENSG00000179912.21	ENST00000402412.6	4411	24	38	1	0	0	multi-exon	TRUE	canonical	3	52	junction_13	18.1585123013453	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTCACTGTTTCTCT	-2	True	NA	-9	True	TATAAA	-20	NA	57431005	57253764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57292571_57292668_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57310263_57310464_57395748_57395819_57430719
transcript_42448.known	chr12	+	5779	29	FSM	ENSG00000155980.13	ENST00000455537.7	5779	29	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_28	6.83133162983138	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTGTAAATATTCTTT	-15	True	NA	17	True	AATAAA	-22	NA	57550043	57586633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57550401_57563438_57563527_57563619_57563694_57564107_57564213_57564459_57564509_57564917_57564974_57567125_57567214_57567493_57567619_57568962_57569068_57569255_57569405_57569534_57569684_57569986_57570163_57571320_57571390_57572060_57572268_57572579_57572727_57575083_57575273_57575639_57575758_57576086_57576152_57576268_57576379_57576760_57576863_57577712_57577774_57578008_57578081_57578237_57578343_57580955_57581173_57581414_57581569_57581869_57581953_57582601_57582630_57583100_57583216_57584217
transcript_4246.known	chr1	+	2448	1	FSM	ENSG00000183114.8	ENST00000332947.6	2448	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTTGTGTTTAATG	19	True	NA	21	True	AATAAA	-30	NA	20552572	20555020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20552600_20555000
transcript_42462.known	chr12	+	2797	21	FSM	ENSG00000166986.15	ENST00000262027.10	2797	21	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_9	80.0520299555233	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	-6	True	NA	18	True	AATAAA	-22	NA	57488067	57516652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
transcript_4247.known	chr1	+	809	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.18241233033047	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	7	True	NA	20	True	TATAAA	-20	NA	20589096	20618903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
transcript_4248.known	chr1	+	762	3	FSM	ENSG00000158825.6	ENST00000461985.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	-4	True	NA	20	True	TATAAA	-20	NA	20589085	20618903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20589284_20604927_20605040_20618451
transcript_4251.known	chr1	-	1941	11	FSM	ENSG00000244038.11	ENST00000602624.7	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	3345	junction_4	199.049767646184	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCACCTGGCCCCGGTCCT	7	True	NA	-6	True	AATAAA	-42	NA	20661369	20651776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
transcript_42516.known	chr12	+	2979	19	FSM	ENSG00000166986.15	ENST00000545888.6	2979	19	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	386.333065701502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGACCTTTCCTTTTGT	-8	True	NA	21	True	AATAAA	-25	NA	57488065	57516655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57516338_57516434
transcript_42520.known	chr12	+	2583	19	FSM	ENSG00000166986.15	ENST00000628866.2	2583	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	395.915227395904	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAGCTGAGACCTTTCC	-6	True	NA	15	True	AATAAA	-19	NA	57488067	57516649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
transcript_42554.known	chr12	-	2323	16	FSM	ENSG00000123329.20	ENST00000430041.6	2323	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	4.75628239512986	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGATGCAGTTCC	9902	False	NA	-10	True	CATAAA	-11	NA	57478198	57472269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57472689_57473602_57473709_57474041_57474177_57474422_57474477_57474625_57474704_57474874_57474974_57475290_57475399_57475482_57475616_57475832_57475932_57476070_57476167_57476363_57476455_57476589_57476652_57476870_57476964_57477155_57477270_57477458_57477681_57477784
transcript_42555.known	chr12	-	1439	16	FSM	ENSG00000175203.17	ENST00000549394.5	1439	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	248.955328433748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTTACTATAACTCTAG	110	False	NA	NA	False	NA	NA	NA	57547120	57530616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538252_57538348_57541363_57541373_57546027_57546097_57547027
transcript_42561.known	chr12	-	1705	15	FSM	ENSG00000175203.17	ENST00000543672.6	1705	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	219.715307447002	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	0	True	NA	-3	True	ATTAAA	-17	NA	57547177	57530309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57546027_57546097_57547027
transcript_42569.known	chr12	-	1973	14	FSM	ENSG00000175203.17	ENST00000548249.6	1973	14	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_8	35.6508379778191	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGTCTTGTCTTTACA	-15	True	NA	NA	False	ATTAAA	-5	NA	57547192	57530050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_42578.known	chr12	+	4202	13	FSM	ENSG00000166987.15	ENST00000355673.8	4202	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	13.7747252442855	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTCTGTACTCATT	-27	True	NA	12	True	NA	NA	NA	57522823	57530148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57523012_57524028_57524093_57524279_57524417_57524719_57524823_57524952_57525116_57525347_57526389_57526565_57527228_57527506_57527661_57527847_57528018_57528146_57528561_57528665_57528719_57528945_57529010_57529159
transcript_42580.known	chr12	-	1677	13	FSM	ENSG00000175203.17	ENST00000678322.1	1677	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	174.047806331734	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	6	True	NA	-3	True	ATTAAA	-17	NA	57547224	57530309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57547027
transcript_42582.known	chr12	-	1527	13	FSM	ENSG00000175203.17	ENST00000550201.5	1527	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	173.859857356435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTACAACTGTTTCTGA	25	True	NA	-47	True	NA	NA	NA	57547152	57530353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_42583.known	chr12	+	3972	12	FSM	ENSG00000111087.10	ENST00000228682.7	3972	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7.96687356371151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGCCACTTTATGTAT	-5	True	NA	1	True	AATAAA	-20	NA	57459784	57472268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57460202_57463664_57463792_57463998_57464092_57464672_57464869_57465110_57465256_57465606_57465697_57465787_57465926_57466239_57466390_57467332_57467498_57467993_57468225_57469430_57469699_57470316
transcript_42593.known	chr12	+	3394	10	FSM	ENSG00000111087.10	ENST00000543426.5	3394	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	11.0565326201412	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAATACCATGCCACT	-9	True	NA	-7	True	AATAAA	-12	NA	57460134	57472260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57460202_57464672_57464869_57465110_57465256_57465606_57465697_57465787_57465926_57466239_57466390_57467332_57467498_57467993_57468225_57469430_57469699_57470316
transcript_42607.known	chr12	-	903	4	FSM	ENSG00000175197.13	ENST00000346473.8	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	22.4845626053867	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTCTTTTACTTTTT	-2	True	NA	-7	True	ATTAAA	-15	NA	57520514	57516592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57517181_57517268_57517439_57517705_57517754_57520417
transcript_42608.known	chr12	-	1067	4	FSM	ENSG00000175197.13	ENST00000551116.5	1067	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2493523272593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTTACTTTTTCTTC	-5	True	NA	-3	True	ATTAAA	-19	NA	57520517	57516588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57517181_57517268_57517596_57517705_57517754_57520417
transcript_42609.known	chr12	-	951	3	FSM	ENSG00000175197.13	ENST00000552740.5	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGGAGCATCAGTCC	1	True	NA	NA	False	NA	NA	NA	57520511	57516808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57517181_57517268_57517754_57520417
transcript_42610.known	chr12	+	2460	2	FSM	ENSG00000139269.3	ENST00000266646.3	2460	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGTTACAGTCTT	12	True	NA	42	True	NA	NA	NA	57455306	57458025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57455835_57456093
transcript_42613.known	chr12	-	2042	2	FSM	ENSG00000287200.1	ENST00000656936.1	2042	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAATCCCAGCTGCTC	NA	False	NA	NA	False	AATACA	-14	NA	57462818	57457595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57459562_57462742
transcript_42618.known	chr12	-	211	2	FSM	ENSG00000175203.17	ENST00000549712.1	211	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGTGTGCTGCCAC	3	True	NA	NA	False	NA	NA	NA	57547174	57546027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57546092_57547027
transcript_42619.known	chr12	-	1902	14	FSM	ENSG00000175203.17	ENST00000678521.1	1902	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	167.212368954455	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGAGTTTCAAAATAT	8	True	NA	-2	True	AATAAA	-18	NA	57547222	57530152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532808_57532979_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_42622.known	chr12	+	2876	11	FSM	ENSG00000166908.18	ENST00000540759.6	2876	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	61.8922450715758	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	-27	True	NA	18	True	AATAAA	-15	NA	57591202	57603418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525_57601637_57601925
transcript_42623.known	chr12	+	3176	10	FSM	ENSG00000166908.18	ENST00000354947.10	3176	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	19.1472526475893	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	-38	True	NA	18	True	AATAAA	-15	NA	57591191	57603418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_42625.nic	chr12	+	3159	9	NIC	ENSG00000166908.18	novel	3176	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_5	62.7324427628958	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	-1	True	NA	18	True	AATAAA	-15	NA	57591169	57603418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_42631.nnic	chr12	+	2268	8	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	54.2112270923389	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	-6	True	NA	17	True	AATAAA	-23	NA	57604622	57609800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57604859_57605570_57605732_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_42635.nic	chr12	+	2621	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-166	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	42.3070784726255	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	1486	False	NA	17	True	AATAAA	-23	NA	57604455	57609800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_42637.known	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.460599195766	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	-2	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_42641.nic	chr12	+	2105	7	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	52.4044103317862	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	-4	True	NA	17	True	AATAAA	-23	NA	57604624	57609800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57604859_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_42644.nic	chr12	+	2368	6	ISM	ENSG00000178498.16	ENST00000337737.8	2028	7	-6	5	-6	-3	intron_retention	FALSE	canonical	3	26	junction_1	41.1271200061468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTATGCCACACCCGTT	-8	True	NA	14	True	AATAAA	-20	NA	57604817	57609797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519
transcript_42647.known	chr12	+	1840	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	51.6139516022558	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	8	True	NA	21	True	AATAAA	-27	NA	57604833	57609804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_42649.nic	chr12	+	2265	6	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	9	junction_1	47.873165761207	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	-4	True	NA	17	True	AATAAA	-23	NA	57604624	57609800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57604859_57605988_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_42658.known	chr12	+	569	3	FSM	ENSG00000178498.16	ENST00000550596.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCAAAGTAAGCAAAAAGG	-6	True	NA	NA	False	NA	NA	NA	57604622	57606511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57604859_57605988_57606253_57606442
transcript_42659.known	chr12	+	3199	5	FSM	ENSG00000178498.16	ENST00000548198.5	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	13.6083614002568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTTCTTTTC	-2	True	NA	20	True	AATAAA	-26	NA	57604823	57609803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_42660.known	chr12	+	2246	16	FSM	ENSG00000240771.8	ENST00000333972.11	2246	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.45143607047182	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGCTGCTGTCTTGGCA	11	True	NA	27	True	AATAAA	-16	NA	57610179	57617243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57610316_57610569_57610685_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
transcript_42665.known	chr12	+	2554	15	FSM	ENSG00000240771.8	ENST00000286494.9	2554	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.45160010235011	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTGTCTTGGCAGA	-2	True	NA	29	True	AATAAA	-18	NA	57611434	57617245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57611992_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
transcript_42669.known	chr12	-	1967	6	FSM	ENSG00000135454.14	ENST00000550764.5	1967	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.93907194296653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGTTTTTTCT	163	False	57633222	0	True	AATAAA	-20	NA	57633202	57629328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57630333_57630477_57630519_57630979_57631087_57631199_57631365_57631914_57632134_57632771
transcript_42670.known	chr12	-	5368	11	FSM	ENSG00000135454.14	ENST00000341156.9	5368	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.32379000772445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATAGTTTTGTGTTTTT	164	False	57633222	NA	False	NA	NA	NA	57633201	57623408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57626962_57627617_57627859_57628121_57628263_57628712_57628904_57629047_57629147_57630151_57630333_57630477_57630519_57630979_57631087_57631199_57631365_57631914_57632134_57632771
transcript_42674.known	chr12	+	2091	15	FSM	ENSG00000135506.16	ENST00000389146.10	2091	15	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_13	147.716150858631	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACCTCTCGGGCAAC	3	True	NA	NA	False	NA	NA	NA	57694144	57721024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_42677.known	chr12	+	2682	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	189.599362782017	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	-10	True	NA	25	True	AATAAA	-16	NA	57694131	57721557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_42684.known	chr12	+	2457	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_11	112.3457259097	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	5	True	NA	25	True	AATAAA	-16	NA	57694146	57721557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
transcript_42686.known	chr12	+	2505	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	192.29686123345	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	3	True	NA	23	True	AATAAA	-14	NA	57694144	57721555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_42714.known	chr12	-	5388	18	FSM	ENSG00000135439.12	ENST00000257897.7	5388	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	1.16167162694891	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGCCTCTTGTCTTA	-2	True	NA	NA	False	NA	NA	NA	57742157	57723760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57726795_57726973_57727230_57727359_57727583_57727680_57727772_57727936_57728086_57729638_57729768_57730494_57730615_57730790_57730954_57731365_57731471_57731555_57731643_57731808_57731968_57732402_57732513_57732844_57732980_57734025_57734174_57734318_57734405_57734591_57734680_57735368_57735428_57741911
transcript_42715.known	chr12	-	1865	8	FSM	ENSG00000135446.17	ENST00000257904.11	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	1407	junction_3	80.1139494592495	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	-10	True	NA	NA	False	AATATA	-15	NA	57752310	57747726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57751499_57751737_57752174
transcript_42720.known	chr12	-	776	7	FSM	ENSG00000135446.17	ENST00000546489.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	532.181673240758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCTCTGCCTTTCGAGC	-22	True	NA	NA	False	NA	NA	NA	57752322	57748590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57752174
transcript_42724.known	chr12	+	1100	6	FSM	ENSG00000135452.10	ENST00000549052.5	1100	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.0051610755105	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCAAGAACTCTTTCCT	2	True	NA	NA	False	NA	NA	NA	57745049	57747656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746592_57746721_57747017_57747132_57747215
transcript_42726.nic	chr12	+	1582	6	NIC	ENSG00000135452.10	novel	488	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	59.7039362186447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAAAAAAGAC	308	False	NA	NA	False	AAGAAA	-2	NA	57745355	57748218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57745440_57745744_57745913_57746175_57746257_57746588_57746721_57747017_57747132_57747215
transcript_42728.known	chr12	+	582	5	FSM	ENSG00000135452.10	ENST00000552816.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	70.5775282933598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAGCCCCACATGCC	-9	True	NA	NA	False	NA	NA	NA	57745038	57747025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57745232_57745744_57745913_57746175_57746257_57746588_57746721_57747017
transcript_42731.known	chr12	+	475	4	FSM	ENSG00000135452.10	ENST00000547472.5	475	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	61.937244225282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGATCCTTCTGACTTT	18	True	NA	NA	False	NA	NA	NA	57745065	57747292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57745218_57746588_57746721_57747017_57747132_57747215
transcript_42732.known	chr12	+	1500	2	FSM	ENSG00000255737.2	ENST00000542466.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCACATTTTGCGCTTG	-16	True	NA	33	True	TATAAA	-28	NA	57726270	57728356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57726379_57726964
transcript_42735.known	chr12	-	2372	9	FSM	ENSG00000111012.10	ENST00000228606.9	2372	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.8309518948453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTATTTCTCTCAT	-5	True	NA	1	True	AATAAA	-20	NA	57767078	57762333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57763256_57763610_57763809_57764097_57764177_57764377_57764551_57764753_57764927_57765010_57765212_57765296_57765500_57766006_57766198_57766846
transcript_42739.nic	chr12	+	1382	7	NIC	ENSG00000257921.6	novel	679	6	NA	NA	-460	-820	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	168.804373955969	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTGGATTTAGCTTT	6465	False	NA	20	True	AATAAA	-22	NA	57772199	57796734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57772398_57773016_57773129_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_4274.known	chr1	+	2657	8	FSM	ENSG00000158828.8	ENST00000321556.5	2657	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	32.3791316014699	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTTCTCTTC	-17	True	NA	14	True	AGTAAA	-17	NA	20633457	20651511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20633936_20637841_20638130_20639891_20639993_20644489_20644673_20645559_20645724_20648504_20648633_20648994_20649232_20650433
transcript_42742.known	chr12	+	2534	7	FSM	ENSG00000123297.20	ENST00000651066.1	2534	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	173.947709256419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAAGCATTGTTTTTT	17	True	NA	0	True	ATTAAA	-16	NA	57782789	57797571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782859_57783109_57783284_57783614_57784171_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_42743.known	chr12	+	1218	7	FSM	ENSG00000123297.20	ENST00000323833.12	1218	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	168.738127154344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTGGATTTAGCTTT	3	True	NA	20	True	AATAAA	-22	NA	57782775	57796734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57791964_57792028_57792985_57793074_57796176
transcript_42750.known	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	22.5690052948729	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	14	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_42751.known	chr12	+	651	6	FSM	ENSG00000123297.20	ENST00000543727.5	651	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	150.520961995331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTAAGCACCTTAAAA	26	True	NA	NA	False	NA	NA	NA	57782798	57802631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57802554
transcript_42752.known	chr12	+	689	6	FSM	ENSG00000123297.20	ENST00000457189.1	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	150.041860825571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCAGAGTCCCTCAC	45	False	NA	NA	False	NA	NA	NA	57782817	57796261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782908_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_42754.known	chr12	-	2474	8	FSM	ENSG00000111012.10	ENST00000547344.5	2474	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.74278606921194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTATTTCTCTCAT	5012	False	NA	1	True	AATAAA	-20	NA	57767095	57762333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57763256_57763610_57763809_57764097_57764177_57764377_57764551_57764753_57764927_57765010_57765500_57766006_57766198_57766846
transcript_42755.known	chr12	-	1378	6	FSM	ENSG00000037897.17	ENST00000324871.12	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_4	19.1164850325576	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCTGGAGAGTCC	2	True	NA	2	True	NA	NA	NA	57772105	57768470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771973
transcript_42759.known	chr12	+	1085	5	FSM	ENSG00000123297.20	ENST00000651899.1	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	176.570630343781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATACTGGATTTAGCTT	3	True	NA	19	True	AATAAA	-21	NA	57782775	57796733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782878_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_42763.known	chr12	-	1096	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	104.965172795552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCTGCCATTTCTC	-12	True	NA	-22	True	NA	NA	NA	57772119	57768581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
transcript_42770.known	chr12	+	2762	4	FSM	ENSG00000123427.17	ENST00000333012.5	2762	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTGTTGTTTTG	19	False	NA	12	True	AATAAA	-19	NA	57772677	57782541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57772902_57773016_57773129_57774628_57774768_57780254
transcript_42775.known	chr12	+	836	3	FSM	ENSG00000123427.17	ENST00000551420.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTTGTTACCCCAGATA	6465	False	NA	NA	False	AAAAAG	-37	NA	57772199	57780780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57772398_57773016_57773129_57780254
transcript_42776.known	chr12	+	2687	3	FSM	ENSG00000123427.17	ENST00000300209.13	2687	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTGTTGTTTTG	0	True	NA	12	True	AATAAA	-19	NA	57772613	57782541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57772902_57773016_57773129_57780254
transcript_42784.known	chr12	-	988	8	FSM	ENSG00000175215.11	ENST00000547701.5	988	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	119.388920280377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCTTAGATGCCGAGTG	1412	False	NA	NA	False	NA	NA	NA	57845534	57823460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57845439
transcript_42785.known	chr12	-	4785	8	FSM	ENSG00000175215.11	ENST00000398073.7	4785	8	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_5	31.7747171987608	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTGCCACCAACCTT	-17	True	NA	-10	True	AATAAA	-28	NA	57846729	57819926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
transcript_42786.known	chr12	-	900	8	FSM	ENSG00000175215.11	ENST00000551594.1	900	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	120.63031737249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGAGCAGAGGACGTCTA	402	False	NA	NA	False	NA	NA	NA	57846544	57823652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827124_57827551_57827591_57829447_57829597_57846371
transcript_42787.nic	chr12	-	1817	8	NIC	ENSG00000175215.11	novel	4785	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	113.318406379943	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTGGGCCTGGTTTGT	-6	True	NA	-3	True	TTTAAA	-19	NA	57846718	57822799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_57823728_57823903_57824006_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
transcript_42799.known	chr12	+	3134	6	FSM	ENSG00000166896.9	ENST00000300145.4	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	11.1642285895623	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGGTCTTCAAATT	31	True	NA	NA	False	AATAGA	-34	NA	57941566	57959148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57941889_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_42806.known	chr12	-	2214	3	FSM	ENSG00000257698.3	ENST00000659090.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATATATGTTGATACAA	5016	False	NA	NA	False	AAAACA	-42	NA	57936345	57930114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57931738_57935469_57935554_57935838
transcript_42807.known	chr12	-	4046	19	FSM	ENSG00000139263.12	ENST00000320743.8	4046	19	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_13	35.6705172722395	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAGCCCCATTTATACA	-10	True	NA	-22	True	AATAAA	-15	NA	58920504	58872154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_58872817_58874054_58874331_58874429_58874574_58876444_58876604_58877399_58877853_58878823_58879106_58880580_58880902_58882868_58883033_58883519_58883592_58885830_58885903_58886809_58886891_58887788_58887933_58888328_58888473_58888818_58888963_58889995_58890140_58890664_58890797_58913981_58914057_58914264_58914337_58919999
transcript_42816.nnic	chr12	-	1315	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	32	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-6	True	NA	-3	True	AGTAAA	-20	NA	59328609	59320075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59326402_59326562_59328356
transcript_42822.nnic	chr12	-	1714	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAATCCATGTGTGCTTT	NA	False	NA	-6	True	AATATA	-20	NA	59328653	59319561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59328356
transcript_42825.nnic	chr12	-	1200	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	NA	False	NA	-3	True	AGTAAA	-20	NA	59328653	59320075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59328356
transcript_42829.nnic	chr12	-	537	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCACAGTCTTTTTTAT	NA	False	NA	-17	True	AATAAA	-10	NA	59328636	59321926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59322184_59328356
transcript_42831.known	chr12	+	11936	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.49799919935936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAAATGAAATCTATA	-23	True	NA	NA	False	AATAAA	-16	NA	59596028	59789841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
transcript_42832.known	chr12	+	2250	6	FSM	ENSG00000118596.12	ENST00000552432.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTTATTTTTAAGGT	15	True	NA	NA	False	AATAAA	-22	NA	59596066	59780213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_59596237_59655151_59655251_59704791_59705019_59771218_59771363_59774656_59775476_59779422
transcript_42834.known	chr12	+	14971	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	32.9366188561911	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	10	True	NA	NA	False	ATTAAA	-15	NA	62260403	62416389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_42835.known	chr12	+	14950	21	FSM	ENSG00000135655.16	ENST00000353364.7	14950	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	30.6551790077957	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	222	False	NA	NA	False	ATTAAA	-15	NA	62260337	62416389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_42838.known	chr12	+	2226	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	63.4229628937518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	3	True	NA	NA	False	AATAAA	-15	NA	62260396	62336690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
transcript_42839.nic	chr12	+	540	5	ISM	ENSG00000135655.16	ENST00000549523.5	584	6	18	6573	10	-157	5prime_fragment	FALSE	canonical	0	0	junction_3	95.2627944162882	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCAAGATCCTGTCTT	18	False	NA	NA	False	NA	NA	NA	62260373	62314916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_62260504_62294178_62294307_62302789_62302921_62312285_62312310_62314789
transcript_42840.known	chr12	+	584	6	FSM	ENSG00000135655.16	ENST00000549523.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	92.8129301336834	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCAGTATTCCAGATGA	0	True	NA	23	True	AAGAAA	-2	NA	62260355	62321489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62312285_62312310_62314789_62314917_62321463
transcript_42841.known	chr12	+	13263	35	FSM	ENSG00000061987.16	ENST00000393630.8	13263	35	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_27	21.308838752887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTTTAGACCCTGTTT	5	True	NA	NA	False	ATTAAA	-18	NA	62466825	62600476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
transcript_42842.known	chr12	+	5612	34	FSM	ENSG00000061987.16	ENST00000393629.6	5612	34	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_27	22.3802598970131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTAAATTCTACTTAC	27	False	NA	NA	False	NA	NA	NA	62466847	62592865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
transcript_42851.known	chr12	+	6130	36	FSM	ENSG00000061987.16	ENST00000546600.5	6130	36	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_34	27.9614019677126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCATTTATTTAAATTT	1	True	NA	11	True	AATAAA	-21	NA	62466821	62593278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62588855_62588917_62592585
transcript_42852.known	chr12	-	1940	1	FSM	ENSG00000221949.6	ENST00000408887.3	1940	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTCTATTCTACAT	70	False	NA	NA	False	ATTAAA	-16	NA	62603690	62601750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_62601800_62603700
transcript_42854.known	chr12	-	6454	10	FSM	ENSG00000111110.12	ENST00000228705.7	6454	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_8	13.0042728020874	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGCAAAACTTTTTTC	-11	True	NA	-10	True	AATAAA	-26	NA	62935150	62643993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_62648637_62667177_62667330_62689698_62689807_62693935_62694000_62720170_62720290_62737501_62737587_62788225_62788339_62801815_62802161_62832113_62832280_62934491
transcript_4286.known	chr1	-	766	2	FSM	ENSG00000244038.11	ENST00000477229.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	3945	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATATGTCCAGCAGCC	7	True	NA	NA	False	NA	NA	NA	20661369	20660398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20660992_20661196
transcript_42864.nic	chr12	-	1708	3	ISM	ENSG00000111110.12	ENST00000228705.7	6454	10	-46	157330	-46	607	5prime_fragment	FALSE	canonical	3	163	junction_1	6	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAGAAGATGAAAGAGG	9	False	NA	NA	False	NA	NA	NA	62935196	62801323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_62802161_62832113_62832280_62934491
transcript_42865.nic	chr12	-	2085	2	ISM	ENSG00000111110.12	ENST00000228705.7	6454	10	0	186860	0	-28913	5prime_fragment	FALSE	canonical	3	175	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGTGTTTCATTGCGT	-11	True	NA	NA	False	AAAAAG	-14	NA	62935150	62830853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_62832280_62934491
transcript_42866.known	chr12	+	645	1	FSM	ENSG00000139239.7	ENST00000484568.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGGCAATCATAAAAAG	21	False	NA	NA	False	AAGAAA	-4	NA	62965324	62965969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62965300_62966000
transcript_42869.known	chr12	+	1599	7	FSM	ENSG00000118600.13	ENST00000543342.5	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	37.5810235801705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTAACATGTGATTTT	2	True	NA	0	True	AATAAA	-15	NA	63779865	63809100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63780130_63781018_63781175_63782540_63782705_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_42870.known	chr12	+	1854	6	FSM	ENSG00000118600.13	ENST00000261234.11	1854	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	3.16227766016838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAGGTTTAATTGGCT	0	True	NA	91	True	AATAAA	-26	NA	63779908	63809562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63780130_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_42871.known	chr12	+	1966	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	28.2729552753157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGAGAGGTTTAATT	9	False	NA	87	True	AATAAA	-22	NA	63780125	63809558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_42872.known	chr12	+	22920	22	FSM	ENSG00000196935.9	ENST00000355086.8	22920	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	5.60166803793801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAATTATACCTCAATAA	-11	True	NA	NA	False	AATAAA	-19	NA	63844699	64162217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63844884_63983946_63984143_63989909_63990073_64016949_64017013_64042789_64042973_64043446_64043576_64062916_64063139_64065117_64065220_64078918_64079117_64080285_64080371_64086998_64087027_64091275_64091379_64094931_64094993_64095126_64095205_64097240_64097376_64108931_64109038_64111761_64111987_64115813_64115894_64125976_64126158_64127589_64127725_64127860_64128201_64142294
transcript_42877.nic	chr12	+	1684	5	ISM	ENSG00000196935.9	ENST00000537556.1	2976	10	-998	38952	-895	-655	5prime_fragment	FALSE	canonical	3	9	junction_2	5.11737237261468	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAAAGAGATTGCAGA	43	False	NA	NA	False	AAGAAA	-22	NA	63843804	64042972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_63844884_63983946_63984143_63989909_63990073_64016949_64017013_64042789
transcript_4288.nnic	chr1	-	3670	11	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_10	14.4844744467999	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTGCTACAGACTTT	-20	True	NA	-7	True	AATAAA	-14	NA	20732192	20719730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20727957_20728087_20730745_20730852_20732003
transcript_42882.known	chr12	-	2698	4	FSM	ENSG00000174206.13	ENST00000311915.12	2698	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.9771087709958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGATGTAAGTGTTTTT	5	True	NA	NA	False	ATTAAA	-15	NA	64222265	64186315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64187653_64193846_64194659_64215677_64215964_64222002
transcript_42883.known	chr12	-	4159	3	FSM	ENSG00000174206.13	ENST00000398055.8	4159	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCAGACTGCTTTCT	-26	True	NA	-8	True	ATTAAA	-17	NA	64222296	64191079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64194659_64215677_64215964_64222002
transcript_42885.known	chr12	-	574	1	FSM	ENSG00000174206.13	ENST00000615991.1	574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCTTCATTGTTTTAA	-2	True	NA	NA	False	CATAAA	-17	NA	64222272	64221698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64221700_64222300
transcript_42887.known	chr12	-	1059	8	FSM	ENSG00000185306.13	ENST00000536975.5	1059	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3.39867921524866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64293383	64266982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64277679_64277804_64284663_64284754_64285953_64286061_64293280
transcript_42888.known	chr12	-	935	7	FSM	ENSG00000185306.13	ENST00000542397.5	935	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5939764421413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64293383	64266982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
transcript_42898.known	chr12	+	6370	25	FSM	ENSG00000184575.12	ENST00000332707.10	6370	25	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_10	89.5776257871723	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGAGTGGACTTTTG	-7	True	NA	20	True	AATAAA	-20	NA	64404391	64451125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64404805_64409961_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069_64420255_64420352_64420522_64421234_64421472_64423004_64423044_64423181_64423245_64424598_64424724_64425037_64425183_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413_64433604_64434506_64434624_64434793_64434910_64435626_64435675_64439243_64439316_64445074_64445132_64448104
transcript_4290.nnic	chr1	-	3548	10	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_9	8.4736337621945	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTGCTACAGACTTT	-4	True	NA	-7	True	AATAAA	-14	NA	20732176	20719730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20727957_20728087_20732003
transcript_4291.known	chr1	-	3898	10	FSM	ENSG00000189410.12	ENST00000444387.7	3898	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	13.3175832901979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTGCTACAGACTTT	-5	True	NA	-7	True	AATAAA	-14	NA	20732703	20719730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20727957_20728087_20732180
transcript_42915.known	chr12	+	3507	5	FSM	ENSG00000153179.13	ENST00000542104.6	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	6.86931583201704	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTATGTGTGTTTATT	13	True	NA	13	True	ATTAAA	-15	NA	64610494	64697564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64610744_64684786_64684895_64688215_64688454_64691469_64691580_64694762
transcript_42917.known	chr12	+	3022	21	FSM	ENSG00000183735.11	ENST00000331710.10	3022	21	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	19.3480619184455	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCATGTGTTTCTTTGT	-7	True	NA	15	True	AATAAA	-21	NA	64452119	64502114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_42921.known	chr12	+	1075	2	FSM	ENSG00000183735.11	ENST00000679065.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTGTTTAGATTCAAT	2	True	NA	NA	False	ATTAAA	-14	NA	64452128	64456855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839
transcript_42922.known	chr12	+	3001	21	FSM	ENSG00000183735.11	ENST00000677641.1	3001	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	51.1324505573515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	-37	True	NA	-33	True	NA	NA	NA	64452089	64502066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495773_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_42923.known	chr12	+	1261	4	FSM	ENSG00000183735.11	ENST00000678430.1	1261	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	18.006171781426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGCAAGAATATGGAG	-7	True	NA	NA	False	AAAACA	-2	NA	64452119	64465267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333
transcript_42924.known	chr12	-	5081	14	FSM	ENSG00000135677.11	ENST00000258145.8	5081	14	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	13.204804576567	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAATGTGTCCTTTGTT	16	True	NA	-6	True	ATTAAA	-17	NA	64759406	64713448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64716820_64720021_64720183_64721594_64721706_64723005_64723114_64728955_64729058_64737003_64737108_64739380_64739500_64740605_64740689_64743140_64743309_64744808_64744908_64745658_64745725_64747711_64747919_64752697_64752758_64759084
transcript_4293.nnic	chr1	-	3399	9	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	122	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	13.067134345372	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTGCTACAGACTTT	16	True	NA	-7	True	AATAAA	-14	NA	20732156	20719730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20732003
transcript_42931.nic	chr12	-	2124	6	ISM	ENSG00000135677.11	ENST00000258145.8	5081	14	-36	28526	-11	-2571	5prime_fragment	FALSE	canonical	3	152	junction_3	12.2702893201424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAAATAGGACGATTCT	-20	True	NA	NA	False	AATAAA	-19	NA	64759442	64741974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_64743309_64744808_64744908_64745658_64745725_64747711_64747919_64752697_64752758_64759084
transcript_42932.known	chr12	+	8312	13	FSM	ENSG00000111490.15	ENST00000542120.6	8312	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	6.92619825172672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTAGTAATTGTTTTC	19	True	NA	NA	False	AATAAA	-7	NA	64780515	64881032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64781287_64785880_64786046_64827834_64827897_64828443_64828510_64830376_64830503_64832118_64832305_64836489_64836659_64838682_64838852_64843379_64843486_64864667_64864781_64866763_64866904_64870601_64870809_64875000
transcript_42933.known	chr12	+	596	4	FSM	ENSG00000111490.15	ENST00000456757.6	596	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.0277537068951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTTCTCTCTC	421	False	NA	NA	False	NA	NA	NA	64781192	64818770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64781287_64785880_64786046_64787359_64787382_64818455
transcript_42936.known	chr12	-	1977	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	6.05530070819498	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTGGAGGTGATCT	6	True	NA	-3	True	AATAAA	-22	NA	65121305	65050625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
transcript_42939.nic	chr12	-	2897	9	NIC	ENSG00000156076.10	novel	1977	10	NA	NA	-293	-190	intron_retention	FALSE	canonical	3	22	junction_5	6.34428877022476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTGTGGTAGTGGCAT	1110	False	NA	NA	False	ATTAAA	-11	NA	65121598	65050815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_65051471_65055117_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
transcript_42941.known	chr12	+	4780	13	FSM	ENSG00000174106.3	ENST00000308330.3	4780	13	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_4	11.823939933692	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTGCCCTGTGTCTG	11	True	NA	55	True	ATTAAA	-44	NA	65169582	65248355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65171119_65210925_65210964_65215976_65216044_65218551_65218620_65238501_65238582_65238668_65238815_65239928_65240031_65240135_65240239_65240908_65241088_65243387_65243470_65245668_65245775_65245860_65245940_65246161
transcript_42942.nic	chr12	+	2169	8	ISM	ENSG00000174106.3	ENST00000308330.3	4780	13	-28	8116	-28	-5470	5prime_fragment	FALSE	canonical	3	151	junction_4	14.3612289849854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTCAAAGCATTATGAG	-17	True	NA	4	True	AATACA	-14	NA	65169554	65240239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_65171119_65210925_65210964_65215976_65216044_65218551_65218620_65238501_65238582_65238668_65238815_65239928_65240031_65240135
transcript_42947.nic	chr12	+	1597	2	ISM	ENSG00000174106.3	ENST00000308330.3	4780	13	-28	37397	-28	13	5prime_fragment	FALSE	canonical	3	163	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTAAGTAAACGATCA	-17	True	NA	NA	False	NA	NA	NA	65169554	65210958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_65171119_65210925
transcript_42948.known	chr12	+	4290	6	FSM	ENSG00000174099.12	ENST00000355192.8	4290	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.85472369909914	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	85	False	NA	NA	False	AATAAA	-18	NA	65278642	65466907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65278866_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
transcript_42950.known	chr12	+	1993	4	FSM	ENSG00000149948.14	ENST00000393578.7	1993	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	14.1656862405839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTTTGGAATTCT	11	True	NA	NA	False	AATAAA	-15	NA	65824459	65843523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65842590
transcript_42951.known	chr12	+	1529	4	FSM	ENSG00000149948.14	ENST00000354636.7	1529	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	15.06283137026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTCTCTGTCTCTTC	11	True	NA	16	True	CATAAA	-19	NA	65824459	65915527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65915058
transcript_42953.known	chr12	-	770	7	FSM	ENSG00000155957.19	ENST00000542724.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.584432297981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAGAAAAAAGGATT	-23	True	NA	-103	True	ATTAAA	-36	NA	66169999	66137919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_66138167_66138723_66138735_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_42954.known	chr12	-	2876	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	20.0637871688163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCACATCTTGCA	-20	True	NA	NA	False	NA	NA	NA	66169996	66135845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_42958.known	chr12	-	7728	3	FSM	ENSG00000139233.7	ENST00000266604.7	7728	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	60	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATCTGCATACCTT	-1	True	NA	-13	True	AATAAA	-17	NA	66130750	66116554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_66124019_66128895_66129114_66130704
transcript_42962.known	chr12	+	3472	13	FSM	ENSG00000127311.10	ENST00000247815.9	3472	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	3.17104959840674	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTTTTAAGGTATTTG	-20	True	NA	NA	False	GATAAA	-16	NA	66302492	66338199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_66302791_66304730_66305151_66306344_66306515_66309705_66310609_66313985_66314164_66315241_66315384_66318637_66318793_66321947_66322030_66322723_66322784_66323982_66324212_66324982_66325127_66331153_66331646_66338000
transcript_42967.known	chr12	+	11176	15	FSM	ENSG00000111530.13	ENST00000545606.6	11176	15	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_6	85.9971819661694	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCCATCTTGAAGCA	-19	True	NA	11	True	AATAAA	-16	NA	67269357	67319953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67269786_67281909_67282054_67292621_67292777_67295032_67295157_67297406_67297664_67297747_67297854_67298949_67299096_67302322_67302616_67304604_67304747_67305103_67306598_67307396_67307493_67309900_67310071_67310151_67310317_67311692_67311801_67312605
transcript_4297.nnic	chr1	-	3096	6	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	122	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	13.4372616257927	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTGCTACAGACTTT	16	True	NA	-7	True	AATAAA	-14	NA	20732156	20719730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20732003
transcript_42972.known	chr12	+	772	3	FSM	ENSG00000111530.13	ENST00000539434.1	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_1	29	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTGTGGAATAGTTCAG	41	False	NA	NA	False	NA	NA	NA	67269725	67293189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67269786_67281909_67282054_67292621
transcript_42973.known	chr12	+	663	2	FSM	ENSG00000111530.13	ENST00000541058.1	663	2	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAGGTGACTAATGTT	13	True	NA	NA	False	AGTAAA	-45	NA	67269389	67282176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67269786_67281909
transcript_42975.known	chr12	+	8888	3	FSM	ENSG00000127334.11	ENST00000344096.4	8888	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	1	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCGAATTTGTCATCT	-26	True	NA	3	True	AATAAA	-13	NA	67648744	67665406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67649183_67649796_67649946_67657105
transcript_42977.known	chr12	+	2209	2	FSM	ENSG00000127334.11	ENST00000393555.3	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTTCAGAAACTTTTT	7	True	NA	27	True	TATAAA	-28	NA	67648777	67658909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67649183_67657105
transcript_42981.known	chr12	-	2472	14	FSM	ENSG00000111554.15	ENST00000411698.6	2472	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	27.4446187911531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATTTGTTGTTCCT	18	True	NA	-47	True	NA	NA	NA	68332286	68294862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68326656_68327022_68331106_68331222_68332227
transcript_42982.known	chr12	-	2918	14	FSM	ENSG00000111554.15	ENST00000303145.11	2918	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	10.4411566159736	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTCTCCAGAAAG	-28	True	NA	-2	True	AATAAA	-14	NA	68332332	68294567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_42984.known	chr12	-	2718	3	FSM	ENSG00000111554.15	ENST00000393543.7	2718	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	35.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATACGTAATTTTGT	-20	True	NA	2	True	AATAAA	-22	NA	68332324	68325004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68327511_68331106_68331222_68332227
transcript_42985.nic	chr12	+	2259	9	NIC	ENSG00000127314.18	novel	1072	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	334.685299946084	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGCCACTTGAATGTG	-32	True	NA	31	True	AATAAA	-33	NA	68610850	68660522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_68611053_68624670_68624874_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_42986.known	chr12	+	1072	9	FSM	ENSG00000127314.18	ENST00000537460.5	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	333.600785932827	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGCACATTCTAATCAC	25	True	NA	NA	False	NA	NA	NA	68610907	68659401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611044_68624670_68624874_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_42988.known	chr12	+	13378	8	FSM	ENSG00000127314.18	ENST00000250559.14	13378	8	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_1	73.5271711543371	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATGACTGTATTATT	16	True	NA	NA	False	AATAAA	-23	NA	68610898	68671901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_42989.known	chr12	+	1060	7	FSM	ENSG00000127314.18	ENST00000542145.5	1060	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	285.818561328686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCGCTTTGATTAA	-4	True	NA	NA	False	AAGAAA	-23	NA	68610928	68659754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68656305_68656450_68657100_68657218_68659279
transcript_42990.known	chr12	+	874	5	FSM	ENSG00000127314.18	ENST00000543393.5	874	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	333.28553824011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATTTTAGCATAATAAAA	-1	True	NA	NA	False	NA	NA	NA	68610918	68659626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611044_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_42991.known	chr12	+	312	4	FSM	ENSG00000127314.18	ENST00000485252.6	312	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	381.216765400241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTATGCTTGAAATCT	0	True	NA	NA	False	AATGAA	-45	NA	68610932	68652014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611044_68648669_68648782_68650399_68650469_68651994
transcript_42996.known	chr12	+	6213	28	FSM	ENSG00000111581.10	ENST00000229179.9	6213	28	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_19	85.0500215922342	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAATAAGTTCTTTCCC	-14	True	NA	10	True	AATAAA	-14	NA	68686977	68745809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_43.known	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00116_+_0_2000
transcript_43003.nnic	chr12	+	3020	27	NIC	ENSG00000111581.10	novel	6213	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_8	189.501323159734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGGTTGTCTCTTTTT	-14	True	NA	25	True	AATAAA	-36	NA	68686977	68742688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_43004.known	chr12	+	2859	26	FSM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_20	195.292781228595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTCTCTTTTTCATG	2377	False	NA	29	True	AATAAA	-40	NA	68686950	68742692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_43006.nic	chr12	+	2526	25	ISM	ENSG00000111581.10	ENST00000229179.9	6213	28	-56	10982	-29	1302	5prime_fragment	TRUE	canonical	3	747	junction_19	75.3801361802667	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGTAAGTTAAATATG	2348	False	NA	NA	False	AAGAAA	-6	NA	68686921	68734827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707
transcript_43011.nic	chr12	+	1627	11	ISM	ENSG00000111581.10	ENST00000378905.6	2859	26	27	28314	0	0	5prime_fragment	FALSE	canonical	3	768	junction_9	75.1519128166409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTCTTAACAGCTTA	-14	True	NA	NA	False	AAAAAG	-19	NA	68686977	68714378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729
transcript_43016.known	chr12	-	1733	3	FSM	ENSG00000247363.3	ENST00000500695.2	1733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTATTTCTGTCATAAAA	-22	True	NA	NA	False	AATAAA	-16	NA	68686859	68674370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68675822_68685858_68686018_68686736
transcript_43017.known	chr12	+	3728	5	FSM	ENSG00000175782.11	ENST00000319429.7	3728	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	55.4639522572995	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTTGGGAAGATCCT	12	True	NA	NA	False	AATAAA	-18	NA	68746134	68762769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68760039
transcript_43018.known	chr12	+	17722	5	FSM	ENSG00000175782.11	ENST00000398004.4	17722	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	12.1449578014911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTCTTTCATTAAT	9	True	NA	NA	False	AATAAA	-17	NA	68746175	68781468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68764703
transcript_43025.known	chr12	+	3522	5	FSM	ENSG00000175782.11	ENST00000674096.1	3522	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	76.2540982505203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTTCTGCTTTTCAT	2	True	NA	NA	False	AATACA	-35	NA	68746124	68767158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156_68759240_68764703
transcript_43027.nic	chr12	+	1550	4	ISM	ENSG00000175782.11	ENST00000674096.1	3522	5	0	7436	0	-3047	5prime_fragment	FALSE	canonical	1	4	junction_2	71.6581390275305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACTGAGGAAGTGGGT	2	True	NA	NA	False	AAAAAG	-4	NA	68746124	68759722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156
transcript_43029.known	chr12	+	7490	11	FSM	ENSG00000135679.27	ENST00000258149.11	7490	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	2.85657137141714	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGAGGAGTGGTACT	-19	True	NA	NA	False	AATGAA	-19	NA	68808176	68845544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_43034.known	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	418.910778090037	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	14	False	NA	34	True	AATAAA	-14	NA	69239615	69269939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_43040.known	chr12	+	1915	10	FSM	ENSG00000111605.18	ENST00000456847.7	1915	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	362.923350068153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	-2	True	NA	34	True	AATAAA	-14	NA	69239599	69269939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257783_69258685_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_43047.known	chr12	+	6584	10	FSM	ENSG00000111605.18	ENST00000435070.7	6584	10	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_5	85.6527586346663	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTCTTTTTT	-5	True	NA	13	True	AATAAA	-18	NA	69239568	69274358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_43060.known	chr12	+	234	4	FSM	ENSG00000111605.18	ENST00000551516.1	234	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	544.092108215348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTTTGCTTCTTGTG	7	False	NA	-87	True	AAAACA	-29	NA	69239641	69269573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251142_69262468_69262563_69269511
transcript_43065.known	chr12	+	1468	7	FSM	ENSG00000127337.7	ENST00000247843.7	1468	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	22.5345413877353	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATTGTGACATCACATC	10	True	NA	89	True	AATACA	-16	NA	69359742	69390870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69360024_69362787_69362908_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
transcript_43066.known	chr12	+	1100	5	FSM	ENSG00000127337.7	ENST00000548020.5	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	132.944302247219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATAAAGTATTACTTGT	-23	True	NA	NA	False	NA	NA	NA	69359709	69390631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69360024_69362787_69362908_69370705_69370799_69370887_69370976_69390146
transcript_43067.known	chr12	+	428	2	FSM	ENSG00000127337.7	ENST00000552949.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTAATTTGTTTTGCTT	23	True	NA	NA	False	NA	NA	NA	69359755	69362947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69360024_69362787
transcript_43068.known	chr12	+	1916	16	FSM	ENSG00000166226.13	ENST00000299300.11	1916	16	0	0	0	0	multi-exon	TRUE	canonical	3	1949	junction_8	202.870796321205	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCTTATGTCTTATA	7	True	NA	29	True	AATAAA	-15	NA	69585458	69601570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
transcript_43072.nic	chr12	+	929	9	ISM	ENSG00000166226.13	ENST00000544368.6	1728	15	-44	8477	-10	-558	5prime_fragment	FALSE	canonical	3	1949	junction_8	146.140129670122	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGAGAAAGTTGAACGT	61	False	NA	NA	False	AATAGA	-21	NA	69585415	69593048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975
transcript_43075.nic	chr12	+	796	8	ISM	ENSG00000166226.13	ENST00000544368.6	1728	15	-44	9426	-10	-214	5prime_fragment	TRUE	canonical	3	2318	junction_4	39.2490738224275	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAATTGAAAATGCTAAAAT	61	False	NA	NA	False	AGTAAA	-11	NA	69585415	69592099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058
transcript_43079.known	chr12	+	9333	11	FSM	ENSG00000127328.22	ENST00000247833.12	9333	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	8.82949602185765	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTATCTACATCCT	-20	True	NA	NA	False	AATAAA	-19	NA	69738859	69823199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_43080.known	chr12	+	1755	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	37.0798271334551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	-18	True	NA	2	True	AATAAA	-15	NA	69738861	69815723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
transcript_43082.known	chr12	+	2840	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	38.4283017449379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGATAAATAAAAAGT	NA	False	NA	NA	False	AAAAAG	-15	NA	69778949	69817181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_43086.known	chr12	-	883	2	FSM	ENSG00000257815.8	ENST00000549651.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-4	True	NA	-15	True	AATAAA	-14	NA	70243360	70242305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_70242894_70243065
transcript_43087.known	chr12	-	452	2	FSM	ENSG00000257815.8	ENST00000553135.2	683	2	28	203	2	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-2	True	NA	NA	False	ATTAAA	-20	NA	70243358	70242488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_70242894_70243311
transcript_43092.known	chr12	+	3031	17	FSM	ENSG00000111596.14	ENST00000550641.6	3031	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	175.224487711478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	-7	True	NA	11	True	AATAAA	-19	NA	70243432	70354993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_70243481_70278131_70278275_70285399_70285587_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_4310.known	chr1	-	3884	13	FSM	ENSG00000127483.19	ENST00000312239.10	3884	13	0	0	0	0	multi-exon	FALSE	canonical	1	42	junction_12	159.730415248805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	0	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786648
transcript_43102.known	chr12	+	2844	16	FSM	ENSG00000111596.14	ENST00000229195.8	2844	16	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	66.9621451933022	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	-7	True	NA	11	True	AATAAA	-19	NA	70243432	70354993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_43108.nic	chr12	+	1380	13	NIC	ENSG00000111596.14	novel	2844	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	144.971740541236	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCCTTTTCTTGGGGT	-9	True	NA	NA	False	NA	NA	NA	70243430	70353938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_43113.known	chr12	+	2288	16	FSM	ENSG00000111596.14	ENST00000551043.5	2288	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	138.305876793271	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	70243750	70353913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_70244323_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_43114.known	chr12	+	747	7	FSM	ENSG00000111596.14	ENST00000550194.5	747	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	180.661515916737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTCAGATTTCCCAGCA	5427	False	NA	NA	False	NA	NA	NA	70278131	70335464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332790_70332847_70335437
transcript_43115.known	chr12	+	4717	3	FSM	ENSG00000135643.5	ENST00000258111.5	4717	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	18.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTGTGTGGCATT	-2	True	NA	15	True	AATAAA	-15	NA	70366289	70434292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_70367071_70400208_70400337_70430484
transcript_43117.known	chr12	-	565	3	FSM	ENSG00000258053.1	ENST00000549357.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTGTCTGGGCGACT	NA	False	NA	-3	True	AATAAA	-20	NA	71118247	71047401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_71047680_71115849_71115959_71118069
transcript_43121.known	chr12	+	4583	18	FSM	ENSG00000139292.13	ENST00000266674.10	4583	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	10.8977633335809	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAAGTCTATTTATT	-1	True	NA	NA	False	AATAAA	-33	NA	71439797	71586310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71440293_71504613_71504686_71524405_71524478_71535114_71535187_71553072_71553289_71556618_71556691_71559585_71559655_71561780_71561853_71566403_71566476_71566631_71566701_71566840_71566913_71571513_71571580_71572849_71572922_71577924_71577997_71578803_71578930_71580277_71580424_71582455_71582540_71583646
transcript_43124.nnic	chr12	+	902	5	NNC	ENSG00000139292.13	novel	2664	17	NA	NA	-38	-27884	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	29.852763691156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTATAATGCTCATCC	629	False	NA	7	True	AATAAA	-19	NA	71439759	71545143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_71440293_71504613_71504686_71524405_71524478_71535114_71535187_71544990
transcript_43132.nic	chr12	-	2610	11	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-80	25045	-41	-2520	5prime_fragment	FALSE	canonical	3	73	junction_3	15.205591076969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTGAATATAGATTGT	NA	False	NA	52	True	AAAAAG	-44	NA	71663899	71634742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_43136.nic	chr12	+	1573	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	46.8887572404682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	-5	True	NA	NA	False	AATAAA	-19	NA	71686081	71704056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
transcript_43137.nic	chr12	+	1720	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_6	38.9272826348479	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	-5	True	NA	NA	False	AATAAA	-19	NA	71686081	71704056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
transcript_43143.known	chr12	+	5662	6	FSM	ENSG00000139291.14	ENST00000266673.10	5662	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.1785508899857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCTACCTGAATTTCT	-5	True	NA	NA	False	AATACA	-14	NA	71686081	71705047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831
transcript_43146.nic	chr12	-	1531	4	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-80	35216	-41	0	5prime_fragment	FALSE	canonical	3	74	junction_1	5.71547606649408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAACACATTCGGCCAA	NA	False	NA	NA	False	AAAAAG	-12	NA	71663899	71644913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_71645076_71647748_71647814_71656884_71657302_71663012
transcript_43147.nic	chr12	-	1456	4	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-80	35291	-41	-75	5prime_fragment	FALSE	canonical	3	74	junction_1	5.71547606649408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGCAGGTGATGAAAGA	NA	False	NA	NA	False	AGTAAA	-16	NA	71663899	71644988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_71645076_71647748_71647814_71656884_71657302_71663012
transcript_43148.known	chr12	+	4432	3	FSM	ENSG00000173451.7	ENST00000308086.3	4432	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCATGCCTGTTATT	0	True	NA	8	True	ATTAAA	-19	NA	71664300	71680644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71664581_71674202_71674399_71676688
transcript_4315.known	chr1	-	6406	13	FSM	ENSG00000127483.19	ENST00000438032.6	6406	13	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_12	155.946750170976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGCCTAGAGTAT	0	True	NA	NA	False	ATTAAA	-22	NA	20787307	20740265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20787194
transcript_43151.nic	chr12	-	1326	3	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-80	38094	-41	-2878	5prime_fragment	FALSE	canonical	3	81	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAACAAGAAGAATTAGTA	NA	False	NA	-38	True	GATAAA	-9	NA	71663899	71647791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_71647814_71656884_71657302_71663012
transcript_43152.known	chr12	+	672	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATGTTTCTGTTTTT	101	False	NA	NA	False	ATTAAA	-21	NA	71664480	71665440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71664581_71664868
transcript_43153.known	chr12	-	1771	2	FSM	ENSG00000133858.17	ENST00000548100.1	1771	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGATTTGGCTTGTTTT	-16	True	NA	NA	False	AATACA	-24	NA	71663824	71656342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_71657302_71663012
transcript_43155.known	chr12	-	7037	35	FSM	ENSG00000133858.17	ENST00000378743.9	7037	35	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_27	14.9539084243093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTGTCTTTATTCAC	-7	True	NA	-3	True	AATATA	-18	NA	71663848	71609598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_71610566_71610694_71610758_71611057_71611098_71611785_71611888_71613334_71613436_71614534_71614701_71614833_71614939_71615205_71615317_71619314_71619410_71619925_71620125_71620209_71620316_71623359_71623598_71624103_71624293_71626259_71626447_71627750_71627935_71628917_71629038_71629608_71629711_71630599_71630722_71630822_71630955_71631777_71631888_71631971_71632515_71632885_71633018_71633263_71633439_71634154_71634305_71634703_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_43156.known	chr12	+	15558	7	FSM	ENSG00000080371.6	ENST00000261263.5	15558	7	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	38.4693239983352	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGAGTCTGGCTTCT	-14	True	NA	NA	False	AATAAA	-16	NA	71754862	71800286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71755289_71769799_71769860_71770591_71770700_71773958_71774023_71782030_71782086_71782569_71782659_71785530
transcript_43157.known	chr12	+	6184	18	FSM	ENSG00000121749.16	ENST00000550746.5	6184	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.1689909173007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTTCCATCAGTACCT	4525	False	NA	NA	False	ATTAAA	-14	NA	71839717	71927248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894324_71894376_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_43160.known	chr12	+	3157	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	14.2553443925427	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	-8	True	NA	10	True	AATAAA	-13	NA	71839758	71924313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_43164.known	chr12	-	3088	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTAAGTGTGTGTCTG	2670	False	NA	NA	False	AATAAA	-3	NA	72272236	72259576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_72262111_72264481_72264622_72271822
transcript_43165.known	chr12	-	2182	3	FSM	ENSG00000236333.4	ENST00000662127.1	2182	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAAGTTCATTTT	13	True	NA	-31	True	ACTAAA	-8	NA	72272554	72253535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_72254615_72255403_72255775_72271822
transcript_43168.known	chr12	-	10104	10	FSM	ENSG00000111615.14	ENST00000229214.9	10104	10	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	25.7629267565183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTCTTCCACTTTGT	8	True	NA	NA	False	AATAAA	-14	NA	75511609	75490862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_43172.nic	chr12	-	817	7	ISM	ENSG00000111615.14	ENST00000229214.9	10104	10	-24	13091	3	2210	5prime_fragment	FALSE	canonical	3	221	junction_4	10.5198225587063	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTAAGAAAGAATATACG	-16	True	NA	NA	False	AATAAA	-23	NA	75511633	75503953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_43173.known	chr12	-	5913	2	FSM	ENSG00000139289.14	ENST00000619060.1	5913	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGACCTTTTGAAGGC	782	False	NA	-15	True	AATAAA	-22	NA	76031776	76025446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76030093_76030509
transcript_43179.known	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	416.527848875545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	952	False	NA	51	True	NA	NA	NA	76084666	76047154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_43181.nic	chr12	-	1505	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	453	junction_1	494.397393017219	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTCTTACAAGATAA	874	False	NA	-18	True	AATAAA	-15	NA	76084744	76047595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_43182.known	chr12	-	13159	15	FSM	ENSG00000187109.15	ENST00000618691.5	13159	15	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_9	291.856487307844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTACATGTCTTTAA	-5	True	NA	NA	False	ATTAAA	-19	NA	76084685	76036584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_43187.known	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	629.88045603026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	889	False	NA	3	True	NA	NA	NA	76084729	76047631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
transcript_43188.known	chr12	-	1838	13	FSM	ENSG00000187109.15	ENST00000549596.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_7	312.071840019783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTTGAATATCAAG	-5	True	NA	NA	False	ATTAAA	-24	NA	76084685	76049145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_43192.nic	chr12	-	1158	7	ISM	ENSG00000187109.15	ENST00000549596.5	1838	13	-553	6979	-503	0	5prime_fragment	FALSE	canonical	3	1581	junction_1	144.450299026651	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGATGAAGAAAAAGAA	380	False	NA	-4	True	AAGAAA	-22	NA	76085238	76056124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_43197.known	chr12	-	3568	2	FSM	ENSG00000179941.9	ENST00000650064.2	3568	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTCATTTTTTTT	10	True	NA	-1	True	AATGAA	-17	NA	76348415	76344473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76347788_76348161
transcript_4320.nic	chr1	-	4165	12	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	-3	0	intron_retention	FALSE	canonical	1	46	junction_11	149.606149606224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	-17	True	NA	-24	True	AATAAA	-16	NA	20786669	20742681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20786185
transcript_43201.nic	chr12	-	840	7	NIC	ENSG00000091039.17	novel	732	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	88.7332143750768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	23	False	NA	NA	False	AAAAAG	-2	NA	76559783	76402698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_76402767_76410563_76410635_76450850_76450989_76459858_76459896_76487509_76487619_76537956_76537987_76559396
transcript_43204.known	chr12	-	732	6	FSM	ENSG00000091039.17	ENST00000549570.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.3286042668532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	-12	True	NA	NA	False	AAAAAG	-2	NA	76559712	76402698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76402767_76410563_76410635_76450850_76450989_76487509_76487619_76537956_76537987_76559396
transcript_43206.nic	chr12	-	843	5	ISM	ENSG00000091039.17	ENST00000553139.5	902	6	-45	2818	-44	0	5prime_fragment	FALSE	canonical	3	86	junction_3	60.4938013353434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	NA	False	NA	NA	False	AAAAAG	-2	NA	76559853	76402698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_76402767_76410563_76410635_76450850_76450989_76487509_76487619_76559396
transcript_43207.known	chr12	-	588	4	FSM	ENSG00000091039.17	ENST00000549646.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.239089059084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAATGGCTCAGAGA	13	False	NA	NA	False	NA	NA	NA	76559793	76402755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76402767_76410563_76410635_76487509_76487619_76559396
transcript_4321.nic	chr1	-	3826	12	NIC	ENSG00000127483.19	novel	6406	13	NA	NA	-16	0	intron_retention	FALSE	canonical	1	172	junction_8	124.409946188976	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	NA	False	NA	-24	True	AATAAA	-16	NA	20787339	20742681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
transcript_43211.known	chr12	+	4732	17	FSM	ENSG00000186908.15	ENST00000426126.7	4732	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	11.8578823994843	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCTTATGATTTCAC	0	True	NA	29	True	AATAAA	-14	NA	76764114	76853696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_76764330_76797433_76797538_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76842982_76845708_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
transcript_43222.known	chr12	-	910	7	FSM	ENSG00000175183.10	ENST00000552330.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	847.874335552674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATAGGCTGGCTAACTC	573	False	NA	NA	False	NA	NA	NA	76878991	76858828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76862809_76862960_76863175_76863345_76866148_76866262_76878937
transcript_43228.known	chr12	-	908	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	1701	junction_5	64.7907400791193	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTCTTTTAATTA	-3	True	NA	-19	True	AATAAA	-19	NA	76879019	76858708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_43229.known	chr12	-	754	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	676.224400624526	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCCCTGTACTTGGATA	-7	True	NA	NA	False	ACTAAA	-35	NA	76879023	76858841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
transcript_43234.known	chr12	-	632	5	FSM	ENSG00000175183.10	ENST00000547435.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	1701	junction_4	72.2858907394797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGTA	579	False	NA	NA	False	AATGAA	-16	NA	76878985	76859468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_43235.known	chr12	-	2302	11	FSM	ENSG00000165891.16	ENST00000550669.5	2302	11	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	10.9913602433912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATGAAAGCACCAAAGA	-12	True	NA	NA	False	AATACA	-22	NA	77065567	77027943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
transcript_43236.known	chr12	-	5297	12	FSM	ENSG00000165891.16	ENST00000416496.6	5297	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	25.0905797079829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTGGTTGTATTTTT	-8	True	NA	-2	True	AATAAA	-19	NA	77065563	77021247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_77024186_77027882_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
transcript_43239.known	chr12	+	4705	11	FSM	ENSG00000067715.14	ENST00000261205.9	4705	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	7.07106781186548	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	-24	True	NA	9	True	AATAAA	-21	NA	78864773	79452008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_43242.nic	chr12	+	996	6	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	724	158236	-57	-4081	internal_fragment	FALSE	canonical	3	93	junction_4	7.62627038597505	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGGAGAAGAAAAAGAAGA	7	True	NA	2	True	NA	NA	NA	78864716	79292043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007
transcript_43244.nic	chr12	+	872	5	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	745	164375	-36	0	internal_fragment	FALSE	canonical	3	93	junction_4	8.46684711093805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGAAGAATGCCA	-1	True	NA	19	True	AAAAAG	-24	NA	78864737	79285904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786
transcript_43248.nic	chr12	+	655	2	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	595	472348	-186	-239586	internal_fragment	FALSE	canonical	3	113	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATTTGGAAAAAACAAATT	606	False	NA	10	True	NA	NA	NA	78864587	78977931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_78865110_78977798
transcript_4325.nic	chr1	-	1864	12	NIC	ENSG00000127483.19	novel	6406	13	NA	NA	-16	948	combination_of_known_junctions	FALSE	canonical	1	172	junction_8	124.409946188976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTAGCTTTAGGTGCTT	NA	False	NA	-31	True	AATAAA	-13	NA	20787339	20744643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
transcript_43254.known	chr12	+	567	3	FSM	ENSG00000257474.5	ENST00000552167.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	5290	False	NA	41	True	AATAGA	-34	NA	79545529	79550535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_79545559_79546065_79546177_79550108
transcript_43256.known	chr12	-	8991	7	FSM	ENSG00000177425.11	ENST00000328827.9	8991	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	254.249658581656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTTTTGTATGTG	6	True	NA	-7	True	AATAAA	-19	NA	79690964	79584878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728_79690392_79690871
transcript_43263.nic	chr12	-	4186	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	371	4914	-12	-1	3prime_fragment	FALSE	canonical	3	781	junction_2	69.881614177121	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTATTTATGAGCTC	-17	True	NA	-31	True	AATAAA	-14	NA	79690593	79589792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43264.nic	chr12	-	3782	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	371	5318	-12	-405	3prime_fragment	FALSE	canonical	3	781	junction_2	69.881614177121	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAATACTTTTAAAGAC	-17	True	NA	24	True	NA	NA	NA	79690593	79590196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43266.nic	chr12	-	2024	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	371	7076	-12	560	3prime_fragment	FALSE	canonical	3	781	junction_2	69.881614177121	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCACTTTAACTCCTG	-17	True	NA	0	True	AATAAA	-33	NA	79690593	79591954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43267.nic	chr12	-	1833	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	371	7267	-12	369	3prime_fragment	FALSE	canonical	3	781	junction_2	69.881614177121	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTTTCCACTTATTC	-17	True	NA	-1	True	CATAAA	-19	NA	79690593	79592145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43268.nic	chr12	-	1608	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	371	7492	-12	144	3prime_fragment	FALSE	canonical	3	781	junction_2	69.881614177121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTTTGGTTTTGTGTG	-17	True	NA	-9	True	ATTAAA	-11	NA	79690593	79592370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43269.nic	chr12	-	1464	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	371	7636	-12	0	3prime_fragment	FALSE	canonical	3	781	junction_2	69.881614177121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAACTAAGCAAGTA	-17	True	NA	-51	True	AATACA	-1	NA	79690593	79592514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43271.nic	chr12	-	1175	5	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	427	9504	44	-1868	internal_fragment	FALSE	canonical	3	781	junction_1	70.7226095389586	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGAGGAAATGATTGG	0	True	NA	NA	False	AAGAAA	-27	NA	79690537	79594382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43273.nic	chr12	-	1154	5	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	-100	11649	-100	-4013	5prime_fragment	FALSE	canonical	3	207	junction_4	309.5758186616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGATCTTGAAAAGGTA	425	False	NA	-18	True	AAGAAA	-2	NA	79691064	79596527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79596659_79613574_79613610_79621075_79621208_79689728_79690392_79690871
transcript_43276.nic	chr12	-	1163	4	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	371	11649	-12	-4013	internal_fragment	FALSE	canonical	3	883	junction_1	45.9637538356765	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGATCTTGAAAAGGTA	-17	True	NA	-18	True	AAGAAA	-2	NA	79690593	79596527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79596659_79613574_79613610_79621075_79621208_79689728
transcript_43277.known	chr12	-	1573	4	FSM	ENSG00000177425.11	ENST00000551712.1	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	416.956432576195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATAATGATGCCGTTTA	1409	False	NA	NA	False	NA	NA	NA	79690080	79603667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79604722_79613574_79613610_79621075_79621208_79689728
transcript_43281.known	chr12	-	427	2	FSM	ENSG00000177425.11	ENST00000547016.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTTGTCATTTTCA	-8	True	NA	-31	True	TTTAAA	-20	NA	79690061	79688371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79688466_79689728
transcript_43282.known	chr12	-	5620	25	FSM	ENSG00000058272.19	ENST00000450142.7	5620	25	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_13	73.8498852778767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAACTAGTTTTTTTA	-6	True	NA	-4	True	CATAAA	-18	NA	79935097	79773567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_43283.known	chr12	-	2925	24	FSM	ENSG00000058272.19	ENST00000550107.5	2925	24	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_12	72.7797256714332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAGCAAGT	14	True	NA	NA	False	NA	NA	NA	79934931	79775928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_43286.nic	chr12	-	2496	16	NIC	ENSG00000058272.19	novel	5620	25	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_4	123.509135964376	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	209	False	NA	NA	False	GATAAA	-8	NA	79935245	79797268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806298_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_43287.nic	chr12	-	2532	16	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	215	22863	-115	0	internal_fragment	FALSE	canonical	3	252	junction_4	85.6503486404009	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	209	False	NA	NA	False	GATAAA	-8	NA	79935245	79797268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_43291.nic	chr12	-	2364	15	ISM	ENSG00000058272.19	ENST00000550107.5	2925	24	-314	21340	-115	0	5prime_fragment	FALSE	canonical	3	214	junction_3	85.5894328781782	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	209	False	NA	NA	False	GATAAA	-8	NA	79935245	79797268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_43297.nic	chr12	-	1861	11	ISM	ENSG00000058272.19	ENST00000547330.5	2275	15	-115	11252	-115	-1670	5prime_fragment	FALSE	canonical	3	374	junction_4	53.4865403629736	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGTTTATTTTGATT	209	False	NA	NA	False	AAGAAA	-2	NA	79935245	79808485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_43301.nic	chr12	-	3036	5	ISM	ENSG00000058272.19	ENST00000550510.5	631	6	-478	5226	-63	1790	5prime_fragment	FALSE	canonical	3	475	junction_1	46.0889086440545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAAACAATTGTGCCTCA	-7	True	NA	NA	False	NA	NA	NA	79935193	79826337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_43302.known	chr12	-	443	3	FSM	ENSG00000058272.19	ENST00000550007.1	443	3	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	NA	False	NA	NA	False	GATAAA	-8	NA	79805816	79797268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79797396_79798493_79798585_79805591
transcript_43303.known	chr12	-	6121	6	FSM	ENSG00000111052.8	ENST00000552864.6	6121	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	12.3385574521497	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTATTGTTTTCATT	2	True	NA	0	True	AGTAAA	-17	NA	80937934	80792519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848250_80848323_80889250_80889370_80937640
transcript_43311.known	chr12	+	8391	16	FSM	ENSG00000111058.8	ENST00000548058.6	8391	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	10.0044434572288	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTATTTATTTATTGAT	-5	True	NA	NA	False	AATAAA	-21	NA	81078078	81261210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
transcript_43318.known	chr12	-	1585	4	FSM	ENSG00000133773.12	ENST00000256151.8	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	36.1509182302316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTCTGAAATTGCATTA	10	True	NA	NA	False	AATAAA	-21	NA	82358387	82352302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358222
transcript_43319.known	chr12	-	984	4	FSM	ENSG00000133773.12	ENST00000548126.1	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	103.345160613462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAATCAGAGCTATCA	7	True	NA	NA	False	AATAAA	-11	NA	82358786	82352846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358678
transcript_43324.nic	chr12	-	587	3	ISM	ENSG00000133773.12	ENST00000256151.8	1585	4	-12	2192	-3	-1648	5prime_fragment	FALSE	canonical	3	367	junction_2	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCTACTTTGAAAAT	-2	True	NA	NA	False	AAGAAA	-4	NA	82358399	82354494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_82354595_82356959_82357270_82358222
transcript_43325.nic	chr12	-	526	3	ISM	ENSG00000133773.12	ENST00000256151.8	1585	4	-16	2257	6	-1713	5prime_fragment	FALSE	canonical	3	367	junction_2	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATCAAATCAAAAAGCACAA	-6	True	NA	NA	False	AATAAA	-8	NA	82358403	82354559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_82354595_82356959_82357270_82358222
transcript_43327.known	chr12	-	600	2	FSM	ENSG00000133773.12	ENST00000552606.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAGTCACGGTTTAAT	-12	True	NA	74	True	NA	NA	NA	82358409	82356856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82357270_82358222
transcript_43328.known	chr12	-	553	2	FSM	ENSG00000133773.12	ENST00000547758.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATTAGGGAAACATTT	NA	False	NA	87	True	NA	NA	NA	82358805	82356843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82357270_82358678
transcript_43329.known	chr12	+	2064	12	FSM	ENSG00000127720.8	ENST00000248306.8	2064	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.28260092478945	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGACCTACATTCCTGA	2	True	NA	85	True	AATAAA	-28	NA	82358528	82479239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_43333.known	chr12	+	743	4	FSM	ENSG00000127720.8	ENST00000548200.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	4.32049379893857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGCAAAAGAAAG	13	True	NA	NA	False	NA	NA	NA	82358539	82398980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794
transcript_43334.known	chr12	+	5669	12	FSM	ENSG00000179104.9	ENST00000321196.8	5669	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.6958871005616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTAAGCCGTTTT	3	True	NA	NA	False	AATAAA	-15	NA	82686905	83134866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82687670_82857009_82857581_82895817_82896647_82930430_82930546_82965023_82965110_82965559_82965745_82966918_82966998_82985924_82986047_83030797_83030880_83050903_83051019_83061767_83061832_83132209
transcript_43336.known	chr12	+	2682	6	FSM	ENSG00000179104.9	ENST00000548305.5	2682	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAGTTTCTCAGAGCA	47	False	NA	15	True	AATAAA	-19	NA	82687000	82965971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82687670_82857009_82857581_82895817_82896647_82930430_82930546_82965023_82965110_82965559
transcript_43338.nic	chr12	+	1421	2	ISM	ENSG00000179104.9	ENST00000548305.5	2682	6	-190	108400	-69	-108400	5prime_fragment	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACAAAGTAAGTGATTG	246	False	NA	14	True	AATAAA	-17	NA	82686810	82857571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_82687670_82857009
transcript_4334.known	chr1	-	970	8	FSM	ENSG00000127483.19	ENST00000424732.5	970	8	0	0	0	0	multi-exon	FALSE	canonical	1	172	junction_4	140.174235601735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGGCAAAGGTGCTTC	-5	True	NA	NA	False	NA	NA	NA	20787312	20757198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
transcript_43340.known	chr12	-	4799	12	FSM	ENSG00000072041.18	ENST00000266682.10	4799	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	62.8820225527979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGCTGTTTTGATATA	-2	True	NA	-1	True	AATAAA	-19	NA	84912799	84859490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84862007_84863438_84863602_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_43343.known	chr12	-	4312	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	17.8518206354422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTTTTCGATTTT	9903	False	NA	0	True	AATAAA	-22	NA	84912876	84880844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_43346.known	chr12	-	1831	2	FSM	ENSG00000072041.18	ENST00000681628.1	1831	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTAATCTACAAACCCT	-10	True	NA	-44	True	NA	NA	NA	84912839	84890794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84892309_84912522
transcript_43347.known	chr12	+	1890	6	FSM	ENSG00000133640.20	ENST00000529408.1	1890	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	2.56124969497314	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAACACATTAAATT	-18	True	NA	NA	False	AAAAAG	-14	NA	85036339	85048587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_85036408_85038149_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246
transcript_43348.known	chr12	+	1332	4	FSM	ENSG00000180318.4	ENST00000316824.4	1332	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGTTATAGATTGAT	1	True	NA	NA	False	AATAAA	-14	NA	85280219	85301784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_85280488_85283571_85283877_85286852_85286982_85301154
transcript_43349.known	chr12	+	1239	4	FSM	ENSG00000133636.11	ENST00000256010.7	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_3	24.9131825880731	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTCTACAGATTTA	0	True	NA	22	True	AATAAA	-24	NA	85874294	85882992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_85874477_85876639_85876702_85878344_85878570_85882222
transcript_43350.known	chr12	-	25116	4	ISM	ENSG00000182050.14	ENST00000611864.5	25268	5	206668	-1	206544	0	3prime_fragment	FALSE	canonical	3	22	junction_2	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTTCATCTTCTGAA	NA	False	NA	NA	False	TATAAA	-2	NA	86049723	85955665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_85980431_85983522_85983671_85989399_85989553_86049673
transcript_43351.known	chr12	+	2829	7	FSM	ENSG00000133641.18	ENST00000356891.4	2829	7	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	44.7415417208164	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTCTGAATTTTTTG	-1	True	NA	16	True	AATAAA	-18	NA	88035535	88050160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_43354.known	chr12	+	2740	6	FSM	ENSG00000133641.18	ENST00000550333.5	2740	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	87.3040663428686	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGTCTGAATTTTT	-4	True	NA	14	True	AATAAA	-16	NA	88035504	88050158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_43358.known	chr12	-	1458	6	FSM	ENSG00000198707.17	ENST00000552770.3	1458	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.23832034148352	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTAACTGTCCTGT	-17	False	NA	NA	False	AGTAAA	-21	NA	88142099	88135852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_43362.known	chr12	+	7192	14	FSM	ENSG00000139324.12	ENST00000266712.11	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	13.1360653552634	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTGCCCTTTCTTA	0	True	NA	8	True	AATAAA	-19	NA	88142306	88199887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88142488_88148287_88148505_88153290_88153510_88154287_88154388_88160113_88160230_88160678_88160852_88166329_88166583_88172596_88172746_88174606_88174728_88176207_88176320_88188842_88188947_88190452_88190623_88192603_88192831_88194837
transcript_43366.known	chr12	-	5441	10	FSM	ENSG00000049130.16	ENST00000644744.1	5441	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	6.64997911442	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACCCTGTCATTTT	-2	True	NA	NA	False	AATAAA	-19	NA	88580471	88492792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88515533_88515618_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
transcript_43367.known	chr12	-	3627	3	FSM	ENSG00000139318.8	ENST00000279488.8	3627	3	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_2	32.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGAACGTACTTATAT	-4	True	NA	NA	False	AATAAA	-23	NA	89352501	89347234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89349562_89350587_89351026_89351639
transcript_43370.known	chr12	-	1959	2	FSM	ENSG00000139318.8	ENST00000308385.6	1959	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAATAAAAA	-2	True	NA	-48	True	NA	NA	NA	89352405	89348368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89349562_89351639
transcript_43379.known	chr12	-	1392	12	FSM	ENSG00000139323.14	ENST00000547496.5	1392	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	42.7537635480277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAATTCATTTTCAT	30	True	NA	NA	False	NA	NA	NA	89526000	89421153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89460015_89460039_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_4338.known	chr1	-	572	5	FSM	ENSG00000127483.19	ENST00000417710.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	136.902337452653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAGAAAGTGAAAAAAA	1024	False	NA	NA	False	AAGAAA	-2	NA	20786283	20773586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786185
transcript_43380.known	chr12	-	3024	12	FSM	ENSG00000139323.14	ENST00000313546.8	3024	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	24.2302999984839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-17	True	NA	NA	False	AATAAA	-25	NA	89526047	89419717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_43392.known	chr12	-	2207	3	FSM	ENSG00000259075.6	ENST00000547474.1	2207	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGTTAAACCCAACTAT	-5	False	NA	NA	False	AGTAAA	-17	NA	89526262	89521933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89523674_89525119_89525205_89525880
transcript_43393.known	chr12	-	5436	3	FSM	ENSG00000259075.6	ENST00000548729.5	5436	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTATTTTAGCCTAT	-4	True	NA	NA	False	AATAAA	-30	NA	89526198	89519407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89524441_89525119_89525205_89525880
transcript_43397.nic	chr12	-	1575	6	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	-344	11318	combination_of_known_junctions	FALSE	canonical	3	195	junction_2	16.7020956768904	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATAACAATTTTCTA	NA	False	NA	NA	False	AAAAAG	-11	NA	89709644	89630504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
transcript_43400.known	chr12	-	607	2	FSM	ENSG00000070961.16	ENST00000551310.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGACATAATTATAGT	337	False	NA	NA	False	TATAAA	-33	NA	89709300	89655582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89656108_89709218
transcript_43402.known	chr12	+	5699	3	FSM	ENSG00000245904.5	ENST00000499685.2	5699	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTATATGTGTACTT	-2	True	NA	NA	False	AATACA	-18	NA	92146180	92189660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_92146244_92146661_92146763_92184125
transcript_43403.known	chr12	-	4629	2	FSM	ENSG00000133639.6	ENST00000256015.5	4629	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGACTGTTATTTATGA	0	True	NA	NA	False	AATAAA	-15	NA	92145846	92140277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_92144448_92145387
transcript_43408.nic	chr12	-	2684	19	ISM	ENSG00000102189.17	ENST00000322349.13	9839	29	-46	32028	-10	0	5prime_fragment	FALSE	canonical	3	35	junction_12	10.8907311366757	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCAAGAGGAAGAAAAAAA	NA	False	NA	-4	True	NA	NA	NA	92929341	92802664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_92802735_92809016_92809157_92811278_92811435_92812979_92813094_92816199_92816401_92819307_92819512_92826165_92826286_92827911_92828062_92832511_92832851_92842464_92842582_92851110_92851267_92852174_92852297_92852911_92853026_92853914_92853955_92857274_92857341_92857430_92857486_92864859_92864988_92891628_92891722_92929042
transcript_43411.nic	chr12	-	560	4	ISM	ENSG00000102189.17	ENST00000322349.13	9839	29	-46	86809	-10	0	5prime_fragment	FALSE	canonical	3	71	junction_1	2.49443825784929	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTTCACTTAAGGTAAG	NA	False	NA	NA	False	NA	NA	NA	92929341	92857445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_92857486_92864859_92864988_92891628_92891722_92929042
transcript_43413.nnic	chr12	+	431	3	NNC	ENSG00000257345.2	novel	898	4	NA	NA	2501	-213	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	283.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTTCTTCTATGCATG	NA	False	NA	16	True	AATAAA	-16	NA	93005915	93019607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_93006014_93006093_93006230_93019410
transcript_43415.nic	chr12	+	450	2	ISM	ENSG00000257345.2	ENST00000552353.2	898	4	6759	213	2562	-213	3prime_fragment	FALSE	canonical	3	632	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTTCTTCTATGCATG	0	True	NA	16	True	AATAAA	-16	NA	93005976	93019607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_93006230_93019410
transcript_43418.known	chr12	+	9753	5	FSM	ENSG00000173598.14	ENST00000337179.9	9753	5	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_3	758.87087175619	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	NA	False	NA	NA	False	AGTAAA	-27	NA	93377882	93408146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_43421.known	chr12	+	9708	5	FSM	ENSG00000173598.14	ENST00000415493.7	9708	5	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_3	476.594363688871	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	-1	True	NA	NA	False	AGTAAA	-27	NA	93377924	93408146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_43424.known	chr12	+	3607	5	FSM	ENSG00000173598.14	ENST00000549992.5	3607	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1072.52094967884	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACATGAACTCAG	624	False	NA	0	True	AATAAA	-40	NA	93378549	93402301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_4343.known	chr1	-	473	4	FSM	ENSG00000127483.19	ENST00000437575.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	190.60838270012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCACCTGCTACTTC	-16	True	NA	-38	True	NA	NA	NA	20787323	20776697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20776751_20779811_20779912_20780349_20780541_20787194
transcript_43430.known	chr12	-	4877	4	FSM	ENSG00000177889.10	ENST00000318066.7	4877	4	0	0	0	0	multi-exon	FALSE	canonical	3	2535	junction_2	114.690888914508	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTAATATATTGTTTGTT	-16	True	NA	NA	False	AATAAA	-23	NA	93441947	93405683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93410080_93410733_93410875_93411052_93411300_93441854
transcript_43431.known	chr12	-	676	4	FSM	ENSG00000177889.10	ENST00000549490.1	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1289.38081608534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAGTATAAAGCACTGT	33	True	NA	NA	False	TTTAAA	-43	NA	93441898	93409762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93410080_93410733_93410875_93411125_93411300_93441854
transcript_43437.known	chr12	-	3018	2	FSM	ENSG00000177889.10	ENST00000550657.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	2703	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTTTGATGACTG	-12	True	NA	-21	True	ATTAAA	-17	NA	93441943	93408370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93411300_93441854
transcript_4344.nic	chr1	-	926	4	ISM	ENSG00000127483.19	ENST00000417710.5	572	5	-378	3010	5	101	5prime_fragment	FALSE	canonical	3	108	junction_3	151.540973557209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGTTATGTCTTCTT	-9	True	NA	0	True	AAAAAG	-3	NA	20786661	20776596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_20776751_20779811_20779912_20780344_20780541_20786185
transcript_43441.known	chr12	+	725	7	FSM	ENSG00000198015.14	ENST00000551396.5	725	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1075.99179055109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAGAGAAACCTATTT	24	False	NA	26	True	TATAAA	-22	NA	93467539	93501385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93467555_93469188_93469356_93470485_93470506_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_43448.known	chr12	+	1983	6	FSM	ENSG00000198015.14	ENST00000393128.8	1983	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	962.912581701994	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGCTTTGTCGATGG	1	True	NA	22	True	ATTAAA	-37	NA	93467516	93502652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93467555_93469191_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501184
transcript_4345.known	chr1	-	727	4	FSM	ENSG00000127483.19	ENST00000414993.1	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	176.522582754225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTGTAGAAGAACAAGAGA	0	True	NA	-60	True	NA	NA	NA	20786652	20776719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20776751_20779811_20779912_20780344_20780541_20786252
transcript_43455.known	chr12	+	567	5	FSM	ENSG00000198015.14	ENST00000552326.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	942.8846695116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGTAATATATAGTAAA	1	True	NA	-25	True	NA	NA	NA	93467516	93501291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93467555_93469191_93469356_93479387_93479473_93487496_93487661_93501175
transcript_43456.known	chr12	-	1134	5	FSM	ENSG00000246985.8	ENST00000662875.1	1134	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	6.01560470775798	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGGGCTTCCAATT	3077	False	NA	NA	False	AAAACA	-45	NA	93570854	93542819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93570817
transcript_43458.known	chr12	+	2761	3	FSM	ENSG00000120833.14	ENST00000340600.6	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	95	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACCTTATTTTCATG	NA	False	NA	NA	False	AATAAA	-15	NA	93569813	93576745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93570199_93572684_93573037_93574721
transcript_43459.nic	chr12	+	3870	3	NIC	ENSG00000120833.14	novel	2391	3	NA	NA	-56	0	intron_retention	FALSE	canonical	3	20	junction_1	90.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	243	False	NA	17	True	AATAAA	-20	NA	93570342	93576206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_93572376_93572684_93573037_93574721
transcript_43460.known	chr12	+	1065	3	FSM	ENSG00000120833.14	ENST00000536696.6	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	64.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTCACATAGAGTAT	-1	True	NA	NA	False	TATAAA	-31	NA	93570979	93575197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93571217_93572684_93573037_93574721
transcript_43461.known	chr12	+	2391	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	68	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	328	False	NA	17	True	AATAAA	-20	NA	93571360	93576206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93571915_93572684_93573037_93574721
transcript_43462.known	chr12	+	744	3	FSM	ENSG00000120833.14	ENST00000548091.5	744	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	100	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACGGCACTGTTCACC	291	False	NA	NA	False	NA	NA	NA	93571323	93575010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93571427_93572684_93573037_93574721
transcript_43463.nnic	chr12	+	2258	3	NNC	ENSG00000120833.14	novel	2391	3	NA	NA	-46	0	intron_retention	FALSE	canonical	2	7	junction_1	97	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	-21	True	NA	17	True	AATAAA	-20	NA	93571853	93576206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_93572275_93572684_93573037_93574721
transcript_43464.known	chr12	+	984	3	FSM	ENSG00000120833.14	ENST00000549887.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	93	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGCATCTCTGTAGG	25	True	NA	NA	False	NA	NA	NA	93571899	93575066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93572187_93572684_93573037_93574721
transcript_43466.known	chr12	+	2072	3	FSM	ENSG00000120833.14	ENST00000549206.5	2072	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	96	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	10	False	NA	-15	True	NA	NA	NA	93570398	93576174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93570666_93572684_93573037_93574721
transcript_43467.known	chr12	+	1189	3	FSM	ENSG00000169372.13	ENST00000332896.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	2.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGTTGGGTTTTTTT	4	True	NA	37	True	AATAAA	-41	NA	93677374	93850756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93677473_93678768_93679073_93849969
transcript_43468.known	chr12	+	839	3	FSM	ENSG00000169372.13	ENST00000552983.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTATTCTTTTTTG	4	True	NA	NA	False	AATAAA	-24	NA	93677374	93738636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93677473_93678768_93679073_93738199
transcript_43475.known	chr12	-	5874	4	FSM	ENSG00000057704.13	ENST00000261226.9	5874	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	8.17856276425687	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTGGAGCCCATCTC	16	True	NA	-1	True	AATAAA	-24	NA	94650557	94567121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94571738_94578393_94578530_94581621_94582539_94650352
transcript_43478.known	chr12	-	562	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	288.905982400273	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-7	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
transcript_43480.known	chr12	-	276	3	FSM	ENSG00000184752.14	ENST00000547157.1	276	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	1831.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-10	True	NA	NA	False	ATTAAA	-16	NA	95003700	94971331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94971486_95002805_95002822_95003594
transcript_43481.known	chr12	-	487	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1819.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGTCTTTCGTGCCT	-23	True	NA	NA	False	ATTAAA	-12	NA	95003713	94971335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94971621_95002738_95002822_95003594
transcript_43483.known	chr12	-	4058	14	FSM	ENSG00000120798.17	ENST00000333003.10	4058	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	20.9914042706637	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTATCCTTCGTT	-6	True	NA	NA	False	AATATA	-20	NA	95073618	95020228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_43492.known	chr12	-	9291	21	FSM	ENSG00000180263.14	ENST00000343958.9	9291	21	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_20	16.0227182462902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTGTGATTTTTT	-44	True	NA	NA	False	AATAAA	-15	NA	95217467	95076748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
transcript_43495.known	chr12	-	2232	20	FSM	ENSG00000180263.14	ENST00000451107.3	2232	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_19	23.0039139148464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAAATTGTTTTGTTA	53	True	NA	-54	True	TATAAA	-39	NA	95217482	95081397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95217224
transcript_43497.nic	chr12	-	4293	18	ISM	ENSG00000180263.14	ENST00000546711.5	4568	19	-111	4046	-93	2118	5prime_fragment	FALSE	canonical	3	79	junction_17	15.3586872276377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGCTGCTCTCAAAGAA	-40	True	NA	NA	False	NA	NA	NA	95217575	95089588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
transcript_43500.known	chr12	+	2712	13	FSM	ENSG00000028203.19	ENST00000552660.5	2712	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	107.065400573668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTTGGAAATTCTT	-1	True	NA	12	True	AATAAA	-26	NA	95217811	95300921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_43502.known	chr12	+	3002	13	FSM	ENSG00000028203.19	ENST00000547997.5	3002	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	105.613551319053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	-3	True	NA	15	True	AATAAA	-18	NA	95217760	95301172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_43511.known	chr12	+	2362	12	FSM	ENSG00000028203.19	ENST00000551994.5	2362	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	114.028269657097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	5	True	NA	NA	False	AATAAA	-3	NA	95217817	95300654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95257153_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_43513.known	chr12	+	4510	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.4814252111302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	-6	True	NA	11	True	AATAAA	-23	NA	95217806	95302799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_43526.known	chr12	+	1874	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	186.511152481561	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTCAGATCTGAGAG	2	True	NA	23	True	AATAAA	-1	NA	95474161	95514326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_43528.known	chr12	+	1836	10	FSM	ENSG00000111142.14	ENST00000261220.13	1836	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	307.926799061477	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	-10	True	NA	39	True	AATAAA	-17	NA	95474149	95514342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95474331_95476073_95476179_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_4353.known	chr1	-	6196	35	FSM	ENSG00000075151.24	ENST00000686579.1	6631	35	435	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_29	64.7435986334853	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGTAAAGTGACTT	29	True	NA	-35	True	AATAAA	-19	NA	21176850	20806482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_20982387_20982409_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
transcript_43530.known	chr12	+	2431	10	FSM	ENSG00000111142.14	ENST00000535095.5	2431	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	259.488004908431	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	NA	False	NA	39	True	AATAAA	-17	NA	95473519	95514342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95512800_95512917_95513651
transcript_43542.known	chr12	-	3161	6	FSM	ENSG00000136014.12	ENST00000393091.6	3161	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	303.738440109249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAAATTATAGGGC	-3	True	NA	74	True	AATAGA	-7	NA	95548844	95517275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
transcript_43543.known	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	233.198284727826	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	6	True	NA	-8	True	ATTAAA	-21	NA	95551476	95516559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
transcript_43544.nic	chr12	-	3585	6	NIC	ENSG00000136014.12	novel	3161	6	NA	NA	0	179	combination_of_known_junctions	FALSE	canonical	3	239	junction_5	321.637311268453	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAGCTATCTATCTAAA	-3	True	NA	NA	False	ATTAAA	-15	NA	95548844	95517096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548525
transcript_43558.nic	chr12	-	854	2	ISM	ENSG00000136014.12	ENST00000258499.8	4008	6	-29	17147	-29	57	5prime_fragment	FALSE	canonical	3	475	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAGTAAAAAGAGAAGTA	NA	False	NA	NA	False	AAAAAG	-26	NA	95551505	95533706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_95534327_95551271
transcript_43559.known	chr12	-	677	2	FSM	ENSG00000136014.12	ENST00000549639.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAACTCGTAGTGGGAGG	5	True	NA	NA	False	NA	NA	NA	95548798	95533922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95534327_95548525
transcript_43565.known	chr12	-	3621	10	FSM	ENSG00000074527.13	ENST00000343702.9	3621	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	9.1097559967865	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTCATTTCTTAAC	-1	True	NA	-1	True	AATAAA	-15	NA	95790764	95657806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95659223_95665809_95665981_95670077_95670147_95682706_95682823_95683497_95683712_95710440_95710630_95713211_95713339_95737865_95738145_95786938_95787469_95790254
transcript_43566.known	chr12	-	2014	10	FSM	ENSG00000074527.13	ENST00000674345.1	2014	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	35.3755861967746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAGTAGATGTCAAAAC	1036	False	NA	NA	False	AATAAA	-21	NA	95790330	95663390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95663634_95665809_95665981_95670077_95670147_95682706_95682823_95683497_95683712_95710440_95710630_95713211_95713339_95737865_95738145_95786938_95787469_95790254
transcript_43569.known	chr12	-	1818	9	FSM	ENSG00000074527.13	ENST00000553059.1	1818	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.6005181312376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGATGGATAGCACAT	1057	False	NA	NA	False	AAAAAG	-14	NA	95790309	95659085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95659223_95665809_95665981_95682706_95682823_95683497_95683712_95710440_95710630_95713211_95713339_95737865_95738145_95786938_95787469_95790254
transcript_43580.nic	chr12	-	1162	2	ISM	ENSG00000074527.13	ENST00000674345.1	2014	10	-434	123426	0	-34	5prime_fragment	FALSE	canonical	3	105	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTGTCATAAATTA	-1	True	NA	-1	True	AATGAA	-18	NA	95790764	95786816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_95787469_95790254
transcript_43581.known	chr12	-	396	2	FSM	ENSG00000258343.2	ENST00000551893.1	396	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATCTCACTAGTTTTT	7229	False	NA	NA	False	ATTAAA	-22	NA	95858798	95858236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95858588_95858753
transcript_43582.known	chr12	+	1389	4	FSM	ENSG00000139343.11	ENST00000266735.10	452	4	-24	-913	-24	602	multi-exon	FALSE	canonical	3	5385	junction_3	228.461521194854	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTCTTACTGCTTTT	NA	False	NA	NA	False	AATACA	-19	NA	95858927	95867053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95859077_95861167_95861294_95865323_95865389_95866004
transcript_43585.known	chr12	-	2140	19	FSM	ENSG00000111144.10	ENST00000228740.7	2140	19	0	0	0	0	multi-exon	TRUE	canonical	3	982	junction_3	162.198095618359	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTTTCTCTCAGTAT	0	True	NA	-1	True	ATTAAA	-20	NA	96035587	96000752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_43592.nic	chr12	-	2031	18	NIC	ENSG00000111144.10	novel	2140	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	395	junction_2	253.827053346133	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGGCATATTCTTTG	10	False	NA	-12	True	AATAAA	-17	NA	96035641	96000832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_43593.nic	chr12	-	1957	18	NIC	ENSG00000111144.10	novel	1908	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	395	junction_2	253.827053346133	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTTTTAGTTTTG	10	False	NA	34	True	TATAAA	-18	NA	96035641	96000906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_43600.known	chr12	+	4201	5	FSM	ENSG00000111145.8	ENST00000228741.8	4201	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	6.42261628933256	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGGTAACTGGATTGG	-12	True	NA	18	True	AATAAA	-20	NA	96194374	96269824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96194706_96223564_96223774_96246939_96247735_96259730_96259854_96267081
transcript_43601.known	chr12	-	4036	17	FSM	ENSG00000059758.8	ENST00000261211.8	4036	17	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	29.9309100262588	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCATTTGTTACATAAAG	-14	True	NA	NA	False	TATAAA	-14	NA	96400439	96278260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96280280_96280807_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
transcript_43603.known	chr12	-	2442	16	FSM	ENSG00000059758.8	ENST00000543119.6	2442	16	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_9	17.4737898961082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCATTTAAGACAGTGCT	94	False	96400496	NA	False	NA	NA	NA	96400480	96280423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
transcript_43605.known	chr12	+	724	2	FSM	ENSG00000188596.11	ENST00000554621.1	724	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTGTGGTAGGCACAC	-25	True	NA	NA	False	NA	NA	NA	96489570	96501201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96489927_96500833
transcript_43607.known	chr12	+	4015	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	39.1360021804306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	10	True	NA	6	True	ATTAAA	-18	NA	96907256	96953780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_43612.known	chr12	+	3366	15	FSM	ENSG00000139350.12	ENST00000429527.6	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	50.1101338074853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTGGTTTATAGCAT	-23	True	NA	15	True	AATAAA	-20	NA	96907223	96953351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907301_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_43614.known	chr12	+	2367	15	FSM	ENSG00000139350.12	ENST00000557644.5	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	49.2975658628294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACAGGATCTTTATTTT	55	False	NA	NA	False	ATTAAA	-34	NA	96907465	96952270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907625_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_43619.known	chr12	+	2490	14	FSM	ENSG00000139350.12	ENST00000411739.6	2490	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	48.8094956325644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAATTTTAAAATGGCA	-9	True	NA	NA	False	TTTAAA	-31	NA	96907237	96952475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907301_96907603_96907857_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_43630.known	chr12	+	1587	10	FSM	ENSG00000255794.10	ENST00000662502.1	1587	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.99228022593531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTTATCTTTTGT	483	False	NA	1	True	AATAAA	-3	NA	97465720	97565023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_97465728_97492460_97492607_97493180_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796_97561048_97564737
transcript_43636.known	chr12	+	2632	9	FSM	ENSG00000255794.10	ENST00000660138.1	2632	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.75925291729789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	33	False	NA	13	True	AATAAA	-15	NA	97465169	97565035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_43637.known	chr12	-	3311	1	FSM	ENSG00000227825.4	ENST00000554295.1	3311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATAGTGTTACACTGT	47	False	NA	NA	False	AATAAA	-33	NA	98457145	98453834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98453800_98457100
transcript_43640.known	chr12	+	4136	9	FSM	ENSG00000120802.14	ENST00000556029.6	4136	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_5	172.85163435733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATTTCTGGATAACAT	-35	True	NA	53	True	AATAAA	-21	NA	98515589	98550351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572
transcript_43644.known	chr12	+	3615	4	FSM	ENSG00000120802.14	ENST00000266732.8	3615	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	165.992637052237	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	5	True	NA	19	True	AATAAA	-21	NA	98515629	98535634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98532822
transcript_43645.known	chr12	-	3357	2	FSM	ENSG00000257167.3	ENST00000548760.2	3357	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGACTTTCCAATTTGC	67	False	NA	-13	True	AATAAA	-25	NA	98516422	98512972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98515898_98515990
transcript_43647.known	chr12	+	2374	6	FSM	ENSG00000120802.14	ENST00000393053.6	2374	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	248.323176526075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAAAAAAATTAGCT	6	True	NA	NA	False	NA	NA	NA	98515630	98548957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98546358_98546448_98547572
transcript_43650.known	chr12	+	5987	8	FSM	ENSG00000075415.15	ENST00000228318.8	5987	8	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_2	1248.67591913211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTTGAATCATTTGT	-2	True	NA	12	True	AATAAA	-9	NA	98593685	98606367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593741_98593974_98594136_98595432_98595558_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_43651.known	chr12	+	1285	8	FSM	ENSG00000075415.15	ENST00000549338.5	1285	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1025.33958535995	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTGTTGAAATAAAC	8	False	NA	-16	True	NA	NA	NA	98593695	98601674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593745_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_43657.known	chr12	+	3236	7	FSM	ENSG00000075415.15	ENST00000546766.5	3236	7	0	0	0	0	multi-exon	FALSE	canonical	3	2121	junction_1	336.071916906684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGCAGCATGTACT	8	False	NA	26	True	AGTAAA	-16	NA	98593654	98601997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593741_98593974_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_43659.known	chr12	-	1645	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	34.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	NA	False	NA	-14	True	AATAAA	-45	NA	98645113	98613404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98614341_98634295_98634414_98644522
transcript_43661.known	chr12	-	2902	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAACTTTGTTGTTTTA	-23	True	NA	NA	False	AATAAA	-17	NA	98644788	98624248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98626767_98634295_98634414_98644522
transcript_43667.known	chr12	-	1368	2	FSM	ENSG00000166130.15	ENST00000393042.3	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	72	False	NA	-14	True	AATAAA	-45	NA	98644954	98613404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98614341_98644522
transcript_43684.nic	chr12	+	845	2	ISM	ENSG00000120868.14	ENST00000547743.1	651	3	-525	459	-144	-459	5prime_fragment	FALSE	canonical	3	62	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGGAAAAAGTAAGAAA	NA	False	NA	25	True	NA	NA	NA	98645145	98648473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_98645836_98648318
transcript_43685.known	chr12	-	5198	21	FSM	ENSG00000111647.13	ENST00000279907.12	5198	21	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	16.9147864308125	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACCCTACTGAACTTA	-15	True	NA	-32	True	AATAAA	-26	NA	100142874	100037071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100037756_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_43695.known	chr12	+	1747	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	99.2613217723802	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	-1	True	NA	9	True	AATAAA	-16	NA	100200816	100224423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_43696.known	chr12	+	1659	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	94.5541643715389	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	12	True	NA	7	True	AATAAA	-14	NA	100200829	100224421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_43697.known	chr12	+	1877	11	FSM	ENSG00000075089.10	ENST00000546902.5	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	98.9725214390338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	-2	True	NA	10	True	AATAAA	-17	NA	100200815	100224424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_43705.known	chr12	-	1155	5	FSM	ENSG00000166153.17	ENST00000416321.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.4731800328267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGCAAGCCAAATC	NA	False	NA	NA	False	AATAAA	-28	NA	100267079	100252262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_43706.known	chr12	-	1033	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTGGAAATCAGAGTG	20	False	NA	-14	True	AATAAA	-22	NA	100267055	100255872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
transcript_43708.known	chr12	+	3948	19	FSM	ENSG00000136021.19	ENST00000635101.1	3948	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	45.4395881675825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGTTGTATCTTCTG	9	True	NA	18	True	AATAAA	-18	NA	100267245	100340139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317680_100317693_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_43710.known	chr12	+	5977	18	FSM	ENSG00000136021.19	ENST00000360820.7	5977	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	26.9983980045055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCATATTAAGTTGTGA	-9	True	NA	14	True	AATAAA	-18	NA	100267176	100341715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100267793_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_43716.known	chr12	+	2218	9	FSM	ENSG00000139354.11	ENST00000266754.9	2218	9	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	10.2225241501304	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATACTCATTATAAAAA	-1	True	NA	NA	False	AAGAAA	-13	NA	100573682	100624890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100573786_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_43720.known	chr12	+	9031	62	FSM	ENSG00000120800.5	ENST00000261637.5	9031	62	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_22	28.7595000253693	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTCTTCACTGTTTAA	-10	True	NA	13	True	AATAAA	-18	NA	101280104	101386618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732_101290889_101291741_101291889_101291969_101292105_101293167_101293246_101295479_101295659_101299681_101299838_101299972_101300062_101302447_101302554_101305914_101306066_101306698_101306762_101308184_101308344_101309762_101309840_101311718_101311799_101312035_101312277_101317477_101317664_101319544_101319636_101320851_101320938_101321503_101321630_101327080_101327248_101329240_101329450_101333300_101333445_101334424_101334505_101338050_101338278_101338812_101338958_101340522_101340611_101342445_101342590_101342786_101342838_101342940_101343094_101344594_101344751_101345553_101345695_101346450_101346589_101352054_101352195_101353046_101353130_101354831_101355119_101356553_101356694_101356925_101357083_101361961_101362061_101363575_101363744_101365458_101365626_101366557_101366700_101367859_101367977_101369720_101369892_101370431_101370564_101371057_101371169_101372883_101372964_101373400_101373471_101373584_101373768_101374807_101374940_101375623_101375757_101379370_101379559_101381139_101381212_101383040_101383314_101383542_101383670_101385582_101385729_101385967
transcript_43722.known	chr12	+	1585	8	FSM	ENSG00000120800.5	ENST00000551825.1	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	15.5655296821443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGAGGGTGAGGCAG	13	True	NA	NA	False	AATACA	-27	NA	101280127	101291427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732
transcript_43723.known	chr12	-	3197	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	212.245706670359	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTCCTTTCTGATC	-9	True	NA	-1	True	AATAAA	-42	NA	101407772	101393115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_43728.known	chr12	-	1231	5	FSM	ENSG00000120805.14	ENST00000539055.5	1231	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.47306871581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCTGCTAGCTTGTAA	17	True	NA	NA	False	NA	NA	NA	101407746	101394917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101407641
transcript_43731.known	chr12	+	1572	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_8	24.6373699895098	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	-26	True	NA	16	True	AATAAA	-22	NA	101697639	101729074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
transcript_43733.known	chr12	+	2001	8	FSM	ENSG00000111666.11	ENST00000549872.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_6	24.324339032906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACGAATCTTTATACTGA	6	True	NA	NA	False	AATAAA	-45	NA	101697671	101727039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293
transcript_43734.known	chr12	-	5720	21	FSM	ENSG00000111670.16	ENST00000299314.12	5720	21	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_14	22.8724725379658	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGATTTTTAAATCTT	-10	True	NA	-21	True	CATAAA	-20	NA	101830959	101745498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101747242_101749100_101749192_101753371_101753540_101757211_101757311_101757571_101757658_101760029_101760144_101761126_101761347_101761563_101761764_101764201_101765305_101766090_101766295_101768036_101768161_101770020_101770192_101770405_101770586_101770995_101771158_101780151_101780287_101780556_101780622_101786011_101786218_101788547_101788590_101789937_101790058_101796676_101796763_101830558
transcript_43738.known	chr12	-	373	2	FSM	ENSG00000111670.16	ENST00000549165.1	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGGAAAAAAAAAC	300	False	NA	NA	False	NA	NA	NA	101830679	101796510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101796763_101830558
transcript_43739.known	chr12	+	3279	7	FSM	ENSG00000136048.14	ENST00000258534.13	3279	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.93347457373532	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTGGTAATGTTGACTG	-5	True	NA	4	True	AATAAA	-14	NA	101877579	101923612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101877921_101897862_101897931_101901290_101901434_101908185_101908364_101914173_101914233_101920108_101920202_101921215
transcript_43742.known	chr12	-	865	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	49.5333781964803	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	2	True	NA	-2	True	AATAAA	-18	NA	102062079	102012941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_43743.known	chr12	-	569	6	FSM	ENSG00000120860.11	ENST00000541569.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	9.2520268049763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAATAAAAATATTTCA	28	True	NA	NA	False	AATATA	-33	NA	102061978	102025920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102026039_102039867_102039979_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_43746.known	chr12	-	2362	10	FSM	ENSG00000075188.9	ENST00000552283.6	2362	10	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_6	44.4149902400607	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTATGTGTCTGTCACG	-17	True	NA	NA	False	AATAAA	-15	NA	102120114	102073102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
transcript_43747.known	chr12	-	1158	7	FSM	ENSG00000075188.9	ENST00000551200.5	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	22.6819801212818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAACTGATTGCTTGTTT	6	True	NA	NA	False	NA	NA	NA	102120091	102076992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
transcript_43749.known	chr12	-	1203	9	FSM	ENSG00000075188.9	ENST00000251074.5	1203	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_6	45.3038353784754	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTTTCTACTCT	1670	False	NA	-16	True	AATAAA	-15	NA	102118583	102074196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362
transcript_43750.known	chr12	+	2452	12	FSM	ENSG00000185480.12	ENST00000541394.5	2452	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	150.840126629663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGGTAGACTCTTCCCAG	-11	True	NA	-78	True	NA	NA	NA	102120184	102196667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_102120287_102123885_102124042_102148229_102148464_102151569_102151801_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
transcript_43751.known	chr12	+	1916	11	FSM	ENSG00000185480.12	ENST00000392911.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	130.413227856686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTTTAAAAATACTAGT	-3	True	NA	NA	False	NA	NA	NA	102120246	102196429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_102120287_102123885_102124042_102148234_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
transcript_43754.nic	chr12	+	2947	10	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	140	junction_9	116.557515077268	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTTTGAAACTTTATTT	-23	True	NA	9	True	AATAAA	-20	NA	102120172	102197517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
transcript_4376.known	chr1	-	5067	19	FSM	ENSG00000117298.16	ENST00000374893.11	5067	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_18	31.9405794763331	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGTGTCTGGGTGTCT	-24	True	NA	-4	True	AATAAA	-15	NA	21290463	21217249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
transcript_43764.nic	chr12	+	2584	8	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	74	junction_6	143.252453054468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTTTGAAACTTTATTT	-23	True	NA	9	True	AATAAA	-20	NA	102120172	102197517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195950
transcript_43767.nic	chr12	+	2504	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	70	junction_6	134.67790794666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	-23	True	NA	8	True	AATAAA	-19	NA	102120172	102197516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102195950
transcript_4377.known	chr1	-	5099	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_18	19.9605320446669	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-9	True	NA	-1	True	AATAAA	-18	NA	21345504	21217246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
transcript_43776.known	chr12	+	992	5	FSM	ENSG00000185480.12	ENST00000543784.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	206.297115830542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAATTATGATGATTT	-1	True	NA	NA	False	TATAAA	-39	NA	102120194	102196368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_102120287_102123885_102124042_102164437_102164609_102165728_102165884_102195950
transcript_43778.known	chr12	+	976	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_2	44.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTTGTCTACGTTA	-5	True	NA	NA	False	ATTAAA	-20	NA	102120244	102149007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_102120287_102123885_102124042_102148229
transcript_43779.known	chr12	-	3759	13	FSM	ENSG00000171759.10	ENST00000553106.6	3759	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	2.77888866675551	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTTGACTTTATTTTC	-10	True	NA	NA	False	AATAAA	-21	NA	102917244	102836888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102839219_102840399_102840516_102843645_102843780_102844335_102844432_102846894_102846952_102851686_102851757_102852814_102852951_102855135_102855333_102866595_102866664_102877461_102877551_102894734_102894919_102912790_102912899_102917070
transcript_43781.known	chr12	-	7244	14	FSM	ENSG00000111696.12	ENST00000392876.8	7244	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7.53060815416641	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGTTTATTGTCAGT	-7	True	NA	-10	True	AATAAA	-14	NA	103841234	103772309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103778082_103780299_103780365_103785334_103785476_103787440_103787528_103788837_103788920_103793163_103793266_103793409_103793513_103793936_103793998_103796893_103797032_103798586_103798678_103806321_103806378_103806854_103806930_103814936_103815122_103840948
transcript_43783.known	chr12	+	2816	19	FSM	ENSG00000166598.16	ENST00000680370.1	2816	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1830.62059908048	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	13	True	NA	9	True	AATAAA	-11	NA	103930409	103947922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103931710_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_43789.known	chr12	+	2782	18	FSM	ENSG00000166598.16	ENST00000299767.10	2782	18	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	637.02192604027	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTCTTGACTGTCTT	13	True	NA	13	True	AATAAA	-15	NA	103930409	103947926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_43794.known	chr12	+	2570	18	FSM	ENSG00000166598.16	ENST00000681698.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1448.09842378987	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	16	True	NA	9	True	AATAAA	-11	NA	103930412	103947922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103934160_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_43797.known	chr12	+	2646	18	FSM	ENSG00000166598.16	ENST00000680316.1	2646	18	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	1425.28877423679	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	116	False	NA	9	True	AATAAA	-11	NA	103930599	103947922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930623_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_43800.known	chr12	+	2831	17	FSM	ENSG00000166598.16	ENST00000681861.1	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	593.595502925814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGTGAAATTTACAT	794	False	NA	NA	False	AAAAAG	-45	NA	103930331	103947695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310
transcript_43801.known	chr12	+	3248	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	654.688749998807	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	820	False	NA	9	True	AATAAA	-11	NA	103930357	103947922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_43804.known	chr12	+	3458	17	FSM	ENSG00000166598.16	ENST00000681910.1	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_6	656.232321190446	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	-14	True	NA	9	True	AATAAA	-11	NA	103930382	103947922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_43808.known	chr12	+	3903	16	FSM	ENSG00000166598.16	ENST00000680653.1	3903	16	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_6	675.854836484877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	818	False	NA	9	True	AATAAA	-11	NA	103930355	103947922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_43826.known	chr12	+	1204	7	FSM	ENSG00000166598.16	ENST00000640977.2	1204	7	0	0	0	0	multi-exon	FALSE	canonical	3	4584	junction_3	392.088708783555	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGATTTGAAGTCAGCT	825	False	NA	NA	False	NA	NA	NA	103930362	103938535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339
transcript_43831.known	chr12	+	3128	5	FSM	ENSG00000166598.16	ENST00000540297.7	3128	5	0	0	0	0	multi-exon	FALSE	canonical	3	4584	junction_3	442.58071297787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTACTC	825	False	NA	NA	False	AATAAA	-33	NA	103930362	103936519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955
transcript_43833.known	chr12	-	620	5	FSM	ENSG00000204954.10	ENST00000549960.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	27.5079533953364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATGTTTAGCCGA	37	True	NA	54	True	NA	NA	NA	103957134	103951409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103953413_103953535_103954874_103954969_103956630_103956749_103957068
transcript_43834.known	chr12	-	1243	4	FSM	ENSG00000204954.10	ENST00000547975.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	21.483844059096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTTTATTTCATTAA	-10	True	NA	-3	True	ATTAAA	-25	NA	103957181	103950739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103953413_103953535_103956630_103956749_103957068
transcript_43839.known	chr12	-	1702	3	FSM	ENSG00000204954.10	ENST00000378090.9	1702	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-44	True	NA	NA	False	ATTAAA	-31	NA	103957215	103950193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103956630_103956749_103957068
transcript_43845.known	chr12	-	1446	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCATCTTTATTTC	-19	True	NA	-8	True	ATTAAA	-20	NA	103957190	103950744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103956630
transcript_43849.known	chr12	+	3183	10	FSM	ENSG00000139372.15	ENST00000392872.8	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_6	65.4309550330974	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	-16	True	NA	17	True	AATAAA	-26	NA	103965871	103988874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_43852.known	chr12	+	1387	9	FSM	ENSG00000139372.15	ENST00000544861.5	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	155.69682077679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGTAATTGTAATGTA	1	True	NA	NA	False	NA	NA	NA	103965844	103987194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_43855.known	chr12	+	1139	3	FSM	ENSG00000139372.15	ENST00000544060.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	6.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATAACAGCAAA	15	True	NA	NA	False	CATAAA	-14	NA	103965902	103980668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103976917_103977061_103979830
transcript_43856.nic	chr12	+	400	2	ISM	ENSG00000139372.15	ENST00000544060.1	1139	3	-99	3608	-18	-3413	5prime_fragment	FALSE	canonical	3	578	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTCACCATGAGAGCT	-7	True	NA	NA	False	NA	NA	NA	103965803	103977060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_103966061_103976917
transcript_43857.known	chr12	+	862	2	FSM	ENSG00000139372.15	ENST00000545698.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAACTGTAAGAAACAT	-2	True	NA	NA	False	NA	NA	NA	103965841	103980473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103979830
transcript_43858.known	chr12	-	1927	11	FSM	ENSG00000120820.13	ENST00000360814.9	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	14.8848916690717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-35	True	NA	-8	True	AATAAA	-17	NA	104050187	103988986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_43860.known	chr12	-	1835	11	FSM	ENSG00000120820.13	ENST00000548660.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.1537874836079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAAATTATACCT	NA	False	NA	-2	True	TATAAA	-12	NA	104064183	103989279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894_104050289_104063948
transcript_43863.known	chr12	-	3508	9	FSM	ENSG00000120837.8	ENST00000551446.6	3508	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	265.099509618558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTAACCTATCATAAAAA	-1	True	NA	-38	True	NA	NA	NA	104138241	104117117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104131753_104131839_104135447_104135533_104138140
transcript_43865.known	chr12	-	3424	8	FSM	ENSG00000120837.8	ENST00000240055.8	3424	8	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_7	65.09083135535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAACATTGCTTTCT	-18	True	NA	-6	True	CATAAA	-15	NA	104138210	104117085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104138140
transcript_43874.known	chr12	+	3974	15	FSM	ENSG00000198431.17	ENST00000526691.5	3974	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	139.318549243327	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	174	False	NA	13	True	ATTAAA	-20	NA	104286880	104350283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104287347_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_43876.known	chr12	+	3930	15	FSM	ENSG00000198431.17	ENST00000503506.6	3930	15	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	90.0923562410331	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATATCCACGTGTGCCT	NA	False	NA	7	True	ATTAAA	-14	NA	104286681	104350277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104287110_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_43878.nic	chr12	+	3545	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	132.224258129399	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	256	False	NA	13	True	ATTAAA	-20	NA	104286962	104350283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_43879.nic	chr12	+	3723	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	150.096812938976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	-16	True	NA	13	True	ATTAAA	-20	NA	104287021	104350283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_43888.known	chr12	+	400	5	FSM	ENSG00000198431.17	ENST00000526580.5	400	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	201.162092601961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGAATCACATTGGCT	19	True	NA	NA	False	NA	NA	NA	104287056	104318943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912
transcript_43889.known	chr12	+	3860	17	FSM	ENSG00000198431.17	ENST00000525566.6	3860	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	222.073150954815	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCTTGGGAGTCTTT	0	True	NA	37	True	ATTAAA	-44	NA	104215778	104350307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104215894_104251526_104251679_104258018_104258080_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_43890.known	chr12	+	528	1	FSM	ENSG00000213442.5	ENST00000462885.1	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	611	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCAGGGCCCTCGTCC	3	True	NA	-49	True	NA	NA	NA	104265308	104265836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104265300_104265800
transcript_43891.known	chr12	+	1467	1	FSM	ENSG00000255150.2	ENST00000527879.2	1467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGATATTTGATAATT	-28	True	NA	11	True	AATAAA	-21	NA	104303738	104305205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104303700_104305200
transcript_43892.known	chr12	+	5734	3	FSM	ENSG00000171310.11	ENST00000303694.6	5734	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	17	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTGTGTATGGTT	1	True	NA	8	True	ATTAAA	-16	NA	104456947	104762014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457530_104601905_104601992_104756948
transcript_43893.known	chr12	+	5696	3	FSM	ENSG00000171310.11	ENST00000549260.5	5696	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	16.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTGTGTATGGTT	-6	True	NA	8	True	ATTAAA	-16	NA	104456970	104762014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457515_104601905_104601992_104756948
transcript_43894.known	chr12	+	936	2	FSM	ENSG00000171310.11	ENST00000547956.1	936	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAATTAAAGGTCCACCG	-9	True	NA	NA	False	NA	NA	NA	104456967	104602279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457530_104601905
transcript_43895.known	chr12	+	756	2	FSM	ENSG00000171310.11	ENST00000546689.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCATCTCTGAAAAATC	-3	True	NA	NA	False	NA	NA	NA	104457000	104602147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457515_104601905
transcript_43899.nic	chr12	+	3203	30	ISM	ENSG00000136051.15	ENST00000332180.10	5791	33	-19	6328	-2	0	5prime_fragment	TRUE	canonical	3	154	junction_9	27.822223129741	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATTGGAGCTGCCTT	-35	True	NA	NA	False	AATAAA	-4	NA	105107711	105162802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748
transcript_43905.known	chr12	+	23524	4	FSM	ENSG00000151131.11	ENST00000552951.7	23524	4	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_3	37.1423687391576	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTCCTTCTCTTTA	-4	True	NA	13	True	AATAAA	-16	NA	104986315	105017625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104986468_104988166_104988254_104991711_104991849_104994477
transcript_43906.known	chr12	+	291	6	FSM	ENSG00000235162.9	ENST00000549934.2	291	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	259.43985815599	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACAGACATTTCCAAGG	6	True	NA	NA	False	NA	NA	NA	105330867	105370680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_105330938_105348601_105348627_105365806_105365843_105366616_105366697_105367476_105367510_105370633
transcript_43910.known	chr12	+	1329	5	FSM	ENSG00000235162.9	ENST00000612117.4	1329	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	276.701441087682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACATTTCTTAATTATT	NA	False	NA	11	True	ATTAAA	-19	NA	105330635	105371517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_105330938_105348601_105348627_105366616_105366697_105367471_105367510_105370633
transcript_43918.known	chr12	-	2190	21	FSM	ENSG00000136044.12	ENST00000551662.5	2190	21	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	40.6648189470948	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTTGTGGAATGTAAT	49	True	NA	NA	False	NA	NA	NA	105236083	105174207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208048_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_43924.nnic	chr12	-	3078	20	NIC	ENSG00000136044.12	novel	3171	21	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	40.3687984611466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	-4	True	NA	-7	True	AATAAA	-31	NA	105236222	105173299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_105174449_105176034_105176083_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_43929.nic	chr12	-	1438	14	ISM	ENSG00000136044.12	ENST00000258530.8	3171	21	-48	21974	-19	2490	5prime_fragment	FALSE	canonical	3	156	junction_5	13.8333273924086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATGCCCCAGGTAACTA	-4	True	NA	NA	False	AAGAAA	-1	NA	105236222	105195273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_4393.known	chr1	+	4401	18	FSM	ENSG00000142794.19	ENST00000318220.10	4401	18	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	12.0758846309236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTTCTAATCTCT	17	True	NA	NA	False	AATAAA	-16	NA	21440136	21485005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21440349_21444947_21445220_21466086_21466157_21466995_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_43934.known	chr12	-	5744	7	FSM	ENSG00000074590.14	ENST00000261402.7	5744	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	5.8878405775519	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGACCTTGCTTCTTTA	0	True	NA	-6	True	AATAAA	-16	NA	106138954	106063344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106067956_106070773_106070907_106072723_106072844_106083863_106083930_106086733_106086886_106106404_106106526_106138413
transcript_43945.nnic	chr12	-	2886	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-53	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	337	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCAGAGTGGTTACAT	981	False	NA	-16	True	AATAAA	-20	NA	106248073	106237880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247571_106247858
transcript_43951.nnic	chr12	-	2938	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-217	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	337	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCGAAAAGTAAAAAAAAAA	817	False	NA	-128	True	NA	NA	NA	106248237	106237992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247571_106247858
transcript_43953.nnic	chr12	-	2964	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-121	-112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	337	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCGAAAAGTAAAAAAAAAA	913	False	NA	-128	True	NA	NA	NA	106248141	106237992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247572_106247737
transcript_43958.known	chr12	+	4183	28	FSM	ENSG00000013503.10	ENST00000228347.9	4183	28	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_11	9.50820885684023	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGCTGCTTTGTCAT	8	True	NA	8	True	NA	NA	NA	106357747	106510198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106357952_106363869_106363903_106366515_106366573_106366657_106366723_106369274_106369351_106369582_106369684_106376358_106376451_106378266_106378385_106380030_106380140_106393030_106393154_106405856_106405977_106410825_106410961_106427196_106427359_106430272_106430474_106432317_106432481_106433718_106433873_106437056_106437132_106437680_106437780_106444462_106444591_106454501_106454712_106457137_106457297_106459250_106459369_106463477_106463621_106496054_106496159_106496751_106496919_106501322_106501437_106504080_106504255_106509419
transcript_43964.known	chr12	+	3389	13	FSM	ENSG00000111785.21	ENST00000462949.5	3389	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	80.9771915761195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGTGTGTTTCTTTA	-1	True	NA	16	True	AATAAA	-25	NA	106774713	106887290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106874480_106874568_106878986_106879126_106879774_106879948_106885903
transcript_43966.known	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	58.1984684368503	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	4	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
transcript_43968.known	chr12	+	2134	9	FSM	ENSG00000111785.21	ENST00000470628.2	2134	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	46.3301670081169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCCTTCCCCTCTTGCT	31	False	NA	NA	False	NA	NA	NA	106774745	106871505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822
transcript_43969.known	chr12	+	2440	9	FSM	ENSG00000111785.21	ENST00000392839.6	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	41.7041289922233	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAACACACACATCCTC	50	False	NA	NA	False	NA	NA	NA	106774639	106886786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106885903
transcript_43975.nic	chr12	+	1105	3	ISM	ENSG00000111785.21	ENST00000470628.2	2134	9	-105	55942	1	597	5prime_fragment	FALSE	canonical	3	203	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTCTCTTTTTAAGAG	51	False	NA	23	True	AATATA	-16	NA	106774640	106815563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_106774830_106783996_106784045_106814695
transcript_43976.known	chr12	+	925	5	FSM	ENSG00000151135.10	ENST00000550344.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.2723930468376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTAAGTTCCAGGTT	-1	True	NA	NA	False	AAAAAG	-36	NA	106955866	106971576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106957081_106957150_106959269_106959386_106967110_106967181_106971104
transcript_43977.known	chr12	+	811	5	FSM	ENSG00000151135.10	ENST00000547242.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	42.7697322881498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTAAATTATGGACTA	32	False	NA	NA	False	AATATA	-45	NA	106955827	106971441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106957081_106957150_106959287_106959386_106967110_106967181_106971104
transcript_43978.known	chr12	+	3228	4	FSM	ENSG00000151135.10	ENST00000280756.9	3228	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	21.013223349966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATCTTACCATTTTTAG	-4	True	NA	10	True	AATAAA	-17	NA	106955906	106974035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106957081_106957150_106967110_106967181_106971104
transcript_43980.known	chr12	+	3349	3	FSM	ENSG00000151135.10	ENST00000548125.5	3349	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCTTACCATTTTTAGT	NA	False	NA	11	True	AATAAA	-18	NA	106955718	106974036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106967110_106967181_106971104
transcript_43981.known	chr12	-	418	3	FSM	ENSG00000120832.10	ENST00000550496.1	418	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATACAACTGATAAACAG	-23	True	NA	NA	False	AATACA	-22	NA	106987122	106978614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106978768_106985114_106985226_106986968
transcript_43984.known	chr12	-	3235	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTGCTTCTTTCTAG	24	False	106987150	1	True	ATTAAA	-22	NA	106987126	106977548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106978772_106985114
transcript_43985.known	chr12	-	2987	13	FSM	ENSG00000008405.12	ENST00000008527.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_12	18.6741056605724	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTACGTGTTTTTTT	-8	True	NA	-5	True	ATTAAA	-19	NA	107093549	106991363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106992002_106992786_106992891_106992964_106993037_106997293_106997387_106997487_106997691_106997914_106998067_106999550_106999863_106999941_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
transcript_4399.known	chr1	+	3767	15	FSM	ENSG00000142794.19	ENST00000318249.10	3767	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	14.0670769195745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	17	True	NA	NA	False	ATTAAA	-16	NA	21440136	21484900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21440349_21444947_21445220_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_43993.known	chr12	+	811	7	FSM	ENSG00000151136.15	ENST00000494235.2	811	7	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	15.4560308258262	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCCTAGTGCAGGGAATG	3	False	NA	NA	False	NA	NA	NA	107634831	107657718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_107634959_107635284_107635391_107640310_107640414_107642089_107642172_107649205_107649275_107651673_107651788_107657508
transcript_43997.known	chr12	+	2549	15	FSM	ENSG00000136045.12	ENST00000412830.8	2549	15	0	0	0	0	multi-exon	TRUE	canonical	3	687	junction_8	51.8379047353087	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTATTCTGTTTCTTTGTT	8	True	NA	12	True	ATTAAA	-15	NA	107685798	107713162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466_107697598_107699372_107699435_107702934_107703032_107703684_107703747_107704635_107704748_107708925_107709017_107709110_107709233_107710404_107710511_107712110
transcript_44.known	ERCC-00126	+	1111	1	FSM	ERCC-00126A	DQ459427	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00126_+_0_1100
transcript_44005.known	chr12	+	851	7	FSM	ENSG00000136045.12	ENST00000552760.5	851	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	301.278064621741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGGAAAGAAGG	11	True	NA	NA	False	AGTAAA	-15	NA	107685801	107697578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692971_107693097_107696473_107696585_107697466
transcript_44006.nic	chr12	+	865	7	ISM	ENSG00000136045.12	ENST00000412830.8	2549	15	-33	15578	-33	0	5prime_fragment	FALSE	canonical	3	767	junction_2	36.1324723144647	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAGAAGGTAAAGA	-25	True	NA	NA	False	AGTAAA	-21	NA	107685765	107697584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466
transcript_44013.known	chr12	-	4182	12	FSM	ENSG00000110851.12	ENST00000228437.10	4182	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	8.48625529462906	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTCCTCTGGTAGTCT	-7	True	NA	NA	False	ATTAAA	-20	NA	107761137	107732870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_107734523_107739382_107739552_107740945_107741261_107742220_107742349_107743196_107743283_107744542_107744662_107746274_107746425_107751414_107752210_107753923_107754110_107756831_107756966_107760504_107760772_107760956
transcript_4403.known	chr1	+	2133	14	FSM	ENSG00000142794.19	ENST00000454000.6	2133	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	13.8820048685915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGGAAGCCCAGTCATA	8	True	NA	NA	False	AATGAA	-11	NA	21440127	21483467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21440349_21444947_21445220_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_44035.known	chr12	+	5082	9	FSM	ENSG00000075035.10	ENST00000547525.6	5082	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.46410161513775	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTGTGAGAAGCTGCC	-13	True	NA	NA	False	NA	NA	NA	108129287	108250537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108129927_108195281_108196215_108206288_108206404_108210120_108210306_108224738_108224861_108226989_108227165_108232730_108232896_108240343_108240545_108247990
transcript_44039.known	chr12	-	632	3	FSM	ENSG00000174600.14	ENST00000550573.5	632	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCACCGCAGCGTTCG	-10	True	NA	NA	False	NA	NA	NA	108320662	108292521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108292960_108293588_108293665_108320544
transcript_44040.known	chr12	-	5488	4	FSM	ENSG00000174600.14	ENST00000550402.6	5488	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTGGCTCAGTTCTG	6	True	NA	-1	True	AATAAA	-14	NA	108339311	108288045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108292960_108293588_108293665_108329994_108330208_108339026
transcript_44043.known	chr12	-	4154	19	FSM	ENSG00000075856.12	ENST00000546815.6	4154	19	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_10	43.389564655429	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTTCCAGCATTCCTC	-4	True	NA	-3	True	AATAAA	-18	NA	108561173	108522213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_44044.known	chr12	-	3704	19	FSM	ENSG00000075856.12	ENST00000228284.8	3704	19	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_15	77.5018916535367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGTTCTCTTCAAAAC	10	True	NA	-39	True	NA	NA	NA	108561159	108522703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_44049.known	chr12	-	2834	18	FSM	ENSG00000075856.12	ENST00000431469.6	2834	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	89.5495069045677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGACCTCCCACCACCCAG	10	True	NA	NA	False	NA	NA	NA	108561159	108523411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_44055.nic	chr12	-	1903	15	ISM	ENSG00000075856.12	ENST00000546815.6	4154	19	-37	7996	-37	0	5prime_fragment	FALSE	canonical	3	284	junction_6	37.652004852169	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAGGCCCAGAGAAGC	4197	False	NA	NA	False	AAAAAG	-9	NA	108561210	108530209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_44060.known	chr12	+	3255	3	FSM	ENSG00000198855.7	ENST00000552695.6	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	1.5	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGACTGTCTTATTT	-14	True	NA	NA	False	AATAAA	-19	NA	108515276	108521210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108515362_108516914_108517274_108518399
transcript_44064.known	chr12	-	3637	19	FSM	ENSG00000075856.12	ENST00000546728.5	3637	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	86.674234000112	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGACGTTCTCTTCA	8	True	NA	-43	True	NA	NA	NA	108561161	108522707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538944_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_44065.known	chr12	+	1069	6	FSM	ENSG00000136003.16	ENST00000392807.8	1069	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	591.362968066145	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	2	True	NA	11	True	AATAAA	-15	NA	108562605	108569368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_44067.known	chr12	+	1330	5	FSM	ENSG00000136003.16	ENST00000535729.5	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	568.710548082238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCAGTTCTATAGAAGA	-3	True	NA	NA	False	AAGAAA	-9	NA	108562600	108568547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657
transcript_44068.known	chr12	+	983	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	86.2699252346958	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	-8	True	NA	11	True	AATAAA	-15	NA	108562595	108569368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_44071.known	chr12	+	1071	4	FSM	ENSG00000136003.16	ENST00000539593.1	1071	4	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	57.5171472017017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTCTCAGGGAAAGAAG	6	True	NA	NA	False	ATTAAA	-26	NA	108562609	108567908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189
transcript_44073.known	chr12	+	3685	4	FSM	ENSG00000136003.16	ENST00000545932.5	3685	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	635.925222717961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAAAATAATGG	-22	True	NA	-16	True	CATAAA	-28	NA	108562581	108569341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108564393_108565320_108565432_108567189_108567269_108567657
transcript_44074.known	chr12	+	795	6	FSM	ENSG00000136003.16	ENST00000547005.5	795	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	646.179232102054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCTTTCAGCCCACTT	-3	True	NA	24	True	AATACA	-24	NA	108562600	108569099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657_108567744_108568830
transcript_44075.known	chr12	-	2662	2	FSM	ENSG00000183160.9	ENST00000392806.4	2662	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCACCAGTTTTC	-20	True	NA	-2	True	AATAAA	-14	NA	108598084	108589850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108592398_108597969
transcript_44080.known	chr12	-	3814	11	FSM	ENSG00000110880.11	ENST00000261401.8	3814	11	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	65.0073841959512	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTGTGTTTATTTCA	6	True	NA	NA	False	GATAAA	-18	NA	108731518	108645108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_44096.known	chr12	-	13034	15	FSM	ENSG00000084112.15	ENST00000326495.10	13034	15	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_5	11.4866826173191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGTTGTTCAGTATGA	-4	True	NA	NA	False	AATAAA	-18	NA	108857583	108778190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108789245_108792285_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108852637_108852679_108857427
transcript_44101.known	chr12	-	2354	14	FSM	ENSG00000084112.15	ENST00000551165.5	2354	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	11.4633452370444	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTATCGATATATGACT	29	False	NA	-6	True	ATTAAA	-26	NA	108857590	108791918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108852637_108852679_108857427
transcript_44108.known	chr12	+	3749	13	FSM	ENSG00000135093.13	ENST00000257548.10	3749	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	7.83643555592861	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGGTGTTCTTTTGTA	-22	True	NA	NA	False	AATAAA	-24	NA	109052575	109088023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109052762_109056681_109056792_109057925_109058109_109067523_109067628_109071611_109071711_109072304_109072351_109073437_109073533_109081333_109081394_109081932_109082020_109082662_109082744_109082842_109083063_109084952_109085074_109085666
transcript_44116.known	chr12	-	1030	4	FSM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	35.4055865020699	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5	True	NA	-2	True	AATAAA	-17	NA	109093472	109088188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092788_109093246
transcript_44118.known	chr12	-	1180	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	27.9404127862612	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5	True	NA	-2	True	AATAAA	-17	NA	109093472	109088188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
transcript_44119.nic	chr12	-	1092	4	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	54.1623075169029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-10	True	NA	-2	True	AATAAA	-17	NA	109093487	109088188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_109088513_109090008_109090208_109092506_109092938_109093349
transcript_44122.nic	chr12	-	1014	3	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	5729	False	NA	-1	True	AATAAA	-18	NA	109093504	109088187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_109088513_109092506_109092938_109093246
transcript_44123.nic	chr12	-	1504	3	ISM	ENSG00000189046.11	ENST00000343075.7	1030	4	-15	0	1	0	intron_retention	FALSE	canonical	3	121	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-10	True	NA	-2	True	AATAAA	-17	NA	109093487	109088188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_109088513_109090008_109090208_109092506
transcript_44126.known	chr12	+	2048	7	FSM	ENSG00000076248.11	ENST00000242576.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_1	107.67917883953	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	8	True	NA	22	True	AATAAA	-16	NA	109097596	109110992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109097812_109098431_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_44133.known	chr12	+	2130	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_5	54.2202914046024	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTAAAAGTTTGT	404	False	NA	5	True	NA	NA	NA	109098117	109110975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_44136.known	chr12	+	2016	5	FSM	ENSG00000076248.11	ENST00000446767.2	2016	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	424.724322355101	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	-30	True	NA	22	True	AATAAA	-16	NA	109098150	109110992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109098639_109099188_109099285_109102838_109102928_109103432_109103612_109109828
transcript_44138.known	chr12	+	498	3	FSM	ENSG00000076248.11	ENST00000540158.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_1	174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACACTGGAGTTAAGCCA	56	False	NA	NA	False	TTTAAA	-4	NA	109097678	109099346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109097812_109098431_109098639_109099188
transcript_44143.known	chr12	-	3920	7	FSM	ENSG00000110906.13	ENST00000228495.11	3920	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	41.4705384044572	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGGCTCTTTTC	9	True	NA	-5	True	AATAAA	-15	NA	109477300	109448654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109460635_109460806_109469514_109469729_109477259
transcript_44147.known	chr12	-	2493	6	FSM	ENSG00000110906.13	ENST00000440541.6	2493	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	106.608442442426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATGTCAAAATCGTGT	NA	False	NA	-19	True	AATAAA	-18	NA	109477359	109449970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109469514_109469729_109477259
transcript_44148.known	chr12	-	491	5	FSM	ENSG00000110906.13	ENST00000540355.5	491	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	117.467016647227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGGACGAGGAGCGGGA	NA	False	NA	NA	False	NA	NA	NA	109458871	109451681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109458848
transcript_44149.known	chr12	-	708	2	FSM	ENSG00000110906.13	ENST00000538377.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCATGTGTGTATATGT	9	True	NA	NA	False	NA	NA	NA	109477300	109469061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109469729_109477259
transcript_44150.known	chr12	-	3096	4	FSM	ENSG00000110906.13	ENST00000540089.5	3096	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	28.2410261066335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGTGTATTGGGCAGA	NA	False	NA	-9	True	AATAAA	-28	NA	109458985	109449960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991
transcript_44151.known	chr12	+	5730	28	FSM	ENSG00000151148.14	ENST00000342494.8	5730	28	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_15	46.2551817436104	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTGCGTTCTGCATT	-1	True	NA	14	True	ATTAAA	-17	NA	109477633	109536702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109491044_109491128_109497817_109497924_109498232_109498354_109499632_109499811_109501370_109501535_109503022_109503191_109507563_109507736_109509595_109509715_109510343_109510459_109511203_109511304_109516764_109516885_109521147_109521325_109521440_109521552_109523977_109524116_109524437_109524504_109526357_109526417_109529889_109530073_109530546_109530659_109533465_109533559_109534590
transcript_44152.known	chr12	+	5620	28	FSM	ENSG00000151148.14	ENST00000434735.6	5620	28	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_15	45.870994627849	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCGTTCTGCATTTCA	7	True	NA	17	True	ATTAAA	-20	NA	109477401	109536705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109491044_109491128_109497817_109497924_109498232_109498354_109499632_109499811_109501370_109501535_109503022_109503191_109507563_109507736_109509595_109509715_109510343_109510459_109511203_109511304_109516764_109516885_109521147_109521325_109521440_109521552_109523977_109524116_109524437_109524504_109526357_109526417_109529889_109530073_109530546_109530659_109533465_109533559_109534590
transcript_44162.known	chr12	+	1448	9	FSM	ENSG00000151148.14	ENST00000340074.9	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	48.2686168747355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	17	True	NA	7	True	ATTAAA	-17	NA	109477651	109490722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_44164.known	chr12	+	1541	9	FSM	ENSG00000151148.14	ENST00000540230.5	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	63.4821579264599	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGCATGTTCTTGAA	18	False	NA	NA	False	AAGAAA	-11	NA	109477652	109491149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109477777_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_44177.known	chr12	+	2833	11	FSM	ENSG00000110921.14	ENST00000228510.8	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	17.8672885463911	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTAGGCGTGTTTA	-9	True	NA	NA	False	CATAAA	-31	NA	109573793	109598125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_44181.known	chr12	+	1770	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	33.505481401565	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	34	True	NA	14	True	AATAAA	-16	NA	109573836	109597261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_44183.nic	chr12	+	1830	10	NIC	ENSG00000110921.14	novel	2833	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	34.9571165858971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACTCCAGGCCACCA	-13	True	NA	16	True	AATAAA	-18	NA	109573789	109597263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_109573874_109574808_109574901_109575997_109576146_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_44186.known	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	65.9848467452945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	9	True	NA	-6	True	AATAAA	-11	NA	109573503	109556702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_44191.known	chr12	+	1644	9	FSM	ENSG00000110921.14	ENST00000447878.6	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	35.3579906103274	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAAAAAGATTTTGT	-10	True	NA	-11	True	NA	NA	NA	109573792	109597236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_44192.known	chr12	-	4090	9	FSM	ENSG00000139428.12	ENST00000545712.7	4090	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	19.4321737075398	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	8	True	NA	NA	False	AATAAA	-40	NA	109573504	109553714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_44205.known	chr12	+	702	5	FSM	ENSG00000110921.14	ENST00000545774.5	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	48.7461536944198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCCTGTATTTGCTTA	29	True	NA	NA	False	NA	NA	NA	109573831	109587069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753
transcript_44207.known	chr12	-	3228	16	FSM	ENSG00000111199.12	ENST00000261740.7	3228	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	4.70271789027957	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCAGGATGATGGCA	-9	True	NA	-2	True	AATAAA	-20	NA	109833398	109783088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109783779_109784315_109784438_109786709_109786838_109788399_109788717_109792362_109792430_109792651_109792818_109793526_109793601_109793929_109794023_109794328_109794488_109796524_109796705_109798613_109798913_109800617_109800759_109802990_109803144_109808295_109808469_109814410_109814828_109833349
transcript_44221.known	chr12	-	583	6	FSM	ENSG00000139433.11	ENST00000536390.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	107.136548385693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTGCCTGGAGAAGATC	5	True	NA	NA	False	NA	NA	NA	109880383	109852664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858139_109858194_109858682_109858742_109880271
transcript_44222.nnic	chr12	-	2273	6	NNC	ENSG00000139433.11	novel	973	6	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.3093500144302	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCTGTGCACTGTATT	NA	False	NA	-12	True	AATAAA	-19	NA	109880562	109850947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_109851863_109852014_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_44223.known	chr12	-	973	6	FSM	ENSG00000139433.11	ENST00000537066.2	973	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	107.136548385693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCCCACTGCTGGACAC	10	True	NA	NA	False	NA	NA	NA	109880378	109852554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109857854_109858194_109858682_109858742_109880271
transcript_44224.known	chr12	-	560	5	FSM	ENSG00000139433.11	ENST00000540772.1	560	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	97.5893821068665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGACACGTCCCCGACT	214	False	NA	NA	False	NA	NA	NA	109880325	109852544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855739_109857525_109857660_109858682_109858742_109880271
transcript_44225.known	chr12	-	2407	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	6.83282518435822	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-2	True	NA	-9	True	AATAAA	-22	NA	109880541	109850944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_44228.known	chr12	-	914	5	FSM	ENSG00000139433.11	ENST00000544393.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	97.1570892935765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCTAATGAGTCAAGTC	9	True	NA	-20	True	NA	NA	NA	109880421	109852260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857582_109857660_109858682_109858742_109880271
transcript_4423.known	chr1	+	2536	12	FSM	ENSG00000162551.14	ENST00000374840.8	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_9	61.941054357155	3633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGAGTCTTTGTGGT	-2	True	NA	35	True	AATAAA	-23	NA	21509422	21578410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_44233.known	chr12	-	5598	20	FSM	ENSG00000139436.22	ENST00000355312.8	5598	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	25.8963414137009	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	-5	True	NA	-11	True	AATAAA	-16	NA	109996368	109929803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_44236.known	chr12	-	5444	19	FSM	ENSG00000139436.22	ENST00000361006.9	5444	19	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	21.1479940968638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	10	True	NA	-11	True	AATAAA	-16	NA	109996304	109929803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_44237.known	chr12	-	5387	19	NNC	ENSG00000139436.22	novel	5598	20	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_10	37.6989373397077	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTAATGCTGTGCTC	3067	False	NA	-9	True	AATAAA	-18	NA	109996389	109929801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109965759_109965766_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_44238.known	chr12	-	2127	19	FSM	ENSG00000139436.22	ENST00000551209.5	2127	19	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_6	33.9709843510278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGCAGGGCACCGCCTC	-2	True	NA	NA	False	NA	NA	NA	109996224	109932977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965575_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_44246.known	chr12	-	2989	15	FSM	ENSG00000139436.22	ENST00000547815.5	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	22.3373942901465	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAATGGGAGAAGCGAG	18	True	NA	NA	False	NA	NA	NA	109996296	109947321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_44247.known	chr12	+	3096	13	FSM	ENSG00000139437.18	ENST00000405876.9	3096	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	6.12542515531235	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTGGCTTTGTTAC	-6	True	NA	23	True	AATAAA	-18	NA	109900273	109918069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571_109906641_109907525_109907700_109908585_109908699_109908870_109908938_109911062_109911236_109912990_109913073_109914441_109914628_109915402_109915547_109916590
transcript_44249.known	chr12	-	2014	14	FSM	ENSG00000139436.22	ENST00000551455.5	2014	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	13.459560294215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGGAGGGCCTGCCAC	3083	False	109996380	NA	False	NA	NA	NA	109996373	109950693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_44250.nic	chr12	+	3714	15	NIC	ENSG00000076513.17	novel	1455	12	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_1	18.7388061824348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCAGTCTTTGAGTC	NA	False	NA	49	True	AATAAA	-28	NA	109999156	110039428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_109999320_110012004_110012138_110013124_110013250_110016387_110016434_110018344_110018489_110019138_110019329_110024045_110024113_110025741_110025824_110027704_110027767_110028511_110028643_110029477_110029636_110030644_110030759_110033796_110033958_110036260_110036329_110037358
transcript_44251.known	chr12	+	4241	15	FSM	ENSG00000076513.17	ENST00000261739.9	4241	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	10.0541899073907	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTCCTAGAAGTCCAGA	-3	True	NA	NA	False	NA	NA	NA	109999429	110039763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109999785_110012004_110012138_110013124_110013250_110016387_110016434_110018344_110018489_110019138_110019329_110024045_110024113_110025741_110025824_110027704_110027767_110028511_110028643_110029477_110029636_110030644_110030759_110033796_110033958_110036260_110036329_110037358
transcript_44259.known	chr12	-	496	3	FSM	ENSG00000174456.16	ENST00000551185.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGACCTTTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	110048565	110042280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110042460_110044419_110044534_110048362
transcript_44260.known	chr12	-	1755	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGCTGAATTCAACA	-3	True	NA	4	True	GATAAA	-24	NA	110048555	110027027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110028590_110048362
transcript_44263.known	chr12	-	724	2	FSM	ENSG00000174456.16	ENST00000615315.2	1443	2	1	718	1	87	multi-exon	FALSE	canonical	3	83	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGTTGCAAAGTGGTGT	-13	True	NA	NA	False	NA	NA	NA	110048521	110041894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110042460_110048362
transcript_44264.known	chr12	-	461	2	FSM	ENSG00000174456.16	ENST00000546627.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGAAGTTGGAACCAAA	-14	True	NA	NA	False	NA	NA	NA	110048522	110042311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110042613_110048362
transcript_44265.known	chr12	+	3124	19	FSM	ENSG00000122970.16	ENST00000242591.10	3124	19	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	32.4161311009743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTTGTGTCAAA	-6	True	NA	19	True	AATAAA	-34	NA	110124356	110218793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_44267.known	chr12	+	2710	19	FSM	ENSG00000122970.16	ENST00000552912.5	2710	19	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_1	31.2471727116092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTAAAAAATGTA	-28	True	NA	1	True	AATAAA	-16	NA	110124334	110218775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110124444_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_44272.known	chr12	+	3048	12	FSM	ENSG00000122970.16	ENST00000361948.8	3048	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	57.4552646675353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAATGAGCCTCCCTG	-28	True	NA	NA	False	AGTAAA	-16	NA	110124334	110169182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110167870
transcript_44282.known	chr12	+	4453	21	FSM	ENSG00000174437.18	ENST00000308664.10	4453	21	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_20	116.224556355359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	484	False	NA	NA	False	AATAAA	-14	NA	110281115	110351090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200_110346322_110350291
transcript_44285.known	chr12	+	8295	20	FSM	ENSG00000174437.18	ENST00000539276.7	8295	20	0	0	0	0	multi-exon	FALSE	canonical	2	328	junction_12	52.6521538731249	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGTGGTGGTGACT	-23	True	NA	NA	False	AATAAA	-17	NA	110281246	110351093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200
transcript_44292.known	chr12	-	3023	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	39.0466387797977	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTCTTTCAGTCTA	-12	True	NA	-2	True	AAAAAG	-3	NA	110403708	110372899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_44298.known	chr12	-	2200	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_6	37.2870082958438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACAGAAGTGGTTTCTT	-34	True	NA	NA	False	AATAAA	-20	NA	110403730	110375476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_44302.known	chr12	-	946	7	FSM	ENSG00000111229.16	ENST00000228825.12	946	7	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_6	127.388731404661	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAGTGTACAATTCA	-5	True	NA	53	True	GATAAA	-20	NA	110450337	110434822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110435218_110436109_110436205_110436556_110436684_110437083_110437153_110440311_110440389_110445451_110445552_110450254
transcript_44304.known	chr12	-	837	2	FSM	ENSG00000111229.16	ENST00000475777.2	837	2	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTATGTTAGACATGG	NA	False	NA	NA	False	NA	NA	NA	110450422	110444882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110445552_110450254
transcript_44306.known	chr12	-	1491	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	223.69841213526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTGCAGTGTCTAATT	-11	True	NA	-16	True	TATAAA	-42	NA	110468264	110452488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
transcript_44308.nic	chr12	+	1223	7	NIC	ENSG00000204856.12	novel	1101	7	NA	NA	-12	-288	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	78.5530606235895	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGATTTACTAAATA	7439	False	NA	NA	False	AAGAAA	-5	NA	110468402	110490061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486459_110486533_110486718_110487860_110487944_110490018
transcript_44309.nic	chr12	+	1547	7	NIC	ENSG00000204856.12	novel	1101	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	78.5530606235895	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	7439	False	NA	12	True	ATTAAA	-18	NA	110468402	110490385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486459_110486533_110486718_110487860_110487944_110490018
transcript_44310.nic	chr12	+	2690	6	NIC	ENSG00000204856.12	novel	1101	7	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_4	86.0083716855516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	7439	False	NA	12	True	ATTAAA	-18	NA	110468402	110490385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486459_110486533_110487944_110490018
transcript_44313.known	chr12	-	1457	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_4	43.0377148319841	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-4	True	NA	-13	True	TATAAA	-45	NA	110468257	110452485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
transcript_44314.known	chr12	+	1101	7	FSM	ENSG00000204856.12	ENST00000377673.10	1101	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	21.646144126739	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	-17	True	NA	12	True	ATTAAA	-18	NA	110468844	110490385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486455_110486533_110486718_110487860_110487944_110490018
transcript_44318.known	chr12	-	4994	6	FSM	ENSG00000196850.6	ENST00000354300.5	4994	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	7.88416133777081	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTTCTTTTGGTT	3	True	NA	0	True	AATAAA	-38	NA	110583318	110533244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110537096_110538143_110538274_110539821_110539946_110545879_110546079_110551788_110551969_110582808
transcript_44322.known	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	860.546919115977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-1	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
transcript_44323.known	chr12	-	818	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	881.41987724353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTTCTCTGTTAATA	-13	True	NA	33	True	AGTAAA	-7	NA	110502111	110491885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
transcript_44327.known	chr12	-	1531	4	FSM	ENSG00000111237.19	ENST00000549578.6	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1497	junction_3	162.485554913523	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAACAAA	-13	True	NA	NA	False	AAAACA	-4	NA	110502111	110491082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110502048
transcript_44330.known	chr12	+	2098	16	FSM	ENSG00000204852.17	ENST00000397656.8	2098	16	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_11	33.1092467782374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGTCCAGCTTTGTT	-28	True	NA	25	True	ATTAAA	-15	NA	110614105	110649125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628051_110628225_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_44331.known	chr12	+	1879	15	FSM	ENSG00000204852.17	ENST00000397655.7	1879	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	33.0448056988306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	-21	True	NA	28	True	ATTAAA	-18	NA	110614112	110649128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_44333.known	chr12	+	2222	15	FSM	ENSG00000204852.17	ENST00000397659.9	2222	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	29.9633279261193	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCTGTCGCAATAGTT	-5	True	NA	NA	False	NA	NA	NA	110614128	110649430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647195_110647337_110647748_110647894_110649042
transcript_44346.known	chr12	+	2149	4	FSM	ENSG00000204852.17	ENST00000550703.6	2149	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.2249721603218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTATTTTGTCTCTT	NA	False	NA	40	True	AATAGA	-27	NA	110614026	110630287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766
transcript_44347.known	chr12	+	1625	5	FSM	ENSG00000204852.17	ENST00000551555.3	1625	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	34.5135842821345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGTGAAACCCTGTCT	-4	True	NA	NA	False	NA	NA	NA	110614129	110633449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628796_110628919_110632471
transcript_44349.known	chr12	-	1472	8	FSM	ENSG00000186298.12	ENST00000340766.9	1472	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	614.469673451698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCTCAGTGTCTATT	NA	False	NA	-8	True	ATTAAA	-14	NA	110742939	110719907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110720205_110721104_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_44352.known	chr12	-	2552	7	FSM	ENSG00000186298.12	ENST00000335007.10	2552	7	0	0	0	0	multi-exon	FALSE	canonical	3	1690	junction_2	103.125597641366	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCCTCTACCATTTGG	1	True	NA	NA	False	AATAGA	-16	NA	110742891	110719679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_44358.known	chr12	-	1882	6	FSM	ENSG00000186298.12	ENST00000550991.5	1882	6	0	0	0	0	multi-exon	FALSE	canonical	3	1690	junction_1	108.43541856792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTAGGGGGGCTTTTAC	59	False	NA	NA	False	NA	NA	NA	110742873	110721300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_44359.known	chr12	-	582	3	FSM	ENSG00000186298.12	ENST00000620030.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	1797	junction_2	90.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTTCTATATCTAAGG	65	False	NA	NA	False	NA	NA	NA	110742867	110730524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110730760_110731769_110731902_110742652
transcript_44360.known	chr12	-	1581	5	FSM	ENSG00000186298.12	ENST00000551676.5	1581	5	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_2	100.760545353824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTAGTCTAACTTCCAC	93	False	NA	33	True	NA	NA	NA	110742839	110721769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_44361.known	chr12	+	1966	12	FSM	ENSG00000173093.13	ENST00000308208.10	1966	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	4.39007144278169	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGTGCCTGTCACACAC	0	True	NA	NA	False	AATAAA	-15	NA	110846986	110907535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110847106_110852858_110852964_110853404_110853575_110858585_110858776_110873841_110873962_110879905_110880088_110881114_110881297_110884029_110884251_110893075_110893151_110898932_110899126_110904587_110904792_110907330
transcript_44370.known	chr12	+	1044	3	FSM	ENSG00000185847.9	ENST00000654512.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGTGTAAGGAAGAAAA	-7	True	NA	NA	False	AATATA	-34	NA	110936573	110943763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110936699_110938289_110938513_110943067
transcript_44371.known	chr12	+	674	3	FSM	ENSG00000185847.9	ENST00000547607.2	1834	3	24	1136	5	-1132	multi-exon	FALSE	canonical	0	0	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCGTGTTCTCTCTCT	26	False	NA	NA	False	NA	NA	NA	110936606	110956832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110936699_110938289_110938513_110956473
transcript_44372.known	chr12	+	1416	3	FSM	ENSG00000185847.9	ENST00000553177.6	1416	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTTGACAATATGTTAA	-3	True	NA	NA	False	ACTAAA	-24	NA	110936577	110959093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110936699_110938289_110938513_110958021
transcript_44373.known	chr12	+	364	2	FSM	ENSG00000185847.9	ENST00000331096.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTAGATTTCAT	21	False	NA	NA	False	AATAAA	-21	NA	110936601	110937451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110936699_110937184
transcript_44376.known	chr12	-	3256	4	FSM	ENSG00000198324.14	ENST00000361483.4	3256	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.5358352374178	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATCCTTGATTGATTT	NA	False	NA	23	True	AGTAAA	-43	NA	111369121	111360650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111363464_111365563_111365652_111366112_111366258_111368911
transcript_44380.known	chr12	-	3114	3	FSM	ENSG00000198324.14	ENST00000683047.1	3114	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	10	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGATTGTGTCATTTTT	1	True	NA	-5	True	AGTAAA	-15	NA	111369095	111360678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111363464_111366112_111366258_111368911
transcript_44383.nnic	chr12	+	2760	8	NNC	ENSG00000111252.11	novel	648	2	NA	NA	-903	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	22.1709499211956	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGCTTTACAGTGATA	286	False	NA	1	True	AATAAA	-18	NA	111405019	111449202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_111405125_111418118_111418878_111446752_111446855_111446941_111447034_111447124_111447220_111447329_111447545_111447655_111447828_111447982
transcript_44384.nnic	chr12	+	5488	8	NNC	ENSG00000111252.11	novel	648	2	NA	NA	-1210	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	22.1709499211956	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGTCATAATATTTAA	NA	False	NA	12	True	ATTAAA	-19	NA	111404712	111451623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_111405125_111418118_111418878_111446752_111446855_111446941_111447034_111447124_111447220_111447329_111447545_111447655_111447828_111447982
transcript_44385.known	chr12	+	5431	8	FSM	ENSG00000111252.11	ENST00000341259.7	5431	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	10.8496214548843	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGTCATAATATTTAA	25	True	NA	12	True	ATTAAA	-19	NA	111405922	111451623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111406278_111418118_111418878_111446752_111446855_111446941_111447034_111447124_111447220_111447329_111447545_111447655_111447828_111447982
transcript_44388.nnic	chr12	+	2685	2	NNC	ENSG00000111252.11	novel	648	2	NA	NA	-1210	-24457	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTCCTTCACAGCTG	NA	False	NA	NA	False	NA	NA	NA	111404712	111420391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_111405125_111418118
transcript_44389.nic	chr12	+	2640	2	ISM	ENSG00000111252.11	ENST00000341259.7	5431	8	-12	31232	-12	-24457	5prime_fragment	TRUE	canonical	3	70	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTCCTTCACAGCTG	13	True	NA	NA	False	NA	NA	NA	111405910	111420391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_111406278_111418118
transcript_44390.known	chr12	-	1947	12	FSM	ENSG00000089234.16	ENST00000327551.6	1947	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	72.4009725517985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGCTCTTTCATTT	243	False	NA	-16	True	NA	NA	NA	111685720	111644081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636_111681836_111683145_111683308_111685587
transcript_44391.known	chr12	-	3996	12	FSM	ENSG00000089234.16	ENST00000419234.9	3996	12	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_7	17.2387225083243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCCGTGTGAAATGT	7	True	NA	-14	True	ATTAAA	-21	NA	111685956	111642145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636_111681836_111683145_111683308_111685710
transcript_44412.known	chr12	+	4006	21	FSM	ENSG00000111271.15	ENST00000313698.9	4006	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	14.8521883909409	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	-25	True	NA	14	True	AGTAAA	-15	NA	111686052	111757099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_44440.known	chr12	+	1760	14	FSM	ENSG00000111275.13	ENST00000548536.1	1760	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	161.682280300946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACCAAGAAAAATGAT	4	True	NA	NA	False	NA	NA	NA	111766947	111809630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111767097_111775604_111775721_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_44442.known	chr12	+	2888	13	FSM	ENSG00000111271.15	ENST00000549590.5	2888	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_11	14.7561192579741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGCGATTCTCCTGCCT	-7	True	NA	NA	False	NA	NA	NA	111686070	111745634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642
transcript_44445.known	chr12	+	9561	13	FSM	ENSG00000111275.13	ENST00000261733.7	9561	13	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	46.9209589510795	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGTGATATTCTTTA	-11	True	NA	NA	False	ATTAAA	-16	NA	111766932	111817532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111767097_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_44460.known	chr12	+	1572	12	FSM	ENSG00000111275.13	ENST00000416293.7	1572	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	132.317799256185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAATGATCCTTGCGT	345	False	NA	NA	False	NA	NA	NA	111766886	111809638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111767097_111781917_111782023_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_4447.known	chr1	+	2131	11	FSM	ENSG00000162551.14	ENST00000540617.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	280.595723417161	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGTCCCAGGAAGC	3	True	NA	NA	False	NA	NA	NA	21509427	21578175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_44496.known	chr12	+	11083	14	FSM	ENSG00000089022.14	ENST00000550735.7	11083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	163.585021232378	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCAGGTTCCACATGGT	1	True	NA	20	True	AATAAA	-21	NA	111842227	111902222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111870270_111870361_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889001_111890039_111890145_111892966
transcript_44499.known	chr12	+	1630	14	FSM	ENSG00000089022.14	ENST00000551404.6	1630	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	169.972326323953	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTAAAGCTGCTGTATA	399	False	NA	16	True	AATAAA	-20	NA	111842625	111893161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111870270_111870361_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
transcript_44526.nnic	chr12	+	2182	13	NIC	ENSG00000089022.14	novel	11083	14	NA	NA	-250	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	169.780802310901	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTAAAGCTGCTGTATA	NA	False	NA	16	True	AATAAA	-20	NA	111841977	111893161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889001_111890039_111890145_111892966
transcript_44528.nnic	chr12	+	2435	13	NIC	ENSG00000089022.14	novel	11083	14	NA	NA	-250	253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	169.780802310901	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGGATTCTGGTTTC	NA	False	NA	8	True	AGTAAA	-13	NA	111841977	111893414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889001_111890039_111890145_111892966
transcript_44529.nnic	chr12	+	2131	13	NIC	ENSG00000089022.14	novel	1630	14	NA	NA	-193	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	176.578987676589	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTAAAGCTGCTGTATA	-6	True	NA	16	True	AATAAA	-20	NA	111842034	111893161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
transcript_44531.nnic	chr12	+	2441	13	NIC	ENSG00000089022.14	novel	1630	14	NA	NA	-250	253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	176.578987676589	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGGATTCTGGTTTC	NA	False	NA	8	True	AGTAAA	-13	NA	111841977	111893414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
transcript_44582.known	chr12	+	974	9	FSM	ENSG00000089022.14	ENST00000549875.1	974	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	206.436885027846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGCTTCAGACTTTGT	507	False	NA	-85	True	NA	NA	NA	111842733	111893060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111842770_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
transcript_44583.known	chr12	-	543	4	FSM	ENSG00000234608.9	ENST00000590479.6	772	4	220	9	0	-4	multi-exon	FALSE	canonical	3	32	junction_3	61.3967063901278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTTTACTTACTTTGAG	251	False	NA	-18	True	AATAAA	-13	NA	111841710	111839776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840004_111840332_111840478_111841326_111841471_111841683
transcript_44584.known	chr12	-	1957	3	FSM	ENSG00000234608.9	ENST00000456429.6	1961	3	0	4	0	0	multi-exon	FALSE	canonical	3	78	junction_1	50.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	NA	False	NA	-9	True	AATAAA	-22	NA	111842902	111839767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840004_111840332_111840478_111841326
transcript_44585.known	chr12	-	662	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	5	-7	0	multi-exon	FALSE	canonical	3	22	junction_2	28	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	-3	True	NA	-9	True	AATAAA	-22	NA	111841964	111839767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840004_111840332_111840478_111841683
transcript_44587.known	chr12	-	2290	2	FSM	ENSG00000234608.9	ENST00000428207.4	2290	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTCTTTTGTTCTAG	NA	False	NA	-5	True	AATAAA	-26	NA	111842902	111839763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840478_111841326
transcript_44588.known	chr12	-	930	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	3	-5	1	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	59	False	NA	-8	True	AATAAA	-23	NA	111841902	111839766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840478_111841683
transcript_44589.nnic	chr12	-	888	2	FSM	ENSG00000234608.9	ENST00000692189.1	877	2	-26	15	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	NA	False	NA	-14	True	AATAAA	-17	NA	111841983	111839772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840004_111841326
transcript_44591.known	chr12	-	1716	13	FSM	ENSG00000198270.13	ENST00000547878.6	1716	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	17.6556569467755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTCATTTCAAAGCT	17	True	NA	-14	True	AATAAA	-17	NA	112013131	111931298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111965594_111965760_111978735_111978788_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_44595.known	chr12	-	1534	11	FSM	ENSG00000198270.13	ENST00000552374.7	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	9.61301201497221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-17	True	NA	-13	True	AATAAA	-18	NA	112013165	111931297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_44596.known	chr12	-	1446	10	FSM	ENSG00000198270.13	ENST00000550831.7	1446	10	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	7.38533749239283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	23	True	NA	3	True	AATAAA	-34	NA	112013125	111931281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_44597.known	chr12	-	1403	10	FSM	ENSG00000198270.13	ENST00000355445.7	1403	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	14.4179243724565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	9	True	NA	-13	True	AATAAA	-18	NA	112013139	111931297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_446.known	chr1	+	3468	14	FSM	ENSG00000187634.13	ENST00000618323.5	3468	14	0	0	0	0	multi-exon	TRUE	canonical	2	23	junction_6	65.6147984462951	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGTCTACTGCCTCCC	-2	True	NA	10	True	AATAAA	-13	NA	923922	944574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_924949_925921_926014_930154_930337_931038_931090_935771_935897_939039_939130_939271_939413_941143_941307_942135_942252_942409_942489_942558_943059_943252_943378_943697_943809_943907
transcript_44601.known	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	14.2038727113418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	13	True	NA	-85	True	NA	NA	NA	112013135	111931369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_44602.known	chr12	-	2761	1	FSM	ENSG00000198270.13	ENST00000437003.3	2761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTGTCCACGTACC	0	True	NA	-6	True	AATAAA	-21	NA	112013185	112010424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112010400_112013200
transcript_44603.known	chr12	+	1623	3	FSM	ENSG00000089248.7	ENST00000261735.4	1623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1769	junction_2	104	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTTTCTTCAGAC	-14	True	NA	NA	False	AATAAA	-44	NA	112013425	112023449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112013610_112019755_112019895_112022149
transcript_44605.known	chr12	+	1333	2	FSM	ENSG00000089248.7	ENST00000455836.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAATATATTGAACCAA	NA	False	NA	NA	False	NA	NA	NA	112013347	112023220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112013610_112022149
transcript_44607.nic	chr12	-	2778	23	NIC	ENSG00000111300.10	novel	2815	23	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_7	51.2725660861425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAGAAAC	NA	False	NA	NA	False	AAAAAG	-1	NA	112108806	112039261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112049482_112049612_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_44608.known	chr12	-	2815	23	FSM	ENSG00000111300.10	ENST00000551858.1	2815	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	53.4921211468884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAGAAA	9	True	NA	NA	False	ACTAAA	-6	NA	112108779	112039269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112097240_112097442_112108715
transcript_44612.nic	chr12	-	3277	22	ISM	ENSG00000111300.10	ENST00000261745.9	5771	24	-651	12573	-638	0	5prime_fragment	FALSE	canonical	3	137	junction_7	21.1423208855202	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAGAAAC	NA	False	NA	NA	False	AAAAAG	-1	NA	112109434	112039261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_4463.known	chr1	+	2241	10	FSM	ENSG00000162551.14	ENST00000539907.5	2241	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	392.490087945928	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCGAGGACAGAGCTGA	1	True	NA	24	True	AATAAA	-12	NA	21509425	21578399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21560625_21560746_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_44630.known	chr12	+	2633	12	FSM	ENSG00000135148.12	ENST00000412615.7	2633	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	23.7211765069955	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	10	True	NA	15	True	AATAAA	-19	NA	112125559	112153604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_44632.known	chr12	+	3178	12	FSM	ENSG00000135148.12	ENST00000257604.9	3178	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	83.1972663250839	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGTCTTGTGGTTCCT	-5	True	NA	14	True	AATAAA	-18	NA	112125544	112153603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112126150_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_44638.nic	chr12	+	3552	11	NIC	ENSG00000135148.12	novel	3178	12	NA	NA	-34	0	intron_retention	FALSE	canonical	3	255	junction_6	22.9192059199266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGTCTTGTGGTTCCT	-3	True	NA	14	True	AATAAA	-18	NA	112125503	112153603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_44643.nic	chr12	-	913	2	ISM	ENSG00000173064.14	ENST00000550724.2	587	5	-290	53328	49	-53328	5prime_fragment	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGCTGCCCTGGTGG	-5	True	NA	NA	False	AAAAAG	-5	NA	112382382	112319260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_112319743_112381951
transcript_44644.known	chr12	+	6073	16	FSM	ENSG00000179295.19	ENST00000351677.7	6073	16	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_6	68.2894493233683	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGTTTGCTTCATCAG	5	True	NA	4	True	AATAAA	-23	NA	112418946	112509918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
transcript_44653.nic	chr12	+	1059	7	ISM	ENSG00000179295.19	ENST00000392597.5	1876	11	-26	13906	-24	-13906	5prime_fragment	FALSE	canonical	3	634	junction_6	82.0887054079644	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATATAAAAACATCCTGC	8	False	NA	NA	False	AAGAAA	-14	NA	112418882	112473017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943
transcript_44655.known	chr12	-	1074	7	FSM	ENSG00000089009.16	ENST00000424576.6	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	1596	junction_6	3326.90291412298	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGACTACATTTTGTG	5	True	NA	-31	True	NA	NA	NA	112409596	112405202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409410
transcript_44656.known	chr12	-	921	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	0	0	0	multi-exon	FALSE	canonical	3	6502	junction_6	1562.22177967435	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCTTTTTTTAAT	-4	True	NA	-17	True	ATTAAA	-14	NA	112409605	112405188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_44661.nic	chr12	-	775	6	ISM	ENSG00000089009.16	ENST00000202773.14	921	7	-45	667	-15	438	5prime_fragment	FALSE	canonical	3	6502	junction_5	1683.41664480306	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGTTTCTACTTGTC	-49	True	NA	76	True	NA	NA	NA	112409650	112405855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_44664.nic	chr12	+	616	4	ISM	ENSG00000179295.19	ENST00000392597.5	1876	11	-26	33674	-24	-4237	5prime_fragment	FALSE	canonical	3	816	junction_2	26.5497436689865	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACATGGTAGTTTTCT	8	False	NA	NA	False	NA	NA	NA	112418882	112453249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194
transcript_44669.known	chr12	+	998	2	FSM	ENSG00000111331.14	ENST00000551007.1	998	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCCTCTGTGTCCTCATC	47	False	NA	NA	False	GATAAA	-3	NA	112938443	112942303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112938708_112941569
transcript_44671.nic	chr12	+	2148	6	ISM	ENSG00000135144.8	ENST00000547974.5	2175	8	3474	-31	-150	0	3prime_fragment	FALSE	canonical	3	18	junction_4	5.81721582889959	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTCTTTTCCTGCCAA	NA	False	NA	18	True	AATAAA	-18	NA	113093339	113098028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_113093701_113094037_113094100_113094788_113094948_113095041_113095204_113095324_113095415_113096714
transcript_44674.known	chr12	-	2502	21	FSM	ENSG00000111344.12	ENST00000548055.2	3368	21	257	609	0	1	multi-exon	TRUE	canonical	3	12	junction_1	3.84024738786449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTCTTCAGCGCATCC	750	False	NA	NA	False	NA	NA	NA	113135504	113099886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113100069_113100627_113100681_113101888_113102010_113103945_113104082_113104160_113104299_113105713_113105887_113107096_113107242_113108084_113108223_113112085_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_44679.nic	chr12	-	2649	18	ISM	ENSG00000111344.12	ENST00000418411.6	2472	20	433	705	-45	-705	internal_fragment	FALSE	canonical	3	12	junction_2	3.55188920928248	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATAGGACGCTGCTTGG	448	False	NA	-9	True	ATTAAA	-19	NA	113135806	113103744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113104082_113104160_113104299_113105713_113105887_113107096_113107242_113108084_113108223_113112085_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_44681.nic	chr12	-	2990	16	ISM	ENSG00000111344.12	ENST00000418411.6	2472	20	433	1858	-45	-1858	internal_fragment	FALSE	canonical	3	13	junction_3	3.18747549010185	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGTGCTTGGAATCGC	448	False	NA	-32	True	ATTAAA	-13	NA	113135806	113104897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113105887_113107096_113107242_113108084_113108223_113112085_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_44683.nic	chr12	-	2156	13	ISM	ENSG00000111344.12	ENST00000548972.5	2180	15	14	4362	2	4104	5prime_fragment	FALSE	canonical	3	15	junction_9	2.25308430576596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGCTAACACTCTA	-4	True	NA	NA	False	AATAAA	-27	NA	113135736	113111577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_44689.known	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	75.2200833675971	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-7	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_44697.known	chr12	-	4380	20	FSM	ENSG00000123064.13	ENST00000314045.11	4380	20	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	77.4222870129512	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAGGGTGAACTTA	-8	True	NA	-2	True	AATAAA	-25	NA	113185479	113157173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113159113_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_447.known	chr1	+	3465	14	FSM	ENSG00000187634.13	ENST00000616016.5	3465	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	64.6772597517403	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGTCTACTGCCTCCC	-2	True	NA	10	True	AATAAA	-13	NA	923922	944574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_924949_925921_926014_930154_930337_931038_931090_935771_935897_939039_939130_939274_939413_941143_941307_942135_942252_942409_942489_942558_943059_943252_943378_943697_943809_943907
transcript_44747.known	chr12	+	1858	4	FSM	ENSG00000139405.16	ENST00000548278.2	1858	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	17.6131264181639	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCACTTTTTTTCCC	2	True	NA	22	True	AATAGA	-18	NA	113185720	113192368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113186022_113186184_113186317_113186682_113187049_113191309
transcript_44752.known	chr12	+	1898	3	FSM	ENSG00000139405.16	ENST00000552495.1	1898	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	109.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCATGAATGTCACTTT	-3	True	NA	15	True	AATAGA	-11	NA	113185541	113192361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113186022_113186682_113187049_113191309
transcript_44760.known	chr12	+	5345	29	FSM	ENSG00000186815.13	ENST00000550785.5	5345	29	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	14.081939511593	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTGCCTCTTGAC	-16	True	NA	17	True	ACTAAA	-20	NA	113221459	113298585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113221627_113225243_113225337_113226727_113226965_113260367_113260493_113266179_113266357_113267842_113267957_113268741_113268873_113269756_113269846_113272657_113272693_113273231_113273291_113273568_113273669_113276918_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288235_113288757_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
transcript_44766.known	chr12	+	5248	28	FSM	ENSG00000186815.13	ENST00000335509.11	5248	28	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.6119047387676	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTGCCTCTTGAC	-12	True	NA	17	True	ACTAAA	-20	NA	113221463	113298585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113221627_113226727_113226965_113260367_113260493_113266179_113266357_113267842_113267957_113268741_113268873_113269756_113269846_113272657_113272693_113273231_113273291_113273568_113273669_113276918_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288235_113288757_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
transcript_44779.known	chr12	+	3293	27	FSM	ENSG00000186815.13	ENST00000552077.5	3293	27	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.3092484639275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGATGTACGGAACTGCG	10	True	NA	7	True	NA	NA	NA	113221485	113296129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113221627_113226727_113226965_113260367_113260493_113266179_113266357_113267842_113267957_113268741_113268873_113269756_113269846_113272657_113272693_113273231_113273291_113273568_113273669_113276918_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
transcript_44793.known	chr12	-	1872	3	FSM	ENSG00000166578.10	ENST00000546692.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGCTCATGCCTGT	16	True	NA	NA	False	AATAAA	-17	NA	113221027	113200044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113200814_113207437_113208510_113220996
transcript_44798.known	chr12	-	3510	16	FSM	ENSG00000089060.12	ENST00000680972.1	3510	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	19.5907007418202	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGAGAAAATGACACCC	14	True	NA	-16	True	AATAAA	-20	NA	113335109	113298770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334442
transcript_44799.known	chr12	-	2975	16	FSM	ENSG00000089060.12	ENST00000202831.7	2975	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	23.3232359104249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAAATGACACCCCCAA	3	True	NA	-12	True	AATAAA	-24	NA	113335120	113298766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334992
transcript_44800.nic	chr12	-	3539	16	NIC	ENSG00000089060.12	novel	3510	16	NA	NA	-31	0	intron_retention	FALSE	non_canonical	0	0	junction_11	22.7091758253501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTCAAGTGTAGAGAA	NA	False	NA	-26	True	AATAAA	-10	NA	113335174	113298780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332748_113332961_113334442
transcript_44805.nic	chr12	-	3397	15	NIC	ENSG00000089060.12	novel	3510	16	NA	NA	-31	0	intron_retention	FALSE	non_canonical	0	0	junction_10	24.2604911032615	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTCAAGTGTAGAGAA	NA	False	NA	-26	True	AATAAA	-10	NA	113335174	113298780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334442
transcript_44813.known	chr12	+	4787	12	FSM	ENSG00000151176.8	ENST00000280800.5	4787	12	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_10	12.5052055276695	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTTATCTTATTT	16	True	NA	17	True	AATAAA	-31	NA	113358586	113391629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113358891_113369115_113369210_113372648_113372808_113374473_113374575_113374792_113375008_113380744_113380843_113384104_113384266_113384850_113384947_113385211_113385284_113386936_113387090_113387743_113387907_113388458
transcript_44815.known	chr12	+	2321	11	FSM	ENSG00000151176.8	ENST00000545182.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	61.8349415783665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCATGTCAGGCAGAG	-5	True	NA	NA	False	NA	NA	NA	113358565	113389238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113358891_113369115_113369210_113372648_113372808_113374473_113374575_113374792_113375008_113380744_113380843_113384104_113384266_113385211_113385284_113386936_113387090_113387743_113387907_113388458
transcript_44817.nnic	chr12	-	3027	11	NIC	ENSG00000089060.12	novel	3510	16	NA	NA	-31	0	intron_retention	FALSE	canonical	1	1	junction_9	22.6944927240069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTCAAGTGTAGAGAA	NA	False	NA	-26	True	AATAAA	-10	NA	113335174	113298780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113332722_113332961_113334442
transcript_44825.known	chr12	+	1306	8	FSM	ENSG00000139410.15	ENST00000403593.9	1306	8	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_6	3.45820526768863	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	-13	True	NA	18	True	AATAAA	-16	NA	113422379	113438276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113422478_113427961_113428157_113428419_113428460_113429159_113429300_113434133_113434223_113435328_113435557_113436750_113436876_113437885
transcript_44828.known	chr12	-	2739	5	FSM	ENSG00000089116.4	ENST00000261731.4	2739	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4790199457749	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTGTGGTTTTCTTTT	-2	True	NA	NA	False	AATAAA	-21	NA	113471871	113462032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113463558_113467255_113467422_113468126_113468405_113469121_113469346_113471325
transcript_44832.known	chr12	-	3402	3	FSM	ENSG00000249550.8	ENST00000655514.1	3402	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCCACAAGATTCAGA	NA	False	NA	NA	False	AATAAA	-9	NA	113773726	113743439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113746596_113767074_113767209_113773614
transcript_44840.known	chr12	-	4422	25	FSM	ENSG00000122965.11	ENST00000545145.6	4422	25	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	63.3376643255987	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTTGCATAATAATAAT	24	False	NA	NA	False	AATAAA	-11	NA	113966306	113816741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113818187_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_44842.known	chr12	-	3574	25	FSM	ENSG00000122965.11	ENST00000392561.7	3574	25	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	60.9876894454028	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTCTTCATT	20	False	NA	-1	True	AGTAAA	-25	NA	113966310	113822053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113822647_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_44852.known	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_11	27.0585726084508	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	5	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_44871.nic	chr12	-	2467	18	ISM	ENSG00000122965.11	ENST00000261741.10	4148	24	-68	102644	-68	-9732	5prime_fragment	FALSE	canonical	3	308	junction_5	27.6920784895729	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTATTCCGCATGAAAT	NA	False	NA	NA	False	NA	NA	NA	113966393	113924700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_44874.nic	chr12	-	497	3	ISM	ENSG00000122965.11	ENST00000261741.10	4148	24	-68	138010	-68	-2204	5prime_fragment	FALSE	canonical	3	385	junction_1	25.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAAGTATGTAAAGGG	NA	False	NA	NA	False	NA	NA	NA	113966393	113960066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113960179_113962231_113962415_113966191
transcript_44875.known	chr12	-	4208	8	FSM	ENSG00000135111.16	ENST00000257566.7	4208	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	30.6640785657374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCTTGTGTTAAATG	2315	False	NA	-7	True	AATAAA	-17	NA	114683590	114670254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_114672303_114674164_114674836_114676312_114676471_114677579_114677657_114679504_114679652_114679912_114679973_114680878_114681147_114682811
transcript_44878.known	chr12	-	4733	7	FSM	ENSG00000135111.16	ENST00000349155.7	4733	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	17.1504778035158	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCTTGTGTTAAATG	-6	True	NA	-7	True	AATAAA	-17	NA	114684175	114670254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_114672303_114674164_114674836_114676312_114676471_114677579_114677657_114679504_114679652_114680878_114681147_114682811
transcript_44883.nic	chr12	-	1938	4	ISM	ENSG00000135111.16	ENST00000349155.7	4733	7	-94	7337	-94	0	5prime_fragment	FALSE	canonical	3	58	junction_2	21.7408984788271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAAAAAGGTGAGTTG	1636	False	NA	NA	False	NA	NA	NA	114684269	114677591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_114677657_114679504_114679652_114680878_114681147_114682811
transcript_44885.known	chr12	-	9885	31	FSM	ENSG00000123066.9	ENST00000281928.9	9885	31	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_23	9.21647076343941	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGGCTTTTTTCC	5	True	NA	-1	True	AATAAA	-17	NA	116277693	115958575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_115961399_115963406_115963520_115966081_115966244_115968939_115969098_115970593_115970771_115972077_115972237_115975170_115975314_115975514_115975739_115980749_115980939_115982383_115982604_115983116_115983541_115984179_115984373_115986265_115986490_115987108_115987289_115991019_115991958_115996475_115996682_115997009_115997231_116003002_116003103_116005868_116005994_116006305_116006412_116007410_116007637_116008400_116009133_116012796_116012902_116015108_116015275_116019223_116019413_116019777_116019973_116022455_116022602_116096668_116096753_116111427_116111513_116237467_116237706_116277059
transcript_44887.known	chr12	+	314	2	FSM	ENSG00000196668.4	ENST00000477702.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGTGATCTCTGC	2407	False	NA	7	True	AATAAA	-24	NA	116536063	116536518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116536212_116536352
transcript_44892.known	chr12	-	8426	5	FSM	ENSG00000111412.6	ENST00000261318.5	8426	5	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	33.4019086281009	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTCCTGTTAGATTGAT	-21	True	NA	NA	False	AATAAA	-36	NA	116738069	116710170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116717894_116719762_116719877_116720295_116720448_116723066_116723224_116737789
transcript_44896.known	chr12	-	1371	4	FSM	ENSG00000111412.6	ENST00000547630.1	1371	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	129.535923803227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTAGTCGAATGTG	-22	True	NA	NA	False	NA	NA	NA	116738070	116717069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116717894_116719762_116719877_116720295_116720448_116737789
transcript_44905.nnic	chr12	-	933	3	NIC	ENSG00000111412.6	novel	1371	4	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	146.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTCTGTGT	-2	True	NA	-87	True	NA	NA	NA	116738050	116717335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_116717894_116719762_116719877_116737789
transcript_44906.known	chr12	-	492	2	FSM	ENSG00000111412.6	ENST00000547606.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTTTCACTGTAAAATT	212	False	NA	NA	False	NA	NA	NA	116737836	116717448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116717894_116737789
transcript_44907.known	chr12	+	2211	12	FSM	ENSG00000135119.15	ENST00000392549.7	2211	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	9.8760918425582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGAGCCATGCCTGTTA	-6	True	NA	12	True	AATAAA	-23	NA	116738290	116852944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116833791_116833942_116835959_116836026_116836180_116836283_116849313_116849485_116852337
transcript_44912.nnic	chr12	+	1799	11	NNC	ENSG00000135119.15	novel	2415	11	NA	NA	0	-8324	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	9.16569691840179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGACAAAAGCTCTTTGA	-6	True	NA	NA	False	AATATA	-16	NA	116738290	116844617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116833791_116833942_116835959_116836026_116836180_116836283_116844251
transcript_44919.nic	chr12	+	1562	8	NIC	ENSG00000135119.15	novel	2415	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	10.6099683586441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGTATGAATTTGCT	-6	True	NA	9	True	AATAAA	-18	NA	116738290	116810520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116810073
transcript_44926.known	chr12	-	5789	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGACATTTGTGTTTT	-2	True	NA	-3	True	ATTAAA	-21	NA	116881441	116856143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116861467_116880975
transcript_44927.known	chr12	+	4861	11	FSM	ENSG00000174989.13	ENST00000652555.1	4861	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	26.4643155966671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGTCAAGTTATTTT	-28	True	NA	14	True	ATTAAA	-14	NA	116910949	117031148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116911356_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
transcript_44931.known	chr12	+	4648	11	FSM	ENSG00000174989.13	ENST00000455858.2	4648	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	21.9565479982624	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGTCAAGTTATTTT	-13	True	NA	14	True	ATTAAA	-14	NA	116910964	117031148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116911158_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
transcript_44941.nic	chr12	+	2743	3	ISM	ENSG00000174989.13	ENST00000455858.2	4648	11	-37	83377	-22	-37633	5prime_fragment	FALSE	canonical	3	77	junction_1	44.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGGCAGTGTTGGGGCA	NA	False	NA	NA	False	AAAAAG	-17	NA	116910927	116947771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_116911158_116928022_116928128_116945363
transcript_44943.known	chr12	-	1057	8	FSM	ENSG00000088992.18	ENST00000470612.5	1057	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_3	35.4711725438088	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	NA	False	NA	2	True	AATAAA	-26	NA	117099479	117038922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046771_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
transcript_44945.known	chr12	-	936	7	FSM	ENSG00000088992.18	ENST00000541210.5	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	42.7034346784112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCCTCTGTCAGTTC	-1	True	NA	0	True	AATAAA	-24	NA	117099446	117038924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046776_117046839_117049018_117049159_117075270_117075341_117099224
transcript_44947.nic	chr12	-	983	7	NIC	ENSG00000088992.18	novel	989	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.0352152289822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCCAATAAAAAAAAAAAAAA	NA	False	NA	-32	True	NA	NA	NA	117099492	117038956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_117039211_117046558_117046667_117046776_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
transcript_44950.nic	chr12	-	1654	4	ISM	ENSG00000088992.18	ENST00000470612.5	1057	8	8	8980	8	895	5prime_fragment	FALSE	canonical	3	98	junction_1	15.8605030044938	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGTGGTGCTGCGTGCC	NA	False	NA	-8	True	AATAAA	-13	NA	117099471	117047902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_117049159_117056805_117056887_117075270_117075341_117099224
transcript_44959.known	chr12	-	5976	12	FSM	ENSG00000135108.16	ENST00000622495.5	5976	12	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	61.7641475077198	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGCTCAAACACCATAG	5	True	NA	-16	True	AATAAA	-17	NA	117190470	117141990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_4496.known	chr1	+	703	5	FSM	ENSG00000162551.14	ENST00000468526.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	395.073648197396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACGTGAGTGCTCGGGGG	418	False	NA	NA	False	NA	NA	NA	21509396	21564211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040
transcript_44960.known	chr12	-	2906	12	FSM	ENSG00000135108.16	ENST00000330622.9	2906	12	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	110.461690752799	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTGAAGGGAAAAAAAG	19	True	NA	45	True	AATGAA	-20	NA	117190456	117145067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158085_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_44965.known	chr12	-	2554	11	FSM	ENSG00000135108.16	ENST00000550180.5	2554	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	163.709620975678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTCACACCTCTTGTT	245	False	NA	64	True	AAAAAG	-19	NA	117190286	117145048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_44975.known	chr12	-	4138	13	NNC	ENSG00000135108.16	novel	5976	12	NA	NA	-1	1268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	152.835128124685	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAAATGGCCTGCCCAAT	4	True	NA	-24	True	AATAAA	-22	NA	117190471	117143780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217_117190278_117190326
transcript_44987.nic	chr12	+	2211	12	NIC	ENSG00000111445.14	novel	2449	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	133.328897997855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-16	True	NA	14	True	AATAAA	-24	NA	118016721	118032234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_118016893_118017689_118017816_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_44989.known	chr12	+	2449	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	129.869864934795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-16	True	NA	14	True	AATAAA	-24	NA	118016721	118032234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_44995.known	chr12	+	2104	11	FSM	ENSG00000111445.14	ENST00000454402.7	2104	11	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_5	40.1254283466233	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-35	True	NA	14	True	AATAAA	-24	NA	118016702	118032234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_45.known	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00130_+_0_1100
transcript_45001.known	chr12	-	2855	9	FSM	ENSG00000176871.9	ENST00000315436.8	2855	9	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	46.6072352215834	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGTGGTGCTGGTGTG	5	True	NA	NA	False	AATAAA	-21	NA	118061179	118032686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118061035
transcript_45011.known	chr12	-	5009	9	FSM	ENSG00000176834.14	ENST00000359236.10	5009	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	10.1087833095779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTGATCTTGATT	9	True	NA	-21	True	AATAAA	-16	NA	118104011	118063592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118066695_118068376_118068598_118071051_118071068_118071358_118071470_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118103592
transcript_45032.known	chr12	-	694	4	FSM	ENSG00000176834.14	ENST00000539956.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGAGTCTCGCACTGT	2020	False	NA	NA	False	NA	NA	NA	118136026	118117666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118117883_118121500_118121619_118126480_118126671_118135856
transcript_45035.nnic	chr12	-	1534	3	NIC	ENSG00000176834.14	novel	694	4	NA	NA	-365	-28	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATAAAGTATTGCT	1655	False	NA	NA	False	AAAAAG	-8	NA	118136391	118117073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_118117883_118126480_118126671_118135856
transcript_45036.known	chr12	-	730	2	FSM	ENSG00000176834.14	ENST00000542195.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTGTGACAAGCTGG	647	False	NA	52	True	NA	NA	NA	118103990	118102838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118103171_118103592
transcript_45038.known	chr12	-	1865	2	FSM	ENSG00000176834.14	ENST00000612851.1	1865	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTACTCTGTAAATAATA	752	False	NA	-5	True	AATAAA	-18	NA	118103885	118101604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118103177_118103592
transcript_45039.known	chr12	+	1431	4	FSM	ENSG00000089220.5	ENST00000261313.3	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	5779	junction_2	216.953143942803	1339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTCCCCGGATGT	-2	True	NA	15	True	AATAAA	-19	NA	118136123	118145584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118136345_118138038_118138149_118139450_118139552_118144585
transcript_45048.known	chr12	-	4346	21	FSM	ENSG00000135090.14	ENST00000392533.8	4346	21	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	7.30941174103635	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTTGCTGTGTTATTGT	4	True	NA	-4	True	AATAAA	-14	NA	118372907	118149800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_45053.nic	chr12	-	2174	16	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	-29	27403	-29	4238	5prime_fragment	FALSE	canonical	3	45	junction_3	7.70165927288111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAAGGATACCAATGTT	-25	True	NA	NA	False	AATAAA	-2	NA	118372936	118177203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_45055.nic	chr12	-	1413	12	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	-29	51551	-29	70	5prime_fragment	FALSE	canonical	3	45	junction_5	7.8213524226318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCCAAGAGACACGG	-25	True	NA	NA	False	AATGAA	-6	NA	118372936	118201351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_45058.known	chr12	+	879	1	FSM	ENSG00000240342.3	ENST00000488803.1	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGTTTTTATACAAGAAA	24	False	NA	NA	False	NA	NA	NA	118246083	118246962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118246100_118247000
transcript_45060.known	chr12	+	4724	12	FSM	ENSG00000111707.12	ENST00000543473.2	4724	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	267.632411038007	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCATTTGGTGCATG	3	True	NA	6	True	AATAAA	-15	NA	118376554	118418033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125_118391283_118400658_118400755_118401758_118401821_118401982_118402005_118403411_118403518_118411072_118411158_118414334
transcript_45065.nic	chr12	+	709	6	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-177	26873	-177	-19987	5prime_fragment	FALSE	canonical	3	727	junction_4	94.2655822662757	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCAGCAGTGAAAGAAT	3161	False	NA	6	True	ATTAAA	-6	NA	118376377	118391160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125
transcript_45066.nic	chr12	+	659	6	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-44	26790	-44	-19904	5prime_fragment	FALSE	canonical	3	727	junction_4	94.2655822662757	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTGAAAATGAAAAGCTG	0	True	NA	89	True	AAGAAA	-10	NA	118376510	118391243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125
transcript_45069.nic	chr12	+	463	4	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-23	31885	-23	-24999	5prime_fragment	FALSE	canonical	3	856	junction_3	51.7322164827897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGATCAGCAGTACAAAGA	21	False	NA	24	True	AATGAA	-5	NA	118376531	118386148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113
transcript_45070.nic	chr12	+	428	3	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-23	33966	-23	-27080	5prime_fragment	FALSE	canonical	3	875	junction_2	49.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTGTGATTGAATCC	21	False	NA	NA	False	NA	NA	NA	118376531	118384067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011
transcript_45071.known	chr12	-	530	3	FSM	ENSG00000255618.2	ENST00000668907.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	NA	False	NA	0	True	AATAAA	-22	NA	118774578	118773030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118773303_118773610_118773776_118774485
transcript_45072.known	chr12	+	8431	13	FSM	ENSG00000139767.10	ENST00000267260.5	8431	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.68325082306035	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCTCAGTGTTCTCT	1	True	NA	17	True	ATTAAA	-24	NA	118981540	119163051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118982014_119102235_119102383_119114277_119114365_119116936_119117009_119120249_119120277_119122069_119122121_119125380_119125480_119130677_119130835_119145380_119145686_119151016_119151221_119153538_119153650_119154242_119154384_119156494
transcript_45076.known	chr12	+	1861	3	FSM	ENSG00000152137.8	ENST00000281938.7	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	6	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTGGTTCTTTTAA	1	True	NA	18	True	AATAAA	-17	NA	119178930	119194746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119179680_119187024_119187089_119193698
transcript_45077.known	chr12	+	886	3	FSM	ENSG00000183273.7	ENST00000536742.5	886	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGACTTTTCCATCC	4	True	NA	7	True	ATTAAA	-23	NA	119334711	119433636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119335267_119428682_119428763_119433385
transcript_45080.known	chr12	+	2303	8	FSM	ENSG00000111725.11	ENST00000541640.5	2303	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	92.2463427735866	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGGAGGAGCTCT	-12	True	NA	20	True	AATAAA	-21	NA	119667863	119681624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119668046_119668235_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_45081.nic	chr12	+	2577	8	NIC	ENSG00000111725.11	novel	2219	7	NA	NA	85	0	intron_retention	FALSE	canonical	3	14	junction_2	120.977818847346	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	-30	True	NA	15	True	AATAAA	-16	NA	119667948	119681619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_119668404_119671494_119671669_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_45084.known	chr12	+	2219	7	FSM	ENSG00000111725.11	ENST00000229328.10	2219	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	27.1149815087937	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	-6	True	NA	15	True	AATAAA	-16	NA	119668132	119681619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_45093.known	chr12	-	8736	48	FSM	ENSG00000122966.17	ENST00000392521.7	8736	48	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_18	18.8113505124755	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTTTAGTGCAATGA	0	True	NA	-4	True	AATAAA	-18	NA	119877320	119685790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_119688256_119690150_119690455_119697658_119697839_119697975_119698055_119700744_119700826_119701623_119701753_119701849_119701959_119704362_119704456_119708178_119708319_119710250_119710387_119710539_119710621_119712177_119712348_119712590_119712696_119713202_119713295_119713467_119713649_119714196_119714335_119718244_119718410_119718698_119718862_119720477_119720586_119721308_119721450_119728501_119728607_119730494_119730631_119734163_119734358_119735159_119735358_119742410_119742465_119752049_119752248_119757370_119757546_119758590_119758701_119760938_119761056_119767086_119767183_119770784_119770911_119772769_119772911_119775785_119775840_119776357_119776409_119776671_119776843_119782517_119782638_119783907_119784052_119784959_119785066_119803205_119803390_119822819_119822974_119825164_119825369_119832770_119832865_119834085_119834229_119850173_119850276_119857522_119857699_119869059_119869202_119876072_119876182_119877248
transcript_45101.nnic	chr12	+	3677	11	NNC	ENSG00000135127.12	novel	3832	10	NA	NA	-48	0	intron_retention	FALSE	canonical	0	0	junction_1	25.4118082788297	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCCTCAGTCTCTG	-34	True	NA	7	True	AATAAA	-16	NA	119989187	120094494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_119989596_119989798_119990298_119998520_119998737_120061709_120061827_120064732_120064880_120071621_120071802_120072510_120072730_120074442_120074587_120080886_120081018_120089950_120090072_120092999
transcript_45110.known	chr12	+	2094	1	FSM	ENSG00000277283.1	ENST00000611079.1	2094	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACTTTGCCTGCATGT	-12	True	NA	14	True	AATAAA	-26	NA	120116906	120119000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120116900_120119000
transcript_45111.known	chr12	-	2855	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	1.74355957741627	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCCAGGGTCTGTTT	2	True	NA	-9	True	AATAAA	-17	NA	120116753	120095098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
transcript_45112.known	chr12	-	8681	58	FSM	ENSG00000089154.11	ENST00000300648.7	8681	58	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_43	100.435343546495	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACCTGTTTTTGTA	1	True	NA	16	True	ATTAAA	-32	NA	120194715	120127201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591_120155720_120156460_120156605_120156911_120156993_120157848_120158031_120158459_120158616_120159824_120160024_120160141_120160256_120161489_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_45116.nic	chr12	-	2432	22	ISM	ENSG00000089154.11	ENST00000300648.7	8681	58	-23	34333	-23	-3075	5prime_fragment	FALSE	canonical	3	205	junction_7	34.5120176906446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATTCCTTCAAAGAGCA	6369	False	NA	-46	True	CATAAA	-29	NA	120194738	120161534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_45129.known	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	7495.46111636494	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-3	True	NA	-16	True	AATAAA	-19	NA	120201110	120196701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_45133.known	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	7355.81593859233	7177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-3	True	NA	-22	True	AATAAA	-13	NA	120201110	120196707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
transcript_45134.known	chr12	-	1257	8	FSM	ENSG00000089157.16	ENST00000228306.8	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_7	6898.106196779	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	NA	False	NA	-21	True	AATAAA	-14	NA	120201211	120196706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200892_120201082
transcript_45136.known	chr12	-	966	8	FSM	ENSG00000089157.16	ENST00000551258.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	3	1338	junction_3	7112.68046433657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCGGACGAGGATATG	10	False	NA	-128	True	NA	NA	NA	120201097	120196813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198771_120198894_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_45145.known	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_2	7657.29831961349	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	0	True	NA	-16	True	AATAAA	-19	NA	120201107	120196701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_45157.known	chr12	-	1344	7	FSM	ENSG00000089157.16	ENST00000551150.5	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	19833	junction_5	712.395411426984	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	8	False	NA	-13	True	AATAAA	-22	NA	120201099	120196698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729
transcript_45158.known	chr12	-	402	4	FSM	ENSG00000089157.16	ENST00000551914.1	402	4	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_1	9774.2659514098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAACACTGGTCTCGG	287	False	NA	NA	False	NA	NA	NA	120200820	120198946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120198994_120199117_120199206_120199309_120199486_120200729
transcript_4516.known	chr1	-	2489	25	FSM	ENSG00000076864.21	ENST00000495204.5	2489	25	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_24	14.3313952178038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCCCCTCCCTGGGCC	8	True	NA	NA	False	NA	NA	NA	21651836	21597007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21651778
transcript_4517.known	chr1	-	3322	25	FSM	ENSG00000076864.21	ENST00000374765.9	3322	25	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_24	16.7876856322987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGAGTTGGGCCTGGCTT	-14	True	NA	-5	True	AATAAA	-21	NA	21669357	21596220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21669253
transcript_45182.known	chr12	-	3785	12	FSM	ENSG00000089159.17	ENST00000228307.11	3785	12	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	230.274575594635	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	NA	False	NA	-14	True	AATAAA	-19	NA	120265771	120210446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_45188.nic	chr12	-	4444	12	NIC	ENSG00000089159.17	novel	5457	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	61	junction_10	242.225084860213	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGCTAGTGCTAT	NA	False	NA	-18	True	AATAAA	-15	NA	120265780	120210450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120226361_120227118_120265616
transcript_45193.nic	chr12	-	3950	12	NIC	ENSG00000089159.17	novel	5457	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	48	junction_5	244.814687886488	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGCTAGTGCTAT	NA	False	NA	-18	True	AATAAA	-15	NA	120265796	120210450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_45207.known	chr12	-	3683	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_5	88.5630284035048	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	NA	False	NA	-14	True	AATAAA	-19	NA	120265771	120210446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_45211.known	chr12	-	3835	11	FSM	ENSG00000089159.17	ENST00000267257.11	3835	11	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_5	207.157041878861	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTATTTCTTGGTGGTC	NA	False	NA	-6	True	AATAAA	-27	NA	120265771	120210438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_45230.known	chr12	-	1004	7	FSM	ENSG00000089159.17	ENST00000547983.5	1004	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	331.144312280244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCTGTCGGATTTCAAG	-5	True	NA	NA	False	NA	NA	NA	120265737	120221642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120224642_120224728_120265616
transcript_45234.known	chr12	+	1170	5	FSM	ENSG00000255857.7	ENST00000535200.2	1199	5	29	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_4	68.1432315054107	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGAGGCGGATC	18	True	NA	NA	False	NA	NA	NA	120201370	120213138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929_120211107_120212374
transcript_45240.known	chr12	+	707	4	FSM	ENSG00000255857.7	ENST00000542314.6	780	4	36	37	2	-37	multi-exon	FALSE	canonical	3	16	junction_3	68.762069647606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAAATAAAATCAAA	0	True	NA	-29	True	CATAAA	-42	NA	120201326	120210519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210085
transcript_45241.known	chr12	+	2525	4	FSM	ENSG00000255857.7	ENST00000667017.1	2525	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	61.2989033797143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTGAAAATACAAAAAA	3	True	NA	NA	False	NA	NA	NA	120201355	120213210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929
transcript_45244.known	chr12	+	1166	4	FSM	ENSG00000255857.7	ENST00000542265.7	1183	4	17	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	16.0069429380573	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCATGGGGGCGTG	206	False	NA	NA	False	AATACA	-7	NA	120201290	120213231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120212374
transcript_45253.known	chr12	+	1217	4	FSM	ENSG00000089163.4	ENST00000202967.4	1217	4	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGAATTTGTGTGT	8617	False	NA	21	True	AATAAA	-24	NA	120302320	120313249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120302379_120303560_120304059_120312455_120312751_120312883
transcript_45260.nnic	chr12	-	3010	15	NNC	ENSG00000135097.7	novel	2959	15	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_3	33.3503357997964	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTGAATGTCTT	975	False	NA	-12	True	AATAAA	-16	NA	120369248	120341329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_120343106_120345569_120345633_120346134_120346290_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
transcript_45261.known	chr12	-	2959	15	FSM	ENSG00000135097.7	ENST00000257552.7	2959	15	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	20.3069556797564	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTGAATGTCTT	5	True	NA	-12	True	AATAAA	-16	NA	120369164	120341329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120343106_120345569_120345633_120346134_120346323_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
transcript_4527.known	chr1	-	3318	23	FSM	ENSG00000076864.21	ENST00000374761.6	3318	23	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_22	10.654219666133	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGAGTTGGGCCTGGCTT	-25	True	NA	-5	True	AATAAA	-21	NA	21622568	21596220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21622338
transcript_45276.known	chr12	+	552	5	FSM	ENSG00000111780.8	ENST00000551806.1	552	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3766.87632528598	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGTATTTTTTTACTG	82	False	NA	-8	True	NA	NA	NA	120438197	120460006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120438230_120438378_120438522_120446656_120446830_120457075_120457180_120459906
transcript_45277.known	chr12	+	931	5	FSM	ENSG00000257218.6	ENST00000548171.1	931	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	117.77812827516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTTAGTTGCCAT	-8	True	NA	NA	False	NA	NA	NA	120446443	120460344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120446562_120446656_120446830_120454932_120455031_120457075_120457180_120459906
transcript_45291.known	chr12	+	4238	4	FSM	ENSG00000257218.6	ENST00000551765.6	4238	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	22.573337271116	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCATGAATGCATACTT	-8	True	NA	NA	False	AATAAA	-18	NA	120446443	120463749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120446562_120446656_120446830_120457075_120457180_120459906
transcript_45301.known	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3982	junction_2	243.798186120315	3018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-42	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
transcript_45302.nic	chr12	-	1056	4	NIC	ENSG00000111786.9	novel	1152	4	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_2	1992.03820802268	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	4974	False	NA	-5	True	AATATA	-18	NA	120469781	120461671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120462163_120463949_120464123_120465755_120465788_120469421
transcript_45306.known	chr12	+	537	3	FSM	ENSG00000111775.3	ENST00000229379.3	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_2	410	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTCATGAGCTGAGAG	-3	True	NA	27	True	AATAAA	-14	NA	120438112	120440730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120438230_120438378_120438522_120440453
transcript_45310.known	chr12	+	572	2	FSM	ENSG00000111775.3	ENST00000550009.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	8845	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTCTGAGACAGTTC	-2	True	NA	NA	False	NA	NA	NA	120438089	120438810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120438230_120438378
transcript_45311.known	chr12	-	1151	2	FSM	ENSG00000170855.4	ENST00000546954.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCCTCTGGAACTCA	9	True	NA	-16	True	AATAAA	-23	NA	120446384	120443963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120444956_120446225
transcript_45312.known	chr12	-	1153	2	FSM	ENSG00000170855.4	ENST00000302432.3	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTTGGAATAGCTGTG	1079	False	NA	NA	False	NA	NA	NA	120446370	120444207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120444956_120445965
transcript_45313.known	chr12	-	946	2	FSM	ENSG00000111786.9	ENST00000546942.1	946	2	0	0	0	0	multi-exon	FALSE	canonical	3	4447	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGATGAAATGCTAAACT	-12	True	NA	57	True	NA	NA	NA	120469718	120465138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120465788_120469421
transcript_45315.known	chr12	+	662	5	FSM	ENSG00000088986.11	ENST00000548342.5	662	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1348.1185036932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCATCCAAAAACAAGGA	26	True	NA	NA	False	NA	NA	NA	120469882	120498237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120470105_120488116_120488178_120488577_120488654_120496415_120496554_120498072
transcript_45318.known	chr12	+	814	3	FSM	ENSG00000088986.11	ENST00000392509.6	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	1533	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	-7	True	NA	13	True	AATAAA	-16	NA	120469849	120498493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120470105_120496415_120496554_120498072
transcript_45319.known	chr12	+	663	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	3122	junction_2	20.5	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	1	True	NA	13	True	AATAAA	-16	NA	120496112	120498493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120496217_120496415_120496554_120498072
transcript_45320.known	chr12	+	1376	2	FSM	ENSG00000088986.11	ENST00000550845.5	1376	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTTTTCTTGGAATTGGG	1	True	NA	NA	False	NA	NA	NA	120496112	120497673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120496217_120496401
transcript_45321.known	chr12	-	1214	2	FSM	ENSG00000248008.4	ENST00000668253.2	1218	2	0	4	0	-4	multi-exon	FALSE	canonical	3	59	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTCAGGTTCCTCAT	-39	True	NA	-3	True	ATTAAA	-18	NA	120495946	120491020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120492111_120495822
transcript_45326.nic	chr12	+	3227	18	NIC	ENSG00000022840.17	novel	3814	17	NA	NA	-14	0	intron_retention	FALSE	canonical	3	35	junction_1	324.304494024197	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTCCTGCCAAGGTT	NA	False	NA	20	True	AATAAA	-15	NA	120534341	120576886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120534969_120539367_120539469_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563346_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120571190_120571292_120575630_120575689_120575791_120575951_120576589
transcript_4533.nnic	chr1	-	1893	9	NNC	ENSG00000076864.21	novel	3334	23	NA	NA	12382	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.7727168473706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGAGTTGGGCCTGGCT	9817	False	NA	-6	True	AATAAA	-20	NA	21607659	21596221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21607539
transcript_45333.known	chr12	+	2671	17	FSM	ENSG00000022840.17	ENST00000413266.6	2671	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	235.197921972113	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTCCTGCCAAGGTT	-13	True	NA	20	True	AATAAA	-15	NA	120534811	120576886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120534969_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563331_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120571190_120571292_120575630_120575689_120575791_120575951_120576589
transcript_45346.nic	chr12	+	3043	16	NIC	ENSG00000022840.17	novel	3814	17	NA	NA	-32	0	intron_retention	FALSE	canonical	3	80	junction_13	246.569115845616	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTCCTGCCAAGGTT	NA	False	NA	20	True	AATAAA	-15	NA	120534323	120576886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120534969_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563346_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120575630_120575689_120575791_120575951_120576589
transcript_4537.known	chr1	-	4419	27	FSM	ENSG00000090686.16	ENST00000308271.14	4419	27	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_14	34.0286165684432	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTTCTCT	8	True	NA	NA	False	NA	NA	NA	21783149	21678297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_4538.known	chr1	-	3228	27	FSM	ENSG00000090686.16	ENST00000529637.5	3228	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.7485445543892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATGTTAGGGCATTAA	210	False	NA	NA	False	AAGAAA	-22	NA	21782991	21679366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706908_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729830_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_45384.known	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	TRUE	canonical	3	345	junction_3	17.4451521441727	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	1	True	NA	-4	True	AGTAAA	-17	NA	120529158	120503278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
transcript_45385.known	chr12	-	992	6	FSM	ENSG00000110871.15	ENST00000445328.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.468563179953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATTTGGTCTGTATCT	-2	True	NA	NA	False	NA	NA	NA	120529161	120503573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120522213_120522364_120528939
transcript_45388.known	chr12	-	794	5	FSM	ENSG00000167272.11	ENST00000543355.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	367.747450704964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTACCTAGCATTCCC	4	True	NA	-158	True	NA	NA	NA	120581381	120579153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120580995_120581258_120581342
transcript_45389.known	chr12	-	1086	5	FSM	ENSG00000167272.11	ENST00000357500.5	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	151.819588657064	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-17	True	NA	NA	False	NA	NA	NA	120581402	120578763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114_120581258_120581342
transcript_45393.known	chr12	-	913	4	FSM	ENSG00000167272.11	ENST00000341039.6	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	327.051813767924	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	6	True	NA	NA	False	NA	NA	NA	120581379	120578763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120581114_120581258_120581342
transcript_45395.known	chr12	-	718	2	FSM	ENSG00000167272.11	ENST00000539716.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTTAAATGCAGATAGA	-13	True	NA	NA	False	NA	NA	NA	120581398	120580595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120581258_120581342
transcript_45398.known	chr12	-	578	1	FSM	ENSG00000167272.11	ENST00000542568.1	578	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	1760	False	NA	-52	True	AATAAA	-18	NA	120579625	120579047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579000_120579600
transcript_45399.known	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_3	130.099961568019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	49	False	NA	-52	True	AATAAA	-18	NA	120581336	120579047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
transcript_45401.known	chr12	-	496	2	FSM	ENSG00000256008.3	ENST00000544339.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGAGACCACAATC	100	False	NA	NA	False	ATTAAA	-25	NA	120640153	120630104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120630497_120640049
transcript_45404.nic	chr12	+	2464	6	NIC	ENSG00000110917.8	novel	6341	5	NA	NA	-47	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	560.859697250569	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGTGTTGGGACTGAG	301	False	NA	45	True	AATAAA	-14	NA	120687101	120701857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315_120696542_120700463
transcript_45408.known	chr12	+	6341	5	FSM	ENSG00000110917.8	ENST00000228506.8	6341	5	0	0	0	0	multi-exon	FALSE	canonical	3	1371	junction_4	43.6369969177532	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTGGGACTGAGTT	-3	True	NA	47	True	AATAAA	-16	NA	120687148	120701859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315
transcript_4541.known	chr1	-	4309	26	FSM	ENSG00000090686.16	ENST00000400301.5	4309	26	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	57.9448013198768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTTCTCT	6	True	NA	NA	False	NA	NA	NA	21783195	21678297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_45420.known	chr12	+	841	3	FSM	ENSG00000110917.8	ENST00000412616.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCGAGTAGAGAGCAGCC	93	False	NA	32	True	ATTAAA	-17	NA	120687244	120696690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120687532_120694090_120694270_120696315
transcript_45423.known	chr12	+	4381	5	FSM	ENSG00000175970.11	ENST00000344651.5	4381	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	8.72854512504805	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCCCTCGTCCTGTCTC	5	True	NA	12	True	AATAAA	-19	NA	120710457	120723640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120710719_120713273_120713388_120716627_120716740_120716869_120717043_120719919
transcript_45427.known	chr12	+	1859	10	FSM	ENSG00000122971.9	ENST00000242592.9	1859	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	10.6458129484475	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	-14	True	NA	16	True	AATAAA	-16	NA	120725825	120740008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120725932_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_45430.nic	chr12	+	2087	9	NIC	ENSG00000122971.9	novel	1859	10	NA	NA	-8	0	intron_retention	TRUE	canonical	3	60	junction_4	10.5593560409714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	-22	True	NA	16	True	AATAAA	-16	NA	120725817	120740008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120725932_120727025_120727190_120736985_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_45435.known	chr12	-	4135	11	FSM	ENSG00000157837.16	ENST00000353487.7	4135	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	20.8300264042079	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTTGTCATTCTCACT	-7	True	NA	-1	True	ATTAAA	-21	NA	120904358	120762509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120765071_120766262_120766373_120767393_120767594_120768324_120768489_120768952_120769060_120782654_120782768_120783673_120783753_120784473_120784594_120791468_120791558_120810808_120810887_120903844
transcript_45439.known	chr12	+	3442	10	FSM	ENSG00000135100.19	ENST00000257555.11	3442	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.737027731190089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGCTTGTCCACAAAT	-5	True	NA	NA	False	AGTAAA	-24	NA	120978542	121002512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120979095_120988832_120989033_120993519_120993707_120994163_120994406_120996261_120996414_120996540_120996743_120997473_120997666_120999267_120999390_120999482_120999628_121001064
transcript_45440.known	chr12	+	2337	7	FSM	ENSG00000135100.19	ENST00000400024.6	2337	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.687184270936277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAATTTGGTGGATA	20	False	NA	NA	False	AAAAAG	-6	NA	120978567	120998300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120979095_120988832_120989033_120993519_120993707_120994163_120994406_120996261_120996414_120996540_120996743_120997473
transcript_45443.known	chr12	-	1339	7	FSM	ENSG00000157895.11	ENST00000546272.5	1339	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	61.7485942260137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGGAACCTTCCAG	3	True	NA	NA	False	NA	NA	NA	121016487	121003875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121012429_121012687_121016329
transcript_45444.known	chr12	-	4469	6	FSM	ENSG00000157895.11	ENST00000288757.7	4469	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	32.8548322168901	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACTGATGGCAATGGT	3	True	NA	-5	True	AATAAA	-27	NA	121016487	121000485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121004490_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_45446.known	chr12	-	1033	6	FSM	ENSG00000157895.11	ENST00000539736.5	1033	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	58.0723686446489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATGACCTCAGGAA	3	True	NA	NA	False	NA	NA	NA	121016487	121003891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121004493_121005002_121005061_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_45448.nic	chr12	-	1974	6	NIC	ENSG00000157895.11	novel	1339	7	NA	NA	-16	-593	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	26.0046149750386	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAGAAGCTCATGGCCA	NA	False	NA	NA	False	AAAAAG	-17	NA	121016518	121003014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_45452.known	chr12	+	1836	13	FSM	ENSG00000135124.16	ENST00000359949.11	1836	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	33.9913183360431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCGAGGACCAGACATTAA	317	False	NA	-20	True	NA	NA	NA	121210064	121234070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121216954_121217003_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_45454.known	chr12	+	1084	12	FSM	ENSG00000135124.16	ENST00000542067.5	1084	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.0144590766156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTACCCCACACCTGG	0	True	NA	NA	False	NA	NA	NA	121210164	121233547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121222963_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_45455.known	chr12	+	1760	12	FSM	ENSG00000135124.16	ENST00000337233.9	1760	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	10.1655714534504	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	9	True	NA	16	True	ATTAAA	-16	NA	121210128	121234106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_45462.known	chr12	+	1612	11	FSM	ENSG00000135124.16	ENST00000543984.5	1612	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	27.4191538892067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	9	True	NA	16	True	ATTAAA	-16	NA	121210128	121234106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_4547.nic	chr1	-	2183	14	ISM	ENSG00000090686.16	ENST00000400301.5	4309	26	-51	42738	-20	0	5prime_fragment	FALSE	canonical	3	165	junction_1	40.6852545872384	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACACTTTAAACCTATGT	NA	False	NA	NA	False	AATAAA	-2	NA	21783246	21721035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_45489.known	chr12	-	2051	17	FSM	ENSG00000110931.19	ENST00000402834.8	2051	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109.376928554426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGGGACAAAAAAAAAAA	17	True	NA	-3	True	NA	NA	NA	121296710	121240546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121244572_121244616_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_45491.known	chr12	-	2006	16	FSM	ENSG00000110931.19	ENST00000412367.6	2006	16	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	23.6825298948871	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	1119	False	NA	19	True	TTTAAA	-20	NA	121296686	121240524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_45492.known	chr12	-	5304	16	FSM	ENSG00000110931.19	ENST00000337174.7	5304	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	80.9879552087154	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	NA	False	NA	-22	True	AATAAA	-17	NA	121298057	121237696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
transcript_45521.nic	chr12	-	2018	15	NIC	ENSG00000110931.19	novel	2006	16	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	82.4999690785347	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	978	False	NA	19	True	TTTAAA	-20	NA	121296827	121240524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121240870_121245139_121245241_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_45522.known	chr12	-	5175	15	FSM	ENSG00000110931.19	ENST00000538733.5	5175	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	111.3718720214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	NA	False	NA	-22	True	AATAAA	-17	NA	121298057	121237696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121245139_121245241_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
transcript_4553.known	chr1	-	2818	11	FSM	ENSG00000090686.16	ENST00000421625.6	2818	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_9	27	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTACTTGTGGTTTGTCTT	NA	False	NA	-4	True	AATAAA	-14	NA	21783606	21727850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_45551.known	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_8	182.965918530611	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	3	True	NA	-24	True	AATAAA	-15	NA	121352388	121308356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_45554.known	chr12	-	2574	17	FSM	ENSG00000089053.13	ENST00000261819.8	2574	17	0	0	0	0	multi-exon	TRUE	canonical	3	654	junction_8	106.571700482586	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	3	True	NA	88	True	AATAAA	-19	NA	121352411	121308244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_4557.known	chr1	-	443	2	FSM	ENSG00000090686.16	ENST00000489108.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAAGCCTTTAAATAATA	258	False	NA	NA	False	TTTAAA	-19	NA	21782943	21757460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21757784_21782823
transcript_4559.nic	chr1	-	2827	22	NIC	ENSG00000142798.20	novel	865	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.6825893476986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	21937333	21877513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_21877540_21878185_21878254_21878432_21878492_21878576_21878664_21878993_21879122_21880106_21880255_21880362_21880560_21880655_21880836_21881338_21881503_21884527_21884675_21884766_21884919_21885012_21885158_21885319_21885452_21887214_21887335_21887419_21887675_21887937_21888067_21889980_21890142_21890426_21890486_21890584_21890695_21895921_21895967_21896174_21896311_21937154
transcript_4560.nic	chr1	-	2211	6	ISM	ENSG00000142798.20	ENST00000374695.8	14341	97	-23	66216	-23	-1225	5prime_fragment	FALSE	canonical	3	36	junction_5	8.65794432876535	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGGATGGAGAGG	NA	False	NA	NA	False	AATAAA	-19	NA	21937333	21888459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_21890142_21890426_21890486_21890584_21890695_21895921_21895967_21896174_21896311_21937154
transcript_45602.known	chr12	-	677	5	FSM	ENSG00000089053.13	ENST00000536416.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	503.76004952755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATTTGGCTTTTCTGAC	-3	True	NA	NA	False	AAAAAG	-22	NA	121352417	121345839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121345952_121346035_121346127_121346895_121347006_121347801_121347882_121352133
transcript_45603.known	chr12	-	2077	9	FSM	ENSG00000089053.13	ENST00000535482.1	2077	9	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_8	133.12535211221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTCTTATTTTGTTGC	NA	False	NA	-25	True	AATAAA	-14	NA	121331391	121308357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582
transcript_4562.known	chr1	-	3586	11	FSM	ENSG00000142798.20	ENST00000486901.1	3586	11	0	0	0	0	multi-exon	TRUE	canonical	3	234	junction_10	27.3607382941323	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCCTCCTGAGTCTTTG	6130	False	NA	-14	True	AATAAA	-17	NA	21830713	21822244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21823489_21823615_21823720_21824120_21824205_21824305_21824377_21824536_21824616_21824703_21824780_21827862_21827920_21828029_21828153_21828254_21828427_21828834_21829080_21829382
transcript_45622.nic	chr12	-	5094	23	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	-70	-83	intron_retention	FALSE	canonical	0	0	junction_18	76.9683443570008	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTGAACTTTGAGGG	3047	False	NA	-16	True	TATAAA	-18	NA	121579714	121429181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_45625.known	chr12	-	5315	23	FSM	ENSG00000089094.20	ENST00000377071.9	5315	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	87.6271213534612	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	-9	True	NA	-27	True	AGTAAA	-20	NA	121581023	121429095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580785
transcript_45632.nic	chr12	-	4497	23	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	-70	92	intron_retention	FALSE	canonical	0	0	junction_18	76.9683443570008	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATGCATACCAGTGTT	3047	False	NA	-10	True	TTTAAA	-17	NA	121579714	121429778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_45640.nnic	chr12	-	5082	22	NNC	ENSG00000089094.20	novel	5315	23	NA	NA	1014	-83	intron_retention	FALSE	canonical	0	0	junction_18	85.8843814912059	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTGAACTTTGAGGG	4131	False	NA	-16	True	TATAAA	-18	NA	121578630	121429181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578394
transcript_4566.known	chr1	+	2256	7	FSM	ENSG00000070831.17	ENST00000344548.7	2256	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	252.383086244348	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTGAGGGTTGTTAT	-7	True	NA	16	True	ATTAAA	-21	NA	22052667	22092946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22052743_22074093_22074220_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_45667.nic	chr12	-	3705	12	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	3160	0	intron_retention	FALSE	canonical	3	68	junction_11	75.4972496899311	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	-46	True	NA	-27	True	AGTAAA	-20	NA	121467393	121429095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
transcript_45668.nic	chr12	-	3619	12	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	3160	-83	intron_retention	FALSE	canonical	3	68	junction_11	75.4972496899311	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTGAACTTTGAGGG	-46	True	NA	-16	True	TATAAA	-18	NA	121467393	121429181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
transcript_45670.nic	chr12	-	3022	12	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	3160	92	intron_retention	FALSE	canonical	3	68	junction_11	75.4972496899311	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATGCATACCAGTGTT	-46	True	NA	-10	True	TTTAAA	-17	NA	121467393	121429778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
transcript_4568.known	chr1	+	10503	6	FSM	ENSG00000070831.17	ENST00000656825.1	10503	6	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	55.1601305292147	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGGTTTGTGTCTTTT	4	True	NA	NA	False	AATAAA	-15	NA	22052708	22101360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_45682.known	chr12	-	1549	11	FSM	ENSG00000089094.20	ENST00000446152.6	1549	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	86.6784863734941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGGGCAGGAGTGGC	11	True	NA	NA	False	NA	NA	NA	121579644	121509571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_45698.known	chr12	+	2051	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	190.189963516013	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTACATTGTCTTGG	-9	True	NA	15	True	AATAAA	-16	NA	121400118	121424348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_45704.known	chr12	+	2066	6	FSM	ENSG00000170633.17	ENST00000361234.10	1986	6	-77	-3	-42	-1	multi-exon	FALSE	canonical	3	413	junction_1	39.5959593898165	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATTGTCTTGGTCA	NA	False	NA	18	True	AATAAA	-19	NA	121400040	121424351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_4571.known	chr1	+	771	3	FSM	ENSG00000218510.9	ENST00000420503.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGATGCAAGATCCA	6	True	NA	NA	False	NA	NA	NA	22025510	22030800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22025640_22027413_22027535_22030279
transcript_45716.known	chr12	+	1449	5	FSM	ENSG00000170633.17	ENST00000613529.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	205.387438759044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACATTGTCTTGGTCAG	-1	True	NA	19	True	AATAAA	-20	NA	121400082	121424352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121417860_121417912_121420241_121420335_121420576_121420779_121423385
transcript_4572.known	chr1	+	1077	2	FSM	ENSG00000218510.9	ENST00000416769.2	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	6	True	NA	11	True	AATAAA	-1	NA	22025510	22031223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22025644_22030279
transcript_45727.known	chr12	+	1496	3	FSM	ENSG00000276045.3	ENST00000617316.2	1496	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	141.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCGTGTCTTGTATTTGT	13	True	NA	22	True	CATAAA	-22	NA	121626549	121642040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121626866_121626870_121627051_121641040
transcript_45729.known	chr12	+	2138	2	FSM	ENSG00000276045.3	ENST00000646827.1	2138	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	13	True	NA	NA	False	NA	NA	NA	121626549	121642677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121627051_121641040
transcript_4573.known	chr1	+	1388	2	FSM	ENSG00000218510.9	ENST00000634712.2	1388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGTGCTGTGGTGAT	-7	True	NA	7	True	ATTAAA	-14	NA	22025497	22031219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22025946_22030279
transcript_45731.known	chr12	-	879	6	FSM	ENSG00000139714.12	ENST00000542364.1	879	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.60768096208106	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGCCTGGGCCTATGGG	3	True	NA	NA	False	AATAAA	-15	NA	121672631	121651391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121651645_121652727_121652809_121654273_121654434_121659190_121659349_121669338_121669513_121672578
transcript_4574.known	chr1	+	1518	3	FSM	ENSG00000218510.9	ENST00000634934.2	1518	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	-12	True	NA	11	True	AATAAA	-1	NA	22025492	22031223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22025946_22027413_22027535_22030279
transcript_4575.known	chr1	+	8701	18	FSM	ENSG00000184677.18	ENST00000375647.5	8701	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	6.91870740172806	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACTATTCCCTGCATTC	-3	True	NA	10	True	AATAAA	-17	NA	22451850	22531154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22452005_22489879_22490646_22491399_22491534_22501491_22501685_22502298_22502442_22506048_22506242_22508000_22508138_22508529_22508732_22509099_22509234_22511178_22511348_22511675_22512135_22512923_22513131_22517299_22517465_22520060_22520276_22521495_22521659_22522376_22522464_22524217_22524445_22526201
transcript_45752.known	chr12	+	2766	13	FSM	ENSG00000188735.13	ENST00000342607.10	2766	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	29.4307095848311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATGGGAGGGGTGGGTG	-25	True	NA	NA	False	NA	NA	NA	121712751	121778956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608_121776445_121778076
transcript_45768.known	chr12	+	7510	12	FSM	ENSG00000188735.13	ENST00000449592.7	7510	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_10	15.6569631751425	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCTGACTGTGATTC	-25	True	NA	20	True	AGTAAA	-20	NA	121712751	121782068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_45787.nic	chr12	+	1604	10	NIC	ENSG00000188735.13	novel	7510	12	NA	NA	-36	96	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	31.1749345341715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGTCTGCCTCGTGCTCT	NA	False	NA	18	True	NA	NA	NA	121712715	121776254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_45788.nic	chr12	+	3139	10	NIC	ENSG00000188735.13	novel	7510	12	NA	NA	-36	0	intron_retention	FALSE	canonical	3	18	junction_6	31.1749345341715	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCCAGATGTGGCCC	NA	False	NA	18	True	AATAAA	-19	NA	121712715	121777789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_4579.known	chr1	+	5019	17	FSM	ENSG00000070886.12	ENST00000166244.8	5019	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	20.7483997876945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTCCCCCATTTTTTC	2	True	NA	8	True	AATAAA	-17	NA	22563488	22603595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22563730_22569288_22569354_22576216_22576881_22586479_22586636_22588870_22589207_22593325_22593451_22593523_22593687_22595229_22595324_22596105_22596174_22597311_22597477_22597675_22597862_22598150_22598213_22598837_22599048_22600660_22600811_22600897_22601089_22601299_22601474_22601626
transcript_45804.nic	chr12	+	2143	5	ISM	ENSG00000188735.13	ENST00000342607.10	2766	13	-36	25231	-36	-22433	5prime_fragment	FALSE	canonical	3	90	junction_3	13.9104277432436	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAAGAAAATGGTTTTG	NA	False	NA	NA	False	AAAAAG	-8	NA	121712715	121753725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127
transcript_45806.known	chr12	-	2435	5	FSM	ENSG00000139725.8	ENST00000267205.7	2435	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	23.1786539729985	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTCCTTTCTGCATT	-7	True	NA	-5	True	AATAAA	-21	NA	121793688	121777753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121779663_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_45810.known	chr12	-	1024	5	FSM	ENSG00000212694.8	ENST00000428029.6	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	4.41588043316392	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGCTCAGGGCCCGGC	9184	False	NA	NA	False	NA	NA	NA	121802933	121795639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630_121802785_121802878
transcript_45812.known	chr12	-	1485	4	FSM	ENSG00000139725.8	ENST00000537171.5	1485	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	7.58653778449403	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCCTTCACGGGCCA	9670	False	NA	NA	False	NA	NA	NA	121794262	121780486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121781007_121781082_121781193_121793151_121793240_121793495
transcript_45814.known	chr12	-	875	4	FSM	ENSG00000212694.8	ENST00000541694.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	4.92160768674447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTGTGCAAGCTTGT	0	True	NA	NA	False	NA	NA	NA	121802943	121795892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630
transcript_45818.known	chr12	-	1220	4	FSM	ENSG00000212694.8	ENST00000542933.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	16.9771087709958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	9207	False	NA	-3	True	AATAAA	-19	NA	121802910	121795266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802878
transcript_4582.known	chr1	+	1802	5	FSM	ENSG00000070886.12	ENST00000374644.8	1802	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	11.247221879202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCGGATGATCATTTTC	77	False	NA	NA	False	AATAAA	-19	NA	22563563	22589621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22563730_22569288_22569354_22576216_22576881_22586479_22586636_22588870
transcript_45820.nic	chr12	+	2328	6	ISM	ENSG00000139718.12	ENST00000604567.6	8557	17	-35	21657	-35	-19240	5prime_fragment	FALSE	canonical	1	4	junction_1	2.0976176963403	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGGGCTGTGATTGAG	589	False	NA	NA	False	AATAAA	-17	NA	121803973	121810999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_121804234_121804723_121804912_121805117_121805217_121805834_121806106_121808207_121808321_121809602
transcript_45821.known	chr12	-	1419	14	FSM	ENSG00000158104.11	ENST00000289004.8	1419	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.56136793309111	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTCTGTGTTTGTGT	-3	True	NA	NA	False	ATTAAA	-17	NA	121858859	121839526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121839839_121839931_121840049_121843709_121843833_121846861_121846934_121847051_121847215_121848998_121849077_121849686_121849791_121854702_121854793_121856323_121856407_121856582_121856626_121857327_121857433_121857756_121857820_121858686_121858714_121858820
transcript_45830.known	chr12	+	2725	6	FSM	ENSG00000110801.14	ENST00000541212.6	2725	6	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_4	24.4997959175174	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGAGTTCATACTTCTC	-20	True	NA	NA	False	NA	NA	NA	121888789	121918297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121915855_121915945_121916283
transcript_45831.known	chr12	+	1001	6	FSM	ENSG00000110801.14	ENST00000543699.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	226.909144813513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACTGGTGTGATTATT	35	True	NA	9	True	NA	NA	NA	121888844	121916584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121888995_121894738_121894842_121899633_121899890_121903005_121903108_121915855_121915945_121916283
transcript_45832.known	chr12	+	516	4	FSM	ENSG00000110801.14	ENST00000542602.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	253.680025929429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGGATCTGGAAGAGGC	-24	True	NA	NA	False	NA	NA	NA	121888785	121916399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121888995_121903005_121903108_121915855_121915945_121916283
transcript_45833.known	chr12	+	3729	22	FSM	ENSG00000158023.10	ENST00000288912.9	3729	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_17	8.16441035053249	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAAAGTTGGACATTCC	-8	True	NA	12	True	ATTAAA	-25	NA	121918591	122003919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121918696_121921285_121921684_121923621_121923991_121931745_121931887_121934246_121934357_121942533_121942646_121942894_121942976_121948983_121949062_121951479_121951531_121954119_121954335_121957073_121957269_121958271_121958523_121958942_121959095_121960584_121960759_121961977_121962163_121966954_121967070_121968005_121968170_121975243_121975335_121975541_121975686_121999715_121999945_122001496_122001599_122003651
transcript_45835.known	chr12	+	3722	6	FSM	ENSG00000110987.9	ENST00000261822.5	3722	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	10.0717426496113	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTGGTTTTGTCTCA	5	True	NA	20	True	AATAAA	-17	NA	122021883	122062044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885_122044054_122054804_122054927_122059091
transcript_45839.known	chr12	+	6247	6	FSM	ENSG00000110987.9	ENST00000538010.5	6247	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	31.9349338499393	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTGGTTTTGTCTCA	NA	False	NA	20	True	AATAAA	-17	NA	122019421	122062044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885_122044054_122054804_122054990_122059091
transcript_45848.known	chr12	+	871	4	FSM	ENSG00000110987.9	ENST00000432926.2	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCACACACCTGTGATCC	-3	True	NA	NA	False	NA	NA	NA	122021977	122044371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885
transcript_4585.known	chr1	+	3677	16	FSM	ENSG00000133216.17	ENST00000374632.7	3677	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	25.160286166894	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCAGCCTTCCTGAGG	132	False	NA	NA	False	GGGGCT	-39	NA	22710969	22914270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22711044_22781420_22781486_22784391_22785077_22863036_22863193_22864876_22865213_22882358_22882484_22892883_22893047_22895471_22895581_22896410_22896479_22905986_22906110_22906709_22906958_22907952_22908169_22909021_22909172_22910381_22910576_22912443_22912600_22913461
transcript_45850.known	chr12	+	850	3	FSM	ENSG00000256546.3	ENST00000653475.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACTCAAAATAGATCATA	-5	True	NA	15	True	ATTAAA	-27	NA	122064276	122068568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122064683_122068027_122068192_122068288
transcript_45859.known	chr12	-	4559	13	FSM	ENSG00000139719.11	ENST00000267199.9	4559	13	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	56.8565446247542	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGTCTTGCTATA	-16	True	NA	-34	True	AATAAA	-17	NA	122266494	122229563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_45868.nic	chr12	-	2221	11	NIC	ENSG00000139719.11	novel	2495	14	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	150.307551373842	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCATCCTCTAATCCC	2	True	NA	-17	True	AATAAA	-6	NA	122266476	122231562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_45878.known	chr12	-	1471	6	FSM	ENSG00000184047.20	ENST00000464942.7	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_4	88.8022522236908	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTATGCAGCCTCCTTCC	-18	True	NA	81	True	NA	NA	NA	122226052	122207667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_45879.known	chr12	-	1336	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	275.314075194132	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCCTCTTGTTCCTTC	-18	True	NA	-25	True	NA	NA	NA	122226052	122207773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
transcript_45893.known	chr12	-	2569	5	FSM	ENSG00000184047.20	ENST00000644509.1	2569	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	245.734104267194	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	1434	False	NA	-18	True	NA	NA	NA	122226062	122207766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644
transcript_45894.known	chr12	-	1338	5	FSM	ENSG00000184047.20	ENST00000353548.11	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	266.756911812984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTATGCAGCCTCCTTC	-18	True	NA	80	True	NA	NA	NA	122226052	122207668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224511_122224645_122225964
transcript_45896.known	chr12	-	1859	5	FSM	ENSG00000184047.20	ENST00000443649.9	1859	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	312.699036615081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCCTTCCTTGAG	928	False	NA	86	True	NA	NA	NA	122226568	122207662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122225964
transcript_45898.known	chr12	-	555	5	FSM	ENSG00000184047.20	ENST00000541273.6	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	301.96388442991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGAGGCCTACCTGCGT	-5	True	NA	NA	False	AAAACA	-32	NA	122226039	122208409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224644_122224749_122225964
transcript_45906.known	chr12	-	2641	5	FSM	ENSG00000184047.20	ENST00000645569.1	2641	5	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_4	92.0390542106991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAGGACTTAACACAGG	12	True	NA	27	True	NA	NA	NA	122226022	122207787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511
transcript_45922.nic	chr12	-	2132	9	ISM	ENSG00000130779.22	ENST00000537178.5	5229	24	-25	69134	12	-89	5prime_fragment	FALSE	canonical	3	86	junction_8	21.3186391451237	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAATCAACAAGACT	1024	False	NA	NA	False	AATAGA	-37	NA	122422657	122341176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
transcript_45931.known	chr12	-	4255	14	FSM	ENSG00000033030.15	ENST00000672018.1	4255	14	0	0	0	0	multi-exon	TRUE	non_canonical	3	70	junction_8	14.8539238336016	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATAGTGTTTTTAACC	NA	False	NA	-3	True	AATAAA	-19	NA	122501073	122471598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_45946.nic	chr12	-	1981	11	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_7	237.124945967311	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	11	False	NA	-40	True	AATAAA	-13	NA	122526983	122505058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_45947.known	chr12	-	1956	11	FSM	ENSG00000111011.18	ENST00000433877.6	1956	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	237.886527571445	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	18	True	NA	-40	True	AATAAA	-13	NA	122526936	122505058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_45950.known	chr12	-	2001	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	238.828725240495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-6	False	NA	-40	True	AATAAA	-13	NA	122527000	122505058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_45952.known	chr12	-	3461	10	FSM	ENSG00000111011.18	ENST00000331738.12	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_3	106.304593817326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCCAAGTGATCTTC	18	True	NA	NA	False	AATAAA	-18	NA	122526936	122503453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_45953.nic	chr12	-	2251	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	0	333	combination_of_known_junctions	FALSE	canonical	3	330	junction_3	112.648365815877	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCATGCTTTTTGC	-1	True	NA	NA	False	AATAAA	-15	NA	122526995	122504725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_45959.nic	chr12	-	1918	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_3	112.648365815877	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-1	True	NA	-40	True	AATAAA	-13	NA	122526995	122505058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_45963.known	chr12	-	1041	8	FSM	ENSG00000111011.18	ENST00000527399.3	1041	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	298.008354902739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	-1	True	NA	37	True	AAGAAA	-8	NA	122526995	122511110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122511189_122515104_122515228_122517230_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_45965.nic	chr12	-	933	7	ISM	ENSG00000111011.18	ENST00000331738.12	3461	10	-47	7657	4	0	5prime_fragment	FALSE	canonical	3	564	junction_4	50.9272356733932	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	11	False	NA	37	True	AAGAAA	-8	NA	122526983	122511110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_45978.known	chr12	-	1146	9	FSM	ENSG00000111011.18	ENST00000525335.6	1146	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	307.245601066964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGCTTTGGCAGGGC	5	True	NA	NA	False	AATGAA	-24	NA	122526949	122508249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122508448_122511108_122511189_122514711_122514729_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522330_122526847
transcript_45983.known	chr12	+	2719	8	FSM	ENSG00000139726.11	ENST00000280557.11	2719	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	516.092935785162	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	-14	True	NA	17	True	ATTAAA	-18	NA	122752823	122771064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033
transcript_45989.nic	chr12	+	473	6	ISM	ENSG00000139726.11	ENST00000455982.2	1052	8	-14	2555	-14	-2555	5prime_fragment	FALSE	canonical	0	0	junction_2	557.567072198493	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACCGTACCACAAAAGG	8410	False	NA	NA	False	AATAAA	-34	NA	122752809	122767515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487
transcript_45992.nic	chr12	+	417	5	ISM	ENSG00000139726.11	ENST00000455982.2	1052	8	-14	4711	-14	2103	5prime_fragment	FALSE	canonical	0	0	junction_2	595.561657177492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGGAGAAGAAAAAACA	8410	False	NA	20	True	NA	NA	NA	122752809	122765359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303
transcript_45996.known	chr12	+	4509	32	FSM	ENSG00000130787.14	ENST00000253083.9	4509	32	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	17.4586772417093	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCCAGAGGGAGGG	-13	True	NA	6	True	AATAAA	-25	NA	122835456	122862961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020_122857216_122858101_122858250_122858348_122858436_122858837_122858946_122859060_122859198_122859425_122859537_122859771_122859831_122860046_122860078_122860147_122860211_122860422_122860524_122860678_122860785_122860915_122861040_122861130_122861193_122861307_122861515_122861705
transcript_45999.nic	chr12	+	4640	31	NIC	ENSG00000130787.14	novel	4509	32	NA	NA	-61	0	intron_retention	FALSE	canonical	1	34	junction_1	17.5551511908423	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCCAGAGGGAGGG	650	False	NA	6	True	AATAAA	-25	NA	122835395	122862961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020_122857216_122858101_122858250_122858348_122858436_122858837_122858946_122859060_122859198_122859425_122859537_122859771_122859831_122860046_122860211_122860422_122860524_122860678_122860785_122860915_122861040_122861130_122861193_122861307_122861515_122861705
transcript_46.known	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00131_+_0_800
transcript_4600.known	chr1	+	3085	21	FSM	ENSG00000004487.18	ENST00000400181.9	3085	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1121.75106307059	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	-37	True	NA	16	True	AATAAA	-17	NA	23019467	23083689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23019948_23030468_23030635_23044426_23044487_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23066059_23066072_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_46015.known	chr12	+	2054	18	FSM	ENSG00000130787.14	ENST00000452196.6	2054	18	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	20.4658547603726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATAGCCTGTGTCATT	11	True	NA	NA	False	NA	NA	NA	122835480	122857384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020
transcript_46030.known	chr12	-	879	4	FSM	ENSG00000139722.7	ENST00000535765.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	114.874811086775	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCCACACCAGCCG	-23	True	NA	NA	False	NA	NA	NA	122896127	122867153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122867608_122868479_122868563_122870889_122871056_122895951
transcript_46031.nnic	chr12	-	2556	3	NIC	ENSG00000139722.7	novel	2706	4	NA	NA	-19	0	intron_retention	FALSE	canonical	3	13	junction_2	118.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTGTCACTTATTTAC	NA	False	NA	-2	True	AATAAA	-18	NA	122896146	122865329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122867608_122868479_122868563_122895951
transcript_46044.known	chr12	+	2308	8	FSM	ENSG00000111325.16	ENST00000397389.6	2308	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	64.1226503328916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTTGTGTTTGCGGCTG	8186	False	NA	14	True	TATAAA	-14	NA	122974579	122980042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976252_122976402_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_46046.known	chr12	+	1949	8	FSM	ENSG00000111325.16	ENST00000538755.5	1949	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	62.3891670345526	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	8309	False	NA	NA	False	NA	NA	NA	122974702	122979762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122977980_122978092_122978359_122978570_122978752_122979011_122979082
transcript_46049.known	chr12	+	1828	8	FSM	ENSG00000111325.16	ENST00000540324.5	1828	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	67.7652008702077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCCTTTGTGTTTGCGGC	24	True	NA	12	True	TATAAA	-12	NA	122975251	122980040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975384_122975810_122975868_122976600_122976768_122976870_122976964_122978324_122978360_122978441_122978570_122978752_122979011_122979082
transcript_46060.known	chr12	+	1465	7	FSM	ENSG00000111325.16	ENST00000545612.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	55.4166040099896	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	11	True	NA	19	True	AATAAA	-20	NA	122974751	122979438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
transcript_46062.known	chr12	+	1488	7	FSM	ENSG00000111325.16	ENST00000454694.6	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	45.0582955736233	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	230	False	NA	NA	False	NA	NA	NA	122974970	122979762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_46065.known	chr12	+	1696	7	FSM	ENSG00000111325.16	ENST00000538628.5	1696	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.1800621117697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	11	True	NA	19	True	AATAAA	-20	NA	122974751	122979438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122977167_122978324_122978570_122978752_122979011_122979082
transcript_46074.known	chr12	+	1780	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	28.9678941051794	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	-8	True	NA	13	True	TATAAA	-13	NA	122975219	122980041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_46085.known	chr12	+	996	6	FSM	ENSG00000111325.16	ENST00000542117.5	996	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	49.3582819798258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGAGTGTGTGACCC	37	False	NA	NA	False	NA	NA	NA	122974777	122979005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752
transcript_46092.known	chr12	+	2274	6	FSM	ENSG00000111325.16	ENST00000406539.6	2274	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	49.3534193344291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCGAGGGAGTCAGGG	1	True	NA	114	True	NA	NA	NA	122974741	122979533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_46107.known	chr12	+	1956	6	FSM	ENSG00000111325.16	ENST00000536150.5	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	53.443802259944	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTTGCGGCTGT	-14	True	NA	15	True	TATAAA	-15	NA	122974726	122980043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_46113.known	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	640.329727562293	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	-1	True	NA	-97	True	NA	NA	NA	122980262	122982795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46120.nic	chr12	+	1257	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	614.820494128164	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	41	False	NA	17	True	ATTAAA	-17	NA	122980413	122982909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980746_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46122.known	chr12	+	1591	6	FSM	ENSG00000182196.14	ENST00000543566.6	1591	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	422.956924520689	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTGTGGCTTTTTGT	4832	False	NA	21	True	ATTAAA	-21	NA	122980059	122982913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46125.known	chr12	+	1023	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	581.252096770412	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-19	True	NA	17	True	ATTAAA	-17	NA	122980680	122982909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46126.nic	chr12	+	1258	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_3	550.461043126578	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	14	True	NA	17	True	ATTAAA	-17	NA	122980277	122982909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980746_122981128_122981300_122981594_122981810_122982030_122982075_122982468_122982539_122982619
transcript_46127.known	chr12	+	1491	6	FSM	ENSG00000182196.14	ENST00000453766.7	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	444.630813147267	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4961	False	NA	17	True	ATTAAA	-17	NA	122980188	122982909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46139.known	chr12	+	818	6	FSM	ENSG00000182196.14	ENST00000412505.6	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_3	603.763728622381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGAAAGAGCAGCACTT	3	True	NA	-32	True	NA	NA	NA	122980702	122982860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980813_122981128_122981267_122981594_122981810_122982030_122982075_122982468_122982539_122982619
transcript_46140.nic	chr12	+	1055	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	327	junction_1	551.353026653523	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	151	False	NA	17	True	ATTAAA	-17	NA	122980658	122982909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980813_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46145.known	chr12	+	796	6	FSM	ENSG00000182196.14	ENST00000439686.6	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	565.514067022209	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCGGCCCAGCCTGGG	48	False	NA	NA	False	NA	NA	NA	122980747	122982706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980813_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46147.known	chr12	+	1318	6	FSM	ENSG00000182196.14	ENST00000454885.6	1318	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	757.258053770312	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-13	True	NA	17	True	ATTAAA	-17	NA	122980494	122982909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980888_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46174.known	chr12	+	1339	5	FSM	ENSG00000182196.14	ENST00000392435.7	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	438.149161245346	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCCAGCCTGGGCAGGT	4963	False	NA	NA	False	NA	NA	NA	122980190	122982711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468
transcript_46180.known	chr12	+	716	5	FSM	ENSG00000182196.14	ENST00000442210.2	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	625.733369735065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTTCCCCCGTGGAT	-4	True	NA	NA	False	NA	NA	NA	122980695	122982765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981300_122981655_122981810_122982030_122982075_122982468
transcript_46202.known	chr12	+	1677	4	FSM	ENSG00000182196.14	ENST00000540382.5	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	586.192801047573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAAAGGCCCCCTGG	33	False	NA	-9	True	NA	NA	NA	122980732	122982883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980813_122981128_122981880_122981956_122982539_122982619
transcript_46212.known	chr12	-	3484	12	FSM	ENSG00000150967.19	ENST00000280560.13	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	4.14010819517662	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGACTTCTACTTGGGC	-4	True	NA	1	True	AATAAA	-23	NA	122966463	122928991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122930172_122932191_122932329_122935271_122935432_122940110_122940285_122940806_122940996_122944390_122944520_122946024_122946223_122948623_122948830_122949787_122949919_122950450_122950566_122959634_122960323_122966286
transcript_46213.known	chr12	-	3330	11	FSM	ENSG00000150967.19	ENST00000540285.5	3330	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	6.43117407632541	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGACTTCTACTTGG	8640	False	NA	-1	True	AATAAA	-21	NA	122966500	122928993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122930172_122932191_122932329_122935271_122935432_122940110_122940285_122944390_122944520_122946024_122946223_122948623_122948830_122949787_122949919_122950450_122950566_122959634_122960323_122966286
transcript_46214.known	chr12	+	1273	5	FSM	ENSG00000182196.14	ENST00000536502.5	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	407.622987575529	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTCTCAGCTATTAAA	21	True	NA	-19	True	NA	NA	NA	122980720	122982873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_46215.known	chr12	-	6369	24	FSM	ENSG00000051825.15	ENST00000606320.6	6369	24	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_15	14.4842003745976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAGCAAATCTGCCACC	-17	True	NA	NA	False	AAAAAG	-17	NA	123233141	123154214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
transcript_46230.known	chr12	-	1144	4	FSM	ENSG00000111328.7	ENST00000618072.4	1144	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	1194.35347457201	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTTTTATTTTTTT	-2	True	NA	-1	True	ATTAAA	-22	NA	123268254	123260970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123268168
transcript_46231.known	chr12	-	1161	4	FSM	ENSG00000111328.7	ENST00000538446.5	1161	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	1192.4683084538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	3000	False	NA	-33	True	AATAAA	-19	NA	123269239	123261002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123269104
transcript_46232.nnic	chr12	-	1129	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	862	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	1180.6860529182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	5	True	NA	-33	True	AATAAA	-19	NA	123270279	123261002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123270176
transcript_46233.known	chr12	-	1281	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	1140.62682572152	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	1098	False	NA	-33	True	AATAAA	-19	NA	123271141	123261002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
transcript_46234.known	chr12	-	931	4	FSM	ENSG00000111328.7	ENST00000544658.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	1178.80089733405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTAACTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	123272334	123261275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123272156
transcript_46236.known	chr12	+	1554	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	18.5	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGTCAAACATTAAT	-25	True	NA	37	True	AATAAA	-45	NA	123233435	123257960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123233532_123253646_123253957_123256812
transcript_46240.known	chr12	-	513	2	FSM	ENSG00000051825.15	ENST00000369865.3	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCTAACATGGTGA	23	True	NA	NA	False	NA	NA	NA	123233101	123230036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123230523_123233074
transcript_46243.nic	chr12	-	2899	18	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-379	31701	-375	-31701	5prime_fragment	FALSE	canonical	3	30	junction_15	8.87124353953358	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGATCCAGATTCTATT	-11	True	NA	NA	False	AAAAAG	-8	NA	123365222	123320809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_46248.nic	chr12	-	2481	17	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-18	32426	-14	-32426	5prime_fragment	FALSE	canonical	3	30	junction_14	8.24407931487804	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCAGTATATTAAAT	350	False	NA	NA	False	NA	NA	NA	123364861	123321534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_46252.nic	chr12	-	2633	16	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-379	34582	-375	-34582	5prime_fragment	FALSE	canonical	3	30	junction_13	8.37827879433214	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGGAAAGGTGAGCACT	-11	True	NA	NA	False	AATAAA	-6	NA	123365222	123323690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_46255.known	chr12	+	1920	1	FSM	ENSG00000256092.3	ENST00000602918.1	1920	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTTGTAAAGTCATT	7583	False	NA	8	True	AATAAA	-18	NA	123363867	123365787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123363900_123365800
transcript_46256.known	chr12	+	2776	8	FSM	ENSG00000183955.14	ENST00000402868.8	2776	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	44.6117034155013	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACGTGTGTGTCTTTCT	-21	True	NA	3	True	ATTAAA	-19	NA	123384131	123409353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123384209_123389432_123389555_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_46258.known	chr12	+	1774	7	FSM	ENSG00000183955.14	ENST00000437519.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	50.4691875196034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACAGAAAACAACT	13	True	NA	NA	False	AATAAA	-24	NA	123384165	123408507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123384209_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_4626.known	chr1	+	3033	19	FSM	ENSG00000004487.18	ENST00000356634.7	3033	19	0	0	0	0	multi-exon	FALSE	canonical	3	2225	junction_2	352.958260918508	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	5	True	NA	16	True	AATAAA	-17	NA	23019447	23083689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_46260.known	chr12	-	1752	4	FSM	ENSG00000150977.11	ENST00000280571.10	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.24721912892465	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCGCCTGCTCTGTG	-6	True	NA	NA	False	AGTAAA	-19	NA	123436684	123415038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123415922_123423043_123423158_123430507_123430660_123436081
transcript_46261.nnic	chr12	-	1282	3	NIC	ENSG00000150977.11	novel	1752	4	NA	NA	-32	-350	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	26	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTATCTAGAGTGGT	1	True	NA	-8	True	ATTAAA	-23	NA	123436716	123415388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_123415922_123423043_123423158_123436081
transcript_46263.known	chr12	-	3933	7	FSM	ENSG00000188026.13	ENST00000376874.9	3933	7	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_2	14.135259302735	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTACATGTGTGTA	-1	True	NA	-8	True	AATAAA	-20	NA	123533719	123470053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123472683_123484179_123484273_123485632_123485806_123498543_123498766_123499417_123499537_123523494_123523646_123533173
transcript_46264.known	chr12	+	1477	2	FSM	ENSG00000184209.15	ENST00000526639.3	1477	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCATTTGTAAGGAGC	-12	True	NA	NA	False	NA	NA	NA	123458138	123466936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123458217_123465537
transcript_46265.known	chr12	+	2544	4	FSM	ENSG00000086598.11	ENST00000262225.8	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	3706	junction_2	261.929167694033	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGTAATGTCTCGAT	10	True	NA	10	True	AATAAA	-20	NA	123584551	123598582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123584817_123586746_123586940_123590341_123590450_123596604
transcript_46267.known	chr12	+	2656	14	FSM	ENSG00000111364.16	ENST00000238146.9	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_11	28.348423873201	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	-21	True	NA	27	True	AATAAA	-21	NA	123602098	123620943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431_123619725_123619963
transcript_46278.nic	chr12	+	1602	13	ISM	ENSG00000111364.16	ENST00000238146.9	2656	14	-26	1319	-4	-4	5prime_fragment	FALSE	canonical	3	224	junction_11	28.9160662761879	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGGGAGAAGAAAATTCA	4209	False	NA	NA	False	AAAACA	-6	NA	123602072	123619624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431
transcript_46279.nic	chr12	+	1676	13	ISM	ENSG00000111364.16	ENST00000238146.9	2656	14	-26	1245	-4	-18	5prime_fragment	FALSE	canonical	3	224	junction_11	28.9160662761879	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATGAGAAAAGGAAAAGG	4209	False	NA	NA	False	AATAAA	-44	NA	123602072	123619698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431
transcript_46291.known	chr12	+	3327	13	FSM	ENSG00000111358.14	ENST00000543341.7	3327	13	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_2	9.64473085852235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGAATTATTTCC	-4	True	NA	14	True	AATAAA	-16	NA	123633828	123662604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_46306.known	chr12	+	1472	12	FSM	ENSG00000111358.14	ENST00000228955.11	1472	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	27.1938252592644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATGAGTAAGGAGAA	-4	True	NA	115	True	NA	NA	NA	123633828	123660829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123633873_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_46324.known	chr12	-	2397	9	FSM	ENSG00000111361.13	ENST00000424014.7	2397	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	234.737619481838	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGATCCTCCTGCCT	-19	True	NA	NA	False	NA	NA	NA	123633686	123620405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_46332.known	chr12	-	1768	5	FSM	ENSG00000111361.13	ENST00000537073.1	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	27.4454003432269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGTTTCACCAT	NA	False	NA	NA	False	NA	NA	NA	123633766	123625966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_46333.known	chr12	+	2908	18	FSM	ENSG00000168778.13	ENST00000303372.7	2908	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	7.23601144220319	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAAGTGCCCTGTG	-11	True	NA	36	True	AATAAA	-26	NA	123671112	123708399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673614_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_46334.known	chr12	+	2513	18	FSM	ENSG00000168778.13	ENST00000426174.6	2513	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	8.36329101958079	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-11	True	NA	NA	False	NA	NA	NA	123671112	123708007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673617_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_46338.known	chr12	+	6507	20	FSM	ENSG00000185344.15	ENST00000330342.8	6507	20	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_14	32.0957708141606	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTGTTTTGCTTTATT	-19	True	NA	5	True	AATAAA	-19	NA	123712352	123761755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058_123737272_123743784_123743936_123744200_123744338_123744596_123744785_123744881_123744973_123747606_123747726_123748574_123748786_123751109_123751230_123752282_123752403_123754419_123754538_123756814_123756987_123757926
transcript_46341.nnic	chr12	+	2922	19	NIC	ENSG00000185344.15	novel	6507	20	NA	NA	-17	53	combination_of_known_splicesites	FALSE	canonical	3	48	junction_15	69.1580762179866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATGTTAAAGTTATTTT	-36	True	NA	31	True	AATATA	-14	NA	123712335	123758273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058_123737272_123743784_123743936_123744200_123744338_123744596_123744785_123744881_123744973_123747606_123747726_123748574_123748786_123752282_123752403_123754419_123754538_123756814_123756987_123757926
transcript_46347.known	chr12	+	3228	18	FSM	ENSG00000185344.15	ENST00000540368.6	3228	18	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_14	33.5563359391472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAATTGATTGAACTTA	23	False	NA	NA	False	NA	NA	NA	123712534	123755441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058_123737272_123743784_123743936_123744200_123744338_123744596_123744785_123744881_123744973_123747606_123747726_123748574_123748786_123751109_123751230_123752282_123752403_123754419
transcript_46352.known	chr12	+	1621	9	FSM	ENSG00000185344.15	ENST00000613625.5	1621	9	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	29.6637404923924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATGGTGTAAAAGTGAAA	-16	True	NA	-35	True	TTTAAA	-23	NA	123712355	123737644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058
transcript_46357.known	chr12	+	4321	5	FSM	ENSG00000179195.16	ENST00000538932.6	4321	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	11.1214882097676	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTTGTGTGAATTCA	-26	True	NA	29	True	AATAAA	-30	NA	123973214	124015439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973353_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_46358.known	chr12	+	4262	5	FSM	ENSG00000179195.16	ENST00000392404.7	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	6.65206734782504	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	-29	True	NA	16	True	AATAAA	-17	NA	123973211	124015426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973304_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_46360.known	chr12	-	2790	5	FSM	ENSG00000119242.9	ENST00000238156.8	2790	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	26.7581763205193	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTAAGTGGCTGATTT	1	True	NA	-3	True	ATTAAA	-33	NA	123972831	123935625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123937831_123942743_123942786_123943346_123943494_123944271_123944365_123972528
transcript_46363.known	chr12	+	455	4	FSM	ENSG00000179195.16	ENST00000543017.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.7194104181711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTACTCTACAAGAGGAA	32	True	NA	NA	False	NA	NA	NA	123973272	124011773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973304_123973885_123974021_124011380_124011442_124011545
transcript_46364.known	chr12	-	1790	4	FSM	ENSG00000119242.9	ENST00000545891.5	1790	4	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_3	47.7237420531496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAAACTTTATTTTCTA	0	True	NA	35	True	NA	NA	NA	123972734	123936435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123937831_123942743_123942786_123943346_123943494_123972528
transcript_46366.known	chr12	+	802	2	FSM	ENSG00000179195.16	ENST00000542820.5	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	-22	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973353_123973885
transcript_46367.known	chr12	+	753	2	FSM	ENSG00000179195.16	ENST00000540009.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	-22	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973304_123973885
transcript_46371.known	chr12	-	3070	13	FSM	ENSG00000073060.17	ENST00000680982.1	3070	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	132.982454983104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGGAGCCATCTAAAAG	-3	True	NA	NA	False	CATAAA	-30	NA	124863896	124777211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124862379_124862498_124863594
transcript_46372.known	chr12	-	3405	13	FSM	ENSG00000073060.17	ENST00000261693.11	3405	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	116.621419797375	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTATTTCTTG	-1	True	NA	NA	False	CATAAA	-19	NA	124863864	124776855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124782682_124782812_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_46373.known	chr12	-	1597	13	FSM	ENSG00000073060.17	ENST00000546215.5	1597	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	126.885857499303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGACAGCCCCCCAGC	5111	False	NA	NA	False	NA	NA	NA	124863783	124778498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124782682_124782812_124786440_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_46374.known	chr12	-	2731	12	FSM	ENSG00000073060.17	ENST00000415380.6	2731	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	107.47031110309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCCTGCCTCTGTGA	0	True	NA	-5	True	AATAAA	-13	NA	124863846	124777632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786106_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_46375.known	chr12	-	2897	12	FSM	ENSG00000073060.17	ENST00000680596.1	2897	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	109.013229919678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGGAGCCATCTAAAAG	-2	True	NA	NA	False	CATAAA	-30	NA	124863865	124777211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810266_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_46376.known	chr12	-	3329	12	FSM	ENSG00000073060.17	ENST00000339570.9	3329	12	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	34.9391442604551	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTATTTCTTG	-3	True	NA	NA	False	CATAAA	-19	NA	124863917	124776855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_46379.nnic	chr12	-	2493	12	NIC	ENSG00000073060.17	novel	2731	12	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	105.241084897549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCCTGCCTCTGTGA	8	True	NA	-5	True	AATAAA	-13	NA	124863942	124777632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_124778587_124786440_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_46380.known	chr12	-	2493	12	FSM	ENSG00000073060.17	ENST00000681117.1	2493	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	149.49811353463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAATAAACGTTTAAAAAAA	-2	True	NA	-25	True	AATAGA	-41	NA	124863865	124777652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124782682_124782812_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_46390.known	chr12	-	2193	2	FSM	ENSG00000150991.16	ENST00000339647.6	2193	2	0	0	0	0	multi-exon	FALSE	canonical	3	1903	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTTTTTTTTTTTTTT	-1	True	NA	-4	True	AATAAA	-17	NA	124914650	124911645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124913775_124914586
transcript_46391.known	chr12	-	3745	1	FSM	ENSG00000150991.16	ENST00000536769.1	3745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTGAAGGGGGTCA	4768	False	NA	38	True	NA	NA	NA	124915348	124911603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124911600_124915300
transcript_46397.known	chr12	-	4559	27	FSM	ENSG00000150990.9	ENST00000308736.7	4559	27	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_24	18.2679351767325	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGTGGAATGCAC	-34	True	NA	-2	True	AATAAA	-17	NA	124989131	124946825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124947888_124948083_124948182_124949985_124950060_124950148_124950244_124950412_124950551_124950689_124950805_124952397_124952571_124953879_124953997_124954086_124954212_124956690_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124975418_124975512_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_46405.nnic	chr12	-	4485	26	NIC	ENSG00000150990.9	novel	4559	27	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_21	38.4257413721583	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGTGGAATGCAC	NA	False	NA	-2	True	AATAAA	-17	NA	124989150	124946825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_124947888_124948083_124948182_124949985_124950060_124950148_124950244_124950412_124950551_124950689_124950805_124952397_124952571_124953879_124953997_124954086_124954212_124956690_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_46427.known	chr12	-	2806	18	FSM	ENSG00000150990.9	ENST00000679875.1	2806	18	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_15	17.3705792713269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATGCTAATTCTTAGA	3	True	NA	NA	False	NA	NA	NA	124989094	124956409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124975418_124975512_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_46433.known	chr12	+	1911	3	FSM	ENSG00000184992.13	ENST00000672415.1	1911	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAAATCTGTTGTGTCC	0	True	NA	NA	False	NA	NA	NA	124993704	125026499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_124994004_125012533_125012637_125024990
transcript_46437.known	chr12	+	3256	18	FSM	ENSG00000081760.17	ENST00000316519.11	3256	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_11	20.1494416796099	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGTGTGTGCAGTG	-4	True	NA	11	True	AATAAA	-23	NA	125065434	125143316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125136661_125136865_125142091
transcript_46439.nic	chr12	+	3130	17	NIC	ENSG00000081760.17	novel	3256	18	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	40.4204465586416	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGTGTGCAGTGTGC	NA	False	NA	14	True	AATAAA	-26	NA	125065360	125143319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125142091
transcript_46452.nic	chr12	+	2577	12	NIC	ENSG00000081760.17	novel	3256	18	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	66.0157757254135	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGTGTGCAGTGTGC	NA	False	NA	14	True	AATAAA	-26	NA	125065360	125143319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125134002_125134073_125134793_125134853_125142091
transcript_46456.known	chr12	-	2751	8	FSM	ENSG00000139370.12	ENST00000266771.10	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_6	30.1222000985239	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCGGTTCTTTGCGTGG	34	True	NA	-2	True	TATAAA	-24	NA	128823958	128793193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_128794357_128799258_128799418_128800853_128801010_128808787_128808957_128809395_128809474_128809942_128810112_128814774_128815071_128823397
transcript_46457.known	chr12	-	2402	7	FSM	ENSG00000139370.12	ENST00000376744.8	2402	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	99.6789290115463	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGCCGGTTCTTTGCGTG	213	False	NA	-3	True	TATAAA	-23	NA	128823779	128793194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_128794357_128799258_128799418_128800853_128801010_128808787_128808957_128809395_128809474_128814774_128815071_128823397
transcript_46458.known	chr12	+	2995	12	FSM	ENSG00000151948.12	ENST00000442111.6	2995	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	18.5917425907843	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACGAAAATAGCCTCT	-20	True	NA	21	True	AATAAA	-15	NA	128853493	128984956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_128853650_128875913_128876063_128888638_128888745_128899235_128899288_128912423_128912461_128914932_128914990_128926358_128926455_128927104_128927155_128945325_128945370_128947337_128947459_128957544_128957644_128982928
transcript_46462.nnic	chr12	+	2960	10	NIC	ENSG00000151948.12	novel	2995	12	NA	NA	20	0	combination_of_known_splicesites	TRUE	canonical	3	9	junction_4	22.4818170699219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCTTTCTTCCCAC	14	False	NA	33	True	AATAAA	-27	NA	128853446	128984968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_128853650_128875913_128876063_128888638_128888745_128899235_128899288_128926358_128926455_128927104_128927155_128945325_128945370_128947337_128947459_128957544_128957644_128982928
transcript_46466.known	chr12	+	2783	8	FSM	ENSG00000151948.12	ENST00000281703.11	2783	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	19.9407284987591	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCTTTCTTCCCAC	-36	True	NA	33	True	AATAAA	-27	NA	128853477	128984968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_128853650_128875913_128876063_128888638_128888745_128899235_128899288_128945325_128945370_128947337_128947459_128957544_128957644_128982928
transcript_46471.known	chr12	-	3441	11	FSM	ENSG00000111450.14	ENST00000392373.7	3441	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	29.6587255289232	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTGTGGCTGTTACT	-8	True	NA	-17	True	AATAAA	-18	NA	130839250	130789599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_130791978_130795994_130796121_130798524_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
transcript_46476.known	chr12	-	3331	10	FSM	ENSG00000111450.14	ENST00000261653.10	3331	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	63.4350061086148	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTGTGGCTGTTACT	-24	True	NA	-17	True	AATAAA	-18	NA	130839266	130789599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_130791978_130798524_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
transcript_46482.nic	chr12	-	941	9	ISM	ENSG00000111450.14	ENST00000261653.10	3331	10	-18	8955	-18	-162	5prime_fragment	FALSE	canonical	3	181	junction_6	19.5667926600146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATCAAATATCAGAGCAA	NA	False	NA	NA	False	AAGAAA	-9	NA	130839284	130798554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
transcript_46483.nic	chr12	-	382	3	ISM	ENSG00000111450.14	ENST00000261653.10	3331	10	-18	32097	-18	-20443	5prime_fragment	FALSE	canonical	3	229	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAAGTAAGTTGTTGG	NA	False	NA	-6	True	AGTAAA	-37	NA	130839284	130821696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_130821789_130827192_130827268_130839069
transcript_46484.known	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9996	junction_1	1089.01270271134	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	-5	True	NA	35	True	AATATA	-21	NA	130872065	130877678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_46488.known	chr12	+	5390	25	FSM	ENSG00000111452.13	ENST00000261654.10	5390	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.18731723739792	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTCCTTAAAATCTGT	-1	True	NA	NA	False	AATAAA	-20	NA	130953906	131141469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_130954532_130954623_130954661_130966462_130966547_130971457_130971581_130981883_130982064_130987094_130987350_130991013_130991079_130992236_130992393_131000382_131000443_131003184_131003303_131004185_131004297_131005971_131006048_131014198_131014341_131076800_131076875_131084539_131084664_131104830_131104935_131105753_131105866_131108723_131108878_131118384_131118452_131120846_131120914_131131724_131131817_131136036_131136164_131136972_131137015_131138136_131138230_131139167
transcript_46492.known	chr12	+	3219	19	FSM	ENSG00000061936.10	ENST00000541286.5	3219	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	49.4325828468792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAATTTTTGATGACAT	49	False	NA	NA	False	NA	NA	NA	131711136	131799602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131785072_131785229_131786462_131786589_131797177_131797361_131799036_131799110_131799422
transcript_46493.known	chr12	+	3246	18	FSM	ENSG00000061936.10	ENST00000261674.9	3246	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	31.3726348038043	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	2	True	NA	17	True	AATAAA	-29	NA	131711089	131799738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
transcript_46497.nic	chr12	+	2377	14	ISM	ENSG00000061936.10	ENST00000538548.5	2636	15	-11	8402	-2	0	5prime_fragment	FALSE	canonical	3	13	junction_2	29.5440699803855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGCACAAAAAAAGAT	-9	True	NA	36	True	AAGAAA	-8	NA	131711078	131778195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131711448_131714070_131714194_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064
transcript_46498.nic	chr12	+	2424	14	ISM	ENSG00000061936.10	ENST00000541286.5	3219	19	-58	21407	-2	0	5prime_fragment	FALSE	canonical	3	82	junction_2	14.0842771878902	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGCACAAAAAAAGAT	-9	True	NA	36	True	AAGAAA	-8	NA	131711078	131778195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064
transcript_46501.nic	chr12	+	2185	13	NIC	ENSG00000061936.10	novel	3246	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	31.2792085719714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGCACAAAAAAAGAT	-1	True	NA	36	True	AAGAAA	-8	NA	131711086	131778195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131766117_131766309_131778064
transcript_46505.nic	chr12	+	962	5	ISM	ENSG00000061936.10	ENST00000541286.5	3219	19	-58	73993	-2	0	5prime_fragment	FALSE	canonical	3	82	junction_2	9.98436277385793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGTGACGAGAAAAAA	-9	True	NA	NA	False	NA	NA	NA	131711078	131725609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404
transcript_46506.known	chr12	+	3536	4	FSM	ENSG00000061936.10	ENST00000540469.5	3536	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	43.3769011751134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGTGACGAGAAAAAA	-7	True	NA	NA	False	NA	NA	NA	131711080	131725609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131714194_131714821_131714954_131719453_131719540_131725404
transcript_46507.nnic	chr12	+	694	4	NNC	ENSG00000061936.10	novel	1576	3	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	81.2034482026472	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCGTGGTTTCTTCC	NA	False	NA	16	True	AATAAA	-28	NA	131796071	131799737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_131796195_131797177_131797361_131799036_131799110_131799422
transcript_46511.known	chr12	+	5593	12	FSM	ENSG00000061936.10	ENST00000535236.5	5593	12	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_9	11.080471989231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAAAGAAAAA	12	True	NA	22	True	NA	NA	NA	131711099	131778181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064
transcript_46512.known	chr12	+	2411	10	FSM	ENSG00000198598.7	ENST00000360564.5	2411	10	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	32.3102246554237	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCGGCTCGGCTGGGCTC	-14	True	NA	23	True	NA	NA	NA	131828392	131851771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131828654_131838194_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131845117_131845201_131845296_131845450_131849801_131850060_131850924
transcript_46523.known	chr12	+	4041	6	FSM	ENSG00000177192.14	ENST00000376649.8	4041	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	32.9448023214588	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTCATTCTCTAAT	3	True	NA	5	True	AATAAA	-19	NA	131929275	131945896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_46526.known	chr12	+	1664	6	FSM	ENSG00000177192.14	ENST00000443358.6	1664	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	67.3421116390034	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	-1	True	NA	39	True	ATTAAA	-25	NA	131929199	131943859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131929381_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_46528.nic	chr12	+	1692	6	NIC	ENSG00000177192.14	novel	1664	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	68.4765653344266	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	-5	True	NA	39	True	ATTAAA	-25	NA	131929195	131943859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131929405_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_46548.nic	chr12	+	2861	9	ISM	ENSG00000183495.14	ENST00000389561.7	12289	53	-141	89785	-141	0	5prime_fragment	FALSE	canonical	3	12	junction_2	14.0395646300019	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	0	True	NA	22	True	AATAAA	-27	NA	131949800	131990675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131950037_131960584_131961955_131979693_131979794_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_46550.nic	chr12	+	2749	9	NIC	ENSG00000183495.14	novel	3092	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	8.29815491540137	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	-43	True	NA	22	True	AATAAA	-27	NA	131949909	131990675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131950037_131960584_131961955_131979696_131979794_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_46553.nic	chr12	+	2753	8	NIC	ENSG00000183495.14	novel	2588	8	NA	NA	-141	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	19.0177146205257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	0	True	NA	22	True	AATAAA	-27	NA	131949800	131990675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131950037_131960584_131961955_131979693_131979794_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_46554.nnic	chr12	+	2741	8	NNC	ENSG00000183495.14	novel	2588	8	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	16.9260094504986	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	0	True	NA	22	True	AATAAA	-27	NA	131949800	131990675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_131950037_131960584_131961955_131979696_131979785_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_46556.known	chr12	+	2588	8	FSM	ENSG00000183495.14	ENST00000332482.8	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	15.3715878908366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	10	True	NA	22	True	AATAAA	-27	NA	131949962	131990675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131950037_131960584_131961955_131979696_131979794_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_46565.nic	chr12	+	2006	6	FSM	ENSG00000185684.16	ENST00000690966.1	1994	6	-12	0	-4	0	multi-exon	FALSE	canonical	2	8	junction_3	21.5072080940321	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGTTCTGTTAACTTT	-28	True	NA	15	True	ATTAAA	-17	NA	132084270	132108899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132084400_132084963_132085317_132090848_132090944_132103996_132104171_132104377_132105305_132108571
transcript_46566.known	chr12	+	1756	6	FSM	ENSG00000185684.16	ENST00000443539.6	1756	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	23.8461736972622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTAGTTCTGTTAACTT	32	False	NA	14	True	ATTAAA	-16	NA	132084330	132108898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132084400_132084963_132085317_132090848_132090944_132103996_132104171_132104566_132105305_132108571
transcript_46573.known	chr12	+	2172	5	FSM	ENSG00000185684.16	ENST00000392352.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	26.4764045897475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGTTCTGTTAACTTT	181	False	NA	15	True	ATTAAA	-17	NA	132084479	132108899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132085317_132090848_132090944_132103996_132104171_132104566_132105305_132108571
transcript_46575.nic	chr12	+	1548	4	FSM	ENSG00000185684.16	ENST00000454179.7	1456	4	-10	-82	-2	0	multi-exon	FALSE	canonical	3	4	junction_1	27.9801516952444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGTTCTGTTAACTTT	-18	True	NA	15	True	ATTAAA	-17	NA	132084280	132108899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132084400_132103996_132104171_132104377_132105305_132108571
transcript_46578.known	chr12	+	564	3	FSM	ENSG00000185684.16	ENST00000539351.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACCACAGCTCTGC	-9	True	NA	NA	False	GGGGCT	-40	NA	132084289	132085509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132084400_132084963_132085317_132085408
transcript_46583.known	chr12	-	4702	15	FSM	ENSG00000185163.10	ENST00000397333.4	4702	15	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_8	19.5328086112801	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGTGTGTGTGTGTGT	4	True	NA	-5	True	ATTAAA	-14	NA	132144319	132136593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132139299_132139634_132139770_132139860_132139925_132140097_132140200_132140422_132140540_132140619_132140736_132140830_132141021_132141274_132141421_132141497_132141607_132141849_132141957_132142118_132142191_132142276_132142423_132142727_132142879_132143694_132143910_132143992
transcript_46598.known	chr12	+	1650	15	FSM	ENSG00000184967.7	ENST00000330579.6	1650	15	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_5	35.6974960535021	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	6	True	NA	39	True	AATAAA	-14	NA	132144456	132152468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148608_132148660_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
transcript_46604.nnic	chr12	+	1653	14	NIC	ENSG00000184967.7	novel	1650	15	NA	NA	-54	0	combination_of_known_splicesites	TRUE	canonical	3	23	junction_7	107.959065220636	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	NA	False	NA	39	True	AATAAA	-14	NA	132144402	132152468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
transcript_46620.known	chr12	-	1484	2	FSM	ENSG00000256576.3	ENST00000538731.3	1517	2	33	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCGGCTGGTATTTCC	13	True	NA	2	True	ATTAAA	-28	NA	132189695	132186734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132187702_132189178
transcript_46621.known	chr12	-	2933	11	FSM	ENSG00000182870.13	ENST00000328957.13	2933	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.60768096208106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTGCTTACTATTGTC	21	False	132329610	NA	False	AATAAA	-27	NA	132329589	132196371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132197254_132197791_132197960_132199173_132199270_132201123_132201262_132203504_132203691_132247909_132248028_132257688_132257887_132260947_132261123_132262458_132262626_132286249_132286431_132328965
transcript_46623.known	chr12	-	1001	6	FSM	ENSG00000182870.13	ENST00000541995.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.89827534923789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCGCTGGGCCGAGCCAG	302	False	NA	NA	False	NA	NA	NA	132205792	132197072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132197254_132197791_132197960_132199173_132199270_132201123_132201262_132203504_132203691_132205560
transcript_46634.known	chr12	+	3039	2	FSM	ENSG00000256542.2	ENST00000537762.2	3039	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCAGTTTCCCCATA	1926	False	NA	3	True	AATAAA	-15	NA	132277348	132280900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132277907_132278419
transcript_46635.known	chr12	+	1766	3	FSM	ENSG00000256943.1	ENST00000376617.3	1766	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATACAAGTTATTTGAG	21	False	NA	NA	False	AATAAA	-14	NA	132275443	132278329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132275837_132276230_132276531_132277256
transcript_46636.known	chr12	+	1793	1	FSM	ENSG00000277011.1	ENST00000613430.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGATGTGGCTGAGGTG	30	False	NA	NA	False	AATAAA	-15	NA	132282813	132284606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132282800_132284600
transcript_46639.known	chr12	-	705	1	FSM	ENSG00000274373.1	ENST00000622182.1	705	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCATTGATAATAATATCA	3954	False	NA	1	True	ATTAAA	-20	NA	132425208	132424503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132424500_132425200
transcript_46641.known	chr12	+	4219	1	FSM	ENSG00000280287.1	ENST00000624087.1	4219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAAAATGTGC	NA	False	NA	NA	False	NA	NA	NA	132550728	132554947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132550700_132554900
transcript_46642.known	chr12	+	1222	12	FSM	ENSG00000187848.15	ENST00000348800.9	1222	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.4997048281673	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCTCACTGGACTGCAG	12	False	NA	NA	False	NA	NA	NA	132618816	132621979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132618990_132619438_132619575_132619678_132619751_132619843_132619920_132619999_132620097_132620266_132620348_132620444_132620584_132621000_132621132_132621254_132621346_132621474_132621541_132621618_132621697_132621897
transcript_46651.known	chr12	-	7823	49	FSM	ENSG00000177084.18	ENST00000320574.10	7823	49	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	50.648691301509	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTTGTCACTGTGTAT	11	True	NA	NA	False	NA	NA	NA	132687342	132623761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132624811_132624904_132624995_132625644_132625771_132626116_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641646_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968_132661165_132661526_132661685_132664003_132664149_132664369_132664463_132665301_132665451_132667502_132667649_132668355_132668503_132668634_132668738_132668810_132668940_132672214_132672323_132672626_132672840_132673163_132673278_132673574_132673708_132675397_132675518_132675734_132675821_132676093_132676205_132676545_132676654_132677362_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
transcript_4667.known	chr1	-	8421	4	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8950	-7	-13	7	3prime_fragment	FALSE	canonical	3	84	junction_3	25.381533094402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTCAGCTCTTTTG	-3	True	NA	-6	True	AATAAA	-27	NA	23168858	23084022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_23089054_23091189_23094381_23109021_23109128_23168765
transcript_46671.nnic	chr12	+	2290	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	93.692760303736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-3	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721275_132721854
transcript_46672.nnic	chr12	+	2301	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.692760303736	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-3	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721319_132721887
transcript_46673.nnic	chr12	+	2348	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	93.692760303736	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-3	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721332_132721853
transcript_46674.nnic	chr12	+	2426	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	93.692760303736	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-3	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721370_132721813
transcript_46675.nnic	chr12	+	1780	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	93.692760303736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-3	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721371_132722460
transcript_46676.nnic	chr12	+	1896	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	93.692760303736	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-3	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721396_132722369
transcript_46677.nnic	chr12	+	2605	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.692760303736	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-3	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721454_132721718
transcript_46682.known	chr12	+	1182	6	FSM	ENSG00000247077.7	ENST00000317555.6	1182	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	99.2967270356883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCTCTTCTCTGGATC	2	True	NA	NA	False	ACTAAA	-17	NA	132710818	132719166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132718761
transcript_46683.known	chr12	+	2811	6	FSM	ENSG00000247077.7	ENST00000498926.7	2811	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	55.6754883229595	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	-15	True	NA	16	True	AATAAA	-25	NA	132710841	132722734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677
transcript_4669.known	chr1	-	1190	4	FSM	ENSG00000169641.14	ENST00000471849.5	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	41.3628926562068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	9271	False	NA	NA	False	AAGAAA	-2	NA	23168845	23093442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23094381_23109021_23109128_23109584_23109651_23168765
transcript_46692.known	chr12	+	970	5	FSM	ENSG00000176894.10	ENST00000317479.8	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	21.3834047803431	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	-34	True	NA	20	True	AATAAA	-21	NA	132687586	132704985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132687793_132690262_132690377_132695883_132696047_132701249_132701370_132704618
transcript_46700.known	chr12	+	632	3	FSM	ENSG00000176894.10	ENST00000543589.5	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	21	True	NA	20	True	AATAAA	-21	NA	132687641	132704985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132687793_132690262_132690377_132704618
transcript_46705.nnic	chr12	-	4565	14	NNC	ENSG00000176915.15	novel	4590	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_12	189.033731062184	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGTGGACCACTGC	1	True	NA	-12	True	AGTAAA	-16	NA	132761844	132725667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132756633_132756762_132761617
transcript_46708.nnic	chr12	-	3101	14	NNC	ENSG00000176915.15	novel	4590	13	NA	NA	-31	422	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	149.939238186437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGTTATTTTGGAACTC	225	False	NA	-31	True	CATAAA	-18	NA	132761863	132726383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_132726584_132727222_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
transcript_46712.nnic	chr12	-	3100	14	NNC	ENSG00000176915.15	novel	4590	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_12	189.033731062184	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGGGTGTGAGAATT	1	True	NA	-34	True	ATTAAA	-13	NA	132761844	132727132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132756633_132756762_132761617
transcript_46714.known	chr12	-	4590	13	FSM	ENSG00000176915.15	ENST00000357997.10	4590	13	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_4	58.6095839716794	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCGTGGTAATAATTGCAA	256	False	132761845	4	True	AATGAA	-17	NA	132761832	132725502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
transcript_46721.nic	chr12	-	3821	12	NIC	ENSG00000176915.15	novel	4590	13	NA	NA	-31	0	intron_retention	FALSE	canonical	3	481	junction_3	55.2802028437512	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGGGTGTGAGAATT	225	False	NA	-34	True	ATTAAA	-13	NA	132761863	132727132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
transcript_46729.nic	chr12	-	2023	11	ISM	ENSG00000176915.15	ENST00000357997.10	4590	13	-31	4701	-31	29	5prime_fragment	FALSE	canonical	3	467	junction_2	48.9546729128078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGCAAAATGCAGCTCGAA	225	False	NA	NA	False	AATAAA	-4	NA	132761863	132730203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
transcript_4675.nic	chr1	-	927	3	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8949	9624	-14	-211	internal_fragment	FALSE	canonical	3	84	junction_2	17.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAAAATGAGAAAT	-4	True	NA	18	True	AATGAA	-3	NA	23168859	23093653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_23094381_23109021_23109128_23168765
transcript_46756.nic	chr12	-	3254	18	NIC	ENSG00000072609.18	novel	11228	18	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	172	junction_13	66.3829198026306	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-30	True	NA	-14	True	AATAAA	-20	NA	132887630	132840351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46758.nic	chr12	-	3417	18	NIC	ENSG00000072609.18	novel	2648	18	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_13	85.4447756658142	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	NA	False	NA	-14	True	AATAAA	-20	NA	132887757	132840351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46761.known	chr12	-	11133	18	FSM	ENSG00000072609.18	ENST00000266880.11	11133	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	117.564382714515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCTACACCTTAGGATA	2	True	NA	51	True	ATTAAA	-20	NA	132887598	132832356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132862332_132862426_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46763.known	chr12	-	11228	18	FSM	ENSG00000072609.18	ENST00000450056.7	11228	18	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_13	68.0782675971645	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTACACCTTAGGATAG	-5	True	NA	52	True	ATTAAA	-21	NA	132887605	132832355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46764.known	chr12	-	2648	18	FSM	ENSG00000072609.18	ENST00000432561.6	2648	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_13	86.694867206773	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGTATGGTATTT	-8	True	NA	-82	True	AATATA	-27	NA	132887608	132840974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46774.nic	chr12	-	3099	17	NIC	ENSG00000072609.18	novel	11228	18	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	2	55	junction_12	85.4416604692933	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	NA	False	NA	-14	True	AATAAA	-20	NA	132887655	132840351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46778.nic	chr12	-	3059	17	NIC	ENSG00000072609.18	novel	11228	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	55	junction_12	86.8155372038899	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-12	True	NA	-14	True	AATAAA	-20	NA	132887612	132840351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46790.nic	chr12	-	3014	16	NIC	ENSG00000072609.18	novel	2990	16	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	50	junction_12	89.2055304713035	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-30	True	NA	-14	True	AATAAA	-20	NA	132887630	132840351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46791.known	chr12	-	2990	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_12	90.6091974728099	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-3	True	NA	-14	True	AATAAA	-20	NA	132887603	132840351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_46803.nic	chr12	-	2775	12	ISM	ENSG00000090615.16	ENST00000545875.4	3784	16	-29	7370	0	-2192	5prime_fragment	FALSE	canonical	3	10	junction_11	4.79496981608749	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGTTTCTCCAACAAA	-13	True	NA	NA	False	AATAAA	-1	NA	132828869	132791237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_132791294_132795851_132796221_132796538_132796701_132798339_132798478_132801766_132801970_132804715_132805023_132807176_132807289_132807890_132808550_132813306_132813420_132816539_132816813_132821995_132822312_132828802
transcript_46813.known	chr12	+	555	2	FSM	ENSG00000236617.2	ENST00000424075.2	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGAGTCTCTCAACG	NA	False	NA	NA	False	AATAAA	-26	NA	132887841	132888583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132887933_132888119
transcript_46814.known	chr12	-	838	4	FSM	ENSG00000196458.11	ENST00000331711.11	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCTCACGGTTCATCA	4	True	NA	NA	False	NA	NA	NA	132956291	132926671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132927163_132933034_132933156_132945620_132945798_132956242
transcript_46818.known	chr12	-	6156	5	FSM	ENSG00000196458.11	ENST00000392321.3	6156	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	12.1346610995116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATTCTCCCATGCCC	-11	True	NA	-10	True	AATAAA	-13	NA	132956306	132921461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132927163_132932712_132932806_132933034_132933156_132945620_132945798_132956242
transcript_4682.nnic	chr1	-	3488	3	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTGGGTGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	23217527	23191894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23195002_23207089_23207234_23217290
transcript_46822.known	chr12	+	17697	4	FSM	ENSG00000198393.8	ENST00000328654.10	17697	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	12.3648246606609	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACTGCTCTCTCATTAT	1	True	NA	NA	False	ATTAAA	-16	NA	132986366	133027102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132986874_133007041_133007169_133007436_133007533_133010135
transcript_46824.known	chr12	+	6811	5	FSM	ENSG00000198040.11	ENST00000539354.6	6811	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	58.1592640943814	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	5	True	NA	14	True	AATAAA	-18	NA	133037508	133063299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_46825.known	chr12	+	3501	5	FSM	ENSG00000198040.11	ENST00000543758.5	3501	5	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_4	115.024725602802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTAGTGGTATTTGTGG	11	True	NA	20	True	AATAAA	-25	NA	133037300	133059606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133037546_133041099_133041483_133047954_133048082_133048752_133048849_133056956
transcript_46827.known	chr12	+	637	3	FSM	ENSG00000198040.11	ENST00000539686.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	115.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCACATCTTATACCA	21	True	NA	NA	False	NA	NA	NA	133037524	133048356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133037555_133041277_133041483_133047954
transcript_46829.known	chr12	+	558	4	FSM	ENSG00000198040.11	ENST00000536123.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	111.547697819762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCTTCAAATTGGAGCA	26	True	NA	NA	False	NA	NA	NA	133037529	133048775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133037555_133041099_133041483_133047954_133048082_133048752
transcript_4683.nnic	chr1	-	3337	3	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTGGGTGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	23217549	23191894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23195002_23207089_23207234_23217463
transcript_46830.known	chr12	+	553	4	FSM	ENSG00000196387.10	ENST00000412146.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	53.6739125543209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAGGATCATACTGAG	438	False	NA	NA	False	TTTAAA	-11	NA	133080874	133105641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133081073_133083102_133083230_133083465_133083562_133105509
transcript_46831.known	chr12	-	17294	2	FSM	ENSG00000214029.6	ENST00000537226.3	17294	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGACAAATATAAGC	-10	True	NA	-4	True	AATAAA	-17	NA	133130274	133104778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_133122025_133130226
transcript_46833.known	chr12	+	2349	5	FSM	ENSG00000196387.10	ENST00000355557.7	2349	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	36.1481327318577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	5	True	NA	66	True	AATAAA	-20	NA	133080922	133107428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_46834.known	chr12	+	3773	7	FSM	ENSG00000090612.22	ENST00000541009.6	3773	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	19.238993967692	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGTTATTATATCTT	18	False	NA	68	True	NA	NA	NA	133181558	133205173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_46838.known	chr12	+	13390	6	FSM	ENSG00000090612.22	ENST00000536435.7	13390	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	25.7402408691139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCACCAGGGTCAGCC	-13	True	NA	NA	False	AATAAA	-19	NA	133181494	133214832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133202143
transcript_46839.known	chr12	+	686	6	FSM	ENSG00000090612.22	ENST00000592241.5	686	6	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	39.9479661559885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCCTAATGGGTTTC	79	False	NA	NA	False	AATATA	-26	NA	133181619	133202348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_46840.known	chr12	+	861	4	FSM	ENSG00000090612.22	ENST00000542711.6	861	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	41.7372735094184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATCAGAGAATTCATACA	3	True	NA	NA	False	AGTAAA	-14	NA	133181510	133202647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133191907_133192004_133202143
transcript_46845.known	chr13	-	2013	10	FSM	ENSG00000121390.19	ENST00000619300.4	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	122.338328690017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTTATTAGTGGTAT	NA	False	NA	-9	True	AATAAA	-21	NA	19783019	19702870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385_19782792_19782916
transcript_46850.known	chr13	-	2435	9	FSM	ENSG00000121390.19	ENST00000338910.9	2435	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	61.7493674056666	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGAAGGCAAATCTCT	-1	True	NA	NA	False	AATAAA	-22	NA	19782945	19702499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_46852.known	chr13	-	1647	8	FSM	ENSG00000121390.19	ENST00000471658.5	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	141.519307112896	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTGTCATTTTGT	58	False	NA	-21	True	ATTAAA	-14	NA	19782917	19674755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19674985_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_46853.known	chr13	-	1709	8	FSM	ENSG00000121390.19	ENST00000492741.5	1709	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	148.316952393673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTGTGGTGGTCTTG	2	True	NA	-2	True	ATTAAA	-17	NA	19782942	19675387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19675654_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_4686.known	chr1	-	3319	2	FSM	ENSG00000179546.5	ENST00000374619.2	3319	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTGGGTGATTT	-5	True	NA	-2	True	AATAAA	-22	NA	23217502	23191894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23195002_23217290
transcript_46860.known	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	25.5494718184952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-2	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_46865.known	chr13	-	1382	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	22.7367543857957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-3	True	NA	-11	True	AATAAA	-17	NA	19863524	19837464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_46868.known	chr13	-	1622	5	FSM	ENSG00000132950.19	ENST00000467542.5	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	25.3118055460293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-3	True	NA	-11	True	AATAAA	-17	NA	19863524	19837464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19852191_19862398_19862467_19863449
transcript_4687.nnic	chr1	-	3207	2	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	-68	-7	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCAGTAATGTCTTTGG	NA	False	NA	-9	True	AATAAA	-15	NA	23217570	23191901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23195002_23217463
transcript_46871.known	chr13	+	1191	1	FSM	ENSG00000275964.1	ENST00000620617.1	1191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGAGCCCCGTTTTAC	13	False	NA	23	True	AATACA	-22	NA	19863857	19865048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19863900_19865000
transcript_46875.known	chr13	+	5051	26	FSM	ENSG00000121741.17	ENST00000382871.3	5051	26	0	0	0	0	multi-exon	FALSE	canonical	2	88	junction_2	108.496222975733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATGTATGTATGTGT	14	False	NA	15	True	AATAAA	-19	NA	19958782	20086746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_46882.known	chr13	+	7429	25	FSM	ENSG00000121741.17	ENST00000610343.5	7429	25	0	0	0	0	multi-exon	FALSE	canonical	2	270	junction_10	73.199771838594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	-4	True	NA	NA	False	AATAAA	-16	NA	19958726	20089115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_46896.known	chr13	+	1912	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	47.646658661785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	-8	True	NA	NA	False	TATAAA	-42	NA	19958676	20019963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_46899.nic	chr13	+	2177	7	ISM	ENSG00000121741.17	ENST00000610343.5	7429	25	-54	69152	-4	0	5prime_fragment	FALSE	canonical	3	280	junction_4	19.8130148022848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	-12	True	NA	NA	False	TATAAA	-42	NA	19958672	20019963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_46909.known	chr13	-	2290	2	FSM	ENSG00000165474.8	ENST00000382848.5	2290	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATCTAATATGGTTT	-2	True	NA	NA	False	ATTAAA	-19	NA	20192938	20187469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20189604_20192782
transcript_46910.known	chr13	-	1483	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	3.36852174930046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTCTCTTTTGGTTT	-22	True	NA	-1	True	AATAAA	-21	NA	20525857	20403668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
transcript_46911.known	chr13	-	1331	7	FSM	ENSG00000165475.15	ENST00000644593.1	1331	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.94694069321861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCTTTTGGTTTTT	-30	True	NA	1	True	AATAAA	-23	NA	20525865	20403666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20489369_20489497_20512442_20512551_20525753
transcript_46916.known	chr13	+	2850	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_14	12.9122577421611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTATGTAGTCA	-14	True	NA	94	True	AATAAA	-21	NA	20567156	20691444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_46925.known	chr13	+	3091	28	FSM	ENSG00000032742.18	ENST00000319980.10	3091	28	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	18.0366187494277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGTACATATATGTGTAT	-33	True	NA	87	True	AATAAA	-14	NA	20567137	20691437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_20567257_20567669_20567786_20567884_20567998_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_46928.known	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	7.17635004720366	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-12	True	NA	NA	False	NA	NA	NA	20773961	20728730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
transcript_4693.known	chr1	-	2691	11	FSM	ENSG00000125944.21	ENST00000374616.7	2691	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	644.336255382234	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	340	False	NA	-16	True	AATAAA	-26	NA	23344310	23309782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_46931.known	chr13	-	9921	23	FSM	ENSG00000132953.18	ENST00000255305.11	9857	23	-64	0	-63	0	multi-exon	TRUE	non_canonical	0	0	junction_3	35.5978746231562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAAAACAGATTTCAT	217	False	NA	-6	True	AATAAA	-22	NA	20902810	20777328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20783920_20786964_20787058_20787480_20787599_20788485_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
transcript_46933.nnic	chr13	-	3159	20	NIC	ENSG00000132953.18	novel	9857	23	NA	NA	-15	-6372	combination_of_known_splicesites	TRUE	canonical	3	26	junction_1	31.16545071966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATCCTTTCTGCAAAG	8	True	NA	-22	True	AATAAA	-21	NA	20902762	20783700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_20783920_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
transcript_46936.nic	chr13	-	839	3	ISM	ENSG00000132953.18	ENST00000255305.11	9857	23	-283	85157	19	5927	5prime_fragment	FALSE	canonical	3	155	junction_1	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-2	True	NA	NA	False	AAAAAG	-9	NA	20903029	20862485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_20862859_20868595_20868702_20902669
transcript_46937.known	chr13	-	5546	8	FSM	ENSG00000150457.9	ENST00000382592.5	5546	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	8.79471084092651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTAGTTGGTGTCATGT	-38	True	NA	-6	True	ATTAAA	-15	NA	21061586	20973035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20975365_20979690_20979798_20981465_20981649_20983223_20983807_20987880_20989305_20991271_20991405_21045684_21046231_21061345
transcript_46941.nic	chr13	-	1740	3	ISM	ENSG00000150457.9	ENST00000382592.5	5546	8	-10	17426	-10	-1452	5prime_fragment	FALSE	canonical	3	27	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGTAATTAGCAAGAGT	-48	True	NA	NA	False	TTTAAA	-24	NA	21061596	20990461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_20991405_21045684_21046231_21061345
transcript_46946.known	chr13	+	2234	4	FSM	ENSG00000150459.12	ENST00000607003.5	2234	4	0	0	0	0	multi-exon	FALSE	canonical	3	2924	junction_2	115.467167050494	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTGCTCAGTGCTTTA	-8	True	NA	9	True	AATAAA	-19	NA	21140577	21149082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_21140682_21140885_21140996_21146804_21146928_21147185
transcript_46949.known	chr13	+	670	3	FSM	ENSG00000150459.12	ENST00000467636.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1462	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTGTGAAAGTTAATG	300	False	NA	15	True	AATATA	-14	NA	21140885	21147603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_21140996_21146804_21146928_21147166
transcript_4695.known	chr1	-	2694	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	460.752688543431	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-1	True	NA	-19	True	AATAAA	-23	NA	23344322	23309785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
transcript_46951.known	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	88.5549793913363	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	6	True	NA	-1	True	AATAAA	-19	NA	21176552	21153594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_4696.known	chr1	-	7646	10	FSM	ENSG00000125944.21	ENST00000478691.5	7646	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	587.12011095802	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTGGTGATTTTGG	314	False	NA	0	True	AATAAA	-18	NA	23344336	23304687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
transcript_46960.known	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	134.502105286611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	10	True	NA	-1	True	AATAAA	-19	NA	21176548	21153594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
transcript_46961.known	chr13	-	2745	8	FSM	ENSG00000165480.16	ENST00000400018.7	2745	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	161.696112053015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	11	True	NA	-1	True	AATAAA	-19	NA	21176547	21153594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_46976.nic	chr13	-	986	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-58	14283	-58	344	5prime_fragment	FALSE	canonical	3	464	junction_3	57.9674238018408	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAGATATTTATTTAT	773	False	NA	4	True	AATAAA	-28	NA	21176610	21167877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_46978.nic	chr13	-	748	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-58	14521	-58	106	5prime_fragment	FALSE	canonical	3	464	junction_3	57.9674238018408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCACTAAAAATGGATGA	773	False	NA	36	True	AGTAAA	-20	NA	21176610	21168115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_46979.known	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	171.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	7	True	NA	NA	False	NA	NA	NA	21176551	21154696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21155692_21155812_21176374
transcript_46985.known	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1550	junction_1	0	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	-15	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_21176718_21176911
transcript_46994.nnic	chr13	-	4627	13	NNC	ENSG00000180776.16	novel	5355	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	64.4526096359867	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	21459375	21372570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_21374335_21375056_21376656_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
transcript_46999.known	chr13	-	1351	13	FSM	ENSG00000180776.16	ENST00000320220.13	1351	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	78.0133090497313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTGTCCATTTGTGC	-8	True	NA	NA	False	NA	NA	NA	21459248	21376486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21376656_21381433_21381550_21381900_21381946_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
transcript_47.known	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	960	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00136_+_0_1000
transcript_47001.known	chr13	-	5338	12	FSM	ENSG00000180776.16	ENST00000382466.7	5338	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	53.4216039500411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTCTTTGTTATAA	-57	True	NA	-8	True	AATAAA	-17	NA	21459369	21372572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21376656_21381433_21381547_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
transcript_47006.known	chr13	-	1885	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_4	33.7462578274299	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGTGCTTTTTATTT	-8	True	NA	NA	False	AATAAA	-23	NA	21604170	21492690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_47009.nic	chr13	-	1741	9	ISM	ENSG00000165487.14	ENST00000382374.9	1885	12	-3	9452	-3	684	5prime_fragment	FALSE	canonical	3	285	junction_1	25.8553669476958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATAGCCTTGATGGATA	-11	True	NA	NA	False	AATAAA	-24	NA	21604173	21502142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_47012.known	chr13	-	15635	10	FSM	ENSG00000151835.17	ENST00000382292.9	15635	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.13006159296628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGTAATGGGTGTTTCC	2	True	NA	-7	True	AATAAA	-20	NA	23433702	23328829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
transcript_47019.nic	chr13	-	2479	8	ISM	ENSG00000151835.17	ENST00000683270.1	7009	10	-125	24686	-16	0	5prime_fragment	FALSE	canonical	3	29	junction_7	6.26620348556037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTAAAAGTTTTCTGT	NA	False	NA	-15	True	AATAAA	-20	NA	23375616	23353735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
transcript_47021.known	chr13	-	2782	7	FSM	ENSG00000151835.17	ENST00000683154.1	2782	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	6.20259802197613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTAACTGACTTGAAAAT	-2	True	NA	NA	False	AATAAA	-7	NA	23375509	23353967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
transcript_47024.known	chr13	-	2500	2	FSM	ENSG00000151835.17	ENST00000683638.1	2500	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACACCATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	23433763	23409389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23411741_23433614
transcript_47028.known	chr13	-	2381	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_12	23.1095752694809	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTTTCACCTGTTT	22	True	NA	-23	True	AATAAA	-17	NA	23889400	23730188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
transcript_47031.known	chr13	+	852	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGTGAACAACTTTGG	NA	False	NA	8	True	AATAAA	-20	NA	23888841	23892104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
transcript_47033.known	chr13	+	8454	13	FSM	ENSG00000182957.16	ENST00000382108.8	8454	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	9.12376323429952	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTCTGATGATGCATTT	0	True	NA	7	True	ATTAAA	-15	NA	24160719	24307069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_24160933_24222818_24224583_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
transcript_47034.known	chr13	+	6665	12	FSM	ENSG00000182957.16	ENST00000382095.8	6665	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.1104651908565	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGATGATGCATTTGAG	-13	True	NA	10	True	ATTAAA	-18	NA	24160747	24307072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_24160933_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
transcript_47035.nic	chr13	+	2675	5	NIC	ENSG00000182957.16	novel	8454	13	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	20.5791156272567	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAATATAGAAA	NA	False	NA	NA	False	AAGAAA	-26	NA	24160688	24278769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_24160933_24222818_24224583_24249476_24249843_24251717_24251863_24278613
transcript_47038.known	chr13	-	5437	34	FSM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_27	28.4013282323683	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTTCTGTGTCTCA	-12	True	NA	-5	True	AATAAA	-16	NA	24512778	24420930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_24421315_24426465_24426599_24431376_24431477_24434394_24435475_24441845_24441969_24442589_24442686_24443649_24443731_24446680_24446762_24447015_24447187_24449717_24449818_24452405_24452594_24453586_24453655_24455016_24455213_24456340_24456479_24459043_24459123_24459263_24459311_24459971_24460137_24469023_24469111_24469893_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
transcript_47048.known	chr13	+	4406	23	FSM	ENSG00000075673.12	ENST00000381946.5	4406	23	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	4.79001199122017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAATTGTGGTGTTCTA	-2	True	NA	10	True	TATAAA	-5	NA	24680407	24712472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_24680753_24681561_24681721_24685313_24685374_24688318_24688523_24689261_24689376_24690337_24690473_24690603_24690722_24690981_24691251_24692428_24692628_24692786_24692897_24694443_24694579_24698657_24698851_24700746_24700923_24701934_24702072_24706312_24706464_24707022_24707192_24707278_24707434_24709363_24709488_24709682_24709829_24710459_24710594_24710791_24710894_24711317_24711410_24711493
transcript_4705.known	chr1	-	1837	9	FSM	ENSG00000125944.21	ENST00000606561.5	1837	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	533.549420742821	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGAAGAAATCACTATT	-13	True	NA	NA	False	NA	NA	NA	23344295	23310332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23337753_23337862_23338489_23338609_23344210
transcript_47051.known	chr13	+	3732	23	FSM	ENSG00000075673.12	ENST00000218548.10	3732	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.46589727838451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATGTGTAT	1	True	NA	18	True	ATTAAA	-33	NA	24680410	24711783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_24680753_24681561_24681721_24685313_24685374_24688318_24688523_24689261_24689376_24690337_24690473_24690603_24690722_24690963_24691251_24692428_24692628_24692786_24692897_24694443_24694579_24698657_24698851_24700746_24700923_24701934_24702072_24706312_24706464_24707022_24707192_24707278_24707434_24709363_24709488_24709682_24709829_24710459_24710594_24710791_24710894_24711317_24711410_24711493
transcript_47053.known	chr13	-	5082	17	FSM	ENSG00000151849.16	ENST00000381884.9	5082	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_15	19.5560093066045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTACAGATGTATCTA	-19	True	NA	NA	False	AATAAA	-14	NA	24922861	24882278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_47055.nic	chr13	-	1074	4	ISM	ENSG00000151849.16	ENST00000545981.6	4298	18	-110	26644	-31	-20637	5prime_fragment	FALSE	canonical	3	119	junction_2	14.7044966667418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTAACCATCCTACAGGTG	NA	False	NA	NA	False	AAGAAA	-2	NA	24922920	24909806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_24910087_24911945_24912070_24912581_24913092_24922760
transcript_47063.known	chr13	-	10055	3	FSM	ENSG00000165566.13	ENST00000357816.2	10055	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATTCTGTTGGTTGTTA	-2	True	NA	NA	False	AATAAA	-25	NA	25172288	25161683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_25170482_25170838_25171720_25171912
transcript_47065.known	chr13	-	5117	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	12.3028836760152	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTTCTAGGAAAGTAAA	-26	True	NA	NA	False	AATAAA	-20	NA	25287488	25246221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
transcript_47069.known	chr13	+	4236	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	22.9720603245672	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	-6	True	NA	32	True	AATAAA	-29	NA	25301624	25342421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_4707.nic	chr1	-	1191	9	NIC	ENSG00000125944.21	novel	2694	11	NA	NA	-27	-841	combination_of_known_junctions	FALSE	canonical	3	1293	junction_8	216.197247901078	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGGGGAAGAAATTGAA	287	False	NA	-18	True	AAGAAA	-1	NA	23344363	23311294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
transcript_47073.known	chr13	+	2489	15	FSM	ENSG00000139496.16	ENST00000381718.7	2489	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	47.5076792933178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCAGCCTGACATGGT	2	True	NA	NA	False	NA	NA	NA	25301632	25340718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_25301881_25307805_25307949_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_47075.known	chr13	+	582	3	FSM	ENSG00000139496.16	ENST00000460326.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCAGTATTTGAGTA	-6	True	NA	NA	False	AAAAAG	-30	NA	25301624	25309429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_25301881_25307805_25307949_25309246
transcript_47079.known	chr13	-	3845	2	FSM	ENSG00000180730.5	ENST00000319420.4	3845	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGCGGAGTTGGGTTT	0	True	NA	-33	True	AATAAA	-17	NA	26052016	26044596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26047067_26050641
transcript_47080.known	chr13	-	3282	5	FSM	ENSG00000127870.17	ENST00000346166.7	3282	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	37.5666075125237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTTTTCTGTTGTTCC	-15	True	NA	-7	True	AATAAA	-26	NA	26221842	26212761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221781
transcript_47081.known	chr13	-	3520	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	31.4990079208854	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-24	True	NA	-20	True	AATAAA	-13	NA	26222314	26212774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_47082.known	chr13	-	3398	5	FSM	ENSG00000127870.17	ENST00000381570.7	3398	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	46.6744041204599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	587	False	NA	-20	True	AATAAA	-13	NA	26221703	26212774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221513
transcript_47083.known	chr13	+	3065	13	FSM	ENSG00000132964.12	ENST00000381527.8	3065	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_11	12.953978367882	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGTCAGCTGTCTTTT	11	True	NA	6	True	AATAAA	-22	NA	26254128	26405238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26382813_26382872_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401465_26401625_26403955
transcript_47085.known	chr13	+	3032	12	FSM	ENSG00000132964.12	ENST00000536792.5	3032	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	34.2115441344894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGTCAGCTGTCTTTT	-14	True	NA	6	True	AATAAA	-22	NA	26254103	26405238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401465_26401625_26403955
transcript_47089.known	chr13	+	4857	10	FSM	ENSG00000132970.14	ENST00000335327.6	4857	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	27.3405591171707	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTATGTTTGGCTT	-23	True	NA	29	True	AATAAA	-40	NA	26557682	26688948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_26557820_26612960_26613059_26642260_26642404_26665027_26665163_26667516_26667671_26671871_26671990_26676548_26676725_26681053_26681321_26682606_26682975_26685687
transcript_47091.known	chr13	-	4412	9	FSM	ENSG00000152484.14	ENST00000282344.11	4412	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	15.9604002142803	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGTTTCAAGTGTGT	0	True	NA	-19	True	ATTAAA	-16	NA	27171811	27066155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27069385_27071070_27071150_27075190_27075389_27089882_27089967_27090081_27090159_27095600_27095831_27105730_27105945_27116515_27116597_27171591
transcript_47095.known	chr13	+	566	6	FSM	ENSG00000122026.11	ENST00000311549.11	566	6	0	0	0	0	multi-exon	FALSE	canonical	3	12328	junction_1	2750.17683795061	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	2	True	NA	6	True	AATAAA	-21	NA	27251557	27256568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_47096.known	chr13	+	616	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	7519.19576550578	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	-8	True	NA	6	True	AATAAA	-21	NA	27251578	27256568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_47097.known	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	7577.80491699278	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	10	True	NA	6	True	AATAAA	-21	NA	27251596	27256568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_47098.known	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7595.34836594083	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	-4	True	NA	6	True	AATAAA	-21	NA	27251582	27256568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_47099.nic	chr13	+	657	5	ISM	ENSG00000122026.11	ENST00000311549.11	566	6	-251	261	-55	0	5prime_fragment	FALSE	canonical	3	12328	junction_1	2989.62388938809	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCTGGGTTCAACTAAA	NA	False	NA	49	True	AAAAAG	-19	NA	27251306	27256307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255355_27256183
transcript_47102.nic	chr13	+	501	5	ISM	ENSG00000122026.11	ENST00000326092.8	641	6	-20	261	-2	0	5prime_fragment	FALSE	canonical	3	150	junction_1	8212.89344567431	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCTGGGTTCAACTAAA	-10	True	NA	49	True	AAAAAG	-19	NA	27251576	27256307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183
transcript_47108.known	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_7	96.3518941173447	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	-18	True	NA	4	True	ATTAAA	-17	NA	27424618	27435823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_47110.known	chr13	+	1191	8	FSM	ENSG00000122034.17	ENST00000419181.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	301.750471314919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	25	True	NA	14	True	ATTAAA	-16	NA	27424661	27435688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_47115.known	chr13	-	947	5	FSM	ENSG00000122033.15	ENST00000461838.5	947	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	218.557057767531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGTAATTTTAATAAAG	1111	False	NA	-45	True	NA	NA	NA	27450131	27435683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450063
transcript_47116.nic	chr13	-	1349	5	NIC	ENSG00000122033.15	novel	995	5	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	206.697091174501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	20	True	NA	-4	True	AATAAA	-23	NA	27450551	27435642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450141
transcript_47117.known	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_4	62.547481963705	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	7	True	NA	-4	True	AATAAA	-23	NA	27450564	27435642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
transcript_47119.known	chr13	-	785	5	FSM	ENSG00000122033.15	ENST00000460973.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	198.654694130292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAGAAGGTACAAG	-28	True	NA	NA	False	CATAAA	-38	NA	27450196	27437115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27450141
transcript_47120.known	chr13	-	798	5	FSM	ENSG00000122033.15	ENST00000485650.5	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	203.841850462558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAAATGTAGACGTGT	-20	True	NA	NA	False	CATAAA	-4	NA	27450591	27437149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445157_27450508
transcript_47123.nic	chr13	-	767	4	ISM	ENSG00000122033.15	ENST00000381120.8	995	5	-52	1502	-25	0	5prime_fragment	FALSE	canonical	3	397	junction_3	35.6121078036982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAGACGTGTCAGAA	626	False	NA	NA	False	CATAAA	-9	NA	27450616	27437144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_27437274_27439988_27440450_27445087_27445157_27450508
transcript_47127.nnic	chr13	+	575	3	NNC	ENSG00000122034.17	novel	688	6	NA	NA	-8	-3428	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	528.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGGCTTTGCAGAGGA	-26	True	NA	NA	False	NA	NA	NA	27424610	27429317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_27424939_27427091_27427193_27429171
transcript_47128.known	chr13	-	373	3	FSM	ENSG00000122033.15	ENST00000484342.2	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	203.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCAGCGAGTTATTCA	-16	True	NA	NA	False	AATAAA	-28	NA	27450587	27440205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27440450_27445087_27445138_27450508
transcript_47129.known	chr13	+	688	6	FSM	ENSG00000122034.17	ENST00000435781.5	688	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	428.216300483763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACATGGACGGAAC	1	True	NA	NA	False	AAAAAG	-14	NA	27424637	27434169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430537_27430622_27432730_27432805_27434138
transcript_47130.known	chr13	-	4750	10	FSM	ENSG00000139517.9	ENST00000316334.5	4750	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.73618839393479	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGACGTTGTCTCTTTTC	38	True	NA	-5	True	AATAAA	-18	NA	27620529	27545912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27548471_27550332_27550492_27553207_27553440_27556235_27556414_27559841_27559986_27562412_27562782_27567639_27567840_27569028_27569277_27581296_27581804_27620374
transcript_47139.nic	chr13	+	1657	3	NIC	ENSG00000186184.20	novel	693	2	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	219	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	NA	False	NA	30	True	AATAAA	-19	NA	27620731	27623449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_27621141_27621336_27622010_27622874
transcript_47141.known	chr13	+	693	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	9	True	NA	30	True	AATAAA	-19	NA	27621891	27623449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27622010_27622874
transcript_47142.known	chr13	+	1723	3	FSM	ENSG00000186184.20	ENST00000489647.4	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	154.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTCAACCTGTATCTA	-13	True	NA	NA	False	AATGAA	-10	NA	27621869	27651549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27622010_27648378_27648454_27650041
transcript_47143.known	chr13	-	3826	24	FSM	ENSG00000122025.15	ENST00000241453.12	3826	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	2.85768290872261	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCTTCATTTTATTTTT	7	True	NA	NA	False	AATAAA	-19	NA	28100576	28003273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28004175_28014451_28014558_28015156_28015257_28015589_28015702_28018466_28018590_28023349_28023478_28024860_28024944_28027087_28027242_28028177_28028289_28033886_28033992_28034081_28034215_28034300_28034408_28035494_28035674_28035934_28036044_28037184_28037289_28048274_28048444_28049383_28049538_28049634_28049775_28050094_28050223_28052544_28052675_28057346_28057463_28061866_28062070_28070490_28070613_28100467
transcript_47145.known	chr13	-	7123	30	FSM	ENSG00000102755.12	ENST00000282397.9	7123	30	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_16	52.819842774523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTCTCCCTGATTTG	-1	True	NA	-3	True	AATAAA	-15	NA	28495128	28300345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28303369_28306677_28306773_28308842_28308928_28311589_28311733_28311992_28312099_28317497_28317598_28319422_28319535_28321462_28321586_28322261_28322360_28322789_28322947_28327461_28327551_28329614_28329729_28334024_28334130_28339167_28339301_28345444_28345552_28357553_28357686_28384884_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_47150.known	chr13	-	2969	15	FSM	ENSG00000102755.12	ENST00000541932.5	2969	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	45.6687272984613	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGCCTACTCTGAGCC	-1	True	NA	-10	True	ATTAAA	-16	NA	28495128	28368095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28368664_28384884_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_47151.known	chr13	-	6453	13	FSM	ENSG00000102755.12	ENST00000615840.4	6453	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	20.8531572349768	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTGTTTGGTCTGCTG	200	False	NA	82	True	AATAAA	-20	NA	28495079	28385547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_47159.known	chr13	+	1428	7	FSM	ENSG00000132963.8	ENST00000460403.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4024.75662480216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTTGATTAGATAAATT	-35	True	NA	NA	False	ATTAAA	-31	NA	28659103	28678925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_28659188_28659821_28659920_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_47160.known	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7301	junction_1	650.754823262955	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	-9	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_47163.known	chr13	-	7343	13	FSM	ENSG00000139514.13	ENST00000380752.10	7343	13	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_12	22.9921484182946	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATGGTGTGATCTCAA	-2	True	NA	-18	True	AATAAA	-15	NA	29595688	29509413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_29514584_29516137_29516247_29517143_29517311_29517572_29517791_29519446_29519550_29522316_29522457_29523265_29523489_29524131_29524254_29530537_29530713_29532823_29532983_29535818_29536203_29553760_29553861_29595415
transcript_47166.nnic	chr13	-	4732	12	NIC	ENSG00000139514.13	novel	7343	13	NA	NA	-45	-2556	combination_of_known_splicesites	FALSE	canonical	1	6	junction_11	68.2283477596851	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTTTCACATCTCTTA	52	False	NA	NA	False	AATAAA	-24	NA	29595733	29511969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_29514584_29516137_29516247_29517143_29517311_29517572_29517791_29519446_29519550_29522316_29522457_29523265_29523489_29524131_29524254_29530537_29530713_29532823_29532983_29535818_29536203_29595415
transcript_47168.known	chr13	-	4317	5	FSM	ENSG00000122042.10	ENST00000380680.5	4317	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	13.7908484148003	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTATTTGCCTATT	9	True	NA	0	True	TTTAAA	-18	NA	29850617	29764370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_29767308_29767617_29767696_29772111_29772199_29777154_29777264_29849511
transcript_47176.known	chr13	-	1634	11	FSM	ENSG00000102781.14	ENST00000380617.7	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	5.11957029446808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAAAACAAGTTT	522	False	NA	-32	True	GATAAA	-19	NA	30307026	30208479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306939
transcript_47177.known	chr13	-	7618	11	FSM	ENSG00000102781.14	ENST00000380615.8	7618	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	4.02492235949962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTTCTTTGTGGTTCAT	-3	True	NA	-4	True	AATAAA	-22	NA	30307551	30202629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30307330
transcript_47184.known	chr13	-	5456	5	FSM	ENSG00000189403.15	ENST00000341423.10	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	2284	junction_1	3842.76621556659	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTTTTACTGGTTTT	-1	True	NA	-5	True	NA	NA	NA	30465936	30456703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_47187.known	chr13	-	821	5	FSM	ENSG00000189403.15	ENST00000326004.4	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4807.76923323073	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAAAGGGAGTTGTCA	-3	True	NA	NA	False	NA	NA	NA	30465938	30461495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30461689_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_47192.known	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_4	5239.33342014993	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-8	True	NA	-42	True	AATAAA	-24	NA	30464310	30459849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
transcript_47211.nic	chr13	-	647	4	ISM	ENSG00000189403.15	ENST00000326004.4	821	5	-28	1051	-28	-201	5prime_fragment	FALSE	canonical	3	9973	junction_3	932.441002006144	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAAAGGTAAGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	30465966	30462546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_30462713_30463206_30463353_30463530_30463695_30465795
transcript_47213.nic	chr13	-	402	3	ISM	ENSG00000189403.15	ENST00000326004.4	821	5	-28	1790	-28	25	5prime_fragment	FALSE	canonical	3	9973	junction_2	1119	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATGAAAACCTATATC	NA	False	NA	-26	True	NA	NA	NA	30465966	30463285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_30463353_30463530_30463695_30465795
transcript_47215.known	chr13	-	503	2	FSM	ENSG00000189403.15	ENST00000468384.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	9973	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCGGACAAGGCCCGTTA	-1	True	NA	2	True	NA	NA	NA	30465914	30463310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30463695_30465795
transcript_47216.known	chr13	+	4894	9	FSM	ENSG00000132952.12	ENST00000255304.9	4894	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	24.2535435555302	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	2	True	NA	NA	False	AATAAA	-28	NA	30617919	30660766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_30618057_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_47222.nnic	chr13	+	1976	6	Fusion	ENSG00000102802.10_ENSG00000236094.3	novel	641	3	NA	NA	-18	0	multi-exon	FALSE	canonical	2	2	junction_2	21.8412453857375	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTTTCCATTGTGGT	-4	True	NA	7	True	ATTAAA	-19	NA	30863473	30925572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr13_+_30863579_30882559_30882660_30917402_30917513_30921013_30921127_30921560_30921847_30924310
transcript_47225.nnic	chr13	+	649	5	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.9067059000926	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	-1	True	NA	NA	False	AATAAA	-18	NA	30863476	30883395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_30863579_30875273_30875367_30881952_30882005_30882559_30882660_30883093
transcript_47228.nnic	chr13	+	578	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.3762239633207	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	18	False	NA	NA	False	AATAAA	-18	NA	30863454	30883395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_30863579_30881952_30882005_30882559_30882660_30883093
transcript_47229.nnic	chr13	+	628	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	-16	29	-16	0	multi-exon	FALSE	canonical	3	64	junction_1	50	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863352	30883395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_30863579_30882559_30882660_30883093
transcript_47235.known	chr13	-	5244	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_9	98.5471274679274	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTGAGTCTACTT	-1	True	NA	51	True	NA	NA	NA	31161904	31134972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_47236.known	chr13	-	3570	18	FSM	ENSG00000120694.20	ENST00000630972.2	3570	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_17	219.165387614075	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	303	False	NA	-14	True	AATAAA	-27	NA	31162388	31136624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161981
transcript_47239.known	chr13	-	3480	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	230.307097969212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGATTTTGTCACT	764	False	NA	-17	True	AATAAA	-24	NA	31161927	31136627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_47242.nic	chr13	-	2813	17	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-126	3439	9	127	5prime_fragment	FALSE	canonical	3	717	junction_8	100.171727548246	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTGAGTGTTACTGTC	661	False	NA	18	True	ATTAAA	-8	NA	31162030	31138411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_47250.nic	chr13	-	2339	14	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-126	5300	9	-1734	5prime_fragment	FALSE	canonical	3	717	junction_5	104.297367312902	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGATGCTAAAAATGCA	661	False	NA	NA	False	GATAAA	-14	NA	31162030	31140272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_47258.nic	chr13	-	2147	12	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-126	8836	9	-5270	5prime_fragment	FALSE	canonical	3	717	junction_3	80.0732103032248	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGATGCTGACAAAGTG	661	False	NA	-18	True	AAGAAA	-7	NA	31162030	31143808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_47265.known	chr13	+	4215	15	FSM	ENSG00000187676.8	ENST00000343307.5	4215	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	9.98366011980351	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAACACTTTCTTACAAA	-13	True	NA	NA	False	AATAAA	-22	NA	31199974	31332276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_31200155_31215050_31215101_31222951_31222992_31229184_31229295_31247022_31247100_31247854_31247967_31260945_31261083_31269213_31269278_31274508_31274629_31276701_31276772_31284647_31284762_31286719_31286820_31317565_31317686_31323750_31323896_31329500
transcript_47281.nic	chr13	+	2046	10	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-34	66977	-31	0	5prime_fragment	FALSE	canonical	3	18	junction_1	5.51988548816632	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	-19	True	NA	NA	False	TATAAA	-11	NA	32315473	32333291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_47287.known	chr13	+	2011	10	FSM	ENSG00000139618.17	ENST00000530893.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.78030270429573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	12	True	NA	NA	False	TATAAA	-11	NA	32315504	32333291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_32315668_32316421_32316524_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_47288.known	chr13	-	5649	7	FSM	ENSG00000244754.9	ENST00000674349.1	5649	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	77.5207857430652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGAGGATATGAAAT	-1	True	NA	NA	False	NA	NA	NA	32538825	32514019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
transcript_4729.known	chr1	+	606	3	FSM	ENSG00000249087.8	ENST00000437367.4	898	3	286	6	12	0	multi-exon	FALSE	canonical	3	19	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	33	False	NA	17	True	AATAAA	-23	NA	23369249	23371783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23369514_23371138_23371210_23371512
transcript_47290.known	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	6.49923072370877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	4	True	NA	1	True	AATAAA	-16	NA	32538782	32510291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
transcript_47291.known	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	47.8664809652851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-16	True	NA	-16	True	AATAAA	-17	NA	32538802	32517620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
transcript_47295.known	chr13	-	2701	6	FSM	ENSG00000244754.9	ENST00000674465.1	2701	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	82.5120597246245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-1	True	NA	-13	True	ATTAAA	-10	NA	32538825	32516900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538777
transcript_47299.known	chr13	-	2626	5	FSM	ENSG00000244754.9	ENST00000674480.1	2626	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	96.4633997949481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTTCTTCATATAAA	9	False	NA	-48	True	NA	NA	NA	32538815	32516935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32535768_32537028_32538682
transcript_47302.known	chr13	-	2181	3	FSM	ENSG00000244754.9	ENST00000674433.1	2181	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	-1	True	NA	NA	False	AAAAAG	-30	NA	32538825	32526818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32527533_32535768_32537028_32538617
transcript_47303.known	chr13	-	2055	3	FSM	ENSG00000244754.9	ENST00000674494.1	2055	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	57	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGGACTTTAAAAAAA	9	False	NA	NA	False	NA	NA	NA	32538815	32526869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32527533_32535768_32537028_32538682
transcript_47304.known	chr13	-	3691	2	FSM	ENSG00000244754.9	ENST00000674369.1	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	32538825	32533544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32537028_32538617
transcript_47307.known	chr13	-	3626	2	FSM	ENSG00000244754.9	ENST00000674276.1	3626	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	32538825	32533544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32537028_32538682
transcript_47308.known	chr13	-	2999	5	FSM	ENSG00000139597.18	ENST00000380130.7	2999	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	5.31507290636732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTATGATGCAGTATGT	-4	True	NA	NA	False	AATAAA	-22	NA	32428130	32400722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32403201_32404320_32404398_32407249_32407339_32407644_32407773_32427903
transcript_47310.known	chr13	-	1145	2	FSM	ENSG00000139597.18	ENST00000464470.1	1145	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTCTTGTCTCCCAAA	286	False	NA	-3	True	AATAAA	-18	NA	32428014	32424921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32425956_32427903
transcript_47311.known	chr13	+	7472	35	FSM	ENSG00000083642.19	ENST00000315596.15	7472	35	0	0	0	0	multi-exon	TRUE	canonical	2	160	junction_31	30.7740959688333	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	-10	True	NA	NA	False	AATAAA	-13	NA	32586451	32778019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764595_32770120_32770561_32770653_32770762_32773188_32773325_32775016
transcript_4732.known	chr1	-	3788	3	FSM	ENSG00000125945.15	ENST00000374608.3	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTGAGCCACTATGG	2183	False	NA	-1	True	AATAAA	-19	NA	23368386	23359974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23363222_23367041_23367169_23367972
transcript_47320.known	chr13	-	5915	14	FSM	ENSG00000133121.21	ENST00000336934.10	5915	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1.83328850581738	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGATTTTCATGCT	-28	True	NA	NA	False	AATAAA	-37	NA	33285755	33103136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_33105711_33106757_33106935_33109872_33110091_33110685_33110908_33111777_33111893_33112720_33112932_33118064_33118264_33126080_33126241_33127372_33127547_33128928_33130290_33142309_33142374_33165336_33165419_33167550_33167623_33285469
transcript_47323.known	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_8	46.1410879802373	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	-5	True	NA	21	True	AATAAA	-18	NA	33818148	33837500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
transcript_47324.known	chr13	+	1461	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	159.485060036983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTCTGCTATTTTCT	-5	True	NA	28	True	AATAAA	-27	NA	33818068	33966558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
transcript_4733.known	chr1	+	997	2	FSM	ENSG00000249087.8	ENST00000454117.2	1266	2	269	0	-5	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGATGTGTGTAAT	1	True	NA	73	True	TTTAAA	-2	NA	23369217	23371839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23369514_23371138
transcript_47333.known	chr13	-	8394	17	FSM	ENSG00000133083.15	ENST00000360631.8	8394	17	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_13	26.8627879230731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTATTTTATCCTTCAAC	-1	True	NA	NA	False	AATAAA	-15	NA	36131382	35768651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
transcript_47335.known	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.8273286751227	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	120	False	NA	-4	True	AATAAA	-14	NA	35855642	35771338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
transcript_4734.known	chr1	+	461	2	FSM	ENSG00000249087.8	ENST00000518821.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAATGAGTACCTACTG	21	True	NA	NA	False	NA	NA	NA	23369237	23371512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23369325_23371138
transcript_47341.known	chr13	-	2101	7	FSM	ENSG00000133083.15	ENST00000379892.4	2101	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	5.5502752684489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATACATAATTTTTTAA	-8	True	NA	NA	False	NA	NA	NA	36131306	35849922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35850777_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
transcript_47342.known	chr13	-	5247	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTCAGTGAGTTTC	NA	False	NA	-1	True	AATAAA	-15	NA	35855784	35845899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35850777_35854498_35854594_35855509
transcript_47345.nnic	chr13	-	2673	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-41	574	combination_of_known_splicesites	FALSE	canonical	3	122	junction_5	50.9629931093795	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTGTAATCCATTTT	-58	True	NA	-15	True	AATAAA	-18	NA	36297883	36168219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_47346.nnic	chr13	-	2632	15	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-41	574	combination_of_known_splicesites	FALSE	canonical	3	57	junction_13	52.9786730290441	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTGTAATCCATTTT	-58	True	NA	-15	True	AATAAA	-18	NA	36297883	36168219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_47348.known	chr13	-	837	8	FSM	ENSG00000242715.8	ENST00000503173.5	837	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	80.511629277885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	76	False	NA	-82	True	NA	NA	NA	36297749	36227119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_47349.known	chr13	-	1158	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	71.4437126809116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGTCCATTTTAAG	11	True	NA	NA	False	TTTAAA	-22	NA	36297814	36230774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_4735.known	chr1	-	1719	11	FSM	ENSG00000204219.11	ENST00000450454.7	1719	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.06594194335118	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATACACCATTTGGCT	-19	True	NA	NA	False	NA	NA	NA	23424748	23380908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23381475_23384345_23384418_23387272_23387420_23393878_23394034_23397544_23397602_23397791_23397956_23408663_23408727_23417248_23417391_23417903_23418010_23419076_23419140_23424564
transcript_47351.known	chr13	-	753	7	FSM	ENSG00000242715.8	ENST00000491049.6	753	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	101.918267907836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	76	False	NA	-82	True	NA	NA	NA	36297749	36227119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_47353.known	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	69.6132171358284	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-7	True	NA	-13	True	AATAAA	-17	NA	36297832	36280056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_47355.nic	chr13	-	1910	4	NIC	ENSG00000242715.8	novel	887	3	NA	NA	-43	893	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	41.3145118437685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTATCTCTCTTTTAT	-58	True	NA	NA	False	ATTAAA	-19	NA	36297883	36281934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36283407_36283591_36283703_36295777_36295858_36297636
transcript_47358.known	chr13	-	3018	10	FSM	ENSG00000133104.14	ENST00000494062.2	3018	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	259.586756115595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	7	True	NA	-12	True	ATTAAA	-17	NA	36346493	36303601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346313
transcript_47359.nnic	chr13	-	3044	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_9	229.012587933718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	36346787	36303601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_47361.known	chr13	-	4944	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_8	70.8025423272357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTTTTCTTGACCT	NA	False	NA	-2	True	TATAAA	-19	NA	36346797	36301639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_47365.known	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	209.530278241594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-19	True	NA	0	True	TATAAA	-21	NA	36346394	36301637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_47377.known	chr13	+	508	4	FSM	ENSG00000120664.11	ENST00000379848.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTCCAGCCAATATAT	129	False	NA	NA	False	AATAAA	-20	NA	36346431	36368410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36346508_36365499_36365605_36365729_36365844_36368197
transcript_47379.known	chr13	-	796	2	FSM	ENSG00000133104.14	ENST00000494703.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTATAGGAATCATTCT	-18	True	NA	NA	False	NA	NA	NA	36346777	36335232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36335833_36346581
transcript_47380.known	chr13	+	1699	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.06664701255129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	28	False	NA	3	True	AATAAA	-16	NA	36432522	36442870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_47381.known	chr13	+	1730	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.75302360373035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	0	True	NA	3	True	AATAAA	-16	NA	36432494	36442870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_47382.known	chr13	+	3099	2	FSM	ENSG00000180440.4	ENST00000315190.4	3099	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCTTTGATTCTTT	-16	True	NA	11	True	AATAAA	-20	NA	36674019	36697839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36674185_36694905
transcript_47383.known	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	-29	True	NA	15	True	ATTAAA	-21	NA	36819221	36829104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36819958_36825427_36825536_36827642
transcript_47386.known	chr13	-	5558	7	FSM	ENSG00000120693.14	ENST00000379826.5	5558	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.06718737290547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTGGCTCATTTTTC	-2	True	NA	-4	True	AATAAA	-17	NA	36920238	36844830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36848820_36853418_36853676_36865536_36865759_36867272_36867384_36872657_36872916_36879277_36879876_36920115
transcript_47389.known	chr13	-	2208	6	FSM	ENSG00000120693.14	ENST00000350148.10	2208	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.28035085019828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAAAACTGTGA	-2	True	NA	NA	False	TTTAAA	-14	NA	36920238	36848069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36848820_36853418_36853676_36865536_36865759_36872657_36872916_36879277_36879876_36920115
transcript_47394.known	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	129.513205504304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	28	False	37059716	-24	True	AATACA	-25	NA	37059688	37009311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_47405.known	chr13	-	2625	25	FSM	ENSG00000102710.21	ENST00000464744.5	2625	25	0	0	0	0	multi-exon	FALSE	canonical	2	76	junction_24	145.033688615209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTTTCTACTTTTTG	1	True	NA	-28	True	TTTAAA	-25	NA	37059432	37009616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059194
transcript_47407.known	chr13	-	2843	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_20	109.382737821529	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTGGCTGTTTAT	3	False	NA	-28	True	AATACA	-21	NA	37059713	37009315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_47408.known	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	108.036251310485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	5	True	NA	96	True	AATAAA	-24	NA	37059649	37009492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_47412.known	chr13	-	2681	25	FSM	ENSG00000102710.21	ENST00000356185.7	2681	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_20	139.417812308503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGGTTTGCCTAAG	4	True	NA	95	True	AATAAA	-23	NA	37059650	37009493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059479
transcript_47428.known	chr13	+	1166	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	0	0	0	0	multi-exon	FALSE	canonical	1	567	junction_10	396.674186203237	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	-2	True	NA	19	True	ATTAAA	-24	NA	37000785	37009614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_47435.nic	chr13	+	1932	11	FSM	ENSG00000120699.14	ENST00000692143.1	3630	11	4	1694	0	0	multi-exon	FALSE	canonical	1	38	junction_1	623.007351481505	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	-2	True	NA	43	True	AATAAA	-24	NA	37000785	37009401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_37001802_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_47442.known	chr13	+	2423	10	FSM	ENSG00000120699.14	ENST00000490537.6	2423	10	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_4	627.245477376194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	-1	True	NA	43	True	AATAAA	-24	NA	37000786	37009401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_47446.known	chr13	-	1219	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	32.9706191691188	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-10	True	NA	1	True	TATAAA	-33	NA	36999340	36949737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_47447.known	chr13	-	1057	10	FSM	ENSG00000120697.10	ENST00000681893.1	1057	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	124.125384636307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	338	False	NA	-12	True	AATAAA	-15	NA	37000741	36949838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_37000696
transcript_47449.nic	chr13	+	536	9	ISM	ENSG00000120699.14	ENST00000686729.1	1445	10	-4	1464	0	-704	5prime_fragment	FALSE	canonical	3	1313	junction_1	187.808413017096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACTGCTTTAGCAG	-6	True	NA	NA	False	TATAAA	-1	NA	37000781	37008081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056
transcript_47450.known	chr13	-	1417	9	FSM	ENSG00000120697.10	ENST00000681553.1	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	34.8487804664668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTTCATTTGAAA	18	True	NA	-74	True	NA	NA	NA	36999312	36949900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995597_36999234
transcript_47451.known	chr13	-	1064	9	FSM	ENSG00000120697.10	ENST00000681043.1	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	133.368849436441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-12	True	NA	-21	True	AATAAA	-6	NA	36999342	36949847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
transcript_47452.known	chr13	-	919	9	FSM	ENSG00000120697.10	ENST00000680488.1	919	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	132.305930989506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGCCTTTTGATA	30	True	NA	-19	True	AATAAA	-8	NA	36999300	36949845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_47454.known	chr13	-	897	8	FSM	ENSG00000120697.10	ENST00000681208.1	897	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	142.718218164039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-10	True	NA	-21	True	AATAAA	-6	NA	36999340	36949847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_47455.known	chr13	-	1110	10	FSM	ENSG00000120697.10	ENST00000680795.1	1110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	168.666959449314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTCTGCCTTTTG	6	True	NA	-22	True	AATAAA	-5	NA	36999324	36949848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995426_36995617_36999234
transcript_47456.known	chr13	-	1384	11	FSM	ENSG00000120697.10	ENST00000681016.1	1384	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	162.334839144282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTGATAATTTT	827	False	NA	-14	True	AATAAA	-13	NA	37000252	36949840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999591_36999645_36999931
transcript_47457.known	chr13	-	7979	11	FSM	ENSG00000133107.15	ENST00000379705.8	7979	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	23.249946236497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAATCTCCTAATGGAC	6	True	NA	NA	False	ATTAAA	-20	NA	37869772	37632062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
transcript_47460.known	chr13	-	2912	10	FSM	ENSG00000133107.15	ENST00000338947.9	2912	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	36.411231478457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACCCACAGAAACATTT	10	False	NA	-12	True	AATAAA	-31	NA	37869802	37636640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37782955_37783361_37869594
transcript_47464.nic	chr13	-	2335	5	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-623	37260	-623	-10697	5prime_fragment	FALSE	canonical	3	96	junction_1	24.8042335096249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTCGTATTCATCAGCT	NA	False	NA	NA	False	AATAAA	-20	NA	37870425	37674124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
transcript_47466.nic	chr13	-	2143	4	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-623	55083	-623	-28520	5prime_fragment	FALSE	canonical	3	101	junction_1	22.5437845585479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGTTGCTCAGAAAATAT	NA	False	NA	0	True	AATAAA	-21	NA	37870425	37691947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_37692336_37745936_37746456_37782955_37783361_37869594
transcript_47469.known	chr13	+	3168	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_5	56.1519367430902	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAATTCTGATTTAT	-9	True	NA	NA	False	ATTAAA	-22	NA	38349850	38363619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_4747.nic	chr1	-	4180	25	NIC	ENSG00000088280.20	novel	4051	25	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	62.1570032703923	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	NA	False	NA	-7	True	AATAAA	-18	NA	23484245	23428562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433361_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
transcript_47473.nic	chr13	+	1781	5	ISM	ENSG00000120686.12	ENST00000239878.9	3168	6	-11	2775	-9	-281	intron_retention	FALSE	canonical	3	757	junction_1	31.2519999360041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATCAGGCATTTAACA	-20	True	NA	30	True	AATAAA	-27	NA	38349839	38360844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300
transcript_47475.known	chr13	-	1886	7	FSM	ENSG00000133115.12	ENST00000379631.9	1886	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGGAGGTTATTTCG	-1	True	NA	NA	False	TATAAA	-17	NA	38990831	38965924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_38967050_38968399_38968535_38970184_38970389_38972511_38972595_38976539_38976613_38976693_38976798_38990669
transcript_47480.known	chr13	-	5182	13	FSM	ENSG00000120685.20	ENST00000352251.8	5182	13	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_12	48.0730780513723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTTTTTATATATG	-9	True	NA	-13	True	CATAAA	-17	NA	39038089	39009864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
transcript_47486.known	chr13	-	5102	12	FSM	ENSG00000120685.20	ENST00000625998.2	5102	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	156.606840461516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTTTTATATAT	4	True	NA	-14	True	CATAAA	-16	NA	39038076	39009865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39037197
transcript_47495.known	chr13	+	3411	7	FSM	ENSG00000188811.14	ENST00000379600.8	3411	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	22.9177272481855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	50	True	NA	30	True	ATTAAA	-23	NA	39038455	39050109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_47497.known	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	39.9529723550076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	-15	True	NA	30	True	ATTAAA	-23	NA	39038390	39050109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
transcript_47499.nic	chr13	+	2078	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-118	4830	27	815	5prime_fragment	FALSE	canonical	3	74	junction_3	23.3813494050279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTCCTGAGCTTGGGTG	12	True	NA	3	True	ATTAAA	-12	NA	39038337	39045279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_4750.nic	chr1	-	4238	25	NIC	ENSG00000088280.20	novel	4051	25	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	60.2392798208389	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	-32	True	NA	-7	True	AATAAA	-18	NA	23484238	23428562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433424_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435722_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
transcript_47501.nic	chr13	+	1014	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-53	10071	27	-1779	5prime_fragment	FALSE	canonical	3	114	junction_1	11.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCAGGCGTGGTGGCGG	12	True	NA	NA	False	AATACA	-18	NA	39038337	39040038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_47502.nic	chr13	+	1188	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-53	9897	27	-1605	5prime_fragment	FALSE	canonical	3	114	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACAAGGAGCCTGTTAA	12	True	NA	NA	False	AAAAAG	-8	NA	39038337	39040212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_47503.nic	chr13	+	1289	2	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-53	10071	27	-1779	intron_retention	FALSE	canonical	3	114	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCAGGCGTGGTGGCGG	12	True	NA	NA	False	AATACA	-18	NA	39038337	39040038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_39038724_39039135
transcript_47504.known	chr13	+	3298	7	FSM	ENSG00000188811.14	ENST00000470258.5	3298	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	39.9391898877392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	-15	True	NA	30	True	ATTAAA	-23	NA	39038310	39050109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_39038466_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_47505.known	chr13	+	3574	19	FSM	ENSG00000133103.17	ENST00000455146.8	3574	19	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	17.2634810446149	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGCAGCAATTATTGC	-24	True	NA	13	True	AATAAA	-14	NA	39655661	39752628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
transcript_47509.known	chr13	-	1486	7	FSM	ENSG00000102738.8	ENST00000323563.8	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_6	24.3629956194955	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTTTCACTCGGT	-13	True	NA	NA	False	AATACA	-21	NA	40771190	40729127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_40729602_40749137_40749282_40754018_40754093_40756872_40757014_40758947_40759107_40766745_40767034_40770984
transcript_47513.nic	chr13	-	820	4	ISM	ENSG00000102738.8	ENST00000323563.8	1486	7	-27	27746	-27	2128	5prime_fragment	FALSE	canonical	3	566	junction_3	26.4112770527204	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCAGGCTTTGTAATCT	NA	False	NA	NA	False	NA	NA	NA	40771217	40756873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_40757014_40758947_40759107_40766745_40767034_40770984
transcript_47517.nnic	chr13	+	1742	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	70	-951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.4104256073438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTGTACTTCACTATGC	21	False	NA	NA	False	AAAAAG	-10	NA	40789481	40811509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810195_40811451
transcript_47518.nnic	chr13	+	2780	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.4104256073438	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTCTGATGAATTT	NA	False	NA	13	True	ATTAAA	-13	NA	40789392	40812458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810195_40811451
transcript_47519.nnic	chr13	+	2782	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-19	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.4104256073438	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATATTTGAGTCTGATGA	NA	False	NA	9	True	ATTAAA	-9	NA	40789392	40812454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810210_40811460
transcript_47520.known	chr13	+	3821	7	FSM	ENSG00000102743.15	ENST00000338625.9	3821	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	20.387904911164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	0	True	NA	15	True	ATTAAA	-15	NA	40789610	40812460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542
transcript_47524.nnic	chr13	+	2610	7	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	77.6909833178142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTCTGATGAATTT	NA	False	NA	13	True	ATTAAA	-13	NA	40789392	40812458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40808437_40808597_40809542_40810195_40811451
transcript_47528.nic	chr13	-	1356	5	NIC	ENSG00000120690.16	novel	3678	9	NA	NA	3	-16368	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	8.52936105461599	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGTTACTTTGTT	244	False	NA	NA	False	NA	NA	NA	41061437	40949806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41060837
transcript_47529.known	chr13	+	2388	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_8	26.1023626006025	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	-25	True	NA	NA	False	ATTAAA	-19	NA	41061508	41084006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
transcript_47533.nic	chr13	+	550	5	ISM	ENSG00000120688.9	ENST00000379487.5	2388	10	-22	15345	-22	-15345	5prime_fragment	FALSE	canonical	3	265	junction_4	19.9874960913067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTCAAAGGGCAGATG	-47	True	NA	NA	False	AAGAAA	-27	NA	41061486	41068661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560
transcript_47534.nic	chr13	+	329	3	ISM	ENSG00000120688.9	ENST00000379487.5	2388	10	-22	18924	-22	-18924	5prime_fragment	FALSE	canonical	3	285	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTTTATTTGCTA	-47	True	NA	NA	False	AAAAAG	-15	NA	41061486	41065082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_41061676_41062643_41062717_41065015
transcript_47545.known	chr13	-	2184	10	FSM	ENSG00000120662.16	ENST00000379480.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	25.2195299591016	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTTTGACTTCTATT	-6	True	NA	-17	True	TATAAA	-25	NA	41263576	41216368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_4755.known	chr1	-	4051	25	FSM	ENSG00000088280.20	ENST00000336689.8	4051	25	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_8	26.5295629125949	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	27	True	NA	-7	True	AATAAA	-18	NA	23484179	23428562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433424_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
transcript_47553.known	chr13	+	4285	20	FSM	ENSG00000172766.19	ENST00000379406.8	4285	20	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_13	12.3045382704863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	1	True	NA	12	True	AATAAA	-18	NA	41311266	41377030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
transcript_47555.nic	chr13	+	2152	15	ISM	ENSG00000172766.19	ENST00000379406.8	4285	20	-22	7826	-22	0	5prime_fragment	FALSE	canonical	3	106	junction_13	10.9068411409294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAGAAAAAAAGAGATG	-21	True	NA	102	True	AAGAAA	-35	NA	41311244	41369204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089
transcript_4756.nic	chr1	-	4102	25	NIC	ENSG00000088280.20	novel	4051	25	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_24	63.7967149102	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	NA	False	NA	-7	True	AATAAA	-18	NA	23484261	23428562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433424_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484035
transcript_47560.known	chr13	+	958	5	FSM	ENSG00000102760.13	ENST00000379359.4	958	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	2.54950975679639	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTCCTTTTCTTTTT	-2	True	NA	NA	False	AATAAA	-13	NA	41457549	41470871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_41457757_41458284_41458471_41466822_41466931_41468775_41468839_41470477
transcript_47563.nic	chr13	+	1908	8	ISM	ENSG00000023516.9	ENST00000025301.4	9915	13	-106	22889	-106	-22889	5prime_fragment	FALSE	canonical	1	1	junction_5	4.70345075232981	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTAATGATTAAAGATAG	0	True	NA	NA	False	AATAAA	-13	NA	42272045	42300372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_42272229_42285985_42286036_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362
transcript_47564.nnic	chr13	+	1965	7	NNC	ENSG00000023516.9	novel	9915	13	NA	NA	-677	-22889	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	4.6785562825394	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTAATGATTAAAGATAG	-19	True	NA	NA	False	AATAAA	-13	NA	42271474	42300372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_42271765_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362
transcript_47566.known	chr13	+	2201	5	FSM	ENSG00000120659.15	ENST00000398795.7	2201	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	12.2065556157337	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	0	True	NA	12	True	AATAAA	-18	NA	42574151	42608013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_42574523_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_47568.nnic	chr13	+	2048	5	NNC	ENSG00000120659.15	novel	1520	7	NA	NA	699	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	28.613807855649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	851	False	NA	12	True	AATAAA	-18	NA	42575002	42608013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_42575221_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_47570.known	chr13	-	957	12	FSM	ENSG00000133106.15	ENST00000398762.7	957	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	69.3200744898094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATTGACTCCTATCT	76	False	NA	NA	False	NA	NA	NA	42992165	42888493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42919299_42919333_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_47572.known	chr13	-	3106	11	FSM	ENSG00000133106.15	ENST00000313624.12	3106	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	23.7705700394416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTTCCTTTGTGGTT	0	True	NA	-2	True	AATAAA	-41	NA	42992241	42886387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_47577.nic	chr13	-	584	4	ISM	ENSG00000133106.15	ENST00000398762.7	957	12	-180	75573	-74	-765	5prime_fragment	FALSE	canonical	3	200	junction_3	9.89949493661167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGAATTCATCTCTTTT	NA	False	NA	NA	False	AATACA	-8	NA	42992345	42964066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_42964140_42969093_42969178_42970611_42970671_42991977
transcript_47585.known	chr13	+	7459	6	FSM	ENSG00000120675.6	ENST00000379221.4	7459	6	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	86.1059812092052	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACTCAATTTTTCTGT	-23	True	NA	NA	False	AATAAA	-22	NA	43023585	43114213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
transcript_47589.known	chr13	+	924	4	FSM	ENSG00000120675.6	ENST00000474320.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	32.4995726467629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAAAACAGGCAA	59	False	NA	NA	False	AAAACA	-9	NA	43023202	43078877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611
transcript_47594.known	chr13	+	4028	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	6.26276474268531	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	-2	True	NA	7	True	AATAAA	-20	NA	43879903	43893932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
transcript_47601.known	chr13	+	962	4	FSM	ENSG00000151778.11	ENST00000493476.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATACCATGTGTGGGTTA	49	False	NA	9	True	AATAAA	-15	NA	44373881	44397710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44374110_44379640_44379714_44390356_44390579_44397271
transcript_47602.known	chr13	+	802	3	FSM	ENSG00000151778.11	ENST00000379179.8	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTGTGGGTTACAGT	-9	True	NA	13	True	AATAAA	-19	NA	44373823	44397714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44374110_44379640_44379714_44397271
transcript_47604.known	chr13	-	3135	3	FSM	ENSG00000102804.15	ENST00000261489.6	3135	3	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	196	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	5	True	NA	NA	False	ATTAAA	-16	NA	44436845	44432142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_44434884_44436043_44436096_44436503
transcript_47605.known	chr13	-	2872	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	518.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	-20	True	NA	NA	False	ATTAAA	-16	NA	44437254	44432142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_44434884_44436043_44436096_44437175
transcript_47606.known	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	16.6533279957291	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-11	True	NA	-1	True	ATTAAA	-15	NA	44989471	44939248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
transcript_47608.nic	chr13	-	551	2	ISM	ENSG00000083635.8	ENST00000379161.5	3480	10	-22	42824	-22	-42824	5prime_fragment	FALSE	canonical	3	152	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGAAAGATGTTCTT	NA	False	NA	NA	False	AAAACA	-10	NA	44989493	44982072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_44982155_44989024
transcript_47612.nnic	chr13	+	3528	10	NNC	ENSG00000133114.18	novel	4294	10	NA	NA	-2	-1317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	34.7513211401762	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAGCCCTGATCTAAG	-19	True	NA	NA	False	AAAAAG	-13	NA	44989535	45032285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45030431_45031091
transcript_47615.nic	chr13	+	2207	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-84	3299	-2	-2	5prime_fragment	FALSE	canonical	3	46	junction_8	19.0718214914045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTCTTGCAGATTAA	-19	True	NA	24	True	AATAAA	-17	NA	44989535	45030303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_47617.known	chr13	+	3410	8	FSM	ENSG00000133114.18	ENST00000361121.6	3410	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.0905889706014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	9	True	NA	26	True	AATAAA	-19	NA	44989563	45030305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44989743_45004310_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_47624.known	chr13	+	3442	8	FSM	ENSG00000133114.18	ENST00000379151.9	3442	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	5.44733598998218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	-17	True	NA	26	True	AATAAA	-19	NA	44989537	45030305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_47625.known	chr13	+	899	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTCATGCCTTTCTTT	NA	False	NA	7	True	AATAAA	-21	NA	44989528	44990427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44989500_44990400
transcript_47629.known	chr13	+	2228	8	FSM	ENSG00000188342.12	ENST00000340473.8	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	21.4998813475606	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCCATTCCCCACTCC	5	True	NA	9	True	AATAAA	-17	NA	45120509	45284893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
transcript_47632.nic	chr13	+	705	7	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-49	17637	-49	-77	5prime_fragment	FALSE	canonical	3	511	junction_2	18.5868830690415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACGGAAAGCGAGCTCG	-44	True	NA	22	True	AAAAAG	-4	NA	45120460	45267256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232
transcript_47633.nic	chr13	+	681	6	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-49	31923	-49	-14363	5prime_fragment	FALSE	canonical	3	511	junction_2	19.1415777824086	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTTCTGCTTGTCTC	-44	True	NA	NA	False	AATACA	-3	NA	45120460	45252970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870
transcript_47636.known	chr13	-	4548	6	FSM	ENSG00000133112.17	ENST00000530705.6	4548	6	0	0	0	0	multi-exon	FALSE	canonical	3	2832	junction_4	404.823615911918	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCATCCTTAAGGTTAT	0	True	NA	NA	False	AATAAA	-30	NA	45341183	45333470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
transcript_47638.known	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	1505.11843387821	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	1	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
transcript_47639.known	chr13	-	1008	5	FSM	ENSG00000133112.17	ENST00000309246.9	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	2832	junction_3	351.617956737138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACTGCACTCTATCCT	127	False	NA	NA	False	NA	NA	NA	45341086	45338184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
transcript_47641.known	chr13	-	764	6	FSM	ENSG00000133112.17	ENST00000379060.8	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1387.9091324723	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGCATTTAAACTC	91	False	NA	6	True	AAGAAA	-25	NA	45341122	45337197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341037
transcript_47646.known	chr13	-	3663	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	4.2889464590264	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGGTTATTTCAGA	-10	True	NA	98	True	AATAAA	-26	NA	45418373	45393315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
transcript_47652.known	chr13	+	4555	23	FSM	ENSG00000136152.15	ENST00000349995.10	4555	23	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	10.8917475773751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTCAGACTCACATGC	-8	True	NA	95	True	ATTAAA	-17	NA	45464938	45536701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_45465211_45476200_45476348_45479004_45479067_45480124_45480291_45481229_45481305_45482380_45482474_45483229_45483356_45486494_45486576_45490914_45490959_45491411_45491539_45492158_45492251_45493346_45493487_45496151_45496313_45503243_45503350_45509691_45509817_45511764_45511855_45516142_45516264_45518761_45518851_45518959_45519095_45524975_45525052_45529790_45529919_45530681_45530781_45534701
transcript_47658.known	chr13	+	531	2	FSM	ENSG00000136152.15	ENST00000617325.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCCATGGGGGTCTT	13	False	NA	NA	False	NA	NA	NA	45464897	45465658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_45465211_45465440
transcript_47666.known	chr13	-	8024	19	FSM	ENSG00000123200.17	ENST00000679008.1	8024	19	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_18	43.7051357266957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-8	True	NA	-4	True	AATAAA	-18	NA	46052746	45954464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_47676.nic	chr13	-	2354	12	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-26	13318	-26	-13318	5prime_fragment	FALSE	canonical	3	49	junction_11	50.9533898174037	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAGAGAGAGAGGGAG	5600	False	NA	6	True	AAAAAG	-16	NA	46052785	45975493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_47685.nic	chr13	-	1282	9	NIC	ENSG00000123200.17	novel	8024	19	NA	NA	3	-2058	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	82.4506481175254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGGATAGAAGAAAAAACA	-18	True	NA	NA	False	AGTAAA	-3	NA	46052756	46003220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46051931_46051990_46052403
transcript_47698.nic	chr13	-	468	5	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-26	58350	-26	-10376	5prime_fragment	FALSE	canonical	3	49	junction_4	81.317279836453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACATAAAAATCACTA	5600	False	NA	5	True	NA	NA	NA	46052785	46020525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_47699.known	chr13	-	8018	19	FSM	ENSG00000123200.17	ENST00000242848.8	8018	19	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_18	55.4499273619402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-8	True	NA	-4	True	AATAAA	-18	NA	46052746	45954464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965430_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045514_46052403
transcript_47700.known	chr13	-	11050	15	FSM	ENSG00000102445.20	ENST00000429979.6	11050	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	5.40974177964614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAAGCTCCCCTGCCTA	-7	True	NA	NA	False	TATAAA	-25	NA	46387252	46334680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46377889_46378006_46387133
transcript_47702.nic	chr13	-	2900	14	NIC	ENSG00000102445.20	novel	11050	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	5.11986501301346	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	2670	False	NA	-9	True	NA	NA	NA	46387501	46342963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46387133
transcript_47703.known	chr13	-	2731	13	FSM	ENSG00000102445.20	ENST00000378787.7	2731	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.58836829188814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	2685	False	NA	-9	True	NA	NA	NA	46387486	46342963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46343498_46344740_46344832_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46387133
transcript_47704.known	chr13	-	3206	13	FSM	ENSG00000102445.20	ENST00000378797.6	3206	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	6.43072054024016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	2671	False	NA	NA	False	AATAAA	-19	NA	46387500	46341999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46387133
transcript_47707.known	chr13	+	4710	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_18	6.98521366004958	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	-5	True	NA	7	True	ATTAAA	-18	NA	46553167	46753040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
transcript_47714.known	chr13	-	1079	11	FSM	ENSG00000139684.15	ENST00000378697.5	1079	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	197.997499984217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAACATTGGATTTTAT	19	True	NA	-97	True	TATAAA	-44	NA	46797133	46771334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46790596_46790662_46791345_46791421_46793396_46793445_46797104
transcript_47715.known	chr13	-	1121	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	143.297239210782	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGATTTTAAAAGTTAT	-9	True	NA	-18	True	AATAAA	-14	NA	46797161	46771255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_47720.known	chr13	-	2201	12	FSM	ENSG00000136143.16	ENST00000643023.1	2201	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	359.353275843569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTGGGTTCATGGCT	3395	False	NA	-19	True	AATAAA	-11	NA	48001305	47942660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47965577_47965641_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_47723.known	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_6	74.1012820401914	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	10	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_47724.known	chr13	-	2321	11	FSM	ENSG00000136143.16	ENST00000646804.1	2321	11	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_10	283.219985170538	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTTAAGTTAATAAAAA	22	True	NA	14	True	AATAAA	-40	NA	48037942	47942688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48037605
transcript_47727.nic	chr13	-	1961	10	NIC	ENSG00000136143.16	novel	2201	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_9	288.957940465433	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTGGGTTCATGGCT	8	True	NA	-19	True	AATAAA	-11	NA	48001309	47942660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_48001179
transcript_47734.known	chr13	-	1445	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_2	34.2669260690571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGCAACTTTTAAT	10	True	NA	NA	False	ATTAAA	-22	NA	48001273	47987633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
transcript_47735.known	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_2	34.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	-5	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48037905_48040919_48041117_48045659
transcript_47737.nic	chr13	+	967	2	ISM	ENSG00000136159.4	ENST00000258662.3	1938	3	-208	5722	-208	-5722	5prime_fragment	FALSE	canonical	3	645	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGTAGTCTGAAGT	0	True	NA	5	True	AATAAA	-14	NA	48037517	48041499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_48037905_48040919
transcript_47744.known	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_6	57.8983784075359	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	8	True	NA	NA	False	NA	NA	NA	48095104	48075723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
transcript_47745.known	chr13	-	931	7	FSM	ENSG00000136146.15	ENST00000378586.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_6	315.445936554727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATAGTTTTAGTTTTA	NA	False	NA	NA	False	ATTAAA	-35	NA	48095131	48076967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
transcript_47751.known	chr13	+	10089	6	FSM	ENSG00000136156.15	ENST00000647800.2	10089	6	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_5	80.5098751706895	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTTTATTATTTTTG	-3	True	NA	NA	False	AATAAA	-19	NA	48233205	48270357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48233478_48253807_48253937_48256176_48256384_48258125_48258237_48258796_48258948_48261138
transcript_47755.nic	chr13	+	586	3	ISM	ENSG00000136156.15	ENST00000647800.2	10089	6	-78	14074	-75	-2595	5prime_fragment	FALSE	canonical	3	1361	junction_1	21.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATCTTTGAAGAAG	368	False	NA	NA	False	AAGAAA	-2	NA	48233127	48256283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_48233478_48253807_48253937_48256176
transcript_47756.known	chr13	+	4768	27	FSM	ENSG00000139687.16	ENST00000267163.6	4768	27	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_19	10.6623820290095	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGATGTTGTGTTCTT	18	True	NA	12	True	AATAAA	-21	NA	48303750	48481890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48304050_48307279_48307407_48342598_48342715_48345079_48345200_48347824_48347864_48348955_48349024_48360016_48360128_48362814_48362958_48364893_48364972_48367493_48367604_48368526_48368605_48373404_48373493_48376917_48377035_48379593_48379651_48380052_48380085_48380164_48380242_48381246_48381444_48452992_48453112_48456203_48456350_48459687_48459834_48463730_48463836_48464997_48465112_48465204_48465369_48473359_48473391_48476700_48476844_48477354_48477405_48479997
transcript_47759.known	chr13	-	3075	15	FSM	ENSG00000136161.13	ENST00000344532.8	3075	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	8.40917865872082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	1	True	NA	NA	False	AATAAA	-24	NA	48533080	48488962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48522307_48522404_48524658_48524758_48533027
transcript_47761.known	chr13	-	3179	14	FSM	ENSG00000136161.13	ENST00000430805.6	3179	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	12.3939286529987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	2639	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48522307_48522404_48524658_48524758_48533027
transcript_47764.known	chr13	-	2984	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	5.7265511810995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	2639	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
transcript_47765.known	chr13	+	6286	26	FSM	ENSG00000102531.16	ENST00000492622.6	6286	26	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	21.8668699177546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTGATTTTGTGCAAC	5	True	NA	14	True	AATAAA	-19	NA	48975911	49209779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_47766.known	chr13	+	2037	8	FSM	ENSG00000102531.16	ENST00000378383.5	2037	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	21.800580407926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGAAGTTGATTATTCT	25	False	NA	NA	False	AATAAA	-18	NA	48976068	49146847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777
transcript_47768.nic	chr13	+	1059	6	ISM	ENSG00000102531.16	ENST00000378383.5	2037	8	-157	10252	0	-10252	5prime_fragment	FALSE	canonical	3	80	junction_1	25.772853935876	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGTAACTGTTTGAAG	5	True	NA	10	True	NA	NA	NA	48975911	49136595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331
transcript_47770.known	chr13	+	5714	24	FSM	ENSG00000102531.16	ENST00000398316.7	5714	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	27.0079453407917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGTTTATTGTATTCAT	-33	True	NA	18	True	AATAAA	-21	NA	49110312	49209593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49110407_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_47772.known	chr13	+	3386	10	FSM	ENSG00000102543.14	ENST00000251108.10	3386	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	21.7704069159019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGCCTCAGAAGGTG	-3	True	NA	3	True	AATAAA	-18	NA	49247924	49293485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489_49268060_49274290_49274341_49278349_49278520_49280508_49280699_49286221_49286283_49291683
transcript_47773.known	chr13	+	677	5	FSM	ENSG00000102543.14	ENST00000466868.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	18.7416648139913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	19	True	NA	9	True	AATAAA	-17	NA	49247946	49267785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49267489
transcript_47775.known	chr13	-	3502	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	4.62168800331654	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTTGGTTTCATTC	-24	True	NA	-21	True	AATAAA	-13	NA	49444064	49308649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
transcript_47777.nic	chr13	+	3061	14	FSM	ENSG00000136169.17	ENST00000611815.2	6203	14	-20	3162	-20	-3161	multi-exon	FALSE	canonical	3	24	junction_1	8.76653129840516	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTATAAATATGTAACTAA	19	True	NA	2	True	AATAAA	-14	NA	49444253	49491841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_47785.known	chr13	+	1356	10	FSM	ENSG00000136147.18	ENST00000378319.8	1356	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	8.50852876403407	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTTGTACCAAATTTG	-25	True	NA	13	True	AATAAA	-15	NA	49495952	49528976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49496096_49506634_49506757_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49528510
transcript_47789.known	chr13	-	4008	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	27.0102861065105	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	0	True	NA	-5	True	AATAAA	-21	NA	49585558	49531945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
transcript_47793.known	chr13	+	3552	2	FSM	ENSG00000152213.4	ENST00000282026.2	3552	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGCTCATTTCCTTGC	-5	True	NA	NA	False	NA	NA	NA	49628506	49633872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49628616_49630429
transcript_47795.known	chr13	-	967	5	FSM	ENSG00000123179.14	ENST00000378284.6	967	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	519.777115694795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	6	True	NA	-19	True	AATAAA	-19	NA	49691463	49660722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49661865_49661928_49663056_49663196_49669776_49669847_49691253
transcript_47798.known	chr13	-	977	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	0	0	0	multi-exon	TRUE	canonical	3	1016	junction_2	71.1071179434395	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCAGTGTTATATTAAT	-17	True	NA	30	True	AGTAAA	-17	NA	49691486	49660673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
transcript_47799.known	chr13	-	810	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	510.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	31	True	NA	-19	True	AATAAA	-19	NA	49691438	49660722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49663056_49663196_49691253
transcript_47800.known	chr13	-	766	3	FSM	ENSG00000123179.14	ENST00000378272.9	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	502.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	6	True	NA	-19	True	AATAAA	-19	NA	49691463	49660722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49669776_49669847_49691253
transcript_47801.known	chr13	-	579	2	FSM	ENSG00000123179.14	ENST00000378270.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTTTAAGGCGACCAG	12	True	NA	-130	True	NA	NA	NA	49691457	49660833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49691253
transcript_47803.known	chr13	-	4222	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	27.8340506394596	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	1	True	NA	-48	True	AATAAA	-27	NA	49792682	49699319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_47810.known	chr13	-	3057	5	FSM	ENSG00000123178.15	ENST00000361840.8	3057	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	8.25757228245687	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTATCTACCTCTTTT	-14	True	NA	-7	True	ATTAAA	-24	NA	49936340	49912701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49931017_49931135_49936129
transcript_47813.known	chr13	-	1737	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	12	57	0	13	multi-exon	FALSE	canonical	3	35	junction_2	6.57647321898295	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTACTGTTTAGGTA	NA	False	NA	NA	False	ATTAAA	-37	NA	50082041	50043491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_47816.known	chr13	+	2607	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	59	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	245	False	NA	NA	False	NA	NA	NA	49997018	50014331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49997132_49997666_49997764_50011934
transcript_47818.known	chr13	+	1489	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	104	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGTATGCAGTTTT	0	True	NA	9	True	TATAAA	-14	NA	49997058	50013168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49997217_49997666_49997764_50011934
transcript_47820.known	chr13	+	7255	2	FSM	ENSG00000204977.10	ENST00000378182.4	7255	2	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	-17	True	NA	16	True	AATAAA	-17	NA	49997041	50018467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49997764_50011934
transcript_47822.known	chr13	+	2957	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	1870	False	NA	15	True	AATAAA	-21	NA	50082168	50107218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50082558_50083141_50083195_50104703
transcript_47823.known	chr13	+	2888	2	FSM	ENSG00000176124.15	ENST00000655550.1	2888	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTTCACTATTAACT	1870	False	NA	-1	True	AATAAA	-5	NA	50082168	50107202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50082558_50104703
transcript_47824.known	chr13	+	1120	4	FSM	ENSG00000176124.15	ENST00000462427.2	1120	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGATTTGTAAATATT	NA	False	NA	NA	False	AATATA	-24	NA	50415088	50533861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50415203_50433412_50433551_50527865_50528065_50533192
transcript_47827.known	chr13	+	1428	11	FSM	ENSG00000136104.21	ENST00000644297.1	1428	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	183.082740857788	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAGTGTATGACTGCTT	27	False	NA	4	True	AATAAA	-16	NA	50909879	50956761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910141_50927406_50927479_50929460_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_47830.known	chr13	+	1257	11	FSM	ENSG00000136104.21	ENST00000611510.5	1257	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	139.903573935765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAATTTCATGTTCTCT	105	False	NA	87	True	NA	NA	NA	50910154	50956572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910439_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_47831.known	chr13	+	3410	10	FSM	ENSG00000136104.21	ENST00000616907.2	3410	10	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_9	32.9005234676357	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTTTACATGTTTCA	7	True	NA	18	True	AATAAA	-15	NA	50910006	50956503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904
transcript_47832.known	chr13	+	1567	10	FSM	ENSG00000136104.21	ENST00000646731.1	1567	10	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	188.766169285353	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTGTCCAGTATGTG	-5	True	NA	4	True	ATTAAA	-17	NA	50909767	50970457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50969931
transcript_47848.known	chr13	-	800	5	FSM	ENSG00000226792.8	ENST00000433280.6	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	37.3589012151053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTGGTAGAGTTGAAA	962	False	NA	NA	False	NA	NA	NA	51172388	51084080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51113192_51113223_51172252
transcript_47861.known	chr13	-	826	4	FSM	ENSG00000226792.8	ENST00000569306.1	826	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.3245605355165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTCCCTGAGAAGC	1128	False	NA	NA	False	NA	NA	NA	51172222	51084123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51171987
transcript_47862.nnic	chr13	-	3020	4	NIC	ENSG00000226792.8	novel	3075	4	NA	NA	-288	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	31.1804782231162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGACAGATTCTTT	674	False	NA	-1	True	AATAAA	-20	NA	51172676	51082118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_51084326_51085318_51085560_51087927_51088076_51172252
transcript_47870.nnic	chr13	+	2285	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	0	151	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTAGTT	87	False	NA	11	True	ATTAAA	-18	NA	51169706	51176074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_51170463_51174545
transcript_47872.known	chr13	+	790	1	FSM	ENSG00000274652.1	ENST00000614264.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	9054	False	NA	5	True	AATAAA	-14	NA	51180177	51180967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51180200_51181000
transcript_47877.known	chr13	+	2104	5	FSM	ENSG00000150510.17	ENST00000280057.6	2104	5	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_2	136.968974589138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATATATTTTTTGAAT	-1	True	NA	7	True	AATAAA	-18	NA	51222370	51281480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51222570_51231347_51231380_51245311_51245420_51251467_51252202_51280449
transcript_47890.known	chr13	+	4728	4	FSM	ENSG00000150510.17	ENST00000322475.13	4728	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	21.2289111041209	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGGTTGTCTCATAAA	-1	True	NA	18	True	AATAAA	-18	NA	51222397	51284239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51222570_51231347_51231380_51251467_51252202_51280449
transcript_47896.known	chr13	+	2383	3	FSM	ENSG00000150510.17	ENST00000615498.4	2383	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	1	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATATTGTTTATACTAAAA	NA	False	NA	25	True	AGTAAA	-18	NA	51222333	51253582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51222570_51231347_51231380_51251467
transcript_47902.known	chr13	-	3767	20	FSM	ENSG00000102786.15	ENST00000469430.5	3767	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	76.1776608401724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGTAATCATTTAAAA	7	True	NA	22	True	AATAAA	-41	NA	51452791	51365198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51421111_51421335_51423029_51423091_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_47904.known	chr13	-	7350	18	FSM	ENSG00000102786.15	ENST00000311234.9	7350	18	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_14	23.2367088176919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGAATTATTTTTATG	-2	True	NA	-7	True	AATAAA	-18	NA	51453036	51361576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_47912.nic	chr13	-	2232	6	ISM	ENSG00000102786.15	ENST00000311234.9	7350	18	-32	26792	-32	-983	5prime_fragment	FALSE	canonical	3	145	junction_2	31.327942798722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACAAAGATT	NA	False	NA	NA	False	AAAAAG	-33	NA	51453068	51388368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_47914.known	chr13	-	15428	3	FSM	ENSG00000102786.15	ENST00000442263.4	15428	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTCGTGTAACGGAG	19	False	NA	NA	False	AATAAA	-14	NA	51453015	51436425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51451175_51451977_51452056_51452414
transcript_47915.known	chr13	+	906	2	FSM	ENSG00000236778.8	ENST00000598905.1	906	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCAAGGTTTCAGCTT	-22	True	NA	NA	False	AATAAA	-30	NA	51453340	51454830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51453419_51454002
transcript_47928.known	chr13	+	9369	12	FSM	ENSG00000139668.9	ENST00000298125.7	9369	12	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	28.3563510457199	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTCCCTTGGTTATGCT	8	True	NA	NA	False	ATTAAA	-18	NA	51584461	51767709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51755357_51755460_51756331_51756463_51758191_51758301_51759739
transcript_47949.nic	chr13	+	2156	9	NIC	ENSG00000139668.9	novel	9369	12	NA	NA	-11	820	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	62.0945599469068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTTGCAG	-10	True	NA	NA	False	AATACA	-13	NA	51584443	51753943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51752862
transcript_47950.nic	chr13	+	2340	9	NIC	ENSG00000139668.9	novel	9369	12	NA	NA	-28	987	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	62.0945599469068	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACTTAATTGATGTACT	7447	False	NA	NA	False	NA	NA	NA	51584426	51754110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51752862
transcript_47951.nic	chr13	+	4076	8	ISM	ENSG00000139668.9	ENST00000298125.7	9369	12	-491	13766	-484	820	5prime_fragment	FALSE	canonical	3	195	junction_5	21.5662245378352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTTGCAG	6991	False	NA	NA	False	AATACA	-13	NA	51583970	51753943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309
transcript_47952.nic	chr13	+	3752	8	ISM	ENSG00000139668.9	ENST00000298125.7	9369	12	0	13599	0	987	5prime_fragment	FALSE	canonical	3	195	junction_5	21.5662245378352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACTTAATTGATGTACT	8	True	NA	NA	False	NA	NA	NA	51584461	51754110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309
transcript_47970.known	chr13	+	6932	2	FSM	ENSG00000139668.9	ENST00000612477.1	6932	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GACAAAAATAAATAAAATAA	1	True	NA	NA	False	NA	NA	NA	51584454	51592586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51584825_51586024
transcript_47971.known	chr13	-	1199	10	FSM	ENSG00000102796.12	ENST00000682342.1	1199	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	24.5195814920078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	0	True	NA	-12	True	AATAAA	-32	NA	51804162	51767994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_47975.known	chr13	-	1119	9	FSM	ENSG00000102796.12	ENST00000444610.8	1119	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	27.5836795043736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	-1	True	NA	-10	True	AATAAA	-34	NA	51804163	51767992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_47979.known	chr13	-	1970	8	FSM	ENSG00000102796.12	ENST00000218981.5	1970	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	26.8586625709852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	5	True	NA	-12	True	AATAAA	-32	NA	51804157	51767994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_47982.known	chr13	-	1324	8	FSM	ENSG00000102796.12	ENST00000280056.6	1324	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	35.9262282678132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTACATGCCTCAT	20	True	NA	-9	True	ATTAAA	-17	NA	51804098	51770783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_47986.known	chr13	+	1793	1	FSM	ENSG00000231856.3	ENST00000618844.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAGTTTCATACAAAGTG	-4	True	NA	7	True	ATTAAA	-18	NA	51803837	51805630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51803800_51805600
transcript_47991.known	chr13	-	2414	16	FSM	ENSG00000136098.17	ENST00000618534.4	2414	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	42.1792998203305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTGTGCAGTTTTTC	5	True	NA	-4	True	ATTAAA	-19	NA	52159535	52132643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159197
transcript_47992.known	chr13	-	2128	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	25.9883734688332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-5	True	NA	-7	True	ATTAAA	-16	NA	52159597	52132646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_47995.known	chr13	-	2345	15	FSM	ENSG00000136098.17	ENST00000611833.4	2345	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	43.661733116947	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	-5	True	NA	-3	True	ATTAAA	-20	NA	52159861	52132642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143915_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_48.known	ERCC-00137	+	521	1	FSM	ERCC-00137A	DQ855000	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00137_+_0_500
transcript_4800.nnic	chr1	-	2087	7	NNC	ENSG00000007968.7	novel	550	2	NA	NA	-88	766	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.00867585115598	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTTGCAGGCGCCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	23531321	23505671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23506186_23516334_23516528_23519015_23519131_23520912_23521072_23521836_23522057_23524382_23524489_23530541
transcript_48005.known	chr13	+	6504	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	77.8279352160906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	8	True	NA	-29	True	NA	NA	NA	52012410	52033540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
transcript_4801.known	chr1	-	5196	7	FSM	ENSG00000007968.7	ENST00000361729.3	5196	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	3.8151743807532	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGCATCTTGTCTTT	-10	True	NA	-16	True	ATTAAA	-13	NA	23531233	23506437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23510149_23516334_23516528_23519015_23519131_23520912_23521072_23521836_23522057_23524382_23524489_23530541
transcript_48010.known	chr13	+	6510	4	FSM	ENSG00000253710.5	ENST00000521508.2	6510	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	5.79271573232759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGCTGTCAGGTTTAA	-5	True	NA	31	True	AATAAA	-27	NA	52012397	52033600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019144_52024005_52024938_52028318
transcript_48014.known	chr13	+	5510	3	FSM	ENSG00000253710.5	ENST00000679544.1	5510	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	80	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGCTCCATATGCCAA	-5	True	NA	-37	True	NA	NA	NA	52012397	52033532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019144_52028318
transcript_48017.known	chr13	+	6219	3	FSM	ENSG00000253710.5	ENST00000681053.1	6219	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	-5	True	NA	-29	True	NA	NA	NA	52012397	52033540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52024005_52024938_52028318
transcript_48020.known	chr13	+	1404	2	FSM	ENSG00000253710.5	ENST00000523764.1	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGCCAGAATGATG	-5	True	NA	NA	False	AAGAAA	-10	NA	52012397	52029657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52028318
transcript_48025.known	chr13	+	1983	2	FSM	ENSG00000253710.5	ENST00000616513.1	1983	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTTGGGTACGTCTTT	8	True	NA	18	True	ATTAAA	-14	NA	52012410	52017713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52015782
transcript_48026.known	chr13	+	5097	4	FSM	ENSG00000253710.5	ENST00000649340.2	5097	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.4578854208665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCTGGGCAATAAGCAAA	-5	True	NA	NA	False	NA	NA	NA	52012397	52032190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019144_52024005_52024938_52028321
transcript_48027.known	chr13	+	1520	3	FSM	ENSG00000253710.5	ENST00000681145.1	1520	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCACAAAGTCGTGAAGAA	8	True	NA	NA	False	AGTAAA	-4	NA	52012410	52029554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019148_52028321
transcript_48029.known	chr13	-	4425	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_8	28.2641806059444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTGAGCAGTT	-2	True	NA	-4	True	AATAAA	-24	NA	52450634	52412605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_4803.known	chr1	-	950	3	FSM	ENSG00000117318.9	ENST00000374561.6	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	4024	junction_1	56.5	3276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGACACCCGTCTCCA	-1	True	NA	-19	True	AATAAA	-22	NA	23559501	23557925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23558416_23558934_23559020_23559126
transcript_48037.nic	chr13	-	576	6	ISM	ENSG00000136100.14	ENST00000378060.9	4425	14	-28	21076	-28	1156	5prime_fragment	FALSE	canonical	3	210	junction_4	23.1222836242444	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACAAAAACATTTCTGAG	-30	True	NA	NA	False	AAAAAG	-9	NA	52450662	52433681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_48038.nic	chr13	-	464	5	ISM	ENSG00000136100.14	ENST00000378060.9	4425	14	-28	22232	-28	0	5prime_fragment	FALSE	canonical	3	210	junction_3	22.6163657557973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCCAGTTTCCCAGTC	-30	True	NA	NA	False	NA	NA	NA	52450662	52434837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_48039.known	chr13	-	3026	5	FSM	ENSG00000136114.17	ENST00000258613.5	3026	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTTGGTCTGTCATGT	0	True	NA	NA	False	AATAAA	-16	NA	52406172	52377166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52378790_52386027_52386187_52397231_52398195_52402542_52402682_52406030
transcript_48040.known	chr13	-	557	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGTGTTTGTGTGGTT	6	True	NA	-1	True	GATAAA	-18	NA	52455331	52454774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52454800_52455300
transcript_48041.known	chr13	+	3395	9	FSM	ENSG00000136108.15	ENST00000490903.5	3395	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	219.338458495085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	409	False	NA	7	True	ATTAAA	-15	NA	52455971	52476349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52456180_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_48043.known	chr13	+	1972	6	FSM	ENSG00000136108.15	ENST00000378034.7	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_2	59.3518323221786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTCTCTTGGTTTTGT	-36	True	NA	10	True	ATTAAA	-19	NA	52455438	52465843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294
transcript_48044.known	chr13	+	3614	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_2	70.2316479587372	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	3	True	NA	20	True	AATAAA	-18	NA	52455477	52476627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_4805.known	chr1	-	892	2	FSM	ENSG00000117318.9	ENST00000486541.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	3	4137	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTCTTCTTTCCTCC	398	False	NA	NA	False	NA	NA	NA	23559443	23558444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23559020_23559126
transcript_48052.known	chr13	+	825	6	FSM	ENSG00000273784.5	ENST00000398039.2	825	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.1770104267006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCCGAACAGCTGAGGA	21	False	NA	NA	False	NA	NA	NA	52600137	52642515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52600221_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_48053.nic	chr13	+	2259	6	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-41	23	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	36.5644636224846	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGGTGGAATCCGTA	0	True	NA	2	True	AATAAA	-20	NA	52617483	52643796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642368
transcript_48054.known	chr13	+	2158	6	FSM	ENSG00000273784.5	ENST00000683187.1	2158	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	23.3957261054236	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	10	True	NA	-21	True	NA	NA	NA	52617524	52643773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_4806.known	chr1	+	1017	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	6271	junction_1	2662.79367582244	2135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGGTTTCTTTTAC	5	True	NA	NA	False	ATTAAA	-17	NA	23691805	23696835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_48060.known	chr13	-	975	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTCTTGGTCATAA	36	False	NA	79	True	AATAAA	-16	NA	52652279	52651304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52651300_52652300
transcript_48063.known	chr13	+	1217	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	164.078023004716	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	-20	True	NA	33	True	AATAAA	-33	NA	52652838	52687872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_48065.nic	chr13	+	1160	13	ISM	ENSG00000165416.15	ENST00000343788.10	1217	14	-182	7817	-52	-7817	5prime_fragment	FALSE	canonical	3	166	junction_5	167.855820241328	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAAGTTGGAGGGAG	9326	False	NA	NA	False	GATAAA	-30	NA	52652656	52680055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973
transcript_48066.known	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	63.7640507391639	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	-23	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_4807.known	chr1	+	823	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	4661.59318688364	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	20	False	NA	23	True	AATAAA	-23	NA	23691820	23696425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_48070.nic	chr13	+	1064	12	ISM	ENSG00000165416.15	ENST00000310528.9	14161	13	-179	20854	-52	-7817	5prime_fragment	FALSE	canonical	3	438	junction_5	64.5346982074548	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAAGTTGGAGGGAG	9326	False	NA	NA	False	GATAAA	-30	NA	52652656	52680055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973
transcript_48077.known	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	400.800206531328	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-13	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_48079.nnic	chr13	-	1663	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	-322	0	combination_of_known_splicesites	FALSE	canonical	3	145	junction_3	445.115535563521	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	NA	False	NA	-10	True	AATAAA	-27	NA	52740142	52703263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_52703811_52708535_52708703_52712715_52712870_52733218_52733360_52739030_52739172_52739629
transcript_48087.known	chr13	-	3708	3	FSM	ENSG00000136099.13	ENST00000338862.5	3708	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGCCAATTGCTTT	-3	True	NA	-3	True	AATAAA	-19	NA	52848641	52843978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52844934_52845424_52845633_52846096
transcript_4809.known	chr1	+	1600	5	FSM	ENSG00000142676.14	ENST00000443624.6	1600	5	0	0	0	0	multi-exon	FALSE	canonical	3	6271	junction_1	2911.61488696565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	5	True	NA	10	True	AATAAA	-39	NA	23691805	23696412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23695909_23696343
transcript_48091.nnic	chr13	-	2188	5	NNC	ENSG00000234787.8	novel	1020	3	NA	NA	-43	6879	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	725.511199086548	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTATGGCATAGTTCAC	-11	True	NA	-18	True	AATAAA	-15	NA	54132909	54108903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_54110330_54110894_54111012_54127279_54127430_54130873_54131072_54132612
transcript_48094.nnic	chr13	-	1177	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-43	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	698.375749507384	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-11	True	NA	-3	True	CATAAA	-23	NA	54132909	54115782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
transcript_48095.nnic	chr13	-	1124	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-43	13	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	698.375749507384	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTTTATCTGCTAAAA	-11	True	NA	-56	True	NA	NA	NA	54132909	54115835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
transcript_48102.nnic	chr13	-	948	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	185.835650209772	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	75	False	NA	-3	True	CATAAA	-23	NA	54132878	54115782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54132612
transcript_48105.nic	chr13	-	1072	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	571.356864548477	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-11	True	NA	-3	True	CATAAA	-23	NA	54132909	54115782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
transcript_48108.nic	chr13	-	1006	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	571.356864548477	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCCTGTT	-11	True	NA	-69	True	NA	NA	NA	54132909	54115848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
transcript_48111.known	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	643.008726396635	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	1	True	NA	-5	True	ATTAAA	-18	NA	54132862	54124323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
transcript_48113.known	chr13	-	833	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	619.910387789146	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGTTTGTTTATAC	134	False	NA	NA	False	NA	NA	NA	54132819	54124994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
transcript_48115.nic	chr13	-	843	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	298	junction_2	37	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	75	False	NA	-3	True	CATAAA	-23	NA	54132878	54115782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54127279_54127430_54132612
transcript_48118.known	chr13	-	849	3	FSM	ENSG00000234787.8	ENST00000607494.5	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTCTAAACCTTATTC	102	False	NA	NA	False	ACTAAA	-19	NA	54132851	54124812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54125273_54127279_54127430_54132612
transcript_48120.known	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	87	False	NA	NA	False	AATAAA	-26	NA	54132866	54126861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54127430_54130873_54131072_54132612
transcript_48125.nic	chr13	-	335	2	ISM	ENSG00000234787.8	ENST00000607494.5	849	3	-27	2548	-12	0	5prime_fragment	FALSE	canonical	3	298	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTTTTCTTCTGGACTG	75	False	NA	-37	True	AATAAA	-14	NA	54132878	54127360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_54127430_54132612
transcript_48126.nic	chr13	-	496	2	ISM	ENSG00000234787.8	ENST00000451744.1	1020	3	-43	4011	-43	-3512	5prime_fragment	FALSE	canonical	3	1589	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCCTGTCCCCTTCTTA	-11	True	NA	NA	False	NA	NA	NA	54132909	54130872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_54131072_54132612
transcript_4813.known	chr1	+	879	5	FSM	ENSG00000142676.14	ENST00000458455.2	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	6685	junction_4	2295.02585769747	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTCTGTTGTGTGT	505	False	NA	16	True	AATAAA	-45	NA	23692305	23696418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_48144.nnic	chr13	+	1320	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23193	-87081	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCAGCGTGGCTGTGT	NA	False	NA	NA	False	AATACA	-22	NA	55039751	55074409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_4815.known	chr1	+	2671	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	1	2166	1	-2130	multi-exon	FALSE	canonical	3	368	junction_10	27.258026340878	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATTATCCCCCA	-9	True	NA	11	True	AATAAA	-15	NA	23743471	23759893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_48155.known	chr13	-	4745	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0384263749541	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-9	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_48156.known	chr13	-	3549	27	FSM	ENSG00000139734.19	ENST00000377908.6	3549	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.4890910307302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACTGGTTTTTAAAAA	4	True	NA	NA	False	NA	NA	NA	60163766	59666583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60163586
transcript_48157.nic	chr13	-	3273	25	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	36837	-56	26779	5prime_fragment	FALSE	canonical	0	0	junction_2	37.9119731527302	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGCAGAGGAAAAAGAA	NA	False	NA	-3	True	AATAAA	-18	NA	60163984	59810895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_48160.nic	chr13	-	2318	18	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	150786	-56	-63591	5prime_fragment	FALSE	canonical	3	104	junction_17	23.146741159342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAAATCGATTAAGAA	NA	False	NA	NA	False	NA	NA	NA	60163984	59924844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_48162.nic	chr13	-	2291	17	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	195886	-56	-108691	5prime_fragment	FALSE	canonical	3	104	junction_16	23.0837469878701	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTTTAACATCTTGAT	NA	False	NA	NA	False	AATACA	-19	NA	60163984	59969944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_48165.nic	chr13	-	2132	16	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	196838	-56	-109643	5prime_fragment	FALSE	canonical	3	104	junction_15	23.5413584050614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAAACCTGAAATCAG	NA	False	NA	NA	False	AAGAAA	-1	NA	60163984	59970896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_48171.nic	chr13	-	919	6	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	242012	-56	-154817	5prime_fragment	FALSE	canonical	3	104	junction_5	16.8475517509222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTGCTAATAATTA	NA	False	NA	NA	False	NA	NA	NA	60163984	60016070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_48173.known	chr13	+	2484	14	FSM	ENSG00000083544.16	ENST00000377894.6	2484	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.0186114620046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTTTTATTTGCC	1	True	NA	21	True	AATAAA	-22	NA	60396987	60573877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_48175.known	chr13	+	2645	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	7.8401183423021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	-7	True	NA	15	True	AATAAA	-16	NA	60397219	60573871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_48178.known	chr13	+	3019	14	FSM	ENSG00000083544.16	ENST00000196169.7	3019	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	16.7536978166775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTTTTATTTGCCT	NA	False	NA	22	True	AATAAA	-23	NA	60396456	60573878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_48179.nic	chr13	+	2014	11	ISM	ENSG00000083544.16	ENST00000377881.8	2645	14	-257	45034	24	0	5prime_fragment	FALSE	canonical	3	43	junction_7	5.45527267879434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAACATCTATTCCTGAT	-24	True	NA	NA	False	AAAAAG	-6	NA	60396962	60528837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366
transcript_48183.known	chr13	-	28227	2	FSM	ENSG00000184226.15	ENST00000377861.4	28227	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGAGACTTTGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	67230445	67201014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_67228576_67229779
transcript_48186.known	chr13	-	2231	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	32.5	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGTACTTTTGTTTT	-4	True	NA	-10	True	AATAAA	-16	NA	72727629	72708366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_72710346_72718951_72719098_72727523
transcript_48189.known	chr13	-	10571	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_20	24.2373162705775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTAATTGCAAACT	3	True	NA	-4	True	AATAAA	-17	NA	72781900	72752168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
transcript_48190.known	chr13	-	5232	21	FSM	ENSG00000083520.15	ENST00000377780.8	5232	21	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_19	56.7355928848902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	234	False	72781945	NA	False	NA	NA	NA	72781925	72757442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72781288_72781357_72781604
transcript_48192.known	chr13	+	2760	12	FSM	ENSG00000136122.18	ENST00000390667.11	2760	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	20.8473396443751	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	0	True	NA	22	True	AATAAA	-16	NA	72727922	72756196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_72728008_72728925_72729094_72731280_72731388_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_48194.known	chr13	+	1673	11	FSM	ENSG00000136122.18	ENST00000651376.1	1673	11	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_2	29.0757631026255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTCTGTCAGAATCAA	0	True	NA	NA	False	AAAACA	-31	NA	72727922	72755216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_48198.nic	chr13	-	656	3	ISM	ENSG00000083520.15	ENST00000490646.1	2934	20	-91	18549	-20	2622	5prime_fragment	FALSE	canonical	3	175	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGCCATAGAAGAAGG	0	True	NA	NA	False	NA	NA	NA	72781945	72778223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_72778381_72780845_72781004_72781604
transcript_48201.known	chr13	+	3080	18	FSM	ENSG00000083535.16	ENST00000326291.11	3080	18	0	0	0	0	multi-exon	TRUE	canonical	2	42	junction_8	9.40624838341616	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGAAAGTCTGTTGC	2	True	NA	NA	False	AATAAA	-41	NA	72782132	73016461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590_72973676_72998821_72998996_73015868
transcript_48208.known	chr13	-	6182	19	FSM	ENSG00000136111.14	ENST00000377625.6	6182	19	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_18	11.960841458487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTACTTTTCGGGAG	522	False	NA	4	True	AATAAA	-26	NA	75482114	75284664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75287026_75288933_75289111_75292101_75292272_75294853_75295014_75299329_75299575_75302242_75302402_75306312_75306472_75309941_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
transcript_48210.nic	chr13	-	2969	12	ISM	ENSG00000136111.14	ENST00000377625.6	6182	19	-232	25291	-177	79	5prime_fragment	FALSE	canonical	3	92	junction_11	9.89364935302748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAACTTGAAGGTTAGC	-22	True	NA	NA	False	AAAAAG	-5	NA	75482346	75309955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
transcript_48211.nic	chr13	-	2915	12	ISM	ENSG00000136111.14	ENST00000377625.6	6182	19	-257	25370	-202	0	5prime_fragment	FALSE	canonical	3	92	junction_11	9.89364935302748	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAAAAGAACTGAGG	265	False	NA	NA	False	AAGAAA	-4	NA	75482371	75310034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
transcript_48215.known	chr13	-	1669	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	1994	junction_2	63.5207752541551	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTTGAATTTAAAAAGC	-9	True	NA	NA	False	AATAAA	-17	NA	75537841	75525213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
transcript_48216.known	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	998.670240870328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-9	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
transcript_4822.known	chr1	+	5154	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	-316	0	-293	0	multi-exon	FALSE	canonical	3	368	junction_10	27.258026340878	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTCTTCCTTACT	0	True	NA	NA	False	AATAAA	-13	NA	23743154	23762059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_48224.known	chr13	+	931	9	FSM	ENSG00000118939.18	ENST00000377595.8	931	9	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_8	56.9802597396677	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAAAACTAGCAATAG	10	True	NA	117	True	NA	NA	NA	75549790	75606020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_48225.nic	chr13	+	960	9	NIC	ENSG00000118939.18	novel	696	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	362.853599093353	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	-18	True	NA	30	True	ATTAAA	-17	NA	75549482	75605933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_4823.known	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	19	junction_2	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-3	True	NA	NA	False	NA	NA	NA	23778287	23760381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
transcript_48232.known	chr13	-	3506	5	FSM	ENSG00000005812.11	ENST00000355619.10	3506	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	15.6424902109607	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTACTTTTTAAA	1	True	NA	-10	True	AATAAA	-15	NA	77027159	77005259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512_77021862_77026826
transcript_48235.known	chr13	-	1093	5	FSM	ENSG00000005812.11	ENST00000417323.1	1093	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	39.5916657896583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTATTTTTTTTTATA	0	True	NA	NA	False	NA	NA	NA	77027195	77007564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021656_77021862_77026826
transcript_48236.known	chr13	+	604	4	FSM	ENSG00000102805.16	ENST00000635989.1	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	51.389579574938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGTTCAAGTAGCAAC	2	True	NA	NA	False	NA	NA	NA	76992088	76996099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_76992272_76995062_76995229_76995456_76995514_76995901
transcript_48237.known	chr13	+	5243	4	FSM	ENSG00000102805.16	ENST00000377453.9	5243	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	18.0616229121921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAACCTTGTATCTTCA	-6	True	NA	NA	False	AATAGA	-8	NA	76992080	77005117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77000457
transcript_4824.known	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	23	junction_2	5.55777733351102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-12	True	NA	-3	True	ATTAAA	-18	NA	23778296	23760520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
transcript_48242.known	chr13	+	2341	3	FSM	ENSG00000102805.16	ENST00000485938.4	2341	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAGGATATGTTAAC	-28	True	NA	NA	False	ATTAAA	-45	NA	76992058	76997863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_76992272_76995062_76995229_76995901
transcript_48246.nic	chr13	-	1572	7	ISM	ENSG00000005810.19	ENST00000683697.1	15359	85	-32	225374	-32	0	5prime_fragment	FALSE	canonical	2	9	junction_6	1.77169096878911	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAGAAAAGAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	77327126	77270030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_77270064_77270295_77270539_77273471_77273669_77278757_77278912_77288160_77288377_77296598_77296675_77326473
transcript_48247.known	chr13	-	649	2	FSM	ENSG00000005810.19	ENST00000491491.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTAAAGCTGCTGGTAA	33	True	NA	NA	False	AAGAAA	-45	NA	77327050	77296602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77296675_77326473
transcript_48248.known	chr13	-	2555	8	FSM	ENSG00000136160.17	ENST00000475537.2	2555	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	140.01603406724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATCTACAATTTTTT	227	False	NA	NA	False	NA	NA	NA	77919390	77897349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919065
transcript_48249.known	chr13	-	4471	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	125.107300884856	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTGTGTGTTTCATTG	NA	False	NA	0	True	ATTAAA	-24	NA	77919768	77895480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
transcript_48253.known	chr13	-	4300	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	100.500414592843	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGACTGTGTGTT	-2	True	NA	-6	True	ATTAAA	-18	NA	77918831	77895486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_48258.known	chr13	-	1571	7	FSM	ENSG00000136160.17	ENST00000626030.1	1571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.870305173673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAACTTGTTCTTTAAT	1	True	NA	NA	False	TATAAA	-5	NA	77918799	77896407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77896559_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_48259.known	chr13	-	3507	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	28.2460616723819	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGATGTCGATGATGA	-6	True	NA	-8	True	AATAAA	-20	NA	78659155	78614288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_48263.known	chr13	-	5230	22	FSM	ENSG00000139746.16	ENST00000622611.4	5230	22	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	57.6656246219405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	3	True	NA	NA	False	NA	NA	NA	79406221	79318867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79353152_79353225_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365734_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_48267.known	chr13	-	3624	21	FSM	ENSG00000139746.16	ENST00000267229.11	3624	21	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	33.9527244856727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAAGACAATGTTCC	9	True	NA	-113	True	AAAAAG	-42	NA	79405788	79319953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_4827.known	chr1	+	1590	6	FSM	ENSG00000057757.10	ENST00000246151.9	1590	6	0	0	0	0	multi-exon	TRUE	canonical	3	390	junction_4	40.0149971885542	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTCTTTTGAG	14	True	NA	17	True	AATAAA	-17	NA	23778417	23788232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23778714_23779437_23779482_23779863_23779942_23785674_23785780_23786314_23786424_23787274
transcript_48276.known	chr13	-	5258	22	FSM	ENSG00000139746.16	ENST00000438737.3	5258	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	48.2713888771287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	-31	True	NA	NA	False	NA	NA	NA	79406255	79318867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79353152_79353225_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_4828.nnic	chr1	+	1581	5	NIC	ENSG00000057757.10	novel	1590	6	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	193.505813866147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTCTTTTGAG	-21	True	NA	17	True	AATAAA	-17	NA	23778382	23788232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_23778714_23779863_23779942_23785674_23785780_23786314_23786424_23787274
transcript_48280.known	chr13	+	2359	4	FSM	ENSG00000227354.7	ENST00000654024.1	2359	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	10.1980390271856	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTACATAGTGAATACAA	-7	True	NA	NA	False	NA	NA	NA	79406292	79424022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_79406478_79417834_79417917_79420759_79420816_79421986
transcript_48281.known	chr13	-	2192	3	FSM	ENSG00000139746.16	ENST00000472143.2	2192	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	6	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	79406477	79376216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79377516_79378788_79378908_79405703
transcript_48287.known	chr13	+	2324	8	FSM	ENSG00000102471.15	ENST00000620924.1	2324	8	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_7	22.0305909765378	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTTTGTCTCATT	0	True	NA	81	True	AATAAA	-27	NA	79481473	79554096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
transcript_48294.known	chr13	-	2708	2	FSM	ENSG00000136158.12	ENST00000377102.5	2708	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	2303	False	NA	-22	True	ATTAAA	-1	NA	80339659	80335975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_80337757_80338732
transcript_48295.known	chr13	-	2286	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	2	True	NA	-22	True	ATTAAA	-1	NA	80341126	80335975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_80337757_80340621
transcript_48296.known	chr13	-	5189	1	FSM	ENSG00000178235.8	ENST00000377084.3	5189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCTAAGGCCATTCAT	6	True	NA	NA	False	AATAAA	-21	NA	83882393	83877204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_83877200_83882400
transcript_48297.known	chr13	+	792	5	FSM	ENSG00000183098.11	ENST00000617456.1	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	9.52299847737046	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTTTTGGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	94286347	94403217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_94286480_94305979_94306124_94382413_94382551_94398465_94398642_94403014
transcript_48300.nic	chr13	+	1186	2	ISM	ENSG00000183098.11	ENST00000377047.9	7121	9	603346	379499	-456195	-374696	internal_fragment	FALSE	canonical	3	118	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACTGTACTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	93830152	94028521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_93830546_94027728
transcript_48303.nic	chr13	-	2020	12	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	33.6041614896353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	94596299	94574053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94595974
transcript_48304.known	chr13	-	1797	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	16.5848681405572	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	14	True	NA	NA	False	AATAAA	-17	NA	94596152	94574053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_4831.known	chr1	+	1635	10	FSM	ENSG00000011009.11	ENST00000374514.8	1635	10	0	0	0	0	multi-exon	FALSE	canonical	3	1752	junction_1	132.477904050934	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	-9	True	NA	13	True	ATTAAA	-17	NA	23791144	23795539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_48313.known	chr13	+	8884	9	FSM	ENSG00000152749.8	ENST00000376958.5	8884	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	23.3288314109387	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGTCTGCAAATAAT	-18	True	NA	26	True	AATAAA	-38	NA	94601856	94634661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_94602073_94605390_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
transcript_48326.known	chr13	+	3287	2	FSM	ENSG00000227640.4	ENST00000438290.2	3287	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACAGGCTGGCTTGCTTGC	-1	True	NA	NA	False	AATAAA	-17	NA	94712715	94716246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_94713394_94713637
transcript_4833.known	chr1	+	868	10	FSM	ENSG00000011009.11	ENST00000374503.7	868	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	628.151963213432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGGAGGCGGGCCCC	20	False	NA	NA	False	NA	NA	NA	23791202	23794955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794551_23794601_23794681
transcript_48330.known	chr13	-	5855	31	FSM	ENSG00000125257.16	ENST00000645237.2	5855	31	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_12	25.2905120549189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGATCTGTATTTCTG	-3	True	NA	-26	True	AATAAA	-19	NA	95301451	95019834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95021683_95034604_95034740_95043681_95043788_95044265_95044439_95053094_95053185_95062703_95062860_95071661_95071854_95073203_95073305_95074213_95074325_95075431_95075552_95083139_95083291_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
transcript_48335.known	chr13	-	2903	21	FSM	ENSG00000125257.16	ENST00000629385.1	2903	21	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	43.5349285057412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTCTTAACAATTT	2	True	NA	NA	False	ATTAAA	-22	NA	95301446	95095943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95096180_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
transcript_48339.nic	chr13	-	2093	6	ISM	ENSG00000125257.16	ENST00000644471.1	2225	14	-383	38383	-318	-38383	5prime_fragment	FALSE	canonical	3	157	junction_3	24.2932089275995	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCTTTTGATCAAGAGA	16	False	NA	NA	False	AAAAAG	-4	NA	95301793	95208604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
transcript_48341.nnic	chr13	+	528	2	Antisense	novelGene_ENSG00000223298.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	113	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTCTCAAGTCTGCT	NA	False	NA	19	True	AATAAA	-14	NA	95300909	95311008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_95301264_95310834
transcript_48343.nnic	chr13	+	1089	6	NNC	ENSG00000134873.10	novel	2466	5	NA	NA	-56	-1523	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	300.767418448209	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTAAAATGTTTTCTA	241	False	NA	19	True	AATAAA	-15	NA	95552663	95578236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_95552974_95557534_95557625_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_48346.known	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_3	42.2315048275574	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	-8	True	NA	4	True	AATAAA	-19	NA	95552719	95579759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_48355.known	chr13	-	7491	23	FSM	ENSG00000134874.18	ENST00000376829.7	7491	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_18	28.7429833334866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGAAAATGATTAGTAT	0	True	NA	NA	False	AATAAA	-25	NA	95644706	95578201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95582314_95584735_95584911_95586005_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95599364_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_48361.nnic	chr13	-	4525	22	NIC	ENSG00000134874.18	novel	7491	23	NA	NA	-11	851	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	31.2469499645352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGACTGTGGCTGTG	NA	False	NA	-9	True	AGTAAA	-14	NA	95644717	95581118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_95582314_95584735_95584911_95586005_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_48366.nic	chr13	-	3194	21	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-11	7825	-11	-1449	5prime_fragment	FALSE	canonical	3	35	junction_16	25.3921247633986	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAATTACAAGAACTAAA	NA	False	NA	NA	False	NA	NA	NA	95644717	95586026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95599364_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_48374.nic	chr13	-	2411	15	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-11	21155	-11	0	5prime_fragment	FALSE	canonical	3	35	junction_10	10.3193893190618	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGATCAGGTTTACCT	NA	False	NA	NA	False	AATAGA	-32	NA	95644717	95599356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_4838.nnic	chr1	+	1757	10	NIC	ENSG00000011009.11	novel	1635	10	NA	NA	-17	0	combination_of_known_splicesites	TRUE	canonical	3	57	junction_1	617.618204810691	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	NA	False	NA	13	True	ATTAAA	-17	NA	23791127	23795539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_23791251_23792551_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_48381.nic	chr13	-	1747	8	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-11	46657	-11	12150	5prime_fragment	FALSE	canonical	3	35	junction_3	5.79232426648951	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAACTAGTTGATGAAA	NA	False	NA	64	True	AAGAAA	-2	NA	95644717	95624858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_48385.nic	chr13	-	1676	7	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-11	51787	-11	7020	5prime_fragment	FALSE	canonical	3	35	junction_2	4.02768199119819	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCAGGCAGAATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	95644717	95629988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_48388.known	chr13	-	1580	6	FSM	ENSG00000134874.18	ENST00000466027.1	1580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.4996774159981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGGTGGCCTAAAGT	40	False	NA	NA	False	AGTAAA	-15	NA	95644666	95637008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95637177_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_48391.known	chr13	+	5590	12	FSM	ENSG00000102580.15	ENST00000602402.6	5590	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.08208315770099	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGCTTTTGATTCAT	-6	True	NA	22	True	AATAAA	-23	NA	95677138	95794988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006_95787156_95790872
transcript_48398.nic	chr13	+	1439	11	ISM	ENSG00000102580.15	ENST00000602402.6	5590	12	-20	7888	-20	-4743	5prime_fragment	FALSE	canonical	3	55	junction_3	6.29603049547888	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGAAAAAGTTCATTGA	2	True	NA	NA	False	AAGAAA	-9	NA	95677118	95787100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006
transcript_48400.nic	chr13	+	546	5	ISM	ENSG00000102580.15	ENST00000602402.6	5590	12	-20	37329	-20	-34184	5prime_fragment	FALSE	canonical	3	55	junction_3	5.06828373317832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGAAAATGAAGAAAAGGAA	2	True	NA	NA	False	NA	NA	NA	95677118	95757659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643
transcript_48401.known	chr13	-	4850	39	FSM	ENSG00000102595.21	ENST00000376747.8	4850	39	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_20	44.4943271929644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	-5	True	NA	-4	True	AATAAA	-21	NA	96053401	95801579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_48409.known	chr13	-	1547	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	36.8443506231214	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTTTTAATTGTAAT	-4	True	NA	-17	True	AATAAA	-16	NA	96053400	95984909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_48413.known	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	64.0707517084808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	3	True	NA	NA	False	NA	NA	NA	96053393	95990144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_48419.nic	chr13	-	742	2	ISM	ENSG00000102595.21	ENST00000621375.5	1004	8	87	35560	-2	-35560	5prime_fragment	FALSE	canonical	3	192	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCAGGTGTGGTGTTTC	1	True	NA	NA	False	AATAAA	-14	NA	96053395	96031470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_96031972_96053154
transcript_48421.known	chr13	+	3419	26	FSM	ENSG00000065150.21	ENST00000490680.5	3419	26	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_11	190.114508652023	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	12	False	NA	33	True	AATAAA	-19	NA	97976631	98021882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
transcript_48438.known	chr13	+	5103	28	FSM	ENSG00000152767.17	ENST00000627049.2	5103	28	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	137.0775015333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTCTGTAGTCTTCA	2	True	NA	50	True	AAAACA	-4	NA	98143097	98449771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98437765_98437859_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
transcript_48453.known	chr13	+	10419	27	FSM	ENSG00000152767.17	ENST00000319562.11	10419	27	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	48.3132193065554	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTTGAAACTAATTT	-2	True	NA	NA	False	NA	NA	NA	98143093	98455176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
transcript_4848.known	chr1	+	842	9	FSM	ENSG00000011009.11	ENST00000495365.5	842	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	660.606539477169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCCTGGCCGGGCCTT	20	False	NA	NA	False	NA	NA	NA	23791202	23794875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_48480.known	chr13	+	13532	13	FSM	ENSG00000152767.17	ENST00000596580.2	13532	13	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	23.5171332342094	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTTTTTCTCCGG	-1	True	NA	27	True	AATAAA	-20	NA	98143415	98407494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226
transcript_48484.nic	chr13	+	1001	7	ISM	ENSG00000152767.17	ENST00000596580.2	13532	13	-303	22663	15	0	5prime_fragment	FALSE	canonical	3	446	junction_2	16.9057846773096	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAACCACATGTAAGTC	-6	True	NA	NA	False	AATACA	-43	NA	98143112	98384831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729
transcript_48490.known	chr13	+	1021	3	FSM	ENSG00000152767.17	ENST00000376581.9	1021	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	244.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTGTCTTACCAGC	63	False	NA	NA	False	AATAAA	-17	NA	98143479	98245304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_98143493_98213219_98213414_98244490
transcript_48491.known	chr13	-	9605	11	FSM	ENSG00000102572.15	ENST00000539966.6	9605	11	0	0	0	0	multi-exon	TRUE	canonical	3	576	junction_4	70.9146670301708	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCATTCCATCTCT	-1	True	NA	NA	False	AATAAA	-17	NA	98577107	98445184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_98453210_98457167_98457305_98460371_98460441_98461773_98461898_98463690_98463837_98466375_98466562_98474820_98474979_98475249_98475359_98482264_98482322_98519242_98519474_98576744
transcript_48493.known	chr13	-	3124	23	FSM	ENSG00000088386.17	ENST00000376503.10	3124	23	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_4	3.00996966020787	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAGTGTTCATGTATCT	-18	True	NA	-4	True	AATAAA	-14	NA	98752672	98683800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_98684916_98686189_98686298_98687580_98687725_98688247_98688357_98688469_98688578_98702479_98702530_98704288_98704436_98706133_98706254_98708685_98708768_98709571_98709661_98709741_98709775_98709866_98709912_98711853_98711944_98712497_98712585_98715877_98715961_98719236_98719321_98721494_98721586_98721803_98721904_98723911_98724032_98726122_98726265_98726367_98726450_98726842_98726860_98752594
transcript_48494.known	chr13	-	1771	2	FSM	ENSG00000228889.8	ENST00000658188.1	1765	2	-9	3	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	NA	False	NA	-15	True	AATAAA	-16	NA	99200710	99196376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_99197803_99200365
transcript_48496.known	chr13	-	1749	2	FSM	ENSG00000228889.8	ENST00000668873.1	1749	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATCCTGCTCATTCT	NA	False	NA	-80	True	CATAAA	-25	NA	99200717	99196441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_99197803_99200329
transcript_48500.nic	chr13	+	2328	10	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	231.104647345507	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCAGTATTTTTCTAT	-9	True	NA	23	True	AATAAA	-17	NA	99200846	99386427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_99200940_99201428_99201568_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_48503.known	chr13	+	2259	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_8	30.7164451068153	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCACTGCTCGTCTT	-2	True	NA	10	True	AATAAA	-40	NA	99200853	99386504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_48507.nnic	chr13	+	2179	8	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	-39	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	197.208374206429	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTTCAGTATTTTTCT	310	False	NA	21	True	AATAAA	-15	NA	99200734	99386425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99385227
transcript_48514.known	chr13	+	1855	6	FSM	ENSG00000134882.16	ENST00000494576.5	1855	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_5	37.1375820429925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTTCTATCAGACTT	NA	False	NA	30	True	AATAAA	-24	NA	99244514	99386434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_48517.known	chr13	+	3858	19	FSM	ENSG00000125304.10	ENST00000642475.1	3858	19	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	510.820125501417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGAGTCTTTCAATTT	NA	False	NA	-44	True	TTTAAA	-7	NA	99498955	99563334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99499470_99500596_99500785_99501018_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_48519.known	chr13	+	3417	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_5	198.62165667419	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTTTTGAGA	-1	True	NA	NA	False	NA	NA	NA	99501471	99564048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_48521.known	chr13	+	1169	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	6	6	6	-6	multi-exon	FALSE	canonical	3	66	junction_7	16.3013611394877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	19	True	NA	4	True	ATTAAA	-16	NA	99606695	99892564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_48527.nnic	chr13	+	954	2	NNC	ENSG00000125246.16	novel	1127	7	NA	NA	-23	-206504	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCCCAAAACCAAACAACA	NA	False	NA	NA	False	ATTAAA	-16	NA	99606645	99658734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_99606758_99657892
transcript_48530.known	chr13	-	913	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	119	6	102	-6	multi-exon	FALSE	canonical	3	261	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGATTTGAGGATTGC	95	False	NA	-12	True	AATAAA	-19	NA	100088848	100086030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100086728_100088632
transcript_48536.known	chr13	+	2484	24	FSM	ENSG00000175198.17	ENST00000376285.6	2484	24	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_22	29.9563008763234	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	6	True	NA	32	True	AATAAA	-19	NA	100089092	100530435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_48539.known	chr13	+	2418	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_21	64.7628381605653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	29	True	AATAAA	-16	NA	100089014	100530432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
transcript_48543.known	chr13	+	2481	23	FSM	ENSG00000175198.17	ENST00000376286.8	2481	23	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	75.2363218946235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	29	True	AATAAA	-16	NA	100089014	100530432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_100089226_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_48554.known	chr13	-	393	3	FSM	ENSG00000134864.11	ENST00000471912.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCAGCCTTTCGGGCGCG	2889	False	NA	NA	False	NA	NA	NA	100588731	100532513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100532602_100583824_100583998_100588599
transcript_48555.known	chr13	-	2644	3	FSM	ENSG00000134864.11	ENST00000683975.1	2644	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAATCCTTCATTCC	-25	True	NA	NA	False	ATTAAA	-18	NA	100588789	100530179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100532602_100583824_100583998_100588740
transcript_48560.known	chr13	-	348	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	943	False	NA	NA	False	NA	NA	NA	100540248	100539900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100539900_100540200
transcript_48567.known	chr13	-	3911	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	22.1289710114296	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTTTTTTTTG	12	True	NA	-2	True	AATAAA	-16	NA	100674795	100603624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_48569.known	chr13	-	3483	18	FSM	ENSG00000125247.16	ENST00000376234.7	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	38.1190994639779	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	NA	False	NA	-4	True	AGTAAA	-26	NA	100674879	100603926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
transcript_48578.nic	chr13	-	2999	15	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-146	21152	-62	133	5prime_fragment	FALSE	canonical	3	137	junction_9	13.402710660953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTTCATTCTAACCAA	NA	False	NA	NA	False	AATAAA	-18	NA	100674941	100624776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_4858.known	chr1	+	1072	8	FSM	ENSG00000011009.11	ENST00000374502.7	1072	8	0	0	0	0	multi-exon	FALSE	canonical	3	1752	junction_1	130.029039142832	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCAAGGCCTGGCCGG	5	True	NA	NA	False	NA	NA	NA	23791220	23794870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223
transcript_48580.nic	chr13	-	2323	15	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-146	21828	-62	0	5prime_fragment	FALSE	canonical	3	137	junction_9	13.402710660953	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCCCATACATTTTATA	NA	False	NA	-9	True	AATAAA	-19	NA	100674941	100625452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_48596.nic	chr13	-	2409	6	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-146	51392	-62	8103	5prime_fragment	FALSE	canonical	3	137	junction_1	8.17312669668102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCGTTGTGGCTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	100674941	100655016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_48598.known	chr13	+	1074	1	FSM	ENSG00000272143.1	ENST00000606448.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGTCGTGAACAGAG	7	True	NA	8	True	ATTAAA	-16	NA	102394629	102395703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102394600_102395700
transcript_48601.known	chr13	+	5484	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_24	65.6734797715426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTATTCATTTGTG	-15	True	NA	NA	False	AATAAA	-17	NA	102596985	102679958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_48605.known	chr13	+	3931	29	FSM	ENSG00000134900.12	ENST00000376065.8	3931	29	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_13	34.0503079191328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGACGTGTGGCTTAA	2	True	NA	10	True	ATTAAA	-23	NA	102597002	102678461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_48608.nic	chr13	+	3711	28	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-67	2098	-50	0	5prime_fragment	FALSE	canonical	3	210	junction_13	28.3231402628385	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTTGTGGAAGAAAAAC	-7	True	NA	NA	False	AATAAA	-30	NA	102596935	102676363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295
transcript_48611.nic	chr13	+	3125	24	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-67	21336	-50	0	5prime_fragment	FALSE	canonical	3	210	junction_13	27.4106212080181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTCAGAAAAAGAG	-7	True	NA	30	True	NA	NA	NA	102596935	102657125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055
transcript_48612.nnic	chr13	+	2133	14	NNC	ENSG00000134900.12	novel	4341	27	NA	NA	-50	5514	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	73.2409495186302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATCTTTAATTTTTGG	-7	True	NA	NA	False	AAAAAG	-9	NA	102596935	102637046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102636694
transcript_48613.nic	chr13	+	2435	13	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-67	41415	-50	5514	5prime_fragment	FALSE	canonical	3	234	junction_7	23.2598545423941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATCTTTAATTTTTGG	-7	True	NA	NA	False	AAAAAG	-9	NA	102596935	102637046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223
transcript_48614.known	chr13	-	1362	6	FSM	ENSG00000151287.17	ENST00000376032.9	1362	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	16.1567323428966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCACTGAAGGCTT	2	True	NA	-1	True	AATAAA	-15	NA	102773786	102765887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_48616.known	chr13	-	1038	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	47.0345617604757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-14	True	NA	-1	True	ATTAAA	-23	NA	102773759	102766109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
transcript_48617.known	chr13	-	959	5	FSM	ENSG00000151287.17	ENST00000376029.3	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	51.337121072378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-23	True	NA	-1	True	ATTAAA	-23	NA	102773811	102766109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_48619.known	chr13	-	828	4	FSM	ENSG00000151287.17	ENST00000376022.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	61.5377029867779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-10	True	NA	-1	True	ATTAAA	-23	NA	102773755	102766109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102773681
transcript_48622.known	chr13	-	2029	10	FSM	ENSG00000134901.13	ENST00000376004.5	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	10.3112068961068	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTGTGCTAATTATTA	17	True	NA	-1	True	AATAAA	-21	NA	102798976	102784280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102784513_102786231_102786340_102787833_102787924_102789011_102789222_102790900_102791139_102791257_102791431_102793340_102793419_102793600_102793807_102796803_102797010_102798488
transcript_48625.known	chr13	+	3888	15	FSM	ENSG00000134899.24	ENST00000652225.2	3888	15	0	0	0	0	multi-exon	FALSE	non_canonical	3	56	junction_8	14.2148241104066	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTAGTGTGTGGTT	-33	True	NA	12	True	AATAAA	-20	NA	102846031	102875995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_48630.known	chr13	+	3789	11	FSM	ENSG00000134897.14	ENST00000257336.6	3789	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	8.93532316147547	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGAATGTTTTTAAAC	-28	True	NA	15	True	AATAAA	-21	NA	102799118	102841533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102799522_102805306_102805391_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
transcript_48642.known	chr13	+	4024	15	FSM	ENSG00000134899.24	ENST00000652613.1	4024	15	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	26.9254450629276	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAACTGGTGGCACGG	17	False	NA	-10	True	AATGAA	-20	NA	102845866	102875973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102846355_102852124_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_48644.nic	chr13	-	1808	5	NIC	ENSG00000134884.15	novel	821	5	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	566.178637887372	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	2240	False	NA	-11	True	AATAAA	-35	NA	106568178	106543326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_106544161_106557047_106557132_106557558_106557617_106559431_106559658_106567572
transcript_48650.known	chr13	-	3363	4	FSM	ENSG00000134884.15	ENST00000400198.8	3363	4	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	228.792482393981	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	1	True	NA	NA	False	TATAAA	-17	NA	106568137	106541672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_106544161_106557047_106557132_106559431_106559658_106567572
transcript_48653.known	chr13	-	4009	3	FSM	ENSG00000134884.15	ENST00000472226.2	4009	3	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_2	16.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	1	True	NA	-11	True	AATAAA	-35	NA	106568137	106543326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_106544161_106557047_106559658_106567572
transcript_48655.nic	chr13	-	680	2	ISM	ENSG00000134884.15	ENST00000360629.3	361	4	-555	2478	-41	-2478	5prime_fragment	FALSE	canonical	3	1175	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGAGGAAGAACTGGAG	2240	False	NA	-20	True	AAGAAA	-34	NA	106568178	106559583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_106559658_106567572
transcript_48656.nnic	chr13	+	851	3	NNC	ENSG00000272274.3	novel	948	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	7	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATTTTGTTCAAAAGTAT	-5	True	NA	NA	False	AATAAA	-14	NA	106568257	106574138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_106568343_106568435_106568573_106573509
transcript_48657.known	chr13	-	9264	3	FSM	ENSG00000204442.4	ENST00000375915.4	9264	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTACGCCTTATTTC	-11	True	NA	NA	False	ATTAAA	-38	NA	107867496	107163509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_107170787_107210583_107210756_107865681
transcript_48659.known	chr13	-	3981	3	FSM	ENSG00000174405.15	ENST00000442234.6	3981	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	-1	True	NA	NA	False	AATAAA	-22	NA	108215536	108207441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_108211297_108214537_108214611_108215483
transcript_48660.known	chr13	+	5313	2	FSM	ENSG00000139826.6	ENST00000375898.4	5313	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTCTTCAGATAGTTT	-8	True	NA	11	True	AATAAA	-21	NA	108218391	108234243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_108218660_108229198
transcript_48665.known	chr13	-	8156	2	FSM	ENSG00000185950.9	ENST00000375856.5	8156	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTTTAAATTACGGT	-5	True	NA	NA	False	AATAAA	-18	NA	109786583	109752694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_109756309_109782041
transcript_48666.known	chr13	-	6540	52	FSM	ENSG00000187498.16	ENST00000375820.10	6540	52	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_48	130.977524331643	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTTTATTTTGCACT	-1	True	NA	-5	True	AATAAA	-23	NA	110307157	110148962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110150445_110152333_110152507_110155282_110155398_110161191_110161370_110162229_110162443_110163462_110163562_110164861_110164991_110166231_110166304_110167157_110167231_110169628_110169763_110170546_110170733_110172719_110172771_110173899_110173999_110174445_110174527_110174622_110174750_110175217_110175358_110176423_110176514_110176625_110176725_110176884_110177038_110177841_110177932_110178063_110178232_110178922_110179037_110179270_110179422_110181291_110181390_110182992_110183098_110183183_110183277_110186384_110186554_110187137_110187330_110192213_110192285_110192829_110192914_110195022_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_48684.nic	chr13	-	3277	37	ISM	ENSG00000187498.16	ENST00000375820.10	6540	52	-9	26315	-9	3589	5prime_fragment	FALSE	canonical	3	328	junction_33	56.3616176528357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAAGGGCAGGCAGG	6974	False	NA	NA	False	NA	NA	NA	110307166	110175277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_110175358_110176423_110176514_110176625_110176725_110176884_110177038_110177841_110177932_110178063_110178232_110178922_110179037_110179270_110179422_110181291_110181390_110182992_110183098_110183183_110183277_110186384_110186554_110187137_110187330_110192213_110192285_110192829_110192914_110195022_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_48695.nic	chr13	-	2048	22	ISM	ENSG00000187498.16	ENST00000543140.6	2549	25	-575	4294	-549	2502	5prime_fragment	FALSE	canonical	3	328	junction_18	32.8371229554437	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAGAGAAAGGTAAGAAA	6434	False	NA	NA	False	NA	NA	NA	110307706	110195034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_48698.nic	chr13	-	934	13	ISM	ENSG00000187498.16	ENST00000543140.6	2549	25	-77	16689	-51	-1933	5prime_fragment	FALSE	canonical	3	328	junction_9	39.1897095336688	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTTCGCCACCAAGGG	6932	False	NA	NA	False	AAGAAA	-3	NA	110307208	110207429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_48699.known	chr13	-	2549	25	FSM	ENSG00000187498.16	ENST00000543140.6	2549	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.2481041659429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAAGTTAGTAATTTTC	7009	False	NA	NA	False	AATAAA	-21	NA	110307131	110190740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110191650_110192213_110192285_110192829_110192914_110195022_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_48711.known	chr13	+	6446	48	FSM	ENSG00000134871.19	ENST00000360467.7	6446	48	0	0	0	0	multi-exon	TRUE	canonical	3	385	junction_6	104.927507364467	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACACCCCAACCAGGCC	-1	True	NA	NA	False	NA	NA	NA	110307283	110513209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113_110462187_110462277_110462385_110465404_110465607_110466002_110466063_110467039_110467097_110469216_110469325_110472928_110473151_110478002_110478165_110480219_110480391_110482515_110482660_110484904_110485028_110485654_110485837_110489444_110489509_110489710_110489786_110491232_110491341_110492069_110492178_110493210_110493283_110495341_110495468_110501667_110501785_110503120_110503283_110503382_110503482_110503846_110503994_110504147_110504265_110506414_110506607_110507934_110508222_110511933
transcript_48754.nic	chr13	+	3748	33	ISM	ENSG00000134871.19	ENST00000360467.7	6446	48	-498	28246	-472	856	5prime_fragment	FALSE	canonical	3	385	junction_6	48.1481681245507	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTAAAGGAGAGAAAGG	973	False	NA	NA	False	AATGAA	-2	NA	110306785	110484963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113_110462187_110462277_110462385_110465404_110465607_110466002_110466063_110467039_110467097_110469216_110469325_110472928_110473151_110478002_110478165_110480219_110480391_110482515_110482660_110484904
transcript_48780.nic	chr13	+	1980	23	ISM	ENSG00000134871.19	ENST00000360467.7	6446	48	-50	51051	-24	-291	5prime_fragment	FALSE	canonical	3	385	junction_6	35.9999139117428	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTCCAGAACAATCAC	118	False	NA	NA	False	NA	NA	NA	110307233	110462158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113
transcript_48794.known	chr13	+	3108	18	FSM	ENSG00000134871.19	ENST00000650540.1	3108	18	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_6	34.291544651737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTCTGTGGCTTTCAAT	72	False	NA	NA	False	AATAAA	-31	NA	110307356	110448678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797
transcript_48802.nic	chr13	+	2326	3	ISM	ENSG00000134871.19	ENST00000480771.5	585	4	-28	18533	-19	-18533	5prime_fragment	FALSE	canonical	3	430	junction_2	14	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGTTACTAAACATAGCT	123	False	NA	NA	False	AAAACA	-21	NA	110307238	110310016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_110307529_110307859_110307948_110308068
transcript_48806.known	chr13	-	1507	2	FSM	ENSG00000139832.5	ENST00000267328.5	1507	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGACTGAACTGAC	-24	True	NA	-1	True	ATTAAA	-22	NA	110561722	110523065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110524198_110561347
transcript_48812.known	chr13	+	1191	10	FSM	ENSG00000213995.12	ENST00000679389.1	1191	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	51.5018877755412	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCTTGGACGGGGGAG	-5	True	NA	NA	False	AGTAAA	-2	NA	110615559	110638551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_48813.known	chr13	+	2515	10	FSM	ENSG00000213995.12	ENST00000680254.1	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	14.0905361813007	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-20	True	NA	11	True	ATTAAA	-23	NA	110615544	110639996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_48816.known	chr13	+	2692	10	FSM	ENSG00000213995.12	ENST00000309957.3	2692	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	64.8211213863026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	-6	True	NA	8	True	ATTAAA	-20	NA	110615627	110639993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_48817.known	chr13	+	2559	10	FSM	ENSG00000213995.12	ENST00000680505.1	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	47.0258662734184	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-6	True	NA	11	True	ATTAAA	-23	NA	110615627	110639996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_48818.nnic	chr13	+	2370	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	51.9278345398689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	4	True	NA	11	True	ATTAAA	-23	NA	110615568	110639996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110638377
transcript_48823.nic	chr13	+	2639	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-48	0	intron_retention	FALSE	canonical	3	156	junction_1	14.8739495427408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	NA	False	NA	11	True	ATTAAA	-23	NA	110615496	110639996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_48826.known	chr13	+	2377	9	FSM	ENSG00000213995.12	ENST00000470164.2	2377	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	55.515763527128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	26	True	NA	8	True	ATTAAA	-20	NA	110615590	110639993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_48842.known	chr13	+	2216	7	FSM	ENSG00000213995.12	ENST00000424185.7	2216	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.3105222077833	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	-10	True	NA	8	True	ATTAAA	-20	NA	110615554	110639993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_48849.nnic	chr13	+	2123	6	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	58.8747823775171	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-23	True	NA	11	True	ATTAAA	-23	NA	110615541	110639996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_48858.nnic	chr13	+	2199	5	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	36	junction_1	65.0845603810919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-23	True	NA	11	True	ATTAAA	-23	NA	110615541	110639996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_48875.nic	chr13	-	3030	15	NIC	ENSG00000134905.17	novel	1838	15	NA	NA	-47	0	intron_retention	FALSE	canonical	3	25	junction_2	95.6807243932035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	9173	False	NA	-9	True	ATTAAA	-14	NA	110706180	110641416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110641609_110642314_110642522_110644064_110644183_110644384_110644484_110645966_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_48877.known	chr13	-	1838	15	FSM	ENSG00000134905.17	ENST00000257347.9	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	34.4937882606627	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-7	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_48883.nic	chr13	-	2848	14	NIC	ENSG00000134905.17	novel	1838	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	213	junction_2	35.3531632792054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-7	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_48898.known	chr13	+	4697	2	FSM	ENSG00000153487.13	ENST00000333219.9	4697	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	17	True	NA	NA	False	AATAAA	-19	NA	110713699	110723339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110714286_110719228
transcript_48900.known	chr13	+	2870	2	FSM	ENSG00000153487.13	ENST00000375774.3	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCGTGCTTATGTGCGT	98	False	NA	14	True	AATAAA	-14	NA	110714981	110721071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110716009_110719228
transcript_48923.known	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	126.048562070339	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	118	False	110915091	-3	True	AATAAA	-16	NA	110915069	110878539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
transcript_48937.known	chr13	-	1193	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	248.929081266131	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	39	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
transcript_48940.known	chr13	-	997	5	FSM	ENSG00000088448.14	ENST00000465753.1	997	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	262.749405327586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCACCTTCGAGATGAG	8	True	NA	NA	False	NA	NA	NA	110915037	110892956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110893264_110900529_110900662_110906032_110906125_110910617_110910771_110914724
transcript_48941.nic	chr13	-	1311	5	NIC	ENSG00000088448.14	novel	997	5	NA	NA	-2	-18	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	254.461195469958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCACTGTGCCTGAATT	116	False	110915091	-18	True	ATTAAA	-6	NA	110915071	110892709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
transcript_48943.nnic	chr13	-	1217	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	-9	-18	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	269.780466305476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCACTGTGCCTGAATT	109	False	110915091	-18	True	ATTAAA	-6	NA	110915078	110892709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
transcript_48945.nic	chr13	-	1198	4	ISM	ENSG00000088448.14	ENST00000267339.6	2495	6	-43	14159	-43	-7	5prime_fragment	FALSE	canonical	3	259	junction_1	159.633608268713	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAATTTTTTTTTTTTT	75	False	NA	-7	True	ATTAAA	-17	NA	110915112	110892698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_110893264_110906032_110906125_110910617_110910771_110914724
transcript_48948.known	chr13	-	535	4	FSM	ENSG00000088448.14	ENST00000460846.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	277.929247591301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTTTCCATTTC	384	False	NA	NA	False	AATAAA	-18	NA	110914803	110905022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110905234_110906032_110906125_110910617_110910771_110914724
transcript_48950.nic	chr13	+	4937	21	NIC	ENSG00000102606.19	novel	5233	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_3	51.3881309253411	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	-19	True	NA	14	True	ATTAAA	-21	NA	111153649	111305731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
transcript_48963.nic	chr13	+	1867	3	ISM	ENSG00000102606.19	ENST00000491775.5	581	6	3	10804	3	-10804	5prime_fragment	FALSE	canonical	3	89	junction_1	13.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTATCTAAAGTTATGG	-19	True	NA	NA	False	AAAAAG	-21	NA	111153649	111206996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_111153722_111153904_111153992_111205288
transcript_48964.nic	chr13	+	2270	2	ISM	ENSG00000102606.19	ENST00000491775.5	581	6	3	61698	3	2140	5prime_fragment	FALSE	canonical	3	89	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATTGAATGTTAAAAAC	-19	True	NA	NA	False	NA	NA	NA	111153649	111156102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_111153722_111153904
transcript_48965.known	chr13	+	5032	20	FSM	ENSG00000102606.19	ENST00000375736.8	5032	20	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	50.3533772837346	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	-10	True	NA	14	True	ATTAAA	-21	NA	111153737	111305731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
transcript_48966.known	chr13	-	428	2	FSM	ENSG00000229520.2	ENST00000418660.2	1166	2	0	738	0	-738	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCAAACGGAGCGCGCT	NA	False	NA	NA	False	NA	NA	NA	112106882	112106094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112106239_112106598
transcript_48968.known	chr13	-	3879	22	FSM	ENSG00000126216.15	ENST00000261965.8	3879	22	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_9	19.0799725228818	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATTCGTTATTTCTTG	-4	True	NA	-11	True	ATTAAA	-16	NA	112588153	112485010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112486152_112489580_112489698_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_48973.known	chr13	-	2723	21	FSM	ENSG00000126216.15	ENST00000375669.7	2723	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	48.2755372833902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAAATCTCCTGCCCGTT	24	True	NA	NA	False	AATAAA	-25	NA	112588125	112498806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112498937_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_48983.known	chr13	-	2461	10	FSM	ENSG00000126216.15	ENST00000464139.5	2461	10	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	19.2353840616713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGAACTCTTCATGTGC	14	True	NA	NA	False	AATAAA	-21	NA	112588135	112546481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_48986.known	chr13	-	4111	23	FSM	ENSG00000126216.15	ENST00000649778.1	4111	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	65.8246637943284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAGCAATTATCTTT	NA	False	NA	-33	True	CATAAA	-35	NA	112588205	112485032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112486152_112489580_112489698_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112521662_112521865_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_48987.known	chr13	-	3590	1	FSM	ENSG00000277159.1	ENST00000613809.1	3590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGGGGAGTTTCTTGG	NA	False	NA	-3	True	AATAAA	-21	NA	112606417	112602827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112602800_112606400
transcript_48991.nic	chr13	+	5256	31	NIC	ENSG00000126217.21	novel	3648	30	NA	NA	-43	0	combination_of_known_junctions	TRUE	canonical	3	44	junction_20	11.1285918046964	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGCCTTTGTCTGTC	-27	True	NA	12	True	AATAAA	-15	NA	112894334	113098546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549_113096654_113096773
transcript_48992.known	chr13	+	3648	30	FSM	ENSG00000126217.21	ENST00000375608.7	3648	30	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_20	11.2878245098022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCGGCGCCGGAGACC	16	True	NA	NA	False	NA	NA	NA	112894377	113096861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549
transcript_48994.known	chr13	+	6427	30	FSM	ENSG00000126217.21	ENST00000535094.7	6427	30	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	15.9808148950133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAACACCTTTCTGCCA	-7	True	NA	10	True	AATAAA	-24	NA	112969213	113099742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_112969459_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549_113096654_113096773
transcript_49.known	ERCC-00143	+	767	1	FSM	ERCC-00143A	DQ668362	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00143_+_0_800
transcript_49001.nic	chr13	+	1637	3	NIC	ENSG00000126217.21	novel	1544	2	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	35.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCATTTGTTGTTCT	-27	True	NA	NA	False	TATAAA	-15	NA	112894334	112910619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_112894432_112902198_112902372_112909252
transcript_49002.known	chr13	+	3063	8	FSM	ENSG00000057593.14	ENST00000346342.8	3063	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.39970842444753	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTGTCCATGGAGTGG	0	True	NA	NA	False	AATAAA	-21	NA	113105790	113120685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113105906_113110689_113110851_113113751_113113777_113113846_113113961_113115659_113115801_113116765_113116876_113117472_113117597_113118412
transcript_49007.known	chr13	+	1450	8	FSM	ENSG00000126218.12	ENST00000409306.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	33.7499811035472	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGCCAAGAGCCATG	-10	True	NA	-45	True	GGGGCT	-2	NA	113122813	113149462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147493_113148915
transcript_49012.known	chr13	+	4037	20	FSM	ENSG00000139842.15	ENST00000375441.7	4037	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	298.096426050996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACACATTCTTCATAA	NA	False	NA	38	True	AATAAA	-15	NA	113208192	113265072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113208608_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113233176_113233340_113233896_113233987_113235062_113235146_113236822_113236891_113239432_113239552_113242967_113243161_113244409_113244515_113244948_113245060_113245151_113245238_113245955_113246064_113253081_113253196_113254692_113254799_113254952_113255126_113260606_113260760_113263486
transcript_49015.known	chr13	+	5821	20	FSM	ENSG00000139842.15	ENST00000375440.9	5821	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	261.517349519536	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGACCCGTTGCCCCT	-3	True	NA	10	True	AATATA	-17	NA	113209612	113267108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113233176_113233340_113233896_113233987_113235062_113235146_113236822_113236891_113239432_113239552_113242967_113243161_113244409_113244515_113244948_113245060_113245151_113245238_113245955_113246064_113253081_113253196_113254692_113254799_113254952_113255126_113260606_113260760_113263486
transcript_49028.known	chr13	-	1668	15	FSM	ENSG00000126226.22	ENST00000375459.5	1668	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	286.694141224136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-6	True	NA	-17	True	AATAAA	-20	NA	113208106	113177611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208023
transcript_49029.known	chr13	-	1654	15	FSM	ENSG00000126226.22	ENST00000375477.5	1654	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	243.147641383181	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	2	True	NA	-16	True	AATAAA	-21	NA	113208666	113177610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_49030.known	chr13	-	1937	15	FSM	ENSG00000126226.22	ENST00000622406.4	1937	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	242.961836677353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTATGGCTCACTCTA	NA	False	NA	56	True	AATACA	-19	NA	113208715	113177538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196226_113197018_113197244_113198190_113198265_113200426_113200517_113208598
transcript_49033.known	chr13	-	1671	15	FSM	ENSG00000126226.22	ENST00000375479.6	1671	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	236.556687342655	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	NA	False	NA	-16	True	AATAAA	-21	NA	113208715	113177610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_49039.known	chr13	-	2372	14	FSM	ENSG00000126226.22	ENST00000375457.2	2372	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	268.751419426553	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTTGTTGGTTAAAA	18	True	NA	-22	True	AATAAA	-15	NA	113208650	113177616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208023
transcript_49041.known	chr13	-	1897	14	FSM	ENSG00000126226.22	ENST00000337344.9	1897	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	208.704626929484	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGCTCACTCTAGCC	-1	True	NA	59	True	AATACA	-22	NA	113208669	113177535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_49056.known	chr13	+	1111	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	537.95219118431	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	-16	True	NA	75	True	CATAAA	-17	NA	113209599	113230212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
transcript_49058.nic	chr13	+	1260	5	ISM	ENSG00000139842.15	ENST00000488558.2	1111	6	-26	-1	-26	1	intron_retention	FALSE	canonical	0	0	junction_3	536.929697446509	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGCTTTAAACCCAAG	460	False	NA	76	True	CATAAA	-18	NA	113209573	113230213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445
transcript_49067.known	chr13	+	2701	9	FSM	ENSG00000185896.11	ENST00000332556.5	2701	9	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_6	32.6187733521664	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGGAATACTATGCAG	-10	True	NA	44	True	ATTAAA	-21	NA	113297238	113323672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113297496_113306484_113306607_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
transcript_49068.nnic	chr13	+	2444	9	NNC	ENSG00000185896.11	novel	2701	9	NA	NA	252	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	239.621022397869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTGGGCCTTGTCCTT	193	False	NA	24	True	AATAAA	-15	NA	113297490	113323425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_113297738_113306484_113306607_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
transcript_49074.nnic	chr13	+	2355	8	NIC	ENSG00000185896.11	novel	2701	9	NA	NA	-23	-5	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	237.872371884846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTGGGCCTTGTCCTT	10	False	NA	24	True	AATAAA	-15	NA	113297215	113323425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113297496_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
transcript_49079.known	chr13	-	1415	8	FSM	ENSG00000139835.14	ENST00000375431.9	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	57.4203974282339	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-19	True	NA	-2	True	NA	NA	NA	113364130	113324162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_49086.nnic	chr13	-	1286	7	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_5	99.2790679515744	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-7	True	NA	-2	True	NA	NA	NA	113364160	113324162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761_113363911_113364019
transcript_49090.known	chr13	-	1834	7	FSM	ENSG00000139835.14	ENST00000375430.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	31.2978522514813	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCTA	5	True	NA	NA	False	NA	NA	NA	113364148	113324844	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_4910.known	chr1	-	1488	12	FSM	ENSG00000117308.15	ENST00000374497.7	1488	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	118.253265116629	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	373	False	NA	-7	True	AATAAA	-21	NA	23800402	23795599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800386
transcript_49101.known	chr13	-	1073	6	FSM	ENSG00000139835.14	ENST00000620217.4	1073	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	141.455858839427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTGAGTGGTCACTGA	5	True	NA	-3	True	NA	NA	NA	113364148	113324163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113324578_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_49107.nic	chr13	-	1767	6	NIC	ENSG00000139835.14	novel	1834	7	NA	NA	-12	66	intron_retention	FALSE	canonical	3	295	junction_1	34.2087708051605	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGGTGGCTC	-7	True	NA	NA	False	AATACA	-5	NA	113364160	113324995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_4911.known	chr1	-	1516	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	93.110260772683	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	0	True	NA	-6	True	AATAAA	-22	NA	23800754	23795598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_49116.nic	chr13	-	1898	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	-12	940	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	156.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGGTTCTGTTTGTGT	-7	True	NA	-9	True	ATTAAA	-25	NA	113364160	113358676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113360285_113363761_113363911_113364019
transcript_49117.known	chr13	-	877	3	FSM	ENSG00000139835.14	ENST00000476439.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTTTCTCTTAAATACA	-20	True	NA	NA	False	NA	NA	NA	113364131	113359616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113360285_113363761_113363911_113364071
transcript_49118.nic	chr13	-	2007	2	ISM	ENSG00000139835.14	ENST00000476439.1	877	3	-29	-940	-12	940	intron_retention	FALSE	canonical	3	80	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGGTTCTGTTTGTGT	-7	True	NA	-9	True	ATTAAA	-25	NA	113364160	113358676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_113360285_113363761
transcript_49119.nnic	chr13	-	2020	7	Fusion	ENSG00000150401.15_ENSG00000153531.15	novel	1877	7	NA	NA	-2	0	multi-exon	TRUE	canonical	1	1	junction_6	2.62995563967658	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCTTGGCCGCTTG	1	True	NA	NA	False	AATAAA	-22	NA	113490953	113421939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr13_-_113422980_113424216_113424350_113425051_113425180_113428951_113429093_113433741_113433868_113444424_113444590_113490666
transcript_49121.nic	chr13	-	3398	8	NIC	ENSG00000150401.15	novel	3164	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	35.4832527326596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	12	True	NA	-1	True	ATTAAA	-16	NA	113490691	113455818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490432
transcript_49122.known	chr13	-	3164	8	FSM	ENSG00000150401.15	ENST00000375403.6	3164	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	28.444001555509	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	12	True	NA	-1	True	ATTAAA	-16	NA	113490691	113455818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_49130.known	chr13	-	3032	7	FSM	ENSG00000150401.15	ENST00000478244.6	3032	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	32.7740581693645	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-8	True	NA	-1	True	ATTAAA	-16	NA	113490711	113455818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_49132.nnic	chr13	-	3451	7	NIC	ENSG00000150401.15	novel	3032	7	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_6	32.5098275739643	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	NA	False	NA	-1	True	ATTAAA	-16	NA	113490990	113455818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484197_113490666
transcript_49140.known	chr13	+	3058	13	FSM	ENSG00000150403.18	ENST00000434316.7	3058	13	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_11	75.7318001605373	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	-47	True	NA	22	True	ATTAAA	-16	NA	113491020	113550229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113547299_113547380_113548302_113548453_113549424
transcript_49144.nnic	chr13	+	3293	12	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	-315	0	combination_of_known_splicesites	FALSE	canonical	3	65	junction_10	109.107422992508	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	NA	False	NA	22	True	ATTAAA	-16	NA	113490705	113550229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113548302_113548453_113549424
transcript_49164.known	chr13	+	2843	9	FSM	ENSG00000150403.18	ENST00000474393.5	2843	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_8	48.3074463721692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTTCTGCTTACCGAG	28	True	NA	10	True	AATAAA	-15	NA	113491095	113535286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044
transcript_49177.known	chr13	+	2639	12	FSM	ENSG00000198176.13	ENST00000375370.10	2639	12	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_11	59.7157177144239	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	30	True	NA	13	True	AATAAA	-24	NA	113584752	113641473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_49183.known	chr13	-	2508	15	FSM	ENSG00000183087.15	ENST00000327773.7	2508	15	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	18.3710342103863	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCGTGGCCGTCATCTG	5	True	NA	-3	True	AATAAA	-23	NA	113864076	113820548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113821019_113821957_113822187_113823374_113823551_113826995_113827165_113828546_113828712_113832298_113832489_113832633_113832753_113834550_113834673_113835512_113835636_113838068_113838192_113839727_113839851_113846526_113846590_113848025_113848051_113863574_113863742_113863832
transcript_49190.known	chr13	+	6117	9	FSM	ENSG00000184497.13	ENST00000375353.5	6117	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_7	10.1111015720346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCGTATTACGTGAAGT	-24	True	NA	NA	False	TTTAAA	-16	NA	113759225	113816995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_49192.known	chr13	+	694	5	FSM	ENSG00000184497.13	ENST00000488362.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4.9749371855331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	-10	True	NA	9	True	ATTAAA	-17	NA	113759239	113799660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338
transcript_49194.known	chr13	-	2646	1	FSM	ENSG00000183087.15	ENST00000608763.1	2646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCGTGGCCGTCATCTG	NA	False	NA	-3	True	AATAAA	-23	NA	113823194	113820548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113820500_113823200
transcript_49195.known	chr13	-	2169	9	FSM	ENSG00000183087.15	ENST00000610073.1	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	19.2284782289187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACCGCGTGGCCGTCAT	3985	False	NA	-6	True	AATAAA	-20	NA	113836044	113820551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113821019_113821957_113822187_113823374_113823551_113826995_113827165_113828546_113828712_113832298_113832489_113832633_113832753_113834550_113834673_113835512
transcript_49196.known	chr13	+	1952	2	FSM	ENSG00000272695.2	ENST00000608651.1	1952	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCCATCGTGTGG	-12	True	NA	NA	False	AATAAA	-18	NA	113864167	113866833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113864296_113865009
transcript_49200.known	chr13	-	4203	24	FSM	ENSG00000185989.11	ENST00000334062.8	4203	24	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	8.64638215588655	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGCCTTGGTTTTCCAG	-34	True	NA	-1	True	ATTAAA	-23	NA	114132623	113977782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113979423_113981674_113981859_113992484_113992589_113996530_113996740_113999584_113999668_114000825_114000933_114007532_114007607_114009386_114009465_114011170_114011249_114013141_114013249_114015208_114015333_114016196_114016272_114017236_114017352_114018103_114018253_114018762_114018920_114021403_114021509_114024278_114024356_114027388_114027462_114027846_114027928_114029810_114029888_114040999_114041095_114052051_114052156_114073719_114073838_114132434
transcript_49204.nnic	chr13	-	4073	23	NIC	ENSG00000185989.11	novel	4203	24	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	23.0526257445656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGCCTTGGTTTTCCAG	-22	True	NA	-1	True	ATTAAA	-23	NA	114132611	113977782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113979423_113981674_113981859_113992484_113992589_113996530_113996740_113999584_113999668_114000825_114000933_114007532_114007607_114009386_114009465_114011170_114011249_114013141_114013249_114015208_114015333_114016196_114016272_114017236_114017352_114018103_114018253_114018762_114018920_114021403_114021509_114024278_114024356_114027388_114027462_114027846_114027928_114029810_114029888_114040999_114041095_114052051_114052156_114132434
transcript_49209.known	chr13	+	2034	19	FSM	ENSG00000130177.16	ENST00000252457.9	2034	19	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.8259256396272	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	7	False	NA	14	True	AATAAA	-15	NA	114235060	114272675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_49212.known	chr13	+	2331	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	39.3163022968536	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	12	True	NA	8	True	AATAAA	-18	NA	114234896	114272723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_49216.known	chr13	+	2058	18	FSM	ENSG00000130177.16	ENST00000628084.2	2058	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	107.259701652652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	2	True	NA	14	True	AATAAA	-15	NA	114234886	114272675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_49218.nnic	chr13	+	2167	18	NIC	ENSG00000130177.16	novel	2211	19	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	99.1410166201184	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	-9	True	NA	14	True	AATAAA	-15	NA	114234875	114272675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_49220.known	chr13	+	1991	17	FSM	ENSG00000130177.16	ENST00000252458.6	1991	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	124.002000361889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	10	False	NA	8	True	AATAAA	-18	NA	114235080	114272723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_49222.nnic	chr13	+	2244	17	NIC	ENSG00000130177.16	novel	2331	18	NA	NA	-11	-5	intron_retention	FALSE	canonical	3	56	junction_1	89.1290321668535	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTATGTCTTTTTT	-9	True	NA	9	True	AATAAA	-10	NA	114234875	114272670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_49228.known	chr13	+	2370	10	FSM	ENSG00000169062.15	ENST00000375299.8	2370	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	103.123562466599	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGAATCTGTGTCA	1	True	NA	8	True	AATAAA	-25	NA	114281600	114305817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_49232.nic	chr13	+	1034	7	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-197	14073	-197	0	5prime_fragment	FALSE	canonical	3	172	junction_1	116.141317176772	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	NA	False	NA	53	True	AAAAAG	-35	NA	114281403	114291744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_49235.nnic	chr13	+	1712	6	NNC	ENSG00000169062.15	novel	2370	10	NA	NA	0	163	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	145.719456490889	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAATAGTCCGTTCACTT	1	True	NA	12	True	AATAAA	-16	NA	114281600	114287780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114286738
transcript_49237.nnic	chr13	+	992	6	NNC	ENSG00000169062.15	novel	2370	10	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	141.046091757269	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACATTGTTTATCATTTA	-13	True	NA	6	True	AATAAA	-18	NA	114281586	114287620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114287312
transcript_49240.known	chr13	+	699	6	FSM	ENSG00000169062.15	ENST00000484246.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	157.83966548368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAATTGCAGAGAAA	11	True	NA	66	True	GATAAA	-2	NA	114281644	114291757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114281847_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_49242.nic	chr13	+	1019	6	NIC	ENSG00000169062.15	novel	2370	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	251	junction_2	95.2504068232782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	-7	True	NA	53	True	AAAAAG	-35	NA	114281592	114291744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_49246.nic	chr13	+	1660	5	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-2	18200	-2	0	5prime_fragment	FALSE	canonical	3	172	junction_1	109.497431476725	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACATTGTTTATCAT	-1	True	NA	3	True	AATAAA	-15	NA	114281598	114287617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518
transcript_4925.nic	chr1	-	1567	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	-150	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	97.5356345137509	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	NA	False	NA	-6	True	AATAAA	-22	NA	23800931	23795598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365_23799437_23800711
transcript_49253.nic	chr13	+	613	5	ISM	ENSG00000169062.15	ENST00000480362.5	965	8	180	13205	-25	0	internal_fragment	FALSE	canonical	3	222	junction_2	102.716843798863	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	223	False	NA	53	True	AAAAAG	-35	NA	114281899	114291744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633
transcript_49263.known	chr13	+	1210	3	FSM	ENSG00000169062.15	ENST00000618700.4	1210	3	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATCAGTACTTCTAGGG	3	True	NA	NA	False	NA	NA	NA	114281636	114283729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114281847_114282020_114282128_114282836
transcript_49268.known	chr13	+	494	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	3	True	NA	NA	False	AATAAA	-16	NA	114281602	114282270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114281847_114282020
transcript_49271.known	chr13	+	615	3	FSM	ENSG00000198824.7	ENST00000478022.3	615	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	22	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGGTGTTCAGTCTTTC	20	True	NA	58	True	AGTAAA	-19	NA	114314530	114322441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114314644_114321109_114321233_114322062
transcript_49272.known	chr13	+	3799	3	FSM	ENSG00000198824.7	ENST00000361283.4	3799	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	19.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACATCTTCATGTGTGTT	-8	True	NA	15	True	ATTAAA	-20	NA	114314502	114327322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114314644_114321109_114321233_114323787
transcript_49276.known	chr14	-	4737	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	13.3175832901979	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTTCATTTTCTT	-1	True	NA	1	True	TATAAA	-34	NA	20305951	20286226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
transcript_49277.known	chr14	-	1755	10	FSM	ENSG00000136319.12	ENST00000383029.7	1755	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	67.7655726715725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGTAGTTTGGCCTGC	9	True	NA	NA	False	ATTAAA	-23	NA	20305941	20289130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300674_20300819_20301832_20301966_20305886
transcript_49283.known	chr14	-	682	3	FSM	ENSG00000136319.12	ENST00000557379.1	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAGATGGCAGCAAGAA	-3	True	NA	NA	False	AAGAAA	-40	NA	20305953	20300336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20300819_20301832_20301966_20305886
transcript_49285.known	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	183.496972424312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	301	False	NA	-10	True	AATAAA	-22	NA	20333010	20311367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
transcript_49286.known	chr14	-	1470	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	119.686627861632	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	3	True	NA	-12	True	AATAAA	-20	NA	20333279	20311369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_49288.known	chr14	-	1305	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	196.419347315889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-1	True	NA	-10	True	AATAAA	-22	NA	20333312	20311367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
transcript_49291.known	chr14	+	1827	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_8	31.1508159336691	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	10	True	NA	14	True	AATAAA	-16	NA	20343634	20357904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_49293.known	chr14	+	1886	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	85.702482785247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	-10	True	NA	14	True	AATAAA	-16	NA	20343614	20357904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_49294.nic	chr14	+	1956	15	ISM	ENSG00000129484.14	ENST00000429687.8	1827	16	-13	1	-6	0	intron_retention	FALSE	canonical	3	242	junction_8	31.5762762923337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTTCTTCGGGCT	-3	True	NA	13	True	AATAAA	-15	NA	20343621	20357903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395
transcript_49321.known	chr14	-	1976	11	FSM	ENSG00000092094.11	ENST00000206542.9	1976	11	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_6	18.0177690072883	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCTACTCCGTATACT	8	True	NA	NA	False	NA	NA	NA	20454812	20446400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454568
transcript_49322.nic	chr14	-	1593	11	NIC	ENSG00000092094.11	novel	1976	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_8	66.9674547821552	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTTGGTGATTGGA	6364	False	NA	-13	True	AATAAA	-20	NA	20455112	20447062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451994_20452150_20452328_20452449_20454568
transcript_4934.known	chr1	-	1563	11	FSM	ENSG00000117308.15	ENST00000459934.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.6477854331577	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCTCTGAAAGAGCTT	1	True	NA	-68	True	NA	NA	NA	23800753	23795660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_49341.known	chr14	-	1011	2	FSM	ENSG00000092094.11	ENST00000556439.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACTCCATCTCAATTT	-16	True	NA	NA	False	NA	NA	NA	20455089	20451958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20452449_20454568
transcript_49342.known	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	77.454646227468	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	11	False	NA	-16	True	AATAAA	-17	NA	20461465	20457857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
transcript_49343.known	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	56.1735900777422	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-3	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
transcript_49352.known	chr14	+	1453	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	323.839755897882	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	-9	True	NA	18	True	AATAAA	-15	NA	20455225	20457767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_49353.known	chr14	+	952	5	FSM	ENSG00000100823.12	ENST00000555839.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	851.872202856743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCGATCCAAGAATGTTG	4	True	NA	NA	False	NA	NA	NA	20455238	20457366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20457077
transcript_49355.known	chr14	+	899	5	FSM	ENSG00000100823.12	ENST00000553681.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_1	916.628162070095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTGGACTTATATGA	10	False	NA	NA	False	NA	NA	NA	20455200	20457342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455241_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_49356.known	chr14	+	1387	5	FSM	ENSG00000100823.12	ENST00000398030.8	1387	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	951.061085051849	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	-9	True	NA	18	True	AATAAA	-15	NA	20455225	20457767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455329_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_49358.known	chr14	+	740	5	FSM	ENSG00000100823.12	ENST00000557150.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1035.7905193619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGACTGGAGTACCGGCAG	30	False	NA	NA	False	NA	NA	NA	20455264	20457089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455329_20455577_20455774_20455913_20456102_20456667_20456861_20456990
transcript_49361.known	chr14	+	773	5	FSM	ENSG00000100823.12	ENST00000556054.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_1	916.628162070095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGAGGTCTGGTACGA	12	True	NA	NA	False	NA	NA	NA	20455246	20457074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455429_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_49365.known	chr14	+	898	4	FSM	ENSG00000100823.12	ENST00000555306.5	898	4	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	306.765201561209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAGGAAGGCCGGGTG	-9	True	NA	NA	False	NA	NA	NA	20455225	20457002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455577_20456102_20456667_20456861_20456990
transcript_49367.known	chr14	+	831	4	FSM	ENSG00000100823.12	ENST00000557365.1	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	971.559685362779	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTAGGCACCTCTAC	22	True	NA	NA	False	NA	NA	NA	20455256	20457302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455913_20456102_20456667_20456861_20456990
transcript_49370.known	chr14	+	654	4	FSM	ENSG00000100823.12	ENST00000554813.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	996.967513122781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCTGGCTTCCCGAAA	-20	True	NA	NA	False	NA	NA	NA	20455214	20457139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455339_20455913_20456102_20456667_20456861_20456990
transcript_49371.known	chr14	+	1603	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_2	117.995291808143	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCCACATGAAAATAAAG	-9	True	NA	-15	True	TTTAAA	-39	NA	20455225	20457734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
transcript_49372.known	chr14	+	1803	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	74	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	5	True	NA	-11	True	TTTAAA	-43	NA	20455239	20457738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20456102_20456667_20456861_20456990
transcript_49373.known	chr14	+	1477	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	30.2416930742973	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	-1	True	NA	57	True	AATAAA	-17	NA	20469405	20477089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
transcript_49378.known	chr14	+	2061	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-26	True	NA	NA	False	ATTAAA	-22	NA	20684559	20701216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20684759_20699354
transcript_49379.known	chr14	+	1222	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTCTCACTGATT	NA	False	NA	26	True	AATAAA	-27	NA	20684176	20694186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20684759_20693546
transcript_49380.known	chr14	+	1498	3	FSM	ENSG00000259171.1	ENST00000553909.1	1498	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTAAACCGAAGGTACC	1	True	NA	-9	True	AATAAA	-1	NA	20684586	20700576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20684759_20693546_20693651_20699354
transcript_49382.known	chr14	+	1529	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	138.651408279006	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	14	True	NA	-2	True	AATAAA	-5	NA	20990002	20997016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_49384.known	chr14	+	1539	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_13	81.8069599620035	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	-9	True	NA	17	True	AATAAA	-24	NA	20989979	20997035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_49385.known	chr14	+	1500	14	FSM	ENSG00000165792.18	ENST00000556670.6	1500	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_13	157.842105211236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	-2	True	NA	12	True	AATAAA	-19	NA	20989986	20997030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996811
transcript_49386.known	chr14	+	1605	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	135.274489464939	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	5	True	NA	-8	True	NA	NA	NA	20989993	20997010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_49390.known	chr14	+	1586	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	62.3698645180507	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	-9	True	NA	-9	True	NA	NA	NA	20989979	20997009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_49396.nic	chr14	+	2058	12	NIC	ENSG00000165792.18	novel	1586	13	NA	NA	-201	0	intron_retention	FALSE	canonical	3	472	junction_3	58.9545279315878	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	0	True	NA	-8	True	NA	NA	NA	20989771	20997010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20995234_20995900_20995952_20996208_20996293_20996526
transcript_49411.known	chr14	+	5893	24	FSM	ENSG00000165801.10	ENST00000298694.9	5893	24	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_20	59.6347420340435	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCAGAGTGGCTCCTC	11	True	NA	14	True	AATAAA	-25	NA	21070303	21090248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087319_21087464_21087967_21088099_21088829_21088877_21089013
transcript_49418.nic	chr14	+	5722	23	NIC	ENSG00000165801.10	novel	5893	24	NA	NA	-645	0	combination_of_known_junctions	FALSE	canonical	3	161	junction_20	39.7328891390853	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	8362	False	NA	21	True	ATTAAA	-15	NA	21069627	21089545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
transcript_4942.known	chr1	-	1801	10	FSM	ENSG00000117308.15	ENST00000481736.5	1801	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	102.594611559222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-6	True	NA	-6	True	AATAAA	-22	NA	23800781	23795598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798731_23799365_23799437_23800711
transcript_49443.nnic	chr14	+	3774	21	NIC	ENSG00000165801.10	novel	5893	24	NA	NA	-144	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	64.9537335339548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	25	False	NA	21	True	ATTAAA	-15	NA	21070128	21089545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_21070400_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
transcript_49475.known	chr14	-	2079	17	FSM	ENSG00000165795.25	ENST00000397853.7	2079	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_16	48.0245705342588	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9711	False	NA	-11	True	AATAAA	-17	NA	21025094	21016771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025028
transcript_49478.known	chr14	-	2122	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	51.3516902715967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	9029	False	NA	-2	True	AATAAA	-26	NA	21025776	21016762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
transcript_49485.known	chr14	-	2022	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_15	50.6173444142969	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	9700	False	NA	-12	True	AATAAA	-16	NA	21025105	21016772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
transcript_49486.known	chr14	-	2054	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	52.9815900940024	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGTCTAGGTGT	9029	False	NA	-3	True	AATAAA	-25	NA	21025776	21016763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_49489.known	chr14	-	2127	16	FSM	ENSG00000165795.25	ENST00000350792.7	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	56.377142728434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	8982	False	NA	-2	True	AATAAA	-26	NA	21025823	21016762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025676
transcript_49499.known	chr14	-	1980	15	FSM	ENSG00000165795.25	ENST00000554143.5	1980	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	56.1126781847135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	9700	False	NA	-12	True	AATAAA	-16	NA	21025105	21016772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025028
transcript_49500.known	chr14	-	2047	15	FSM	ENSG00000165795.25	ENST00000360463.7	2047	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	58.3826662142602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	8986	False	NA	-11	True	AATAAA	-17	NA	21025819	21016771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025676
transcript_49538.nnic	chr14	-	2811	5	NNC	ENSG00000165804.16	novel	3055	5	NA	NA	-301	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	117.832508247936	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-10	True	NA	-31	True	AATAAA	-21	NA	21094129	21090076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094029
transcript_49540.nnic	chr14	-	2852	5	NNC	ENSG00000165804.16	novel	3055	5	NA	NA	174	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	116.579104045279	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	9937	False	NA	-31	True	AATAAA	-21	NA	21094274	21090076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094133
transcript_49541.nic	chr14	-	2892	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	106.591216805138	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	9640	False	NA	-31	True	AATAAA	-21	NA	21094571	21090076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094390
transcript_49542.nic	chr14	-	2864	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	110.327920310319	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	9639	False	NA	-31	True	AATAAA	-21	NA	21094572	21090076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094419
transcript_49545.known	chr14	-	3055	5	FSM	ENSG00000165804.16	ENST00000360947.8	3055	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	82.0620953912341	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-31	True	NA	-31	True	AATAAA	-21	NA	21098655	21090076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21098311
transcript_49546.nic	chr14	-	4241	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	90	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	96.2782426096364	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	5	False	NA	-31	True	AATAAA	-21	NA	21104632	21090076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21103102
transcript_49548.known	chr14	-	2918	5	FSM	ENSG00000165804.16	ENST00000451119.6	2918	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	113.658479666059	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGGCCCTGTGTCTGTCT	NA	False	NA	-36	True	AATAAA	-16	NA	21104722	21090081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21104510
transcript_49556.nic	chr14	+	1900	3	ISM	ENSG00000165801.10	ENST00000555038.5	1796	4	-645	692	-645	-692	5prime_fragment	FALSE	canonical	3	216	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAACAGAAGAAAGAAGCG	8362	False	NA	NA	False	GGGGCT	-37	NA	21069627	21074861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_21070400_21073044_21073243_21073931
transcript_49557.known	chr14	-	654	3	FSM	ENSG00000165804.16	ENST00000555697.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	83	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGCCGTGAGCGCAGGG	1058	False	NA	NA	False	NA	NA	NA	21103579	21093202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21093291_21093585_21093675_21103102
transcript_49558.known	chr14	-	567	3	FSM	ENSG00000165804.16	ENST00000554923.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCGCCCACGTAGTCCT	-8	True	NA	NA	False	NA	NA	NA	21094535	21092971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21093305_21093585_21093675_21094390
transcript_49559.known	chr14	-	798	3	FSM	ENSG00000165804.16	ENST00000555270.5	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	100	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGGCTCCCGAGCGTCCC	9711	False	NA	NA	False	NA	NA	NA	21094500	21092662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21093291_21093585_21093675_21094419
transcript_49565.known	chr14	-	2513	1	FSM	ENSG00000165804.16	ENST00000624093.1	2513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTCTGCCTCATATT	421	False	NA	NA	False	ATTAAA	-16	NA	21104216	21101703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21101700_21104200
transcript_49566.known	chr14	-	2162	16	FSM	ENSG00000165795.25	ENST00000553503.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_15	59.8917542089245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9766	False	NA	-11	True	AATAAA	-17	NA	21025039	21016771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21024848
transcript_49567.known	chr14	+	4902	23	FSM	ENSG00000165801.10	ENST00000556399.5	4902	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.8106699331742	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCTAGAGTAGTCCTC	-2	True	NA	31	True	ATTAAA	-25	NA	21070290	21089555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21070400_21073044_21073243_21073931_21074992_21075331_21075500_21075622_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
transcript_49574.known	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	2639.84309765693	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	5	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
transcript_49590.known	chr14	-	1714	9	FSM	ENSG00000092199.19	ENST00000555309.5	1714	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	2427.08718168507	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	9	True	NA	-92	True	NA	NA	NA	21269421	21210612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
transcript_49592.known	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	2080.07998644283	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	52	False	NA	-92	True	NA	NA	NA	21269404	21210612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_49608.nic	chr14	-	1736	8	NIC	ENSG00000092199.19	novel	3165	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1921	junction_7	1694.30581775594	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	-12	True	NA	-29	True	AATAAA	-36	NA	21269442	21210549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_49610.known	chr14	-	1790	8	FSM	ENSG00000092199.19	ENST00000553753.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	4459	junction_7	927.078734300295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATTAAACCAGGAAT	53	False	NA	-61	True	AATAAA	-4	NA	21269403	21210581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_49611.known	chr14	-	1371	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_5	2312.16265051769	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	5	True	NA	-9	True	AATAAA	-19	NA	21269425	21210936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
transcript_49618.known	chr14	-	3301	7	FSM	ENSG00000092199.19	ENST00000336053.10	3301	7	0	0	0	0	multi-exon	FALSE	canonical	3	1921	junction_6	1737.71091445678	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTAACTTTTTTTATT	NA	False	NA	0	True	ATTAAA	-31	NA	21269494	21209135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_49634.known	chr14	-	4433	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_10	155.60690987228	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-11	True	NA	-10	True	AATAAA	-32	NA	21384019	21351475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_49649.nic	chr14	-	1496	12	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-17	11765	-17	6108	5prime_fragment	FALSE	canonical	3	1760	junction_1	115.184293580346	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGAGTAAGTTTACTA	2	True	NA	32	True	NA	NA	NA	21384036	21363240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_49652.nic	chr14	-	1731	11	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-340	11962	-340	5911	5prime_fragment	FALSE	canonical	3	1785	junction_6	108.497741911986	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGGAAGAAGATAGATAAG	NA	False	NA	0	True	AAGAAA	-28	NA	21384359	21363437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_49657.nic	chr14	-	1215	9	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-23	13614	-23	4259	5prime_fragment	FALSE	canonical	3	1785	junction_4	108.505112206753	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATACAAACTGAAGAAAG	-4	True	NA	NA	False	NA	NA	NA	21384042	21365089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_49661.known	chr14	-	888	3	FSM	ENSG00000092201.10	ENST00000555752.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTGTCACTGTTGTCT	-5	True	NA	NA	False	NA	NA	NA	21384013	21372074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21372718_21373337_21373431_21383861
transcript_49662.nic	chr14	-	630	3	ISM	ENSG00000092201.10	ENST00000556217.5	1027	5	-218	2439	-209	200	5prime_fragment	FALSE	canonical	3	1889	junction_1	74.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCAGGATTAATAAAGAAT	NA	False	NA	4	True	NA	NA	NA	21384228	21371874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21372045_21373337_21373431_21383861
transcript_49665.known	chr14	-	915	2	FSM	ENSG00000092201.10	ENST00000555943.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTGAGAAAAATGATCA	-9	True	NA	0	True	AATAAA	-23	NA	21383981	21382974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21383770_21383861
transcript_49671.known	chr14	-	7422	38	FSM	ENSG00000100888.15	ENST00000645929.1	7422	38	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_36	24.39003137323	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCACTCTTCCTTTGTT	4	True	NA	-32	True	AATAAA	-14	NA	21456090	21385200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21431810_21431859_21456031
transcript_49674.known	chr14	-	8467	38	FSM	ENSG00000100888.15	ENST00000646647.2	8467	38	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_36	23.7391165328845	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTCTTCCTTTGTTCT	-29	True	NA	-30	True	AATAAA	-16	NA	21456123	21385198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21456031
transcript_49676.known	chr14	-	8259	39	FSM	ENSG00000100888.15	ENST00000643469.1	8259	39	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_38	26.2739667663619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAAAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21437308	21385494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21436900_21436966_21437193
transcript_49684.known	chr14	-	2815	5	FSM	ENSG00000100888.15	ENST00000643048.1	2815	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	22.4874965258474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAATACTCGTTTCCTCA	4	True	NA	NA	False	NA	NA	NA	21437273	21425323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21437193
transcript_49695.known	chr14	-	1980	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	75.923382432555	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-9	True	NA	-25	True	AATAAA	-21	NA	21511340	21498137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_49701.known	chr14	-	2030	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	147.916225873104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-9	True	NA	-49	True	TTTAAA	-1	NA	21511340	21498161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
transcript_49703.known	chr14	+	2000	9	FSM	ENSG00000092203.15	ENST00000455393.5	2000	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	150.772179131297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCTATGGAGCAGGGC	-16	True	NA	NA	False	NA	NA	NA	21477202	21496755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21477285_21477495_21477565_21487450_21487603_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
transcript_49706.known	chr14	+	4514	9	FSM	ENSG00000092203.15	ENST00000448790.7	4514	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	42.703739590345	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATTGCAATTCTAGC	-24	True	NA	20	True	AATAAA	-22	NA	21477194	21499170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
transcript_49710.nnic	chr14	-	2307	9	NNC	ENSG00000129472.15	novel	1318	9	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0950115932383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCATACTCCATGTGTC	NA	False	NA	-8	True	ATTAAA	-19	NA	21476987	21459022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_21460346_21460977_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_49711.known	chr14	-	1318	9	FSM	ENSG00000129472.15	ENST00000649801.1	1318	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	15.0950115932383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATATGTCTATTTATA	26	True	NA	NA	False	NA	NA	NA	21476909	21459667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21460341_21461238_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_49716.known	chr14	-	2124	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	153.692824734924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTAAATAAACATTT	21	True	NA	-60	True	NA	NA	NA	21511310	21498172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
transcript_49717.nic	chr14	-	2282	9	NIC	ENSG00000165819.12	novel	2030	10	NA	NA	-20	0	intron_retention	FALSE	canonical	3	350	junction_6	63.0396700498979	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGGATTCTGAAGTCCA	-31	True	NA	-33	True	AATAAA	-13	NA	21511362	21498145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_49718.nic	chr14	+	2724	8	ISM	ENSG00000092203.15	ENST00000448790.7	4514	9	0	2943	0	0	5prime_fragment	FALSE	canonical	3	372	junction_5	44.1361529814278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGAATGTAGCGG	-24	True	NA	NA	False	NA	NA	NA	21477194	21496227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228
transcript_49731.known	chr14	+	3766	6	FSM	ENSG00000092203.15	ENST00000673643.1	3766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.200836818252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGCAATTCTAGCC	-1	True	NA	21	True	AATAAA	-23	NA	21477217	21499171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21477285_21477495_21477565_21487450_21487647_21492613_21493258_21495228_21495393_21496545
transcript_49734.nic	chr14	+	738	5	ISM	ENSG00000092203.15	ENST00000448790.7	4514	9	0	9923	0	397	5prime_fragment	FALSE	canonical	3	411	junction_4	44.645828472546	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCTAATGAACCTCAGAA	-24	True	NA	NA	False	AAAAAG	-31	NA	21477194	21489247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172
transcript_49738.known	chr14	-	1592	4	FSM	ENSG00000165819.12	ENST00000536201.5	1592	4	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	70.2329457353646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCCTTTTTATTTTCCC	-9	True	NA	NA	False	NA	NA	NA	21511340	21501151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21501904_21503172_21503578_21503663_21503882_21511123
transcript_4974.known	chr1	-	598	4	FSM	ENSG00000117308.15	ENST00000466250.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.633328765872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATGGCACCACT	-7	True	NA	NA	False	NA	NA	NA	23800761	23798379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23798731_23798886_23799013_23799365_23799437_23800711
transcript_49740.known	chr14	+	3633	7	FSM	ENSG00000092203.15	ENST00000613005.4	3633	7	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_4	47.2710858300881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGAATGTAGCGG	-37	True	NA	NA	False	NA	NA	NA	21477181	21496227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21477285_21477495_21477565_21487450_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228
transcript_49742.known	chr14	-	1553	3	FSM	ENSG00000165819.12	ENST00000538267.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	63.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCTCTTATCTGAAG	2	True	NA	NA	False	NA	NA	NA	21511259	21502378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21503578_21503663_21503882_21511123
transcript_49743.known	chr14	-	545	2	FSM	ENSG00000165819.12	ENST00000545788.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTGGCACTGGGTGTT	-11	True	NA	NA	False	AATGAA	-36	NA	21511342	21510654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21510981_21511123
transcript_49748.nic	chr14	-	4364	3	NIC	ENSG00000165821.12	novel	3094	4	NA	NA	-9	0	intron_retention	FALSE	canonical	3	66	junction_1	283	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-6	True	NA	-3	True	ATTAAA	-16	NA	21537225	21521079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21522245_21522832_21525655_21536848
transcript_49759.known	chr14	-	1466	3	FSM	ENSG00000165821.12	ENST00000611430.4	1466	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	157.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAGTGTGCAGAGGTG	9886	False	NA	NA	False	NA	NA	NA	21526500	21521536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21522245_21525336_21525655_21526060
transcript_49760.known	chr14	-	1566	3	FSM	ENSG00000165821.12	ENST00000613414.4	1566	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	308	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTATGTGTTTCTCC	4	True	NA	-6	True	ATTAAA	-13	NA	21536934	21521082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21522245_21525336_21525655_21536848
transcript_49762.known	chr14	-	4861	2	FSM	ENSG00000165821.12	ENST00000537235.2	4861	2	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	6	True	NA	-3	True	ATTAAA	-16	NA	21526346	21521079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21525655_21526060
transcript_49763.known	chr14	-	553	2	FSM	ENSG00000165821.12	ENST00000541965.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTCCACCACCCCCTCC	-9	True	NA	NA	False	NA	NA	NA	21537104	21525244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21525655_21536961
transcript_49764.known	chr14	-	4942	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	0	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATGTGTTTCTCCTT	3	True	NA	-4	True	ATTAAA	-15	NA	21537216	21521080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21525655_21536848
transcript_49768.known	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1746	junction_2	46	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-27	True	NA	-12	True	ATTAAA	-20	NA	22589224	22564906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22565138_22575058_22575234_22588946
transcript_49769.known	chr14	-	441	2	FSM	ENSG00000129562.11	ENST00000538631.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGCCTCTGGCTCTGT	40	True	NA	-13	True	ATTAAA	-45	NA	22589157	22564907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22565138_22588946
transcript_4977.known	chr1	-	2151	10	FSM	ENSG00000117305.15	ENST00000374487.6	2151	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	100.166528008778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	7490	False	NA	-12	True	ATTAAA	-19	NA	23838620	23801886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23826083_23826184_23838063
transcript_49771.known	chr14	-	591	3	FSM	ENSG00000129562.11	ENST00000535847.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	918.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-23	True	NA	-12	True	ATTAAA	-20	NA	22589220	22564906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22565138_22575058_22575234_22589035
transcript_49779.known	chr14	+	3366	7	FSM	ENSG00000100439.11	ENST00000428304.7	3051	7	-63	-252	-53	252	multi-exon	FALSE	canonical	3	183	junction_1	30.4671954731642	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTCTTCTCTGA	8732	False	NA	NA	False	AATATA	-25	NA	22598236	22613215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_49781.nic	chr14	+	2544	7	NIC	ENSG00000100439.11	novel	3051	7	NA	NA	9	-2	intron_retention	FALSE	canonical	3	6	junction_1	90.5538513813742	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCGGTGGGGATGATGTT	29	False	NA	15	True	AATAAA	-15	NA	22598312	22612356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_22598443_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_49784.known	chr14	+	1003	6	FSM	ENSG00000100439.11	ENST00000418446.6	1003	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.6787737014567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAACAGGACGACAGTG	20	True	NA	NA	False	NA	NA	NA	22598303	22611074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22606421_22606534_22609723_22609911_22610858
transcript_49788.known	chr14	+	2806	10	FSM	ENSG00000155463.14	ENST00000612549.6	2806	10	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_5	38.0529196167393	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAAGTGTTCTGTTGTCT	-3	True	NA	NA	False	NA	NA	NA	22766687	22773042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_49789.known	chr14	+	1679	9	FSM	ENSG00000155463.14	ENST00000495424.5	1679	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	266.573131382366	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGAGTTAGTAAACCT	12	True	NA	-5	True	NA	NA	NA	22766702	22771754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769796_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_49793.known	chr14	-	2272	11	FSM	ENSG00000155465.20	ENST00000555702.5	2272	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	7.93977329651168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	9997	False	NA	-3	True	AATAAA	-17	NA	22819811	22773221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22819637
transcript_49796.known	chr14	-	2447	10	FSM	ENSG00000155465.20	ENST00000397532.9	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	5.22812904711937	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGAGTGGCTTCATT	13	True	NA	-6	True	AATAAA	-14	NA	22815803	22773224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319
transcript_49800.known	chr14	+	398	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	679.937680967896	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	28	False	NA	24	True	AATAAA	-26	NA	22829920	22834347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
transcript_49804.known	chr14	+	333	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_3	731.407015431369	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	20	False	NA	24	True	AATAAA	-26	NA	22829912	22834347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
transcript_49813.known	chr14	+	3701	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	0	0	0	0	multi-exon	TRUE	canonical	2	47	junction_5	7.09372875533883	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	-16	True	NA	13	True	AATAAA	-13	NA	22836584	22847758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_49826.known	chr14	+	3532	10	FSM	ENSG00000157227.14	ENST00000680097.1	3532	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.6977156035922	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	-16	True	NA	13	True	AATAAA	-13	NA	22836584	22847758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842578_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_49829.known	chr14	+	6892	7	FSM	ENSG00000197324.9	ENST00000359591.9	6892	7	0	0	0	0	multi-exon	TRUE	canonical	3	276	junction_4	24.5402164257413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGGCCATGACTGAG	-24	True	NA	NA	False	AATAAA	-19	NA	22871739	22881713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939
transcript_4983.known	chr1	-	1570	9	FSM	ENSG00000117305.15	ENST00000374490.8	1570	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	27.2304976083802	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	2	True	NA	-10	True	ATTAAA	-21	NA	23825429	23801884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_49832.known	chr14	+	1780	8	FSM	ENSG00000197324.9	ENST00000546834.5	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	107.180564793193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGGGGAGAGGGCT	146	False	NA	NA	False	NA	NA	NA	22872303	22879310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939_22877054_22879198
transcript_4984.known	chr1	-	1354	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	77.8897012162427	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	3	True	NA	-12	True	ATTAAA	-19	NA	23825428	23801886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_49848.known	chr14	+	1858	5	FSM	ENSG00000139890.10	ENST00000267396.9	1858	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.27200187265877	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCACTTTTGACTCTG	5	True	NA	9	True	AATAAA	-17	NA	22883221	22887678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22883391_22884673_22885016_22885265_22885340_22886023_22886232_22886613
transcript_49849.nic	chr14	+	2301	4	ISM	ENSG00000139890.10	ENST00000267396.9	1858	5	-61	0	-61	0	intron_retention	FALSE	canonical	3	12	junction_2	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCACTTTTGACTCTG	5756	False	NA	9	True	AATAAA	-17	NA	22883160	22887678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_22883391_22884673_22885016_22885265_22885340_22886023
transcript_4985.nnic	chr1	-	2250	8	NNC	ENSG00000179163.12	novel	2043	8	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	32.791238252351	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	-2	True	NA	3	True	AATAAA	-36	NA	23868323	23845076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867723
transcript_49853.nic	chr14	-	2215	18	NIC	ENSG00000100462.16	novel	2304	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	201.170914955968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-14	True	NA	-5	True	AATAAA	-20	NA	22929395	22920528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_22920732_22920839_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_49855.nic	chr14	-	2067	18	NIC	ENSG00000100462.16	novel	2304	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	192.670847206633	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-14	True	NA	-5	True	AATAAA	-20	NA	22929395	22920528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_22920732_22920987_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_4986.known	chr1	-	2043	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	7.92824967172092	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	31	True	NA	3	True	AATAAA	-36	NA	23868290	23845076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
transcript_49870.known	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_16	200.107432083369	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-20	True	NA	-1	True	AATAAA	-24	NA	22929401	22920524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
transcript_49871.known	chr14	-	2304	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_14	62.9522388402509	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	5	True	NA	-5	True	AATAAA	-20	NA	22929376	22920528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_49879.known	chr14	-	2271	16	FSM	ENSG00000100462.16	ENST00000216350.12	2271	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	279.503241881418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACCATGCTGCCCCCTGC	-10	True	NA	-6	True	AATAAA	-19	NA	22929391	22920529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929166
transcript_4988.known	chr1	+	814	3	FSM	ENSG00000189266.13	ENST00000374468.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	492	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGTTTAAATTTA	11	True	NA	NA	False	TATAAA	-3	NA	23959827	23961880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23959999_23960932_23961135_23961439
transcript_49880.known	chr14	-	1857	16	FSM	ENSG00000100462.16	ENST00000553897.5	1857	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	211.239979381008	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGCTTCAGGTTCTGC	NA	False	NA	NA	False	NA	NA	NA	22929408	22920875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929251
transcript_49892.known	chr14	-	10007	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	59.8731400496774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGGAGTGAGGGTTT	1	True	NA	NA	False	AATAAA	-19	NA	22919149	22893203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
transcript_49901.known	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	32.9363864981506	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	7245	False	NA	-32	True	CATAAA	-41	NA	22919182	22900765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_49911.known	chr14	-	1743	12	FSM	ENSG00000100461.18	ENST00000542016.6	1743	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	66.8529903149409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAAGGAAAACCCTTAG	7249	False	NA	NA	False	NA	NA	NA	22919178	22901335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22911327_22911404_22918998
transcript_49931.nic	chr14	-	1826	10	NIC	ENSG00000092036.19	novel	1642	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	37	junction_9	80.367827234043	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	NA	False	NA	-32	True	AATAAA	-12	NA	22957168	22946235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_49932.nnic	chr14	-	1783	10	NNC	ENSG00000092036.19	novel	1642	10	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_9	90.6360242336836	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	NA	False	NA	-32	True	AATAAA	-12	NA	22957172	22946235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956792
transcript_49933.known	chr14	-	1586	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_9	52.635011583968	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-6	True	NA	-24	True	AATAAA	-20	NA	22957090	22946227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_49937.known	chr14	-	1447	9	FSM	ENSG00000092036.19	ENST00000490506.5	1447	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	88.8874815426784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-10	True	NA	-24	True	AATAAA	-20	NA	22957094	22946227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22955099_22955177_22956915
transcript_49938.known	chr14	-	1626	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	98.2837092299634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTATCTCCTGAAT	4	True	NA	-66	True	NA	NA	NA	22957137	22946269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_49940.known	chr14	-	1454	9	FSM	ENSG00000092036.19	ENST00000555367.5	1454	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	75.7511344799535	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-6	True	NA	-57	True	NA	NA	NA	22957126	22946260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_49947.known	chr14	-	4168	8	FSM	ENSG00000129474.16	ENST00000262713.7	4168	8	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	23.2343869016137	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTGTGTAACTTTACA	0	True	NA	-1	True	ATTAAA	-38	NA	22982551	22971176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22973569_22974046_22974116_22974838_22974891_22974973_22975105_22976455_22976519_22976644_22976713_22978343_22978446_22981260
transcript_49960.known	chr14	-	751	2	FSM	ENSG00000129474.16	ENST00000553736.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGATCTTGCTGCATCT	1055	False	NA	-3	True	AATAAA	-19	NA	22981586	22978611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22979037_22981260
transcript_49961.known	chr14	-	1776	8	FSM	ENSG00000100802.15	ENST00000397377.5	1776	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	11.5864100548524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATAATGAGATGCTC	17	True	NA	37	True	GGGGCT	-2	NA	23010122	22987144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22998742_22999053_22999403_23010100
transcript_49963.known	chr14	-	1986	7	FSM	ENSG00000100802.15	ENST00000397382.8	1986	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	11.1716406832459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGTGCAGTCTGAGAAA	NA	False	NA	53	True	GGGGCT	-18	NA	23010166	22987128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999157_23010016
transcript_49964.known	chr14	-	3360	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	10.1598337694188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGTTCGACTTAGGATT	-4	True	NA	NA	False	AATAAA	-37	NA	23010143	22985893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
transcript_49969.known	chr14	-	1117	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	1449.53793404044	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	3	True	NA	-7	True	NA	NA	NA	23034890	23025857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
transcript_49974.known	chr14	-	444	3	FSM	ENSG00000100804.19	ENST00000555895.5	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1649	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTTGTTTGTTTGTTT	504	False	NA	-3	True	AATAAA	-16	NA	23034727	23016542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23016636_23033367_23033675_23034683
transcript_49979.known	chr14	-	796	3	FSM	ENSG00000100804.19	ENST00000334454.10	796	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	1731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCATGGATCGGGGCT	8	True	NA	NA	False	NA	NA	NA	23034885	23026296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23033367_23033675_23034475
transcript_49980.known	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3333	junction_2	71.5	4019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-7	True	NA	-5	True	NA	NA	NA	23034900	23025855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23033367_23033675_23034683
transcript_49982.known	chr14	-	900	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	1717.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	1	True	NA	-15	True	NA	NA	NA	23035230	23025901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23033367_23033675_23035111
transcript_49983.known	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-1	True	NA	-7	True	NA	NA	NA	23034894	23025857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23034683
transcript_49984.nnic	chr14	-	2765	14	NNC	ENSG00000139880.21	novel	3415	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.8630213297111	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-3	True	NA	-5	True	AATAAA	-21	NA	23057520	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23047375_23047460_23047514_23048163_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_49987.known	chr14	-	3552	14	FSM	ENSG00000139880.21	ENST00000397359.7	3552	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.9451634164864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTTCTGTTTTTGC	5	True	NA	0	True	AATAAA	-26	NA	23057538	23047061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23051969_23052084_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_49988.nnic	chr14	-	2596	13	NNC	ENSG00000139880.21	novel	3415	13	NA	NA	-129	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	24.3036348447442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	8655	False	NA	-5	True	AATAAA	-21	NA	23057667	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23047375_23047460_23047514_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_49992.known	chr14	-	3415	13	FSM	ENSG00000139880.21	ENST00000487137.7	3415	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	13.9880901722382	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-3	True	NA	-5	True	AATAAA	-21	NA	23057520	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_49995.nnic	chr14	-	2859	13	NNC	ENSG00000139880.21	novel	3415	13	NA	NA	-129	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0619636342326	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	8655	False	NA	-5	True	AATAAA	-21	NA	23057667	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23047375_23048163_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_49997.nnic	chr14	-	2219	12	NNC	ENSG00000139880.21	novel	3415	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	24.6402211002208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	4	True	NA	-5	True	AATAAA	-21	NA	23057539	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23047375_23047460_23047514_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_5.known	ERCC-00013	+	792	1	FSM	ERCC-00013A	EF011062	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00013_+_0_800
transcript_50.known	ERCC-00144	+	521	1	FSM	ERCC-00144A	DQ854995	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00144_+_0_500
transcript_50001.nic	chr14	-	4055	12	NIC	ENSG00000139880.21	novel	3415	13	NA	NA	-75	0	intron_retention	FALSE	canonical	3	49	junction_10	14.1128860875091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	8709	False	NA	-5	True	AATAAA	-21	NA	23057613	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23047375_23047460_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_50002.nnic	chr14	-	2487	12	NIC	ENSG00000139880.21	novel	3415	13	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	23.5607181133455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	8711	False	NA	-5	True	AATAAA	-21	NA	23057611	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23047375_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_50007.nnic	chr14	-	2166	11	NIC	ENSG00000139880.21	novel	3415	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.4409492450682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	4	True	NA	-5	True	AATAAA	-21	NA	23057539	23047066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23047375_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_50023.known	chr14	-	4173	19	FSM	ENSG00000100813.15	ENST00000555053.5	4173	19	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_15	189.105570162982	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGGTCTTTCACATC	9760	False	NA	NA	False	NA	NA	NA	23095383	23059058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064486_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
transcript_50027.known	chr14	-	4935	19	FSM	ENSG00000100813.15	ENST00000262710.5	4935	19	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_15	174.659925301063	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	9529	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
transcript_50029.nic	chr14	-	4316	18	NIC	ENSG00000100813.15	novel	4460	19	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	173.143519083713	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-16	True	NA	-3	True	AATAAA	-20	NA	23095148	23058563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
transcript_50031.known	chr14	-	4815	18	FSM	ENSG00000100813.15	ENST00000457657.5	4815	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_15	162.162505532851	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	9529	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
transcript_5004.known	chr1	-	1808	6	FSM	ENSG00000188529.15	ENST00000453840.7	1808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	602.195449999417	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTT	65	False	NA	-2	True	AATAAA	-23	NA	23980296	23966444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_50046.nic	chr14	-	2498	13	NIC	ENSG00000100813.15	novel	2563	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	179.179360015476	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-14	True	NA	-3	True	AATAAA	-20	NA	23071585	23058563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_50050.known	chr14	-	2563	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_12	154.709315240622	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	9051	False	NA	-6	True	AATAAA	-17	NA	23071617	23058566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_50053.nic	chr14	-	2738	12	NIC	ENSG00000100813.15	novel	2751	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	123	junction_8	151.910423801345	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-14	True	NA	-3	True	AATAAA	-20	NA	23071585	23058563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071124
transcript_50054.nic	chr14	-	2436	12	NIC	ENSG00000100813.15	novel	2563	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_11	167.092145608245	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-14	True	NA	-3	True	AATAAA	-20	NA	23071585	23058563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_50056.known	chr14	-	2738	12	FSM	ENSG00000100813.15	ENST00000397341.7	2738	12	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_11	111.571790622943	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTAGTTTTAAACTGT	6	True	NA	-19	True	AATAAA	-4	NA	23071565	23058579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124
transcript_50057.known	chr14	-	2445	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_11	133.049173784087	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	10	True	NA	-6	True	AATAAA	-17	NA	23071561	23058566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_50058.nnic	chr14	-	2331	12	NNC	ENSG00000100813.15	novel	4460	19	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	159.211694408305	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-14	True	NA	-3	True	AATAAA	-20	NA	23071585	23058563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071567
transcript_5006.known	chr1	-	866	6	FSM	ENSG00000188529.15	ENST00000374453.7	866	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	676.783392231222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAAGGTGCTGCAGT	67	False	NA	-82	True	AAAAAG	-34	NA	23980294	23967617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23967957_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_50077.known	chr14	+	725	2	FSM	ENSG00000179933.6	ENST00000554203.1	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCAATCTAAGCAATCCA	-6	True	NA	NA	False	NA	NA	NA	23095524	23098271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23095620_23097641
transcript_5008.known	chr1	-	2917	6	FSM	ENSG00000188529.15	ENST00000343255.9	2917	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	601.265864655561	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGATTAACTGGAAT	1	True	NA	NA	False	AATAAA	-14	NA	23980327	23969082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_50081.nic	chr14	-	3922	12	NIC	ENSG00000092068.21	novel	4236	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	768.968827619976	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGGTGTTGGTAAT	0	True	NA	27	True	AATAAA	-17	NA	23183660	23125296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763_23183039_23183350
transcript_50084.known	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	2430	junction_2	118.76619889514	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	0	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
transcript_50086.nnic	chr14	-	3149	10	NNC	ENSG00000092068.21	novel	4236	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	836.345489482533	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGGTGTTGGTAAT	-3	True	NA	27	True	AATAAA	-17	NA	23183663	23125296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165332_23183541
transcript_50089.known	chr14	-	1752	9	FSM	ENSG00000092068.21	ENST00000453702.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	879.768213437494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTCCCCATCATACC	-7	True	NA	NA	False	NA	NA	NA	23154401	23126667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23154258
transcript_50093.known	chr14	-	1499	8	FSM	ENSG00000092068.21	ENST00000528860.5	1499	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	1167.21884697545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCAAGGGGTCAGCTG	1	True	NA	NA	False	NA	NA	NA	23154393	23126758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23143078_23143205_23154258
transcript_50097.known	chr14	+	2145	10	FSM	ENSG00000258643.6	ENST00000678502.1	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	1552.26499583156	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTGTAAGGATTATTTA	-23	True	NA	29	True	AATAAA	-33	NA	23306832	23326175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23319734_23319831_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_50100.nnic	chr14	+	851	8	NNC	ENSG00000100836.11	novel	1811	7	NA	NA	-7	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1094.00022385552	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGACCTTGATGGA	-9	True	NA	83	True	ATTAAA	-18	NA	23321449	23325369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_23321516_23321688_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_50104.known	chr14	+	1811	7	FSM	ENSG00000100836.11	ENST00000216727.9	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_6	227.263430112868	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	-2	True	NA	17	True	AATAAA	-21	NA	23321456	23326163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_50106.known	chr14	+	2768	6	FSM	ENSG00000100836.11	ENST00000397276.6	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	2801	junction_1	191.38547489295	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	-2	True	NA	17	True	AATAAA	-21	NA	23321456	23326163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
transcript_50107.known	chr14	+	1220	6	FSM	ENSG00000100836.11	ENST00000556821.5	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_5	211.823133769662	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAGGAGAGAGAGGAAA	56	False	NA	12	True	AAAAAG	-7	NA	23321542	23325298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_50110.known	chr14	+	778	5	FSM	ENSG00000100836.11	ENST00000557702.5	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	3096	junction_1	106.491783720623	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTCCCCGTGGTCTTC	-3	True	NA	NA	False	NA	NA	NA	23322021	23324378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
transcript_50112.known	chr14	+	3526	4	FSM	ENSG00000129473.11	ENST00000250405.10	3526	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.79271573232759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAACAGGGTTTGTGA	-23	True	NA	17	True	AATAAA	-25	NA	23306832	23311751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23308815
transcript_50113.known	chr14	+	3539	4	FSM	ENSG00000129473.11	ENST00000679000.1	3539	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	11.2644968324772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTTTAATGAGAAGGAC	-5	True	NA	1	True	AATAAA	-9	NA	23306850	23311735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23306942_23307191_23307280_23307759_23308200_23308815
transcript_50115.known	chr14	-	4986	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGATGGAGTCTCGCTC	-18	True	NA	NA	False	NA	NA	NA	23286132	23272421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23277188_23285912
transcript_50117.nic	chr14	-	728	2	ISM	ENSG00000215271.9	ENST00000558278.1	563	3	-11	109	4	-109	5prime_fragment	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGATGTAGTGGTGAG	-14	True	NA	-7	True	ATTAAA	-20	NA	23286128	23285099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_23285612_23285912
transcript_50132.known	chr14	-	2455	10	FSM	ENSG00000092096.19	ENST00000397267.6	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	78.7527777287887	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTGGACTTCCCTCCC	NA	False	NA	-15	True	AATAAA	-26	NA	23352912	23346313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23346937_23347100_23347213_23347459_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
transcript_50136.nic	chr14	-	2268	10	NIC	ENSG00000092096.19	novel	2372	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_6	89.0361280535347	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATAGCCTGGACTTCCC	NA	False	NA	-19	True	AATAAA	-22	NA	23352908	23346317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348547_23349271_23349427_23351751_23351856_23351947_23352452_23352645
transcript_50142.known	chr14	-	2238	10	FSM	ENSG00000092096.19	ENST00000354772.10	2372	10	146	-12	119	8	multi-exon	TRUE	canonical	3	196	junction_6	45.7370368870774	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCCTCCCTTCTGTTT	147	False	NA	-7	True	AATAAA	-34	NA	23352741	23346305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
transcript_50160.known	chr14	-	2245	9	FSM	ENSG00000092096.19	ENST00000397260.7	2245	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	89.7116909884102	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTGGACTTCCCTCCC	-3	True	NA	-15	True	AATAAA	-26	NA	23352860	23346313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351947_23352452_23352645
transcript_50165.nnic	chr14	-	2284	9	NNC	ENSG00000092096.19	novel	2372	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	18	junction_5	93.8199738861614	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATAGCCTGGACTTCCC	NA	False	NA	-19	True	AATAAA	-22	NA	23352916	23346317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348356_23349271_23349427_23351751_23351856_23351947_23352452_23352645
transcript_5019.known	chr1	-	790	3	FSM	ENSG00000188529.15	ENST00000485292.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	718.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGTGATTGTGGTCT	-3	True	NA	NA	False	NA	NA	NA	23980331	23977789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23978274_23978652_23978818_23980190
transcript_5021.known	chr1	-	2817	7	FSM	ENSG00000142677.4	ENST00000270800.2	2817	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGATTTTTTTTTT	8	True	NA	NA	False	AATAAA	-13	NA	24143140	24119770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24121738_24123301_24123424_24128140_24128280_24134210_24134387_24137130_24137310_24138581_24138715_24143039
transcript_50215.known	chr14	-	2653	6	FSM	ENSG00000100842.13	ENST00000216733.8	2653	6	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_4	27.8897830755279	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCGACATTTGCTG	-5	True	NA	-12	True	AATAAA	-14	NA	23365172	23356405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23360554_23360834_23365007
transcript_50220.known	chr14	-	2704	5	FSM	ENSG00000100842.13	ENST00000351354.3	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	80.812669180024	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTTCTTGGGAGCATG	783	False	NA	-26	True	AATAAA	-22	NA	23365752	23356655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23365007
transcript_50223.known	chr14	+	1200	5	FSM	ENSG00000166091.21	ENST00000359320.7	1200	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.58113883008419	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGTCTCTTTCTTCC	15	False	NA	NA	False	ATTAAA	-15	NA	23376807	23379772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
transcript_50224.known	chr14	+	1108	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	142.884043895741	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	4	True	NA	13	True	AATAAA	-19	NA	23469702	23478173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_50227.known	chr14	+	2204	10	FSM	ENSG00000129460.16	ENST00000397154.7	2204	10	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	150.612904206712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCCAGCAGACAAGCAG	4	True	NA	NA	False	TATAAA	-28	NA	23469702	23478823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502
transcript_50232.known	chr14	+	803	3	FSM	ENSG00000129460.16	ENST00000556378.5	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCGGGACCAACCTGG	-10	True	NA	NA	False	NA	NA	NA	23469688	23471609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23469728_23470041_23470102_23470905
transcript_5024.known	chr1	-	4566	7	FSM	ENSG00000185436.12	ENST00000327535.6	4566	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	27.633011658763	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAATTGAATGGAAAAG	-19	True	NA	-15	True	AATAAA	-24	NA	24187289	24154167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24157892_24159051_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_50275.nic	chr14	-	2640	22	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_21	103.507139324572	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	9988	False	NA	-16	True	AATAAA	-33	NA	23567545	23559566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567450
transcript_50276.known	chr14	-	2598	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_21	78.9978902671879	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-16	True	NA	-16	True	AATAAA	-33	NA	23567791	23559566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_5029.known	chr1	-	1476	6	FSM	ENSG00000185436.12	ENST00000327575.6	1476	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	36.5863362472932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTGCCTTTGCAAGG	9	True	NA	NA	False	NA	NA	NA	24187261	24157098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24157892_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_50328.nic	chr14	-	2823	21	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-11	0	intron_retention	FALSE	canonical	3	252	junction_20	77.2192333554277	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	9688	False	NA	-16	True	AATAAA	-33	NA	23567845	23559566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_5033.known	chr1	-	674	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	4.32049379893857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	22	True	NA	-11	True	AATAAA	-15	NA	24187248	24161377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
transcript_5034.nnic	chr1	+	3649	3	Antisense	novelGene_ENSG00000185436.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_2	1	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCTGTCTCTTTTTACT	NA	False	NA	10	True	ATTAAA	-7	NA	24151475	24160458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_+_24151740_24155011_24155193_24157254
transcript_50375.nic	chr14	-	2547	21	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	112.493677600121	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	9688	False	NA	-16	True	AATAAA	-33	NA	23567845	23559566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_5038.known	chr1	+	2834	16	FSM	ENSG00000158055.17	ENST00000361548.9	2834	16	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_7	1.99332218503014	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGCTGCTCTCGTT	4	True	NA	NA	False	AATAAA	-28	NA	24319356	24355318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24319569_24331425_24331613_24334644_24334707_24336481_24336828_24337077_24337152_24337635_24337790_24337991_24338104_24339667_24339763_24342114_24342274_24342693_24342773_24342891_24343026_24344896_24344932_24346552_24346642_24347467_24347554_24350057_24350123_24354373
transcript_5042.known	chr1	+	1676	12	FSM	ENSG00000001461.17	ENST00000339255.2	1676	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.1830466456585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	15	True	NA	-18	True	ATTAAA	-1	NA	24415813	24466310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
transcript_5043.known	chr1	+	5372	12	FSM	ENSG00000001461.17	ENST00000374399.9	5372	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.4284682257282	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	3	True	NA	13	True	ATTAAA	-15	NA	24415801	24472976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
transcript_5054.known	chr1	-	2726	9	FSM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	16.814707104199	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-27	True	NA	-1	True	ATTAAA	-22	NA	24413782	24356998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_5056.known	chr1	-	2544	8	FSM	ENSG00000001460.18	ENST00000003583.12	2544	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	31.4448010043645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTTGGGTACCC	30	True	NA	-7	True	ATTAAA	-16	NA	24413725	24357004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24401318_24401457_24413673
transcript_50631.known	chr14	-	4386	7	FSM	ENSG00000092051.18	ENST00000397118.7	4386	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	99.0444625183839	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGATTGTCATCTCC	28	True	NA	-5	True	AATAAA	-14	NA	23578785	23568037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23577868_23577995_23578179
transcript_50632.known	chr14	-	4265	6	FSM	ENSG00000092051.18	ENST00000356300.9	4265	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	37.98631332467	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGATTGTCATCTCC	23	True	NA	-5	True	AATAAA	-14	NA	23578790	23568037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23578179
transcript_50653.known	chr14	+	569	3	FSM	ENSG00000259431.6	ENST00000554970.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTGCCTCTCCCCTC	-37	True	NA	NA	False	NA	NA	NA	23556270	23558898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23556742_23557035_23558694
transcript_50654.known	chr14	+	535	3	FSM	ENSG00000259431.6	ENST00000556015.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGAACTCTGGGTCT	-37	True	NA	NA	False	NA	NA	NA	23556270	23558859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23556742_23557040_23558694
transcript_50657.known	chr14	+	1779	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	21.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	3	True	NA	17	True	AATATA	-17	NA	23556006	23559574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23556742_23557305_23558694
transcript_50662.known	chr14	+	571	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTCAGTGTCCCTTC	-16	True	NA	NA	False	NA	NA	NA	23555987	23558909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23558694
transcript_50664.known	chr14	+	2611	2	FSM	ENSG00000259431.6	ENST00000288014.7	2611	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATGAAATGGGTGACA	-37	True	NA	NA	False	NA	NA	NA	23556270	23560271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23557305_23558694
transcript_50667.known	chr14	+	1595	2	FSM	ENSG00000259431.6	ENST00000554789.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTTCAAATATACCCAA	-14	True	NA	-14	True	NA	NA	NA	23556293	23559543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23557040_23558694
transcript_50669.known	chr14	+	339	2	FSM	ENSG00000259431.6	ENST00000556545.1	339	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTGGCTGCTTCCTC	589	False	NA	NA	False	NA	NA	NA	23556998	23558997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23557035_23558694
transcript_5067.known	chr1	+	2421	5	FSM	ENSG00000117602.13	ENST00000538532.6	2421	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34.1540627158761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCCCTAATTTTTTT	-9	True	NA	NA	False	NA	NA	NA	24502350	24536800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24502464_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_50670.known	chr14	-	9296	10	FSM	ENSG00000136367.15	ENST00000419474.5	9296	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	9.57362632379467	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTGTTTTTTTTCCTA	-11	True	NA	1	True	AATACA	-33	NA	23551765	23520856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23522942_23523202_23526680_23526846_23526974_23527603_23527805_23529709_23529769_23530119_23530195_23531480_23531722_23532566_23533085_23533284_23535375_23551342
transcript_50671.known	chr14	+	1676	9	FSM	ENSG00000100867.15	ENST00000250383.11	1676	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.6583123951777	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGCATCTGTCAAG	0	True	NA	12	True	AATAAA	-18	NA	23636363	23645639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23643151_23643220_23644110_23644163_23644408_23644544_23644826_23644883_23645141
transcript_50672.known	chr14	-	2759	3	FSM	ENSG00000215256.5	ENST00000555045.2	2759	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGGCTTCTGAGTTT	891	False	NA	-10	True	AATAAA	-15	NA	23954204	23938739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23941159_23953773_23954034_23954124
transcript_50675.known	chr14	-	2852	2	FSM	ENSG00000215256.5	ENST00000556379.2	2859	2	7	0	-4	0	multi-exon	FALSE	canonical	3	44	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGTTTTGTGTCATG	898	False	NA	-1	True	AATAAA	-24	NA	23954197	23938730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23941159_23953773
transcript_50676.known	chr14	-	1492	2	FSM	ENSG00000215256.5	ENST00000553454.1	1492	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCACAAGCCTCACCAAAG	973	False	NA	NA	False	AATAAA	-8	NA	23954122	23940215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23941159_23953573
transcript_50682.known	chr14	+	1264	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	64.378028955886	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	16	True	NA	NA	False	AATAAA	-31	NA	23953769	23969279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_50686.known	chr14	+	1143	7	FSM	ENSG00000157326.19	ENST00000558581.5	1143	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	107.595952009771	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	35	False	NA	NA	False	AATAAA	-31	NA	23953788	23969279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_50688.known	chr14	+	727	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	89.0126395519198	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCTGCCGTCAAGGT	25	False	NA	NA	False	NA	NA	NA	23953778	23969009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
transcript_50689.nnic	chr14	+	858	4	NNC	ENSG00000157326.19	novel	1340	4	NA	NA	-2	-3153	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	140.376477928304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTCAATGGTTCATT	-22	True	NA	NA	False	TATAAA	-21	NA	23953731	23964970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_23953917_23955034_23955213_23959901_23960004_23964577
transcript_50690.known	chr14	+	785	4	FSM	ENSG00000157326.19	ENST00000397074.7	785	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	147.02909764926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAGAGAAGGAACCTGG	32	False	NA	NA	False	NA	NA	NA	23953785	23969176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23967210_23967267_23968756
transcript_50691.known	chr14	+	1089	6	FSM	ENSG00000157326.19	ENST00000558263.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	156.824232821334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	-20	True	NA	NA	False	AATAAA	-26	NA	23953733	23969274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965931_23965984_23967210_23967267_23968756
transcript_50693.known	chr14	+	1117	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	142.347286591631	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	-7	True	NA	NA	False	AATAAA	-31	NA	23988817	24006408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
transcript_50698.known	chr14	+	4589	40	FSM	ENSG00000186648.15	ENST00000342740.6	4589	40	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_5	3.51833742339362	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGAGTCTCTGCT	-17	True	NA	10	True	AATAAA	-15	NA	24052008	24069729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24052194_24053708_24053804_24054087_24054139_24054241_24054302_24054395_24054512_24054710_24054809_24055065_24055137_24055236_24055311_24055542_24055619_24055700_24055790_24056298_24056394_24056621_24056709_24056914_24057025_24057166_24057245_24057802_24057880_24057959_24058065_24058154_24058225_24058679_24058762_24058889_24058987_24059134_24059190_24059269_24059443_24059663_24059733_24059969_24060064_24060156_24060256_24060627_24060757_24060926_24061041_24061496_24061673_24062479_24062568_24062708_24062847_24063119_24063184_24063324_24063534_24064245_24064347_24064957_24065274_24065621_24065751_24066397_24066465_24066566_24066657_24068583_24068703_24068785_24068967_24069136_24069248_24069378
transcript_5070.nic	chr1	+	2809	5	NIC	ENSG00000117602.13	novel	6863	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_1	22.3941956765587	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTGCCCATTTTTTA	-1	True	NA	22	True	AATAAA	-23	NA	24502835	24537019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_24503118_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_50706.nic	chr14	+	2941	16	NIC	ENSG00000100897.18	novel	4304	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_2	103.774541943367	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	-28	True	NA	16	True	AATAAA	-16	NA	24114776	24124029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24115294_24115381_24115393_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_5071.known	chr1	+	6863	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.75640815054393	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	-1	True	NA	21	True	AATAAA	-23	NA	24502835	24541040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_50713.known	chr14	+	2570	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	117.126152990208	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	49	True	NA	16	True	AATAAA	-16	NA	24115274	24124029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_50715.known	chr14	+	4304	15	FSM	ENSG00000100897.18	ENST00000446197.8	4304	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	71.3256758875535	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	-28	True	NA	13	True	AATAAA	-24	NA	24114776	24125242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_50717.nic	chr14	+	2547	15	NIC	ENSG00000100897.18	novel	2711	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	123.773183769378	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	-37	True	NA	16	True	AATAAA	-16	NA	24114767	24124029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24114925_24115542_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_50719.nic	chr14	+	2508	15	NIC	ENSG00000100897.18	novel	2711	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	122.601249286174	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114751	24124029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24114925_24115542_24115727_24116971_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_50722.known	chr14	+	2711	15	FSM	ENSG00000100897.18	ENST00000559115.5	2711	15	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_1	82.7484817050427	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114626	24124029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24114925_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_5073.known	chr1	+	2574	4	FSM	ENSG00000117602.13	ENST00000436717.6	2574	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	29.0631496343164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTGCCCATTTTTTA	-27	True	NA	22	True	AATAAA	-23	NA	24502896	24537019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24503118_24514313_24514568_24533082_24533255_24535092
transcript_5075.known	chr1	-	426	3	FSM	ENSG00000286061.1	ENST00000652351.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCCTAAGTCCCAAGT	5047	False	NA	-9	True	AATAAA	-21	NA	24502382	24496264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24496597_24499652_24499712_24502347
transcript_50762.known	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	34.1481883184467	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	-1	True	NA	13	True	NA	NA	NA	24094310	24104125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_50763.nic	chr14	+	1886	10	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	129.265446100478	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	106	False	NA	13	True	NA	NA	NA	24094271	24104125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103841
transcript_50768.known	chr14	+	2505	10	FSM	ENSG00000100889.12	ENST00000545054.6	2505	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	134.523392797969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGAGCAATTTGATA	135	False	NA	-82	True	NA	NA	NA	24094300	24104030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24094846_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_50773.nic	chr14	+	2218	9	NIC	ENSG00000100889.12	novel	2433	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_8	123.168012791471	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGCTGTTTTCATTT	15	True	NA	18	True	NA	NA	NA	24094180	24104130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103509
transcript_50775.nnic	chr14	+	2149	9	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	130.713427007328	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	NA	False	NA	13	True	NA	NA	NA	24094121	24104125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24102752_24102891_24103159_24103256_24103509
transcript_50783.known	chr14	+	2433	9	FSM	ENSG00000100889.12	ENST00000558096.5	2433	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	169.721831241594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGCTGTTTTCATTT	65	False	NA	18	True	NA	NA	NA	24094376	24104130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24094846_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103509
transcript_50800.known	chr14	+	1830	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	38	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	-7	True	NA	5	True	AATAAA	-1	NA	24094158	24100562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
transcript_5081.nic	chr1	+	3787	18	NIC	ENSG00000133226.18	novel	3110	18	NA	NA	1	-19	combination_of_known_junctions	FALSE	canonical	1	465	junction_6	417.954981764791	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGCCACTCTTAC	-18	True	NA	20	True	AATAAA	-12	NA	24643272	24673262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_50812.known	chr14	-	3543	3	FSM	ENSG00000129535.13	ENST00000561028.6	3543	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTTGTTGCTGATGT	7	True	NA	NA	False	CATAAA	-25	NA	24114949	24078661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24081569_24082467_24082876_24114721
transcript_50816.known	chr14	+	2402	15	FSM	ENSG00000100897.18	ENST00000396941.8	2402	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	130.470127161863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	9	True	NA	16	True	AATAAA	-16	NA	24115325	24124029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115393_24115542_24115727_24116971_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_50817.known	chr14	+	2469	13	FSM	ENSG00000100897.18	ENST00000396936.5	2469	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	124.586956469055	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTCTCACTGGCTTTGG	57	False	NA	-32	True	NA	NA	NA	24115373	24123981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115750_24116916_24117045_24117265_24117394_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_50819.known	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	269.472243468599	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	18	True	NA	37	True	AATAAA	-24	NA	24136226	24138967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
transcript_50821.known	chr14	+	1136	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_4	108.683479726369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	-9	True	NA	34	True	AATAAA	-21	NA	24136199	24138964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
transcript_50824.known	chr14	+	865	10	FSM	ENSG00000092010.15	ENST00000561142.5	865	10	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_4	822.264353274947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAGAAACAAAGGGAATG	-12	True	NA	NA	False	NA	NA	NA	24136196	24138787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138264_24138344_24138400_24138473_24138561_24138735
transcript_50828.known	chr14	-	838	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	75.352504935138	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	13	True	NA	-13	True	AATAAA	-15	NA	24141591	24138964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
transcript_50829.nic	chr14	-	1058	6	NIC	ENSG00000100908.14	novel	838	6	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_3	118.285417528958	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	5646	False	NA	-13	True	AATAAA	-15	NA	24141636	24138964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141106_24141317_24141437
transcript_50830.known	chr14	-	771	6	FSM	ENSG00000100908.14	ENST00000560600.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	142.700525577168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGTGGACTTTGA	13	True	NA	NA	False	NA	NA	NA	24141487	24139129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139817_24140888_24140966_24141106_24141317_24141437
transcript_50833.known	chr14	-	953	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	31.1849322590254	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	19	True	NA	-13	True	AATAAA	-15	NA	24141585	24138964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
transcript_50834.nic	chr14	-	1198	5	NIC	ENSG00000100908.14	novel	953	5	NA	NA	-64	0	intron_retention	FALSE	canonical	3	91	junction_3	121.017302481918	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	5627	False	NA	-13	True	AATAAA	-15	NA	24141655	24138964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141106
transcript_50835.known	chr14	-	872	5	FSM	ENSG00000100908.14	ENST00000560403.5	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	165.790530489531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	5712	False	NA	-13	True	AATAAA	-15	NA	24141570	24138964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141347
transcript_5084.known	chr1	+	2671	17	FSM	ENSG00000133226.18	ENST00000479034.5	2671	17	0	0	0	0	multi-exon	FALSE	canonical	1	465	junction_6	415.095470946143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATGAACTCTGTATA	17	True	NA	NA	False	NA	NA	NA	24643307	24671595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385
transcript_5085.known	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	1	465	junction_6	317.272697917344	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	11	True	NA	39	True	AATAAA	-31	NA	24643301	24673281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_50860.known	chr14	+	3502	21	FSM	ENSG00000092098.17	ENST00000324103.11	3502	21	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	24.2808566570457	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTTCTTGGTGGTCC	-7	True	NA	15	True	AATAAA	-15	NA	24147497	24160655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
transcript_50865.nic	chr14	+	3928	21	NIC	ENSG00000092098.17	novel	3502	21	NA	NA	17	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_8	36.0067701967283	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTTCTTGGTGGTCC	3493	False	NA	15	True	AATAAA	-15	NA	24146903	24160655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151298_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
transcript_5089.nic	chr1	+	2641	16	ISM	ENSG00000133226.18	ENST00000323848.14	3735	17	-132	1812	-102	0	5prime_fragment	FALSE	canonical	1	465	junction_6	312.914045705846	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACACAAGAAGGAAAA	50	False	NA	43	True	AAAAAG	-43	NA	24643169	24671469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385
transcript_50906.known	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1345	junction_6	184.464088646002	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	0	True	NA	-8	True	AATAAA	-21	NA	24146610	24143364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_50907.known	chr14	-	1502	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_9	535.674574718644	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGACTAGAAGGAAAATAAA	0	True	NA	-48	True	AAGAAA	-22	NA	24147235	24143404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
transcript_50908.known	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	523.263430103758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	5	True	NA	-8	True	AATAAA	-21	NA	24146605	24143364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
transcript_50911.known	chr14	-	706	10	FSM	ENSG00000100911.16	ENST00000471700.6	706	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	579.136863075422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTCTGGCGTGTGTC	703	False	NA	-9	True	AATAAA	-20	NA	24146579	24143365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24143490_24143584_24143672_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_50914.known	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	16.9737849344217	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	-25	True	NA	11	True	AATAAA	-19	NA	24161264	24166565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
transcript_50918.known	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_19	42.9782457484015	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-2	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_50921.known	chr14	-	3485	30	FSM	ENSG00000196497.17	ENST00000560155.5	3485	30	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	79.2617242271912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTCCCTGAGGCTGG	6765	False	NA	-100	True	NA	NA	NA	24188869	24180304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182424_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_5093.nic	chr1	+	2307	15	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-35	2001	1	86	5prime_fragment	FALSE	canonical	1	465	junction_6	439.1863766892	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATGCTTTTCCATTA	-18	True	NA	NA	False	AGTAAA	-3	NA	24643272	24669594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122
transcript_50951.known	chr14	+	2405	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	27.670999449357	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	5457	False	NA	131	True	AAAACA	-20	NA	24171852	24180257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_50955.nic	chr14	+	2227	20	NIC	ENSG00000100918.14	novel	2405	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.4538594098207	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	-16	True	NA	128	True	AAAACA	-17	NA	24172002	24180254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24172366_24172491_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_5098.nic	chr1	+	2368	14	ISM	ENSG00000133226.18	ENST00000323848.14	3735	17	-132	3687	-102	86	5prime_fragment	FALSE	canonical	1	465	junction_6	334.679551760881	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATGCTTTTCCATTA	50	False	NA	NA	False	AGTAAA	-3	NA	24643169	24669594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122
transcript_50991.known	chr14	-	2740	10	FSM	ENSG00000254692.1	ENST00000530611.1	2740	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	253.930485286869	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGCTCATGCAGT	-1	True	NA	-17	True	AATAAA	-8	NA	24213473	24189156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408
transcript_50997.known	chr14	-	1938	6	FSM	ENSG00000100926.15	ENST00000524835.5	1938	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	106.260058347434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGCTGTTCTCTCCC	-3	True	NA	NA	False	NA	NA	NA	24195637	24189400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24194831_24195345
transcript_51.known	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00145_+_0_1000
transcript_51001.nic	chr14	-	2453	6	NIC	ENSG00000100926.15	novel	2200	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	101.395068913631	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	-23	True	NA	-9	True	AATAAA	-16	NA	24195657	24189148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195308
transcript_51006.known	chr14	-	1266	6	FSM	ENSG00000254505.11	ENST00000533523.6	1266	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	264.117852482561	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCTCTTTGATAGCAG	2230	False	NA	-100	True	NA	NA	NA	24213830	24209674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213408
transcript_51009.known	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	19.8957281847134	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-6	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
transcript_51019.known	chr14	-	582	5	FSM	ENSG00000213920.9	ENST00000396833.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	73.3122602297869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-5	True	NA	-9	True	ATTAAA	-31	NA	24216065	24213942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24214152_24214545_24214600_24215551_24215663_24215736_24215798_24215918
transcript_51022.known	chr14	-	651	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	2163.95591163499	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAATCTTTCTTCTG	10016	False	NA	-26	True	AATAAA	-13	NA	24232325	24216865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
transcript_51027.known	chr14	-	626	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	1946.36230497362	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	9997	False	NA	-17	True	AATAAA	-22	NA	24232303	24216856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
transcript_51028.known	chr14	-	616	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	4058	junction_3	160.800773906374	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-12	True	NA	-17	True	AATAAA	-22	NA	24232367	24216856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
transcript_51032.known	chr14	-	1065	3	FSM	ENSG00000100926.15	ENST00000530468.5	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	158.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTGCTTCGGAATGAC	50	True	NA	46	True	NA	NA	NA	24195584	24192842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24193270_24194674_24195037_24195308
transcript_51035.known	chr14	-	653	3	FSM	ENSG00000129559.13	ENST00000524927.1	653	3	0	0	0	0	multi-exon	FALSE	canonical	3	4058	junction_2	147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTTAAAGTTAGAAGAAA	1	True	NA	NA	False	NA	NA	NA	24232354	24217715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24218216_24218383_24218432_24232249
transcript_51036.known	chr14	+	2276	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	24.8534594059749	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	13	True	NA	128	True	AAAACA	-17	NA	24172079	24180254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_51037.known	chr14	-	2200	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	53.4355686785497	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	6	True	NA	-9	True	AATAAA	-16	NA	24195441	24189148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_51038.known	chr14	+	2720	17	FSM	ENSG00000100918.14	ENST00000619469.4	2720	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_10	24.653774432123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	27	False	NA	128	True	AAAACA	-17	NA	24172134	24180254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_51039.known	chr14	-	2107	6	FSM	ENSG00000100926.15	ENST00000529332.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	109.642327592951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTACAATTACC	-6	True	NA	-52	True	NA	NA	NA	24195453	24189191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24189809_24190379_24190592_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_51040.known	chr14	-	2055	5	FSM	ENSG00000100926.15	ENST00000396854.8	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	57.8338136387356	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGATCCCTGCCCTC	16	True	NA	-24	True	AATAAA	-12	NA	24195618	24190041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_51041.known	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	21.2289111041209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	23	False	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
transcript_51044.known	chr14	+	1893	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	81.0159258844431	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-40	True	NA	33	True	AATAAA	-23	NA	24232441	24239242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_51045.known	chr14	+	1972	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	89.2101140255097	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	NA	False	NA	33	True	AATAAA	-23	NA	24232421	24239242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_51047.known	chr14	+	1595	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	68.4965530357388	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-4	True	NA	33	True	AATAAA	-23	NA	24232928	24239242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_51057.known	chr14	+	1864	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	39.4620070447513	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-5	True	NA	33	True	AATAAA	-23	NA	24232900	24239242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_51060.known	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	61.115541190437	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	4	True	NA	-24	True	ATTAAA	-18	NA	24242623	24239642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_51063.nic	chr14	-	1973	8	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_2	55.0398742286176	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-1	True	NA	-24	True	ATTAAA	-18	NA	24242663	24239642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_51067.known	chr14	-	2168	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	23.6220236220354	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-1	True	NA	-24	True	ATTAAA	-18	NA	24242663	24239642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_51069.known	chr14	-	946	5	FSM	ENSG00000092330.18	ENST00000557921.2	946	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	87.505356978873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTAAGAGTCCATGCCAG	255	False	NA	NA	False	NA	NA	NA	24242407	24240500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24240876_24241019_24241117_24241674_24241777_24241889_24241995_24242140
transcript_51072.known	chr14	-	1874	4	FSM	ENSG00000092330.18	ENST00000558566.1	1874	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	93.0244890099137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	14	True	NA	-63	True	AATGAA	-45	NA	24242613	24239681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24240876_24241674_24241777_24241889_24241995_24242140
transcript_51073.known	chr14	-	885	2	FSM	ENSG00000092330.18	ENST00000559019.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGGGGGAAGGGCT	-5	True	NA	NA	False	NA	NA	NA	24242632	24240482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24240876_24242140
transcript_51075.known	chr14	-	1883	17	FSM	ENSG00000100949.15	ENST00000558376.5	1883	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.6917639603852	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCTCAGGCTACCAAG	12	True	NA	-20	True	AATAAA	-10	NA	24271549	24265556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
transcript_51076.known	chr14	-	1963	17	FSM	ENSG00000100949.15	ENST00000559974.5	1963	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.6624255169219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCAGGCTACCAAGC	12	True	NA	-19	True	AATAAA	-11	NA	24271549	24265555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271249_24271486
transcript_51078.known	chr14	-	2265	16	FSM	ENSG00000100949.15	ENST00000399409.7	2265	16	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_13	12.8097185327738	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-38	True	NA	-1	True	AATAAA	-29	NA	24271599	24265537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112
transcript_5110.nic	chr1	+	963	7	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-138	19081	-102	0	5prime_fragment	FALSE	canonical	1	465	junction_6	442.043644149911	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	50	False	NA	NA	False	AAAAAG	-5	NA	24643169	24652514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433
transcript_51100.known	chr14	-	1427	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	9.4794184948234	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-30	True	NA	-5	True	AATAAA	-20	NA	24299780	24290597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_51102.nic	chr14	-	1738	8	NIC	ENSG00000157379.14	novel	1427	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	49	junction_4	6.04743156814764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-20	True	NA	-5	True	AATAAA	-20	NA	24299770	24290597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_51109.known	chr14	-	2027	7	FSM	ENSG00000157379.14	ENST00000561273.5	2027	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	6.51707159867238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTTGGAGCTAATAAAA	-11	True	NA	23	True	NA	NA	NA	24299761	24290635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24290996_24291138_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_5111.known	chr1	+	768	7	FSM	ENSG00000133226.18	ENST00000468822.5	768	7	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_5	659.536642904193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	-16	True	NA	NA	False	AAAAAG	-5	NA	24643274	24652514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433
transcript_51117.known	chr14	+	331	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	12	12	12	-12	multi-exon	FALSE	canonical	3	139	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	-10	True	NA	78	True	AATAAA	-9	NA	24271212	24298846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24271311_24298613
transcript_5112.known	chr1	+	673	6	FSM	ENSG00000133226.18	ENST00000490543.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	756.441246892315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	14	True	NA	107	True	AAAAAG	-44	NA	24643304	24650086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24647078_24647209_24648858_24649030_24649970
transcript_51122.known	chr14	+	6045	10	FSM	ENSG00000196943.14	ENST00000267425.8	6045	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	8.01079518563375	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGCCAGTCTTTTGTC	-21	True	NA	15	True	AATAAA	-15	NA	24299849	24309124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937
transcript_51125.known	chr14	-	1602	5	FSM	ENSG00000136305.12	ENST00000554411.6	1225	5	-286	-91	-286	91	multi-exon	TRUE	canonical	1	2	junction_1	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTCAAGTATGGAGT	3185	False	NA	93	True	NA	NA	NA	24308263	24305095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817
transcript_51128.known	chr14	-	2294	7	FSM	ENSG00000136305.12	ENST00000258807.5	2294	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.26691175145591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTGACTCCAATTTAA	-18	True	NA	2	True	AATAAA	-23	NA	24311422	24305186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817_24307921_24308478_24308831_24310648
transcript_51141.known	chr14	+	3057	10	FSM	ENSG00000100968.14	ENST00000554050.5	3057	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	31.0976161207746	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	506	False	NA	18	True	AATAAA	-18	NA	24368019	24378056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
transcript_51142.known	chr14	+	4762	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	14.0957922099005	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAAACTCAATATTTT	5	True	NA	3	True	AATAAA	-19	NA	24368183	24379601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_51156.known	chr14	+	5367	9	FSM	ENSG00000100968.14	ENST00000553708.5	5367	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	13.0521789368672	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCAATATTTTTTG	162	False	NA	6	True	AATAAA	-22	NA	24368340	24379604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293
transcript_51157.nic	chr14	+	3844	9	NIC	ENSG00000100968.14	novel	4762	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	71	junction_8	13.7834819621168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGGCTCCAGAGCTCT	500	False	NA	17	True	AATAAA	-17	NA	24368013	24378055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_51164.nic	chr14	+	4602	8	NIC	ENSG00000100968.14	novel	5367	9	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	80	junction_6	11.9386185233007	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCAGGCTCCAGAGCTC	500	False	NA	16	True	AATAAA	-16	NA	24368013	24378054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24374467_24375659_24375716_24375974_24376102_24376293
transcript_51171.known	chr14	+	7635	9	FSM	ENSG00000205978.6	ENST00000382554.4	7635	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	14.1989216139818	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGTCCAGTTCTTTGT	-14	True	NA	28	True	AATAAA	-15	NA	24399002	24419283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24399087_24399229_24399445_24407868_24408528_24408651_24410209_24411075_24411207_24411353_24411451_24412996_24413099_24413315_24413418_24414595
transcript_51173.known	chr14	+	2443	8	FSM	ENSG00000100441.10	ENST00000556842.5	2443	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	33.9657690828245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGGCAGGAAGTGACAG	6768	False	NA	NA	False	NA	NA	NA	24429934	24437617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24429992_24430713_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
transcript_51175.known	chr14	+	6778	8	FSM	ENSG00000100441.10	ENST00000553935.6	6778	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	21.6691259724098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATCCCTCTCTCTGTCTT	-4	True	NA	NA	False	AATAAA	-24	NA	24429953	24441843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24430120_24430713_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
transcript_51178.nic	chr14	-	1302	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	148.950193017666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCTCATCTCTTTG	-7	True	NA	-15	True	AATAAA	-17	NA	24442794	24439767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442097_24442261_24442345_24442453_24442753
transcript_5118.nic	chr1	+	624	5	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-105	2482	-102	0	5prime_fragment	FALSE	canonical	3	1533	junction_1	95.132473425219	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAGAAAGCAGCA	50	False	NA	53	True	GATAAA	-9	NA	24643169	24650032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970
transcript_51180.known	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	79.288334577036	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	11	True	NA	-13	True	AATAAA	-19	NA	24442776	24439765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
transcript_51181.nic	chr14	-	1276	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	142.381740402342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCTCATCTCTTTG	NA	False	NA	-15	True	AATAAA	-17	NA	24442912	24439767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442817
transcript_51183.known	chr14	-	976	5	FSM	ENSG00000100445.18	ENST00000555365.5	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	149.320125904046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATCTTTTCAACTC	22	True	NA	NA	False	NA	NA	NA	24442765	24439901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442753
transcript_51184.nic	chr14	-	1193	5	NIC	ENSG00000100445.18	novel	976	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_4	181.200165562838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCTCATCTCTTTG	NA	False	NA	-15	True	AATAAA	-17	NA	24442912	24439767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442817
transcript_51189.known	chr14	-	1196	3	FSM	ENSG00000100445.18	ENST00000556707.5	1196	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	178	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAGGCAATAAAAATAAAT	389	False	NA	-44	True	NA	NA	NA	24442453	24439796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24442097
transcript_51192.known	chr14	-	1960	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_2	8	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTCACTAACCTTGG	11	True	NA	-27	True	AATAAA	-5	NA	24442776	24439779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24441673
transcript_51193.known	chr14	-	1041	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	143.327906874024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTCTCACTAACCTT	394	False	NA	-29	True	AATAAA	-3	NA	24442448	24439781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
transcript_51194.known	chr14	-	1364	4	FSM	ENSG00000100445.18	ENST00000554698.5	1364	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	163.095745567511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATTGTCTCACTAAC	-15	True	NA	-32	True	NA	NA	NA	24442694	24439784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24442097_24442261_24442345
transcript_51196.known	chr14	-	4021	7	FSM	ENSG00000168952.16	ENST00000396700.5	4021	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	83.7491293487083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTCTTGCAGTTAT	-28	True	NA	-6	True	ATTAAA	-20	NA	25050064	24809655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25010524_25010641_25049877
transcript_51199.known	chr14	-	1970	6	FSM	ENSG00000168952.16	ENST00000419632.6	1970	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	73.4084463805086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATCGCAGATAGAAAT	253	False	NA	NA	False	NA	NA	NA	25049889	24812086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049206
transcript_51200.known	chr14	-	4132	6	FSM	ENSG00000168952.16	ENST00000323944.10	4190	6	-150	208	-150	-6	multi-exon	FALSE	canonical	3	164	junction_4	12.2212928939618	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAAATTTGTTTCTTGC	NA	False	NA	-12	True	ATTAAA	-14	NA	25050297	24809661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049877
transcript_51204.nnic	chr14	-	987	5	NIC	ENSG00000168952.16	novel	4190	6	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	77.0758554931439	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCATTTTGGGTTTTTGC	-26	True	NA	-26	True	AATAAA	-17	NA	25050168	24812491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_25049877
transcript_51206.known	chr14	-	896	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	4.32290411644765	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	15	True	NA	-10	True	AATAAA	-16	NA	26597440	26470117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
transcript_51210.known	chr14	-	3189	19	FSM	ENSG00000184304.17	ENST00000415220.6	3189	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	6.3469638897101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTCTTACTGGAGC	-18	True	NA	5	True	ATTAAA	-28	NA	29927642	29576941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_29577457_29578274_29578361_29597490_29597759_29599026_29599126_29599655_29599818_29624151_29624259_29626483_29626557_29629040_29629094_29630741_29631022_29632868_29632947_29634417_29634542_29636289_29636495_29638488_29638567_29638693_29638905_29656475_29656500_29663698_29663860_29666076_29666209_29725535_29725675_29927248
transcript_51212.known	chr14	-	3833	18	FSM	ENSG00000184304.17	ENST00000331968.11	3833	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	5.61510567707375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCCACCTCATTGAA	-10	True	NA	-1	True	AATAAA	-18	NA	29927847	29576478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_29577457_29578274_29578361_29597490_29597759_29599026_29599126_29599655_29599818_29624151_29624259_29626483_29626557_29629040_29629094_29630741_29631022_29632868_29632947_29634417_29634542_29636289_29636495_29638488_29638567_29638693_29638905_29663698_29663860_29666076_29666209_29725535_29725675_29927248
transcript_51213.known	chr14	+	5770	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	35	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGACTCAGATAAATGGC	-7	True	NA	6	True	AATAAA	-17	NA	30559157	30620064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_5122.nic	chr1	+	557	4	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-105	3490	-102	137	5prime_fragment	FALSE	canonical	3	1533	junction_1	109.770467592862	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGTAATAACCTTTTCT	50	False	NA	NA	False	AATAAA	-6	NA	24643169	24649024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858
transcript_51221.known	chr14	+	2334	14	FSM	ENSG00000092140.16	ENST00000438909.6	2334	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	101.32973885455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATTATAGCCACT	-7	True	NA	6	True	AATAAA	-18	NA	30559157	30616669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_51227.nic	chr14	+	1206	11	ISM	ENSG00000092140.16	ENST00000206595.11	5770	15	-16	14499	-16	0	5prime_fragment	TRUE	canonical	3	366	junction_1	32.5146120997929	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGATT	12	False	NA	NA	False	AATAGA	-17	NA	30559141	30605565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504
transcript_5123.known	chr1	+	2624	4	FSM	ENSG00000133226.18	ENST00000462710.5	2624	4	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	108.603253481038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	2	True	NA	107	True	AAAAAG	-44	NA	24643292	24650086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24649030_24649970
transcript_51235.known	chr14	+	2190	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	57.993878388633	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	-5	True	NA	NA	False	GATAAA	-23	NA	30622318	30735850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_51237.known	chr14	+	2171	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	142.363329928508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	-2	True	NA	NA	False	NA	NA	NA	30622321	30735774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_51238.known	chr14	+	2058	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	99.7876952383559	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAATTTCAACATT	-5	True	NA	NA	False	ATTAAA	-12	NA	30622318	30735789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_51239.known	chr14	+	1995	24	FSM	ENSG00000092108.22	ENST00000676658.1	1995	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	110.962382290368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTAACAGTGAAAATCAG	NA	False	NA	NA	False	AAAAAG	-44	NA	30622303	30735706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30734789_30734859_30735585
transcript_51242.known	chr14	+	2372	15	FSM	ENSG00000092108.22	ENST00000678006.1	2372	15	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	38.0973511318741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTCAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	30622303	30695867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772
transcript_51245.known	chr14	+	4736	11	FSM	ENSG00000092108.22	ENST00000469043.2	4736	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	127.315552859814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTCCTGTCTTAGAA	-9	True	NA	NA	False	NA	NA	NA	30622314	30661939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30658082
transcript_51246.nic	chr14	-	905	5	ISM	ENSG00000196792.12	ENST00000555358.5	2208	15	-77	51767	5	0	5prime_fragment	FALSE	canonical	3	24	junction_2	7.49583217528247	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGGACAAGAAATAAAA	0	True	NA	NA	False	NA	NA	NA	31026396	30947111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
transcript_51247.nic	chr14	-	665	2	ISM	ENSG00000196792.12	ENST00000555358.5	2208	15	-175	60824	-93	-9057	5prime_fragment	FALSE	canonical	3	44	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTAGAGTATGCATTAA	-5	True	NA	13	True	AATAAA	-1	NA	31026494	30956168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_30956243_31025903
transcript_51249.nic	chr14	+	2118	13	NIC	ENSG00000100473.18	novel	2536	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	103.539042555614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	7	True	NA	-12	True	ACTAAA	-18	NA	30874515	30890100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30884984_30885042_30885393_30885621_30885795_30886313_30889615
transcript_51251.known	chr14	+	2536	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	55.5540091612144	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_51257.nic	chr14	+	2492	12	NIC	ENSG00000100473.18	novel	1930	12	NA	NA	-48	0	intron_retention	FALSE	canonical	3	15	junction_8	103.831236243409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	NA	False	NA	-12	True	ACTAAA	-18	NA	30874465	30890100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30884984_30885042_30885393_30885621_30885795_30886313_30889615
transcript_5126.known	chr1	+	4253	6	FSM	ENSG00000169504.15	ENST00000374379.9	4253	6	0	0	0	0	multi-exon	FALSE	canonical	3	2705	junction_2	131.424503042621	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAGACTACTATTTT	0	True	NA	16	True	AATAAA	-19	NA	24745446	24844321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772
transcript_51260.known	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_8	38.9902551928043	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_51262.known	chr14	+	2582	11	FSM	ENSG00000100473.18	ENST00000216361.9	2582	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	89.8615045500575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	5	True	NA	-12	True	ACTAAA	-18	NA	30874513	30890100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30874973_30875055_30875299_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_51273.known	chr14	+	4060	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3.81575680566778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGTAGTGTGA	-1	True	NA	27	True	AATAAA	-24	NA	31025648	31096450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
transcript_51275.known	chr14	+	1608	6	FSM	ENSG00000100478.16	ENST00000554345.6	1608	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	16.1319558640606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTTGTATTTTATAA	1	True	NA	NA	False	AATAAA	-22	NA	31025650	31085802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080645_31084768
transcript_51282.nic	chr14	-	2356	12	ISM	ENSG00000092148.14	ENST00000687002.1	5207	25	-75	28468	0	12316	5prime_fragment	FALSE	canonical	3	99	junction_11	13.8719051347	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGTCTTAATTATAG	-9	True	NA	5	True	AATGAA	-22	NA	31207793	31156839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_51286.nic	chr14	-	2701	10	ISM	ENSG00000092148.14	ENST00000399332.6	9445	43	-408	68309	-397	730	5prime_fragment	FALSE	canonical	3	40	junction_9	29.93119682221	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATACAAACAAAGATGAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	31208201	31168425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207015
transcript_51287.nic	chr14	-	2311	10	ISM	ENSG00000092148.14	ENST00000687002.1	5207	25	-468	40054	-382	730	5prime_fragment	FALSE	canonical	3	99	junction_9	14.2282973136087	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATACAAACAAAGATGAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	31208186	31168425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_51292.nic	chr14	-	940	3	ISM	ENSG00000092148.14	ENST00000554471.3	3093	8	-91	8734	0	175	5prime_fragment	FALSE	canonical	3	99	junction_2	17.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTATCTTCAGTCTT	-20	True	NA	NA	False	ACTAAA	-26	NA	31207804	31177889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31178255_31205796_31205958_31207390
transcript_51293.known	chr14	-	7811	36	FSM	ENSG00000129493.15	ENST00000543095.7	7811	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_35	19.9693642914361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTATTTTTAAATTAT	-1	True	NA	-2	True	AATAAA	-18	NA	31420550	31291787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
transcript_51297.known	chr14	-	507	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	50	False	NA	NA	False	ATTAAA	-19	NA	31420531	31400265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31400513_31402849_31403050_31420471
transcript_51298.known	chr14	-	749	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	20.8486610281492	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	135	False	NA	-35	True	NA	NA	NA	31457376	31427506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
transcript_51301.known	chr14	-	823	3	FSM	ENSG00000129480.13	ENST00000549850.1	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGGACCATTCACACACTT	-10	True	NA	NA	False	NA	NA	NA	31457488	31448161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31448455_31453274_31453345_31457028
transcript_51302.known	chr14	-	2713	3	FSM	ENSG00000129480.13	ENST00000310850.9	2713	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTGTCTCAAAGTTT	5	True	NA	-4	True	AATAAA	-20	NA	31457506	31446035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31448455_31453274_31453345_31457282
transcript_51307.known	chr14	+	3040	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	7.0774289116882	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATATCTGAACTGAAA	-12	True	NA	8	True	AATAAA	-24	NA	31561403	31861224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
transcript_5131.known	chr1	-	1757	7	FSM	ENSG00000117614.10	ENST00000236273.9	1757	7	0	0	0	0	multi-exon	TRUE	canonical	3	504	junction_6	73.432508695627	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGATATTTTAAATTCAA	-1	True	NA	NA	False	ATTAAA	-15	NA	25232502	25222275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25228997_25229124_25232103_25232212_25232443
transcript_51311.nic	chr14	+	4009	2	ISM	ENSG00000100852.14	ENST00000556611.5	4824	7	-38	60626	-38	3296	5prime_fragment	FALSE	canonical	3	61	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGGTTAACTTAAGGTC	651	False	NA	33	True	GATAAA	-3	NA	32076928	32094385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_32077054_32090501
transcript_51312.known	chr14	-	1848	1	FSM	ENSG00000258655.2	ENST00000553596.2	1848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTCAAGTTATTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	32076793	32074945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_32074900_32076800
transcript_51313.known	chr14	-	1304	1	FSM	ENSG00000286527.1	ENST00000670017.1	1304	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTAACGCCCTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	32201736	32200432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_32200400_32201700
transcript_51314.known	chr14	-	2706	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	8.73212459828649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCATTCTAATGGTTTGA	-5	True	NA	-10	True	AATAAA	-15	NA	33951074	33924226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
transcript_51316.known	chr14	-	1004	5	FSM	ENSG00000129521.15	ENST00000553215.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	37.9539194286967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGAGAATTATCACAA	243	False	NA	NA	False	NA	NA	NA	33950826	33925398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950677
transcript_51320.known	chr14	-	2662	2	FSM	ENSG00000165389.7	ENST00000298130.5	2662	2	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGATTATTTGAGCCT	-1	True	NA	NA	False	ATTAAA	-23	NA	34462240	34432787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34435305_34462095
transcript_51324.known	chr14	-	1303	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_4	44.6031389029965	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTATTGTTTTTGCT	-1	True	NA	-8	True	ATTAAA	-20	NA	34539701	34515937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_51325.nic	chr14	-	1455	6	NIC	ENSG00000129518.10	novel	1303	6	NA	NA	72	-72	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	159.448298830687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTCTGAGTGTTAT	74	False	NA	-18	True	ATTAAA	-38	NA	34539626	34516009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539255
transcript_51328.nnic	chr14	-	1123	5	NIC	ENSG00000129518.10	novel	1303	6	NA	NA	-7	-72	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	180.457058603979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTCTGAGTGTTAT	-11	True	NA	-18	True	ATTAAA	-38	NA	34539711	34516009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_34516587_34524696_34524808_34533443_34533540_34536093_34536276_34539554
transcript_51329.known	chr14	-	841	4	FSM	ENSG00000129518.10	ENST00000555705.1	841	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	187.330367710808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTTAAAGTTAATATT	2	True	NA	NA	False	AAAAAG	-43	NA	34539698	34529355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34529476_34533443_34533540_34536093_34536276_34539255
transcript_51332.nic	chr14	-	506	3	ISM	ENSG00000129518.10	ENST00000250454.8	1303	6	-81	17506	-78	2420	5prime_fragment	FALSE	canonical	3	359	junction_1	61	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAACCTATTTACCAG	NA	False	NA	NA	False	NA	NA	NA	34539782	34533443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34533540_34536093_34536276_34539554
transcript_51333.known	chr14	-	1855	15	FSM	ENSG00000129515.20	ENST00000556162.6	1855	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	328.712555095711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATCTTAATCAGAC	18	False	34630176	NA	False	TTTAAA	-35	NA	34630158	34562659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34604134_34604269_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629951_34630110
transcript_51334.known	chr14	-	2975	14	FSM	ENSG00000129515.20	ENST00000652385.1	2975	14	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_13	94.2366403194544	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGAAAATGCTGTGTA	16	False	34630176	NA	False	AATAAA	-20	NA	34630160	34561411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_5134.known	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	258.087272061216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-6	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
transcript_51341.nic	chr14	-	1905	13	NIC	ENSG00000129515.20	novel	2975	14	NA	NA	-32	257	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	224.658197169735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCAGGTCTTAGTTTTT	NA	False	NA	-6	True	AATAAA	-23	NA	34630192	34562402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34609637_34609743_34629906_34629955_34630110
transcript_51349.nic	chr14	-	619	7	ISM	ENSG00000129515.20	ENST00000652385.1	2975	14	-32	36207	-32	5746	5prime_fragment	FALSE	canonical	3	617	junction_6	119.065808134269	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTTGAAGACTTCTT	NA	False	NA	NA	False	AATAAA	-4	NA	34630192	34597618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_51352.nic	chr14	-	598	6	ISM	ENSG00000129515.20	ENST00000652385.1	2975	14	-32	41930	-32	23	5prime_fragment	FALSE	canonical	3	617	junction_5	123.604207048142	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACATTGATTGGTGGTCA	NA	False	NA	NA	False	AATATA	-15	NA	34630192	34603341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_51353.known	chr14	-	441	1	FSM	ENSG00000240463.1	ENST00000480487.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACCATGCTGGGTTAA	41	False	NA	-55	True	NA	NA	NA	34569129	34568688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34568700_34569100
transcript_51354.known	chr14	-	4306	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	16.391054470859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGATCATTGAACCTCT	6	True	NA	NA	False	ATTAAA	-21	NA	34714593	34709112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
transcript_51356.known	chr14	-	1223	4	FSM	ENSG00000165410.15	ENST00000422678.2	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	59.6675977580983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAAATTGTGGCAT	-6	True	NA	NA	False	NA	NA	NA	34714577	34712036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34712978_34713059_34713137_34713396_34713562_34714537
transcript_51358.known	chr14	-	5920	26	FSM	ENSG00000198604.11	ENST00000358716.8	5920	26	0	0	0	0	multi-exon	TRUE	canonical	1	25	junction_14	17.302300425088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAATTCTCTAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	34875647	34752730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_5136.nic	chr1	-	299	3	ISM	ENSG00000117614.10	ENST00000236273.9	1757	7	-23	6739	-23	0	5prime_fragment	FALSE	canonical	3	504	junction_2	105.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAAAAGAAAAAGGTT	3733	False	NA	NA	False	AAAAAG	-25	NA	25232525	25229014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_25229124_25232103_25232212_25232443
transcript_51364.nnic	chr14	-	1329	9	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	-22	47595	-22	10616	5prime_fragment	FALSE	canonical	3	59	junction_8	9.8035389018456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATAAAGAGAAAAAGAG	-3	True	NA	-37	True	ATTAAA	-44	NA	34875382	34800325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_51366.nnic	chr14	-	1264	8	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	-22	48363	-22	9848	5prime_fragment	FALSE	canonical	3	59	junction_7	9.69114891779807	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTTAACATTGTTTC	-3	True	NA	NA	False	GATAAA	-32	NA	34875382	34801093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_51368.known	chr14	+	2187	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_12	53.7548344079137	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTAACTTTCTTTA	-15	True	NA	38	True	AATAAA	-23	NA	34982991	35029567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_51370.known	chr14	+	2304	15	FSM	ENSG00000100883.13	ENST00000555746.6	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	194.205773995165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	-4	True	NA	25	True	AATAAA	-10	NA	34982690	35029554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35028087_35028184_35029060
transcript_51371.known	chr14	+	2107	15	FSM	ENSG00000100883.13	ENST00000678519.1	2107	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	201.501316651393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	-34	True	NA	24	True	AATAAA	-9	NA	34982972	35029553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_51372.known	chr14	+	1949	15	FSM	ENSG00000100883.13	ENST00000555557.5	1949	15	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	196.509450881413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTATCTCGAAGGC	18	True	NA	-75	True	NA	NA	NA	34983024	35029454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_51376.known	chr14	+	1329	8	FSM	ENSG00000100883.13	ENST00000679045.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_4	32.712726101314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGGTGGTGGGTGCCTG	-36	True	NA	NA	False	AATACA	-12	NA	34982970	35012074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508
transcript_5138.known	chr1	-	438	2	FSM	ENSG00000117614.10	ENST00000474160.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAAAAGAAAAAGGTT	3826	False	NA	NA	False	AAAAAG	-25	NA	25232432	25229014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25229124_25232103
transcript_51382.known	chr14	-	580	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	0	0	0	multi-exon	TRUE	canonical	3	20	junction_2	18	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCTCTAGAGGTT	-14	True	NA	NA	False	NA	NA	NA	34982532	34963707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34964041_34969169_34969308_34982423
transcript_51384.known	chr14	+	2253	16	FSM	ENSG00000100883.13	ENST00000678963.1	2253	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	194.002565847866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	6	True	NA	25	True	AATAAA	-10	NA	34982700	35029554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983004_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_51385.known	chr14	+	6118	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	89.3246264413621	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	-15	True	NA	7	True	AATAAA	-21	NA	35122563	35277614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_51386.known	chr14	+	1406	7	FSM	ENSG00000100890.16	ENST00000605870.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	106.129899441937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATCATTTATCGTCC	43	False	NA	-36	True	NA	NA	NA	35122721	35274017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35122911_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_51387.known	chr14	+	789	6	FSM	ENSG00000100890.16	ENST00000557404.3	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	108.913910957233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATATGATGAAGACTT	12	True	NA	NA	False	NA	NA	NA	35122758	35273485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35122911_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_51390.nic	chr14	-	2298	14	NIC	ENSG00000092020.11	novel	1719	13	NA	NA	-384	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_13	48.4892472677368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAAATGTTTTGGTTA	NA	False	NA	-6	True	AATAAA	-22	NA	35122901	35085475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_51391.known	chr14	-	1511	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_9	24.8741275670569	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-1	True	NA	-2	True	AATAAA	-26	NA	35121990	35085471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
transcript_51392.known	chr14	-	1719	13	FSM	ENSG00000092020.11	ENST00000554222.5	1719	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	65.1342630435182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTGGTTACTG	79	False	NA	-3	True	AATAAA	-25	NA	35122447	35085472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
transcript_51393.known	chr14	-	1846	12	FSM	ENSG00000092020.11	ENST00000557217.5	1846	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	52.8141916815472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTTAAAGCAAAATCCT	9	True	NA	-66	True	NA	NA	NA	35122517	35085535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901
transcript_51396.known	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	60.7005766035216	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	-4	True	NA	34	True	NA	NA	NA	35046377	35081387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_51401.nic	chr14	+	599	5	ISM	ENSG00000151327.13	ENST00000382406.7	858	6	-119	2375	-13	0	5prime_fragment	FALSE	canonical	3	277	junction_1	67.8619923079186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAGGAGGTATGCCT	-7	True	NA	27	True	NA	NA	NA	35046258	35079012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926
transcript_51403.known	chr14	+	3053	5	FSM	ENSG00000151327.13	ENST00000280987.9	3053	5	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_4	28.4725745235657	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	6	True	NA	16	True	TATAAA	-17	NA	35046271	35083378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_51407.nic	chr14	+	724	4	ISM	ENSG00000151327.13	ENST00000280987.9	3053	5	-40	4366	-40	0	5prime_fragment	FALSE	canonical	3	394	junction_2	26.7124606795322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAGGAGGTATGCCT	458	False	NA	27	True	NA	NA	NA	35046231	35079012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926
transcript_51408.nic	chr14	+	744	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	-121	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	53	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	377	False	NA	15	True	AATAAA	-27	NA	35046150	35050396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_35046407_35046504_35046629_35050032
transcript_5141.nic	chr1	-	1932	7	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	-35	0	intron_retention	FALSE	canonical	3	6	junction_3	45.5280743668734	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTTGTATATTTAAT	NA	False	NA	-61	True	AATGAA	-30	NA	25247492	25242290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242414_25242538_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_51410.nic	chr14	-	521	2	ISM	ENSG00000092020.11	ENST00000557278.1	896	6	-69	13763	-25	-11979	5prime_fragment	FALSE	canonical	3	72	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTGGGAGGGGCAG	-16	True	NA	1	True	NA	NA	NA	35122542	35121901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_35122102_35122221
transcript_51411.known	chr14	+	540	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	1	True	NA	15	True	AATAAA	-27	NA	35046452	35050396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35046629_35050032
transcript_51412.known	chr14	+	879	7	FSM	ENSG00000100902.11	ENST00000553809.5	879	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	1011.39833069535	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTTTGGTAACAACAAA	-19	True	NA	NA	False	ACTAAA	-41	NA	35292397	35317347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312862_35313060_35314360_35314456_35317248
transcript_51415.known	chr14	+	925	6	FSM	ENSG00000100902.11	ENST00000554541.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1117.03063521105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTTTGGAAAATAATTG	8	False	NA	NA	False	AATAAA	-5	NA	35292348	35317457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_51416.known	chr14	-	1400	6	FSM	ENSG00000100906.11	ENST00000557140.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	123.043732063035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTATTAAACAGATTT	4	True	NA	3	True	NA	NA	NA	35404746	35401539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35402061_35402393_35402535_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_51417.known	chr14	-	1559	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_5	34.7252069828245	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATCCTGATCATTTT	1	True	NA	-7	True	ATTAAA	-15	NA	35404749	35401512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_51430.known	chr14	+	2637	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_6	10.7404853098618	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	1	True	NA	23	True	AATAAA	-20	NA	35826337	35871963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_51435.known	chr14	-	1586	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	114.655939117867	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCCCTTTGACGGTGTG	-9	True	NA	-34	True	AATAAA	-14	NA	36320627	36298567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_51439.known	chr14	-	1809	10	NNC	ENSG00000151332.20	novel	1603	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	175.246140832097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGACGGTGTGACT	-6	True	NA	-31	True	AATAAA	-17	NA	36320624	36298564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_36299191_36300784_36300827_36305088_36305306_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_51440.known	chr14	-	952	7	FSM	ENSG00000151332.20	ENST00000605579.5	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	28.6065260619554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATCTATAAGCAAAACA	92	False	NA	NA	False	AATGAA	-44	NA	36320577	36308016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_51441.known	chr14	+	1924	1	FSM	ENSG00000258708.1	ENST00000556667.1	1924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGAAAATGTTTACC	78	False	NA	22	True	AATAAA	-36	NA	37171887	37173811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_37171900_37173800
transcript_51444.known	chr14	+	6258	15	FSM	ENSG00000151338.19	ENST00000396294.6	6258	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	21.6621790224345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATATTTCAATGCAATT	1	True	NA	8	True	AATAAA	-20	NA	37197912	37551258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_37198105_37219552_37219692_37227725_37227839_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_51446.known	chr14	+	5983	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_12	9.21464715668605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	-18	True	NA	9	True	AATAAA	-21	NA	37197936	37551259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_5145.nic	chr1	-	2099	6	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	-35	0	intron_retention	FALSE	canonical	3	6	junction_2	43.116586135732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-19	True	AATAAA	-20	NA	25247492	25242248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_51451.known	chr14	+	732	5	FSM	ENSG00000151338.19	ENST00000556615.5	732	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26.233328038966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGACTCAGATAAAGAGAA	1	True	NA	NA	False	NA	NA	NA	37197912	37268718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_37198105_37247102_37247241_37247798_37247908_37266937_37267170_37268657
transcript_51452.known	chr14	+	511	3	FSM	ENSG00000139865.16	ENST00000556845.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCCGCCCTCCTGCAGG	231	False	NA	NA	False	NA	NA	NA	37595846	37622318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_37596009_37606662_37606743_37622049
transcript_51453.known	chr14	-	3509	2	FSM	ENSG00000129514.8	ENST00000250448.5	3509	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGACTCATGAACTCTCT	3	True	NA	-3	True	AATAAA	-38	NA	37595249	37589551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_37592712_37594900
transcript_51455.nnic	chr14	+	1000	4	NIC	ENSG00000258649.2	novel	1017	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	16.779617264871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	0	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_38191232_38193183_38193324_38199045_38199512_38202781
transcript_51457.nnic	chr14	+	943	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	0	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_38191232_38193240_38193324_38199045_38199512_38202781
transcript_51461.nnic	chr14	+	860	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	31	junction_1	8	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	0	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_38191232_38199045_38199512_38202781
transcript_51467.known	chr14	-	3843	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_14	56.2769172284906	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-40	True	NA	-1	True	AATAAA	-18	NA	39103235	39031918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_51472.known	chr14	+	1320	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_5	32.8366702572025	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	9	True	NA	6	True	AATAAA	-22	NA	39114322	39136973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_51474.known	chr14	+	825	10	FSM	ENSG00000092208.19	ENST00000412033.7	825	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	112.063584243858	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCAATTCAAGTACAG	-8	True	NA	NA	False	NA	NA	NA	39114305	39136541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114396_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_51476.known	chr14	+	801	9	FSM	ENSG00000092208.19	ENST00000396249.7	801	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	108.757471007743	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGAAGATATTTCTCAT	-8	True	NA	NA	False	NA	NA	NA	39114305	39136496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39136439
transcript_51478.nic	chr14	+	1144	9	NIC	ENSG00000092208.19	novel	1320	10	NA	NA	9	62	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	122.292617827079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTTGGTTACTAAAAT	-20	True	NA	9	True	TATAAA	-14	NA	39114293	39136837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39131957_39132069_39133660_39133720_39136439
transcript_51479.known	chr14	+	1094	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	115.565998459755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	-8	True	NA	25	True	NA	NA	NA	39114305	39136775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_5148.nic	chr1	-	2161	6	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	-35	0	intron_retention	FALSE	canonical	3	12	junction_1	41.2679052048926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTTGTATATTTAAT	NA	False	NA	-61	True	AATGAA	-30	NA	25247492	25242290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242414_25242538_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_51484.known	chr14	-	1000	6	FSM	ENSG00000182400.15	ENST00000555269.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	43.3192797724062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCCTTATTTTAAACC	13	True	NA	50	True	AATGAA	-33	NA	39170353	39150117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159449_39159551_39170014
transcript_51485.known	chr14	-	3251	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	10.2878569196893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTCGTGATTTTGT	33	True	NA	-5	True	AATAAA	-19	NA	39170333	39147813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
transcript_51489.known	chr14	-	3229	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.7523584206019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCGTGATTTTGTGG	-27	True	NA	-3	True	AATAAA	-21	NA	39170393	39147811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
transcript_5149.known	chr1	-	1425	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	40.7208484685671	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	0	True	NA	-19	True	AATAAA	-20	NA	25247454	25242248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
transcript_51491.known	chr14	+	3537	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_6	29.7297725352886	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	10	True	NA	4	True	ATTAAA	-15	NA	39175253	39183220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
transcript_51496.nic	chr14	+	799	8	ISM	ENSG00000100941.9	ENST00000216832.9	3537	9	-88	3866	-17	108	5prime_fragment	FALSE	canonical	3	638	junction_6	28.0196723895253	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTAAATATATAAGAACT	198	False	NA	NA	False	AATGAA	-14	NA	39175165	39179354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323
transcript_51497.nic	chr14	+	660	7	ISM	ENSG00000100941.9	ENST00000216832.9	3537	9	-88	4082	-17	-108	5prime_fragment	FALSE	canonical	3	638	junction_6	30.1974980567743	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGAAAGCAGGTTGA	198	False	NA	33	True	NA	NA	NA	39175165	39179138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090
transcript_51501.known	chr14	+	601	4	FSM	ENSG00000100941.9	ENST00000556530.1	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	23.0988215187606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTAGTGAAATAATGCAG	-14	True	NA	53	True	NA	NA	NA	39175229	39177708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411
transcript_51505.nic	chr14	+	3105	24	NIC	ENSG00000150527.18	novel	3860	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	32.1521077695766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATGGCTCTATTAAC	11	True	NA	15	True	AATAAA	-16	NA	39267085	39350690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_39267523_39276933_39276956_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_51506.known	chr14	+	3860	24	FSM	ENSG00000150527.18	ENST00000280083.7	3860	24	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_18	23.9107508782438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACTAAAAAGAAA	-6	True	NA	NA	False	AAAACA	-4	NA	39267145	39351395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_5151.nic	chr1	-	2328	5	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-35	0	intron_retention	FALSE	canonical	3	42	junction_2	30.0697106736995	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-19	True	AATAAA	-20	NA	25247492	25242248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_51510.known	chr14	+	2762	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_18	25.6723232649128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	19	False	NA	19	True	AATAAA	-20	NA	39267413	39350694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_51513.known	chr14	-	1359	1	FSM	ENSG00000258940.2	ENST00000605298.1	1359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCGGAAGACTCCAGA	22	False	NA	NA	False	AATAAA	-21	NA	39267061	39265702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39265700_39267100
transcript_51516.nnic	chr14	+	834	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-249	-8255	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	42.4578222082418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	NA	False	NA	0	True	AATAAA	-22	NA	40954443	41141054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_51518.known	chr14	+	599	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	26.9196334794266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	NA	False	NA	-1	True	AATAAA	-11	NA	40954692	41149309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
transcript_51522.known	chr14	-	530	2	FSM	ENSG00000258636.2	ENST00000557067.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATATCCCATTAAAAAGT	NA	False	NA	NA	False	AATAAA	-7	NA	41604856	41587860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_41588288_41604753
transcript_51523.known	chr14	+	4417	6	FSM	ENSG00000165379.14	ENST00000298119.9	4417	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.56124969497314	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATTGCCTGATTTG	-24	True	NA	13	True	AATAAA	-19	NA	41606875	41904549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_41608563_41766853_41767030_41886605_41888011_41891249_41891963_41898916_41898961_41904157
transcript_51527.known	chr14	+	2935	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	3.93700393700591	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGCTCCCAGATTTTC	-16	True	NA	17	True	AATAAA	-30	NA	44897274	44907257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
transcript_51529.known	chr14	-	6522	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2.27760839478607	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATATGTCATATGAT	-17	True	NA	-20	True	AATAAA	-14	NA	44961947	44924323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
transcript_5153.known	chr1	-	2941	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	13.0724477007517	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	0	True	NA	-19	True	AATAAA	-20	NA	25247454	25242248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
transcript_51538.known	chr14	+	3532	14	FSM	ENSG00000185246.18	ENST00000355765.11	3532	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	54.0439225272387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	0	True	NA	NA	False	NA	NA	NA	45084115	45116282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_51542.known	chr14	+	3507	13	FSM	ENSG00000185246.18	ENST00000477626.5	3507	13	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_7	44.1150641945457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	2	True	NA	24	True	AATAAA	-21	NA	45084117	45115601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_51556.known	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2862	junction_2	110.878937985935	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-9	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
transcript_51559.known	chr14	-	1684	8	FSM	ENSG00000100442.11	ENST00000216330.7	1684	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1061.11545083464	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATGAGTCTTCCGTTT	639	False	NA	-5	True	AATAAA	-14	NA	45135319	45115599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348_45134807_45135258
transcript_51566.known	chr14	+	7131	23	FSM	ENSG00000187790.11	ENST00000267430.10	7131	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	8.38584009205916	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCGGGTTATTTCTTC	-9	True	NA	NA	False	ATTAAA	-21	NA	45135929	45200890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949_45167164_45170588_45170747_45173054_45173211_45175070_45176977_45181429_45181525_45181636_45181706_45183773_45183903_45185216_45185374_45187780_45187888_45188801_45189363_45196171_45196548_45198643_45198936_45199869
transcript_51571.known	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_14	35.957440120231	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	277	False	45253219	-2	True	AATAAA	-21	NA	45253202	45203189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_51575.nic	chr14	-	2739	12	NIC	ENSG00000129534.14	novel	4577	17	NA	NA	-33	2578	combination_of_known_junctions	TRUE	canonical	3	52	junction_11	109.727611658737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTAAAAGGAAAGCTG	244	False	NA	3	True	AAGAAA	-14	NA	45253235	45224247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
transcript_51579.nic	chr14	-	2658	11	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	-60	21058	-60	2578	5prime_fragment	FALSE	canonical	3	289	junction_8	27.8632374285545	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTAAAAGGAAAGCTG	217	False	NA	3	True	AAGAAA	-14	NA	45253262	45224247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_5158.known	chr1	-	565	3	FSM	ENSG00000117616.18	ENST00000562018.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTTGCTGCAAATGACA	946	False	NA	NA	False	NA	NA	NA	25337411	25304682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25304822_25306895_25306950_25337039
transcript_51583.known	chr14	-	2131	11	FSM	ENSG00000129534.14	ENST00000454990.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	134.148015266719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATATAAAATGT	-14	True	NA	NA	False	AATAAA	-37	NA	45253198	45226825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45226837_45227662_45227815_45231140_45231299_45232508_45232628_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_51584.nic	chr14	-	2211	11	NIC	ENSG00000129534.14	novel	2131	11	NA	NA	-33	54	combination_of_known_junctions	FALSE	canonical	3	52	junction_10	114.360876177126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGGATAATAAAAAGTC	244	False	NA	NA	False	TATAAA	-39	NA	45253235	45226771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
transcript_51588.nic	chr14	-	2130	10	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	-60	23582	-60	54	5prime_fragment	FALSE	canonical	3	289	junction_7	29.2287698621465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGGATAATAAAAAGTC	217	False	NA	NA	False	TATAAA	-39	NA	45253262	45226771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_51595.nic	chr14	-	2041	9	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	-60	24497	-60	0	5prime_fragment	FALSE	canonical	3	289	junction_6	30.0704901024243	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGATGACTTATCTAA	217	False	NA	NA	False	AGTAAA	-20	NA	45253262	45227686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_51598.nic	chr14	-	1799	8	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	-60	28065	-60	1318	5prime_fragment	FALSE	canonical	3	289	junction_5	31.3707259874487	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGATCTGTCCGTGAC	217	False	NA	NA	False	AAAACA	-6	NA	45253262	45231254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_5160.known	chr1	-	1954	3	FSM	ENSG00000117616.18	ENST00000431849.3	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGCTGTAT	8	True	NA	NA	False	GGGGCT	-2	NA	25247446	25244071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25245302_25246443_25247030_25247308
transcript_51601.known	chr14	-	1950	8	FSM	ENSG00000129534.14	ENST00000627697.1	1950	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	119.353872743097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCTGTCTCAGCCTCCC	77	False	NA	NA	False	NA	NA	NA	45253402	45232572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45232628_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_51605.known	chr14	-	808	3	FSM	ENSG00000129534.14	ENST00000451174.1	808	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGCAGCATACCTAC	7	True	NA	NA	False	AATGAA	-29	NA	45253177	45246820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45247378_45250030_45250139_45253034
transcript_51606.nic	chr14	-	2246	2	ISM	ENSG00000129534.14	ENST00000627697.1	1950	8	140	12787	-60	1461	5prime_fragment	FALSE	canonical	3	302	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGTAGAAAGGCCACT	217	False	NA	NA	False	AATAAA	-5	NA	45253262	45245359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45247378_45253034
transcript_51612.known	chr14	+	1502	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	151.633329669524	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTAACTTTTTTT	1	True	NA	14	True	ATTAAA	-17	NA	49598939	49614672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
transcript_51617.known	chr14	+	957	3	FSM	ENSG00000165501.17	ENST00000318317.8	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	149	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	6	True	NA	12	True	ATTAAA	-15	NA	49598760	49614670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49599204_49602369_49602469_49614255
transcript_51618.known	chr14	-	7062	3	FSM	ENSG00000213741.11	ENST00000396020.7	7062	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	10575	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTCTATGTGATGGT	0	True	NA	1	True	AATAAA	-29	NA	49586376	49570983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49577854_49585949_49586050_49586284
transcript_51619.known	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	2642.5	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-4	True	NA	-31	True	AATAAA	-15	NA	49586380	49583576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49583676_49585949_49586050_49586284
transcript_51620.known	chr14	-	488	3	FSM	ENSG00000213741.11	ENST00000557111.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	7968.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	NA	False	NA	30	True	AATAAA	-13	NA	49598690	49583578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49583676_49585949_49586050_49598399
transcript_51621.known	chr14	-	844	2	FSM	ENSG00000213741.11	ENST00000554075.2	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	21239	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCGGTTCAAGCGATTC	0	True	NA	NA	False	NA	NA	NA	49586376	49585297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49586050_49586284
transcript_51622.known	chr14	+	299	1	FSM	ENSG00000276168.1	ENST00000618786.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	12	False	NA	-12	True	NA	NA	NA	49586579	49586878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49586600_49586900
transcript_51623.known	chr14	-	403	1	FSM	ENSG00000244270.1	ENST00000497398.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGAATGTGTTTGTTTT	9064	False	NA	-97	True	NA	NA	NA	49577794	49577391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49577400_49577800
transcript_51624.known	chr14	-	499	2	FSM	ENSG00000213741.11	ENST00000557367.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	507	False	NA	30	True	AATAAA	-13	NA	49586351	49583578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49583676_49585949
transcript_51626.known	chr14	-	676	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	6112	junction_1	0	1171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTTAGAAGGATCTTTA	-6	True	NA	NA	False	CATAAA	-7	NA	49620626	49618529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49619141_49620561
transcript_51627.known	chr14	+	2683	1	FSM	ENSG00000168282.6	ENST00000305386.4	2683	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGCAAGAAACTGT	11	True	NA	7	True	AATAAA	-21	NA	49620798	49623481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49620800_49623500
transcript_51628.known	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	22	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-12	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49626049_49628011_49628156_49633286
transcript_51629.known	chr14	-	2819	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	2	True	NA	-15	True	AATAAA	-20	NA	49635230	49625173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49626049_49633286
transcript_51631.known	chr14	-	1692	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_14	15.1703292280981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	-3	True	NA	-16	True	AATAAA	-17	NA	49688214	49643554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_51632.known	chr14	-	1792	18	FSM	ENSG00000100479.13	ENST00000539565.6	1792	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	23.9978372727966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTACAATAAAATTATG	NA	False	NA	-46	True	AAGAAA	-43	NA	49688422	49643584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
transcript_51635.known	chr14	-	496	3	FSM	ENSG00000100479.13	ENST00000553805.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGTTGATCTGACTTTT	30	False	NA	55	True	NA	NA	NA	49688203	49679473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49679801_49683592_49683694_49688135
transcript_51638.nic	chr14	-	1674	14	ISM	ENSG00000165525.18	ENST00000298310.10	5819	33	-295	46613	-262	-83	5prime_fragment	FALSE	canonical	3	154	junction_3	26.9753339006815	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGCAGAAGCCTCAGAA	9761	False	NA	NA	False	AATAAA	-1	NA	49853083	49828695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_51639.known	chr14	+	4969	13	FSM	ENSG00000165516.11	ENST00000298307.10	4969	13	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_5	65.3696221497417	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGTGCTGAAGTATAA	16	True	NA	19	True	AATAAA	-19	NA	49768152	49786385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_5164.known	chr1	+	2266	7	FSM	ENSG00000183726.11	ENST00000374358.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_5	90.4537942205239	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTCTTTAATTTTT	12	True	NA	29	True	ATTAAA	-17	NA	25338333	25362361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_51640.nnic	chr14	+	2306	13	NNC	ENSG00000165516.11	novel	4969	13	NA	NA	-535	-471	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_12	190.198343111138	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGGATATTACCTGAGT	-7	True	NA	NA	False	AAAAAG	-9	NA	49767594	49785914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49785579
transcript_51645.known	chr14	+	1756	12	FSM	ENSG00000165516.11	ENST00000555443.5	1756	12	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_5	67.6521242634359	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGTATTTAACA	31	False	NA	0	True	NA	NA	NA	49768167	49783115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_51651.known	chr14	-	590	4	FSM	ENSG00000165525.18	ENST00000556672.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	22.5289936649544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTTATCTGTAGGTCT	-16	True	NA	NA	False	AATAAA	-23	NA	49852821	49845974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49846266_49851562_49851666_49851806_49851876_49852694
transcript_51652.known	chr14	-	1486	2	FSM	ENSG00000282885.2	ENST00000655317.1	1486	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTTCTGGGTCTGCC	5296	False	NA	NA	False	AATAAA	-17	NA	49862864	49861175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49862317_49862519
transcript_51655.known	chr14	-	300	1	FSM	ENSG00000274012.1	ENST00000490232.3	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCTCCCTCATTAA	-5	True	NA	0	True	NA	NA	NA	49862849	49862549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49862500_49862800
transcript_51656.known	chr14	+	3875	2	FSM	ENSG00000165527.8	ENST00000298316.7	3875	2	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	0	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCACGTTATGTTACT	-12	True	NA	13	True	AATAAA	-17	NA	49893081	49897054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49893158_49893255
transcript_51658.known	chr14	-	1772	6	FSM	ENSG00000100483.14	ENST00000395860.7	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.4277510374971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-4	True	NA	-13	True	AATAAA	-15	NA	50116572	50108636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_51659.known	chr14	-	1793	6	FSM	ENSG00000100483.14	ENST00000491402.5	1793	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	14.7105404387466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTGAATTTCAGAAA	NA	False	NA	-9	True	AATAAA	-19	NA	50116600	50108632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_51661.known	chr14	-	1849	5	FSM	ENSG00000100483.14	ENST00000484763.1	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	16.2076370887307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTGTGACTGTGAA	10	True	NA	-18	True	AATAAA	-10	NA	50116558	50108641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079
transcript_51662.known	chr14	-	795	5	FSM	ENSG00000100483.14	ENST00000395859.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.9903828367341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAAAATTCCTGCTTG	NA	False	NA	NA	False	GGGGCT	-8	NA	50116600	50109536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_5167.known	chr1	+	1102	6	FSM	ENSG00000183726.11	ENST00000480937.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	438.583811830761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCAGGCTCCCTGTGT	1	True	NA	NA	False	NA	NA	NA	25338322	25361279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25356792_25356854_25360659
transcript_51671.known	chr14	-	1958	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	12.8514590611339	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAATTTTGAAGAGT	-4	True	NA	NA	False	AATACA	-18	NA	50312229	50245650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_51678.known	chr14	-	6095	10	FSM	ENSG00000087299.12	ENST00000267436.9	6095	10	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	6.51683479938453	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTGTCCCTGGGAT	-4	True	NA	-5	True	ATTAAA	-16	NA	50312229	50242433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_51684.known	chr14	+	2944	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	92.2119298138804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-6	True	NA	15	True	AATAAA	-25	NA	50312323	50327957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_51689.known	chr14	+	2908	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	60.8173494983134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-6	True	NA	15	True	AATAAA	-25	NA	50312323	50327957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_5169.known	chr1	+	776	6	FSM	ENSG00000183726.11	ENST00000498135.5	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	414.450769090854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGAAATTACA	-5	True	NA	-22	True	NA	NA	NA	25338316	25360967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25338457_25340473_25340580_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_51697.nic	chr14	+	505	4	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-19	663	-19	-248	5prime_fragment	FALSE	canonical	3	220	junction_1	41.0203201677738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATATTGGAAATGGAAATA	801	False	NA	NA	False	NA	NA	NA	50312304	50324043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944
transcript_51698.nic	chr14	+	1024	4	NIC	ENSG00000125375.18	novel	1671	4	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	122.303811151665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	801	False	NA	NA	False	NA	NA	NA	50312304	50326226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_50312390_50321482_50321595_50322510_50322720_50325608
transcript_51704.nic	chr14	+	579	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-19	1814	-19	0	5prime_fragment	FALSE	canonical	3	220	junction_1	44	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	801	False	NA	11	True	ATTAAA	-13	NA	50312304	50322892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_50312390_50321482_50321595_50322510
transcript_51705.known	chr14	-	4354	33	FSM	ENSG00000012983.12	ENST00000013125.9	4354	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	55.5404905789461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATAAAGTTATTTATT	10	True	NA	-52	True	AATAAA	-14	NA	50532609	50418524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
transcript_51706.known	chr14	-	3277	33	FSM	ENSG00000012983.12	ENST00000557390.6	3277	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	62.1470031457672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCCTTATTTATTA	0	True	NA	NA	False	AAAACA	-4	NA	50532619	50419559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429257_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
transcript_5171.known	chr1	+	3940	11	FSM	ENSG00000204178.11	ENST00000374343.5	3940	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	11.1193524991341	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTTCTGCCTTTTTAA	-5	True	NA	NA	False	AATAAA	-20	NA	25430896	25500209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25431179_25446761_25446904_25448807_25448935_25454258_25454383_25456652_25456832_25458390_25458893_25484115_25484275_25485612_25485796_25489172_25489294_25491409_25491585_25498263
transcript_51711.nic	chr14	-	1123	12	ISM	ENSG00000012983.12	ENST00000013125.9	4354	33	-11	45553	-1	0	5prime_fragment	FALSE	canonical	3	19	junction_11	55.987749545535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACTGCTGAAAGACTT	-1	True	NA	NA	False	NA	NA	NA	50532620	50464077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
transcript_51712.nnic	chr14	-	1222	12	NNC	ENSG00000012983.12	novel	3277	33	NA	NA	-162	0	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_11	33.4970086243064	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACTGCTGAAAGACTT	NA	False	NA	NA	False	NA	NA	NA	50532781	50464077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532461
transcript_51714.known	chr14	+	2853	14	FSM	ENSG00000198513.14	ENST00000441560.6	2853	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.4745394328992	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTGAATTTGAAAAT	235	False	NA	NA	False	ATTAAA	-32	NA	50533025	50633049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50533368_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_51716.known	chr14	-	3094	5	FSM	ENSG00000151748.15	ENST00000324679.5	3094	5	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	24.7689321530017	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGGCCATAGACAAAG	-6	True	NA	54	True	NA	NA	NA	50668306	50633579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50635385_50640749_50640894_50644743_50645015_50665178_50665620_50667873
transcript_51722.known	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_13	35.9477922453246	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	0	True	NA	-17	True	AATAAA	-21	NA	50944483	50905216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_51724.known	chr14	-	2696	19	FSM	ENSG00000100504.17	ENST00000544180.6	2696	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	51.9091085991231	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGTGCCAAAACTTAT	0	True	NA	-18	True	AATAAA	-20	NA	50944483	50905217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50944160
transcript_51727.known	chr14	+	1815	13	FSM	ENSG00000131969.15	ENST00000337334.7	1815	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	95.394648114498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	1	True	NA	21	True	AATAAA	-21	NA	50872052	50904970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50872279_50877951_50878080_50878744_50878848_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_51728.known	chr14	+	1477	11	FSM	ENSG00000131969.15	ENST00000353130.5	1477	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	99.8859850029022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	41	False	NA	21	True	AATAAA	-21	NA	50872159	50904970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50872279_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_51729.known	chr14	+	850	6	FSM	ENSG00000131969.15	ENST00000554566.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	87.3558240760168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATGCTGAAACCTCA	NA	False	NA	NA	False	NA	NA	NA	50893581	50904571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50893759_50895563_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_51734.known	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	19.6516538744198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	13	False	NA	15	True	AATAAA	-43	NA	50944470	50923236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_51739.known	chr14	-	3726	7	FSM	ENSG00000100505.14	ENST00000360392.4	3726	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.19722101554181	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTGTTCTATTTGT	25	True	NA	2	True	AATAAA	-26	NA	51095076	50996063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50998189_51000682_51000841_51009079_51009234_51010383_51010495_51022834_51022958_51025264_51025361_51094117
transcript_5174.nic	chr1	+	1032	6	ISM	ENSG00000204178.11	ENST00000647928.1	2887	11	-128	40727	-26	-280	5prime_fragment	FALSE	canonical	3	58	junction_5	9.91160935469109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAGAAAAGGACAAGGA	494	False	NA	11	True	NA	NA	NA	25430831	25458503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_25431179_25446761_25446904_25448807_25448935_25454258_25454383_25456652_25456832_25458390
transcript_51740.known	chr14	+	4025	8	FSM	ENSG00000139921.13	ENST00000457354.7	4025	8	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_7	126.628655234629	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAAGTCAGATTATATA	0	True	NA	36	True	AATAAA	-30	NA	51240246	51257655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51240445_51243855_51243972_51245312_51245359_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_51743.known	chr14	+	4828	14	FSM	ENSG00000139926.16	ENST00000395718.6	4828	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	14.6840492295262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	NA	False	NA	25	True	AATAAA	-21	NA	51651857	51730727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701136_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_51744.known	chr14	+	4800	14	FSM	ENSG00000139926.16	ENST00000344768.10	4800	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	17.780049986285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	-19	True	NA	25	True	AATAAA	-21	NA	51651909	51730727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701160_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_51747.known	chr14	+	2125	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	34	1414	4	1220	multi-exon	FALSE	canonical	3	120	junction_2	29.4089933334837	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAGAAAAAGTT	3	True	NA	NA	False	AAAAAG	-5	NA	51860645	51968381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
transcript_51750.known	chr14	-	4870	22	FSM	ENSG00000087303.19	ENST00000216286.10	4870	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	8.63810048826427	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGACTTAAGGATCTAT	17	True	NA	-6	True	AATAAA	-15	NA	52069059	52004808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52027200_52027345_52028721_52028851_52029546_52029691_52038746_52038978_52040650_52040852_52042104_52042351_52042781_52042932_52053578_52053939_52054019_52054322_52060123_52060357_52067857_52068164_52068766
transcript_51754.known	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	113.525866871738	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	-10	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
transcript_51755.known	chr14	+	851	8	FSM	ENSG00000087302.9	ENST00000556760.5	851	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	842.518503400031	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTATTGCTTTTTTCTT	-3	True	NA	2	True	NA	NA	NA	51989614	52004653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004239_52004243_52004361
transcript_51761.known	chr14	+	2957	2	FSM	ENSG00000168229.4	ENST00000306051.3	2957	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAGGAAATTACTT	-8	True	NA	NA	False	AATAAA	-16	NA	52267697	52276724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52268661_52274730
transcript_51763.known	chr14	+	2458	2	FSM	ENSG00000125384.7	ENST00000245457.6	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATGGAGTAGTATT	2	True	NA	NA	False	AATAAA	-15	NA	52314311	52328598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52315392_52327220
transcript_51764.known	chr14	-	4557	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_16	14.4681546853771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAAGCCTCCTTTAG	17	True	NA	-14	True	AATAAA	-20	NA	52552505	52430595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
transcript_51765.nic	chr14	-	316	2	ISM	ENSG00000087301.9	ENST00000281741.9	4557	21	-51	113701	-34	-55934	5prime_fragment	FALSE	canonical	3	150	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAACAGCAGATACAGA	NA	False	NA	NA	False	AATAAA	-1	NA	52552556	52544296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_52544372_52552315
transcript_51766.known	chr14	-	5139	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_4	34.8950171546343	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	-3	True	NA	0	True	AATAAA	-18	NA	52695558	52639914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
transcript_5177.nnic	chr1	+	2875	9	NNC	ENSG00000157978.12	novel	2914	9	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	1	12	junction_2	39.6634277389133	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACGCTCATCAGGTGGAG	-34	True	NA	10	True	AATAAA	-22	NA	25543600	25568886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_25543787_25553921_25554021_25554859_25554973_25557152_25557268_25562643_25562717_25563069_25563154_25563660_25563792_25565172_25565208_25566847
transcript_51773.known	chr14	+	2163	14	FSM	ENSG00000100519.12	ENST00000445930.7	2163	14	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_4	76.752888656778	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGAATCATCATTGG	-7	True	NA	NA	False	AATAAA	-16	NA	52707199	52728590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_51778.known	chr14	+	1590	14	FSM	ENSG00000100519.12	ENST00000612399.4	1590	14	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_4	76.752888656778	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTTGTCTTTTCTG	1	False	NA	14	True	AATAAA	-27	NA	52707177	52727995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_51779.known	chr14	+	1037	5	FSM	ENSG00000100519.12	ENST00000554952.5	1037	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	495.934975576436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTGCCTAAACCAGG	-5	True	NA	NA	False	NA	NA	NA	52707201	52710335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52709574
transcript_5178.known	chr1	+	2914	9	FSM	ENSG00000157978.12	ENST00000374338.5	2914	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_8	10.8563057713018	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACGCTCATCAGGTGGAG	-29	True	NA	10	True	AATAAA	-22	NA	25543605	25568886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25543787_25553921_25554065_25554859_25554973_25557152_25557268_25562643_25562717_25563069_25563154_25563660_25563792_25565172_25565208_25566847
transcript_51780.known	chr14	+	4554	12	FSM	ENSG00000198252.12	ENST00000442123.6	4554	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	132.387422937627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGGTGGTTGTATTA	-18	True	NA	-14	True	ATTAAA	-11	NA	52730179	52774941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52730211_52730458_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_51782.known	chr14	+	4864	11	FSM	ENSG00000198252.12	ENST00000354586.5	4864	11	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_7	34.580341236026	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAAAGCTCATTCATA	-32	True	NA	34	True	ATTAAA	-27	NA	52730165	52774989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_51792.nnic	chr14	-	2294	7	NNC	ENSG00000100522.10	novel	3867	6	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	195.285830401377	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	13	True	NA	-23	True	AATAAA	-18	NA	52791635	52775192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_52775942_52777542_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_51796.nnic	chr14	-	3084	7	NNC	ENSG00000100522.10	novel	2317	7	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.285830401377	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTTGCCTGGACTACA	NA	False	NA	-26	True	AATAAA	-15	NA	52791711	52775195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_52775947_52776830_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_51799.known	chr14	-	785	7	FSM	ENSG00000100522.10	ENST00000557604.1	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	231.274488192902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAAGTTTGGATATA	-20	True	NA	NA	False	NA	NA	NA	52791668	52778374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52787832_52787872_52791427
transcript_51803.known	chr14	-	3867	6	FSM	ENSG00000100522.10	ENST00000216410.8	3867	6	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_4	40.7754828297594	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	41	True	NA	-23	True	AATAAA	-18	NA	52791607	52775192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_51816.known	chr14	-	3247	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_13	52.3949106943286	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTTTTGTACTTG	247	False	NA	-9	True	AATAAA	-17	NA	52950992	52857274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_51820.known	chr14	-	3286	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	124.994203947256	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTACTTGTT	3	True	NA	-7	True	AATAAA	-19	NA	52951050	52857272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_51825.known	chr14	-	555	5	FSM	ENSG00000073712.15	ENST00000557562.1	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	197.330148482182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAGAAGAAGC	328	False	NA	NA	False	AAGAAA	-15	NA	52950911	52893375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52893428_52919122_52919357_52948561_52948581_52950411_52950578_52950827
transcript_51826.nic	chr14	-	811	4	ISM	ENSG00000073712.15	ENST00000399304.7	2082	15	-244	33871	-212	0	5prime_fragment	FALSE	canonical	3	458	junction_1	37.7977071615021	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGATGACCAGTCTGAA	NA	False	NA	NA	False	AAAAAG	-5	NA	52951262	52893358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_52893428_52919122_52919357_52950411_52950578_52950920
transcript_51830.known	chr14	+	1433	1	FSM	ENSG00000288045.1	ENST00000657782.1	1433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACGGAAGTTTTTTCT	NA	False	NA	NA	False	AATACA	-31	NA	52951431	52952864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52951400_52952900
transcript_51833.known	chr14	-	12941	13	FSM	ENSG00000100523.16	ENST00000673822.2	12941	13	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	15.2704780540755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTCTCAATAATTGCA	-73	True	NA	NA	False	ATTAAA	-15	NA	53153323	53036754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53046950_53051843_53051928_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103682_53103857_53152260
transcript_51834.known	chr14	-	698	2	FSM	ENSG00000100523.16	ENST00000557445.1	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAATCTTTAATT	850	False	NA	NA	False	NA	NA	NA	53152400	53103298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53103857_53152260
transcript_51838.known	chr14	-	1931	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	10.4986771653491	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-1	True	NA	-2	True	AATAAA	-25	NA	53956825	53949735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
transcript_51839.known	chr14	-	1708	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	11.115554667022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	1958	False	NA	-2	True	AATAAA	-25	NA	53956811	53949735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
transcript_51841.known	chr14	-	1784	4	FSM	ENSG00000125378.16	ENST00000417573.5	1784	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.739839372653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATGATTTTTTTTTTC	4217	False	NA	-5	True	AATAAA	-22	NA	53954552	53949738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53954420
transcript_51845.known	chr14	-	1705	3	FSM	ENSG00000125378.16	ENST00000558984.1	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCATGATTTTTTTTT	5314	False	NA	-7	True	AATAAA	-20	NA	53953455	53949740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53950889_53951852_53952230_53953275
transcript_51846.known	chr14	+	874	9	NNC	ENSG00000100526.21	novel	938	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	337.059689632267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCGTTGTGTCTCTTT	0	True	NA	12	True	NA	NA	NA	54396954	54420214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411686_54412834_54412841_54415898_54415931_54417847_54417952_54419991
transcript_51847.known	chr14	+	938	9	FSM	ENSG00000100526.21	ENST00000556102.6	938	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	328.849889767353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	10	True	NA	16	True	NA	NA	NA	54397002	54420218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213_54418307_54419991
transcript_51848.known	chr14	+	841	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	49.2034510155206	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	14	True	NA	16	True	NA	NA	NA	54397006	54420218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_51852.nic	chr14	+	815	7	NIC	ENSG00000100526.21	novel	841	8	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	254.572026481047	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	-5	True	NA	16	True	NA	NA	NA	54396949	54420218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_51857.known	chr14	-	4735	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_1	42.1040378111174	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTAGTTTATGCAT	-14	True	NA	-20	True	AATAAA	-17	NA	54441374	54423560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
transcript_51858.known	chr14	-	856	4	FSM	ENSG00000100528.12	ENST00000557659.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	327.667853507515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGATGATTATATATGGATA	-16	True	NA	-74	True	NA	NA	NA	54441376	54427328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54427842_54430260_54430405_54436368_54436438_54441246
transcript_51859.known	chr14	-	1233	4	FSM	ENSG00000100528.12	ENST00000395573.8	1233	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	350.314461908472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTTTCAGTGCAT	-31	True	NA	-18	True	AATAAA	-12	NA	54441391	54426935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54427842_54432107_54432221_54436368_54436438_54441246
transcript_51861.known	chr14	-	4125	7	FSM	ENSG00000197045.13	ENST00000616146.4	4125	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	398.317468303306	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTCCAGCTTTTCT	-4	True	NA	-30	True	AATAAA	-12	NA	54489026	54474490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54478160_54479785_54479860_54480873_54480956_54481407_54481459_54482152_54482203_54483670_54483768_54488924
transcript_51862.nic	chr14	-	4163	7	NIC	ENSG00000197045.13	novel	4085	7	NA	NA	-29	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	398.317468303306	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCTTTTCTTTTTTT	NA	False	NA	-24	True	AATAAA	-18	NA	54489055	54474484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_54478160_54479785_54479860_54480873_54480960_54481408_54481459_54482152_54482203_54483670_54483768_54488924
transcript_51865.nic	chr14	-	1509	7	NIC	ENSG00000197045.13	novel	4085	7	NA	NA	-29	719	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	398.317468303306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAACTATCTGCTTGCAT	NA	False	NA	-8	True	AATAAA	-22	NA	54489055	54477138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_54478160_54479785_54479860_54480873_54480960_54481408_54481459_54482152_54482203_54483670_54483768_54488924
transcript_51869.known	chr14	+	2092	7	FSM	ENSG00000100532.13	ENST00000679557.1	2092	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	115.645531210198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCTTCTGAATAGTAA	-16	True	NA	-6	True	AATAAA	-4	NA	54509905	54539271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530612_54530764_54530902_54531051_54537721_54537830_54538062
transcript_51873.known	chr14	+	1962	6	FSM	ENSG00000100532.13	ENST00000216420.12	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	20.519259245889	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	-16	True	NA	15	True	AATAAA	-25	NA	54509905	54539292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_51877.known	chr14	+	622	5	FSM	ENSG00000100532.13	ENST00000557755.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	115.361117799716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAATTCCTCTTCAGA	-10	True	NA	NA	False	NA	NA	NA	54509911	54538098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510064_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_51884.nic	chr14	+	2733	12	NIC	ENSG00000020577.14	novel	6833	12	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	2.22680885707562	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTTATTTTGTCATTT	758	False	NA	9	True	NA	NA	NA	54566074	54789127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_54566311_54567495_54568113_54702061_54702581_54748814_54748925_54751450_54751538_54760160_54760495_54764454_54764541_54770103_54770223_54774933_54775136_54776413_54776541_54784536_54784621_54788915
transcript_51887.known	chr14	-	2916	6	FSM	ENSG00000131979.20	ENST00000491895.7	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2.03960780543711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTGAAAGTTGTTTC	-2	True	NA	-13	True	ATTAAA	-14	NA	54902826	54842016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
transcript_51889.known	chr14	-	1977	7	FSM	ENSG00000131979.20	ENST00000395514.5	1977	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.3575377028545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTTTCTTTTTCAAC	0	True	NA	-4	True	ATTAAA	-23	NA	54902824	54842007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54843055_54844000_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
transcript_51891.known	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	108.420485149256	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-24	True	NA	-16	True	AATAAA	-18	NA	55027099	54938948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_51897.known	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	138.385532320238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-30	True	NA	-18	True	ATTAAA	-29	NA	55027105	54941158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
transcript_51900.nic	chr14	-	3077	24	ISM	ENSG00000198554.12	ENST00000360586.8	6019	26	-2	16675	-2	-14353	5prime_fragment	FALSE	canonical	0	0	junction_9	111.532307321957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAAATGTATTATCTG	-26	True	NA	NA	False	AATAAA	-24	NA	55027101	54955623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_51908.nic	chr14	-	2578	19	ISM	ENSG00000198554.12	ENST00000360586.8	6019	26	-6	24050	0	-21728	5prime_fragment	FALSE	canonical	0	0	junction_4	118.407866459565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAGAAGAAGA	-30	True	NA	-19	True	NA	NA	NA	55027105	54962998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_51916.known	chr14	+	6903	3	FSM	ENSG00000180008.9	ENST00000555846.2	6903	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGTTTTATTTTAA	-13	True	NA	17	True	ATTAAA	-22	NA	55027235	55049489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55027472_55031862_55031992_55042951
transcript_51920.known	chr14	+	6779	2	FSM	ENSG00000180008.9	ENST00000395472.2	6779	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	-19	True	NA	16	True	ATTAAA	-21	NA	55027229	55049488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55027472_55042951
transcript_51926.known	chr14	+	6466	4	FSM	ENSG00000168175.15	ENST00000395468.9	6466	4	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	85.8305824801911	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTCTTTTTTTCCTG	-26	True	NA	NA	False	NA	NA	NA	55051646	55070194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615
transcript_51934.known	chr14	+	958	6	FSM	ENSG00000131981.16	ENST00000254301.14	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	10.5375518978556	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCATTTAATTGGAGTG	1	True	NA	19	True	AATAAA	-26	NA	55129251	55145423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55145115
transcript_51938.known	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	324.359133747501	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	24	True	NA	12	True	AATAAA	-36	NA	55191544	55148111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_51945.known	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_6	116.728502131555	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-17	True	NA	-11	True	AATAAA	-13	NA	55191585	55148134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_5195.known	chr1	+	1217	7	FSM	ENSG00000117640.18	ENST00000524618.5	1217	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	87.2257607208635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGGCTTGTGATTTGAC	15	True	NA	-55	True	NA	NA	NA	25819985	25832211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823620_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_51956.nic	chr14	-	2386	17	ISM	ENSG00000126787.13	ENST00000247191.7	2881	19	-36	3702	-13	-1509	5prime_fragment	FALSE	canonical	3	963	junction_4	111.975932123827	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATTTCAGATGTTGT	NA	False	NA	NA	False	NA	NA	NA	55191621	55151836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_51961.nic	chr14	-	718	5	ISM	ENSG00000126787.13	ENST00000247191.7	2881	19	-36	33100	-13	-579	5prime_fragment	FALSE	canonical	3	1169	junction_3	79.3485192048346	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGTCAGACAAAGAGAAAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	55191621	55181234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_51962.nnic	chr14	-	3677	11	NNC	ENSG00000126775.9	novel	4715	10	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.5143536915779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTGCTCATGTGTATG	69	False	NA	-8	True	AATAAA	-11	NA	55411842	55366393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_55367476_55368522_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_51963.known	chr14	+	3094	5	FSM	ENSG00000178974.11	ENST00000681074.1	3094	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	49.1273854382665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAGCACTCCGTGTTGA	-41	True	NA	-86	True	NA	NA	NA	55271370	55370053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55271538_55350380_55352871_55354500_55354586_55355063_55355223_55369860
transcript_51965.nic	chr14	-	407	4	ISM	ENSG00000126775.9	ENST00000247178.6	4715	10	-12	24542	-12	-24541	5prime_fragment	FALSE	canonical	3	48	junction_1	9.0921211313239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATGAAGAAATGGAGAA	69	False	NA	NA	False	AAAACA	-14	NA	55411842	55390932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_55390993_55395939_55395983_55397371_55397435_55411601
transcript_51967.known	chr14	+	3348	2	FSM	ENSG00000178974.11	ENST00000313833.5	3348	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTTTTGCAAAGATTT	9	True	NA	11	True	AATAAA	-21	NA	55271420	55353611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55271538_55350380
transcript_5197.known	chr1	+	1953	7	FSM	ENSG00000117640.18	ENST00000374303.7	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	25.0826411864638	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	-17	True	NA	13	True	ATTAAA	-21	NA	25819953	25832938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_51970.known	chr14	-	4715	10	FSM	ENSG00000126775.9	ENST00000247178.6	4715	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	9.91071249821234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCATGTGTATGTCT	0	True	NA	-5	True	AATAAA	-14	NA	55411830	55366390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_51971.known	chr14	+	3515	3	FSM	ENSG00000178974.11	ENST00000681904.1	3515	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTAAATGGAACCCAAGT	-42	True	NA	-2	True	AATAAA	-8	NA	55271369	55353598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55271538_55332816_55332946_55350380
transcript_51972.known	chr14	+	577	2	FSM	ENSG00000178974.11	ENST00000554940.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAAGGTACAGGTGGA	11	True	NA	NA	False	NA	NA	NA	55271422	55350864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55271538_55350402
transcript_51974.known	chr14	+	4728	44	FSM	ENSG00000126777.18	ENST00000395314.8	4728	44	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_39	199.320286292823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	-19	True	NA	31	True	AATAAA	-20	NA	55580206	55684579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
transcript_51977.known	chr14	+	4449	42	FSM	ENSG00000126777.18	ENST00000438792.6	4449	42	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_32	147.370693682073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	41	False	NA	31	True	AATAAA	-20	NA	55580314	55684579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
transcript_5198.known	chr1	+	1868	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	83.9880943943843	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	32	True	NA	13	True	ATTAAA	-21	NA	25820002	25832938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
transcript_5199.known	chr1	+	1873	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	82.8869712319132	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCCATCTCTTG	3486	False	NA	17	True	ATTAAA	-25	NA	25819928	25832942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
transcript_51993.nic	chr14	+	1302	6	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	-43	56550	-43	-9312	5prime_fragment	FALSE	canonical	3	793	junction_4	53.1774388251258	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACATTCTTATGTACG	NA	False	NA	15	True	NA	NA	NA	55580163	55628029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911
transcript_51995.nic	chr14	+	516	3	ISM	ENSG00000126777.18	ENST00000395308.5	4134	43	-132	68471	-15	17	5prime_fragment	FALSE	canonical	3	133	junction_1	9	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAATGGAAACCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	55580191	55612247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55601756_55601881_55612018
transcript_51996.nic	chr14	+	682	3	ISM	ENSG00000126777.18	ENST00000395308.5	4134	43	-132	68305	-15	140	5prime_fragment	FALSE	canonical	3	133	junction_1	9	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGCTTGAAGAGCAGG	NA	False	NA	NA	False	AAAAAG	-18	NA	55580191	55612413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55601756_55601881_55612018
transcript_51997.nic	chr14	+	420	2	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	-43	72332	-43	17	5prime_fragment	FALSE	canonical	3	799	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAATGGAAACCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	55580163	55612247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018
transcript_51998.nic	chr14	+	586	2	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	-43	72166	-43	140	5prime_fragment	FALSE	canonical	3	799	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGCTTGAAGAGCAGG	NA	False	NA	NA	False	AAAAAG	-18	NA	55580163	55612413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018
transcript_51999.known	chr14	-	1465	3	FSM	ENSG00000186615.12	ENST00000335142.6	1534	3	69	0	22	0	multi-exon	FALSE	canonical	3	23	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATTAAAATGTGAAT	181	False	NA	-36	True	NA	NA	NA	55580074	55576185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55577380_55578605_55578738_55579935
transcript_52.known	ERCC-00148	+	478	1	FSM	ERCC-00148A	DQ883642	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00148_+_0_500
transcript_52003.known	chr14	+	5871	6	FSM	ENSG00000139946.10	ENST00000267460.9	5871	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	9.2520268049763	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTATTTCTCGTGACA	29	True	NA	7	True	ATTAAA	-20	NA	56118410	56301524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_56118738_56178334_56178465_56279675_56279778_56288436_56288635_56290267_56290457_56296599
transcript_52008.known	chr14	+	4259	16	FSM	ENSG00000070269.14	ENST00000261556.11	4259	16	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_10	15.5369094595919	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTCTTTATTGGTTCA	1	True	NA	32	True	AATAAA	-22	NA	56579797	56649515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_56580075_56585000_56585033_56585760_56585913_56603814_56603993_56605569_56605684_56609105_56609286_56612244_56612286_56615943_56616028_56617182_56617298_56618593_56618764_56621530_56621703_56625381_56625531_56632994_56633172_56634898_56634953_56636507_56636599_56647242
transcript_52026.known	chr14	+	2572	7	FSM	ENSG00000070269.14	ENST00000557657.5	2572	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	12.5620681241408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTGAGATGGCGT	2	True	NA	NA	False	NA	NA	NA	56579824	56613910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_56580075_56585000_56585033_56585760_56585913_56603814_56603993_56605569_56605684_56609105_56609286_56612244
transcript_52030.known	chr14	-	2956	5	FSM	ENSG00000165588.19	ENST00000339475.10	2956	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	441.887711981223	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-1	True	NA	-3	True	AATGAA	-19	NA	56810448	56799904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56810375
transcript_52031.known	chr14	-	2154	5	FSM	ENSG00000165588.19	ENST00000673035.1	2154	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	456.664195552925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTATAATTATATTAAAA	79	False	NA	3	True	CATAAA	-25	NA	56816693	56800740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56816586
transcript_52032.known	chr14	-	3011	5	FSM	ENSG00000165588.19	ENST00000672264.2	3011	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	400.064604157878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-7	True	NA	-3	True	AATGAA	-19	NA	56810479	56799904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804364_56805359_56805576_56810158_56810223_56810375
transcript_52038.known	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	863	junction_2	77	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-5	True	NA	-15	True	ATTAAA	-16	NA	56805667	56800706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804340_56805359
transcript_52039.known	chr14	-	908	3	FSM	ENSG00000165588.19	ENST00000554845.2	1086	3	0	178	0	-103	multi-exon	FALSE	canonical	3	170	junction_2	423.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAGTCCCCAGCTTCTC	6556	False	NA	NA	False	NA	NA	NA	56805648	56801912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804364_56805359
transcript_52043.known	chr14	-	835	2	FSM	ENSG00000165588.19	ENST00000554788.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCTTAACTTCAATGC	6556	False	NA	NA	False	NA	NA	NA	56805648	56801809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56805359
transcript_52046.known	chr14	-	10486	18	FSM	ENSG00000070367.16	ENST00000621441.5	10486	18	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_5	53.4762502664552	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAATTGTTGTTTTTG	-40	True	NA	-4	True	AATAAA	-18	NA	57268905	57200506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_52053.known	chr14	-	772	5	FSM	ENSG00000070367.16	ENST00000554598.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	50.0949099210688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATGATTTTCTTTGCC	42	True	NA	NA	False	AATAAA	-13	NA	57268823	57239527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_52054.known	chr14	-	594	4	FSM	ENSG00000070367.16	ENST00000555749.5	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	36.7544403968948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGAGCTGCAATAATT	6654	False	NA	NA	False	GATAAA	-31	NA	57268725	57244112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57244360_57246710_57246859_57247617_57247713_57268621
transcript_52058.known	chr14	+	11675	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	31.9948975523872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAAGTGTTTTATA	0	True	NA	7	True	AATAAA	-17	NA	57268970	57298742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_5206.known	chr1	+	2099	7	FSM	ENSG00000117640.18	ENST00000374301.7	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	90.3451714260369	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	-11	True	NA	13	True	ATTAAA	-21	NA	25820192	25832938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820415_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_52062.known	chr14	+	1691	2	FSM	ENSG00000053770.12	ENST00000554931.1	1691	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGAGAGAGACAGGC	-1	True	NA	NA	False	NA	NA	NA	57268923	57275469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_57269389_57274243
transcript_52067.known	chr14	+	7600	5	FSM	ENSG00000139977.14	ENST00000556492.6	7600	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	18.6077940659284	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGACTTAACTAGGTAAA	-9	True	NA	11	True	AATAAA	-24	NA	57390585	57415906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_57390706_57390956_57391729_57396751_57396876_57399827_57399884_57409378
transcript_52074.known	chr14	+	1294	4	FSM	ENSG00000139977.14	ENST00000555166.5	1294	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	105.607238809131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAAGAGATAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	57390543	57410330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_57390706_57396751_57396876_57399827_57399884_57409378
transcript_52082.nic	chr14	+	3314	2	ISM	ENSG00000139977.14	ENST00000556492.6	7600	5	-22	21778	20	-15803	5prime_fragment	FALSE	canonical	3	201	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAATGTGAGACACTTT	NA	False	NA	NA	False	NA	NA	NA	57390563	57394128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_57390706_57390956
transcript_52083.known	chr14	-	1940	8	FSM	ENSG00000151812.15	ENST00000556826.6	1940	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.728431359084683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTCTGATTTTTTTA	-5	True	NA	NA	False	ATTAAA	-17	NA	57866092	57563919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57564377_57566474_57566565_57569787_57569981_57571893_57572020_57581213_57581434_57589215_57589514_57593938_57594125_57865722
transcript_52086.known	chr14	-	6495	8	FSM	ENSG00000139971.15	ENST00000267485.7	6495	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	11.7438650940369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGGCCTGGTAGCGC	-14	True	NA	NA	False	AATACA	-6	NA	58152213	58000760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58004805_58005047_58005183_58012118_58012151_58096723_58096982_58131511_58131722_58133089_58133342_58137989_58139415_58152074
transcript_52091.known	chr14	-	2380	5	FSM	ENSG00000139971.15	ENST00000334342.5	2380	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	30.62984655528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGGAGAGAACTGAATAA	16	True	NA	NA	False	AAAAAG	-21	NA	58152183	58116123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58116508_58131511_58131722_58133089_58133342_58137989_58139415_58152074
transcript_52093.nic	chr14	-	2331	4	ISM	ENSG00000139971.15	ENST00000334342.5	2380	5	-30	15083	0	0	5prime_fragment	FALSE	canonical	3	71	junction_2	7.78888096369861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAATTCATTTTCATATG	-14	True	NA	-9	True	AATAAA	-21	NA	58152213	58131206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_58131722_58133089_58133342_58137989_58139415_58152074
transcript_52095.nic	chr14	-	1826	2	ISM	ENSG00000139971.15	ENST00000334342.5	2380	5	-30	21604	0	1373	5prime_fragment	FALSE	canonical	3	88	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAGCATACAAATACAT	-14	True	NA	NA	False	AATAAA	-30	NA	58152213	58137727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_58139415_58152074
transcript_52097.known	chr14	+	2408	13	FSM	ENSG00000131966.14	ENST00000254286.9	2408	13	0	0	0	0	multi-exon	FALSE	non_canonical	2	206	junction_5	67.9362446219493	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTCATTCTTT	3	True	NA	16	True	AATGAA	-17	NA	58200148	58235636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_52100.known	chr14	+	540	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_3	17.2111075245674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGTATGGCACACAG	24	True	NA	NA	False	AATAAA	-18	NA	58200169	58209257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
transcript_52101.known	chr14	+	1602	13	FSM	ENSG00000131966.14	ENST00000545307.6	1602	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	115.394853534385	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTATATCAATAAAGTA	NA	False	NA	-16	True	NA	NA	NA	58200079	58234760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211411_58213640_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_52102.known	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_10	227.092161907891	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	-23	True	NA	26	True	ATTAAA	-15	NA	58244842	58272004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_52103.known	chr14	+	908	11	FSM	ENSG00000100567.13	ENST00000412908.6	908	11	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_5	841.219329307167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTAATATCTGCTTT	11	True	NA	34	True	ATTAAA	-23	NA	58244876	58272012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260968_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_52111.known	chr14	+	925	5	FSM	ENSG00000100567.13	ENST00000553665.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2522	junction_3	260.745445789567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTTCAATAGT	-10	True	NA	NA	False	AATAGA	-33	NA	58244855	58258454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924
transcript_52113.known	chr14	-	741	5	FSM	ENSG00000257621.9	ENST00000554378.5	741	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.9343210784909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAACCCAGGAGGCAG	-9	True	NA	NA	False	NA	NA	NA	58298134	58267103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58267394_58273978_58274011_58285590_58285757_58291634_58291708_58297954
transcript_52116.known	chr14	-	1039	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	34.6538437823121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTAAGCATTCTTTC	23	False	NA	NA	False	NA	NA	NA	58298102	58266607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
transcript_52120.known	chr14	+	435	2	FSM	ENSG00000100567.13	ENST00000554456.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGAATCCTTCAGTT	8	True	NA	2	True	AATAAA	-17	NA	58244873	58245478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58244942_58245111
transcript_52122.known	chr14	+	5562	23	FSM	ENSG00000032219.19	ENST00000348476.7	5562	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	14.1482703437208	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGCTTTATACTTTTAGT	-38	True	NA	5	True	AATAAA	-45	NA	58298503	58373730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072_58351324_58353657_58353856_58359131_58359217_58360900_58361043_58364169_58365301_58365517_58365623_58366882_58367030_58371885
transcript_5213.known	chr1	-	2161	3	FSM	ENSG00000127423.11	ENST00000374298.4	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	7	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGTGATAATTGGTAA	-49	True	NA	-12	True	AATAAA	-14	NA	25859457	25834005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25835847_25837412_25837555_25859279
transcript_52135.known	chr14	+	8558	31	FSM	ENSG00000100578.18	ENST00000652326.2	8558	31	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	10.8962786715873	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATATGTTTCTTATTG	6	True	NA	NA	False	AATAAA	-23	NA	58427718	58551297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
transcript_52138.known	chr14	-	1252	6	FSM	ENSG00000100575.14	ENST00000395159.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	78.6318001828777	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATGCATGATCCTTTT	-5	True	NA	-6	True	CATAAA	-19	NA	58427531	58408494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053_58427243_58427391
transcript_52139.known	chr14	-	448	5	FSM	ENSG00000100575.14	ENST00000555930.6	448	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	82.8100235478773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGGACTCATCTGATA	-6	True	NA	NA	False	NA	NA	NA	58427146	58408978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58409085_58410842_58410939_58411906_58411972_58424007_58424096_58427053
transcript_52142.known	chr14	-	1075	5	FSM	ENSG00000100575.14	ENST00000216463.8	1075	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	99.9334153324102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACGTTGAAATGTTTT	-1	True	NA	16	True	NA	NA	NA	58427527	58408602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58409169_58410842_58410939_58424007_58424096_58427053_58427243_58427391
transcript_52145.known	chr14	+	2571	4	FSM	ENSG00000165617.15	ENST00000335867.4	2571	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	25.2498624858742	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTCCCTAGTTGCCA	150	False	NA	NA	False	NA	NA	NA	58638178	58647170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645257
transcript_52146.known	chr14	+	3828	4	FSM	ENSG00000165617.15	ENST00000395153.8	3828	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	17.7200451466693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTGGTTATTGGTG	-20	True	NA	5	True	TATAAA	-23	NA	58637961	58648321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645368
transcript_52149.known	chr14	+	376	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGATCGTCAGATACAT	22	False	NA	NA	False	NA	NA	NA	58794653	58795029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58794700_58795000
transcript_5215.known	chr1	-	2307	1	FSM	ENSG00000228172.5	ENST00000536896.2	2307	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATGCCTGTCTCAGGC	NA	False	NA	NA	False	AAAACA	-16	NA	25820797	25818490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25818500_25820800
transcript_52150.known	chr14	+	5890	25	FSM	ENSG00000100592.16	ENST00000360909.8	5890	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_14	13.5968107984516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	-29	True	NA	22	True	AATAAA	-22	NA	59188666	59371403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
transcript_52152.nic	chr14	+	3119	24	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-35	3856	-14	0	5prime_fragment	FALSE	canonical	3	93	junction_14	13.406541303276	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGAGAAAGAAAAAGGAGG	NA	False	NA	NA	False	AAGAAA	-8	NA	59188631	59367547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428
transcript_5216.known	chr1	-	2685	3	FSM	ENSG00000182749.6	ENST00000675840.1	2685	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTTGTCTCC	-3	True	NA	-2	True	AATAAA	-19	NA	25875708	25861483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25863862_25870608_25870695_25875487
transcript_52165.known	chr14	+	582	3	FSM	ENSG00000100592.16	ENST00000556135.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAACCATCATTCATAA	3	True	NA	NA	False	NA	NA	NA	59188698	59291508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59188769_59263440_59263661_59291216
transcript_52167.known	chr14	+	2844	2	FSM	ENSG00000100592.16	ENST00000556596.1	2844	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAAG	NA	False	NA	NA	False	TTTAAA	-36	NA	59188645	59266161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59188769_59263440
transcript_52170.known	chr14	+	2347	7	FSM	ENSG00000050130.18	ENST00000616435.5	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	102.788888288353	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	-7	True	NA	75	True	ATTAAA	-21	NA	59484516	59505410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59484594_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_52173.known	chr14	+	2137	7	FSM	ENSG00000050130.18	ENST00000554271.5	2137	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	238.39509689216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	21	True	NA	7	True	AATAAA	-15	NA	59484544	59504705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59485117_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_52179.nic	chr14	-	1468	6	NIC	ENSG00000126790.12	novel	1516	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	33.5583074662594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTCATTCTTTGTAAAA	7	True	NA	NA	False	AATAAA	-16	NA	59484400	59472862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_59473091_59474438_59474527_59475868_59476007_59476091_59476215_59479181_59479352_59483679
transcript_52180.nic	chr14	-	1382	5	NIC	ENSG00000126790.12	novel	1516	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_4	25.791229129299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCATTCTTTGTAAAATA	7	True	NA	NA	False	AATAAA	-18	NA	59484400	59472860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483679
transcript_52181.known	chr14	-	1516	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	27.5227178890458	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-1	True	NA	NA	False	ATTAAA	-34	NA	59484408	59472605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
transcript_52183.known	chr14	-	758	4	FSM	ENSG00000126790.12	ENST00000481608.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	26.7124606795322	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGCACCCTTAGCTT	401	False	NA	NA	False	NA	NA	NA	59484006	59475868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59476007_59476091_59476215_59479181_59479352_59483679
transcript_52185.known	chr14	-	3239	9	FSM	ENSG00000139970.18	ENST00000267484.10	3239	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	10.7325439668328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTCTCCCTCTCTTCT	17	True	NA	-7	True	AATAAA	-15	NA	59870776	59595982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59726918_59727669_59745707_59746482_59870389
transcript_52187.known	chr14	-	1703	7	FSM	ENSG00000139970.18	ENST00000342503.8	1703	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	8.39477350630868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTCTCTTCTCATGCA	-1	True	NA	-1	True	AATAAA	-21	NA	59630814	59595976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59630445
transcript_52189.known	chr14	+	18069	11	FSM	ENSG00000126773.13	ENST00000406854.6	18069	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	32.2690253958808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	-42	True	NA	NA	False	AATAAA	-16	NA	60091922	60148221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60092420_60107585_60108328_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_52190.known	chr14	+	17339	10	FSM	ENSG00000126773.13	ENST00000317623.8	17339	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	22.7351905399732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	-54	True	NA	NA	False	AATAAA	-16	NA	60091910	60148221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60092420_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_52192.known	chr14	-	1956	7	FSM	ENSG00000100612.14	ENST00000557185.6	1956	7	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	12.3243210315574	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGCTTAGTATTAGT	-4	True	NA	NA	False	ATTAAA	-26	NA	60165398	60144118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60145014_60149352_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_52194.known	chr14	-	1361	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	13.4966662550424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAATAAATAAAAAA	4610	False	NA	-38	True	NA	NA	NA	60165293	60148947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_52195.known	chr14	-	563	2	FSM	ENSG00000100612.14	ENST00000555171.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTTCTGCCACCT	-24	True	NA	NA	False	NA	NA	NA	60165418	60155831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60156153_60165176
transcript_52201.nic	chr14	+	2577	7	NIC	ENSG00000100614.18	novel	8231	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	83.973540806349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCATGTATGTGTAAT	-20	True	NA	NA	False	AATAAA	-23	NA	60249229	60293355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_60249678_60277004_60277092_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_52202.known	chr14	+	8231	6	FSM	ENSG00000100614.18	ENST00000395076.9	8231	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	11.1175536877498	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTATTTATGATTG	-29	True	NA	NA	False	AATAAA	-16	NA	60249220	60299087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60249678_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_52205.nic	chr14	+	2251	3	ISM	ENSG00000100614.18	ENST00000395076.9	8231	6	-25	12549	-25	-2017	5prime_fragment	FALSE	canonical	3	186	junction_1	14	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATAGCGTTAAAA	-4	True	NA	NA	False	AAGAAA	-5	NA	60249195	60286538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_60249678_60282683_60283538_60285623
transcript_52211.known	chr14	-	2780	18	FSM	ENSG00000179008.9	ENST00000321731.8	2780	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.9215295678475	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATGTGACTGTTGA	-18	True	NA	NA	False	AATAAA	-14	NA	60486063	60435955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60437048_60442073_60442132_60455000_60455146_60456916_60457096_60458677_60458740_60461353_60461413_60461507_60461594_60465978_60466056_60466916_60467045_60468444_60468537_60469532_60469654_60471416_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_52218.known	chr14	-	6491	3	FSM	ENSG00000100625.9	ENST00000216513.5	6491	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	15	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGCATTGAAAATTATTT	-5	True	NA	-16	True	AATAAA	-18	NA	60724351	60709538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60714204_60719759_60720446_60723211
transcript_52219.known	chr14	+	2648	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_6	37.7164501543411	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTAGTTGCTATTGC	-9	True	NA	NA	False	AATAAA	-27	NA	60734760	60969965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_52222.known	chr14	+	1220	7	FSM	ENSG00000020426.11	ENST00000539616.6	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	163.191520068361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	6	True	NA	11	True	AATAAA	-16	NA	60734775	60968678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60879713_60879836_60968228
transcript_52225.nic	chr14	+	595	5	ISM	ENSG00000020426.11	ENST00000539616.6	1220	7	-35	156639	-1	3024	5prime_fragment	FALSE	canonical	3	390	junction_3	28.6912443090222	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACAAAGAAGATTATTTA	-29	True	NA	NA	False	NA	NA	NA	60734740	60812039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986
transcript_52226.known	chr14	+	1097	4	FSM	ENSG00000020426.11	ENST00000556764.5	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	30.4010233745876	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTTTTGAAAATATC	3	True	NA	NA	False	TATAAA	-36	NA	60734772	60809015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324
transcript_52227.nic	chr14	+	364	2	ISM	ENSG00000020426.11	ENST00000556764.5	1097	4	-32	12646	-1	-12059	5prime_fragment	FALSE	canonical	3	460	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTCCTGCTCGAAT	-29	True	NA	NA	False	AAAAAG	-11	NA	60734740	60796369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_60734952_60796216
transcript_52229.known	chr14	+	1605	16	FSM	ENSG00000139974.16	ENST00000267488.9	1605	16	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_15	12.6325857298584	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGGGTTGATCTTTTG	7	True	NA	NA	False	AAAAAG	-25	NA	60981244	61052630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
transcript_5223.known	chr1	-	948	5	FSM	ENSG00000117632.23	ENST00000426559.6	948	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1609.16676808216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCTTGCCTTGATGGT	-2	True	NA	NA	False	NA	NA	NA	25906466	25885439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25885870_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_52232.known	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	11.7127067751225	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-13	True	NA	0	True	AATAAA	-30	NA	60981079	60971440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
transcript_52237.known	chr14	+	3720	14	FSM	ENSG00000027075.17	ENST00000332981.11	3720	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	6.79888609045672	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGTTTTGACTAGAAT	-1	True	NA	7	True	AATAAA	-18	NA	61321578	61550976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61322465_61391224_61391289_61443110_61443262_61445691_61445727_61449163_61449253_61450841_61450972_61453225_61453354_61457175_61457320_61457505_61457680_61485501_61485657_61529074_61529214_61530406_61530596_61547742_61547887_61549684
transcript_52242.known	chr14	+	3922	15	FSM	ENSG00000100644.17	ENST00000394997.5	3922	15	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	213.126339842578	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	18	False	NA	19	True	AATAAA	-19	NA	61695539	61748258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61695840_61720378_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
transcript_52246.known	chr14	+	3555	14	FSM	ENSG00000100644.17	ENST00000323441.10	3555	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	245.731055178807	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	96	False	NA	19	True	AATAAA	-19	NA	61695776	61748258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61746933
transcript_5225.known	chr1	-	1712	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	1576.91904912713	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTGAAATGACTAA	852	False	NA	-45	True	AATAAA	-21	NA	25906153	25900117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
transcript_52253.nic	chr14	+	1634	10	ISM	ENSG00000100644.17	ENST00000337138.9	3946	15	-16	10095	-16	-2735	5prime_fragment	FALSE	canonical	3	685	junction_1	100.937946956546	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGAATATAAATTTGGC	4	True	NA	9	True	NA	NA	NA	61695496	61738163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086
transcript_52254.known	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	25.8929419812513	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	3	True	NA	13	True	AATAAA	-18	NA	61762419	61796428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
transcript_52260.nic	chr14	+	1038	8	ISM	ENSG00000023608.5	ENST00000216294.5	2593	10	-63	14073	-63	-14073	5prime_fragment	FALSE	canonical	3	172	junction_4	21.8033886151222	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAAACCAGCAGGAAGG	22	False	NA	NA	False	AAAAAG	-13	NA	61762356	61782355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246
transcript_5227.known	chr1	-	1443	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_4	446.224719171854	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTGTGAAATGACTAAAG	0	True	NA	-43	True	AATAAA	-23	NA	25906419	25900115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_52274.known	chr14	-	2164	14	FSM	ENSG00000154001.14	ENST00000555899.1	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	84.0690051870254	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCGGTCTTC	-2	True	NA	NA	False	NA	NA	NA	63543298	63375760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63376109_63382070_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539693_63542778
transcript_52280.nic	chr14	-	3095	13	NIC	ENSG00000154001.14	novel	6655	14	NA	NA	-7	-842	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	90.9118926335945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATCGTGACCAAATTG	-26	True	NA	NA	False	AATAAA	-25	NA	63543384	63374733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_63376109_63382055_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63539528_63539693_63542778
transcript_52283.nic	chr14	-	1917	13	ISM	ENSG00000154001.14	ENST00000555899.1	2164	14	-86	6295	-7	0	5prime_fragment	FALSE	canonical	3	180	junction_12	45.0342462281022	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTTAAAGCTTTTT	-26	True	NA	-1	True	NA	NA	NA	63543384	63382055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539693_63542778
transcript_52285.known	chr14	-	1690	12	FSM	ENSG00000154001.14	ENST00000553266.5	1690	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	93.5772099117944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTTAAAGCTTTTT	4	True	NA	-1	True	NA	NA	NA	63543354	63382055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63539528_63539693_63542778
transcript_52286.known	chr14	-	1687	3	FSM	ENSG00000140006.12	ENST00000267522.7	1687	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	48	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGACTTTTTAGAAGGA	9057	False	NA	-87	True	AGTAAA	-26	NA	63641407	63598501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63599974_63624927_63625034_63641298
transcript_52287.known	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	18.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-22	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63599974_63624927_63625034_63641803
transcript_52292.nic	chr14	+	296	2	FSM	ENSG00000274015.3	ENST00000686344.1	314	2	0	18	0	-18	multi-exon	FALSE	canonical	3	56	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	-8	True	NA	23	True	AATGAA	-27	NA	63642060	63651490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_63642198_63651331
transcript_52294.known	chr14	-	3336	3	FSM	ENSG00000126821.8	ENST00000247225.7	3336	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTTTTGCTTTGTTTTG	-11	True	NA	-15	True	AATAAA	-20	NA	63728065	63684215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63686657_63698568_63698659_63727260
transcript_52295.known	chr14	+	3229	24	FSM	ENSG00000054654.20	ENST00000674003.1	3229	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.80493758544162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAGCTTAGTGACAATA	43	False	NA	NA	False	AATAGA	-10	NA	63761898	63995099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_63761987_63852500_63852754_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736_63983887_63986455_63986618_63990410_63990570_63990941_63991116_63993834_63993970_63995043
transcript_52296.nic	chr14	+	3103	23	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-54	231333	-54	0	5prime_fragment	FALSE	canonical	0	0	junction_20	2.59688306492467	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAGCTTAGTGACAATA	NA	False	NA	NA	False	AATAGA	-10	NA	63852928	63995099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736_63983887_63986455_63986618_63990410_63990570_63990941_63991116_63993834_63993970_63995043
transcript_52297.nic	chr14	+	3161	23	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-54	231275	-54	58	5prime_fragment	FALSE	canonical	0	0	junction_20	2.59688306492467	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCCGTAGAGGAAGGAC	NA	False	NA	NA	False	AATAAA	-14	NA	63852928	63995157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736_63983887_63986455_63986618_63990410_63990570_63990941_63991116_63993834_63993970_63995043
transcript_52303.nic	chr14	+	4103	19	ISM	ENSG00000054654.20	ENST00000394768.6	11095	63	110714	-2	-10425	0	3prime_fragment	FALSE	canonical	3	79	junction_1	21.4695448956118	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	-24	True	NA	14	True	ATTAAA	-17	NA	64186328	64226432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
transcript_52304.nic	chr14	+	4100	19	NIC	ENSG00000054654.20	novel	21842	116	NA	NA	-10425	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	21.6036833850728	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	-24	True	NA	14	True	ATTAAA	-17	NA	64186328	64226432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
transcript_52306.nic	chr14	+	2297	18	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-54	242666	-54	-11333	5prime_fragment	FALSE	canonical	1	1	junction_2	2.18202788129311	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATCAGCCCACTTTTGA	NA	False	NA	NA	False	GATAAA	-5	NA	63852928	63983766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736
transcript_52307.nic	chr14	+	2417	18	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-54	242546	-54	-11213	5prime_fragment	FALSE	canonical	1	1	junction_2	2.18202788129311	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATAATCATACTTTGT	NA	False	NA	NA	False	TATAAA	-2	NA	63852928	63983886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736
transcript_52313.known	chr14	-	1717	3	FSM	ENSG00000214770.3	ENST00000359491.1	1717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTTCATCTCAAAAAAA	11	False	NA	NA	False	NA	NA	NA	64338599	64335834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64336721_64337400_64337530_64337897
transcript_52320.known	chr14	+	3154	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_8	123.394990705209	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	18	True	NA	9	True	AATAAA	-38	NA	64388352	64460025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_52328.known	chr14	+	6814	27	FSM	ENSG00000100714.17	ENST00000545908.6	6814	27	0	0	0	0	multi-exon	TRUE	canonical	2	40	junction_26	309.628315544593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCAGTTCCCTTTT	114	False	NA	6	True	AATAAA	-19	NA	64388030	64463457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64459758
transcript_52339.known	chr14	+	3082	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_8	106.63324809833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGTAGTGCTAACAT	27	True	NA	47	True	NA	NA	NA	64388361	64455173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
transcript_5234.known	chr1	-	2947	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_3	513.595387656687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTTG	2	True	NA	-15	True	AATAAA	-17	NA	25906417	25900567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
transcript_52356.known	chr14	+	2063	16	FSM	ENSG00000100714.17	ENST00000555709.7	2063	16	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_6	392.073405825434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTATAACATTTATTTTA	-24	True	NA	NA	False	GATAAA	-18	NA	64388310	64439581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095
transcript_52363.known	chr14	-	10365	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	17.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGTGTCCTTTCATG	-20	True	NA	-4	True	AATAAA	-18	NA	64503838	64478050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64488058_64490360_64490541_64503660
transcript_52365.known	chr14	+	3642	2	FSM	ENSG00000126804.14	ENST00000683701.1	3642	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTAATGTGAATTAC	-14	True	NA	NA	False	AATAAA	-19	NA	64504769	64524951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64504947_64521486
transcript_52368.known	chr14	+	2497	1	FSM	ENSG00000126803.10	ENST00000247207.7	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	881	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTCTTGGAGTTTTC	-1	True	NA	17	True	AGTAAA	-19	NA	64540740	64543237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64540700_64543200
transcript_52369.known	chr14	-	6839	32	FSM	ENSG00000070182.21	ENST00000389720.4	6839	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	4.1022315695431	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGATGATTAGTGCAT	3	True	NA	0	True	TATAAA	-32	NA	64879907	64766398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64766802_64767302_64767353_64767662_64767860_64769033_64769119_64769589_64769729_64770884_64771130_64772579_64772955_64773219_64773425_64774396_64774528_64775124_64775404_64779156_64779247_64779724_64779932_64782289_64782554_64784246_64784394_64785536_64785628_64785748_64785952_64786403_64787161_64791718_64791857_64792996_64793868_64794466_64794618_64795336_64795640_64796556_64796716_64797728_64797847_64799746_64799935_64800755_64800869_64801284_64801401_64801753_64801835_64802225_64802318_64803606_64803781_64804938_64805091_64822946_64823146_64879791
transcript_52375.nic	chr14	+	4937	18	NIC	ENSG00000126822.18	novel	10526	17	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	13.7679734683651	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTGAACTCCTTCCT	-52	True	NA	21	True	NA	NA	NA	64704384	64744345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738138_64738741_64738856_64741035_64742456_64742981
transcript_52376.nic	chr14	+	5199	18	NIC	ENSG00000126822.18	novel	4702	17	NA	NA	-73	-175	combination_of_known_junctions	TRUE	canonical	3	26	junction_15	12.6077364067083	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGGTATGATGTGCGT	584	False	NA	17	True	AATGAA	-23	NA	64704028	64744164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
transcript_52377.nic	chr14	+	5214	18	NIC	ENSG00000126822.18	novel	4702	17	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_15	12.6077364067083	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTGAACTCCTTCCT	23	False	NA	21	True	NA	NA	NA	64704194	64744345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
transcript_52383.known	chr14	+	10526	17	FSM	ENSG00000126822.18	ENST00000247226.13	10526	17	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_14	14.5472022653842	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTCTGATACATAGTAA	-13	True	NA	10	True	ATTAAA	-16	NA	64704423	64750249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64738741_64738856_64741035_64742456_64742981
transcript_52390.nnic	chr14	+	4521	16	NIC	ENSG00000126822.18	novel	10526	17	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_14	14.9205302259076	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTGAACTCCTTCCT	-26	True	NA	21	True	NA	NA	NA	64704410	64744345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64741035_64742456_64742981
transcript_5240.known	chr1	-	3487	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.74854825112421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTTGGCTTGCTCTT	7	True	NA	-6	True	AAAAAG	-16	NA	25998063	25959766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
transcript_52403.known	chr14	+	1468	14	FSM	ENSG00000125954.13	ENST00000549987.1	1468	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	685.574703847956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTATACGTTTCAATA	33	True	NA	NA	False	NA	NA	NA	64914492	65061361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_52405.known	chr14	+	1847	13	FSM	ENSG00000125954.13	ENST00000552941.6	1847	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	596.831960344693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGCCTCTGCCTCTCGA	25	True	NA	NA	False	NA	NA	NA	64914484	65061803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_52406.known	chr14	+	3518	4	FSM	ENSG00000258289.10	ENST00000549115.7	3518	4	0	0	0	0	multi-exon	FALSE	canonical	3	1695	junction_2	238.009803719651	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTTTTTACTT	-5	True	NA	16	True	AATAAA	-26	NA	64914454	64935368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64932137
transcript_52408.known	chr14	+	1023	4	FSM	ENSG00000258289.10	ENST00000551093.6	1023	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	940.650956637063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATTTGTTGAGATGAG	17	True	NA	NA	False	NA	NA	NA	64914476	64944056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64943298
transcript_5241.known	chr1	-	2523	11	FSM	ENSG00000158006.14	ENST00000374284.5	2523	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	14.4737693777399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCCACTCCCAGAGAGG	26	True	NA	NA	False	AATAAA	-18	NA	25998044	25960769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990922_25998024
transcript_52411.known	chr14	+	439	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	1058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCATATTTTTTTTC	NA	False	NA	54	True	AATACA	-41	NA	64914414	64932320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64932137
transcript_52413.known	chr14	+	1521	3	FSM	ENSG00000258289.10	ENST00000551947.6	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATCTCTGTCTCCAAA	-17	True	NA	NA	False	AATATA	-18	NA	64914442	64944591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64943298
transcript_52414.known	chr14	+	571	2	FSM	ENSG00000258289.10	ENST00000556089.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	2260	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACAGTATAATACCATG	-2	True	NA	NA	False	NA	NA	NA	64914457	64924484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990
transcript_52415.known	chr14	-	922	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCAGCCTGTGTGTGTGT	2	True	NA	NA	False	AATAAA	-16	NA	64942745	64939157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64939839_64942504
transcript_52416.known	chr14	-	1084	3	NNC	ENSG00000176153.13	novel	1134	3	NA	NA	-159	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTGTTCTTT	8093	False	NA	NA	False	AATAAA	-21	NA	64942905	64939152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_64939839_64942504_64942607_64942609
transcript_52420.known	chr14	-	3437	7	FSM	ENSG00000139998.16	ENST00000533601.7	3437	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	25.6168347424545	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGGCTGCCTGGATG	-44	True	NA	-5	True	AATAAA	-16	NA	64972336	64945815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64971952
transcript_52422.known	chr14	-	3109	7	FSM	ENSG00000139998.16	ENST00000554593.2	3109	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	146.757926153543	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAAACCACCGGTGTGG	4414	False	NA	-16	True	AATAAA	-5	NA	64972776	64945826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64972709
transcript_52426.known	chr14	+	2711	12	FSM	ENSG00000257365.8	ENST00000246166.3	2711	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	14.4239241115883	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	4	True	NA	8	True	AATAAA	-15	NA	64986894	65062650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_52429.known	chr14	-	623	6	FSM	ENSG00000125952.20	ENST00000553928.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	143.780944495437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAAAAACTGTCTGTCT	398	False	NA	NA	False	NA	NA	NA	65102360	65076457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077327_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_52433.known	chr14	-	2010	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	114.998913038341	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	241	False	65102536	-3	True	AATAAA	-17	NA	65102517	65075126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_52434.known	chr14	-	615	5	FSM	ENSG00000125952.20	ENST00000556979.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	140.662717164144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGACCTTCCAGGCTCA	241	False	65102536	NA	False	AATAAA	-22	NA	65102517	65077286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_52435.known	chr14	-	571	5	FSM	ENSG00000125952.20	ENST00000557746.5	571	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	169.175020319195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTTCCTCCCTCATGG	241	False	65102536	NA	False	NA	NA	NA	65102517	65077384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65077429_65077562_65077644_65077912_65078037_65093707_65093816_65102303
transcript_52438.known	chr14	-	1973	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	50.9901951359278	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	-8	True	NA	0	True	AATAAA	-20	NA	65102504	65075123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
transcript_52439.known	chr14	-	3155	4	FSM	ENSG00000125952.20	ENST00000284165.10	3155	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	115.034294403403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGAAGAATTGTCTTGCA	8	True	NA	-19	True	AATAAA	-18	NA	65102488	65075201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65078037_65093707_65093816_65101545_65101573_65102303
transcript_52442.known	chr14	-	574	4	FSM	ENSG00000125952.20	ENST00000555667.5	574	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	163.994579856233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATTAAATGGGTTG	241	False	65102536	NA	False	AATAAA	-8	NA	65102517	65077300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65102303
transcript_52443.known	chr14	-	897	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	57.0633176587396	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGTACCTCTTTTT	-13	True	NA	NA	False	AATAAA	-19	NA	65102509	65083743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
transcript_52445.known	chr14	-	585	3	FSM	ENSG00000125952.20	ENST00000556443.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_2	60	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGAGTGTTAGAGCCG	241	False	65102536	NA	False	NA	NA	NA	65102517	65077773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65078037_65093707_65093816_65102303
transcript_52449.known	chr14	+	5166	11	FSM	ENSG00000033170.17	ENST00000360689.9	5166	11	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	26.0478406014779	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	13	False	NA	15	True	AATAAA	-16	NA	65410591	65744121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_52450.known	chr14	+	4249	11	FSM	ENSG00000033170.17	ENST00000673929.1	4249	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	18.4813419426188	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	-40	True	NA	15	True	AATAAA	-16	NA	65412729	65744121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_52454.known	chr14	+	2858	11	FSM	ENSG00000033170.17	ENST00000674118.1	2858	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	38.7458384862168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCACTCTCCATTAG	-9	True	NA	-96	True	AATACA	-11	NA	65412980	65743028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733277_65733382_65742092
transcript_52459.nic	chr14	+	1850	8	ISM	ENSG00000033170.17	ENST00000674118.1	2858	11	-255	21053	-4	63	5prime_fragment	FALSE	canonical	3	77	junction_1	20.985903918233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGAAGCCACCAAGAAG	-44	True	NA	NA	False	AAAAAG	-4	NA	65412725	65721975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774
transcript_52462.known	chr14	-	1521	1	FSM	ENSG00000276116.2	ENST00000621019.2	1521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATGCATGGATGCT	1034	False	NA	NA	False	AATAAA	-16	NA	65412690	65411169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65411200_65412700
transcript_52465.known	chr14	+	3557	23	FSM	ENSG00000171723.16	ENST00000478722.6	3557	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	9.55324357534745	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGTGTTGGCCTCGTT	-5	True	NA	24	True	AATAAA	-27	NA	66508146	67181803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66924193_66924293_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
transcript_52469.known	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	12.8874642460756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	-1	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_52472.known	chr14	+	5006	15	FSM	ENSG00000072415.10	ENST00000555925.5	5006	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	20.4789588383306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAATTTCTCTTGCTA	-13	True	NA	21	True	AATAAA	-33	NA	67241422	67335819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67241534_67269700_67269784_67279249_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_52477.known	chr14	+	5405	16	FSM	ENSG00000072415.10	ENST00000676464.1	5405	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	28.184787070727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCAAATTTTAAAAGCC	32	False	NA	0	True	AATAAA	-12	NA	67241341	67335798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67241534_67254203_67254311_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_52478.nic	chr14	+	1863	11	ISM	ENSG00000072415.10	ENST00000677222.1	3730	13	-178	5454	-107	-5454	5prime_fragment	FALSE	canonical	3	58	junction_10	11.0131739294356	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAAAAGGTTTTAT	395	False	NA	NA	False	AATAAA	-3	NA	67241234	67317438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407
transcript_52483.known	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	23.9478600296561	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-13	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_52486.nic	chr14	-	769	8	ISM	ENSG00000100554.12	ENST00000216442.12	1599	9	-61	2568	-33	-1885	5prime_fragment	FALSE	canonical	3	445	junction_2	25.3699162998466	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGAAATTGGCAGTT	NA	False	NA	-4	True	NA	NA	NA	67359865	67340439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_52488.known	chr14	+	4154	8	FSM	ENSG00000134001.15	ENST00000256383.11	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_5	134.54898205274	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGATACAGACTTTTC	-10	True	NA	16	True	AATAAA	-18	NA	67360327	67386516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67360457_67364766_67365009_67374467_67374548_67376438_67376591_67380658_67380766_67381592_67381691_67382446_67382591_67383314
transcript_52490.known	chr14	-	1513	9	FSM	ENSG00000100558.9	ENST00000216446.9	1513	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	2.73861278752583	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCTCTTAACTTCTTT	-13	True	NA	-11	True	AATAAA	-16	NA	67412165	67386983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67387457_67388223_67388303_67390662_67390747_67392325_67392428_67392661_67392850_67393149_67393242_67395401_67395584_67397661_67397827_67412017
transcript_52493.known	chr14	+	6615	29	FSM	ENSG00000054690.14	ENST00000329153.10	6615	29	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	15.1217423545283	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTCTTTTGTAGGACA	-11	True	NA	29	True	AATAAA	-36	NA	67533289	67589612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67533399_67541833_67541994_67555824_67555888_67557268_67557419_67559607_67559692_67561953_67562036_67562136_67562895_67569137_67569217_67569920_67570013_67571751_67571903_67572134_67572278_67573275_67573387_67573800_67573888_67574241_67574404_67575391_67575473_67575822_67576006_67576394_67576504_67577301_67577415_67578022_67578200_67578533_67578632_67579133_67579312_67579720_67579877_67580937_67581039_67582068_67582211_67583740_67583884_67583994_67584125_67585567_67585655_67585950_67586098_67587073
transcript_52496.known	chr14	-	594	4	FSM	ENSG00000100564.9	ENST00000558001.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	37.3838943337309	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGATCCTGGCACAC	2	True	NA	NA	False	NA	NA	NA	67600282	67590126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67590173_67592634_67592719_67593742_67593948_67600023
transcript_52498.known	chr14	-	4190	3	FSM	ENSG00000198133.9	ENST00000357461.7	4190	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGCTCTGGCCCATCT	37	False	NA	-2	True	CATAAA	-23	NA	67515429	67470268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67473942_67486999_67487173_67515085
transcript_52499.known	chr14	-	3950	3	FSM	ENSG00000198133.9	ENST00000554278.6	3950	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGCTCTGGCCCATCT	NA	False	NA	-2	True	CATAAA	-23	NA	67533739	67470268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67473942_67486999_67487173_67533635
transcript_52501.known	chr14	+	1911	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	70.7398222289227	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	0	True	NA	10	True	AATAAA	-17	NA	67619919	67651708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
transcript_52507.known	chr14	-	1103	7	FSM	ENSG00000100568.11	ENST00000216456.6	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	508.888794881117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTGGGAGGAGGGA	7	True	NA	-125	True	NA	NA	NA	67674610	67651263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67663028_67663191_67674374
transcript_52511.known	chr14	-	2539	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	342.077679612232	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACACTGTTCATTA	-2	True	NA	58	True	AATAAA	-34	NA	67695764	67676799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_52512.known	chr14	-	1926	7	FSM	ENSG00000072042.13	ENST00000553384.5	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	208.871105921544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAACAAACAAACAA	8	True	NA	NA	False	NA	NA	NA	67695754	67677363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692972_67693053_67695629
transcript_52516.known	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_4	76.8156234108661	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-15	True	NA	-13	True	AGTAAA	-19	NA	67674632	67647084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
transcript_52523.known	chr14	-	1064	6	FSM	ENSG00000072042.13	ENST00000428130.6	1064	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	442.585765699712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTACTACCTAGGAGAAT	-2	True	NA	NA	False	NA	NA	NA	67695733	67678033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67678424_67685014_67685205_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_52530.known	chr14	-	801	2	FSM	ENSG00000072042.13	ENST00000556692.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGGGTCTTGAGGT	NA	False	NA	NA	False	NA	NA	NA	67695793	67692415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67693053_67695629
transcript_52532.known	chr14	+	922	7	FSM	ENSG00000182185.19	ENST00000390683.7	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	5.61990510002912	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTACAGTCTAATTGC	-5	True	NA	NA	False	AATAAA	-35	NA	67819811	67887326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020
transcript_52538.known	chr14	-	3026	3	FSM	ENSG00000185650.10	ENST00000336440.3	3026	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	701.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTAAGGGG	1603	False	NA	8	True	TTTAAA	-36	NA	68794736	68788604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68788810_68789526_68790493_68792881
transcript_52543.known	chr14	-	3017	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-3	True	NA	-12	True	AATAAA	-19	NA	68793067	68787661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68790493_68792881
transcript_52545.known	chr14	-	727	2	FSM	ENSG00000185650.10	ENST00000557086.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGCTGGGTTTCCCA	-4	True	NA	NA	False	NA	NA	NA	68796253	68789944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68790493_68796074
transcript_52546.known	chr14	-	3722	22	FSM	ENSG00000072110.16	ENST00000394419.9	3722	22	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_3	379.12721107416	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGCTCTTTGCCTGCTC	-9	True	NA	-9	True	ATTAAA	-16	NA	68979302	68874127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_52557.known	chr14	-	3778	22	FSM	ENSG00000072110.16	ENST00000683267.1	3778	22	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_14	380.865740147549	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	7302	False	NA	-14	True	ATTAAA	-11	NA	68979344	68874132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68900861_68900947_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_5256.known	chr1	+	4020	11	FSM	ENSG00000158008.10	ENST00000374280.4	4020	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44131112314674	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTACAGCAGCTGCTC	-2	True	NA	NA	False	AATAAA	-38	NA	26021774	26036464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26023426_26029192_26029287_26029599_26029708_26030475_26030596_26031131_26031265_26031459_26031567_26032395_26032486_26033228_26033316_26033695_26033857_26034835_26035005_26035164
transcript_52561.known	chr14	-	3043	21	FSM	ENSG00000072110.16	ENST00000438964.6	3043	21	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	378.023342533236	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAAGAAAAAAAAG	-3	True	NA	-118	True	NA	NA	NA	68979262	68874685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_52565.known	chr14	-	3779	21	FSM	ENSG00000072110.16	ENST00000193403.10	3779	21	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_10	105.403273193957	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACACTCCTATGACA	2	True	NA	-24	True	ATTAAA	-1	NA	68979440	68874142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_52589.known	chr14	-	4224	21	FSM	ENSG00000072110.16	ENST00000684146.1	4224	21	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	283.18419359138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	7302	False	NA	-14	True	ATTAAA	-11	NA	68979344	68874132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878457_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_5261.known	chr1	-	3249	8	FSM	ENSG00000158014.15	ENST00000374276.4	3249	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.39970842444753	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	26046118	26037251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26039306_26039776_26039912_26041699_26041806_26042548_26042709_26043397_26043552_26044297_26044445_26044996_26045218_26045846
transcript_52611.known	chr14	-	5441	20	FSM	ENSG00000072110.16	ENST00000682378.1	5441	20	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_9	107.512004096895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	7302	False	NA	-14	True	ATTAAA	-11	NA	68979344	68874132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_52619.nic	chr14	-	3409	20	NIC	ENSG00000072110.16	novel	3675	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_2	281.832831927642	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTTTTTAAGGAAGAGA	-2	True	NA	-21	True	ATTAAA	-18	NA	68979326	68874317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_68875018_68877081_68877241_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_52621.known	chr14	-	4895	20	FSM	ENSG00000072110.16	ENST00000684340.1	4895	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	290.954309080136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	7302	False	NA	-14	True	ATTAAA	-11	NA	68979344	68874132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_5263.known	chr1	+	638	3	FSM	ENSG00000142684.9	ENST00000374266.7	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_2	10	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	-21	True	NA	35	True	AATAAA	-19	NA	26169907	26170873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26170184_26170417_26170481_26170574
transcript_52633.nic	chr14	-	3043	20	NIC	ENSG00000072110.16	novel	3043	21	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_2	281.832831927642	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAAGAAAAAAAAG	-4	True	NA	-118	True	NA	NA	NA	68979328	68874685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_68875018_68877081_68877241_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_5264.known	chr1	+	698	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	13	True	NA	35	True	AATAAA	-19	NA	26169941	26170873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26170184_26170417
transcript_52665.known	chr14	-	2245	8	FSM	ENSG00000072110.16	ENST00000683261.1	2245	8	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_4	51.6190915480396	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGACTCTGTCTCAAAA	7302	False	NA	NA	False	NA	NA	NA	68979344	68901281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_52675.known	chr14	-	4803	9	FSM	ENSG00000139990.18	ENST00000554215.5	4803	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	70.9197389659607	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATCACTCAGTGTGTGTTT	-11	True	NA	-11	True	ATTAAA	-37	NA	69152599	69051854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152413
transcript_52676.known	chr14	-	2883	9	FSM	ENSG00000139990.18	ENST00000557386.5	2883	9	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_6	66.0018939122204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGCCTTACAAAAAAAAAA	-1	True	NA	-85	True	ATTAAA	-40	NA	69153003	69053824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118276_69119193_69119231_69122216_69122361_69152764
transcript_5268.known	chr1	+	2507	21	FSM	ENSG00000142675.18	ENST00000482227.5	2507	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	26.9285629026133	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTCTACATGTAACTT	3	True	NA	24	True	AATAAA	-16	NA	26177511	26189882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182484_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_52686.known	chr14	-	2791	9	FSM	ENSG00000139990.18	ENST00000556847.5	2791	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_8	69.6688596146083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAGTGAATACAGAGG	1077	False	NA	-62	True	AAAAAG	-32	NA	69152609	69053801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152488
transcript_52693.known	chr14	+	5708	16	FSM	ENSG00000100626.17	ENST00000337827.8	5708	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	5.98293870564922	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCAAACACTTTGCTAG	9	True	NA	NA	False	AATAAA	-21	NA	69259963	69357033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69260468_69320710_69320869_69324691_69324791_69325336_69325405_69325961_69326028_69328449_69328572_69331463_69331552_69333084_69333170_69333496_69333601_69338650_69338778_69339526_69339620_69341680_69341765_69347039_69347182_69347876_69348003_69352030_69352171_69353331
transcript_52695.known	chr14	+	4108	15	FSM	ENSG00000100626.17	ENST00000448469.8	4108	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	5.43467701760779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCACCAGCGCCTTCC	-16	True	NA	7	True	AATAAA	-18	NA	69260157	69354466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69260468_69320710_69320869_69324691_69324791_69325336_69325405_69325961_69326028_69328449_69328572_69331463_69331552_69333084_69333170_69333496_69333601_69338650_69338778_69339526_69339620_69341680_69341765_69347039_69347182_69347876_69348003_69352030
transcript_52699.nic	chr14	+	3364	10	FSM	ENSG00000081177.19	ENST00000685843.1	5009	10	-15	1660	-15	0	multi-exon	FALSE	canonical	3	100	junction_1	27.6409965695527	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	-33	True	NA	29	True	AATAAA	-18	NA	69191482	69242358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_52704.known	chr14	+	2688	10	FSM	ENSG00000081177.19	ENST00000409949.5	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	43.143458654718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAGAAAAAGTTCTTCC	-39	True	NA	NA	False	GGGGCT	-25	NA	69191765	69241517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69192040_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_52709.known	chr14	+	3252	9	FSM	ENSG00000081177.19	ENST00000409018.7	3252	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	54.3264150759094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	-5	True	NA	29	True	AATAAA	-18	NA	69191510	69242358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69191592_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_52710.known	chr14	+	2496	9	FSM	ENSG00000081177.19	ENST00000409242.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	54.0069439979712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCTTGTCTAGTGC	1	True	NA	NA	False	NA	NA	NA	69191805	69241449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_52714.known	chr14	+	5399	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	27.5887456925626	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	-5	True	NA	26	True	ATTAAA	-23	NA	69398691	69462390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_52715.known	chr14	+	5192	6	FSM	ENSG00000029364.12	ENST00000031146.8	5192	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	55.4003610096541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	-5	True	NA	17	True	ATTAAA	-14	NA	69398691	69462381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_52722.known	chr14	-	791	4	FSM	ENSG00000100632.11	ENST00000557016.6	791	4	0	0	0	0	multi-exon	FALSE	canonical	3	2536	junction_1	175.523977469366	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCCTGAGTGCTTTT	8	True	NA	-12	True	AATAAA	-20	NA	69398299	69380127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69380641_69386962_69387084_69394824_69394913_69398230
transcript_52723.known	chr14	-	668	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	1264.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATATTTTCTCCCTGAG	36	False	NA	-19	True	AATAAA	-13	NA	69398271	69380134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69380641_69386962_69387084_69398230
transcript_52724.known	chr14	+	1763	3	FSM	ENSG00000029364.12	ENST00000554059.1	1763	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	65.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCACTATTAATGTAC	11	True	NA	NA	False	NA	NA	NA	69398707	69429457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69428561
transcript_52725.known	chr14	+	4891	13	FSM	ENSG00000175985.10	ENST00000322564.9	4891	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	1.95078331845327	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTATGTGGTGTGGTC	-1	True	NA	NA	False	ATTAAA	-21	NA	69484727	69531551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69485115_69500114_69500209_69500576_69500667_69500870_69500948_69501733_69501826_69502826_69502880_69522282_69522378_69524228_69524323_69525943_69526123_69526696_69526830_69527187_69527333_69527782_69527933_69528249
transcript_52729.known	chr14	+	5390	6	FSM	ENSG00000100647.8	ENST00000342745.5	5390	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.89897948556636	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGAGATGTGATCCTT	0	True	NA	17	True	ATTAAA	-22	NA	69611595	69715144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69611829_69658512_69658714_69703394_69703593_69704603_69704743_69708676_69709105_69710953
transcript_5273.known	chr1	+	2538	21	FSM	ENSG00000142675.18	ENST00000374253.9	2538	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	24.9809427364141	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	0	True	NA	26	True	AATAAA	-18	NA	26177508	26189884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183436_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_52732.known	chr14	+	1638	8	FSM	ENSG00000100650.16	ENST00000394366.6	1638	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	570.540023457905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATTGATAATAAAAT	NA	False	NA	11	True	NA	NA	NA	69767092	69771973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_52739.known	chr14	+	1496	8	FSM	ENSG00000100650.16	ENST00000557154.6	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	220.771190075487	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	13	True	NA	14	True	AATAAA	-15	NA	69767141	69772005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_52743.known	chr14	-	929	6	FSM	ENSG00000258644.6	ENST00000621525.4	929	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	1275.17568985611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-28	True	NA	-25	True	AATAAA	-28	NA	70417074	70326063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70375675_70375772_70388469_70388607_70416899
transcript_52745.known	chr14	-	479	5	FSM	ENSG00000258644.6	ENST00000617124.4	479	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1101.30635497122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTAAGACAACTTGAC	-3	True	NA	-48	True	AAGAAA	-13	NA	70416984	70326351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70326450_70329173_70329237_70375675_70375772_70388469_70388607_70416899
transcript_52751.known	chr14	-	1669	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2511	junction_3	101.299336402345	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGTGATAATTTGTG	-16	True	NA	-12	True	AATAAA	-17	NA	70359683	70325080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
transcript_52757.known	chr14	-	7057	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	26.1916017074176	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-44	True	NA	-1	True	AATAAA	-21	NA	70417090	70366498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
transcript_52761.known	chr14	-	627	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1198.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	28	False	70359728	-29	True	AATAAA	-24	NA	70359700	70326067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70326450_70329173_70329237_70359518
transcript_52764.known	chr14	-	902	3	FSM	ENSG00000213463.5	ENST00000554216.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	76	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACACATACGTATGCA	-15	True	NA	-73	True	AATACA	-1	NA	70417061	70372487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70373132_70375675_70375772_70416899
transcript_52771.known	chr14	-	2351	8	FSM	ENSG00000133997.12	ENST00000256379.10	2351	8	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	23.5787867303106	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAGAATTCCTATATA	8	True	NA	NA	False	NA	NA	NA	70600655	70583220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_52772.known	chr14	-	862	5	FSM	ENSG00000133997.12	ENST00000556495.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	70600664	70592510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_52773.known	chr14	-	1093	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	6.54896090146283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGATCACCTGAGC	8	True	NA	NA	False	NA	NA	NA	70600655	70592577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
transcript_52775.known	chr14	-	689	3	FSM	ENSG00000133997.12	ENST00000556423.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTTGGTTGCTTGGACA	10	True	NA	NA	False	NA	NA	NA	70600653	70596211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70596703_70597617_70597778_70600615
transcript_52776.known	chr14	-	975	9	FSM	ENSG00000133997.12	ENST00000554963.5	975	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.6273031470386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGATTGTTGTACTTTG	20	True	NA	-6	True	AATAAA	-16	NA	70600643	70581256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70581489_70584816_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_52777.known	chr14	+	5094	3	FSM	ENSG00000133985.3	ENST00000256367.3	5094	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTCTGTTGCCAGC	-13	True	NA	19	True	CATAAA	-20	NA	70641915	70675366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70642536_70667563_70667747_70671075
transcript_52783.known	chr14	-	4025	11	FSM	ENSG00000006432.16	ENST00000381250.8	4025	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	13.2875881934985	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCGCTGTCCCCCAACA	10	True	NA	NA	False	NA	NA	NA	70809506	70729935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70730865_70732538_70733343_70734385_70734499_70738244_70738399_70740041_70740165_70742350_70742592_70748828_70749005_70749932_70750082_70761001_70761183_70800666_70801081_70808765
transcript_52793.known	chr14	+	963	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	49	7	49	-7	multi-exon	FALSE	canonical	3	47	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	24	True	NA	7	True	AATAAA	-17	NA	70809990	70815389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70810675_70815110
transcript_52796.known	chr14	+	368	2	ISM	ENSG00000259153.3	ENST00000554032.2	537	3	305	5	263	-5	3prime_fragment	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	238	False	NA	9	True	AATAAA	-19	NA	70810204	70815391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_70810292_70815110
transcript_52798.known	chr14	+	1659	2	FSM	ENSG00000259153.3	ENST00000661317.1	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAGTATAATGATAA	1090	False	NA	NA	False	AAAACA	-43	NA	70809890	70815994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70810666_70815110
transcript_52800.known	chr14	+	284	2	FSM	ENSG00000275630.1	ENST00000622856.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCGTCTGATGATAGTT	NA	False	NA	8	True	CATAAA	-23	NA	70822003	70823984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70822123_70823819
transcript_52816.known	chr14	+	7952	24	FSM	ENSG00000197555.10	ENST00000381232.8	7952	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	41.1559806686891	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCGATAGAGAATTACT	23	True	NA	13	True	AATAAA	-18	NA	71320475	71741209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_71320504_71321121_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
transcript_52817.nic	chr14	+	6198	24	NIC	ENSG00000197555.10	novel	7952	24	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	44.3711788471676	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGAATGTCTTTATT	NA	False	NA	19	True	AATAAA	-34	NA	71320418	71739401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_71320504_71321121_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738243_71738326_71739017
transcript_52822.nic	chr14	+	6762	23	NIC	ENSG00000197555.10	novel	7952	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	157	junction_21	35.6557229419401	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGAATGTCTTTATT	23	True	NA	19	True	AATAAA	-34	NA	71320475	71739401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
transcript_5283.nic	chr1	+	2623	20	NIC	ENSG00000142675.18	novel	2535	21	NA	NA	-9	0	intron_retention	TRUE	canonical	3	76	junction_8	15.735873936069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	7501	False	NA	26	True	AATAAA	-18	NA	26177474	26189884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_52831.known	chr14	+	5400	15	FSM	ENSG00000182732.18	ENST00000402788.6	5400	15	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_14	3.55783125868922	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTCTGTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-23	NA	72352091	72566529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_72352195_72454527_72454579_72458270_72458378_72459631_72459684_72465757_72465823_72470006_72470084_72472871_72472954_72474624_72474700_72476741_72476841_72478267_72478330_72495151_72495263_72510153_72510280_72518350_72518538_72536185_72536276_72562416
transcript_52843.nic	chr14	+	2434	14	NIC	ENSG00000119599.17	novel	2374	14	NA	NA	-3	0	intron_retention	FALSE	canonical	2	37	junction_9	13.6689515576869	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	-27	True	NA	27	True	AATAAA	-12	NA	72926447	72959644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_52845.known	chr14	+	2474	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_9	13.3500880922564	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	-11	True	NA	86	True	NA	NA	NA	72926463	72959703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_52848.known	chr14	+	1872	14	FSM	ENSG00000119599.17	ENST00000509320.5	1872	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	26.4302140176305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACGAAAAGCTTCT	-24	True	NA	NA	False	AAAAAG	-24	NA	72926450	72959121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945887_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_52857.known	chr14	+	2374	14	FSM	ENSG00000119599.17	ENST00000555042.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.889447891486	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	12	True	NA	27	True	AATAAA	-12	NA	72926486	72959644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954463_72955522_72955697_72956385_72956501_72958611
transcript_52859.known	chr14	-	4380	12	FSM	ENSG00000165861.14	ENST00000556143.6	4380	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	10.720336740733	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGACTGTGCTGGCTCTT	-11	True	NA	-7	True	CATAAA	-15	NA	73027106	72969450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978045_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
transcript_52864.known	chr14	+	6813	19	FSM	ENSG00000119707.14	ENST00000261973.12	6813	19	0	0	0	0	multi-exon	TRUE	canonical	3	240	junction_9	112.33184964401	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTGTCTACTTT	-3	True	NA	NA	False	AATAAA	-38	NA	73058533	73123899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
transcript_52870.nic	chr14	+	1728	11	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-251	17905	-249	4815	5prime_fragment	FALSE	canonical	3	240	junction_9	56.8031689256858	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGACCGAGAAGAAGATGA	NA	False	NA	-36	True	AAAAAG	-9	NA	73058282	73105994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858
transcript_52875.nic	chr14	+	1956	10	ISM	ENSG00000119707.14	ENST00000526754.5	1567	11	-38	0	-21	0	intron_retention	FALSE	canonical	3	54	junction_9	108.343190434749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	0	True	NA	NA	False	AATAAA	-20	NA	73058510	73101179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300
transcript_52876.nic	chr14	+	1114	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-23	20671	-21	2049	5prime_fragment	FALSE	canonical	3	240	junction_9	54.590959320259	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGGAAATTGAGAAAGAA	0	True	NA	6	True	AAAAAG	-11	NA	73058510	73103228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_52877.nic	chr14	+	1220	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-23	20565	-21	2155	5prime_fragment	FALSE	canonical	3	240	junction_9	54.590959320259	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAGAACGGGAGCGGG	0	True	NA	44	True	NA	NA	NA	73058510	73103334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_52882.known	chr14	+	2470	9	FSM	ENSG00000119707.14	ENST00000525321.5	2470	9	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_6	31.6936014835802	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	10	True	NA	NA	False	AATAAA	-20	NA	73058546	73101179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666
transcript_52886.known	chr14	+	1039	8	FSM	ENSG00000119707.14	ENST00000531500.5	1039	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	163.693965330779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTTCTGACAACAAC	-4	True	NA	31	True	NA	NA	NA	73058532	73097100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73058706_73064971_73065094_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914
transcript_52887.nic	chr14	+	921	7	ISM	ENSG00000119707.14	ENST00000525321.5	2470	9	-18	4079	-3	0	5prime_fragment	FALSE	canonical	3	322	junction_6	32.2511843021135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTTCTGACAACAAC	-8	True	NA	31	True	NA	NA	NA	73058528	73097100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914
transcript_52896.known	chr14	+	2776	12	FSM	ENSG00000080815.19	ENST00000357710.8	2776	12	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	44.3321423233212	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	-43	True	NA	14	True	ATTAAA	-25	NA	73136446	73220401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_52897.known	chr14	+	6018	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	64.0374373974299	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	17	True	NA	7	True	AATAAA	-16	NA	73136506	73223691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_52903.known	chr14	+	5889	27	FSM	ENSG00000100767.17	ENST00000644200.2	5889	27	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13.3912450424515	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAGTTTAATTAAACCA	-26	True	NA	17	True	AATAAA	-17	NA	73237505	73274623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73237593_73239772_73239833_73244643_73244760_73245635_73245697_73246072_73246176_73249983_73250115_73250906_73251031_73251485_73251567_73251663_73251837_73252017_73252142_73252648_73252776_73253753_73253962_73254512_73254696_73254876_73255019_73258978_73259060_73259268_73259546_73260708_73260830_73261155_73261295_73262349_73262828_73263644_73263783_73264210_73264336_73264587_73264727_73265369_73265508_73266500_73266629_73266722_73266832_73268556_73268724_73272494
transcript_52907.known	chr14	-	3050	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCAAGTTTCTATTT	16	True	NA	NA	False	AATGAA	-18	NA	73245979	73242650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73245245_73245523
transcript_52911.known	chr14	-	3604	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	50.7772915123811	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	7	True	NA	-27	True	AATAAA	-15	NA	73458546	73275215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_52918.known	chr14	-	3547	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_7	64.5832155868473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	31	True	NA	-27	True	AATAAA	-15	NA	73458522	73275215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_52920.nic	chr14	-	3582	12	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_10	61.0979433179706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	8859	False	NA	-27	True	AATAAA	-15	NA	73458609	73275215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_52923.known	chr14	-	3037	12	FSM	ENSG00000133961.21	ENST00000555394.5	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	62.7570416845133	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAATTCTAATGTCAT	-27	True	NA	-2	True	AATAAA	-33	NA	73458580	73275672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_52935.known	chr14	-	3607	11	FSM	ENSG00000133961.21	ENST00000554546.5	3607	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	76.1167524267818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	8851	False	NA	82	True	NA	NA	NA	73458617	73275106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_52962.known	chr14	-	1740	7	FSM	ENSG00000133961.21	ENST00000554315.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	88.5012554838756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	7	True	NA	NA	False	NA	NA	NA	73458546	73286192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_52967.known	chr14	-	847	5	FSM	ENSG00000133961.21	ENST00000557774.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	52.3975190252363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGGTATAAATTATTAG	-24	True	NA	NA	False	AATAAA	-41	NA	73458577	73322800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_52970.known	chr14	-	557	6	FSM	ENSG00000133961.21	ENST00000555987.5	557	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.629646045635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCACCACTCGTCGCTGG	-24	True	NA	NA	False	NA	NA	NA	73458577	73292786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73292826_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_52973.nnic	chr14	+	2980	4	Genic_Genomic	ENSG00000170468.8	novel	2462	1	NA	NA	0	11859	multi-exon	FALSE	canonical	1	2	junction_3	3.09120616516523	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCTCTCTCTCTGAAA	-32	True	NA	1	True	AATAAA	-13	NA	73490932	73505253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr14_+_73493324_73494152_73494330_73500570_73500682_73504952
transcript_52977.known	chr14	+	1686	3	FSM	ENSG00000184227.8	ENST00000311148.9	1686	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	0	True	NA	4	True	ATTAAA	-17	NA	73537142	73543796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73537879_73541492_73541696_73543049
transcript_52978.known	chr14	+	1578	4	FSM	ENSG00000119673.16	ENST00000538782.2	1578	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.5371856499935	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGAGTTTTTAAGATT	-4	True	NA	12	True	ATTAAA	-15	NA	73567619	73575653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73568130_73569277_73569397_73573387_73573591_73574907
transcript_52979.known	chr14	+	1465	3	FSM	ENSG00000177465.5	ENST00000326303.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTATTTTACGTAACTT	34	False	NA	7	True	ATTAAA	-20	NA	73591872	73595766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73592417_73593701_73593905_73595048
transcript_52981.known	chr14	-	629	2	FSM	ENSG00000258603.5	ENST00000555011.3	1303	2	658	16	-56	-16	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGACAGTCTCAC	664	False	NA	NA	False	ATTAAA	-8	NA	73633778	73616699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73617211_73633660
transcript_52982.known	chr14	+	2462	1	FSM	ENSG00000170468.8	ENST00000304061.8	2462	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTCCTAAGGCTAGAT	-32	True	NA	22	True	ATTAAA	-16	NA	73490932	73493394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73490900_73493400
transcript_52983.known	chr14	+	632	9	FSM	ENSG00000119661.15	ENST00000554871.5	632	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	29.372606285449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACGCTTTCCACTGTGT	29	True	NA	-64	True	ATTAAA	-25	NA	73645026	73695942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_52984.known	chr14	+	8417	8	FSM	ENSG00000119661.15	ENST00000553645.7	8417	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	11.0675108275695	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-12	True	NA	8	True	AATAAA	-22	NA	73644985	73703732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_52987.known	chr14	+	2312	7	FSM	ENSG00000119661.15	ENST00000311089.7	2312	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	28.7426319060884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGAAAACTTGGTC	11	True	NA	NA	False	AATAGA	-34	NA	73645008	73697760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73645043_73654846_73654886_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_52990.known	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-3	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73711800_73714400
transcript_52991.known	chr14	-	3839	12	FSM	ENSG00000156030.14	ENST00000286523.9	8091	12	0	4252	0	-1	multi-exon	FALSE	canonical	3	4	junction_11	5.06486846443059	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAGAAGAAGAAAAAAACAG	-11	True	NA	0	True	NA	NA	NA	73760298	73719382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73719502_73721296_73721510_73722697_73722848_73725271_73725361_73726032_73726109_73726603_73726708_73726829_73726973_73727457_73727525_73729639_73729986_73736997_73737298_73738559_73740256_73759762
transcript_52992.known	chr14	-	7721	12	FSM	ENSG00000156030.14	ENST00000394071.6	7721	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	4.5924839782964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGAATGCTTTGTTCTC	-5	True	NA	-1	True	ATTAAA	-19	NA	73787258	73715121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73719502_73721296_73721510_73722697_73722848_73725271_73725361_73726032_73726109_73726603_73726708_73726829_73726973_73727457_73727525_73729639_73729986_73736997_73737298_73738559_73740256_73787101
transcript_53.known	ERCC-00150	+	727	1	FSM	ERCC-00150A	DQ883659	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00150_+_0_700
transcript_53001.known	chr14	-	5261	16	FSM	ENSG00000187097.13	ENST00000334696.11	5261	16	0	0	0	0	multi-exon	TRUE	canonical	1	19	junction_4	7.64954610127657	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGTCTTCCTTCGAAG	-3	True	NA	0	True	AATAAA	-19	NA	74019288	73963229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73967015_73970009_73970126_73971851_73971909_73972883_73973025_73973876_73973979_73974923_73974986_73975935_73976016_73976323_73976413_73977023_73977060_73977298_73977375_73983017_73983162_73986813_73986894_73987885_73988173_74011090_74011151_74015823_74015931_74019249
transcript_53019.known	chr14	+	2623	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_10	28.7813070648926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATAGTTTTTTTAAAA	11	True	NA	NA	False	AATAAA	-25	NA	73886858	73932521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_53025.known	chr14	+	1961	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	52.0590891231356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	49	False	NA	NA	False	NA	NA	NA	73886807	73931840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_53028.known	chr14	+	2109	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	6.68042657122685	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTTTGGTGGCAGA	-11	True	NA	NA	False	NA	NA	NA	73950301	73963670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_53029.known	chr14	-	5462	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_3	25.2805743213347	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTGTATTTTA	21	False	74084474	NA	False	AATGAA	-27	NA	74084453	74056846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_53031.known	chr14	-	2221	12	FSM	ENSG00000119711.13	ENST00000554501.5	2221	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	78.4394275964128	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGATTGCTTGAGCCCA	-19	True	NA	-67	True	NA	NA	NA	74084449	74060246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071661_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_53036.known	chr14	+	2293	11	FSM	ENSG00000119725.21	ENST00000324593.10	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	36.3236837338946	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	46	False	NA	13	True	AATAAA	-17	NA	73886804	73932278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_53042.known	chr14	+	1722	11	FSM	ENSG00000119725.21	ENST00000540593.5	1722	11	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	51.3073094207833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACAGGATGCCTTAGCC	195	False	NA	NA	False	NA	NA	NA	73886616	73931597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_53056.known	chr14	+	2765	10	FSM	ENSG00000140043.12	ENST00000555661.6	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	21.1945718650604	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCATCTTATACTCTGC	-4	True	NA	NA	False	AGTAAA	-15	NA	73851830	73885726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_53060.known	chr14	+	2167	10	FSM	ENSG00000119725.21	ENST00000555730.6	2167	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	62.83311228962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCCCAGTCAGTTCT	312	False	NA	-2	True	AATAAA	-2	NA	73886733	73932263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_5307.known	chr1	+	624	3	FSM	ENSG00000142675.18	ENST00000465415.1	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCCAACATGGTGAA	-6	True	NA	NA	False	NA	NA	NA	26177502	26181083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26177600_26180452_26180611_26180714
transcript_53076.known	chr14	+	649	5	FSM	ENSG00000119723.17	ENST00000554920.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	38.4341970125564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTCTTCTTTGCT	-5	True	NA	11	True	AATAAA	-18	NA	73950307	73963112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73962969
transcript_53077.known	chr14	+	1798	6	FSM	ENSG00000205659.12	ENST00000555028.7	2874	6	-3	1079	-3	-24	multi-exon	FALSE	canonical	3	142	junction_1	26.0076911701135	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-10	True	NA	NA	False	NA	NA	NA	74084952	74200414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921
transcript_53079.known	chr14	+	585	6	FSM	ENSG00000205659.12	ENST00000554076.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	73.6711612505192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAGGAAAGATACACAC	0	True	NA	NA	False	ATTAAA	-22	NA	74084962	74114295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74114005
transcript_5308.known	chr1	+	1078	4	FSM	ENSG00000236155.7	ENST00000451482.2	1083	4	5	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	14.8996644257513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	1	True	NA	NA	False	AATAAA	-44	NA	26225319	26229840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26225704_26227403_26227556_26227793_26227997_26229501
transcript_53080.known	chr14	+	3018	5	FSM	ENSG00000119614.3	ENST00000261980.3	3018	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGGAGAAATCCAGGAG	-1	True	NA	NA	False	AATAAA	-16	NA	74239448	74262738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74239932_74241181_74241267_74245164_74245289_74259601_74259783_74260593
transcript_5309.nnic	chr1	+	740	3	FSM	ENSG00000236155.7	ENST00000692018.1	935	3	191	4	186	0	multi-exon	FALSE	canonical	3	35	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	157	False	NA	NA	False	AATAAA	-44	NA	26225505	26229840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26225704_26227793_26227997_26229501
transcript_53105.known	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_17	92.5881795244637	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	1	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
transcript_5313.known	chr1	+	3935	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	51.6422605713874	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	-8	True	NA	17	True	AATAAA	-15	NA	26234201	26278808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
transcript_53131.nic	chr14	-	2228	18	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	107.45717743687	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	3	True	NA	-31	True	ATTAAA	-3	NA	74302973	74285995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
transcript_53133.known	chr14	-	1842	18	FSM	ENSG00000119688.21	ENST00000553486.5	1842	18	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_16	87.8602224281336	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACATGGGTCCTGTGCAG	122	False	NA	NA	False	NA	NA	NA	74302945	74286344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_53184.nnic	chr14	-	2136	17	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	101.938400517175	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	58	False	NA	-31	True	ATTAAA	-3	NA	74303009	74285995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74302874
transcript_5319.known	chr1	+	2663	13	FSM	ENSG00000130695.16	ENST00000640292.2	2663	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	83.18052656722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAAGGCTGAGCAAGT	-10	True	NA	NA	False	NA	NA	NA	26234199	26277687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26234311_26239761_26239839_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
transcript_5323.nic	chr1	+	2308	10	ISM	ENSG00000130695.16	ENST00000252992.8	3935	14	0	7267	0	-852	5prime_fragment	FALSE	canonical	3	229	junction_9	26.6268220845257	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACCCATAAATGATTCA	-8	True	NA	NA	False	AGTAAA	-8	NA	26234201	26271541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013
transcript_53238.known	chr14	-	2336	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_15	90.2205630662988	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTAAACATTAAAAAGA	-2	True	NA	25	True	NA	NA	NA	74302937	74286013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_5328.known	chr1	-	1792	16	FSM	ENSG00000158062.21	ENST00000374221.7	1792	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	63.9279455498315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	-9	True	NA	NA	False	AATAAA	-15	NA	26306645	26282283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26303042_26303168_26306591
transcript_53309.known	chr14	-	1770	16	FSM	ENSG00000119688.21	ENST00000553745.5	1770	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	135.700094161926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCAGCCTGATCTCCAT	7	True	NA	NA	False	NA	NA	NA	74302969	74286569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
transcript_5331.known	chr1	-	2043	16	NIC	ENSG00000158062.21	novel	1944	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	60.7425898544195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	26318363	26282283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591_26306705_26318046
transcript_5334.nic	chr1	-	1705	15	NIC	ENSG00000158062.21	novel	1660	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	55.25068103745	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-16	True	NA	NA	False	AATAAA	-17	NA	26306652	26282281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301054_26301693_26301723_26302812_26302919_26306591
transcript_53412.known	chr14	-	1003	9	FSM	ENSG00000119688.21	ENST00000460308.6	1003	9	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	105.38619454179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCCTGGGCGAGAGCGA	12	False	NA	NA	False	NA	NA	NA	74303055	74292321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74292377_74292550_74292643_74292747_74292870_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_53488.known	chr14	+	3408	2	FSM	ENSG00000133980.5	ENST00000256362.5	3408	2	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_1	0	1167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCTGGTATTT	0	True	NA	37	True	AATAAA	-18	NA	74348470	74360008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74348653_74356782
transcript_5349.known	chr1	-	1555	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	46.1838364101785	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	4	True	NA	NA	False	AATAAA	-15	NA	26306632	26282283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_53491.known	chr14	-	2709	4	FSM	ENSG00000183379.9	ENST00000331628.8	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTCTAGGTATC	-4	True	NA	-12	True	AATAAA	-14	NA	74426210	74405898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74407694_74407848_74407990_74409327_74409802_74425911
transcript_53494.known	chr14	+	2581	4	FSM	ENSG00000165898.14	ENST00000556816.6	2581	4	0	0	0	0	multi-exon	FALSE	canonical	1	327	junction_3	262.024595961694	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	74493764	74497106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74493846_74494049_74494153_74494274_74494391_74494825
transcript_53496.known	chr14	+	925	3	FSM	ENSG00000165898.14	ENST00000555139.1	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	57	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCACCAGTTGTACCAA	12	True	NA	-31	True	NA	NA	NA	74493771	74495022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74493846_74494049_74494153_74494274
transcript_53500.known	chr14	+	851	4	FSM	ENSG00000165898.14	ENST00000298818.12	851	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	414.627811684434	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTTATTGTGTTGTGGA	-4	True	NA	15	True	TATAAA	-18	NA	74493755	74495366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74493846_74494049_74494153_74494274_74494405_74494838
transcript_53501.known	chr14	-	729	5	FSM	ENSG00000119655.11	ENST00000553490.5	729	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1112.52977488245	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAGGTGGTTTCATT	-2	True	NA	-69	True	NA	NA	NA	74493339	74480081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74480289_74480685_74480780_74484414_74484588_74486328_74486437_74493192
transcript_53502.known	chr14	-	583	4	FSM	ENSG00000119655.11	ENST00000554482.1	583	4	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	1138.84239471491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGCTGTGGTCTTCT	5522	False	NA	-10	True	AATAAA	-27	NA	74493242	74479941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74480289_74480701_74480780_74486328_74486437_74493192
transcript_53503.known	chr14	-	5505	21	FSM	ENSG00000119682.18	ENST00000681599.1	5505	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	22.0938905582516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAGAACTAAGGAGT	5	True	NA	-19	True	AATAAA	-2	NA	74713087	74661266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74691058_74691151_74692040_74692329_74712932
transcript_53505.known	chr14	-	5417	20	FSM	ENSG00000119682.18	ENST00000356357.9	5417	20	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_17	7.49182379816255	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGAGTGAGTGGCTGCT	12	True	NA	-8	True	AATAAA	-13	NA	74713080	74661255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_53506.known	chr14	-	2639	19	FSM	ENSG00000119682.18	ENST00000556202.5	2639	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_16	16.1054587785985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCCTCCCTACATATG	5	True	NA	NA	False	NA	NA	NA	74713087	74663813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74685599_74685661_74692040_74692329_74712932
transcript_53510.known	chr14	+	4899	20	FSM	ENSG00000119596.18	ENST00000552421.5	4899	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	65.16214593733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCCTTTTCTCTTGTTT	3	True	NA	37	True	AATAAA	-42	NA	74763365	74836190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
transcript_53511.known	chr14	+	8195	21	FSM	ENSG00000119596.18	ENST00000325680.12	8195	21	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	41.8775297743313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTATTTTCATTGCTTA	-47	True	NA	NA	False	ATTAAA	-27	NA	74763315	74837318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74797579_74799698_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
transcript_53513.known	chr14	+	2813	15	FSM	ENSG00000119689.15	ENST00000334220.9	2813	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	3.99297853124962	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	-10	True	NA	8	True	ATTAAA	-18	NA	74881915	74903743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288_74900373_74901065_74901234_74902195
transcript_5352.known	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_11	55.8762368646444	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-4	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_53525.known	chr14	-	5322	12	FSM	ENSG00000198208.12	ENST00000557413.6	5322	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.81490098292902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGACTCTTTTTGGCA	-16	True	NA	NA	False	AATAAA	-21	NA	74923260	74903950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74909191_74909542_74910149_74911247_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
transcript_53526.known	chr14	-	3309	12	FSM	ENSG00000198208.12	ENST00000555647.5	3309	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.75230424138465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTCTCGCTTCTTCCA	-12	True	NA	-5	True	AATAAA	-16	NA	74923302	74905642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74909191_74909542_74910149_74911247_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74922340_74922486_74923179
transcript_53530.nic	chr14	-	3582	11	NIC	ENSG00000198208.12	novel	5322	12	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_3	8.50881895447306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTCTCGCTTCTTCCA	-15	True	NA	-5	True	AATAAA	-16	NA	74923305	74905642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74909191_74909542_74910149_74911247_74911381_74911793_74911842_74919844_74919970_74921276_74921562_74921977_74922486_74923179
transcript_53552.known	chr14	-	1626	7	FSM	ENSG00000198208.12	ENST00000553894.6	1626	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	7.05730511991338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-11	True	NA	NA	False	NA	NA	NA	74923255	74910889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
transcript_53553.nic	chr14	-	2108	6	NIC	ENSG00000198208.12	novel	1626	7	NA	NA	-3	19	intron_retention	FALSE	canonical	2	5	junction_2	7.4565407529229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCCCTGGGGAGGGGC	-15	True	NA	NA	False	NA	NA	NA	74923305	74910870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
transcript_53561.nic	chr14	-	1507	5	ISM	ENSG00000198208.12	ENST00000553894.6	1626	7	5	7198	1	1784	5prime_fragment	FALSE	canonical	2	5	junction_1	7.8541390362025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGCAGACAGGCCCTT	-6	True	NA	NA	False	AATAAA	-37	NA	74923250	74918087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
transcript_53568.nic	chr14	-	844	2	ISM	ENSG00000198208.12	ENST00000553894.6	1626	7	-50	10878	-3	-252	5prime_fragment	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCCTGAGCTGGTTAT	-15	True	NA	NA	False	AAAAAG	-10	NA	74923305	74921767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_74922486_74923179
transcript_53569.known	chr14	-	1693	7	FSM	ENSG00000119630.14	ENST00000238607.10	1693	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	12.8765506078125	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGTATTCTAGTGTG	56	False	NA	-29	True	NA	NA	NA	74955577	74941857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74942734_74946212_74946276_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953944_74955167
transcript_53573.known	chr14	-	1699	6	FSM	ENSG00000119630.14	ENST00000553716.5	1699	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11.5412304370028	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAACGCTGATCTAGTG	7	False	NA	-12	True	AATAAA	-11	NA	74955626	74941840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74942734_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
transcript_53574.known	chr14	+	4304	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_6	21.2900283260133	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	-25	True	NA	NA	False	AATAAA	-16	NA	75002920	75012366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
transcript_53580.known	chr14	-	7820	13	FSM	ENSG00000119684.16	ENST00000355774.7	7820	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	16.1681700331924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCCTTCCATCCCTCT	-12	True	NA	-11	True	AATAAA	-15	NA	75051467	75013774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75033418_75033491_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_53582.known	chr14	-	7819	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	18.252589536649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCATCCCTCTCTTCAT	NA	False	NA	-5	True	AATAAA	-21	NA	75051532	75013768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_53585.known	chr14	-	8278	22	FSM	ENSG00000119638.14	ENST00000238616.10	8278	22	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_10	25.8299866166589	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCTATTTAAATA	-13	True	NA	NA	False	ATTAAA	-16	NA	75127048	75079352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_53586.known	chr14	-	6010	22	FSM	ENSG00000119638.14	ENST00000678531.1	6010	22	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	31.9498615144675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCTCACAGAATGAT	-5	True	NA	-27	True	AATAAA	-11	NA	75127040	75081410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126904
transcript_5359.nic	chr1	-	1516	13	NIC	ENSG00000158062.21	novel	1660	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	50.5409624847894	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-1	True	NA	NA	False	AATAAA	-17	NA	26306697	26282281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
transcript_53591.nic	chr14	-	1577	11	NIC	ENSG00000119638.14	novel	2667	9	NA	NA	-20	757	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.5562619305138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAAGACCTCTTTATTT	7795	False	NA	NA	False	AATAAA	-19	NA	75127073	75107512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_75107756_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_53594.known	chr14	-	4109	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	0	0	0	multi-exon	FALSE	canonical	3	1826	junction_2	132.52735566667	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTGTACTGTTACTC	3	True	NA	-32	True	AATAAA	-16	NA	75176612	75131468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
transcript_53597.known	chr14	-	650	4	FSM	ENSG00000119640.9	ENST00000357971.7	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	136.355743879343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	9	True	NA	-37	True	AATAAA	-16	NA	75064015	75053242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75053660_75061683_75061763_75063469_75063562_75063953
transcript_53598.known	chr14	+	1509	3	FSM	ENSG00000119703.15	ENST00000439583.2	1509	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	-16	True	NA	21	True	ATTAAA	-15	NA	75069640	75078089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75069750_75070554_75071397_75077531
transcript_53599.known	chr14	+	3923	3	FSM	ENSG00000119703.15	ENST00000524913.3	3923	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTTCCCTTTAATCT	-16	True	NA	NA	False	AATAAA	-16	NA	75069640	75079988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75069750_75070554_75071912_75077531
transcript_53601.known	chr14	-	580	3	FSM	ENSG00000119640.9	ENST00000238618.8	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	4	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	0	True	NA	-37	True	AATAAA	-16	NA	75064024	75053242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75053660_75063469_75063562_75063953
transcript_53602.known	chr14	+	4322	2	FSM	ENSG00000119703.15	ENST00000674017.1	4322	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	75068742	75079199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75071397_75077531
transcript_53603.known	chr14	-	789	3	FSM	ENSG00000119640.9	ENST00000555463.1	789	3	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_2	148.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACTTTTAAAAAATCTT	17	True	NA	-31	True	AATAAA	-22	NA	75069483	75053236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75053660_75063469_75063562_75069209
transcript_53604.known	chr14	+	2104	4	FSM	ENSG00000170345.10	ENST00000303562.9	2104	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	5.35412613473634	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTTGTGCTCTTTTCA	0	True	NA	13	True	AATAAA	-21	NA	75278827	75282230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75279124_75279876_75280129_75280559_75280668_75280782
transcript_53606.known	chr14	+	5401	4	FSM	ENSG00000140044.13	ENST00000435893.6	5401	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	60.2162768692984	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGTTTTGTTTTTATT	281	False	NA	NA	False	AATAAA	-23	NA	75428356	75474111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75428607_75437897_75438122_75461425_75461531_75469289
transcript_53613.nic	chr14	+	4693	32	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_26	25.2787168894199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTTCCTCTTCTTT	31	False	NA	21	True	TATAAA	-21	NA	75661019	75954827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792912_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_53614.known	chr14	+	4716	32	FSM	ENSG00000119685.20	ENST00000298832.14	4716	32	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	17.364549387826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	0	True	NA	4	True	AATAAA	-16	NA	75661245	75955079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_53626.known	chr14	+	1595	10	FSM	ENSG00000119685.20	ENST00000286650.9	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	49.7142451701673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32	True	NA	NA	False	NA	NA	NA	75661277	75709828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75709178
transcript_53628.known	chr14	+	3629	10	FSM	ENSG00000119686.10	ENST00000238667.9	3629	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	10.2632028788938	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	4	True	NA	6	True	AATAAA	-14	NA	75578619	75648167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75579642_75622078_75622221_75624611_75624753_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
transcript_53639.known	chr14	-	2320	5	FSM	ENSG00000133935.7	ENST00000256319.7	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_2	76.983764522138	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGGTCAGAAAAGG	-27	True	NA	NA	False	NA	NA	NA	75660876	75649790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
transcript_53642.known	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	151.302085205903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	-17	True	NA	17	True	AATAAA	-17	NA	75985752	76083741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_53644.known	chr14	+	816	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	41.1187305251512	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	-7	True	NA	18	True	AATAAA	-18	NA	75985762	76083742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_53645.nic	chr14	+	1284	9	NIC	ENSG00000119650.13	novel	1008	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	41	junction_1	119.41622324877	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTTCTTTCCAGTCTC	-3	True	NA	22	True	AATAAA	-22	NA	75985766	76083746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_5365.known	chr1	-	2542	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	47.9049985793642	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	0	True	NA	NA	False	AATAAA	-17	NA	26306636	26282281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_53655.known	chr14	+	848	4	FSM	ENSG00000119650.13	ENST00000556742.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	32.2214559295855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	14	True	NA	7	True	AATAAA	-15	NA	75985783	76059271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641
transcript_53656.nic	chr14	+	1333	4	NIC	ENSG00000119650.13	novel	848	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	41	junction_1	175.48472551447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	-3	True	NA	7	True	AATAAA	-15	NA	75985766	76059271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75986309_75988884_75988978_76022326_76022395_76058641
transcript_53657.known	chr14	-	3431	7	FSM	ENSG00000119699.8	ENST00000238682.8	3431	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGACTCGATAAATATC	-1	True	NA	NA	False	AGTAAA	-20	NA	75981995	75958096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75959346_75960922_75961077_75963315_75963488_75965587_75965696_75971125_75971256_75971554_75971719_75980541
transcript_53665.known	chr14	+	2438	10	FSM	ENSG00000089916.18	ENST00000312858.9	2438	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	72.9953490823513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGGCGTGTTTATGAT	4	True	NA	12	True	AGTAAA	-22	NA	76151934	76202788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177891_76177932_76180763_76180850_76195877_76195973_76201690
transcript_53667.nnic	chr14	+	3249	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-11	-2475	intron_retention	FALSE	canonical	3	13	junction_9	54.9080038690981	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGTATTCCTGTTT	-26	True	NA	12	True	ATTAAA	-16	NA	76151904	76199532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76197668
transcript_53668.nnic	chr14	+	1869	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-11	-1644	intron_retention	FALSE	canonical	3	19	junction_9	53.1015798049152	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTAGGGTAGTGCTT	-26	True	NA	6	True	AATAAA	-14	NA	76151904	76200363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
transcript_53669.known	chr14	+	14021	10	FSM	ENSG00000089916.18	ENST00000261530.12	14021	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	36.3440351211707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTCCTCTGCCAT	-9	True	NA	-13	True	NA	NA	NA	76151921	76214343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76201690
transcript_53675.nic	chr14	+	1842	9	ISM	ENSG00000089916.18	ENST00000261530.12	14021	10	-17	17914	-11	-156	5prime_fragment	FALSE	canonical	3	160	junction_1	16.4235920248891	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCAGTTTTTTTTTTTT	-26	True	NA	NA	False	ATTAAA	-21	NA	76151904	76196429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877
transcript_53682.nic	chr14	+	3208	7	ISM	ENSG00000089916.18	ENST00000261530.12	14021	10	-17	34297	-11	24	5prime_fragment	FALSE	canonical	3	160	junction_1	16.7032930884901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGTGTGGTGGTAG	-26	True	NA	NA	False	AATACA	-16	NA	76151904	76180046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987
transcript_53688.known	chr14	+	6248	6	FSM	ENSG00000089916.18	ENST00000554125.5	6248	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	72.6404845798815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATACAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	76151933	76180022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76176691_76177891
transcript_53689.known	chr14	+	1458	5	FSM	ENSG00000089916.18	ENST00000557263.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.9348388796892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	-9	True	NA	NA	False	NA	NA	NA	76151921	76174035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76151976_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_53710.known	chr14	-	5287	10	FSM	ENSG00000013523.11	ENST00000251089.8	5287	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	15.7511512414839	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAGAATTTTCAGAT	-26	True	NA	NA	False	ATTAAA	-18	NA	76812882	76786008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76806415_76806850_76807432_76807503_76807921_76808149_76809058_76809644_76812763
transcript_53724.known	chr14	+	6449	7	FSM	ENSG00000071246.11	ENST00000167106.9	6449	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	5.1207638319124	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTAAGCCTTGTCTCCTT	-31	True	NA	27	True	AATAAA	-43	NA	76761467	76783015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76763131_76769962_76770052_76771189_76771247_76773136_76773212_76775891_76776274_76777958_76778072_76778945
transcript_53726.known	chr14	+	1462	4	FSM	ENSG00000071246.11	ENST00000554237.1	1462	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAACAAGGTTTTCCAGT	561	False	NA	NA	False	ATTAAA	-29	NA	76762328	76773650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76763131_76769962_76770052_76771189_76771247_76773136
transcript_53730.known	chr14	-	1684	2	FSM	ENSG00000258301.3	ENST00000556072.2	1684	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGCTGGTCTCCAC	NA	False	NA	1	True	AATAAA	-18	NA	76786724	76781732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_76782777_76786084
transcript_53732.nnic	chr14	-	4079	2	Genic_Genomic	ENSG00000119669.5	novel	4166	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGCTGAGTCAGCAATTT	-1	True	NA	-7	True	AATAAA	-16	NA	77028708	77024542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr14_-_77027481_77027567
transcript_53733.nnic	chr14	-	3762	2	Genic_Genomic	ENSG00000119669.5	novel	4166	1	NA	NA	-56	-373	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTATAAAATGGTGAAAG	-2	True	NA	NA	False	NA	NA	NA	77028764	77024915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr14_-_77027481_77027567
transcript_53735.known	chr14	-	4166	1	FSM	ENSG00000119669.5	ENST00000238647.5	4166	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGCTGAGTCAGCAATTT	-1	True	NA	-7	True	AATAAA	-16	NA	77028708	77024542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77024500_77028700
transcript_53736.known	chr14	-	424	2	FSM	ENSG00000258819.2	ENST00000555512.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGCAGCTCAGCTAAGG	NA	False	NA	NA	False	NA	NA	NA	77076344	77070662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77070847_77076104
transcript_53739.known	chr14	+	5363	24	FSM	ENSG00000165548.11	ENST00000298351.5	5363	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.18787874431711	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCCCTGCCTCTCTG	-2	True	NA	15	True	AATAAA	-18	NA	77181797	77259495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77181895_77213445_77213509_77218800_77218964_77219497_77219578_77220005_77220088_77225423_77225462_77231587_77231731_77233451_77233501_77236623_77236733_77238693_77238768_77239411_77239493_77239602_77239727_77240474_77240609_77242346_77242470_77242902_77243057_77244348_77244456_77245939_77246027_77246608_77246675_77248346_77248510_77248766_77248873_77249290_77249459_77251788_77251899_77253304_77253377_77256525
transcript_53740.known	chr14	+	599	4	FSM	ENSG00000198894.8	ENST00000555611.5	599	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	77.2571463792617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGAGAAAAAGTCCGAC	-3	True	NA	NA	False	NA	NA	NA	77098281	77113545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113384
transcript_53742.known	chr14	+	4325	4	FSM	ENSG00000198894.8	ENST00000361786.7	4325	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	7.58653778449403	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTTTTGCTTTATA	-27	True	NA	10	True	AATAAA	-21	NA	77098257	77117287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113424
transcript_53747.known	chr14	-	3408	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	2	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATGATTGTATGGGC	-3	True	NA	-20	True	AATAAA	-21	NA	77141791	77131269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77133949_77139212_77139753_77141602
transcript_53750.known	chr14	-	1778	4	FSM	ENSG00000165553.5	ENST00000298352.5	1778	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.35702260395516	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGCCTGATCTTTTC	-1	True	NA	NA	False	AATAAA	-23	NA	77271206	77265482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77266671_77268465_77268586_77269214_77269327_77270848
transcript_53755.known	chr14	-	2729	21	FSM	ENSG00000009830.13	ENST00000682247.1	2729	21	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	26.1982346733516	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAAAATAGTCCAGGCT	421	False	NA	-44	True	AATACA	-32	NA	77320802	77277009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77277482_77278393_77278509_77278728_77278859_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_53765.known	chr14	-	5647	20	FSM	ENSG00000009830.13	ENST00000452340.7	5647	20	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	16.066344444917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGTTGTCCTTGTA	519	False	NA	-5	True	AATAAA	-15	NA	77320704	77274957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77277482_77278393_77278509_77278728_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_53766.known	chr14	-	4604	20	FSM	ENSG00000009830.13	ENST00000682467.1	4604	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.3096535041226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATTTGGTTTAAAAAAAA	396	False	NA	-77	True	NA	NA	NA	77320827	77275029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77277482_77278393_77278509_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_53770.nic	chr14	-	4450	17	NIC	ENSG00000009830.13	novel	4875	21	NA	NA	-34	0	intron_retention	TRUE	canonical	3	23	junction_13	24.8488398874072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTGTCCTTGTACT	306	False	NA	-3	True	AATAAA	-17	NA	77320917	77274955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_53771.nic	chr14	-	2406	17	NIC	ENSG00000009830.13	novel	4875	21	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	24.8488398874072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGGCTATAGTAATAT	306	False	NA	-34	True	CATAAA	-10	NA	77320917	77276999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_53776.known	chr14	+	1186	9	FSM	ENSG00000100577.19	ENST00000216465.10	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	19.3002590656188	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGTCTAAGACTGA	-6	True	NA	22	True	ATTAAA	-19	NA	77321035	77331597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_53782.known	chr14	+	867	8	FSM	ENSG00000100577.19	ENST00000349555.7	867	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	53.0832999604761	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTGGGCAGGAATAC	590	False	NA	-69	True	NA	NA	NA	77321024	77331393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_53784.known	chr14	+	919	8	FSM	ENSG00000100577.19	ENST00000556627.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.6788302271524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATCTATGTGACGGGGC	-4	True	NA	-49	True	NA	NA	NA	77321037	77331413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_53785.known	chr14	+	873	8	FSM	ENSG00000100577.19	ENST00000557639.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	50.4946956195825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAACTTGTTCCAC	585	False	NA	NA	False	NA	NA	NA	77321019	77331320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_53789.known	chr14	-	7761	6	FSM	ENSG00000100580.8	ENST00000216468.8	7761	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAACATCTGAGTTAT	-11	True	NA	-14	True	AATAAA	-16	NA	77377094	77335028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77341989_77343177_77343484_77343696_77343824_77346348_77346479_77351672_77351752_77376935
transcript_53794.known	chr14	-	2761	21	FSM	ENSG00000151445.16	ENST00000343765.6	2761	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	28.7288617943698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	21	True	NA	-15	True	AATAAA	-24	NA	77457561	77426674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094_77457366_77457494
transcript_53798.known	chr14	-	2530	20	FSM	ENSG00000151445.16	ENST00000557658.6	2530	20	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_12	10.5323666819209	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-19	True	NA	-15	True	AATAAA	-24	NA	77457601	77426674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
transcript_53799.known	chr14	-	2614	20	FSM	ENSG00000151445.16	ENST00000327028.8	2614	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	35.0881754356316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	21	True	NA	-15	True	AATAAA	-24	NA	77457561	77426674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77453298_77453402_77454009_77454103_77457094_77457366_77457494
transcript_53800.known	chr14	-	1623	19	FSM	ENSG00000151445.16	ENST00000448935.6	1623	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	24.9799919935936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAGTCATGAGAATG	-4	True	NA	NA	False	NA	NA	NA	77457586	77427419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77453298_77453402_77454009_77454103_77457494
transcript_53803.known	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	51.8095973252061	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	13	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_53804.known	chr14	+	1048	9	FSM	ENSG00000100591.8	ENST00000555133.5	1048	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	280.06249302611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGCGGCAGGGGACT	-4	True	NA	NA	False	ATTAAA	-32	NA	77457869	77469247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77457983_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_53809.known	chr14	+	588	3	FSM	ENSG00000100591.8	ENST00000554156.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATAGCCCAGGCTTGG	159	False	NA	NA	False	NA	NA	NA	77458032	77462319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77458270_77459615_77459807_77462159
transcript_53810.known	chr14	-	2940	7	FSM	ENSG00000100593.18	ENST00000342219.9	2940	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.03442593595562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTGATGAAGACTTT	-1	True	NA	0	True	AATAAA	-17	NA	77498816	77474393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77476113_77478241_77478326_77478574_77478716_77482321_77482668_77484322_77484566_77484676_77484920_77498652
transcript_53811.known	chr14	-	1739	6	FSM	ENSG00000100593.18	ENST00000493585.5	1739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.31516738055805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTGTTAGCCAGCAG	-1	True	NA	NA	False	NA	NA	NA	77498816	77475248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77476113_77478241_77478326_77478574_77478716_77484322_77484566_77484676_77484920_77498652
transcript_53813.known	chr14	-	8034	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	21.1327953977299	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTTTATTCATTCA	24	True	NA	0	True	AATAAA	-16	NA	77616637	77505996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
transcript_53819.known	chr14	-	2597	6	FSM	ENSG00000100601.10	ENST00000216489.8	2597	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	9.26066952223218	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGCTAGGTTCTTTG	-4	True	NA	-10	True	AATAAA	-21	NA	77708023	77672403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_53820.known	chr14	-	649	5	FSM	ENSG00000100601.10	ENST00000555100.1	649	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	44.7045858945142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATCCAGAAGGGGAAGG	9568	False	NA	NA	False	NA	NA	NA	77707992	77674102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77674242_77675655_77675795_77679879_77679971_77704368_77704478_77707821
transcript_53821.known	chr14	-	1750	5	FSM	ENSG00000100601.10	ENST00000557057.5	1750	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	35.27304211434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	9	True	NA	-45	True	AATAAA	-34	NA	77708010	77673074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77704368_77704478_77707821
transcript_53822.nic	chr14	-	830	4	NIC	ENSG00000100601.10	novel	497	3	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	41.515726605174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	9431	False	NA	NA	False	AATAAA	-16	NA	77708129	77691732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_77691983_77694737_77694901_77704368_77704478_77707821
transcript_53823.known	chr14	-	1966	14	FSM	ENSG00000100603.14	ENST00000556428.5	1966	14	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_13	179.83361804044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTTGTGTAAGAACAG	NA	False	NA	NA	False	NA	NA	NA	77761207	77717790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755099_77761113
transcript_53824.known	chr14	+	285	4	FSM	ENSG00000119705.10	ENST00000553981.1	285	4	0	0	0	0	multi-exon	FALSE	canonical	3	941	junction_2	6282.1247644054	1928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	83	False	NA	30	True	AATAAA	-18	NA	77708177	77717598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710837_77710881_77715771_77715880_77717495
transcript_53825.known	chr14	+	445	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7612.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATAGGTATTTGTGT	26	False	NA	NA	False	ATTAAA	-13	NA	77708120	77712038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710837_77710897_77711740
transcript_53827.known	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_13	63.9697598675717	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-5	True	NA	-26	True	AATAAA	-16	NA	77761156	77717598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_53828.known	chr14	+	729	3	FSM	ENSG00000119705.10	ENST00000556831.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	13904	junction_2	662.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCGGTGGTAGGCCAGG	24	False	NA	NA	False	AAAAAG	-3	NA	77708118	77716351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710837_77710897_77715771
transcript_53829.known	chr14	+	471	5	FSM	ENSG00000119705.10	ENST00000555890.5	471	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	6736.54329014518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTGTCTAAATGTT	19	False	NA	25	True	AATAAA	-13	NA	77708113	77717593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710554_77710666_77710837_77710897_77715771_77715880_77717495
transcript_53836.known	chr14	+	3268	11	FSM	ENSG00000063761.16	ENST00000238561.10	3268	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	8.09011742807235	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGGTTACTTGCTTTT	-10	True	NA	NA	False	AGTAAA	-23	NA	77800108	77935014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_53837.nnic	chr14	+	2069	10	NIC	ENSG00000063761.16	novel	3268	11	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	13.6064617909703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	NA	False	NA	17	True	AATAAA	-17	NA	77800047	77933952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77931517_77931712_77933219
transcript_5384.nic	chr1	-	2419	11	NIC	ENSG00000158062.21	novel	2542	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	46	junction_10	38.3860651799582	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-12	True	NA	NA	False	AATAAA	-17	NA	26306648	26282281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26306591
transcript_53842.known	chr14	+	1972	10	FSM	ENSG00000063761.16	ENST00000341211.5	1972	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.7921072437181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	20	True	NA	17	True	AATAAA	-17	NA	77800138	77933952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_53850.known	chr14	+	3381	6	FSM	ENSG00000021645.20	ENST00000557594.5	3381	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	4.16653333119993	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-35	NA	79279338	79862478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_79280539_79467220_79467403_79663777_79663950_79697629_79697938_79805111_79805191_79861038
transcript_53852.nic	chr14	+	3296	6	NIC	ENSG00000021645.20	novel	3085	7	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	7.88416133777081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTACAACAACAAAAAAAGA	-5	True	NA	NA	False	AAAACA	-3	NA	79279379	79862425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_79280539_79467220_79467403_79663777_79663950_79697629_79697938_79805111_79805200_79861038
transcript_53854.known	chr14	+	8504	6	FSM	ENSG00000021645.20	ENST00000281127.11	8504	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	6.73498329619309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCTCTAATTCTTTC	1	True	NA	NA	False	AATAAA	-23	NA	79279412	79868290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_79280539_79467220_79467403_79663777_79663950_79697629_79697938_79805111_79805200_79861662
transcript_53857.nic	chr14	+	2369	2	ISM	ENSG00000021645.20	ENST00000634499.2	5412	22	0	1617507	0	-400970	5prime_fragment	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAAATTTCTACCTGTG	-3	True	NA	NA	False	AAAAAG	-24	NA	78170372	78244457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_78170675_78242390
transcript_53861.known	chr14	-	6343	9	FSM	ENSG00000165417.12	ENST00000553612.6	6343	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	4.48434777866302	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATTTTGCAGTTTAA	-4	True	NA	0	True	AATAAA	-25	NA	81220959	81175451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_81180331_81185530_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
transcript_53865.nic	chr14	-	1992	6	NIC	ENSG00000140022.14	novel	11084	9	NA	NA	-17	686	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	8.68562030024339	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAGAAATACCAGCC	NA	False	NA	NA	False	TATAAA	-1	NA	81436482	81277789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_81278740_81370987_81371186_81395893_81396179_81398294_81398581_81427101_81427213_81436320
transcript_53868.known	chr14	-	7919	21	FSM	ENSG00000071537.14	ENST00000336735.9	7919	21	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_15	20.4242502922384	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCCACTGCCTCC	-13	True	NA	NA	False	TATAAA	-19	NA	81533853	81471546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_81477182_81479611_81479741_81484224_81484398_81485671_81485747_81486288_81486455_81487389_81487539_81487854_81487943_81489251_81489315_81490387_81490466_81492479_81492549_81495080_81495138_81497891_81498047_81498412_81498495_81499458_81499519_81499608_81499663_81502720_81502884_81504200_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
transcript_53879.known	chr14	-	3794	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	15.4631618694237	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-2	True	NA	-2	True	ATTAAA	-18	NA	87993182	87933013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_53882.known	chr14	-	1221	10	FSM	ENSG00000054983.17	ENST00000622264.4	1221	10	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	16.6733320005331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTGTTTTACATGTAA	-5	True	NA	-6	True	AATAAA	-14	NA	87993154	87963313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_53884.known	chr14	-	2396	7	FSM	ENSG00000100433.16	ENST00000312350.9	2396	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.21335164821342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAACACATCACACTGT	10	False	NA	NA	False	AAGAAA	-9	NA	88270911	88184892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_88186156_88187966_88188110_88192223_88192411_88227374_88227536_88240702_88240821_88263201_88263552_88270737
transcript_53885.known	chr14	-	7501	7	FSM	ENSG00000100433.16	ENST00000340700.9	7501	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.60727512683216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTTCTGTTTTCCTTT	23	False	NA	NA	False	NA	NA	NA	88326907	88180102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_88186156_88187966_88188110_88192223_88192411_88227374_88227536_88240702_88240821_88263201_88263552_88326418
transcript_53889.known	chr14	+	2000	12	FSM	ENSG00000042317.17	ENST00000393545.9	2000	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	15.9684606502064	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	-21	True	NA	15	True	AATAAA	-25	NA	88385656	88438460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_5389.nic	chr1	-	2311	11	NIC	ENSG00000158062.21	novel	2542	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	15	junction_10	65.5701151440197	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-2	True	NA	NA	False	AATAAA	-17	NA	26306638	26282281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
transcript_53893.known	chr14	+	1891	11	FSM	ENSG00000042317.17	ENST00000356583.9	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	14.5684590811795	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTACTTTTCTTCCTTT	-10	True	NA	13	True	AATAAA	-23	NA	88385667	88438458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_53899.known	chr14	+	18153	17	FSM	ENSG00000100722.20	ENST00000251038.10	18153	17	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_10	172.532967864116	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTATTCTTGTTTTTT	-15	True	NA	NA	False	ATTAAA	-17	NA	88563036	88627596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_53901.known	chr14	+	2529	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	237.996980022857	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	-14	True	NA	NA	False	NA	NA	NA	88563037	88611991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_53905.known	chr14	+	2195	16	FSM	ENSG00000100722.20	ENST00000393514.9	2195	16	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	224.904364860563	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTCTACAGAACTTGTC	41	False	NA	-44	True	NA	NA	NA	88563133	88611810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_53907.nic	chr14	+	2392	16	NIC	ENSG00000100722.20	novel	6188	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_9	235.513585359505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAGTGTCTAATTTT	4	True	NA	32	True	AATATA	-34	NA	88563009	88611886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_53913.known	chr14	+	2075	15	FSM	ENSG00000100722.20	ENST00000556945.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	201.80744510042	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	4	True	NA	30	True	AATATA	-32	NA	88563009	88611884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_53915.nic	chr14	+	2138	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_10	215.353198258117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAGTGTCTAATTTT	NA	False	NA	32	True	AATATA	-34	NA	88562945	88611886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_53916.nic	chr14	+	3180	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_10	215.353198258117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	-9	True	NA	71	True	AATAAA	-35	NA	88562996	88612979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_53923.nic	chr14	+	2015	14	NIC	ENSG00000100722.20	novel	2075	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_9	220.809886366439	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAGTGTCTAATTTT	-9	True	NA	32	True	AATATA	-34	NA	88562996	88611886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_53924.nic	chr14	+	3159	14	NIC	ENSG00000100722.20	novel	2195	16	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_9	220.809886366439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	NA	False	NA	71	True	AATAAA	-35	NA	88562945	88612979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_53925.known	chr14	+	2560	14	FSM	ENSG00000100722.20	ENST00000302216.12	2560	14	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_9	234.441524483968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAATAGGAACAGTT	0	True	NA	NA	False	NA	NA	NA	88562969	88612407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_53933.nic	chr14	+	1468	9	ISM	ENSG00000100722.20	ENST00000556945.5	2075	15	-64	33743	-24	0	5prime_fragment	FALSE	canonical	3	694	junction_6	91.7652405598111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTTAAATGATGTTT	NA	False	NA	NA	False	ATTAAA	-42	NA	88562945	88578141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984
transcript_53935.known	chr14	+	2183	15	FSM	ENSG00000165533.19	ENST00000380656.7	2183	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.8796448288003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-12	True	NA	11	True	AATAAA	-19	NA	88824650	88877988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88833692_88833723_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_53936.known	chr14	+	5270	14	FSM	ENSG00000165533.19	ENST00000622513.4	5270	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	16.9911219421223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTTTTTTTTTT	-39	True	NA	NA	False	ATTAAA	-13	NA	88824623	88881078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_53939.known	chr14	+	2058	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	12.3524626424585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-7	True	NA	11	True	AATAAA	-19	NA	88824655	88877988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_53940.known	chr14	+	1859	12	FSM	ENSG00000165533.19	ENST00000554686.5	1859	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	16.6256796294316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTTAAAATAAATCATTG	76	False	NA	-21	True	ATTAAA	-21	NA	88824738	88877956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88877293
transcript_53945.nic	chr14	-	3051	8	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-36	250	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	65.4248283395937	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTATTCAAAAGTAA	-22	True	NA	NA	False	AAAAAG	-29	NA	89619185	89161110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_53946.nic	chr14	-	2762	8	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	65.4248283395937	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	-22	True	NA	6	True	NA	NA	NA	89619185	89161399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_53949.nic	chr14	-	2529	8	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-36	-233	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	65.4248283395937	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAAGCCTGAAGATTGG	-22	True	NA	-5	True	ATTAAA	-20	NA	89619185	89161632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_5395.known	chr1	-	2325	10	FSM	ENSG00000158062.21	ENST00000494942.5	2325	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	61.6028699026832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	3	True	NA	NA	False	AATAAA	-15	NA	26306633	26282283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26297426_26297482_26297961_26298063_26306591
transcript_53950.nic	chr14	-	3001	7	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-52	250	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	54.462270324408	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTATTCAAAAGTAA	-38	True	NA	NA	False	AAAAAG	-29	NA	89619201	89161110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_53952.nic	chr14	-	2696	7	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	54.462270324408	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	-22	True	NA	6	True	NA	NA	NA	89619185	89161399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_53955.nic	chr14	-	2463	7	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-36	-233	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	54.462270324408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAAGCCTGAAGATTGG	-22	True	NA	-5	True	ATTAAA	-20	NA	89619185	89161632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_53961.known	chr14	-	2421	5	FSM	ENSG00000053254.16	ENST00000615335.4	2421	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	38.8458491991101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	6073	False	NA	6	True	NA	NA	NA	89412476	89161399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933
transcript_53963.known	chr14	-	3136	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	14.5794375748861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGATCAATGGTATCATTG	4	True	NA	NA	False	AATAAA	-20	NA	89954730	89794668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_53964.known	chr14	-	2716	6	FSM	ENSG00000140025.16	ENST00000555872.5	2716	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	72.4966206108947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGCTGGGCGTGGTGGC	2016	False	NA	NA	False	AATACA	-14	NA	89954557	89795146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_53971.known	chr14	+	3722	17	FSM	ENSG00000042088.14	ENST00000335725.9	3722	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	107.025241619676	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	-22	True	NA	18	True	AATAAA	-18	NA	89955926	90044764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_53976.nic	chr14	+	2572	17	NIC	ENSG00000042088.14	novel	2370	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	121.904675874226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTTATATGTTTTGG	13	True	NA	7	True	AATAAA	-16	NA	89955961	90043341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_89956279_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_53991.known	chr14	+	2068	16	FSM	ENSG00000042088.14	ENST00000393454.6	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	74.2962239207948	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATATGTTTTGGAAA	-11	True	NA	10	True	AATAAA	-19	NA	89955937	90043344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_53998.nic	chr14	+	2349	16	NIC	ENSG00000042088.14	novel	2370	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	96.7332184699525	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTTATATGTTTTGG	13	True	NA	7	True	AATAAA	-16	NA	89955961	90043341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_89956279_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_53999.nic	chr14	+	3772	16	NIC	ENSG00000042088.14	novel	3722	17	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	96.7332184699525	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	13	True	NA	18	True	AATAAA	-18	NA	89955961	90044764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_89956279_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_54.known	ERCC-00156	+	478	1	FSM	ERCC-00156A	DQ883643	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00156_+_0_500
transcript_54018.known	chr14	-	14008	14	FSM	ENSG00000119720.18	ENST00000354366.8	14008	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	7.83634379182464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGAGTCTGTCTTGG	13	True	NA	-4	True	AATAAA	-14	NA	90331941	90267859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90278462_90279061_90279134_90286353_90286493_90288216_90289146_90290220_90290608_90292696_90292873_90298259_90298381_90301238_90301373_90302719_90303126_90303934_90304383_90312393_90312544_90316577_90316812_90318004_90318114_90331840
transcript_5402.nnic	chr1	-	1213	9	NIC	ENSG00000158062.21	novel	1660	15	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	51.5398814026575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	408	False	NA	NA	False	AATAAA	-17	NA	26306656	26282281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26306591
transcript_54022.known	chr14	+	4390	11	FSM	ENSG00000100764.14	ENST00000261303.13	4390	11	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_1	238.590360241146	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCAGTATTGCCTTTT	-4	True	NA	NA	False	ATTAAA	-18	NA	90256552	90275429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_54026.known	chr14	+	577	4	FSM	ENSG00000100764.14	ENST00000554624.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_1	364.92038705571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGGATGATCTGAG	0	True	NA	NA	False	NA	NA	NA	90256527	90263670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317
transcript_54027.known	chr14	-	580	4	FSM	ENSG00000119720.18	ENST00000557106.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.3275853524323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCGAAGTAGGTTGCTG	-15	True	NA	NA	False	AGTAAA	-12	NA	90331969	90316586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90316812_90317703_90317821_90318004_90318114_90331840
transcript_54028.nic	chr14	-	367	3	ISM	ENSG00000119720.18	ENST00000354366.8	14008	14	-62	48857	-34	-130	5prime_fragment	FALSE	canonical	3	37	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCATCAGCATCATAAG	-6	True	NA	NA	False	AAAAAG	-23	NA	90332003	90316716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_90316812_90318004_90318114_90331840
transcript_54029.known	chr14	+	1104	7	FSM	ENSG00000198668.14	ENST00000447653.8	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	3999.33063843883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATGAAAAAA	-1	True	NA	8	True	NA	NA	NA	90397028	90405072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90398990_90399088_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_54033.known	chr14	+	4203	6	FSM	ENSG00000198668.14	ENST00000356978.9	4203	6	0	0	0	0	multi-exon	FALSE	canonical	3	8699	junction_5	425.749691720382	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAACTGTGTAGGTTTC	-1	True	NA	39	True	AATAAA	-26	NA	90397028	90408268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_54036.known	chr14	+	877	6	FSM	ENSG00000198668.14	ENST00000553542.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	3598.73463317317	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACAGTCAGGCCTTTG	26	False	NA	-16	True	AATACA	-43	NA	90397055	90405048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397155_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_54044.known	chr14	+	583	4	FSM	ENSG00000198668.14	ENST00000553995.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	8938	junction_3	385.9398341135	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCTGAGCCTCTGATC	2	True	NA	NA	False	NA	NA	NA	90397031	90404067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861
transcript_54047.known	chr14	-	19471	20	FSM	ENSG00000165914.15	ENST00000328459.11	19471	20	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_10	10.5110415497149	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTGGGATTTTTC	-9	True	NA	NA	False	AATAAA	-17	NA	90816430	90524563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90541590_90578105_90578309_90593485_90593627_90610741_90610840_90617928_90618046_90644047_90644209_90646950_90647024_90652840_90652899_90654992_90655111_90657173_90657279_90658303_90658388_90676522_90676661_90680471_90680536_90689539_90689713_90695499_90695579_90730074_90730197_90744791_90744923_90780737_90780907_90786173_90786329_90816174
transcript_54049.known	chr14	-	26829	17	FSM	ENSG00000100784.12	ENST00000614987.5	26829	17	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_10	5.63713967806369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTTGGACTTGTGG	-24	True	NA	NA	False	AATAAA	-24	NA	91060641	90847860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_54055.known	chr14	-	2249	13	FSM	ENSG00000100784.12	ENST00000418736.6	2249	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	6.37867541108654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAAGAGTTGTCTTGG	17	True	NA	NA	False	AATAAA	-24	NA	91060600	90893973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_54059.nic	chr14	+	2861	16	NIC	ENSG00000133943.21	novel	2719	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	31.1526706541974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	-19	True	NA	23	True	AATAAA	-19	NA	91114062	91225355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91114284_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_54065.nic	chr14	+	2783	15	NIC	ENSG00000133943.21	novel	2719	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	28.0578847734319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	-19	True	NA	23	True	AATAAA	-19	NA	91114062	91225355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91114284_91145220_91145314_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_5407.nnic	chr1	-	2194	8	NIC	ENSG00000158062.21	novel	2542	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	19	junction_7	54.1739450892273	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	408	False	NA	NA	False	AATAAA	-17	NA	26306656	26282281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26306591
transcript_54072.nic	chr14	+	2891	14	NIC	ENSG00000133943.21	novel	2435	13	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	23.3747448804228	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	NA	False	NA	23	True	AATAAA	-19	NA	91060282	91225355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91060705_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_54073.nic	chr14	+	2660	14	NIC	ENSG00000133943.21	novel	2814	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	26.4004213701356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	-25	True	NA	23	True	AATAAA	-19	NA	91114056	91225355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173404_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_54074.known	chr14	+	2957	14	FSM	ENSG00000133943.21	ENST00000256324.15	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	18.4823600531992	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAAGTCTTTTTTTTTG	-9	True	NA	NA	False	CATAAA	-21	NA	91114072	91225632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_54078.nic	chr14	+	2651	14	NIC	ENSG00000133943.21	novel	2764	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	18.259471077325	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	201	False	NA	23	True	AATAAA	-19	NA	91114346	91225355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_54092.known	chr14	+	2538	14	FSM	ENSG00000133943.21	ENST00000428926.6	2538	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.6903484585767	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTCTTCGGAA	3	True	NA	20	True	AATAAA	-16	NA	91114441	91225352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_54093.known	chr14	+	2764	16	FSM	ENSG00000133943.21	ENST00000523816.5	2764	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.0758981310261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	-6	True	NA	23	True	AATAAA	-19	NA	91114389	91225355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_54094.known	chr14	-	2859	2	FSM	ENSG00000119714.11	ENST00000531499.2	2859	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTGGGAGTATGCTGCA	102	False	NA	NA	False	AATAAA	-15	NA	91253925	91232531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91235180_91253714
transcript_54095.known	chr14	-	7519	30	FSM	ENSG00000015133.20	ENST00000389857.11	7519	30	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_19	23.7352119302642	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTTCTGGCTTTCCTCA	28	True	NA	-4	True	AATAAA	-17	NA	91417820	91271322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91273654_91277921_91278212_91279237_91279307_91281456_91281526_91283328_91283518_91289104_91289344_91290994_91291085_91294172_91294319_91297304_91297492_91299926_91300071_91303700_91303979_91305764_91305927_91307037_91307227_91308350_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
transcript_54097.nic	chr14	-	3148	17	ISM	ENSG00000015133.20	ENST00000389857.11	7519	30	-85	37101	-61	5519	5prime_fragment	FALSE	canonical	3	48	junction_6	8.71779788708135	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGCTCTTAGAAGCAC	NA	False	NA	13	True	ATTAAA	-28	NA	91417905	91308423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
transcript_54103.known	chr14	-	1651	4	FSM	ENSG00000015133.20	ENST00000553403.1	1651	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.1011567089577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACTACATAAAAAAGAGC	4	True	NA	NA	False	NA	NA	NA	91417844	91378658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91379886_91408658_91408768_91416737_91416839_91417630
transcript_54108.nic	chr14	-	4130	16	NIC	ENSG00000100796.18	novel	4108	15	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_15	168.948065655955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTAGTTGTATGTTTC	9	True	NA	-7	True	AATAAA	-25	NA	91510536	91457610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505_91509705_91510074
transcript_54111.nic	chr14	-	3602	16	NIC	ENSG00000100796.18	novel	4108	15	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_15	168.948065655955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	9	True	NA	-40	True	ATTAAA	-18	NA	91510536	91458138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505_91509705_91510074
transcript_54112.known	chr14	-	4416	15	FSM	ENSG00000100796.18	ENST00000554943.6	4416	15	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_8	132.934558858017	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCACCTGTCACCTTATT	-20	True	NA	-5	True	AATAAA	-16	NA	91510310	91457507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_54113.known	chr14	-	4108	15	FSM	ENSG00000100796.18	ENST00000554684.5	4108	15	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_8	102.898429213929	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTAGTTGTATGTTTC	401	False	NA	-7	True	AATAAA	-25	NA	91510144	91457610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_5412.known	chr1	+	751	3	FSM	ENSG00000142669.15	ENST00000270792.10	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	30	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGGTTGGTTGTGG	3	True	NA	36	True	ATTAAA	-22	NA	26280085	26281522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26280204_26280764_26280933_26281057
transcript_54126.nic	chr14	-	3088	13	ISM	ENSG00000100796.18	ENST00000554943.6	4416	15	-266	4546	-22	0	5prime_fragment	FALSE	canonical	3	217	junction_6	133.69669238824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTATGTTGGAAAAAA	NA	False	NA	-5	True	AGTAAA	-15	NA	91510576	91462053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_54127.known	chr14	-	2953	13	FSM	ENSG00000100796.18	ENST00000554390.5	2953	13	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	100.29692030278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTATGTTGGAAAAAA	8	True	NA	-5	True	AGTAAA	-15	NA	91510480	91462053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_54131.known	chr14	-	3751	12	FSM	ENSG00000165929.13	ENST00000360594.9	3751	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	8.92484692092719	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTCAGGTACAGAAGT	4	True	NA	NA	False	AATAAA	-31	NA	91836447	91780954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_54136.known	chr14	-	2625	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.85227205685164	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTGGTTCATTTT	-12	True	NA	-1	True	ATTAAA	-13	NA	91947694	91869410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
transcript_54138.known	chr14	-	9996	21	FSM	ENSG00000100815.12	ENST00000267622.8	9996	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	11.0239511972795	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGACTTTTTCTTTAG	-9	True	NA	0	True	AATAAA	-19	NA	92040059	91965990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91969894_91972716_91972862_91974626_91974744_91975171_91975287_91976107_91976190_91988283_91988384_91993808_91993913_91995351_91995516_91999239_91999434_91999967_92000109_92003418_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_5414.known	chr1	+	768	2	FSM	ENSG00000142669.15	ENST00000319041.6	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGGCCCCGCAGTCC	-1	True	NA	-36	True	NA	NA	NA	26280121	26281450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26280204_26280764
transcript_54145.known	chr14	-	6950	12	FSM	ENSG00000066427.25	ENST00000545170.5	6950	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.8663826931687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	NA	False	NA	-10	True	AATAAA	-20	NA	92106621	92058551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080540_92080568_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_54149.known	chr14	-	6884	11	FSM	ENSG00000066427.25	ENST00000644486.2	6884	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	36.8667872210205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-8	True	NA	-10	True	AATAAA	-20	NA	92106582	92058551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_5415.known	chr1	+	467	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTCCTGCTTGTGGTT	0	True	NA	19	True	AATAAA	-19	NA	26317957	26320523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26318072_26320170
transcript_54152.known	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_8	60.7303288275815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	11	False	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
transcript_54153.known	chr14	-	2572	10	FSM	ENSG00000066427.25	ENST00000359366.10	2572	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	64.6941522344434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAAAAATATCTTTT	-16	True	NA	NA	False	NA	NA	NA	92106590	92062785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096138_92096673_92096839_92106528
transcript_54154.known	chr14	-	1205	10	FSM	ENSG00000066427.25	ENST00000340660.10	1205	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	66.1664567586931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	1	True	NA	-10	True	ATTAAA	-14	NA	92106610	92064093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_54155.known	chr14	-	1022	10	FSM	ENSG00000066427.25	ENST00000553309.5	1022	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.3399832635618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	0	True	NA	NA	False	NA	NA	NA	92106574	92070937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92071054_92080952_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_54156.known	chr14	-	857	9	FSM	ENSG00000066427.25	ENST00000555958.5	857	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.9318337237898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	0	True	NA	NA	False	NA	NA	NA	92106574	92070937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92071054_92080952_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_54161.known	chr14	-	454	4	FSM	ENSG00000183648.11	ENST00000553514.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1245.41746682254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTCTTTTCATACAAAG	-23	True	NA	-16	True	AATAAA	-20	NA	92121724	92116121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92116230_92117497_92117643_92118848_92118967_92121641
transcript_54163.known	chr14	-	458	3	FSM	ENSG00000183648.11	ENST00000555441.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	595	False	NA	-20	True	AATAAA	-16	NA	92121404	92116125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92116230_92117497_92117643_92121195
transcript_54164.known	chr14	-	417	3	FSM	ENSG00000183648.11	ENST00000617122.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	43	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	190	False	NA	-20	True	AATAAA	-16	NA	92121809	92116125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92116230_92117497_92117643_92121641
transcript_54166.known	chr14	+	13003	16	FSM	ENSG00000165934.13	ENST00000298875.9	13003	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.7861545080197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGACTGTGTATAGT	-5	True	NA	3	True	AATAAA	-16	NA	92121968	92172145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357_92154459_92155122_92155324_92156478_92156632_92157658_92157885_92158982_92159283_92161111_92161247_92161651
transcript_54173.nic	chr14	+	1467	10	ISM	ENSG00000165934.13	ENST00000298875.9	13003	16	-20	17734	-20	-742	5prime_fragment	FALSE	canonical	0	0	junction_1	73.1387992150355	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAACTAAAGAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	92121948	92154411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357
transcript_54176.known	chr14	+	3852	10	FSM	ENSG00000100599.16	ENST00000216487.12	3852	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTCTGAAGGGGCTG	-26	True	NA	17	True	AATAAA	-18	NA	92513780	92688994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92513977_92555750_92555956_92577359_92577478_92615406_92615480_92641237_92641330_92651581_92653076_92659160_92659470_92676474_92676607_92684986_92685151_92687925
transcript_54177.known	chr14	+	2814	9	FSM	ENSG00000100599.16	ENST00000555589.5	2814	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.11999599358717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCAGGCGCACCGGC	-14	True	NA	NA	False	NA	NA	NA	92513792	92688041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92513977_92555750_92555956_92577359_92577478_92641237_92641330_92651581_92653076_92659160_92659470_92676474_92676607_92684986_92685151_92687925
transcript_54179.nnic	chr14	-	1837	2	Antisense	novelGene_ENSG00000100599.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAACGCCGTAAAACAAG	1417	False	NA	NA	False	AAAAAG	-4	NA	92628005	92623610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr14_-_92625057_92627614
transcript_54182.known	chr14	-	1980	14	FSM	ENSG00000100600.15	ENST00000334869.9	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	47.9414090137623	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-2	True	NA	-14	True	AATAAA	-21	NA	92748627	92703808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_54183.known	chr14	-	1797	13	FSM	ENSG00000100600.15	ENST00000557434.5	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	138.616276902181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	5	True	NA	-44	True	NA	NA	NA	92748645	92703838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92704362_92704639_92704708_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_54184.nnic	chr14	-	1929	13	NIC	ENSG00000100600.15	novel	1980	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_1	136.440666795335	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	6	True	NA	-14	True	AATAAA	-21	NA	92748644	92703808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_92704362_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_54186.known	chr14	-	1728	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	146.095745804417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCCGACACTGACTT	38	False	NA	-12	True	AATAAA	-23	NA	92748612	92703806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_54192.known	chr14	+	2879	13	FSM	ENSG00000066455.13	ENST00000163416.7	2879	13	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	23.0663294773043	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTTCTAAAATAAT	-32	True	NA	NA	False	AATAAA	-14	NA	92794304	92839947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92837385_92837450_92839365
transcript_5420.known	chr1	-	554	4	FSM	ENSG00000176092.17	ENST00000520372.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	27.3901847788988	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGGGAGAAGTGCGG	59	False	NA	NA	False	NA	NA	NA	26336383	26328608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26328874_26331488_26331619_26336094_26336208_26336337
transcript_54204.known	chr14	+	1985	8	FSM	ENSG00000100604.13	ENST00000216492.10	1985	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	13.8091953983938	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAATTTTTTCGCCTC	0	True	NA	16	True	AATAAA	-18	NA	92923149	92935285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92923406_92924198_92924246_92926604_92926699_92927549_92927619_92929716_92929816_92931249_92931703_92932369_92932852_92934800
transcript_54209.known	chr14	-	3174	11	FSM	ENSG00000100605.17	ENST00000556603.6	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	114.163961038499	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCAGGTACGGGTG	36	True	NA	-37	True	AATAAA	-37	NA	93115871	92939752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115185_93115771
transcript_54221.known	chr14	-	2803	11	FSM	ENSG00000100605.17	ENST00000354313.7	2803	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	134.419529831048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGTGTCCTTCTGTGC	-11	True	NA	-1	True	AATAAA	-18	NA	93115918	92936913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92938527_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115306_93115771
transcript_54224.known	chr14	-	6188	11	FSM	ENSG00000100605.17	ENST00000267615.11	6188	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	91.3496579085001	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGTGTCCTTCTGTGC	-18	True	NA	-1	True	AATAAA	-18	NA	93115925	92936913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115306_93115771
transcript_54236.nic	chr14	-	3299	10	ISM	ENSG00000100605.17	ENST00000556603.6	3174	11	462	0	-123	0	3prime_fragment	FALSE	canonical	3	346	junction_6	29.1386638059308	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCAGGTACGGGTG	498	False	NA	-37	True	AATAAA	-37	NA	93115409	92939752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068
transcript_54241.nic	chr14	-	3190	10	ISM	ENSG00000100605.17	ENST00000556603.6	3174	11	462	109	-123	0	3prime_fragment	FALSE	canonical	3	346	junction_6	29.1386638059308	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACACGTGTTTACACAT	498	False	NA	-18	True	AATAAA	-20	NA	93115409	92939861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068
transcript_54248.known	chr14	-	3035	9	FSM	ENSG00000100605.17	ENST00000555495.5	3035	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	112.428588446178	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACACGTGTTTACACAT	2	True	NA	-18	True	AATAAA	-20	NA	93115279	92939861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93115068
transcript_54263.known	chr14	-	2407	3	FSM	ENSG00000165943.5	ENST00000298894.5	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	20	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	-17	True	NA	-20	True	AATAAA	-16	NA	93184897	93182198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93184363_93184558_93184714_93184809
transcript_54264.known	chr14	-	2529	2	FSM	ENSG00000165943.5	ENST00000556883.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	4	False	NA	-20	True	AATAAA	-16	NA	93184923	93182198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93184363_93184558
transcript_54265.known	chr14	+	3494	11	FSM	ENSG00000012963.15	ENST00000013070.11	3494	11	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_2	29.7430664189152	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	-4	True	NA	14	True	AATAAA	-15	NA	93207255	93229215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93207442_93209823_93209958_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_54270.known	chr14	+	1276	10	FSM	ENSG00000012963.15	ENST00000553674.1	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	87.096087139789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	-17	True	NA	21	True	AATAAA	-22	NA	93207242	93227118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93207442_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_54274.known	chr14	+	909	2	FSM	ENSG00000153485.6	ENST00000283534.4	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGCTTGCTTTAAAA	NA	False	NA	7	True	CATAAA	-18	NA	93184950	93187086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93185033_93186259
transcript_54275.known	chr14	+	2373	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGCATTTCTTTTCT	2	True	NA	5	True	AATACA	-18	NA	93185316	93188463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93185486_93186259
transcript_54276.known	chr14	-	1125	2	FSM	ENSG00000170270.5	ENST00000306954.5	1125	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTTTCTT	-11	True	NA	-3	True	AATATA	-14	NA	93207065	93202893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93203783_93206829
transcript_54280.known	chr14	-	8445	11	FSM	ENSG00000011114.15	ENST00000334746.10	8445	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	15.2918278828922	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGAGTTGGATACAGT	2	True	NA	-13	True	AATAAA	-15	NA	93333036	93237549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93243089_93245824_93246287_93248475_93248655_93251462_93251653_93253646_93253791_93257194_93257356_93261601_93261678_93263784_93263994_93293857_93294938_93295969_93296158_93332819
transcript_54281.known	chr14	-	2697	9	FSM	ENSG00000011114.15	ENST00000554565.5	2697	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	20.733050306214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAGCAGGCTGGCACT	-1	True	NA	NA	False	NA	NA	NA	93333039	93242032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93243089_93245824_93246287_93248475_93248655_93251462_93251653_93253646_93253791_93257194_93257356_93261601_93261678_93263784_93263994_93332819
transcript_54282.known	chr14	-	2621	4	FSM	ENSG00000011114.15	ENST00000298896.7	2621	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	23.2283351869125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGGCTCTTGTGGTGC	206	False	NA	0	True	ATTAAA	-19	NA	93333092	93287627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93288708_93293857_93294938_93295969_93296158_93332819
transcript_54286.known	chr14	-	2168	3	FSM	ENSG00000100628.12	ENST00000553883.1	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGCCCAGTGAAGTCC	NA	False	NA	-14	True	AATAAA	-14	NA	93940495	93934166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93934793_93937697_93937852_93939107
transcript_54290.known	chr14	-	2769	9	FSM	ENSG00000089737.18	ENST00000555054.1	2769	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	264.167560461159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTAAACTTGATTTC	3	True	NA	10	True	NA	NA	NA	94081202	94050964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079622_94081118
transcript_54291.known	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	98.6280100934821	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	3	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_54294.known	chr14	-	2214	8	FSM	ENSG00000089737.18	ENST00000544005.5	2214	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	286.967323746031	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTGTGTCATCCTGAT	3	True	NA	-19	True	ATTAAA	-13	NA	94081202	94050922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94081118
transcript_54295.known	chr14	-	5573	8	FSM	ENSG00000089737.18	ENST00000555762.1	5573	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_5	105.369708693742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCATCCTGATTTT	7	True	NA	-16	True	ATTAAA	-16	NA	94081198	94050919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_54298.known	chr14	+	3911	6	FSM	ENSG00000089723.10	ENST00000203664.10	3911	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	5.16139516022558	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTGTCCTGGCTTCT	-18	True	NA	17	True	ATTAAA	-14	NA	94026339	94048930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94026541_94037379_94037476_94038962_94039082_94043970_94044056_94044585_94044781_94045715
transcript_54305.known	chr14	+	708	3	FSM	ENSG00000089723.10	ENST00000553723.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGCCCCGGTGTTCTGC	20	True	NA	NA	False	AAAAAG	-3	NA	94026377	94039411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94026541_94037379_94037476_94038962
transcript_54307.known	chr14	-	810	2	FSM	ENSG00000089737.18	ENST00000555324.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGATAATTGGGAGAGA	59	False	NA	NA	False	NA	NA	NA	94081146	94078965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94079748_94081118
transcript_54308.known	chr14	+	615	6	FSM	ENSG00000165948.11	ENST00000554166.5	615	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	53.5932831612321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGGCTGGGTTCACCC	7	True	NA	NA	False	GGGGCT	-19	NA	94081355	94102536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096886_94096966_94097491_94097679_94100738_94100772_94101813_94101976_94102476
transcript_54309.known	chr14	+	804	6	FSM	ENSG00000165948.11	ENST00000556381.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	57.769888350247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACAAGTCTCCTACTC	7	True	NA	-49	True	NA	NA	NA	94081355	94102641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096886_94096966_94097491_94097679_94100738_94100772_94101813_94102060_94102476
transcript_54311.known	chr14	+	629	6	FSM	ENSG00000165948.11	ENST00000555341.5	629	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	38.2549343222544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTTCACCCCCTTC	26	False	NA	NA	False	GGGGCT	-24	NA	94081374	94102541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096855_94096966_94097494_94097679_94100738_94100772_94101813_94101976_94102476
transcript_54313.known	chr14	+	647	5	FSM	ENSG00000165948.11	ENST00000555523.6	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	8.22724133595217	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	4	True	NA	19	True	AATAAA	-17	NA	94081309	94102709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_54315.nic	chr14	+	703	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	32.5221078652661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	19	True	AATAAA	-17	NA	94081284	94102709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94101976_94102476
transcript_54318.nic	chr14	+	2406	4	NIC	ENSG00000165948.11	novel	804	6	NA	NA	-20	3	intron_retention	FALSE	canonical	3	52	junction_3	39.3813266522205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTCGGTTCTCTGTTCT	NA	False	NA	22	True	AATAAA	-20	NA	94081280	94102712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_94081450_94096886_94096966_94097494_94097679_94100738
transcript_54319.known	chr14	+	413	4	FSM	ENSG00000165948.11	ENST00000557218.5	413	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	59.5371032774241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	33	False	NA	19	True	AATAAA	-17	NA	94081381	94102709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94102476
transcript_54325.known	chr14	+	828	3	FSM	ENSG00000165948.11	ENST00000557600.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTGGAGATTTTGGG	5	True	NA	NA	False	AAAACA	-36	NA	94081310	94101348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096886_94096966_94100738
transcript_54327.known	chr14	+	674	5	FSM	ENSG00000165948.11	ENST00000393115.7	674	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.8088901493419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	23	False	NA	19	True	AATAAA	-17	NA	94081328	94102709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096840_94096966_94100738_94100772_94101813_94101976_94102476
transcript_5433.nnic	chr1	+	3405	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-78	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1155.30104301866	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	NA	False	NA	31	True	AATAAA	-23	NA	26410738	26429722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428496_26429137
transcript_54332.known	chr14	-	451	4	FSM	ENSG00000119632.4	ENST00000238609.4	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	35.8360464089194	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	-19	True	NA	-11	True	AATAAA	-18	NA	94129604	94127780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94127993_94128513_94128676_94129261_94129292_94129557
transcript_54333.known	chr14	-	516	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGCTTCTTGCA	277	False	NA	-9	True	AATAAA	-20	NA	94129401	94127778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94127993_94128513_94128676_94129261
transcript_54334.known	chr14	+	3857	25	FSM	ENSG00000119698.12	ENST00000304338.8	3857	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	4.27017271313468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGTGTTTGTGAAAAAA	8	True	NA	14	True	AATAAA	-17	NA	94174321	94279734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94174583_94176053_94176128_94208463_94208567_94230586_94230735_94231241_94231316_94233652_94233760_94234561_94234670_94237564_94237687_94240672_94240796_94241787_94241958_94242288_94242409_94244634_94244713_94245586_94245671_94246356_94246540_94250171_94250278_94251748_94251897_94256459_94256605_94258782_94258825_94259294_94259370_94264877_94264948_94265386_94265474_94265793_94265888_94266958_94267030_94275373_94275522_94278618
transcript_54336.known	chr14	+	876	5	FSM	ENSG00000119698.12	ENST00000328839.3	876	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	9.85837207656518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAAGTGATGTATACTG	-8	True	NA	17	True	AATAAA	-18	NA	94174337	94227846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94174583_94176053_94176128_94208463_94208567_94227285_94227379_94227485
transcript_54337.known	chr14	-	1486	5	FSM	ENSG00000186910.4	ENST00000334708.4	1486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGGAGCAATCCTTAC	-12	True	NA	0	True	AATAAA	-22	NA	94452800	94442463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94442810_94443077_94443226_94446330_94446605_94448131_94448778_94452728
transcript_54338.known	chr14	+	2278	6	FSM	ENSG00000188488.14	ENST00000329597.12	2278	6	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	6.52380257212004	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAACTGTCTTTATGGA	-12	True	NA	10	True	AATAAA	-18	NA	94581425	94593118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94581491_94581614_94581711_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_54339.known	chr14	-	1140	3	FSM	ENSG00000133937.5	ENST00000238558.5	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	8	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGCCACATTCTGTATT	2	True	NA	-8	True	AATAAA	-15	NA	94770113	94768222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94768650_94768957_94769218_94769660
transcript_5434.nnic	chr1	+	3556	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-208	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1155.30104301866	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	NA	False	NA	31	True	AATAAA	-23	NA	26410608	26429722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428517_26429137
transcript_54343.known	chr14	-	7423	29	FSM	ENSG00000100697.15	ENST00000393063.6	7423	29	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_27	28.279039616519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTCATTATTTCCA	-29	True	NA	NA	False	NA	NA	NA	95157420	95089246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95140658_95140760_95141682_95141749_95157229
transcript_54344.known	chr14	-	10384	27	FSM	ENSG00000100697.15	ENST00000343455.8	10384	27	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_26	18.2861864636839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCCTTTCATCTTT	-4	True	NA	-5	True	AATAAA	-16	NA	95157529	95086227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95157229
transcript_54349.known	chr14	+	723	4	FSM	ENSG00000235706.9	ENST00000435343.2	817	4	83	11	75	0	multi-exon	FALSE	canonical	3	11	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	80	False	NA	3	True	AATAAA	-15	NA	95157759	95179925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503
transcript_5435.nnic	chr1	+	3612	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-204	3	at_least_one_novel_splicesite	FALSE	canonical	3	168	junction_4	1082.82801035067	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	NA	False	NA	31	True	AATAAA	-23	NA	26410612	26429722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428577_26429137
transcript_54352.known	chr14	+	1709	3	FSM	ENSG00000235706.9	ENST00000554631.2	1709	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	-35	True	NA	11	True	AATAAA	-23	NA	95157644	95179933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95159036_95179498_95179634_95179750
transcript_54353.known	chr14	+	650	2	FSM	ENSG00000235706.9	ENST00000661445.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTTTGGGCTGTCAC	1139	False	NA	9	True	AATAAA	-21	NA	95158818	95179931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95159036_95179498
transcript_54354.known	chr14	-	12749	13	FSM	ENSG00000165959.12	ENST00000298912.9	12749	13	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_12	3.749073959734	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTCGTTGATGATACTT	-17	True	NA	-1	True	TATAAA	-14	NA	95319908	95181939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95191733_95193848_95193920_95194535_95194597_95196497_95196695_95202837_95204464_95209394_95209478_95210685_95210880_95213218_95213410_95215640_95215734_95221690_95221775_95223759_95223856_95230071_95230134_95319710
transcript_54357.known	chr14	+	1103	2	FSM	ENSG00000182512.5	ENST00000331334.5	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTCGAGCCCTGGTCT	8	True	NA	14	True	ATTAAA	-14	NA	95535049	95544714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95535385_95543946
transcript_54359.known	chr14	-	981	2	FSM	ENSG00000247092.8	ENST00000554169.2	1375	2	394	0	-10	0	multi-exon	FALSE	canonical	3	99	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAGGATCAGTAACAAA	3	True	NA	NA	False	NA	NA	NA	95534245	95532633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95533062_95533692
transcript_5436.known	chr1	+	3458	5	FSM	ENSG00000131914.11	ENST00000254231.4	3458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1155.30104301866	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	0	True	NA	28	True	AATAAA	-20	NA	26410816	26429719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428588_26429095
transcript_54360.known	chr14	-	428	2	FSM	ENSG00000247092.8	ENST00000553559.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	NA	False	NA	-36	True	ATTAAA	-14	NA	95534872	95532913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95533062_95534592
transcript_54362.known	chr14	+	1142	4	FSM	ENSG00000213231.13	ENST00000340722.8	1142	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	6.64997911442	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	-1	True	NA	11	True	ATTAAA	-18	NA	95686425	95692628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95686630_95690735_95690907_95691267_95691337_95691930
transcript_54363.known	chr14	+	1724	3	FSM	ENSG00000213231.13	ENST00000464815.5	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	11	False	NA	11	True	ATTAAA	-18	NA	95686437	95692628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95686630_95690735_95690907_95691267
transcript_54365.known	chr14	+	3373	3	FSM	ENSG00000250366.4	ENST00000678517.1	3373	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	150	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGTGATGCTGTTAAA	25	False	NA	2	True	ATTAAA	-9	NA	95876429	95925663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95876602_95876859_95877178_95922780
transcript_54367.known	chr14	+	3197	2	FSM	ENSG00000250366.4	ENST00000503525.2	3197	2	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGTCTTTTCTTTCAA	1	True	NA	24	True	AATAAA	-27	NA	95876771	95925571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95877178_95922780
transcript_54368.known	chr14	+	774	3	FSM	ENSG00000227051.7	ENST00000556728.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	41.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTCTGTGTCTGGTTC	15	True	NA	11	True	AAGAAA	-6	NA	96039371	96093887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96039528_96086510_96086763_96093521
transcript_54369.known	chr14	+	7627	2	FSM	ENSG00000227051.7	ENST00000555004.3	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCTGATGCTTTTCC	5	True	NA	95	True	TTTAAA	-21	NA	96039361	96093971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96039528_96086510
transcript_54370.known	chr14	+	3996	3	FSM	ENSG00000168398.7	ENST00000554311.2	3996	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTAGCATTTGTTACA	-3	True	NA	NA	False	AATAAA	-18	NA	96204838	96244164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96204960_96237068_96237182_96240402
transcript_54372.known	chr14	+	760	4	FSM	ENSG00000100744.15	ENST00000554182.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	184.186499686233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTTCATATAATATCT	1	True	NA	NA	False	NA	NA	NA	96363525	96385912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96363569_96379687_96379756_96382246_96382506_96385522
transcript_54373.known	chr14	+	2169	4	FSM	ENSG00000100744.15	ENST00000555181.6	2169	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	56.2217830461547	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGTTTCCATTTTTTA	1	True	NA	26	True	GATAAA	-14	NA	96363525	96387288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96363569_96379687_96379789_96382246_96382506_96385522
transcript_54375.nnic	chr14	+	2502	4	NNC	ENSG00000100744.15	novel	2169	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	193.71686096523	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGTTTCCATTTTTTA	-7	True	NA	26	True	GATAAA	-14	NA	96363549	96387288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_96363926_96379687_96379789_96382246_96382506_96385522
transcript_54377.known	chr14	+	2140	3	FSM	ENSG00000100744.15	ENST00000438650.5	2140	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	212.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTGTTTCCATTTTT	NA	False	NA	24	True	GATAAA	-12	NA	96363451	96387286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96363569_96382246_96382506_96385522
transcript_54380.known	chr14	+	3283	18	FSM	ENSG00000140057.9	ENST00000267584.9	3283	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	7.27797074269249	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTCTGGCTTCTTTC	-9	True	NA	16	True	AATAAA	-19	NA	96392127	96489427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96392260_96398074_96398264_96404756_96404866_96408846_96408942_96420821_96420933_96437834_96437916_96442729_96442819_96446516_96446608_96449801_96449880_96451420_96451571_96456346_96456476_96458082_96458213_96471477_96471607_96472686_96472756_96478464_96478663_96482998_96483220_96486897_96487057_96488304
transcript_54381.known	chr14	+	4515	22	FSM	ENSG00000090060.19	ENST00000216277.13	4515	22	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_21	456.193881088794	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCTGATTTCTTTTG	-29	True	NA	17	True	AATAAA	-21	NA	96502381	96567116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_54383.known	chr14	+	2588	21	FSM	ENSG00000090060.19	ENST00000392990.6	2588	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_19	554.294154759005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCATTAGAAAGTAGAA	-8	True	NA	NA	False	AATACA	-45	NA	96502557	96565428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96562818_96562894_96564954
transcript_54390.known	chr14	+	2173	12	FSM	ENSG00000090060.19	ENST00000618976.2	2173	12	0	0	0	0	multi-exon	TRUE	canonical	3	1207	junction_11	375.925876287879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTCTCTGTGTTTT	-35	True	NA	5	True	ATTAAA	-18	NA	96502375	96537901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975
transcript_54396.known	chr14	+	3264	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	0	0	0	0	multi-exon	FALSE	canonical	3	1962	junction_7	93.3109720236586	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	-10	True	NA	8	True	AATAAA	-9	NA	96502400	96534885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
transcript_54399.known	chr14	+	1421	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2070	junction_3	74.1681647788771	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAATGTTGTTTTTTT	30	True	NA	NA	False	ATTAAA	-8	NA	96502440	96532248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
transcript_54400.known	chr14	-	1512	1	FSM	ENSG00000260806.1	ENST00000569214.1	1512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTAGTTC	456	False	NA	NA	False	AAAAAG	-39	NA	96502321	96500809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_96500800_96502300
transcript_54401.known	chr14	+	1379	4	FSM	ENSG00000258702.4	ENST00000667340.2	1641	4	0	262	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCCAGTGCAGCGGTGT	NA	False	NA	NA	False	NA	NA	NA	96592755	96595763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96592816_96593120_96593250_96593489_96593580_96594663
transcript_54402.known	chr14	+	1816	14	FSM	ENSG00000100749.9	ENST00000553683.2	1816	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	322.458694203545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGGCTGTAAGGTT	NA	False	NA	33	True	AATAAA	-30	NA	96797303	96881612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96877501_96877574_96881176
transcript_54404.known	chr14	+	1444	13	FSM	ENSG00000100749.9	ENST00000679903.1	1444	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	258.052912317524	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCAGGTTATACTCC	4	True	NA	38	True	ATTAAA	-21	NA	96797387	96881405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876038_96876121_96881176
transcript_54406.known	chr14	+	1435	13	FSM	ENSG00000100749.9	ENST00000680538.1	1435	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	258.018033392156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTTCAGGTTATACT	NA	False	NA	36	True	ATTAAA	-19	NA	96797313	96881403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860646_96860736_96876029_96876121_96881176
transcript_54407.known	chr14	+	1823	12	FSM	ENSG00000100749.9	ENST00000681419.1	1823	12	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_10	84.2273585830892	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAAGGAATTAAAGCT	8	True	NA	NA	False	TATAAA	-35	NA	96797391	96876723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029
transcript_54408.known	chr14	+	5188	12	FSM	ENSG00000100749.9	ENST00000680335.1	5188	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	268.513846850424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTAAAGTTCTTGGTAT	-4	True	NA	NA	False	AATAAA	-18	NA	96797379	96935377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96931330
transcript_54409.known	chr14	+	6456	12	FSM	ENSG00000100749.9	ENST00000681524.1	6456	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	267.667982322	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTTTGTGATGCCTGC	-37	True	NA	NA	False	AATAAA	-24	NA	96797346	96886488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_54410.known	chr14	+	1070	11	FSM	ENSG00000100749.9	ENST00000680348.1	1070	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	354.480535431778	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACCTCAGTGTTGTGGA	11	True	NA	NA	False	ACTAAA	-29	NA	96797394	96860681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852836_96852944_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_54412.known	chr14	+	1202	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	289.800101389617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTAGCAAGTTACTA	1	True	NA	NA	False	AATAAA	-18	NA	96797384	96860922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
transcript_54413.nic	chr14	+	471	5	ISM	ENSG00000100749.9	ENST00000555351.2	968	6	16	5967	0	-5967	5prime_fragment	FALSE	canonical	3	886	junction_1	39.9374510954317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAAAGGTAAAAATATG	-37	True	NA	NA	False	NA	NA	NA	96797346	96847335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256
transcript_54414.known	chr14	+	1869	14	FSM	ENSG00000100749.9	ENST00000681778.1	1869	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	383.021311996848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTCATTTCAAAATAAT	28	True	NA	NA	False	AAAAAG	-15	NA	96797411	96945418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96931330_96931557_96943516_96943681_96945048
transcript_54415.known	chr14	+	1130	11	FSM	ENSG00000100749.9	ENST00000680509.1	1130	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	281.446193791993	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTTGTTATTAAATT	-7	True	NA	NA	False	AAAACA	-10	NA	96797376	96860735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797434_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_54416.known	chr14	-	2856	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	29.3300187521249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTATTCCTTTT	4	True	NA	-6	True	ATTAAA	-17	NA	99480859	99397747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_5442.known	chr1	+	3975	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	111.804392678563	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	0	True	NA	37	True	AATAAA	-29	NA	26410816	26429728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
transcript_54423.known	chr14	-	1330	9	FSM	ENSG00000183576.13	ENST00000329331.7	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	110.726013203763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATCTTTTTTCTTTGT	3	True	NA	-1	True	AATAAA	-18	NA	99480788	99409803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_99410216_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_54426.known	chr14	-	16564	6	FSM	ENSG00000205476.9	ENST00000380243.9	16564	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	9.2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACTGAATAAATGATCAT	-10	True	NA	NA	False	AATAAA	-15	NA	99604207	99500189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_99515336_99516187_99516287_99517087_99517184_99522132_99522241_99536014_99536089_99603166
transcript_54428.known	chr14	-	930	5	FSM	ENSG00000205476.9	ENST00000555822.5	930	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.4831958884068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGCACTGGCCCAAGCCG	NA	False	NA	NA	False	NA	NA	NA	99522945	99515086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_99515336_99516187_99516287_99517087_99517184_99522132_99522241_99522567
transcript_54433.known	chr14	+	955	7	FSM	ENSG00000090061.17	ENST00000557165.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.3917535302941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCAGGCATGCTAAGCGT	0	True	NA	NA	False	NA	NA	NA	99481168	99502376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99481243_99481337_99481480_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99502206
transcript_54434.known	chr14	+	936	7	FSM	ENSG00000090061.17	ENST00000557441.5	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.93725393319377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCATGTATAGGAGATG	-5	True	NA	NA	False	AATACA	-14	NA	99481411	99502312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99481615_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99501355_99501414_99502206
transcript_54435.known	chr14	+	2241	8	FSM	ENSG00000182218.10	ENST00000357223.2	2241	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	11.4481974340852	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTCTCAGCCCTTAGA	11	False	NA	NA	False	AATAAA	-20	NA	99645142	99669277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99645463_99652223_99652871_99656999_99657144_99659427_99659757_99660279_99660407_99662875_99663022_99668221_99668304_99668831
transcript_54438.known	chr14	+	4064	23	FSM	ENSG00000066629.18	ENST00000334192.8	4064	23	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	44.5790226025465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTATTGACCTATATT	4	True	NA	18	True	AATAAA	-14	NA	99793342	99941537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99793544_99850852_99851036_99865513_99865647_99874930_99874988_99878484_99878620_99891198_99891228_99894628_99894759_99897144_99897295_99898232_99898303_99900928_99901040_99907637_99907734_99909344_99909480_99910241_99910342_99911421_99911577_99914178_99914305_99914565_99914698_99917781_99917850_99920788_99920878_99936028_99936127_99936246_99936335_99937816_99937913_99939196_99939328_99939986
transcript_54441.known	chr14	+	4460	22	FSM	ENSG00000066629.18	ENST00000262233.11	4460	22	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_13	15.0097473998333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCATTTCATTTTAAT	14	True	NA	13	True	AATGAA	-25	NA	99793412	99942060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99793544_99850852_99851036_99865513_99865647_99878484_99878620_99891198_99891228_99894628_99894759_99897144_99897295_99898232_99898303_99900928_99901040_99907637_99907734_99909344_99909480_99910241_99910342_99911421_99911577_99914178_99914305_99914565_99914698_99917781_99917850_99920788_99920878_99936028_99936127_99936246_99936335_99937816_99937913_99939196_99939328_99939986
transcript_54449.known	chr14	+	1547	3	FSM	ENSG00000196405.13	ENST00000555848.1	1547	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	14	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGCTCAGGCCCTC	NA	False	NA	12	True	AATAAA	-16	NA	100140292	100144235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100141247_100141735_100141794_100143700
transcript_54450.known	chr14	-	3834	3	FSM	ENSG00000168350.8	ENST00000305631.7	3834	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACCTGGTGTTCCGTGT	-8	True	NA	NA	False	TATAAA	-16	NA	100159645	100143956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100146908_100148967_100149711_100159505
transcript_54463.known	chr14	-	1025	5	FSM	ENSG00000197119.13	ENST00000556715.6	1025	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	229.091002660515	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCCGCGCTACCGCGGC	17	False	NA	NA	False	NA	NA	NA	100306515	100292524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100295625_100295698_100298841_100298886_100306198
transcript_54465.known	chr14	-	1067	5	FSM	ENSG00000197119.13	ENST00000556868.1	1067	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	237.882323849419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCAGATCTACGGGCACGA	15	False	NA	NA	False	NA	NA	NA	100306517	100292780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100295625_100295994_100298841_100298886_100306198
transcript_5447.known	chr1	+	3338	9	FSM	ENSG00000117682.17	ENST00000434391.6	3338	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	68.9814286601836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	4207	False	NA	9	True	AATAGA	-15	NA	26432281	26471294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442707_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_54470.known	chr14	-	2291	4	FSM	ENSG00000197119.13	ENST00000359232.8	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	147.271480229163	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGAGGCTGCCTTTGCA	-3	True	NA	-19	True	AATAAA	-19	NA	100306444	100291115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100298841_100298886_100306198
transcript_54475.known	chr14	-	674	3	FSM	ENSG00000197119.13	ENST00000554060.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	331.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCACGTTGCTGCGT	42	False	NA	NA	False	NA	NA	NA	100306490	100292734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100306198
transcript_54477.known	chr14	-	331	2	FSM	ENSG00000258982.1	ENST00000554537.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTAACACTCACTGCA	1474	False	NA	NA	False	NA	NA	NA	100238555	100207406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100207653_100238470
transcript_54478.known	chr14	-	534	2	FSM	ENSG00000197119.13	ENST00000557438.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCACCCAGAGCAAGGGC	-3	True	NA	NA	False	NA	NA	NA	100306444	100298597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100298886_100306198
transcript_5448.known	chr1	+	3245	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	59.4637494613315	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	27	True	NA	9	True	AATAGA	-15	NA	26432354	26471294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
transcript_54480.known	chr14	-	1050	2	FSM	ENSG00000197119.13	ENST00000556844.1	1050	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATCAGCTCCAGCGGGT	108	False	NA	NA	False	NA	NA	NA	100306424	100304952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100305777_100306198
transcript_54483.known	chr14	+	6534	5	FSM	ENSG00000100811.14	ENST00000262238.10	6534	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	30.0613955098562	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTGTGGTTCTTGT	-13	True	NA	19	True	AATAAA	-19	NA	100239143	100282788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
transcript_54485.known	chr14	+	1923	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	31.5700279801375	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	30	True	NA	32	True	AATAAA	-36	NA	100376484	100530303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_54487.known	chr14	+	2123	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	37.9956137819442	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	39	True	NA	32	True	AATAAA	-36	NA	100376493	100530303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_54489.known	chr14	+	705	6	FSM	ENSG00000176473.14	ENST00000555775.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	40.4049501917772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGACTTGCTGGTGAC	-37	True	NA	NA	False	NA	NA	NA	100376417	100529855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100376496_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_54505.known	chr14	-	3092	11	FSM	ENSG00000140105.18	ENST00000355338.6	3092	11	0	0	0	0	multi-exon	FALSE	canonical	3	752	junction_10	201.354513234742	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAATAAACTTCCTT	NA	False	NA	-38	True	NA	NA	NA	100376805	100333817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100376259
transcript_54516.known	chr14	-	2690	10	FSM	ENSG00000140105.18	ENST00000344102.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_9	384.085381454324	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACCCAGTAGAGTAAAT	4	True	NA	-48	True	NA	NA	NA	100375608	100333827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100375282
transcript_54518.known	chr14	-	2466	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_9	330.498090243077	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTCCTGCTCTTGTC	-23	True	NA	-22	True	AATAAA	-4	NA	100376335	100333801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
transcript_5452.nic	chr1	+	3271	9	NIC	ENSG00000117682.17	novel	3338	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	67.3478609534111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	-19	True	NA	9	True	AATAGA	-15	NA	26432364	26471294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26432416_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_54530.known	chr14	-	573	4	FSM	ENSG00000140105.18	ENST00000555063.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	469.689495541706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTGCTTATAAACCAT	-31	True	NA	NA	False	NA	NA	NA	100376343	100354400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100354567_100360553_100360663_100361707_100361922_100376259
transcript_54531.known	chr14	-	2639	11	FSM	ENSG00000140105.18	ENST00000392882.7	2639	11	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_10	275.829657578731	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCATTGTGCTCTGT	-1	True	NA	-10	True	AATAAA	-16	NA	100375347	100333789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282
transcript_54532.known	chr14	-	2666	7	FSM	ENSG00000183092.18	ENST00000553553.6	2666	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	4.7404875511093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTGGGCTGTTTCTC	-5	True	NA	0	True	AATAAA	-19	NA	100568491	100537146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910_100567940_100568444
transcript_54533.known	chr14	-	2784	7	FSM	ENSG00000183092.18	ENST00000554140.3	2788	7	4	0	4	0	multi-exon	FALSE	canonical	3	7	junction_3	3.19722101554181	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTGGGCTGTTTCTC	3	True	NA	0	True	AATAAA	-19	NA	100587413	100537146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910_100567940_100587248
transcript_54534.known	chr14	-	2744	6	FSM	ENSG00000183092.18	ENST00000557378.6	2750	6	0	6	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.31058907144937	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATCTGGGTTGGGCTG	1809	False	NA	-6	True	AATAAA	-13	NA	100568070	100537152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910
transcript_54535.known	chr14	+	4657	5	FSM	ENSG00000185559.16	ENST00000341267.9	4657	5	0	0	0	0	multi-exon	TRUE	canonical	3	262	junction_3	10.1087833095779	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCTGCGTCTTTGAT	12	True	NA	5	True	AATAAA	-15	NA	100726891	100738224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100727136_100728395_100728460_100728935_100729067_100732041_100732184_100734148
transcript_5454.nic	chr1	+	1306	9	NIC	ENSG00000117682.17	novel	3288	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	60.3032700191291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGTGTTCCCTTTGCT	-19	True	NA	15	True	NA	NA	NA	26432364	26469226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_5455.nic	chr1	+	3374	9	NIC	ENSG00000117682.17	novel	3338	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	60.3032700191291	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	-19	True	NA	9	True	AATAGA	-15	NA	26432364	26471294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_54550.known	chr14	-	588	4	FSM	ENSG00000230805.8	ENST00000448840.6	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	3.68178700572909	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTGGCTGCACCAAAG	NA	False	NA	NA	False	NA	NA	NA	101077671	101073895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_101074130_101074480_101074562_101076533_101076707_101077571
transcript_54555.nnic	chr14	+	1092	3	Antisense	novelGene_ENSG00000258460.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTAAGACTCTTCTCCA	NA	False	NA	NA	False	NA	NA	NA	101305010	101360244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr14_+_101305061_101356189_101356441_101359453
transcript_54557.known	chr14	-	1937	3	FSM	ENSG00000258498.9	ENST00000557661.1	1937	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGAGTGCGGTGTGTA	-44	True	NA	NA	False	AATAAA	-15	NA	101560431	101557303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_101558835_101559799_101560026_101560251
transcript_54558.known	chr14	-	3108	1	FSM	ENSG00000258498.9	ENST00000554735.1	3108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGAGTGCGGTGTGTA	-24	True	NA	NA	False	AATAAA	-15	NA	101560411	101557303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_101557300_101560400
transcript_54559.known	chr14	+	2102	1	FSM	ENSG00000197406.7	ENST00000510508.4	2102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGCCTTTGGTCCCT	NA	False	NA	26	True	AATAAA	-20	NA	101561350	101563452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101561400_101563500
transcript_54560.known	chr14	+	4328	14	FSM	ENSG00000078304.19	ENST00000334743.9	4328	14	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_13	131.617654973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTCATCATGAAACTAAA	12	False	NA	20	True	AATAAA	-17	NA	101809894	101927977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101917830_101917948_101925140
transcript_54562.known	chr14	+	3845	13	FSM	ENSG00000078304.19	ENST00000350249.7	3845	13	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_12	98.0281634701647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTGCGTTTGGCATC	-16	True	NA	NA	False	AATAAA	-22	NA	101809802	101927519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101925140
transcript_54564.known	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	27.9766726912982	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	12	False	NA	20	True	AATAAA	-22	NA	101809894	101912625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
transcript_54566.known	chr14	+	735	2	FSM	ENSG00000078304.19	ENST00000556946.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTTTAAATCCTAAG	16	True	NA	NA	False	ATTAAA	-19	NA	101809834	101836701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101836168
transcript_54567.known	chr14	+	1079	1	FSM	ENSG00000271780.1	ENST00000607414.1	1079	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTTGAATAAGTGAT	-3	True	NA	83	True	ATTAAA	-36	NA	101948346	101949425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101948300_101949400
transcript_54570.nic	chr14	+	2769	8	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-113	17921	-113	-2843	5prime_fragment	FALSE	canonical	3	94	junction_4	15.2823761375044	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCTCTCATGTAATCC	NA	False	NA	NA	False	AAGAAA	-2	NA	101964459	101986762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686
transcript_54572.nic	chr14	+	1556	7	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-113	21211	-113	-6133	5prime_fragment	FALSE	canonical	3	94	junction_4	16.303544263612	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAATCTGAAGATG	NA	False	NA	NA	False	AAGAAA	-3	NA	101964459	101983472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381
transcript_54579.known	chr14	-	3228	11	FSM	ENSG00000080824.19	ENST00000216281.13	3228	11	0	0	0	0	multi-exon	FALSE	canonical	3	2377	junction_7	348.424468141949	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTGTCTCAAAGTTC	-1	True	NA	-5	True	AATACA	-19	NA	102087044	102080741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_54581.known	chr14	-	1539	11	FSM	ENSG00000080823.23	ENST00000524214.5	1539	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	22.2227361051694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCACCCGCGGCCCGCGCA	0	True	NA	-78	True	GGGGCT	-23	NA	102305185	102229136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102229367_102229456_102229658_102231706_102231822_102232534_102232709_102233687_102233790_102250811_102250991_102251755_102251805_102251916_102251996_102263545_102263617_102283477_102283593_102304961
transcript_54589.nic	chr14	-	1891	9	ISM	ENSG00000080824.19	ENST00000216281.13	3228	11	-156	2371	-156	329	5prime_fragment	FALSE	canonical	3	2377	junction_5	312.007912559922	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGCAGGAAGAGAAAAAAA	379	False	NA	-5	True	NA	NA	NA	102087200	102083112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_5460.known	chr1	+	1235	8	FSM	ENSG00000117682.17	ENST00000525682.6	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	69.9994169071924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	11	True	NA	2	True	ACTAAA	-18	NA	26432338	26469373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26457790_26457906_26460036_26460145_26468894
transcript_54610.nic	chr14	-	1362	5	ISM	ENSG00000080824.19	ENST00000216281.13	3228	11	-497	4114	-497	77	5prime_fragment	FALSE	canonical	3	2377	junction_1	238.99006255491	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATGGTGACAAGAAGA	38	False	NA	-56	True	AAGAAA	-2	NA	102087541	102084855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_54613.nic	chr14	-	1041	5	ISM	ENSG00000080824.19	ENST00000216281.13	3228	11	-253	4191	-253	0	5prime_fragment	FALSE	canonical	3	2377	junction_1	238.99006255491	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAGAAGAGAA	282	False	NA	-133	True	AAGAAA	-18	NA	102087297	102084932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_54638.known	chr14	+	2067	4	FSM	ENSG00000140153.18	ENST00000454394.2	2067	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	59.1739432145227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGCGCTCCTGTATTAG	14	True	NA	-96	True	NA	NA	NA	102139913	102210134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102194937_102195121_102197754_102197848_102208602
transcript_54641.known	chr14	+	2616	4	FSM	ENSG00000140153.18	ENST00000335263.9	2616	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	41.1204193666467	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGTTTATCTTCTGTT	420	False	NA	NA	False	ATTAAA	-16	NA	102139843	102223673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102194937_102195121_102208602_102209863_102222829
transcript_54656.known	chr14	+	491	3	FSM	ENSG00000140153.18	ENST00000557485.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	57	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACATGTACTTATATAA	79	False	NA	NA	False	NA	NA	NA	102139502	102208683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102139730_102194937_102195121_102208602
transcript_54659.known	chr14	+	785	3	FSM	ENSG00000140153.18	ENST00000556094.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACGCTGCAATCACAG	15	True	NA	NA	False	NA	NA	NA	102139914	102223358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102139988_102194937_102195121_102222829
transcript_5466.known	chr1	+	868	7	FSM	ENSG00000117682.17	ENST00000427245.6	868	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	83.8121245538032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTCCCTCTCATGTT	-12	True	NA	NA	False	ATTAAA	-29	NA	26432315	26448565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26448355
transcript_54660.known	chr14	+	2198	3	FSM	ENSG00000140153.18	ENST00000299135.6	2198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTGTAGCACTTTG	11	True	NA	16	True	AATAAA	-16	NA	102139910	102210525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102193462_102193476_102208602
transcript_54661.known	chr14	+	2384	3	FSM	ENSG00000140153.18	ENST00000342702.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	12.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTAGCACTTTGAT	-3	True	NA	18	True	AATAAA	-18	NA	102139896	102210527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102194937_102195121_102208602
transcript_54666.known	chr14	+	2382	3	FSM	ENSG00000140153.18	ENST00000556807.1	2382	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTGTTTATCTTCTG	-7	True	NA	NA	False	ATTAAA	-14	NA	102139892	102223671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102208602_102209863_102222829
transcript_54672.known	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	1169.78661612823	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-11	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
transcript_54673.known	chr14	-	2736	9	FSM	ENSG00000080823.23	ENST00000521766.5	2736	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	18.0416185526687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTCCGAGTCCAACA	-17	True	NA	-6	True	ATTAAA	-31	NA	102305168	102228826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102229363_102229456_102229658_102231706_102231822_102232534_102233790_102250811_102250991_102251755_102251805_102251916_102251996_102283477_102283593_102304961
transcript_54675.known	chr14	+	2971	8	FSM	ENSG00000022976.16	ENST00000558850.5	2971	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	14.7135922166671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGCTGTCTACATTTT	NA	False	NA	3	True	TATAAA	-15	NA	102317376	102342364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102317667_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102341322
transcript_54677.known	chr14	-	4270	6	FSM	ENSG00000100865.15	ENST00000559514.5	4270	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	175.419041155742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACAGTGTGCTTTTTTTT	NA	False	NA	2	True	ATTAAA	-20	NA	102362916	102341101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102344390_102348278_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_54679.known	chr14	-	953	5	FSM	ENSG00000100865.15	ENST00000216756.11	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_4	40.1707293934277	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTGATCTAGTTTC	-9	True	NA	-2	True	AGTAAA	-23	NA	102362890	102348281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_5468.known	chr1	+	582	6	FSM	ENSG00000117682.17	ENST00000533087.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	83.4299706340593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAGATGGCCTGGGGGG	-18	True	NA	NA	False	NA	NA	NA	26432365	26447615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432396_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558
transcript_54680.known	chr14	-	572	4	FSM	ENSG00000100865.15	ENST00000541568.6	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	212.540715053741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGTCTGCCTAGGAC	13	True	NA	NA	False	NA	NA	NA	102362868	102348510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102348760_102355767_102355898_102359418_102359588_102362844
transcript_54681.known	chr14	+	2992	8	FSM	ENSG00000022976.16	ENST00000442396.7	2992	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	6.60859057498307	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTACATTTTTCT	-5	True	NA	6	True	TATAAA	-18	NA	102319745	102342367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102320054_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102341322
transcript_54682.known	chr14	+	8704	20	FSM	ENSG00000196663.16	ENST00000359520.12	8704	20	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	12.0147646933729	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTCTCTAACTACT	-5	True	NA	12	True	AATAAA	-21	NA	102362940	102502477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102363117_102376649_102376941_102407337_102407467_102408487_102408620_102414635_102414794_102424978_102425292_102428249_102428383_102431795_102432129_102434234_102435212_102438021_102438206_102440435_102440610_102443646_102443828_102445805_102445948_102449628_102449870_102450559_102450650_102452393_102452628_102465140_102465290_102496978_102497121_102497569_102497720_102498102
transcript_54684.known	chr14	-	6705	4	FSM	ENSG00000156381.9	ENST00000286918.9	6705	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	62.1986066296237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGAATTTGCGAGTC	-1	True	NA	-8	True	AATAAA	-15	NA	102509776	102501766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102507943_102508474_102508550_102508640_102508847_102509528
transcript_54687.known	chr14	-	1413	3	FSM	ENSG00000156381.9	ENST00000560748.5	1413	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	59.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTATATATATTGATC	11	True	NA	-34	True	NA	NA	NA	102509799	102506875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102507943_102508474_102508550_102509528
transcript_54689.known	chr14	+	1603	3	FSM	ENSG00000259230.1	ENST00000559946.1	1603	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCGGTGGCTCACGCCTG	19	False	NA	NA	False	AATAAA	-17	NA	102545253	102555826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102545577_102550345_102550509_102554709
transcript_5469.known	chr1	+	705	6	FSM	ENSG00000117682.17	ENST00000436153.6	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	75.5687766210358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGCCTGTTGGATCCCA	6	True	NA	NA	False	NA	NA	NA	26432389	26447639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558
transcript_54690.known	chr14	+	7806	12	FSM	ENSG00000131323.16	ENST00000392745.8	7806	12	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_10	6.58322436008424	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGATCACACCGTCTC	4	True	NA	15	True	AATAAA	-19	NA	102777448	102911500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102777676_102830333_102830473_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102886188_102886270_102889559_102889635_102891324_102891418_102897260_102897402_102903254_102903430_102905212
transcript_54692.known	chr14	-	6844	37	FSM	ENSG00000198752.11	ENST00000361246.7	6844	37	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	6.48621520259088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCCGTTTGGATG	-6	True	NA	-1	True	AATAAA	-25	NA	103057549	102932379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102933844_102938103_102938175_102938305_102938412_102939609_102939728_102939829_102939948_102940045_102940131_102940226_102940325_102943890_102944488_102945661_102945725_102946467_102946685_102947720_102947803_102949764_102949905_102950465_102950603_102952497_102952604_102954197_102954276_102954601_102954689_102959630_102959711_102963060_102963156_102964501_102964651_102966281_102966388_102967045_102967171_102968252_102968359_102968471_102968717_102970150_102970262_102971918_102972162_102974015_102974150_102975683_102975804_102975882_102976050_102978125_102978206_102980772_102981022_102983555_102983757_102986486_102986581_102999564_102999714_103003927_103004024_103008471_103008556_103012096_103012189_103056998
transcript_54698.known	chr14	+	1550	12	FSM	ENSG00000166126.11	ENST00000299155.10	1550	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.12210329045623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCAGCCTGGCTAT	-1	True	NA	4	True	AGTAAA	-14	NA	102922662	102930842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102922732_102923710_102923830_102923934_102923980_102928425_102928514_102928757_102928976_102929120_102929259_102929427_102929537_102929654_102929738_102929923_102930087_102930164_102930328_102930405_102930494_102930575
transcript_5470.known	chr1	+	717	3	FSM	ENSG00000117682.17	ENST00000487944.5	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	69.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGACATTAACAAAGAAGT	17	True	NA	NA	False	AAGAAA	-6	NA	26432344	26438734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167
transcript_54701.known	chr14	+	2269	11	FSM	ENSG00000166126.11	ENST00000541086.5	2269	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	4.00499687890016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGTCAGCCTGGCTA	-1	True	NA	3	True	AGTAAA	-13	NA	102922921	102930841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102923830_102923934_102923980_102928425_102928514_102928757_102928976_102929120_102929259_102929427_102929537_102929654_102929738_102929923_102930087_102930164_102930328_102930405_102930494_102930575
transcript_54703.nic	chr14	+	1801	9	ISM	ENSG00000166126.11	ENST00000541086.5	2269	11	5020	-1	-703	0	3prime_fragment	FALSE	canonical	2	2	junction_1	3.903123748999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCAGCCTGGCTAT	4861	False	NA	4	True	AGTAAA	-14	NA	102927941	102930842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_102928514_102928757_102928976_102929120_102929259_102929427_102929537_102929654_102929738_102929923_102930087_102930164_102930328_102930405_102930494_102930575
transcript_54705.nic	chr14	+	1366	8	ISM	ENSG00000166126.11	ENST00000541086.5	2269	11	5699	-1	-24	0	3prime_fragment	FALSE	canonical	2	5	junction_1	3.28260722659316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCAGCCTGGCTAT	663	False	NA	4	True	AGTAAA	-14	NA	102928620	102930842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_102928976_102929120_102929259_102929427_102929537_102929654_102929738_102929923_102930087_102930164_102930328_102930405_102930494_102930575
transcript_54707.nic	chr14	+	1502	7	NIC	ENSG00000166126.11	novel	1550	12	NA	NA	-15	0	intron_retention	FALSE	canonical	2	6	junction_3	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCAGCCTGGCTAT	-26	True	NA	4	True	AGTAAA	-14	NA	102928629	102930842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_102929259_102929427_102929537_102929654_102929738_102929923_102930087_102930164_102930328_102930405_102930494_102930575
transcript_54721.nic	chr14	+	3753	11	NIC	ENSG00000185215.11	novel	4683	12	NA	NA	-144	0	intron_retention	TRUE	canonical	0	0	junction_2	25.6678787592586	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGAGTGATTTATTTT	91	False	NA	17	True	TATAAA	-17	NA	103123297	103137439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_103123484_103126309_103126693_103129739_103129855_103130001_103130125_103130314_103130416_103131051_103131151_103131638_103131763_103132749_103132873_103133361_103133518_103133681_103133804_103135218
transcript_54725.nic	chr14	-	1943	2	ISM	ENSG00000251533.2	ENST00000514902.2	1558	3	-241	0	-241	0	intron_retention	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTTTTATTCAT	NA	False	NA	-5	True	AATAAA	-13	NA	103189269	103187220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_103188271_103188376
transcript_54727.known	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_1	242.614274003846	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	25	True	NA	9	True	AATAAA	-22	NA	103334236	103345025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_54739.nic	chr14	+	1131	7	ISM	ENSG00000100664.11	ENST00000216554.8	5710	12	-229	6677	-181	0	5prime_fragment	FALSE	canonical	3	1777	junction_1	303.847915173949	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103334007	103338348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_5475.known	chr1	+	1148	7	FSM	ENSG00000198830.11	ENST00000619352.4	1148	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4362.60108447039	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTT	9	False	NA	NA	False	AATAAA	-22	NA	26472514	26475970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26472563_26472607_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_54752.known	chr14	+	580	4	FSM	ENSG00000100664.11	ENST00000560338.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1207.51820782223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAGAATCCTGAAACAGA	-20	True	NA	NA	False	ATTAAA	-22	NA	103334191	103336825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676
transcript_54754.known	chr14	+	3481	18	FSM	ENSG00000075413.19	ENST00000429436.7	3481	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	208.765261133301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	9	True	NA	11	True	ATTAAA	-23	NA	103385414	103503831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
transcript_54759.known	chr14	+	2969	17	FSM	ENSG00000075413.19	ENST00000416682.6	2969	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_6	198.231517108153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGGAGCGAAAGCTG	47	False	NA	25	True	ATTAAA	-17	NA	103385452	103503360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103458726_103458796_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_54762.known	chr14	+	2968	17	FSM	ENSG00000075413.19	ENST00000676938.1	2968	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	187.138140403687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGTCTGAGGACGAG	-17	True	NA	2	True	NA	NA	NA	103385388	103503337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
transcript_54774.known	chr14	+	3283	16	FSM	ENSG00000075413.19	ENST00000303622.13	3283	16	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	76.1167524267818	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	30	False	NA	11	True	ATTAAA	-23	NA	103385540	103503831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_54775.known	chr14	+	2911	16	FSM	ENSG00000075413.19	ENST00000216288.11	2911	16	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_11	115.772881107797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTTGCATTGTCTCC	349	False	NA	6	True	ATTAAA	-18	NA	103385859	103503826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468080_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_54778.known	chr14	+	2643	16	FSM	ENSG00000075413.19	ENST00000440884.7	2643	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	226.731814167213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATTAAAGTGTTTTCC	-14	True	NA	-15	True	NA	NA	NA	103385391	103503252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
transcript_54780.known	chr14	+	3379	16	FSM	ENSG00000075413.19	ENST00000677432.1	3379	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	224.611031687127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAATCTTGCATT	19	True	NA	0	True	ATTAAA	-12	NA	103385424	103503820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103500155_103500201_103502881
transcript_54783.known	chr14	+	2625	15	FSM	ENSG00000075413.19	ENST00000560417.6	2625	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_14	153.961713369505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGTATAGAATAATA	-14	True	NA	15	True	ATTAAA	-20	NA	103385391	103503282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103502881
transcript_54787.known	chr14	+	3286	15	FSM	ENSG00000075413.19	ENST00000678302.1	3286	15	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_5	159.038116340013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	9	True	NA	-41	True	TTTAAA	-31	NA	103385414	103503779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_54788.known	chr14	+	3334	15	FSM	ENSG00000075413.19	ENST00000676694.1	3334	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	158.152922637476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	-17	True	NA	-41	True	TTTAAA	-31	NA	103385388	103503779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_54792.known	chr14	+	3165	15	FSM	ENSG00000075413.19	ENST00000677829.1	3165	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	157.413290028355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	9	True	NA	-41	True	TTTAAA	-31	NA	103385414	103503779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_5480.known	chr1	+	1940	6	FSM	ENSG00000198830.11	ENST00000361427.6	1940	6	0	0	0	0	multi-exon	FALSE	canonical	3	10833	junction_2	616.10667907433	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGTCCATTCCCTTA	8	True	NA	10	True	AATAAA	-17	NA	26472439	26476642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_54802.known	chr14	+	3637	18	FSM	ENSG00000075413.19	ENST00000678179.1	3637	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	236.455252648763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAATCTTGCATT	-29	True	NA	0	True	ATTAAA	-12	NA	103385376	103503820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103490951_103491108_103491776_103492035_103500155_103500201_103502881
transcript_54803.nic	chr14	+	2225	11	ISM	ENSG00000075413.19	ENST00000676475.1	3339	14	-12	13999	0	0	5prime_fragment	FALSE	canonical	3	441	junction_2	59.7887113090757	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCGAGACTCTGTCTCAA	-26	True	NA	NA	False	NA	NA	NA	103385379	103467656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078
transcript_54808.known	chr14	+	2619	9	FSM	ENSG00000075413.19	ENST00000561164.2	2619	9	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	48.7307654362211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCGAGACTCTGTCTCAA	9	True	NA	NA	False	NA	NA	NA	103385414	103467656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103466443_103467078
transcript_54813.known	chr14	-	1420	8	FSM	ENSG00000166165.14	ENST00000348956.7	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	2324	junction_7	477.350553598095	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	1	True	NA	-9	True	AATAAA	-19	NA	103522830	103519666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022_103522178_103522300_103522506_103522765
transcript_54815.known	chr14	-	735	3	FSM	ENSG00000166165.14	ENST00000554282.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	1915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTGCCTGCGTCTG	7666	False	NA	-21	True	AATAAA	-7	NA	103521443	103519678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103520043_103520121_103520312_103521262
transcript_54816.known	chr14	-	1170	4	FSM	ENSG00000166165.14	ENST00000553528.5	1170	4	0	0	0	0	multi-exon	FALSE	canonical	3	3534	junction_3	171.798331384989	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATAAACTAGGGTTTT	7339	False	NA	21	True	NA	NA	NA	103521770	103519694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262
transcript_54817.known	chr14	-	4063	1	FSM	ENSG00000260285.1	ENST00000568177.1	4063	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTTTGTCTCTGTGTCT	-11	True	NA	-4	True	NA	NA	NA	103529072	103525009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103525000_103529100
transcript_54823.known	chr14	+	3217	4	FSM	ENSG00000166166.13	ENST00000389749.9	3217	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	10.2740233382816	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	9	True	NA	8	True	ATTAAA	-19	NA	103529195	103537073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103529262_103529949_103530310_103532581_103532849_103534549
transcript_54826.nnic	chr14	+	2005	4	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	-18	-1030	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	59.4773532998532	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCTGAGTGATCCCTA	-9	True	NA	7	True	AATAAA	-14	NA	103529177	103536043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_103529262_103530149_103530310_103532581_103532849_103534549
transcript_54829.known	chr14	+	2827	3	FSM	ENSG00000166166.13	ENST00000299202.4	2827	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	2	True	NA	8	True	ATTAAA	-19	NA	103529225	103537073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103529262_103532581_103532849_103534549
transcript_54835.known	chr14	+	2467	17	FSM	ENSG00000126214.22	ENST00000555836.5	2467	17	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_15	128.328299076042	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	23	True	NA	-10	True	NA	NA	NA	103629236	103701514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103692358_103692426_103700654_103700728_103701200
transcript_54836.known	chr14	+	2524	17	FSM	ENSG00000126214.22	ENST00000334553.11	2550	17	26	0	0	0	multi-exon	FALSE	canonical	2	24	junction_15	130.727038495294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	23	True	NA	20	True	ATTAAA	-16	NA	103629236	103701544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103692358_103692426_103700654_103700728_103701200
transcript_5484.known	chr1	+	3192	22	FSM	ENSG00000117676.14	ENST00000374168.7	3192	22	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_13	31.9575256662968	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTCTCCTGCACTCTT	-13	True	NA	30	True	AATAAA	-14	NA	26529760	26575025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26529984_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_54844.known	chr14	+	2271	16	FSM	ENSG00000126214.22	ENST00000347839.10	2271	16	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_14	128.020415038644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTGGAGGTGCCTT	23	True	NA	NA	False	NA	NA	NA	103629236	103693743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103692358_103692426_103693552
transcript_54846.known	chr14	+	2426	16	FSM	ENSG00000126214.22	ENST00000554280.5	2426	16	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_14	111.647660074002	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	27	False	NA	20	True	ATTAAA	-16	NA	103629240	103701544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103700654_103700728_103701200
transcript_54847.known	chr14	+	2294	16	FSM	ENSG00000126214.22	ENST00000246489.11	2294	16	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_13	130.619991663689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTGGAGGTGCCTT	27	False	NA	NA	False	NA	NA	NA	103629240	103693743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103692358_103692426_103693552
transcript_54848.known	chr14	+	2453	16	FSM	ENSG00000126214.22	ENST00000452929.6	2453	16	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_13	114.784242046643	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	27	False	NA	20	True	ATTAAA	-16	NA	103629240	103701544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103700654_103700728_103701200
transcript_5485.known	chr1	+	3131	22	FSM	ENSG00000117676.14	ENST00000374166.8	3131	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.5935622946542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGAAGCACGCTCT	4	True	NA	19	True	AATAAA	-3	NA	26529777	26575014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26529984_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555183_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_54855.nic	chr14	+	2451	15	NIC	ENSG00000126214.22	novel	2426	16	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	42	junction_12	111.76645201454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	830	False	NA	20	True	ATTAAA	-16	NA	103629159	103701544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679308_103679519_103700654_103700728_103701200
transcript_54860.known	chr14	+	2416	15	FSM	ENSG00000126214.22	ENST00000445352.8	2416	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	130.468171894723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTTTCTAACTTCTA	83	False	NA	-18	True	NA	NA	NA	103629296	103686186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662922_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103684985_103685037_103685637
transcript_54864.known	chr14	+	2265	15	FSM	ENSG00000126214.22	ENST00000557450.5	2265	15	0	0	0	0	multi-exon	FALSE	canonical	2	93	junction_13	81.7109140163525	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	27	False	NA	-10	True	NA	NA	NA	103629240	103701514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103700654_103700728_103701200
transcript_54865.known	chr14	+	3250	15	FSM	ENSG00000126214.22	ENST00000389744.8	3250	15	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_13	98.6389003033855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACGTACATGGTAATT	13	True	NA	NA	False	AAAAAG	-21	NA	103629226	103686917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985_103685037_103685637
transcript_54867.known	chr14	+	15091	15	FSM	ENSG00000126214.22	ENST00000348520.10	15091	15	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_13	94.0218168342663	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATCATCTCCTTATTT	847	False	NA	8	True	AATAAA	-23	NA	103629176	103714249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103700654_103700728_103701200
transcript_54871.nnic	chr14	+	2352	15	NNC	ENSG00000126214.22	novel	2426	16	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	70	junction_12	106.952712228635	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	830	False	NA	20	True	ATTAAA	-16	NA	103629159	103701544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679407_103679519_103700654_103700728_103701200
transcript_54876.known	chr14	+	2322	14	FSM	ENSG00000126214.22	ENST00000380038.7	2322	14	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_12	119.797363426845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGTAAAGCCTTTTAC	-11	True	NA	71	True	NA	NA	NA	103629202	103685316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679308_103679519_103684985
transcript_5488.nnic	chr1	+	3066	21	NIC	ENSG00000117676.14	novel	3192	22	NA	NA	-33	0	intron_retention	FALSE	canonical	2	11	junction_16	98.1370979803255	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTCTCCTGCACTCTT	NA	False	NA	30	True	AATAAA	-14	NA	26529727	26575025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26529984_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_54892.known	chr14	+	2188	14	FSM	ENSG00000126214.22	ENST00000557575.5	2188	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	104.45893278726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGATTAGCTGTTCACTT	23	True	NA	35	True	AATAAA	-38	NA	103629236	103685916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103685637
transcript_54893.known	chr14	+	3135	14	FSM	ENSG00000126214.22	ENST00000553286.5	3135	14	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_13	86.4785091475258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCCGACTGACCTGTG	23	True	NA	7	True	AATAAA	-1	NA	103629236	103686211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985
transcript_54894.known	chr14	-	4684	2	FSM	ENSG00000166170.12	ENST00000299204.6	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTGTGAGTCTGAGG	-1	True	NA	-7	True	AATAAA	-26	NA	103562657	103556550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103561193_103562615
transcript_54896.known	chr14	-	4867	2	FSM	ENSG00000166170.12	ENST00000445922.2	4867	2	0	0	0	0	multi-exon	TRUE	canonical	2	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTCTGAGGTGTGTG	-19	True	NA	-1	True	AATAAA	-32	NA	103562318	103556544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103561193_103562099
transcript_54908.known	chr14	+	2506	5	FSM	ENSG00000256053.9	ENST00000674165.1	2506	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_2	35.2526594741446	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	-12	True	NA	NA	False	NA	NA	NA	103562962	103592171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_54910.known	chr14	+	782	4	FSM	ENSG00000256053.9	ENST00000458117.6	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	210.086225684175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	4	True	NA	23	True	AATAAA	-15	NA	103562978	103590527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103563125_103571622_103571821_103587273_103587365_103590180
transcript_54912.known	chr14	+	575	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	218.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	-10	True	NA	0	True	NA	NA	NA	103562964	103590504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103563125_103587273_103587365_103590180
transcript_54915.known	chr14	+	811	1	FSM	ENSG00000269958.1	ENST00000602422.1	811	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGAAAGGCTGTTT	4866	False	NA	31	True	AATAAA	-32	NA	103696352	103697163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103696400_103697200
transcript_54934.nnic	chr14	-	2654	10	NNC	ENSG00000126215.14	novel	2567	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	75.7334507041344	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	11	True	NA	-33	True	AATAAA	-16	NA	103715451	103697616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715336
transcript_54935.known	chr14	-	2567	10	FSM	ENSG00000126215.14	ENST00000555055.6	2567	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	65.7047267029634	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	11	True	NA	-33	True	AATAAA	-16	NA	103715451	103697616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_54942.known	chr14	-	2563	9	FSM	ENSG00000126215.14	ENST00000352127.11	2563	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	63.1603861213657	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	NA	False	NA	-33	True	AATAAA	-16	NA	103715504	103697616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
transcript_54944.nic	chr14	-	2641	9	NIC	ENSG00000126215.14	novel	2563	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	78.4696398296819	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	-26	True	NA	-33	True	AATAAA	-16	NA	103715488	103697616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711662_103715423
transcript_54955.known	chr14	-	2599	8	FSM	ENSG00000126215.14	ENST00000557439.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	108.736716289337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTTTTAATAGAAGC	-21	True	NA	NA	False	AATAAA	-12	NA	103715483	103704395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103706043_103706206_103706376_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_54971.known	chr14	-	2539	10	FSM	ENSG00000126215.14	ENST00000554913.5	2539	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	89.2413844096898	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTTCTTGCTGTCTGC	19	True	NA	-25	True	AATAAA	-24	NA	103715443	103697608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711181_103711465_103711568_103712874_103712969_103715423
transcript_54973.known	chr14	+	1521	8	FSM	ENSG00000100711.14	ENST00000216602.10	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	153.364179092027	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCTCGCCTTCCTGTG	0	True	NA	24	True	ATTAAA	-21	NA	103715729	103733668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103729792_103729847_103732619_103732763_103732982
transcript_54976.known	chr14	+	1383	7	FSM	ENSG00000100711.14	ENST00000311141.7	1383	7	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	128.859958438954	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	2	True	NA	20	True	ATTAAA	-17	NA	103715809	103733664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_54977.nic	chr14	+	2131	7	NIC	ENSG00000100711.14	novel	1383	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	390	junction_5	125.575231988195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	-4	True	NA	20	True	ATTAAA	-17	NA	103715725	103733664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729847_103732619_103732763_103732982
transcript_54986.known	chr14	+	566	5	FSM	ENSG00000100711.14	ENST00000554630.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_4	26.6211851727154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGTTTGGTGCCATGC	23	True	NA	NA	False	NA	NA	NA	103715830	103729211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090
transcript_54990.nic	chr14	+	1243	5	NIC	ENSG00000100711.14	novel	1383	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_1	282.925233056368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	0	True	NA	20	True	ATTAAA	-17	NA	103715729	103733664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_103715980_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_54996.known	chr14	-	842	5	FSM	ENSG00000156411.10	ENST00000414262.6	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2024.74381095486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTACTTATCTTGT	55	False	NA	-30	True	AATAAA	-15	NA	103921501	103912301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103920939_103921209_103921469
transcript_54997.known	chr14	-	749	5	FSM	ENSG00000156411.10	ENST00000555030.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2027.97095331763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACTTATCTTGTGG	3	True	NA	-28	True	AATAAA	-17	NA	103921520	103912299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103914478_103914634_103915065_103915190_103921469
transcript_54998.known	chr14	-	472	5	FSM	ENSG00000156411.10	ENST00000557040.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2044.71330508705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACCTGGTACTGCTTT	62	False	NA	-13	True	AATAAA	-18	NA	103921494	103912515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103918004_103918125_103921469
transcript_55.known	ERCC-00157	+	1003	1	FSM	ERCC-00157A	DQ839618	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00157_+_0_1000
transcript_55001.known	chr14	-	615	4	FSM	ENSG00000156411.10	ENST00000286953.8	615	4	0	0	0	0	multi-exon	TRUE	canonical	3	3952	junction_1	119.789630417476	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGCCTCTCTGAGCC	-6	True	NA	-16	True	AATAAA	-29	NA	103921529	103912287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103921469
transcript_55003.known	chr14	-	932	3	FSM	ENSG00000156411.10	ENST00000554089.5	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	4188	junction_2	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTAGCTGGGATT	12	True	NA	NA	False	NA	NA	NA	103921511	103913218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103913985_103915065_103915190_103921469
transcript_55005.known	chr14	-	271	3	FSM	ENSG00000156411.10	ENST00000553449.1	271	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1952.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTACCTGGTACTGCTT	-15	True	NA	-14	True	AATAAA	-17	NA	103921538	103912516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103921469
transcript_55016.known	chr14	+	6889	15	FSM	ENSG00000066735.15	ENST00000423312.7	6889	15	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	41.3132014281742	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGCTGCCGAGTTCAC	-1	True	NA	18	True	ATTAAA	-16	NA	104138586	104180894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104138765_104139042_104139289_104152014_104152462_104157754_104157943_104166858_104167049_104171722_104171936_104172574_104172669_104172976_104173240_104173329_104173514_104173705_104173869_104174147_104174311_104174981_104177899_104178549_104178756_104179235_104179387_104179608
transcript_55019.known	chr14	+	6714	14	FSM	ENSG00000066735.15	ENST00000315264.7	6714	14	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	41.0413271294238	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGCTGCCGAGTTCAC	452	False	NA	18	True	ATTAAA	-16	NA	104139039	104180894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104139289_104152014_104152462_104157754_104157943_104166858_104167049_104171722_104171936_104172574_104172669_104172976_104173240_104173329_104173514_104173705_104173869_104174147_104174311_104174981_104177899_104178549_104178756_104179235_104179387_104179608
transcript_55020.known	chr14	-	3348	4	FSM	ENSG00000258986.7	ENST00000556573.6	3348	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATTCCTCAAAA	10	True	NA	-1	True	AGTAAA	-15	NA	104604772	104590863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104593659_104595164_104595244_104596989_104597128_104604436
transcript_55022.known	chr14	+	7578	22	FSM	ENSG00000203485.14	ENST00000330634.11	7578	22	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	20.6127231034984	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCTCCTGTTGCAGT	-10	True	NA	NA	False	NA	NA	NA	104689605	104722535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915_104703950_104706034_104706177_104706909_104707052_104707252_104708003_104708435_104708588_104708670_104708733_104709280_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713444_104713607_104714202_104714857_104718794
transcript_55027.known	chr14	+	1689	5	FSM	ENSG00000203485.14	ENST00000398337.8	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	6.49519052838329	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGCCAGGTACTGT	5	True	NA	NA	False	AATAAA	-19	NA	104689620	104704809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915
transcript_55028.known	chr14	+	2200	11	FSM	ENSG00000203485.14	ENST00000674631.1	2200	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	5.4230987451825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGATCCAGTAAGGTAT	1915	False	NA	11	True	AATAAA	-13	NA	104709293	104715324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713444_104713607_104714202
transcript_55029.known	chr14	+	1692	3	FSM	ENSG00000203485.14	ENST00000675029.1	1692	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTGTACCATGTGGCA	2833	False	NA	NA	False	AAAAAG	-40	NA	104702511	104704738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104703221_104703294_104703455_104703915
transcript_55035.known	chr14	+	1723	13	FSM	ENSG00000185100.11	ENST00000330877.7	1723	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	8.18026079453868	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGCAGTTGTTACATGT	0	True	NA	12	True	AATAAA	-21	NA	104724228	104747310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104724463_104735019_104735123_104738375_104738439_104739327_104739379_104739749_104739817_104740600_104740709_104740838_104740921_104741116_104741244_104741847_104742003_104743066_104743192_104744811_104744910_104746235_104746386_104746950
transcript_55041.known	chr14	+	2025	2	FSM	ENSG00000185100.11	ENST00000557271.5	2025	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGAGCAGTTGTTACAT	2796	False	NA	10	True	AATAAA	-19	NA	104744718	104747308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104746386_104746950
transcript_55042.known	chr14	+	856	6	FSM	ENSG00000184990.13	ENST00000553819.5	856	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	724.019226264054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCGCCAGGGGCCTGAC	-18	True	NA	NA	False	NA	NA	NA	104753170	104768494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104766789_104766898_104767863_104768008_104768391
transcript_55048.known	chr14	+	752	4	FSM	ENSG00000184990.13	ENST00000329967.11	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	1385	junction_3	47.6678321535836	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGACTCTTGTCTGTC	6	True	NA	28	True	AATAAA	-17	NA	104753146	104759654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104759427
transcript_55050.known	chr14	+	1244	3	FSM	ENSG00000184990.13	ENST00000535554.4	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	20	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGAGGCCCAGACTCAT	6	True	NA	NA	False	NA	NA	NA	104753146	104757479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629_104755825_104756603
transcript_55051.known	chr14	+	550	3	FSM	ENSG00000184990.13	ENST00000347067.9	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	663	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTGTCTGTCAGCAC	18	True	NA	33	True	AATAAA	-22	NA	104753158	104759659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104756603_104756761_104759427
transcript_55052.known	chr14	+	4142	2	FSM	ENSG00000184990.13	ENST00000556431.1	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGGACTCTTGTCTGT	13	True	NA	27	True	AATAAA	-16	NA	104753201	104759653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629
transcript_55053.known	chr14	+	461	2	FSM	ENSG00000184990.13	ENST00000554013.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAGTGGTTAGTAATC	-8	True	NA	NA	False	AATAGA	-11	NA	104753180	104756925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104756603
transcript_55055.known	chr14	-	2866	15	FSM	ENSG00000142208.18	ENST00000349310.7	2866	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_14	262.474955073463	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-7	True	NA	-2	True	AATAAA	-15	NA	104795751	104769348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793211_104795483
transcript_55056.known	chr14	-	2957	15	FSM	ENSG00000142208.18	ENST00000649815.2	2957	15	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_14	251.415350707606	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-4	True	NA	-2	True	AATAAA	-15	NA	104795748	104769348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793305_104795483
transcript_55060.known	chr14	-	3066	14	FSM	ENSG00000142208.18	ENST00000555528.5	3066	14	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_13	175.266323130454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAAAGTTGCTTTTCA	7248	False	NA	-24	True	AATATA	-26	NA	104793700	104769370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126
transcript_55061.known	chr14	-	2779	14	FSM	ENSG00000142208.18	ENST00000407796.7	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_13	145.602522899008	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-4	True	NA	-2	True	AATAAA	-15	NA	104795748	104769348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104795483
transcript_55062.known	chr14	-	2587	13	FSM	ENSG00000142208.18	ENST00000682269.1	2587	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_12	259.837596180554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCCTGCCCTCCAAGG	1	True	NA	NA	False	NA	NA	NA	104795743	104771554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793305_104795483
transcript_55064.known	chr14	+	1411	2	FSM	ENSG00000179627.10	ENST00000555360.1	1411	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGGGTGGAAGGGAAGG	19	True	NA	NA	False	NA	NA	NA	104800595	104802486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104800701_104801180
transcript_55065.known	chr14	+	2518	1	FSM	ENSG00000258701.1	ENST00000555578.1	2518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5018	False	NA	NA	False	NA	NA	NA	104821200	104823718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104821200_104823700
transcript_55067.known	chr14	+	6813	19	NNC	ENSG00000099814.17	novel	6727	19	NA	NA	33	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	38.6864971498893	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCTCTATCCTTG	23	True	NA	57	True	AATAAA	-45	NA	104865312	104896770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_104865514_104868423_104868556_104876255_104876346_104877884_104877966_104878444_104878502_104880286_104880426_104882727_104882833_104883031_104883509_104883830_104884550_104885368_104885543_104886039_104886131_104886274_104887979_104889514_104889759_104892975_104893136_104893522_104893667_104893760_104893850_104894284_104894379_104894536_104894589_104894710
transcript_55069.known	chr14	+	1962	6	FSM	ENSG00000140104.14	ENST00000389964.7	1962	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	9.40212741883453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTTGTCACTGGTTC	492	False	NA	15	True	AATAAA	-12	NA	104986278	104995514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104986855_104988942_104989089_104989631_104989708_104991490_104991621_104992947_104993065_104994597
transcript_55071.known	chr14	+	790	5	FSM	ENSG00000140104.14	ENST00000551606.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.65336728815391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTGTGTTCTGGGCT	-12	True	NA	NA	False	NA	NA	NA	104985774	104994890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104985879_104988942_104989089_104991490_104991621_104992947_104993065_104994597
transcript_55075.known	chr14	+	2379	5	FSM	ENSG00000140104.14	ENST00000547315.6	2379	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.54950975679639	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCACTGGTTCAT	1	True	NA	17	True	AATAAA	-14	NA	104985787	104995516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104986855_104988942_104989089_104991490_104991621_104992947_104993065_104994597
transcript_55080.known	chr14	-	1536	3	FSM	ENSG00000170779.11	ENST00000392590.3	1536	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	298.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGTGGTGTTAGTTA	20	True	NA	76	True	ATTAAA	-21	NA	105021060	105009935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105010634_105011159_105011936_105020998
transcript_55086.known	chr14	-	2448	2	FSM	ENSG00000170779.11	ENST00000336219.4	2448	2	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	0	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTAGTAGTTGTAGTGC	-3	True	NA	33	True	NA	NA	NA	105021083	105009572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105011936_105020998
transcript_55095.nic	chr14	-	844	5	NIC	ENSG00000183828.15	novel	854	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	88.7158384957275	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	NA	False	NA	-6	True	AATAAA	-17	NA	105181338	105172938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_105173262_105176533_105176772_105176962_105176992_105177691_105177736_105181128
transcript_55097.known	chr14	-	854	5	FSM	ENSG00000183828.15	ENST00000392568.7	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	17.6210101867061	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-18	True	NA	-6	True	AATAAA	-17	NA	105181312	105172938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105173262_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_55100.known	chr14	-	1042	5	FSM	ENSG00000183828.15	ENST00000551024.5	1042	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	89.6921819335442	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTGCGGTGAGCCTGA	NA	False	NA	NA	False	NA	NA	NA	105181323	105175487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105175988_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_55103.known	chr14	-	570	4	FSM	ENSG00000183828.15	ENST00000339418.9	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	3.74165738677394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGATTAGGGGAGGG	51	False	NA	NA	False	NA	NA	NA	105181243	105176425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105176772_105176962_105177028_105177691_105177736_105181128
transcript_55106.known	chr14	-	3671	18	FSM	ENSG00000185024.18	ENST00000547530.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	13.551388799983	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	3	True	NA	-9	True	AGTAAA	-31	NA	105301001	105209285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105252506_105252580_105256517_105256550_105272720_105272895_105286295_105286377_105300445
transcript_55108.nnic	chr14	-	3533	17	NIC	ENSG00000185024.18	novel	3671	18	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_12	17.4857084500457	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	-9	True	NA	-9	True	AGTAAA	-31	NA	105301013	105209285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105252506_105252580_105256517_105256550_105272720_105272895_105286295_105286377_105300445
transcript_5511.known	chr1	+	4377	4	FSM	ENSG00000060642.12	ENST00000674222.1	4377	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	23.4568161143456	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	-11	True	NA	NA	False	AATAAA	-16	NA	26787966	26800659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26787990_26790758_26790894_26794112_26795235_26797562
transcript_55115.known	chr14	-	3579	14	FSM	ENSG00000185024.18	ENST00000392557.8	3579	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	18.4868416342399	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	1645	False	NA	-9	True	AGTAAA	-31	NA	105247894	105209285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105247070
transcript_55117.known	chr14	-	2858	13	FSM	ENSG00000185024.18	ENST00000446501.6	2858	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_12	19.1528936020992	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGGCTTGTCT	135	False	NA	-12	True	AGTAAA	-28	NA	105249404	105209288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105249148
transcript_55128.known	chr14	-	3314	17	FSM	ENSG00000185024.18	ENST00000379937.6	3314	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	19.8815830292761	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	570	False	NA	-9	True	AGTAAA	-31	NA	105300725	105209285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105252506_105252580_105256517_105256550_105272720_105272895_105300445
transcript_55133.known	chr14	+	3708	24	FSM	ENSG00000179364.15	ENST00000325438.12	3708	24	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_20	31.8114720541711	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATATTTTTAATGCTTT	128	False	NA	22	True	AATAAA	-30	NA	105314414	105395206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
transcript_55139.known	chr14	+	2871	21	FSM	ENSG00000182979.18	ENST00000331320.12	2871	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_17	168.294050696987	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	-24	True	NA	27	True	ATTAAA	-44	NA	105419826	105470729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
transcript_5514.known	chr1	+	4673	4	FSM	ENSG00000060642.12	ENST00000674202.1	4673	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	25.31578339473	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	-28	True	NA	NA	False	AATAAA	-16	NA	26787949	26800659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26788269_26790758_26790894_26794112_26795235_26797562
transcript_55142.known	chr14	+	2709	20	FSM	ENSG00000182979.18	ENST00000405646.5	2709	20	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_16	167.420018527887	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	87	False	NA	27	True	ATTAAA	-44	NA	105419937	105470729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
transcript_55146.known	chr14	+	2770	20	FSM	ENSG00000182979.18	ENST00000406191.5	2770	20	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_4	110.474022717066	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	41	False	NA	27	True	ATTAAA	-44	NA	105419891	105470729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105469466_105469499_105469840_105469993_105470064
transcript_55151.nic	chr14	+	2736	19	NIC	ENSG00000182979.18	novel	2888	22	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	275	junction_3	100.500859894362	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGTCCTTCCCTGTGTC	22	True	NA	25	True	ATTAAA	-42	NA	105419872	105470727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_105420064_105438671_105438740_105445417_105445512_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105469466_105469499_105469840_105469993_105470064
transcript_55154.known	chr14	+	2616	4	FSM	ENSG00000226174.7	ENST00000451127.3	2616	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTTTGGTTTCTTTTTC	-13	True	NA	NA	False	CATAAA	-17	NA	105398537	105413859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105398636_105399301_105399491_105411367_105411497_105411659
transcript_55158.known	chr14	-	572	3	FSM	ENSG00000251602.7	ENST00000661026.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGAACTGACTGCTGG	NA	False	NA	NA	False	NA	NA	NA	105419080	105418017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105418313_105418681_105418817_105418938
transcript_5516.known	chr1	+	2181	4	FSM	ENSG00000060642.12	ENST00000374145.6	2181	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	35.1220095603249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATAAAGTGGGACCATT	-17	True	NA	2	True	NA	NA	NA	26788176	26798268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26788395_26790758_26790894_26794112_26795235_26797562
transcript_55160.known	chr14	-	2279	3	FSM	ENSG00000251602.7	ENST00000551271.5	2279	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	AATAAA	-3	NA	105419739	105416883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105418310_105418681_105418817_105419021
transcript_55166.known	chr14	+	1178	8	FSM	ENSG00000182809.11	ENST00000329146.9	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	4.29997626951212	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTCTCTGCTTGTGGG	0	True	NA	23	True	AATAAA	-17	NA	105474820	105480162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_55168.known	chr14	+	1373	7	FSM	ENSG00000182809.11	ENST00000547643.5	1373	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	4.15331193145904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATTGCAGGATTGTCTC	11	True	NA	13	True	AATAAA	-7	NA	105474831	105480152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479494_105479585
transcript_55169.known	chr14	+	991	7	FSM	ENSG00000182809.11	ENST00000538259.2	991	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	27.396775966039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCACACTGCCTC	-3	True	NA	-72	True	NA	NA	NA	105474817	105480067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105474906_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_55172.known	chr14	+	817	4	FSM	ENSG00000182809.11	ENST00000550577.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.1792659696229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGATTGTCTCTGCTT	-7	True	NA	18	True	AATAAA	-12	NA	105474813	105480157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105474906_105479124_105479220_105479435_105479494_105479585
transcript_55174.known	chr14	+	1144	9	FSM	ENSG00000185347.18	ENST00000432805.5	1144	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	14.9200996980583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGCAGTGCTGGGAGC	225	False	NA	NA	False	NA	NA	NA	105490123	105498696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105490238_105490980_105491127_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105497356_105497444_105497797_105497978_105498616
transcript_55175.known	chr14	+	1920	9	FSM	ENSG00000185347.18	ENST00000392523.9	1920	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	13.6907815700931	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCGGGTTTCCCTGTT	-31	True	NA	43	True	AATAAA	-39	NA	105491245	105499248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105491523_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105495879_105496087_105497356_105497444_105497797_105497978_105498616
transcript_55178.known	chr14	+	1074	8	FSM	ENSG00000185347.18	ENST00000551054.5	1074	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	18.0611207191761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGGGACCTGCGGGCAGC	0	True	NA	NA	False	NA	NA	NA	105490182	105498784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105490238_105490980_105491127_105491621_105491701_105492106_105492310_105492578_105492735_105497356_105497444_105497797_105497978_105498616
transcript_55179.known	chr14	+	1630	8	FSM	ENSG00000185347.18	ENST00000392522.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	5.69281681290608	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCTCAGCCTGGTGGT	-28	True	NA	-37	True	NA	NA	NA	105491248	105499168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105491523_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105497356_105497444_105497797_105497978_105498616
transcript_55182.nic	chr14	+	1681	8	NIC	ENSG00000185347.18	novel	1630	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	11.9931953496088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCCTCCCCCTGCCAC	1035	False	NA	24	True	AATAAA	-20	NA	105491217	105499229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_105491523_105491621_105491701_105492147_105492310_105492578_105492735_105493834_105493934_105497356_105497444_105497797_105497978_105498616
transcript_55185.known	chr14	+	1553	7	FSM	ENSG00000185347.18	ENST00000354560.10	1553	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	13.7931142241337	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGCAGCTTTCCTGCC	-9	True	NA	4	True	NA	NA	NA	105491267	105499209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105491523_105491621_105491701_105492106_105492310_105492578_105492735_105497356_105497444_105497797_105497978_105498616
transcript_5519.known	chr1	+	4972	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	33.2498955721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCCTCCTGTCCTCA	1	True	NA	NA	False	AATAAA	-9	NA	26788194	26800652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
transcript_55193.known	chr14	+	1548	2	FSM	ENSG00000184986.11	ENST00000392519.7	1548	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCACTGCTTTGCCTGT	-7	True	NA	25	True	TTTAAA	-28	NA	105526582	105530198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105526654_105528721
transcript_55207.nnic	chr15	+	1659	12	NNC	ENSG00000276550.5	novel	5181	32	NA	NA	-742	-18662	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_3	47.7765113975719	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAAACGAAGAGAGTGAT	NA	False	NA	NA	False	AAGAAA	-4	NA	22494827	22545805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766
transcript_55213.nnic	chr15	+	562	5	NNC	ENSG00000276550.5	novel	5181	32	NA	NA	-742	-41065	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	110.148479335849	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGAAGAAACTCCTGC	NA	False	NA	NA	False	AAGAAA	-25	NA	22494827	22523402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22523041_22523202_22523346
transcript_55214.nnic	chr15	+	402	4	NNC	ENSG00000276550.5	novel	5181	32	NA	NA	-742	-41065	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	126.117229415951	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGAAGAAACTCCTGC	NA	False	NA	NA	False	AAGAAA	-25	NA	22494827	22523402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22523346
transcript_55217.known	chr15	+	582	6	FSM	ENSG00000170113.16	ENST00000557930.1	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	51.4563893020099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAGAGCCCTCTGCCTG	41	False	NA	NA	False	NA	NA	NA	22786812	22823916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22814082_22814154_22820312_22820474_22823727
transcript_55218.known	chr15	+	6553	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	12.6589889011722	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	2	True	NA	20	True	AATAAA	-21	NA	22786643	22829789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
transcript_55220.known	chr15	+	4223	3	FSM	ENSG00000274253.6	ENST00000619879.6	4229	3	6	0	6	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCCATCTGCTCCTC	-2	True	NA	NA	False	NA	NA	NA	22757840	22768189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22757995_22758818_22758922_22764223
transcript_55226.known	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_12	39.2561955478226	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-6	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_55228.nic	chr15	-	4492	31	NIC	ENSG00000273749.5	novel	4515	32	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_30	78.7137994396295	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	294	False	NA	-22	True	AATAAA	-14	NA	22980421	22869465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947319_22980286
transcript_5523.known	chr1	+	5045	8	FSM	ENSG00000204160.12	ENST00000374142.9	5045	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	10.8081601825016	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTCTGGTGGCGCCT	-23	True	NA	NA	False	AATAAA	-25	NA	26826687	26857604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26827140_26832446_26832608_26848607_26848758_26850300_26850439_26850557_26850607_26851128_26851232_26852752_26852866_26853725
transcript_5524.known	chr1	+	1308	1	FSM	ENSG00000175793.12	ENST00000339276.6	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTCTCTTCCAGTT	0	True	NA	11	True	AATAAA	-18	NA	26863148	26864456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26863100_26864500
transcript_55240.nic	chr15	-	1048	9	ISM	ENSG00000273749.5	ENST00000617928.5	6826	31	-88	70080	-74	6097	5prime_fragment	FALSE	canonical	3	343	junction_8	29.4276124583698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATCCAAAATCGACAAGT	259	False	NA	NA	False	AATAAA	-1	NA	22980456	22937131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_55241.known	chr15	-	4515	32	FSM	ENSG00000273749.5	ENST00000610365.4	4515	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	107.348257009783	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	10	True	NA	-22	True	AATAAA	-14	NA	22980352	22869465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22947910_22948030_22980286
transcript_5525.known	chr1	-	4665	5	FSM	ENSG00000142751.15	ENST00000374135.9	4665	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	20.1494416796099	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTATTCTCTTTT	-6	True	NA	0	True	AATAAA	-18	NA	26890283	26876131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26879750_26884159_26884291_26885972_26886134_26888968_26889126_26889685
transcript_55255.known	chr15	+	3227	8	FSM	ENSG00000140157.16	ENST00000337451.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	352.118080843831	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	-25	True	NA	9	True	AATAAA	-21	NA	22838665	22868384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_55266.known	chr15	+	4076	7	FSM	ENSG00000140157.16	ENST00000674173.1	4076	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	363.805656299563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	-32	True	NA	NA	False	NA	NA	NA	22838658	22869362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_55270.known	chr15	+	4169	7	FSM	ENSG00000140157.16	ENST00000398014.7	4169	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	364.840452191853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	-46	True	NA	NA	False	NA	NA	NA	22838644	22869362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22858539_22858631_22860628_22860790_22866212
transcript_55271.known	chr15	+	2099	7	FSM	ENSG00000140157.16	ENST00000674477.1	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	345.23023718479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAGAAATCACCCCAAGG	-5	True	NA	145	True	AATGAA	-30	NA	22838685	22867398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22839654_22839791_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_55280.known	chr15	+	4082	7	FSM	ENSG00000140157.16	ENST00000674289.1	4082	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	400.02861008794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	-12	True	NA	NA	False	NA	NA	NA	22838678	22869362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838948_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_55282.known	chr15	+	2280	6	FSM	ENSG00000140157.16	ENST00000398013.7	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_1	191.002198940222	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	-4	True	NA	8	True	AATAAA	-9	NA	22838686	22867716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_55290.nnic	chr15	+	2336	6	NIC	ENSG00000140157.16	novel	2280	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	388.533962479472	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	-34	True	NA	8	True	AATAAA	-9	NA	22838656	22867716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_22838948_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_55295.known	chr15	+	1412	5	FSM	ENSG00000140157.16	ENST00000539711.2	1412	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	380.157204324737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGTCCTCAAAT	7	True	NA	54	True	NA	NA	NA	22838697	22866916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22851638_22851871_22858539_22858631_22860628_22860790_22866212
transcript_55298.known	chr15	-	3744	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.8721649384925	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTATCCTTTTGCTGC	3	True	NA	-1	True	AATAAA	-19	NA	23039569	22999176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_55301.nic	chr15	-	1605	13	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	3	17666	0	-7990	5prime_fragment	FALSE	canonical	3	94	junction_7	13.3570102276753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGATAACGCTAGTGCG	3	True	NA	NA	False	AAGAAA	-4	NA	23039569	23017949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_55311.nnic	chr15	+	1702	4	NNC	ENSG00000274471.2	novel	883	6	NA	NA	-5916	-2517	intron_retention	FALSE	canonical	3	33	junction_3	5.09901951359278	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATCTGTTTTTACTAGG	NA	False	NA	NA	False	NA	NA	NA	23303690	23310759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_23303819_23304427_23304531_23309139_23309458_23309606
transcript_55312.nnic	chr15	+	1851	3	NNC	ENSG00000274471.2	novel	883	6	NA	NA	-5916	-2517	intron_retention	FALSE	canonical	3	36	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATCTGTTTTTACTAGG	NA	False	NA	NA	False	NA	NA	NA	23303690	23310759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_23303819_23304427_23304531_23309139
transcript_55313.known	chr15	-	4319	1	FSM	ENSG00000254585.5	ENST00000650528.1	4319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTTTGTCTTTATT	-5	True	NA	-3	True	AGTAAA	-39	NA	23647867	23643548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_23643500_23647900
transcript_55314.known	chr15	-	1906	1	FSM	ENSG00000182636.8	ENST00000649030.2	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCTTAAGTTTCT	-4	True	NA	NA	False	AATAAA	-13	NA	23687305	23685399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_23685400_23687300
transcript_55363.known	chr15	+	1605	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	3395.95845354177	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	14	False	NA	21	True	AATAAA	-23	NA	24856550	24978582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55374.known	chr15	+	1763	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	3417.84548877271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	-3	True	NA	-22	True	NA	NA	NA	24954947	24978539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55391.nic	chr15	+	1585	11	NIC	ENSG00000128739.23	novel	1763	12	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	3	948	junction_3	2641.83643702634	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	NA	False	NA	16	True	AATAAA	-18	NA	24954847	24978577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_5540.nnic	chr1	+	1508	10	NNC	ENSG00000090273.14	novel	1792	9	NA	NA	-21	211	at_least_one_novel_splicesite	TRUE	canonical	3	118	junction_2	1232.93480047496	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTGTGTCCTCTCTTG	-33	True	NA	14	True	ATTAAA	-15	NA	26921721	26946395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26921930_26924088_26924167_26934248_26934420_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_55429.known	chr15	+	1298	10	FSM	ENSG00000128739.23	ENST00000577565.1	1298	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	2424.93588053197	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAATAATAAATGCATAGA	26	False	NA	-13	True	NA	NA	NA	24955004	24978548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974287_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55438.known	chr15	+	1468	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	0	0	0	0	multi-exon	FALSE	canonical	3	7312	junction_5	229.178242131898	4460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	8	True	NA	12	True	GATAAA	-20	NA	24954986	24978723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55445.known	chr15	+	1304	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_3	2323.23831040072	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTTGTATATATTTT	NA	False	NA	22	True	AATAAA	-24	NA	24954934	24978583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55451.nnic	chr15	+	1430	10	NNC	ENSG00000128739.23	novel	1468	10	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_1	2326.00716536586	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	NA	False	NA	16	True	AATAAA	-18	NA	24954852	24978577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_24955037_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55493.known	chr15	+	1751	13	FSM	ENSG00000128739.23	ENST00000400100.5	1751	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3611.52637302506	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	-5	True	NA	21	True	AATAAA	-23	NA	24823646	24978582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24823851_24829797_24829906_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55517.known	chr15	+	17832	11	FSM	ENSG00000224078.15	ENST00000551631.7	17832	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	375.000746665923	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGAGTTCTGGTCATT	1679	False	NA	17	True	AATAAA	-31	NA	24979556	25036490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24979643_24979946_24980085_24981774_24982438_24998365_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589
transcript_55538.nnic	chr15	+	1373	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	529	combination_of_known_splicesites	FALSE	canonical	3	557	junction_1	87.2021916136414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTCCCCTTTATCCAC	-2	True	NA	14	True	AATAAA	-18	NA	24981993	25021354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
transcript_55539.nnic	chr15	+	1693	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	849	combination_of_known_splicesites	FALSE	canonical	3	557	junction_1	87.2021916136414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACGTGTACAGCCATTA	-2	True	NA	8	True	ATTAAA	-13	NA	24981993	25021674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
transcript_55540.nnic	chr15	+	3269	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	557	junction_1	87.2021916136414	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCCATCTCAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	24981993	25023250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
transcript_55541.known	chr15	+	2256	10	FSM	ENSG00000224078.15	ENST00000663996.1	2256	10	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_8	138.258212534856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	NA	False	NA	25	True	AATAAA	-17	NA	25107469	25119890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
transcript_55543.nnic	chr15	+	863	6	NIC	ENSG00000128739.23	novel	1304	10	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	3140.36256505519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	NA	False	NA	16	True	AATAAA	-18	NA	24954884	24978577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24955063_24962113_24962210_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_55546.known	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	3592.03436632904	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	35	False	NA	15	True	AATAAA	-23	NA	24955013	24968829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
transcript_55547.nnic	chr15	+	1639	4	NIC	ENSG00000214265.11	novel	1325	8	NA	NA	26960	2037	combination_of_known_splicesites	FALSE	canonical	3	339	junction_1	291.978690242209	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTTTCTCATTCATT	-2	True	NA	18	True	ATTAAA	-30	NA	24981993	25002313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_24998969_24999079_25000244_25000375_25001357
transcript_55548.nnic	chr15	+	1727	4	NIC	ENSG00000214265.11	novel	1325	8	NA	NA	26960	2125	combination_of_known_splicesites	FALSE	canonical	3	339	junction_1	291.978690242209	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGGAGTTTTGTGGT	-2	True	NA	35	True	AATATA	-17	NA	24981993	25002401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_24998969_24999079_25000244_25000375_25001357
transcript_55549.nic	chr15	+	1700	2	ISM	ENSG00000273173.5	ENST00000577949.5	650	3	-101	4773	-101	-4773	5prime_fragment	FALSE	canonical	3	7621	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGTATGAATACTAAT	NA	False	NA	NA	False	AAAAAG	-5	NA	24954884	24963635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_24955063_24962113
transcript_5555.known	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	FALSE	canonical	3	3016	junction_8	98.7142340293435	2485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	-12	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_55550.nic	chr15	+	1849	2	ISM	ENSG00000273173.5	ENST00000577949.5	650	3	-3	4526	-3	-4526	5prime_fragment	FALSE	canonical	3	7621	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGTTGT	4	True	NA	NA	False	AATAAA	-1	NA	24954982	24963882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_24955063_24962113
transcript_55551.nic	chr15	+	2111	2	ISM	ENSG00000273173.5	ENST00000577949.5	650	3	-101	4362	-101	-4362	5prime_fragment	FALSE	canonical	3	7621	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAAACATCTGTTAGC	NA	False	NA	NA	False	AAAAAG	-10	NA	24954884	24964046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_24955063_24962113
transcript_55556.known	chr15	-	2986	15	FSM	ENSG00000114062.22	ENST00000428984.6	2986	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	192.31936926872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAGGAAAAAAAAAGAAAA	570	False	NA	NA	False	AATAAA	-11	NA	25438524	25339105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25407066_25407138_25408619_25408685_25409087_25409208_25411907_25411972_25438488
transcript_55561.known	chr15	-	5274	14	FSM	ENSG00000114062.22	ENST00000650110.1	5274	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	179.650317802086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-10	True	NA	-19	True	AATAAA	-13	NA	25439024	25337246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25408619_25408685_25409087_25409208_25411907_25411972_25438488
transcript_55565.known	chr15	-	8728	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	131.316702627232	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-10	True	NA	1	True	CATAAA	-21	NA	25439024	25333727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_55572.known	chr15	-	5025	11	FSM	ENSG00000114062.22	ENST00000649550.1	5025	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_10	90.6242793074792	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-10	True	NA	-19	True	AATAAA	-13	NA	25439024	25337246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
transcript_55573.known	chr15	-	9352	10	FSM	ENSG00000114062.22	ENST00000635914.1	9352	10	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_9	87.9368460253658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	9	True	NA	1	True	CATAAA	-21	NA	25439005	25333727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
transcript_55576.known	chr15	-	2598	10	FSM	ENSG00000114062.22	ENST00000675177.1	2598	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	153.581039853457	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAATAA	565	False	NA	NA	False	NA	NA	NA	25438529	25339136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25438488
transcript_55584.known	chr15	-	3371	6	FSM	ENSG00000114062.22	ENST00000675000.1	3371	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	105.494265246979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAAATTCGAGAATTCA	15	True	NA	NA	False	TTTAAA	-43	NA	25438999	25369477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_55588.nic	chr15	-	1755	4	ISM	ENSG00000114062.22	ENST00000625778.3	4968	9	-43	18723	-43	478	5prime_fragment	FALSE	canonical	3	221	junction_3	83.2919897442458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGATGATGAAGAGC	0	True	NA	NA	False	NA	NA	NA	25439094	25371004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_25371813_25375464_25375764_25405460_25405503_25438488
transcript_55589.nic	chr15	-	1147	4	ISM	ENSG00000114062.22	ENST00000625778.3	4968	9	-43	19331	-43	0	5prime_fragment	FALSE	canonical	3	221	junction_3	83.2919897442458	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAAAGGAAAAAGCTGC	0	True	NA	-2	True	NA	NA	NA	25439094	25371612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_25371813_25375464_25375764_25405460_25405503_25438488
transcript_55593.known	chr15	-	5767	9	FSM	ENSG00000166206.15	ENST00000311550.10	5767	9	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	64.4426828662494	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAATGTGAAGACTGATT	-5	True	NA	-10	True	ATTAAA	-15	NA	26773066	26543551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26772882
transcript_55597.known	chr15	-	4494	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	277.794635252375	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	7397	False	NA	-7	True	AATAAA	-13	NA	26773788	26544784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
transcript_55603.known	chr15	-	1900	7	FSM	ENSG00000166206.15	ENST00000400188.7	1900	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	384.245870360228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGGCTGGGGTGAGCC	-1	True	NA	NA	False	NA	NA	NA	26629090	26547188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26628976
transcript_55608.known	chr15	-	406	4	FSM	ENSG00000166206.15	ENST00000554722.1	406	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	468.317793336486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGCTGCTTCAGAGAGC	2	True	NA	NA	False	NA	NA	NA	26773751	26771818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26771958_26772401_26772470_26772680_26772773_26773644
transcript_55609.known	chr15	-	4509	7	FSM	ENSG00000166206.15	ENST00000636466.1	4509	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	384.245870360228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAATTTTCTCAGTAG	8855	False	NA	-20	True	NA	NA	NA	26772330	26544797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26771998
transcript_55612.known	chr15	+	2553	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	42.8113302759912	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	-13	True	NA	17	True	AATAAA	-21	NA	26867061	26949208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_55614.nic	chr15	+	2784	11	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	40.7597841014891	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	24	False	NA	16	True	AATAAA	-20	NA	26867136	26949207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_26867419_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_55616.known	chr15	+	2761	11	FSM	ENSG00000186297.12	ENST00000400081.7	2761	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	37.7311542362542	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	13	False	NA	16	True	AATAAA	-20	NA	26867125	26949207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_55620.known	chr15	+	2183	10	FSM	ENSG00000186297.12	ENST00000355395.9	2183	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	50.7849496515563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAAGTACTGCATGATC	194	False	NA	NA	False	AATGAA	-32	NA	26866910	26948752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_26867112_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_55632.known	chr15	-	3143	24	FSM	ENSG00000104044.16	ENST00000354638.8	3143	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.92780863281699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGGAGTAGTTTACAT	-5	True	NA	NA	False	AATAAA	-17	NA	28099315	27754874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_27755473_27844958_27845053_27851381_27851476_27871153_27871259_27871862_27871923_27926126_27926255_27951783_27951893_27955157_27955216_27957587_27957736_27966689_27966823_27983344_27983484_27985063_27985189_27986586_27986644_27989600_27989667_27990575_27990648_28014775_28014930_28016103_28016187_28018396_28018558_28022500_28022574_28024844_28024903_28027870_28028060_28032064_28032164_28081647_28081896_28099223
transcript_55633.known	chr15	-	3068	23	FSM	ENSG00000104044.16	ENST00000353809.9	3068	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.94607042078251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGGAGTAGTTTACAT	-2	True	NA	NA	False	AATAAA	-17	NA	28099312	27754874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_27755473_27844958_27845053_27851381_27851476_27871153_27871259_27871862_27871923_27926126_27926255_27951783_27951893_27955157_27955216_27957587_27957736_27966689_27966823_27983344_27983484_27985063_27985189_27986586_27986644_27989600_27989667_28014775_28014930_28016103_28016187_28018396_28018558_28022500_28022574_28024844_28024903_28027870_28028060_28032064_28032164_28081647_28081896_28099223
transcript_55637.known	chr15	-	3121	21	FSM	ENSG00000128731.18	ENST00000564734.5	3121	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	34.1304849071911	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATTGATGAACAG	29	False	NA	8	True	AAAAAG	-13	NA	28322149	28254487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28298516_28298630_28299401_28299517_28321361_28321465_28322074
transcript_55646.nic	chr15	-	3068	20	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	-30	143448	-30	0	5prime_fragment	FALSE	canonical	3	35	junction_13	30.7181810691884	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATTGATGAACAG	NA	False	NA	8	True	AAAAAG	-13	NA	28322209	28254487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_55659.nic	chr15	-	3038	19	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	-30	144831	-30	-1383	5prime_fragment	FALSE	canonical	3	35	junction_12	31.1801317714334	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTTGGAGGCACACG	NA	False	NA	NA	False	NA	NA	NA	28322209	28255870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_55662.nnic	chr15	-	2810	18	NIC	ENSG00000128731.18	novel	3121	21	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	33.8839868887067	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATTGATGAACAG	NA	False	NA	8	True	AAAAAG	-13	NA	28322209	28254487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_55668.nnic	chr15	-	2780	17	NIC	ENSG00000128731.18	novel	3121	21	NA	NA	-30	-1383	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	34.521505978158	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTTGGAGGCACACG	NA	False	NA	NA	False	NA	NA	NA	28322209	28255870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_55670.nic	chr15	-	412	4	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	-30	181924	-30	-12930	5prime_fragment	FALSE	canonical	3	67	junction_1	39.2371705854991	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGAAGAAACTCCTGC	NA	False	NA	15	True	AAGAAA	-28	NA	28322209	28292963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28293023_28299401_28299517_28321361_28321465_28322074
transcript_55671.nic	chr15	-	353	3	ISM	ENSG00000128731.18	ENST00000564734.5	3121	21	-60	44914	-30	-19368	5prime_fragment	FALSE	canonical	3	111	junction_1	26	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGCCTTTAACTAGTG	NA	False	NA	NA	False	NA	NA	NA	28322209	28299401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28299517_28321361_28321465_28322074
transcript_55672.known	chr15	-	491	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_1	54	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGGATGATGGGAT	59	False	NA	NA	False	NA	NA	NA	28322119	28320121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_28320465_28321361_28321465_28322074
transcript_55673.known	chr15	-	15364	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_70	52.0765486444192	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGCTGAGCTTTCTTA	-1	False	NA	NA	False	AATAAA	-16	NA	28322179	28111039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_55675.known	chr15	+	480	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	5	49	-5	multi-exon	FALSE	canonical	3	40	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTATGTGTACAGTT	62	False	NA	30	True	AATATA	-26	NA	28832379	28838983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28832461_28833275_28833379_28838687
transcript_55681.nic	chr15	+	3273	14	NIC	ENSG00000034053.15	novel	3349	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	30.0447398146921	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATTTATTTAGATGC	-22	True	NA	34	True	AATAAA	-24	NA	28885976	29117717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_28886279_28921639_28921719_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_55684.nic	chr15	+	3304	14	NIC	ENSG00000034053.15	novel	3349	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	11.5625389812233	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATTTATTTAGATGC	-22	True	NA	34	True	AATAAA	-24	NA	28885976	29117717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_55685.nic	chr15	+	3902	14	NIC	ENSG00000034053.15	novel	3941	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	11.5625389812233	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGACTGGTCT	-22	True	NA	20	True	AATAAA	-20	NA	28885976	29118315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_55687.nnic	chr15	+	2313	13	NIC	ENSG00000034053.15	novel	3349	15	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_3	31.5669482563998	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATTTATTTAGATGC	-22	True	NA	34	True	AATAAA	-24	NA	28885976	29117717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_28886279_28921639_28921750_28995752_28995807_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_55691.known	chr15	+	2555	12	FSM	ENSG00000034053.15	ENST00000559814.5	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	11.7880735358221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGGCTCCCTTGTCCC	-10	True	NA	NA	False	NA	NA	NA	28886159	29108620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269
transcript_55702.known	chr15	+	3349	15	FSM	ENSG00000034053.15	ENST00000558330.5	3349	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.3189405715894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATTTATTTAGATGC	23	True	NA	34	True	AATAAA	-24	NA	28886021	29117717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28886279_28895519_28895610_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_55703.known	chr15	-	4963	11	FSM	ENSG00000104059.5	ENST00000261275.5	4963	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	17.3381083166532	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTCTGAGGTCTAA	-24	True	NA	-4	True	AATAAA	-18	NA	29570979	29120251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_29123656_29124686_29124762_29126266_29126492_29128788_29128865_29136365_29136502_29137033_29137195_29151733_29151842_29196429_29196565_29252367_29252479_29381774_29381832_29570504
transcript_55707.known	chr15	+	2530	2	FSM	ENSG00000256802.3	ENST00000536835.3	2588	2	58	0	2	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGTGAGGCCGGGCA	-2	True	NA	NA	False	AAGAAA	-15	NA	29674989	29679168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_29675527_29677175
transcript_55708.known	chr15	-	5938	27	FSM	ENSG00000104067.17	ENST00000677774.1	5938	27	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	97.7648201510727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGGGGATATTTTTTT	8	True	NA	NA	False	AAGAAA	-10	NA	29822077	29700772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_29701690_29704161_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
transcript_55710.known	chr15	-	5007	27	FSM	ENSG00000104067.17	ENST00000545208.6	5007	27	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	91.3231873962633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTGAAATATAGGAACTT	433	False	NA	-67	True	NA	NA	NA	29822028	29701594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_29701690_29704221_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
transcript_55713.nic	chr15	-	766	4	ISM	ENSG00000104067.17	ENST00000495972.6	2890	9	0	13181	0	-13181	5prime_fragment	FALSE	canonical	3	557	junction_1	18.2391520270726	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGGAAAAATGCAAAAATT	-41	True	NA	-20	True	NA	NA	NA	29822502	29772083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_29772167_29773232_29773358_29800645_29800703_29822001
transcript_55716.known	chr15	+	1158	5	FSM	ENSG00000178081.12	ENST00000568486.5	1158	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.34520787991171	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAACTCTGGTTACTGC	NA	False	NA	NA	False	AAAAAG	-26	NA	30103731	30131757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30104009_30110301_30110427_30116891_30116939_30127684_30127764_30131127
transcript_55717.known	chr15	-	1913	11	FSM	ENSG00000166664.15	ENST00000401522.7	1913	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.2458156118733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGGGCCACTGAGTAGT	178	False	NA	NA	False	NA	NA	NA	30393360	30362057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977_30373146_30377029_30377110_30380352_30380400_30381702_30381877_30383318_30383383_30386862_30386988_30393251
transcript_55718.known	chr15	-	3411	10	FSM	ENSG00000166664.15	ENST00000299847.7	3411	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	11.4449838060605	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCACTCATTTCTGG	NA	False	NA	NA	False	AATAAA	-22	NA	30393540	30360565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977_30373146_30377029_30377110_30380352_30380400_30383318_30383383_30386862_30386988_30393251
transcript_55719.known	chr15	-	2794	9	FSM	ENSG00000166664.15	ENST00000397827.7	2794	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	11.6397755562554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCAGGGAGGGGATGGTG	NA	False	NA	NA	False	NA	NA	NA	30393661	30361239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977_30373146_30377029_30377110_30380352_30380400_30386862_30386988_30393251
transcript_55735.known	chr15	+	3256	11	FSM	ENSG00000285077.3	ENST00000428041.4	3256	11	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_10	74.4170007457973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTGAATATCTGATC	198	False	NA	NA	False	AATAAA	-25	NA	30625965	30649529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30648303
transcript_55736.nic	chr15	+	1611	5	ISM	ENSG00000285077.3	ENST00000689358.1	2164	8	300	4405	101	0	5prime_fragment	FALSE	canonical	3	70	junction_4	76.9654955158479	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAGAAAT	299	False	NA	NA	False	NA	NA	NA	30626066	30635385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079
transcript_55737.nic	chr15	+	2286	4	ISM	ENSG00000285077.3	ENST00000689358.1	2164	8	300	4386	101	17	intron_retention	FALSE	canonical	3	115	junction_2	71.4624998785299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTATATTAGTATCTAAA	299	False	NA	NA	False	AAAAAG	-9	NA	30626066	30635404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169
transcript_55738.known	chr15	-	4985	16	FSM	ENSG00000166912.17	ENST00000435680.6	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	11.2380306697096	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-7	True	NA	-16	True	AATAAA	-18	NA	30991628	30938940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
transcript_55740.known	chr15	+	4442	15	FSM	ENSG00000198690.10	ENST00000657391.1	4442	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	47.490546857415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAACCCGCATTAGCAG	3	True	NA	NA	False	AAAAAG	-12	NA	30903863	30942767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_55742.known	chr15	+	4849	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	30.3342771027585	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTCATGAATGCCTT	9	True	NA	NA	False	AATAAA	-25	NA	30903914	30943108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_55750.known	chr15	+	2157	4	FSM	ENSG00000198690.10	ENST00000658773.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	88.6954840388669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGTAACAATTTACCAAAA	3	True	NA	NA	False	NA	NA	NA	30903863	30911212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613
transcript_55753.known	chr15	+	1450	2	FSM	ENSG00000259448.3	ENST00000559292.2	1450	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGATTCCTGCATTA	40	False	NA	NA	False	NA	NA	NA	31216019	31220720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_31216038_31219288
transcript_55754.known	chr15	+	6845	2	FSM	ENSG00000169926.11	ENST00000307145.4	6845	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGAGCTAGTTTCTT	-17	True	NA	20	True	AATAAA	-21	NA	31326834	31377899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_31327790_31372009
transcript_55759.known	chr15	+	6149	10	FSM	ENSG00000175344.19	ENST00000306901.9	6149	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	10.1105005920687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCGTAGTTTTGTAATAT	0	True	NA	NA	False	AATAAA	-27	NA	32030514	32173018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32111789_32111900_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_55764.known	chr15	+	2084	9	FSM	ENSG00000175344.19	ENST00000637519.1	2084	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.6052514283886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGATGCTGTTTCTACA	NA	False	NA	NA	False	NA	NA	NA	32030461	32169010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_55766.known	chr15	+	1788	8	FSM	ENSG00000175344.19	ENST00000437966.3	1788	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.591121303952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTCCAATAATTGACTG	41	False	NA	NA	False	AATAAA	-15	NA	32030555	32168888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_55768.known	chr15	+	2160	3	FSM	ENSG00000175344.19	ENST00000636295.1	2160	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTGGTGCACACCTG	80	False	NA	NA	False	AATACA	-12	NA	32030594	32103267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32030650_32030897_32031038_32101302
transcript_55771.known	chr15	-	875	4	FSM	ENSG00000261279.5	ENST00000564495.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAACACAAAACTCT	NA	False	NA	NA	False	AAAAAG	-17	NA	32434637	32406596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_32407218_32410581_32410661_32428190_32428316_32434587
transcript_55772.known	chr15	+	3152	13	FSM	ENSG00000198826.11	ENST00000543522.5	3152	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	130.338315122181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGATGTACATGTTAGT	16	False	NA	11	True	AATAAA	-23	NA	32615570	32637903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32615608_32615804_32615919_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_55777.known	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_11	42.6040777158305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	-11	True	NA	11	True	AATAAA	-14	NA	32615503	32639941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_55789.known	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	39.188773902739	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	24	False	NA	4	True	ATTAAA	-15	NA	32615538	32636181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_55793.known	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	31	junction_3	21.3766227454198	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	-38	True	NA	12	True	AATAAA	-21	NA	32641675	32697098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
transcript_55795.known	chr15	+	1235	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	11.5308282443197	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	-38	True	NA	12	True	AATAAA	-21	NA	32641675	32697098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
transcript_55800.known	chr15	-	4060	2	FSM	ENSG00000248905.10	ENST00000558197.1	4060	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACTACTGTTCTTTTC	3	True	NA	NA	False	AATAAA	-18	NA	33068162	33062666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_33065075_33066510
transcript_55802.known	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	29.8202951024969	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	1	True	NA	0	True	ATTAAA	-23	NA	34101862	34084016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
transcript_55803.known	chr15	-	506	5	FSM	ENSG00000134153.10	ENST00000528949.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	266.722116630774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAAGTGGGGCTGGCAA	116	False	NA	NA	False	AGTAAA	-4	NA	34101807	34084363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101764
transcript_55804.known	chr15	-	581	4	FSM	ENSG00000134153.10	ENST00000527822.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	306.933579495992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCCAGAGCTGGCATTT	116	False	NA	NA	False	AGTAAA	-38	NA	34101807	34084329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34101603
transcript_55808.known	chr15	-	2740	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	42.5858609817338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTAGTTATCACTGTC	5	True	NA	-7	True	GATAAA	-23	NA	34210096	34140673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_55817.known	chr15	-	853	6	FSM	ENSG00000134152.11	ENST00000560108.5	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	176.933207736705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAACTTGTAGCTTATTT	-6	True	NA	NA	False	NA	NA	NA	34210079	34148657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
transcript_55818.known	chr15	-	924	5	FSM	ENSG00000134152.11	ENST00000560671.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	27.105119442644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGAGCTC	40	False	NA	NA	False	TTTAAA	-42	NA	34210061	34148389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_55822.known	chr15	-	4239	25	FSM	ENSG00000140199.13	ENST00000560611.5	4239	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_24	5.6414881803376	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGTCAGTGTATACTT	6296	False	NA	-16	True	TTTAAA	-9	NA	34336844	34233258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34233973_34235180_34235315_34236014_34236200_34236707_34236816_34237418_34237551_34238231_34238402_34238964_34239161_34240660_34240830_34241232_34241338_34242101_34242222_34243973_34244073_34245284_34245404_34245692_34245868_34250297_34250356_34250630_34250730_34250898_34251058_34252169_34252385_34254347_34254590_34255261_34255393_34256228_34256284_34257641_34257789_34258812_34258945_34260925_34261021_34275344_34275390_34336409
transcript_55823.known	chr15	+	1006	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	528.880598528628	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	17	True	NA	26	True	AATAAA	-31	NA	34225036	34230156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
transcript_55826.known	chr15	+	852	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	550.97872513878	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	-7	True	NA	17	True	AATAAA	-22	NA	34225012	34230147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
transcript_55831.known	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	5576	junction_1	0	1253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	4	True	NA	-6	True	ATTAAA	-20	NA	34343136	34341718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34342109_34343019
transcript_55832.known	chr15	+	4109	8	FSM	ENSG00000184507.16	ENST00000537011.6	4109	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.03015750727543	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGAGTGCCCTTTTTCT	1323	False	NA	15	True	AATAAA	-20	NA	34343314	34357735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_34343703_34345941_34346036_34347968_34348678_34350703_34350833_34353735_34353873_34354445_34354733_34355020_34355138_34355487
transcript_55839.nnic	chr15	-	1976	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	48.2459684262608	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	490	False	NA	NA	False	ATTAAA	-15	NA	34367222	34358908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361168_34361230_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_55848.known	chr15	-	2165	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	22.8151823218378	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTACCATTCCATATT	-20	True	NA	NA	False	ATTAAA	-13	NA	34367196	34358632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_55859.nic	chr15	-	1849	13	NIC	ENSG00000176454.15	novel	2165	14	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	41.6549983662092	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	423	False	NA	NA	False	ATTAAA	-15	NA	34367289	34358908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_34359303_34359588_34359746_34360110_34360210_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_55863.nic	chr15	-	2270	13	NIC	ENSG00000176454.15	novel	2165	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	99	junction_2	23.3196388384459	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	500	False	NA	NA	False	ATTAAA	-15	NA	34367212	34358908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_34359303_34359588_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_55882.known	chr15	-	6488	23	FSM	ENSG00000215252.12	ENST00000569100.5	6488	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	50.5514425818635	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTTTTGCCTTAAAA	NA	False	NA	-24	True	ATTAAA	-11	NA	34588503	34525281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34588390
transcript_55891.nic	chr15	-	2201	10	ISM	ENSG00000215252.12	ENST00000683415.1	5607	24	-537	8721	-537	-6857	5prime_fragment	FALSE	canonical	3	46	junction_9	25.7125611806591	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGGGCG	4261	False	NA	NA	False	AATACA	-10	NA	34584188	34533815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34583515
transcript_55901.known	chr15	-	1382	7	FSM	ENSG00000159251.8	ENST00000290378.6	1382	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	41.4919670940452	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCCTCTCGTTTGTTT	-1	True	NA	NA	False	AATAAA	-23	NA	34795549	34790229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34790556_34791113_34791296_34792089_34792282_34792407_34792570_34793244_34793570_34794679_34794831_34795505
transcript_55903.known	chr15	-	9597	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	0	0	0	multi-exon	TRUE	canonical	3	266	junction_23	38.1324068192265	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGGCTTTCTGTTCT	-14	True	NA	-4	True	AGTAAA	-21	NA	34969742	34851781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
transcript_55907.known	chr15	-	5439	3	FSM	ENSG00000198146.4	ENST00000356321.4	5439	3	0	0	0	0	multi-exon	FALSE	canonical	3	1186	junction_1	17.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-17	True	NA	-3	True	AATAAA	-16	NA	34988287	34978340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34983491_34987556_34987674_34988115
transcript_5591.known	chr1	-	2125	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	15.7735714267745	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTTACTTTTCTAATT	-11	True	NA	-16	True	AATAAA	-17	NA	26900467	26890487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
transcript_55913.known	chr15	-	563	2	FSM	ENSG00000198146.4	ENST00000559564.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCACAGAGGAAAGATGG	459	False	NA	NA	False	AAGAAA	-28	NA	34988225	34983037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34983491_34988115
transcript_55914.known	chr15	-	2098	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_1	44.7267746992783	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTGAAGATA	7	True	NA	-4	True	AATAAA	-22	NA	35546165	35370879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
transcript_55919.known	chr15	-	3648	4	FSM	ENSG00000134146.12	ENST00000440392.3	3648	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	92.6318879580173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGGTTTCTTCATGT	-20	True	NA	NA	False	AATAAA	-15	NA	35546192	35518993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_35522279_35538273_35538468_35542412_35542508_35546118
transcript_55921.known	chr15	-	556	3	FSM	ENSG00000134146.12	ENST00000560526.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACGTTTTGTATAGTT	-21	True	NA	NA	False	ATTAAA	-13	NA	35546193	35538081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_35538468_35542412_35542508_35546118
transcript_55923.known	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	15.0173453432031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	57	False	NA	1	True	AATAAA	-16	NA	36579843	36810244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
transcript_55924.known	chr15	+	2872	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	6.28410693734599	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	-13	True	NA	1	True	AATAAA	-16	NA	36579625	36810244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_55929.known	chr15	+	7270	7	FSM	ENSG00000166068.13	ENST00000299084.9	7270	7	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	20.6074420214316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAATAGTGTTTCTTTT	11	True	NA	15	True	AATAAA	-19	NA	38252835	38357249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013
transcript_55931.known	chr15	+	1177	5	FSM	ENSG00000166068.13	ENST00000561205.1	1177	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	114.724398015418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAGAACCCAGGGCTT	23	True	NA	NA	False	AGTAAA	-32	NA	38252847	38326363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38325947
transcript_55934.known	chr15	+	3111	7	FSM	ENSG00000171262.11	ENST00000491535.5	3111	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.7950549357115	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7	True	NA	NA	False	NA	NA	NA	38454153	38483665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291
transcript_55935.known	chr15	-	2816	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	3.3153786416019	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTTGCTGGCACAT	-15	True	NA	NA	False	AATAAA	-22	NA	39782841	39600030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
transcript_55942.known	chr15	+	7789	22	FSM	ENSG00000137801.11	ENST00000260356.6	7789	22	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	10.6649658507957	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTGTTTCTTTCTGTC	2	True	NA	NA	False	TATAAA	-40	NA	39581078	39599466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_39581229_39581828_39581925_39582192_39582753_39583616_39583693_39583987_39584188_39584299_39584423_39585469_39585564_39587346_39587521_39588041_39588219_39588525_39588700_39588958_39589087_39589201_39589355_39589804_39590024_39590515_39590624_39591190_39591351_39591504_39591624_39592567_39592803_39592999_39593228_39593396_39593669_39594098_39594197_39594300_39594441_39595361
transcript_55954.known	chr15	-	828	3	FSM	ENSG00000166073.11	ENST00000558041.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATGGCTGAGGCCAG	988	False	NA	NA	False	NA	NA	NA	39919951	39801626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_39802255_39860819_39860923_39919854
transcript_55956.known	chr15	-	3912	3	FSM	ENSG00000166073.11	ENST00000561100.2	3912	3	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_2	96	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	-4	True	NA	7	True	AATAAA	-28	NA	39920266	39799007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_39802255_39807005_39807259_39919854
transcript_55960.nnic	chr15	-	4516	2	NIC	ENSG00000166073.11	novel	3912	3	NA	NA	-852	5	combination_of_known_splicesites	FALSE	canonical	3	345	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGAGCTATATTTTC	NA	False	NA	12	True	AATAAA	-33	NA	39921118	39799002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_39802255_39919854
transcript_55961.nnic	chr15	-	4229	2	NIC	ENSG00000166073.11	novel	3912	3	NA	NA	-706	-112	combination_of_known_splicesites	FALSE	canonical	3	345	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGGTTGGGTATGTTT	NA	False	NA	-13	True	AATAAA	-14	NA	39920972	39799143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_39802255_39919854
transcript_55963.known	chr15	+	5538	39	FSM	ENSG00000128829.12	ENST00000263791.10	5538	39	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_12	46.3568373726157	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCTTTTTAATTGTA	-30	True	NA	24	True	AATAAA	-13	NA	39934114	40035591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413_39976845_39978077_39978148_39985804_39985889_39987982_39988106_39990272_39990378_39992174_39992230_39992768_39992849_39996963_39997066_39998730_39998785_40000987_40001225_40002712_40002789_40003192_40003315_40007015_40007066_40008026_40008196_40009613_40009731_40011280_40011347_40016501_40016673_40017107_40017243_40019092_40019201_40020898_40021028_40022518_40022606_40025976_40026090_40029405_40029465_40030358_40030457_40032168_40032238_40032756_40032802_40034325_40034445_40035026
transcript_55969.nic	chr15	+	2696	12	ISM	ENSG00000128829.12	ENST00000263791.10	5538	39	-51	58432	-51	-1133	5prime_fragment	FALSE	canonical	3	391	junction_10	47.5524938296772	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACTTTTAGAGAGTAA	-3	True	NA	NA	False	TTTAAA	-25	NA	39934063	39977159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413
transcript_55970.nic	chr15	+	3335	12	ISM	ENSG00000128829.12	ENST00000263791.10	5538	39	20	57722	-11	-423	5prime_fragment	FALSE	canonical	3	391	junction_10	47.5524938296772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGGCTAATTTTTATT	-10	True	NA	10	True	ATTAAA	-16	NA	39934134	39977869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413
transcript_55973.nic	chr15	+	706	5	ISM	ENSG00000128829.12	ENST00000559624.5	3548	11	-82	21465	-51	7069	5prime_fragment	FALSE	canonical	3	437	junction_4	32.6525267016199	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATGGCTAAGCAG	-3	True	NA	41	True	GATAAA	-15	NA	39934063	39953964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903
transcript_55977.nic	chr15	+	645	4	ISM	ENSG00000128829.12	ENST00000559624.5	3548	11	-82	26161	-51	2373	5prime_fragment	TRUE	canonical	3	476	junction_3	23.8932812499432	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATGCCCTTGTCGATG	-3	True	NA	NA	False	NA	NA	NA	39934063	39949268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115
transcript_55978.known	chr15	-	791	6	FSM	ENSG00000140319.11	ENST00000558527.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3536.62785149922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCTTTATTCCTT	6	True	NA	-13	True	ATTAAA	-16	NA	40039164	40036040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40036501_40036985_40037019_40037308_40037349_40038281_40038395_40038875_40038949_40039092
transcript_55980.known	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	6703	junction_4	794.831546618527	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-11	True	NA	45	True	NA	NA	NA	40039181	40035689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
transcript_55985.known	chr15	+	1058	4	FSM	ENSG00000248508.9	ENST00000667323.1	1058	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.8884444373331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	-14	True	NA	NA	False	ATTAAA	-19	NA	40039290	40065705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40064295_40064602_40065220
transcript_55986.known	chr15	+	879	4	FSM	ENSG00000248508.9	ENST00000668306.2	942	4	60	3	0	0	multi-exon	FALSE	canonical	3	7	junction_2	14.8398861930347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	0	True	NA	NA	False	ATTAAA	-19	NA	40039304	40065705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40064460_40064602_40065220
transcript_55989.known	chr15	+	669	4	FSM	ENSG00000248508.9	ENST00000560341.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.4571575998762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCCTCCTAATTTT	44	True	NA	NA	False	TATAAA	-23	NA	40039348	40057000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40056452_40056642_40056729
transcript_55990.known	chr15	+	568	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	45	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	0	True	NA	NA	False	TATAAA	-26	NA	40039304	40057003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40056688
transcript_55991.known	chr15	+	2538	3	FSM	ENSG00000248508.9	ENST00000504245.7	2560	3	22	0	5	0	multi-exon	FALSE	canonical	3	15	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATGTTTAATAGTT	-9	True	NA	-11	True	AATAAA	-6	NA	40039295	40067496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40065220
transcript_55996.known	chr15	-	4692	5	FSM	ENSG00000104081.14	ENST00000354670.9	4692	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	10.356157588604	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTTATTTTTCAA	-3	True	NA	-1	True	AATAAA	-16	NA	40108879	40087889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40091889_40104179_40104341_40105794_40106092_40108258_40108387_40108772
transcript_55998.nnic	chr15	-	4597	4	NIC	ENSG00000104081.14	novel	4692	5	NA	NA	-20	0	intron_retention	FALSE	canonical	3	12	junction_3	18.7320284243028	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTTATTTTTCAA	-2	True	NA	-1	True	AATAAA	-16	NA	40108912	40087889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_40091889_40104179_40104341_40105794_40106092_40108772
transcript_55999.known	chr15	-	671	4	FSM	ENSG00000104081.14	ENST00000558774.5	671	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	19.8662192343351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATCGGGCAGGACTGAC	18	False	NA	NA	False	NA	NA	NA	40108892	40091733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40091889_40105794_40106092_40108258_40108358_40108772
transcript_56.known	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00160_+_0_700
transcript_56000.known	chr15	-	630	4	FSM	ENSG00000104081.14	ENST00000559701.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.3367343397905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGTGGGCTGCCCTCT	-3	True	NA	NA	False	NA	NA	NA	40108879	40091790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40091889_40105794_40106092_40108258_40108387_40108772
transcript_56004.known	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_5	70.7227154409306	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	15	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_56007.nic	chr15	+	3930	22	NIC	ENSG00000156970.13	novel	3669	23	NA	NA	-44	0	intron_retention	TRUE	canonical	3	565	junction_5	70.9410345673611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	NA	False	NA	15	True	AATAAA	-16	NA	40160978	40221123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_56016.known	chr15	+	4020	11	FSM	ENSG00000137843.12	ENST00000560346.5	4020	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.5345847153196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTTCCTGTGTCTC	159	False	NA	14	True	ATTAAA	-16	NA	40239419	40277485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40239803_40240598_40240682_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
transcript_56020.known	chr15	+	4215	10	FSM	ENSG00000137843.12	ENST00000455577.6	4215	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	23.7351643072332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGCTTCCTGTGTCTCT	18	True	NA	15	True	ATTAAA	-17	NA	40239090	40277486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40239803_40240598_40240682_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40275926
transcript_56021.nic	chr15	+	3715	10	NIC	ENSG00000137843.12	novel	2540	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	36	junction_5	7.4236858171067	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTTCCTGTGTCTCTG	NA	False	NA	16	True	ATTAAA	-18	NA	40252532	40277487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40252692_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
transcript_56027.known	chr15	-	4517	32	FSM	ENSG00000137841.12	ENST00000557821.5	4517	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	13.6927029641375	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTAAGCCTGGTC	6	True	NA	-10	True	ATTAAA	-17	NA	40307837	40287908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291605_40291651_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296757_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
transcript_56029.known	chr15	-	4242	31	FSM	ENSG00000137841.12	ENST00000456256.6	4242	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	13.7294897534063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTTGGCCCTGCTT	114	False	NA	NA	False	NA	NA	NA	40307825	40288138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296745_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
transcript_56030.nnic	chr15	-	3816	26	NNC	ENSG00000137841.12	novel	4627	32	NA	NA	-2491	0	intron_retention	FALSE	canonical	1	1	junction_24	14.4075535744275	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTAAGCCTGGTC	6159	False	NA	-10	True	ATTAAA	-17	NA	40301780	40287908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291605_40291651_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296745_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301746
transcript_56034.nic	chr15	-	1868	8	ISM	ENSG00000137841.12	ENST00000557821.5	4517	32	16081	0	-403	0	3prime_fragment	FALSE	canonical	3	7	junction_7	12.5568096819118	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTAAGCCTGGTC	6163	False	NA	-10	True	ATTAAA	-17	NA	40291756	40287908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291605
transcript_56035.nic	chr15	-	2058	7	NIC	ENSG00000137841.12	novel	4517	32	NA	NA	-512	0	intron_retention	FALSE	canonical	3	7	junction_6	13.4122663591538	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTAAGCCTGGTC	6054	False	NA	-10	True	ATTAAA	-17	NA	40291865	40287908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291488_40291605
transcript_56041.known	chr15	-	701	4	FSM	ENSG00000137841.12	ENST00000560701.1	701	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	18.1536650722535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCACTCCCCCACCCTGC	6566	False	NA	NA	False	NA	NA	NA	40291353	40289065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40289359_40290024_40290083_40290576_40290838_40291264
transcript_56046.known	chr15	-	4693	1	FSM	ENSG00000230778.2	ENST00000434396.2	4693	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGCCTCTCTTTGCCT	-15	True	NA	1	True	AATAAA	-24	NA	40283064	40278371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40278400_40283100
transcript_56047.known	chr15	-	1641	6	FSM	ENSG00000137841.12	ENST00000559381.5	1641	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.04648658313239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTTAAGCCTGGTCT	6590	False	NA	-9	True	ATTAAA	-18	NA	40291329	40287907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017
transcript_56048.known	chr15	+	3024	1	FSM	ENSG00000259330.3	ENST00000638170.2	3024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTAAGTTGATCATT	-3	True	NA	24	True	AATACA	-20	NA	40323691	40326715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40323700_40326700
transcript_56049.known	chr15	+	903	10	FSM	ENSG00000128944.14	ENST00000560220.5	903	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	189.513672590569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGCATAAAATCTCAGAG	5	True	NA	NA	False	NA	NA	NA	40382975	40393626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40384456_40384520_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_56055.known	chr15	+	1899	9	FSM	ENSG00000128944.14	ENST00000416151.6	1899	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	151.70031105769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCTACATGAAACAATAC	-7	True	NA	26	True	AATAAA	-26	NA	40382720	40394154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393192
transcript_56056.known	chr15	+	1388	9	FSM	ENSG00000128944.14	ENST00000561169.5	1388	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	156.330379325325	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAACAATACACCTTG	8	True	NA	32	True	AATAAA	-32	NA	40382978	40394160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389488_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_56059.known	chr15	+	1598	9	FSM	ENSG00000128944.14	ENST00000560981.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	142.18298069741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	-7	True	NA	44	True	AATAAA	-44	NA	40382720	40394172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386404_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_56060.known	chr15	+	1464	8	FSM	ENSG00000128944.14	ENST00000448395.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	158.649530315686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	68	False	NA	44	True	AATAAA	-44	NA	40382835	40394172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391948_40392024_40393468
transcript_56063.known	chr15	+	665	3	FSM	ENSG00000128944.14	ENST00000559591.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGTCAATGAAGAGTG	-30	True	NA	NA	False	AATACA	-15	NA	40382940	40384922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40384456
transcript_56075.nnic	chr15	+	2308	12	NNC	ENSG00000128928.10	novel	4665	12	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	113.458915999734	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCCCTTGTTTCTTCC	6418	False	NA	NA	False	AAAACA	-17	NA	40405751	40419157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414822_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_56078.known	chr15	+	4350	12	FSM	ENSG00000128928.10	ENST00000487418.8	4350	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	46.5507809452384	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGCCTGAGTGGTAA	-15	True	NA	10	True	AATAAA	-36	NA	40405794	40421308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_56120.known	chr15	+	819	6	FSM	ENSG00000128928.10	ENST00000558610.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	149.741109919755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTATAGGTGGGTGCA	264	False	NA	NA	False	NA	NA	NA	40406073	40411690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40406351_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554
transcript_56121.known	chr15	+	4665	12	FSM	ENSG00000128928.10	ENST00000651168.1	4665	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	46.5507809452384	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGAGTGGTAAATGGA	6151	False	NA	15	True	AATAAA	-41	NA	40405484	40421313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_56126.nic	chr15	+	4687	7	NIC	ENSG00000140320.12	novel	4698	7	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	17.6698110409314	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	2193	False	NA	37	True	AATAAA	-31	NA	40439741	40468236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40439966_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
transcript_56127.nic	chr15	+	4737	7	NIC	ENSG00000140320.12	novel	4698	7	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	16.4823137534348	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	2134	False	NA	37	True	AATAAA	-31	NA	40439682	40468236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40439966_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
transcript_56128.known	chr15	+	4698	7	FSM	ENSG00000140320.12	ENST00000561234.5	4698	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	19.9164923283862	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATCGTTTCCTGTGT	2172	False	NA	30	True	AATAAA	-24	NA	40439720	40468229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40439966_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
transcript_56129.nic	chr15	+	4734	7	NIC	ENSG00000140320.12	novel	4698	7	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	19.1630431357397	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	2134	False	NA	37	True	AATAAA	-31	NA	40439682	40468236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40439966_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
transcript_56130.known	chr15	+	4779	7	FSM	ENSG00000140320.12	ENST00000416165.6	4779	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	13.9851111305321	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	9	True	NA	37	True	AATAAA	-31	NA	40440952	40468236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40441269_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
transcript_56137.known	chr15	+	2175	1	FSM	ENSG00000169105.8	ENST00000306243.7	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCATTTCTGTGATTT	-19	True	NA	23	True	AATAAA	-17	NA	40470983	40473158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40471000_40473200
transcript_56140.known	chr15	-	1509	4	FSM	ENSG00000128891.16	ENST00000416810.7	1509	4	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_1	5.71547606649408	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTGTGGTGCTG	-20	True	NA	-4	True	TATAAA	-17	NA	40565042	40553098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564975
transcript_56141.known	chr15	-	1075	3	FSM	ENSG00000128891.16	ENST00000558871.1	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATCTGCCTGCCTCGGC	-20	True	NA	NA	False	NA	NA	NA	40565042	40556620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40557373_40562771_40563028_40564975
transcript_56142.known	chr15	+	2365	3	FSM	ENSG00000166133.18	ENST00000315616.12	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0.5	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGTCTCTGTTTCCCTT	-22	True	NA	14	True	TATAAA	-21	NA	40569298	40574949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40569944_40571603_40571901_40573526
transcript_56143.known	chr15	+	1558	3	FSM	ENSG00000166133.18	ENST00000559271.1	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	83.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACGGGCTTCTAA	11	True	NA	-67	True	NA	NA	NA	40569331	40574358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40569761_40571603_40571901_40573526
transcript_56145.known	chr15	+	5923	10	FSM	ENSG00000137812.21	ENST00000533001.1	5923	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	3.02254900194121	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTTATTTTGCCAA	-4	True	NA	NA	False	NA	NA	NA	40594264	40626042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40611477_40611512_40615340_40615379_40618958_40619012_40620639
transcript_56152.known	chr15	+	2436	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	41.7854602865402	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	-2	True	NA	14	True	AATAAA	-15	NA	40695173	40732340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_56153.nic	chr15	+	1598	10	NIC	ENSG00000051180.17	novel	2436	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	121.691778230449	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTGCACAGATTCTT	-14	True	NA	17	True	AATAAA	-26	NA	40695161	40731594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40695322_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_56154.known	chr15	+	1611	9	FSM	ENSG00000051180.17	ENST00000423169.6	1611	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	122.195284278895	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTCTGCACAGATTC	NA	False	NA	15	True	AATAAA	-24	NA	40695128	40731592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40731054
transcript_56156.known	chr15	+	1545	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_5	129.069688056491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAAAATAAAATGCCTCA	11	True	NA	-20	True	ACTAAA	-39	NA	40695186	40731557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_56160.known	chr15	-	718	3	FSM	ENSG00000245849.8	ENST00000533146.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTGGACGGAACAGAG	2	True	NA	NA	False	NA	NA	NA	40695096	40686723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40687147_40694585_40694796_40695011
transcript_56162.known	chr15	-	1151	2	FSM	ENSG00000245849.8	ENST00000499988.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGCTGGGCGTGGTG	-9	True	NA	NA	False	NA	NA	NA	40695107	40693740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40694796_40695011
transcript_56166.known	chr15	-	2246	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	17.095117886565	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-12	True	NA	-16	True	AATAAA	-16	NA	40755254	40735886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_56167.nic	chr15	-	2157	13	NIC	ENSG00000137824.16	novel	2139	14	NA	NA	-28	0	intron_retention	TRUE	canonical	3	31	junction_12	39.3032194044655	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCTCTTTATTCTTACT	NA	False	NA	-17	True	AATAAA	-15	NA	40755282	40735887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
transcript_5617.nnic	chr1	-	1903	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	51	-3	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_4	130.110529935129	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	27	True	NA	-18	True	NA	NA	NA	26960417	26949564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
transcript_56170.nic	chr15	-	1918	4	ISM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	14324	0	-6117	5prime_fragment	FALSE	canonical	3	124	junction_1	11.8415464455544	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTGGGCATGGTGGCAT	-12	True	NA	NA	False	AAGAAA	-21	NA	40755254	40750210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_40751570_40751985_40752179_40754596_40754791_40755082
transcript_56177.known	chr15	+	2059	11	FSM	ENSG00000166140.17	ENST00000564258.5	2059	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.7741801075232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCAGCATCTCATTTC	8	True	NA	24	True	AATAAA	-15	NA	40807088	40814565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807672_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_56179.known	chr15	+	2775	11	FSM	ENSG00000166140.17	ENST00000355341.8	2775	11	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	18.52160900138	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCATCACTTTTGGT	8	True	NA	NA	False	TATAAA	-22	NA	40807088	40815084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_56185.known	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_6	13.6091880727691	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-6	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_56196.known	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	24.2904238612261	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	509	False	NA	28	True	AATAAA	-19	NA	40807589	40814569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_5620.known	chr1	-	1855	4	FSM	ENSG00000175707.10	ENST00000320567.6	1855	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	58.6363558061227	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-24	True	NA	-15	True	NA	NA	NA	26960468	26949561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26950152_26950681_26950757_26951341_26952413_26960349
transcript_56200.nic	chr15	-	1646	10	ISM	ENSG00000104129.10	ENST00000220496.9	3721	11	-60	7799	-55	822	5prime_fragment	FALSE	canonical	3	205	junction_5	14.2984070596848	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAACTCTGGCTACCCT	NA	False	NA	NA	False	NA	NA	NA	40807533	40772959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_56208.known	chr15	-	792	9	FSM	ENSG00000104129.10	ENST00000559310.3	792	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	75.8063940245148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGCGGTGAGTGCTGC	10	True	NA	NA	False	NA	NA	NA	40807457	40774364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40774437_40775030_40775109_40775552_40775597_40776195_40776402_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_5621.nnic	chr1	-	2384	4	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	-591	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	135.775140909111	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	NA	False	NA	-18	True	NA	NA	NA	26961059	26949564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26960408
transcript_56214.known	chr15	+	727	3	FSM	ENSG00000137880.6	ENST00000260447.6	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	20	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	-16	True	NA	16	True	AATAAA	-16	NA	40764067	40767708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40764217_40765826_40765922_40767225
transcript_56215.known	chr15	+	695	3	FSM	ENSG00000137880.6	ENST00000559932.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	263.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGCGGCCCTGGCGCGT	342	False	NA	-50	True	NA	NA	NA	40764425	40767642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40764609_40765826_40765922_40767225
transcript_56216.known	chr15	+	572	2	FSM	ENSG00000137880.6	ENST00000561160.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCAAAGCTAAGCCCTAGAA	20	True	NA	NA	False	NA	NA	NA	40764103	40766285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40764217_40765826
transcript_56217.known	chr15	+	2470	1	FSM	ENSG00000188277.10	ENST00000344320.8	2470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGGAGTGTTATCTGGG	-8	True	NA	20	True	AATAAA	-13	NA	40769979	40772449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40770000_40772400
transcript_56218.known	chr15	+	1486	11	FSM	ENSG00000166140.17	ENST00000561768.5	1486	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.7741801075232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTGGCACTTAGTGG	22	True	NA	-20	True	NA	NA	NA	40807767	40814521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807822_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_56225.nic	chr15	+	2404	11	NIC	ENSG00000166145.15	novel	2978	11	NA	NA	-15	532	combination_of_known_junctions	FALSE	canonical	3	181	junction_1	194.826178939074	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGCTCTGTTCTGTG	6	False	NA	9	True	AATAAA	-14	NA	40844161	40857655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40844279_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_56226.nic	chr15	+	2452	11	NIC	ENSG00000166145.15	novel	3056	11	NA	NA	-15	532	combination_of_known_junctions	FALSE	canonical	3	181	junction_1	217.942744774861	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGCTCTGTTCTGTG	6	False	NA	9	True	AATAAA	-14	NA	40844161	40857655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40844279_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_56240.known	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	55.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	3	True	NA	-1	True	AATAAA	-24	NA	40844387	40835992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40836283_40838542_40838687_40844178
transcript_56241.known	chr15	-	629	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACAAAAATGTTCAGC	-5	True	NA	NA	False	TATAAA	-38	NA	40844332	40835807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40836283_40844178
transcript_56242.known	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	158	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	90	False	NA	73	True	AATAAA	-19	NA	40844300	40838338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40838687_40844178
transcript_56244.known	chr15	+	3056	11	FSM	ENSG00000166145.15	ENST00000344051.8	3056	11	0	0	0	0	multi-exon	TRUE	canonical	3	298	junction_5	165.336142449254	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	7968	False	NA	NA	False	NA	NA	NA	40844017	40858207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_56245.known	chr15	+	2978	11	FSM	ENSG00000166145.15	ENST00000562057.6	2978	11	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_5	129.925209255171	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	2	True	NA	NA	False	NA	NA	NA	40844047	40858207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_56246.known	chr15	-	1650	3	FSM	ENSG00000104140.7	ENST00000220507.5	1650	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	3.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCGTTGTCTCTGTCA	-4	True	NA	-3	True	AATAAA	-17	NA	40874234	40872213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40873502_40873683_40873743_40873931
transcript_56267.nnic	chr15	+	2209	5	NNC	ENSG00000104142.11	novel	3875	5	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	77.6095999216592	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	NA	False	NA	15	True	ATTAAA	-15	NA	40894309	40903975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40899209_40902615
transcript_56268.known	chr15	+	3875	5	FSM	ENSG00000104142.11	ENST00000220509.10	3875	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	13.7363568678162	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	-14	True	NA	15	True	ATTAAA	-15	NA	40894449	40903975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40901015_40902615
transcript_56270.nnic	chr15	+	3979	5	NNC	ENSG00000104142.11	novel	3875	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.9245453773328	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	11	True	NA	15	True	ATTAAA	-15	NA	40894435	40903975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_40894860_40895937_40896170_40898906_40898999_40899143_40901015_40902615
transcript_56274.known	chr15	+	873	4	FSM	ENSG00000104142.11	ENST00000558474.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	86.1097490931711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCCAGGAGCTGCAGCG	3	True	NA	NA	False	NA	NA	NA	40894466	40902861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40902615
transcript_56284.known	chr15	+	3426	11	FSM	ENSG00000128917.8	ENST00000249749.7	3426	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.774596669241483	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTACTTATTGGGTCC	0	True	NA	NA	False	NA	NA	NA	40929339	40939073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40929735_40929846_40930117_40930624_40930683_40931502_40931767_40932170_40932232_40932316_40932448_40934547_40934718_40934897_40935118_40936227_40936931_40937417_40937527_40938028
transcript_56285.known	chr15	+	1520	3	FSM	ENSG00000128965.13	ENST00000617768.5	1520	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	2	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTGTGCCGGAATGT	-2	True	NA	12	True	CATAAA	-13	NA	40953470	40956512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40953815_40954227_40954264_40955372
transcript_56286.known	chr15	-	5991	37	FSM	ENSG00000128908.18	ENST00000401393.7	5991	37	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	15.5196013058119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATGTAAATTGAGGT	-2	True	NA	-13	True	AATAAA	-13	NA	41116153	40978892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40979258_40979491_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
transcript_56287.known	chr15	-	6365	36	FSM	ENSG00000128908.18	ENST00000648947.1	6365	36	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_28	9.88612715900831	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGTGTCTGTGGTCTTT	-25	True	NA	0	True	AATAAA	-26	NA	41116280	40978879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
transcript_5629.known	chr1	-	2382	2	FSM	ENSG00000158246.8	ENST00000289166.6	2382	2	0	0	0	0	multi-exon	TRUE	canonical	3	1162	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGTGCCATGCTTCCTC	5	True	NA	-12	True	AATAAA	-17	NA	27012850	27005019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27006958_27012406
transcript_56290.known	chr15	+	3201	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	2.3629078131263	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTCCATTTTACA	-8	True	NA	NA	False	AATAAA	-21	NA	41231267	41281887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
transcript_56292.known	chr15	+	1088	6	FSM	ENSG00000187446.12	ENST00000560411.5	1088	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	35.0599486594034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTTTCACCAGATGT	-5	True	NA	NA	False	NA	NA	NA	41231139	41279719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41231450_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
transcript_56298.nnic	chr15	+	1518	5	NNC	ENSG00000247556.6	novel	473	5	NA	NA	-31	847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	401.171643439563	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGTATTGGAACATC	4376	False	NA	23	True	AATAAA	-27	NA	41283958	41299628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040_41298788_41299238
transcript_5630.known	chr1	-	4737	12	FSM	ENSG00000090020.11	ENST00000263980.8	4737	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	8.57441899821934	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGGCTGCTTTCTGGG	1	True	NA	NA	False	AATAAA	-22	NA	27155125	27098808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27100645_27101202_27101276_27101724_27101827_27102015_27102131_27102384_27102559_27102672_27102744_27103222_27103313_27105884_27106088_27107647_27107866_27109526_27109778_27113825_27114287_27153982
transcript_56300.known	chr15	+	1384	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	466.77778438996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	33	False	NA	NA	False	AATAAA	-18	NA	41284031	41309737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
transcript_56304.known	chr15	-	1201	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_2	23.8012604708238	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-14	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
transcript_56306.known	chr15	+	1482	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	455.511678103744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	32	False	NA	16	True	AATAAA	-18	NA	41284030	41289155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
transcript_56307.known	chr15	+	8829	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_3	91.2006335260647	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	6	True	NA	36	True	AATAAA	-28	NA	41284004	41306534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
transcript_56311.known	chr15	-	485	4	FSM	ENSG00000104147.9	ENST00000560640.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	208.864123827483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGATCCTGTACCAAA	90	False	NA	NA	False	AATGAA	-39	NA	41332487	41309761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41309850_41313272_41313355_41331914_41331982_41332239
transcript_56313.known	chr15	+	676	3	FSM	ENSG00000247556.6	ENST00000558457.5	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_1	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAGGTGGGCAGATAC	-9	True	NA	NA	False	NA	NA	NA	41283989	41286426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010
transcript_56317.known	chr15	+	2232	11	FSM	ENSG00000137804.14	ENST00000560177.5	2232	11	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	668.855208546663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	36	False	NA	25	True	AATAAA	-22	NA	41332912	41381050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_56318.known	chr15	+	546	5	FSM	ENSG00000137804.14	ENST00000558582.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	996.434487309627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGTTGCAATGGTAC	6	True	NA	NA	False	NA	NA	NA	41332882	41351986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41351963
transcript_56319.known	chr15	+	2256	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	659.193567929785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	9	True	NA	25	True	AATAAA	-22	NA	41332885	41381050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_5632.known	chr1	+	4275	16	FSM	ENSG00000142784.16	ENST00000361771.7	4275	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	25.8874486962312	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGGTGGCATTTGTG	27	True	NA	16	True	ATTAAA	-17	NA	27234667	27308244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27234952_27260955_27261103_27263151_27263236_27282238_27282286_27283337_27283450_27287673_27287862_27292214_27292398_27294021_27294117_27294513_27294630_27296325_27296402_27297050_27297157_27297937_27298112_27301225_27301462_27303620_27303796_27305000_27305194_27306185
transcript_56320.known	chr15	+	821	4	FSM	ENSG00000247556.6	ENST00000561275.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	451.743535894231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGTGTGGT	7	True	NA	NA	False	ACTAAA	-6	NA	41284005	41297290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41296803
transcript_56321.known	chr15	+	5021	18	FSM	ENSG00000137815.15	ENST00000389629.9	5030	18	9	0	9	0	multi-exon	FALSE	canonical	2	383	junction_16	78.3725024160138	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTGAGTCTAAGGATT	NA	False	NA	NA	False	AATAAA	-25	NA	41417103	41483563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770_41464886_41466140_41466253_41470256_41470393_41471171_41471350_41474619_41474703_41475524_41475613_41475711_41475820_41476445_41476524_41477164_41477287_41477457_41477516_41478547_41478626_41479102_41479199_41480213_41480326_41480580
transcript_56324.known	chr15	-	1482	6	FSM	ENSG00000137806.10	ENST00000678745.1	1482	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	58.7761856537152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAACCCAAGGCTTTTT	-3	True	NA	-55	True	NA	NA	NA	41402492	41387469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41387594_41388447_41388523_41394264_41394359_41394858_41395045_41396486_41397141_41402143
transcript_56326.known	chr15	-	1509	5	FSM	ENSG00000137806.10	ENST00000260361.9	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	32.7146756059112	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-7	True	NA	-6	True	AATAAA	-23	NA	41402496	41387352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_56328.known	chr15	-	1364	5	FSM	ENSG00000137806.10	ENST00000560978.2	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	33.4888040992807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTCTCCTGCCTCAGCT	-30	True	NA	NA	False	NA	NA	NA	41402519	41387217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402446
transcript_56334.known	chr15	-	1469	4	FSM	ENSG00000137806.10	ENST00000679240.1	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	59.0987873536054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	29	True	NA	NA	False	NA	NA	NA	41402460	41394046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41394359_41394858_41395045_41396486_41397141_41402143
transcript_56340.known	chr15	+	1825	7	FSM	ENSG00000137825.11	ENST00000260386.7	1825	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCTTCCTGTGCCTCAG	-2	True	NA	5	True	AATAAA	-15	NA	41493873	41503551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41494417_41501462_41501560_41501634_41501852_41501996_41502202_41502401_41502504_41502787_41502860_41502962
transcript_56341.known	chr15	-	2940	19	FSM	ENSG00000062524.16	ENST00000355166.9	2940	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.17720111668984	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATCTGTGGATGCCAGG	NA	False	NA	NA	False	AATAAA	-19	NA	41513879	41503637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41504245_41504341_41504433_41504505_41504641_41504772_41504875_41504971_41505065_41505207_41505306_41505400_41505531_41505712_41505778_41505914_41506006_41507094_41507291_41507561_41507658_41508068_41508222_41509030_41509130_41511421_41511579_41511816_41511964_41512114_41512266_41512706_41512879_41512976_41513121_41513666
transcript_56354.nnic	chr15	-	4647	25	NNC	ENSG00000103932.12	novel	4663	25	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	63.666434881777	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	41544299	41517175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522193_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_56367.known	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_24	29.04115853214	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	3	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_5643.known	chr1	+	994	8	FSM	ENSG00000186501.15	ENST00000486082.5	994	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	114.741235048295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCTCAGAAGCACCCT	-17	True	NA	NA	False	NA	NA	NA	27322253	27335648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_5646.known	chr1	+	1665	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	101.020487471052	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	-24	True	NA	27	True	AATAAA	-15	NA	27322246	27336400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_56461.known	chr15	+	8032	19	FSM	ENSG00000092445.12	ENST00000263798.8	8032	19	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	37.1916956083239	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGGTACATTTTTTT	-13	True	NA	7	True	TATAAA	-20	NA	41559211	41583589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41559382_41561126_41561311_41561538_41561640_41562547_41562719_41564183_41564271_41565025_41565142_41567359_41567538_41568216_41568363_41568877_41569023_41570026_41570157_41570239_41570341_41570603_41570700_41571037_41571119_41571594_41571688_41572442_41572565_41573001_41573112_41573307_41573468_41573678_41573816_41577885
transcript_56472.nic	chr15	+	1390	3	ISM	ENSG00000092445.12	ENST00000263798.8	8032	19	-219	21234	-219	0	5prime_fragment	TRUE	canonical	3	399	junction_1	51.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTAAGGAGCCTGAAAAA	3	True	NA	NA	False	NA	NA	NA	41558992	41562355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41559382_41561126_41561311_41561538
transcript_56473.known	chr15	+	1384	2	FSM	ENSG00000092445.12	ENST00000560992.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTAAGGAGCCTGAAAAA	2	True	NA	NA	False	NA	NA	NA	41559226	41562355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41559382_41561126
transcript_56478.known	chr15	+	3525	9	FSM	ENSG00000174197.18	ENST00000566718.6	3525	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	9.20597631976098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGAGGAAGGCTGCTC	5901	False	NA	-97	True	AAGAAA	-37	NA	41621133	41713359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41621299_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
transcript_56479.known	chr15	+	7888	22	FSM	ENSG00000174197.18	ENST00000570161.6	7888	22	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	17.1004767142579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACAAAAAAGAAAAAAGAAG	255	False	NA	NA	False	AAAACA	-15	NA	41621491	41762194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41621590_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41739905_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128
transcript_5648.known	chr1	+	986	7	FSM	ENSG00000186501.15	ENST00000478104.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	110.46216043917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTCAAGGTGGCCC	14	True	NA	NA	False	NA	NA	NA	27322284	27335824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_56480.nic	chr15	+	3908	9	ISM	ENSG00000174197.18	ENST00000219905.13	12046	24	-313	56467	-305	114	5prime_fragment	FALSE	canonical	3	18	junction_2	5.35607132140714	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAGAAGCTAGAAT	NA	False	NA	17	True	NA	NA	NA	41660091	41713473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
transcript_56484.known	chr15	+	7182	31	FSM	ENSG00000137802.14	ENST00000457542.7	7182	31	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	4.93513480621913	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGATGCCGGCCAGTG	-7	True	NA	32	True	AATAAA	-17	NA	41774483	41827855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41774611_41775166_41775390_41799822_41799915_41810882_41810946_41811177_41811236_41811956_41812128_41812515_41812654_41812918_41813102_41813620_41813782_41814549_41814740_41815258_41815406_41815623_41815800_41816558_41816651_41816909_41817036_41817387_41817459_41817613_41817736_41818008_41818085_41818193_41818306_41818518_41818583_41818822_41818958_41819245_41819380_41819594_41819651_41820831_41821069_41821583_41821751_41821964_41822111_41822224_41822423_41822592_41822678_41822938_41823223_41823446_41824062_41824483_41824570_41825208
transcript_56502.known	chr15	+	3331	25	FSM	ENSG00000168970.22	ENST00000382448.8	3331	25	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_6	38.2573295446623	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGGCGCTGAGACCATC	6	True	NA	20	True	NA	NA	NA	41828115	41848143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41840157_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
transcript_56515.known	chr15	+	1409	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	19.8484050662382	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	-18	True	NA	13	True	AATAAA	-13	NA	41828091	41837581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_56519.known	chr15	+	1192	7	FSM	ENSG00000243789.11	ENST00000408047.5	1192	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	54.6707315561891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCCTGTCAGTAAAG	-8	True	NA	NA	False	NA	NA	NA	41828101	41837452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41828189_41834893_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_5652.known	chr1	+	1511	6	FSM	ENSG00000186501.15	ENST00000608611.5	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	17.0364315512375	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	-23	True	NA	27	True	AATAAA	-15	NA	27322247	27336400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_56526.known	chr15	-	6401	6	FSM	ENSG00000103966.11	ENST00000220325.9	6401	6	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_4	32.9824195595169	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCACTTGAGATTTTAGT	2	True	NA	NA	False	AATAAA	-30	NA	41972557	41895932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41901182_41909698_41909864_41919209_41919623_41943066_41943165_41953763_41953941_41972258
transcript_5653.known	chr1	+	1071	5	FSM	ENSG00000186501.15	ENST00000464813.5	1071	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	15.6584641647896	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAACCCAGACCCCTGG	10	True	NA	NA	False	NA	NA	NA	27322280	27334896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150
transcript_56533.known	chr15	-	2032	3	FSM	ENSG00000103966.11	ENST00000569223.1	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	49.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	7	True	NA	NA	False	NA	NA	NA	41972552	41941603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41943165_41953763_41953941_41972258
transcript_56544.known	chr15	-	4832	25	FSM	ENSG00000166887.16	ENST00000318006.10	4832	25	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	24.3441756666536	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTATTTCTCC	-3	True	NA	NA	False	AATAAA	-27	NA	42208304	42158700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42160830_42161681_42161774_42162031_42162167_42162331_42162482_42163349_42163396_42163625_42163729_42164357_42164487_42164995_42165114_42165717_42165817_42166158_42166233_42166562_42166650_42166771_42166914_42167393_42167538_42169723_42169867_42173722_42173853_42178217_42178339_42178449_42178571_42184516_42184701_42187270_42187364_42187757_42187857_42189113_42189209_42191124_42191168_42191495_42191561_42199895_42199962_42208080
transcript_5656.known	chr1	+	368	4	FSM	ENSG00000186501.15	ENST00000466759.5	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	105.834251964517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTATTGCTGGTTTG	-17	True	NA	NA	False	AATAAA	-16	NA	27322253	27332559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27332446
transcript_56562.known	chr15	-	10396	22	FSM	ENSG00000103994.18	ENST00000564754.7	10396	22	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_18	26.3880856781927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	-13	True	NA	-7	True	AATAAA	-18	NA	42491141	42412822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_56563.known	chr15	-	2964	20	FSM	ENSG00000103978.16	ENST00000389834.9	2964	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	59.2013326195747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATTGTCTTATTTTC	-4	True	NA	NA	False	NA	NA	NA	42273433	42210446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_56566.nic	chr15	-	2311	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	77.1424196443647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTGTTACAGTATGA	NA	False	NA	NA	False	AAGAAA	-11	NA	42273469	42211138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_56567.known	chr15	-	5677	20	FSM	ENSG00000103994.18	ENST00000565380.5	5677	20	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_17	31.7709077886901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATCTAGGAGATAATGA	23	False	NA	NA	False	AAAAAG	-2	NA	42491105	42415120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42466052_42466115_42472235_42472322_42490979
transcript_5657.known	chr1	+	1936	15	FSM	ENSG00000142765.18	ENST00000616558.5	1936	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	29.1044039026848	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	-31	True	NA	NA	False	AATAAA	-18	NA	27342021	27353932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349499_27349651_27349766_27349971_27350133_27350388_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
transcript_56570.known	chr15	-	3049	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.2367830737542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTAGATTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	42273584	42210451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
transcript_56573.known	chr15	-	10460	19	FSM	ENSG00000103994.18	ENST00000263805.8	10460	19	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_18	24.4499993688303	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	0	True	NA	-7	True	AATAAA	-18	NA	42457532	42412822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957
transcript_5658.known	chr1	+	1900	15	FSM	ENSG00000142765.18	ENST00000318074.9	1900	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.8363735007033	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	-31	True	NA	NA	False	AATAAA	-18	NA	27342021	27353932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349115_27349153_27349397_27349499_27349651_27349766_27349971_27350133_27350388_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
transcript_56586.nic	chr15	-	3395	7	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-33	33803	-33	0	5prime_fragment	FALSE	canonical	3	95	junction_3	19.5760624800347	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAATAAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	42491174	42446625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_56595.known	chr15	+	1437	5	FSM	ENSG00000214013.10	ENST00000440615.6	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.517231140958	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAAAAAAACTAGATTT	10	True	NA	105	True	NA	NA	NA	42274241	42284389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42280916_42281134_42283610
transcript_56598.nic	chr15	-	1010	5	ISM	ENSG00000103994.18	ENST00000565380.5	5677	20	-69	31505	-33	0	5prime_fragment	FALSE	canonical	3	45	junction_2	40.5115724207294	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAATAAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	42491174	42446625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42446659_42448071_42448706_42466052_42466115_42472235_42472322_42490979
transcript_56599.nic	chr15	-	1521	5	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-33	38155	-33	689	5prime_fragment	FALSE	canonical	3	95	junction_1	21.1822449235203	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACTGGATCTCTTAAT	NA	False	NA	NA	False	AAAAAG	-4	NA	42491174	42450977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_56603.nic	chr15	-	470	4	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-33	44209	-33	-5365	5prime_fragment	FALSE	canonical	3	96	junction_1	19.9387952383176	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGGAAGAGGAAGAAGA	NA	False	NA	4	True	NA	NA	NA	42491174	42457031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42457159_42466052_42466115_42472235_42472322_42490979
transcript_56605.known	chr15	-	4733	17	FSM	ENSG00000103994.18	ENST00000565500.5	4733	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	37.0134582787126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAATCTAGGAGATAAT	9261	False	NA	NA	False	NA	NA	NA	42448298	42415122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439553_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071
transcript_56606.known	chr15	+	2310	8	FSM	ENSG00000092531.10	ENST00000249647.8	2310	8	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_5	38.4697071388247	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTATTGTTCTTTCAA	-18	True	NA	18	True	ATTAAA	-14	NA	42495633	42533058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
transcript_56610.known	chr15	+	2480	7	FSM	ENSG00000092531.10	ENST00000349777.5	2480	7	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	248.876586997563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATTGTTCTTTCAAA	45	False	NA	19	True	ATTAAA	-15	NA	42495305	42533059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42529674_42529820_42531412
transcript_56615.known	chr15	-	7097	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_5	25.3250863769504	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCAGTATTTGTCTT	-8	True	NA	-11	True	AATAAA	-22	NA	42548793	42537828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
transcript_56622.known	chr15	-	2407	6	FSM	ENSG00000180979.10	ENST00000563454.5	2407	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	40.4405736853472	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGCTGGAAGCAAGG	13	True	NA	64	True	AATAAA	-14	NA	42548772	42542523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548666
transcript_56623.known	chr15	+	626	7	FSM	ENSG00000137814.12	ENST00000564279.5	626	7	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	65.7917590246343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGTGACTGAGACAGA	20	True	NA	NA	False	NA	NA	NA	42548857	42566630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_56624.known	chr15	+	3921	6	FSM	ENSG00000137814.12	ENST00000260372.8	3921	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	22.7033037243481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	0	True	NA	81	True	AATAAA	-21	NA	42548837	42569994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_56626.known	chr15	+	1702	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	55.0022726803175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAT	-10	True	NA	NA	False	AATAAA	-4	NA	42548827	42567858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_56630.known	chr15	-	4657	28	FSM	ENSG00000140326.13	ENST00000356231.4	4657	28	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_26	13.9048303574777	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTCACCTGTCTTCTC	-8	True	NA	NA	False	AATAAA	-33	NA	42737128	42723543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42724617_42725143_42725252_42725488_42725671_42726096_42726161_42726309_42726418_42727620_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210_42731332_42731619_42731826_42732332_42732409_42733096_42733187_42733937_42734048_42734225_42734347_42735099_42735179_42735260_42735375_42735509_42735680_42735874_42736079_42736301_42736781_42737012
transcript_56641.nic	chr15	-	1900	4	NIC	ENSG00000140326.13	novel	4657	28	NA	NA	0	1782	intron_retention	FALSE	canonical	3	39	junction_2	8.17856276425687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGTGGGGGAGTGC	-8	True	NA	NA	False	NA	NA	NA	42737128	42734779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_42735179_42735260_42735375_42735509_42736781_42737012
transcript_56648.known	chr15	-	11208	15	FSM	ENSG00000128881.18	ENST00000267890.11	11208	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10.5745651717425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTAGTCCATTATTCTG	2	True	NA	-14	True	AATAAA	-20	NA	42920778	42738729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42746258_42751973_42753248_42775134_42775724_42777030_42777243_42783418_42783636_42794643_42794802_42810613_42810740_42811687_42811781_42817031_42817098_42827927_42828033_42829937_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42920437
transcript_56652.known	chr15	-	1961	12	FSM	ENSG00000128881.18	ENST00000567840.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	6.27206847660376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCATTTTTGTAACAC	-3	True	NA	NA	False	CATAAA	-18	NA	42920809	42776917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42777243_42783418_42783636_42794643_42794802_42810613_42810740_42811687_42811781_42817031_42817098_42827927_42828033_42829937_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42920437
transcript_56656.known	chr15	+	2707	14	FSM	ENSG00000137842.7	ENST00000260403.7	2707	14	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_4	3.6080121229411	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGAGCCTGAGGCTTG	6	True	NA	NA	False	AATAAA	-23	NA	43133585	43185144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43133983_43134256_43134369_43135511_43135650_43138573_43138620_43146492_43146635_43148754_43148880_43149028_43149152_43151789_43151946_43154671_43154832_43160680_43160795_43169592_43169678_43178606_43178712_43181180_43181300_43184259
transcript_56661.known	chr15	+	1634	12	FSM	ENSG00000166946.14	ENST00000566515.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	96.6299920930392	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAATAAAATGCTAACT	36	False	NA	NA	False	AGTAAA	-32	NA	43185327	43195164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194138_43194414_43194462_43194726
transcript_56665.known	chr15	+	1831	11	FSM	ENSG00000166946.14	ENST00000565296.5	1831	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	76.0702964369142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	18	True	NA	NA	False	AATAAA	-21	NA	43185438	43195195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194462_43194726
transcript_56666.known	chr15	+	3515	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	22.284748147556	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGTTATTCCTT	-18	True	NA	7	True	AATAAA	-20	NA	43185402	43197177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_56667.known	chr15	+	1385	10	FSM	ENSG00000166946.14	ENST00000568507.5	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	76.6710143694763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	18	True	NA	NA	False	AATAAA	-6	NA	43185438	43195180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_56668.known	chr15	+	1450	10	FSM	ENSG00000166946.14	ENST00000563065.5	1450	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	77.6980543792506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	-15	True	NA	NA	False	AATAAA	-21	NA	43185405	43195195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_56671.known	chr15	+	1356	9	FSM	ENSG00000166946.14	ENST00000569745.5	1356	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	78.616851724042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTCTCAATAAAATGCT	-16	True	NA	NA	False	AGTAAA	-28	NA	43185404	43195160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_56675.known	chr15	+	4268	13	FSM	ENSG00000168803.16	ENST00000562188.7	4268	13	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	3.43996124009172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCTTATCATGAAATTC	-13	True	NA	NA	False	NA	NA	NA	43330671	43354569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906_43349046_43350940_43351042_43351750
transcript_56678.known	chr15	+	3514	12	FSM	ENSG00000168803.16	ENST00000428046.7	3514	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	10.3348883571799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCTGAGTTCTGTG	-11	True	NA	14	True	AATAAA	-14	NA	43330673	43353898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906_43349046_43350940_43351042_43351750
transcript_56687.nic	chr15	+	780	3	ISM	ENSG00000168803.16	ENST00000428046.7	3514	12	-370	20465	-368	1050	5prime_fragment	FALSE	canonical	3	52	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTTTTTCCATTTTAA	NA	False	NA	NA	False	AAGAAA	-11	NA	43330303	43333433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_43330860_43331899_43332001_43333310
transcript_56688.known	chr15	-	6179	28	FSM	ENSG00000067369.14	ENST00000450115.6	6179	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	76.3335759336271	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATTTCTTCATCTG	7	True	NA	-7	True	AATAAA	-24	NA	43493127	43407215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413329_43415593_43415810_43416224_43416417_43420304_43420736_43421024_43421175_43421854_43422127_43428015_43428169_43432193_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_567.known	chr1	-	878	2	FSM	ENSG00000188976.11	ENST00000469563.1	878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1476	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCTGGC	3	True	NA	NA	False	AAAAAG	-20	NA	959256	958245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_959082_959214
transcript_56701.known	chr15	+	6812	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	7.21206217599723	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	16	True	NA	NA	False	ATTAAA	-21	NA	43371100	43409771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
transcript_56706.nic	chr15	+	2308	15	ISM	ENSG00000137822.13	ENST00000564079.6	6812	18	-42	7640	-14	-3188	5prime_fragment	TRUE	canonical	3	61	junction_12	7.60269823208598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGGTGTGGTGGCTCGC	1838	False	NA	NA	False	AATACA	-15	NA	43371058	43402131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715
transcript_56709.known	chr15	-	6055	6	FSM	ENSG00000140265.14	ENST00000684362.1	6055	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	37.7783006499763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGTGTTTCTTGAAG	-4	True	NA	-13	True	AATAAA	-16	NA	43371043	43358174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595_43370026_43370557
transcript_56711.known	chr15	-	5595	5	FSM	ENSG00000140265.14	ENST00000396976.6	5595	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	36.1757861006502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCTTGAAGTGT	991	False	NA	-10	True	AATAAA	-19	NA	43370048	43358171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595
transcript_56714.known	chr15	+	10553	7	FSM	ENSG00000166963.13	ENST00000382031.5	10553	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.1091263510296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCTTAGGCTTTTTCT	5	True	NA	17	True	AATAAA	-24	NA	43510957	43531620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43511227_43512189_43512292_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
transcript_56715.known	chr15	+	10266	6	FSM	ENSG00000166963.13	ENST00000300231.6	10266	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.00665927567458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGTAGTGCTGCTTAG	-23	True	NA	8	True	AATAAA	-15	NA	43517607	43531611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43517701_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
transcript_56718.known	chr15	-	5596	30	FSM	ENSG00000168781.23	ENST00000381885.5	5596	30	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_29	6.97097771629248	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGATGTCCTTGTGA	5340	False	NA	1	True	AATAAA	-30	NA	43584864	43533461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43535477_43539469_43539584_43558794_43558933_43564102_43564166_43564866_43564993_43568462_43568554_43571411_43571577_43571723_43571841_43572768_43572877_43573033_43573149_43573356_43573485_43573808_43574033_43574221_43574364_43576370_43576554_43576826_43576949_43577107_43577240_43577452_43577536_43577621_43577732_43577875_43577952_43578069_43578157_43579018_43579121_43581001_43581124_43581226_43581389_43581852_43581955_43582094_43582250_43582563_43582650_43582861_43582953_43583403_43583600_43584357_43584533_43584798
transcript_56719.known	chr15	+	1779	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	47.0885690304275	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43593053	43599406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_56720.known	chr15	+	1579	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	16.1844833096395	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	927	False	NA	20	True	AGTAAA	-20	NA	43594026	43599406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_56727.known	chr15	+	1779	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	46.2649375277266	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	17	True	AGTAAA	-20	NA	43692885	43699222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_56730.known	chr15	+	1579	9	FSM	ENSG00000223572.10	ENST00000413453.7	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	7.46659226153404	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	959	False	NA	17	True	AGTAAA	-20	NA	43693858	43699222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_56734.known	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7091	junction_4	378.359910960744	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	9	True	NA	8	True	AGTAAA	-19	NA	43746437	43773278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
transcript_56783.known	chr15	-	1755	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.21279489577087	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTCTGTGTCCTT	18	True	NA	-31	True	ATTAAA	-2	NA	43776966	43772619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
transcript_56805.known	chr15	+	1931	5	FSM	ENSG00000140264.21	ENST00000381359.5	1931	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4784.54466877466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCGTGTGCCCAGGGCT	7	True	NA	51	True	NA	NA	NA	43777099	43794595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43777503_43785409_43785535_43791975_43792384_43792974_43793084_43793709
transcript_56810.known	chr15	+	586	3	FSM	ENSG00000140264.21	ENST00000402131.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	5333.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	32	False	NA	-1	True	NA	NA	NA	43792367	43793975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43792579_43792974_43793084_43793709
transcript_56812.known	chr15	+	690	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	5328.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	32	False	NA	28	True	ATTAAA	-17	NA	43792367	43794046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43792612_43792974_43793084_43793709
transcript_56816.known	chr15	+	2107	14	FSM	ENSG00000167004.14	ENST00000434494.5	2107	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2837.880747335	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCCACCAGATTGAG	24	False	NA	31	True	AATAAA	-21	NA	43746452	43771545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43746707_43751583_43751759_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
transcript_56817.known	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	3881.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	11	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43792384_43792974_43793084_43793686
transcript_56818.known	chr15	+	582	2	FSM	ENSG00000140264.21	ENST00000409614.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	10706	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	503	False	NA	28	True	ATTAAA	-17	NA	43792838	43794046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43793084_43793709
transcript_56819.known	chr15	-	2043	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_3	18.0329559418305	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTCACATTTTGA	18	True	NA	-3	True	ATTAAA	-25	NA	43824690	43804491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
transcript_5682.known	chr1	-	4438	29	FSM	ENSG00000142733.17	ENST00000357582.3	4438	29	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_27	8.91999588175983	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCTGGCAATTTTG	-10	True	NA	-6	True	ATTAAA	-16	NA	27366961	27355183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364660_27364685_27364772_27364913_27366257
transcript_56826.nic	chr15	-	562	3	ISM	ENSG00000140259.7	ENST00000267812.4	2043	9	-39	10480	-39	-10066	5prime_fragment	FALSE	canonical	3	345	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGGAAATTGA	-21	True	NA	-13	True	NA	NA	NA	43824729	43814971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_43815075_43817228_43817449_43824490
transcript_56827.known	chr15	+	3932	13	FSM	ENSG00000092470.12	ENST00000263795.11	3932	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_10	10.295630140987	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCTCACTTTTGTGG	7	True	NA	27	True	AATAAA	-16	NA	43827001	43868412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_56829.known	chr15	+	2586	13	FSM	ENSG00000092470.12	ENST00000381246.6	2586	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	38.4587621861246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATTCTATAGTA	-15	True	NA	30	True	ATTAAA	-20	NA	43826979	43867018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43827119_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_56832.known	chr15	-	5051	14	FSM	ENSG00000171877.21	ENST00000417257.6	5051	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	7.37579601561115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGAGTGGGCTCTTTCT	-5	True	NA	-4	True	AATAAA	-14	NA	44195271	43870763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204_43924310_44194952
transcript_56834.known	chr15	-	2042	14	FSM	ENSG00000171877.21	ENST00000449926.5	2042	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.0221688716595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTCTGAGTTGGATTT	NA	False	NA	0	True	ATTAAA	-18	NA	43924309	43873274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43873940_43874118_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204
transcript_56835.known	chr15	+	3974	10	FSM	ENSG00000166734.20	ENST00000299957.11	3974	10	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_9	37.2273628291056	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTGCTGATTCT	-7	True	NA	11	True	AATAAA	-18	NA	44288718	44415758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44402886_44403055_44413335
transcript_56836.known	chr15	+	3764	9	FSM	ENSG00000166734.20	ENST00000345795.6	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	54.5067369689289	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTTTTGCTGATTC	-6	True	NA	10	True	AATAAA	-17	NA	44288759	44415757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44413335
transcript_56839.known	chr15	+	6433	13	FSM	ENSG00000137770.14	ENST00000260327.9	6433	13	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_11	29.48964036554	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	7	True	NA	15	True	AATAAA	-16	NA	44427628	44529038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
transcript_56851.known	chr15	-	1408	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	NA	False	NA	-6	True	AATAAA	-19	NA	44536922	44534504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44536042_44536359_44536800
transcript_56854.known	chr15	-	2863	2	FSM	ENSG00000179523.6	ENST00000313807.5	2873	2	10	0	-1	0	multi-exon	FALSE	canonical	3	68	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	44536923	44533492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44536042
transcript_56856.known	chr15	-	570	2	FSM	ENSG00000179523.6	ENST00000558323.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGATTGGAAGGAGGCA	939	False	NA	NA	False	NA	NA	NA	44535943	44535088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44535759
transcript_5686.known	chr1	-	4309	28	FSM	ENSG00000142733.17	ENST00000374040.7	4309	28	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_26	9.61836948500465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGTCCTGGCAATTT	7965	False	NA	-8	True	ATTAAA	-14	NA	27366858	27355185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364772_27364913_27366257
transcript_56860.known	chr15	+	2479	8	FSM	ENSG00000104131.13	ENST00000261868.10	2479	8	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_6	87.3248684686168	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGGTACAGGTATTCT	-15	True	NA	21	True	ATTAAA	-18	NA	44537146	44562803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_56866.known	chr15	+	925	7	FSM	ENSG00000104131.13	ENST00000535391.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	235.242191982835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGCAACGTGACAAAAAA	21	True	NA	NA	False	ACTAAA	-13	NA	44537182	44561447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44560248_44560323_44561017
transcript_56868.nic	chr15	+	381	4	ISM	ENSG00000104131.13	ENST00000535391.5	925	7	-140	9990	-82	-3117	5prime_fragment	FALSE	canonical	3	607	junction_3	34.7978287956144	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGCAGAGAAGATAAAAGAG	9755	False	NA	-3	True	AAGAAA	-5	NA	44537042	44551457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430
transcript_56869.nic	chr15	+	436	3	ISM	ENSG00000104131.13	ENST00000535391.5	925	7	-222	10517	-164	-3644	5prime_fragment	FALSE	canonical	3	655	junction_1	18.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCACTGGGGCGCCTC	9673	False	NA	NA	False	AGTAAA	-6	NA	44536960	44550930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44537238_44537323_44537428_44550875
transcript_56871.known	chr15	+	943	4	FSM	ENSG00000166710.22	ENST00000648006.3	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	2439	junction_2	62.8242699033494	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	0	True	NA	14	True	AATAAA	-14	NA	44711516	44718145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44711614_44715422_44715702_44716328_44716357_44717606
transcript_56872.known	chr15	+	1081	3	FSM	ENSG00000166710.22	ENST00000559916.1	1081	3	0	0	0	0	multi-exon	FALSE	canonical	3	2439	junction_2	72	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAACAGGGAATTGATT	-4	True	NA	NA	False	NA	NA	NA	44711512	44717029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44711614_44715422_44715702_44716328
transcript_56877.known	chr15	+	3190	2	FSM	ENSG00000185880.13	ENST00000560141.2	3190	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATGGATGTTGTGAG	1	True	NA	2	True	AATAAA	-12	NA	44729000	44734000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44729553_44731362
transcript_56882.known	chr15	+	4758	9	FSM	ENSG00000140263.15	ENST00000674405.1	4758	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	125.049927528967	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTTGCATATTTTTGT	-24	True	NA	NA	False	AATAAA	-14	NA	45023167	45077172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45068979_45072316_45072439_45073364
transcript_56885.known	chr15	+	4818	9	FSM	ENSG00000140263.15	ENST00000267814.14	4818	9	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_7	28.1247222208505	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTCCTGACTCAT	3	True	NA	NA	False	AATAAA	-27	NA	45023194	45077185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45069053_45072316_45072439_45073364
transcript_5689.known	chr1	-	1457	5	FSM	ENSG00000174950.11	ENST00000374027.7	1457	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.56195171219375	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	29	False	NA	-4	True	AATAAA	-17	NA	27383303	27379175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_56893.known	chr15	+	5483	34	FSM	ENSG00000137857.18	ENST00000389037.7	5483	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16183572804126	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGGTTTCTTTATTCTG	2	True	NA	NA	False	AATAAA	-14	NA	45129993	45165574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45130099_45131917_45132025_45133863_45133948_45134144_45134310_45135103_45135292_45135473_45135676_45135781_45135949_45136349_45136411_45136528_45136626_45137923_45138015_45139065_45139169_45139426_45139600_45140894_45141071_45141291_45141411_45141974_45142113_45143189_45143304_45144035_45144236_45144894_45145081_45147432_45147659_45147903_45147998_45148271_45148448_45150631_45150702_45151122_45151249_45151873_45152053_45152285_45152517_45153379_45153480_45153950_45154001_45155801_45155930_45160836_45160991_45161737_45161971_45162218_45162378_45163531_45163688_45163789_45163919_45164778
transcript_56894.nic	chr15	-	2089	6	NIC	ENSG00000138606.20	novel	2215	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	37.5712656161594	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	NA	False	NA	-4	True	TATAAA	-39	NA	45187981	45167213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_45168134_45171882_45172003_45172146_45172319_45175218_45175426_45178164_45178307_45187453
transcript_56895.known	chr15	-	2062	6	FSM	ENSG00000138606.20	ENST00000560540.5	2062	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	38.4582890935101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	8	True	NA	-4	True	TATAAA	-39	NA	45187956	45167213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_45168134_45171882_45172003_45172148_45172319_45175218_45175426_45178164_45178307_45187453
transcript_56902.known	chr15	-	1731	4	FSM	ENSG00000138606.20	ENST00000560734.5	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.4935094712953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCTGGAGCAGACACAG	12	False	NA	-41	True	TATAAA	-2	NA	45187952	45167250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_45168134_45175218_45175426_45178164_45178307_45187453
transcript_56904.known	chr15	-	2348	9	FSM	ENSG00000171766.17	ENST00000396659.8	2348	9	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	18.6949190958399	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATTGGTCTAGTCAT	0	True	NA	-5	True	AATAAA	-21	NA	45378544	45361123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_45362222_45363899_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
transcript_56905.known	chr15	-	2142	9	FSM	ENSG00000171766.17	ENST00000675158.1	2142	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.8781901607691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGATAGATACACTGCAT	316	False	NA	NA	False	NA	NA	NA	45378512	45361313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_45362222_45363899_45364033_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
transcript_56910.known	chr15	+	2561	8	FSM	ENSG00000171763.20	ENST00000305560.11	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	10.8062717994728	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTGTGTGTGTTGAT	-11	True	NA	NA	False	AATAAA	-18	NA	45402335	45421415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415780_45417268_45417400_45418556_45418683_45421042
transcript_56913.known	chr15	+	2464	8	FSM	ENSG00000171763.20	ENST00000531970.5	2464	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	21.9805108480867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAAACT	-24	True	NA	NA	False	AATAAA	-7	NA	45402374	45421327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415810_45417268_45417400_45418556_45418683_45421042
transcript_56915.known	chr15	+	1701	10	FSM	ENSG00000137767.14	ENST00000260324.12	1701	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.415739709641549	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTTCTATGAGAAAATT	-21	True	NA	28	True	AATAAA	-44	NA	45635028	45691281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45635109_45658906_45659158_45661954_45662126_45669927_45669982_45673606_45673802_45676100_45676311_45682477_45682662_45688336_45688405_45689038_45689218_45690972
transcript_56916.known	chr15	+	1839	5	FSM	ENSG00000104164.12	ENST00000567523.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	44.2627100390385	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAATT	2	True	NA	NA	False	NA	NA	NA	45587378	45607773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587526_45592134_45592277_45603103_45603188_45605427_45605515_45606394
transcript_56918.known	chr15	+	3838	5	FSM	ENSG00000104164.12	ENST00000565323.6	3838	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	48.5669640805352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	0	True	NA	12	True	AATAAA	-15	NA	45587589	45609708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587797_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_5692.nnic	chr1	+	2087	3	NNC	ENSG00000181773.7	novel	2137	2	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	784	False	NA	NA	False	AATAAA	-19	NA	27392592	27395814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_27392738_27393793_27395411_27395489
transcript_56920.known	chr15	+	592	4	FSM	ENSG00000104164.12	ENST00000568597.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	55.7275116576683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATATGTTGAAATCCT	-1	True	NA	NA	False	NA	NA	NA	45587375	45606607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587526_45592134_45592277_45605427_45605515_45606394
transcript_56921.known	chr15	+	1051	3	FSM	ENSG00000104164.12	ENST00000567740.5	1051	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGATACTCTTTATTA	NA	False	NA	NA	False	NA	NA	NA	45587213	45607046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587526_45605427_45605515_45606394
transcript_56922.nic	chr15	+	1566	2	ISM	ENSG00000104164.12	ENST00000566753.5	1996	3	-119	6152	0	-6152	5prime_fragment	FALSE	canonical	3	118	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTGGGTTATTCTAAGA	0	True	NA	NA	False	AAAAAG	-2	NA	45587235	45593410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_45587526_45592134
transcript_56925.known	chr15	+	6099	19	FSM	ENSG00000137872.17	ENST00000316364.9	6099	19	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	9.65084912786895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTCTTGATATTGAA	214	False	NA	12	True	AATAAA	-18	NA	47718488	47774223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_47718874_47759744_47759908_47760303_47760416_47760977_47761039_47761157_47761221_47761329_47761432_47761660_47761752_47762199_47762320_47763015_47763105_47763849_47764068_47764173_47764306_47764637_47764794_47764882_47765057_47765868_47766010_47766104_47766183_47766615_47766678_47767036_47767094_47768580_47768749_47770496
transcript_56928.known	chr15	+	2318	13	FSM	ENSG00000137872.17	ENST00000389425.7	2318	13	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	9.48976056365784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAATAAGA	186	False	NA	NA	False	NA	NA	NA	47718460	47765480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_47718874_47759744_47759908_47760303_47760416_47760977_47761039_47761157_47761221_47761329_47761432_47761660_47761752_47762199_47762320_47763015_47763105_47763849_47764068_47764173_47764306_47764637_47764794_47764882
transcript_56931.nic	chr15	+	1515	3	ISM	ENSG00000074803.21	ENST00000560692.5	8632	22	74832	0	66433	0	3prime_fragment	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGCCTAGGTCATG	NA	False	NA	12	True	AATAAA	-16	NA	48299157	48304078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_48299276_48301314_48301383_48302749
transcript_56935.known	chr15	-	10137	17	FSM	ENSG00000104177.19	ENST00000324324.12	10137	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	50.7689311981255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTAGTGCCCTGTTGTCC	19	True	NA	-5	True	AATAAA	-15	NA	48178295	48134631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
transcript_5694.known	chr1	+	2137	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	-4	True	NA	NA	False	AATAAA	-19	NA	27392621	27395814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27392738_27393793
transcript_56940.known	chr15	-	2958	16	FSM	ENSG00000104177.19	ENST00000267836.10	2958	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	51.3964979351706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTTATTTGTTGCTTT	-1	True	NA	NA	False	ATTAAA	-19	NA	48178353	48141796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
transcript_56955.known	chr15	+	635	7	FSM	ENSG00000128951.14	ENST00000559416.5	635	7	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	747.538404810527	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCTTCAAGTGTTTT	0	True	NA	NA	False	AAAACA	-36	NA	48331094	48342137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_56957.known	chr15	+	769	7	FSM	ENSG00000128951.14	ENST00000558813.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	747.175440501686	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTTTCCGCAATTG	-32	True	NA	-84	True	ATTAAA	-45	NA	48331404	48342293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331480_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_56960.known	chr15	+	2141	7	FSM	ENSG00000128951.14	ENST00000331200.8	2141	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	684.17868442551	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGAATTCTGTTTTG	-8	True	NA	NA	False	AATAAA	-27	NA	48331428	48343373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331796_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_56962.known	chr15	+	724	7	FSM	ENSG00000128951.14	ENST00000558472.5	724	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	765.698519145899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGTTCCACTGGAAAG	19	True	NA	NA	False	NA	NA	NA	48331455	48342052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331727_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_56964.known	chr15	+	1935	6	FSM	ENSG00000128951.14	ENST00000455976.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1864	junction_5	185.699326870078	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	666	False	NA	NA	False	AATAAA	-23	NA	48332102	48343369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_56968.known	chr15	+	1441	4	FSM	ENSG00000128951.14	ENST00000559540.5	1441	4	0	0	0	0	multi-exon	FALSE	canonical	3	1883	junction_3	188.011228979075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCCTGTATTTA	19	True	NA	18	True	NA	NA	NA	48332209	48342395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288
transcript_56972.known	chr15	+	569	6	FSM	ENSG00000128951.14	ENST00000559935.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	1026.15488109739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTCTTTCTTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	48331010	48341495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341458
transcript_56973.known	chr15	-	4109	2	FSM	ENSG00000166147.15	ENST00000560355.1	4109	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGACTTTCAATTCA	-10	True	NA	NA	False	AATAAA	-13	NA	48645721	48640988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48644951_48645574
transcript_56975.known	chr15	-	5560	27	FSM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	13.1944941000484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTATGAATTATTTT	2	True	NA	-1	True	AATAAA	-18	NA	48811069	48737937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_56978.known	chr15	-	1947	13	FSM	ENSG00000103995.14	ENST00000560322.5	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.49853789918334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGATGAAAAAAGCATTG	NA	False	NA	NA	False	AAGAAA	-24	NA	48811146	48772514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_56981.known	chr15	+	2040	1	FSM	ENSG00000255302.5	ENST00000530028.3	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAATTCAGAGCCTTA	7	True	NA	3	True	AGTAAA	-20	NA	48878133	48880173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48878100_48880200
transcript_5699.known	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	42.537483470464	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-14	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_56994.known	chr15	+	5299	10	FSM	ENSG00000156958.15	ENST00000327171.7	5299	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	19.715256986017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	-30	True	NA	6	True	AATAAA	-18	NA	49155764	49331882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_56995.known	chr15	+	5176	10	FSM	ENSG00000156958.15	ENST00000560031.6	5176	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.6599311133072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	-18	True	NA	6	True	AATAAA	-18	NA	49170246	49331882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_56998.known	chr15	+	1834	10	FSM	ENSG00000156958.15	ENST00000396509.6	1834	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	24.4313096024116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	-13	True	NA	11	True	ATTAAA	-22	NA	49170203	49328514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49170359_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_56999.known	chr15	-	6576	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.875257746861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAAGTATTTACTGTG	0	True	NA	NA	False	AATAAA	-15	NA	49155599	49122726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_57.known	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00162_+_0_500
transcript_57000.known	chr15	-	2036	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	120.91258895031	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	NA	False	NA	-6	True	AATAAA	-17	NA	49155661	49127349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_57018.nic	chr15	+	1303	6	NIC	ENSG00000104047.15	novel	1201	6	NA	NA	-110	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_2	160.671839474128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATATATAATGCCTGT	5381	False	NA	31	True	AATAAA	-33	NA	49620926	49643657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535_49634795_49643330
transcript_57020.known	chr15	+	13776	6	FSM	ENSG00000104047.15	ENST00000251250.7	13776	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	158.108064310458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	47	False	NA	NA	False	AATAAA	-20	NA	49621098	49656232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49621123_49623670_49623799_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_57022.known	chr15	+	13699	5	FSM	ENSG00000104047.15	ENST00000403028.8	13699	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	36.4717356318561	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	-4	True	NA	NA	False	AATAAA	-20	NA	49621047	49656232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_57025.known	chr15	+	2384	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	6.8168274000791	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	-2	True	NA	10	True	ATTAAA	-18	NA	50182195	50236385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
transcript_57026.known	chr15	+	2181	9	FSM	ENSG00000140284.11	ENST00000380902.8	2181	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.6377618123074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGAGATGGCACTGTCT	4	True	NA	3	True	ATTAAA	-11	NA	50182232	50236378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50182906_50197499_50197710_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
transcript_57027.known	chr15	-	2405	12	FSM	ENSG00000140287.11	ENST00000267845.8	2405	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.77138921583987	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCCTGTGTCACTTAAT	5	True	NA	NA	False	AATAAA	-24	NA	50265726	50241946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50243007_50243142_50243245_50248244_50248344_50252429_50252521_50252611_50252775_50253599_50253667_50254129_50254274_50254529_50254665_50257424_50257548_50258403_50258518_50263234_50263408_50265592
transcript_57031.nic	chr15	-	2776	10	NIC	ENSG00000104064.18	novel	4609	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	88.4292281718083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	181	False	NA	-16	True	ATTAAA	-10	NA	50355215	50277262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_57033.known	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	56.6545176927666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	6	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_57034.known	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	43.1637507058875	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-8	True	NA	NA	False	AATAAA	-17	NA	50355198	50275388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_57038.known	chr15	-	1412	9	FSM	ENSG00000104064.18	ENST00000560825.5	1412	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	99.3164135478119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATGAATGAATGAGTG	-12	True	NA	-24	True	AATAAA	-6	NA	50355202	50285893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_57040.known	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	56.8976883429855	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	6	True	NA	-10	True	AATAAA	-20	NA	50355153	50285879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_57041.known	chr15	-	1401	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	39.7199379328286	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-8	True	NA	-10	True	AATAAA	-20	NA	50355198	50285879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_57042.known	chr15	+	2277	3	FSM	ENSG00000244879.9	ENST00000648591.1	2277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCATCTCACTTTCAG	-2	True	NA	NA	False	AATATA	-3	NA	50355475	50372158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355766_50356099_50356258_50370329
transcript_57045.known	chr15	+	709	2	FSM	ENSG00000244879.9	ENST00000560359.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGGCTGTGTTTTCTTTT	55	False	NA	11	True	ATTAAA	-36	NA	50355327	50356370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355766_50356099
transcript_57047.known	chr15	+	16182	2	FSM	ENSG00000244879.9	ENST00000499624.3	16182	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACTTGTCTTTGTCCT	-11	True	NA	NA	False	CATAAA	-17	NA	50355466	50372202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355546_50356099
transcript_57049.known	chr15	+	1076	1	FSM	ENSG00000244879.9	ENST00000619314.1	1076	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAACTTAATCTAG	-5	True	NA	NA	False	AAGAAA	-43	NA	50354958	50356034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355000_50356000
transcript_57050.known	chr15	+	1098	2	FSM	ENSG00000244879.9	ENST00000668321.1	1098	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	-18	True	NA	16	True	ATTAAA	-19	NA	50355459	50371343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355546_50370331
transcript_57054.known	chr15	+	18865	20	FSM	ENSG00000138592.14	ENST00000307179.9	18865	20	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	54.9065183905595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTGTCTCATACCTGT	1	True	NA	NA	False	AATAAA	-17	NA	50424404	50514421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_57058.nic	chr15	+	1878	12	NIC	ENSG00000138592.14	novel	1917	12	NA	NA	0	75	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	84.1622792954085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAGCTGAAGAAAATGA	-22	True	NA	NA	False	AAAAAG	-12	NA	50424381	50481780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_57060.known	chr15	+	1917	12	FSM	ENSG00000138592.14	ENST00000559329.5	1917	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	87.2418505985961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCGGGAAAGGCAGCA	1	True	NA	NA	False	AAGAAA	-3	NA	50424404	50481702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424655_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_57063.nic	chr15	+	1715	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-22	32641	1	75	5prime_fragment	FALSE	canonical	3	132	junction_1	48.9893866056721	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAGCTGAAGAAAATGA	-21	True	NA	NA	False	AAAAAG	-12	NA	50424382	50481780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_57064.nic	chr15	+	1788	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-40	32586	-15	130	5prime_fragment	FALSE	canonical	3	132	junction_1	48.9893866056721	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAAGAAAGAAAGTGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	50424364	50481835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_57066.known	chr15	+	19026	20	FSM	ENSG00000138592.14	ENST00000396444.7	19026	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	62.7604159171542	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGTGTCTCATACCT	-22	True	NA	NA	False	AATAAA	-15	NA	50424381	50514419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_57068.known	chr15	+	1568	10	FSM	ENSG00000138592.14	ENST00000625664.2	1568	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.6214484191256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAGAAAAA	23	True	NA	NA	False	AAGAAA	-37	NA	50424426	50481682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424655_50439008_50439178_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_57073.known	chr15	+	652	5	FSM	ENSG00000138592.14	ENST00000560297.5	652	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	117.616697369039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCGAAGAAGCTGAAA	-24	True	NA	NA	False	NA	NA	NA	50424379	50449440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399
transcript_57074.known	chr15	-	10382	39	FSM	ENSG00000092439.16	ENST00000646667.1	10382	39	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_15	21.4800203500422	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATCAAGTAATTATTT	-6	True	NA	NA	False	AATAAA	-21	NA	50686797	50557157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583160_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
transcript_57081.nic	chr15	-	2034	16	NIC	ENSG00000138600.10	novel	7270	15	NA	NA	-18	-129	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	38.7053829159029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCGAGATGTACTATAT	217	False	NA	-18	True	AATAAA	-17	NA	50765727	50707576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726072_50726127_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
transcript_57083.known	chr15	-	7270	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	20.2208469916872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTGTTTTATTTTG	-19	True	NA	NA	False	AATAAA	-19	NA	50765706	50702265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
transcript_57084.known	chr15	+	6743	21	FSM	ENSG00000081014.11	ENST00000261842.10	6743	21	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_11	11.4568756648573	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGGTCTATGTTC	-22	True	NA	11	True	AATAAA	-17	NA	50908682	51005895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50908929_50912077_50912150_50915447_50915572_50923930_50924005_50925097_50925220_50929008_50929169_50930804_50930972_50934623_50934698_50941441_50941565_50941665_50941776_50948019_50948160_50949825_50949939_50950050_50950170_50958491_50958795_50968262_50968378_50984021_50984146_50993369_50993626_50997325_50997884_50999071_50999263_51001025_51001184_51002501
transcript_57087.known	chr15	-	10596	44	FSM	ENSG00000104093.14	ENST00000560891.6	10596	44	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_35	8.19344274748086	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTTTGATACTGTT	-11	True	NA	-18	True	AATAAA	-15	NA	51622771	51447790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51449194_51450128_51450347_51451644_51451698_51453549_51453642_51455150_51455229_51456065_51456194_51456308_51456370_51457327_51457467_51458505_51458628_51458708_51458796_51459597_51459661_51463378_51463497_51464674_51464877_51465565_51465652_51466183_51466312_51471222_51471402_51474343_51474593_51476588_51476720_51478270_51478348_51479947_51480140_51480541_51481624_51486072_51486338_51487953_51488120_51488547_51488646_51491577_51491748_51495023_51495135_51498551_51500232_51502805_51503034_51507133_51507254_51514441_51514560_51517077_51517168_51535662_51535785_51536165_51536863_51537487_51537760_51538212_51538453_51542332_51542508_51545582_51545767_51547229_51547409_51563380_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
transcript_57089.known	chr15	+	3160	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_6	36.5450022586214	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	6	True	NA	18	True	AATAAA	-16	NA	51681502	51721026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_5709.nic	chr1	-	769	5	ISM	ENSG00000158195.11	ENST00000536657.1	1083	8	-141	7806	-25	-7806	5prime_fragment	FALSE	canonical	3	424	junction_2	23.9687296284138	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAGAAAGCATAGGGT	NA	False	NA	-18	True	NA	NA	NA	27490192	27416002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_57095.nic	chr15	+	903	7	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	218	28690	189	0	5prime_fragment	FALSE	canonical	3	486	junction_6	45.5427149925088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCACTGTGTGGTTGTG	12	True	NA	7	True	NA	NA	NA	51681720	51692336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158
transcript_57097.nic	chr15	+	524	4	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	-12	37730	-1	-9040	5prime_fragment	TRUE	canonical	3	568	junction_3	19.7033556081755	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGAAAGAAAGACAATCT	-6	True	NA	NA	False	NA	NA	NA	51681490	51683296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218
transcript_57098.known	chr15	-	1277	3	FSM	ENSG00000140280.14	ENST00000267838.7	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAATGCTGACAGCTT	-14	True	NA	54	True	AATAAA	-19	NA	51737655	51723010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51723650_51724789_51725122_51737349
transcript_57099.known	chr15	-	1228	3	FSM	ENSG00000140280.14	ENST00000454181.6	1228	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTCCTTTTTTTTT	638	False	NA	-4	True	AATAAA	-41	NA	51751585	51723068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51723650_51724789_51725122_51751270
transcript_57102.known	chr15	+	8232	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	24.5633471801251	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTTTTTGAAAAAGC	-17	True	NA	16	True	AATAAA	-22	NA	51829652	51915725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
transcript_57107.nic	chr15	+	557	3	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-17	46353	8	6389	5prime_fragment	FALSE	canonical	3	320	junction_2	10	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCCCCAGAATTTTAA	5	True	NA	NA	False	CATAAA	-40	NA	51829635	51869372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_51829837_51862810_51863011_51869216
transcript_57108.known	chr15	+	5330	6	FSM	ENSG00000069956.14	ENST00000261845.7	5330	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_3	34.5681934731915	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTCCACTTGCAATC	-17	True	NA	6	True	AATAAA	-19	NA	52019218	52067375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_52019377_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
transcript_57113.known	chr15	-	2165	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_10	46.3167320675961	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-12	True	NA	-1	True	AATAAA	-16	NA	51971778	51938024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_57116.known	chr15	-	1981	10	FSM	ENSG00000166477.13	ENST00000315141.5	1981	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	161.756179876984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTCTATGTTTAAGAAA	-10	True	NA	-3	True	AATAAA	-14	NA	51971776	51938026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_57118.nic	chr15	-	1672	9	ISM	ENSG00000166477.13	ENST00000299601.10	2165	12	-36	13827	-36	1363	5prime_fragment	FALSE	canonical	3	386	junction_7	45.3265926361115	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAAGGTATGTTTGCTA	104	False	NA	-8	True	NA	NA	NA	51971814	51951851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_57119.nic	chr15	-	1347	7	ISM	ENSG00000166477.13	ENST00000299601.10	2165	12	-36	16518	-36	-1328	5prime_fragment	FALSE	canonical	3	386	junction_5	44.0482689784741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAGAAGGAAATGAAAT	104	False	NA	NA	False	NA	NA	NA	51971814	51954542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_57121.known	chr15	-	6977	41	FSM	ENSG00000128833.13	ENST00000261839.12	6977	41	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_22	15.7559314228007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGTCAGATTCTTT	-23	True	NA	NA	False	AATAAA	-14	NA	52295804	52192321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52194055_52195376_52195458_52196308_52196484_52204864_52205148_52205815_52205967_52208553_52208644_52211729_52211885_52213187_52213287_52214602_52214691_52218518_52218688_52219758_52219823_52221161_52221256_52223543_52223725_52224900_52224982_52225074_52225139_52225438_52225533_52229132_52229314_52232621_52232686_52235669_52235764_52237481_52237647_52239732_52239880_52242047_52242214_52244355_52244568_52245353_52245466_52245955_52246043_52246916_52247015_52247457_52247593_52248699_52248784_52251389_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_57127.nic	chr15	-	3000	13	ISM	ENSG00000128833.13	ENST00000261839.12	6977	41	-6	57904	-6	765	5prime_fragment	FALSE	canonical	3	47	junction_3	14.9833240637717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTTTAGTGCTTAG	-29	True	NA	NA	False	AAAAAG	-23	NA	52295810	52250225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_57128.known	chr15	-	2129	13	FSM	ENSG00000128833.13	ENST00000559459.5	2129	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.7502805820235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATAATGGGTTATCTTC	37	False	NA	-4	True	ATTAAA	-38	NA	52295744	52250990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52251516_52253316_52253458_52256638_52256721_52260901_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_57129.nic	chr15	-	2235	13	ISM	ENSG00000128833.13	ENST00000261839.12	6977	41	-6	58669	-6	0	5prime_fragment	FALSE	canonical	3	47	junction_3	14.9833240637717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATAATGGGTTATCTTC	-29	True	NA	-4	True	ATTAAA	-38	NA	52295810	52250990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_57137.known	chr15	-	1735	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	17.6022725805505	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCTATTGTCTTTT	372	False	NA	-6	True	NA	NA	NA	52180001	52122205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
transcript_5714.nnic	chr1	-	2299	3	NNC	ENSG00000158195.11	novel	5681	9	NA	NA	-25	-1370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	240.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCTTTAGACCCAGAGC	NA	False	NA	37	True	NA	NA	NA	27490192	27405599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_27407667_27428908_27428934_27489985
transcript_57144.known	chr15	-	2678	9	FSM	ENSG00000069966.19	ENST00000396335.8	2678	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.8552820240743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCATTTGCAGAGCAG	49	True	NA	-19	True	AATAAA	-14	NA	52179887	52120938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52149883_52149926_52153939_52154077_52179767
transcript_57149.known	chr15	+	2554	3	FSM	ENSG00000259577.2	ENST00000654724.1	2554	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTCAGGAGTTCAAGAC	523	False	NA	NA	False	NA	NA	NA	52180027	52206915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_52180402_52181049_52181203_52204888
transcript_57150.known	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	36	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52149926_52153939_52154077_52179767
transcript_57151.known	chr15	+	1972	2	FSM	ENSG00000259577.2	ENST00000560518.1	1972	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATCACTGAGAATCTG	712	False	NA	NA	False	AATAAA	-20	NA	52180216	52205874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_52181203_52204888
transcript_57152.known	chr15	-	745	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	745.590146572946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACTCTTATTTAA	42	False	52569182	NA	False	TTTAAA	-45	NA	52569167	52551593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
transcript_57154.known	chr15	-	718	4	FSM	ENSG00000128989.11	ENST00000564163.5	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	709.843331697605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGAGCAACATAAGTAAA	-16	True	NA	NA	False	NA	NA	NA	52569015	52551734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52564189_52564247_52568847
transcript_57156.known	chr15	-	5366	3	FSM	ENSG00000128989.11	ENST00000249822.9	5366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1564	junction_1	92.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTCATCTTATTTGT	-31	True	NA	0	True	ATTAAA	-17	NA	52569030	52547044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52568847
transcript_57159.known	chr15	-	955	3	FSM	ENSG00000128989.11	ENST00000563277.5	955	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGGTGTAACTTATGT	0	True	NA	NA	False	NA	NA	NA	52569209	52551366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52569115
transcript_57163.known	chr15	-	959	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	376	2	279	-2	multi-exon	FALSE	canonical	3	16	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	351	False	NA	-14	True	AATAAA	-16	NA	52804613	52800167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52800918_52804208_52804298_52804493
transcript_5717.known	chr1	-	5988	9	FSM	ENSG00000126705.15	ENST00000642245.1	5988	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.0409457685017	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAGAAAAAGACAAAAAAAA	0	True	NA	NA	False	TTTAAA	-32	NA	27604151	27534684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27534917_27547260_27552190_27552891_27552930_27553073_27553186_27558304_27558531_27558705_27558884_27603396_27603492_27603727_27603864_27604109
transcript_57171.known	chr15	-	4333	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	53541103	53513740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_53517755_53523217_53523323_53540889
transcript_57172.known	chr15	-	4224	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTTTTTTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	53541080	53513741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_53517755_53523217_53523323_53540974
transcript_57177.known	chr15	-	1395	6	FSM	ENSG00000137876.11	ENST00000677730.1	1395	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	876.540244369875	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATATTTATTCTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	55196958	55181314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55182220_55183310_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
transcript_57180.known	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	8.67307455417179	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-25	True	NA	0	True	AATAAA	-22	NA	55289813	55202965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
transcript_57188.known	chr15	+	1910	12	FSM	ENSG00000069943.10	ENST00000164305.10	1910	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	14.5874394062067	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAGTTTTATTGTTTC	-6	True	NA	8	True	AATAAA	-19	NA	55319221	55355648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_55319414_55320274_55320411_55321272_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_57194.known	chr15	-	2970	8	FSM	ENSG00000260916.8	ENST00000569205.5	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	37.096124446896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAGAGGCAAACTAAGC	4	True	NA	NA	False	GATAAA	-9	NA	55408052	55359017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55407846
transcript_57195.known	chr15	-	6822	8	FSM	ENSG00000260916.8	ENST00000310958.10	6822	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	14.4321070632709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTGAGTACTGTTT	NA	False	NA	-25	True	AATAAA	-22	NA	55408510	55355249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_57201.known	chr15	+	868	2	FSM	ENSG00000261652.3	ENST00000569691.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAAAAGCCTTTCATAT	-15	True	NA	103	True	AATAAA	-35	NA	55408494	55418798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_55408787_55418222
transcript_57202.known	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	18	True	NA	-7	True	AATAAA	-27	NA	55319123	55317183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55317868_55318863
transcript_57203.known	chr15	-	801	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAAAACCCACAAATA	-20	True	NA	NA	False	AAAACA	-4	NA	55319161	55317321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55317868_55318906
transcript_57207.known	chr15	-	833	3	FSM	ENSG00000166450.13	ENST00000561292.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGATTTTGCAGACAGT	18	True	NA	NA	False	AATAAA	-11	NA	55743090	55738222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55738500_55740381_55740685_55742837
transcript_57210.known	chr15	+	1433	13	FSM	ENSG00000151575.14	ENST00000352903.6	1433	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	14.6768430604889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGGACATTGTTTGTG	-8	True	NA	NA	False	ATTAAA	-17	NA	56365426	56445874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660_56394835_56412301_56412437_56427604_56427740_56428366_56428474_56445670
transcript_57213.known	chr15	+	4440	8	FSM	ENSG00000151575.14	ENST00000558083.2	4440	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	10.9414023650666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTCTTGCAGTGGCTA	12	True	NA	NA	False	ATTAAA	-21	NA	56365446	56398341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
transcript_57214.known	chr15	-	3666	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	20.0299775336868	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATTCTCTGTTTTA	4	True	NA	NA	False	AATAAA	-9	NA	56733494	56697762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
transcript_57216.known	chr15	-	1441	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	971	False	NA	-30	True	AATAAA	-19	NA	56918493	56916725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_56917213_56917539
transcript_57218.known	chr15	+	6114	21	FSM	ENSG00000140262.18	ENST00000333725.10	6114	21	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_15	55.0103626601389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	-33	True	NA	NA	False	AATAAA	-37	NA	56918643	57289853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_57222.known	chr15	+	6061	20	FSM	ENSG00000140262.18	ENST00000267811.9	6061	20	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_14	35.1426850176435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	-52	True	NA	NA	False	AATAAA	-37	NA	56918624	57289853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_57230.nic	chr15	+	2052	18	ISM	ENSG00000140262.18	ENST00000333725.10	6114	21	-72	26629	-51	0	5prime_fragment	FALSE	canonical	3	117	junction_15	56.5222190441488	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATCCTCCCAAAAAGA	2	True	NA	NA	False	NA	NA	NA	56918571	57263224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111
transcript_57232.nic	chr15	+	1863	17	ISM	ENSG00000140262.18	ENST00000333725.10	6114	21	-6	27655	-6	0	5prime_fragment	FALSE	canonical	3	117	junction_15	57.8734813515655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAGAGGTAACTATAT	-39	True	NA	NA	False	CATAAA	-10	NA	56918637	57262198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093
transcript_57233.nic	chr15	+	2052	17	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-125	26629	-123	0	5prime_fragment	FALSE	canonical	3	177	junction_14	33.8257829731996	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATCCTCCCAAAAAGA	421	False	NA	NA	False	NA	NA	NA	56918499	57263224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111
transcript_57235.nic	chr15	+	1791	16	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	13	27655	-6	0	5prime_fragment	FALSE	canonical	3	177	junction_14	34.7368520290611	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAGAGGTAACTATAT	-39	True	NA	NA	False	CATAAA	-10	NA	56918637	57262198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093
transcript_57240.known	chr15	+	3956	13	FSM	ENSG00000140262.18	ENST00000343827.7	3956	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	79.957410538361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGTAAAATAGTGAGT	33	False	NA	10	True	AATAAA	-18	NA	57219465	57288506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_57251.known	chr15	+	4786	21	FSM	ENSG00000140262.18	ENST00000438423.6	4786	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	82.248692998734	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTGAGTTTTTTACA	-54	True	NA	18	True	AATAAA	-26	NA	56918622	57288514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56918907_56919901_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_57252.known	chr15	+	2530	3	FSM	ENSG00000247982.7	ENST00000501726.2	2538	3	0	8	0	3	multi-exon	FALSE	canonical	0	0	junction_1	21	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAACTGTGGCTTGTG	369	False	NA	NA	False	AATAAA	-30	NA	57300364	57307761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57300925_57305318_57307069_57307541
transcript_57253.known	chr15	+	1470	1	FSM	ENSG00000247982.7	ENST00000613170.1	1470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTTTCATGT	5633	False	NA	NA	False	AATAAA	-38	NA	57306299	57307769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57306300_57307800
transcript_57255.known	chr15	+	7214	19	FSM	ENSG00000128849.11	ENST00000281282.6	7214	19	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	35.6762275174456	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	-12	True	NA	24	True	AATAAA	-20	NA	57376504	57550717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
transcript_57264.nic	chr15	+	2796	10	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-54	32271	-54	-32271	5prime_fragment	FALSE	canonical	3	102	junction_1	31.3372731959567	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGTCAGCCAGAAG	NA	False	NA	27	True	AAGAAA	-3	NA	57376450	57518446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392
transcript_57265.nnic	chr15	+	2808	10	NNC	ENSG00000128849.11	novel	577	3	NA	NA	9030	-32271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.802858932134	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGTCAGCCAGAAG	9659	False	NA	27	True	AAGAAA	-3	NA	57386175	57518446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_57386305_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392
transcript_57268.nic	chr15	+	2743	9	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-54	33730	-54	-33730	5prime_fragment	FALSE	canonical	3	102	junction_1	33.0489693485289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	57376450	57516987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779
transcript_5728.known	chr1	-	2637	13	FSM	ENSG00000000938.13	ENST00000374005.8	2637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.25830573921179	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCTTCAATCTGTGTA	-1	True	NA	NA	False	ATTAAA	-20	NA	27635185	27612063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27613123_27613218_27613351_27614429_27614584_27614849_27614927_27615433_27615614_27615688_27615845_27616856_27617007_27617192_27617297_27621558_27621658_27623041_27623145_27623690_27623930_27625088_27625152_27635064
transcript_57280.nic	chr15	+	2037	5	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-54	99116	-54	13584	5prime_fragment	FALSE	canonical	3	102	junction_1	29.5042369838639	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTGGTTTTTCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	57376450	57451601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499
transcript_57283.nnic	chr15	+	2049	5	NNC	ENSG00000128849.11	novel	577	3	NA	NA	9030	13584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.6359287304778	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTGGTTTTTCCTTTAT	9659	False	NA	NA	False	NA	NA	NA	57386175	57451601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_57386305_57437984_57439602_57440376_57440472_57442372_57442479_57451499
transcript_57289.nic	chr15	+	1824	3	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-54	110251	-54	2449	5prime_fragment	FALSE	canonical	3	102	junction_1	35	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTTAGTGATTTTCCC	NA	False	NA	NA	False	NA	NA	NA	57376450	57440466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984_57439602_57440376
transcript_57294.nic	chr15	+	2257	2	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-54	110593	-54	2107	5prime_fragment	FALSE	canonical	3	102	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTAAGTGCTAGGCACT	NA	False	NA	NA	False	AATAAA	-40	NA	57376450	57440124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984
transcript_57295.known	chr15	+	2398	13	FSM	ENSG00000263155.6	ENST00000267853.10	2398	13	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	1.84842275106824	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTCTCTGTTTCATC	0	True	NA	7	True	AATAAA	-24	NA	57591903	57685364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57592110_57604268_57604356_57618032_57618189_57621607_57621701_57625778_57625893_57629701_57629855_57632433_57632560_57633612_57633742_57637694_57637775_57639439_57639546_57661449_57661534_57674967_57675069_57684401
transcript_57296.known	chr15	+	4114	4	FSM	ENSG00000255529.9	ENST00000299638.8	4114	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	11.5854314646552	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTTTGGTGTCTTTC	18	True	NA	NA	False	TATAAA	-18	NA	57706713	57717557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57714535
transcript_573.nic	chr1	+	3238	16	NIC	ENSG00000187583.11	novel	3176	16	NA	NA	-26	0	intron_retention	TRUE	canonical	1	2	junction_6	2.0154955277108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTGTCTGAAATTAACC	5854	False	NA	27	True	AGTAAA	-16	NA	966455	975865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_966615_966703_966804_970276_970424_970520_970602_970685_970759_970878_971007_971076_971209_971323_971405_972074_972151_972287_972425_972860_973011_973185_973327_973499_973641_973832_974052_974315_974365_974441
transcript_5730.known	chr1	-	822	5	FSM	ENSG00000126709.16	ENST00000339145.8	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.3219918742243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCTGCTGTCAATCA	12	False	NA	-15	True	AATAAA	-17	NA	27672178	27666063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669220_27669347_27672122
transcript_57300.known	chr15	+	1648	4	FSM	ENSG00000255529.9	ENST00000494490.2	1648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.690865173466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATGGTATTAAAATTTT	-1	True	NA	NA	False	NA	NA	NA	57706694	57714882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57707146_57708713_57709359_57711983_57712189_57714535
transcript_57301.known	chr15	+	261	2	FSM	ENSG00000255529.9	ENST00000649091.1	261	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTTTGACTCTTTTG	32	False	NA	NA	False	NA	NA	NA	57706727	57708746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57706956_57708713
transcript_57305.known	chr15	-	11158	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_9	74.4322510743831	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTTTGTGGATGAA	-47	True	NA	NA	False	AATAAA	-14	NA	58749707	58588808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_5731.known	chr1	-	828	5	FSM	ENSG00000126709.16	ENST00000362020.4	828	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	10.4731800328267	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTCCTGCTGTCAAT	-8	True	NA	-17	True	AATAAA	-15	NA	27672198	27666065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669232_27669347_27672122
transcript_57314.known	chr15	-	995	6	FSM	ENSG00000137845.15	ENST00000558733.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	352.670611194072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCAGTTATTTCTT	11	True	NA	NA	False	ATTAAA	-21	NA	58749770	58655242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58655417_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_57316.known	chr15	-	1932	2	FSM	ENSG00000137845.15	ENST00000461408.2	1932	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCAGTCACTGTTGTGT	-59	True	NA	2	True	AATAAA	-28	NA	58749719	58747344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58749037_58749479
transcript_57317.known	chr15	+	5905	14	FSM	ENSG00000157450.16	ENST00000348370.9	5905	14	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	22.0936682675103	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTACTCTGGTGACTTT	-4	True	NA	100	True	GATAAA	-19	NA	58987662	59097419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
transcript_57319.nnic	chr15	+	2036	10	NNC	ENSG00000128923.11	novel	9250	9	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	32.0327764240332	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTTATTTTGTAAC	1	True	NA	NA	False	GATAAA	-21	NA	58771260	58854591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_58772236_58787905_58787964_58802312_58802378_58806775_58806830_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_5732.known	chr1	+	3579	9	FSM	ENSG00000009780.16	ENST00000373954.11	3579	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_6	7.27044530960793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAATTGTTGGATTTTGT	-14	True	NA	10	True	AATAAA	-18	NA	27725960	27763116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27749067_27749155_27755194_27755331_27759525_27759628_27760494
transcript_57323.known	chr15	+	1859	9	FSM	ENSG00000128923.11	ENST00000560289.5	1859	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.3143824813255	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTTATTTTGTAAC	-18	True	NA	NA	False	GATAAA	-21	NA	58771285	58854591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810287_58821716_58821824_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_57325.known	chr15	+	4820	9	FSM	ENSG00000128923.11	ENST00000450403.3	4820	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	21.2893018908559	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58	False	NA	NA	False	AATAGA	-16	NA	58771361	58857533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854484
transcript_57329.known	chr15	+	4866	8	FSM	ENSG00000128923.11	ENST00000316848.9	4866	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	34.2207718277919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGAGCTATTGTGTCT	-3	True	NA	NA	False	AATAGA	-35	NA	58771191	58857552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58847296_58847471_58851770_58851966_58854484
transcript_5733.known	chr1	+	2273	8	FSM	ENSG00000009780.16	ENST00000373949.5	2273	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	8.99886614172778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	7	True	NA	NA	False	NA	NA	NA	27726027	27761964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27755194_27755331_27759525_27759628_27760494
transcript_57338.known	chr15	-	4168	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_15	73.5916265617224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	0	True	NA	-6	True	AATAAA	-16	NA	58933679	58879049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57345.nic	chr15	-	1600	12	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_6	124.315913225105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGGATACTAAGAAAATA	3	True	NA	19	True	AAAAAG	-40	NA	58933676	58893925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57351.known	chr15	-	1373	11	FSM	ENSG00000137776.17	ENST00000249736.11	1373	11	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_5	129.703854992826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGATGAAAAGAGTAG	19	True	NA	NA	False	AAGAAA	-13	NA	58933579	58894157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57352.nic	chr15	-	1609	11	ISM	ENSG00000137776.17	ENST00000380516.7	4168	21	-14	15040	-14	0	5prime_fragment	FALSE	canonical	3	309	junction_5	80.859384118357	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTATTTTTATTT	302	False	NA	NA	False	GATAAA	-27	NA	58933693	58894089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57354.nic	chr15	-	1963	11	ISM	ENSG00000137776.17	ENST00000380516.7	4168	21	-436	15108	-436	0	5prime_fragment	FALSE	canonical	3	309	junction_5	80.859384118357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGATGAAAAGAGTAG	NA	False	NA	NA	False	AAGAAA	-13	NA	58934115	58894157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57358.known	chr15	-	896	10	FSM	ENSG00000137776.17	ENST00000558756.5	896	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	159.399412920833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTATTTTTATTT	5	True	NA	NA	False	GATAAA	-27	NA	58933449	58894089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57368.nic	chr15	-	673	5	ISM	ENSG00000137776.17	ENST00000557950.5	924	7	-118	12145	3	937	5prime_fragment	FALSE	canonical	3	497	junction_2	33.6777003371667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTACATTTAGTCCTA	3	True	NA	NA	False	NA	NA	NA	58933676	58912561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57369.nic	chr15	-	1063	4	ISM	ENSG00000137776.17	ENST00000557950.5	924	7	-557	13082	-436	0	5prime_fragment	FALSE	canonical	3	497	junction_1	34.8934887272046	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTAGCCAGTTTTTTTT	NA	False	NA	-77	True	AATAGA	-32	NA	58934115	58913498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58913697_58916934_58917000_58932355_58932444_58933403
transcript_5737.known	chr1	+	1661	7	FSM	ENSG00000009780.16	ENST00000419687.6	1661	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.2836838484589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAAAGCAAGGTTGTC	21	True	NA	NA	False	NA	NA	NA	27725995	27761473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27744653_27744812_27755194_27755331_27759525_27759628_27760494
transcript_57370.nic	chr15	-	509	4	ISM	ENSG00000137776.17	ENST00000557950.5	924	7	-121	13200	0	-60	5prime_fragment	FALSE	canonical	3	497	junction_1	34.8934887272046	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGAAAATGTGCATT	0	True	NA	NA	False	ACTAAA	-25	NA	58933679	58913616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58913697_58916934_58917000_58932355_58932444_58933403
transcript_57373.known	chr15	-	685	3	FSM	ENSG00000137776.17	ENST00000484498.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTTTTGTATATAATATA	24	True	NA	NA	False	NA	NA	NA	58933574	58916573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58917000_58932355_58932444_58933403
transcript_57374.known	chr15	-	505	2	FSM	ENSG00000137776.17	ENST00000474342.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACAGTTCTTTAT	-18	True	NA	NA	False	NA	NA	NA	58933616	58932151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58932444_58933403
transcript_5738.known	chr1	+	3034	9	FSM	ENSG00000117758.14	ENST00000373943.9	3034	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	7.59831395771457	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTATCTGTGCCTTG	-10	True	NA	14	True	AATAAA	-14	NA	27773218	27824443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850_27817924_27819649_27819733_27822230
transcript_57382.known	chr15	-	8644	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	39.0725118171102	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTTTGGAATATG	-1	True	NA	NA	False	AGTAAA	-20	NA	59372871	59132433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
transcript_57396.known	chr15	+	1488	9	FSM	ENSG00000157456.8	ENST00000288207.7	1488	9	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	46.9674089129899	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGTGTATTTATTTGT	19	True	NA	18	True	AATAAA	-23	NA	59105145	59125045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516_59123628_59124766
transcript_57399.known	chr15	-	2515	10	FSM	ENSG00000140299.13	ENST00000612191.4	2515	10	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_1	32.12283522994	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGTTTAATTACC	NA	False	NA	-23	True	AATAAA	-17	NA	59689443	59662864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_57400.known	chr15	-	970	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	720.495773755822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAACTGGTGAAGC	9	True	NA	-10	True	AATAAA	-16	NA	59657514	59638868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
transcript_57402.known	chr15	-	758	5	FSM	ENSG00000140307.11	ENST00000396061.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	589.843782284767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTTCTGTTATTCAT	0	True	NA	-4	True	AATAGA	-19	NA	59657479	59639108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657123
transcript_57403.known	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_2	103.094616736278	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	8	True	NA	-5	True	AATAAA	-18	NA	59657515	59638061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
transcript_57404.known	chr15	-	633	4	FSM	ENSG00000140307.11	ENST00000396064.7	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	734.684966499247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTGGTGAAGCTAT	3	True	NA	-7	True	AATAAA	-19	NA	59657520	59638865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59650668_59650774_59652205_59652327_59657405
transcript_57405.known	chr15	-	408	4	FSM	ENSG00000140307.11	ENST00000484743.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	716.807893061701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACCATCTTCTGTTAT	3	True	NA	-8	True	AATAGA	-15	NA	59657520	59639112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59652205_59652327_59657405
transcript_57406.known	chr15	-	518	3	FSM	ENSG00000140307.11	ENST00000267869.8	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	690	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGAAGCTATTAAGGTA	26	True	NA	0	True	AATAAA	-26	NA	59657497	59638858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59657405
transcript_57407.known	chr15	-	1278	2	FSM	ENSG00000140307.11	ENST00000480768.1	1278	2	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATATT	-18	True	NA	NA	False	AAAAAG	-2	NA	59657541	59651184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59652327_59657405
transcript_57408.known	chr15	+	795	1	FSM	ENSG00000234797.5	ENST00000484430.1	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	21	False	NA	NA	False	NA	NA	NA	59768351	59769146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_59768400_59769100
transcript_57409.known	chr15	+	2871	2	FSM	ENSG00000171956.7	ENST00000396057.6	2871	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTTTGTGTGTTTTT	-2	True	NA	6	True	ATTAAA	-16	NA	60004310	60007444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_60004644_60004906
transcript_57410.known	chr15	-	757	3	FSM	ENSG00000259223.2	ENST00000560503.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGATCTGTGCTATTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	60118320	60073553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60074049_60074800_60074936_60118193
transcript_57411.known	chr15	-	1747	15	FSM	ENSG00000182718.18	ENST00000678870.1	1747	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	1191.32343018431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397257_60397339_60397942
transcript_57412.known	chr15	-	1920	15	FSM	ENSG00000182718.18	ENST00000558169.6	1920	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1312.62755648387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-2	True	NA	-14	True	AATAAA	-22	NA	60397988	60347143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354209_60355914_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397257_60397339_60397942
transcript_57414.known	chr15	-	1676	14	FSM	ENSG00000182718.18	ENST00000396024.7	1676	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	1078.86460699973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATTTCGAATGCTCAG	0	True	NA	-4	True	AATAAA	-32	NA	60397986	60347133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397942
transcript_57415.known	chr15	-	1838	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1082.77585959892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
transcript_57416.known	chr15	-	1616	14	FSM	ENSG00000182718.18	ENST00000558558.6	1616	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	1084.55532294149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396372_60396428_60397942
transcript_57417.known	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	978.306512876253	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	0	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
transcript_5742.known	chr1	+	2340	7	FSM	ENSG00000117751.18	ENST00000311772.10	2340	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	3.24893144826965	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGAGAGAATGTAGT	-18	True	NA	17	True	AATAAA	-24	NA	27830781	27851676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27830892_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_57420.known	chr15	-	1554	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	0	0	0	multi-exon	FALSE	canonical	3	2478	junction_12	225.761842927945	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	0	True	NA	-21	True	AATAAA	-15	NA	60397986	60347150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_57422.known	chr15	-	1445	12	FSM	ENSG00000182718.18	ENST00000558985.6	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	843.024729302098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGTGTCGCTATTTA	4859	False	NA	-77	True	AAGAAA	-35	NA	60398033	60347206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397942
transcript_57425.known	chr15	-	1444	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	831.732612615911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTACTTTGTGGCCCTGC	1	True	NA	-7	True	AATAAA	-21	NA	60397985	60347331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
transcript_57427.known	chr15	-	7206	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	0	0	0	multi-exon	TRUE	canonical	3	289	junction_13	40.4703457965075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCCATGTCCCC	-26	True	NA	-2	True	AATAAA	-23	NA	60479142	60419608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_57428.known	chr15	-	7060	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_13	69.506834196358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTACTGTTGCCATGT	NA	False	NA	-6	True	AATAAA	-19	NA	60479160	60419612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
transcript_5744.known	chr1	+	1029	7	FSM	ENSG00000117751.18	ENST00000431586.1	1029	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.24933858267454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTGATTTGATATTTT	524	False	NA	NA	False	AAGAAA	-41	NA	27831323	27850432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27831367_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_57440.known	chr15	-	3796	9	FSM	ENSG00000128915.12	ENST00000561114.5	3796	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	50.2885424326456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTATCATGGATTTTC	0	True	NA	NA	False	AATAAA	-16	NA	60479073	60451094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_57443.known	chr15	-	559	5	FSM	ENSG00000128915.12	ENST00000560072.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	172.57534586377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTGAGTTCCTAAAGTT	13	True	NA	NA	False	TTTAAA	-34	NA	60479103	60466686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479071
transcript_57444.known	chr15	-	1701	10	FSM	ENSG00000069667.16	ENST00000449337.6	1701	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	5.89622184952071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGAACTTGTTTTTCTC	-16	True	NA	-54	True	AATGAA	-10	NA	60592541	60497284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60592386
transcript_57446.known	chr15	-	10827	11	FSM	ENSG00000069667.16	ENST00000335670.11	10827	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	11.8190524154858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCCTTGTTTTTCTTC	-1	True	NA	-1	True	AATAAA	-20	NA	61229302	60488283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60678656_60678687_61229052
transcript_57457.nnic	chr15	+	689	6	NIC	ENSG00000171914.17	novel	12023	59	NA	NA	-14	-4974	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	12.4803846094582	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATTGAAGAAAAGAAAGAG	3	True	NA	-59	True	AAGAAA	-1	NA	62390511	62653200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_62390686_62589686_62589763_62647274_62647447_62650083_62650182_62652004_62652135_62653161
transcript_5747.known	chr1	+	2337	7	FSM	ENSG00000130775.16	ENST00000328928.11	2337	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.8507929270724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTATCATTTATTAAATTC	-6	True	NA	29	True	AATAAA	-32	NA	27872542	27886685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27882126_27882512_27883044_27885294_27885452_27885866
transcript_57471.nic	chr15	+	1282	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	309	junction_9	623.886029477963	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTTTGCTATTCTT	NA	False	NA	24	True	AATAAA	-13	NA	63042594	63066091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_57472.known	chr15	+	1295	10	FSM	ENSG00000140416.23	ENST00000288398.10	1295	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	679.716934547839	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	NA	False	NA	26	True	AATAAA	-15	NA	63042631	63066093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_57473.known	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	730.254597916218	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	-2	True	NA	16	True	AATAAA	-24	NA	63042746	63066178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_57474.known	chr15	+	1097	10	FSM	ENSG00000140416.23	ENST00000560970.6	1097	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	768.746020766576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	81	False	NA	26	True	AATAAA	-15	NA	63042829	63066093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_57476.known	chr15	+	1807	10	FSM	ENSG00000140416.23	ENST00000357980.9	1807	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	800.685323741057	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	-2	True	NA	37	True	AATAAA	-27	NA	63042746	63071915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63043705_63043832_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_57490.nic	chr15	+	1180	9	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	189	junction_8	571.324215638546	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTGCTATTCTTT	NA	False	NA	25	True	AATAAA	-14	NA	63042618	63066092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63065895
transcript_57492.known	chr15	+	1717	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_8	225.619390511986	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	-2	True	NA	11	True	AATAAA	-1	NA	63042684	63071889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_575.known	chr1	+	3176	16	FSM	ENSG00000187583.11	ENST00000379410.8	3176	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.25684145064143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTGTCTGAAATTAACC	-16	True	NA	27	True	AGTAAA	-16	NA	966481	975865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_966615_966703_966804_970276_970424_970520_970602_970685_970759_970878_971007_971112_971209_971323_971405_972074_972151_972287_972425_972860_973011_973185_973327_973499_973641_973832_974052_974315_974365_974441
transcript_57501.known	chr15	+	977	9	FSM	ENSG00000140416.23	ENST00000559556.5	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_5	607.384646970106	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACCTGCTTACCCCTT	9	True	NA	NA	False	NA	NA	NA	63042757	63071222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_57508.known	chr15	+	933	9	FSM	ENSG00000140416.23	ENST00000559397.6	933	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	790.797767684634	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCTTTCGTTTTGTT	21	False	NA	NA	False	NA	NA	NA	63042769	63071190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_57509.known	chr15	+	1670	9	FSM	ENSG00000140416.23	ENST00000267996.11	1670	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	842.382697694462	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	9	True	NA	37	True	AATAAA	-27	NA	63042757	63071915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_5751.known	chr1	+	2713	6	FSM	ENSG00000130775.16	ENST00000373921.8	2713	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	20.0159936051149	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	-5	True	NA	19	True	AATAAA	-22	NA	27872543	27886675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27883044_27885294_27885452_27885866
transcript_57516.known	chr15	+	941	9	FSM	ENSG00000140416.23	ENST00000559281.6	941	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_8	781.931173042104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	23	False	NA	26	True	AATAAA	-15	NA	63048575	63066093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_57540.known	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	546.279550174428	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	-18	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_57549.known	chr15	+	925	7	FSM	ENSG00000140416.23	ENST00000560959.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	585.778043858479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTGGCAGGTTTATTT	9	True	NA	NA	False	NA	NA	NA	63048561	63062892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575
transcript_57555.nic	chr15	+	678	4	ISM	ENSG00000140416.23	ENST00000288398.10	1295	10	-78	6503	-78	0	5prime_fragment	FALSE	canonical	3	1566	junction_2	200.237081702888	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAGATGAAGAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	63042553	63059590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562
transcript_57559.known	chr15	+	3957	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	0	0	0	0	multi-exon	FALSE	canonical	3	1643	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	0	True	NA	38	True	AAAACA	-20	NA	63042686	63047726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026
transcript_5756.known	chr1	+	1650	5	FSM	ENSG00000130775.16	ENST00000373925.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	32.9431328200583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTATCATTTATTAAATTC	-5	True	NA	29	True	AATAAA	-32	NA	27872543	27886685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27885294_27885452_27885866
transcript_57564.known	chr15	+	1911	6	FSM	ENSG00000103642.12	ENST00000261893.9	1911	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.8087702430447	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTTCTGCATGTGTAA	-1	True	NA	12	True	AATAAA	-17	NA	63121860	63142061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484_63129651_63141279
transcript_57567.known	chr15	+	2978	5	FSM	ENSG00000103642.12	ENST00000413507.3	2978	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	20.303940504247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTATTTTTTGTTTTG	-2	True	NA	27	True	AATAAA	-37	NA	63121832	63131471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484
transcript_57569.nic	chr15	+	836	4	ISM	ENSG00000103642.12	ENST00000413507.3	2978	5	-41	3978	-41	-100	5prime_fragment	FALSE	canonical	3	109	junction_3	21.6487105081727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGCAAAAGTAATGAAAA	-13	True	NA	93	True	AAGAAA	-3	NA	63121791	63127493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352
transcript_57570.known	chr15	-	923	4	FSM	ENSG00000185088.14	ENST00000455271.5	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1169.38739897815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	729	False	NA	-7	True	AATAAA	-19	NA	63157281	63153852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786
transcript_57571.known	chr15	-	6110	4	FSM	ENSG00000185088.14	ENST00000330964.10	6110	4	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_3	46.3105459551781	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTGGATTGGTAAAT	-1	True	NA	NA	False	AATAAA	-22	NA	63157477	63148248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157399
transcript_57573.known	chr15	-	693	5	FSM	ENSG00000185088.14	ENST00000635699.1	693	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	1242.05082424191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-1	True	NA	-7	True	AATAAA	-19	NA	63157477	63153852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786_63156974_63157399
transcript_57574.known	chr15	+	4800	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	37.4002073550947	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	22	True	NA	16	True	AATAAA	-23	NA	63189605	63267776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_57578.known	chr15	+	4138	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	10.590561835899	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	-1	True	NA	20	True	AATAAA	-22	NA	63277604	63309126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
transcript_57580.known	chr15	+	685	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	42.9825546006749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGCAGACTACATCT	4	True	NA	-88	True	NA	NA	NA	63277609	63305801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
transcript_57583.known	chr15	-	6098	11	FSM	ENSG00000074410.14	ENST00000178638.8	6098	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	5.18555686498567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCGTATCATGATGACTG	0	True	NA	NA	False	CATAAA	-17	NA	63381846	63321377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63326358_63327148_63327234_63328097_63328131_63338818_63338946_63340287_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63346529_63346710_63375657_63375679_63381635
transcript_57584.known	chr15	-	2744	10	FSM	ENSG00000074410.14	ENST00000344366.7	2744	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	3.82970843102535	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTGTACCATCACAAC	236	False	NA	NA	False	NA	NA	NA	63381835	63324687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63326358_63327148_63327234_63338818_63338946_63340287_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63346529_63346710_63375657_63375679_63381635
transcript_57586.nic	chr15	-	3785	7	NIC	ENSG00000074410.14	novel	2744	10	NA	NA	-67	2579	intron_retention	FALSE	canonical	3	13	junction_2	4.19324854180304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTAACCCACTTGTCAG	158	False	NA	NA	False	AAGAAA	-1	NA	63381913	63337442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63346529_63346710_63375657_63375679_63381635
transcript_57590.known	chr15	+	5499	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	34.4547368135194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	13	False	NA	22	True	ATTAAA	-23	NA	63504733	63594640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_57592.known	chr15	+	2439	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	31.7651101402501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	12	True	NA	-6	True	AATAAA	-17	NA	63504634	63591444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_57593.known	chr15	+	5517	15	FSM	ENSG00000140455.17	ENST00000380324.8	5517	15	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_5	12.4261081302758	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	-30	True	NA	15	True	ATTAAA	-16	NA	63504592	63594633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_57594.known	chr15	-	15197	78	FSM	ENSG00000103657.14	ENST00000443617.7	15197	78	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_33	30.0204517907548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTCTTGGTATTGCT	-15	True	NA	-5	True	AATAAA	-19	NA	63833948	63608617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63662983_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675118_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181_63723356_63725291_63725514_63727646_63727839_63729235_63729369_63729496_63729650_63732923_63733146_63734723_63734850_63746917_63747084_63747723_63747859_63749366_63749539_63749646_63749792_63752957_63753086_63754504_63754649_63755228_63755326_63756436_63756749_63758174_63758370_63764095_63764192_63774693_63775650_63833826
transcript_57598.known	chr15	-	495	2	FSM	ENSG00000103657.14	ENST00000559715.1	495	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAAAGAAAAAATCAT	NA	False	NA	0	True	NA	NA	NA	63677986	63674740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63675094_63677844
transcript_57599.known	chr15	-	1741	12	FSM	ENSG00000035664.11	ENST00000457488.5	1741	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1.96666433207127	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTCTTTTAGGGC	140	False	NA	1	True	ATTAAA	-17	NA	64046322	63907922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63908601_63911907_63911992_63912107_63912198_63924815_63924862_63925940_63926094_63929550_63929578_63930406_63930456_63939231_63939362_63971422_63971562_63983532_63983755_64040169_64040268_64046297
transcript_57603.known	chr15	-	919	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_2	120.175912727967	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-8	True	NA	-22	True	AATAAA	-18	NA	64093838	64072564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
transcript_57604.known	chr15	-	826	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	414.153219097581	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATTCTTATAATGAC	22	True	NA	-35	True	AATAAA	-5	NA	64093808	64072577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
transcript_57606.known	chr15	-	561	4	FSM	ENSG00000166797.11	ENST00000559950.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_1	113.620225116638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGTTACTTTCAAAAAAG	-27	True	NA	NA	False	NA	NA	NA	64093857	64075404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64075538_64081101_64081152_64088686_64088852_64093644
transcript_5761.known	chr1	+	1082	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	34.2960963117119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAGACCCTTATGGAG	0	True	NA	NA	False	NA	NA	NA	27872548	27886533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
transcript_57614.known	chr15	+	8214	15	FSM	ENSG00000028528.15	ENST00000559844.6	8214	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.845305887103	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCAGTGCATCCTTTGA	-11	True	NA	14	True	AATAAA	-22	NA	64095981	64144231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_57623.known	chr15	+	1374	13	FSM	ENSG00000028528.15	ENST00000561026.5	1374	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118.492850229689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAAGGACCCCAGAGC	21	True	NA	NA	False	NA	NA	NA	64096013	64137618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64096173_64112572_64112685_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_57627.known	chr15	+	3373	15	FSM	ENSG00000028528.15	ENST00000261889.9	3373	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.900769961153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCCTCAGTTTGGATT	0	True	NA	NA	False	AATACA	-14	NA	64095992	64139875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64138041
transcript_57630.known	chr15	+	1182	6	FSM	ENSG00000157734.14	ENST00000560607.5	1182	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.56124969497314	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGTGGCTCATGCCTGTA	15	True	NA	NA	False	AATAAA	-18	NA	64151740	64154762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64151851_64152242_64152743_64153244_64153340_64153651_64153685_64153934_64154003_64154386
transcript_57633.known	chr15	-	888	5	FSM	ENSG00000166794.6	ENST00000680343.1	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2360.40974991631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	582	False	NA	NA	False	NA	NA	NA	64162581	64155739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162492
transcript_57634.known	chr15	-	893	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	5179	junction_4	144.993965391667	3650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	-26	True	NA	NA	False	AATAAA	-30	NA	64163022	64155816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
transcript_57635.known	chr15	-	869	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	2151.41052567844	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-30	True	NA	NA	False	NA	NA	NA	64163026	64155739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
transcript_57639.known	chr15	-	2485	13	FSM	ENSG00000169118.18	ENST00000634654.1	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	11.7505910016854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCTGGTTATATTGG	57	False	NA	-4	True	TTTAAA	-32	NA	64356071	64171133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64171986_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_57646.known	chr15	-	8085	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	7.2590781009735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGAAGAAGAAAATTAT	-45	True	NA	1	True	AATAAA	-20	NA	64356173	64165524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_57653.known	chr15	-	2132	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_2	142.323574997258	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	-1	True	NA	-18	True	AATAAA	-27	NA	64381441	64364303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
transcript_57654.known	chr15	-	911	3	FSM	ENSG00000166803.14	ENST00000380258.6	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	664.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAGTTGGAGACCA	-4	True	NA	NA	False	NA	NA	NA	64381444	64365364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64366076_64380957_64381039_64381325
transcript_57656.known	chr15	+	2013	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_7	11.4041902630373	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	-11	True	NA	14	True	TATAAA	-21	NA	64387835	64455303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_57658.nnic	chr15	+	2097	13	NIC	ENSG00000103671.10	novel	2013	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	40.3130114093315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	-11	True	NA	14	True	TATAAA	-21	NA	64387835	64455303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_64388049_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_5766.known	chr1	-	1584	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_4	53.4297143451095	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	-8	True	NA	0	True	AATAAA	-29	NA	27914575	27891523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_57665.nic	chr15	+	1742	10	ISM	ENSG00000103671.10	ENST00000261884.8	2013	13	-56	30973	27	0	5prime_fragment	TRUE	canonical	3	140	junction_7	11.7861605388232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAGTGCAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	64387779	64424330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030
transcript_57666.nic	chr15	+	2315	5	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	-10	11297	-10	0	5prime_fragment	FALSE	canonical	3	19	junction_3	4.76313972081441	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCTAGTTTAAAACCTGA	-4	True	NA	NA	False	AAAAAG	-15	NA	64460567	64674771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_64460839_64499292_64500167_64622826_64623053_64670345_64670434_64673915
transcript_57667.nic	chr15	+	2600	5	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	-10	11012	-10	285	5prime_fragment	FALSE	canonical	3	19	junction_3	4.76313972081441	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAATCTTCAAAGGAACT	-4	True	NA	NA	False	AAAAAG	-16	NA	64460567	64675056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_64460839_64499292_64500167_64622826_64623053_64670345_64670434_64673915
transcript_5767.known	chr1	-	1162	9	FSM	ENSG00000117748.10	ENST00000373909.7	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	264.802491255275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAATAAGCTTGTTAC	-13	True	NA	NA	False	NA	NA	NA	27914746	27891923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914626
transcript_57676.known	chr15	-	1934	6	FSM	ENSG00000180304.14	ENST00000326005.10	1934	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	1118.04998099369	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTATTCTTTATTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	64703281	64687572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_57684.known	chr15	-	1744	5	FSM	ENSG00000180304.14	ENST00000560258.6	1744	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1415.90695315759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTCAATAAACTGATT	3	True	NA	-36	True	NA	NA	NA	64703208	64687603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64688835_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_57685.known	chr15	-	785	4	FSM	ENSG00000180304.14	ENST00000559753.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	1249.53546924002	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTTTATGAACTGGCA	10	True	NA	-42	True	AGTAAA	-3	NA	64703201	64688484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64703028
transcript_57687.known	chr15	-	707	3	FSM	ENSG00000180304.14	ENST00000560837.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	173.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATGCCTGCCGGTTAA	17	False	NA	NA	False	ATTAAA	-20	NA	64703194	64690166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64690550_64691433_64691592_64703028
transcript_57700.known	chr15	-	2017	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_2	161.68046087444	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	-4	True	NA	-11	True	AATAAA	-16	NA	64775589	64739890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
transcript_57710.known	chr15	-	2690	13	FSM	ENSG00000140451.13	ENST00000559239.2	2690	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	77.9282077014194	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	-14	True	NA	-5	True	AATAAA	-20	NA	64825647	64815631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825568
transcript_57711.known	chr15	-	2687	13	FSM	ENSG00000140451.13	ENST00000268043.8	2687	13	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_9	53.245239745498	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	NA	False	NA	-5	True	AATAAA	-20	NA	64825668	64815631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
transcript_57716.nic	chr15	-	2716	13	NIC	ENSG00000140451.13	novel	2687	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	68.1375243329417	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	NA	False	NA	-5	True	AATAAA	-20	NA	64825664	64815631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64820020_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
transcript_578.known	chr1	+	2455	15	FSM	ENSG00000187583.11	ENST00000379409.6	2455	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.07019667802706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCCCCGAGGAGGAGGG	4	True	NA	NA	False	NA	NA	NA	966501	975008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_966615_966703_966804_970276_970424_970520_970602_970685_971007_971076_971209_971323_971405_972074_972151_972287_972425_972860_973011_973185_973327_973499_973641_973832_974052_974315_974365_974441
transcript_57803.nic	chr15	-	1661	4	ISM	ENSG00000140451.13	ENST00000268043.8	2687	13	-49	5934	-49	24	5prime_fragment	FALSE	canonical	3	168	junction_1	21.202725191719	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCTTTGGGTATTAGC	NA	False	NA	NA	False	NA	NA	NA	64825717	64821565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_64822392_64822477_64822611_64823777_64824355_64825592
transcript_57809.nic	chr15	-	1730	3	NIC	ENSG00000140451.13	novel	1631	3	NA	NA	-32	0	intron_retention	FALSE	canonical	3	23	junction_2	98	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64825700	64821589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_64822611_64823777_64824355_64825568
transcript_57810.known	chr15	-	1631	3	FSM	ENSG00000140451.13	ENST00000560444.1	1631	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	17	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8	True	NA	NA	False	NA	NA	NA	64825625	64821589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64822611_64823777_64824355_64825592
transcript_57811.known	chr15	-	1114	2	FSM	ENSG00000140451.13	ENST00000560504.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGAGAGC	16	True	NA	NA	False	NA	NA	NA	64825617	64823265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64824355_64825592
transcript_57820.known	chr15	+	3101	15	FSM	ENSG00000166839.17	ENST00000319580.13	3101	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	11.1080041007393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAAATCCAGTACTCA	3	True	NA	NA	False	AATAAA	-20	NA	64911901	64958691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64911965_64915796_64915901_64917385_64917515_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486_64931586_64934135_64934235_64942466_64942566_64943483_64943583_64944651_64944748_64947403_64947594_64949840_64949973_64957102
transcript_57835.nic	chr15	+	1725	8	NIC	ENSG00000166839.17	novel	1448	8	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	13.6576210316767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	NA	False	NA	13	True	AGTAAA	-24	NA	64911872	64932514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_64911965_64915796_64915901_64917385_64917485_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
transcript_57839.known	chr15	+	1477	6	FSM	ENSG00000166839.17	ENST00000496660.5	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.7549990912395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	19	True	NA	13	True	AGTAAA	-24	NA	64911917	64932514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64911965_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
transcript_57840.known	chr15	+	3569	5	FSM	ENSG00000241839.10	ENST00000616065.4	3569	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36.8196618669971	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGTGCCTCAAGCCT	772	False	NA	14	True	AATAAA	-14	NA	64841882	64868000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64842029_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_57843.known	chr15	+	742	4	FSM	ENSG00000166839.17	ENST00000496480.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	20.138409955991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAACCTCCGCCTCCTG	3	True	NA	NA	False	NA	NA	NA	64911901	64931967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64911965_64921920_64922020_64930821_64930921_64931486
transcript_57845.known	chr15	+	3689	6	FSM	ENSG00000241839.10	ENST00000323544.5	3689	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.56971411425142	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTCAAGCCTGT	0	True	NA	16	True	AATAAA	-16	NA	64841914	64868002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64842029_64848592_64848743_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_57862.known	chr15	-	1613	9	FSM	ENSG00000090487.11	ENST00000433215.6	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	255.313410341094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-14	True	NA	-7	True	AATAAA	-12	NA	64989474	64963026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989405
transcript_57864.known	chr15	-	1799	9	FSM	ENSG00000090487.11	ENST00000204566.7	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	38.0441766240249	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTTTGTGATTATTGT	-1	True	NA	-2	True	AATAAA	-17	NA	64989914	64963021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
transcript_5787.known	chr1	+	1913	8	FSM	ENSG00000130768.15	ENST00000548116.5	1913	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	119.061123043621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTCCTTTTCTTTT	-9	True	NA	26	True	AAAACA	-25	NA	27935028	27959157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27935245_27945231_27945446_27948993_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_57870.nic	chr15	-	1728	8	NIC	ENSG00000090487.11	novel	1799	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_7	251.129692487726	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	4	False	NA	-7	True	AATAAA	-12	NA	64989935	64963026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64989664
transcript_57872.known	chr15	-	1533	8	FSM	ENSG00000090487.11	ENST00000416889.6	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	264.167077619372	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATTGGTTATTTTATGC	2	True	NA	41	True	NA	NA	NA	64989911	64963203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64980863_64981026_64983506_64983594_64989664
transcript_5788.known	chr1	+	1866	8	FSM	ENSG00000130768.15	ENST00000373894.8	1866	8	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	17.835987468587	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	6	True	NA	21	True	AAAACA	-20	NA	27934999	27959152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_57886.nnic	chr15	-	1905	9	NNC	ENSG00000103707.10	novel	2746	9	NA	NA	-4	68	intron_retention	FALSE	canonical	3	26	junction_8	72.386009525322	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGAGATTATCTTTCC	-18	True	NA	-3	True	AATAAA	-22	NA	65029643	65002509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029251
transcript_57887.known	chr15	-	2746	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	29.0850047275224	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTGCAAACTCAT	-14	True	NA	-5	True	AATAAA	-13	NA	65029639	65001511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_57898.nic	chr15	-	1044	6	ISM	ENSG00000103707.10	ENST00000558460.5	1522	10	-47	13677	-24	0	5prime_fragment	FALSE	canonical	3	226	junction_1	14.0484874630688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTATAGAGACCTTAGA	NA	False	NA	NA	False	TTTAAA	-1	NA	65029663	65016254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_57899.known	chr15	-	421	2	FSM	ENSG00000103707.10	ENST00000559633.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCTTTCTGTAATAT	93	False	NA	NA	False	TATAAA	-33	NA	65029532	65026747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65027041_65029404
transcript_57900.known	chr15	-	1111	8	FSM	ENSG00000103707.10	ENST00000560717.5	1111	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	80.714412136437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGGACTTTTTTTTT	-11	True	NA	-2	True	ATTAAA	-18	NA	65029598	65002995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65026817_65027041_65029404
transcript_57901.known	chr15	-	2519	5	FSM	ENSG00000103710.11	ENST00000220062.9	2519	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	10.7092249953019	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCTTGCAGTTC	-22	True	NA	-29	True	AATAAA	-22	NA	65067991	65053336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65055275_65058426_65058618_65059344_65059419_65065216_65065274_65067732
transcript_57902.known	chr15	-	1523	4	FSM	ENSG00000103710.11	ENST00000421977.7	1523	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	76.8779696806713	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCTTTCACCAGCAGAC	26	True	NA	NA	False	GATAAA	-39	NA	65067943	65054227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65055275_65058426_65058618_65059344_65059419_65067732
transcript_57905.known	chr15	-	1707	6	FSM	ENSG00000246922.10	ENST00000559089.6	1707	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.44522215417857	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGCAGGCACCTGGTCT	-2	True	NA	NA	False	AATAAA	-20	NA	65115200	65092759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65093232_65094474_65094577_65099504_65099715_65102105_65102685_65106095_65106389_65115149
transcript_57907.known	chr15	-	2823	5	FSM	ENSG00000090470.15	ENST00000204549.9	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.4373429638327	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCCTTTGCTGCCAA	-1	True	NA	0	True	AATAAA	-19	NA	65133808	65117378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65118841_65119375_65119464_65119717_65119955_65129031_65129171_65132911
transcript_57908.nnic	chr15	-	4257	15	NNC	ENSG00000166855.9	novel	4695	14	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.5969083557329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACGTGGTGGTGTGTCC	262	False	NA	NA	False	AATAAA	-20	NA	65185376	65148218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_65149747_65150218_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_57911.known	chr15	-	4695	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_8	30.1869912026658	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACGTGGTGGTGTGTCC	-11	True	NA	NA	False	AATAAA	-20	NA	65185342	65148218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_57923.known	chr15	-	2734	6	FSM	ENSG00000138617.16	ENST00000649807.2	2734	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	7.65767588763066	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGCCTTTGTGAGT	-6	True	NA	-6	True	AATAAA	-21	NA	65286883	65258098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65259543_65260884_65261027_65263148_65263321_65266561_65266769_65270934_65271073_65286252
transcript_57925.known	chr15	-	823	5	FSM	ENSG00000138617.16	ENST00000560149.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	19.2012369393224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCATATGGCCTAAAT	511	False	NA	NA	False	NA	NA	NA	65286366	65259285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65259543_65260884_65261027_65263148_65263321_65270934_65271073_65286252
transcript_57926.known	chr15	-	2352	4	FSM	ENSG00000138617.16	ENST00000444347.2	2352	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	21.2968437932844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTTGTGAGTGCT	34	True	NA	-3	True	AATAAA	-24	NA	65286843	65258095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65259543_65260884_65261027_65263148_65263321_65286252
transcript_57933.known	chr15	-	4441	14	FSM	ENSG00000174498.14	ENST00000327987.9	4441	14	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	24.3631305496136	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTTTTTGGGTGGTT	0	True	NA	-6	True	AATAAA	-21	NA	65378002	65327126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65329149_65329389_65329598_65329725_65329865_65330292_65330398_65330549_65330742_65331049_65331215_65331411_65331660_65331940_65332107_65333256_65333416_65334727_65334866_65335290_65335422_65335811_65335957_65375096_65375403_65377685
transcript_5794.known	chr1	+	1548	7	FSM	ENSG00000130768.15	ENST00000373888.8	1548	7	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	19.2649653228053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGCTTCCCACAGTCT	1	True	NA	26	True	GATAAA	-23	NA	27935038	27956480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948
transcript_57976.known	chr15	-	7281	20	FSM	ENSG00000074603.19	ENST00000300141.11	7281	20	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_4	8.11960453712711	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTAAGTGTTCCTTTT	-14	True	NA	-3	True	AATAAA	-18	NA	65517689	65442466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
transcript_57980.known	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	TRUE	canonical	1	601	junction_6	426.511723168309	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	-39	True	NA	32	True	ATTAAA	-17	NA	65530462	65578349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_57988.known	chr15	+	1332	10	FSM	ENSG00000074696.13	ENST00000442729.6	1332	10	0	0	0	0	multi-exon	FALSE	canonical	1	52	junction_3	683.483885854101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTATCTCATGTTCAGTC	-20	True	NA	-39	True	NA	NA	NA	65530481	65576637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_57992.known	chr15	+	1465	12	FSM	ENSG00000074696.13	ENST00000565299.5	1465	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	753.022548585158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTTCCCCAGTAAC	-12	True	NA	39	True	ATTAAA	-16	NA	65530489	65576499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65530719_65535720_65535835_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_57996.known	chr15	-	2419	12	FSM	ENSG00000138614.16	ENST00000567744.5	2419	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	85.4956380889189	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCATTTTCAAGCTTCTG	14	True	NA	NA	False	NA	NA	NA	65611121	65579026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65610685
transcript_57997.known	chr15	-	2615	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	64.9954861751222	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGGTCTGTCTT	-1	True	NA	18	True	ACTAAA	-5	NA	65611136	65578752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
transcript_57998.known	chr15	-	2393	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-114	25	-3	-22	multi-exon	FALSE	canonical	3	118	junction_11	55.8411264657034	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-2	True	NA	-11	True	AATAAA	-17	NA	65611245	65578781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
transcript_58.known	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00163_+_0_500
transcript_58001.known	chr15	-	1980	12	FSM	ENSG00000138614.16	ENST00000431261.6	1980	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	85.7160409107974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTCACCTCTTCCCTC	NA	False	NA	NA	False	GGGGCT	-14	NA	65611258	65579064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607301_65607443_65611097
transcript_58004.known	chr15	-	1741	11	FSM	ENSG00000138614.16	ENST00000420799.7	1741	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	87.9027303330221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTTGAATGACTGAT	1	True	NA	NA	False	NA	NA	NA	65611242	65579146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
transcript_58007.known	chr15	+	4895	5	FSM	ENSG00000103769.10	ENST00000261890.7	4895	5	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_4	77.9326632420579	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGTTTAATTTTTA	-6	True	NA	32	True	AATATA	-29	NA	65869490	65891989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_58021.known	chr15	+	3763	17	FSM	ENSG00000166938.13	ENST00000319194.9	3763	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	37.6583635298986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	NA	False	NA	21	True	AATAAA	-18	NA	66293216	66333898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66293368_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_58024.known	chr15	+	3780	17	FSM	ENSG00000166938.13	ENST00000319212.9	3780	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	18.3591555837952	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	-8	True	NA	21	True	AATAAA	-18	NA	66293567	66333898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_58028.nic	chr15	+	3829	17	NIC	ENSG00000166938.13	novel	3260	16	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	35.9404346627861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	165	False	NA	NA	False	NA	NA	NA	66293787	66333728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_66294175_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_58043.known	chr15	+	2399	12	FSM	ENSG00000166938.13	ENST00000564909.5	2399	12	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	16.6505155902599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTCCTTGGTTTTT	20	True	NA	NA	False	AAAACA	-16	NA	66293595	66326561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830
transcript_58048.known	chr15	-	1728	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	18.8593072350963	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGCTTTATGGGAGG	15	True	NA	-2	True	AGTAAA	-18	NA	66356685	66336190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
transcript_58052.known	chr15	-	1459	7	FSM	ENSG00000075131.10	ENST00000566524.5	1459	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	75.5191292911199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCACCATGTTGGC	15	True	NA	NA	False	NA	NA	NA	66356685	66336383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66352128_66352208_66352814_66352956_66356638
transcript_58063.known	chr15	+	2547	11	FSM	ENSG00000169032.11	ENST00000307102.10	2547	11	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_5	46.8333214709356	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	0	True	NA	18	True	AATAAA	-36	NA	66386911	66491544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655_66444708_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_58070.nnic	chr15	+	2566	10	NIC	ENSG00000169032.11	novel	2547	11	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	154.559589371435	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	NA	False	NA	18	True	AATAAA	-36	NA	66386814	66491544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_66387428_66435026_66435238_66436745_66436893_66444655_66444708_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_58073.nnic	chr15	+	2317	9	FSM	ENSG00000169032.11	ENST00000686347.1	2209	9	-97	-11	-22	0	multi-exon	FALSE	canonical	3	11	junction_5	162.301368986833	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	NA	False	NA	18	True	AATAAA	-36	NA	66386814	66491544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655_66444708_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_58075.known	chr15	+	1338	5	FSM	ENSG00000169032.11	ENST00000425818.2	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	21.2014150471142	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTAGTTACCCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	66386836	66444966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655
transcript_58078.known	chr15	-	749	4	FSM	ENSG00000174446.13	ENST00000395589.6	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	154.572528822772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCAAGTCACCTCTT	1	True	NA	NA	False	NA	NA	NA	66497750	66490305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66490718_66494414_66494553_66495329_66495420_66497641
transcript_58079.known	chr15	-	1069	3	FSM	ENSG00000174446.13	ENST00000565465.1	1069	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATAAATTTATAAGTA	-8	True	NA	-30	True	NA	NA	NA	66497759	66493843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66494553_66495329_66495420_66497489
transcript_58080.known	chr15	-	1296	3	FSM	ENSG00000174446.13	ENST00000316634.6	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	14	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCTGCTCTCGAACT	-11	True	NA	NA	False	AGTAAA	-20	NA	66497762	66493467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66494553_66495329_66495420_66497641
transcript_58081.known	chr15	-	794	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTTGAGACATCACT	-11	True	NA	-66	True	TATAAA	-24	NA	66497762	66493879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66494553_66497641
transcript_58084.known	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_15	54.2646691779067	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	8	True	NA	9	True	AATAAA	-19	NA	66505325	66550130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_58086.known	chr15	+	3256	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	114.020533671639	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	5517	False	NA	77	True	AATAAA	-24	NA	66505116	66549487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_58087.nic	chr15	+	2049	18	ISM	ENSG00000174442.12	ENST00000307897.10	3595	19	-234	3425	9	0	5prime_fragment	FALSE	canonical	3	496	junction_15	54.7419236115433	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTATGTTCACATTTTA	5492	False	NA	8	True	NA	NA	NA	66505091	66546705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590
transcript_5809.known	chr1	+	2178	3	FSM	ENSG00000158156.9	ENST00000373884.6	2178	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	21	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	-29	True	NA	17	True	AATAAA	-17	NA	27959972	27968093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27960363_27963496_27963694_27966502
transcript_58092.known	chr15	+	2206	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	138.421676603172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	5359	False	NA	NA	False	AAAACA	-22	NA	66504958	66548426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_5810.known	chr1	+	2243	4	FSM	ENSG00000158156.9	ENST00000675575.1	2243	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.0917993119412	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATGAAATCCTCCAAC	NA	False	NA	1	True	AATAAA	-1	NA	27959942	27968077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27960363_27963496_27963694_27964184_27964236_27966502
transcript_58105.known	chr15	-	2552	12	FSM	ENSG00000188501.11	ENST00000537670.5	2552	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	9.68853800090815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGCATTTTTCTCA	17	True	NA	NA	False	GATAAA	-16	NA	66565964	66547467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66548606_66550040_66550105_66551661_66551862_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
transcript_58106.nnic	chr15	-	1718	12	NIC	ENSG00000188501.11	novel	3147	13	NA	NA	-19	33	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	12.2548691621664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTAATCTCACCCCTC	-17	True	NA	-99	True	AATAAA	-26	NA	66565998	66548299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_66548606_66550040_66550105_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66564675_66564840_66565856
transcript_5811.known	chr1	-	5999	18	FSM	ENSG00000158161.16	ENST00000373871.8	5999	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_11	20.3887817719777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTCCTGTGTCTTTTC	0	True	NA	-5	True	AATAAA	-17	NA	28088610	27970343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_58110.nnic	chr15	-	1554	11	NIC	ENSG00000188501.11	novel	2552	12	NA	NA	-19	33	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	9.64572444143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTAATCTCACCCCTC	-17	True	NA	-99	True	AATAAA	-26	NA	66565998	66548299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_66548606_66550040_66550105_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
transcript_58114.known	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	8802	junction_7	641.677970078411	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-5	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_58118.known	chr15	-	1099	6	FSM	ENSG00000174444.15	ENST00000566039.5	1099	6	0	0	0	0	multi-exon	FALSE	canonical	3	8802	junction_3	813.05857107591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGATGAATTGTACGG	4	True	NA	NA	False	NA	NA	NA	66504846	66501007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_58122.known	chr15	+	3828	4	FSM	ENSG00000137834.15	ENST00000288840.10	3828	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	43.5226633171986	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGCTTAAAATAACTAACA	-6	True	NA	8	True	AATAAA	-16	NA	66702235	66782849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66704076_66711667_66711725_66716420_66716499_66780996
transcript_58125.known	chr15	+	6464	9	FSM	ENSG00000166949.17	ENST00000327367.9	6464	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.61769203083567	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGCCAGGAGCTCA	1	True	NA	15	True	AATAAA	-15	NA	67065601	67195169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_67066361_67164894_67165089_67165252_67165385_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
transcript_58126.known	chr15	+	1147	7	FSM	ENSG00000166949.17	ENST00000537194.6	1147	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.2984802670994	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAAGAAATGGCGTCT	719	False	NA	NA	False	NA	NA	NA	67166018	67190762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_67166194_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
transcript_58138.nnic	chr15	-	2457	10	NNC	ENSG00000103591.13	novel	2251	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	152.641191469843	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTGTAATGCATATCA	-2	True	NA	-19	True	AATAAA	-20	NA	67254657	67201672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254223
transcript_58139.known	chr15	-	2251	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	149.07045314213	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACTGCAAATAAAAATCC	-20	True	NA	-53	True	TTTAAA	-13	NA	67254675	67201706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
transcript_5814.known	chr1	-	5885	17	FSM	ENSG00000158161.16	ENST00000540618.5	5885	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.4448033475711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTGCTCCTGTGTCTT	-27	True	NA	-8	True	AATAAA	-14	NA	28088637	27970346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_58140.known	chr15	-	3132	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_3	66.4632080529623	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTGGTTTTTGGTTGT	-6	True	NA	NA	False	TTTAAA	-5	NA	67254661	67200666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_58142.known	chr15	+	4193	2	FSM	ENSG00000189227.6	ENST00000342683.6	4193	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTGCAATGATTGAGG	1	True	NA	NA	False	AATAAA	-16	NA	67521130	67530146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_67521595_67526417
transcript_58143.known	chr15	+	2344	22	FSM	ENSG00000137764.20	ENST00000178640.10	2344	22	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	9.55494909218228	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	-17	True	NA	20	True	AATAAA	-21	NA	67542702	67807114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_58151.known	chr15	+	7980	14	FSM	ENSG00000033800.14	ENST00000249636.11	7980	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	16.2600901763914	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGAAATCATCTATTAT	-3	True	NA	NA	False	AATAAA	-39	NA	68054314	68193847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541
transcript_58161.known	chr15	-	1053	7	FSM	ENSG00000128973.13	ENST00000636212.1	1053	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.7362975210561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCACTGAGTCCCTGGCAC	-11	True	NA	NA	False	NA	NA	NA	68229713	68208148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211555_68211742_68214289_68214389_68218535_68218651_68229501
transcript_58162.known	chr15	-	2323	7	FSM	ENSG00000128973.13	ENST00000638076.1	2323	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	29.7134462640887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGATTCAAGAATGAAGTAA	-40	True	NA	-44	True	NA	NA	NA	68229742	68207029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211555_68211864_68214289_68214389_68218535_68218651_68229501
transcript_58163.known	chr15	-	900	7	FSM	ENSG00000128973.13	ENST00000564752.1	900	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.0762918813695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGCCTCTTCCTGGACA	-7	True	NA	NA	False	NA	NA	NA	68229709	68208326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211648_68211864_68214289_68214389_68218535_68218651_68229501
transcript_58167.known	chr15	-	2228	7	FSM	ENSG00000128973.13	ENST00000249806.11	2228	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	7.35791335154804	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTAGAGGTGTTTTT	-26	True	NA	-6	True	AGTAAA	-18	NA	68229728	68206991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68229501
transcript_58169.known	chr15	-	1181	7	FSM	ENSG00000128973.13	ENST00000635747.1	1181	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	30.6363074363301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGGGAGGGTGGGCC	162	False	NA	NA	False	NA	NA	NA	68256997	68208112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68256696
transcript_58173.known	chr15	-	868	6	FSM	ENSG00000128973.13	ENST00000637450.1	868	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	32.4123433278126	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTGGGCTTTCTACA	25	True	NA	NA	False	NA	NA	NA	68229677	68208185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68229501
transcript_58174.known	chr15	-	874	6	FSM	ENSG00000128973.13	ENST00000637667.1	874	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	30.7870102478302	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGAAGAAGTACCCGG	-1	True	NA	NA	False	NA	NA	NA	68229703	68208221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68218535_68218651_68229501
transcript_58175.known	chr15	-	981	6	FSM	ENSG00000128973.13	ENST00000566347.5	981	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	30.895954427724	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGAGCATGAGTGGGGTG	-16	True	NA	NA	False	AATACA	-34	NA	68229718	68208039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68214289_68214389_68218535_68218651_68229501
transcript_58179.known	chr15	-	765	5	FSM	ENSG00000128973.13	ENST00000637494.1	765	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7490740613724	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGGGTGGGAGGGTGG	25	True	NA	NA	False	NA	NA	NA	68229677	68208115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68218535_68218651_68229501
transcript_58181.known	chr15	-	3238	4	FSM	ENSG00000260007.3	ENST00000637054.1	3238	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	34.1857670188438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTATACAAACTGACAT	25	True	NA	-16	True	AATAAA	-15	NA	68229677	68191354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68194113_68197439_68197629_68218535_68218651_68229501
transcript_58184.known	chr15	-	3389	3	FSM	ENSG00000260007.3	ENST00000562767.2	3389	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAAGCTTTGTATTTA	-16	True	NA	NA	False	NA	NA	NA	68229718	68191129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68194113_68197439_68197629_68229501
transcript_58189.known	chr15	-	894	3	FSM	ENSG00000128973.13	ENST00000636020.1	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	0.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGCAGGAACTGCTG	-14	True	NA	NA	False	NA	NA	NA	68229716	68213824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68214389_68218535_68218651_68229501
transcript_58192.known	chr15	+	7177	2	FSM	ENSG00000169018.6	ENST00000306917.5	7177	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGAGGTTTGTGTCT	-22	True	NA	29	True	AGTAAA	-14	NA	68277744	68295862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_68278666_68289606
transcript_58198.known	chr15	-	2440	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_4	227.435705200393	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGTTTACATATGGT	0	True	NA	-11	True	TATAAA	-18	NA	68820895	68778534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
transcript_5821.known	chr1	-	4191	3	FSM	ENSG00000169403.12	ENST00000539896.1	4191	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACTTTTAAAAACTTACA	7114	False	NA	-9	True	AATAAA	-20	NA	28193936	28147165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28151060_28176591_28176674_28193721
transcript_58217.known	chr15	-	707	3	FSM	ENSG00000140350.15	ENST00000495420.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	3081	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTAGAACCCTAGTTTCAA	-2	True	NA	NA	False	NA	NA	NA	68820897	68787178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68787536_68787769_68787920_68820697
transcript_5822.known	chr1	-	1600	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_8	1079.58967971318	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	0	True	NA	-25	True	AATAAA	-12	NA	28233025	28200558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
transcript_58221.known	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.6183802907977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	0	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
transcript_58222.known	chr15	+	1308	3	FSM	ENSG00000138604.10	ENST00000559798.2	1308	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATATAATGATTTA	5	True	NA	79	True	AATAAA	-16	NA	69160583	69197458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69160758_69194435_69194526_69196414
transcript_58223.nnic	chr15	+	1219	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-53	-52	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGTTTC	NA	False	NA	27	True	AATAAA	-26	NA	69160530	69197406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_69160758_69196414
transcript_58224.nnic	chr15	+	1270	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-53	-1	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTATAATATAATGATTT	NA	False	NA	78	True	AATAAA	-15	NA	69160530	69197457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_69160758_69196414
transcript_58225.known	chr15	-	2419	1	FSM	ENSG00000261634.4	ENST00000563004.2	2419	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATATTGGATTGGACAC	-2	True	NA	NA	False	AGTAAA	-15	NA	69298763	69296344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_69296300_69298800
transcript_5823.known	chr1	-	1763	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	0	0	0	0	multi-exon	FALSE	canonical	3	2334	junction_2	229.588218338834	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCCAGCTCACAGTCTAT	-4	True	NA	-13	True	ATTAAA	-18	NA	28233029	28200277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_58231.known	chr15	+	5372	9	FSM	ENSG00000137819.14	ENST00000395407.7	5372	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	14.8991400758567	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCCACTGTCCTAGG	-17	True	NA	NA	False	AGTAAA	-34	NA	69298911	69407780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69299057_69337340_69337502_69359965_69360132_69379882_69380011_69384676_69384883_69389653_69389781_69397467_69397565_69399973_69400116_69403580
transcript_58236.known	chr15	+	3660	24	FSM	ENSG00000137807.16	ENST00000679126.1	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	103.833333080476	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	11	True	NA	NA	False	ATTAAA	-21	NA	69414348	69448425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_58237.nic	chr15	+	3413	23	NIC	ENSG00000137807.16	novel	3660	24	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	101.08040331283	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	-7	True	NA	NA	False	ATTAAA	-21	NA	69414283	69448425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_58238.known	chr15	+	3620	23	FSM	ENSG00000137807.16	ENST00000647715.1	3620	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	65.6677084561681	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	11	True	NA	NA	False	ATTAAA	-23	NA	69414348	69448427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_58240.known	chr15	+	3351	22	FSM	ENSG00000137807.16	ENST00000352331.8	3351	22	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_17	55.4347075641343	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	13	False	NA	NA	False	ATTAAA	-21	NA	69414303	69448425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_58252.nic	chr15	+	1892	16	ISM	ENSG00000137807.16	ENST00000559279.6	3129	22	-75	10036	-9	0	5prime_fragment	FALSE	canonical	3	79	junction_7	108.03324591172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGAACGACTGGAAAA	-7	True	NA	48	True	ACTAAA	-35	NA	69414283	69438360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247
transcript_58253.known	chr15	+	3723	23	FSM	ENSG00000137807.16	ENST00000260363.9	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	65.6677084561681	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	69414245	69448427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_58256.known	chr15	+	445	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	1029	junction_1	9844	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	-8	True	NA	51	True	AATAAA	-15	NA	69452813	69455547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69453021_69455169_69455288_69455427
transcript_58257.known	chr15	+	1962	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	20717	junction_2	1435.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	-3	True	NA	50	True	AATAAA	-14	NA	69452818	69455546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69453021_69453646_69455288_69455427
transcript_58258.known	chr15	+	1922	7	FSM	ENSG00000245750.10	ENST00000668790.1	1922	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.37436854187255	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTCTGTCTATATA	4398	False	NA	NA	False	AATAAA	-17	NA	69462920	69571440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69463126_69464832_69464892_69468172_69468394_69563115_69563303_69563589_69563805_69565193_69565528_69570739
transcript_58266.known	chr15	-	6004	20	FSM	ENSG00000140332.18	ENST00000558939.5	6004	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	43.493814633317	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAAGTGTCTGTGAACA	1355	False	NA	-6	True	ATTAAA	-22	NA	70098176	70047789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_58267.known	chr15	-	5207	20	FSM	ENSG00000140332.18	ENST00000317509.12	5207	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	45.7934662506185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAAAGAATGAAAA	-1	True	NA	-77	True	AAGAAA	-10	NA	70097900	70048274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058185_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_58269.known	chr15	-	2304	20	FSM	ENSG00000140332.18	ENST00000558379.5	2304	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	41.6221627517476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAACTCCAGCAGGGCT	2733	False	NA	NA	False	NA	NA	NA	70096798	70050096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_58270.known	chr15	-	3408	20	FSM	ENSG00000140332.18	ENST00000559929.5	3408	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	50.106479419117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGTTAGAAGACAGCA	2680	False	NA	-86	True	AAAAAG	-3	NA	70096851	70049090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074502_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_58282.nic	chr15	-	3742	20	NIC	ENSG00000140332.18	novel	3683	20	NA	NA	-2	0	intron_retention	FALSE	canonical	3	4	junction_14	43.3677184409104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGCTCATGAGTCTCTG	-20	True	NA	-1	True	AATAGA	-35	NA	70097919	70049800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057659_70058158_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074502_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_58297.known	chr15	-	3719	20	FSM	ENSG00000140332.18	ENST00000561453.5	3719	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	50.2270743998701	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTCATGAGTCTCTGTT	-18	True	NA	1	True	AATAGA	-37	NA	70097917	70049798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055297_70056297_70056375_70057473_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_58298.known	chr15	-	6904	19	FSM	ENSG00000137831.15	ENST00000322954.11	6904	19	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_10	28.0123429585012	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAAATCTTTAATATT	-4	True	NA	NA	False	AATAAA	-22	NA	70763558	70654553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723_70669463_70671038_70671092_70671964_70672002_70676492_70676592_70677107_70677141_70678098_70678207_70679607_70679677_70682757_70682796_70684264_70684447_70687539_70687647_70687749_70687821_70690453_70690512_70691298_70691364_70695016_70695106_70699526_70699661_70763329
transcript_583.known	chr1	-	885	4	FSM	ENSG00000188290.11	ENST00000304952.11	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	26.7374061735406	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCGTCACGAGTTTT	-2	True	NA	-6	True	NA	NA	NA	1000097	998963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_999433_999525_999614_999691_999788_999865
transcript_58301.known	chr15	+	6176	16	FSM	ENSG00000137821.12	ENST00000260382.10	6176	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	11.5727649630021	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATAGTGTACTTGCGG	-17	True	NA	NA	False	AATAAA	-22	NA	70892825	71053658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_58303.known	chr15	-	4467	3	FSM	ENSG00000166173.11	ENST00000299213.10	4467	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTATGGGCCAGGCAT	9	True	NA	NA	False	AATAAA	-17	NA	70854157	70829129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70833117_70836294_70836506_70853888
transcript_58304.known	chr15	-	527	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	625	False	NA	-3	True	AATAAA	-36	NA	70854121	70851426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70851721_70853888
transcript_58305.known	chr15	-	2047	3	FSM	ENSG00000129028.9	ENST00000249861.9	2047	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAGCCTGAACAATGA	-21	True	NA	-15	True	AATAAA	-18	NA	70892433	70881341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70882651_70882760_70882909_70891843
transcript_58308.known	chr15	-	555	1	FSM	ENSG00000212664.5	ENST00000498103.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	71341712	71341157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_71341200_71341700
transcript_5831.nic	chr1	-	459	5	ISM	ENSG00000126698.11	ENST00000263697.6	1763	9	-27	9692	-27	190	5prime_fragment	FALSE	canonical	3	2563	junction_1	50.1616138097649	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTATAGTGCTGCTG	-31	True	NA	0	True	NA	NA	NA	28233056	28209969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_58310.known	chr15	+	4178	2	FSM	ENSG00000166192.15	ENST00000340912.6	4178	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCTCCATCTCGTCTC	-6	True	NA	NA	False	AATAAA	-17	NA	72118402	72143692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72118465_72139576
transcript_58311.known	chr15	-	3284	12	FSM	ENSG00000175318.12	ENST00000309731.12	3284	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	4.61760912698193	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGGTATAGAAAGTTCAT	1	True	NA	0	True	AATAAA	-22	NA	72197787	72159805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72162013_72162272_72162378_72163265_72163477_72163612_72163758_72165353_72165411_72166631_72166704_72166993_72167093_72167735_72167840_72168490_72168567_72168938_72168997_72169846_72169940_72197730
transcript_5833.known	chr1	-	721	4	FSM	ENSG00000126698.11	ENST00000482674.5	721	4	0	0	0	0	multi-exon	FALSE	canonical	3	2624	junction_3	30.6195289897731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGAGCACAAGTCCATT	21	True	NA	NA	False	ATTAAA	-13	NA	28233004	28210159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28210638_28214939_28214997_28228921_28229024_28232920
transcript_58349.known	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	2	6951	junction_5	1806.36751520835	19902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	10	True	NA	-5	True	AATAAA	-17	NA	72231190	72199028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_5835.known	chr1	+	599	3	FSM	ENSG00000130770.18	ENST00000497986.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2021.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGCCTTCTTCTATCT	-30	True	NA	20	True	AATAAA	-20	NA	28236108	28238105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28236271_28236360_28236453_28237760
transcript_58352.known	chr15	-	2254	11	FSM	ENSG00000067225.20	ENST00000567118.5	2254	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	5297.37057510611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCACTACTGCAGCACCT	10	True	NA	-81	True	NA	NA	NA	72231190	72199104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72218943_72219111_72221167_72221285_72231115
transcript_58359.known	chr15	-	2503	11	FSM	ENSG00000067225.20	ENST00000565184.6	2503	11	0	0	0	0	multi-exon	FALSE	canonical	2	142	junction_10	5274.4646022132	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCCTCTCTTTTCT	6372	False	NA	-8	True	AATAAA	-14	NA	72231171	72199031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72199757_72200473_72200656_72203021_72203189_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72230895
transcript_5836.known	chr1	+	503	3	FSM	ENSG00000130770.18	ENST00000335514.10	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	3693	junction_2	175	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGATGCCTTCTTC	-15	True	NA	15	True	AATAAA	-15	NA	28236123	28238100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28236271_28236360_28236453_28237836
transcript_5837.known	chr1	+	1855	2	FSM	ENSG00000130770.18	ENST00000465645.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4043	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTTGATGCCTTCT	15	True	NA	13	True	AATAAA	-13	NA	28236153	28238098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28236271_28236360
transcript_5838.known	chr1	+	539	3	FSM	ENSG00000130770.18	ENST00000468425.2	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_2	1975.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGATTGATTGATTGA	3	True	NA	NA	False	AATAAA	-34	NA	28236141	28246906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28236271_28236360_28236453_28246588
transcript_584.known	chr1	-	1040	3	FSM	ENSG00000188290.11	ENST00000428771.6	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	8	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGTCACGAGTTTTCT	640	False	NA	-4	True	NA	NA	NA	1000172	998961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_999433_999525_999614_999691
transcript_58429.known	chr15	-	2305	22	FSM	ENSG00000137817.17	ENST00000565443.5	2305	22	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_13	44.5630842820111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCTGTGGACTGGATA	1956	False	NA	-24	True	AATAAA	-13	NA	72271051	72241198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250958_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
transcript_58437.known	chr15	-	2271	21	FSM	ENSG00000137817.17	ENST00000567440.5	2271	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	47.965899345264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGTAAATAAAACAATAAA	1792	False	NA	-48	True	NA	NA	NA	72271215	72241222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259657_72260533_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
transcript_5844.known	chr1	+	3462	10	FSM	ENSG00000130766.5	ENST00000253063.4	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	22.7254140654124	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTTTATGGGCTGTT	3	True	NA	25	True	AATAAA	-25	NA	28259517	28282491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28259938_28269182_28269249_28271673_28271872_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_58444.known	chr15	-	2322	15	FSM	ENSG00000213614.11	ENST00000682721.1	2322	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	135.168677690401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-1	True	NA	-34	True	TTTAAA	-10	NA	72375987	72343453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72370430_72370525_72375719
transcript_58451.known	chr15	-	4785	14	FSM	ENSG00000213614.11	ENST00000268097.10	4785	14	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_6	37.7420394051718	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTAGCCGAGCCACC	-28	True	NA	-12	True	AATAAA	-28	NA	72376014	72340923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58457.known	chr15	-	1743	13	FSM	ENSG00000213614.11	ENST00000567411.5	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	107.288422281044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGCATTTTTCTATAAT	-17	True	NA	-52	True	AATAAA	-6	NA	72376003	72343907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72355558_72355625_72356524_72356618_72375719
transcript_58469.known	chr15	-	1582	13	FSM	ENSG00000213614.11	ENST00000567159.5	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	38.7230192808131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGATCCAGGGCTGGGG	-7	True	NA	NA	False	NA	NA	NA	72375993	72345410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58470.known	chr15	-	2075	12	FSM	ENSG00000213614.11	ENST00000684231.1	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	109.635986732354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-6	True	NA	-34	True	TTTAAA	-10	NA	72375992	72343453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72355558_72355625_72356524_72356618_72375719
transcript_58474.known	chr15	-	2855	12	FSM	ENSG00000213614.11	ENST00000683463.1	2855	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	115.920676782812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-17	True	NA	-34	True	TTTAAA	-10	NA	72376003	72343453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72346326_72346526_72346711_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58475.known	chr15	-	2451	12	FSM	ENSG00000213614.11	ENST00000684520.1	2451	12	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	40.4391186111862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAACAACTATTTACAT	-23	True	NA	-13	True	AATAAA	-7	NA	72376009	72345241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58478.known	chr15	-	3477	12	FSM	ENSG00000213614.11	ENST00000683853.1	3477	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	115.122715696866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTGTTCTCTAGGCA	-17	True	NA	-33	True	ATTAAA	-1	NA	72376003	72343452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72345551_72346234_72346326_72346526_72346711_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58482.known	chr15	-	1351	11	FSM	ENSG00000213614.11	ENST00000569410.5	1351	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	120.404692599583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTTTTCGGGGGGGA	11	True	NA	NA	False	NA	NA	NA	72375975	72346234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72346326_72346526_72346711_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58484.known	chr15	-	1512	11	FSM	ENSG00000213614.11	ENST00000567027.6	1512	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	120.04869845192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTACATAGCATTTA	-17	True	NA	-5	True	AATAAA	-15	NA	72376003	72345233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72345551_72346234_72346326_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58489.known	chr15	-	1397	10	FSM	ENSG00000213614.11	ENST00000566672.5	1397	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	119.55947948951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCTGAGAGAGAGCAGG	-17	True	NA	NA	False	NA	NA	NA	72376003	72346131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72355558_72355625_72356524_72356618_72375719
transcript_58495.known	chr15	-	2390	11	FSM	ENSG00000213614.11	ENST00000684415.1	2390	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.818061058285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAACAACTATTTACATA	-17	True	NA	-12	True	AATAAA	-8	NA	72376003	72345240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72346326_72346526_72346711_72348030_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58496.known	chr15	-	2953	13	FSM	ENSG00000213614.11	ENST00000684263.1	2953	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	112.282629506477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTAGGCACTGTGGT	-17	True	NA	-26	True	ATTAAA	-8	NA	72376003	72343445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72346326_72346526_72346711_72347685_72347759_72348030_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_58497.known	chr15	-	1795	14	FSM	ENSG00000213614.11	ENST00000566304.5	1795	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	104.539282274471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCATTCAATAAAGAGTAAT	-7	True	NA	-70	True	NA	NA	NA	72375993	72343925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356651_72375719
transcript_585.known	chr1	-	667	3	FSM	ENSG00000188290.11	ENST00000484667.2	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	38	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGAGTCTGCGTCACG	831	False	NA	-12	True	NA	NA	NA	999981	998969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_999433_999525_999614_999865
transcript_58502.known	chr15	+	21679	14	FSM	ENSG00000166233.15	ENST00000379887.9	21679	14	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	20.7333022571226	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCCCTTTTGTTGA	5	True	NA	NA	False	GATAAA	-6	NA	72474329	72602987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72475015_72518066_72518135_72544819_72544965_72555270_72555364_72555851_72555908_72561482_72561550_72563393_72563501_72566562_72566606_72567105_72567178_72570176_72570308_72572107_72572166_72580730_72580992_72582074_72582188_72583207
transcript_58508.known	chr15	+	1876	17	FSM	ENSG00000140463.14	ENST00000567279.5	1876	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	107.180757805448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACTGGCAGCAAGGCT	-5	True	NA	NA	False	NA	NA	NA	72686206	72737824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686252_72695176_72695229_72704423_72704482_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_58510.known	chr15	+	2467	16	FSM	ENSG00000140463.14	ENST00000268057.9	2467	16	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_6	28.4250280953638	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	-5	True	NA	15	True	AATAAA	-17	NA	72686206	72738473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_58516.known	chr15	+	1864	16	FSM	ENSG00000140463.14	ENST00000562084.5	1864	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	83.6799192691346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGAGAGAAATAAGAA	8	True	NA	NA	False	NA	NA	NA	72686219	72737570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686565_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_58520.known	chr15	+	2055	15	FSM	ENSG00000140463.14	ENST00000566400.5	2055	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	110.674670331839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAGAAAAAAAACAA	-3	True	NA	3	True	NA	NA	NA	72686185	72738087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686252_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722788_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_58540.known	chr15	-	2716	7	FSM	ENSG00000159322.18	ENST00000567941.5	2716	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	86.0982965375429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	3	True	NA	-12	True	ATTAAA	-19	NA	72783731	72751368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783245
transcript_58542.known	chr15	-	2557	7	FSM	ENSG00000159322.18	ENST00000311669.12	2557	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	54.4875113112068	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	NA	False	NA	-12	True	ATTAAA	-19	NA	72783785	72751368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_58547.known	chr15	-	2608	7	FSM	ENSG00000159322.18	ENST00000456471.3	2608	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	59.538969498043	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATGTGCATGTTACT	-24	True	NA	63	True	GATAAA	-18	NA	72783758	72751293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_58555.nic	chr15	-	2351	6	NIC	ENSG00000159322.18	novel	2557	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	95.2860955229041	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-42	True	NA	-12	True	ATTAAA	-19	NA	72783776	72751368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_72752893_72755555_72755655_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_58559.nic	chr15	-	2354	6	NIC	ENSG00000159322.18	novel	2557	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	97.8639872476081	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-42	True	NA	-12	True	ATTAAA	-19	NA	72783776	72751368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_72752896_72755555_72755655_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_58562.known	chr15	-	2262	5	FSM	ENSG00000159322.18	ENST00000569534.5	2262	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	82.8507694593116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-42	True	NA	-12	True	ATTAAA	-19	NA	72783776	72751368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72783458
transcript_58568.known	chr15	-	1041	5	FSM	ENSG00000159322.18	ENST00000563907.5	1041	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	118.611498177875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAAAGACCCCATTCGA	8	True	NA	NA	False	NA	NA	NA	72783623	72752429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_58572.known	chr15	-	951	4	FSM	ENSG00000159322.18	ENST00000569517.5	951	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	45.9202206731051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGTGGCTGCAGGAGC	19	True	NA	NA	False	NA	NA	NA	72783715	72752634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72755555_72755655_72760406_72760528_72783245
transcript_58584.known	chr15	-	858	6	FSM	ENSG00000156642.17	ENST00000565325.5	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	428.590900510032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTAAAATATTTAAAT	-2	True	NA	NA	False	NA	NA	NA	73633245	73560816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73633124
transcript_58601.known	chr15	+	3295	10	FSM	ENSG00000103855.18	ENST00000318443.10	3295	10	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	109.778677459201	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	-14	True	NA	18	True	AATAAA	-15	NA	73684382	73714514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_58604.known	chr15	+	2181	10	FSM	ENSG00000103855.18	ENST00000560928.5	2181	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	282.097697812497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTGAAGACAGGGCAC	1	True	NA	NA	False	NA	NA	NA	73684437	73713580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702379_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_58607.nic	chr15	+	3607	10	NIC	ENSG00000103855.18	novel	3295	10	NA	NA	19	0	intron_retention	FALSE	canonical	3	18	junction_1	276.322052220249	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	13	True	NA	18	True	AATAAA	-15	NA	73684409	73714514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_73684800_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_58609.known	chr15	+	2690	9	FSM	ENSG00000103855.18	ENST00000561213.5	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	116.04625963382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	73684390	73712154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134
transcript_58611.known	chr15	+	2439	9	FSM	ENSG00000103855.18	ENST00000537340.6	2439	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	291.732754417463	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCCTCTGCAGTGC	25	True	NA	NA	False	NA	NA	NA	73684268	73713677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_58615.known	chr15	+	2738	8	FSM	ENSG00000103855.18	ENST00000318424.9	2738	8	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	88.1406575321746	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTTTTCTCTGTGA	37	True	NA	13	True	AATAAA	-10	NA	73684280	73714509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_58621.known	chr15	+	1224	2	FSM	ENSG00000260469.3	ENST00000615095.1	1224	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73752316	73770613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73752397_73769469
transcript_58622.known	chr15	+	2786	8	FSM	ENSG00000129038.16	ENST00000566011.5	2786	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	51.9968601877821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAACCCACAGGCACGG	NA	False	NA	-94	True	NA	NA	NA	73925988	73951919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73927886_73941874_73942059_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_58624.known	chr15	+	2346	7	FSM	ENSG00000129038.16	ENST00000261921.8	2346	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	14.4990421139544	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGCTCTGCATGCGG	2	True	NA	11	True	AATAAA	-15	NA	73926461	73952136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73927886_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_58626.nnic	chr15	+	2212	6	NIC	ENSG00000129038.16	novel	2346	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	47.2355798101389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGCTCTGCATGCGG	-2	True	NA	11	True	AATAAA	-15	NA	73926457	73952136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_73927886_73942853_73942963_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_58630.known	chr15	-	533	3	FSM	ENSG00000261801.7	ENST00000562130.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATCAAGAAATAGGACAT	-24	True	NA	NA	False	NA	NA	NA	73926342	73919154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73919384_73919837_73920039_73926239
transcript_58631.known	chr15	-	588	3	FSM	ENSG00000261801.7	ENST00000565416.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACCTGGATCAAGAAATA	-1	True	NA	NA	False	NA	NA	NA	73927940	73919160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73919384_73919837_73920039_73927776
transcript_58632.known	chr15	-	1183	2	FSM	ENSG00000261801.7	ENST00000562965.1	1183	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGACTGACTTATGTGG	438	False	NA	NA	False	NA	NA	NA	73927960	73919039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73920039_73927776
transcript_58634.nic	chr15	-	2028	7	NIC	ENSG00000067221.14	novel	2169	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	5.13160143944688	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	2247	False	NA	-10	True	AATAAA	-20	NA	73992338	73983217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_58636.known	chr15	-	1833	7	FSM	ENSG00000067221.14	ENST00000561656.5	1833	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	7.71902411793961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTTTACAATGTATA	NA	False	NA	-29	True	AATAAA	-1	NA	73994622	73983236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73994550
transcript_58639.known	chr15	-	6280	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.13160143944688	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTCTTTGTTTGGACA	-3	True	NA	NA	False	AATAAA	-20	NA	73992295	73978925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_58642.known	chr15	-	1849	6	FSM	ENSG00000067221.14	ENST00000564777.5	1849	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	7.2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-5	True	NA	2	True	AATAAA	-32	NA	73992297	73983205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_58646.known	chr15	-	1891	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	7.2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	2237	False	NA	-10	True	AATAAA	-20	NA	73992348	73983217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_5865.nnic	chr1	+	2291	9	NIC	ENSG00000130766.5	novel	3462	10	NA	NA	-55	-1028	combination_of_known_splicesites	TRUE	canonical	3	7	junction_2	73.7842081681439	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATTATCTCTAGAGAGT	NA	False	NA	NA	False	CATAAA	-11	NA	28259462	28281463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_28259938_28269182_28269249_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_58653.known	chr15	-	2169	8	FSM	ENSG00000067221.14	ENST00000316900.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	8.95567315351856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	2237	False	NA	-10	True	AATAAA	-20	NA	73992348	73983217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73990814_73990946_73992090
transcript_58655.known	chr15	+	5565	9	FSM	ENSG00000140464.20	ENST00000268058.8	5565	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	45.7464137938702	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTTGTCTTCAGGGT	-20	True	NA	NA	False	AATAAA	-33	NA	73994715	74047827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74042988_74043140_74044220
transcript_58656.known	chr15	+	2251	8	FSM	ENSG00000140464.20	ENST00000569477.5	2251	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	46.6690475583121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTGCCCAGCTGCAAA	-5	True	NA	NA	False	NA	NA	NA	73994730	74035590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74035131
transcript_58657.nic	chr15	+	3104	8	NIC	ENSG00000140464.20	novel	3029	8	NA	NA	-5	-2	combination_of_known_junctions	TRUE	canonical	3	5	junction_7	46.9572102220387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTGCGAACCCTTAT	1788	False	NA	15	True	AATAAA	-15	NA	73994667	74036391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74035142
transcript_58658.known	chr15	+	3010	8	FSM	ENSG00000140464.20	ENST00000436891.7	3010	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	48.8671668914825	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	8	True	NA	18	True	AATAAA	-18	NA	73994743	74036394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74035171
transcript_58659.known	chr15	+	2148	8	FSM	ENSG00000140464.20	ENST00000569965.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	46.3672122015864	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	-3	True	NA	14	True	AATAAA	-14	NA	73994732	74043338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74042988
transcript_58660.known	chr15	+	5393	8	FSM	ENSG00000140464.20	ENST00000565898.5	5393	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	50.0155077991633	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAAACATGG	-7	True	NA	NA	False	AATAAA	-18	NA	73994728	74047812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988_74043140_74044220
transcript_58661.known	chr15	+	3643	7	FSM	ENSG00000140464.20	ENST00000435786.6	3643	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	28.6860399652669	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	8	True	NA	18	True	AATAAA	-18	NA	73994743	74036394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477
transcript_58663.nic	chr15	+	2960	7	NIC	ENSG00000140464.20	novel	2885	7	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_6	51.9853077534626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTGCGAACCCTTAT	1788	False	NA	15	True	AATAAA	-15	NA	73994667	74036391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74035142
transcript_58664.known	chr15	+	2885	7	FSM	ENSG00000140464.20	ENST00000354026.10	2885	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	43.8536074786201	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	-19	True	NA	18	True	AATAAA	-18	NA	73994716	74036394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74035171
transcript_58665.known	chr15	+	1985	7	FSM	ENSG00000140464.20	ENST00000564428.5	1985	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	38.9657969677682	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	8	True	NA	14	True	AATAAA	-14	NA	73994743	74043338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988
transcript_58670.known	chr15	+	1726	6	FSM	ENSG00000140464.20	ENST00000359928.8	1726	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	55.0512488505029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	8	True	NA	14	True	AATAAA	-14	NA	73994743	74043338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74034477_74034531_74042988
transcript_58671.known	chr15	+	2331	2	FSM	ENSG00000129009.13	ENST00000249842.8	2331	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTGTCTGCCTGGAAT	-15	True	NA	NA	False	AATAAA	-17	NA	74173709	74176871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74174020_74174850
transcript_58672.known	chr15	+	2175	2	FSM	ENSG00000129009.13	ENST00000395118.1	2175	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTCTGCCTGGAATT	561	False	NA	NA	False	AATAAA	-18	NA	74174500	74176872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74174654_74174850
transcript_58673.known	chr15	+	1346	5	FSM	ENSG00000140481.15	ENST00000560148.5	1346	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	NA	False	NA	6	True	AATAAA	-18	NA	74202704	74221557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74218496_74218862_74221249
transcript_58681.known	chr15	-	2565	19	FSM	ENSG00000137868.19	ENST00000563965.5	2565	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	17.7239636901256	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGGTCCTCCGGATCA	5	True	NA	NA	False	NA	NA	NA	74202858	74179974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202417
transcript_58683.known	chr15	-	2708	19	FSM	ENSG00000137868.19	ENST00000395105.9	2708	19	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	12.2075669712693	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-18	True	NA	-10	True	AATAAA	-16	NA	74202787	74179465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_58684.known	chr15	-	2864	19	FSM	ENSG00000137868.19	ENST00000323940.9	2864	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	18.5738432835261	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-1	True	NA	-10	True	AATAAA	-16	NA	74209030	74179465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_58685.known	chr15	-	2631	19	FSM	ENSG00000137868.19	ENST00000535552.5	2631	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_18	18.2300118851671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGCCACATCCAGGCGT	2553	False	NA	NA	False	AAGAAA	-41	NA	74209705	74179814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74209358
transcript_58720.nic	chr15	-	1856	6	NIC	ENSG00000137868.19	novel	1889	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_2	10.6695829346793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	5	True	NA	NA	False	AATAAA	-20	NA	74202858	74194386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_58721.known	chr15	-	1889	6	FSM	ENSG00000137868.19	ENST00000432245.6	1889	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	30.009331881933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	3280	False	NA	NA	False	AATAAA	-20	NA	74208978	74194386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_58729.known	chr15	-	596	2	FSM	ENSG00000137868.19	ENST00000573724.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGCAGAGTGTCCCCAG	9853	False	NA	NA	False	NA	NA	NA	74202405	74195330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74195676_74202154
transcript_58730.known	chr15	-	612	2	FSM	ENSG00000277749.1	ENST00000611006.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTAAACTGCATGT	5	True	NA	-16	True	AATAAA	-15	NA	74319688	74311515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74311959_74319519
transcript_58735.nnic	chr15	-	2110	9	NNC	ENSG00000140459.18	novel	1837	9	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	14.7388729216314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTGCGTTCCATCA	2986	False	NA	-21	True	AATAAA	-14	NA	74366253	74337761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74365650
transcript_58736.known	chr15	-	2001	9	FSM	ENSG00000140459.18	ENST00000358632.8	2001	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	9.00607433902252	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCGTTCCATCAGAC	-6	True	NA	-18	True	AATAAA	-17	NA	74366206	74337758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74365715
transcript_58742.known	chr15	+	915	4	FSM	ENSG00000260266.1	ENST00000564109.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.23609564462324	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTGGTGGATGGCAA	11	False	NA	NA	False	AATACA	-33	NA	74350767	74361903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74350940_74354525_74354686_74356282_74356476_74361513
transcript_58744.known	chr15	+	4946	3	FSM	ENSG00000261821.2	ENST00000568496.2	4946	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTCGTTGCTTTGTCT	5801	False	NA	NA	False	AATAAA	-20	NA	74365434	74371211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74365506_74365661_74366033_74366707
transcript_58745.known	chr15	-	3376	14	FSM	ENSG00000138623.10	ENST00000261918.9	3376	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1.18671143234935	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGCCTGTTCCTTGCCT	-5	True	NA	-5	True	AATAAA	-16	NA	74433958	74409288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74410986_74411294_74411357_74411555_74411711_74411884_74412013_74414546_74414746_74414837_74414947_74415800_74415986_74416574_74416715_74417334_74417446_74417590_74417676_74417876_74417970_74418267_74418310_74418800_74418953_74433740
transcript_58747.known	chr15	-	1477	12	FSM	ENSG00000138629.16	ENST00000564488.5	1477	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	252.587796699133	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	35	True	NA	-7	True	AATATA	-17	NA	74461118	74445977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461036
transcript_58752.known	chr15	-	1720	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_10	186.135864357195	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	51	False	NA	-6	True	AATATA	-18	NA	74461102	74445976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
transcript_58753.known	chr15	-	1409	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_10	117.606802524344	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-7	True	NA	-6	True	AATATA	-18	NA	74461160	74445976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_58754.known	chr15	-	1360	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_10	135.672583818545	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-29	True	NA	-6	True	AATATA	-18	NA	74461182	74445976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_58755.nnic	chr15	-	1317	11	NNC	ENSG00000138629.16	novel	1477	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_10	202.626355640129	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	-37	True	NA	-7	True	AATATA	-17	NA	74461190	74445977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461157
transcript_58759.nnic	chr15	-	1303	10	NIC	ENSG00000138629.16	novel	1409	11	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	227.480619171756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTGTCCAGTTCTT	-26	True	NA	-8	True	AATATA	-16	NA	74461179	74445978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74446228_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_58760.nnic	chr15	-	1245	10	NIC	ENSG00000138629.16	novel	1360	11	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	236.351172079196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTGTCCAGTTCTT	-39	False	NA	-8	True	AATATA	-16	NA	74461192	74445978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74446228_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_58775.known	chr15	+	1333	4	FSM	ENSG00000247240.9	ENST00000499217.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	17.1529071070248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCATTTTCATCCATTC	0	True	NA	27	True	AATAAA	-32	NA	74461264	74481302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74462032_74466035_74466131_74479059_74479279_74481050
transcript_58776.known	chr15	+	1344	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	42	5	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.8012344973464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	6	True	NA	13	True	AATAAA	-18	NA	74461306	74481288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
transcript_58777.known	chr15	+	1251	3	FSM	ENSG00000247240.9	ENST00000659591.2	1300	3	45	4	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	6	True	NA	15	True	AATAAA	-20	NA	74461306	74481290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74462099_74479059_74479279_74481050
transcript_58787.known	chr15	+	4228	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_7	73.904393475625	1343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCTCTCAGTTGCT	3	True	NA	27	True	AATAAA	-20	NA	74541219	74598131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
transcript_5879.nnic	chr1	+	1353	4	NNC	ENSG00000130772.14	novel	1106	4	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCTGTGTAATTCTG	NA	False	NA	9	True	AATAAA	-12	NA	28328965	28335963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335161_28335708
transcript_588.known	chr1	-	1038	2	FSM	ENSG00000188290.11	ENST00000481869.1	1038	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTGCGTCACGAGTT	-1	True	NA	-8	True	NA	NA	NA	1000096	998965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_999433_999525
transcript_5883.known	chr1	+	1829	3	FSM	ENSG00000130772.14	ENST00000373842.9	1829	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	-17	True	NA	11	True	AATAAA	-14	NA	28329039	28335965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28329181_28330596_28330736_28334416
transcript_58836.nic	chr15	+	1802	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	62.7393195868605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	2	True	NA	19	True	AATAAA	-19	NA	74615844	74630116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615899_74619196_74619349_74619966_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_58838.known	chr15	+	1854	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	32.9582016432262	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	-7	True	NA	12	True	AATAAA	-19	NA	74615835	74630201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_58841.nic	chr15	+	1766	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	61.5067182419034	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	-7	True	NA	19	True	AATAAA	-19	NA	74615889	74630116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_58845.nic	chr15	+	2989	12	ISM	ENSG00000179335.20	ENST00000395066.9	1854	13	-544	83	463	0	intron_retention	TRUE	canonical	3	146	junction_3	34.2817687615661	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	388	False	NA	21	True	AATAAA	-21	NA	74615291	74630118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
transcript_58849.nic	chr15	+	1672	12	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	54.6314473661674	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	-7	True	NA	19	True	AATAAA	-19	NA	74615835	74630116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_58851.known	chr15	+	3787	12	FSM	ENSG00000179335.20	ENST00000454830.6	3787	12	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	28.112818757862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGGAGAGCTAAGTG	892	False	NA	11	True	AATAAA	-18	NA	74615795	74630200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74615899_74619196_74619349_74620008_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_58857.nic	chr15	+	2370	11	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	52	junction_3	57.0316578752538	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	-29	True	NA	21	True	AATAAA	-21	NA	74615813	74630118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
transcript_58867.known	chr15	-	3810	9	FSM	ENSG00000179151.13	ENST00000647659.1	3810	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	131.344430315868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGACTGACTGAGTC	83	False	NA	-19	True	AATAAA	-1	NA	74695936	74630574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
transcript_58872.nic	chr15	-	3841	8	NIC	ENSG00000179151.13	novel	3810	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	132.101074475384	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCGTGTGACTTG	-20	True	NA	-2	True	AATAAA	-18	NA	74696039	74630557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74695879
transcript_58873.known	chr15	-	1825	8	FSM	ENSG00000179151.13	ENST00000568176.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	109.361411692365	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGGACCTTGTTAAA	19	True	NA	-37	True	NA	NA	NA	74696000	74632541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74687090_74687180_74695879
transcript_58878.known	chr15	-	3744	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	44.4800204836084	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCGTGTGACTTG	-5	True	NA	-2	True	AATAAA	-18	NA	74696024	74630557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_58891.nic	chr15	-	3297	5	ISM	ENSG00000179151.13	ENST00000315127.9	3744	7	-21	7769	-16	2234	5prime_fragment	FALSE	canonical	3	232	junction_4	51.1395150544078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTGAAGTTCAGAAAAGG	-26	True	NA	NA	False	NA	NA	NA	74696045	74638326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_58892.known	chr15	-	2603	7	FSM	ENSG00000140465.15	ENST00000379727.8	2603	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGGAGATTTTTTGAAT	0	True	NA	NA	False	AATAAA	-21	NA	74725528	74719541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74720775_74720966_74721054_74721198_74721323_74721413_74721504_74721590_74721718_74722272_74723127_74725440
transcript_58895.known	chr15	+	1900	14	FSM	ENSG00000103653.17	ENST00000439220.6	1900	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	33.9060658551703	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGGCATTTTACAAGAA	-29	True	NA	NA	False	AAGAAA	-10	NA	74782088	74802882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74782149_74782667_74782721_74798232_74798313_74798614_74798729_74798825_74798939_74799271_74799492_74800411_74800506_74800680_74800747_74800822_74800923_74801011_74801103_74801521_74801596_74801694_74801891_74801996_74802084_74802330
transcript_58899.known	chr15	-	2674	17	FSM	ENSG00000140474.14	ENST00000647587.1	2674	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	69.077826353686	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTTCTCTATTTGCG	26	True	NA	-17	True	NA	NA	NA	74843124	74836131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534_74842675_74843003
transcript_589.known	chr1	+	637	2	FSM	ENSG00000187608.10	ENST00000649529.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGCCTCTGTGTCTGTG	1	True	NA	9	True	AATAAA	-19	NA	1013496	1014540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1013577_1013983
transcript_58901.known	chr15	-	1633	16	FSM	ENSG00000140474.14	ENST00000566631.5	1633	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	61.1749404031858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTACTCGGTGGTTACTG	9	True	NA	NA	False	NA	NA	NA	74843141	74836972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842119_74842279_74842421_74843003
transcript_58905.known	chr15	-	2611	16	FSM	ENSG00000140474.14	ENST00000569437.5	2611	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	22.2854212434946	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	1883	False	NA	-3	True	ATTAAA	-13	NA	74843193	74836117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_58911.nic	chr15	-	2708	15	NIC	ENSG00000140474.14	novel	2611	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	112	junction_11	22.8432993792625	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	1870	False	NA	-3	True	ATTAAA	-13	NA	74843206	74836117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842421_74843003
transcript_58914.known	chr15	-	2951	15	FSM	ENSG00000140474.14	ENST00000570276.5	2951	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	48.2269295590532	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	1730	False	NA	-3	True	ATTAAA	-13	NA	74843346	74836117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_58923.nic	chr15	-	2933	14	NIC	ENSG00000140474.14	novel	2738	15	NA	NA	6	0	intron_retention	FALSE	canonical	3	166	junction_3	15.1078959723073	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	0	True	NA	-3	True	ATTAAA	-13	NA	74843150	74836117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_58926.known	chr15	-	1565	14	FSM	ENSG00000140474.14	ENST00000565881.5	1565	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	76.6835501519415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTGGAGCAGAGGGGCA	26	True	NA	NA	False	NA	NA	NA	74843124	74837198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841506_74842074_74842196_74842279_74842421_74843003
transcript_5894.known	chr1	+	6048	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	15.7254551866839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	44	True	NA	18	True	ATTAAA	-25	NA	28369739	28500364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_58952.known	chr15	-	858	9	FSM	ENSG00000140497.16	ENST00000569904.5	858	9	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_3	145.307809064069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGACGGACAGGGGCCAG	46	False	NA	NA	False	NA	NA	NA	74873302	74845205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848646_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_58953.known	chr15	-	2453	9	FSM	ENSG00000140497.16	ENST00000268099.13	2453	9	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	13.4158255429921	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGTCCACATGTCTGGT	-17	True	NA	-7	True	AATAAA	-16	NA	74873365	74843729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_58972.known	chr15	+	5793	8	FSM	ENSG00000178802.18	ENST00000352410.9	5793	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	28.8118456364668	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTCCATTCAACA	-7	True	NA	NA	False	AATAAA	-14	NA	74890041	74902219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_58975.nic	chr15	+	1914	8	NIC	ENSG00000178802.18	novel	5793	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	50.4942914534678	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	-7	True	NA	18	True	ATTAAA	-17	NA	74890041	74898228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_58977.known	chr15	+	1707	8	FSM	ENSG00000178802.18	ENST00000563786.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	52.2814205887284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCAGCATTAGCTCAG	-7	True	NA	NA	False	NA	NA	NA	74890041	74898044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890437_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_58993.known	chr15	+	2809	7	FSM	ENSG00000178802.18	ENST00000566377.5	2809	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	42.4486618032758	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCTAAAGGGAACCCA	-10	True	NA	6	True	AATAAA	-19	NA	74890038	74899441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897511
transcript_58997.known	chr15	+	1523	7	FSM	ENSG00000178802.18	ENST00000535694.5	1523	7	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	46.8997157063167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACCAGGTAATTTCTA	-7	True	NA	NA	False	NA	NA	NA	74890041	74898077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_59.known	ERCC-00165	+	856	1	FSM	ERCC-00165A	DQ668363	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00165_+_0_900
transcript_59004.known	chr15	-	865	7	FSM	ENSG00000178761.15	ENST00000563671.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.3434398355838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	18	True	NA	-11	True	AATAAA	-14	NA	74906793	74899991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74900138_74901949_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_59013.known	chr15	+	1481	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	22.8508205541945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	-7	True	NA	NA	False	AATACA	-39	NA	74890041	74896930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_59019.known	chr15	+	851	6	FSM	ENSG00000178802.18	ENST00000561470.5	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	57.6804993043576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTACAGCTGCACC	-7	True	NA	NA	False	NA	NA	NA	74890041	74896188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_59023.known	chr15	+	1052	6	FSM	ENSG00000178802.18	ENST00000562606.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.1993464017386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTACTCTGATTT	4	True	NA	NA	False	NA	NA	NA	74890052	74896538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890552_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_59026.known	chr15	-	2721	6	FSM	ENSG00000178761.15	ENST00000563119.5	2721	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.6383532156513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	415	False	NA	-11	True	AATAAA	-14	NA	74906837	74899991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_59027.known	chr15	-	568	6	FSM	ENSG00000178761.15	ENST00000564019.1	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.2366931756041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCATCCCCCCTAAGC	4	True	NA	NA	False	NA	NA	NA	74906807	74902709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902784_74904663_74904713_74904981_74905040_74905153_74905232_74906277_74906366_74906586
transcript_59028.known	chr15	-	1552	6	FSM	ENSG00000178761.15	ENST00000563069.5	1552	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.4070024577422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGAAGGTACTGGGGCTG	4	True	NA	NA	False	NA	NA	NA	74906880	74901821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902787_74904663_74904713_74904981_74905060_74905153_74905232_74906277_74906366_74906586
transcript_59033.known	chr15	+	1148	5	FSM	ENSG00000178802.18	ENST00000565576.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	24.2834820402676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGGTGTGGTCACTG	13	True	NA	10	True	NA	NA	NA	74890061	74893786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137
transcript_59037.known	chr15	-	673	5	FSM	ENSG00000178761.15	ENST00000563413.5	673	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	54.5825063550585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGTTAGAGAAAAACTGCT	6	True	NA	NA	False	NA	NA	NA	74906805	74901919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906586
transcript_59039.known	chr15	-	1145	5	FSM	ENSG00000178761.15	ENST00000570143.5	1145	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.6448608219134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGCATAAAGTGAGTCC	8	True	NA	NA	False	NA	NA	NA	74906842	74902099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902784_74904663_74904713_74904981_74905060_74905153_74905232_74906586
transcript_59042.known	chr15	-	587	5	FSM	ENSG00000178761.15	ENST00000562698.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.9872347679497	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCATCCCCCCTAAGCC	1	True	NA	NA	False	NA	NA	NA	74906883	74902708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902784_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_59043.known	chr15	-	699	5	FSM	ENSG00000178761.15	ENST00000566194.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.1152729145381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGACCTGCAGGTAG	2	True	NA	NA	False	NA	NA	NA	74906848	74902515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902784_74904663_74904713_74905153_74905232_74906323_74906366_74906586
transcript_59049.known	chr15	-	742	4	FSM	ENSG00000178761.15	ENST00000563877.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.2812245438193	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCATCTGGGCTGTGG	1	True	NA	NA	False	NA	NA	NA	74906883	74902468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902787_74904663_74904713_74905153_74905232_74906586
transcript_59051.known	chr15	-	1057	4	FSM	ENSG00000178761.15	ENST00000564857.1	1057	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.5938450837779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACTGACCCCTAGAAAG	522	False	NA	NA	False	NA	NA	NA	74906730	74902529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902787_74904663_74905232_74906277_74906366_74906586
transcript_59055.known	chr15	-	4706	3	FSM	ENSG00000178761.15	ENST00000566894.1	4706	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGAGCTGTGTCTGTGTT	15	True	NA	-12	True	AATAAA	-13	NA	74906796	74899992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902787_74904663_74906366_74906586
transcript_59060.known	chr15	-	1173	5	FSM	ENSG00000178741.12	ENST00000322347.11	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	3850	junction_2	110.338966371813	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGTCTTAGAAGCG	5	True	NA	38	True	ATTAAA	-18	NA	74938073	74919790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937914
transcript_59061.known	chr15	-	579	4	FSM	ENSG00000178741.12	ENST00000567270.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	1672.07263265951	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-2	True	NA	-6	True	AATAAA	-24	NA	74938080	74920274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74937914
transcript_59063.known	chr15	-	571	4	FSM	ENSG00000178741.12	ENST00000568783.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	1881.93346204258	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTAGGTATTTGTTTC	-5	True	NA	-11	True	AATAAA	-19	NA	74938083	74920279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74926765_74926888_74929115_74929233_74937914
transcript_59065.known	chr15	-	441	3	FSM	ENSG00000178741.12	ENST00000562233.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	2038.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	8	True	NA	-6	True	AATAAA	-24	NA	74938070	74920274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74929115_74929233_74937914
transcript_59066.known	chr15	-	2355	1	FSM	ENSG00000178718.7	ENST00000322177.6	2355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACGTTCTGTGGCTGACT	-3	True	NA	-1	True	AATAAA	-18	NA	74956772	74954417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74954400_74956800
transcript_5907.known	chr1	+	918	7	FSM	ENSG00000204138.13	ENST00000632202.1	918	7	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_3	30.4448499567478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAGCCTTGCAAAGAC	-1	True	NA	NA	False	NA	NA	NA	28369608	28466584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28369826_28407409_28407464_28457831_28457856_28459084_28459259_28460211_28460293_28465684_28465850_28466381
transcript_59070.nic	chr15	+	3470	8	NIC	ENSG00000198794.12	novel	3427	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.94532915619566	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTGCTGTGTCATGT	-33	True	NA	12	True	AATAAA	-19	NA	74995537	75021493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74995674_75007660_75007729_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
transcript_59071.known	chr15	+	3427	8	FSM	ENSG00000198794.12	ENST00000361900.10	3427	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.0810847582265	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCTGTGTCATGTGT	27	True	NA	14	True	AATAAA	-21	NA	74995597	75021495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_74997233_74997317_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
transcript_59073.known	chr15	+	3379	7	FSM	ENSG00000198794.12	ENST00000425597.8	3379	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.43905629069357	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCTGTGTCATGTGT	-8	True	NA	14	True	AATAAA	-21	NA	74995562	75021495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
transcript_5908.nic	chr1	+	327	3	ISM	ENSG00000204138.13	ENST00000463428.5	1421	6	-42	8013	-13	-11	5prime_fragment	FALSE	canonical	3	48	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGTGATAAATTTAAAGAG	1	True	NA	23	True	NA	NA	NA	28369696	28459228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28369826_28407409_28407464_28459084
transcript_59088.known	chr15	+	1206	6	FSM	ENSG00000198794.12	ENST00000562765.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.05941170815567	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGGTGGGTACAGGCC	2	True	NA	NA	False	NA	NA	NA	74995572	75019489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75017869_75017972_75018417_75018536_75018788
transcript_59096.known	chr15	+	593	3	FSM	ENSG00000198794.12	ENST00000567535.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCACTGGAGTAACTT	13	True	NA	NA	False	NA	NA	NA	74995583	75013124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_75011791_75011847_75012676
transcript_59097.known	chr15	+	2215	6	FSM	ENSG00000138621.12	ENST00000342932.8	2215	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	37.2397636942019	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGAACCAACTTCTT	-9	True	NA	NA	False	AATAAA	-18	NA	75023589	75050726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_591.known	chr1	+	7326	36	FSM	ENSG00000188157.15	ENST00000379370.7	7326	36	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_5	64.4854294569316	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGCTTTTGTCCATCCT	21	True	NA	29	True	AATAAA	-18	NA	1020119	1056116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1020374_1022200_1022463_1035276_1035325_1040664_1040881_1041172_1041398_1041477_1041703_1041955_1042163_1043238_1043458_1043537_1043733_1043822_1044024_1044108_1044258_1044333_1044440_1045160_1045278_1045358_1045524_1045732_1045877_1045963_1046089_1046159_1046266_1046396_1046736_1046819_1046958_1047326_1047455_1047572_1047688_1047775_1047896_1048011_1048366_1048866_1049060_1049235_1049452_1049565_1049796_1049902_1050038_1050232_1050330_1050426_1050592_1050725_1050838_1051252_1051370_1051452_1051646_1051727_1051816_1053752_1053978_1054447_1054552_1054823
transcript_59100.known	chr15	+	926	5	FSM	ENSG00000138621.12	ENST00000568649.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	50.0118735901786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGTCCTGGCTGAG	6	True	NA	NA	False	NA	NA	NA	75023604	75049581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75048552_75048722_75049149
transcript_59102.known	chr15	+	464	5	FSM	ENSG00000138621.12	ENST00000569562.5	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	42.4882336653337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACAAAGTGAAAGAAGTC	-9	True	NA	NA	False	NA	NA	NA	75023589	75049182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_59104.known	chr15	+	1127	4	FSM	ENSG00000138621.12	ENST00000568207.5	1127	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	29.4882274061286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGGTGTGATTTCT	-13	True	NA	NA	False	NA	NA	NA	75023585	75045168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385
transcript_59106.known	chr15	+	757	4	FSM	ENSG00000138621.12	ENST00000564923.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	53.0722777603022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGTTGTCCTCAC	-12	True	NA	NA	False	NA	NA	NA	75023586	75049490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75048552_75048722_75049149
transcript_59108.known	chr15	+	892	4	FSM	ENSG00000138621.12	ENST00000567336.1	892	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	56.4092191046818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCTCTACATCTCACCCA	4650	False	NA	NA	False	NA	NA	NA	75028248	75049538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75028454_75044385_75044515_75048552_75048722_75049149
transcript_59109.nnic	chr15	+	826	3	NIC	ENSG00000138621.12	novel	926	5	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	63.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAGACTCCATTCTTT	-3	True	NA	12	True	AATAAA	-13	NA	75023558	75049738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_75023627_75048552_75048722_75049149
transcript_59113.known	chr15	+	4425	3	FSM	ENSG00000167173.19	ENST00000394987.5	4425	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	1	True	NA	28	True	ATTAAA	-22	NA	75201881	75212169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75202060_75205998_75208825_75210748
transcript_59120.known	chr15	+	4249	2	FSM	ENSG00000167173.19	ENST00000567617.1	4249	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	22	False	NA	28	True	ATTAAA	-22	NA	75206048	75212169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75208877_75210748
transcript_59123.known	chr15	+	895	8	FSM	ENSG00000140365.16	ENST00000267935.13	895	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	175.153693442447	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	-1	True	NA	NA	False	AATAAA	-17	NA	75336062	75340273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_59127.nnic	chr15	+	1012	8	NIC	ENSG00000140365.16	novel	895	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	257.188011908385	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	0	True	NA	NA	False	AATAAA	-17	NA	75336083	75340273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_75336231_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_59128.known	chr15	+	722	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	313.144624024676	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	-5	True	NA	NA	False	AATAAA	-17	NA	75336058	75340273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_59133.known	chr15	+	639	7	FSM	ENSG00000140365.16	ENST00000564815.5	639	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	311.649197371375	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGGAGGCAGCCCTGGTT	17	False	NA	NA	False	NA	NA	NA	75336052	75340073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_59140.known	chr15	+	677	6	FSM	ENSG00000140365.16	ENST00000567195.5	677	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	342.760207725459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTGCAGGGGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	75336019	75340270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339964
transcript_59145.known	chr15	+	926	4	FSM	ENSG00000140365.16	ENST00000567023.5	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	228.162222990573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCATGGAGAGTCCAG	-4	True	NA	NA	False	NA	NA	NA	75336059	75339400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645
transcript_59148.known	chr15	+	490	3	FSM	ENSG00000140365.16	ENST00000566230.5	490	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	250.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGGGGCCCCCCACCC	-1	True	NA	NA	False	NA	NA	NA	75336062	75338746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338421_75338645
transcript_59150.known	chr15	+	2284	2	FSM	ENSG00000140365.16	ENST00000566843.1	2284	2	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	75336020	75340273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061
transcript_59152.known	chr15	+	1897	3	FSM	ENSG00000140365.16	ENST00000563220.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGCAGGGGGTTC	1978	False	NA	NA	False	AATAAA	-13	NA	75338061	75340269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75338421_75338645_75339879_75339964
transcript_59154.nnic	chr15	-	3219	26	NIC	ENSG00000140400.18	novel	3177	26	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.3741071537501	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	8230	False	NA	-5	True	AATAAA	-16	NA	75368627	75355791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75356033_75356109_75356220_75356293_75356381_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_59160.nnic	chr15	-	3288	26	NIC	ENSG00000140400.18	novel	3261	26	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.5757501508184	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	8230	False	NA	-5	True	AATAAA	-16	NA	75368627	75355791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75356033_75356109_75356220_75356293_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_59167.nnic	chr15	-	3312	26	NNC	ENSG00000140400.18	novel	3261	26	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5903035594552	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	8230	False	NA	-5	True	AATAAA	-16	NA	75368627	75355791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_75356033_75356109_75356220_75356293_75356474_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_5917.known	chr1	+	2686	14	FSM	ENSG00000180198.17	ENST00000649185.1	2686	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	240.374215159633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAGTTTTATAAAAT	NA	False	NA	83	True	NA	NA	NA	28505979	28538968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_5919.known	chr1	+	2844	13	FSM	ENSG00000180198.17	ENST00000373833.10	2844	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	215.266824094089	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTGAGACAGA	10	False	NA	NA	False	AATAGA	-37	NA	28506056	28539300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829_28508902_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_5922.known	chr1	+	2715	12	FSM	ENSG00000180198.17	ENST00000398958.6	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	175.685152267551	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTGGGTATTTCT	NA	False	NA	26	True	NA	NA	NA	28505942	28539196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_59227.known	chr15	-	6723	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_20	40.2807646402101	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTATTTTTTTTTGT	3	True	NA	-9	True	ATTAAA	-14	NA	75451690	75369378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_59228.known	chr15	-	5050	21	FSM	ENSG00000169375.16	ENST00000360439.8	5050	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_20	69.5284833719246	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTCTCAACCCACG	-4	True	NA	38	True	AATAAA	-23	NA	75455783	75370932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455634
transcript_59286.known	chr15	+	3711	10	FSM	ENSG00000140398.14	ENST00000355059.9	3711	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.3112068961068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAATGATCATGAGTATCA	-20	True	NA	NA	False	AATAAA	-18	NA	75347038	75357115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75347474_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_59290.nic	chr15	+	1784	10	NIC	ENSG00000140398.14	novel	1797	10	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_1	10.7955180457699	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	0	True	NA	21	True	AATAAA	-15	NA	75347623	75355247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_75348000_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_5932.nnic	chr1	+	2306	10	NNC	ENSG00000180198.17	novel	2424	10	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	150.094126845724	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACTTGTTTTCTACACA	22	False	NA	-91	True	AATAAA	-20	NA	28518302	28538989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_28518352_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_59320.known	chr15	-	4078	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATTGTCATGATATTT	-4	True	NA	NA	False	ATTAAA	-20	NA	75451664	75419209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75422824_75430186_75430409_75451422
transcript_59323.known	chr15	+	1430	1	FSM	ENSG00000260274.1	ENST00000563278.1	1430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAGGTAAAACTTACTC	48	False	NA	NA	False	AATAAA	-23	NA	75368154	75369584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75368200_75369600
transcript_59324.known	chr15	+	1797	10	FSM	ENSG00000140398.14	ENST00000569035.5	1797	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9.39398283904367	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	14	False	NA	21	True	AATAAA	-15	NA	75347637	75355247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75348027_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_59325.known	chr15	-	3261	26	FSM	ENSG00000140400.18	ENST00000267978.10	3261	26	0	0	0	0	multi-exon	FALSE	canonical	2	119	junction_9	23.1428952380639	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-7	True	NA	-5	True	AATAAA	-16	NA	75368607	75355791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_59326.known	chr15	-	2961	24	FSM	ENSG00000140400.18	ENST00000563622.5	2961	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	39.5979797464467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-4	True	NA	-5	True	AATAAA	-16	NA	75368604	75355791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_59327.known	chr15	-	3177	26	FSM	ENSG00000140400.18	ENST00000569482.5	3177	26	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_3	33.0901798121437	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	8	True	NA	-5	True	AATAAA	-16	NA	75368592	75355791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356381_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_59331.known	chr15	-	7839	13	FSM	ENSG00000169410.11	ENST00000618819.5	7839	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_11	27.5418872910982	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGAAGTCTGGAGTC	-24	True	NA	1	True	AATAAA	-20	NA	75579315	75463250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75468984_75469791_75470000_75470679_75470831_75473688_75473768_75479847_75479915_75490207_75490302_75505674_75506004_75508916_75509028_75517258_75517365_75523120_75523246_75524208_75524299_75527117_75527262_75578713
transcript_59332.nnic	chr15	-	3962	12	NIC	ENSG00000169410.11	novel	7839	13	NA	NA	-143	1734	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	74.1200723418896	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTTTTAGCTTCATC	-12	True	NA	-8	True	TATAAA	-16	NA	75579458	75467126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75468984_75469791_75470000_75470679_75470831_75473688_75473768_75479847_75479915_75490207_75490302_75505674_75506004_75508916_75509028_75517258_75517365_75523120_75523246_75524208_75524299_75578713
transcript_59336.nic	chr15	-	1864	10	NIC	ENSG00000169371.14	novel	1641	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	100.394776313866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	25	True	NA	NA	False	AATATA	-17	NA	75625690	75598085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625335
transcript_59337.known	chr15	-	1641	10	FSM	ENSG00000169371.14	ENST00000567134.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	102.292608617523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTGGTTCTTAAGC	-6	True	NA	NA	False	AATATA	-20	NA	75625794	75598082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625665
transcript_59338.known	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	73.6355043440323	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	22	True	NA	NA	False	NA	NA	NA	75625693	75598121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
transcript_59339.known	chr15	-	1420	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_8	44.5897970392331	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	-10	True	NA	NA	False	AATATA	-17	NA	75625725	75598085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
transcript_59347.known	chr15	+	8002	2	FSM	ENSG00000173548.9	ENST00000308527.6	8002	2	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	0	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCTTTCTGTTGGT	-6	True	NA	9	True	ATTAAA	-16	NA	75647911	75662301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75650574_75656961
transcript_59348.known	chr15	-	1132	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAATCTGTCTGGTTT	-14	True	NA	-25	True	AATAAA	-26	NA	75640224	75639092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75639100_75640200
transcript_59349.known	chr15	-	8290	10	FSM	ENSG00000173546.7	ENST00000308508.5	8290	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	3.12694383988229	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGCCTGAGTTTCGA	-6	True	NA	NA	False	AATAAA	-17	NA	75712848	75674321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75677385_75677702_75677887_75682292_75682460_75682606_75682742_75682842_75683042_75684735_75684913_75685218_75685702_75687275_75690813_75693069_75693234_75712667
transcript_59354.known	chr15	+	2968	13	FSM	ENSG00000140367.12	ENST00000267938.9	2968	13	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	22.7370231609642	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTCATTTTTCC	0	True	NA	67	True	TTTAAA	-37	NA	75843446	75901078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75843847_75854385_75854488_75859877_75859983_75868950_75869011_75873427_75873569_75876186_75876272_75877960_75878022_75879097_75879189_75883365_75883425_75890434_75890484_75890918_75891015_75896994_75897062_75899426
transcript_5936.known	chr1	+	2201	3	FSM	ENSG00000242125.3	ENST00000413987.1	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	97	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	NA	False	NA	24	True	AGTAAA	-17	NA	28505979	28510892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829
transcript_59360.known	chr15	+	2969	12	FSM	ENSG00000140367.12	ENST00000569423.5	2969	12	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_2	33.1936467086426	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGTGCTGATCATG	145	False	NA	33	True	AATAAA	-15	NA	75843306	75901044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75843847_75854385_75854488_75868950_75869011_75873427_75873569_75876186_75876272_75877960_75878022_75879097_75879189_75883365_75883425_75890434_75890484_75890918_75891015_75896994_75897062_75899426
transcript_5937.known	chr1	+	185	2	FSM	ENSG00000242125.3	ENST00000447507.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTTAATCATTCTCAG	-4	True	NA	NA	False	NA	NA	NA	28506042	28508270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127
transcript_59373.known	chr15	+	10707	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	212.144146487451	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	-1	True	NA	8	True	AATAAA	-15	NA	75903877	75942511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_59380.known	chr15	+	725	6	FSM	ENSG00000167196.14	ENST00000565036.5	725	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	286.219076932339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCGATGCAGCGCCTCA	56	False	NA	NA	False	NA	NA	NA	75903981	75932798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75929883_75930050_75932684
transcript_59382.known	chr15	+	2164	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	204.713849067424	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGTGCAGGTATGAC	-1	True	NA	21	True	AATAAA	-15	NA	75903877	75934107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_5939.known	chr1	+	2424	10	FSM	ENSG00000180198.17	ENST00000373832.5	2424	10	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	57.2572708197692	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	6138	False	NA	-97	True	AATAAA	-14	NA	28518135	28538983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28518309_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_59392.known	chr15	+	2292	11	FSM	ENSG00000169758.13	ENST00000484722.5	2292	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAGTTGGTGGAGGTT	3	True	NA	6	True	AATAAA	-17	NA	76059957	76204962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76060017_76134167_76134302_76137706_76137896_76156603_76156653_76160094_76160169_76169815_76169873_76170992_76171132_76175558_76175675_76191967_76192158_76202201_76202265_76203740
transcript_59393.known	chr15	+	2372	11	FSM	ENSG00000169758.13	ENST00000388942.8	2372	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.67630546142402	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCAGTTGGTGGAGGTTT	2	True	NA	7	True	AATAAA	-18	NA	76059984	76204963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76060017_76134167_76134302_76137706_76137896_76156603_76156759_76160094_76160169_76169815_76169873_76170992_76171132_76175558_76175675_76191967_76192158_76202201_76202265_76203740
transcript_59394.nnic	chr15	+	2278	11	NNC	ENSG00000169758.13	novel	2292	11	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.6	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAGTTGGTGGAGGTT	-10	True	NA	6	True	AATAAA	-17	NA	76059944	76204962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_76060017_76134194_76134302_76137706_76137896_76156603_76156653_76160094_76160169_76169815_76169873_76170992_76171132_76175558_76175675_76191967_76192158_76202201_76202265_76203740
transcript_5940.known	chr1	+	1577	11	FSM	ENSG00000180198.17	ENST00000373831.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	163.99649386496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTCCTCTTTGGAAT	15	True	NA	22	True	NA	NA	NA	28518256	28538164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28518309_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_59402.known	chr15	-	2289	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	0	0	0	0	multi-exon	TRUE	canonical	3	732	junction_11	104.943274720636	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCATTTCAGTCTTC	23	False	76311492	1	True	TATAAA	-19	NA	76311469	76215352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_59407.known	chr15	-	1346	11	FSM	ENSG00000140374.17	ENST00000433983.6	1346	11	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_10	238.363189272169	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAAAAAGCACGGCTAT	27	True	NA	NA	False	NA	NA	NA	76311404	76216083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76311349
transcript_59408.known	chr15	-	1289	11	FSM	ENSG00000140374.17	ENST00000267950.12	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	321.806914158164	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGTTTATTTATT	-17	True	NA	-23	True	AAGAAA	-7	NA	76311448	76216249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76295590_76295738_76311349
transcript_59409.known	chr15	-	917	11	FSM	ENSG00000140374.17	ENST00000688389.1	2477	11	334	1226	-4	-24	multi-exon	FALSE	canonical	3	16	junction_4	316.374919992088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGAGATATTGAAGAAAAA	35	True	NA	NA	False	NA	NA	NA	76311396	76216582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_59412.known	chr15	-	942	10	FSM	ENSG00000140374.17	ENST00000560726.5	942	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	328.465117376767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCTACATTTCATA	26	False	76311492	-106	True	NA	NA	NA	76311466	76216467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76311349
transcript_59416.known	chr15	-	792	9	FSM	ENSG00000140374.17	ENST00000559602.5	792	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	350.164604150677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATTGGAAAGCATGGA	17	True	NA	-121	True	NA	NA	NA	76311414	76216482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76311349
transcript_59419.known	chr15	+	1831	6	FSM	ENSG00000159556.10	ENST00000290759.9	1831	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.01980390271856	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACGCCACTCCTCTGTGC	5	True	NA	4	True	AATAAA	-16	NA	76336772	76342475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76336942_76337777_76337968_76338251_76338515_76340275_76340560_76341133_76341302_76341718
transcript_5942.known	chr1	+	1132	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	88.7703376106353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	4	True	NA	19	True	NA	NA	NA	28553098	28577744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_59421.known	chr15	-	5033	32	FSM	ENSG00000140386.13	ENST00000563290.6	5033	32	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_24	5.82845294084655	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATGGTTCTGAATGAGTT	4	True	NA	NA	False	AATAAA	-17	NA	76905340	76347903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76348737_76351236_76351289_76353948_76354141_76376161_76376312_76381377_76381616_76404523_76404680_76434077_76434311_76471211_76471336_76504858_76504975_76574157_76574285_76621763_76621830_76665652_76665790_76701757_76701866_76702849_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771741_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811_76883877_76905298
transcript_59423.known	chr15	+	1750	8	FSM	ENSG00000117906.14	ENST00000320963.9	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	759.464258002754	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTCATTTTTGAGTG	-5	True	NA	-26	True	NA	NA	NA	76931737	76949860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76941636_76941691_76943757_76943872_76947420_76947518_76948409_76948553_76949069
transcript_59428.known	chr15	+	6218	7	FSM	ENSG00000117906.14	ENST00000394885.8	6218	7	0	0	0	0	multi-exon	FALSE	canonical	3	1548	junction_4	106.020045274467	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGCCTGCTATAAAAT	6	True	NA	NA	False	AATAAA	-13	NA	76931748	76954393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76943757_76943872_76947420_76947518_76948409_76948553_76949069
transcript_59436.known	chr15	+	1052	10	FSM	ENSG00000140368.13	ENST00000557995.1	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	4.5242829047783	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTGCGTTCTGTTCTCC	NA	False	NA	-6	True	NA	NA	NA	77028342	77037313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77028424_77028553_77028653_77029528_77029575_77030501_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
transcript_59444.known	chr15	-	6348	7	FSM	ENSG00000140391.15	ENST00000267970.9	6348	7	0	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_5	92.9272415507004	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	22	True	NA	NA	False	NA	NA	NA	77071109	77041403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77070891
transcript_59445.known	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	592.531480645168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	9	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
transcript_59447.known	chr15	+	4112	11	FSM	ENSG00000140382.15	ENST00000381714.7	4112	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	132.888863340763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	859	False	NA	16	True	ATTAAA	-17	NA	77420673	77485603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77421005_77447718_77447812_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_59448.known	chr15	+	3805	10	FSM	ENSG00000140382.15	ENST00000336216.9	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	42.2479453806796	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	-17	True	NA	16	True	ATTAAA	-17	NA	77420887	77485603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_59452.nic	chr15	+	1882	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-428	5999	48	0	5prime_fragment	FALSE	canonical	3	267	junction_6	38.6795730974374	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	645	False	NA	14	True	AATAAA	-16	NA	77420459	77479604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_59457.nic	chr15	+	2921	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-428	4960	48	1039	5prime_fragment	FALSE	canonical	3	267	junction_6	38.6795730974374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTCAATAAGCAAAAAAGA	645	False	NA	NA	False	AATAAA	-10	NA	77420459	77480643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_59459.known	chr15	+	747	3	FSM	ENSG00000140382.15	ENST00000560986.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCTGGGCAGTCATG	30	False	NA	NA	False	NA	NA	NA	77420934	77464823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77421005_77458403_77458497_77464239
transcript_5946.known	chr1	+	1799	9	FSM	ENSG00000180098.9	ENST00000373830.4	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	12.2346843032422	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTCTTCTT	-10	True	NA	14	True	AATATA	-7	NA	28553084	28578545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_59460.known	chr15	-	3477	2	FSM	ENSG00000169783.13	ENST00000355300.7	3477	2	0	0	0	0	multi-exon	TRUE	canonical	3	407	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGACTGTTCTCATTAT	-4	True	NA	-15	True	NA	NA	NA	77632912	77613026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_77615901_77632309
transcript_59462.known	chr15	-	576	2	FSM	ENSG00000167202.12	ENST00000491479.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAAAGGGTGAAAGTGCA	NA	False	NA	NA	False	NA	NA	NA	78001954	77998115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_77998356_78001618
transcript_59466.known	chr15	-	6215	14	FSM	ENSG00000103740.10	ENST00000258873.9	6215	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	3.93437287770598	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTTCAAGTGCATT	-22	True	NA	NA	False	AAAAAG	-15	NA	78234565	78167467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78171530_78173592_78173840_78174384_78174525_78178613_78178832_78179549_78179781_78180754_78180937_78181968_78182146_78182465_78182616_78182704_78182786_78193505_78193627_78193931_78194021_78194505_78194727_78208001_78208103_78234370
transcript_59467.known	chr15	+	2110	12	FSM	ENSG00000166411.14	ENST00000560667.5	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	95.0964712435493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTCCAAGAGCTTTTA	-11	True	NA	NA	False	NA	NA	NA	78149359	78169715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78149431_78155212_78155276_78156907_78157163_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_59468.nnic	chr15	+	2677	11	NIC	ENSG00000166411.14	novel	4083	11	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	73.4458303785858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTGCTTTCTCTACCT	NA	False	NA	28	True	AATAAA	-16	NA	78149340	78170542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_78149431_78155212_78155252_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_59469.known	chr15	+	4083	11	FSM	ENSG00000166411.14	ENST00000299518.7	4083	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	17.5968747225182	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTAGGTTTCTGTCTTG	-9	True	NA	NA	False	AATAAA	-21	NA	78149361	78171945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_59479.known	chr15	-	1499	6	FSM	ENSG00000136425.14	ENST00000258930.8	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	65.3923542931435	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTCTGATCCTTGA	-2	True	NA	17	True	NA	NA	NA	78131445	78104605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
transcript_59485.known	chr15	-	1511	5	FSM	ENSG00000136425.14	ENST00000539011.5	1511	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	160.875728436579	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTCCATGTATGCTA	-6	True	NA	-26	True	AGTAAA	-16	NA	78131535	78104648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78131164
transcript_59486.known	chr15	-	535	5	FSM	ENSG00000136425.14	ENST00000557917.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	190.054432992235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCACCATCCTGCCCT	285	False	NA	NA	False	NA	NA	NA	78131271	78105283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78123704_78123740_78131164
transcript_59489.nic	chr15	-	1886	5	NIC	ENSG00000136425.14	novel	1499	6	NA	NA	-24	0	intron_retention	FALSE	canonical	3	305	junction_3	61.8278861032787	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTCCATGTATGCTA	87	False	NA	-26	True	AGTAAA	-16	NA	78131469	78104648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
transcript_59494.known	chr15	-	934	4	FSM	ENSG00000136425.14	ENST00000557846.5	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	201.787567065521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAGGGAAAAGCAGATA	123	False	NA	NA	False	NA	NA	NA	78131433	78105011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78131164
transcript_59495.nnic	chr15	-	1373	4	NIC	ENSG00000136425.14	novel	1511	5	NA	NA	51	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	214.985270813297	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTCCATGTATGCTA	-3	True	NA	-26	True	AGTAAA	-16	NA	78131382	78104648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_78105333_78105738_78105935_78109234_78109510_78131164
transcript_59497.known	chr15	-	804	4	FSM	ENSG00000136425.14	ENST00000560618.5	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	165.346773647252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCCCAGTGTTGATTA	293	False	NA	NA	False	NA	NA	NA	78131263	78105489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105935_78109234_78109383_78111164_78111277_78131164
transcript_59500.known	chr15	+	559	2	FSM	ENSG00000166411.14	ENST00000560414.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTTATATAGGCTTTG	21	False	NA	NA	False	NA	NA	NA	78149391	78155732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78149431_78155212
transcript_59505.nnic	chr15	-	1212	11	NNC	ENSG00000140395.9	novel	1202	11	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	220.935194118094	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	6848	False	NA	-6	True	CATAAA	-17	NA	78299670	78283234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290049_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_59507.known	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_10	64.7580882979107	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-3	True	NA	-6	True	CATAAA	-17	NA	78299609	78283234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_59508.known	chr15	-	1266	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	214.57607042725	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	1	True	NA	-6	True	CATAAA	-17	NA	78299605	78283234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
transcript_59514.known	chr15	+	2961	8	FSM	ENSG00000140403.13	ENST00000343789.7	2961	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.76380914300945	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	42	True	NA	13	True	ATTAAA	-23	NA	78264561	78282196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_59516.known	chr15	+	738	4	FSM	ENSG00000166426.8	ENST00000299529.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	2742	junction_3	88.6052418815551	928	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCCCTTTTTTGGTTT	1	True	NA	30	True	ATTAAA	-20	NA	78340352	78348225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78340499_78341042_78341222_78343498_78343613_78347926
transcript_59523.known	chr15	+	6324	22	FSM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	21.0416927661992	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTCTTGTTCTGTTTT	-19	True	NA	16	True	AATAAA	-19	NA	78438215	78501453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_59531.known	chr15	+	847	5	FSM	ENSG00000188266.14	ENST00000408962.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1.4790199457749	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGCCAGGTCCTG	-10	True	NA	9	True	AATAAA	-20	NA	78507563	78537372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78507672_78513083_78513426_78514967_78515108_78527379_78527564_78537299
transcript_59532.known	chr15	+	4378	9	FSM	ENSG00000041357.16	ENST00000044462.12	4378	9	0	0	0	0	multi-exon	FALSE	canonical	3	3263	junction_8	245.027932081222	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTACTCCTGTGTATAA	4	True	NA	NA	False	AATAAA	-14	NA	78540443	78552417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_59535.known	chr15	+	944	9	FSM	ENSG00000041357.16	ENST00000560217.5	944	9	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	1208.75250129007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTGGGAAAATAGGACA	NA	False	NA	NA	False	NA	NA	NA	78540404	78549037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542575_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_59537.known	chr15	+	1094	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1238.37562455824	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGAAGGAATAAATT	-19	True	NA	10	True	AATAAA	-11	NA	78540420	78549186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_5954.known	chr1	-	524	6	FSM	ENSG00000197989.15	ENST00000475441.6	524	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	27.0333127825651	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	246	False	NA	NA	False	AATAAA	-27	NA	28581623	28578538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581093_28581230_28581589
transcript_59541.known	chr15	+	786	9	FSM	ENSG00000041357.16	ENST00000559365.5	786	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1254.26990092842	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGTAATCAGAGTTC	-1	True	NA	NA	False	NA	NA	NA	78540734	78548820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540836_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_59542.known	chr15	+	773	8	FSM	ENSG00000041357.16	ENST00000558281.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	1316.00910300183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCATTTCAGTGTAAAA	38	False	NA	NA	False	GATAAA	-30	NA	78540477	78548970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78548789
transcript_59547.known	chr15	+	1019	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1337.87682847236	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	-13	True	NA	28	True	AATAAA	-29	NA	78540426	78549204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_59550.known	chr15	+	2596	6	FSM	ENSG00000041357.16	ENST00000560099.5	2596	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	1528.97154976801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	21	True	NA	28	True	AATAAA	-29	NA	78540460	78549204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_59551.known	chr15	+	635	8	FSM	ENSG00000041357.16	ENST00000557929.5	635	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1346.89796289436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAATGACCTTGAAGTC	27	False	NA	NA	False	TATAAA	-4	NA	78540466	78546610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546578
transcript_59557.nnic	chr15	+	1424	6	NNC	ENSG00000169684.13	novel	3623	6	NA	NA	-35	32	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	58.4410814410548	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGAATTCCAGTTGT	NA	False	NA	25	True	AGTAAA	-17	NA	78565484	78593567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590105_78593091
transcript_59559.nnic	chr15	+	1979	6	NNC	ENSG00000169684.13	novel	3623	6	NA	NA	-35	421	intron_retention	FALSE	canonical	3	27	junction_5	58.4410814410548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCCTTTAAGGCTTACT	NA	False	NA	17	True	AATAAA	-18	NA	78565484	78594122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590105_78593091
transcript_5956.known	chr1	-	682	6	FSM	ENSG00000197989.15	ENST00000483436.5	682	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	33.807691432572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATATTTGTGTTTG	51	False	NA	NA	False	AATAAA	-20	NA	28581818	28578545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581093_28581230_28581589
transcript_59560.known	chr15	+	3623	6	FSM	ENSG00000169684.13	ENST00000299565.9	3623	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	58.4410814410548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTGACTTATTGA	2	True	NA	NA	False	TATAAA	-13	NA	78565519	78595269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590637_78593091
transcript_59564.known	chr15	-	3015	6	FSM	ENSG00000080644.16	ENST00000326828.6	3015	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.27636238330917	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCTGTGACTCATGTTT	-11	True	NA	-1	True	AATAAA	-16	NA	78620996	78595308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78596733_78601252_78602265_78617023_78617134_78618616_78618662_78618775_78618916_78620712
transcript_59566.nic	chr15	+	1095	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-86	3284	-35	-3023	5prime_fragment	FALSE	canonical	3	138	junction_4	20.8026440627147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTTGTGTCTTTGACTG	NA	False	NA	19	True	AATGAA	-27	NA	78565484	78590251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
transcript_59568.nic	chr15	+	2235	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-86	2144	-35	-1883	5prime_fragment	FALSE	canonical	3	138	junction_4	20.8026440627147	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTTAAAGAATGAGCC	NA	False	NA	NA	False	NA	NA	NA	78565484	78591391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
transcript_59569.nic	chr15	+	2470	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-86	1909	-35	-1648	5prime_fragment	FALSE	canonical	3	138	junction_4	20.8026440627147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACATTTGATGTATATAT	NA	False	NA	19	True	AATAAA	-31	NA	78565484	78591626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
transcript_59576.known	chr15	-	2596	6	FSM	ENSG00000117971.12	ENST00000261751.8	2596	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	2.56124969497314	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGCTCCTACCCCTCC	0	True	NA	NA	False	AATAAA	-16	NA	78641210	78624110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78625292_78628966_78629946_78631075_78631186_78631287_78631333_78635438_78635588_78641078
transcript_5959.known	chr1	-	1104	5	FSM	ENSG00000197989.15	ENST00000470977.6	1104	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	30.1413337462031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-9	True	NA	NA	False	AATAAA	-28	NA	28581878	28578537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581093_28581230_28581589
transcript_59594.known	chr15	-	5520	24	FSM	ENSG00000136378.15	ENST00000388820.5	5520	24	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_17	28.1134617163849	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCGTGACTTCGTCTT	18	False	78811482	-10	True	CATAAA	-21	NA	78811464	78759205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78759579_78762402_78762566_78763698_78763846_78763925_78764100_78764554_78764708_78765644_78767052_78767378_78767593_78768132_78768260_78771161_78771304_78771584_78771830_78773082_78773204_78774166_78774301_78774623_78774794_78776187_78776334_78776748_78776842_78777443_78777589_78788230_78788375_78789688_78789839_78790669_78790795_78791139_78791224_78796589_78796787_78797947_78798114_78800191_78800548_78811120
transcript_5961.known	chr1	-	1800	4	FSM	ENSG00000197989.15	ENST00000481368.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	21.9544984001001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-4	True	NA	NA	False	AATAAA	-28	NA	28581873	28578537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28579588_28579911_28581230_28581589
transcript_59613.known	chr15	+	2359	13	FSM	ENSG00000185787.15	ENST00000331268.9	2359	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	2950.83075402316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAACGTTTCTCCCCTTT	-29	True	NA	NA	False	ATTAAA	-20	NA	78872813	78898133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78884966_78885084_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_59622.known	chr15	+	2172	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	0	0	0	0	multi-exon	FALSE	canonical	3	6761	junction_6	612.367739135468	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	1	True	NA	NA	False	ATTAAA	-26	NA	78872889	78898139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_59633.known	chr15	+	1468	12	FSM	ENSG00000185787.15	ENST00000559345.5	1468	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	2326.4949872329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGTTAATGCTATAT	6	True	NA	NA	False	NA	NA	NA	78873004	78897389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873219_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_5964.known	chr1	-	1644	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	23.8932812499432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	12	False	NA	NA	False	AATAAA	-28	NA	28581857	28578537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
transcript_5965.nic	chr1	-	2121	3	NIC	ENSG00000197989.15	novel	1800	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_2	24	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTTGTGTTTGTATTT	-4	True	NA	NA	False	AATAAA	-25	NA	28581873	28578540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_28578681_28579532_28581230_28581589
transcript_59654.known	chr15	+	855	10	FSM	ENSG00000185787.15	ENST00000558502.5	855	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2530.31843016342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACTTATGTTTGGATC	31	False	NA	NA	False	NA	NA	NA	78873029	78897077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_5966.known	chr1	+	450	2	FSM	ENSG00000180098.9	ENST00000411406.3	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGGCAG	2	True	NA	NA	False	AATACA	-5	NA	28553096	28554048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28553138_28553639
transcript_59669.known	chr15	+	448	5	FSM	ENSG00000185787.15	ENST00000559619.5	448	5	0	0	0	0	multi-exon	FALSE	canonical	3	7759	junction_3	310.581209186905	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTGGAACCAGTAA	-12	True	NA	NA	False	NA	NA	NA	78872986	78887443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268
transcript_5967.known	chr1	-	1359	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	194.431067476368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACAGGGTACCTTTG	5265	False	NA	-8	True	AATAAA	-13	NA	28643005	28603100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
transcript_59674.known	chr15	-	1540	13	FSM	ENSG00000103811.18	ENST00000677316.1	1540	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	64.6307890164501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-30	True	NA	-29	True	AATAAA	-24	NA	78945058	78921768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537_78944632_78944890
transcript_59675.known	chr15	-	1783	12	FSM	ENSG00000103811.18	ENST00000677448.1	1783	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_11	50.0517087991909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGATGGAGCATGCTGG	-21	True	NA	-36	True	AATAAA	-17	NA	78945049	78921775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537
transcript_59676.known	chr15	-	2145	12	FSM	ENSG00000103811.18	ENST00000220166.10	2145	12	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	13.3199657508308	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGTAACATAAGACCAC	-18	True	NA	NA	False	AATATA	-19	NA	78945046	78921057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_59677.known	chr15	-	1503	12	FSM	ENSG00000103811.18	ENST00000676808.1	1503	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	50.7829606355231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-14	True	NA	-29	True	AATAAA	-24	NA	78945042	78921768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937497_78939139_78939172_78944890
transcript_59678.known	chr15	-	1903	12	FSM	ENSG00000103811.18	ENST00000676865.1	1903	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	50.2348204941816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGAGCACCTCCCCAG	24	True	NA	-50	True	AATAAA	-3	NA	78945004	78921789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78932039_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_59679.known	chr15	-	3693	11	FSM	ENSG00000103811.18	ENST00000527715.6	3693	11	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	13.9125842315509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGGTCCTGGGCCAT	-1	True	NA	-25	True	AATAAA	-28	NA	78945029	78921764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_5968.known	chr1	-	1335	6	FSM	ENSG00000120656.14	ENST00000373824.9	1335	6	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_2	35.5718990215591	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTTATATGCCTAAAAA	-12	True	NA	NA	False	NA	NA	NA	28643067	28602849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642991
transcript_59680.known	chr15	-	1386	12	FSM	ENSG00000103811.18	ENST00000525807.6	1386	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	51.1634877558092	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCATGCTGGTCCTG	23	True	NA	-31	True	AATAAA	-22	NA	78945005	78921770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939167_78944890
transcript_59683.known	chr15	+	1418	3	FSM	ENSG00000166557.14	ENST00000299705.10	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	22	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGTGCCTTTAT	3	True	NA	17	True	AATAAA	-18	NA	79311111	79322840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_79311418_79313756_79314006_79321977
transcript_59685.known	chr15	-	859	4	FSM	ENSG00000259332.3	ENST00000479961.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	344.907072831058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATAATCAGTGTTTTA	-32	True	NA	NA	False	NA	NA	NA	79923744	79845194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79845443_79889092_79889355_79907628_79907685_79923451
transcript_59691.nic	chr15	-	1016	3	NIC	ENSG00000136371.11	novel	948	3	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	302.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	3073	False	NA	-1	True	ATTAAA	-34	NA	79897077	79844975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_59692.known	chr15	-	2301	3	FSM	ENSG00000136371.11	ENST00000258874.4	2301	3	0	0	0	0	multi-exon	TRUE	canonical	3	595	junction_2	124.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTGAATATGGGTTTG	-9	True	NA	NA	False	AGTAAA	-16	NA	79897014	79843546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79845443_79889092_79889355_79896871
transcript_59693.nic	chr15	-	952	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	-63	-64	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	302.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGTGTGAATAGTAGAA	3073	False	NA	-65	True	TATAAA	-19	NA	79897077	79845039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_59695.known	chr15	-	948	3	FSM	ENSG00000136371.11	ENST00000559722.2	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	2771	False	NA	-1	True	ATTAAA	-34	NA	79897379	79844975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79845443_79889092_79889355_79897160
transcript_59696.known	chr15	-	632	3	FSM	ENSG00000259332.3	ENST00000494999.1	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	408.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTACTATGATGCCT	-42	True	NA	NA	False	NA	NA	NA	79923754	79845375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79845443_79889092_79889355_79923451
transcript_59698.nnic	chr15	-	971	3	Fusion	ENSG00000180953.11_ENSG00000288604.1	novel	1004	3	NA	NA	-76	0	multi-exon	FALSE	canonical	3	27	junction_2	205.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATATGCCATTTTTGTC	-66	True	NA	-9	True	AATAAA	-15	NA	79923778	79898846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr15_-_79899126_79907628_79907685_79923142
transcript_59699.known	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	87	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	10	True	NA	-28	True	AATAAA	-23	NA	79923702	79898903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79899126_79907628_79907685_79923451
transcript_59701.nnic	chr15	-	678	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	189	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATATGCCATTTTTGTC	-60	True	NA	-9	True	AATAAA	-15	NA	79923772	79898846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_59705.nnic	chr15	-	621	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	189	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-60	True	NA	-28	True	AATAAA	-23	NA	79923772	79898903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_59706.known	chr15	+	4223	1	FSM	ENSG00000259642.2	ENST00000560255.2	4223	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTGGGTCCACACTGC	165	False	NA	NA	False	AATAAA	-15	NA	79922770	79926993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_79922800_79927000
transcript_5971.known	chr1	+	1950	2	FSM	ENSG00000188060.8	ENST00000373826.3	1950	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATCTCAGAATCTGCC	NA	False	NA	4	True	AATAAA	-15	NA	28592199	28595443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28592400_28593693
transcript_59711.known	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.156085973588	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	-3	True	NA	25	True	AATAAA	-27	NA	80059675	80138393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_59719.known	chr15	+	1602	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	869.317820030294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	14	False	NA	-10	True	NA	NA	NA	80072582	80138358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_5972.known	chr1	+	2236	2	FSM	ENSG00000188060.8	ENST00000465518.3	2236	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAATCTGCCTCCTGG	0	True	NA	10	True	AATAAA	-21	NA	28592264	28595449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28592745_28593693
transcript_59721.known	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	255.987812209878	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	35	True	NA	-8	True	NA	NA	NA	80059713	80138360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_59725.known	chr15	+	1446	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	800.491099263446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	9	True	NA	-8	True	NA	NA	NA	80072577	80138360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_59726.nic	chr15	+	577	5	ISM	ENSG00000086666.19	ENST00000561060.5	891	6	63	6437	0	0	5prime_fragment	FALSE	canonical	3	1533	junction_1	285.980222218251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAAGAATCGCTG	-3	True	NA	12	True	NA	NA	NA	80059675	80131241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179
transcript_59728.known	chr15	+	780	5	FSM	ENSG00000086666.19	ENST00000558688.5	780	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	876.916472647196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATTAGACAAATAAGGT	18	False	NA	NA	False	AAAAAG	-22	NA	80072586	80131517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179
transcript_59731.known	chr15	+	582	5	FSM	ENSG00000086666.19	ENST00000564367.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	883.821390327254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGATGCTGCTGAGAAAATC	11	True	NA	NA	False	NA	NA	NA	80059689	80137560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80137479
transcript_59732.known	chr15	+	1471	15	FSM	ENSG00000103876.14	ENST00000261755.9	1471	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	31.1805963996318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	-6	True	NA	13	True	AATAAA	-26	NA	80152793	80186343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80152842_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_59733.known	chr15	+	2152	15	FSM	ENSG00000103876.14	ENST00000407106.5	2152	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	27.4818121673226	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTGCATGTCCAGTGT	-20	True	NA	NA	False	AATACA	-18	NA	80152779	80186946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80152906_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_59735.known	chr15	+	1456	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.3828469211889	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTGTGTCCACTTA	-9	True	NA	19	True	AATAAA	-32	NA	80152998	80186349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_59743.known	chr15	+	2124	5	FSM	ENSG00000103876.14	ENST00000558767.6	2124	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	11.5108644332213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAATGCTCACTTTCAT	-6	True	NA	NA	False	ATTAAA	-19	NA	80152793	80163744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245
transcript_59744.nnic	chr15	-	1198	6	NNC	ENSG00000259495.3	novel	998	5	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	10.1113797278116	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCATCTTGCAACTTG	682	False	NA	-23	True	AATAAA	-9	NA	80404278	80344868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_80345128_80347698_80347785_80362374_80362511_80397943_80398007_80403501_80403586_80403708
transcript_59746.known	chr15	-	998	5	FSM	ENSG00000259495.3	ENST00000656160.1	998	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	8.04285397107271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCATCTTGCAACTTG	746	False	NA	-23	True	AATAAA	-9	NA	80404214	80344868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_80345128_80347698_80347785_80397943_80398007_80403501_80403586_80403708
transcript_5975.known	chr1	+	1912	10	FSM	ENSG00000162419.13	ENST00000294409.2	1912	10	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	12.4731811064211	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	1	True	NA	-75	True	NA	NA	NA	28668779	28714873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_59750.known	chr15	+	6523	19	FSM	ENSG00000172379.22	ENST00000303329.9	6523	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	9.49593805298733	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGCCCAGGCCAAGTT	-5	True	NA	10	True	AATAAA	-21	NA	80404381	80597933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80404547_80450879_80450995_80457928_80457977_80470217_80470432_80475009_80475224_80508155_80508259_80513910_80513977_80514319_80514406_80551198_80551276_80552639_80552775_80555064_80555140_80563087_80563240_80574147_80574221_80574986_80575111_80576865_80576966_80580410_80580550_80581238_80581405_80591567_80591705_80593599
transcript_59754.known	chr15	-	1392	3	FSM	ENSG00000117899.11	ENST00000422879.3	1392	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTCCAAAATGATTTCAG	1	True	NA	NA	False	TTTAAA	-7	NA	80989819	80948085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_80948899_80951958_80952297_80989578
transcript_59755.known	chr15	-	4200	3	FSM	ENSG00000117899.11	ENST00000261758.6	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	31	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACCTGTATCAGAT	1	True	NA	-5	True	AATAAA	-27	NA	80989819	80975751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_80979478_80981949_80982183_80989578
transcript_59761.nnic	chr15	+	2990	2	Genic_Genomic	ENSG00000140406.4	novel	4866	1	NA	NA	0	-1789	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGGCTTTTTGCAATT	-16	True	NA	2	True	ATTAAA	-13	NA	81000922	81003999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr15_+_81002608_81002694
transcript_59762.known	chr15	-	4887	6	FSM	ENSG00000172345.14	ENST00000302824.7	4887	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	4.01995024844836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCATTAAGCTCTCTT	-2	True	NA	0	True	AATAAA	-25	NA	81324141	81309052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81322898_81322949_81324000
transcript_59763.known	chr15	-	1264	5	FSM	ENSG00000172345.14	ENST00000325346.6	1264	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.39509972887452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCAATGTGTCTTCCA	-12	True	NA	-7	True	TTTAAA	-25	NA	81324183	81312667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81324000
transcript_59770.known	chr15	-	3405	2	FSM	ENSG00000183496.6	ENST00000329713.5	3405	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTGGTGACTTTTTT	1	True	NA	57	True	AATAAA	-19	NA	82046018	82041777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82044614_82045449
transcript_59773.known	chr15	-	3643	20	FSM	ENSG00000140598.15	ENST00000268206.12	3643	20	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_11	29.4355015833365	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATGTTAGAGAACATGT	-33	True	NA	-16	True	AATAAA	-25	NA	82262734	82130232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_59775.known	chr15	-	3470	18	FSM	ENSG00000140598.15	ENST00000359445.7	3470	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	71.3625666365428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATGTTAGAGAACATGT	-13	True	NA	-16	True	AATAAA	-25	NA	82262714	82130232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82261687_82261798_82262613
transcript_59780.known	chr15	+	262	2	FSM	ENSG00000188659.10	ENST00000565006.1	262	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	279	False	NA	8	True	AATAAA	-19	NA	82263143	82264889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82263189_82264672
transcript_59781.known	chr15	+	3304	4	FSM	ENSG00000188659.10	ENST00000682753.1	3304	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTTTACCTAATTTT	12	True	NA	NA	False	AATAAA	-30	NA	82262817	82284927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82262933_82265568_82265749_82271602_82271803_82282118
transcript_59782.known	chr15	+	445	4	FSM	ENSG00000188659.10	ENST00000562097.5	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTCCTTATGTAGC	21	True	NA	0	True	AATAAA	-11	NA	82262826	82264881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82262933_82263138_82263189_82263358_82263439_82264672
transcript_5979.known	chr1	+	6358	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.7284080571728	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	5	True	NA	18	True	AATAAA	-22	NA	28668783	28719353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_59794.known	chr15	+	648	5	FSM	ENSG00000259429.5	ENST00000618775.4	648	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	11.6404467268228	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGATGTTAGAGGTCT	14	False	NA	NA	False	NA	NA	NA	82355141	82414738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82355375_82400659_82400717_82404611_82404752_82408287_82408368_82414600
transcript_59804.known	chr15	-	918	8	FSM	ENSG00000255769.7	ENST00000614347.4	918	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	38.3064975572296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGGACTTGGAAGTGGG	126	False	NA	NA	False	NA	NA	NA	82513844	82473419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82473451_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513715
transcript_59806.nic	chr15	-	3417	8	NIC	ENSG00000255769.7	novel	983	7	NA	NA	-42	1511	intron_retention	FALSE	canonical	3	38	junction_1	24.7930207427619	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513992	82471481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473814_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_59811.nic	chr15	-	3083	8	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-42	1509	intron_retention	FALSE	canonical	3	52	junction_2	19.7080735554063	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGAGCTTCAGTTTTCT	NA	False	NA	NA	False	AATACA	-12	NA	82513992	82471483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_59821.nic	chr15	-	2957	8	NIC	ENSG00000255769.7	novel	983	7	NA	NA	-42	1051	intron_retention	FALSE	canonical	3	38	junction_1	24.7930207427619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	-9	True	NA	NA	NA	82513992	82471941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473814_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_59826.nic	chr15	-	2620	8	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-42	1046	intron_retention	FALSE	canonical	3	52	junction_2	19.7080735554063	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACACCTGTCTACTCAG	NA	False	NA	-14	True	NA	NA	NA	82513992	82471946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_59839.known	chr15	-	983	7	FSM	ENSG00000255769.7	ENST00000618267.4	983	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	33.8119801253934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCAGAGTGAATGTTCT	20	False	NA	NA	False	NA	NA	NA	82513950	82473784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82473814_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82513665
transcript_59842.nic	chr15	-	3321	7	NIC	ENSG00000255769.7	novel	1349	7	NA	NA	-42	1511	intron_retention	TRUE	canonical	3	19	junction_4	28.765816905178	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513992	82471481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473814_82475477_82475616_82476785_82476941_82477032_82477124_82477393_82477583_82477837_82477927_82513665
transcript_59844.nic	chr15	-	4587	7	NIC	ENSG00000255769.7	novel	983	7	NA	NA	-42	1511	intron_retention	FALSE	canonical	3	38	junction_1	24.8103920879045	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513992	82471481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473814_82475477_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_59848.nic	chr15	-	2987	7	NIC	ENSG00000255769.7	novel	1349	7	NA	NA	-42	1509	intron_retention	FALSE	canonical	3	19	junction_4	27.0580651357204	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGAGCTTCAGTTTTCT	NA	False	NA	NA	False	AATACA	-12	NA	82513992	82471483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477393_82477583_82477837_82477927_82513665
transcript_59851.known	chr15	-	1349	7	FSM	ENSG00000255769.7	ENST00000618004.4	1349	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	32.9262644235402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGCCTGTCCAGCGGCCT	20	False	NA	NA	False	NA	NA	NA	82513950	82472992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477480_82477583_82477837_82477927_82513665
transcript_59857.nic	chr15	-	4253	7	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-42	1509	intron_retention	FALSE	canonical	3	56	junction_3	16.9705627484771	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGAGCTTCAGTTTTCT	NA	False	NA	NA	False	AATACA	-12	NA	82513992	82471483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_59869.nic	chr15	-	2521	7	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1046	intron_retention	FALSE	canonical	3	13	junction_6	32.6721934100272	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACACCTGTCTACTCAG	NA	False	NA	-14	True	NA	NA	NA	82513982	82471946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82513665
transcript_5987.known	chr1	+	2063	9	FSM	ENSG00000162419.13	ENST00000480454.1	2063	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	10.7819293264239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATTTCCAGGCTCGT	NA	False	NA	117	True	NA	NA	NA	28683563	28715065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_59924.known	chr15	-	2112	12	FSM	ENSG00000214575.10	ENST00000615198.4	2112	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.74199862463242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTGTCCAGAAGGTATT	802	False	NA	NA	False	NA	NA	NA	82647977	82544272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343_82571533_82627192_82627368_82647855
transcript_59925.nic	chr15	-	2209	12	NIC	ENSG00000214575.10	novel	2112	12	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	6.74199862463242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTGTCCAGAAGGTATT	-7	True	NA	NA	False	NA	NA	NA	82648059	82544272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553451_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343_82571533_82627192_82627368_82647855
transcript_59931.known	chr15	-	2459	11	FSM	ENSG00000214575.10	ENST00000618449.4	2459	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.41014820421494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAATTTTTTGTT	-9	True	NA	NA	False	NA	NA	NA	82571823	82543833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553451_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343_82571533_82571633
transcript_59933.known	chr15	-	1919	11	FSM	ENSG00000214575.10	ENST00000611163.4	1919	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.41014820421494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	14	True	NA	NA	False	NA	NA	NA	82571759	82544294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343_82571533_82571633
transcript_59935.known	chr15	-	2068	10	FSM	ENSG00000214575.10	ENST00000617462.4	2068	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.80058475033046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	82571809	82544296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343
transcript_59938.known	chr15	-	488	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_4	1585.89036506311	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCATCTTTGCAGT	-2	True	NA	-16	True	AATAAA	-18	NA	82540457	82536749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_59939.known	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_3	1802.5173138327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-4	True	NA	-21	True	AATAAA	-13	NA	82540459	82536754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
transcript_5994.known	chr1	+	2825	6	FSM	ENSG00000198492.16	ENST00000542507.5	2825	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	484.091726845233	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTAGTACCATTTAGTA	1	True	NA	21	True	AATAAA	-22	NA	28736620	28769774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28736810_28737046_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_59942.known	chr15	-	2012	13	FSM	ENSG00000260836.2	ENST00000562833.2	2012	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	5225.28123844385	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTATTATTTTCAATAA	1457	False	NA	-54	True	NA	NA	NA	82571741	82536787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343
transcript_59943.known	chr15	-	3754	27	FSM	ENSG00000103723.17	ENST00000535359.6	3754	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	10.8873331752381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGCTCACCTTTCCT	-3	True	NA	-1	True	AATAAA	-15	NA	82709875	82659280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665246_82665304_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82709593
transcript_59944.known	chr15	-	3697	26	FSM	ENSG00000103723.17	ENST00000668990.2	3697	26	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_22	7.07627020399871	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGCTCACCTTTCCT	-3	True	NA	-1	True	AATAAA	-15	NA	82709875	82659280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82709593
transcript_59946.known	chr15	-	3254	25	FSM	ENSG00000103723.17	ENST00000535348.5	3254	25	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_22	8.78564169540279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTATACCTCCCCATGA	0	True	NA	NA	False	NA	NA	NA	82709779	82659531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82689157_82689233_82689377_82689454_82709593
transcript_59953.known	chr15	-	1919	14	FSM	ENSG00000103723.17	ENST00000666055.1	1919	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.986812966989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTACAATGAATCCAGAAAA	27	True	NA	NA	False	AATAAA	-9	NA	82709887	82676915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82677166_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82709593
transcript_59954.known	chr15	-	2425	13	FSM	ENSG00000103723.17	ENST00000664460.1	2425	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	9.68102382097174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTGTTTTTGTAATAA	-4	True	NA	-36	True	NA	NA	NA	82709843	82675741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82689157_82689233_82689377_82689454_82709593
transcript_59956.known	chr15	-	3395	4	FSM	ENSG00000103723.17	ENST00000535513.2	3395	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	-5	True	NA	NA	False	NA	NA	NA	82709919	82685913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82688832_82689157_82689233_82689377_82689454_82709593
transcript_59958.known	chr15	-	2650	18	FSM	ENSG00000103723.17	ENST00000660624.1	2650	18	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	6.75164980478884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGCTCACCTTTCC	60	False	NA	-2	True	AATAAA	-14	NA	82680407	82659281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
transcript_59960.known	chr15	+	790	4	FSM	ENSG00000250988.7	ENST00000561107.5	790	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	8.16496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	2	True	NA	NA	False	AATAAA	-17	NA	82750571	82757204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903
transcript_59964.known	chr15	+	725	3	FSM	ENSG00000250988.7	ENST00000558174.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	13	True	NA	NA	False	AATAAA	-19	NA	82750582	82757206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82750849_82754628_82754785_82756903
transcript_59968.known	chr15	-	1949	9	FSM	ENSG00000103942.13	ENST00000450735.7	1949	9	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	29.8577355973289	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-7	True	NA	-11	True	AATAAA	-17	NA	82952720	82848982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859136_82864166_82864260_82875272_82875405_82892684_82892842_82952530
transcript_59969.nic	chr15	-	2133	9	NIC	ENSG00000103942.13	novel	1949	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	60.8723048684704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	4	True	NA	-11	True	AATAAA	-17	NA	82986160	82848982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859136_82864166_82864260_82875272_82875405_82892684_82892842_82985786
transcript_59970.known	chr15	-	1990	9	FSM	ENSG00000103942.13	ENST00000304231.12	1990	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	49.6297226971902	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-15	True	NA	-11	True	AATAAA	-17	NA	82952728	82848982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859169_82864166_82864260_82875272_82875405_82892684_82892842_82952530
transcript_59976.known	chr15	+	1565	4	FSM	ENSG00000169612.4	ENST00000304191.4	1565	4	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	30.169889330626	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCAGTTAGCCCATT	-3	True	NA	37	True	AATAAA	-34	NA	82986209	82991057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82986370_82987335_82987385_82989009_82989189_82989880
transcript_5998.known	chr1	+	2744	5	FSM	ENSG00000198492.16	ENST00000373812.8	2744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	95.4761095772131	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	-11	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_59983.known	chr15	-	11274	4	FSM	ENSG00000169609.14	ENST00000304177.10	11274	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.0039122552804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTTATATAATTTTTCA	-31	True	NA	-7	True	AATAAA	-20	NA	83011639	82994816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83005693_83008547_83008676_83010236_83010364_83011496
transcript_59985.known	chr15	-	419	4	FSM	ENSG00000169609.14	ENST00000563387.5	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	60.8623218602628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCACAACGGTTCTG	6094	False	NA	-21	True	ATTAAA	-5	NA	83011543	83004866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011485
transcript_59989.known	chr15	-	559	2	FSM	ENSG00000169609.14	ENST00000565712.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCCTTGAGAAACTTTT	-33	True	NA	-28	True	AATAAA	-4	NA	83011641	83005278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83005693_83011496
transcript_59990.known	chr15	-	1881	3	FSM	ENSG00000169609.14	ENST00000505341.1	1881	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAATAAAAAAT	14	True	NA	-47	True	NA	NA	NA	83011594	83005297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83005693_83008547_83008676_83010236
transcript_59993.known	chr15	-	3194	8	FSM	ENSG00000064726.10	ENST00000261721.9	3194	8	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	54.3582222532214	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTATGTCATTTGCCT	-21	True	NA	NA	False	AATAAA	-26	NA	83067252	83016422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83018226_83018706_83018854_83020674_83020763_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
transcript_59997.known	chr15	-	1467	7	FSM	ENSG00000064726.10	ENST00000379403.2	1467	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	177.867928531256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAGAAACAGTTTCTT	-2	True	NA	NA	False	AAAAAG	-32	NA	83067151	83017960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83018226_83018706_83018854_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
transcript_6.known	ERCC-00016	+	834	1	FSM	ERCC-00016A	DQ883664	834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00016_+_0_800
transcript_60.known	ERCC-00170	+	1007	1	FSM	ERCC-00170A	DQ516773	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00170_+_0_1000
transcript_60003.known	chr15	+	1885	10	FSM	ENSG00000136404.16	ENST00000322019.14	1885	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.52659116242039	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTTAAAGAAAATTTGT	-9	True	NA	NA	False	ATTAAA	-30	NA	83107644	83137408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119682_83121920_83122004_83122756_83122879_83124671_83124777_83126754_83126848_83127357_83127478_83136480
transcript_60009.known	chr15	-	12538	6	FSM	ENSG00000166503.9	ENST00000299633.7	12538	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_5	34.6156034181119	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGTGTAACCTTGG	18	True	NA	NA	False	AATAAA	-15	NA	83207823	83127752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83207330
transcript_60020.known	chr15	+	1647	9	FSM	ENSG00000140600.17	ENST00000563901.5	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	44.9325883963967	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCTTGGTTATTTTT	2	True	NA	30	True	AATAAA	-20	NA	83447375	83618739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568535_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
transcript_60023.known	chr15	+	6873	30	FSM	ENSG00000156218.13	ENST00000567476.1	6873	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.41576274319131	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATGGGGGACAGTGAG	-5	True	NA	NA	False	NA	NA	NA	83654087	84039427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_83654277_83655728_83655831_83704388_83704509_83773522_83773651_83804649_83804696_83819810_83820048_83838088_83838216_83858765_83858841_83870801_83870960_83885100_83885213_83890108_83890248_83891328_83891380_83892683_83892889_83897857_83898006_83899646_83899732_83913091_83913379_83923903_83924034_83942595_83942789_83942902_83943083_83970483_83970638_83982272_83983345_83988690_83988819_83991085_83991215_84014541_84014725_84016382_84016500_84021409_84021594_84025237_84025437_84031334_84031433_84036772_84037005_84037762
transcript_60025.nic	chr15	-	3437	8	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	-22	465	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	28.4224688353049	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTTTTCTTATCTGA	NA	False	NA	-36	True	AATACA	-19	NA	84230158	84198845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84201209_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60027.nic	chr15	-	3100	8	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	-22	460	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	16.1321076725635	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	-41	True	AATACA	-14	NA	84230158	84198850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60037.nic	chr15	-	2972	8	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	28.4224688353049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84230158	84199310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84201209_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60038.nnic	chr15	-	3599	8	NNC	ENSG00000225151.10	novel	2850	7	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	33.0947927342422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84230158	84199310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_84201836_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60039.nic	chr15	-	2639	8	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	16.1321076725635	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTCTACTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	84230158	84199311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60041.known	chr15	-	2850	7	FSM	ENSG00000225151.10	ENST00000400817.7	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	37.2677996249965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	31	False	NA	NA	False	NA	NA	NA	84230125	84199310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84201209_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84229851
transcript_60048.nic	chr15	-	5091	7	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	-22	458	intron_retention	FALSE	canonical	3	81	junction_3	9.95685135416256	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGAGCTTCAGTTTTCT	NA	False	NA	-43	True	AATACA	-12	NA	84230158	84198852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60054.nic	chr15	-	4633	7	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	-22	0	intron_retention	FALSE	canonical	3	81	junction_3	9.95685135416256	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84230158	84199310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60056.nic	chr15	-	2484	7	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	28.2513519833811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTCTACTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	84230158	84199311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84200877_84202869_84203021_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_60060.known	chr15	-	962	6	FSM	ENSG00000225151.10	ENST00000559654.5	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	40.6920139585153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCCAGGCTCAGCCAT	6	True	NA	NA	False	NA	NA	NA	84230090	84202708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84203021_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229901
transcript_60079.nic	chr15	-	2000	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	38.9163766941374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	4291	False	NA	NA	False	NA	NA	NA	84654315	84642767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_6008.known	chr1	+	2719	4	FSM	ENSG00000198492.16	ENST00000541996.5	2719	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	593.048808184359	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	-11	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28737148_28738258_28738339_28742402_28743987_28768928
transcript_60081.nic	chr15	-	1686	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	38.9163766941374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	4291	False	NA	-35	True	AATAAA	-15	NA	84654315	84643081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_60086.known	chr15	-	1915	8	FSM	ENSG00000177082.13	ENST00000398528.7	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	28.6975786506138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	4263	False	NA	NA	False	NA	NA	NA	84654343	84642767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_60087.known	chr15	-	5331	8	FSM	ENSG00000177082.13	ENST00000434634.7	5331	8	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_7	23.2053829082471	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCATCTCCCTAAAATG	-1	True	NA	-14	True	AATAAA	-20	NA	84654283	84639284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_6009.nic	chr1	+	1940	4	NIC	ENSG00000198492.16	novel	358	3	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	550.75120416472	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAAGA	624	False	NA	NA	False	NA	NA	NA	28737718	28769125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_28737798_28738258_28738339_28742402_28743987_28768928
transcript_601.known	chr1	+	7394	39	FSM	ENSG00000188157.15	ENST00000620552.4	7394	39	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_35	69.4954312055746	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTTTGTCCATCCTCA	24	True	NA	31	True	AATAAA	-20	NA	1020122	1056118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1020374_1022200_1022463_1035276_1035325_1040664_1040881_1041172_1041398_1041477_1041703_1041955_1042163_1043238_1043458_1043537_1043733_1043822_1044024_1044108_1044258_1044333_1044440_1045160_1045278_1045358_1045524_1045732_1045877_1045963_1046089_1046159_1046266_1046396_1046736_1046819_1046958_1047326_1047455_1047572_1047688_1047775_1047896_1048011_1048366_1048866_1049060_1049235_1049452_1049565_1049796_1049902_1050038_1050232_1050330_1050426_1050592_1050725_1050838_1051031_1051044_1051252_1051370_1051452_1051646_1051727_1051816_1051992_1052017_1053460_1053494_1053752_1053978_1054447_1054552_1054823
transcript_60117.known	chr15	+	8975	4	FSM	ENSG00000176700.21	ENST00000348993.9	8975	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCTGAGTCTACTA	-15	True	NA	4	True	ATTAAA	-15	NA	84631450	84647478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84632299_84637346_84637421_84638395_84638478_84639507
transcript_60121.known	chr15	-	528	4	FSM	ENSG00000177082.13	ENST00000558019.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	42.6640624205223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGGAGTTGCTCCAGG	-1	True	NA	NA	False	NA	NA	NA	84654283	84648311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84648626_84652713_84652803_84653631_84653700_84654226
transcript_60124.known	chr15	+	993	3	FSM	ENSG00000176371.14	ENST00000334141.7	993	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	41.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	-3	True	NA	12	True	AATAAA	-25	NA	84601017	84606889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604334_84606528
transcript_60125.known	chr15	+	906	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	30.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	29	False	NA	13	True	AATAAA	-21	NA	84601049	84616614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604334_84616308
transcript_60127.known	chr15	+	3756	3	FSM	ENSG00000176371.14	ENST00000546148.6	3756	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	24.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	-12	True	NA	27	True	AATAAA	-17	NA	84601008	84623716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604334_84620601
transcript_60129.nic	chr15	+	1011	3	NIC	ENSG00000176371.14	novel	906	3	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	6.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	NA	False	NA	13	True	AATAAA	-21	NA	84600997	84616614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_84601189_84603819_84604334_84616308
transcript_60131.known	chr15	+	3813	3	FSM	ENSG00000176371.14	ENST00000448803.6	3813	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	0.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	-16	True	NA	27	True	AATAAA	-17	NA	84601004	84623716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601189_84603819_84604334_84620601
transcript_60133.known	chr15	+	2390	3	FSM	ENSG00000176371.14	ENST00000327179.6	2390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGGCCGAGTCCTCAGA	29	False	NA	-34	True	NA	NA	NA	84601049	84622394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604331_84620601
transcript_60134.known	chr15	-	2031	7	FSM	ENSG00000177082.13	ENST00000559126.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	13.6218778278017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	4360	False	NA	-35	True	AATAAA	-15	NA	84654246	84643081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631
transcript_60135.known	chr15	-	655	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	0.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTGGTCCTCTCCTT	1	True	NA	-4	True	AATAAA	-18	NA	84658199	84655131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84655410_84657175_84657349_84657995
transcript_60136.known	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	557.049194915095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-1	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_60137.known	chr15	-	1223	7	FSM	ENSG00000140612.14	ENST00000455959.7	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	551.047386548763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCACATTGAACCCC	7	True	NA	-28	True	AATAAA	-2	NA	84716163	84669559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84714730_84714867_84716024
transcript_60140.known	chr15	-	1079	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_3	28.4042250378355	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-2	True	NA	-12	True	AATAAA	-18	NA	84716139	84669543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_60144.known	chr15	-	1256	5	FSM	ENSG00000140612.14	ENST00000559729.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	523.305121320249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-28	True	NA	-6	True	AATAAA	-24	NA	84716460	84669537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84691534_84691645_84716024
transcript_60145.known	chr15	-	882	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	512.05590515099	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	0	True	NA	-13	True	AATAAA	-17	NA	84716063	84669544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
transcript_6015.known	chr1	+	2594	4	FSM	ENSG00000198492.16	ENST00000478283.5	2594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_2	44.5745318414999	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAAGA	-1	True	NA	NA	False	NA	NA	NA	28736949	28769125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28737683_28738258_28738339_28742402_28743987_28768928
transcript_60154.known	chr15	+	8187	11	FSM	ENSG00000166716.10	ENST00000560079.7	8187	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	28.6	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGTTGTTTTCATT	6	True	NA	23	True	ATTAAA	-32	NA	84748591	84806445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84748665_84764706_84764816_84778182_84778313_84782656_84784896_84790704_84790884_84797868_84798046_84798314_84798475_84798587_84798876_84799097_84799211_84799841_84799978_84801862
transcript_60159.known	chr15	+	4036	22	FSM	ENSG00000073417.15	ENST00000394553.6	4036	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	5.87666124532376	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTTATCATCTTTTT	-15	True	NA	NA	False	ATTAAA	-19	NA	84981855	85139142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84982349_85064369_85064427_85067013_85067205_85075861_85075919_85076732_85076788_85083555_85083645_85089337_85089417_85091043_85091182_85097947_85098037_85100014_85100067_85100155_85100199_85109052_85109131_85113376_85113448_85113872_85114038_85115438_85115488_85115983_85116120_85117640_85117840_85120796_85121015_85123060_85123194_85126206_85126375_85136533_85136664_85137796
transcript_6016.known	chr1	+	9317	3	FSM	ENSG00000116329.12	ENST00000234961.7	9317	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTGTTTTGTTTGC	2	True	NA	16	True	AATAAA	-26	NA	28812169	28871267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28812611_28858953_28859304_28862741
transcript_60161.nnic	chr15	-	3111	8	NNC	ENSG00000229212.8	novel	844	5	NA	NA	-1	1991	intron_retention	FALSE	canonical	3	27	junction_1	24.8061875098837	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	85234796	85203448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_85205475_85207467_85207619_85208774_85208930_85209024_85209116_85209198_85209291_85209385_85209575_85209829_85209919_85234478
transcript_6018.known	chr1	+	6031	21	FSM	ENSG00000159023.22	ENST00000343067.9	6031	21	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_14	96.2343363877987	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTGTGAGGATTGAT	19	True	NA	8	True	AATAAA	-16	NA	28914568	29120041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29058810_29058853_29060421_29060485_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
transcript_60180.nic	chr15	-	4639	7	NIC	ENSG00000229212.8	novel	2224	7	NA	NA	-1	1526	intron_retention	FALSE	canonical	3	78	junction_3	11.6535640709422	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACACCTGTCTACTCAG	NA	False	NA	NA	False	NA	NA	NA	85234796	85203913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_85207619_85208774_85208930_85209024_85209116_85209198_85209291_85209385_85209575_85209829_85209919_85234478
transcript_60190.nic	chr15	+	5538	16	ISM	ENSG00000170776.22	ENST00000394518.7	13327	37	-41	64481	-9	0	5prime_fragment	FALSE	canonical	3	12	junction_12	11.5231168623	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATCACTGTGGGCATT	NA	False	NA	14	True	AATAAA	-26	NA	85380561	85684874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583_85533881_85543771_85543956_85575130_85575330_85578929_85582108_85585701_85585824_85639373_85639450_85645817_85645955_85655416_85655788_85658536_85658591_85664562_85664756_85669721_85669831_85682157_85682213_85684740
transcript_60191.known	chr15	+	5459	15	FSM	ENSG00000170776.22	ENST00000559362.5	5459	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	7.2678352053021	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATCACTGTGGGCATT	-3	True	NA	14	True	AATAAA	-26	NA	85380586	85684874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583_85533881_85543771_85543956_85575130_85575330_85578929_85582108_85585701_85585824_85639373_85639450_85645817_85645955_85655416_85655788_85664562_85664756_85669721_85669831_85682157_85682213_85684740
transcript_60193.nic	chr15	+	1364	7	ISM	ENSG00000170776.22	ENST00000559362.5	5459	15	-25	105690	-9	0	5prime_fragment	FALSE	canonical	3	28	junction_4	3.8151743807532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGGCGTGGAAAGAAA	NA	False	NA	NA	False	AATACA	-22	NA	85380561	85579184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583_85533881_85543771_85543956_85575130_85575330_85578929
transcript_60196.nnic	chr15	-	3683	4	NNC	ENSG00000183655.13	novel	3650	3	NA	NA	-104	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	41.9947086613963	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCCTGCCTTGTGTG	NA	False	NA	-5	True	AATAAA	-15	NA	85795029	85759325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_85760238_85760308_85761012_85768016_85769821_85794765
transcript_60198.known	chr15	-	3650	3	FSM	ENSG00000183655.13	ENST00000337975.6	3650	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	8	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCCTGCCTTGTGTG	-8	True	NA	-5	True	AATAAA	-15	NA	85794925	85759325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_85761012_85768016_85769821_85794765
transcript_60199.known	chr15	-	548	2	FSM	ENSG00000183655.13	ENST00000559131.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTGCCCTGCTGGGG	-1	True	NA	NA	False	GGGGCT	-27	NA	85794918	85760616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_85761012_85794765
transcript_60200.nic	chr15	-	3019	2	ISM	ENSG00000183655.13	ENST00000337975.6	3650	3	-33	7669	-33	-6378	5prime_fragment	FALSE	canonical	3	80	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCGCCAACCAGGCATGA	NA	False	NA	NA	False	NA	NA	NA	85794958	85766994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_85769821_85794765
transcript_60201.nic	chr15	-	2838	2	ISM	ENSG00000183655.13	ENST00000337975.6	3650	3	-15	7832	-15	-6541	5prime_fragment	FALSE	canonical	3	80	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCAGGCATGGTGGTGC	NA	False	NA	NA	False	AATACA	-6	NA	85794940	85767157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_85769821_85794765
transcript_60205.known	chr15	-	2622	16	FSM	ENSG00000140538.16	ENST00000557856.5	2622	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.28122516213395	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAGAA	-1	True	NA	NA	False	TATAAA	-30	NA	88256177	87876790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_87877121_87880269_87880429_87929190_87929435_87933011_87933185_87940622_87940754_88032856_88033046_88126270_88126374_88127161_88127227_88135100_88135398_88135898_88136041_88136466_88136610_88137403_88137562_88147334_88147404_88183417_88183490_88184224_88184300_88255905
transcript_60210.known	chr15	-	2315	6	FSM	ENSG00000140543.15	ENST00000564406.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	18.9631221058137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTGGTTGGATGA	5	True	NA	NA	False	AATAAA	-21	NA	88546653	88512482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88536311_88536382_88546539
transcript_60213.known	chr15	-	2276	5	FSM	ENSG00000140543.15	ENST00000268148.13	2276	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	10.2072278312968	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-23	True	NA	NA	False	AATAAA	-24	NA	88546681	88512479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88546539
transcript_60215.known	chr15	-	986	4	FSM	ENSG00000259494.2	ENST00000312475.5	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	46.4279609239471	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTCTCAGCTGATTTG	1	True	NA	-15	True	AATAAA	-15	NA	88467388	88459477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88459864_88464702_88464877_88465586_88465774_88467149
transcript_60217.nnic	chr15	+	1396	3	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	87	junction_2	52.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTCTCATGGAGCCCA	2	True	NA	8	True	AATAAA	-24	NA	88538535	88545302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr15_+_88538860_88543466_88543716_88544479
transcript_60219.nnic	chr15	+	2282	3	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	87	junction_2	52.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAAAGTGTGGCGTTTTC	2	True	NA	11	True	AATAAA	-15	NA	88538535	88546188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr15_+_88538860_88543466_88543716_88544479
transcript_60221.nnic	chr15	+	1540	3	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_2	60	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAGAAATAAAAATCCTG	2	True	NA	-7	True	AATAAA	-9	NA	88538535	88545287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr15_+_88538860_88543466_88543875_88544479
transcript_60223.nnic	chr15	+	2448	3	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_2	60	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCGTTTTCTCTAACA	2	True	NA	18	True	AATAAA	-22	NA	88538535	88546195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr15_+_88538860_88543466_88543875_88544479
transcript_60228.nnic	chr15	+	2145	2	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	192	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAGAAATAAAAATCCTG	2	True	NA	-7	True	AATAAA	-9	NA	88538535	88545287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr15_+_88538860_88543466
transcript_60231.nnic	chr15	+	1147	2	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	126	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTCTCATGGAGCCCA	2	True	NA	8	True	AATAAA	-24	NA	88538535	88545302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr15_+_88538860_88544479
transcript_60233.nnic	chr15	+	2040	2	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	126	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCGTTTTCTCTAACA	2	True	NA	18	True	AATAAA	-22	NA	88538535	88546195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr15_+_88538860_88544479
transcript_60235.known	chr15	-	1002	2	FSM	ENSG00000259494.2	ENST00000558531.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCGAGGTGTAATTTGG	-1	True	NA	NA	False	NA	NA	NA	88467390	88465012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88465774_88467149
transcript_60236.known	chr15	+	3392	6	FSM	ENSG00000181991.16	ENST00000325844.9	3392	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	40.4949379552556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTGTCTCTTAATCAT	2	True	NA	11	True	AATAAA	-18	NA	88467707	88480776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467907_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_60237.known	chr15	+	766	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	124.383228371031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAATTTTGAGATTTT	12	True	NA	12	True	AATAAA	-14	NA	88467717	88478259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
transcript_60238.known	chr15	+	2002	6	FSM	ENSG00000181991.16	ENST00000559323.5	2002	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.150572200052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	0	True	NA	16	True	AATAAA	-18	NA	88467705	88478263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467907_88469146_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_60239.known	chr15	+	453	2	FSM	ENSG00000181991.16	ENST00000559125.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAGTGAATGTGAGAT	-2	True	NA	85	True	AGTAAA	-23	NA	88467677	88468258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467910
transcript_60240.known	chr15	+	458	3	FSM	ENSG00000181991.16	ENST00000560850.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCATTTACCCTCCCA	2	True	NA	19	True	AATAAA	-14	NA	88467707	88472620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467907_88468025_88472354
transcript_6026.nic	chr1	+	5996	19	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	64.7956188505228	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	NA	False	NA	5	True	AATAAA	-13	NA	28914501	29120038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29060421_29060485_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
transcript_60269.nic	chr15	+	3478	4	NIC	ENSG00000181026.15	novel	3072	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	276.674297083532	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	0	True	NA	28	True	AATAAA	-18	NA	88621348	88632281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_88621798_88626145_88626750_88629225_88629427_88630057
transcript_60270.nic	chr15	+	3340	4	NIC	ENSG00000181026.15	novel	3072	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	289.331413204074	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	4	True	NA	28	True	AATAAA	-18	NA	88621352	88632281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_88621664_88626145_88626750_88629225_88629427_88630057
transcript_60273.known	chr15	+	3072	4	FSM	ENSG00000181026.15	ENST00000332810.4	3072	4	0	0	0	0	multi-exon	TRUE	canonical	3	515	junction_1	71.3411210702184	3026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	-9	True	NA	28	True	AATAAA	-18	NA	88621339	88632281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88621383_88626145_88626750_88629225_88629427_88630057
transcript_60274.known	chr15	+	1583	4	FSM	ENSG00000172183.16	ENST00000306072.10	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.2836838484589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAATTTTTTTTTTT	-6	True	NA	NA	False	AATAAA	-17	NA	88639015	88656483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88639077_88639342_88639595_88652109_88652311_88655414
transcript_60275.known	chr15	+	634	4	FSM	ENSG00000172183.16	ENST00000559876.2	634	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	18.7082869338697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCATCCAGCCCGTTCC	-7	True	NA	-88	True	NA	NA	NA	88638952	88655531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88639077_88639342_88639595_88652169_88652311_88655414
transcript_60276.known	chr15	+	4159	10	FSM	ENSG00000157766.19	ENST00000558207.5	4159	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.94999208608714	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGGCTTTAGAGCAAT	-3	True	NA	NA	False	CATAAA	-29	NA	88803473	88851521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88803810_88836199_88836277_88838662_88839047_88840011_88840187_88841739_88841868_88843354_88843649_88845504_88845883_88847242_88847418_88847910_88848039_88849437
transcript_60295.known	chr15	-	3071	6	FSM	ENSG00000140511.12	ENST00000558770.5	3071	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	120.867530793013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCAGCCCTTTTCTGTG	4	True	NA	-6	True	AATAAA	-24	NA	88895531	88877294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88878257_88878966_88879270_88879417_88880611_88881356_88881726_88887174_88887346_88895458
transcript_60298.known	chr15	-	1547	6	FSM	ENSG00000140511.12	ENST00000562889.5	1547	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	123.245446163337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGTAAAGCAAACAGAAC	6640	False	NA	NA	False	TTTAAA	-27	NA	88895597	88877830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88892973_88893113_88895458
transcript_60303.known	chr15	-	1892	5	FSM	ENSG00000140511.12	ENST00000359595.8	1892	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	40.1901729282172	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCTTTTCTGTGT	-9	True	NA	-5	True	AATAAA	-25	NA	88895544	88877293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88895458
transcript_60308.known	chr15	-	807	3	FSM	ENSG00000140511.12	ENST00000563808.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGACAGAGCTGGGGTC	22	True	NA	NA	False	NA	NA	NA	88895513	88881144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88881726_88887174_88887346_88895458
transcript_60341.known	chr15	-	1989	9	FSM	ENSG00000140545.15	ENST00000558018.5	1989	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	1040.24849795614	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	0	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88912123_88912177_88913246
transcript_6036.nic	chr1	+	5933	18	NIC	ENSG00000159023.22	novel	2937	20	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_12	69.5243354372631	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	NA	False	NA	5	True	AATAAA	-13	NA	28914501	29120038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
transcript_60364.known	chr15	-	1172	7	FSM	ENSG00000140545.15	ENST00000542878.5	1172	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	907.32587861253	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGGACTGGGGAAG	0	True	NA	NA	False	TTTAAA	-8	NA	88913379	88899314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88913246
transcript_60393.known	chr15	-	1936	8	FSM	ENSG00000140545.15	ENST00000268150.13	1936	8	0	0	0	0	multi-exon	FALSE	canonical	3	2267	junction_2	144.108519200367	15370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	0	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_60394.known	chr15	-	1752	7	FSM	ENSG00000140545.15	ENST00000268151.11	1752	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	810.70723582698	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATATATTTATCTTC	-2	True	NA	-35	True	NA	NA	NA	88913381	88898712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_60395.known	chr15	-	1689	9	FSM	ENSG00000140545.15	ENST00000566497.5	1689	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	813.196739725388	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCAAAATATATTTATCT	-2	True	NA	-37	True	NA	NA	NA	88913381	88898714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899158_88899374_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_60396.known	chr15	+	8424	11	FSM	ENSG00000140526.18	ENST00000352732.10	8424	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	10.0995049383621	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTATGTGTCCTTTG	0	True	NA	12	True	AATAAA	-14	NA	89088455	89202355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89088564_89113724_89113825_89116321_89116522_89151676_89151853_89155366_89155535_89175811_89175996_89185423_89185517_89188192_89188304_89191079_89191150_89193234_89193320_89195226
transcript_60412.known	chr15	+	4733	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	84.2970503362846	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGGTTGAAGTAGG	-15	True	NA	16	True	AATAAA	-16	NA	89243978	89317131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_60417.nic	chr15	+	4116	38	NIC	ENSG00000140525.19	novel	4239	39	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	87.4480666083747	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGTGAACTTTGGGG	-24	True	NA	16	True	AATAAA	-12	NA	89243969	89316471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_60419.nic	chr15	+	4773	38	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	87.4480666083747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGGTTGAAGT	-24	True	NA	13	True	AATAAA	-13	NA	89243969	89317128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_60426.known	chr15	+	4713	37	FSM	ENSG00000140525.19	ENST00000300027.12	4713	37	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_23	113.032481265288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGAGTCAAGAGTGGA	NA	False	NA	NA	False	TATAAA	-20	NA	89243948	89317261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_6043.nic	chr1	+	2176	13	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	6576	-42	4131	5prime_fragment	FALSE	canonical	3	104	junction_12	64.039484347983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGCCAATAGGCCACT	NA	False	NA	9	True	NA	NA	NA	28914501	29058645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588
transcript_6045.nic	chr1	+	2067	12	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	11961	-42	-1254	5prime_fragment	FALSE	canonical	3	274	junction_11	28.3767452224791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACGAGCCACCTGAGC	NA	False	NA	-35	True	NA	NA	NA	28914501	29053260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103
transcript_60455.known	chr15	-	4487	23	FSM	ENSG00000140521.17	ENST00000442287.6	4487	23	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_22	35.4836710204977	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTATCTTCTCATCAAA	-33	True	NA	-17	True	AATAAA	-16	NA	89334861	89316319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89316828_89317375_89317537_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095_89333914_89334684
transcript_6046.nic	chr1	+	2056	12	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-10	11910	2	-1203	5prime_fragment	FALSE	canonical	3	274	junction_11	28.3767452224791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGTCATCAGTCCAAAT	14	True	NA	16	True	NA	NA	NA	28914563	29053311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103
transcript_60492.known	chr15	+	584	6	FSM	ENSG00000140525.19	ENST00000567891.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	166.942385271087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGATTAACACCCTG	-19	True	NA	NA	False	NA	NA	NA	89243974	89261847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820
transcript_60495.known	chr15	-	1952	11	FSM	ENSG00000140519.14	ENST00000268122.9	1952	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGAATGCTCCAATGG	-1	True	NA	NA	False	AATAAA	-24	NA	89496583	89471406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89471856_89472710_89472864_89476754_89476829_89477081_89477207_89477516_89477654_89477836_89477975_89479321_89479489_89480260_89480409_89483066_89483218_89486798_89486986_89496360
transcript_60496.known	chr15	+	6656	22	FSM	ENSG00000140534.14	ENST00000560985.5	6656	22	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	16.9450224800108	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTAAAGTCTCCCAG	79	False	NA	3	True	ATTAAA	-10	NA	89575586	89628012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89576241_89582685_89582966_89584288_89584528_89585707_89585943_89592046_89592177_89594414_89594555_89595392_89595612_89599323_89599476_89600584_89600686_89601297_89601392_89601488_89601569_89601736_89601977_89602795_89602893_89606767_89606826_89608802_89608950_89616404_89616496_89618151_89618211_89619707_89619843_89621392_89621551_89623622_89625787_89625935_89626062_89626955
transcript_6050.nic	chr1	+	818	3	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	71816	-42	-61109	5prime_fragment	FALSE	canonical	3	325	junction_1	6	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAGTAAAAGAAGAAAGC	NA	False	NA	40	True	NA	NA	NA	28914501	28993405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329
transcript_60503.nnic	chr15	-	2714	2	NNC	ENSG00000166813.16	novel	1375	5	NA	NA	41	-2239	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	1	True	NA	NA	False	NA	NA	NA	89655410	89650741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_89652955_89654909
transcript_60504.nic	chr15	-	2285	2	ISM	ENSG00000166813.16	ENST00000445906.1	1375	5	-19	2239	-3	-2239	5prime_fragment	FALSE	canonical	3	35	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	-15	True	NA	NA	False	NA	NA	NA	89655470	89650741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_89652955_89655398
transcript_60505.known	chr15	-	2708	3	FSM	ENSG00000166821.9	ENST00000300056.8	2708	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTGTCTGTGAGTG	26	False	89690780	-3	True	AATAAA	-14	NA	89690754	89681534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89683949_89686430_89686547_89690576
transcript_60507.known	chr15	+	1886	3	FSM	ENSG00000140527.15	ENST00000558000.1	1886	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGTTTAATGGAAAAAC	24	False	NA	NA	False	AATAAA	-18	NA	89690843	89704478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89690858_89701706_89702050_89702949
transcript_60508.known	chr15	+	1640	2	FSM	ENSG00000188095.6	ENST00000341735.5	1640	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGCCTTGTTTTT	2	True	NA	NA	False	AAAAAG	-26	NA	89776331	89778754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89777282_89778064
transcript_60509.known	chr15	-	3662	21	FSM	ENSG00000166825.15	ENST00000300060.7	3662	21	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_20	2.46779253585061	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGACTCATTACTAAACT	-9	True	NA	1	True	AATAAA	-15	NA	89814852	89784894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89785502_89790459_89790542_89790952_89791094_89792159_89792328_89792451_89792563_89793034_89793127_89797574_89797723_89799259_89799316_89799425_89799560_89801110_89801188_89801434_89801608_89803238_89803305_89803441_89803508_89803646_89803791_89803888_89804003_89804252_89804408_89804490_89804618_89805077_89805218_89805320_89805464_89805969_89806807_89814771
transcript_60511.known	chr15	-	2439	10	FSM	ENSG00000250021.7	ENST00000398333.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	230.409994210535	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAAGGTTTGTTGCTGTG	63	False	NA	-11	True	AATACA	-15	NA	89912882	89834307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889141_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
transcript_6052.nic	chr1	+	574	2	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	77484	-42	-66777	5prime_fragment	FALSE	canonical	3	325	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAGAGTCAGATAAAGA	NA	False	NA	NA	False	NA	NA	NA	28914501	28987737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430
transcript_60525.known	chr15	-	1262	7	FSM	ENSG00000157823.17	ENST00000423566.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	222.443750692669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACCAGAGTCACCCGC	19	True	NA	NA	False	NA	NA	NA	89893977	89834981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89877305_89877425_89888520_89888633_89889048_89889141_89893880
transcript_60526.known	chr15	-	738	7	FSM	ENSG00000157823.17	ENST00000558011.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	214.935390809011	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTTGAGCCTTAGAAG	2	True	NA	NA	False	NA	NA	NA	89893994	89835439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89878264_89878301_89888520_89888633_89889048_89889141_89893880
transcript_60528.known	chr15	-	578	6	FSM	ENSG00000157823.17	ENST00000558806.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	185.321774219869	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCCAGAGATTCCTC	-32	True	NA	NA	False	AAAACA	-2	NA	89894028	89835593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889137_89893880
transcript_6053.known	chr1	-	2468	2	FSM	ENSG00000253304.2	ENST00000521452.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTGGTGTGTCTGAG	8	True	NA	-13	True	AATAAA	-16	NA	29123903	29119428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29121849_29123855
transcript_60530.known	chr15	-	7587	6	FSM	ENSG00000242498.8	ENST00000357484.10	7587	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.87054001888146	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGAGTCTAATGTTTTAT	-7	True	NA	NA	False	CATAAA	-16	NA	89912952	89895005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89901804_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
transcript_60535.known	chr15	+	4676	5	FSM	ENSG00000140548.10	ENST00000268154.9	4676	5	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_3	5.35607132140714	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTGACTGCAAATGCT	8	True	NA	14	True	AATAAA	-14	NA	90001323	90082191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90001615_90067109_90068596_90073070_90073263_90074115_90074291_90079659
transcript_6054.known	chr1	-	2300	6	FSM	ENSG00000116350.18	ENST00000373795.7	2300	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	44.2791147156309	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGGTGTTTGAATTGA	-30	True	NA	-14	True	AATAAA	-22	NA	29181900	29147742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_60545.known	chr15	-	2658	11	FSM	ENSG00000182054.10	ENST00000330062.8	2658	11	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	49.4716080191457	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCCTCTGCATAGTA	16	True	NA	-16	True	AATAAA	-30	NA	90102468	90083044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90090478_90090645_90091552_90091645_90102275
transcript_60547.known	chr15	-	1449	9	FSM	ENSG00000182054.10	ENST00000560061.1	1449	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	157.169444788101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCTCTTCACAAAATT	16	True	NA	-21	True	NA	NA	NA	90102468	90083995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90102275
transcript_60553.known	chr15	+	3781	15	FSM	ENSG00000185033.15	ENST00000332496.10	3781	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	39.8164154435769	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTCAAGGACAGTTGC	15	True	NA	45	True	AATAAA	-32	NA	90184962	90229670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90185082_90201457_90201736_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
transcript_60556.nic	chr15	+	3546	14	NIC	ENSG00000185033.15	novel	3781	15	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_1	50.6381758367243	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTCAAGGACAGTTGC	-28	True	NA	45	True	AATAAA	-32	NA	90184919	90229670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90185082_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
transcript_60557.known	chr15	+	3807	14	FSM	ENSG00000185033.15	ENST00000411539.7	3780	14	-11	-16	-11	-3	multi-exon	FALSE	canonical	3	139	junction_6	15.7551531909723	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGACAGTTGCTTTTTG	-21	True	NA	51	True	AATAAA	-38	NA	90201318	90229676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90201736_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
transcript_60571.known	chr15	-	906	8	FSM	ENSG00000185043.12	ENST00000650306.1	906	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	253.923176555108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	208	False	NA	-18	True	AATAAA	-16	NA	90233960	90230249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90231683_90231789_90232218_90232328_90233668_90233704_90233918
transcript_60576.known	chr15	-	1141	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_2	37.446257786623	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCTGAAGAATTAAAAAC	-11	True	NA	-2	True	AGTAAA	-16	NA	90233941	90229974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
transcript_60578.known	chr15	-	1096	7	FSM	ENSG00000185043.12	ENST00000612800.1	1096	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	194.820786593446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTGACATGAGATACAC	10	True	NA	-14	True	AATAAA	-20	NA	90234047	90230245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232448_90233668_90233704_90233834
transcript_60581.nic	chr15	-	2213	6	NIC	ENSG00000185043.12	novel	1096	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	459	junction_2	37.5584877224842	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	-17	True	NA	-18	True	AATAAA	-16	NA	90233947	90230249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90233704_90233834
transcript_60598.known	chr15	+	1340	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	783.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	0	True	NA	15	True	AATAAA	-17	NA	90265671	90272211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90265877_90266287_90266399_90271187
transcript_60600.known	chr15	+	2784	2	FSM	ENSG00000182768.9	ENST00000331497.3	2784	2	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATCAATTATTATTG	-13	True	NA	NA	False	ATTAAA	-16	NA	90265658	90273231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90266399_90271187
transcript_60601.known	chr15	+	3163	4	FSM	ENSG00000196391.11	ENST00000354377.8	3163	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGAAAATTTTGGCTAA	8	True	NA	31	True	TATAAA	-43	NA	90352283	90362847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90352412_90354641_90354765_90358850_90358958_90360042
transcript_60603.known	chr15	+	7205	38	FSM	ENSG00000140575.13	ENST00000268182.10	7205	38	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_16	63.0474446553932	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTTTCTCAGTT	-32	True	NA	19	True	AATAAA	-15	NA	90388241	90502239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544_90492712_90494712_90494836_90497231_90497341_90499994
transcript_60607.nic	chr15	+	4817	36	ISM	ENSG00000140575.13	ENST00000268182.10	7205	38	-33	7471	-33	0	5prime_fragment	FALSE	canonical	3	378	junction_16	55.5878418655132	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACAGCAGCAAGACTA	NA	False	NA	NA	False	AAAAAG	-44	NA	90388208	90494768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544_90492712_90494712
transcript_60608.nic	chr15	+	4761	35	ISM	ENSG00000140575.13	ENST00000268182.10	7205	38	-33	9528	-33	95	5prime_fragment	TRUE	canonical	3	378	junction_16	54.138295293637	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATTTTTTCTTTTTA	NA	False	NA	NA	False	TATAAA	-45	NA	90388208	90492711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544
transcript_60609.nic	chr15	+	2955	24	ISM	ENSG00000140575.13	ENST00000633485.1	5863	39	-38	24154	-33	-403	5prime_fragment	FALSE	canonical	3	378	junction_16	38.0497137746985	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACAGTTGTCTGATA	NA	False	NA	NA	False	AGTAAA	-18	NA	90388208	90476700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662
transcript_60611.nic	chr15	+	2918	23	ISM	ENSG00000140575.13	ENST00000633485.1	5863	39	-38	26160	-33	455	5prime_fragment	FALSE	canonical	3	378	junction_16	38.894883769862	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCCCAGTGCCAGCGGG	NA	False	NA	NA	False	NA	NA	NA	90388208	90474694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484
transcript_60614.known	chr15	+	1201	2	FSM	ENSG00000140575.13	ENST00000559809.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTGTATGTGTG	34	False	NA	5	True	AATAAA	-28	NA	90388354	90391932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90388397_90390773
transcript_60617.known	chr15	+	5214	15	FSM	ENSG00000140577.17	ENST00000268184.11	5214	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	7.54611671994413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTGTTTTTCTTCA	3	True	NA	26	True	ATTAAA	-27	NA	90529922	90645345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90530204_90540038_90540138_90593635_90593756_90602323_90602386_90604384_90604448_90607377_90607479_90614452_90614489_90617882_90617969_90619740_90619791_90625775_90625994_90629233_90629533_90638445_90638647_90638734_90638816_90641096_90641200_90641931
transcript_60618.known	chr15	+	5209	15	FSM	ENSG00000140577.17	ENST00000420329.6	5209	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	8.13690258473514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTGTTTTTCTTCA	5	True	NA	26	True	ATTAAA	-27	NA	90529924	90645345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90530204_90540038_90540138_90593635_90593756_90602323_90602386_90604384_90604448_90607377_90607479_90614452_90614489_90617882_90617969_90619740_90619791_90625775_90625994_90629233_90629533_90638445_90638647_90638734_90638816_90641096_90641200_90641934
transcript_60620.nic	chr15	+	2371	3	ISM	ENSG00000140577.17	ENST00000691029.1	3631	17	-61	49754	-49	0	5prime_fragment	FALSE	canonical	3	22	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATGTATATTTTTTCAG	209	False	NA	NA	False	NA	NA	NA	90529873	90595577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90530204_90540038_90540138_90593635
transcript_60621.known	chr15	-	502	3	FSM	ENSG00000259736.1	ENST00000558105.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTTTCCCATAGAGA	75	False	NA	NA	False	ATTAAA	-16	NA	90717049	90712992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90713300_90714920_90715043_90716976
transcript_60622.known	chr15	+	5240	22	FSM	ENSG00000197299.13	ENST00000355112.8	5240	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	28.503808871472	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCATTCTTTTGCC	-22	True	NA	NA	False	AATAAA	-16	NA	90717345	90816166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
transcript_60629.nic	chr15	+	2250	7	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-624	51039	-607	95	5prime_fragment	FALSE	canonical	3	184	junction_1	15.1510909031513	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCTCTTATTTCCCAG	NA	False	NA	NA	False	NA	NA	NA	90716738	90760917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593
transcript_60631.nnic	chr15	+	4243	16	NNC	ENSG00000140564.13	novel	4189	15	NA	NA	-508	0	intron_retention	FALSE	canonical	2	3	junction_1	74.9841464725859	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTCTCCAGTGTGGTA	-12	True	NA	9	True	ATTAAA	-22	NA	90871030	90883457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_90871151_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_60632.known	chr15	+	4191	16	FSM	ENSG00000140564.13	ENST00000610579.4	4191	16	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	41.1411661910009	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCCAGTGTGGTAC	454	False	NA	10	True	ATTAAA	-23	NA	90871538	90883458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90871606_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_60633.known	chr15	+	4287	16	FSM	ENSG00000140564.13	ENST00000680053.1	4287	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	74.040049222626	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAAGTCCTCCAAGGGG	-6	True	NA	NA	False	NA	NA	NA	90872169	90883564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90872227_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_60634.known	chr15	+	4345	16	FSM	ENSG00000140564.13	ENST00000618099.4	4345	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	74.2759419701666	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCCAGTGTGGTAC	1	True	NA	10	True	ATTAAA	-23	NA	90872877	90883458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90873099_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_60639.nic	chr15	+	2872	19	NIC	ENSG00000182511.12	novel	2737	19	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	17.0485870671928	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	-8	True	NA	9	True	AATAAA	-20	NA	90884463	90895776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90884640_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_60643.known	chr15	+	2737	19	FSM	ENSG00000182511.12	ENST00000328850.8	2737	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	13.2842847839928	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	0	True	NA	9	True	AATAAA	-20	NA	90884503	90895776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90884545_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_60646.nic	chr15	+	3050	18	NIC	ENSG00000182511.12	novel	2737	19	NA	NA	-371	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	17.8540798163883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	851	False	NA	9	True	AATAAA	-20	NA	90884075	90895776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90884640_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_60654.nic	chr15	+	2954	18	NIC	ENSG00000182511.12	novel	2737	19	NA	NA	-370	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	14.0074127681291	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	852	False	NA	9	True	AATAAA	-20	NA	90884076	90895776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90884545_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_60656.nic	chr15	+	2621	18	NIC	ENSG00000182511.12	novel	2737	19	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	17.0602433486216	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	5	True	NA	9	True	AATAAA	-20	NA	90884445	90895776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90884545_90885036_90885259_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
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transcript_6068.known	chr1	-	2515	10	FSM	ENSG00000116353.16	ENST00000263702.11	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_9	24.3447461820136	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTCTCCCTTATCA	-20	True	NA	NA	False	NA	NA	NA	29230934	29192656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29230730
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transcript_60686.nic	chr15	+	5208	24	NIC	ENSG00000196547.15	novel	6394	23	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_2	20.1443749272552	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGAATCAACTGAAGAC	-18	True	NA	17	True	AATAAA	-18	NA	90902395	90921191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90902527_90903230_90903433_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
transcript_6069.known	chr1	-	2416	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	67.4190873071813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTAATGCTGTAAAGA	-10	True	NA	-4	True	ATTAAA	-22	NA	29230924	29192872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
transcript_60695.known	chr15	+	4002	23	FSM	ENSG00000140553.18	ENST00000672480.1	4002	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	115.470050855744	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	-3	True	NA	26	True	AATAAA	-17	NA	90930179	90954093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90930256_90933976_90934144_90934338_90934550_90934943_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_60699.known	chr15	+	3252	20	FSM	ENSG00000140553.18	ENST00000418476.2	3252	20	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	34.7078028539314	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	-8	True	NA	26	True	AATAAA	-17	NA	90935284	90954093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90935376_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_60723.nic	chr15	+	1997	9	NIC	ENSG00000166965.13	novel	2675	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	20	junction_1	33.1565887117478	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTGATGGTCATTTT	-28	True	NA	17	True	NA	NA	NA	90954862	90962342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90954949_90955799_90955884_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
transcript_60732.known	chr15	+	1871	8	FSM	ENSG00000166965.13	ENST00000555155.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	38.1677286487431	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTCAAGTGATACAGC	-10	True	NA	-1	True	NA	NA	NA	90954880	90962324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90954949_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960333_90960499_90961024_90961055_90961617
transcript_60758.known	chr15	-	1309	5	FSM	ENSG00000184508.12	ENST00000646620.1	1309	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	67.3980711890185	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTGCTCCTTCTCC	31	False	NA	-1	True	AATAAA	-24	NA	90935130	90930917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428_90932807_90934984
transcript_60761.known	chr15	-	1856	4	FSM	ENSG00000184508.12	ENST00000394272.8	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	8.73053390247253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTGGAAAAGCGATCA	-5	True	NA	-15	True	ATTAAA	-16	NA	90932549	90929967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428
transcript_60762.known	chr15	-	1047	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	72.0293150198044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-2	True	NA	-8	True	AATAAA	-17	NA	90932546	90930924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
transcript_60763.known	chr15	-	1220	3	FSM	ENSG00000184508.12	ENST00000494993.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-8	True	NA	-8	True	AATAAA	-17	NA	90932552	90930924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90931406_90931703_90931945_90932054
transcript_60765.known	chr15	-	2501	23	FSM	ENSG00000184056.15	ENST00000333371.8	2501	23	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_17	11.2811552072435	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTCGTTCTGGACA	-19	True	NA	-3	True	AATAAA	-21	NA	91022594	90998672	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91017804_91017886_91022153
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transcript_60787.known	chr15	-	3072	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	97.9025963258735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-2	True	NA	-3	True	AATAAA	-30	NA	90994535	90966039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_60790.nnic	chr15	-	2513	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	76.5434478468538	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	83	False	90994586	-3	True	AATAAA	-30	NA	90994567	90966039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90966654_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
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transcript_60794.nic	chr15	-	2445	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	65.1276398118005	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	0	True	NA	-13	True	AATAAA	-20	NA	90994586	90966049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_60795.known	chr15	-	4087	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	69.0223358068726	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-40	True	AATATA	-13	NA	90995629	90966076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_608.known	chr1	+	977	4	FSM	ENSG00000217801.11	ENST00000427998.6	982	4	5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	0	True	NA	21	True	NA	NA	NA	1059733	1066456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1059847_1060279_1060394_1063078_1063202_1065829
transcript_60813.nnic	chr15	+	2490	11	NNC	ENSG00000176463.14	novel	2705	11	NA	NA	-20	22	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_10	25.757329054077	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAAGTTGAAAACATTG	338	False	NA	NA	False	AATAAA	-20	NA	91853687	92163568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_91854089_91915992_91916459_92094880_92094980_92104278_92104543_92120464_92120630_92126060_92126260_92128350_92128490_92146983_92147160_92150949_92151015_92162755_92162999_92163295
transcript_60814.known	chr15	+	2705	11	FSM	ENSG00000176463.14	ENST00000424469.2	2705	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	26.0048072478917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCATGCTCTAAT	17	False	NA	NA	False	ATTAAA	-19	NA	91853855	92172435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_91854089_91915992_91916459_92094880_92094980_92104278_92104543_92120464_92120630_92126060_92126260_92128350_92128490_92146983_92147160_92150949_92151015_92162755_92162999_92171779
transcript_60816.known	chr15	+	5102	10	FSM	ENSG00000176463.14	ENST00000318445.11	5102	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	15.4200446749605	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGAGTTCTCTCTCTTC	-16	True	NA	4	True	AATAAA	-14	NA	91853707	92165903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_91854089_91915992_91916459_92094880_92094980_92104278_92104543_92120464_92120630_92126060_92126260_92128350_92128490_92146983_92147160_92150949_92151015_92162755
transcript_60820.known	chr15	+	5655	6	FSM	ENSG00000140557.12	ENST00000268164.8	5655	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	7.32120208708925	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTAGAGGGCTTTATA	7	True	NA	NA	False	AATAAA	-24	NA	92393880	92468728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92394163_92430048_92430112_92434246_92434376_92438352_92438611_92444635_92444930_92464099
transcript_60828.known	chr15	-	2604	3	FSM	ENSG00000185442.13	ENST00000327355.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	9.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTACCTTGGGCTTG	-17	True	NA	-10	True	AATAAA	-18	NA	92655775	92617447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_92619460_92630213_92630346_92655315
transcript_60829.known	chr15	-	221	2	FSM	ENSG00000185442.13	ENST00000555613.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCGAGGTCAGGCATGG	1811	False	NA	NA	False	NA	NA	NA	92655351	92630160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_92630346_92655315
transcript_60830.known	chr15	+	9350	39	FSM	ENSG00000173575.22	ENST00000394196.9	9350	39	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	8.25292695497178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTAACACGTTGCATT	-6	True	NA	23	True	ATTAAA	-25	NA	92900323	93027996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176_93002318_93004616_93004752_93009144_93009324_93012344_93012445_93014695_93014910_93020011_93020259_93024371
transcript_60832.known	chr15	+	7764	38	FSM	ENSG00000173575.22	ENST00000626874.2	7764	38	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_16	7.82757949371708	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGTTCCGCAGGCTGT	3053	False	NA	NA	False	NA	NA	NA	92900188	93022162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176_93002318_93004616_93004752_93009144_93009324_93012344_93012445_93014695_93014910_93020011
transcript_60849.known	chr15	+	2232	13	FSM	ENSG00000173575.22	ENST00000420239.7	2232	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7.1278015934477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGGAGTTTTTAT	-6	True	NA	6	True	AATAAA	-17	NA	92900323	92949234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951
transcript_60855.nnic	chr15	+	1103	6	ISM	ENSG00000173575.22	ENST00000420239.7	2232	13	-9	11638	-6	8	5prime_fragment	FALSE	canonical	3	19	junction_2	5.53534100123922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGCCAGAAGACCTGT	-15	True	NA	NA	False	NA	NA	NA	92900314	92937596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517
transcript_60856.known	chr15	+	802	5	FSM	ENSG00000272888.8	ENST00000556895.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_1	133.139729232112	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCACACTAACCCAGATA	12	False	NA	-78	True	AAGAAA	-2	NA	92882861	92897975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92883187_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_60862.known	chr15	-	3174	4	FSM	ENSG00000182175.15	ENST00000543599.5	3174	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	72.3709579565972	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGTTGGAGTTTGTTTT	761	False	NA	-2	True	AGTAAA	-28	NA	93088523	93043405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93051992_93052508_93072915_93073032_93088280
transcript_60863.known	chr15	-	11350	4	FSM	ENSG00000182175.15	ENST00000329082.12	11359	4	7	2	7	-2	multi-exon	FALSE	canonical	3	28	junction_3	60.587860903723	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCCTGCTCTGTGATCT	0	True	NA	NA	False	AATAAA	-15	NA	93089204	93035272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93051992_93052508_93072915_93073032_93088918
transcript_60867.known	chr15	-	3038	3	FSM	ENSG00000182175.15	ENST00000542321.6	3038	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	1.5	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTAGACGTGTTGG	-10	True	NA	-12	True	AGTAAA	-18	NA	93073148	93043415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93051992_93052508_93072915
transcript_60875.known	chr15	-	989	2	FSM	ENSG00000182175.15	ENST00000557420.1	989	2	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCTGGGACCGCCCAC	-7	True	NA	NA	False	NA	NA	NA	93073145	93044946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93072915
transcript_60876.known	chr15	-	473	2	FSM	ENSG00000182175.15	ENST00000557608.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAACGGGCCAAAGACTC	4	True	NA	NA	False	NA	NA	NA	93073134	93066005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93066260_93072915
transcript_60880.known	chr15	-	1135	4	FSM	ENSG00000258489.4	ENST00000668885.1	1135	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTCTGTGATTT	NA	False	NA	NA	False	AATAAA	-29	NA	95493843	95463586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_95464387_95464719_95464810_95491498_95491550_95493649
transcript_60881.known	chr15	+	4062	8	FSM	ENSG00000140450.9	ENST00000268042.7	4062	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	8.27585620454871	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGAGGTGCTAGTTTT	-11	True	NA	NA	False	AATAAA	-14	NA	97960702	97973833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_97961169_97965599_97965667_97965894_97966043_97968013_97968117_97969122_97969380_97969882_97970046_97970588_97970744_97971130
transcript_60882.known	chr15	-	334	2	FSM	ENSG00000259424.2	ENST00000560221.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGAGATAAGAAGTGGTT	3465	False	NA	-11	True	AATAAA	-35	NA	98647371	98646950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_98647194_98647280
transcript_60890.nic	chr15	-	3436	12	NIC	ENSG00000103852.13	novel	3872	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	18.7590198690198	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTCCTTTCTGTACTT	-28	True	NA	-5	True	AATAAA	-17	NA	99249607	99136323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99241364_99241560_99249416
transcript_60896.known	chr15	+	5852	10	FSM	ENSG00000168904.15	ENST00000301981.8	5852	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	12.6227308191743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGAGTTTTGTGGTGTTT	3	True	NA	NA	False	NA	NA	NA	99251480	99390729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_60898.known	chr15	+	1235	9	FSM	ENSG00000168904.15	ENST00000447360.6	1235	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	28.0131107697806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	27	True	NA	24	True	AATATA	-20	NA	99251504	99386296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
transcript_60905.known	chr15	+	2854	11	FSM	ENSG00000068305.18	ENST00000557785.5	2854	11	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	31.1064302034161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGGAAAAAAAAAGCCATG	-15	True	NA	NA	False	AAAACA	-22	NA	99565979	99713782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
transcript_60908.known	chr15	+	5824	11	FSM	ENSG00000068305.18	ENST00000354410.9	5824	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	45.5412999375292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGGACTGGCTCTTCCTG	280	False	NA	-11	True	NA	NA	NA	99565699	99716466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671519_99671658_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
transcript_60911.nnic	chr15	+	2382	9	NNC	ENSG00000068305.18	novel	2854	11	NA	NA	-2	-17321	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	46.3896540189728	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGAGGGAGGAATTGAC	-17	True	NA	7	True	AATAAA	-17	NA	99565977	99695248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99694075
transcript_60922.known	chr15	-	2847	5	FSM	ENSG00000183060.16	ENST00000332728.8	2847	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.69740215917033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	-40	False	NA	-7	True	AATAAA	-28	NA	99733444	99727400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99731172_99731199_99731717_99732008_99732928_99733029_99733344
transcript_60926.nic	chr15	-	2796	4	NIC	ENSG00000183060.16	novel	559	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	2.16024689946929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-33	True	NA	-11	True	AATAAA	-24	NA	99733437	99727404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99729732_99731172_99731199_99731717_99732008_99733284
transcript_60927.nic	chr15	-	2736	4	NIC	ENSG00000183060.16	novel	559	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	12.4988888395018	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-33	True	NA	-11	True	AATAAA	-24	NA	99733437	99727404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99729732_99731172_99731199_99731717_99732008_99733344
transcript_60929.known	chr15	-	2672	3	FSM	ENSG00000183060.16	ENST00000409796.5	2672	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	26.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	65	False	NA	-11	True	AATAAA	-24	NA	99733339	99727404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99731717_99732008_99733284
transcript_60930.known	chr15	-	2710	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	11	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-33	True	NA	-11	True	AATAAA	-24	NA	99733437	99727404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99731717_99732008_99733344
transcript_60931.known	chr15	-	2431	2	FSM	ENSG00000183060.16	ENST00000545021.2	2431	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	-40	False	NA	-7	True	AATAAA	-28	NA	99733444	99727400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99733344
transcript_60932.known	chr15	-	2222	2	FSM	ENSG00000183060.16	ENST00000496108.5	2222	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTCTTGCAATGGTG	-40	False	NA	NA	False	AATAAA	-17	NA	99733444	99715700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99717823_99733344
transcript_60935.known	chr15	+	4926	6	FSM	ENSG00000183475.13	ENST00000332783.12	4926	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.1442284397967	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGGAGTTGTATTTTA	24	True	NA	19	True	ATTAAA	-22	NA	100602588	100651701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436_100630043_100648322
transcript_60937.known	chr15	+	1694	5	FSM	ENSG00000183475.13	ENST00000343276.4	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.08431365765238	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGATTTCATAAAAAT	44	True	NA	NA	False	AATAAA	-19	NA	100602608	100630209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436
transcript_60941.known	chr15	+	3469	13	FSM	ENSG00000184254.17	ENST00000329841.10	3469	13	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	8.29114319955671	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTTTTTCATTTAA	-1	True	NA	7	True	AATAAA	-18	NA	100879830	100916626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100892509_100892640_100892944_100893007_100893953_100894083_100895932_100896047_100898082_100898186_100900574_100900760_100905522_100905688_100907120_100907279_100908407_100908483_100914700
transcript_60942.known	chr15	+	3104	10	FSM	ENSG00000184254.17	ENST00000346623.6	3104	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.961145377329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTTTTTCATTTAA	43	False	NA	7	True	AATAAA	-18	NA	100879874	100916626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100895932_100896047_100898082_100898186_100900574_100900760_100905522_100905688_100907120_100907279_100908407_100908483_100914700
transcript_60943.known	chr15	-	1439	7	FSM	ENSG00000131871.15	ENST00000398226.7	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	344.908079541975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCAGGAGTGTCCA	8	True	NA	NA	False	NA	NA	NA	101277450	101270816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101271646_101272763_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_60945.known	chr15	-	1218	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_3	89.0721056223552	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTACTTATTTCTCT	-27	True	NA	-8	True	ATTAAA	-21	NA	101277485	101272190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_60946.known	chr15	-	856	4	FSM	ENSG00000131871.15	ENST00000527833.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	99.7095782761115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTGCCAATCTTCAGA	17	True	NA	NA	False	NA	NA	NA	101277441	101274167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101274682_101275254_101275362_101276540_101276676_101277341
transcript_60947.known	chr15	-	556	3	FSM	ENSG00000131871.15	ENST00000529968.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATCAAGAAGAATACACG	-42	True	NA	NA	False	NA	NA	NA	101277500	101275099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101275362_101276540_101276676_101277341
transcript_60948.known	chr15	-	355	2	FSM	ENSG00000131871.15	ENST00000534014.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAATA	5	True	NA	NA	False	AGTAAA	-35	NA	101277453	101276432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101276676_101277341
transcript_60951.known	chr15	-	1052	9	FSM	ENSG00000131876.18	ENST00000254193.11	1052	9	0	0	0	0	multi-exon	FALSE	canonical	3	2311	junction_3	231.296887138586	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-15	True	NA	-9	True	AATAAA	-22	NA	101295248	101281509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_60955.known	chr15	-	924	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	980.736437165293	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	87	False	NA	-13	True	AATAAA	-18	NA	101295204	101281513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_60959.nic	chr15	-	851	7	NIC	ENSG00000131876.18	novel	1052	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_6	939.81406257952	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	17	False	NA	-9	True	AATAAA	-22	NA	101295274	101281509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101295096
transcript_60961.known	chr15	-	2108	7	FSM	ENSG00000131876.18	ENST00000558036.5	2108	7	0	0	0	0	multi-exon	FALSE	canonical	3	2560	junction_2	163.346683127907	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	9	False	NA	-13	True	AATAAA	-18	NA	101295282	101281513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_60963.known	chr15	-	556	6	FSM	ENSG00000131876.18	ENST00000394082.8	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	1316.29033271539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGTGTTAGCAAAGT	88	False	NA	NA	False	NA	NA	NA	101295203	101281653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101295096
transcript_60966.known	chr15	-	509	2	FSM	ENSG00000131876.18	ENST00000561187.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	2749	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAATGAGAAATGAACT	20	False	NA	NA	False	AATACA	-9	NA	101295271	101292838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101293173_101295096
transcript_60967.known	chr15	-	1395	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	94.3029161797237	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGCCTGTTTTCTA	-2	True	NA	63	True	AATAAA	-17	NA	101652381	101641847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_60968.known	chr15	-	1267	5	FSM	ENSG00000184277.13	ENST00000428002.6	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	109.964767084735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	3	True	NA	NA	False	NA	NA	NA	101652376	101632976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_60969.known	chr15	-	1329	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	37.3162163140906	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	-12	True	NA	65	True	AATAAA	-19	NA	101652391	101641845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_60972.known	chr15	-	3481	19	FSM	ENSG00000185418.16	ENST00000335968.8	3481	19	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_16	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTAGTATAAGGTG	-18	True	NA	NA	False	AATATA	-9	NA	101724473	101653595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101654731_101656921_101657037_101657784_101657858_101661711_101661817_101671485_101671587_101671670_101671749_101675599_101675738_101684074_101684238_101685895_101686063_101701085_101701185_101702238_101702386_101703858_101703938_101705682_101705748_101708792_101708911_101711879_101712002_101714839_101714964_101721125_101721323_101723092_101723165_101724090
transcript_60975.nic	chr15	-	502	2	ISM	ENSG00000185418.16	ENST00000615656.1	2356	19	-104	67139	-73	-8441	5prime_fragment	FALSE	canonical	3	79	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAAAGCGAGGCTGAC	NA	False	NA	NA	False	AAAAAG	-8	NA	101724546	101723118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_101723165_101724090
transcript_60976.known	chr15	-	503	3	FSM	ENSG00000259658.5	ENST00000558592.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	101745710	101737098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101737370_101744440_101744597_101745634
transcript_60980.nic	chr15	+	2199	11	NIC	ENSG00000185596.16	novel	1679	10	NA	NA	-484	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_7	96.8452373635379	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGAACTGAGCAGAAA	NA	False	NA	NA	False	NA	NA	NA	101961118	101976543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_101961642_101966069_101966224_101972582_101972695_101972900_101973048_101973219_101973353_101973591_101973728_101973904_101974107_101974194_101974354_101975012_101975166_101975923_101975993_101976132
transcript_60987.known	chr15	+	427	3	FSM	ENSG00000185596.16	ENST00000559884.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAACTCACACTTCAT	-4	True	NA	NA	False	TATAAA	-24	NA	101961602	101966755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_101961642_101966069_101966224_101966521
transcript_60988.known	chr16	+	1054	2	FSM	ENSG00000231439.4	ENST00000527434.1	1054	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	22909	25123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23086_24245
transcript_60989.known	chr16	-	1372	3	FSM	ENSG00000161980.6	ENST00000293860.6	1372	3	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_2	25.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATGTTGATCAGTTCC	9	True	NA	NA	False	NA	NA	NA	53608	46406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47558_51557_51646_53475
transcript_60993.known	chr16	+	1085	5	FSM	ENSG00000161981.11	ENST00000383018.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_2	50.8004675175337	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGCTCACAGTGGC	-30	True	NA	13	True	AATAAA	-24	NA	53828	57668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
transcript_61.known	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2729	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00171_+_0_500
transcript_610.known	chr1	-	2099	12	FSM	ENSG00000131591.18	ENST00000467751.5	2099	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	33.2376864666134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCGTTCCGAGCTGCT	6	True	NA	-18	True	TATAAA	-14	NA	1116089	1081824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091277_1091375_1091471_1091566_1091990_1092104_1116059
transcript_61005.known	chr16	-	2992	18	FSM	ENSG00000007384.15	ENST00000262316.10	2992	18	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_2	50.8306095286285	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCTTCCCTATCCTTC	8	True	NA	-6	True	AATAAA	-35	NA	72631	58058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
transcript_61012.nic	chr16	-	3102	17	NIC	ENSG00000007384.15	novel	2992	18	NA	NA	-44	0	intron_retention	FALSE	canonical	1	61	junction_2	51.8915636206889	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGCTTCCCTATCC	NA	False	NA	-9	True	AATAAA	-32	NA	72675	58061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_65040_72512
transcript_61018.nnic	chr16	-	2871	17	NIC	ENSG00000007384.15	novel	2992	18	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	1	19	junction_7	61.582135193577	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGCTTCCCTATCC	NA	False	NA	-9	True	AATAAA	-32	NA	72675	58061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
transcript_6104.known	chr1	+	5550	30	FSM	ENSG00000060656.20	ENST00000428026.6	5550	30	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_20	49.6421199320057	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTCACCAGCCTGA	1	True	NA	41	True	AATAAA	-32	NA	29236548	29326813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311545_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_61058.known	chr16	-	3128	14	FSM	ENSG00000103148.17	ENST00000611875.5	3128	14	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_13	47.2016948848238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGTGGAGCCTCCCT	-21	True	NA	NA	False	NA	NA	NA	138673	85385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_117300_117376_119125_119256_130521_130592_138149_138335_138641
transcript_6107.nnic	chr1	+	5171	27	NIC	ENSG00000060656.20	novel	5573	30	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	55.8337557757282	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	NA	False	NA	28	True	AATAAA	-19	NA	29236473	29326800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_61076.known	chr16	-	2784	12	FSM	ENSG00000103148.17	ENST00000399953.7	2784	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	36.7558394753431	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	185	False	NA	-44	True	AATAAA	-32	NA	138512	85800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149
transcript_61078.known	chr16	-	2812	11	FSM	ENSG00000103148.17	ENST00000621703.4	2812	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	45.8289209997355	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	-18	True	NA	-44	True	AATAAA	-32	NA	138670	85800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_130521_130592_138149
transcript_61086.known	chr16	+	1193	5	FSM	ENSG00000103152.12	ENST00000219431.4	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	223.804602276182	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	20	True	NA	24	True	AATAAA	-15	NA	78256	85842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78334_79138_79332_79424_79701_83051_83257_85400
transcript_61088.known	chr16	+	1036	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	29.2612751298063	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTAGCCAGAGCTC	-12	True	NA	28	True	AATAAA	-19	NA	78224	85846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78334_79424_79701_83051_83257_85400
transcript_61089.known	chr16	+	576	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	-2	True	NA	NA	False	AATAAA	-17	NA	172875	173710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_173008_173124_173330_173471
transcript_6109.nic	chr1	+	4734	25	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	36.2404920481068	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	NA	False	NA	28	True	AATAAA	-19	NA	29260133	29326800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_61090.known	chr16	+	577	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	0	True	NA	NA	False	AATAAA	-17	NA	176679	177522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_176812_176928_177134_177282
transcript_61091.known	chr16	+	528	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	-10	True	NA	9	True	AGTAAA	-17	NA	180458	181179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_180582_180665_180871_180979
transcript_61093.nic	chr16	-	1576	12	NIC	ENSG00000007392.17	novel	1520	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	223.331721551686	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	5222	False	NA	-31	True	AATAAA	-23	NA	229457	188989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_61101.known	chr16	-	1520	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	185.28356645963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCCTCTGCGTAGAG	-19	True	NA	-16	True	AATAAA	-38	NA	229450	188974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_61105.known	chr16	-	989	11	FSM	ENSG00000007392.17	ENST00000418978.5	989	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	232.200538328403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGCGTCGGAGGCGGTCA	5305	False	NA	NA	False	NA	NA	NA	229374	190121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_61107.known	chr16	-	1504	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	140.795973567569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTGCGTAGAGGCTT	5216	False	NA	-12	True	AATAAA	-42	NA	229463	188970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_61110.known	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	70.1465837363199	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-18	True	NA	-31	True	AATAAA	-23	NA	229449	188989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_61116.known	chr16	-	1211	10	FSM	ENSG00000007392.17	ENST00000419516.5	1211	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	195.092254214054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-3	True	NA	NA	False	NA	NA	NA	229434	189895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_61122.known	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_8	72.4530020081984	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	5216	False	NA	-10	True	AATAAA	-44	NA	229463	188968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_61128.nic	chr16	-	653	5	ISM	ENSG00000007392.17	ENST00000293872.13	1434	10	-33	17014	-19	0	5prime_fragment	FALSE	canonical	3	357	junction_4	78.9568711386159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTGAGATAAGTGCCTT	-6	True	NA	32	True	AAAAAG	-27	NA	229482	206003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_206148_208077_208189_220648_220748_227241_227337_229278
transcript_61131.known	chr16	-	2376	17	FSM	ENSG00000076344.16	ENST00000316163.9	2376	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	4.35845084290279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCTGCTGTGGGTGCA	17	True	NA	-14	True	AATAAA	-25	NA	275914	268310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_269384_269502_269586_270522_270662_270743_270832_270983_271100_271201_271316_271398_271461_271539_271570_272862_272932_273474_273557_273759_273837_274042_274102_274213_274266_274975_275083_275282_275334_275401_275499_275837
transcript_61132.known	chr16	-	2399	17	FSM	ENSG00000076344.16	ENST00000397770.8	2399	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	4.42824739597959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTGTGGGTGCAGCTT	-13	True	NA	-10	True	AATAAA	-29	NA	275944	268306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_269384_269502_269586_270522_270662_270743_270832_270983_271100_271201_271316_271398_271461_271539_271570_272862_272932_273474_273557_273759_273837_274042_274102_274213_274266_274975_275083_275282_275334_275401_275499_275848
transcript_61138.known	chr16	+	2687	15	FSM	ENSG00000167930.17	ENST00000666018.1	2687	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	307.759646477572	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGATCCCGGCCGGGC	NA	False	NA	NA	False	AATAAA	-32	NA	234520	269955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810_264909_268775_269006_269519
transcript_6114.nnic	chr1	+	4284	22	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_6	49.3849243018486	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	NA	False	NA	28	True	AATAAA	-19	NA	29260133	29326800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_61169.known	chr16	+	2901	13	FSM	ENSG00000167930.17	ENST00000301678.7	2901	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	248.44762470634	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGTGCGTCTGCCTGT	28	False	NA	39	True	NA	NA	NA	234845	266120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_234858_249548_249655_254387_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_61174.nic	chr16	+	2908	13	NIC	ENSG00000167930.17	novel	2909	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_4	230.202567801105	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	-23	True	NA	15	True	AATAAA	-23	NA	234794	266096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259995_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_6119.known	chr1	+	619	3	FSM	ENSG00000060656.20	ENST00000527027.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	50.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTGTCCTCACTAACC	-6	True	NA	NA	False	NA	NA	NA	29260180	29275685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_29260268_29260609_29260904_29275447
transcript_6120.known	chr1	+	887	2	FSM	ENSG00000186056.10	ENST00000414763.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGCCGCGTCCGGCA	-2	True	NA	NA	False	NA	NA	NA	30718781	30721723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_30719233_30721287
transcript_61210.known	chr16	+	964	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	4.58693797647189	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTCGTCTCTTT	-7	True	NA	14	True	ATTAAA	-22	NA	280590	283010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
transcript_61213.known	chr16	+	432	3	FSM	ENSG00000167930.17	ENST00000447499.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGGTGAGCCTCGGCT	12	True	NA	NA	False	NA	NA	NA	234829	254674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_234858_249548_249659_254380
transcript_61214.known	chr16	+	2272	15	FSM	ENSG00000167930.17	ENST00000659283.1	2272	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	307.759646477572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTTGAGAAATACTACT	-16	True	NA	NA	False	TTTAAA	-6	NA	234801	272183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810_264909_268775_269006_271881
transcript_61215.known	chr16	-	3707	11	FSM	ENSG00000103126.15	ENST00000262320.8	3707	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	72.4855847738017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	1	True	NA	-4	True	AATAAA	-18	NA	352723	287439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_288249_289439_289608_291189_291298_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147_347107_352368
transcript_61216.known	chr16	-	3324	10	FSM	ENSG00000103126.15	ENST00000354866.7	3324	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_9	41.4302924899459	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGTGGTGTGTCTT	2824	False	NA	-5	True	AATAAA	-17	NA	352449	287440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_288249_289439_289608_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147_347107_352368
transcript_61224.known	chr16	-	3672	13	FSM	ENSG00000129925.11	ENST00000431232.7	3672	13	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_8	53.0688755821673	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTTTTTACATTTTTTCT	-13	True	NA	-17	True	ACTAAA	-1	NA	381978	370787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377849_381700
transcript_61246.nnic	chr16	-	1142	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	724.921402636175	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	5749	False	NA	-21	True	AGTAAA	-16	NA	370418	367393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370335
transcript_61247.known	chr16	-	800	6	FSM	ENSG00000086504.18	ENST00000441883.5	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	720.756824456071	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTCAGAGCCGGCGG	5735	False	NA	NA	False	NA	NA	NA	370432	367723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370361
transcript_61248.nnic	chr16	-	1113	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	737.936203204586	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	5712	False	NA	-21	True	AGTAAA	-16	NA	370455	367393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370401
transcript_61249.nnic	chr16	-	1094	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	740.590143061599	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	5712	False	NA	-21	True	AGTAAA	-16	NA	370455	367393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370420
transcript_61250.nic	chr16	-	1124	6	NIC	ENSG00000086504.18	novel	1524	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	692.160674988113	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	-1	True	NA	-21	True	AGTAAA	-16	NA	370508	367393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370443
transcript_61251.known	chr16	-	865	6	FSM	ENSG00000086504.18	ENST00000389675.6	865	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	724.456320284391	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACAGATCCCGGGGAG	-2	True	NA	NA	False	NA	NA	NA	370509	367612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370484
transcript_61252.known	chr16	-	1524	6	FSM	ENSG00000086504.18	ENST00000199706.13	1524	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	674.004747757759	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGTGTTGGGATTACA	-4	True	NA	-47	True	NA	NA	NA	370538	366968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370498
transcript_61257.known	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	521.5363721736	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-2	True	NA	-11	True	AGTAAA	-26	NA	370509	367383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
transcript_61262.known	chr16	+	1715	3	FSM	ENSG00000236829.9	ENST00000412293.5	1715	3	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTGAGTTACGAGAGT	NA	False	NA	NA	False	AATGAA	-15	NA	382096	392960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_382478_383289_383430_391766
transcript_61266.known	chr16	-	1467	4	FSM	ENSG00000086504.18	ENST00000469744.1	1467	4	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_3	75.2374020462341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGGAGCGAGTAAAGT	0	True	NA	-54	True	NA	NA	NA	370234	367426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_369221_369930
transcript_61303.known	chr16	+	1167	6	FSM	ENSG00000103202.13	ENST00000448828.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1062.96464663694	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTTTGCACACCCA	3	True	NA	0	True	AGTAAA	-1	NA	397198	400734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
transcript_61315.known	chr16	+	1232	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	972.644944211401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	-2	True	NA	12	True	AGTAAA	-13	NA	396724	400746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
transcript_61322.known	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	939.572608955795	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	2	True	NA	22	True	ATTAAA	-18	NA	397236	400648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
transcript_61324.known	chr16	+	1000	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_1	233.536934980315	2069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	3	True	NA	20	True	AGTAAA	-21	NA	397198	400754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
transcript_61327.known	chr16	+	1652	5	FSM	ENSG00000103202.13	ENST00000460297.1	1652	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	936.60647419287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGCCCAGCACATGG	12	False	NA	7	True	ATTAAA	-3	NA	397207	400633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398207_399124_399378_399481_399626_399740_400218
transcript_61331.known	chr16	+	904	4	FSM	ENSG00000103202.13	ENST00000621774.4	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_2	882.056813488917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	-4	True	NA	19	True	AGTAAA	-20	NA	397191	400753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398989_399124_399626_399740_400218
transcript_61336.known	chr16	+	1551	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	42.3489964461969	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATCGTTTAGGGGTTGT	-1	True	NA	13	True	ATTAAA	-16	NA	401884	412482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_61337.known	chr16	+	766	6	FSM	ENSG00000103202.13	ENST00000382940.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1097.27637357231	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACCCCAAGCCAGC	13	False	NA	-11	True	NA	NA	NA	397208	400506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_397878_397903_398989_399124_399378_399481_399626_399740_400218
transcript_61340.known	chr16	-	2253	1	FSM	ENSG00000277142.1	ENST00000622160.1	2253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTGCTTGTGGT	1942	False	NA	NA	False	NA	NA	NA	527407	525154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_525200_527400
transcript_61346.nnic	chr16	+	4618	14	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.1550965157439	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	-6	True	NA	22	True	AATAAA	-18	NA	527756	554636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_527872_527982_528030_533945_533999_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
transcript_61355.known	chr16	+	2245	3	FSM	ENSG00000161992.6	ENST00000409413.4	2245	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCCGTCTGTGCCTCCTT	-1	True	NA	NA	False	ATTAAA	-17	NA	560393	565529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_560662_563255_564377_564673
transcript_61360.known	chr16	+	2958	11	FSM	ENSG00000007541.17	ENST00000321878.10	2958	11	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_9	31.1576635837798	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	0	True	NA	18	True	AATAAA	-19	NA	569967	584109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582247_582310_582882
transcript_61364.known	chr16	+	2846	10	FSM	ENSG00000007541.17	ENST00000026218.9	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	58.4085229701587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	50	False	NA	18	True	AATAAA	-19	NA	570017	584109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582882
transcript_61379.known	chr16	+	1289	4	FSM	ENSG00000282907.1	ENST00000635107.1	1289	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	102.931476667193	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACTGGGGTGGAGCCC	511	False	NA	NA	False	NA	NA	NA	569460	576257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_569796_574065_574764_575838_575971_576133
transcript_61383.known	chr16	+	2052	4	FSM	ENSG00000007541.17	ENST00000422307.6	2052	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	11.7756811551038	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGCTCTTATCCTTTA	8	True	NA	25	True	TATAAA	-33	NA	569975	577234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133
transcript_61394.known	chr16	+	2112	3	FSM	ENSG00000007541.17	ENST00000470411.2	2112	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	10	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTCTCTTCCTGCTGC	94	False	NA	8	True	TATAAA	-16	NA	570061	577217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838
transcript_61398.known	chr16	+	2071	2	FSM	ENSG00000257108.2	ENST00000540585.1	2071	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	-16	True	NA	NA	False	AATAAA	-16	NA	567004	569495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_567076_567495
transcript_61399.known	chr16	+	2096	2	FSM	ENSG00000257108.2	ENST00000424439.3	2096	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	-16	True	NA	NA	False	AATAAA	-16	NA	567004	569495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_567076_567470
transcript_61402.nic	chr16	+	3319	2	ISM	ENSG00000007541.17	ENST00000422307.6	2052	4	-46	17	-38	0	intron_retention	FALSE	canonical	3	226	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTCTCTTCCTGCTGC	980	False	NA	8	True	TATAAA	-16	NA	569929	577217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_570097_574065
transcript_61403.nic	chr16	+	3529	2	ISM	ENSG00000007541.17	ENST00000422307.6	2052	4	-46	-193	-38	193	intron_retention	FALSE	canonical	3	226	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTATGGTGGTGG	980	False	NA	NA	False	AATACA	-6	NA	569929	577427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_570097_574065
transcript_61404.nic	chr16	+	3698	2	ISM	ENSG00000007541.17	ENST00000422307.6	2052	4	-46	-362	-38	362	intron_retention	FALSE	canonical	3	226	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTTTTCTCCTTCTTG	980	False	NA	NA	False	AAAACA	-33	NA	569929	577596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_570097_574065
transcript_61405.known	chr16	+	1775	2	FSM	ENSG00000007541.17	ENST00000476438.1	1775	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCAGGCTCGGTCCCGGG	1081	False	NA	17	True	AATAAA	-18	NA	581760	584108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_582310_582882
transcript_61406.known	chr16	+	2717	7	FSM	ENSG00000197562.10	ENST00000535977.5	2717	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	63.6727745761265	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	28	False	NA	37	True	AGTAAA	-22	NA	589356	629271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_589548_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
transcript_61408.known	chr16	+	753	7	FSM	ENSG00000197562.10	ENST00000566290.5	753	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.2690224262689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCGTCACCATCAAGAG	7	False	NA	NA	False	NA	NA	NA	589668	627415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_589752_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
transcript_61410.known	chr16	+	2569	7	FSM	ENSG00000197562.10	ENST00000538492.5	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	34.5032204616065	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	-10	True	NA	37	True	AGTAAA	-22	NA	590076	629271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_590120_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
transcript_61417.nnic	chr16	+	2464	5	NIC	ENSG00000197562.10	novel	2569	7	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_2	57.3427196773924	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTTTTGCTGTGTCTG	-30	True	NA	34	True	AGTAAA	-19	NA	590056	629268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_590120_590260_590434_625431_625510_625898_626122_627341
transcript_61421.known	chr16	+	1976	2	FSM	ENSG00000127578.7	ENST00000319070.3	1976	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTTGCTGCTGCT	-2	True	NA	21	True	AATAAA	-21	NA	630984	634117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_631425_632581
transcript_61426.known	chr16	-	797	6	FSM	ENSG00000130731.16	ENST00000301686.13	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_4	221.560826862512	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	29	True	NA	-18	True	AATAAA	-18	NA	636305	634429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_635611_635775_636093
transcript_61432.nic	chr16	-	1065	6	NIC	ENSG00000130731.16	novel	797	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	452.340314365191	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-38	True	NA	-18	True	AATAAA	-18	NA	636372	634429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_634645_634718_634798_634888_635064_635280_635341_635517_635775_636093
transcript_61433.known	chr16	-	755	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	354.823110859482	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACAGCCCCACCCAGTC	95	False	NA	-101	True	NA	NA	NA	636239	634512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
transcript_61438.known	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	320.420036826663	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	3	True	NA	-90	True	NA	NA	NA	636331	634501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
transcript_61440.known	chr16	-	801	5	FSM	ENSG00000130731.16	ENST00000614890.4	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	421.431118333708	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCTGCCCCACCTC	-32	True	NA	-15	True	AATAAA	-21	NA	636366	634426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635611_635775_636093
transcript_61442.known	chr16	-	518	5	FSM	ENSG00000130731.16	ENST00000564039.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	434.121742717409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTGATCTTCCGG	56	False	NA	NA	False	NA	NA	NA	636278	634625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_636093
transcript_61447.known	chr16	-	726	5	FSM	ENSG00000130731.16	ENST00000397666.6	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	366.778117531567	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	32	True	NA	-18	True	AATAAA	-18	NA	636302	634429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_635280_635341_635611_635775_636093
transcript_61452.known	chr16	-	604	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	448.718421977772	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGCTTGCTGGTGTC	-17	True	NA	-26	True	AATAAA	-10	NA	636351	634437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_635280_635341_636093
transcript_61454.known	chr16	-	558	4	FSM	ENSG00000130731.16	ENST00000397665.6	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	447.460240319368	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGACCTTGTGGACGACA	44	False	NA	-114	True	NA	NA	NA	636290	634525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_635611_635775_636093
transcript_61455.known	chr16	-	544	3	FSM	ENSG00000130731.16	ENST00000338401.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	535.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTCTGCCCCACC	-8	True	NA	-17	True	AATAAA	-19	NA	636342	634428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_636093
transcript_61456.known	chr16	-	1710	3	FSM	ENSG00000130731.16	ENST00000448973.6	1710	3	0	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_2	66	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGGCTTGCTGGTGTCTG	24	True	NA	-24	True	AATAAA	-12	NA	636310	634435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888
transcript_61459.known	chr16	+	1050	6	FSM	ENSG00000172366.20	ENST00000491999.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	139.308291210538	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	22	True	NA	23	True	AATAAA	-15	NA	641845	648474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782_647885_648119
transcript_6146.known	chr1	-	3936	22	FSM	ENSG00000134644.16	ENST00000440538.6	3936	22	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_10	125.154181556182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	15	True	NA	5	True	AAAAAG	-5	NA	31065684	30932843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_61463.nic	chr16	+	1338	5	ISM	ENSG00000172366.20	ENST00000491999.5	1050	6	-55	2	-37	-2	intron_retention	FALSE	canonical	3	56	junction_2	144.717612957097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGAGTGTCTTTGA	7239	False	NA	21	True	AATAAA	-13	NA	641790	648472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782
transcript_61464.known	chr16	+	931	5	FSM	ENSG00000172366.20	ENST00000307650.9	931	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	42.7631558704453	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	4	True	NA	23	True	AATAAA	-15	NA	641827	648474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_642044_642119_642250_647416_647545_647782_647885_648119
transcript_61468.known	chr16	+	702	4	FSM	ENSG00000172366.20	ENST00000474840.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	147.459222235241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	-4	True	NA	23	True	AATAAA	-15	NA	641928	648474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_642044_642119_642250_647782_647885_648119
transcript_6147.known	chr1	-	5385	22	FSM	ENSG00000134644.16	ENST00000426105.7	5385	22	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_5	96.1134769609067	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-18	True	NA	-2	True	AATACA	-16	NA	31065717	30931505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_61475.known	chr16	+	727	2	FSM	ENSG00000172366.20	ENST00000619377.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGGGCAGGGGTGGGG	2265	False	NA	NA	False	NA	NA	NA	636816	638620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_636946_638022
transcript_61476.known	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	165.25283658685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	13	True	NA	-14	True	GGGGCT	-5	NA	642450	648437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
transcript_6148.known	chr1	-	4242	22	FSM	ENSG00000134644.16	ENST00000373741.8	4242	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	136.375748105012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTTTAAAAAAAAAAGAAA	7	False	NA	-1	True	NA	NA	NA	31065991	30932849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065688
transcript_6149.known	chr1	-	5375	22	FSM	ENSG00000134644.16	ENST00000373747.7	5375	22	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_14	111.115086096698	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-5	True	NA	-2	True	AATACA	-16	NA	31065704	30931505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_61498.known	chr16	+	2490	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_10	159.400961937708	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	13	True	NA	12	True	NA	NA	NA	668131	674171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_61535.nic	chr16	+	2608	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-55	0	intron_retention	TRUE	canonical	3	809	junction_9	111.054243424999	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	NA	False	NA	28	True	ATTAAA	-19	NA	668049	674125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_6154.known	chr1	-	5360	22	FSM	ENSG00000134644.16	ENST00000257075.9	5360	22	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	98.3179856580416	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	1	True	NA	-2	True	AATACA	-16	NA	31065698	30931505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_61550.nic	chr16	+	2472	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-55	0	intron_retention	FALSE	canonical	3	104	junction_4	285.252816901381	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	NA	False	NA	28	True	ATTAAA	-19	NA	668049	674125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_61554.known	chr16	+	2559	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_5	259.685609761024	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	16	True	NA	15	True	NA	NA	NA	668134	674174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_61582.nic	chr16	+	2627	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-55	0	intron_retention	FALSE	canonical	3	83	junction_8	269.076015920687	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	NA	False	NA	28	True	ATTAAA	-19	NA	668049	674125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670773_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_616.known	chr1	-	842	11	FSM	ENSG00000131591.18	ENST00000434641.5	842	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.1540405625907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCGTATCAGCAATGTC	0	True	NA	NA	False	NA	NA	NA	1116095	1082915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1082988_1083914_1084012_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_6161.nic	chr1	-	3978	22	NIC	ENSG00000134644.16	novel	3936	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_10	112.451249200318	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	269	False	NA	5	True	AAAAAG	-5	NA	31065729	30932843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_617.known	chr1	-	2010	11	FSM	ENSG00000131591.18	ENST00000379325.7	2010	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	26.3901496774838	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	0	True	NA	-16	True	TATAAA	-16	NA	1116095	1081822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_6177.nic	chr1	-	3972	22	NIC	ENSG00000134644.16	novel	5360	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_10	114.27573369118	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	269	False	NA	5	True	AAAAAG	-5	NA	31065729	30932843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_6181.nic	chr1	-	3975	22	NIC	ENSG00000134644.16	novel	3936	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_10	126.743675122956	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	269	False	NA	5	True	AAAAAG	-5	NA	31065729	30932843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_61839.known	chr16	+	1458	8	FSM	ENSG00000103269.14	ENST00000352681.8	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.20883424647321	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	-13	True	NA	15	True	AATAAA	-15	NA	675670	678268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
transcript_61840.known	chr16	+	1566	6	FSM	ENSG00000103269.14	ENST00000450775.2	1566	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.84707681233427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGGGGCTGTCCCGGGC	38	False	NA	14	True	AATAAA	-14	NA	675721	678267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458
transcript_61842.known	chr16	+	1560	7	FSM	ENSG00000103269.14	ENST00000219551.2	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4.3493294502333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	391	False	NA	15	True	AATAAA	-15	NA	676074	678268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
transcript_61844.known	chr16	-	1934	9	FSM	ENSG00000161999.13	ENST00000609261.6	1934	9	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_8	50.3140139523771	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCGGGAGTCGGTG	6	True	NA	-12	True	AGTAAA	-14	NA	684334	681669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065_684156_684233
transcript_61845.known	chr16	-	823	8	FSM	ENSG00000161999.13	ENST00000562111.1	823	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	176.229905498008	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATCACGGCCCAGCAAAA	-6	True	NA	NA	False	NA	NA	NA	684346	682657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065_684156_684233
transcript_61848.known	chr16	-	1015	8	FSM	ENSG00000161999.13	ENST00000562824.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	180.855788755933	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	9769	False	NA	NA	False	CATAAA	-33	NA	684363	682527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684233
transcript_61850.nic	chr16	-	2063	8	NIC	ENSG00000161999.13	novel	1934	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	62	junction_6	170.227938424949	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTCGGGAGTCGGT	-17	True	NA	-13	True	AGTAAA	-13	NA	684357	681670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683909_684156_684233
transcript_61853.known	chr16	-	1998	8	FSM	ENSG00000161999.13	ENST00000568689.5	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	176.745175727252	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTGCCAGTAAAGCCT	-4	True	NA	-41	True	NA	NA	NA	684344	681698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682957_683088_683166_683235_683321_683599_683684_683782_683860_683910_684065_684156_684233
transcript_61858.known	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_4	50.1386965216377	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	-5	True	NA	12	True	NA	NA	NA	680409	682801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_6186.nic	chr1	-	4056	22	NIC	ENSG00000134644.16	novel	5375	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_14	112.968660996521	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	269	False	NA	5	True	AAAAAG	-5	NA	31065729	30932843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_61862.known	chr16	+	1560	7	FSM	ENSG00000103266.11	ENST00000565677.5	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	491.887746905283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGACGTGCTGGTGTGT	86	False	NA	20	True	AATAAA	-15	NA	680223	682746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_680685_681062_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_61879.known	chr16	-	1428	7	FSM	ENSG00000161999.13	ENST00000569441.5	1428	7	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_6	55.3082272360993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGGGGGCTCCGGGTCA	20	True	NA	NA	False	NA	NA	NA	684320	682405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683599_683684_683782_683860_684156_684233
transcript_61891.nic	chr16	+	1736	6	ISM	ENSG00000103266.11	ENST00000219548.9	1340	7	-371	57	-185	-2	intron_retention	FALSE	canonical	3	1250	junction_4	54.5343928177439	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGACGTGCTGGTGT	490	False	NA	18	True	AATAAA	-13	NA	680038	682744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164
transcript_61901.known	chr16	-	729	6	FSM	ENSG00000161999.13	ENST00000569396.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_5	58.7040032706459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCTACGGTCGTAAGGT	9	True	NA	NA	False	NA	NA	NA	684331	683184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_683235_683321_683442_683529_683599_683684_683782_683860_684156_684233
transcript_61917.known	chr16	+	894	4	FSM	ENSG00000103266.11	ENST00000563505.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	1251	junction_1	55.5717754100247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGAAGGTGAGTGTGT	15	True	NA	NA	False	NA	NA	NA	680429	682066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_680685_681151_681351_681437_681604_681792
transcript_61922.known	chr16	-	785	3	FSM	ENSG00000161999.13	ENST00000567901.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_2	89	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCTCCAGCTTACAGC	9829	False	NA	NA	False	NA	NA	NA	684303	683354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_683599_683684_684156_684233
transcript_61923.known	chr16	+	1853	5	FSM	ENSG00000103266.11	ENST00000569248.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	1295	junction_4	35.5272782520699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTGTAATAAAATCCG	4	True	NA	-9	True	NA	NA	NA	680418	682717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_681351_681437_681604_681792_682077_682164_682282_682363
transcript_61926.known	chr16	-	3243	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_8	23.2002155162404	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-13	True	NA	-8	True	AATAAA	-15	NA	690398	684621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_61928.nnic	chr16	-	3243	9	NNC	ENSG00000127580.17	novel	3243	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	13	junction_3	67.819613682179	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	6806	False	NA	-8	True	AATAAA	-15	NA	690443	684621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_684903_684991_685177_685256_685598_685723_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_61934.nic	chr16	-	3365	8	NIC	ENSG00000127580.17	novel	3243	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	166	junction_7	24.6626214737846	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	6806	False	NA	-8	True	AATAAA	-15	NA	690443	684621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_686187_686743_687417_687561_687740_689159
transcript_61938.nic	chr16	-	3377	8	NIC	ENSG00000127580.17	novel	3243	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	166	junction_7	21.5235988190277	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	6806	False	NA	-8	True	AATAAA	-15	NA	690443	684621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_61945.known	chr16	-	3519	6	FSM	ENSG00000127585.12	ENST00000397621.6	3519	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	27.8610839702981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGAGTTGTTTTTAG	-31	True	NA	0	True	ATTAAA	-16	NA	705801	692499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_694424_694633_694698_694991_695077_695414_695924_696772_697420_705511
transcript_61949.known	chr16	-	2257	4	FSM	ENSG00000127585.12	ENST00000562563.1	2257	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	22.1259023670348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAGAGTGAGAGAGAG	9814	False	NA	-20	True	NA	NA	NA	696025	692926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_694424_694633_694698_694991_695077_695414
transcript_61952.known	chr16	-	2531	3	FSM	ENSG00000127585.12	ENST00000562648.2	2531	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAGTTGTTTTTAGGT	1717	False	NA	2	True	ATTAAA	-18	NA	695532	692497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_694424_694633_694698_694991
transcript_61955.known	chr16	+	3322	4	FSM	ENSG00000103260.9	ENST00000568223.7	3322	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	20.2374789822141	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCATGCATCTGTA	-13	True	NA	NA	False	AATAAA	-20	NA	715117	719655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_715394_715583_715985_716932_716993_717070
transcript_61956.known	chr16	-	1585	14	FSM	ENSG00000162004.19	ENST00000345165.10	1585	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	10.6815108742262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTTTATCGTGTCTA	5	True	NA	NA	False	CATAAA	-23	NA	726443	722581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_722790_722921_723023_723094_723162_723856_723937_724105_724206_724321_724510_724680_724807_724910_724990_725077_725146_725236_725294_725412_725581_725793_725881_725965_726086_726307
transcript_61982.known	chr16	-	2095	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	17.7471124411832	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	1	True	NA	-14	True	AATAAA	-19	NA	740997	729764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
transcript_61989.known	chr16	-	2071	10	FSM	ENSG00000162004.19	ENST00000682391.1	2071	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.6354390896262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACAGAGTCTTTATCG	-8	True	NA	NA	False	CATAAA	-17	NA	726456	722587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_722790_722921_723048_723094_723162_723856_723937_724105_724206_724321_725294_725412_725581_725793_725881_725965_726086_726307
transcript_61993.known	chr16	-	1918	10	FSM	ENSG00000103245.14	ENST00000565425.5	1918	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	39.6197980189416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCCCAGCGTTTGTCT	1	True	NA	-58	True	NA	NA	NA	740997	729808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_737185_737330_739642_739739_740919
transcript_62.known	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1611	junction_5	2170.82762097777	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
transcript_62008.known	chr16	+	1512	8	FSM	ENSG00000103253.19	ENST00000389703.8	1512	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.7556419517717	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	1	True	NA	9	True	AATAAA	-14	NA	727105	729715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
transcript_62034.known	chr16	+	1041	7	FSM	ENSG00000103253.19	ENST00000561546.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	60.3123812606776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAGGCTGCTCATTAAG	120	False	NA	NA	False	NA	NA	NA	727245	729185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008
transcript_62064.known	chr16	+	870	5	FSM	ENSG00000103254.10	ENST00000569529.6	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_4	25.3870045495722	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	-19	True	NA	17	True	GATAAA	-17	NA	721145	722590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800_721942_722083_722135_722308
transcript_62073.known	chr16	+	1088	4	FSM	ENSG00000103254.10	ENST00000564000.5	1088	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	24.1154629969146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATCCTGACTCATGTTT	513	False	NA	12	True	GATAAA	-12	NA	721096	722585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800_721942_722083
transcript_62074.known	chr16	+	806	4	FSM	ENSG00000103254.10	ENST00000219535.7	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	79.851250598987	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGGGTTCTATCC	-23	True	NA	0	True	NA	NA	NA	721141	722573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800_721942_722308
transcript_62075.known	chr16	+	800	4	FSM	ENSG00000103254.10	ENST00000566437.1	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	78.9528692040736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTTCTGCCCCCATCC	60	False	NA	-65	True	NA	NA	NA	721224	722508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800_722084_722308
transcript_62081.known	chr16	+	908	3	FSM	ENSG00000103254.10	ENST00000564640.5	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGCTGGAGGACAAGCTG	-19	True	NA	NA	False	NA	NA	NA	721145	722312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800
transcript_62088.nnic	chr16	+	2062	2	Antisense	novelGene_ENSG00000103245.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCGCGCGCAGGTGTCG	9829	False	NA	NA	False	NA	NA	NA	738345	740997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr16_+_738699_739288
transcript_62091.known	chr16	-	3212	10	FSM	ENSG00000103245.14	ENST00000540986.5	3212	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	18.7049871213502	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCTACGAAAACAGCTCC	64	False	NA	-15	True	AATAAA	-18	NA	740934	729765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642
transcript_62092.known	chr16	+	2162	2	FSM	ENSG00000103253.19	ENST00000569604.1	2162	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATTCTGGTGGGGACG	4538	False	NA	3	True	AGTAAA	-16	NA	733054	735525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_733160_733468
transcript_62098.known	chr16	+	3092	22	FSM	ENSG00000127586.17	ENST00000262315.14	3092	22	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_8	90.0398500841411	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	-4	True	NA	29	True	TATAAA	-23	NA	788619	798074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_62116.nic	chr16	+	3595	21	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	-11	0	intron_retention	TRUE	canonical	3	328	junction_7	84.4336869975485	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	6973	False	NA	27	True	TATAAA	-21	NA	788608	798072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_62136.known	chr16	+	4494	19	FSM	ENSG00000127586.17	ENST00000471202.5	4494	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	135.44740676735	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	-23	True	NA	27	True	TATAAA	-21	NA	788634	798072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790006_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_62143.nic	chr16	+	4350	19	NIC	ENSG00000127586.17	novel	4494	19	NA	NA	-11	0	intron_retention	FALSE	canonical	3	336	junction_3	72.1378353151148	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	6973	False	NA	27	True	TATAAA	-21	NA	788608	798072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_62191.known	chr16	-	940	6	FSM	ENSG00000007376.8	ENST00000565377.1	940	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	89.6178553637611	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCGGAGTGGACGCTGGA	-18	True	NA	NA	False	NA	NA	NA	788381	785982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555_787646_788255
transcript_62192.known	chr16	-	835	6	FSM	ENSG00000007376.8	ENST00000567283.5	835	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	97.6278648747375	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCAGCTCGTGCAGGCCT	30	True	NA	NA	False	NA	NA	NA	788333	786148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787343_787478_787555_787745_788255
transcript_62199.known	chr16	-	1835	5	FSM	ENSG00000007376.8	ENST00000567114.5	1835	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	95.5039266208463	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGACTCCAAATAAATGT	8702	False	NA	-48	True	NA	NA	NA	788397	785013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_788255
transcript_62205.known	chr16	-	1918	5	FSM	ENSG00000007376.8	ENST00000565809.5	1918	5	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	104.981843668322	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGGCTCCAAGGATGA	-8	True	NA	-25	True	AATAAA	-7	NA	788371	784990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787353_787478_787555_787745_788255
transcript_62208.known	chr16	-	587	5	FSM	ENSG00000007376.8	ENST00000563560.1	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.456805297071	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCGCTCACGGGTGTGT	8770	False	NA	NA	False	NA	NA	NA	788329	786840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786929_787067_787180_787353_787478_787555_787745_788255
transcript_62217.known	chr16	+	673	4	FSM	ENSG00000127586.17	ENST00000498439.1	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_3	37.7447568102732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	2476	False	NA	29	True	TATAAA	-23	NA	796614	798074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_796862_796960_797093_797693_797752_797838
transcript_62221.known	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	15.3231850475024	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-12	True	NA	-3	True	NA	NA	NA	970984	853633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
transcript_62225.known	chr16	-	1603	10	FSM	ENSG00000103227.19	ENST00000568897.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	12.5324270751942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGACCCAGCCCCTCGGC	-1	True	NA	-28	True	AATAAA	-3	NA	970866	854511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_954352_954667_970787
transcript_62227.known	chr16	-	1658	3	FSM	ENSG00000260807.7	ENST00000655952.1	1658	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACAGGGCCTGGGGGGC	1338	False	NA	NA	False	GGGGCT	-17	NA	980232	976153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024_979111_979600
transcript_62228.known	chr16	-	1140	3	FSM	ENSG00000260807.7	ENST00000669274.1	1140	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACAGGGCCTGGGGGGC	1330	False	NA	NA	False	GGGGCT	-17	NA	980240	976153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024_979111_980126
transcript_62229.known	chr16	-	813	3	FSM	ENSG00000260807.7	ENST00000565069.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGGACCTCCCAGAGAG	-5	True	NA	NA	False	NA	NA	NA	981298	976520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024_979111_981144
transcript_62230.known	chr16	-	3222	2	FSM	ENSG00000260807.7	ENST00000562570.1	3222	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTCTCCCAAGTATT	657	False	NA	0	True	AATGAA	-22	NA	980913	975760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024
transcript_62233.nnic	chr16	+	2699	2	FSM	ENSG00000162009.9	ENST00000689027.1	2689	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	4	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTCCCCGAGCAAAT	96	False	NA	9	True	AATAAA	-18	NA	1072736	1081454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1072823_1078841
transcript_62236.known	chr16	+	3109	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	934.562912133096	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-24	True	NA	20	True	ATTAAA	-15	NA	1309634	1327018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_62239.known	chr16	+	2832	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	786.541303570399	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-12	True	NA	20	True	ATTAAA	-15	NA	1309152	1327018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_62240.known	chr16	+	3253	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	794.942083844268	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	NA	False	NA	20	True	ATTAAA	-15	NA	1308879	1327018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_62242.known	chr16	+	2850	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	199.951382979852	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	-23	True	NA	19	True	ATTAAA	-14	NA	1309635	1327017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_62252.known	chr16	+	1771	4	FSM	ENSG00000103275.21	ENST00000473256.6	1771	4	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	120.66850827324	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	-23	True	NA	NA	False	NA	NA	NA	1309635	1317125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653
transcript_62253.known	chr16	+	735	3	FSM	ENSG00000103275.21	ENST00000562482.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	140	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGTGCTTGGCCAGGG	42	False	NA	NA	False	NA	NA	NA	1309757	1314934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1314019_1314097_1314292
transcript_62255.known	chr16	+	2642	1	FSM	ENSG00000103275.21	ENST00000566159.1	2642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAATGAAGTCGAGAT	517	False	NA	NA	False	AATAAA	-1	NA	1314548	1317190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1314500_1317200
transcript_62256.known	chr16	+	4583	34	FSM	ENSG00000007516.14	ENST00000397488.6	4583	34	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	8.73169080089442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTCTGCCGTTTCTTG	1	True	NA	10	True	AATATA	-17	NA	1333642	1349438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339112_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
transcript_62259.known	chr16	+	4531	34	FSM	ENSG00000007516.14	ENST00000426824.8	4531	34	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	8.15258526264193	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGCCGTTTCTTGA	3	True	NA	11	True	AATATA	-18	NA	1333644	1349439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339163_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
transcript_62263.known	chr16	+	3663	34	FSM	ENSG00000007516.14	ENST00000562208.5	3663	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.00668051212913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCTGTCTGGTGTGTG	3	True	NA	NA	False	NA	NA	NA	1333644	1348640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339163_1339245_1339564_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
transcript_62268.known	chr16	-	1210	6	FSM	ENSG00000007520.4	ENST00000007390.3	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_5	78.0138449251157	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	-32	True	NA	-6	True	AATGAA	-16	NA	1351878	1349239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1349609_1349888_1349953_1350057_1350235_1350806_1351001_1351378_1351599_1351692
transcript_62269.nic	chr16	-	1817	5	NIC	ENSG00000007520.4	novel	1210	6	NA	NA	-35	0	intron_retention	FALSE	canonical	3	584	junction_4	79.2417188102328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	490	False	NA	-6	True	AATGAA	-16	NA	1351913	1349239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1349609_1349888_1349953_1350057_1351001_1351378_1351599_1351692
transcript_62271.nic	chr16	-	1181	5	NIC	ENSG00000007520.4	novel	1210	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	250.449096624444	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	490	False	NA	-6	True	AATGAA	-16	NA	1351913	1349239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1349609_1350057_1350235_1350806_1351001_1351378_1351599_1351692
transcript_62274.known	chr16	+	4678	34	FSM	ENSG00000007516.14	ENST00000324385.9	4678	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.99505016419486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTCTGCCGTTTCTTG	862	False	NA	10	True	AATATA	-17	NA	1334503	1349438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1334757_1338539_1338681_1338901_1338990_1339163_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
transcript_62279.known	chr16	-	5250	15	FSM	ENSG00000059145.19	ENST00000389221.9	5250	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	25.6928482068375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTGCTTCTCTGAG	3	True	NA	-17	True	ATTAAA	-14	NA	1414704	1363204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1385207_1385386_1390631_1390695_1392890_1392977_1394130_1394216_1397177_1397296_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_62280.known	chr16	-	2484	15	FSM	ENSG00000059145.19	ENST00000508903.7	2484	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	24.4890646149314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTTTTTTTTAATAT	16	True	NA	NA	False	TATAAA	-15	NA	1414691	1365807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1385207_1385386_1390631_1390695_1392890_1392977_1394130_1394216_1397177_1397296_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_62284.known	chr16	+	1975	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	27.9291961932312	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGTAGCACAAAATATA	-16	True	NA	5	True	AATAAA	-20	NA	1351930	1364113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_62291.known	chr16	+	2185	10	FSM	ENSG00000090581.11	ENST00000683366.1	2185	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	117.155273140783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	-7	True	NA	NA	False	GATAAA	-31	NA	1351939	1364387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_62293.known	chr16	+	2313	10	FSM	ENSG00000090581.11	ENST00000527168.6	2313	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	19.5681777446678	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	-1	True	NA	NA	False	GATAAA	-31	NA	1351945	1364387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_62310.nnic	chr16	-	1817	7	NNC	ENSG00000059145.19	novel	4320	6	NA	NA	-29	124	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	33.4448135823113	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTACTTATGAAATGAGT	NA	False	NA	-2	True	AATATA	-21	NA	1379712	1365683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1366396_1367091_1367350_1367655_1367859_1367971_1368115_1370129_1370358_1371518_1371612_1379532
transcript_62317.known	chr16	-	2180	6	FSM	ENSG00000059145.19	ENST00000397464.5	2180	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	24.2123935206745	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGTTTTCTGATTAC	4	True	NA	NA	False	NA	NA	NA	1379683	1364998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
transcript_62327.nnic	chr16	-	2305	6	NNC	ENSG00000059145.19	novel	2184	6	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	27.9599713876821	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	-15	False	NA	NA	False	NA	NA	NA	1379702	1364994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371564_1379532
transcript_62328.nic	chr16	-	2363	6	NIC	ENSG00000059145.19	novel	2184	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	16.6084315936214	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	NA	False	NA	NA	False	NA	NA	NA	1379712	1364994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
transcript_62329.nic	chr16	-	2294	6	NIC	ENSG00000059145.19	novel	2184	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	26.8208873827843	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	NA	False	NA	NA	False	NA	NA	NA	1379704	1364994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379593
transcript_62336.nic	chr16	-	2144	6	NIC	ENSG00000059145.19	novel	2184	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	30.6620286347789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	NA	False	NA	NA	False	NA	NA	NA	1379704	1364994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379593
transcript_62345.nic	chr16	-	1674	6	NIC	ENSG00000059145.19	novel	4320	6	NA	NA	-29	124	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	16.6084315936214	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTACTTATGAAATGAGT	NA	False	NA	-2	True	AATATA	-21	NA	1379712	1365683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
transcript_62350.known	chr16	-	1431	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5463442476886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAGTAGAGGATTTTGT	5986	False	NA	NA	False	AATAAA	-17	NA	1414751	1398304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_62359.known	chr16	+	386	3	FSM	ENSG00000090581.11	ENST00000527137.2	386	3	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCCTTTCCTTTCCGA	4	True	NA	NA	False	ATTAAA	-16	NA	1351950	1352499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352160_1352238
transcript_62361.nic	chr16	+	945	2	ISM	ENSG00000090581.11	ENST00000527137.2	386	3	-20	-460	0	460	intron_retention	FALSE	canonical	3	348	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGAATTTTTTTTTTTT	-16	True	NA	NA	False	ATTAAA	-16	NA	1351930	1352959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_1352018_1352101
transcript_62363.known	chr16	-	917	2	FSM	ENSG00000174109.5	ENST00000442039.3	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-10	True	NA	-7	True	AATAAA	-22	NA	1420747	1419751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1420613_1420691
transcript_62364.known	chr16	-	1005	1	FSM	ENSG00000174109.5	ENST00000563974.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-19	True	NA	-7	True	AATAAA	-22	NA	1420756	1419751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1419800_1420800
transcript_62370.nnic	chr16	-	4143	25	NIC	ENSG00000103249.18	novel	4168	25	NA	NA	-324	0	intron_retention	FALSE	canonical	0	0	junction_2	65.2702581366293	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTTGCCAGCGTC	NA	False	NA	-9	True	AATAAA	-12	NA	1475408	1445343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1446718_1447005_1447087_1447387_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
transcript_62381.known	chr16	-	3717	24	FSM	ENSG00000103249.18	ENST00000262318.12	3717	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	88.4242864960981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTTGCCAGCGTC	-15	True	NA	-9	True	AATAAA	-12	NA	1475057	1445343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1446718_1447005_1447084_1447387_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1474833
transcript_624.nic	chr1	-	1907	11	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-15	0	intron_retention	FALSE	canonical	1	3	junction_10	28.8714391743813	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-15	True	NA	-16	True	TATAAA	-16	NA	1116110	1081822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1115021_1115076_1116059
transcript_62420.nic	chr16	-	1946	14	ISM	ENSG00000103249.18	ENST00000382745.9	4168	25	-19	8240	10	2317	5prime_fragment	FALSE	canonical	3	293	junction_6	13.0288709906093	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGATGTAGAGCCGG	-5	True	NA	NA	False	ACTAAA	-16	NA	1475047	1453174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
transcript_62433.known	chr16	-	4168	25	FSM	ENSG00000103249.18	ENST00000382745.9	4168	25	0	0	0	0	multi-exon	FALSE	canonical	2	229	junction_2	25.0998007960223	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCTGCTTCTTGCCTTT	14	True	NA	-2	True	AATAAA	-19	NA	1475028	1444934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
transcript_62435.known	chr16	-	5232	31	FSM	ENSG00000187535.14	ENST00000426508.7	5232	31	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_30	33.4385838349786	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGCCCTGTCCCATCC	-38	True	NA	-3	True	AATAAA	-19	NA	1612072	1510426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1511151_1518215_1518358_1519880_1520048_1520130_1520344_1520601_1520809_1523517_1523701_1523827_1523957_1524551_1524696_1524783_1524917_1525230_1525327_1525886_1526078_1526618_1526797_1557934_1558135_1561984_1562117_1563996_1564163_1566160_1566292_1568216_1568335_1571406_1571535_1580758_1580851_1583313_1583387_1584216_1584421_1586129_1586276_1587197_1587305_1587932_1588025_1589604_1589781_1592175_1592319_1592466_1592589_1602369_1602592_1607119_1607298_1610663_1610854_1611967
transcript_62477.nic	chr16	+	3795	21	NIC	ENSG00000100726.15	novel	3314	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	92.3581479892272	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	-26	True	NA	NA	False	AATAAA	-15	NA	1493346	1510454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506483_1507052_1507305_1507371_1507600_1507717_1509829
transcript_62478.known	chr16	+	3314	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	77.7718458055356	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	-13	True	NA	NA	False	AATAAA	-15	NA	1493359	1510454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_62485.nic	chr16	+	3303	21	NIC	ENSG00000100726.15	novel	3314	21	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	89.9207428794936	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	4452	False	NA	NA	False	AATAAA	-15	NA	1493335	1510454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_1493606_1494280_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_62565.known	chr16	+	1327	4	FSM	ENSG00000100726.15	ENST00000568240.1	1327	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	8.01387685344754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTTGGTGGCCGGT	NA	False	NA	NA	False	AATAAA	-18	NA	1506533	1510457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1507052_1507305_1507371_1507600_1507717_1509829
transcript_62570.known	chr16	+	3185	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	435.157167009806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	-7	True	NA	88	True	NA	NA	NA	1678276	1701490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_62573.known	chr16	+	593	6	FSM	ENSG00000206053.13	ENST00000566742.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	385.052412016858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACACCTGTCCAATT	6	True	NA	NA	False	NA	NA	NA	1678289	1700225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810_1698844_1700073
transcript_62574.known	chr16	+	3695	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_4	50.4430371805664	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	-5	True	NA	25	True	AATAAA	-32	NA	1678278	1702086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_62578.known	chr16	+	1065	4	FSM	ENSG00000206053.13	ENST00000561516.5	1065	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	431.008893953091	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGCCCTGACCCTCT	-5	True	NA	44	True	NA	NA	NA	1678278	1699599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1685438_1685588_1697811_1697861_1698810
transcript_62581.known	chr16	+	911	4	FSM	ENSG00000206053.13	ENST00000569256.5	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	416.240582142374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCCATTCTGGAGA	7445	False	NA	NA	False	NA	NA	NA	1678255	1699428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1691842_1691986_1697811_1697861_1698810
transcript_62583.known	chr16	+	451	2	FSM	ENSG00000007545.16	ENST00000468839.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTCTGTTTGATGGTGG	NA	False	NA	NA	False	NA	NA	NA	1670466	1673988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1670810_1673880
transcript_626.nic	chr1	-	2288	10	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	12	junction_1	21.7380590181493	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-12	True	NA	-16	True	TATAAA	-16	NA	1116107	1081822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1082988_1083914_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_62600.known	chr16	+	5686	32	FSM	ENSG00000138834.15	ENST00000610761.2	5686	32	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	43.2440741370522	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGGACTTTATTATAAAAA	-6	True	NA	51	True	NA	NA	NA	1706194	1770351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743331_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
transcript_62605.known	chr16	+	5661	32	FSM	ENSG00000138834.15	ENST00000250894.8	5661	32	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	41.4148073073872	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTCCTGGGCCCA	-18	True	NA	17	True	AATAAA	-16	NA	1706182	1770317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743334_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
transcript_62615.nic	chr16	+	3725	15	ISM	ENSG00000138834.15	ENST00000250894.8	5661	32	57689	0	-50	0	3prime_fragment	FALSE	canonical	2	85	junction_9	18.8361625711864	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTCCTGGGCCCA	141	False	NA	17	True	AATAAA	-16	NA	1763871	1770317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
transcript_62624.nic	chr16	+	1282	4	ISM	ENSG00000138834.15	ENST00000564098.5	4436	5	-86	16996	-11	495	5prime_fragment	FALSE	canonical	3	113	junction_3	4.02768199119819	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTTAAAAATTAGCTAAG	6700	False	NA	NA	False	NA	NA	NA	1706154	1730073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486
transcript_62625.known	chr16	-	920	4	FSM	ENSG00000103024.8	ENST00000563498.1	920	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_3	19.258475767539	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTTGGGCCCAGGAACA	1909	False	1771572	-30	True	AATAAA	-16	NA	1771561	1770343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279
transcript_62632.known	chr16	+	5685	33	FSM	ENSG00000138834.15	ENST00000673691.1	5685	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.7988443867741	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTCCTGGGCCCA	-18	True	NA	17	True	AATAAA	-16	NA	1706182	1770317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1740694_1740719_1743334_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
transcript_62633.known	chr16	-	1014	3	FSM	ENSG00000103024.8	ENST00000561637.5	1014	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	13.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGGAACAGGCAGCTAC	-8	True	NA	-21	True	AATAAA	-25	NA	1771538	1770334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1770767_1770880_1770994_1771069
transcript_62634.known	chr16	-	913	4	FSM	ENSG00000103024.8	ENST00000566600.1	913	4	0	0	0	0	multi-exon	TRUE	canonical	3	386	junction_3	32.3419232575925	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTTTTTATAATAAAGT	1913	False	1771572	-63	True	NA	NA	NA	1771557	1770376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771411_1771488
transcript_62637.known	chr16	+	5613	7	FSM	ENSG00000197774.14	ENST00000570069.5	5613	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	9.95685135416256	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGTATGCGTTTGT	488	False	NA	NA	False	NA	NA	NA	1773325	1780627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1773475_1773704_1773842_1774259_1774353_1775040_1775409_1775568_1775685_1775796_1775987_1776067
transcript_62638.known	chr16	+	1349	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	113.831259131908	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	-5	True	NA	18	True	ATTAAA	-25	NA	1782959	1789186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_62642.nic	chr16	-	2212	7	NIC	ENSG00000162032.16	novel	1535	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	144.54612873866	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-5	True	NA	-2	True	AATAAA	-25	NA	1782512	1776711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1781765
transcript_62645.known	chr16	-	1535	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_6	78.0628308195107	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-18	True	NA	-2	True	AATAAA	-25	NA	1782571	1776711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
transcript_62646.known	chr16	+	1173	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	168.872259415216	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	-33	True	NA	13	True	ATTAAA	-20	NA	1782931	1789181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_62647.known	chr16	+	995	6	FSM	ENSG00000095906.17	ENST00000565603.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	113.73899946808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGAAACAGAGGCCT	31	True	NA	NA	False	NA	NA	NA	1782995	1788767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1783037_1786536_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_62650.known	chr16	-	2316	6	FSM	ENSG00000162032.16	ENST00000564709.5	2316	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	157.923272509152	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGGCGTGAGCTGAAAC	2	True	NA	-4	True	AATAAA	-23	NA	1782505	1776713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1781765
transcript_62652.known	chr16	-	1628	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_5	80.3328077437855	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-4	True	NA	-8	True	AATAAA	-19	NA	1782557	1776717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
transcript_62659.known	chr16	+	2196	5	FSM	ENSG00000095906.17	ENST00000567700.5	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	41.2128620699898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGATGTTTCTAGAGT	-33	True	NA	15	True	ATTAAA	-22	NA	1782931	1789183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1783037_1786536_1787832_1787940_1788052_1788137_1788208_1788568
transcript_62662.known	chr16	-	1746	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	88.0379889593123	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACCCACATGGCGTGA	NA	False	NA	-12	True	AATAAA	-15	NA	1782594	1776721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
transcript_62672.known	chr16	-	1781	4	FSM	ENSG00000162032.16	ENST00000569380.5	1781	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	101.6267681273	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	1	True	NA	-8	True	AATAAA	-19	NA	1782552	1776717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1778613_1781357_1781496_1782501
transcript_62674.known	chr16	-	1040	3	FSM	ENSG00000074071.15	ENST00000177742.7	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	1202	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGTGGTGTCTTTGCGCT	-12	True	NA	-4	True	AATAAA	-19	NA	1773150	1771889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1772535_1772603_1772647_1772798
transcript_62676.known	chr16	-	998	3	FSM	ENSG00000074071.15	ENST00000397375.7	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_2	40	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGGTCGTGGTGTCTTT	4	True	NA	-9	True	AATAAA	-14	NA	1773134	1771894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1772514_1772603_1772647_1772798
transcript_62679.nic	chr16	-	1449	2	NIC	ENSG00000074071.15	novel	1040	3	NA	NA	-351	-5	intron_retention	FALSE	canonical	3	2643	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTACCCAGGGTCGTGGT	9052	False	NA	-15	True	AATAAA	-8	NA	1773501	1771900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1772647_1772798
transcript_62680.known	chr16	-	520	2	FSM	ENSG00000162032.16	ENST00000568416.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTACGGGGCTGGGCACT	-14	True	NA	NA	False	NA	NA	NA	1782567	1781041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1781496_1782501
transcript_62681.known	chr16	-	713	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	2723	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGTCGTGGTGTCTT	33	True	NA	-10	True	AATAAA	-13	NA	1772698	1771895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1772514_1772603
transcript_62682.known	chr16	-	1867	14	FSM	ENSG00000162039.17	ENST00000325962.9	1867	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.66765275577787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTTGAATGATTTATTT	-20	True	NA	NA	False	AATAAA	-17	NA	1872164	1833985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1834367_1837783_1837871_1839254_1839439_1841819_1841974_1844861_1844964_1853038_1853135_1853218_1853272_1854099_1854201_1857734_1857931_1860402_1860476_1861984_1862117_1865777_1865836_1868106_1868185_1871992
transcript_62683.known	chr16	-	1257	10	FSM	ENSG00000063854.13	ENST00000397353.6	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	77.9387223685662	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTGCAGACTGTTT	-24	True	NA	-5	True	NA	NA	NA	1826841	1809102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826506_1826603_1826711
transcript_62685.known	chr16	-	2619	9	FSM	ENSG00000063854.13	ENST00000397356.8	2619	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	28.3978432279636	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCTCATTTGTCAAC	-8	True	NA	NA	False	NA	NA	NA	1826825	1807628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826711
transcript_62687.nic	chr16	-	1198	9	NIC	ENSG00000063854.13	novel	1291	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	76.9155380921176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTATTTATTCCCATA	-18	True	NA	-26	True	NA	NA	NA	1826835	1809123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1809447_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826711
transcript_62690.known	chr16	-	1276	8	FSM	ENSG00000063854.13	ENST00000455446.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	71.0963703542665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGTGGCCGCGTCTTC	-17	True	NA	NA	False	NA	NA	NA	1826834	1808871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819896_1820015_1822299_1822365_1822864_1823038_1826711
transcript_62692.nic	chr16	-	823	4	ISM	ENSG00000063854.13	ENST00000397353.6	1257	10	6	12832	-1	-423	5prime_fragment	FALSE	canonical	3	47	junction_3	99.159803684087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGCCAGCCGGGCACG	-18	True	NA	NA	False	TTTAAA	-30	NA	1826835	1821934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_1822365_1822864_1823038_1826506_1826603_1826711
transcript_62693.known	chr16	-	1147	3	FSM	ENSG00000063854.13	ENST00000565097.1	1147	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	48	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCTCTTCAAAGCTAGA	-15	True	NA	NA	False	NA	NA	NA	1826832	1821511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1822365_1822864_1823038_1826711
transcript_62694.known	chr16	+	1974	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAGGGTAATTTTTTT	-5	True	NA	27	True	AATAAA	-20	NA	1826940	1828914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1826900_1828900
transcript_62695.known	chr16	-	1792	13	FSM	ENSG00000162039.17	ENST00000397344.7	1792	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.88407275403087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATTTGAATGATTTAT	-34	True	NA	NA	False	AATAAA	-15	NA	1872178	1833987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1834367_1839254_1839439_1841819_1841974_1844861_1844964_1853038_1853135_1853218_1853272_1854099_1854201_1857734_1857931_1860402_1860476_1861984_1862117_1865777_1865836_1868106_1868185_1871992
transcript_62696.known	chr16	-	1363	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	-94	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	142.037847069012	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGTCTTTTTTTTTG	9625	False	NA	-10	True	AATGAA	-9	NA	1943293	1938233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1939144_1940777_1940812_1940814_1940893_1941256_1941406_1943101
transcript_62697.known	chr16	-	550	5	FSM	ENSG00000198736.13	ENST00000564908.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	156.814380718096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGACGGCCACCACAC	-2	True	NA	NA	False	AAGAAA	-41	NA	1943199	1939094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1939144_1940777_1940893_1941028_1941168_1941256_1941406_1943101
transcript_62698.known	chr16	-	1277	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	18.1842422626478	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTGTTTTG	-2	True	NA	-5	True	AATGAA	-14	NA	1943199	1938228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
transcript_62701.known	chr16	+	675	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	2364	junction_3	225.700391374642	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	-4	True	NA	26	True	TATAAA	-14	NA	1959537	1961975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
transcript_62702.known	chr16	+	830	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	2740	junction_1	81.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1	True	NA	26	True	TATAAA	-14	NA	1959542	1961975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961292_1961496
transcript_62703.known	chr16	+	628	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	1195.47823996182	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	10	True	NA	26	True	TATAAA	-14	NA	1959551	1961975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
transcript_62704.known	chr16	+	495	4	FSM	ENSG00000140990.15	ENST00000570172.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	1311.01597583282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGGCAGAGGATGCT	16	True	NA	NA	False	NA	NA	NA	1959557	1961840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961292_1961496_1961612_1961796
transcript_62706.known	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_4	11939.2473241267	10102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-5	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
transcript_62707.known	chr16	-	993	5	FSM	ENSG00000140988.16	ENST00000529806.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_4	23830.07893792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAATTAAGCGTGTT	9	True	NA	-45	True	AAGAAA	-3	NA	1964812	1962078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962266_1962496_1962657_1962735_1962910_1963148_1963257_1964448
transcript_62708.known	chr16	-	1243	4	FSM	ENSG00000140988.16	ENST00000527871.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_2	14477.7429410342	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	190	False	NA	-27	True	AATAAA	-15	NA	1964631	1962060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962496_1963257_1964275_1964366_1964448
transcript_62709.known	chr16	-	1186	5	FSM	ENSG00000140988.16	ENST00000533161.5	1186	5	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_3	13344.8443111001	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	8	True	NA	-27	True	AATAAA	-15	NA	1964813	1962060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962496_1962910_1963148_1963257_1964275_1964366_1964448
transcript_62710.known	chr16	-	1114	5	FSM	ENSG00000140988.16	ENST00000533872.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_3	13682.2240767903	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	240	False	NA	-27	True	AATAAA	-15	NA	1964581	1962060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1963257_1964275_1964366_1964448
transcript_62711.known	chr16	+	275	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	60	0	60	0	multi-exon	FALSE	canonical	3	570	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCGGGTGTTCTTGGG	7	True	NA	20	True	AATAAA	-20	NA	1964958	1965509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1965130_1965405
transcript_62712.known	chr16	+	471	1	FSM	ENSG00000255198.5	ENST00000564014.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCATGCGGGTGTTC	13	True	NA	15	True	AATAAA	-15	NA	1965033	1965504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1965000_1965500
transcript_62713.known	chr16	-	242	1	FSM	ENSG00000277602.1	ENST00000618631.1	242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTATTGAGCACCTT	9572	False	NA	NA	False	AATAAA	-19	NA	1971896	1971654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1971700_1971900
transcript_62726.known	chr16	+	6783	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_10	35.9624394633372	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	-21	True	NA	NA	False	NA	NA	NA	1972052	1982929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_62756.known	chr16	+	2594	21	FSM	ENSG00000183751.16	ENST00000569628.5	2594	21	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_9	34.6128227684481	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCCGGCCTCTCTCCA	12	True	NA	15	True	CATAAA	-15	NA	1972085	1978684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1972206_1974055_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_62785.known	chr16	+	1047	8	FSM	ENSG00000183751.16	ENST00000567615.1	1047	8	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	20.8942917700368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGGAAAACCCATAAAGG	2590	False	NA	-17	True	NA	NA	NA	1977025	1978717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_62789.known	chr16	+	2026	4	FSM	ENSG00000127561.16	ENST00000248121.7	2026	4	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_2	134.120178281354	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGACGCTCCTGGAATCA	-13	True	NA	36	True	AATAAA	-24	NA	1989969	1994275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1990202_1991973_1992212_1992635_1992779_1992862
transcript_62791.known	chr16	+	2365	3	FSM	ENSG00000127554.13	ENST00000248114.7	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	13	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	-10	True	NA	10	True	AATAAA	-20	NA	1984192	1987749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1984477_1984746_1984944_1985865
transcript_62795.known	chr16	+	482	2	FSM	ENSG00000127554.13	ENST00000561710.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCGGGGAACGTAGAGA	55	False	NA	NA	False	GGGGCT	-13	NA	1984257	1985009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1984477_1984746
transcript_62798.known	chr16	-	545	2	FSM	ENSG00000261790.2	ENST00000565041.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCAGCTGCAGCTCCTTG	1808	False	NA	NA	False	NA	NA	NA	1990357	1986265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1986772_1990318
transcript_628.known	chr1	-	1832	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_9	13.7822573362984	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	6	True	NA	-16	True	TATAAA	-16	NA	1116089	1081822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_62802.known	chr16	-	3368	12	FSM	ENSG00000167962.15	ENST00000652647.1	3362	12	-7	1	0	0	multi-exon	FALSE	canonical	3	136	junction_4	23.1216688465157	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGCTT	-5	True	NA	-17	True	AATAAA	-21	NA	2009821	1997654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_62803.nnic	chr16	-	3390	12	NNC	ENSG00000167962.15	novel	3362	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	17	junction_8	55.1301990108435	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	4	True	NA	-16	True	AATAAA	-22	NA	2009812	1997653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002454_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_62804.nic	chr16	-	3342	12	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	75	junction_4	38.0273933451676	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	4	True	NA	-16	True	AATAAA	-22	NA	2009812	1997653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_62805.nnic	chr16	-	3372	12	NNC	ENSG00000167962.15	novel	3362	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	17	junction_8	61.6079312270964	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	4	True	NA	-16	True	AATAAA	-22	NA	2009812	1997653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001582_2001701_2002205_2002454_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_62810.known	chr16	-	3382	11	FSM	ENSG00000167962.15	ENST00000562988.5	3382	11	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_6	62.7101267739111	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	0	True	NA	-16	True	AATAAA	-22	NA	2009764	1997653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001591_2001701_2002205_2002733_2002990_2003121_2003615_2003729_2009523
transcript_62814.nic	chr16	-	3476	11	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	136	junction_3	23.6211769393483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	4	True	NA	-16	True	AATAAA	-22	NA	2009812	1997653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_62820.nic	chr16	-	3610	10	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	171	junction_6	16.6065582761082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	4	True	NA	-16	True	AATAAA	-22	NA	2009812	1997653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1998853_1998964_1999122_1999495_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_62833.known	chr16	+	751	2	FSM	ENSG00000183971.10	ENST00000566435.4	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCGTCTGCTTGTGTA	-2	True	NA	31	True	AATAAA	-32	NA	2019784	2020755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2020313_2020532
transcript_62834.known	chr16	+	2160	7	FSM	ENSG00000065054.14	ENST00000424542.7	2160	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	13.0820063021269	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACACGCCTCTGTCTTTT	7	True	NA	NA	False	GATAAA	-17	NA	2026901	2039026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037825
transcript_6284.known	chr1	-	4631	18	FSM	ENSG00000134644.16	ENST00000424085.6	4631	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	151.799061318906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	4	True	NA	-2	True	AATACA	-16	NA	31065695	30931505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_31028795_31028865_31059203_31059578_31065615
transcript_62840.known	chr16	-	1030	6	FSM	ENSG00000065057.9	ENST00000651570.2	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_3	20.1553962997506	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-4	True	NA	-7	True	AATAAA	-18	NA	2047834	2039819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
transcript_62841.nnic	chr16	-	1047	6	NNC	ENSG00000065057.9	novel	1030	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	241.531447227892	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	4	True	NA	-7	True	AATAAA	-18	NA	2047826	2039819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046392_2047708
transcript_62842.known	chr16	-	837	6	FSM	ENSG00000065057.9	ENST00000568513.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	253.299822344983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	36	False	NA	-8	True	AATAAA	-17	NA	2047794	2039820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046279_2046367_2047708
transcript_62845.known	chr16	-	802	5	FSM	ENSG00000065057.9	ENST00000651583.1	802	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	272.87726178632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	52	False	NA	-8	True	AATAAA	-17	NA	2047778	2039820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2046127_2046367_2047708
transcript_62853.known	chr16	+	5538	41	FSM	ENSG00000103197.18	ENST00000350773.9	5538	41	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_25	59.240948675726	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	3	True	NA	47	True	NA	NA	NA	2048019	2088718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_62861.known	chr16	+	5388	40	FSM	ENSG00000103197.18	ENST00000642797.1	5388	40	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_25	55.0987637543564	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	24	False	NA	47	True	NA	NA	NA	2048040	2088718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_62865.known	chr16	+	5437	40	FSM	ENSG00000103197.18	ENST00000401874.7	5437	40	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_25	52.756421160855	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	6	True	NA	47	True	NA	NA	NA	2047988	2088718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_62885.nic	chr16	+	3932	23	NIC	ENSG00000103197.18	novel	5453	39	NA	NA	-11	280	intron_retention	FALSE	canonical	2	8	junction_11	48.5686019039985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCGGAAGCCTTTCCT	542	False	NA	NA	False	NA	NA	NA	2047955	2075550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2060952_2061040_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199
transcript_62891.nic	chr16	+	3565	22	ISM	ENSG00000103197.18	ENST00000642936.1	5507	41	-30	13446	-11	0	5prime_fragment	FALSE	canonical	3	145	junction_10	16.4672422714676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTTTCGGAG	542	False	NA	NA	False	AAAAAG	-36	NA	2047955	2075270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199
transcript_62892.nic	chr16	+	3845	22	ISM	ENSG00000103197.18	ENST00000642936.1	5507	41	-30	13166	-11	280	5prime_fragment	FALSE	canonical	3	145	junction_10	16.4672422714676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCGGAAGCCTTTCCT	542	False	NA	NA	False	NA	NA	NA	2047955	2075550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199
transcript_62908.known	chr16	+	2433	15	FSM	ENSG00000103197.18	ENST00000644222.1	2433	15	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	14.5281219202832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAAGGCAGGCGGATCA	-9	True	NA	NA	False	AAAAAG	-44	NA	2048007	2065174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271
transcript_62910.known	chr16	+	3604	14	FSM	ENSG00000103197.18	ENST00000644665.1	3604	14	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	14.6804220954102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGCGTGGT	-5	True	NA	NA	False	AATACA	-1	NA	2047977	2065258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2062009_2062496_2062601_2062971_2063054_2064271
transcript_62913.known	chr16	+	4117	13	FSM	ENSG00000103197.18	ENST00000643149.1	4117	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_9	15.2011969557956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCTGTCTCTACTAAAA	2	True	NA	NA	False	NA	NA	NA	2047984	2064935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2062009_2062496_2062601_2062971_2063054_2064271
transcript_62917.nic	chr16	+	1111	6	ISM	ENSG00000103197.18	ENST00000642812.1	2320	15	-82	9211	-11	0	5prime_fragment	FALSE	canonical	3	146	junction_5	9.60416576283438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	542	False	NA	NA	False	NA	NA	NA	2047955	2055892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401
transcript_62918.nic	chr16	+	2089	5	ISM	ENSG00000103197.18	ENST00000642812.1	2320	15	-82	9194	-11	17	intron_retention	FALSE	canonical	3	157	junction_4	7.58287544405155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTACGTAGCTATCTT	542	False	NA	NA	False	NA	NA	NA	2047955	2055909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295
transcript_62919.nic	chr16	+	1954	5	ISM	ENSG00000103197.18	ENST00000643149.1	4117	13	-29	9043	-11	0	5prime_fragment	FALSE	canonical	3	146	junction_4	10.6389614154766	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	542	False	NA	NA	False	NA	NA	NA	2047955	2055892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2054441_2055401
transcript_62923.known	chr16	+	2793	4	FSM	ENSG00000103197.18	ENST00000461648.3	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	7.78888096369861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGCTTGAAACCGGAA	2	True	NA	NA	False	NA	NA	NA	2047984	2055799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341
transcript_62928.known	chr16	+	600	3	FSM	ENSG00000259933.6	ENST00000570072.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTTCAGGAG	7	True	NA	NA	False	GATAAA	-36	NA	2091435	2095017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2091615_2092888_2093013_2094720
transcript_62929.known	chr16	+	1674	9	FSM	ENSG00000167964.13	ENST00000210187.11	1674	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	8.64580823289529	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTCTAGAGCAGGAT	1	True	NA	35	True	AATAAA	-41	NA	2148624	2154165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153046_2153145_2153223_2153318
transcript_62932.known	chr16	+	1720	8	FSM	ENSG00000167964.13	ENST00000562735.5	1720	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.95219047314276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGTGAATAAAGTTGT	0	True	NA	-20	True	NA	NA	NA	2148623	2154110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153223_2153318
transcript_62934.nic	chr16	+	1860	7	NIC	ENSG00000167964.13	novel	1922	9	NA	NA	-8	0	intron_retention	TRUE	canonical	3	31	junction_6	3.65148371670111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCTGTCTCATCTGTTG	-8	True	NA	9	True	AATAAA	-15	NA	2148615	2154139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2153223_2153318
transcript_62937.known	chr16	-	342	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	5	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTCAAGTGTCTTTA	-4	False	NA	0	True	AATAAA	-23	NA	2155358	2154796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2154923_2155142
transcript_62963.known	chr16	+	3683	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	0	0	0	0	multi-exon	TRUE	canonical	3	1002	junction_1	81.8256683443527	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	-5	True	NA	10	True	AATAAA	-21	NA	2155781	2178129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
transcript_63.known	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_5	2229.6709533023	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
transcript_63026.known	chr16	+	666	4	FSM	ENSG00000131653.13	ENST00000567653.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	104.260357865405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTTGCTGCTGGGTA	17	True	NA	6	True	AATAAA	-16	NA	2155803	2168510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076
transcript_63027.known	chr16	+	799	4	FSM	ENSG00000131653.13	ENST00000565383.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	514.839349268833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCTGGGTAGGGAA	7033	False	NA	11	True	AATAAA	-21	NA	2155697	2168515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2155859_2163882_2164002_2165856_2165937_2168076
transcript_63044.known	chr16	+	1671	9	FSM	ENSG00000167965.18	ENST00000569417.6	1671	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	142.176771573278	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGCGAGGGTGCCG	-15	True	NA	30	True	GATAAA	-19	NA	2205453	2209453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_63049.known	chr16	+	1861	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	171.797437044328	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	15	True	AATAAA	-16	NA	2205176	2209396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_63056.known	chr16	+	1691	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	135.959035650449	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	-8	True	NA	16	True	AATAAA	-17	NA	2205740	2209397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_63060.known	chr16	+	1588	9	FSM	ENSG00000167965.18	ENST00000565250.1	1588	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	180.396784893745	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGGCTCAGTCTGGGA	20	True	NA	-29	True	NA	NA	NA	2205768	2209352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_63062.known	chr16	+	1735	8	FSM	ENSG00000167965.18	ENST00000301724.14	1735	8	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	150.62427914977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGTCGATGCAGAGAT	25	False	NA	-11	True	AATAAA	-32	NA	2205493	2209412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449
transcript_63067.known	chr16	+	1403	8	FSM	ENSG00000167965.18	ENST00000565330.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	147.836230405162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGGCTAGCCTGCACT	-15	True	NA	NA	False	NA	NA	NA	2205453	2209098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_63072.known	chr16	+	1865	8	FSM	ENSG00000167965.18	ENST00000568542.5	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	179.238639238079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGATGTTGCTCGGGAAG	33	False	NA	12	True	AATAAA	-13	NA	2205256	2209393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_63088.known	chr16	+	1565	8	FSM	ENSG00000167965.18	ENST00000566835.5	1565	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	272.545895779266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCGATGCAGAGATAAAT	-18	True	NA	-7	True	AATAAA	-36	NA	2205730	2209416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208449_2208614_2208758
transcript_63091.known	chr16	+	854	7	FSM	ENSG00000167965.18	ENST00000567282.5	854	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	268.077103336584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGATGGAGTGGCTGC	18	True	NA	NA	False	GGGGCT	-15	NA	2205486	2208399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206030_2206215_2206360_2206410_2206483_2206660_2207034_2207111_2207192_2207346_2208209
transcript_63110.known	chr16	-	826	6	FSM	ENSG00000182685.8	ENST00000328540.8	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	9.95991967839099	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-6	True	NA	-18	True	AATAAA	-15	NA	2210863	2209252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
transcript_63112.known	chr16	+	2116	8	FSM	ENSG00000167965.18	ENST00000568194.5	2116	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_5	50.6943622836597	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	2	True	NA	16	True	AATAAA	-17	NA	2205470	2209397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_63113.known	chr16	+	1646	7	FSM	ENSG00000167965.18	ENST00000563067.5	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_5	52.7523037938208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATAAAAGCAGACCG	163	False	NA	-11	True	GGGGCT	-9	NA	2206028	2209370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208614_2208758
transcript_63114.nnic	chr16	-	4695	7	Fusion	ENSG00000182685.8_ENSG00000184207.9	novel	826	6	NA	NA	24	0	intron_retention	FALSE	canonical	3	37	junction_3	556.855157708597	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-4	True	NA	-18	True	AATAAA	-15	NA	2214816	2209252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782_2214054_2214137
transcript_63118.known	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1544	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-28	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2214054_2214137
transcript_63124.nnic	chr16	+	2661	14	NNC	ENSG00000167967.16	novel	2548	14	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	41.2970191052847	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	8162	False	NA	15	True	AATAAA	-16	NA	2223447	2235742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2234972_2235080_2235144_2235215
transcript_63125.known	chr16	+	2548	14	FSM	ENSG00000167967.16	ENST00000301727.9	2548	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	21.2947753127687	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	-6	True	NA	15	True	AATAAA	-16	NA	2223590	2235742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_63129.nic	chr16	+	2802	14	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	40.7008134196081	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	8210	False	NA	15	True	AATAAA	-16	NA	2223495	2235742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2223930_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_63140.nnic	chr16	+	2355	13	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	45.2720173568128	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	-23	True	NA	15	True	AATAAA	-16	NA	2223573	2235742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_63183.known	chr16	+	1349	7	FSM	ENSG00000167968.13	ENST00000320700.10	1349	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.47767812455308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTCCCAGGCCTCTG	-12	True	NA	NA	False	AATAAA	-27	NA	2236443	2238711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2236561_2236777_2236961_2237037_2237127_2237217_2237302_2237375_2237650_2237766_2238019_2238361
transcript_63185.known	chr16	+	1301	7	FSM	ENSG00000167968.13	ENST00000567494.5	1301	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.47767812455308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTCCCAGGCCTCTG	13	True	NA	NA	False	AATAAA	-27	NA	2236468	2238711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2236561_2236800_2236961_2237037_2237127_2237217_2237302_2237375_2237650_2237766_2238019_2238361
transcript_63188.known	chr16	+	2493	14	FSM	ENSG00000167967.16	ENST00000564139.5	2493	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	44.3263849458408	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	-3	True	NA	15	True	AATAAA	-16	NA	2223593	2235742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2234950_2235080_2235144_2235215
transcript_63189.known	chr16	-	1507	7	FSM	ENSG00000167969.13	ENST00000301729.9	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_6	104.413707061009	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGAAACAAAGGTTTTT	-3	True	NA	NA	False	NA	NA	NA	2251587	2239401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
transcript_63190.known	chr16	-	948	7	FSM	ENSG00000167969.13	ENST00000562238.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	2	85	junction_2	370.984276396363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCAGCGTTTCATTT	12	True	NA	-30	True	NA	NA	NA	2251572	2239894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2240146_2243045_2243225_2243368_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
transcript_63197.nic	chr16	-	2001	6	ISM	ENSG00000167969.13	ENST00000301729.9	1507	7	-50	2456	-46	557	5prime_fragment	FALSE	canonical	3	842	junction_5	97.3209124494833	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCGGGCGTGATGGCAC	1620	False	NA	NA	False	NA	NA	NA	2251637	2241857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
transcript_63200.known	chr16	-	705	4	FSM	ENSG00000167969.13	ENST00000561688.1	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	100.599315217462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGAGGCTGTGTGGGTG	22	True	NA	NA	False	NA	NA	NA	2251562	2244137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2244553_2246858_2246987_2251315_2251430_2251514
transcript_63230.known	chr16	-	2298	8	FSM	ENSG00000205937.12	ENST00000565678.5	2298	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1087.17625253757	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCAAATCTAGTTCTG	1243	False	NA	65	True	AATAAA	-10	NA	2267603	2253129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267174
transcript_63231.known	chr16	-	1792	8	FSM	ENSG00000205937.12	ENST00000568631.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	1086.8600721006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCAGCCGGGCCCCGGC	1017	False	NA	NA	False	NA	NA	NA	2267829	2253827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267208
transcript_63233.known	chr16	-	2069	8	FSM	ENSG00000205937.12	ENST00000397086.6	2069	8	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_7	1002.93194674211	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGTTCACTGCCTTC	998	False	NA	79	True	AATAAA	-24	NA	2267848	2253115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267662
transcript_63234.known	chr16	-	1092	8	FSM	ENSG00000205937.12	ENST00000561518.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	1084.64738933152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATCACGGTCCCCGGGC	792	False	NA	NA	False	NA	NA	NA	2268054	2254028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267932
transcript_63235.known	chr16	-	1951	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_7	744.902486427394	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGGGTTCACTGC	2	True	NA	75	True	AATAAA	-20	NA	2268126	2253119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
transcript_63254.known	chr16	-	918	7	FSM	ENSG00000205937.12	ENST00000569598.6	918	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1211.69784462409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGCACCCCTCTGCCAG	-4	True	NA	NA	False	NA	NA	NA	2268095	2253839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263162_2264572_2264761_2268054
transcript_63269.known	chr16	-	2037	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_6	703.416582750854	9339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-5	True	NA	78	True	AATAAA	-23	NA	2268397	2253116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_63290.known	chr16	-	830	6	FSM	ENSG00000205937.12	ENST00000567147.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1261.36824123648	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGCAGGCAGCAGGC	775	False	NA	NA	False	NA	NA	NA	2268071	2253855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_63296.known	chr16	-	735	5	FSM	ENSG00000205937.12	ENST00000570051.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_4	833.016356382034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGGCTGCACTTCTT	14	True	NA	NA	False	GGGGCT	-14	NA	2268114	2262207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_63308.known	chr16	-	6602	33	FSM	ENSG00000167972.14	ENST00000301732.10	6602	33	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_17	5.73767360848454	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGTCTGTGGGTCACA	4	True	NA	-5	True	AATAAA	-16	NA	2340728	2275880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2276806_2277596_2277671_2277878_2278070_2278287_2278459_2278942_2279131_2281026_2281222_2281380_2281510_2283185_2283359_2284278_2284438_2284778_2284999_2285441_2285647_2286693_2286968_2288025_2288330_2289433_2289621_2292139_2292239_2295589_2295741_2297328_2297540_2297765_2297922_2298385_2298541_2299402_2299533_2300004_2300149_2303968_2304151_2308449_2308624_2317282_2317404_2317647_2317765_2319580_2319841_2323522_2323689_2324403_2324532_2326009_2326275_2326412_2326493_2328452_2328758_2329647_2329855_2340572
transcript_63320.known	chr16	+	4230	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	54.0014105718545	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGATGGACGTCCTT	-2	True	NA	29	True	ATTAAA	-20	NA	2429446	2458854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_63331.known	chr16	+	4173	16	FSM	ENSG00000162063.13	ENST00000293968.11	4173	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	125.558308721044	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGAGTGATGGACGTC	-5	True	NA	26	True	ATTAAA	-17	NA	2429393	2458851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2429498_2431129_2431285_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_6335.known	chr1	-	2922	7	FSM	ENSG00000084628.10	ENST00000373736.7	2922	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	23.3267847953568	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTGTCCTGCCCATTG	7	True	NA	-4	True	ATTAAA	-20	NA	31239887	31179744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31181713_31181859_31181942_31182529_31182591_31183816_31184015_31185246_31185328_31188049_31188188_31239493
transcript_63363.known	chr16	+	857	4	FSM	ENSG00000162063.13	ENST00000569093.1	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	69.6387503876653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGCTCCTTGAAAGAAA	0	True	NA	NA	False	NA	NA	NA	2429448	2436351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805
transcript_63369.known	chr16	+	1633	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	45.8583433447065	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	-14	True	NA	17	True	ATTAAA	-17	NA	2460108	2464963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_63375.known	chr16	+	1864	9	FSM	ENSG00000162062.15	ENST00000563531.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	48.4613247858537	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTTGTGTGATATTAAA	11	True	NA	-19	True	NA	NA	NA	2460133	2464927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_63381.nic	chr16	+	1915	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-18	0	intron_retention	FALSE	canonical	3	114	junction_1	47.6443530232073	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	1795	False	NA	17	True	ATTAAA	-17	NA	2460067	2464963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2460171_2460282_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_63383.nic	chr16	+	1559	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	73.1948384450707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	1811	False	NA	17	True	ATTAAA	-17	NA	2460083	2464963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_63385.nic	chr16	+	2487	8	NIC	ENSG00000162062.15	novel	1911	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	114	junction_1	51.3765610021551	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	1795	False	NA	16	True	ATTAAA	-16	NA	2460067	2464962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_63387.known	chr16	+	2156	8	FSM	ENSG00000162062.15	ENST00000569994.5	2156	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	50.6016858636637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	-5	True	NA	16	True	ATTAAA	-16	NA	2460117	2464962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460171_2460282_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_6339.known	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_2	130.173768004707	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-12	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
transcript_63391.nic	chr16	+	1850	8	NIC	ENSG00000162062.15	novel	2156	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	34	junction_1	78.2286027340019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	1811	False	NA	16	True	ATTAAA	-16	NA	2460083	2464962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_63400.known	chr16	+	1709	9	FSM	ENSG00000162062.15	ENST00000483320.5	1709	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.6791230219306	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	22	True	NA	17	True	ATTAAA	-17	NA	2460144	2464963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_63406.known	chr16	+	3172	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	32.251511592482	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	-10	True	NA	27	True	AATACA	-22	NA	2520370	2531417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
transcript_63408.known	chr16	+	2049	11	FSM	ENSG00000162066.16	ENST00000413459.7	2049	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	59.7110542529606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTCTTGCCAGGGCT	9	True	NA	NA	False	NA	NA	NA	2520389	2530954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474_2529526_2530256
transcript_63421.known	chr16	+	2890	10	FSM	ENSG00000162066.16	ENST00000648227.1	2890	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	62.0089599260551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGATGGTTGGTCCACA	16	True	NA	NA	False	GGGGCT	-2	NA	2520396	2531230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528993_2529096_2529474
transcript_63423.known	chr16	+	3273	10	FSM	ENSG00000162066.16	ENST00000302956.8	3273	10	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_8	25.5579709003514	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTCTGTGACATGAAGT	-16	True	NA	32	True	AATACA	-27	NA	2520364	2531422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474
transcript_63444.known	chr16	+	940	9	FSM	ENSG00000162066.16	ENST00000566706.5	940	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	81.4323914360864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCGGGTGAGCTGGTGT	40	True	NA	NA	False	NA	NA	NA	2520420	2529517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2528059_2528149_2528235_2528381_2528451_2528560_2528993_2529096_2529474
transcript_63446.known	chr16	+	1117	9	FSM	ENSG00000162066.16	ENST00000563633.5	1117	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	65.8843684040456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAGGGGACCCTGGACT	12	True	NA	NA	False	GGGGCT	-7	NA	2520392	2529060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993
transcript_63474.known	chr16	+	6673	7	FSM	ENSG00000162065.14	ENST00000567020.6	6673	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	3.87298334620742	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGAAATAACTTGC	3446	False	NA	21	True	AATAAA	-22	NA	2475050	2505734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2475171_2496033_2497114_2498237_2498397_2499356_2499421_2499834_2499931_2500267_2500491_2500803
transcript_6349.known	chr1	-	677	2	FSM	ENSG00000060688.13	ENST00000463988.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	1445	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAATCCTAGCTAGC	-6	True	NA	NA	False	NA	NA	NA	31296782	31292843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31293349_31296610
transcript_63498.known	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_1	22	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	-10	True	NA	26	True	AATAAA	-15	NA	2513951	2520218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2514183_2519217_2519402_2519540
transcript_635.known	chr1	-	982	10	FSM	ENSG00000131591.18	ENST00000482816.5	982	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.5394030834453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGCCCGGTTAGGACC	5048	False	NA	NA	False	NA	NA	NA	1116243	1083925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_63504.nic	chr16	+	2110	15	NIC	ENSG00000140992.19	novel	2416	14	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	19.6376616505642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCCAACCACACAAAGAAC	1	True	NA	NA	False	AAGAAA	-14	NA	2537987	2597928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2538137_2538618_2538772_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_63508.known	chr16	+	7184	14	FSM	ENSG00000140992.19	ENST00000342085.9	7184	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	9.79493891774557	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGCTGGCGTGGCTC	0	True	NA	15	True	AATAAA	-17	NA	2538020	2603188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_63516.known	chr16	+	4728	11	FSM	ENSG00000140992.19	ENST00000268673.11	4728	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	17.9064234284795	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGATTTCTTACTTTT	-2	True	NA	31	True	TTTAAA	-27	NA	2538002	2601095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_6352.known	chr1	+	1705	9	FSM	ENSG00000121766.16	ENST00000546109.5	1705	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	250.72145899384	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_63526.known	chr16	+	1125	3	FSM	ENSG00000140992.19	ENST00000570136.5	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGTGGAAGTTGGGGTGG	0	True	NA	NA	False	ATTAAA	-29	NA	2538020	2562227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2538137_2557702_2557964_2561479
transcript_63527.known	chr16	-	3626	1	FSM	ENSG00000269937.1	ENST00000569852.1	3626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGGAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	2565096	2561470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2561500_2565100
transcript_63528.known	chr16	-	2001	1	FSM	ENSG00000261613.2	ENST00000563449.2	2001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAAACGTTTATTTGT	NA	False	NA	NA	False	AATAAA	-33	NA	2556060	2554059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2554100_2556100
transcript_63530.known	chr16	+	2748	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	7.31816613336672	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAATAAGTTACTA	5471	False	NA	NA	False	AATAAA	-23	NA	2603349	2630494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
transcript_63536.nic	chr16	+	4312	3	NIC	ENSG00000215154.6	novel	2748	4	NA	NA	-10	-1283	intron_retention	FALSE	canonical	3	50	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAAATTGTGCA	-4	True	NA	NA	False	AAAAAG	-7	NA	2603409	2629211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2603728_2610461_2614069_2628824
transcript_63540.known	chr16	-	2718	4	FSM	ENSG00000260565.8	ENST00000661984.1	2718	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCGTTGTCTTGTGTCT	-8	True	NA	-3	True	NA	NA	NA	2673419	2660350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2661382_2663083_2663408_2671344_2672571_2673282
transcript_63541.known	chr16	-	2810	5	FSM	ENSG00000260565.8	ENST00000654949.1	2810	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTCTCTTATCTCGT	31	True	NA	-15	True	NA	NA	NA	2673380	2660362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2661382_2663083_2663408_2669410_2669562_2671344_2672563_2673282
transcript_63542.known	chr16	+	2434	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	30.6698549067321	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	-2	True	NA	16	True	AATAAA	-17	NA	2682522	2709030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
transcript_63544.known	chr16	+	774	5	FSM	ENSG00000167977.9	ENST00000564195.1	774	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	173.207065387068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGAGACGGGCCCAGC	15	False	NA	NA	False	NA	NA	NA	2682539	2707479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2682801_2695934_2696044_2699820_2699917_2702352_2702479_2707297
transcript_63549.known	chr16	-	1135	6	FSM	ENSG00000172382.10	ENST00000302641.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.35430821141545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCACGTGGGGATCCT	0	True	NA	-6	True	AATAAA	-19	NA	2720224	2712421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2715717_2715881_2716499_2716527_2720114
transcript_63552.known	chr16	-	1297	5	FSM	ENSG00000172382.10	ENST00000565903.5	1297	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	5.40832691319598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCCCACGTGGGGATC	NA	False	NA	-8	True	AATAAA	-17	NA	2720551	2712423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2716499_2716527_2720114
transcript_63568.nic	chr16	+	1427	5	ISM	ENSG00000167978.17	ENST00000301740.13	9044	15	-617	12888	-605	0	5prime_fragment	FALSE	canonical	3	870	junction_1	331.947567395816	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	-2	True	NA	38	True	NA	NA	NA	2752020	2758524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469
transcript_6357.known	chr1	+	761	8	FSM	ENSG00000121766.16	ENST00000479629.5	761	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	262.506831786706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGAATGCTACTTT	-20	True	NA	NA	False	AAAAAG	-2	NA	31296997	31348968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828
transcript_63571.known	chr16	-	582	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	3240.46470432869	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	2	True	NA	-8	True	AATAAA	-16	NA	2777277	2771413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
transcript_63574.known	chr16	+	461	4	FSM	ENSG00000167978.17	ENST00000576415.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	634.408911244685	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	42	True	NA	38	True	NA	NA	NA	2752713	2758524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469
transcript_63578.known	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	4933	junction_3	1502.92078596608	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-1	True	NA	-8	True	AATAAA	-16	NA	2777280	2771413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
transcript_63580.known	chr16	-	331	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	2272	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTTGCTGCCTCTTT	7	True	NA	-8	True	AATAAA	-16	NA	2777272	2771942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2776992_2777128_2777236
transcript_63582.known	chr16	-	472	3	FSM	ENSG00000103363.16	ENST00000494946.6	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3630	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	9478	False	NA	-6	True	AATAAA	-18	NA	2777127	2771940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2775450_2775626_2776992
transcript_63585.known	chr16	+	1759	3	FSM	ENSG00000167978.17	ENST00000574331.5	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	6.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	307	False	NA	16	True	AATAAA	-16	NA	2769373	2771410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2770466_2770603_2770718_2770857
transcript_63586.known	chr16	-	997	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	7288	junction_1	636.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGCATTTCTCATTT	9410	False	NA	-9	True	AATAAA	-15	NA	2777195	2771414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2775450_2775557_2776992
transcript_63587.known	chr16	+	3250	1	FSM	ENSG00000276791.1	ENST00000621230.1	3250	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTTCTGTGCATCG	5335	False	NA	6	True	AATAAA	-15	NA	2777318	2780568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2777300_2780600
transcript_63588.known	chr16	+	1091	6	FSM	ENSG00000007038.11	ENST00000005995.8	1091	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.979795897113271	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTCATGGACAGC	-1	True	NA	27	True	AATAAA	-39	NA	2817236	2821719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818676_2818970_2820954_2821110_2821365
transcript_6359.known	chr1	+	1568	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	57.2224445761041	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	14	True	NA	32	True	ACTAAA	-23	NA	31297031	31364936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_63600.known	chr16	-	1383	6	FSM	ENSG00000005001.10	ENST00000161006.8	1383	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.65329983228432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTTTTTCCCATGC	-1	True	NA	-5	True	AATAAA	-15	NA	2858170	2852729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2853330_2853864_2854023_2855573_2855852_2856081_2856254_2856821_2856849_2858022
transcript_63601.known	chr16	-	1037	5	FSM	ENSG00000005001.10	ENST00000571228.1	1037	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTTTTTCCCATGC	496	False	NA	-5	True	AATAAA	-15	NA	2858154	2852729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2853330_2853864_2854023_2856133_2856254_2856821_2856849_2858022
transcript_63602.known	chr16	-	761	3	FSM	ENSG00000263280.3	ENST00000662388.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGTCGGAGTACTCTG	NA	False	NA	NA	False	AATAAA	-38	NA	2868251	2866324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2866857_2867460_2867530_2868091
transcript_63605.known	chr16	+	990	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	31.3793987620328	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	-1	True	NA	12	True	AATAAA	-26	NA	2883214	2899365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
transcript_63606.known	chr16	+	915	4	FSM	ENSG00000162076.13	ENST00000293981.10	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	114.624023078352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCTTCTGGGTCCTT	-3	True	NA	29	True	AATAAA	-43	NA	2883212	2899382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2883273_2895219_2895321_2896351_2896772_2899048
transcript_63607.known	chr16	+	754	3	FSM	ENSG00000162076.13	ENST00000572006.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGAGCAGTGGCACAGG	-11	True	NA	NA	False	NA	NA	NA	2883258	2896896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2883367_2895219_2895321_2896351
transcript_63608.nic	chr16	+	918	3	NIC	ENSG00000162076.13	novel	990	4	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	117	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	19	False	NA	12	True	AATAAA	-26	NA	2883185	2899365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2883367_2896351_2896772_2899048
transcript_6362.known	chr1	+	1730	8	FSM	ENSG00000121766.16	ENST00000373714.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	209.442408430049	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	-10	True	NA	32	True	ACTAAA	-23	NA	31297007	31364936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297214_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_63620.known	chr16	+	4963	10	FSM	ENSG00000059122.17	ENST00000416288.6	4963	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	24.0744729311688	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACGTATCAACTAAGAA	-12	True	NA	NA	False	AATAAA	-14	NA	2911998	2951199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930412_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031_2940093_2948687
transcript_63622.nic	chr16	+	2593	9	ISM	ENSG00000059122.17	ENST00000253928.14	5043	10	0	11045	0	0	5prime_fragment	FALSE	canonical	3	98	junction_3	13.3510299228187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTCTCAGCTTTTGT	1	True	NA	NA	False	AAAACA	-8	NA	2911930	2940163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930409_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031
transcript_6364.nic	chr1	+	712	7	ISM	ENSG00000121766.16	ENST00000344147.10	1568	8	-55	15968	-5	0	5prime_fragment	FALSE	canonical	3	558	junction_1	61.7701833861253	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGAATGCTACTTT	-5	True	NA	NA	False	AAAAAG	-2	NA	31296976	31348968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828
transcript_6365.known	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	236.603512700514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
transcript_6366.known	chr1	+	1534	7	FSM	ENSG00000121766.16	ENST00000616393.4	1534	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	236.031600991619	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_63665.known	chr16	-	1806	9	FSM	ENSG00000127564.17	ENST00000574730.5	1806	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	177.381474511855	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	8	True	NA	-64	True	NA	NA	NA	2980439	2972848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2976825_2979647_2979913_2980285
transcript_63673.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_6	61.8595940416683	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTCATGTGGCAACAT	1	True	NA	-23	True	AATAAA	-28	NA	2980446	2972807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_63676.nic	chr16	-	2196	9	NIC	ENSG00000127564.17	novel	2061	9	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_8	159.754059025115	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	1638	False	NA	-6	True	AATAAA	-45	NA	2980540	2972790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979937_2980285
transcript_63679.known	chr16	-	1891	9	FSM	ENSG00000127564.17	ENST00000573944.5	1891	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	162.72671684453	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGTGTCTAATAAAAAGT	-32	True	NA	-66	True	NA	NA	NA	2980479	2972850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979913_2980285
transcript_63681.known	chr16	-	1892	9	FSM	ENSG00000127564.17	ENST00000574385.5	1892	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	208.437603073438	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACCCAAGCTTGCTCA	23	True	NA	-34	True	AATAAA	-17	NA	2980424	2972818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979937_2980285
transcript_63702.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000440027.6	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	164.550144332966	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	1	True	NA	-6	True	AATAAA	-45	NA	2980391	2972790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973254_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_6375.known	chr1	-	1097	4	FSM	ENSG00000121769.8	ENST00000373713.7	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	3.55902608401044	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAAATGACCACTG	-1	True	NA	NA	False	NA	NA	NA	31373076	31365252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31365940_31367392_31367495_31369384_31369558_31372941
transcript_63769.known	chr16	+	2685	3	FSM	ENSG00000162073.14	ENST00000318782.9	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	19	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGGAACTTCTTGT	16	True	NA	11	True	AATAAA	-17	NA	2969347	2973484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969841_2971156_2971379_2971514
transcript_63772.known	chr16	+	2644	3	FSM	ENSG00000162073.14	ENST00000293978.12	2644	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	76	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	10	False	NA	9	True	AATAAA	-15	NA	2969269	2973482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969841_2971273_2971379_2971514
transcript_63774.known	chr16	+	842	3	FSM	ENSG00000162073.14	ENST00000576565.1	842	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	78	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGATGCTTCCAGCTC	9	True	NA	NA	False	GGGGCT	-4	NA	2969340	2972031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969444_2971156_2971379_2971514
transcript_63777.known	chr16	+	2251	2	FSM	ENSG00000162073.14	ENST00000572687.1	2251	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	5	False	NA	9	True	AATAAA	-15	NA	2969557	2973482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969841_2971514
transcript_63778.known	chr16	-	846	2	FSM	ENSG00000127564.17	ENST00000571102.1	846	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAGAGAGCGGAGATGA	NA	False	NA	NA	False	NA	NA	NA	2970241	2968023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2968516_2969887
transcript_63779.known	chr16	+	1995	9	FSM	ENSG00000131650.14	ENST00000303746.10	1995	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.1840579525043	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	-1	True	NA	8	True	AATAAA	-16	NA	2964274	2968380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
transcript_63780.known	chr16	+	1882	8	FSM	ENSG00000131650.14	ENST00000319500.10	1882	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	20.7423455269452	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGAAAGTTCTTCCGTG	36	False	NA	11	True	AATAAA	-19	NA	2964311	2968383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967809
transcript_63781.known	chr16	+	2339	7	FSM	ENSG00000131650.14	ENST00000572045.5	2339	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.6562462982701	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	588	False	NA	8	True	AATAAA	-16	NA	2964215	2968380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319
transcript_63782.known	chr16	+	1877	9	FSM	ENSG00000131650.14	ENST00000571007.5	1877	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.0227155455452	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGCCTCGAAAGTTCTTC	-1	True	NA	7	True	AATAAA	-15	NA	2964274	2968379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966758_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
transcript_63783.known	chr16	+	1798	8	FSM	ENSG00000131650.14	ENST00000575885.5	1798	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	26.8381391733055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGCCTCGAAAGTTCTTC	-1	True	NA	7	True	AATAAA	-15	NA	2964274	2968379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966758_2966796_2966909_2967243_2967319_2967446_2967809
transcript_63790.known	chr16	+	1583	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCTAATCTGTGCGC	0	True	NA	NA	False	AATAAA	-17	NA	3012922	3014505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3012900_3014500
transcript_63791.known	chr16	+	648	4	FSM	ENSG00000006327.14	ENST00000573001.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	700.302950316663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCATTTGCACAGGGGAG	45	False	NA	NA	False	AAAACA	-22	NA	3018444	3022086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3018537_3021214_3021320_3021554_3021690_3021770
transcript_63792.known	chr16	+	977	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	1214	junction_1	133.479087001173	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	-1	True	NA	23	True	AATAAA	-19	NA	3020367	3022383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
transcript_63795.known	chr16	+	583	4	FSM	ENSG00000006327.14	ENST00000574699.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	702.187217833598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTGGGCCCAGGGTTC	-1	True	NA	NA	False	NA	NA	NA	3020367	3021963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3020492_3021188_3021320_3021554_3021690_3021770
transcript_63797.known	chr16	+	881	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	719.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	-10	True	NA	23	True	AATAAA	-19	NA	3020358	3022383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3020492_3021554_3021690_3021770
transcript_63798.known	chr16	+	1678	3	FSM	ENSG00000006327.14	ENST00000571351.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	1459	junction_1	32.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	21	False	NA	23	True	AATAAA	-19	NA	3020389	3022383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3021320_3021554_3021690_3021770
transcript_63799.known	chr16	+	1300	14	FSM	ENSG00000131652.14	ENST00000574549.5	1300	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	306.571400604556	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTTCTATGAATGG	5	True	NA	69	True	AATAAA	-22	NA	3024040	3027755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3024087_3024192_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_63802.known	chr16	+	1360	13	FSM	ENSG00000131652.14	ENST00000575576.5	1360	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	237.503099394981	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAATAAAGTTTCAGG	18	True	NA	36	True	NA	NA	NA	3024053	3027722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_63809.nnic	chr16	+	1356	12	NIC	ENSG00000131652.14	novel	1411	13	NA	NA	-48	0	intron_retention	FALSE	canonical	3	30	junction_10	248.55010968574	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTCTTTCTTTCTATG	705	False	NA	64	True	AATAAA	-17	NA	3023978	3027750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027365_3027501_3027576
transcript_63820.known	chr16	-	2083	11	FSM	ENSG00000162069.16	ENST00000642419.1	2083	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	22.9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAATGAAAAACACTCT	13	True	NA	62	True	AAAAAG	-32	NA	3036926	3027711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3031409_3031509_3035214_3035527_3036893
transcript_63831.known	chr16	+	3674	10	FSM	ENSG00000008516.18	ENST00000336577.9	3674	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	7.24185366080014	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCCATTCTTCTGAGC	-1	True	NA	15	True	AATAAA	-17	NA	3046560	3060726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3047017_3047414_3047548_3050008_3050145_3050253_3050547_3057032_3057210_3057309_3057395_3057530_3057614_3058180_3058334_3058411_3058670_3058826
transcript_63835.known	chr16	-	2032	10	FSM	ENSG00000162069.16	ENST00000572449.6	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	12.2020034784821	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGGGGGTGTCGTCA	-5	True	NA	92	True	AAAAAG	-28	NA	3036944	3027681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3035214_3035527_3036893
transcript_63879.known	chr16	-	495	5	FSM	ENSG00000103145.11	ENST00000573842.1	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	186.37244297374	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCAGTCCCCCCTACC	-15	True	NA	NA	False	NA	NA	NA	3024286	3022917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3023969_3024180
transcript_6389.known	chr1	+	1900	10	FSM	ENSG00000168528.12	ENST00000373709.8	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	23.5738922340315	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGCCCCTCACCCT	-7	True	NA	28	True	AATAAA	-20	NA	31413212	31434678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31413305_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_63890.known	chr16	-	656	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_3	103.82998924524	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	26	True	NA	-27	True	AATAAA	-19	NA	3023942	3022624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
transcript_63891.known	chr16	-	610	4	FSM	ENSG00000103145.11	ENST00000572355.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	241.905399324245	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTCAGTCTGGAAC	37	True	NA	-31	True	AATAAA	-15	NA	3024234	3022628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3024180
transcript_63893.known	chr16	-	828	4	FSM	ENSG00000103145.11	ENST00000573095.1	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	211.54826084529	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAGTCTGGAACCTG	4618	False	NA	-28	True	AATAAA	-18	NA	3024215	3022625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023531_3023846_3023969_3024180
transcript_63898.known	chr16	-	618	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	213.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	7	True	NA	-27	True	AATAAA	-19	NA	3023961	3022624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023846
transcript_63900.known	chr16	-	765	3	FSM	ENSG00000103145.11	ENST00000354679.3	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	273.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCCTTCTTCCCCAC	-2	True	NA	NA	False	NA	NA	NA	3024273	3022840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023413_3023846
transcript_63902.known	chr16	-	1199	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	259	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	2	True	NA	-27	True	AATAAA	-19	NA	3024269	3022624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023969_3024180
transcript_63903.known	chr16	-	410	3	FSM	ENSG00000261971.9	ENST00000572222.2	639	3	224	5	223	-5	multi-exon	FALSE	canonical	0	0	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGTGGTGGCATGTGCC	9136	False	NA	NA	False	AATAAA	-14	NA	3059085	3057860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3058018_3058539_3058703_3058995
transcript_63904.known	chr16	-	560	2	FSM	ENSG00000261971.9	ENST00000572427.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCCTCCAGCTGCCGGT	24	True	NA	NA	False	NA	NA	NA	3059308	3058455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3058703_3058995
transcript_63906.known	chr16	-	1811	9	FSM	ENSG00000162069.16	ENST00000389347.4	1811	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	7.90174031463955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTATCTTTTCTAGGGCA	1398	False	NA	-93	True	AATATA	-1	NA	3035541	3027866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3035214
transcript_63907.known	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	10	True	NA	-65	True	NA	NA	NA	3024261	3022662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232
transcript_63908.known	chr16	+	818	7	FSM	ENSG00000008517.19	ENST00000525643.7	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.52016505389306	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGGGGAGATACCATG	3	True	NA	4	True	AATAAA	-17	NA	3065639	3069530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_63934.known	chr16	-	2716	6	FSM	ENSG00000130182.8	ENST00000576985.6	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	145.53542524073	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-4	True	NA	-31	True	ATTAAA	-31	NA	3099294	3088889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
transcript_63949.known	chr16	-	2247	5	FSM	ENSG00000130182.8	ENST00000575108.5	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	220.854024187924	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCTCTTTATTT	-2	True	NA	-35	True	ATTAAA	-27	NA	3099292	3088893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3099189
transcript_6395.known	chr1	+	2062	10	FSM	ENSG00000168528.12	ENST00000536384.2	2062	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.4502997160082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCCCTCACCCTCA	-28	True	NA	30	True	AATAAA	-22	NA	31413812	31434680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31414065_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_63951.known	chr16	-	2350	5	FSM	ENSG00000130182.8	ENST00000538082.5	2350	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	205.984677828231	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCACTTTCACAGCTG	-5	True	NA	-130	True	NA	NA	NA	3099295	3088988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092541_3093005_3099189
transcript_63961.known	chr16	-	575	4	FSM	ENSG00000130182.8	ENST00000572431.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	250.360184978008	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCCGCACGCCTGCCA	62	False	NA	NA	False	NA	NA	NA	3099228	3090233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3099189
transcript_63965.nic	chr16	-	3215	4	NIC	ENSG00000130182.8	novel	2716	6	NA	NA	-53	0	intron_retention	FALSE	canonical	3	314	junction_3	114.4581437324	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	NA	False	NA	-31	True	ATTAAA	-31	NA	3099348	3088889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3090647_3091539_3091598_3091763_3093005_3099189
transcript_63975.known	chr16	+	2062	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.0587801693788	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	-18	True	NA	20	True	ATTAAA	-16	NA	3112559	3120517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_63976.nnic	chr16	+	1941	7	NNC	ENSG00000122386.11	novel	1968	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	25.9293913027925	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	5780	False	NA	20	True	ATTAAA	-16	NA	3112546	3120517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_3112683_3113416_3113488_3115354_3115503_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_63977.known	chr16	+	1968	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	19.3081732837562	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	8	True	NA	20	True	ATTAAA	-16	NA	3112585	3120517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_63979.known	chr16	+	1006	7	FSM	ENSG00000122386.11	ENST00000414351.5	1006	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	23.2067997697993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGCCCAACGAGGAGG	217	False	NA	NA	False	NA	NA	NA	3112794	3119496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112951_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_63980.nnic	chr16	+	2162	7	NNC	ENSG00000122386.11	novel	1968	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	23.2067997697993	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	8	True	NA	20	True	ATTAAA	-16	NA	3112585	3120517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_3112877_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_63981.known	chr16	+	2309	7	FSM	ENSG00000122386.11	ENST00000620094.4	2309	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.1551696790195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCCCGCCTACACAGCT	1	True	NA	18	True	ATTAAA	-14	NA	3112578	3120515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112951_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_63986.known	chr16	+	2240	6	FSM	ENSG00000085644.14	ENST00000576416.5	2240	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	10.8921990433521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTGGAGGACTGGCCTT	-16	True	NA	NA	False	NA	NA	NA	3135132	3141779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3135446_3137165_3137680_3138417_3138542_3138744_3138819_3138974_3139099_3140688
transcript_63997.known	chr16	-	1489	4	FSM	ENSG00000263072.9	ENST00000573447.2	1489	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	19.0262975904404	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	-11	True	NA	-33	True	NA	NA	NA	3134873	3128861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3129654_3131746_3132104_3132849_3132946_3134629
transcript_64000.known	chr16	-	1592	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-20	True	NA	NA	False	NA	NA	NA	3134882	3128671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3129654_3131746_3132104_3134629
transcript_64002.known	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	50	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	8860	False	NA	-12	True	CATAAA	-17	NA	3134827	3131667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3132104_3134629
transcript_64003.known	chr16	+	3245	6	FSM	ENSG00000085644.14	ENST00000576863.1	3245	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	9.49947366963033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTGTTCTGTTCT	10	True	NA	13	True	AATAAA	-13	NA	3135158	3142804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3135388_3137165_3137680_3138353_3138542_3138744_3138819_3138974_3139099_3140688
transcript_64004.known	chr16	-	2373	5	FSM	ENSG00000010539.12	ENST00000396870.8	2373	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	20.7484939212464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTCTCATTTGT	-19	True	NA	-103	True	AATATA	-13	NA	3235186	3223335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_64005.known	chr16	-	1350	5	FSM	ENSG00000010539.12	ENST00000575948.1	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	19.2272592950738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGAACCCTTTCTGGG	-5	True	NA	NA	False	NA	NA	NA	3235070	3223891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_64006.known	chr16	-	3162	5	FSM	ENSG00000010539.12	ENST00000396871.8	3162	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	25.5868618630734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTTTCTTGCCTT	110	False	NA	-33	True	NA	NA	NA	3235457	3222341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3235111
transcript_64018.known	chr16	+	2859	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	21.7153299665364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3	True	NA	NA	False	AATAAA	-17	NA	3305496	3318851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_64019.known	chr16	+	3282	6	FSM	ENSG00000006194.10	ENST00000219069.6	3282	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	25.7371327074327	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	-4	True	NA	NA	False	AATAAA	-20	NA	3283490	3291460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022_3286150_3288453_3288571_3289392
transcript_64020.nnic	chr16	+	3354	6	NNC	ENSG00000006194.10	novel	3282	6	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	35.0679340708859	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	-2	True	NA	NA	False	AATAAA	-20	NA	3283379	3291460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_3284206_3285058_3285240_3285719_3285755_3286022_3286150_3288453_3288571_3289392
transcript_64027.nic	chr16	+	3210	5	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	38.8289518272126	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	0	True	NA	NA	False	AATAAA	-20	NA	3283381	3291460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3284206_3285680_3285755_3286022_3286150_3288453_3288571_3289392
transcript_64028.known	chr16	+	598	5	FSM	ENSG00000162086.16	ENST00000571101.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	36.9687367920517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGCAGGCGTCATA	14	True	NA	NA	False	NA	NA	NA	3305507	3317252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_64029.nic	chr16	+	2261	4	ISM	ENSG00000006194.10	ENST00000219069.6	3282	6	-429	4576	-423	0	5prime_fragment	FALSE	canonical	3	40	junction_2	6.34209919681348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTGTGTGTACATTA	608	False	NA	NA	False	AATAAA	-25	NA	3283061	3286884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022
transcript_64033.nic	chr16	+	3136	4	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.6696968444882	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	0	True	NA	NA	False	AATAAA	-20	NA	3283381	3291460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3284206_3286022_3286150_3288453_3288571_3289392
transcript_64034.known	chr16	+	851	3	FSM	ENSG00000006194.10	ENST00000575823.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	36.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGAGAAGCCCTATCAG	402	False	NA	NA	False	NA	NA	NA	3283954	3289875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3284206_3288453_3288571_3289392
transcript_64036.known	chr16	+	1139	2	FSM	ENSG00000006194.10	ENST00000574253.1	1139	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGAACACCCATCTGAC	15	True	NA	NA	False	NA	NA	NA	3283509	3289835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3284206_3289392
transcript_64037.nnic	chr16	+	2108	2	NNC	ENSG00000162086.16	novel	2546	6	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCCGGGTGCAGTGACTC	NA	False	NA	NA	False	AAAACA	-19	NA	3305471	3309485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_3306407_3308312
transcript_64038.nic	chr16	+	1339	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	72	9089	-6	13	5prime_fragment	FALSE	canonical	3	72	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCCGGGTGCAGTGACTC	-16	True	NA	NA	False	AAAACA	-19	NA	3305477	3309485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_3305644_3308312
transcript_64039.known	chr16	-	3421	2	FSM	ENSG00000140993.11	ENST00000396862.2	3421	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTGTTTCATAA	1	True	NA	1	True	TATAAA	-44	NA	3305430	3298807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3302010_3305211
transcript_64040.known	chr16	-	801	2	FSM	ENSG00000140993.11	ENST00000574598.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAAGATTCGGTACAAC	1559	False	NA	NA	False	AATAAA	-44	NA	3303872	3301322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3302010_3303758
transcript_64041.known	chr16	-	594	2	FSM	ENSG00000140993.11	ENST00000572297.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCTGAGAATGGTAAAG	360	False	NA	NA	False	AATAAA	-20	NA	3305071	3301493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3302010_3304993
transcript_64044.known	chr16	-	3108	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	10.3225750448013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-13	True	NA	-4	True	AATAAA	-17	NA	3401004	3382084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_64045.nic	chr16	-	3179	7	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	17.5309250564063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	87	False	NA	-4	True	AATAAA	-17	NA	3401025	3382084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3383712_3384458_3384942_3390009_3390184_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_64055.nic	chr16	-	2910	5	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	19.8289560996034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	87	False	NA	-4	True	AATAAA	-17	NA	3401025	3382084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3383712_3384458_3384942_3393648_3393815_3397191_3397745_3400944
transcript_64056.known	chr16	-	906	5	FSM	ENSG00000140987.21	ENST00000571906.1	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	21.6029511872799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTACAGGGCCATGGCG	15	True	NA	NA	False	NA	NA	NA	3400976	3384839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3384942_3390009_3390134_3390422_3390518_3397191_3397745_3400944
transcript_64058.known	chr16	-	2441	4	FSM	ENSG00000140987.21	ENST00000576500.5	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	17.6320415405843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAACAGAAAGAAG	-4	True	NA	NA	False	NA	NA	NA	3400995	3382357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3383712_3384458_3384942_3397191_3397745_3400944
transcript_64061.known	chr16	-	1746	3	FSM	ENSG00000140987.21	ENST00000439568.2	1746	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTCCTTTCCTGGAA	-3	True	NA	NA	False	NA	NA	NA	3400994	3382498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3383712_3384458_3384942_3400944
transcript_64062.nic	chr16	-	3491	3	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_1	21.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	87	False	NA	-4	True	AATAAA	-17	NA	3401025	3382084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3384942_3397191_3397745_3400944
transcript_64063.known	chr16	+	1068	4	FSM	ENSG00000103343.13	ENST00000575752.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	33.6286914537109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTCCTCCTCTGTG	10	True	NA	7	True	AATAAA	-19	NA	3401234	3405043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3404908
transcript_64064.known	chr16	+	1586	4	FSM	ENSG00000103343.13	ENST00000571936.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	34.4125300177453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTTGCATGTAAATCA	10	True	NA	NA	False	NA	NA	NA	3401234	3408973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3408320
transcript_64065.known	chr16	+	1557	3	FSM	ENSG00000103343.13	ENST00000344823.9	1557	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	28.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCTCAAATCTATTTCC	19	True	NA	43	True	NA	NA	NA	3401243	3405079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3402407_3404425_3404649_3404908
transcript_64068.known	chr16	+	2459	3	FSM	ENSG00000103343.13	ENST00000268655.5	2459	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	8.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGGCAAAGTTAATTG	-10	True	NA	20	True	AATAAA	-20	NA	3401214	3409364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3402407_3404425_3404649_3408320
transcript_64070.known	chr16	+	1002	2	FSM	ENSG00000103343.13	ENST00000572544.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTTAGAGGGGCCTG	749	False	NA	-42	True	NA	NA	NA	3401973	3404994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3402407_3404425
transcript_64072.known	chr16	-	5483	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.35702260395516	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAACTTTTTAAAAA	-26	True	NA	NA	False	ATTAAA	-23	NA	3443504	3432413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
transcript_64077.known	chr16	+	4083	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	10.8025096563731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	11	True	NA	NA	False	AATACA	-23	NA	3501003	3539048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
transcript_64089.known	chr16	+	2656	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	144.772164423403	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	-9	True	NA	14	True	AATAAA	-16	NA	3443679	3486953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_64091.known	chr16	+	3142	8	FSM	ENSG00000122390.19	ENST00000649205.1	3142	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	159.470552588423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTCTGTCTCATTACGA	5	True	NA	-30	True	NA	NA	NA	3443693	3486909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3443838_3447481_3447621_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_64098.known	chr16	+	818	7	FSM	ENSG00000122390.19	ENST00000572757.5	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	156.472219756593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACAACACAGCAATAAAC	-40	True	NA	-9	True	NA	NA	NA	3443648	3483449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3443828_3447481_3447621_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362
transcript_64103.known	chr16	+	2531	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	121.4780501435	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3	True	NA	13	True	AATAAA	-15	NA	3458077	3486952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_64104.known	chr16	+	2619	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	137.7672150969	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	-22	True	NA	13	True	AATAAA	-15	NA	3458011	3486952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_64105.nic	chr16	+	746	7	ISM	ENSG00000103351.13	ENST00000341633.9	1643	13	-27	16573	3	-3210	5prime_fragment	FALSE	canonical	3	63	junction_6	12.7758452644912	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAACTGGAAAGAAATCG	-8	True	NA	NA	False	NA	NA	NA	3500984	3519986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902
transcript_64109.known	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	130.752590796512	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	11	True	NA	-25	True	NA	NA	NA	3458044	3486914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_64113.known	chr16	+	1045	6	FSM	ENSG00000122390.19	ENST00000421765.7	1045	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_4	141.396746780115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTGCCCTCACTGGGC	NA	False	NA	NA	False	NA	NA	NA	3457984	3485578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484690_3485084_3485466
transcript_64114.known	chr16	+	833	6	FSM	ENSG00000122390.19	ENST00000570819.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	121.682537777612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCGCTGCCTGTTCTTG	17	False	NA	NA	False	NA	NA	NA	3458129	3485604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485062_3485466
transcript_64115.known	chr16	+	1089	6	FSM	ENSG00000122390.19	ENST00000572942.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	138.281741383308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGTGGCCCCCACTC	3	True	NA	NA	False	NA	NA	NA	3458077	3485786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485084_3485466
transcript_64116.nic	chr16	+	2488	6	NIC	ENSG00000122390.19	novel	2531	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	142.333973456796	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3	False	NA	14	True	AATAAA	-16	NA	3458005	3486953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_64117.known	chr16	+	2522	6	FSM	ENSG00000122390.19	ENST00000360862.9	2522	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	147.199184780351	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	NA	False	NA	13	True	AATAAA	-15	NA	3457992	3486952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_6412.known	chr1	+	2207	12	FSM	ENSG00000142910.16	ENST00000271064.12	2207	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	8.02063454549556	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTGTCTTGGAACCTC	-1	True	NA	6	True	AATAAA	-17	NA	31576514	31587686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31576596_31577133_31577459_31579203_31579268_31583148_31583242_31583460_31583576_31584677_31584802_31584885_31585037_31585150_31585341_31585439_31585486_31585752_31585877_31586709_31586756_31586838
transcript_64120.known	chr16	+	3899	5	FSM	ENSG00000122390.19	ENST00000648681.1	3899	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	28.1813324738203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCACCCTGCCCCAC	-8	True	NA	-98	True	NA	NA	NA	3458104	3486841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362
transcript_64122.known	chr16	+	1124	5	FSM	ENSG00000122390.19	ENST00000577013.6	1124	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	158.692312353182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAGCACAGCCCAGAGG	-22	True	NA	NA	False	NA	NA	NA	3458011	3485190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_64155.known	chr16	-	2223	18	FSM	ENSG00000126602.11	ENST00000246957.10	2223	18	0	0	0	0	multi-exon	FALSE	canonical	3	1360	junction_11	133.174703792063	5111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTGGGCTTTTTTT	3	True	NA	-5	True	TTTAAA	-18	NA	3717524	3658036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3690826_3690986_3717420
transcript_6417.nic	chr1	+	1883	11	NIC	ENSG00000142910.16	novel	2207	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	18.4035322696487	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTACAGTGTCTTGGAA	-6	True	NA	2	True	AATAAA	-13	NA	31576509	31587682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_31576596_31579203_31579268_31583148_31583242_31583460_31583576_31584677_31584802_31584885_31585037_31585150_31585341_31585439_31585486_31585752_31585877_31586709_31586756_31586838
transcript_64176.known	chr16	-	2052	17	FSM	ENSG00000126602.11	ENST00000538171.5	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	426.78857104543	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTTGGGCTTTTTT	14	True	NA	-6	True	TTTAAA	-17	NA	3717513	3658037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3717420
transcript_642.nic	chr1	-	3215	9	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	45	junction_8	12.3686852575365	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-12	True	NA	-16	True	TATAAA	-16	NA	1116107	1081822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_6421.nnic	chr1	+	1759	10	NIC	ENSG00000142910.16	novel	2207	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	25.5057485653047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTACAGTGTCTTGGAA	-6	True	NA	2	True	AATAAA	-13	NA	31576509	31587682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_31576596_31579203_31579268_31583148_31583242_31583460_31583576_31584677_31584802_31584885_31585037_31585150_31585341_31585439_31585486_31586709_31586756_31586838
transcript_64235.known	chr16	-	318	2	FSM	ENSG00000263105.1	ENST00000573220.1	318	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTCAGGCATGTCCA	450	False	NA	NA	False	CATAAA	-27	NA	4183515	4180116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4180312_4183392
transcript_64237.known	chr16	-	1903	4	FSM	ENSG00000262468.7	ENST00000573042.2	1903	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCACTTTGGGAGGC	-22	True	NA	NA	False	AAGAAA	-27	NA	4253817	4245900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4246861_4246972_4247062_4251321_4252035_4253676
transcript_64239.known	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	4.29793231940921	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	17	True	NA	-5	True	AATAAA	-20	NA	4273023	4257185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
transcript_64245.known	chr16	-	595	4	FSM	ENSG00000090447.12	ENST00000574639.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.4276973520408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCGTGAAGCCTGTC	-26	True	NA	NA	False	NA	NA	NA	4272894	4258188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4272657
transcript_64260.known	chr16	-	533	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_4	142.967435103243	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-10	True	NA	-9	True	AATAAA	-14	NA	4351321	4340250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
transcript_64261.known	chr16	-	606	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	320.10193688886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4	True	NA	-9	True	AATAAA	-14	NA	4351315	4340250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
transcript_64262.known	chr16	-	650	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	292.769000237389	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4	True	NA	-9	True	AATAAA	-14	NA	4351270	4340250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
transcript_64263.known	chr16	-	353	4	FSM	ENSG00000217930.8	ENST00000571178.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	370.7086307181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGGCTCCCCCCGCCCA	18	True	NA	-76	True	AAAAAG	-22	NA	4351293	4340317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4351231
transcript_64266.known	chr16	+	2816	2	FSM	ENSG00000168140.5	ENST00000304735.4	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGGTAGAAGGGCTG	0	True	NA	42	True	AATAAA	-26	NA	4371847	4383538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4371994_4380868
transcript_64267.known	chr16	-	3284	31	FSM	ENSG00000103426.12	ENST00000572467.5	3284	31	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	186.745129342999	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-3	True	NA	-9	True	AATAAA	-14	NA	4416587	4340250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_64268.known	chr16	-	3472	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	14.8448769065415	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGCTGCTGTGGTC	-12	True	NA	-4	True	ATTAAA	-18	NA	4416596	4354541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_64269.known	chr16	-	340	4	FSM	ENSG00000262686.1	ENST00000576080.1	340	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGCTGAATGAATCGTCG	NA	False	NA	NA	False	AATAAA	-1	NA	4328340	4324666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4324776_4325269_4325355_4326429_4326495_4328259
transcript_6427.known	chr1	+	1841	11	FSM	ENSG00000142910.16	ENST00000537531.2	1841	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.1049745088125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTACAGTGTCTTGGAA	27	False	NA	2	True	AATAAA	-13	NA	31578144	31587682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31578189_31579203_31579268_31583148_31583242_31583460_31583576_31584677_31584802_31584885_31585037_31585150_31585341_31585439_31585486_31585752_31585877_31586709_31586756_31586838
transcript_64270.known	chr16	-	674	6	FSM	ENSG00000217930.8	ENST00000571941.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	352.784353394535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	5407	False	NA	-9	True	AATAAA	-14	NA	4345904	4340250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4343482_4343595_4345785
transcript_64275.known	chr16	+	2700	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	152.864440567722	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	-2	True	NA	17	True	AAAAAG	-17	NA	4425867	4456775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
transcript_64283.known	chr16	+	2591	11	FSM	ENSG00000103423.14	ENST00000355296.8	2591	11	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	62.4695926031217	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	-10	True	NA	17	True	AAAAAG	-17	NA	4425859	4456775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545
transcript_6429.known	chr1	-	5418	71	FSM	ENSG00000084636.18	ENST00000373672.8	5418	71	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_63	12.9182989971432	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTATTTCCCTCCTTGCCT	-5	True	NA	NA	False	AATAAA	-15	NA	31704017	31652262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656399_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036_31666082_31667574_31667629_31668164_31668219_31668801_31668856_31670601_31670647_31671614_31671660_31672415_31672503_31672595_31672638_31672723_31672841_31675006_31675040_31675257_31675312_31679631_31679686_31679803_31679852_31680041_31680102_31680904_31680932_31681022_31681068_31682933_31683003_31683193_31683248_31683333_31683370_31683706_31683749_31683949_31684004_31684108_31684232_31684522_31684631_31684820_31684857_31685638_31685771_31686090_31686136_31686243_31686280_31688466_31688503_31688860_31688972_31689049_31689086_31689740_31689852_31690366_31690394_31690528_31690574_31691187_31691227_31691416_31691513_31691597_31691643_31692004_31692068_31692473_31692510_31692597_31692643_31692766_31692809_31693091_31693155_31694143_31694171_31695185_31695222_31695760_31695788_31696087_31696142_31696962_31697089_31697219_31697301_31697905_31698173_31698482_31698607_31699812_31699931_31700040_31700116_31702120_31702228_31703836
transcript_64294.known	chr16	+	403	3	FSM	ENSG00000103423.14	ENST00000573120.5	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	80	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAT	178	False	NA	NA	False	NA	NA	NA	4426047	4437625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4426093_4434383_4434518_4437401
transcript_64302.known	chr16	+	1797	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	212.998435049024	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCGCTGTGTAAATGCT	1617	False	NA	-39	True	NA	NA	NA	4476339	4510295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_64321.known	chr16	+	1727	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	189.877434151613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	22	False	NA	12	True	AATAAA	-17	NA	4474702	4510346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_64323.known	chr16	+	1673	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	53.4475443776419	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	-12	True	NA	13	True	AATAAA	-18	NA	4476397	4510347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_64328.known	chr16	-	1240	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	174.487134196192	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTTCCAGGAGAAGA	-41	True	NA	-22	True	AATAAA	-15	NA	4474643	4461694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
transcript_64362.nic	chr16	-	1395	4	ISM	ENSG00000153406.14	ENST00000404295.7	1233	6	-14	3854	7	615	5prime_fragment	FALSE	canonical	3	360	junction_3	73.0722625594388	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGACGAGGAGAGGATT	-34	True	NA	NA	False	AAAACA	-31	NA	4474636	4465547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_4466403_4469226_4469466_4474092_4474167_4474409
transcript_64364.known	chr16	-	1092	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	159.787859363595	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-23	True	NA	-21	True	AATAAA	-16	NA	4474625	4461693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
transcript_64377.known	chr16	-	2774	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_5	62.7330853696835	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATATGTGCTTTTTTA	9	True	NA	26	True	AATGAA	-10	NA	4538470	4510674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
transcript_64378.known	chr16	-	2706	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	233.490556554221	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTTTTTAAAACCC	7	True	NA	32	True	AATACA	-3	NA	4538773	4510668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_64397.known	chr16	-	799	3	FSM	ENSG00000153443.13	ENST00000587615.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTTCCTTCGAAGACG	11	True	NA	NA	False	NA	NA	NA	4614872	4609367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609909_4610492_4610556_4614677
transcript_64398.known	chr16	-	1374	3	FSM	ENSG00000153443.13	ENST00000283474.12	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	8.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGGCTCTGTGGTCTT	-5	True	NA	-6	True	NA	NA	NA	4614888	4608883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609984_4610492_4610556_4614677
transcript_64399.known	chr16	-	1275	3	FSM	ENSG00000153443.13	ENST00000591897.5	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	7	True	NA	-5	True	NA	NA	NA	4615027	4608882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609984_4610492_4610556_4614916
transcript_64400.known	chr16	-	1462	3	FSM	ENSG00000153443.13	ENST00000590965.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	9	True	NA	-5	True	NA	NA	NA	4614874	4608882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609984_4610492_4610657_4614677
transcript_64401.known	chr16	-	2641	1	FSM	ENSG00000153443.13	ENST00000590891.1	2641	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	3511	False	NA	-5	True	NA	NA	NA	4611523	4608882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4608900_4611500
transcript_64403.known	chr16	+	1898	18	FSM	ENSG00000102858.13	ENST00000587747.5	1898	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	90.8444809726127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGCCTCCACTTGGT	1	True	NA	NA	False	NA	NA	NA	4624845	4688843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4672399_4672517_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
transcript_64404.nic	chr16	+	4024	18	NIC	ENSG00000102858.13	novel	6425	17	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_16	76.7714443740658	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	69	False	NA	55	True	AATAAA	-13	NA	4624776	4690972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258_4686304_4688795
transcript_64407.known	chr16	+	6425	17	FSM	ENSG00000102858.13	ENST00000399577.9	6425	17	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_16	70.6017660898083	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	23	True	NA	55	True	AATAAA	-13	NA	4624867	4690972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258
transcript_64409.known	chr16	+	3930	17	FSM	ENSG00000102858.13	ENST00000262370.12	3930	17	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_12	60.0279882638091	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	-19	True	NA	55	True	AATAAA	-13	NA	4624825	4690972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
transcript_64411.known	chr16	+	1841	17	FSM	ENSG00000102858.13	ENST00000586183.5	1841	17	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_15	66.8372264815799	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTTGATCAAAGAGCA	116	False	NA	-30	True	NA	NA	NA	4624960	4689039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258_4686304_4688795
transcript_64415.known	chr16	+	6405	16	FSM	ENSG00000102858.13	ENST00000415496.5	6405	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_15	56.0080946530648	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGCTCCTTCCTCC	-21	True	NA	57	True	AATAAA	-15	NA	4624823	4690974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258
transcript_64417.known	chr16	+	1665	16	FSM	ENSG00000102858.13	ENST00000588994.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_15	38.3900450059069	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGCCGAGCTGGCAG	116	False	NA	NA	False	NA	NA	NA	4624960	4688908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
transcript_64437.known	chr16	+	1349	3	FSM	ENSG00000168101.14	ENST00000304301.10	1349	3	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_2	54.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCTGTGTGTTTGTTT	-3	True	NA	28	True	AATAAA	-32	NA	4693693	4695859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4693880_4693977_4694239_4694957
transcript_64438.known	chr16	+	2040	2	FSM	ENSG00000168101.14	ENST00000405142.1	2040	2	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTGCCCTGTGTGTTT	1	True	NA	24	True	AATAAA	-28	NA	4693717	4695855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4693880_4693977
transcript_64446.known	chr16	-	2772	18	FSM	ENSG00000168096.15	ENST00000304283.9	2772	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	52.1682134191835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGCTCAGTTCTGGT	-20	True	NA	-9	True	AATAAA	-16	NA	4734271	4696510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4729979_4730152_4731511_4731580_4733937
transcript_64454.nic	chr16	-	2400	17	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	52.5686678901986	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	-23	True	NA	-10	True	AATAAA	-15	NA	4734274	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4717442_4717554_4724749_4724832_4726658_4726781_4729979_4730152_4734155
transcript_64456.nic	chr16	-	2618	17	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_14	39.2897887497502	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	3563	False	NA	-10	True	AATAAA	-15	NA	4734404	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4729979_4730152_4734155
transcript_64458.known	chr16	-	2302	17	FSM	ENSG00000168096.15	ENST00000592077.5	2302	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	49.8146564777877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	3748	False	NA	-10	True	AATAAA	-15	NA	4734219	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4731511_4731580_4734155
transcript_64460.nic	chr16	-	2559	17	NIC	ENSG00000168096.15	novel	2772	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	41.9631069363316	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	-20	True	NA	-10	True	AATAAA	-15	NA	4734271	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726855_4726978_4727178_4729979_4730152_4734155
transcript_64477.known	chr16	-	1946	16	FSM	ENSG00000168096.15	ENST00000585773.5	1946	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	48.508235268755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGAGTGAGGAGGACAG	2	True	NA	NA	False	NA	NA	NA	4734249	4696856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4734155
transcript_64479.nic	chr16	-	2419	16	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	36.8952872630397	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	3563	False	NA	-10	True	AATAAA	-15	NA	4734404	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4734155
transcript_64482.known	chr16	-	2291	16	FSM	ENSG00000168096.15	ENST00000590193.5	2291	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	42.5792855219009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	3768	False	NA	-10	True	AATAAA	-15	NA	4734199	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726978_4727178_4729979_4730152_4734155
transcript_64499.known	chr16	-	2272	15	FSM	ENSG00000168096.15	ENST00000450067.6	2272	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	40.2518221161908	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	3590	False	NA	-8	True	AATAAA	-17	NA	4734377	4696509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4729979_4730152_4734155
transcript_6450.known	chr1	-	865	5	FSM	ENSG00000162517.13	ENST00000489164.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	125.982141591576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTACTGCCCACGCTCT	584	False	NA	NA	False	NA	NA	NA	31644589	31630788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644379
transcript_6451.known	chr1	-	1614	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	0	0	0	multi-exon	TRUE	canonical	3	241	junction_4	23.0366555732381	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGTTTTCCACCATG	2	True	NA	-20	True	AATAAA	-17	NA	31644876	31629865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
transcript_64512.nic	chr16	-	2156	14	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	41.0593451297656	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	3622	False	NA	-10	True	AATAAA	-15	NA	4734345	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4729979_4730152_4734155
transcript_6452.known	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	131.362940825113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	277	False	NA	NA	False	NA	NA	NA	31644896	31630448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
transcript_64524.nnic	chr16	-	2079	13	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_11	41.9671663989309	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	3563	False	NA	-10	True	AATAAA	-15	NA	4734404	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4729979_4730152_4734155
transcript_64548.known	chr16	-	5824	6	FSM	ENSG00000103199.14	ENST00000219478.11	5824	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	4.22374241638857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	4767162	4748238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4753059_4760491_4760589_4762270_4762336_4762572_4762757_4765564_4766077_4767016
transcript_64549.nic	chr16	-	3268	6	NIC	ENSG00000103199.14	novel	5824	6	NA	NA	15	1	intron_retention	FALSE	canonical	2	4	junction_4	10.5754432531218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTGCAGTGGCTCACG	NA	False	NA	NA	False	AATATA	-43	NA	4767201	4750790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4753059_4760491_4760589_4762270_4762336_4762572_4762714_4765564_4766077_4767016
transcript_64558.known	chr16	-	834	2	FSM	ENSG00000168096.15	ENST00000590689.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATCCCTGGCCTTC	3772	False	NA	NA	False	AAAAAG	-7	NA	4734195	4729357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4730152_4734155
transcript_64560.known	chr16	-	2397	1	FSM	ENSG00000103199.14	ENST00000591026.1	2397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCAGTGGCTCAC	NA	False	NA	NA	False	AATATA	-42	NA	4753188	4750791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4750800_4753200
transcript_64561.known	chr16	-	2187	6	FSM	ENSG00000168096.15	ENST00000591185.5	2187	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	12.8436754864019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	798	False	NA	-10	True	AATAAA	-15	NA	4700170	4696511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799
transcript_64562.known	chr16	-	1418	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	0	0	0	0	multi-exon	TRUE	canonical	3	392	junction_2	19.8343137012602	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	13	True	NA	-6	True	AATAAA	-16	NA	4802633	4796967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_64564.nnic	chr16	-	1781	11	NNC	ENSG00000067836.13	novel	1418	11	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	116.574268172698	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	NA	False	NA	-6	True	AATAAA	-16	NA	4802975	4796967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_4797502_4797713_4797862_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_64567.nic	chr16	-	1639	10	NIC	ENSG00000067836.13	novel	1418	11	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_9	111.446826162652	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	0	True	NA	-6	True	AATAAA	-16	NA	4802926	4796967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802526
transcript_64569.known	chr16	-	1362	10	FSM	ENSG00000067836.13	ENST00000587843.5	1362	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	126.258993079041	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGAGCCCCTGTCTGTC	13	True	NA	-7	True	AATAAA	-15	NA	4802633	4796968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801502_4801586_4802381_4802454_4802526
transcript_64579.nic	chr16	-	2629	9	NIC	ENSG00000067836.13	novel	1418	11	NA	NA	-95	0	intron_retention	FALSE	canonical	3	392	junction_2	21.8399719551102	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	NA	False	NA	-6	True	AATAAA	-16	NA	4802975	4796967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4801586_4802381_4802454_4802526
transcript_64599.known	chr16	-	2684	7	FSM	ENSG00000067836.13	ENST00000591292.5	2684	7	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_2	24.7975133161909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGAGCCCCTGTCTGTC	7	True	NA	-7	True	AATAAA	-15	NA	4802162	4796968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497
transcript_64605.known	chr16	+	6443	18	FSM	ENSG00000118900.15	ENST00000262376.11	6443	18	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	9.79478005179166	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTCCTGTAGGAGCT	6	True	NA	62	True	AAAACA	-40	NA	4847480	4882401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4848211_4852878_4853167_4857989_4858077_4858567_4858664_4859024_4859160_4859864_4859969_4860663_4861103_4868832_4868904_4870211_4870342_4870515_4870635_4870843_4870973_4871154_4871302_4872883_4872935_4873030_4873074_4874210_4875435_4876870_4877112_4877384_4877475_4880082
transcript_64617.nic	chr16	-	3428	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_1	162.235349396332	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	5616	False	NA	-7	True	AATAAA	-19	NA	4847371	4803202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_64632.known	chr16	-	1831	16	FSM	ENSG00000140632.17	ENST00000591451.5	1831	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	170.477238624072	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGTCAGCAGGATTGG	23	True	NA	NA	False	NA	NA	NA	4847265	4805048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_64643.known	chr16	-	3466	15	FSM	ENSG00000140632.17	ENST00000436648.9	3466	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	204.248248312624	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	9	True	NA	-7	True	AATAAA	-19	NA	4847279	4803202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_64646.nic	chr16	-	3750	15	NIC	ENSG00000140632.17	novel	3718	16	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_8	197.602931069726	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	5616	False	NA	-7	True	AATAAA	-19	NA	4847371	4803202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_64701.known	chr16	+	2305	5	FSM	ENSG00000118900.15	ENST00000592120.5	2305	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	47.087684164758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAGAAAAGAAGAAAAA	-1	True	NA	NA	False	NA	NA	NA	4846664	4859129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4848394_4852878_4853167_4857989_4858077_4858567_4858664_4859024
transcript_64703.known	chr16	-	6251	22	FSM	ENSG00000118898.16	ENST00000345988.7	6251	22	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	8.05114039611809	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTCTTCTTTTGCA	-7	True	NA	0	True	AATAAA	-30	NA	4937148	4882506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4886048_4887134_4887228_4888101_4888219_4888977_4889062_4890183_4890335_4890727_4890922_4891810_4891950_4892034_4892214_4893212_4893371_4893540_4893639_4894466_4894619_4895260_4895408_4895593_4895717_4897674_4897771_4899012_4899121_4899222_4899385_4900829_4900872_4900963_4901090_4902405_4902527_4903885_4904041_4910849_4910950_4936983
transcript_64708.nic	chr16	-	2504	16	ISM	ENSG00000118898.16	ENST00000345988.7	6251	22	-65	8936	-65	0	5prime_fragment	FALSE	canonical	3	85	junction_9	8.28385310240484	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGCATAAAGCACATA	-3	True	NA	NA	False	NA	NA	NA	4937213	4891442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_4891950_4892034_4892214_4893212_4893371_4893540_4893639_4894466_4894619_4895260_4895408_4895593_4895717_4897674_4897771_4899012_4899121_4899222_4899385_4900829_4900872_4900963_4901090_4902405_4902527_4903885_4904041_4910849_4910950_4936983
transcript_6471.nnic	chr1	-	1902	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	735.384876555581	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTTTTAGATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31938382	31908262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938075_31938254
transcript_6472.nnic	chr1	-	1920	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	735.384876555581	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTTTTAGATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31938402	31908262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938081_31938262
transcript_64725.known	chr16	+	3900	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_12	21.5450110234365	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	9	True	NA	11	True	GATAAA	-18	NA	5071842	5087379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_64729.known	chr16	+	1419	13	FSM	ENSG00000033011.14	ENST00000544428.1	1419	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	87.7879389336725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTTCTTCTCTGGAGG	414	False	NA	33	True	NA	NA	NA	5072247	5085057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072304_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_64732.known	chr16	+	3053	12	FSM	ENSG00000033011.14	ENST00000683772.1	3053	12	0	0	0	0	multi-exon	TRUE	canonical	3	281	junction_11	22.3136914571812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCAGTTTGTGGTTCCTG	NA	False	NA	-73	True	NA	NA	NA	5071805	5085487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5083758_5084749
transcript_64735.known	chr16	+	1952	12	FSM	ENSG00000033011.14	ENST00000684335.1	1952	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	90.0556301900421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGGAAATTAACATTC	NA	False	NA	-55	True	NA	NA	NA	5071805	5085505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5082558_5082674_5083681_5083758_5084749
transcript_64738.known	chr16	+	2051	12	FSM	ENSG00000033011.14	ENST00000684190.1	2051	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	91.3930753114044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	NA	False	NA	-28	True	NA	NA	NA	5071805	5085532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_64747.known	chr16	-	2260	11	FSM	ENSG00000103174.13	ENST00000562746.5	2260	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	21.1397729410701	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCAGGTGGTGTGTGG	13	True	NA	-26	True	AATAAA	-17	NA	5033918	5024871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028296_5028399_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_64752.known	chr16	-	2203	10	FSM	ENSG00000103174.13	ENST00000312251.8	2203	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	5.93379107680831	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	-4	True	NA	2	True	AATAAA	-45	NA	5033935	5024843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_64769.known	chr16	-	2100	9	FSM	ENSG00000103174.13	ENST00000381955.7	2100	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.7476677480776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	-3	True	NA	2	True	AATAAA	-45	NA	5033934	5024843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5025686_5027134_5027199_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_64776.nic	chr16	-	2451	9	NIC	ENSG00000118894.15	novel	2397	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_8	107.807046963545	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-1	True	NA	NA	False	AATAAA	-17	NA	5097795	5084303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279_5097354_5097643
transcript_64789.known	chr16	-	1360	8	FSM	ENSG00000153446.16	ENST00000472572.8	1360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.9488706664723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	-12	True	NA	-1	True	AATAAA	-17	NA	5065956	5044121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492_5058611_5060285_5060437_5062424_5062575_5065700
transcript_64790.nic	chr16	-	2742	8	NIC	ENSG00000118894.15	novel	2397	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	147	junction_7	84.5337754017497	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-2	False	NA	NA	False	AATAAA	-17	NA	5097796	5084303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279
transcript_64791.known	chr16	-	2397	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	60.4243497343275	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-1	True	NA	NA	False	AATAAA	-37	NA	5097795	5084283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
transcript_64796.known	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	131.445185285327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	28	False	NA	NA	False	NA	NA	NA	5097766	5085362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
transcript_64798.nic	chr16	-	1683	8	NIC	ENSG00000118894.15	novel	2397	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	147	junction_7	84.5337754017497	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	-2	False	NA	NA	False	NA	NA	NA	5097796	5085362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279
transcript_648.known	chr1	-	1083	5	FSM	ENSG00000186891.14	ENST00000379268.7	1083	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGGATGCATGCTGG	-16	True	NA	-4	True	AATAAA	-15	NA	1206592	1203507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1203969_1204033_1204237_1204398_1204487_1205369_1205493_1206384
transcript_6480.nnic	chr1	-	1512	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	735.384876555581	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAGAAAAGGAATTAA	NA	False	NA	-26	True	AATAAA	-15	NA	31938382	31908652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938075_31938254
transcript_6481.nnic	chr1	-	1530	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	735.384876555581	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAGAAAAGGAATTAA	NA	False	NA	-26	True	AATAAA	-15	NA	31938402	31908652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938081_31938262
transcript_64810.known	chr16	-	2268	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	93.5546483196972	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	6	False	NA	NA	False	AATAAA	-17	NA	5097788	5084303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
transcript_64830.known	chr16	-	873	6	FSM	ENSG00000118894.15	ENST00000587133.1	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	135.326272393796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGGAAAGCGGATAAA	52	False	NA	NA	False	NA	NA	NA	5097742	5085571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5095451_5095515_5097643
transcript_64842.nic	chr16	-	1914	5	ISM	ENSG00000153446.16	ENST00000472572.8	1360	8	6235	0	-1101	0	3prime_fragment	FALSE	canonical	3	17	junction_2	4.26468052730799	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	6309	False	NA	-1	True	AATAAA	-17	NA	5059721	5044121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492
transcript_64847.known	chr16	+	2265	2	FSM	ENSG00000033011.14	ENST00000632058.1	2265	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	111	False	NA	NA	False	NA	NA	NA	5033701	5043999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5034062_5042094
transcript_64849.known	chr16	-	945	4	FSM	ENSG00000232258.7	ENST00000620492.5	1618	4	673	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGCTTTACAGATTGC	673	False	NA	0	True	AATAAA	-19	NA	8589838	8569499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8570006_8572086_8572225_8589212_8589294_8589618
transcript_64856.known	chr16	+	1312	12	FSM	ENSG00000067365.15	ENST00000561758.5	1312	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.5611500267456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGTAAAATCAGAAGCT	5	True	NA	-10	True	NA	NA	NA	8621728	8646191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8628877_8629044_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_64862.nic	chr16	+	1806	12	NIC	ENSG00000067365.15	novel	1312	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	7	junction_1	70.1645056366798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	-2	True	NA	17	True	AGTAAA	-18	NA	8621695	8646218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_8621776_8623852_8624119_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_64865.known	chr16	+	4974	11	FSM	ENSG00000067365.15	ENST00000381920.8	4974	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	34.0189652987859	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGG	0	True	NA	NA	False	AATACA	-17	NA	8621697	8649654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_6487.nnic	chr1	-	1809	6	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	924.539366387392	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTTTTAGATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31938382	31908262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31918969_31919659_31937986_31938075_31938254
transcript_64870.nnic	chr16	+	1385	10	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	24	junction_9	59.845067455601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	-16	True	NA	17	True	AGTAAA	-18	NA	8621681	8646218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_64875.known	chr16	+	1510	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	45.8693797647189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	-7	True	NA	23	True	AGTAAA	-24	NA	8621690	8646224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_64882.nnic	chr16	+	1398	9	NIC	ENSG00000067365.15	novel	1510	10	NA	NA	-55	0	intron_retention	FALSE	canonical	3	24	junction_8	69.9820289431508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	NA	False	NA	17	True	AGTAAA	-18	NA	8621627	8646218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_64889.known	chr16	+	4779	16	FSM	ENSG00000183044.12	ENST00000268251.13	4779	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	3.80992854992788	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGAATGTGGACTTT	0	True	NA	9	True	AATAAA	-15	NA	8674616	8784570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8674712_8735698_8735810_8746000_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8764068_8764150_8764737_8764831_8766207_8766271_8768192_8768257_8768824_8768974_8772779_8772918_8774889_8775058_8776343_8776491_8779478_8779591_8781308
transcript_64896.known	chr16	+	2285	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	38.2425129393763	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCATTCCGATT	-7	True	NA	25	True	ATTAAA	-15	NA	8797838	8849325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_64897.known	chr16	+	567	7	FSM	ENSG00000140650.13	ENST00000564069.1	567	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	126.421802796125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGACCATTTATTTCTT	66	False	NA	NA	False	NA	NA	NA	8797911	8813067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811641_8811714_8812990
transcript_64899.known	chr16	+	986	7	FSM	ENSG00000140650.13	ENST00000566604.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	128.223329477214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCCCCATCATTCTAG	-9	True	NA	NA	False	NA	NA	NA	8797836	8848124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_649.known	chr1	-	705	5	FSM	ENSG00000186891.14	ENST00000379265.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	2.58602010819715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCGTCCTCCGGGGC	5	True	NA	NA	False	NA	NA	NA	1206571	1203843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1203969_1204054_1204237_1204398_1204487_1205369_1205493_1206384
transcript_64902.known	chr16	+	931	7	FSM	ENSG00000140650.13	ENST00000562318.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	127.195387757051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCCACCCACCCCC	-4	True	NA	NA	False	NA	NA	NA	8797841	8848051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_64907.known	chr16	+	1557	6	FSM	ENSG00000140650.13	ENST00000566540.5	1557	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	174.859257690292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCTATCTGCACTCAC	-4	True	NA	NA	False	NA	NA	NA	8797841	8848777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_64908.known	chr16	+	793	6	FSM	ENSG00000140650.13	ENST00000565221.5	793	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	135.529480187891	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAATGCCTCGCACAAA	21	True	NA	NA	False	NA	NA	NA	8797866	8848030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_64915.known	chr16	+	1002	5	FSM	ENSG00000140650.13	ENST00000570076.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	158.557560526138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAAGCTCCCGCCTGCA	4	True	NA	NA	False	NA	NA	NA	8797849	8848322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8811637_8811714_8812990_8813107_8847723
transcript_64919.known	chr16	-	556	5	FSM	ENSG00000153048.11	ENST00000565287.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	1351.04163518376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGGCACCAAGCATGAG	2	True	NA	NA	False	NA	NA	NA	8869006	8855213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8860104_8860219_8868965
transcript_64928.known	chr16	-	681	5	FSM	ENSG00000153048.11	ENST00000570125.5	681	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1372.04418660625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGTCATCACTCACCTGG	-12	True	NA	NA	False	TATAAA	-45	NA	8868719	8855233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048_8868161_8868531
transcript_64932.known	chr16	-	565	4	FSM	ENSG00000153048.11	ENST00000567908.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1298.03090187492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATCACTCACCTGGCAC	1293	False	NA	NA	False	NA	NA	NA	8867887	8855230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8867706
transcript_64933.known	chr16	-	3026	4	FSM	ENSG00000153048.11	ENST00000396593.6	3026	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	1290.52159997421	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	779	False	NA	-27	True	AATAAA	-22	NA	8868401	8852941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048
transcript_64935.known	chr16	-	2709	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1731	junction_3	494.741908024331	1915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATGCGTGTGTTTGTGT	2	True	NA	-32	True	AATAAA	-17	NA	8869006	8852946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
transcript_64954.known	chr16	-	1439	2	FSM	ENSG00000184857.8	ENST00000333050.7	1439	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTACGTTATTTTATA	1	True	NA	1	True	AATAAA	-16	NA	8797639	8795179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8796591_8797611
transcript_64956.known	chr16	-	1913	2	FSM	ENSG00000153048.11	ENST00000563815.5	1913	2	0	0	0	0	multi-exon	FALSE	canonical	3	1731	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCG	2	True	NA	NA	False	AATACA	-10	NA	8869006	8857463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8859336_8868965
transcript_64957.known	chr16	-	5831	31	FSM	ENSG00000187555.16	ENST00000344836.9	5831	31	0	0	0	0	multi-exon	FALSE	canonical	2	331	junction_30	79.3211755390002	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTGTAATGTTTCC	15	True	NA	-3	True	ATTAAA	-17	NA	8963906	8892096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8894105_8894549_8894641_8894783_8894856_8895030_8895151_8895641_8895742_8896998_8897100_8898359_8898438_8898530_8898640_8899120_8899189_8899603_8899758_8900529_8900631_8900989_8901058_8901141_8901235_8902081_8902188_8902380_8902483_8903267_8903403_8904434_8904566_8905186_8905332_8906425_8906583_8908340_8908451_8910744_8910828_8915253_8915345_8915444_8915526_8916501_8916557_8917025_8917157_8919030_8919140_8920358_8920448_8921156_8921296_8923214_8923414_8930292_8930398_8963206
transcript_64959.known	chr16	+	5952	4	FSM	ENSG00000182831.12	ENST00000327827.12	5952	4	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_3	10.8730042868667	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTGACTTGTGTTCCT	17	True	NA	NA	False	AATAAA	-36	NA	9091643	9121635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_9092271_9092920_9093002_9102983_9103260_9116667
transcript_64969.known	chr16	+	10359	3	FSM	ENSG00000182831.12	ENST00000574285.2	10359	3	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTGGTTGTTAATCT	564	False	NA	20	True	AATAAA	-21	NA	9092190	9113181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_9092271_9092920_9093002_9102983
transcript_64971.nnic	chr16	-	814	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	29	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676915	9666884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_9667360_9674300_9674398_9676673
transcript_64976.known	chr16	-	660	2	FSM	ENSG00000260362.1	ENST00000561538.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676843	9666884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_9667375_9676673
transcript_6498.known	chr1	+	1989	11	FSM	ENSG00000121774.18	ENST00000484270.2	1989	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	802.424700517126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTCCCACTCTGGTA	318	False	NA	16	True	AATAAA	-16	NA	32014181	32060850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526_32042720_32045330_32045391_32060162
transcript_64989.known	chr16	+	3665	12	FSM	ENSG00000166669.14	ENST00000396560.6	3665	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.7956220082705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTATGTCTTTATTTT	-4	True	NA	11	True	AATAAA	-17	NA	10386054	10483638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10457371_10457530_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
transcript_64993.known	chr16	+	576	3	FSM	ENSG00000166669.14	ENST00000566316.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	-1	True	NA	11	True	AATAAA	-21	NA	10386057	10387741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10386123_10387143_10387291_10387377
transcript_64994.known	chr16	+	559	2	FSM	ENSG00000166669.14	ENST00000570163.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGTATTAGTTCTCAT	1033	False	NA	7	True	AATAAA	-17	NA	10387091	10387737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10387291_10387377
transcript_64995.known	chr16	+	1681	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	2	True	NA	11	True	AATAAA	-21	NA	10386060	10387741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10386100_10387700
transcript_64996.known	chr16	-	5097	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	9.86154146165801	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCCCTCTGCTTCTTT	-7	True	NA	NA	False	GATAAA	-20	NA	10580598	10528421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
transcript_64997.known	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	35.5681036885578	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	6	True	NA	23	True	AATAAA	-16	NA	10743841	10769351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_64999.nic	chr16	+	1162	10	NIC	ENSG00000103274.11	novel	1231	11	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_9	77.5324702986902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	-9	True	NA	23	True	AATAAA	-16	NA	10743826	10769351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10769046
transcript_65000.known	chr16	+	1185	10	FSM	ENSG00000103274.11	ENST00000433392.6	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	84.6138651335554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	19	True	NA	23	True	AATAAA	-16	NA	10743854	10769351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_65004.known	chr16	-	3370	8	FSM	ENSG00000166676.17	ENST00000299866.13	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	11.1976673955802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCGTTTTGTCCAATT	-21	True	NA	0	True	AATAAA	-21	NA	10818794	10766674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10769102_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951_10775097_10818102_10818183_10818484
transcript_65006.nic	chr16	-	1195	8	NIC	ENSG00000166676.17	novel	3256	6	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	10.4744587313276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCGGACCACACCAGCAT	77	False	NA	-18	True	ATTAAA	-18	NA	10818805	10769237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_10769479_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951_10775097_10818102_10818183_10818484
transcript_65015.known	chr16	-	626	3	FSM	ENSG00000182108.11	ENST00000570992.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	120	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGGAGGCTTACTTCT	783	False	NA	-2	True	GATAAA	-14	NA	10941718	10928941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10929075_10929216_10929560_10941568
transcript_65016.known	chr16	-	1393	3	FSM	ENSG00000182108.11	ENST00000469379.5	1393	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGGGCCCTGCCTTTT	370	False	NA	-1	True	ATTAAA	-22	NA	10942131	10928890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10929560_10933843_10934005_10941568
transcript_65018.known	chr16	-	1569	2	FSM	ENSG00000182108.11	ENST00000331808.5	1569	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGGGCCCTGCCTTTT	-4	True	NA	-1	True	ATTAAA	-22	NA	10942468	10928890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10929560_10941568
transcript_65020.known	chr16	-	5854	1	FSM	ENSG00000182108.11	ENST00000570440.2	5854	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTGTTATGAAGTA	4	True	NA	NA	False	ATTAAA	-17	NA	10942460	10936606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10936600_10942500
transcript_65024.nic	chr16	+	6803	24	NIC	ENSG00000038532.16	novel	6812	24	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.0939576750866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTAGCGTGCTGCTCCT	-2	True	NA	28	True	AATAAA	-20	NA	10944524	11182186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972553_10972560_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11166387_11166553_11178334
transcript_65025.known	chr16	+	6812	24	FSM	ENSG00000038532.16	ENST00000409790.6	6812	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.2216206245179	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTAGCGTGCTGCTCCT	-27	True	NA	28	True	AATAAA	-20	NA	10944563	11182186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972553_10972560_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003306_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11166387_11166553_11178334
transcript_65030.nic	chr16	+	3367	22	NIC	ENSG00000038532.16	novel	6812	24	NA	NA	-39	9741	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	10.6855699845957	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCGGTCCAGTTGTT	-2	True	NA	8	True	NA	NA	NA	10944524	11166974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11166387
transcript_65033.known	chr16	+	3365	21	FSM	ENSG00000038532.16	ENST00000409552.4	3365	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	10.7638283152417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCGAAAGAGAGCCTTT	-10	True	NA	NA	False	AGTAAA	-17	NA	10944580	11126787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978
transcript_65039.nic	chr16	+	2174	10	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-56	122798	-39	-20930	5prime_fragment	FALSE	canonical	3	43	junction_7	10.6249183003395	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTAGTATTTTTAAAAT	-2	True	NA	NA	False	NA	NA	NA	10944524	11003989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073
transcript_65045.nic	chr16	+	1024	3	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-56	163711	-39	-61843	5prime_fragment	FALSE	canonical	3	69	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGATCAAGTTGCCAG	-2	True	NA	NA	False	NA	NA	NA	10944524	10963076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_10944798_10957781_10957911_10962454
transcript_65047.known	chr16	+	1427	2	FSM	ENSG00000175643.10	ENST00000312499.6	1427	2	0	0	0	0	multi-exon	FALSE	canonical	3	1703	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTTTTTTTTTA	8	True	NA	13	True	AATAAA	-13	NA	11345458	11351760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11345767_11350641
transcript_65048.known	chr16	+	934	2	FSM	ENSG00000175643.10	ENST00000572992.1	934	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCAAATGCCTGCAGAA	10	True	NA	NA	False	NA	NA	NA	11312899	11317036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11312938_11316140
transcript_65053.known	chr16	+	818	2	FSM	ENSG00000175643.10	ENST00000576027.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACTCAAACATTTAGAC	-1	True	NA	NA	False	NA	NA	NA	11345449	11351365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11345544_11350641
transcript_65055.known	chr16	-	1238	2	FSM	ENSG00000185338.7	ENST00000332029.4	1238	2	0	0	0	0	multi-exon	TRUE	canonical	3	608	junction_1	0	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGTTTTCTA	-3	True	NA	6	True	AATAAA	-25	NA	11256204	11254416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11255529_11256078
transcript_65056.known	chr16	-	1784	1	FSM	ENSG00000185338.7	ENST00000644787.1	1784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGTTTTCTA	1	True	NA	6	True	AATAAA	-25	NA	11256200	11254416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11254400_11256200
transcript_65057.known	chr16	-	399	2	FSM	ENSG00000175646.4	ENST00000312511.4	399	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACTCTTCTCTCCTTGT	1	True	NA	-4	True	AATAAA	-14	NA	11281330	11280840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11281036_11281126
transcript_6506.known	chr1	+	1834	10	FSM	ENSG00000121775.18	ENST00000468135.5	1834	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.8333003822212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	3	True	NA	83	True	AAAAAG	-24	NA	32072968	32102866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076563_32076647_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_65062.known	chr16	-	10590	66	FSM	ENSG00000188897.9	ENST00000598234.6	10590	66	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_26	4.08083991818716	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGTCTCTAGATTGCT	NA	False	NA	-4	True	AATAAA	-16	NA	11527245	11372014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11372739_11383641_11383784_11383885_11384009_11384215_11384326_11384887_11385066_11385210_11385417_11387110_11387296_11390104_11390203_11390278_11390464_11391665_11391862_11392009_11392103_11392316_11392502_11393390_11393560_11396510_11396676_11398347_11398510_11399471_11399601_11399701_11399816_11401265_11401407_11402036_11402159_11404703_11404867_11407199_11407338_11411245_11411328_11412840_11412954_11414341_11414509_11417631_11417840_11423178_11423257_11424108_11424345_11425124_11425434_11431035_11431230_11435661_11435880_11439488_11439582_11440723_11440844_11440938_11441077_11446549_11446637_11446747_11446911_11447933_11448074_11448918_11449108_11450608_11450821_11456858_11457040_11459895_11460055_11460476_11460611_11460963_11461120_11462116_11462304_11469174_11469255_11469507_11469668_11471653_11471818_11475623_11475716_11476763_11476947_11477820_11478006_11478529_11478686_11484878_11485074_11487261_11487387_11488708_11488868_11491700_11491846_11493643_11493797_11494574_11494761_11500803_11500970_11502076_11502181_11508715_11508856_11514358_11514540_11515928_11516064_11516141_11516308_11518899_11518971_11521951_11522113_11523419_11523474_11527108
transcript_65066.known	chr16	-	717	5	FSM	ENSG00000189067.14	ENST00000574763.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	591.49529795257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGGAGGGAGCCGGGTGC	2	True	NA	NA	False	NA	NA	NA	11586919	11549625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11575405_11575587_11586885
transcript_65070.known	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_3	242.910591690761	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	2	True	NA	-12	True	AATAAA	-16	NA	11586919	11547721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
transcript_65071.known	chr16	-	1118	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	417.923703829087	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGACTTCATTAGCACA	220	False	NA	NA	False	NA	NA	NA	11587247	11549106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
transcript_65072.known	chr16	-	2632	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	536.755893203688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	11587563	11547721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
transcript_65082.known	chr16	-	3116	12	FSM	ENSG00000153066.13	ENST00000283033.10	3116	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	22.3828446703539	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	-53	True	NA	-5	True	AATAAA	-24	NA	11742857	11679082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11700451_11700565_11721576_11721671_11730644_11730775_11733981_11734080_11736016_11736234_11742476
transcript_65085.nic	chr16	-	3057	11	NIC	ENSG00000153066.13	novel	3116	12	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	30.1071420098288	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	798	False	NA	-5	True	AATAAA	-24	NA	11742911	11679082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11721576_11721671_11730644_11730775_11733981_11734080_11736016_11736234_11742476
transcript_65088.nic	chr16	-	2927	10	NIC	ENSG00000153066.13	novel	3116	12	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	33.2279816635332	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	798	False	NA	-5	True	AATAAA	-24	NA	11742911	11679082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11721576_11721671_11733981_11734080_11736016_11736234_11742476
transcript_65097.known	chr16	+	3264	2	FSM	ENSG00000184602.6	ENST00000329565.6	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	3	True	NA	21	True	AATAAA	-33	NA	11668454	11679152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11668541_11675974
transcript_6510.known	chr1	+	2713	9	FSM	ENSG00000121774.18	ENST00000327300.12	2713	9	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	246.658544348255	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	4	True	NA	NA	False	AATAAA	-23	NA	32013867	32043877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_65101.nnic	chr16	+	3409	2	NNC	ENSG00000184602.6	novel	3264	2	NA	NA	278	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	281	False	NA	21	True	AATAAA	-33	NA	11668732	11679152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_11668964_11675974
transcript_65102.known	chr16	-	3805	23	FSM	ENSG00000122299.12	ENST00000355758.9	3805	23	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_12	34.3533233682897	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTTCATTTTTTCCT	-25	True	NA	-11	True	AATAAA	-14	NA	11797258	11750596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430_11758540_11761405_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488_11765686_11767416_11767579_11768314_11768502_11769030_11769096_11770782_11770988_11774235_11774520_11774979_11775014_11776319_11776359_11776451_11776533_11776750_11776910_11779165_11779364_11781424_11781465_11782286_11782389_11797123
transcript_65106.known	chr16	+	808	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGAGGTCTCATTTATA	-40	True	NA	NA	False	NA	NA	NA	11797467	11798275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11797500_11798300
transcript_65111.known	chr16	-	1323	9	FSM	ENSG00000171490.13	ENST00000355674.9	1323	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	746.968529708582	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAATCAAAGAAGAGGCA	-7	True	NA	-11	True	NA	NA	NA	11851544	11837965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841818_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_65113.known	chr16	-	1470	8	FSM	ENSG00000171490.13	ENST00000396503.7	1470	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	792.658610922374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTTTGTAACCTTCTC	-4	True	NA	NA	False	NA	NA	NA	11851580	11837717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11851407
transcript_65115.nic	chr16	-	985	8	ISM	ENSG00000171490.13	ENST00000571133.6	5440	9	-56	6092	-18	-93	5prime_fragment	FALSE	canonical	3	1873	junction_1	231.025928397305	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGGAAGAAGAAGAGGC	NA	False	NA	NA	False	AAGAAA	-16	NA	11851598	11839941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_65118.known	chr16	-	894	7	FSM	ENSG00000171490.13	ENST00000573251.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	877.780423695028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCTGAATCAAAGAAGG	21	True	NA	NA	False	AGTAAA	-39	NA	11851516	11839848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11839986_11841694_11841821_11841906_11842001_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_65119.known	chr16	-	871	7	FSM	ENSG00000171490.13	ENST00000570767.5	871	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	877.622055455663	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAGAAAAAAGTTAGTA	-5	True	NA	13	True	NA	NA	NA	11851542	11841707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850414_11851403
transcript_65129.known	chr16	-	2509	15	FSM	ENSG00000103342.13	ENST00000439887.6	2509	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_12	416.930896491229	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCGGTATTTGAATT	804	False	NA	-18	True	AATAAA	-16	NA	11915878	11872678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896783_11897839_11897882_11897993_11898036_11915368
transcript_6513.known	chr1	+	2738	9	FSM	ENSG00000121774.18	ENST00000307714.12	2738	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	680.61057147241	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	62	False	NA	NA	False	AATAAA	-23	NA	32013925	32043877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038120_32038551_32038620_32039514_32039574_32042526
transcript_65130.known	chr16	-	1603	15	FSM	ENSG00000103342.13	ENST00000420576.6	1603	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	500.510091847124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTCTTGATGACCCTG	600	False	NA	NA	False	NA	NA	NA	11916082	11873118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11916041
transcript_65150.nic	chr16	-	1026	6	ISM	ENSG00000103342.13	ENST00000434724.7	7141	15	-53	22973	-53	-308	5prime_fragment	FALSE	canonical	3	1482	junction_3	83.3138643924287	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATGAAAGAGAAGCTAAAG	673	False	NA	-11	True	NA	NA	NA	11916009	11891100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11915368
transcript_65163.nic	chr16	+	867	7	ISM	ENSG00000048471.14	ENST00000564111.5	2248	8	-57	4664	-46	-3248	5prime_fragment	FALSE	canonical	3	8	junction_6	3.19722101554181	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGAACGGGTGCTC	NA	False	NA	NA	False	NA	NA	NA	11976687	12048620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371
transcript_65166.known	chr16	-	6143	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	18.6607133363712	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-48	True	NA	1	True	ATTAAA	-21	NA	12803887	12659798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
transcript_65168.known	chr16	-	1993	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTCTTCTTTTAGTGT	-12	True	NA	-1	True	ATTAAA	-16	NA	12803851	12663486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_12665116_12781184_12781404_12803706
transcript_65172.known	chr16	+	4043	2	FSM	ENSG00000237515.9	ENST00000423335.2	4043	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGAGCATTTTCATTA	131	False	NA	20	True	AATAAA	-23	NA	12901756	12911650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_12902628_12908478
transcript_65173.nic	chr16	+	2810	2	ISM	ENSG00000237515.9	ENST00000566106.1	555	3	121012	-2388	121012	2388	3prime_fragment	FALSE	canonical	3	45	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCTTTCAAAGAACGCA	NA	False	NA	NA	False	AAAAAG	-10	NA	13203391	13237681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_13203550_13235029
transcript_65175.known	chr16	+	2803	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	6.20730313782869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTTCTCTGTTTA	-12	True	NA	NA	False	NA	NA	NA	13920157	13936727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
transcript_6518.known	chr1	+	1778	9	FSM	ENSG00000121775.18	ENST00000336294.10	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	35.0962961008708	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	-27	True	NA	80	True	AAAAAG	-21	NA	32072938	32102863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_65181.known	chr16	+	2073	6	FSM	ENSG00000175595.16	ENST00000575156.5	2073	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	5.57135531087365	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAATATCCTTTTTAA	-13	True	NA	NA	False	AATAAA	-17	NA	13920156	13933247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156
transcript_65184.known	chr16	+	8804	17	FSM	ENSG00000186260.17	ENST00000571589.6	8804	17	0	0	0	0	multi-exon	TRUE	canonical	2	37	junction_15	14.7266764750231	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTGCTGTGCAG	-5	True	NA	15	True	AATAAA	-16	NA	14071318	14266773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14071366_14079289_14079355_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247508_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
transcript_65186.known	chr16	+	3219	2	FSM	ENSG00000262454.4	ENST00000570945.2	3219	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGGAGGCCGAGGCAGG	1	True	NA	NA	False	AATACA	-45	NA	14302244	14328939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14302537_14326012
transcript_65188.known	chr16	-	3071	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	77.9885358256381	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	3810	False	14630279	-1	True	ATTAAA	-16	NA	14630260	14435700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_65189.known	chr16	-	2100	24	FSM	ENSG00000140694.17	ENST00000341484.11	2100	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	104.369110148162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACCAAGTTGTCTCCTG	3	True	NA	NA	False	NA	NA	NA	14630276	14436604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630189
transcript_65194.nic	chr16	-	1924	23	ISM	ENSG00000140694.17	ENST00000437198.7	3071	24	6	11256	-3	0	5prime_fragment	FALSE	canonical	0	0	junction_20	79.5348694255888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTCTCAGAGGGAAGG	-18	True	NA	NA	False	NA	NA	NA	14630254	14446956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_65203.known	chr16	+	2903	8	FSM	ENSG00000103429.11	ENST00000261658.7	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	56.9346205784158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAGAGAAAAAGCAATT	16	True	NA	NA	False	AATAAA	-30	NA	14632950	14669236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803_14649974_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_65209.known	chr16	+	1414	4	FSM	ENSG00000103429.11	ENST00000562442.5	1414	4	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_3	13.0213499897497	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTATTTTGTGTCTG	-3	True	NA	15	True	TATAAA	-14	NA	14632931	14650589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803
transcript_65212.known	chr16	-	636	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694308	14672547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
transcript_65214.known	chr16	-	706	2	FSM	ENSG00000255277.3	ENST00000542005.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGAGCCTTTCTGCTC	NA	False	NA	-24	True	AATAAA	-13	NA	14824702	14822431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14823069_14824633
transcript_65218.known	chr16	+	4312	31	FSM	ENSG00000103512.16	ENST00000287667.12	4312	31	0	0	0	0	multi-exon	TRUE	canonical	3	934	junction_11	364.893836920031	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	3	True	NA	24	True	AATAAA	-29	NA	14833720	14896157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14834017_14838406_14838497_14841361_14841408_14844673_14844775_14846576_14846684_14848898_14848972_14852429_14852583_14853466_14853605_14853936_14854027_14857216_14857323_14857504_14857656_14863012_14863188_14864584_14864727_14865023_14865156_14866554_14866692_14868547_14868636_14871620_14871685_14872233_14872330_14875035_14875255_14875339_14875423_14876358_14876519_14876663_14876791_14878720_14878835_14880014_14880143_14881543_14881686_14882593_14882678_14884371_14884483_14886760_14886863_14889095_14889216_14894997_14895091_14895513
transcript_65247.known	chr16	+	4598	23	FSM	ENSG00000179889.20	ENST00000396410.9	4598	23	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_18	97.9217620736234	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCCTGAATTAGTAAGA	17	True	NA	NA	False	AATAAA	-17	NA	14975025	15038332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_65250.known	chr16	+	2683	22	FSM	ENSG00000179889.20	ENST00000627450.2	2683	22	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	176.994612829096	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCCCGTGGCAACTTTT	12	True	NA	NA	False	NA	NA	NA	14975128	15036604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998342_14998406_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_65257.nic	chr16	+	2517	17	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-104	5034	-11	0	5prime_fragment	FALSE	canonical	3	502	junction_16	78.7747728892315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	-8	True	NA	NA	False	NA	NA	NA	14975000	15032653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734
transcript_65258.known	chr16	+	2048	17	FSM	ENSG00000179889.20	ENST00000535621.6	2048	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_16	157.912740441517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGACCTAACTCCATCTAA	3	True	NA	NA	False	AATAAA	-41	NA	14975011	15139339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15138878
transcript_65262.nnic	chr16	+	2198	17	NNC	ENSG00000179889.20	novel	2048	17	NA	NA	7	22219	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	171.049232222042	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGAATTCTTCTGCC	22	False	NA	NA	False	AATAAA	-15	NA	14975095	15161558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15160863
transcript_65264.nnic	chr16	+	2431	17	NNC	ENSG00000179889.20	novel	2048	17	NA	NA	7	53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	172.375124637373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAAACAAACTACAATC	22	False	NA	NA	False	AATAAA	-2	NA	14975095	15139392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030410_15138817
transcript_65275.nic	chr16	+	2258	15	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-31	7882	-6	0	5prime_fragment	FALSE	canonical	3	555	junction_4	72.4053217121842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTCTAAGTAATCAGAC	0	True	NA	NA	False	CATAAA	-19	NA	14975073	15029805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877
transcript_65279.nic	chr16	+	1391	13	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-104	14881	-11	5419	5prime_fragment	FALSE	canonical	3	555	junction_4	73.8682667546311	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTTGAATGATTTTAG	-8	True	NA	8	True	AATATA	-18	NA	14975000	15022806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703
transcript_6528.known	chr1	+	1215	8	FSM	ENSG00000121774.18	ENST00000492989.1	1215	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	727.031425646479	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACATGAGGGGAAAA	132	False	NA	NA	False	NA	NA	NA	32013995	32042624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32014378_32030297_32030423_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_65284.known	chr16	+	884	9	FSM	ENSG00000179889.20	ENST00000562119.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	231.022590886692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGGCCTTCCAGAAAGG	15	False	NA	NA	False	GGGGCT	-25	NA	14975088	15036197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001789_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_65285.known	chr16	+	283	3	FSM	ENSG00000179889.20	ENST00000566426.1	283	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	388.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTCATATCCGGAGAT	22	True	NA	NA	False	TTTAAA	-28	NA	14975030	14998362	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997756_14997827_14998339
transcript_65290.known	chr16	-	1210	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_9	106.15397621694	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	0	True	NA	-4	True	AATAAA	-17	NA	15056074	15037856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
transcript_65292.known	chr16	-	1043	9	FSM	ENSG00000157045.9	ENST00000565187.5	1043	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	231.834497810399	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTATTTTGGCAAAGGC	-14	True	NA	-21	True	NA	NA	NA	15056027	15037873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
transcript_65296.known	chr16	-	1049	8	FSM	ENSG00000157045.9	ENST00000622833.4	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	252.971967471755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	-5	True	NA	-1	True	AATAAA	-20	NA	15056079	15037853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15055890
transcript_65298.known	chr16	-	3706	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_6	20.9454721304669	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTCAATTTCTGTTT	NA	False	NA	-24	True	AATAAA	-16	NA	15094272	15060032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_65299.known	chr16	-	2198	17	FSM	ENSG00000085721.13	ENST00000429751.6	2198	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	44.2236856786044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAATATAGGCAGCA	7	False	NA	NA	False	NA	NA	NA	15094249	15061427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15091314_15091372_15092508_15092615_15094144
transcript_65303.nic	chr16	-	777	3	ISM	ENSG00000085721.13	ENST00000564131.1	1001	10	-60	14435	-2	-14435	5prime_fragment	FALSE	canonical	3	226	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGATTCAGCATTTCCA	NA	False	NA	NA	False	TTTAAA	-34	NA	15094313	15090869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_15091372_15092508_15092615_15094144
transcript_65304.known	chr16	-	2493	8	FSM	ENSG00000250251.6	ENST00000424133.2	2493	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	52.2122825490286	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCCCACAAAGAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	15131499	15126658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
transcript_65306.known	chr16	+	5894	4	FSM	ENSG00000156968.9	ENST00000396385.4	5894	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	3.77123616632825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAAAGTTTCTTTTAAT	-5	True	NA	NA	False	ATTAAA	-25	NA	15395753	15413271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15396208_15400786_15400858_15407823_15407854_15407932
transcript_65308.known	chr16	+	5820	3	FSM	ENSG00000156968.9	ENST00000287594.7	5820	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAAAAAGTTTCTTTT	-5	True	NA	NA	False	ATTAAA	-22	NA	15395753	15413268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15396208_15407823_15407854_15407932
transcript_65311.known	chr16	+	2111	6	FSM	ENSG00000166780.11	ENST00000300006.9	2111	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	27.1366910289372	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	-2	True	NA	11	True	ATTAAA	-37	NA	15434587	15588259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15586716
transcript_65321.known	chr16	+	546	4	FSM	ENSG00000166780.11	ENST00000567550.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	16.5730705262081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCATCTTCTGCTCCT	-2	True	NA	NA	False	NA	NA	NA	15434587	15581392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216
transcript_65322.known	chr16	+	1854	5	FSM	ENSG00000166780.11	ENST00000566490.5	1854	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	80.5306618624236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTACTTTTTTTCTTGA	NA	False	NA	19	True	AATAAA	-31	NA	15434474	15587972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15586716
transcript_65323.known	chr16	-	5900	27	FSM	ENSG00000166783.22	ENST00000551742.5	5900	27	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	12.0015408280987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTGTATTTTCAGGTT	24	True	NA	NA	False	NA	NA	NA	15643108	15596170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623127_15624768_15624928_15625015_15625174_15625371_15625798_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_65324.known	chr16	-	5891	27	FSM	ENSG00000166783.22	ENST00000548025.5	5891	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	12.4375957074608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTGTATTTTCAGGTT	24	True	NA	NA	False	NA	NA	NA	15643108	15596170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633835_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_65331.known	chr16	-	7730	27	FSM	ENSG00000166783.22	ENST00000396368.8	7730	27	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	10.5867087598962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTTCCCAAGTGAG	-22	True	NA	-18	True	AATAAA	-20	NA	15643154	15594386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_65339.nnic	chr16	+	2852	10	NNC	ENSG00000072864.16	novel	5861	10	NA	NA	-16	1420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.0146142626022	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGAACTTGTTGGGC	6608	False	NA	23	True	AATAAA	-13	NA	15650191	15701911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699728_15700631_15701054
transcript_65340.known	chr16	+	3203	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	7.07106781186548	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	-4	True	NA	18	True	AATAAA	-20	NA	15650244	15726353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
transcript_65344.known	chr16	+	3093	8	FSM	ENSG00000072864.16	ENST00000674581.1	3093	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.8830990192666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	14	True	NA	18	True	AATAAA	-20	NA	15650262	15726353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15696708_15696861_15724190
transcript_65346.known	chr16	-	646	6	FSM	ENSG00000133393.13	ENST00000573429.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	281.536924754108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTAAAATTGTATTAT	-14	True	NA	NA	False	NA	NA	NA	15888614	15867419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883021_15884007_15884206_15888557
transcript_65348.known	chr16	-	2264	5	FSM	ENSG00000133393.13	ENST00000255759.11	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_3	34.2928563989645	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCAAAGGGTGTTC	-3	True	NA	-11	True	AATAAA	-17	NA	15888603	15865718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15884007_15884206_15888557
transcript_65349.known	chr16	-	565	4	FSM	ENSG00000133393.13	ENST00000575744.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	275.778091144956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTGAGATGGA	-3	True	NA	48	True	AAAAAG	-21	NA	15888603	15867219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15888557
transcript_65350.known	chr16	-	851	4	FSM	ENSG00000133393.13	ENST00000573087.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	274.153647107279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGAGTAGTTTTTGTATT	9277	False	NA	NA	False	AAAACA	-16	NA	15888625	15867068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15884007_15884206_15888557
transcript_65351.known	chr16	-	530	4	FSM	ENSG00000133393.13	ENST00000575073.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	247.958777936083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTTTCTACAAAACAC	9277	False	NA	-70	True	NA	NA	NA	15888625	15867337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15879803_15879889_15884007_15884206_15888557
transcript_65353.known	chr16	-	2039	3	FSM	ENSG00000133393.13	ENST00000573968.5	2039	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGCAAAGGGTGT	-2	True	NA	-13	True	AATAAA	-15	NA	15888602	15865720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15884007_15884206_15888557
transcript_65354.known	chr16	+	6504	31	FSM	ENSG00000103222.20	ENST00000399410.8	6504	31	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	34.0996089909156	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	-6	True	NA	16	True	AGTAAA	-19	NA	15949615	16143053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
transcript_65356.known	chr16	+	6387	30	FSM	ENSG00000103222.20	ENST00000572882.3	6387	30	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_16	47.772175345253	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTCCCTTTCCTTTG	19	False	NA	37	True	AGTAAA	-40	NA	15949576	16143074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
transcript_65363.known	chr16	-	714	2	FSM	ENSG00000091262.17	ENST00000575728.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	26	False	NA	NA	False	AATAAA	-21	NA	16223467	16221186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_16221832_16223398
transcript_65367.known	chr16	+	3911	32	FSM	ENSG00000103226.19	ENST00000263012.10	3911	32	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_31	481.963772542817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCATAGATGTATTTC	77	False	NA	NA	False	AATAAA	-24	NA	16232600	16294806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167_16294296_16294626
transcript_65368.known	chr16	+	5231	32	FSM	ENSG00000103226.19	ENST00000676846.1	5231	32	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_31	483.112806030513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTGTTATGAGCACA	NA	False	NA	NA	False	NA	NA	NA	16232505	16300806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167_16294769_16299874
transcript_65377.known	chr16	+	4320	31	FSM	ENSG00000103226.19	ENST00000399336.9	4320	31	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_12	395.608285499123	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	4	True	NA	NA	False	AATAAA	-29	NA	16232527	16294811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167
transcript_65381.known	chr16	+	3801	30	FSM	ENSG00000103226.19	ENST00000678538.1	3801	30	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_28	497.191680523645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGGCATCCTGCAC	31	False	NA	NA	False	NA	NA	NA	16232554	16294439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16293651_16293745_16294167
transcript_65382.known	chr16	+	4129	30	FSM	ENSG00000103226.19	ENST00000677260.1	4129	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	496.00014383796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAGCTCATCATAGATG	46	False	NA	NA	False	AATAAA	-18	NA	16232569	16294800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167
transcript_65383.known	chr16	+	4063	30	FSM	ENSG00000103226.19	ENST00000677781.1	4063	30	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	480.001032995321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAGCTCATCATAGATG	30	False	NA	NA	False	AATAAA	-18	NA	16232666	16294800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167
transcript_65387.known	chr16	+	3757	23	FSM	ENSG00000103226.19	ENST00000574894.2	3757	23	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_12	438.228826222365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGGCCCTGTCTCAGAA	31	False	NA	NA	False	NA	NA	NA	16232554	16278371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369
transcript_65388.known	chr16	+	3883	22	FSM	ENSG00000103226.19	ENST00000678080.1	3883	22	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_12	448.458483404951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCATCCTGGGGGACAGA	31	False	NA	NA	False	NA	NA	NA	16232554	16278352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275444_16277369
transcript_65391.known	chr16	-	4082	22	FSM	ENSG00000285628.1	ENST00000648391.1	4082	22	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_13	86.6890865820278	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCACCCTCAGCGGA	NA	False	NA	NA	False	NA	NA	NA	18344283	18318007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18318436_18319794_18319831_18319939_18320001_18321016_18321125_18324090_18324236_18324398_18324499_18328113_18328243_18334850_18334968_18336633_18336761_18336850_18337062_18337155_18337300_18337385_18337557_18339047_18339244_18339385_18339621_18339800_18339958_18340248_18340870_18341621_18341767_18342656_18342810_18343199_18343360_18343425_18343640_18343732_18344013_18344139
transcript_65402.known	chr16	-	4235	31	FSM	ENSG00000185164.15	ENST00000622306.5	4235	31	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_20	416.278967627346	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATAGATGTATTTCTT	-1	True	NA	NA	False	AATAAA	-26	NA	18562097	18499926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
transcript_65425.known	chr16	-	3921	32	FSM	ENSG00000185164.15	ENST00000621364.4	3921	32	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	494.891547837208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	NA	False	NA	NA	False	AATAAA	-28	NA	18562112	18499924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18500109_18500439_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
transcript_65429.known	chr16	+	796	2	FSM	ENSG00000256340.9	ENST00000565118.2	813	2	0	17	0	-17	multi-exon	FALSE	canonical	3	47	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	18571161	18573522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_18571312_18572876
transcript_65436.known	chr16	-	589	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	5772.98106700516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	8415	False	NA	-35	True	AATAAA	-14	NA	18790362	18782967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
transcript_65439.known	chr16	-	2278	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	3644	junction_2	115.149641771045	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTCACTTTCTTTATA	-2	True	NA	-19	True	AATAAA	-16	NA	18801549	18791668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
transcript_65444.known	chr16	-	802	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	5826.7977644243	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	8517	False	NA	-36	True	AATAAA	-13	NA	18790260	18782968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
transcript_65446.known	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_4	5357.45718601652	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-4	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
transcript_65447.known	chr16	-	481	5	FSM	ENSG00000134419.15	ENST00000569365.6	481	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	5447.53280738171	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-4	True	NA	-35	True	AATAAA	-14	NA	18790334	18782967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788160_18788980_18789119_18790309
transcript_6545.known	chr1	+	1538	7	FSM	ENSG00000121775.18	ENST00000441402.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	24.1413660664751	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	-23	True	NA	83	True	AAAAAG	-24	NA	32072942	32102866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_65451.known	chr16	-	948	5	FSM	ENSG00000170540.15	ENST00000563861.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1670.04655623728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTGGCTACAGGAAGC	0	True	NA	NA	False	NA	NA	NA	18801547	18792878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18793371_18794598_18794684_18797924_18798045_18798700_18798835_18801430
transcript_65453.known	chr16	-	778	4	FSM	ENSG00000170540.15	ENST00000569976.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	3713	junction_1	117.218693996402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGCCTATAATCCCAGC	-1	True	NA	NA	False	AGTAAA	-44	NA	18801548	18795175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18795582_18797924_18798045_18798700_18798835_18801430
transcript_65462.known	chr16	+	4401	16	FSM	ENSG00000170537.13	ENST00000304381.10	4401	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	9.67379047851576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATCGTGTATACTGGAA	0	True	NA	16	True	ATTAAA	-23	NA	18983933	19063942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_18984131_19009171_19009416_19016449_19016599_19021628_19021797_19023112_19023196_19030223_19030370_19035675_19035824_19037873_19038048_19040288_19040447_19044883_19045002_19045340_19045439_19047062_19047250_19051685_19051817_19056541_19056698_19059415_19059495_19061777
transcript_65466.known	chr16	+	2738	15	FSM	ENSG00000170537.13	ENST00000569532.5	2738	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	9.89562880203957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTATTAAGTACCTACT	0	True	NA	NA	False	AATAAA	-12	NA	18983933	19059996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_18984131_19009171_19009416_19016449_19016599_19021628_19021797_19023112_19023196_19030223_19030370_19035675_19035824_19037873_19038048_19040288_19040447_19044883_19045002_19045340_19045439_19047062_19047250_19051685_19051817_19056541_19056698_19059415
transcript_65471.known	chr16	+	2642	6	FSM	ENSG00000167186.11	ENST00000321998.10	2642	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	5.38144961882948	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGATCTGCTCTTTAA	-1	True	NA	80	True	AATAAA	-22	NA	19067613	19080095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19067738_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_65475.known	chr16	+	840	6	FSM	ENSG00000167186.11	ENST00000569312.5	840	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.2547432051625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGTTTGTTTTTTTTTT	6	True	NA	-5	True	AATAAA	-3	NA	19067660	19078278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19067738_19071927_19072107_19073920_19074098_19075720_19075861_19077305_19077375_19078080
transcript_65477.known	chr16	+	703	5	FSM	ENSG00000167186.11	ENST00000566049.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.4451460160068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTTTTTTTTTAA	11	False	NA	0	True	AATAAA	-8	NA	19067625	19078283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19067738_19071927_19072107_19075720_19075861_19077305_19077375_19078080
transcript_65479.nic	chr16	+	1786	8	NIC	ENSG00000103528.17	novel	3088	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	10.5133539959852	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGTGTGTCTGGTTG	NA	False	NA	14	True	AATAAA	-15	NA	19168226	19250078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_19168662_19172759_19172778_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19249940
transcript_65480.known	chr16	+	3088	8	FSM	ENSG00000103528.17	ENST00000355377.7	3088	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	12.5454276572001	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGAGTTATCTTTTTCT	-24	True	NA	13	True	ATTAAA	-21	NA	19168239	19268332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19168662_19172759_19172778_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19266879
transcript_65482.known	chr16	+	1721	7	FSM	ENSG00000103528.17	ENST00000568115.5	1721	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.0158670215308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGTGTGTCTGGTTG	-4	True	NA	14	True	AATAAA	-15	NA	19168259	19250078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19168662_19173443_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19249940
transcript_65483.nic	chr16	+	1852	7	NIC	ENSG00000103528.17	novel	3088	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	21.9348783650352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTGTCACATACT	-24	True	NA	NA	False	AAAAAG	-5	NA	19168239	19267128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_19168662_19173443_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19266879
transcript_65489.nic	chr16	+	499	2	ISM	ENSG00000103534.17	ENST00000541464.5	3581	21	-36	67500	7	0	5prime_fragment	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTCATACAGCTGA	-1	True	NA	NA	False	NA	NA	NA	19410502	19430640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_19410774_19430412
transcript_65491.known	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	88.843682949324	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-18	True	NA	NA	False	NA	NA	NA	19522123	19502382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
transcript_65497.known	chr16	+	5446	15	FSM	ENSG00000103540.16	ENST00000381396.9	5446	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	22.9241206183018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	-21	True	NA	NA	False	AATAAA	-20	NA	19523856	19553408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19548514_19548601_19551195
transcript_65499.known	chr16	+	5549	15	FSM	ENSG00000103540.16	ENST00000396212.6	5549	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	24.8953933940578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	1739	False	NA	NA	False	AATAAA	-20	NA	19523810	19553408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19524089_19525718_19525862_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19551195
transcript_65515.known	chr16	+	3606	31	FSM	ENSG00000103544.16	ENST00000417362.7	3606	31	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	35.2954041704519	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCTCCAGAAGAGAAAGA	-10	True	NA	55	True	NA	NA	NA	19555702	19701163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685_19616809_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
transcript_65518.nnic	chr16	+	2982	30	NIC	ENSG00000103544.16	novel	3606	31	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_29	69.7253998998998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTCTCTGTGTTGTC	-10	True	NA	16	True	ATTAAA	-17	NA	19555702	19700686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685_19616809_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19700377
transcript_65526.nic	chr16	+	2939	29	NIC	ENSG00000103544.16	novel	3855	31	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	68.9463337587686	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTCTCTGTGTTGTCT	63	False	NA	17	True	ATTAAA	-18	NA	19555692	19700687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
transcript_65532.nic	chr16	+	1719	9	ISM	ENSG00000174628.16	ENST00000320394.10	3482	10	1812	1103	-11	-175	3prime_fragment	FALSE	canonical	3	37	junction_5	17.8075651058756	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACAGCCTTTTAAATTT	-25	True	NA	5	True	AATAAA	-16	NA	19718267	19857364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_65538.known	chr16	+	920	8	FSM	ENSG00000174628.16	ENST00000564955.5	920	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	21.1775776688073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTTGGAACATGTGC	-14	True	NA	NA	False	NA	NA	NA	19718278	19856641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19718488_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_65542.known	chr16	+	1915	7	FSM	ENSG00000174628.16	ENST00000568300.6	1915	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	26.9814751264641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTTAGCTCTTCATC	-10	True	NA	6	True	AATAAA	-20	NA	19718282	19857539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19764113_19788837_19788923_19827025_19827138_19856486
transcript_65543.nnic	chr16	+	1460	6	NIC	ENSG00000174628.16	novel	1915	7	NA	NA	0	-175	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	27.2426136778394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACAGCCTTTTAAATTT	5	True	NA	5	True	AATAAA	-16	NA	19718297	19857364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_19718488_19730429_19730495_19733697_19733828_19788837_19788923_19827025_19827138_19856486
transcript_65545.known	chr16	+	691	4	FSM	ENSG00000174628.16	ENST00000564515.5	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	13.1402688962847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGAGCTTTTCCGCCTT	5	True	NA	NA	False	NA	NA	NA	19718297	19735658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352
transcript_65546.known	chr16	+	473	3	FSM	ENSG00000174628.16	ENST00000566312.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATACTTTGATTTTACA	62	False	NA	NA	False	AATAAA	-17	NA	19718415	19734033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19718488_19730429_19730495_19733697
transcript_65548.known	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_3	34.928498393146	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-20	True	NA	-8	True	AATAAA	-30	NA	19718227	19701936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
transcript_6555.nnic	chr1	+	4084	15	NNC	ENSG00000025800.14	novel	7355	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	89.8593004510441	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	57	True	ATTAAA	-21	NA	32108046	32173173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_32108135_32139754_32139865_32154587_32154722_32156852_32156946_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_65562.nic	chr16	-	1192	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-240	3904	-240	635	5prime_fragment	FALSE	canonical	3	752	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAGGAAAGAGAGTG	332	False	NA	15	True	AAGAAA	-3	NA	19718475	19714163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_65563.nic	chr16	-	1141	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-240	3955	-240	584	5prime_fragment	FALSE	canonical	3	752	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAGAGCAGCCAGTCA	332	False	NA	-36	True	AAAAAG	-15	NA	19718475	19714214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_65564.known	chr16	-	1020	2	FSM	ENSG00000103550.14	ENST00000564480.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGTAGAACCTGAGAC	676	False	NA	NA	False	AAAAAG	-37	NA	19718131	19714798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19715038_19717350
transcript_65567.nic	chr16	-	795	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	8	4053	0	486	5prime_fragment	FALSE	canonical	3	752	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGTAAAAAGAAGCCAGT	-20	True	NA	89	True	NA	NA	NA	19718227	19714312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_65570.nic	chr16	-	736	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-4	4124	-4	415	5prime_fragment	FALSE	canonical	3	752	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGGAGGGAGATGCC	568	False	NA	18	True	AAGAAA	-8	NA	19718239	19714383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_65573.nic	chr16	-	550	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-3	4309	-3	230	5prime_fragment	FALSE	canonical	3	752	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCCCAGGACCCCACAG	569	False	NA	NA	False	AAAACA	-16	NA	19718238	19714568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_65574.nic	chr16	-	430	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-3	4429	-3	110	5prime_fragment	FALSE	canonical	3	752	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGTCACCTCTAGCCA	569	False	NA	NA	False	AAGAAA	-3	NA	19718238	19714688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_65575.nic	chr16	-	296	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-4	4564	-4	-25	5prime_fragment	FALSE	canonical	3	752	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTGTCAGCACCCTTT	568	False	NA	NA	False	AAAAAG	-12	NA	19718239	19714823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_6558.known	chr1	+	3941	14	FSM	ENSG00000025800.14	ENST00000471599.5	3941	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	93.6083367551158	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4	True	NA	57	True	ATTAAA	-21	NA	32108057	32173173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32108135_32154587_32154722_32156852_32156928_32157345_32157446_32158266_32158362_32159399_32159532_32160618_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_65586.known	chr16	-	5144	4	FSM	ENSG00000167191.12	ENST00000300571.7	5144	4	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_2	61.5196445590079	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCTTGTACAGAAAAG	7	True	NA	54	True	ATTAAA	-17	NA	19884848	19856690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19860545_19861836_19861974_19871815_19872847_19884726
transcript_65588.known	chr16	-	1830	4	FSM	ENSG00000167191.12	ENST00000569847.1	1830	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	403.078983161696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGCCGCCTCACAGCC	1770	False	NA	51	True	NA	NA	NA	19885727	19860407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19860545_19861836_19861974_19871815_19872847_19885202
transcript_65590.known	chr16	-	2078	2	FSM	ENSG00000167191.12	ENST00000562348.1	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGTCTCTGCTGTCT	9947	False	NA	-6	True	AATAAA	-19	NA	19862340	19858970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19860545_19861836
transcript_65591.known	chr16	+	2533	14	FSM	ENSG00000005187.12	ENST00000289416.10	2533	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	7.17325737038447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTGTGGTTCCTGAA	3	True	NA	NA	False	AATAAA	-17	NA	20764013	20797581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
transcript_65593.known	chr16	+	1517	9	FSM	ENSG00000005187.12	ENST00000440284.6	1517	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	4.18143217091943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCTTCTTGGTCTCCA	-11	True	NA	16	True	TATAAA	-21	NA	20764039	20786314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077
transcript_65594.known	chr16	-	4122	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	118.904110526087	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	NA	False	NA	-16	True	AATAAA	-16	NA	20742084	20733663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
transcript_65597.known	chr16	-	4357	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_2	17.5941909605289	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	-5	True	NA	-16	True	AATAAA	-16	NA	20741818	20733663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
transcript_65605.known	chr16	-	2903	10	FSM	ENSG00000196678.14	ENST00000563117.5	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	26.8718954566309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTTATAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	20806676	20797373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
transcript_65614.known	chr16	-	563	4	FSM	ENSG00000196678.14	ENST00000565884.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	19.6185852927496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCAGTGTTGCTGAAC	421	False	NA	NA	False	NA	NA	NA	20806119	20802917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20802924_20803432_20803517_20803602_20803671_20805714
transcript_65615.known	chr16	+	2691	20	FSM	ENSG00000005189.20	ENST00000261377.11	2691	20	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	8.8452375404403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	0	True	NA	11	True	AATAAA	-20	NA	20806526	20849665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_65616.known	chr16	+	2549	19	FSM	ENSG00000005189.20	ENST00000566993.5	2549	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	9.87452139799728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAATGCCTAAAGTTCA	18	True	NA	-15	True	NA	NA	NA	20806495	20849639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814984_20815054_20816115_20816213_20821761_20821903_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_65623.known	chr16	+	857	5	FSM	ENSG00000102897.10	ENST00000568663.5	857	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	68.854919940408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCCTAGAGTTTCTCA	15	True	NA	NA	False	NA	NA	NA	20899901	20924263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900005_20900297_20900536_20915555_20915715_20920121_20920215_20923999
transcript_65625.known	chr16	+	1626	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	56.8391370448215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	38	False	NA	9	True	AATAAA	-15	NA	20900752	20925004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
transcript_65629.known	chr16	+	1378	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	44.6119067315243	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	-4	True	NA	11	True	AATAAA	-17	NA	20900770	20925006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
transcript_65630.known	chr16	+	931	4	FSM	ENSG00000102897.10	ENST00000562740.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63.92356546863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCGGAAGGATGTAAG	3	True	NA	NA	False	NA	NA	NA	20900665	20924381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900890_20902485_20902718_20920121_20920215_20923999
transcript_65632.nnic	chr16	+	1290	3	NIC	ENSG00000102897.10	novel	1378	4	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	78	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	4	True	NA	11	True	AATAAA	-17	NA	20900699	20925006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_20900890_20920121_20920215_20923999
transcript_65633.known	chr16	+	1593	7	FSM	ENSG00000011638.11	ENST00000573487.5	1593	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	42.2311759512119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACAAGCCCTTCTGTGG	4828	False	NA	NA	False	AATGAA	-16	NA	21158376	21179987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21178796_21178933_21179474
transcript_65637.known	chr16	+	1378	6	FSM	ENSG00000011638.11	ENST00000451578.6	1378	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	47.4737822381996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTTTTTTTTTT	10	True	NA	NA	False	NA	NA	NA	21158688	21180220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21179474
transcript_65643.known	chr16	+	713	6	FSM	ENSG00000011638.11	ENST00000572599.5	713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.2990066116245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTATGGCTTAGAAGA	26	False	NA	NA	False	NA	NA	NA	21158704	21179612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21160977_21161009_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_65649.known	chr16	+	1717	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.4693686064843	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	-5	True	NA	21	True	AATAAA	-27	NA	21158673	21180616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_65652.known	chr16	+	1812	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.0415945787923	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	0	True	NA	14	True	AATAAA	-20	NA	21158678	21180609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
transcript_65656.known	chr16	+	584	4	FSM	ENSG00000011638.11	ENST00000572258.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	46.2048578494609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGATTATGGCTTAGA	-18	True	NA	NA	False	NA	NA	NA	21158660	21179609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21179474
transcript_65658.nic	chr16	+	1768	4	NIC	ENSG00000011638.11	novel	1812	5	NA	NA	-70	0	intron_retention	FALSE	canonical	3	10	junction_3	47.5558151602468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	5042	False	NA	21	True	AATAAA	-27	NA	21158590	21180616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_21158747_21160977_21161279_21170436_21170606_21179474
transcript_6566.known	chr1	+	4865	11	FSM	ENSG00000084652.16	ENST00000373610.8	4865	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	29.5298154413467	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	-5	True	NA	14	True	AATAAA	-16	NA	32179674	32198285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_65669.known	chr16	-	2774	12	FSM	ENSG00000180747.15	ENST00000522841.6	2774	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	83.0886214127089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTGGAGA	11	False	NA	NA	False	NA	NA	NA	21520444	21463204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_21463994_21464715_21464818_21467091_21467317_21469746_21469920_21471653_21471752_21472672_21472746_21473123_21473250_21476598_21476813_21478090_21478147_21479441_21479579_21484371_21484536_21519827
transcript_65679.known	chr16	-	416	2	FSM	ENSG00000180747.15	ENST00000435197.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCGTCCTGTGCTGCG	445	False	NA	NA	False	NA	NA	NA	21520010	21502088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_21502322_21519827
transcript_65681.nnic	chr16	-	1149	2	NNC	ENSG00000180747.15	novel	2774	12	NA	NA	-51	-4555	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATCCTTATTTTAGAT	NA	False	NA	2	True	AGTAAA	-26	NA	21520495	21506643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_21507125_21519827
transcript_65682.nnic	chr16	-	990	2	NNC	ENSG00000180747.15	novel	2774	12	NA	NA	-51	-4714	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCACAAATATAATTTGT	NA	False	NA	NA	False	NA	NA	NA	21520495	21506802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_21507125_21519827
transcript_65684.known	chr16	+	3153	5	FSM	ENSG00000197006.15	ENST00000358154.8	3153	5	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_4	148.578893184732	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	-31	True	NA	13	True	AATAAA	-19	NA	21599576	21657471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655226
transcript_65691.nic	chr16	+	1497	4	NIC	ENSG00000197006.15	novel	3153	5	NA	NA	-54	-186	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	382.275932918735	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGGCATCATGTTTG	713	False	NA	17	True	AATAAA	-13	NA	21599503	21655933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_21599899_21617864_21618075_21624930_21625116_21655226
transcript_65700.nic	chr16	-	494	2	ISM	ENSG00000248124.9	ENST00000551681.2	1178	8	-27	8731	-23	-8731	5prime_fragment	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCACGTAGAGATTTG	NA	False	NA	NA	False	NA	NA	NA	21820464	21819157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_21819482_21820294
transcript_65705.known	chr16	+	1914	14	FSM	ENSG00000140740.11	ENST00000268379.9	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_11	56.5333854340871	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATTCCCATTCATTC	-10	True	NA	56	True	AATAAA	-38	NA	21953360	21983660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407_21965506_21968627_21968686_21971524_21971621_21971922_21972123_21973895_21973977_21976166_21976244_21980546_21980701_21983087
transcript_65713.known	chr16	+	4469	3	FSM	ENSG00000185716.12	ENST00000542527.7	4469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTGAAAT	-6	True	NA	NA	False	AATAAA	-24	NA	22008110	22084654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22008408_22075486_22075700_22080695
transcript_65714.known	chr16	-	583	1	FSM	ENSG00000275445.1	ENST00000612618.1	583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCTGAATTCAATGGAG	6	True	NA	NA	False	AATAAA	-17	NA	22008062	22007479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_22007500_22008100
transcript_65719.nnic	chr16	+	5024	19	NNC	ENSG00000103319.12	novel	7398	18	NA	NA	-25	-600	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	15.2643375224737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTGGCCCTTTTGGGCTG	NA	False	NA	32	True	AATAAA	-17	NA	22206252	22286633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_22206680_22225653_22225976_22244629_22244731_22248754_22248816_22250653_22250692_22251150_22251323_22256747_22256898_22257252_22257386_22257642_22257771_22258493_22258696_22260461_22260530_22263109_22263188_22264817_22264881_22266389_22266525_22266687_22266877_22273625_22273751_22280197_22280377_22283886_22285611_22285904
transcript_65720.known	chr16	+	7398	18	FSM	ENSG00000103319.12	ENST00000263026.10	7398	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	7.78295538106623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTCAAATGTCTCC	-24	True	NA	20	True	AATAAA	-20	NA	22206277	22288738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22206680_22225653_22225976_22244629_22244731_22248754_22248816_22250653_22250692_22251150_22251323_22256747_22256898_22257252_22257386_22257642_22257771_22258493_22258696_22260461_22260530_22263109_22263188_22264817_22264881_22266389_22266525_22266687_22266877_22273625_22273751_22280197_22280377_22283886
transcript_65737.nic	chr16	+	1416	4	ISM	ENSG00000103319.12	ENST00000568269.5	2367	13	-73	15925	-25	-14002	5prime_fragment	FALSE	canonical	3	51	junction_2	4.92160768674447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAGAAAATAGAGTATTC	NA	False	NA	NA	False	GATAAA	-2	NA	22206252	22249320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_22206680_22225653_22225976_22244629_22244731_22248754
transcript_65744.known	chr16	+	3690	21	FSM	ENSG00000058600.16	ENST00000299853.10	3690	21	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	30.5697562960518	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATATGTCTCAGCTT	-11	True	NA	9	True	AGTAAA	-15	NA	22297408	22335096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_65747.known	chr16	+	2464	21	FSM	ENSG00000058600.16	ENST00000564209.5	2464	21	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_19	50.3403168444538	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAAATTCCTGATGTA	-9	True	NA	-56	True	NA	NA	NA	22297410	22333935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332122_22332186_22333643
transcript_6575.nnic	chr1	+	4620	10	NIC	ENSG00000084652.16	novel	4865	11	NA	NA	44	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	57.4224114203969	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	-6	True	NA	14	True	AATAAA	-16	NA	32179718	32198285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_32179777_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_65752.known	chr16	+	2469	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	44.2218030730997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	13	True	NA	34	True	AATAAA	-36	NA	22297432	22334025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
transcript_65755.known	chr16	+	3655	20	FSM	ENSG00000058600.16	ENST00000615879.4	3655	20	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	51.2580782093657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTCTCAGCTTTTCCA	NA	False	NA	14	True	AGTAAA	-20	NA	22297374	22335101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_65759.nic	chr16	+	2676	19	ISM	ENSG00000058600.16	ENST00000564209.5	2464	21	-49	4830	-13	14	5prime_fragment	FALSE	canonical	3	164	junction_5	18.6372950138184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCAGTTCTGTTCA	NA	False	NA	NA	False	AAGAAA	-12	NA	22297361	22329105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509
transcript_65762.known	chr16	+	4800	18	FSM	ENSG00000058600.16	ENST00000564061.5	4800	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	19.174485642488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACATAGA	35	False	NA	NA	False	NA	NA	NA	22297454	22329091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760
transcript_65770.known	chr16	-	3366	7	FSM	ENSG00000257122.5	ENST00000551766.5	3366	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	34.5784133046423	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATGCCTGGATCTCAC	NA	False	NA	80	True	AATAAA	-34	NA	22437715	22418671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_22420595_22426212_22426367_22429795_22429949_22432725_22432835_22434626_22434812_22435681_22435813_22437004
transcript_65779.known	chr16	-	2704	5	FSM	ENSG00000140743.8	ENST00000268383.7	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	3.26917420765551	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	-16	True	NA	NA	False	AATAAA	-19	NA	22374619	22345935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22364901_22365015_22374230
transcript_65783.known	chr16	+	2266	4	FSM	ENSG00000122254.7	ENST00000473392.1	2266	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCTCGTGTCCTTAAT	332	False	NA	18	True	AATAAA	-4	NA	22814496	22916319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22815096_22833275_22833449_22854663_22854782_22914943
transcript_65784.nnic	chr16	+	2467	3	NIC	ENSG00000122254.7	novel	2266	4	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCTCGTGTCCTTAAT	NA	False	NA	18	True	AATAAA	-4	NA	22814122	22916319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_22815096_22854663_22854782_22914943
transcript_65785.known	chr16	+	2329	2	FSM	ENSG00000122254.7	ENST00000261374.4	2329	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTTTTCTCTGTAA	-3	True	NA	37	True	AATAAA	-23	NA	22814161	22916338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22815096_22914943
transcript_65787.known	chr16	+	3477	13	FSM	ENSG00000166828.3	ENST00000300061.3	3477	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	2.59673940848048	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTCAAGTTTTGT	-4	True	NA	NA	False	AATAAA	-23	NA	23182744	23216883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23182814_23186227_23186589_23189370_23189672_23192351_23192543_23194170_23194275_23197263_23197428_23209749_23209849_23212033_23212152_23212677_23212757_23212836_23212895_23213101_23213164_23214711_23214788_23215088
transcript_65789.known	chr16	-	2935	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	15.0244592248773	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTGTTTCCTTCTTCT	-14	True	NA	-1	True	AATAAA	-20	NA	23453189	23388492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
transcript_65797.known	chr16	+	730	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	NA	False	NA	-5	True	NA	NA	NA	23452757	23457588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23453266_23455469_23455531_23457427
transcript_65798.nnic	chr16	+	891	3	NNC	ENSG00000260136.6	novel	579	2	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGAATGGAATTTTCT	NA	False	NA	7	True	AATAAA	-30	NA	23452753	23455786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_23453266_23454735_23454798_23455469
transcript_65799.known	chr16	+	579	2	FSM	ENSG00000260136.6	ENST00000565747.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	NA	False	NA	10	True	AATAAA	-33	NA	23453006	23455789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23453266_23455469
transcript_65802.known	chr16	+	438	2	FSM	ENSG00000260136.6	ENST00000562842.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATAGTCTTTTCTCAT	NA	False	NA	13	True	CATAAA	-16	NA	23453006	23457606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23453266_23457427
transcript_65812.known	chr16	-	5973	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	35.1425112043804	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTGTCGTCTTTTTT	-21	True	NA	-5	True	AATAAA	-15	NA	23510494	23463541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
transcript_6583.nic	chr1	+	1913	6	ISM	ENSG00000084652.16	ENST00000373610.8	4865	11	48	7172	48	-7172	5prime_fragment	FALSE	canonical	3	100	junction_1	36.642052344267	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGATGTCACTCCCTTTG	-2	True	NA	NA	False	NA	NA	NA	32179722	32191113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054
transcript_65844.known	chr16	-	3840	10	FSM	ENSG00000103356.18	ENST00000674054.1	3840	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	66.727379761808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGAAGCAGTATTTTT	-1	True	NA	-5	True	AGTAAA	-17	NA	23557350	23522016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23523418_23523510_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_65849.known	chr16	-	5196	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_6	17.1464281994822	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCTGTGCTATC	-1	True	NA	-28	True	AATAAA	-37	NA	23557350	23520753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_65858.known	chr16	+	4745	7	FSM	ENSG00000103353.16	ENST00000395878.8	4745	7	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	59.6165991053573	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGTCTCTTTTTCCTTCC	6	True	NA	14	True	ATTAAA	-14	NA	23557726	23574389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23557768_23557949_23558280_23559467_23559677_23562205_23562272_23562624_23562731_23566986_23567070_23570479
transcript_6586.known	chr1	+	5012	10	FSM	ENSG00000084652.16	ENST00000373609.1	5012	10	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_8	15.5761768078889	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	-25	True	NA	14	True	AATAAA	-16	NA	32180064	32198285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_65864.nnic	chr16	+	4741	6	NIC	ENSG00000103353.16	novel	4745	7	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	219.998727269046	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGTCTCTTTTTCCTTCC	31	False	NA	14	True	ATTAAA	-14	NA	23557647	23574389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_23557768_23557949_23558280_23559467_23559677_23562205_23562272_23562624_23562731_23570479
transcript_65867.nic	chr16	-	2712	5	ISM	ENSG00000103356.18	ENST00000563232.1	1709	8	-43	6032	-23	1491	5prime_fragment	FALSE	canonical	3	182	junction_2	16.0370664399696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCGACGTGGCGGGCG	NA	False	NA	NA	False	AATAGA	-15	NA	23557387	23531055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_6587.known	chr1	+	880	6	FSM	ENSG00000160050.16	ENST00000373602.10	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	16.1319558640606	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	-36	True	NA	NA	False	ATTAAA	-16	NA	32200594	32205387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597_32204621_32205193
transcript_65870.known	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_2	123.704284485219	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-5	True	NA	-27	True	AATAAA	-14	NA	23596316	23581013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
transcript_65871.known	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1574.63794780472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	34	False	NA	-27	True	AATAAA	-14	NA	23596277	23581013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
transcript_65873.known	chr16	-	4008	13	FSM	ENSG00000083093.10	ENST00000261584.9	4008	13	0	0	0	0	multi-exon	TRUE	canonical	1	44	junction_1	22.4405077680718	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTGGCATGTTATTG	-15	True	NA	-11	True	AATAAA	-17	NA	23641310	23603164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
transcript_65885.known	chr16	+	878	6	FSM	ENSG00000166847.10	ENST00000563998.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	149.418338901221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAACAGTCACTTTG	-16	True	NA	103	True	NA	NA	NA	23641470	23667371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
transcript_65886.known	chr16	+	10954	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	0	0	0	0	multi-exon	TRUE	canonical	3	341	junction_3	24.9158584038359	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	-21	True	NA	28	True	AATAAA	-31	NA	23641465	23677472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
transcript_65888.known	chr16	-	3337	22	FSM	ENSG00000134398.15	ENST00000256797.9	3337	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	3.19083153671447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATATTCTGTACAATT	0	True	NA	NA	False	CATAAA	-29	NA	23713222	23690309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23692183_23692332_23694727_23694928_23695018_23695119_23695199_23695390_23695893_23695979_23700538_23700705_23700958_23701115_23702151_23702274_23702389_23702538_23702623_23702703_23704882_23705148_23706329_23706432_23706753_23706862_23707006_23707080_23710171_23710245_23710515_23710550_23710912_23711019_23713094
transcript_65889.known	chr16	-	3169	21	FSM	ENSG00000134398.15	ENST00000457008.6	3169	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.20312347560939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTCCGAATTCAATAGA	-4	True	NA	NA	False	CATAAA	-13	NA	23713226	23690325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23692183_23692332_23694727_23694928_23695018_23695119_23695199_23695390_23695893_23695979_23700538_23700705_23702151_23702274_23702389_23702538_23702623_23702703_23704882_23705148_23706329_23706432_23706753_23706862_23707006_23707080_23710171_23710245_23710515_23710550_23710912_23711019_23713094
transcript_6589.known	chr1	+	1415	5	FSM	ENSG00000160050.16	ENST00000421922.6	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	14.8155323900291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	2	True	NA	NA	False	ATTAAA	-16	NA	32200632	32205387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597
transcript_65896.known	chr16	+	2160	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	0	0	0	0	multi-exon	TRUE	canonical	3	1524	junction_2	137.598449603669	687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTATTTCCTGAG	-16	True	NA	28	True	ATTAAA	-16	NA	23678888	23690367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
transcript_6590.known	chr1	+	2667	5	FSM	ENSG00000160050.16	ENST00000680046.1	2667	5	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_2	17.5285481429581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGGTACCGCCTGCG	22	True	NA	NA	False	NA	NA	NA	32200652	32205453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32200710_32201912_32204046_32204185_32204380_32204597_32204621_32205193
transcript_6591.known	chr1	+	2012	5	FSM	ENSG00000160051.12	ENST00000291358.11	2012	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3.93700393700591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	12	True	NA	12	True	AATAAA	-14	NA	32205670	32208682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207121_32207239
transcript_65916.known	chr16	+	1967	7	FSM	ENSG00000166869.3	ENST00000300113.3	1967	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	3.43592135468138	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTGTGAATGCATTCG	-6	True	NA	8	True	AATAAA	-15	NA	23755025	23758935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23755117_23755660_23755734_23755846_23755928_23756062_23756194_23756387_23756450_23757200_23757324_23757529
transcript_65923.nic	chr16	+	2059	8	ISM	ENSG00000122257.20	ENST00000567686.5	1138	10	1831	1860	-13	0	internal_fragment	FALSE	canonical	3	134	junction_3	16.034401791658	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	-4	True	NA	28	True	AATAAA	-36	NA	24539542	24559805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_65925.known	chr16	+	854	3	FSM	ENSG00000122257.20	ENST00000452655.6	854	3	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCATTTTCACGTT	889	False	NA	14	True	AATAAA	-17	NA	24540495	24549401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_24540793_24546162_24546263_24548944
transcript_65926.known	chr16	+	8303	24	FSM	ENSG00000090905.19	ENST00000315183.11	8303	24	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_7	84.5080951592687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	-20	True	NA	26	True	AATAAA	-19	NA	24729694	24826221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
transcript_6593.known	chr1	+	2089	4	FSM	ENSG00000160051.12	ENST00000617816.1	2089	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	3.68178700572909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGATGATGCCACTGC	12	True	NA	NA	False	NA	NA	NA	32205670	32208548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32205724_32206153_32206762_32207001_32207121_32207239
transcript_65935.nic	chr16	+	788	3	ISM	ENSG00000090905.19	ENST00000395799.8	8491	25	-492	75441	-492	0	5prime_fragment	FALSE	canonical	3	182	junction_2	22	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACGACAAGAAAAAGAAGGA	NA	False	NA	NA	False	AAAAAG	-7	NA	24729158	24750777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24729847_24730252_24730301_24750725
transcript_65937.nic	chr16	+	806	2	ISM	ENSG00000090905.19	ENST00000562829.1	277	3	-411	46514	-349	-20264	5prime_fragment	FALSE	canonical	3	226	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAAAGCAATTCTTGTAA	NA	False	NA	NA	False	TTTAAA	-15	NA	24729301	24730513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24729847_24730252
transcript_6594.known	chr1	+	3507	2	FSM	ENSG00000160050.16	ENST00000680626.1	3507	2	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGGGGGCGTTGAATGG	5	True	NA	NA	False	NA	NA	NA	32200635	32205345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32200710_32201912
transcript_65942.nic	chr16	-	3575	21	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	113.807941287065	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	NA	False	NA	-12	True	ATTAAA	-19	NA	25015406	24919394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_65944.known	chr16	-	3495	20	FSM	ENSG00000140750.17	ENST00000289968.11	3495	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	122.104741378196	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-21	True	NA	-6	True	ATTAAA	-25	NA	25015369	24919388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_65949.nic	chr16	-	3341	20	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	136.316033326342	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	NA	False	NA	-12	True	ATTAAA	-19	NA	25015406	24919394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_65950.known	chr16	-	3219	19	FSM	ENSG00000140750.17	ENST00000303665.9	3219	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	144.809410716634	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCATAATTCTTGGA	17	True	NA	-10	True	ATTAAA	-21	NA	25015331	24919392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_65962.known	chr16	+	1032	1	FSM	ENSG00000262587.3	ENST00000619106.1	1032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGCGGTGTCATTAGAGT	4	True	NA	11	True	ATTAAA	-24	NA	25031743	25032775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25031700_25032800
transcript_65963.known	chr16	-	534	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGATTTGCTTAGTGAAT	18	True	NA	-1	True	AATAAA	-18	NA	25107102	25106568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_25106600_25107100
transcript_65966.known	chr16	+	1529	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	291.248495189955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	-13	True	NA	31	True	AATAAA	-19	NA	25111730	25178231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_65967.nic	chr16	+	1424	11	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	247.678905036339	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	NA	False	NA	28	True	AATAAA	-16	NA	25111673	25178228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_65970.nic	chr16	+	1256	10	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	271.744978487797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGCCTGTGGTTGGACC	-2	True	NA	26	True	AATAAA	-14	NA	25111741	25178226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25178000
transcript_65974.known	chr16	+	1168	9	FSM	ENSG00000205629.12	ENST00000564011.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	256.903161473346	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTGTTTAAATAAATCTCA	-9	True	NA	-2	True	NA	NA	NA	25111734	25178198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_65977.known	chr16	+	1352	11	FSM	ENSG00000205629.12	ENST00000399069.8	1352	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	247.678905036339	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	-2	True	NA	28	True	AATAAA	-16	NA	25111741	25178228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_65978.known	chr16	+	3115	1	FSM	ENSG00000274925.1	ENST00000612792.1	3115	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTTTTGAGTTTTTG	358	False	NA	17	True	AATAAA	-22	NA	25257951	25261066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25258000_25261100
transcript_65982.known	chr16	+	2431	8	FSM	ENSG00000155666.12	ENST00000286096.9	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	7.02473763036814	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	0	True	NA	13	True	AATAGA	-20	NA	27203525	27221768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_65984.nic	chr16	+	2378	8	NIC	ENSG00000155666.12	novel	798	4	NA	NA	-47	-6	intron_retention	FALSE	canonical	0	0	junction_1	11.5369857768971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTGTTTTTTGTTTTT	230	False	NA	-39	True	NA	NA	NA	27203755	27221716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27203866_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_65985.nic	chr16	+	2386	7	NIC	ENSG00000155666.12	novel	2431	8	NA	NA	-37	-7	intron_retention	FALSE	canonical	1	1	junction_6	12.1712320201732	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTGCCCAGGCTGGTC	4359	False	NA	6	True	AATAGA	-13	NA	27203470	27221761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220565
transcript_65992.nnic	chr16	+	2134	6	NIC	ENSG00000155666.12	novel	2431	8	NA	NA	-37	-6	intron_retention	FALSE	canonical	1	1	junction_2	12.7216351150314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTGTTTTTTGTTTTT	4359	False	NA	-39	True	NA	NA	NA	27203470	27221716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27203637_27210092_27210622_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_65999.nnic	chr16	+	2089	5	NIC	ENSG00000155666.12	novel	2431	8	NA	NA	-37	-6	intron_retention	FALSE	canonical	1	1	junction_2	14.1950695665784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTGTTTTTTGTTTTT	4359	False	NA	-39	True	NA	NA	NA	27203470	27221716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27203637_27210092_27210622_27218960_27219111_27220392_27220486_27220565
transcript_6600.known	chr1	+	1416	11	FSM	ENSG00000084623.12	ENST00000677378.1	1416	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	486.799640509317	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222540_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66006.known	chr16	-	1042	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	5.01426536422407	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-18	True	NA	-4	True	AATAAA	-22	NA	27268772	27224993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_66010.nic	chr16	+	4017	12	NIC	ENSG00000077238.14	novel	3624	11	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	37.638120292777	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTATGTATTAACCAA	103	False	NA	32	True	AATAAA	-17	NA	27313823	27364777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27314021_27330065_27330199_27340185_27340274_27341069_27341314_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_66013.known	chr16	+	3624	11	FSM	ENSG00000077238.14	ENST00000395762.7	3624	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	13.9413055342748	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	40	True	NA	33	True	AATAAA	-18	NA	27313973	27364778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_66014.known	chr16	+	2900	11	FSM	ENSG00000077238.14	ENST00000568746.5	2900	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	39.7497169801245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCAGCCAGGCTGGCA	0	True	NA	NA	False	NA	NA	NA	27313933	27363903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27314021_27340185_27340274_27341069_27341314_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_66016.nic	chr16	+	3621	10	NIC	ENSG00000077238.14	novel	3624	11	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	33.9131061012125	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTATGTATTAACCAA	103	False	NA	32	True	AATAAA	-17	NA	27313823	27364777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_66017.known	chr16	+	3539	10	FSM	ENSG00000077238.14	ENST00000543915.6	3539	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	15.1249936230983	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	-8	True	NA	33	True	AATAAA	-18	NA	27313925	27364778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_66025.known	chr16	+	2953	9	FSM	ENSG00000103522.16	ENST00000395754.4	2953	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.72753437013566	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGGTCAAGTTGTTTGT	-4	True	NA	16	True	AATAAA	-33	NA	27427243	27450485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27427362_27430055_27430121_27434346_27434450_27437487_27437688_27442961_27443117_27444541_27444720_27445176_27445277_27446006_27446089_27448533
transcript_66029.known	chr16	-	7090	37	FSM	ENSG00000077235.18	ENST00000356183.9	7090	37	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_3	96.3669203271191	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-8	True	NA	-8	True	ATTAAA	-16	NA	27549913	27460612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464319_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_6603.known	chr1	+	1276	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	494.944895922768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
transcript_66031.known	chr16	-	7015	37	FSM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_29	76.2807719732798	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-8	True	NA	-8	True	ATTAAA	-16	NA	27549913	27460612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464394_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_66043.nic	chr16	-	2315	14	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	7	37075	7	-14550	5prime_fragment	FALSE	canonical	3	404	junction_6	69.399623142404	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATAATAAAATGGGCATA	-1	True	NA	NA	False	NA	NA	NA	27549906	27497687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_66044.nic	chr16	-	2299	14	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	-56	37154	-56	-14629	5prime_fragment	FALSE	canonical	3	404	junction_6	69.399623142404	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGAGGGCCCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	27549969	27497766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_66046.nic	chr16	-	1854	11	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	42322	0	-19797	5prime_fragment	FALSE	canonical	3	404	junction_3	71.6284859535646	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCGACTGCTGAAACGC	-8	True	NA	NA	False	NA	NA	NA	27549913	27502934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_66053.known	chr16	+	6624	28	FSM	ENSG00000047578.14	ENST00000261588.10	6599	28	0	-25	0	25	multi-exon	TRUE	canonical	3	19	junction_6	8.67663244682428	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCGAGTCACCGGATTT	-1	True	NA	NA	False	AATAAA	-18	NA	27550143	27780369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064_27631163_27648603_27648736_27677728_27677997_27681398_27681531_27698327_27698501_27699533_27699600_27701588_27701696_27703895_27703999_27708704_27708921_27721557_27721696_27740040_27740921_27749583_27750307_27751718_27751925_27754172_27754252_27761412_27761591_27766308_27766475_27769860_27770019_27771587_27771653_27773098_27773210_27774944_27775085_27776927_27777030_27777609_27777771_27777880_27777970_27778573
transcript_66062.known	chr16	-	4255	25	FSM	ENSG00000169180.12	ENST00000565698.5	4255	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_23	100.830087757684	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGGCTGGGGAGCTG	509	False	NA	-8	True	AATAAA	-22	NA	28211550	28097978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28208986_28209123_28211365
transcript_66065.known	chr16	-	4537	24	FSM	ENSG00000169180.12	ENST00000304658.10	4537	24	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_23	72.024045554219	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGGGGAGCTGCTT	-18	True	NA	-5	True	AATAAA	-25	NA	28211965	28097975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
transcript_6607.known	chr1	+	1256	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	534.424393248255	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	3	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66073.nic	chr16	-	5172	23	ISM	ENSG00000169180.12	ENST00000304658.10	4537	24	4	2179	4	900	5prime_fragment	FALSE	canonical	3	146	junction_22	72.9991650580577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCAGGTGTGGTGGCAC	-14	True	NA	NA	False	AATAAA	-6	NA	28211961	28100154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
transcript_66082.known	chr16	-	2481	2	FSM	ENSG00000246465.1	ENST00000501520.1	2481	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGTAAATTCTTTC	-9	True	NA	NA	False	NA	NA	NA	28292064	28284884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28287068_28291766
transcript_66084.known	chr16	+	4986	4	FSM	ENSG00000188322.8	ENST00000341901.5	4986	4	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	73.5436378394941	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	11	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075
transcript_66086.known	chr16	-	1329	7	FSM	ENSG00000198156.10	ENST00000533640.5	1329	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.98607881119482	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	NA	False	NA	NA	False	AAAAAG	-41	NA	28356654	28342554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28343189_28344547_28344584_28344692_28344754_28348833_28349030_28349141_28349242_28352878_28353062_28356535
transcript_66092.nnic	chr16	-	2949	21	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	3	138	junction_20	922.322366366554	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-1	True	NA	NA	False	ACTAAA	-16	NA	28403834	28379714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403743
transcript_66093.known	chr16	-	2913	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	0	0	0	multi-exon	FALSE	canonical	3	2702	junction_12	503.475845994622	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-8	True	NA	NA	False	ACTAAA	-16	NA	28403841	28379714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
transcript_6610.known	chr1	+	1400	10	FSM	ENSG00000084623.12	ENST00000678883.1	1400	10	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	240.608231338112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGATCTCCAACCA	3	True	NA	-66	True	AAAAAG	-2	NA	32222423	32231505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926
transcript_66107.nic	chr16	-	455	4	ISM	ENSG00000205609.13	ENST00000380876.5	2913	21	-13	21492	-13	-21492	5prime_fragment	FALSE	canonical	3	3244	junction_3	413.287094187832	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATGCCTATATTTATT	NA	False	NA	NA	False	NA	NA	NA	28403854	28401206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_28401397_28401538_28401605_28403517_28403649_28403786
transcript_6611.known	chr1	+	1343	10	FSM	ENSG00000084623.12	ENST00000677767.1	1343	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	524.249516504837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTTGTGGTGTCTGTT	3	True	NA	29	True	AATAAA	-30	NA	32222406	32231600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32230926_32231020_32231114
transcript_66112.known	chr16	-	1685	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	49.2474928859892	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-12	True	NA	-6	True	AATAAA	-20	NA	28492074	28477278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_6612.known	chr1	+	1200	10	FSM	ENSG00000084623.12	ENST00000677580.1	1200	10	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_5	520.01334265883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCACAGAAGGTTTTGAA	12	False	NA	-34	True	AAAAAG	-34	NA	32222432	32231537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66120.known	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_10	33.9255637764654	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-12	True	NA	1	True	AATAAA	-27	NA	28492074	28477271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_66122.known	chr16	-	1452	15	FSM	ENSG00000188603.22	ENST00000567963.6	1452	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	64.9621946573072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAACTGTGCTCCCAGC	-12	True	NA	NA	False	NA	NA	NA	28492074	28477432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713_28491836_28492019
transcript_66126.known	chr16	-	1616	15	FSM	ENSG00000188603.22	ENST00000568452.6	1616	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	50.6907390004147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGAGACCCTCCATG	16	True	NA	NA	False	NA	NA	NA	28492046	28477447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_6613.known	chr1	+	1503	10	FSM	ENSG00000084623.12	ENST00000677676.1	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	248.583294533216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66130.known	chr16	-	1720	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	56.0089806830991	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATATCGTTTTTGT	3565	False	NA	-7	True	AATAAA	-19	NA	28492005	28477279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_66132.known	chr16	-	1608	14	FSM	ENSG00000188603.22	ENST00000333496.14	1608	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	66.2831473400424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACTTCTTATATCGTT	3679	False	NA	-12	True	AATAAA	-14	NA	28491891	28477284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28489289_28489387_28491481_28491561_28491713
transcript_66133.known	chr16	-	1536	14	FSM	ENSG00000188603.22	ENST00000636172.1	1536	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	63.0762664130922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	4	True	NA	NA	False	GGGGCT	-44	NA	28492058	28477515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_66135.known	chr16	-	1173	14	FSM	ENSG00000188603.22	ENST00000355477.10	1173	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	64.0437165781007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	3811	False	NA	NA	False	GGGGCT	-44	NA	28491759	28477515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_66137.known	chr16	-	1957	14	FSM	ENSG00000188603.22	ENST00000561689.6	1957	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	35.0966543694551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGACTTCTTATAT	18	True	NA	-16	True	AATAAA	-10	NA	28492044	28477288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_6614.known	chr1	+	1250	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	532.259288897135	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	7	False	NA	33	True	AATAAA	-34	NA	32222427	32231604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66143.known	chr16	-	1577	13	FSM	ENSG00000188603.22	ENST00000637578.1	1577	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	78.8565416859417	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCCAGCCATTGTCTC	-3	True	NA	-88	True	NA	NA	NA	28492023	28477360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_66145.known	chr16	-	1224	13	FSM	ENSG00000188603.22	ENST00000636228.1	1224	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	78.8424941823183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGGCAGAGGGACAGG	3714	False	NA	NA	False	NA	NA	NA	28491856	28477482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_66147.known	chr16	-	1606	13	FSM	ENSG00000188603.22	ENST00000637871.1	1606	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	74.3693858758801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCACCCCAGAGACCCTC	-12	True	NA	NA	False	NA	NA	NA	28492074	28477451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_66149.known	chr16	-	1968	13	FSM	ENSG00000188603.22	ENST00000568076.6	1968	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_12	53.0714272362152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATCCATGGACTTCT	-8	True	NA	-21	True	AATAAA	-5	NA	28492070	28477293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_66156.known	chr16	-	1430	11	FSM	ENSG00000188603.22	ENST00000395653.9	1430	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	102.781564494806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-3	True	NA	-18	True	AATAAA	-8	NA	28492023	28477290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_66161.nic	chr16	+	1270	11	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_5	50.3531528307811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTCTCCTGGGTTTTA	NA	False	NA	20	True	ATTAAA	-14	NA	28553888	28591788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28588609_28588692_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_66164.nnic	chr16	+	1734	10	NNC	ENSG00000176476.9	novel	1159	10	NA	NA	-26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.6223194747195	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTACTCGTCTCCTGGGTT	NA	False	NA	17	True	ATTAAA	-11	NA	28553888	28591785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591040
transcript_66165.known	chr16	+	1159	10	FSM	ENSG00000176476.9	ENST00000317058.8	1159	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	9.44117590499911	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	-3	True	NA	22	True	ATTAAA	-16	NA	28553919	28591790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_66169.nic	chr16	+	1840	9	ISM	ENSG00000176476.9	ENST00000317058.8	1159	10	-31	4	-26	-2	intron_retention	FALSE	canonical	3	110	junction_1	9.97183533758957	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTCGTCTCCTGGGTTT	NA	False	NA	18	True	ATTAAA	-12	NA	28553888	28591786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772
transcript_66177.known	chr16	-	1162	8	FSM	ENSG00000196502.13	ENST00000314752.12	1569	8	37	370	-17	0	multi-exon	FALSE	canonical	3	20	junction_6	11.7438650940369	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	3	True	NA	-26	True	NA	NA	NA	28610007	28605627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930
transcript_6618.known	chr1	+	1141	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	527.063800692098	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66181.known	chr16	-	1578	7	FSM	ENSG00000196502.13	ENST00000569554.5	1578	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	12.6282311596764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCGGGC	1146	False	NA	NA	False	ACTAAA	-11	NA	28608920	28605195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707
transcript_66185.known	chr16	+	738	5	FSM	ENSG00000176476.9	ENST00000569581.1	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	10.6770782520313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCAGTCGCCCCCTC	-3	True	NA	NA	False	NA	NA	NA	28553919	28589420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099
transcript_66189.known	chr16	+	764	3	FSM	ENSG00000176476.9	ENST00000564682.5	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATGATGGAGAAAAGGTAA	-8	True	NA	NA	False	NA	NA	NA	28553914	28585403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28554098_28581054_28581145_28584912
transcript_66190.known	chr16	-	5291	3	FSM	ENSG00000176046.9	ENST00000324873.8	5291	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTCAATTACTCCTC	-8	True	NA	NA	False	AATGAA	-21	NA	28538974	28532707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28537670_28538005_28538156_28538795
transcript_66191.known	chr16	-	432	1	FSM	ENSG00000275441.1	ENST00000613454.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTGCTGCTTGCTGG	49	False	NA	0	True	AATAAA	-28	NA	28554140	28553708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28553700_28554100
transcript_66193.known	chr16	+	3128	21	FSM	ENSG00000184110.15	ENST00000566501.5	3128	21	0	0	0	0	multi-exon	TRUE	canonical	2	72	junction_1	892.055906319778	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGATTGCTTGTTGC	NA	False	NA	NA	False	ACTAAA	-18	NA	28688557	28735598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28688829_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_66194.known	chr16	+	3137	21	FSM	ENSG00000184110.15	ENST00000395587.5	3137	21	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	854.043469326942	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGCTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	28711416	28735727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_66199.known	chr16	+	2910	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	0	0	0	0	multi-exon	FALSE	canonical	3	3157	junction_1	369.781459107944	4027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-6	True	NA	NA	False	ACTAAA	-16	NA	28711463	28735596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_66200.known	chr16	+	2870	21	FSM	ENSG00000184110.15	ENST00000564243.5	2870	21	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	911.445176628852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	4	True	NA	NA	False	ACTAAA	-16	NA	28711473	28735596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714350_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_66201.known	chr16	+	2986	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	3269	junction_7	344.966857776206	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	33	False	NA	NA	False	ACTAAA	-17	NA	28711526	28735597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_66205.nnic	chr16	+	4301	24	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	-285	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_22	163.765069870351	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	1	True	NA	24	True	AATAAA	-31	NA	28822713	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
transcript_66208.nic	chr16	+	4178	24	NIC	ENSG00000168488.19	novel	3807	23	NA	NA	-285	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_22	167.978675845336	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	1	True	NA	24	True	AATAAA	-31	NA	28822713	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
transcript_66212.known	chr16	+	3981	24	FSM	ENSG00000168488.19	ENST00000395547.6	3981	24	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_22	196.376706775735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28	True	NA	24	True	AATAAA	-31	NA	28823092	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836325_28836491_28836727
transcript_66216.nnic	chr16	+	3943	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_22	179.54579324355	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	550	False	NA	24	True	AATAAA	-31	NA	28824055	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
transcript_66220.nic	chr16	+	3820	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_22	183.337809420067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	550	False	NA	24	True	AATAAA	-31	NA	28824055	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
transcript_66229.known	chr16	+	3807	23	FSM	ENSG00000168488.19	ENST00000340394.12	3807	23	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_22	132.398979110194	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	-17	True	NA	24	True	AATAAA	-31	NA	28823047	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
transcript_66230.known	chr16	+	3739	23	FSM	ENSG00000168488.19	ENST00000382686.8	3739	23	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_22	151.913640375812	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28	True	NA	24	True	AATAAA	-31	NA	28823092	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836750
transcript_66231.known	chr16	+	3635	23	FSM	ENSG00000168488.19	ENST00000570200.5	3635	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_22	161.189797525917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTTAAACTAACTT	13	True	NA	2	True	AATAAA	-9	NA	28823251	28837215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836727
transcript_66232.known	chr16	+	3788	23	FSM	ENSG00000168488.19	ENST00000325215.10	3788	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	163.63510731841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28	True	NA	19	True	AATAAA	-26	NA	28823092	28837232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836750
transcript_66239.nic	chr16	+	3783	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_1	153.423150870853	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	550	False	NA	24	True	AATAAA	-31	NA	28824055	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
transcript_66240.nic	chr16	+	3760	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_22	170.287026774218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	550	False	NA	24	True	AATAAA	-31	NA	28824055	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836750
transcript_66242.nic	chr16	+	4146	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-82	0	intron_retention	FALSE	canonical	3	187	junction_1	150.959958568188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	550	False	NA	24	True	AATAAA	-31	NA	28824055	28837237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836486_28836727
transcript_66248.known	chr16	+	4456	22	FSM	ENSG00000168488.19	ENST00000336783.9	4456	22	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	90.5699514175272	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	-66	True	NA	19	True	AATAAA	-26	NA	28822998	28837232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932
transcript_66257.nic	chr16	+	4383	22	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-82	0	intron_retention	FALSE	canonical	3	187	junction_1	121.915233925209	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	550	False	NA	19	True	AATAAA	-26	NA	28824055	28837232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932
transcript_66304.known	chr16	-	2011	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	0	0	0	multi-exon	TRUE	canonical	3	1397	junction_5	90.0634892659919	5478	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTCAGTGAAGTT	14	False	28846362	-15	True	AATAAA	-16	NA	28846348	28842410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
transcript_66356.nic	chr16	+	3149	11	NIC	ENSG00000178188.15	novel	3095	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	44.7303029276574	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	-13	True	NA	17	True	AATAAA	-18	NA	28846600	28874201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28846828_28863667_28863755_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_66366.nic	chr16	+	2988	10	NIC	ENSG00000178188.15	novel	3033	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	21.8756305023774	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	-6	True	NA	17	True	AATAAA	-18	NA	28863792	28874201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_66367.known	chr16	+	3033	10	FSM	ENSG00000178188.15	ENST00000359285.9	3033	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	37.1227526650718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	6	True	NA	21	True	AATAAA	-22	NA	28863804	28874205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872759_28873169_28873270_28873446
transcript_6637.known	chr1	+	987	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	589.200211209135	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66372.nnic	chr16	+	4530	10	NNC	ENSG00000178188.15	novel	2529	10	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.8422469533743	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	86	False	NA	17	True	AATAAA	-18	NA	28863929	28874201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_28865625_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_66375.nnic	chr16	+	3220	10	NNC	ENSG00000178188.15	novel	2529	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.9333079654915	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	-18	True	NA	17	True	AATAAA	-18	NA	28863953	28874201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_28864339_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_66384.known	chr16	+	6043	9	FSM	ENSG00000178188.15	ENST00000337120.9	6043	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	17.7372313228418	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	NA	False	NA	17	True	AATAAA	-18	NA	28862803	28874201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_66385.known	chr16	+	3532	22	FSM	ENSG00000196296.14	ENST00000357084.7	3532	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.82951995943166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGCCTCTGTGCAAG	9	True	NA	3	True	AATAAA	-14	NA	28878404	28904464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28878790_28879098_28879117_28879500_28879584_28880914_28881020_28882450_28882590_28884574_28884656_28887188_28887275_28887424_28887723_28888786_28888954_28894154_28894244_28894504_28894608_28894821_28894954_28897999_28898126_28898232_28898452_28900580_28900917_28901862_28902084_28902183_28902387_28902579_28902666_28902777_28902912_28903029_28903148_28903322_28903441_28904179
transcript_66398.nic	chr16	-	2409	12	ISM	ENSG00000177548.13	ENST00000358201.9	2307	13	385	0	-26	0	3prime_fragment	TRUE	canonical	3	75	junction_4	10.6948663053474	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	870	False	NA	-3	True	AATAAA	-17	NA	28924853	28904420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402
transcript_66401.known	chr16	-	1645	12	FSM	ENSG00000177548.13	ENST00000544477.5	1645	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	27.7056547618916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGACTGACGGGGGCCA	11	True	NA	NA	False	NA	NA	NA	28925196	28904827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28925102
transcript_66413.nnic	chr16	-	448	3	FSM	ENSG00000260442.6	ENST00000686287.1	437	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	37	junction_1	21.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-33	True	NA	-8	True	ATTAAA	-19	NA	28879949	28878956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28879108_28879541_28879756_28879866
transcript_66416.known	chr16	-	558	2	FSM	ENSG00000260442.6	ENST00000561547.5	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	21	True	NA	-8	True	ATTAAA	-19	NA	28879895	28878956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28879108_28879488
transcript_66417.known	chr16	-	530	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	16	0	16	0	multi-exon	FALSE	canonical	3	37	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-4	True	NA	-8	True	ATTAAA	-19	NA	28879920	28878956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28879108_28879541
transcript_66418.known	chr16	-	557	2	FSM	ENSG00000177548.13	ENST00000564579.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGCAGTGATTCTAGG	-9	True	NA	NA	False	NA	NA	NA	28924710	28919694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28919944_28924402
transcript_66419.known	chr16	-	2307	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	10.6258986548067	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-31	True	NA	-3	True	AATAAA	-17	NA	28925238	28904420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
transcript_66420.known	chr16	+	3493	23	FSM	ENSG00000196296.14	ENST00000395503.9	3493	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.14500479884764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCTCTGTGCAAGCT	-1	True	NA	5	True	AATAAA	-16	NA	28878487	28904466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28878790_28879098_28879117_28879500_28879584_28880914_28881020_28882450_28882590_28884574_28884656_28887188_28887275_28887424_28887723_28888786_28888954_28894154_28894244_28894504_28894608_28894821_28894954_28897999_28898126_28898232_28898452_28900580_28900917_28901862_28902084_28902183_28902387_28902579_28902666_28902777_28902912_28903029_28903148_28903322_28903441_28903699_28903742_28904179
transcript_66421.known	chr16	+	4569	8	FSM	ENSG00000176953.13	ENST00000320805.9	4564	8	0	-5	0	5	multi-exon	FALSE	canonical	3	233	junction_3	14.7786387487247	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTGGAGGATTTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	28950936	28967097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28951399_28952131_28952205_28954564_28954683_28955977_28956059_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_66426.nnic	chr16	+	1993	7	NIC	ENSG00000176953.13	novel	4564	8	NA	NA	-4	389	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	96.5205792679583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACGTTTCATGTGTGAA	4	True	NA	11	True	NA	NA	NA	28951002	28964668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28951399_28952131_28952205_28954564_28954683_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_66440.known	chr16	+	823	2	FSM	ENSG00000176953.13	ENST00000565752.5	823	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATGCATTTTTTGCAA	8	True	NA	NA	False	NA	NA	NA	28951006	28952562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28951399_28952131
transcript_66455.known	chr16	+	1979	13	FSM	ENSG00000169682.18	ENST00000565975.5	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	147.35416519393	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCCTGCTCTCGTCTTTC	-10	True	NA	18	True	AATAAA	-19	NA	28974771	28984548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_66464.known	chr16	+	2102	13	FSM	ENSG00000169682.18	ENST00000323081.12	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	155.412957953962	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	12	True	NA	13	True	AATAAA	-14	NA	28974793	28984543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_66466.nic	chr16	+	2128	13	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	175.634563796537	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-13	True	NA	10	True	AATAAA	-11	NA	28974768	28984540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_66469.nnic	chr16	+	1883	13	NIC	ENSG00000169682.18	novel	1979	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	184.527079464114	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-9	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28974864_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_66473.known	chr16	+	2205	12	FSM	ENSG00000169682.18	ENST00000311008.16	2205	12	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_6	74.0115023448304	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	-4	True	NA	13	True	AATAAA	-14	NA	28974777	28984543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_6649.known	chr1	-	972	5	FSM	ENSG00000160055.20	ENST00000487174.1	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	23.9217474278114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGCTACCTCATGGA	26	False	NA	NA	False	NA	NA	NA	32222319	32216729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866
transcript_66491.known	chr16	+	2027	11	FSM	ENSG00000169682.18	ENST00000334536.12	2027	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	187.77031181739	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGCCTGCTCTCGTC	19	False	NA	14	True	AATAAA	-15	NA	28974800	28984544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_6650.known	chr1	-	1107	5	FSM	ENSG00000160055.20	ENST00000309777.11	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	16.0390149323454	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-8	True	NA	-2	True	AATAAA	-16	NA	32222353	32216199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_66513.known	chr16	+	2253	5	FSM	ENSG00000169682.18	ENST00000568900.5	2253	5	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_3	52.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATACAAAAAAAAATTA	-4	True	NA	NA	False	NA	NA	NA	28974777	28980687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404
transcript_66520.known	chr16	+	1713	12	NNC	ENSG00000213658.13	novel	1448	13	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_5	5.42872677339404	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAAGTAACTGAAAAAGT	14	False	NA	27	True	AATAAA	-18	NA	28985065	28990783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_28985518_28985712_28985741_28985853_28985889_28986134_28986217_28986381_28986400_28986429_28986447_28986539_28986715_28986798_28986894_28989526_28989590_28989773_28989840_28989932_28990020_28990188
transcript_66521.known	chr16	-	1840	2	FSM	ENSG00000260908.1	ENST00000562618.1	1840	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29107711	29103656	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29105140_29107354
transcript_66542.known	chr16	+	1356	8	FSM	ENSG00000213648.11	ENST00000360423.12	1356	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	77.8357768848317	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	28	False	NA	11	True	AATAAA	-19	NA	29459912	29464966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29459986_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
transcript_66548.known	chr16	+	1165	6	FSM	ENSG00000181625.17	ENST00000330181.9	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	128.219499297104	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	-1	True	NA	NA	False	AATAAA	-14	NA	29454500	29458219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29454931_29455397_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
transcript_66559.known	chr16	+	762	5	FSM	ENSG00000181625.17	ENST00000351581.4	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	401.850329724886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	33	False	NA	NA	False	AATAAA	-14	NA	29454561	29458219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29454931_29455397_29455450_29457631_29457760_29457927_29458016_29458094
transcript_66561.known	chr16	-	937	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_3	984.792363902158	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTGATAAGTTTTT	3	True	NA	NA	False	NA	NA	NA	29454347	29443229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
transcript_66563.known	chr16	-	1305	5	FSM	ENSG00000261740.7	ENST00000568556.2	1305	5	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	994.003521120524	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGCCATTATATTTA	375	False	NA	NA	False	AATAAA	-14	NA	29454651	29443269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29454015_29454114_29454190
transcript_66566.known	chr16	-	1012	3	FSM	ENSG00000183336.9	ENST00000330978.4	399	3	-613	0	-613	0	multi-exon	FALSE	canonical	3	2413	junction_1	236.5	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	62	False	NA	NA	False	ATTAAA	-14	NA	29454964	29453592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29453733_29454015_29454114_29454190
transcript_66567.known	chr16	+	418	1	FSM	ENSG00000279228.2	ENST00000624430.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTTTCTTGTGCACTT	5724	False	NA	NA	False	AATAAA	-15	NA	29467160	29467578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29467200_29467600
transcript_66568.nnic	chr16	-	2520	14	Fusion	ENSG00000279583.1_ENSG00000205534.6	novel	4221	29	NA	NA	-415	-17443	multi-exon	TRUE	canonical	3	15	junction_13	183.115509831441	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	6	True	NA	NA	False	AATAAA	-35	NA	29595381	29545010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29594886
transcript_66569.nnic	chr16	-	2649	14	Fusion	ENSG00000205534.6_ENSG00000260727.2	novel	4221	29	NA	NA	-86	-17443	multi-exon	FALSE	canonical	3	25	junction_13	182.435009097428	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	-1	True	NA	NA	False	AATAAA	-35	NA	29613726	29545010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29613102
transcript_6657.known	chr1	+	1715	12	FSM	ENSG00000084623.12	ENST00000678150.1	1715	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	611.590826323429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGCCCTTCTGAATGT	3	True	NA	NA	False	AATAAA	-19	NA	32222406	32236170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32234423_32234550_32235512
transcript_66571.nnic	chr16	-	2650	13	Fusion	ENSG00000205534.6_ENSG00000260727.2	novel	4221	29	NA	NA	-145	-17443	multi-exon	FALSE	canonical	3	34	junction_12	184.962815332043	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	NA	False	NA	NA	False	AATAAA	-35	NA	29613785	29545010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29613102
transcript_6658.known	chr1	+	1482	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_6	148.507222254436	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	16	False	NA	31	True	AATAAA	-32	NA	32222436	32231602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_66586.known	chr16	+	913	3	FSM	ENSG00000103485.19	ENST00000219771.7	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	349.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAGACCAGCCTGG	NA	False	NA	NA	False	NA	NA	NA	29679007	29697776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29679211_29696995_29697128_29697198
transcript_6659.known	chr1	-	721	6	FSM	ENSG00000160055.20	ENST00000344461.7	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.3597520645281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	7	True	NA	-2	True	AATAAA	-16	NA	32222338	32216199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_66592.known	chr16	+	7252	2	FSM	ENSG00000197471.12	ENST00000652691.1	7252	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTCAAAAAGGTGTTC	0	True	NA	92	True	AATAAA	-29	NA	29663246	29670876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29663317_29663694
transcript_66593.known	chr16	+	2200	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	49.8285950924656	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	20	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
transcript_66594.known	chr16	+	1853	3	FSM	ENSG00000197471.12	ENST00000563039.2	1853	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTCAAAAAGGTGTTC	8	False	NA	92	True	AATAAA	-29	NA	29663254	29670876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29663317_29663694_29665082_29670472
transcript_66622.known	chr16	+	2081	14	FSM	ENSG00000079616.14	ENST00000160827.9	2081	14	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_8	89.840489810928	5659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	10	True	NA	25	True	AATACA	-15	NA	29790750	29805384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_66637.known	chr16	+	2493	14	FSM	ENSG00000079616.14	ENST00000400751.9	2493	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	408.196292263601	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	191	False	NA	25	True	AATACA	-15	NA	29790970	29805384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29791462_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_66638.known	chr16	+	2505	14	FSM	ENSG00000079616.14	ENST00000561482.6	2256	14	-249	0	-8	0	multi-exon	TRUE	canonical	0	0	junction_1	408.196292263601	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	-22	True	NA	25	True	AATACA	-15	NA	29790718	29805384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29791222_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_6666.known	chr1	+	2166	13	FSM	ENSG00000182866.17	ENST00000333070.4	2166	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	48.0199611272923	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATCTCTTTGCTGTCCA	10	False	NA	15	True	AATAAA	-19	NA	32274131	32286162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279580_32279748_32279840_32279995_32280078_32280211_32285513
transcript_6667.known	chr1	+	2099	13	FSM	ENSG00000182866.17	ENST00000619559.4	2099	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	12.8376616077678	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	NA	False	NA	17	True	AATAAA	-21	NA	32274110	32286164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_6672.nic	chr1	+	2159	13	NIC	ENSG00000182866.17	novel	2099	13	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	48.6183407322335	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	NA	False	NA	17	True	AATAAA	-21	NA	32274071	32286164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_32274227_32274303_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_66734.known	chr16	+	2403	4	FSM	ENSG00000167371.21	ENST00000572820.2	2403	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.1367254727886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGTTGGTTCCTGCGTT	29	True	NA	18	True	AATAAA	-28	NA	29812290	29815892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812352_29812989_29813934_29814332_29814466_29814627
transcript_66736.known	chr16	+	1593	4	FSM	ENSG00000103495.15	ENST00000568282.1	1593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	479.55627638706	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACCCCATTACAATAAAT	8	True	NA	-23	True	NA	NA	NA	29808145	29811128	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29808294_29808569_29808742_29809539_29809772_29810087
transcript_66737.known	chr16	+	2462	4	FSM	ENSG00000167371.21	ENST00000358758.12	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	38.3782345723313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCTCCAATCTCGGTTG	-3	True	NA	7	True	AATAAA	-17	NA	29812192	29815881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812324_29812989_29813934_29814332_29814466_29814627
transcript_66738.known	chr16	+	2867	2	FSM	ENSG00000167371.21	ENST00000647876.1	2867	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTACAACGCGGTTCGGA	1442	False	NA	-30	True	NA	NA	NA	29812149	29815682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812324_29812989
transcript_66739.known	chr16	+	3002	2	FSM	ENSG00000167371.21	ENST00000300797.7	3002	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTCCAATCTCGGTT	-21	True	NA	6	True	AATAAA	-16	NA	29812240	29815880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812352_29812989
transcript_6674.nic	chr1	+	2003	12	NIC	ENSG00000182866.17	novel	2099	13	NA	NA	-57	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_7	49.6093832766636	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	NA	False	NA	17	True	AATAAA	-21	NA	32274053	32286164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_66740.known	chr16	+	3874	3	FSM	ENSG00000280789.2	ENST00000320330.8	3874	3	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	1	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTGTGTCCTTGTT	5	True	NA	21	True	NA	NA	NA	29816151	29822489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29817008_29817209_29817293_29819554
transcript_66741.known	chr16	+	2798	15	FSM	ENSG00000013364.19	ENST00000357402.10	2798	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.35679610833356	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAATTTCAACACTTTT	3	True	NA	10	True	AATACA	-18	NA	29820461	29848021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29820511_29830514_29830675_29830877_29831074_29833732_29833857_29833934_29834067_29835703_29835799_29836721_29836959_29840177_29840460_29841595_29841841_29841914_29842113_29844492_29844880_29845862_29845980_29846157_29846285_29847196_29847386_29847761
transcript_66742.known	chr16	+	1461	3	FSM	ENSG00000103495.15	ENST00000563402.1	1461	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	400.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTTCTGGCTCTGGA	38	False	NA	7	True	AATAAA	-12	NA	29806570	29811158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29806894_29806977_29807067_29810109
transcript_66743.known	chr16	+	1464	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_2	211.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	240	False	NA	-26	True	NA	NA	NA	29808050	29811125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29808294_29808569_29808742_29810076
transcript_66748.known	chr16	-	1015	6	FSM	ENSG00000103502.14	ENST00000564296.5	1015	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	180.653701871841	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGCTGTGCCACACAG	9210	False	NA	NA	False	NA	NA	NA	29863276	29859149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862636_29862814
transcript_66750.known	chr16	-	1843	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_4	11.2960169971544	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGAGTGTGG	-18	True	NA	-13	True	AATAAA	-18	NA	29863226	29858356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_66754.known	chr16	-	1671	5	FSM	ENSG00000103502.14	ENST00000566113.5	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	205.263854587212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCTGTCAATGAGTTGG	4	True	NA	-28	True	AATAAA	-3	NA	29863204	29858371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862814
transcript_66758.known	chr16	-	1047	5	FSM	ENSG00000103502.14	ENST00000563415.1	1047	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	203.517812488244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTGGCGGGACTTCAC	9596	False	NA	NA	False	NA	NA	NA	29862890	29858734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_66765.known	chr16	-	1532	7	FSM	ENSG00000103502.14	ENST00000569956.5	1532	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	178.438286873143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAATAAATACTCGTCT	3	True	NA	-41	True	NA	NA	NA	29863205	29858384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814_29862866_29863127
transcript_66766.known	chr16	+	729	6	FSM	ENSG00000214725.9	ENST00000565014.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.78885438199983	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGTTTCTCTGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	29863592	29868053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865355_29865443_29867863
transcript_66769.known	chr16	-	3843	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_13	69.7347421021643	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	7	True	NA	-11	True	AATAAA	-21	NA	29899550	29871158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_66770.known	chr16	-	3173	18	FSM	ENSG00000174938.15	ENST00000350527.7	3173	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	90.3937561000123	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	7725	False	NA	-11	True	AATAAA	-21	NA	29899090	29871158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29896912_29897852_29897985_29898940
transcript_66774.known	chr16	-	3801	17	FSM	ENSG00000174938.15	ENST00000308713.9	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	78.8510264676371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	10	True	NA	-11	True	AATAAA	-21	NA	29899547	29871158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_66778.known	chr16	-	3015	16	FSM	ENSG00000174938.15	ENST00000346932.9	3015	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	87.0510961064439	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	0	True	NA	-11	True	AATAAA	-21	NA	29899064	29871158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29896821_29897122_29897852_29897985_29898940
transcript_66797.known	chr16	-	1716	6	FSM	ENSG00000174943.11	ENST00000568000.6	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	13.905394636615	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTGGCTCCTGGGGA	-32	True	NA	-4	True	AATAAA	-15	NA	29926226	29906338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29907109_29910977_29911174_29911814_29911868_29911959_29912050_29923189_29923360_29925789
transcript_66804.known	chr16	+	775	4	FSM	ENSG00000174939.11	ENST00000563177.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	28.8905982400273	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTTGAAGGAAGGTGC	-2	True	NA	NA	False	GGGGCT	-33	NA	29900374	29905887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787
transcript_66807.known	chr16	+	1115	4	FSM	ENSG00000174939.11	ENST00000483405.5	1115	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.4630711207319	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	2	True	NA	10	True	TATAAA	-19	NA	29900378	29906056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29900742_29901551_29901921_29904851_29904966_29905787
transcript_66809.known	chr16	-	4172	2	FSM	ENSG00000174943.11	ENST00000561540.2	4172	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGGCATACTCCGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	29926236	29919634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29923360_29925789
transcript_66811.known	chr16	-	2878	3	FSM	ENSG00000174943.11	ENST00000567795.3	2878	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	56.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTACATGTCAATAAATT	-11	True	NA	NA	False	NA	NA	NA	29926205	29919669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29921962_29923189_29923360_29925789
transcript_66817.known	chr16	+	1013	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	423.442243208366	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	31	False	NA	14	True	AATAAA	-16	NA	29962110	29973048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
transcript_66819.nic	chr16	+	1007	6	NIC	ENSG00000149932.17	novel	946	6	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	285	junction_1	263.457321021831	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	29962014	29973048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_66822.known	chr16	+	946	6	FSM	ENSG00000149932.17	ENST00000279396.11	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	276.530938594581	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	-1	True	NA	14	True	AATAAA	-16	NA	29962078	29973048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_66825.nic	chr16	+	2378	5	NIC	ENSG00000149932.17	novel	1013	7	NA	NA	-64	0	intron_retention	FALSE	canonical	3	285	junction_1	288.509423589594	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	29962014	29973048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407
transcript_66827.known	chr16	+	1249	5	FSM	ENSG00000149932.17	ENST00000561899.6	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	304.19771531029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGGTTTTACTTAT	24	True	NA	-10	True	NA	NA	NA	29962103	29972005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407
transcript_66835.known	chr16	+	4246	19	FSM	ENSG00000149930.18	ENST00000279394.7	4246	19	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_17	26.9647689667851	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGACTCACCCTTCTG	379	False	NA	31	True	AATAAA	-21	NA	29974280	29992261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264_29986505_29989592_29989806_29990783_29990967_29991046
transcript_66838.known	chr16	+	4072	17	FSM	ENSG00000149930.18	ENST00000543033.5	4072	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	34.9336424525127	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCCTCCCCTAAGTTATT	280	False	NA	-94	True	NA	NA	NA	29974181	29988181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264_29986505_29986843
transcript_66843.known	chr16	+	4937	16	FSM	ENSG00000149930.18	ENST00000308893.9	4937	16	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	15.5283253729721	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTTTGGCCCAGGCT	2	True	NA	14	True	AATAAA	-15	NA	29973867	29988393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264
transcript_66862.known	chr16	-	1782	12	FSM	ENSG00000149927.18	ENST00000564944.5	1782	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	12.5573066544233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACCCAGAGCCACTC	1	True	NA	NA	False	AAAAAG	-7	NA	30011421	30005798	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010232_30010898_30010990_30011329
transcript_66891.known	chr16	+	1412	8	FSM	ENSG00000169592.15	ENST00000562441.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	106.813589290609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCTGTATTAAAGGAGT	10	True	NA	-2	True	TTTAAA	-35	NA	29996245	30005762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30004567_30004658_30005220
transcript_66893.nic	chr16	+	1788	8	NIC	ENSG00000169592.15	novel	1926	11	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	90.3749558952104	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGTGGCTCTGGGTTT	-21	True	NA	10	True	AATGAA	-12	NA	29995679	30005774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30004567_30004658_30005220
transcript_66899.known	chr16	+	883	7	FSM	ENSG00000169592.15	ENST00000567065.5	883	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	86.5885866227953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGATGCCCCCCCCCACG	10	True	NA	NA	False	GGGGCT	-35	NA	29996245	30005323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30005220
transcript_66900.known	chr16	+	1154	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	41.4192655120242	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	5	True	NA	27	True	ATTAAA	-15	NA	29996240	30005791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
transcript_66902.known	chr16	+	880	7	FSM	ENSG00000169592.15	ENST00000567705.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	87.96479725183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAACATGCACGGGTGTC	14	True	NA	NA	False	NA	NA	NA	29996249	30005577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001464_30001531_30005220
transcript_66905.known	chr16	-	2560	7	FSM	ENSG00000149929.16	ENST00000279392.8	2560	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	25.1490004219297	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTACTATTCAGTGGCCA	7	True	NA	-9	True	AATAAA	-20	NA	29995617	29992329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29993905_29994844_29995102_29995218_29995342_29995464_29995540
transcript_66908.known	chr16	+	515	6	FSM	ENSG00000169592.15	ENST00000620599.4	515	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	93.2450534881074	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAGAGCAAAGCCCAG	-26	True	NA	NA	False	GGGGCT	-40	NA	29996209	30001229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211
transcript_66909.known	chr16	+	1489	6	FSM	ENSG00000169592.15	ENST00000304516.11	1489	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	78.131683714099	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTTAAAAGGGCAGCT	14	True	NA	-47	True	NA	NA	NA	29995714	30005717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30005220
transcript_66912.known	chr16	-	988	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	47.9249413145181	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	-19	True	NA	-1	True	AATAAA	-27	NA	29995643	29992989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
transcript_66918.known	chr16	-	2313	5	FSM	ENSG00000149926.14	ENST00000380495.9	2325	5	12	0	12	0	multi-exon	FALSE	canonical	3	65	junction_4	4.15331193145904	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCCTTGCCACCAAG	5291	False	NA	-5	True	AATAAA	-22	NA	30031259	30024426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30025468_30025725_30025822_30026608_30026844_30029431_30029516_30030402
transcript_66924.known	chr16	-	2013	11	FSM	ENSG00000149927.18	ENST00000350119.9	2013	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	14.0074979921469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGACTCGTGTGTGCTGG	-25	True	NA	-5	True	AATAAA	-14	NA	30011027	30005513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902
transcript_66925.known	chr16	-	2065	12	FSM	ENSG00000149927.18	ENST00000616445.4	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.9451539310318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGACTCGTGTGTGCT	1	True	NA	-7	True	AATAAA	-12	NA	30011421	30005515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902_30010990_30011329
transcript_66928.known	chr16	+	2323	14	FSM	ENSG00000285043.3	ENST00000338110.11	2323	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	3406.02539887058	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-21	True	NA	22	True	AATAAA	-18	NA	30053150	30070414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30053218_30053463_30053500_30054783_30054928_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_66935.known	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	2977.48801658191	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-2	True	NA	22	True	AATAAA	-18	NA	30065759	30070414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_66936.known	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	2362.91697047844	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	27	False	NA	19	True	AATAAA	-15	NA	30064496	30070411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_66939.known	chr16	+	1447	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	0	0	0	0	multi-exon	TRUE	canonical	2	289	junction_5	2311.14753693917	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	15	False	NA	-12	True	NA	NA	NA	30065776	30070380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_66941.known	chr16	+	1499	8	FSM	ENSG00000149925.22	ENST00000569798.5	1499	8	0	0	0	0	multi-exon	FALSE	canonical	3	5055	junction_1	763.446962994891	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGCTAAGTCCATCAC	10	False	NA	-40	True	NA	NA	NA	30065771	30070352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829
transcript_66950.known	chr16	+	1550	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_1	1942.36762338518	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	62	False	NA	22	True	AATAAA	-18	NA	30064273	30070414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_66951.known	chr16	+	801	4	FSM	ENSG00000149925.22	ENST00000566130.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	6801	junction_2	265.870060158885	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	355	False	NA	22	True	AATAAA	-18	NA	30069261	30070414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30069390_30069498_30069674_30069829_30070030_30070116
transcript_66955.nic	chr16	+	1505	9	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_2	1016.76813359782	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTTGGGTTTGTGCC	5604	False	NA	5	True	AATAAA	-10	NA	30075944	30085371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30076095_30076314_30076476_30081199_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_66961.known	chr16	+	1402	9	FSM	ENSG00000149923.14	ENST00000279387.12	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	343.816970748973	7250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	-10	True	NA	10	True	AATAAA	-15	NA	30075993	30085376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_66967.known	chr16	+	1490	9	FSM	ENSG00000149923.14	ENST00000566749.5	1490	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	1055.44515934036	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTTGGGTTTGTGCC	13	True	NA	5	True	AATAAA	-10	NA	30076016	30085371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082964_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_66983.known	chr16	+	1447	8	FSM	ENSG00000149923.14	ENST00000563200.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	367.517540883619	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCTAATAAAAGAAG	3	True	NA	-19	True	GATAAA	-21	NA	30076006	30085347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083782_30084665_30084856_30084932
transcript_66989.known	chr16	+	941	8	FSM	ENSG00000149923.14	ENST00000562664.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	922.03740682894	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGACTACTTCCTGTG	14	True	NA	NA	False	NA	NA	NA	30076017	30085041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_66992.known	chr16	+	1301	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1035.68969428934	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	19	True	NA	-10	True	GATAAA	-30	NA	30076022	30085356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_67.known	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1678	junction_4	2400.71232918482	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
transcript_67002.known	chr16	+	742	7	FSM	ENSG00000149923.14	ENST00000562222.5	742	7	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	1219.8985841272	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTGGTGATGGAAGGT	28	True	NA	NA	False	NA	NA	NA	30076031	30084773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665
transcript_67006.known	chr16	+	846	7	FSM	ENSG00000149923.14	ENST00000563732.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1099.80250752376	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGGAAGGTTACAAG	-26	True	NA	NA	False	NA	NA	NA	30075977	30084779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665
transcript_67024.known	chr16	+	1122	4	FSM	ENSG00000149923.14	ENST00000564966.5	1122	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1312.33032765721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCAGCCCAGGGCTCC	3	True	NA	NA	False	NA	NA	NA	30076006	30083567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745
transcript_67026.known	chr16	+	658	3	FSM	ENSG00000149923.14	ENST00000567642.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	372.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATCAGGCCACTGCAC	25	True	NA	NA	False	NA	NA	NA	30076028	30081689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258
transcript_67027.known	chr16	+	1333	8	FSM	ENSG00000149923.14	ENST00000561610.1	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_4	174.856559289409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGATAAAAATTTTGAGAA	221	False	NA	-48	True	NA	NA	NA	30076224	30085318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_67029.known	chr16	-	1796	8	FSM	ENSG00000149922.12	ENST00000279386.6	1796	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	1.88441513689613	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGGCTCCTGTGTT	5012	False	NA	-3	True	AATAAA	-25	NA	30091249	30085795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075
transcript_67034.known	chr16	-	371	5	FSM	ENSG00000090238.12	ENST00000568674.1	371	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	125.473851857668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGTACAAAGAGGGGAAG	13	True	NA	NA	False	NA	NA	NA	30096208	30092777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095336_30096096
transcript_67035.known	chr16	-	796	5	FSM	ENSG00000090238.12	ENST00000566595.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	147.550838696363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGCTCTGGACCCTC	NA	False	NA	NA	False	NA	NA	NA	30096912	30092636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096615
transcript_67036.known	chr16	-	730	5	FSM	ENSG00000090238.12	ENST00000563788.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	147.117937383584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCATGCACTGTGA	NA	False	NA	NA	False	NA	NA	NA	30096915	30092576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096744
transcript_6704.known	chr1	+	2118	14	FSM	ENSG00000116478.12	ENST00000373548.8	2118	14	0	0	0	0	multi-exon	TRUE	canonical	3	1052	junction_6	72.876567446884	884	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	-7	True	NA	25	True	AATAAA	-17	NA	32292082	32333626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32329067_32329161_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_67040.known	chr16	+	1650	2	FSM	ENSG00000250616.3	ENST00000515455.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	NA	False	NA	30	True	AGTAAA	-18	NA	30096429	30104116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30097420_30103456
transcript_67043.known	chr16	-	1601	4	FSM	ENSG00000090238.12	ENST00000398841.6	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	3.85861230093008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGCTCGCGTGTAATC	8	True	NA	-35	True	AATAAA	-18	NA	30096213	30092313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251
transcript_67044.known	chr16	-	935	5	FSM	ENSG00000090238.12	ENST00000398838.8	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	71.8135606971274	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTTTGTACATAATAAAAC	17	False	30096261	-70	True	NA	NA	NA	30096244	30092348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096096
transcript_67046.known	chr16	-	1787	9	FSM	ENSG00000102882.12	ENST00000263025.9	1787	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	31.6336450634447	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	15	True	NA	-5	True	TATAAA	-24	NA	30123220	30114104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_67049.known	chr16	-	2567	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	33.3582899772168	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-1	True	NA	-6	True	TATAAA	-23	NA	30122968	30114105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
transcript_67050.nnic	chr16	+	1804	12	NNC	ENSG00000102879.16	novel	1622	12	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	25.5067646188676	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCCAGACTCTGATGAC	-7	True	NA	NA	False	AATAAA	-19	NA	30182813	30189075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_30183014_30183619_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_67051.known	chr16	+	1623	11	FSM	ENSG00000102879.16	ENST00000219150.10	1623	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	10.9178752511649	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAGACTCTGATGACT	-13	True	NA	NA	False	AATAAA	-20	NA	30183601	30189076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_67053.known	chr16	+	2809	10	FSM	ENSG00000102879.16	ENST00000568763.1	2809	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	11.4600756251141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCCAGACTCTGATGAC	-10	True	NA	NA	False	AATAAA	-19	NA	30183604	30189075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30183726_30185208_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_67084.known	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	78.0418516710419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	0	True	NA	7	True	AATAAA	-18	NA	30199254	30204310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_67086.known	chr16	+	1326	8	FSM	ENSG00000261052.6	ENST00000395138.6	1326	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.5294010690513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	605	False	NA	7	True	AATAAA	-18	NA	30199859	30204310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30199904_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_67092.known	chr16	+	1133	6	FSM	ENSG00000132207.18	ENST00000251303.11	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_2	122.025571090653	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	4	False	NA	NA	False	AATAAA	-14	NA	30193874	30197561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194273_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
transcript_67097.known	chr16	+	762	5	FSM	ENSG00000132207.18	ENST00000345535.8	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	399.835903840563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	11	False	NA	NA	False	AATAAA	-14	NA	30193903	30197561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194273_30194739_30194792_30196973_30197102_30197269_30197358_30197436
transcript_67100.known	chr16	-	335	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	1140.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	0	True	NA	NA	False	ATTAAA	-15	NA	30193666	30192933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193075_30193357_30193418_30193532
transcript_67101.known	chr16	-	1012	3	FSM	ENSG00000169627.9	ENST00000305321.4	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	122	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	62	False	NA	NA	False	ATTAAA	-14	NA	30194306	30192934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193075_30193357_30193456_30193532
transcript_67102.known	chr16	-	687	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	2651	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	-5	True	NA	NA	False	ATTAAA	-15	NA	30193697	30192933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193456_30193532
transcript_67103.known	chr16	+	1558	5	FSM	ENSG00000132207.18	ENST00000565081.1	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_1	129.159542814304	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTGAGTACAATAAAAAG	16	False	NA	NA	False	NA	NA	NA	30193886	30197531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
transcript_67104.known	chr16	+	2195	11	FSM	ENSG00000213599.10	ENST00000565342.5	2195	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	329.639196698451	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGATTTGTGTTCAT	521	False	NA	3	True	AATAAA	-14	NA	30194432	30204306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_67105.known	chr16	-	307	2	FSM	ENSG00000169627.9	ENST00000565525.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	844	False	NA	NA	False	ATTAAA	-14	NA	30193524	30192934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193075_30193357
transcript_67106.known	chr16	+	418	1	FSM	ENSG00000278887.2	ENST00000624024.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTTTCTTGTGCACTT	5731	False	NA	NA	False	AATAAA	-15	NA	30206509	30206927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30206500_30206900
transcript_67107.known	chr16	-	2362	13	FSM	ENSG00000183604.15	ENST00000411546.4	2374	13	7	5	-1	-5	multi-exon	TRUE	canonical	3	25	junction_8	187.527479467825	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACGTTTCTTCTTTTTC	55	False	NA	NA	False	AATAAA	-30	NA	30335374	30285022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30285458_30286166_30286269_30288560_30288786_30291202_30291376_30293098_30293197_30294114_30294188_30294565_30294692_30298376_30298591_30299868_30299928_30301221_30301359_30305054_30305211_30305789_30305954_30334974
transcript_67112.known	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_6	36.052816194516	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-34	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
transcript_67121.nic	chr16	-	3444	6	NIC	ENSG00000169217.9	novel	3361	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	472	junction_5	36.6900531479582	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-32	True	NA	-8	True	AATAAA	-17	NA	30355306	30350772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
transcript_67132.known	chr16	-	3580	9	FSM	ENSG00000169221.14	ENST00000409939.8	3580	9	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	23.2150274606773	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	-32	True	NA	-2	True	NA	NA	NA	30370494	30357101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30358574_30358662_30358818_30359171_30359362_30359537_30359604_30359726_30359842_30364899_30365007_30365104_30365213_30365494_30365595_30369227
transcript_67134.nic	chr16	-	3163	8	NIC	ENSG00000169221.14	novel	3580	9	NA	NA	227	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	51.7229669114451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	18	True	NA	-2	True	NA	NA	NA	30370267	30357101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30358574_30358662_30358818_30359537_30359604_30359726_30359842_30364899_30365007_30365104_30365213_30365494_30365595_30369227
transcript_67136.known	chr16	+	992	2	FSM	ENSG00000260219.3	ENST00000563252.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACAACAGCAGGTTCTTT	774	False	NA	NA	False	AAAACA	-7	NA	30355440	30357104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30355621_30356292
transcript_67144.known	chr16	+	3032	3	FSM	ENSG00000180035.13	ENST00000613509.2	3032	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	74	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	-30	True	NA	27	True	AATAAA	-18	NA	30395419	30400108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30395579_30395779_30395874_30397329
transcript_67145.known	chr16	+	3234	2	FSM	ENSG00000180035.13	ENST00000320159.2	3234	2	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	-31	True	NA	27	True	AATAAA	-18	NA	30395418	30400108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30395874_30397329
transcript_67148.known	chr16	+	2069	3	FSM	ENSG00000179965.12	ENST00000319296.10	2069	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	4.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGGCTGGGCAT	-9	True	NA	NA	False	ATTAAA	-5	NA	30407605	30419414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30407665_30408044_30408195_30417554
transcript_67150.known	chr16	-	878	3	FSM	ENSG00000179958.10	ENST00000568973.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCAGGGGTGCCTCTGA	210	False	NA	48	True	NA	NA	NA	30429800	30423978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30424534_30429056_30429168_30429588
transcript_67151.known	chr16	-	1024	3	FSM	ENSG00000179958.10	ENST00000678016.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	186	False	NA	-17	True	AATAAA	-20	NA	30429824	30423697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30424534_30429056_30429168_30429747
transcript_67152.known	chr16	-	1181	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_2	13	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGTTATTACCTGTTT	-20	True	NA	-3	True	AGTAAA	-22	NA	30430030	30423614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30424534_30429056_30429168_30429879
transcript_67154.known	chr16	-	749	3	FSM	ENSG00000179958.10	ENST00000565758.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	569	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTATTCCTGGATGGC	18	True	NA	-7	True	AGTAAA	-21	NA	30429992	30424033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30424534_30429056_30429168_30429854
transcript_67155.known	chr16	-	2244	1	FSM	ENSG00000179918.19	ENST00000478753.5	2244	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTAATGTTTGGTGG	-1	True	NA	-1	True	AATAAA	-26	NA	30445874	30443630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30443600_30445900
transcript_67156.known	chr16	-	1511	3	FSM	ENSG00000169955.8	ENST00000568028.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	10.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTTTGCTGAGGCAG	6169	False	NA	NA	False	NA	NA	NA	30535004	30532305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30533149_30534196_30534311_30534450
transcript_67161.known	chr16	+	1153	2	FSM	ENSG00000235560.4	ENST00000664247.1	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTTCCACTTCATTG	-15	True	NA	NA	False	GATAAA	-21	NA	30535048	30537149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30535481_30536428
transcript_67162.known	chr16	-	2289	2	FSM	ENSG00000169957.10	ENST00000380412.7	2289	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACTTGTCCTTAAAATG	-3	True	NA	-20	True	AATAAA	-17	NA	30526566	30524003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30526052_30526325
transcript_67163.known	chr16	-	1999	2	FSM	ENSG00000169957.10	ENST00000562803.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGGTGGGGAGTG	8144	False	NA	NA	False	NA	NA	NA	30526821	30524132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30526052_30526741
transcript_67164.known	chr16	-	3504	2	FSM	ENSG00000169955.8	ENST00000395094.3	3504	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCTGAGAGCTTTGA	6255	False	30534965	-8	True	ATTAAA	-21	NA	30534918	30530366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30533149_30534196
transcript_67168.known	chr16	-	2846	3	FSM	ENSG00000169951.10	ENST00000395091.3	2846	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	4	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGCTTGTATTGCAT	4	True	NA	-32	True	AGTAAA	-17	NA	30558374	30553763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30556108_30557732_30557847_30557986
transcript_67176.known	chr16	-	949	2	FSM	ENSG00000169951.10	ENST00000568333.1	949	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGACTGTGGCCGCCGCTT	291	False	NA	NA	False	NA	NA	NA	30558211	30555637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30556108_30557732
transcript_67191.nnic	chr16	-	2171	4	NNC	ENSG00000197162.10	novel	3208	3	NA	NA	-42	-207	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.04155872120988	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCATAGTCTTTCCAG	NA	False	NA	-13	True	AATAAA	-23	NA	30585811	30580862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_30581567_30582510_30583444_30585121_30585251_30585406
transcript_67193.known	chr16	-	427	3	FSM	ENSG00000229809.9	ENST00000566632.5	427	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGCCAGCGGCGCC	1077	False	NA	NA	False	NA	NA	NA	30571320	30570219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30570437_30571009_30571124_30571224
transcript_67194.known	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	5	True	NA	-11	True	AATAGA	-17	NA	30571714	30569725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30570437_30571009_30571124_30571433
transcript_67196.known	chr16	-	3208	3	FSM	ENSG00000197162.10	ENST00000395216.3	3208	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCAGGCACGTTGGCTCA	16	True	NA	NA	False	ACTAAA	-24	NA	30585697	30580655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30583444_30585121_30585251_30585406
transcript_67200.known	chr16	+	1488	2	FSM	ENSG00000239791.2	ENST00000492040.1	1488	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCGTGGTGGCCCAT	12	False	NA	NA	False	AATAAA	-13	NA	30572254	30583860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30572412_30582529
transcript_67201.known	chr16	-	1414	2	FSM	ENSG00000229809.9	ENST00000563665.3	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGAGTGA	725	False	NA	29	True	NA	NA	NA	30571672	30569685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30570437_30571009
transcript_67202.known	chr16	-	540	3	FSM	ENSG00000229809.9	ENST00000567855.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATAATAGCCCCTG	745	False	NA	NA	False	AATAAA	-29	NA	30571652	30570733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30570941_30571009_30571124_30571433
transcript_67205.known	chr16	-	3557	3	FSM	ENSG00000156853.13	ENST00000287461.8	3557	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTCCTTGTGGAATTA	-20	True	NA	NA	False	ATTAAA	-17	NA	30610389	30602557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30605448_30609524_30609639_30609836
transcript_67206.known	chr16	-	1207	3	FSM	ENSG00000156853.13	ENST00000563304.5	1207	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTACCCCTCACTGCT	-17	True	NA	NA	False	NA	NA	NA	30610386	30604539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30605448_30609524_30609639_30610201
transcript_67211.nic	chr16	+	2020	12	NIC	ENSG00000156858.12	novel	2316	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	22.4915043648717	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTGTATCTCTAGCT	-9	True	NA	27	True	AGTAAA	-19	NA	30650695	30656412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30650807_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_67212.known	chr16	+	2078	12	FSM	ENSG00000156858.12	ENST00000300835.9	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	15.9570705072565	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	-22	True	NA	28	True	AGTAAA	-20	NA	30650959	30656413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_67221.known	chr16	+	2124	11	FSM	ENSG00000156858.12	ENST00000287463.8	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	16.7320052593824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	3	True	NA	28	True	AGTAAA	-20	NA	30650984	30656413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_67223.known	chr16	+	2316	11	FSM	ENSG00000156858.12	ENST00000542965.2	2316	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	8.24681756800767	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	137	False	NA	28	True	AGTAAA	-20	NA	30651189	30656413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_67251.known	chr16	+	5309	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.1539305399106	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	-1	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_67253.nnic	chr16	+	3857	20	NIC	ENSG00000103549.22	novel	5309	20	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	2	16	junction_19	52.2033101974182	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCCCGATTTTAGC	0	True	NA	40	True	NA	NA	NA	30762308	30775218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30774313
transcript_67259.nic	chr16	+	4272	20	NIC	ENSG00000103549.22	novel	5309	20	NA	NA	16	0	intron_retention	FALSE	canonical	3	29	junction_1	48.6880510576206	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTAGTCCCCCGATTTT	-4	True	NA	37	True	NA	NA	NA	30762304	30775215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30762399_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_6731.known	chr1	-	1546	2	FSM	ENSG00000175130.7	ENST00000329421.8	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	16072	junction_1	0	11896	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-1	True	NA	-12	True	AATAAA	-14	NA	32336233	32333838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32335098_32335946
transcript_67312.known	chr16	+	1536	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	72.1202699199978	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	25	True	NA	-12	True	NA	NA	NA	30748439	30757331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
transcript_67326.known	chr16	+	1791	9	FSM	ENSG00000156873.16	ENST00000563913.5	1791	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	27.7297223210042	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAATCTGCTACAC	28	True	NA	-9	True	NA	NA	NA	30748442	30757334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_67343.known	chr16	+	1618	7	FSM	ENSG00000156873.16	ENST00000564838.5	1618	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	93.555687516402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCCTGTGTCTGTCT	-13	True	NA	22	True	AATAAA	-23	NA	30748401	30757365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756589_30756716_30756803
transcript_6735.known	chr1	-	699	3	FSM	ENSG00000225828.2	ENST00000432622.2	941	3	242	0	242	0	multi-exon	FALSE	canonical	3	8	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGGGCTGGCAGTGTATG	NA	False	NA	-7	True	AATAAA	-25	NA	32362243	32361269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32361536_32361729_32361877_32361957
transcript_6736.known	chr1	-	2759	2	FSM	ENSG00000225828.2	ENST00000416512.1	2759	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCGGGCTGGCAGTGTAT	NA	False	NA	-8	True	AATAAA	-24	NA	32364223	32361270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32361536_32361729
transcript_67361.known	chr16	-	1046	4	FSM	ENSG00000196118.12	ENST00000545825.1	1046	4	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_3	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGCTTTAGAATGTTTA	11	True	NA	-19	True	AATATA	-28	NA	30762078	30760036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30760454_30760605_30760669_30761197_30761230_30761544
transcript_67362.known	chr16	-	6083	3	FSM	ENSG00000102870.6	ENST00000262525.6	6083	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-13	True	NA	-7	True	AATAAA	-15	NA	30787205	30778455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30784255_30784409_30784516_30787027
transcript_67365.nic	chr16	-	6243	2	NIC	ENSG00000102870.6	novel	6083	3	NA	NA	-14	-9	intron_retention	FALSE	canonical	3	42	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGATTTCCTGGGTGTTTC	NA	False	NA	-16	True	AATAAA	-6	NA	30787219	30778464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30784516_30787027
transcript_67372.nnic	chr16	-	877	7	NNC	ENSG00000099385.12	novel	857	6	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	393.535858877209	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	-6	True	NA	-2	True	AATAAA	-14	NA	30894054	30887794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_30887991_30888859_30888946_30889234_30889278_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_67374.known	chr16	-	2409	6	FSM	ENSG00000099385.12	ENST00000380317.8	2409	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	335.628008366406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGCTCCTGTGTAGAGC	2767	False	NA	NA	False	NA	NA	NA	30894302	30833625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30835149_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_67376.known	chr16	-	1603	6	FSM	ENSG00000099385.12	ENST00000572628.5	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	331.652468707833	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAACGAATTGGGCTAT	3127	False	NA	NA	False	NA	NA	NA	30893942	30851245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30852323_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_67380.known	chr16	-	857	6	FSM	ENSG00000099385.12	ENST00000215115.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	47.50999894759	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	-29	True	NA	-2	True	AATAAA	-14	NA	30894077	30887794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_67384.known	chr16	+	1375	2	FSM	ENSG00000260083.3	ENST00000663816.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAATGAGTGTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	30875407	30895211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30876119_30894547
transcript_67385.known	chr16	+	925	1	FSM	ENSG00000260083.3	ENST00000658747.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	5399	False	NA	16	True	AATAAA	-22	NA	30894295	30895220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30894300_30895200
transcript_67389.nic	chr16	+	4355	11	NIC	ENSG00000099364.18	novel	4490	11	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_2	5.65331761004103	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTTCGTGTGTGT	-13	True	NA	42	True	TATAAA	-22	NA	30923577	30948783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30924460_30925730_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928500_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_6739.known	chr1	-	2925	12	FSM	ENSG00000160058.19	ENST00000444377.5	2925	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	104.312705342483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGAAAGGTGTCTGGG	6	True	NA	-14	True	ATTAAA	-12	NA	32394428	32365112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32366655_32368446_32368551_32369229_32369339_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_67391.known	chr16	+	4490	11	FSM	ENSG00000099364.18	ENST00000338343.10	4490	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	6.4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTTCGTGTGTGT	-19	True	NA	42	True	TATAAA	-22	NA	30923571	30948783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30924460_30925730_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928629_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_67393.known	chr16	+	3796	11	FSM	ENSG00000099364.18	ENST00000562319.7	3796	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.67398201717987	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTTCGTGTGTGT	715	False	NA	42	True	TATAAA	-22	NA	30924574	30948783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30924769_30925730_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928629_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_67402.known	chr16	+	2204	2	FSM	ENSG00000175938.7	ENST00000318663.5	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGTTGCTGTGAAGG	-23	True	NA	7	True	AATAAA	-15	NA	30949067	30954938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30949518_30953184
transcript_67403.known	chr16	+	628	2	FSM	ENSG00000175938.7	ENST00000562699.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCTTCCACCTTTTC	61	False	NA	NA	False	NA	NA	NA	30949151	30956461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30949518_30956199
transcript_67404.known	chr16	-	3951	1	FSM	ENSG00000260852.1	ENST00000563777.1	3951	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-4	True	NA	NA	False	NA	NA	NA	30923269	30919318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30919300_30923300
transcript_67405.known	chr16	+	3641	11	FSM	ENSG00000099364.18	ENST00000471231.6	3641	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.93032155716274	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCTGCGGAGTTCG	NA	False	NA	35	True	TATAAA	-15	NA	30923070	30948776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30923153_30925768_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928631_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_67406.known	chr16	+	3312	10	FSM	ENSG00000099364.18	ENST00000427128.5	3312	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5.80761526460977	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTTCGTGTGTGT	1187	False	NA	42	True	TATAAA	-22	NA	30925891	30948783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928500_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_67407.known	chr16	+	5991	19	FSM	ENSG00000099381.19	ENST00000262519.14	5991	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	8.33036984343403	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCGGTGTATTTG	5	True	NA	16	True	ATTAAA	-16	NA	30957753	30984664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30957965_30958716_30958882_30959090_30959187_30961266_30961538_30963432_30963555_30964093_30964324_30964611_30965462_30965600_30966387_30966883_30967061_30967500_30967589_30969304_30969463_30969601_30969690_30971377_30971720_30979144_30980195_30980484_30980658_30980738_30980850_30981060_30981181_30983634_30983773_30983849
transcript_6741.known	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_10	33.6881284728018	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-7	True	NA	NA	False	NA	NA	NA	32394441	32364632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_67410.known	chr16	+	2171	7	FSM	ENSG00000099377.14	ENST00000297679.10	2171	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.57436097443867	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	-3	True	NA	23	True	ATTAAA	-15	NA	30985206	30989147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30985298_30985652_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_67411.nic	chr16	+	2342	7	NIC	ENSG00000099377.14	novel	2171	7	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	13.9602610609146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	112	False	NA	23	True	ATTAAA	-15	NA	30985158	30989147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30985298_30985652_30985948_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_67412.nnic	chr16	+	2366	7	NNC	ENSG00000099377.14	novel	2171	7	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.5114897006935	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	134	False	NA	23	True	ATTAAA	-15	NA	30985180	30989147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_30985298_30985483_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_67416.nnic	chr16	+	2063	6	NIC	ENSG00000099377.14	novel	2171	7	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	15.2708873350569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	112	False	NA	23	True	ATTAAA	-15	NA	30985158	30989147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30985298_30985652_30985825_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_67418.nnic	chr16	+	2025	6	NIC	ENSG00000099377.14	novel	2171	7	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	15.4583310871517	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	134	False	NA	23	True	ATTAAA	-15	NA	30985180	30989147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30985298_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_6742.known	chr1	-	1505	11	FSM	ENSG00000160058.19	ENST00000446293.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	76.2816491693776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTCTTGGGCCTCTGCT	4	True	NA	NA	False	NA	NA	NA	32394430	32366476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_67424.known	chr16	-	4674	10	FSM	ENSG00000099365.11	ENST00000215095.11	4674	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.73755680118397	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCGTGTGCTCACTTCC	23	True	NA	-1	True	NA	NA	NA	31010638	30989255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30992902_30993129_30993241_30993346_30993485_30996682_30996757_30996950_30997060_30997501_30997576_31000927_31001003_31001093_31001194_31001528_31001604_31010366
transcript_67427.nic	chr16	+	1546	11	NIC	ENSG00000103496.15	novel	1498	12	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	61.2277714766755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCCTGTGCACGTGT	348	False	NA	8	True	ATTAAA	-18	NA	31033442	31040163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_67428.known	chr16	+	1410	11	FSM	ENSG00000103496.15	ENST00000313843.8	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	16.9422548676379	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	-5	True	NA	9	True	ATTAAA	-19	NA	31033557	31040164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_67438.known	chr16	+	846	4	FSM	ENSG00000103496.15	ENST00000565483.1	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	97.3801257387199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTACTTTCTCCT	43	True	NA	-18	True	NA	NA	NA	31033605	31034853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461
transcript_67439.known	chr16	+	649	4	FSM	ENSG00000103496.15	ENST00000613541.1	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	26.4701089281224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	16	False	NA	6	True	AATAAA	-18	NA	31033804	31034877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461
transcript_67443.known	chr16	-	2865	3	FSM	ENSG00000167394.13	ENST00000538906.5	2865	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	43	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCATCTTCTGTGTTCTG	722	False	NA	-6	True	ATTAAA	-18	NA	31073502	31060847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31062281_31063812_31064482_31072739
transcript_67444.known	chr16	-	2685	3	FSM	ENSG00000167394.13	ENST00000300849.5	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	4.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTCTGTGTTCTGG	-16	True	NA	-5	True	ATTAAA	-19	NA	31074240	31060846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31062281_31063812_31064482_31073658
transcript_67457.known	chr16	+	6892	3	FSM	ENSG00000167395.10	ENST00000300850.5	6892	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCAGTCCTCATAGGCA	-6	True	NA	NA	False	NA	NA	NA	31074421	31084196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31074632_31076245_31081702_31082970
transcript_67461.known	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_2	41.5	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-32	True	NA	-13	True	AATAAA	-18	NA	31094797	31090853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31091343_31093311_31093422_31094556
transcript_67462.known	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	391	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	5	True	NA	-1	True	AATAAA	-30	NA	31094760	31090841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31091343_31093311_31093483_31094556
transcript_67463.known	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-14	True	NA	-1	True	AATAAA	-30	NA	31094956	31090841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31091343_31094556
transcript_67466.known	chr16	+	2036	12	FSM	ENSG00000103507.14	ENST00000219794.11	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_11	63.5270489666663	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCCGGGTCCCAG	-25	True	NA	15	True	NA	NA	NA	31108385	31112791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112120
transcript_67475.known	chr16	+	1997	11	FSM	ENSG00000103507.14	ENST00000394950.7	1997	11	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	31.736571963588	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGGCCCCGTGTGTGGG	NA	False	NA	28	True	ATTAAA	-20	NA	31108293	31112567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868
transcript_67487.known	chr16	+	1495	11	FSM	ENSG00000103510.20	ENST00000219797.9	1495	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	18.1383571472171	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGACTTTGGAGGGGA	-6	True	NA	41	True	AATAAA	-14	NA	31117663	31131359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745_31130901_31131194
transcript_67490.known	chr16	+	1789	10	FSM	ENSG00000103510.20	ENST00000448516.6	1789	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	18.9606480068458	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGACTTTGGAGGGGA	-6	True	NA	41	True	AATAAA	-14	NA	31117663	31131359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745
transcript_67492.nic	chr16	+	1703	10	NIC	ENSG00000103510.20	novel	1846	12	NA	NA	-35	0	intron_retention	FALSE	canonical	3	86	junction_7	19.0386222138701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGATGTTCTTCATTTCAC	8502	False	NA	75	True	NA	NA	NA	31117628	31131393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130901_31131194
transcript_67494.nic	chr16	+	1997	9	ISM	ENSG00000103510.20	ENST00000219797.9	1495	11	-35	-34	-35	0	intron_retention	FALSE	canonical	3	86	junction_7	20.0483789868408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGATGTTCTTCATTTCAC	8502	False	NA	75	True	NA	NA	NA	31117628	31131393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455
transcript_675.known	chr1	-	1933	7	FSM	ENSG00000078808.19	ENST00000360001.12	1933	7	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_3	43.8231927433662	8996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTTTTGGTCAGCT	-12	True	NA	-24	True	AATATA	-1	NA	1232001	1216930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1217689_1218457_1218634_1218768_1218928_1223243_1223358_1223831_1223969_1228467_1228947_1231891
transcript_67506.known	chr16	-	1214	6	FSM	ENSG00000052344.16	ENST00000568261.5	1214	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	263.390964157847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGCTGGGGCCCCATCT	-9	True	NA	NA	False	NA	NA	NA	31135727	31131893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31132336_31132428_31132596_31132681_31132881_31133314_31133389_31135153_31135172_31135413
transcript_67508.known	chr16	-	1837	6	FSM	ENSG00000052344.16	ENST00000317508.11	1837	6	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_1	28.3083026690051	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	-9	True	NA	-17	True	ATTAAA	-15	NA	31135727	31131432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135153_31135172_31135413
transcript_67544.known	chr16	+	1785	15	FSM	ENSG00000089280.19	ENST00000568685.1	1785	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	640.780773744032	1928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCATTAAAAGTGACCAT	12	False	NA	1	True	NA	NA	NA	31180150	31191575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189119_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_6755.known	chr1	-	1630	10	FSM	ENSG00000160058.19	ENST00000373520.8	1630	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	86.7424170379189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	6	True	NA	NA	False	AATATA	-39	NA	32394428	32368032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383940_32386778_32386896_32394079_32394141_32394403
transcript_6756.nic	chr1	-	1719	10	ISM	ENSG00000160058.19	ENST00000455895.7	3309	11	-18	3400	-18	0	5prime_fragment	FALSE	canonical	3	192	junction_9	34.9362735545241	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	NA	False	NA	NA	False	AATATA	-39	NA	32394459	32368032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_67561.known	chr16	+	1787	14	FSM	ENSG00000089280.19	ENST00000566605.5	1787	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	665.017942543903	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	-1	True	NA	28	True	ATTAAA	-17	NA	31180137	31191602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_6757.known	chr1	-	4599	10	FSM	ENSG00000160058.19	ENST00000341071.11	4599	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	80.4051469392413	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCCTGAACCTTT	8	True	NA	-12	True	ATTAAA	-15	NA	32394426	32365170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_67570.known	chr16	+	4920	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_3	443.552225097439	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	11	False	NA	28	True	ATTAAA	-17	NA	31180149	31191602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_67600.known	chr16	+	952	3	FSM	ENSG00000089280.19	ENST00000487045.6	952	3	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	39	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGACTCTTCTTA	0	True	NA	NA	False	NA	NA	NA	31180138	31183350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512
transcript_67603.known	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	5.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-9	True	NA	-13	True	AATATA	-18	NA	31202760	31201485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31201842_31202146_31202204_31202416
transcript_67604.known	chr16	+	1095	2	FSM	ENSG00000261359.2	ENST00000561916.2	1095	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTTGTTTGAATCCT	28	False	NA	17	True	ATTAAA	-22	NA	31201884	31203452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31201987_31202459
transcript_67605.known	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-5	True	NA	-13	True	AATATA	-18	NA	31202756	31201485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31201842_31202416
transcript_67611.nic	chr16	+	1991	2	ISM	ENSG00000177238.14	ENST00000613872.1	1573	7	-72	9984	-72	-9984	5prime_fragment	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAAAAAAACCCAACC	-1	True	NA	NA	False	AATAAA	-35	NA	31214018	31216443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_31214298_31214731
transcript_67612.known	chr16	-	589	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGCGCGCACACGT	-1	False	NA	-4	True	AATAAA	-19	NA	31217135	31215961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31216158_31216742
transcript_67613.known	chr16	-	372	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGGCTCTGTGGGGAG	-14	True	NA	1	True	AATAAA	-16	NA	31428360	31427730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31427858_31428014_31428152_31428252
transcript_67614.known	chr16	+	3626	8	FSM	ENSG00000140691.18	ENST00000408912.7	3626	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2662682736217	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGGCCTGGC	NA	False	NA	-56	True	NA	NA	NA	31458079	31467105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31458502_31458853_31458977_31459467_31460000_31461921_31462030_31462130_31462918_31464393_31464888_31465849_31465983_31466078
transcript_67619.known	chr16	-	3026	1	FSM	ENSG00000260267.1	ENST00000564629.1	3026	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTGTGTATGTGAGA	NA	False	NA	NA	False	NA	NA	NA	31459736	31456710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31456700_31459700
transcript_67620.known	chr16	+	3108	6	FSM	ENSG00000140691.18	ENST00000268314.9	3108	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	13.3056379027839	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTGTGGTGTG	0	True	NA	4	True	ATTAAA	-16	NA	31459500	31467165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31460000_31461921_31462030_31462130_31462918_31464393_31464888_31465849_31465983_31466078
transcript_67621.known	chr16	+	2072	7	FSM	ENSG00000140691.18	ENST00000564900.1	2072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.7594569803541	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTGTGGTGTG	-5	True	NA	4	True	ATTAAA	-16	NA	31459960	31467165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31460000_31461921_31462030_31462130_31462196_31462771_31462918_31464393_31464888_31465849_31465983_31466078
transcript_67623.known	chr16	+	1805	11	FSM	ENSG00000140682.19	ENST00000394863.8	1805	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.40337760755184	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	-7	True	NA	6	True	CATAAA	-18	NA	31472151	31477958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_67626.nic	chr16	+	1330	7	ISM	ENSG00000140682.19	ENST00000569703.5	1005	8	-36	965	-2	564	5prime_fragment	FALSE	canonical	3	12	junction_1	7.86694914747063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTGGTGTAAAGATG	-20	True	NA	4	True	AATAAA	-13	NA	31472138	31475323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562
transcript_67627.known	chr16	+	1770	10	FSM	ENSG00000140682.19	ENST00000567607.5	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	5.97112393001973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	248	False	NA	6	True	CATAAA	-18	NA	31473425	31477958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_67631.known	chr16	-	2785	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	13.3624681685516	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTGCAGCTGGACCC	-2	True	NA	-10	True	AATAAA	-31	NA	31508391	31489474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_67642.nic	chr16	-	3303	11	NIC	ENSG00000140688.17	novel	2785	13	NA	NA	-41	0	intron_retention	FALSE	canonical	3	141	junction_8	13.1259285385835	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTTGCTCGGCAAT	NA	False	NA	-29	True	AATAAA	-12	NA	31508432	31489493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_67666.known	chr16	+	660	4	FSM	ENSG00000140675.13	ENST00000568891.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	2.94392028877595	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCTGGTTTTGTGGA	3541	False	NA	NA	False	NA	NA	NA	31488209	31490344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31488491_31489122_31489339_31490103_31490231_31490308
transcript_67669.known	chr16	+	655	2	FSM	ENSG00000260625.3	ENST00000569782.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGATCCCCACAGTTT	-11	True	NA	NA	False	AATAAA	-25	NA	31508470	31509256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31509037_31509167
transcript_6767.known	chr1	+	12831	4	FSM	ENSG00000273274.2	ENST00000609129.2	12831	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.1993265821489	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTCTCCTTTCAGTT	7	True	NA	10	True	AATAAA	-20	NA	32465071	32496686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32465106_32470583_32471616_32480890_32481070_32485100
transcript_67670.known	chr16	+	1812	9	FSM	ENSG00000131797.13	ENST00000254109.10	1844	9	32	0	4	0	multi-exon	TRUE	canonical	1	2	junction_1	6.63207169744115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	-11	True	NA	NA	False	NA	NA	NA	31700589	31707437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31700739_31701662_31701859_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_67671.known	chr16	+	1571	8	FSM	ENSG00000131797.13	ENST00000693004.1	1643	8	72	0	5	0	multi-exon	FALSE	canonical	2	5	junction_1	5.71785602748272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	34	True	NA	NA	False	NA	NA	NA	31700634	31707437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31700739_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_67673.known	chr16	+	1449	7	FSM	ENSG00000131797.13	ENST00000686087.1	1777	7	36	292	1	-15	multi-exon	FALSE	canonical	2	5	junction_1	5.5502752684489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	-6	True	NA	NA	False	NA	NA	NA	31700594	31707422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31700739_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_67680.known	chr16	+	2769	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-10	0	2	0	multi-exon	FALSE	canonical	3	74	junction_4	17.4839211849059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	-30	True	NA	5	True	AATAAA	-14	NA	31713233	31761565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
transcript_67682.known	chr16	+	1670	5	FSM	ENSG00000197302.11	ENST00000531864.6	1670	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	9.63068014212911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTATAATTAACTTTCA	-17	True	NA	NA	False	TTTAAA	-11	NA	31713246	31794869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31713436_31753765_31753901_31792629_31792731_31793334_31793412_31793701
transcript_67683.known	chr16	+	481	3	FSM	ENSG00000197302.11	ENST00000542684.5	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	24	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAATTAAATGGG	23	True	NA	NA	False	NA	NA	NA	31713286	31759553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31713436_31753765_31753901_31759356
transcript_67684.known	chr16	+	518	5	FSM	ENSG00000197302.11	ENST00000529515.2	5982	5	62	5402	3	-52	multi-exon	FALSE	canonical	3	39	junction_4	29.5338788512447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGCCAAGGCATAAGC	2	True	NA	NA	False	AATAAA	-11	NA	31713305	31754484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31754454
transcript_67685.known	chr16	+	680	5	FSM	ENSG00000185947.15	ENST00000394846.7	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	33.0189339621981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAACTTTGATCAATATA	-2	True	NA	NA	False	NA	NA	NA	31873806	31914725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31890206_31890251_31914475
transcript_67686.known	chr16	+	3268	4	FSM	ENSG00000185947.15	ENST00000300870.15	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	27.7408643620842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAATTACTTCAATT	-2	True	NA	77	True	ATTAAA	-20	NA	31873806	31917357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475
transcript_67687.known	chr16	-	5177	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_8	16.2685791225499	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGTAATATATCAATGC	-29	True	NA	72	True	AATATA	-17	NA	46621379	46578590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_67693.nnic	chr16	-	1714	12	NNC	ENSG00000171241.9	novel	5177	13	NA	NA	-15	-1623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.2214470473785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGAAGATGGAACTGAAG	-44	True	NA	NA	False	AAGAAA	-2	NA	46621394	46583535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604221_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_67694.known	chr16	-	530	2	FSM	ENSG00000171241.9	ENST00000564272.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATGGCATCGCTTAT	-1	True	NA	NA	False	AATAAA	-27	NA	46621351	46620465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46620901_46621256
transcript_67696.known	chr16	-	5054	18	FSM	ENSG00000069329.18	ENST00000647959.1	5054	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	212.086291767548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGCATTTAAAACCC	-13	True	NA	-99	True	AATAGA	-12	NA	46689194	46658076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46682477_46682685_46683507_46683607_46689130
transcript_67697.known	chr16	-	4017	17	FSM	ENSG00000069329.18	ENST00000568784.6	4017	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	165.800602664013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGCTTTTTTTCCCC	34	False	NA	-7	True	AATAAA	-15	NA	46689147	46659676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46688313
transcript_67698.known	chr16	-	6776	17	FSM	ENSG00000069329.18	ENST00000299138.12	6776	17	0	0	0	0	multi-exon	TRUE	canonical	3	528	junction_3	61.7636624561724	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGGAGAAAGAAAAAAA	3	True	NA	NA	False	NA	NA	NA	46689178	46656131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46689130
transcript_67706.nic	chr16	-	2703	16	NIC	ENSG00000069329.18	novel	5054	18	NA	NA	-41	-508	combination_of_known_junctions	FALSE	canonical	3	33	junction_14	161.048729685562	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAAGCACTTATCTTGG	NA	False	NA	54	True	TTTAAA	-44	NA	46689235	46660184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681521_46683507_46683607_46689130
transcript_67719.known	chr16	+	1615	7	FSM	ENSG00000091651.9	ENST00000219097.7	1615	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	35.3761532988286	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	-12	True	NA	27	True	AATAAA	-18	NA	46689658	46698394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_67720.nic	chr16	+	1723	7	NIC	ENSG00000091651.9	novel	1615	7	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	172.922349304215	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	NA	False	NA	27	True	AATAAA	-18	NA	46689609	46698394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_46689830_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_67722.nic	chr16	+	656	6	ISM	ENSG00000091651.9	ENST00000219097.7	1615	7	-16	2347	0	-172	5prime_fragment	FALSE	canonical	3	409	junction_1	37.9346807024917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAAGAAGATAGTGG	-28	True	NA	NA	False	NA	NA	NA	46689642	46696047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016
transcript_67725.known	chr16	+	1833	4	FSM	ENSG00000091651.9	ENST00000569239.5	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	34.7786652353933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGGCCGGGCGGGGGG	-12	True	NA	NA	False	GGGGCT	-29	NA	46689658	46694519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092
transcript_67726.known	chr16	-	6845	4	FSM	ENSG00000155330.10	ENST00000285697.9	6845	4	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_1	43.0426145426444	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATACTTACCAT	-17	True	NA	NA	False	AGTAAA	-18	NA	46831180	46796602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46803071_46809602_46809786_46824385_46824483_46831083
transcript_67727.known	chr16	-	6640	3	FSM	ENSG00000155330.10	ENST00000394806.6	6640	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	133.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTATCATGTATACTTA	1	True	NA	NA	False	AGTAAA	-14	NA	46831162	46796606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46803071_46824385_46824483_46831083
transcript_67753.known	chr16	+	3992	12	FSM	ENSG00000166123.14	ENST00000340124.9	3992	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	254.22122207256	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTTTAACTTTCATTGT	-13	True	NA	28	True	AATAAA	-17	NA	46884361	46931289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_46884468_46884693_46884959_46897647_46897738_46900681_46900791_46906841_46906976_46909683_46909928_46916627_46916708_46918620_46918758_46922241_46922417_46924388_46924545_46926924_46927038_46928906
transcript_6776.known	chr1	-	1567	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_3	211.074565550239	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-8	True	NA	-3	True	AATAAA	-19	NA	32650550	32620819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_67771.nic	chr16	+	1484	6	ISM	ENSG00000166123.14	ENST00000340124.9	3992	12	-55	20881	-55	534	5prime_fragment	FALSE	canonical	0	0	junction_1	348.047927734098	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCAGGTGTGGTGGTA	NA	False	NA	NA	False	NA	NA	NA	46884306	46910408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_46884468_46884693_46884959_46897647_46897738_46900681_46900791_46906841_46906976_46909683
transcript_67776.known	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_7	43.6348484585429	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-3	True	NA	-9	True	AATAAA	-17	NA	46973674	46955361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
transcript_6778.known	chr1	-	588	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	380.655027551194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-8	True	NA	-31	True	AATAAA	-6	NA	32650550	32621840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
transcript_67781.known	chr16	-	7429	9	FSM	ENSG00000171208.10	ENST00000562435.6	7429	9	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	7.36439916082772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAATATCTGATGCCATT	-2	True	NA	NA	False	TTTAAA	-32	NA	47143945	47077702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47083802_47086225_47086340_47109482_47109712_47122656_47122785_47122867_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_67782.known	chr16	-	3241	9	FSM	ENSG00000171208.10	ENST00000303155.9	3241	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	17.7200451466693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTCACTGGATTTCAT	312	False	NA	NA	False	AGTAAA	-19	NA	47143709	47081633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47083802_47086225_47086340_47109482_47109712_47122656_47122785_47122888_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_67789.nic	chr16	-	2270	8	NIC	ENSG00000171208.10	novel	7429	9	NA	NA	-82	160	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	19.8525174469031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTTTTATTTTTCCT	-6	True	NA	-11	True	AATAAA	-15	NA	47144027	47082829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_47083802_47109482_47109712_47122656_47122785_47122867_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_67794.known	chr16	-	3185	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_13	43.3152122522417	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCAGTGAGTTT	11	True	NA	NA	False	AATAAA	-16	NA	47461063	47154390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_67796.nic	chr16	-	2149	18	NIC	ENSG00000129636.13	novel	3185	18	NA	NA	-12	-75	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	96.7943634150633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTCCACTTGACTT	-1	True	NA	-16	True	AATAAA	-21	NA	47461075	47155375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162602_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_6780.known	chr1	-	598	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	336.397953818589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	703	False	NA	-20	True	AATAAA	-17	NA	32650525	32621829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_67808.nic	chr16	+	3829	32	NIC	ENSG00000102893.16	novel	3829	32	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_1	24.5647226390828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	NA	False	NA	13	True	AATAAA	-16	NA	47461277	47699745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_67809.nic	chr16	+	4084	32	NIC	ENSG00000102893.16	novel	3829	32	NA	NA	-17	255	combination_of_known_junctions	FALSE	canonical	3	120	junction_1	24.5647226390828	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTTTGAGCTCCTGC	NA	False	NA	23	True	AATAAA	-17	NA	47461277	47700000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_67810.nic	chr16	+	4432	32	NIC	ENSG00000102893.16	novel	3829	32	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_1	24.5647226390828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47461277	47700348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_67812.known	chr16	+	3829	32	FSM	ENSG00000102893.16	ENST00000566044.5	3829	32	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	33.1788267927984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	-3	True	NA	13	True	AATAAA	-16	NA	47461294	47699745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_47461427_47463881_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_67816.known	chr16	+	5464	31	FSM	ENSG00000102893.16	ENST00000299167.12	5464	31	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	40.3393383959408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGCCAATGCCTGTTTT	-6	True	NA	5	True	AGTAAA	-19	NA	47461325	47701523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_47461427_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_67823.known	chr16	+	8195	15	FSM	ENSG00000102910.14	ENST00000285737.9	8195	15	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_6	17.6844506818382	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGTTAGGATCATA	-47	True	NA	NA	False	GATAAA	-18	NA	48244299	48357349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_48244622_48252130_48252366_48256609_48256742_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_67827.known	chr16	-	2415	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	NA	False	NA	-23	True	ATTAAA	-25	NA	48365901	48360530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_48362431_48365386
transcript_67828.known	chr16	-	2110	2	FSM	ENSG00000196470.12	ENST00000394725.3	2110	2	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-2	True	NA	-23	True	ATTAAA	-25	NA	48385413	48360530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_48362431_48385203
transcript_67830.known	chr16	+	2237	4	FSM	ENSG00000260086.4	ENST00000568150.4	2244	4	7	0	7	0	multi-exon	FALSE	canonical	2	7	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGACAAA	1929	False	NA	NA	False	GATAAA	-37	NA	48623421	48746318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_48623604_48741282_48741403_48744246_48744330_48744466
transcript_67831.known	chr16	-	2442	3	FSM	ENSG00000102924.12	ENST00000219197.11	2442	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACCCAGTTGCTTCGG	-7	True	NA	2	True	AATAAA	-23	NA	49281838	49277916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_49279602_49280922_49281043_49281201
transcript_67833.known	chr16	+	1016	4	FSM	ENSG00000279249.3	ENST00000654606.1	1016	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	7994	False	NA	NA	False	AATAAA	-21	NA	49282020	49290472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_49282233_49287366_49287476_49289537_49289656_49289895
transcript_67835.known	chr16	-	7968	8	FSM	ENSG00000102935.12	ENST00000563137.7	7968	8	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_4	73.193899600824	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGCTGGTTCTCTTTCTT	-1	True	NA	3	True	AATAAA	-24	NA	49856112	49487523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_49491305_49523623_49523740_49525362_49525495_49626169_49626255_49635659_49638875_49730770_49730972_49789486_49789547_49855734
transcript_67838.known	chr16	+	2965	7	FSM	ENSG00000205423.12	ENST00000458059.7	2965	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	94.6337971105226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTTTTCTTTATTGT	NA	False	NA	16	True	AATAAA	-22	NA	50024409	50037088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_67839.known	chr16	+	656	6	FSM	ENSG00000205423.12	ENST00000562576.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	91.9251869728857	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTGCAGATGAAGT	29	False	NA	NA	False	NA	NA	NA	50025270	50035696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034106_50034157_50035416
transcript_67840.known	chr16	+	579	6	FSM	ENSG00000205423.12	ENST00000389134.9	579	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	103.895331945184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCTTGATGATGGTGA	-8	True	NA	NA	False	NA	NA	NA	50025233	50035600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_67841.known	chr16	+	1992	5	FSM	ENSG00000205423.12	ENST00000568890.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	95.1774658204346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGACTTTTTCTTTAT	13	True	NA	13	True	AATAAA	-19	NA	50025254	50037085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_67843.known	chr16	+	4416	15	FSM	ENSG00000155393.14	ENST00000299192.8	4416	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	8.07743139612982	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGTGATTTTCTG	-33	True	NA	NA	False	AATAAA	-20	NA	50065969	50107272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50066270_50066366_50066540_50068779_50068868_50070177_50070291_50072604_50072715_50075570_50075712_50078740_50079019_50083936_50084028_50084133_50084292_50084568_50084652_50086214_50086352_50094704_50094794_50100229_50100374_50102258_50102436_50104938
transcript_67848.nic	chr16	+	2603	19	NIC	ENSG00000121281.13	novel	2304	18	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_18	8.29323686974982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTAGGTCTCATTGTT	1358	False	NA	10	True	AATAAA	-24	NA	50246104	50310529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_50246204_50287911_50288351_50290456_50290661_50291735_50291898_50292675_50292826_50293353_50293503_50294639_50294752_50298903_50299032_50300714_50300874_50301081_50301215_50304359_50304552_50304924_50304960_50305502_50305587_50305776_50305850_50307049_50307148_50308326_50308412_50308666_50308793_50309547_50309647_50310453
transcript_67853.known	chr16	-	2145	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	102.880923280266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAATGTGCTTGGGGC	271	False	NA	-29	True	AATAAA	-21	NA	50368779	50319029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_67860.nic	chr16	-	973	7	ISM	ENSG00000166164.16	ENST00000394689.2	2145	17	-81	15681	60	0	5prime_fragment	FALSE	canonical	3	439	junction_4	45.8127226385374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGATCTTTGGGATGT	190	False	NA	NA	False	AATAAA	-3	NA	50368860	50334710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_67862.known	chr16	+	1579	4	FSM	ENSG00000121281.13	ENST00000568930.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTCCAGGCCAGCTGG	9102	False	NA	NA	False	NA	NA	NA	50313103	50315738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50314063_50314291_50314407_50315013_50315139_50315358
transcript_67864.nic	chr16	-	437	2	ISM	ENSG00000166164.16	ENST00000567826.1	740	5	-87	18127	-19	-18127	5prime_fragment	FALSE	canonical	3	575	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGCAGATTCCAGG	-35	True	NA	17	True	AAAAAG	-10	NA	50369007	50368143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_50368299_50368725
transcript_67866.known	chr16	+	17039	10	FSM	ENSG00000140807.7	ENST00000268459.6	17039	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	2.70801280154532	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGTTGCTCAGATCTCA	-1	True	NA	8	True	AATAAA	-16	NA	50548395	50649249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50548579_50548716_50548750_50549421_50549556_50608293_50608361_50621601_50621709_50625484_50625581_50630185_50630334_50630825_50630911_50632280_50632409_50633191
transcript_67872.known	chr16	+	3536	18	FSM	ENSG00000083799.18	ENST00000398568.6	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	13.5947272498031	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGATATGAAATCATTT	-3	True	NA	11	True	AATAAA	-18	NA	50742119	50796882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50742217_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_67873.known	chr16	+	4363	12	FSM	ENSG00000167207.14	ENST00000647318.2	4363	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.21287855128421	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCATCTTCCTTGTGACC	4	True	NA	NA	False	AATAAA	-15	NA	50693605	50733075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50693663_50699487_50699955_50707854_50707961_50710557_50712374_50716586_50716671_50716890_50716975_50719924_50720009_50722621_50722706_50723300_50723385_50725488_50725573_50729817_50729902_50731746
transcript_67874.known	chr16	+	1354	5	FSM	ENSG00000261241.8	ENST00000663343.1	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTCACAGTCTG	-18	True	NA	NA	False	AATAAA	-14	NA	50880079	50901061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50880262_50884211_50884323_50884481_50884742_50893660_50893863_50900462
transcript_67876.known	chr16	+	2248	2	FSM	ENSG00000261241.8	ENST00000576842.2	2264	2	16	0	16	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTCTGAGAGTCCCT	25	False	NA	NA	False	AATAAA	-17	NA	50880208	50884101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50880262_50881906
transcript_67880.known	chr16	-	5134	3	FSM	ENSG00000103449.13	ENST00000251020.9	5134	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	130	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTCTGTGTTTTTAG	3	True	NA	17	True	GATAAA	-7	NA	51151270	51135981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_51137553_51138687_51142146_51151165
transcript_67881.known	chr16	+	487	2	FSM	ENSG00000261238.1	ENST00000570060.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTAGTGGGCTGAGGTG	NA	False	NA	NA	False	NA	NA	NA	51149238	51149819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_51149589_51149682
transcript_67882.known	chr16	+	1377	1	FSM	ENSG00000224578.5	ENST00000562726.1	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1511	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTGCAGAACACCTAT	NA	False	NA	NA	False	GATAAA	-29	NA	51645755	51647132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_51645800_51647100
transcript_67883.known	chr16	-	4959	7	FSM	ENSG00000103460.17	ENST00000219746.14	4959	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	12.6183288204985	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAGAAATGTGGTATC	-7	True	NA	NA	False	AATAAA	-19	NA	52547143	52436416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_52439969_52444275_52444357_52445993_52446222_52450276_52450547_52463933_52464189_52468508_52468575_52546636
transcript_67887.known	chr16	+	11547	39	FSM	ENSG00000177200.18	ENST00000447540.6	11547	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.64861124425729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTCAGCCTCTGTAC	-21	True	NA	12	True	ATTAAA	-18	NA	53054990	53327497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53055078_53155925_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307954_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
transcript_67892.known	chr16	+	703	3	FSM	ENSG00000177200.18	ENST00000565442.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	-12	True	NA	NA	False	ATTAAA	-17	NA	53208450	53222755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53208710_53209481_53209814_53222643
transcript_67895.known	chr16	+	720	2	FSM	ENSG00000177200.18	ENST00000561869.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATCATGTTAGAGTC	27	True	NA	NA	False	NA	NA	NA	53055038	53121980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53055078_53121299
transcript_67896.nic	chr16	+	588	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-31	12976	-31	-34	5prime_fragment	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTCTAAGTTAAAAGAG	-6	True	NA	NA	False	AAAACA	-5	NA	53208419	53209779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_53208710_53209481
transcript_67899.known	chr16	+	4854	22	FSM	ENSG00000103479.17	ENST00000262133.11	4854	22	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_15	31.883148329365	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTTTGGTTATATTG	4	True	NA	11	True	AATAAA	-15	NA	53434470	53491648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53467057_53467170_53469915_53470186_53470382_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129
transcript_6790.known	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	247.535532802869	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	668	False	NA	-20	True	AATAAA	-17	NA	32650560	32621829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_67903.nic	chr16	+	2937	19	ISM	ENSG00000103479.17	ENST00000262133.11	4854	22	-32	11719	21	-826	5prime_fragment	FALSE	canonical	3	203	junction_15	31.064250422648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGCAGCAGTGATAGCA	-28	True	NA	NA	False	GATAAA	-22	NA	53434438	53479929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53467057_53467170_53469915_53470186_53470382_53470664_53470745_53470923_53479153_53479226_53479885
transcript_67908.known	chr16	-	2133	11	FSM	ENSG00000166971.17	ENST00000300245.8	2133	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	48.0001041665536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	-26	False	NA	NA	False	AATAAA	-20	NA	53503244	53491378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53501520_53501571_53503146
transcript_67911.known	chr16	-	2384	10	FSM	ENSG00000166971.17	ENST00000394657.12	2384	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.7406298511598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	9	True	NA	NA	False	ATTAAA	-19	NA	53503209	53491039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_67914.nic	chr16	-	1947	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	230	-46	combination_of_known_junctions	FALSE	canonical	3	33	junction_9	29.7026415252961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGCAGGAAACTACCCT	-4	True	NA	NA	False	AATAAA	-25	NA	53502976	53491693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53502699
transcript_67920.known	chr16	+	6326	21	FSM	ENSG00000103479.17	ENST00000680543.1	6326	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	55.9847077334516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGCATTTATAAATTA	NA	False	NA	-9	True	NA	NA	NA	53434417	53491628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53467170_53469915_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129_53490302_53490514
transcript_67925.known	chr16	-	1162	10	FSM	ENSG00000166971.17	ENST00000570004.5	1162	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	40.4145188432738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGCCAGTGTTTTCCA	-5	True	NA	-5	True	AGTAAA	-17	NA	53503223	53492304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503117
transcript_67926.known	chr16	-	893	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	15.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGATTTATGTGCAAAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	53703938	53695630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53696296_53700638_53700731_53703802
transcript_67929.nic	chr16	+	2182	10	NIC	ENSG00000140718.21	novel	1636	10	NA	NA	-18	-500	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	123.762317007687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCCTTAAATTTGATTA	322	False	NA	NA	False	AATAAA	-14	NA	53704137	54040226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54039344_54039435_54039545
transcript_67931.known	chr16	+	11573	9	FSM	ENSG00000140718.21	ENST00000471389.6	11573	9	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	39.645105309483	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATGCTTGGTGTTA	-6	True	NA	NA	False	AATAAA	-14	NA	53704155	54121941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761
transcript_67936.known	chr16	+	2472	11	FSM	ENSG00000140718.21	ENST00000637845.1	2472	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	118.767040882561	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTACCCACAAAAATTAAA	-4	True	NA	NA	False	CATAAA	-15	NA	53704157	54121902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761_54111890_54118380_54118807_54121375
transcript_67938.known	chr16	-	2625	4	FSM	ENSG00000177508.12	ENST00000329734.4	2625	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	11.8977121983832	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCTGTCTGCCCCCTCG	-4	True	NA	-19	True	AATAAA	-26	NA	54286787	54283303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_54283741_54284245_54284313_54284496_54285614_54285783
transcript_67942.known	chr16	-	1883	5	FSM	ENSG00000245694.11	ENST00000660344.1	1883	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	116.448218105731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTGACTCACCCGGC	-34	True	NA	-18	True	ATTAAA	-14	NA	54929189	54917955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_54919210_54920297_54920328_54923584_54923651_54925100_54925214_54928769
transcript_67943.known	chr16	-	1866	5	FSM	ENSG00000245694.11	ENST00000559598.7	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	109.130655638093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTAACCTTTTGGGGT	19	True	NA	-32	True	TATAAA	-37	NA	54928827	54917969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928493
transcript_67944.known	chr16	-	1603	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	15.1739909054935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAACCTTTTGGGGTTT	8	True	NA	-30	True	ATTAAA	-2	NA	54928838	54917967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
transcript_67949.known	chr16	+	2681	6	FSM	ENSG00000159387.8	ENST00000290552.8	2681	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.67332005306815	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTGGCCTATCTTTG	-1	True	NA	18	True	NA	NA	NA	55324202	55330756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_55325137_55326335_55326594_55327295_55327406_55327585_55327894_55328699_55329312_55330297
transcript_67956.nnic	chr16	+	2835	14	NNC	ENSG00000087245.13	novel	3514	13	NA	NA	-61	0	intron_retention	FALSE	non_canonical	0	0	junction_1	75.1492400761556	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTTGCCATCTGTTT	162	False	NA	10	True	AATAAA	-16	NA	55479136	55506237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_55479276_55479561_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_67958.known	chr16	+	3514	13	FSM	ENSG00000087245.13	ENST00000219070.9	3514	13	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	23.0452453519882	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGGCTCAAGAGAAGTG	-3	True	NA	30	True	AATAAA	-38	NA	55479197	55506691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_6796.known	chr1	+	7077	5	FSM	ENSG00000160062.15	ENST00000373510.9	7077	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	10.0343161201947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTAGTTATGTCAC	-21	True	NA	9	True	AATAAA	-15	NA	32539426	32605941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600086
transcript_67976.known	chr16	+	5313	14	FSM	ENSG00000087253.13	ENST00000262134.10	5313	14	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_12	5.15327206905976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTTCTGGTGGGTT	-6	True	NA	NA	False	ATTAAA	-17	NA	55509071	55586666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55545734_55545818_55549276_55549403_55550948_55551103_55574630_55574730_55579108_55579245_55582913
transcript_67978.known	chr16	+	832	2	FSM	ENSG00000087253.13	ENST00000566911.1	832	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCTGCAGTGGCATA	-6	True	NA	NA	False	NA	NA	NA	55509071	55526058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_55509353_55525507
transcript_6798.known	chr1	+	1943	5	FSM	ENSG00000160062.15	ENST00000316459.4	1943	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	10.8714074525794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAATCATTCATATT	-19	True	NA	NA	False	ACTAAA	-2	NA	32539428	32600990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600267
transcript_67980.known	chr16	-	1835	14	FSM	ENSG00000198848.13	ENST00000361503.8	1835	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	2.67577340475786	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGATCCAGCCGGCCTT	932	False	NA	NA	False	NA	NA	NA	55833186	55803048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_55803233_55803528_55803602_55806332_55806465_55810516_55810665_55810926_55811011_55812902_55813044_55816923_55816963_55819534_55819640_55820371_55820480_55821367_55821522_55823549_55823684_55826150_55826296_55828766_55828972_55833003
transcript_67981.known	chr16	+	3182	9	FSM	ENSG00000087258.16	ENST00000262493.12	3182	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	12.1346610995116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTCACCCTGTG	-5	True	NA	3	True	AATAAA	-19	NA	56191488	56357444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56192354_56192573_56192617_56275930_56276073_56328630_56328792_56334728_56334858_56336730_56336861_56351383_56351538_56354865_56355082_56356102
transcript_67982.known	chr16	+	5767	8	FSM	ENSG00000087258.16	ENST00000262494.12	5767	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	5.77821383318762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGAGTGTGATGTGTTGT	49	False	NA	10	True	AATAAA	-18	NA	56191782	56348199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56192354_56192573_56192617_56275930_56276073_56328630_56328792_56334728_56334858_56336730_56336861_56340833_56340988_56343762
transcript_67984.known	chr16	+	926	4	FSM	ENSG00000087258.16	ENST00000639966.1	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTAAAATTAAGAATAAG	487	False	NA	NA	False	NA	NA	NA	56192220	56329238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56192354_56192573_56192617_56275930_56276073_56328630
transcript_67986.known	chr16	-	3607	14	FSM	ENSG00000159461.15	ENST00000290649.10	3607	14	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	31.9840936798389	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTTGTGTGTGGCT	-45	True	NA	-22	True	AATAAA	-13	NA	56425545	56361451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56363057_56363920_56364106_56367443_56367528_56369192_56369328_56385918_56386023_56389184_56389376_56401732_56401844_56402984_56403119_56404908_56405042_56405203_56405245_56407963_56408117_56409423_56409589_56414251_56414345_56425072
transcript_67992.known	chr16	-	2540	18	FSM	ENSG00000125124.14	ENST00000682855.1	2540	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	41.6706480220118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTCCTAAATCTTGG	1	True	NA	NA	False	AATAAA	-21	NA	56520024	56470402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_67994.known	chr16	-	2704	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	34.6896395736537	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTGATTGATTATA	1	True	NA	0	True	ATTAAA	-17	NA	56520024	56484384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_67995.known	chr16	-	2835	17	FSM	ENSG00000125124.14	ENST00000682737.1	2835	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	43.4690982193098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	56520114	56484132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519956
transcript_67998.known	chr16	-	2404	16	FSM	ENSG00000125124.14	ENST00000682482.1	2404	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	35.8155769959882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTTCAGAGTCCAATTT	48	True	NA	-65	True	NA	NA	NA	56519977	56484511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56514452_56514681_56519745
transcript_67999.known	chr16	-	2992	16	FSM	ENSG00000125124.14	ENST00000684020.1	2992	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	35.8269916869018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	23	False	56520091	28	True	ATTAAA	-45	NA	56520068	56484356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_68000.known	chr16	-	2611	16	FSM	ENSG00000125124.14	ENST00000683020.1	2611	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	45.2695629903066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	16	False	56520091	28	True	ATTAAA	-45	NA	56520075	56484356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_68001.known	chr16	-	3117	16	FSM	ENSG00000125124.14	ENST00000682420.1	3117	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	45.4265707855362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	23	False	56520091	28	True	ATTAAA	-45	NA	56520068	56484356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498694_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_68002.known	chr16	-	3727	16	FSM	ENSG00000125124.14	ENST00000682146.1	3727	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	45.3452925401916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	16	False	56520091	28	True	ATTAAA	-45	NA	56520075	56484356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498694_56499777_56499908_56500853_56501026_56501352_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_68004.known	chr16	-	2610	17	FSM	ENSG00000125124.14	ENST00000682658.1	2610	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	44.5382121750526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTGAGTTTGTACTTT	1	True	NA	-3	True	TATAAA	-22	NA	56520024	56484449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502701_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_68010.known	chr16	+	4587	13	FSM	ENSG00000087263.17	ENST00000566157.6	4587	13	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_8	26.8762596604017	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTTCTCTCTTTAT	8	True	NA	7	True	GATAAA	-24	NA	56451553	56479104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56451767_56453262_56453409_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_68030.known	chr16	-	4393	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	0	0	0	multi-exon	TRUE	canonical	3	1151	junction_4	78.4615971174575	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGATTGTTTTGG	-5	True	NA	-7	True	AATAAA	-18	NA	56451332	56429132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
transcript_68031.known	chr16	+	2415	13	FSM	ENSG00000087263.17	ENST00000336111.9	2415	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	160.43714155048	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAGAAAA	-22	True	NA	NA	False	NA	NA	NA	56451523	56477129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56451568_56453262_56453381_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_68032.known	chr16	+	401	3	FSM	ENSG00000125148.7	ENST00000245185.6	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	-2	True	NA	15	True	AATAAA	-16	NA	56608583	56609497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56608684_56608991_56609058_56609262
transcript_68033.known	chr16	+	688	2	FSM	ENSG00000125148.7	ENST00000563985.1	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAACAGCTTTGACTTG	-2	True	NA	-6	True	NA	NA	NA	56608583	56609476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56609058_56609262
transcript_68034.known	chr16	+	704	3	FSM	ENSG00000169715.15	ENST00000306061.10	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	7297	False	NA	16	True	AATAAA	-18	NA	56625474	56627112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56625880_56626465_56626532_56626879
transcript_68035.known	chr16	+	398	3	FSM	ENSG00000205364.4	ENST00000379818.4	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	-1	True	NA	4	True	AATAAA	-17	NA	56632658	56633981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56632760_56633339_56633406_56633750
transcript_68036.known	chr16	+	425	3	FSM	ENSG00000198417.7	ENST00000334350.7	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	6	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTCAGTTTCCCTT	-1	True	NA	9	True	ATTAAA	-15	NA	56657958	56659303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56658087_56658674_56658741_56659072
transcript_68037.known	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	67	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	3	True	NA	11	True	ATTAAA	-17	NA	56658011	56659305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56658087_56658674_56658783_56659072
transcript_68038.known	chr16	-	406	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	102	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGGTTCCTGTTGTGT	-2	True	NA	-1	True	ATTAAA	-18	NA	56668065	56666730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56666971_56667311_56667378_56667965
transcript_68039.known	chr16	+	397	3	FSM	ENSG00000205358.4	ENST00000332374.5	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	7	True	NA	14	True	ATTAAA	-14	NA	56669813	56671129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56669913_56670505_56670572_56670897
transcript_6804.known	chr1	-	817	4	FSM	ENSG00000176261.16	ENST00000492007.6	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	412.267712374698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTACCTCAGCCTCCCG	-7	True	NA	NA	False	NA	NA	NA	32650549	32621310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32634767_32634793_32650432
transcript_68040.known	chr16	+	697	2	FSM	ENSG00000205358.4	ENST00000569155.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	4	True	NA	14	True	ATTAAA	-14	NA	56669839	56671129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56669913_56670505
transcript_68041.known	chr16	+	404	3	FSM	ENSG00000187193.9	ENST00000394485.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_2	54	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	0	True	NA	6	True	AATAAA	-14	NA	56682469	56684196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56682569_56683164_56683231_56683957
transcript_68042.known	chr16	+	549	3	FSM	ENSG00000187193.9	ENST00000564974.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	551.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	11	False	NA	6	True	AATAAA	-14	NA	56682480	56684196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56682569_56683164_56683387_56683957
transcript_68043.known	chr16	+	1727	1	FSM	ENSG00000187193.9	ENST00000568370.1	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	0	True	NA	6	True	AATAAA	-14	NA	56682469	56684196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56682500_56684200
transcript_68053.known	chr16	+	8234	22	FSM	ENSG00000102900.13	ENST00000308159.10	8234	22	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_7	105.537303589677	824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTGCCATGTGCCC	-20	True	NA	NA	False	AGTAAA	-15	NA	56730128	56850286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56730212_56748233_56748427_56758537_56758656_56798475_56798539_56805503_56805633_56818663_56818739_56821503_56821594_56823706_56823847_56828976_56829110_56830527_56830686_56831841_56832008_56832294_56832389_56833214_56833407_56834127_56834255_56834369_56834443_56834733_56834779_56836600_56836718_56837607_56837727_56838951_56839070_56839520_56839605_56841704_56841834_56844498
transcript_68093.known	chr16	+	1862	8	FSM	ENSG00000051108.15	ENST00000300302.9	1862	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	107.822227082644	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	2	True	NA	29	True	AATAAA	-22	NA	56932146	56943881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_68095.known	chr16	+	1782	7	FSM	ENSG00000051108.15	ENST00000379792.6	1782	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	123.199927849907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGTCATCCTAGCAG	15	False	NA	34	True	AATAAA	-27	NA	56932159	56943886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56932392_56935234_56935313_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_68096.known	chr16	+	1388	6	FSM	ENSG00000051108.15	ENST00000344114.8	1388	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.032325188638	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	2	True	NA	29	True	AATAAA	-22	NA	56932146	56943881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56942131_56942238_56943125
transcript_68099.known	chr16	+	2601	16	FSM	ENSG00000140848.17	ENST00000290776.13	2601	16	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	11.7692631696107	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGGCCCATACCAGTT	-23	True	NA	NA	False	AATAAA	-24	NA	57092582	57148369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57092791_57110707_57110923_57113287_57113468_57115475_57115551_57117495_57117568_57119194_57119279_57119560_57119651_57121092_57121192_57121673_57121761_57123413_57123474_57125859_57125994_57127848_57127904_57134774_57134827_57137148_57137283_57146084_57146322_57147550
transcript_68103.nnic	chr16	+	2025	14	NIC	ENSG00000140848.17	novel	2601	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	23.5796522451032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCTTTTTCCAAGTAA	-26	True	NA	14	True	AATAAA	-15	NA	57092579	57147964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57092791_57110707_57110923_57113287_57113468_57115475_57115551_57117495_57117568_57121092_57121192_57121673_57121761_57123413_57123474_57125859_57125994_57127848_57127904_57134774_57134827_57137148_57137283_57146084_57146322_57147550
transcript_68120.known	chr16	-	1055	8	FSM	ENSG00000172775.17	ENST00000564108.5	1055	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	384.604753385252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACAGGGAGCTCCTCCC	1	True	NA	NA	False	NA	NA	NA	57186032	57154278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57175538_57175591_57185820
transcript_68134.known	chr16	-	1086	7	FSM	ENSG00000172775.17	ENST00000567439.5	1086	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	367.845717960971	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTGCATCCTGTGT	-7	True	NA	-81	True	NA	NA	NA	57186040	57154199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185824
transcript_68138.nic	chr16	-	1662	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-39	203	intron_retention	FALSE	canonical	0	0	junction_3	343.115829163013	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGAGAAACAAACGTAG	183	False	NA	41	True	AATAAA	-23	NA	57186155	57153532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_68145.nic	chr16	-	1060	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	343.115829163013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTGTGGCCCGAATCG	183	False	NA	-16	True	NA	NA	NA	57186155	57154134	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_68147.known	chr16	-	658	5	FSM	ENSG00000172775.17	ENST00000565760.5	658	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	374.696794088233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACTAATAGAAAAGCAAC	5	True	NA	-37	True	NA	NA	NA	57186055	57172308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57172373_57172775_57172875_57173727_57173870_57174168_57174287_57185820
transcript_68152.known	chr16	+	3586	15	FSM	ENSG00000159579.14	ENST00000537866.5	3586	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	71.7639625893847	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATGAATTATTGACTA	9	True	NA	23	True	AATAAA	-20	NA	57186332	57239957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57187051_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_68155.known	chr16	+	3503	15	FSM	ENSG00000159579.14	ENST00000394420.9	3503	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	40.6687088257178	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	5	True	NA	36	True	AATAAA	-21	NA	57186328	57240469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57186452_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_68159.nic	chr16	+	2457	15	NIC	ENSG00000159579.14	novel	3586	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	61.0324436973768	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	135	False	NA	NA	False	AAAAAG	-8	NA	57186285	57239046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_6816.known	chr1	+	7883	12	FSM	ENSG00000162521.19	ENST00000373493.10	7883	12	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_9	132.830594902488	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	32651207	32686211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_68160.nic	chr16	+	3880	15	NIC	ENSG00000159579.14	novel	3503	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	61.0324436973768	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	135	False	NA	36	True	AATAAA	-21	NA	57186285	57240469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_68168.known	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	16.2185079461706	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	13	True	NA	44	True	AGTAAA	-35	NA	57245258	57253635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
transcript_68169.known	chr16	+	547	5	FSM	ENSG00000102931.8	ENST00000562023.5	547	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.1708865243321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGACCTATTTATCCTG	-1	True	NA	NA	False	NA	NA	NA	57245349	57252424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57245406_57246079_57246142_57249779_57249853_57250410_57250508_57252165
transcript_68171.known	chr16	-	1497	4	FSM	ENSG00000102934.10	ENST00000219207.10	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2.16024689946929	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGACAAGATGTTGGCAA	-4	True	NA	-10	True	AATAAA	-21	NA	57284672	57256096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57257030_57258461_57258585_57261896_57262071_57284405
transcript_68173.known	chr16	+	3285	3	FSM	ENSG00000006210.7	ENST00000006053.7	3285	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATGGGTGATTTCTCT	-1	True	NA	6	True	AATAAA	-19	NA	57372489	57385044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57372639_57379633_57379755_57382029
transcript_68176.known	chr16	-	2016	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	321.627016122713	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	NA	False	NA	-18	True	AATAAA	-15	NA	57447419	57428186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
transcript_68178.known	chr16	-	2021	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_2	116.953984006531	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	8	True	NA	-18	True	AATAAA	-15	NA	57447385	57428186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_6818.known	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	591.445071606208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	25	True	NA	30	True	AATAAA	-21	NA	32651233	32680657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
transcript_68188.known	chr16	-	1137	8	FSM	ENSG00000005194.15	ENST00000568940.5	1137	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	379.433304617638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTCATGTTAAGAGAAG	25	False	NA	NA	False	NA	NA	NA	57447368	57428937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57429281_57430257_57430340_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_68206.known	chr16	+	1630	9	FSM	ENSG00000088682.14	ENST00000262507.11	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	25.5119457313628	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	-11	True	NA	16	True	AATAAA	-17	NA	57447478	57461270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_6821.known	chr1	+	1674	12	FSM	ENSG00000162521.19	ENST00000458695.6	1674	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	594.429638427731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTAAGGAATAGAGCCAA	147	False	NA	NA	False	AGTAAA	-9	NA	32651355	32680040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651433_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_68213.known	chr16	+	1764	9	FSM	ENSG00000102978.13	ENST00000219252.10	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_5	36.3797247790579	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	10	True	NA	28	True	AATAAA	-18	NA	57462678	57472009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57462811_57463028_57463079_57465952_57466022_57466174_57466228_57469164_57469294_57469709_57469762_57469960_57470130_57470279_57470355_57470974
transcript_68222.known	chr16	-	2767	9	FSM	ENSG00000125170.11	ENST00000340099.9	2767	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	45.071471021035	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTCTGTTAATCAATAA	-10	True	NA	-4	True	AATAAA	-15	NA	57486493	57471960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441_57479689_57486304
transcript_68225.known	chr16	+	1482	8	FSM	ENSG00000088682.14	ENST00000567072.5	1482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.7300647563773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATAAATATGTTTG	4	True	NA	-12	True	NA	NA	NA	57447493	57461242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456627_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_68237.nic	chr16	-	2970	8	NIC	ENSG00000125170.11	novel	2767	9	NA	NA	-47	0	intron_retention	FALSE	canonical	3	81	junction_7	48.145188582801	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCTCTGGTTTTCTCC	NA	False	NA	-5	True	AATAAA	-19	NA	57486540	57471921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441_57479689_57486304
transcript_68239.known	chr16	-	1848	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	13.1086511393765	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACAGCAGGTGGCTTC	6609	False	NA	NA	False	NA	NA	NA	57479874	57472876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_68248.known	chr16	-	2851	7	FSM	ENSG00000125170.11	ENST00000566936.5	2851	7	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	10.6562449087639	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCTCTGGTTTTCTCC	6678	False	NA	-5	True	AATAAA	-19	NA	57479805	57471921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_68250.known	chr16	+	882	6	FSM	ENSG00000088682.14	ENST00000567933.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	83.6946832242049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTGAAAAATGAGATG	7	True	NA	NA	False	NA	NA	NA	57447496	57460873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57459564_57459721_57460050_57460105_57460588
transcript_68251.known	chr16	+	1027	5	FSM	ENSG00000088682.14	ENST00000568790.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	17.0733710789639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCAATGTGATGCTTG	-8	True	NA	NA	False	NA	NA	NA	57447481	57457412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930
transcript_68253.known	chr16	+	518	2	FSM	ENSG00000102978.13	ENST00000564626.1	518	2	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTTTCACCCCTAGCC	108	False	NA	NA	False	TATAAA	-40	NA	57462776	57463512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57462811_57463028
transcript_68254.known	chr16	-	2432	9	FSM	ENSG00000135736.6	ENST00000258214.3	2432	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	4.65698400254929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAATGAATGAATG	-6	True	NA	NA	False	AATAAA	-15	NA	57536571	57512180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57512871_57515340_57515445_57516292_57516464_57518067_57518278_57518624_57518742_57521067_57521177_57525900_57526128_57528592_57529325_57536499
transcript_6826.known	chr1	+	762	4	FSM	ENSG00000162521.19	ENST00000401893.7	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	139.452102490027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGTGCTGTTTAAGCA	1	True	NA	NA	False	NA	NA	NA	32651209	32668579	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224
transcript_68263.nnic	chr16	+	4070	12	NNC	ENSG00000159618.16	novel	504	3	NA	NA	-14017	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_8	4.99752004613991	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTACTGGTATTATCATT	NA	False	NA	15	True	AATAAA	-32	NA	57528625	57577189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_57529420_57562055_57562158_57562383_57562460_57563090_57563248_57563847_57563980_57565033_57565151_57566598_57566752_57567469_57567592_57567855_57568125_57570417_57570536_57574814_57575093_57575437
transcript_68265.known	chr16	+	3820	15	FSM	ENSG00000205336.14	ENST00000540164.6	3820	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.14934395500694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGCATTTTGGGTCATT	50	False	NA	NA	False	AATAAA	-32	NA	57639517	57665032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57639671_57641590_57641709_57650252_57650352_57651199_57651623_57653202_57653336_57653985_57654134_57655398_57655531_57655875_57655993_57656225_57656272_57656513_57656618_57657372_57657492_57659412_57659682_57660767_57660877_57661696_57661966_57663451
transcript_68267.known	chr16	+	4254	14	FSM	ENSG00000205336.14	ENST00000568909.5	4254	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.38286668112247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGTTCCACCAAATCAAT	262	False	NA	NA	False	ATTAAA	-33	NA	57619997	57665580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57620137_57650252_57650352_57651199_57651623_57653202_57653336_57653985_57654134_57655398_57655531_57655875_57655993_57656225_57656272_57656513_57656618_57657372_57657492_57659394_57659682_57660767_57660877_57661696_57661966_57663451
transcript_6827.known	chr1	+	690	2	FSM	ENSG00000162521.19	ENST00000465780.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACAATGAGTCTAGT	17	True	NA	NA	False	AAAAAG	-6	NA	32651225	32652506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913
transcript_68271.known	chr16	+	3387	19	FSM	ENSG00000159625.15	ENST00000360716.8	3387	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.916245694581702	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTGGCTCACACCTG	-7	True	NA	NA	False	ATTAAA	-16	NA	57694805	57731805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57694853_57696463_57696595_57697912_57698153_57698849_57699025_57700144_57700271_57701935_57702131_57704875_57705035_57707459_57707679_57718346_57718476_57721666_57721740_57722712_57722842_57723001_57723131_57724614_57724836_57726067_57726284_57726831_57726943_57727298_57727410_57728389_57728585_57730930_57731071_57731164
transcript_68286.nic	chr16	+	2714	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_16	83.2038513917871	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	-32	True	NA	13	True	ATTAAA	-13	NA	57735724	57757244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
transcript_68287.known	chr16	+	2618	20	FSM	ENSG00000140854.13	ENST00000379661.8	2618	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.2038513917871	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	13	True	NA	13	True	ATTAAA	-13	NA	57735769	57757244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_68293.nic	chr16	+	2824	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	34	0	intron_retention	FALSE	canonical	0	0	junction_16	93.6534544428868	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	8	True	NA	13	True	ATTAAA	-13	NA	57735824	57757244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57736117_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_6831.known	chr1	+	5293	7	FSM	ENSG00000162522.11	ENST00000373481.7	5293	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	15.0517625398342	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	12	True	NA	14	True	ATTAAA	-14	NA	32754020	32774970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
transcript_6832.known	chr1	+	5294	7	FSM	ENSG00000162522.11	ENST00000373480.1	5294	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	27.7108081601546	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	36	False	NA	14	True	ATTAAA	-14	NA	32765666	32774970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
transcript_6833.known	chr1	+	684	4	FSM	ENSG00000162522.11	ENST00000468130.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	7.40870359029762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGTTAGAAAATCTTG	10	True	NA	58	True	TATAAA	-5	NA	32754018	32768946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651
transcript_68360.known	chr16	-	3359	20	FSM	ENSG00000140859.16	ENST00000445690.7	3359	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	24.0990568889384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	-38	True	NA	-10	True	AATAAA	-19	NA	57802491	57758216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57758910_57759124_57759154_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57794998_57795142_57798071_57798283_57802369
transcript_68365.known	chr16	-	3427	19	FSM	ENSG00000140859.16	ENST00000379655.8	3427	19	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_14	12.195425169371	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	7757	False	NA	-10	True	AATAAA	-19	NA	57802588	57758216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57758910_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57794998_57795142_57798071_57798283_57802369
transcript_68371.nic	chr16	-	3201	18	NIC	ENSG00000140859.16	novel	3427	19	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	21.3492947785929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	7840	False	NA	-10	True	AATAAA	-19	NA	57802505	57758216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57758910_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57798071_57798283_57802369
transcript_68373.nnic	chr16	-	3208	18	NIC	ENSG00000140859.16	novel	3427	19	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	21.0237960416286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	7841	False	NA	-10	True	AATAAA	-19	NA	57802504	57758216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57758910_57759727_57759837_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57794998_57795142_57798071_57798283_57802369
transcript_68378.nic	chr16	-	773	4	NIC	ENSG00000140859.16	novel	424	3	NA	NA	1	-2171	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	27.7408643620842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTCCTGATAATAGCTA	-37	True	NA	NA	False	AGTAAA	-22	NA	57802490	57790768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57791067_57794998_57795142_57798071_57798283_57802369
transcript_68380.nic	chr16	-	2536	2	ISM	ENSG00000140859.16	ENST00000566914.1	724	4	-19	10469	2	-804	5prime_fragment	FALSE	canonical	3	64	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTGTGTAAGGCCTG	-36	True	NA	NA	False	AAAAAG	-11	NA	57802489	57795866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_57798283_57802369
transcript_68383.known	chr16	+	2360	3	FSM	ENSG00000159648.13	ENST00000562915.1	2360	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	8	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCTGCTCTATCCATGA	1	True	NA	NA	False	AATAAA	-20	NA	57985180	57988116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57985268_57985481_57985547_57985908
transcript_68385.known	chr16	+	2248	7	FSM	ENSG00000103005.12	ENST00000219281.8	2248	7	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_5	40.297504747675	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGGACTACTTGTA	-22	True	NA	20	True	AATAAA	-22	NA	58001406	58021618	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140
transcript_68387.known	chr16	+	1212	6	FSM	ENSG00000103005.12	ENST00000539737.6	1212	6	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_3	262.670439905217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCTCTCTTCCTCTCC	-24	True	NA	NA	False	NA	NA	NA	58001404	58020634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58017333_58017440_58018971_58019056_58020140
transcript_68389.known	chr16	+	1217	4	FSM	ENSG00000103005.12	ENST00000423271.7	1217	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	329.709973562625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCATTTCACTCACCCT	-22	True	NA	NA	False	NA	NA	NA	58001406	58011708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011017
transcript_68391.known	chr16	+	1751	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_3	329.238852844287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	-9	True	NA	7	True	AATAAA	-27	NA	58001419	58013558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
transcript_68395.known	chr16	-	517	2	FSM	ENSG00000166188.3	ENST00000562909.1	517	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGGAGAGCCAGGCCC	865	False	NA	NA	False	NA	NA	NA	58000453	57998058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57998523_58000400
transcript_68396.known	chr16	-	5027	2	FSM	ENSG00000166188.3	ENST00000299237.3	5027	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCACTGCTTGTTCTG	-5	True	NA	-7	True	AGTAAA	-19	NA	58000672	57994675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57998523_57999492
transcript_68401.nnic	chr16	+	4236	11	NNC	ENSG00000102996.5	novel	4062	10	NA	NA	-233	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	90.0478206288192	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTGTTTGTAAGGC	5130	False	NA	23	True	AATAAA	-17	NA	58025520	58046901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_58026513_58037471_58037621_58038265_58038395_58039874_58040183_58040536_58040699_58041616_58041871_58042230_58042370_58043209_58043361_58043511_58043628_58045006_58046109_58046167
transcript_6841.known	chr1	-	2443	13	FSM	ENSG00000134684.12	ENST00000373477.9	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_6	107.08106352977	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATGTGAGCTGGAC	-8	True	NA	-33	True	AATAAA	-16	NA	32817358	32775238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
transcript_68412.known	chr16	+	4062	10	FSM	ENSG00000102996.5	ENST00000219271.4	4062	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	31.6333157709821	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTGTTTGTAAGGC	-35	True	NA	23	True	AATAAA	-17	NA	58025753	58046901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58026513_58037471_58037621_58038265_58038395_58039874_58040183_58040536_58040699_58041616_58041871_58042230_58042370_58043209_58043361_58043511_58043628_58045006
transcript_68430.known	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	31.2512399753994	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-8	True	NA	-3	True	AATAAA	-24	NA	58129381	58113591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
transcript_68433.known	chr16	+	5272	9	FSM	ENSG00000103021.10	ENST00000219299.8	5272	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	11.0049704679295	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	-27	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_68440.known	chr16	+	891	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-11	5009	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	27.7885602655599	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAATTGAAAAAGAAA	14	True	NA	NA	False	AATATA	-43	NA	58249976	58267549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259869_58259869_58259935_58262384_58262541_58267478
transcript_68441.known	chr16	+	5110	8	FSM	ENSG00000103021.10	ENST00000443128.6	5110	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.4729357369109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	-27	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58250116_58252726_58252854_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_68444.known	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	-20	True	NA	19	True	AATACA	-22	NA	58392470	58406147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58392788_58403097_58403332_58404498
transcript_68446.known	chr16	+	1932	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	-2	True	NA	18	True	AATAAA	-19	NA	58392393	58406036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58392788_58404498
transcript_68448.known	chr16	-	655	1	FSM	ENSG00000276131.1	ENST00000613275.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAAGTCCGACCCTTTC	NA	False	NA	-11	True	AATAAA	-24	NA	58392807	58392152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58392200_58392800
transcript_68453.known	chr16	+	3324	16	FSM	ENSG00000103034.15	ENST00000258187.9	3324	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	25.0105755409365	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTCATTTCTCCCCTG	-8	True	NA	24	True	ATTAAA	-25	NA	58463664	58513628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58463798_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_68456.known	chr16	+	3626	16	FSM	ENSG00000103034.15	ENST00000394282.8	3626	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	36.3455025492227	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	19	False	NA	15	True	ATTAAA	-16	NA	58464023	58513619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58464468_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_6846.known	chr1	-	2248	12	FSM	ENSG00000134684.12	ENST00000675785.1	2248	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	340.375825345072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCCATAAGGCATCTCA	-30	True	NA	-103	True	AATGAA	-39	NA	32817380	32775308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32817187
transcript_68466.known	chr16	+	1375	15	FSM	ENSG00000103034.15	ENST00000356752.8	1375	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	54.2443921676025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTTTTAAGGGGCTC	-1	True	NA	NA	False	NA	NA	NA	58500142	58511735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58500270_58500987_58501078_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_68470.known	chr16	+	3265	14	FSM	ENSG00000103034.15	ENST00000566192.5	3265	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	42.3346767091826	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	NA	False	NA	15	True	ATTAAA	-16	NA	58500046	58513619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_68479.nic	chr16	+	2589	3	ISM	ENSG00000103034.15	ENST00000562764.5	610	5	58	6910	-15	-2050	5prime_fragment	FALSE	canonical	3	92	junction_1	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGATAGAGAGAATGGGT	-35	True	NA	NA	False	AAAAAG	-19	NA	58463688	58497348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_58463798_58487755_58487851_58494963
transcript_68482.known	chr16	+	2700	1	FSM	ENSG00000103034.15	ENST00000563209.1	2700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTCCAGTGTGGTGAT	4800	False	NA	10	True	AATAAA	-10	NA	58510710	58513410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58510700_58513400
transcript_68485.known	chr16	-	7660	49	FSM	ENSG00000125107.19	ENST00000569240.5	7660	49	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_30	171.496809929433	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCTGGAACTTCTTG	-2	True	NA	-17	True	AATACA	-13	NA	58629834	58520694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178_58525360_58525988_58526139_58528474_58528649_58530245_58530348_58531957_58532076_58532231_58532396_58534146_58534396_58536988_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767_58539960_58541500_58541621_58542230_58542336_58542427_58542569_58543606_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556861_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
transcript_68491.known	chr16	-	4999	31	FSM	ENSG00000125107.19	ENST00000441024.6	4999	31	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_12	76.9448287194576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATCTGACAATCTCA	-6	True	NA	NA	False	AATAAA	-20	NA	58629838	58543326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
transcript_68495.known	chr16	+	2042	9	FSM	ENSG00000103037.12	ENST00000310682.6	2042	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	26.5753645318366	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGGGGAAAAGGATAT	0	True	NA	NA	False	TTTAAA	-39	NA	58515478	58519662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58515565_58515790_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_68510.known	chr16	+	6256	8	FSM	ENSG00000103037.12	ENST00000219315.9	6256	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	21.3101489666213	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTGTGTTCAAC	-7	True	NA	2	True	AATAAA	-18	NA	58515516	58523842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58515565_58515790_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_68541.nic	chr16	-	2685	12	NIC	ENSG00000103042.9	novel	4058	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	56.1363452337106	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGCTGGGCGCAGTGG	4	True	NA	NA	False	NA	NA	NA	58684755	58666371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684084_58684716
transcript_68542.known	chr16	-	4058	12	FSM	ENSG00000103042.9	ENST00000219320.9	4058	12	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_11	32.0930980453549	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTCCCCTGTGTCTGA	-11	True	NA	-6	True	AATAAA	-19	NA	58684770	58665108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
transcript_68567.known	chr16	-	2421	10	FSM	ENSG00000125166.13	ENST00000245206.10	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_8	58.0748771675386	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTACTAAGTTATC	0	True	NA	-15	True	AATAAA	-17	NA	58734316	58707130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
transcript_6857.known	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	347.176093647014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-7	True	NA	-77	True	NA	NA	NA	32817357	32775282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
transcript_68570.known	chr16	-	1615	9	FSM	ENSG00000125166.13	ENST00000434819.2	1615	9	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_7	387.736057131652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACACGTTAGAGGCT	-10	True	NA	NA	False	NA	NA	NA	58734326	58707817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58723745_58723903_58734139
transcript_6858.known	chr1	-	2784	11	FSM	ENSG00000134684.12	ENST00000674654.1	2784	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	365.637853620218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCATAAATTCAAATAAAA	-21	True	NA	-67	True	NA	NA	NA	32817371	32775272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32787076_32791161_32791255_32797762_32797844_32810590_32810767_32810910_32811058_32817187
transcript_68582.known	chr16	-	981	5	FSM	ENSG00000125166.13	ENST00000496461.5	981	5	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_3	44.5028089001133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAGCAACAGTGGTGAA	14	True	NA	NA	False	NA	NA	NA	58734302	58718216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
transcript_68584.known	chr16	-	987	3	FSM	ENSG00000125166.13	ENST00000492378.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_1	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTAGTAGTAATCCTGA	-19	True	NA	NA	False	AATAAA	-29	NA	58734335	58721644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58722279_58723745_58723903_58734139
transcript_68585.known	chr16	-	566	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2711	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGCTATCAACCT	NA	False	NA	NA	False	AATAAA	-30	NA	61055964	61055398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_61055400_61056000
transcript_68587.known	chr16	-	3986	9	FSM	ENSG00000150394.14	ENST00000584337.5	3986	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.1514304763539	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTTCTCTGAAGAAA	1	True	NA	NA	False	AATAAA	-43	NA	62036402	61725165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_61727216_61789345_61789483_61817478_61817733_61820925_61821114_61825011_61825180_61857118_61857239_61901178_61901474_62021151_62021603_62036079
transcript_68590.known	chr16	-	6722	13	FSM	ENSG00000140937.14	ENST00000268603.9	6722	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	3.09569593683445	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGATGAGGCAGATTT	1	True	NA	NA	False	AATAAA	-22	NA	65122063	64943752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_64948100_64950766_64951019_64971578_64971697_64971930_64972065_64972903_64973041_64982047_64982302_64988156_64988345_64991767_64991936_64992914_64993035_64998561_64998857_65004641_65005042_65053803_65053929_65121879
transcript_68592.nnic	chr16	-	643	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-71	5	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_2	311.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235004	65229840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65230206_65233014_65233174_65234885
transcript_68594.nnic	chr16	-	772	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-71	-5	-71	5	multi-exon	FALSE	canonical	3	159	junction_2	293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235004	65229840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_65230206_65233014_65233303_65234885
transcript_68596.nnic	chr16	-	338	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-10	at_least_one_novel_splicesite	FALSE	canonical	3	204	junction_1	28.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	NA	False	NA	-29	True	AATAAA	-17	NA	65235004	65227904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65228022_65233014_65233117_65234885
transcript_68597.nnic	chr16	-	395	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-10	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_2	41	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	NA	False	NA	-29	True	AATAAA	-17	NA	65235004	65227904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65228022_65233014_65233174_65234885
transcript_68598.nnic	chr16	-	525	3	NIC	ENSG00000260834.2	novel	146	2	NA	NA	-72	-10	combination_of_known_splicesites	FALSE	canonical	3	159	junction_2	22.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	NA	False	NA	-29	True	AATAAA	-17	NA	65235005	65227904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_65228022_65233014_65233303_65234885
transcript_68600.nnic	chr16	-	586	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-71	5	at_least_one_novel_splicesite	FALSE	canonical	3	261	junction_2	242	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235004	65229840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65230206_65233014_65233117_65234885
transcript_68602.known	chr16	-	146	2	FSM	ENSG00000260834.2	ENST00000565901.1	146	2	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACACATGTGTACAGCA	8	True	NA	-19	True	AATAAA	-27	NA	65234904	65227894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_65228022_65234885
transcript_68603.nnic	chr16	-	485	2	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-72	5	combination_of_known_splicesites	FALSE	canonical	3	1912	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235005	65229840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_65230206_65234885
transcript_68605.known	chr16	-	2266	11	FSM	ENSG00000166548.17	ENST00000567357.6	2266	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	9.57131129992124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGGTCCTGAAGCTTT	2272	False	NA	-13	True	AATAAA	-13	NA	66550213	66510746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66547970_66548066_66548977_66549010_66549937
transcript_68607.known	chr16	-	4824	10	FSM	ENSG00000166548.17	ENST00000544898.6	4824	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	5.43877255578685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGAGTACTGTGCAG	0	True	NA	NA	False	AATAAA	-15	NA	66550122	66508002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977_66549010_66549937
transcript_68608.known	chr16	-	1005	10	FSM	ENSG00000166548.17	ENST00000677715.1	1005	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.6173940004456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTAGTGTCTTTGTCATG	2715	False	NA	NA	False	NA	NA	NA	66549770	66511830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977_66549010_66549576
transcript_68610.known	chr16	-	2745	9	FSM	ENSG00000166548.17	ENST00000527800.6	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	3.39116499156263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCCTGAAGCTTTGGA	9	True	NA	-10	True	AATAAA	-16	NA	66549856	66510743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977
transcript_68612.known	chr16	-	1120	9	FSM	ENSG00000166548.17	ENST00000545043.6	1120	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	8.70344759276461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCGTCTCAGCCTTCAT	0	True	NA	NA	False	NA	NA	NA	66550122	66511631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66548977_66549010_66549937
transcript_68613.known	chr16	-	2585	8	FSM	ENSG00000166548.17	ENST00000677555.1	2585	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	8.28078671210825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAGCAGAAAACAAGAGA	5	True	NA	-99	True	NA	NA	NA	66549860	66510832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66548977
transcript_68615.known	chr16	-	2930	8	FSM	ENSG00000166548.17	ENST00000677420.1	2930	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	7.49965985623239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGAAGCATTGCTGGT	2376	False	NA	-24	True	AATAAA	-2	NA	66550109	66510757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66541878_66541954_66548977
transcript_68616.known	chr16	+	1910	1	FSM	ENSG00000261519.3	ENST00000563151.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66549279	66551189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66549300_66551200
transcript_68617.known	chr16	+	656	4	FSM	ENSG00000217555.13	ENST00000264001.9	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	77.5112895003044	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	-36	True	NA	21	True	ATTAAA	-21	NA	66552575	66566068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66558189_66558349_66563121_66563218_66565885
transcript_68618.known	chr16	+	508	3	FSM	ENSG00000217555.13	ENST00000351137.8	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	42.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66563121_66563218_66565885
transcript_68619.known	chr16	+	571	3	FSM	ENSG00000217555.13	ENST00000345436.8	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	50	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66558189_66558349_66565885
transcript_68621.known	chr16	+	546	3	FSM	ENSG00000217555.13	ENST00000534692.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTCTTTACTGCCTGG	-49	True	NA	NA	False	NA	NA	NA	66552562	66566251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66563071_66563218_66566082
transcript_68622.known	chr16	+	412	2	FSM	ENSG00000217555.13	ENST00000362093.4	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66565885
transcript_68623.known	chr16	+	585	3	FSM	ENSG00000254788.7	ENST00000527729.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCTTCCTCTCGTTGC	1	True	NA	NA	False	CATAAA	-27	NA	66552612	66579135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66577103_66577203_66578830
transcript_68625.known	chr16	+	2159	6	FSM	ENSG00000140931.20	ENST00000361909.8	2159	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	110.653694018772	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTTCCCTAACCTT	128	False	NA	28	True	AATACA	-24	NA	66604275	66613892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604556_66604730_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
transcript_68631.known	chr16	+	1901	5	FSM	ENSG00000140931.20	ENST00000567572.6	1901	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	16.2076370887307	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATCCTTTATTTCCCTA	-1	True	NA	23	True	AATACA	-19	NA	66604703	66613887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
transcript_68633.known	chr16	+	824	4	FSM	ENSG00000140931.20	ENST00000564060.5	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	128.781468646179	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGCAGAGCCTTGTC	-5	True	NA	NA	False	NA	NA	NA	66604731	66612934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604953_66608308_66608465_66609882_66610004_66612608
transcript_68635.known	chr16	+	1950	5	FSM	ENSG00000140931.20	ENST00000566756.5	1950	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	119.101847172913	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTTTAGCAAAAATACA	4	True	NA	-15	True	NA	NA	NA	66604740	66613849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604953_66608308_66608465_66609434_66609531_66609758_66610004_66612608
transcript_68638.known	chr16	-	4326	13	FSM	ENSG00000135720.13	ENST00000258198.7	4326	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	34.9221356098901	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGGCTTTCTTTAT	1	True	NA	-3	True	AATAAA	-23	NA	66751609	66720892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_68643.known	chr16	-	1502	12	FSM	ENSG00000135720.13	ENST00000443351.6	1502	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	87.0948945757271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCACATCTGGGCTTC	9	True	NA	NA	False	NA	NA	NA	66751601	66723477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66749196_66749314_66751272_66751347_66751484
transcript_68651.nic	chr16	-	1084	7	ISM	ENSG00000135720.13	ENST00000258198.7	4326	13	-230	11539	-230	-423	5prime_fragment	FALSE	canonical	3	242	junction_3	38.2651567646367	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGACTTGTTGTATAAGT	-13	True	NA	NA	False	NA	NA	NA	66751839	66732431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_68655.known	chr16	-	1909	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_20	406.688136045299	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTAGTCTTGTTCTT	-33	True	NA	NA	False	AATAAA	-17	NA	66830976	66802879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
transcript_68661.known	chr16	-	1813	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	0	0	0	multi-exon	FALSE	canonical	3	1311	junction_19	83.7365939987723	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-33	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_68663.known	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_18	320.845622660255	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-12	True	NA	NA	False	NA	NA	NA	66830955	66802911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_68686.nic	chr16	-	753	9	ISM	ENSG00000159593.15	ENST00000290810.8	1813	20	-1	14556	0	0	5prime_fragment	FALSE	canonical	3	1311	junction_8	87.0386946995415	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGAAGTATGTCCTTT	-34	True	NA	NA	False	NA	NA	NA	66830977	66817433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_68688.known	chr16	+	1518	7	FSM	ENSG00000168748.14	ENST00000338437.7	1518	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	5.90668171555645	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTGAGTGCTTGTGC	-2	True	NA	NA	False	AATAAA	-22	NA	66844413	66854147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66844528_66847029_66847228_66850540_66850660_66851462_66851559_66851663_66851727_66852711_66852868_66853375
transcript_68695.known	chr16	+	6997	2	FSM	ENSG00000172840.7	ENST00000311765.4	6997	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTAGTTTCTTTTGG	-44	True	NA	0	True	ATTAAA	-24	NA	66880514	66891101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66880641_66884230
transcript_68697.known	chr16	-	668	5	FSM	ENSG00000166595.12	ENST00000422424.7	668	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	492.605509002894	564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCAGCATGCCTTGGTG	-8	True	NA	-13	True	AATAAA	-16	NA	66934402	66932064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_68703.known	chr16	+	3858	13	FSM	ENSG00000172828.13	ENST00000303334.9	3858	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.53432938662683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGGTCCACACTGCC	4	True	NA	24	True	AATAAA	-16	NA	66961265	66975149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66961390_66963178_66963384_66963490_66963630_66963801_66963936_66964356_66964511_66964622_66964728_66966243_66966346_66966724_66966866_66969678_66969760_66971171_66971320_66972355_66972506_66972667_66972747_66972853
transcript_68704.known	chr16	+	3868	12	FSM	ENSG00000172831.14	ENST00000417689.6	3868	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	35.0916156311348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAAATAAATTCT	-26	True	NA	-10	True	NA	NA	NA	66934443	66945069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942738_66943298_66943372_66943838
transcript_68706.known	chr16	+	2871	12	FSM	ENSG00000172831.14	ENST00000317091.10	2871	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	20.1100279249059	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTGCCTCTCCCC	-7	True	NA	17	True	AATAAA	-18	NA	66935515	66945096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_68713.known	chr16	+	3391	12	FSM	ENSG00000172831.14	ENST00000568470.6	3391	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	30.057520613892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1	True	NA	NA	False	NA	NA	NA	66934470	66944306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66935977_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_6872.known	chr1	+	4220	7	FSM	ENSG00000116497.18	ENST00000373475.10	4220	7	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_3	57.5403240248861	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	0	True	NA	20	True	AATAAA	-17	NA	32817652	32858875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
transcript_68739.nnic	chr16	+	2943	10	NIC	ENSG00000172831.14	novel	2871	12	NA	NA	-26	111	intron_retention	FALSE	canonical	2	4	junction_1	38.2041300850517	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAGGGAAAAATATGAGA	165	False	NA	NA	False	AGTAAA	-31	NA	66934417	66944417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_66935712_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_68749.nnic	chr16	+	3086	10	NIC	ENSG00000172831.14	novel	3391	12	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_1	39.4229988649541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	176	False	NA	NA	False	NA	NA	NA	66934428	66944306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_66935977_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_68773.known	chr16	+	3817	13	FSM	ENSG00000172828.13	ENST00000394037.5	3817	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1.84842275106824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTGGAAGCTTTGTTCT	-17	True	NA	-29	True	NA	NA	NA	66961244	66975096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66961390_66963178_66963384_66963490_66963630_66963801_66963936_66964356_66964511_66964622_66964728_66966243_66966346_66966724_66966866_66969678_66969760_66971171_66971320_66972355_66972506_66972676_66972747_66972853
transcript_68777.known	chr16	+	584	6	FSM	ENSG00000067955.15	ENST00000561924.6	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	256.669904741479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACACATTGCTTCTAG	12	False	NA	-46	True	NA	NA	NA	67029115	67098811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_68779.known	chr16	+	3103	6	FSM	ENSG00000067955.15	ENST00000412916.7	3103	6	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	142.009295470402	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	-11	True	NA	105	True	AATAAA	-18	NA	67029148	67101058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082309_67098709
transcript_68782.known	chr16	+	3134	6	FSM	ENSG00000067955.15	ENST00000290858.11	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	125.195846576474	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	-11	True	NA	105	True	AATAAA	-18	NA	67029148	67101058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_68798.known	chr16	+	1353	17	FSM	ENSG00000125149.12	ENST00000569600.5	1353	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	35.0708546196126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCACCACCCATGCCC	15	True	NA	NA	False	NA	NA	NA	67109962	67147131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67109990_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_68801.nic	chr16	+	2474	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	2	-327	intron_retention	FALSE	canonical	3	80	junction_1	23.506647995833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCATGTACAGCCTCAT	-5	True	NA	6	True	NA	NA	NA	67109942	67148217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_68802.nic	chr16	+	2750	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	2	-51	intron_retention	FALSE	canonical	3	80	junction_1	23.506647995833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAATGGCCTGCCATG	-5	True	NA	8	True	AATAAA	-12	NA	67109942	67148493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_68810.known	chr16	-	2702	2	FSM	ENSG00000237172.4	ENST00000449549.4	2702	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTCTTCTCAGTTC	-21	True	NA	-15	True	ATTAAA	-16	NA	67150998	67148103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67150672_67150864
transcript_68811.known	chr16	-	1483	5	FSM	ENSG00000102871.16	ENST00000345057.9	1483	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	3.20156211871642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGTAGTAGTGGCTTAC	-6	True	NA	10	True	AATAAA	-28	NA	67159909	67154184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67154960_67155095_67155295_67155376_67155655_67156509_67156669_67159837
transcript_68814.nnic	chr16	-	1322	4	NIC	ENSG00000102871.16	novel	1483	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGTAGTAGTGGCTTAC	-4	True	NA	10	True	AATAAA	-28	NA	67159907	67154184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67154960_67155095_67155295_67155376_67155655_67159837
transcript_68815.known	chr16	+	1630	3	FSM	ENSG00000135722.9	ENST00000258200.8	1630	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCGTCCTATTAAAGG	-10	True	NA	NA	False	AATAAA	-15	NA	67159956	67164174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67160057_67161734_67161938_67162847
transcript_68822.known	chr16	-	3500	8	FSM	ENSG00000196123.13	ENST00000561621.5	3500	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.2072118575155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGGCCTTTG	19	True	NA	-7	True	ATTAAA	-12	NA	67183952	67175603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67176976_67178009_67178098_67178198_67178505_67179429_67179563_67179814_67179959_67180040_67180667_67181557_67181698_67183261
transcript_68823.known	chr16	-	3550	8	FSM	ENSG00000196123.13	ENST00000290881.11	3550	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	27.3585415532036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGGCCTTTG	6143	False	NA	-7	True	ATTAAA	-12	NA	67184040	67175603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67176976_67178009_67178108_67178198_67178505_67179429_67179563_67179814_67179959_67180040_67180667_67181605_67181698_67183261
transcript_68831.nic	chr16	-	4469	7	NIC	ENSG00000196123.13	novel	3500	8	NA	NA	-23	0	intron_retention	TRUE	canonical	3	20	junction_5	24.3356163312586	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGGCCTTTG	-15	True	NA	-7	True	ATTAAA	-12	NA	67183986	67175603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67176976_67178009_67178108_67178198_67179563_67179814_67179959_67180040_67180667_67181557_67181698_67183261
transcript_68832.nic	chr16	-	4421	7	NIC	ENSG00000196123.13	novel	3550	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	18	junction_5	24.8439574589521	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGGCCTTTG	-15	True	NA	-7	True	ATTAAA	-12	NA	67183986	67175603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67176976_67178009_67178108_67178198_67179563_67179814_67179959_67180040_67180667_67181605_67181698_67183261
transcript_68835.nic	chr16	-	3548	7	NIC	ENSG00000196123.13	novel	3550	8	NA	NA	-23	173	intron_retention	FALSE	canonical	3	18	junction_5	24.8439574589521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGGCTTTGGTTGTCC	-15	True	NA	-9	True	AATAGA	-15	NA	67183986	67176476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67176976_67178009_67178108_67178198_67179563_67179814_67179959_67180040_67180667_67181605_67181698_67183261
transcript_68842.known	chr16	+	1394	4	FSM	ENSG00000140939.14	ENST00000268605.11	1394	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.35412613473634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	5709	False	NA	23	True	AATATA	-30	NA	67170496	67175735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67170575_67174161_67174465_67174620_67174945_67175046
transcript_68846.known	chr16	-	836	3	FSM	ENSG00000196123.13	ENST00000563831.2	836	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATAGGCCCCTAGAAC	-11	True	NA	-45	True	NA	NA	NA	67183586	67176770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67176976_67178198_67178505_67183261
transcript_68847.known	chr16	+	1511	3	FSM	ENSG00000140939.14	ENST00000568503.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCTCTATACATATTATA	2	True	NA	-31	True	NA	NA	NA	67173953	67175681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67174047_67174161_67174945_67175046
transcript_68848.known	chr16	+	1351	4	FSM	ENSG00000140939.14	ENST00000568146.1	1351	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	18	False	NA	23	True	AATATA	-30	NA	67174001	67175735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67174047_67174161_67174455_67174620_67174945_67175046
transcript_68849.known	chr16	-	2429	14	FSM	ENSG00000179044.16	ENST00000314586.11	2429	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.70217970311543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGAGTCTGTGTGTGTT	-15	True	NA	0	True	AATAAA	-15	NA	67190136	67184378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67184605_67184685_67184811_67184901_67185058_67185135_67185259_67185360_67185491_67186236_67186348_67186556_67186658_67186758_67186885_67187020_67187139_67187224_67187838_67188720_67188941_67189019_67189181_67189630_67189684_67189970
transcript_68853.nic	chr16	-	2553	13	NIC	ENSG00000179044.16	novel	2429	14	NA	NA	3	0	intron_retention	FALSE	canonical	1	5	junction_4	2.17785572422866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGAGTCTGTGTGTGTT	14	False	NA	0	True	AATAAA	-15	NA	67190169	67184378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67184605_67184685_67185058_67185135_67185259_67185360_67185491_67186236_67186348_67186556_67186658_67186758_67186885_67187020_67187139_67187224_67187838_67188720_67188941_67189019_67189181_67189630_67189684_67189970
transcript_68861.known	chr16	+	2110	10	FSM	ENSG00000205250.9	ENST00000379378.8	2110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	308.225066076763	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATGTGGTTCTTTGG	-16	True	NA	21	True	AATAAA	-18	NA	67192154	67198918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67192363_67192760_67192871_67193008_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_68871.nic	chr16	+	2268	9	NIC	ENSG00000205250.9	novel	2110	10	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_2	326.695576952	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGATGTGGTTCTTTG	-37	True	NA	20	True	AATAAA	-17	NA	67192133	67198917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67192363_67192760_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_6889.known	chr1	-	748	6	FSM	ENSG00000121900.19	ENST00000474144.5	748	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	55.1746318519662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGATTCCTGGAGCT	16	True	NA	NA	False	NA	NA	NA	32901352	32894740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895645_32895909_32895970_32898125_32898320_32901222
transcript_68890.known	chr16	+	2615	8	FSM	ENSG00000205250.9	ENST00000567007.5	2615	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	342.390098559869	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGATGTGGTTCTTTG	14	True	NA	20	True	AATAAA	-17	NA	67192184	67198917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_68891.known	chr16	+	2486	20	FSM	ENSG00000102890.16	ENST00000393997.8	2486	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	11.6006972758244	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGCCAGCTCTGTA	-1	True	NA	9	True	AATAAA	-20	NA	67199130	67204004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67199405_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_68893.nnic	chr16	+	2546	20	NNC	ENSG00000102890.16	novel	2486	20	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.772700734145	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGCCAGCTCTGTA	-13	True	NA	9	True	AATAAA	-20	NA	67199118	67204004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67199453_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_6890.known	chr1	-	1030	6	FSM	ENSG00000121900.19	ENST00000373463.8	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.0445390872963	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTGCATGCAGGGG	-21	True	NA	-1	True	ATTAAA	-17	NA	32901389	32894594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32895909_32895970_32898125_32898320_32901222
transcript_68905.known	chr16	+	2281	19	FSM	ENSG00000102890.16	ENST00000477898.5	2281	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.895831120317	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGAGCCTGTGACAGT	10	False	NA	34	True	AATAAA	-45	NA	67199508	67204029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_68906.known	chr16	-	1468	7	FSM	ENSG00000125122.17	ENST00000637247.1	1468	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.44802681092953	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTGTCTTAAGTTCT	9829	False	NA	NA	False	ATTAAA	-14	NA	67226818	67207139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67207505_67207598_67207774_67207872_67208091_67208311_67208456_67210047_67210323_67223825_67223928_67226629
transcript_68910.known	chr16	+	776	6	FSM	ENSG00000168701.19	ENST00000304800.14	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_4	36.9940535762168	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	-8	True	NA	25	True	AATAAA	-15	NA	67227129	67229278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_68911.known	chr16	+	775	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	232.36522975695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	19	True	NA	25	True	AATAAA	-15	NA	67227156	67229278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
transcript_68912.known	chr16	+	887	6	FSM	ENSG00000168701.19	ENST00000563953.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	233.559414282533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	-18	True	NA	9	True	NA	NA	NA	67227119	67229262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227718_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_68914.known	chr16	+	915	5	FSM	ENSG00000168701.19	ENST00000567193.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	22.3983816379666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTATACTTATACTC	NA	False	NA	-28	True	NA	NA	NA	67227102	67229225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228882_67228975
transcript_68915.known	chr16	+	832	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_4	39.274673773311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	30	True	NA	25	True	AATAAA	-15	NA	67227167	67229278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
transcript_6892.known	chr1	-	768	5	FSM	ENSG00000121900.19	ENST00000475208.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	59.259492910419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTGAGCTGCACCAGC	NA	False	NA	NA	False	NA	NA	NA	32901438	32894845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32898125_32898320_32901222
transcript_68929.known	chr16	+	3708	16	FSM	ENSG00000135740.17	ENST00000299798.16	3708	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	20.0588024456984	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCTTGTGTCCATGT	-14	True	NA	16	True	ATTAAA	-16	NA	67248978	67272191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67249202_67252541_67252845_67255020_67255185_67255392_67255472_67255752_67255931_67256468_67256690_67256910_67257114_67257344_67257435_67257530_67257602_67258317_67258448_67259572_67259662_67259819_67259947_67264351_67264523_67265039_67265107_67266087_67266226_67270737
transcript_68945.nnic	chr16	+	2638	4	NIC	ENSG00000135740.17	novel	3990	15	NA	NA	-414	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	24.8506650928211	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTCTTGTGTCCATG	1530	False	NA	15	True	ATTAAA	-15	NA	67248457	67272190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67249202_67252541_67252845_67266087_67266226_67270737
transcript_68948.known	chr16	-	3813	22	FSM	ENSG00000135723.14	ENST00000258201.9	3813	22	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_11	17.5313130933057	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	2	True	NA	-1	True	AATAAA	-20	NA	67247481	67229388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231187_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_68952.known	chr16	+	6782	21	FSM	ENSG00000196155.13	ENST00000360461.9	6782	21	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.97925497456569	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTGATGGGCACATGC	NA	False	NA	14	True	AATAAA	-17	NA	67277509	67289479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67280544_67280710_67280807_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
transcript_68961.known	chr16	+	4512	22	FSM	ENSG00000196155.13	ENST00000379344.8	4512	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.38228175255645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTGATGGGCACATGCA	-4	True	NA	15	True	AATAAA	-18	NA	67279531	67289480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67279627_67279875_67280544_67280710_67280807_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
transcript_68963.nic	chr16	-	1975	12	NIC	ENSG00000159714.12	novel	2252	12	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	8.76035396847026	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCGCGCTTACTTTCTTAA	NA	False	NA	-1	True	AATAAA	-21	NA	67416526	67394418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67394894_67395001_67395063_67395186_67395222_67395483_67395567_67398211_67398325_67398572_67398732_67398819_67398945_67399354_67399457_67400956_67401133_67406199_67406443_67407766_67407814_67416170
transcript_68966.known	chr16	-	2252	12	FSM	ENSG00000159714.12	ENST00000565726.3	2252	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	6.87311206234029	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCGTGGGGAGGTGGCG	-15	True	NA	NA	False	NA	NA	NA	67416477	67394151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67394894_67395001_67395063_67395186_67395281_67395483_67395567_67398211_67398325_67398572_67398732_67398819_67398945_67399354_67399457_67400956_67401133_67406199_67406443_67407766_67407814_67416170
transcript_68975.known	chr16	-	2047	11	FSM	ENSG00000159714.12	ENST00000348579.6	2047	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	9.17823512446701	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCGCGCTTACTTTCTTAA	-12	True	NA	-1	True	AATAAA	-21	NA	67416474	67394418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67394894_67395001_67395222_67395483_67395567_67398211_67398325_67398572_67398732_67398819_67398945_67399354_67399457_67400956_67401133_67406199_67406443_67407766_67407814_67416170
transcript_68976.nic	chr16	-	2158	11	NIC	ENSG00000159714.12	novel	2047	11	NA	NA	-49	0	intron_retention	FALSE	canonical	3	14	junction_6	7.13091859440283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCGCGCTTACTTTCTTAA	NA	False	NA	-1	True	AATAAA	-21	NA	67416526	67394418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67394894_67395001_67395281_67395483_67395567_67398211_67398325_67398572_67398732_67398819_67398945_67399354_67399457_67400956_67401133_67406199_67406443_67407766_67407814_67416170
transcript_68980.known	chr16	-	1189	5	FSM	ENSG00000159714.12	ENST00000566075.1	1189	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	11.146748404804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGACGTCGCGCTTACTT	58	False	NA	-7	True	AATAAA	-15	NA	67396257	67394424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67394894_67395001_67395063_67395186_67395281_67395483_67395567_67395775
transcript_68984.nic	chr16	-	3246	3	ISM	ENSG00000159714.12	ENST00000348579.6	2047	11	-52	9181	-49	558	5prime_fragment	FALSE	canonical	3	30	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTCAACATGGCGTCA	NA	False	NA	NA	False	AAGAAA	-1	NA	67416526	67403599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_67406443_67407766_67407814_67416170
transcript_68989.nic	chr16	+	1878	5	NIC	ENSG00000176387.7	novel	540	4	NA	NA	-247	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	50.9239629251299	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	602	False	NA	44	True	AATAAA	-25	NA	67430404	67437553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67430780_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_68991.nnic	chr16	+	1743	5	NNC	ENSG00000176387.7	novel	540	4	NA	NA	-227	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	53.0253477122027	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	622	False	NA	44	True	AATAAA	-25	NA	67430424	67437553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67430665_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_68994.nnic	chr16	+	1704	5	NNC	ENSG00000176387.7	novel	1896	5	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.605555238059	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	156	False	NA	44	True	AATAAA	-25	NA	67431278	67437553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67431514_67435627_67435841_67435956_67436143_67436248_67436353_67436587
transcript_68995.known	chr16	+	1896	5	FSM	ENSG00000176387.7	ENST00000326152.6	1896	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	19.3196790863617	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	-2	True	NA	44	True	AATAAA	-25	NA	67431120	67437553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67431514_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_68996.nnic	chr16	+	1825	5	NNC	ENSG00000176387.7	novel	1896	5	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.3975841681184	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	118	False	NA	44	True	AATAAA	-25	NA	67431240	67437553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67431514_67435578_67435841_67435956_67436143_67436248_67436387_67436587
transcript_68997.nnic	chr16	+	1753	5	NNC	ENSG00000176387.7	novel	1896	5	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	55.9754410433719	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	118	False	NA	44	True	AATAAA	-25	NA	67431240	67437553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67431514_67435650_67435841_67435956_67436143_67436248_67436387_67436587
transcript_68998.nic	chr16	+	1863	5	NIC	ENSG00000176387.7	novel	1896	5	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	56.3975841681184	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	126	False	NA	44	True	AATAAA	-25	NA	67431248	67437553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67431514_67435532_67435841_67435956_67436143_67436248_67436387_67436587
transcript_68999.known	chr16	-	1262	9	FSM	ENSG00000159720.13	ENST00000540149.5	1262	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	255.771107389009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCGTGTGTGTGCGTGTG	36	True	NA	NA	False	NA	NA	NA	67481117	67438475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67452237_67452361_67453543_67453716_67480956
transcript_69.known	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	19.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_+_10792_10897_11188_11403
transcript_6900.known	chr1	-	880	8	FSM	ENSG00000004455.17	ENST00000467905.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	535.117991947685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGAAGGGTGGTCAGGG	-1	True	NA	NA	False	NA	NA	NA	33036886	33010754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33010834_33012073_33012123_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_69004.known	chr16	-	1636	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	0	0	0	0	multi-exon	TRUE	canonical	3	507	junction_6	36.284026957394	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCTGTCTCGTTTAG	-4	True	NA	-5	True	AATAAA	-21	NA	67481157	67438018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
transcript_69009.known	chr16	-	905	6	FSM	ENSG00000159720.13	ENST00000565835.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	236.431469986548	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAGGATGGACGAAGA	2467	False	NA	NA	False	GGGGCT	-13	NA	67481079	67438320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67480956
transcript_69013.known	chr16	+	696	2	FSM	ENSG00000270049.4	ENST00000602596.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGCCTGTAGTAG	-4	True	NA	NA	False	AATAAA	-17	NA	67481383	67484669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67481520_67484109
transcript_69016.known	chr16	+	4092	22	FSM	ENSG00000039523.20	ENST00000042381.9	4092	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	11.6801671158796	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCTGGTACACTCCTG	-15	True	NA	13	True	AATAAA	-21	NA	67528828	67546786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67528915_67538423_67538551_67538671_67538825_67538989_67539069_67539727_67539752_67539845_67539900_67540052_67540206_67540299_67540364_67540457_67540502_67540578_67540705_67541429_67541579_67541652_67541783_67541866_67543265_67543347_67543470_67544298_67544432_67544694_67544831_67544955_67545118_67545375_67545535_67545663_67545861_67545948_67546033_67546140_67546232_67546365
transcript_69017.known	chr16	+	3706	12	FSM	ENSG00000102974.16	ENST00000646771.1	3706	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	114.371079393581	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTACAGCTAATAAATC	34	True	NA	-26	True	AATAAA	-39	NA	67562588	67639138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637693
transcript_69019.nic	chr16	+	2218	10	ISM	ENSG00000102974.16	ENST00000264010.10	3814	12	-91	9679	-32	1588	5prime_fragment	FALSE	canonical	3	388	junction_8	32.8242608258805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCGCTCTAAGAAAGAAG	-7	True	NA	NA	False	AGTAAA	-18	NA	67562434	67629498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397
transcript_69020.known	chr16	+	2797	10	FSM	ENSG00000102974.16	ENST00000401394.6	2797	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	135.819415328763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTGCTCCAAAGACTC	18	True	NA	4	True	AATAAA	-13	NA	67562572	67639168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67562725_67571147_67571265_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
transcript_69021.nic	chr16	+	1410	3	ISM	ENSG00000102974.16	ENST00000264010.10	3814	12	-459	27719	-400	137	5prime_fragment	FALSE	canonical	3	443	junction_1	13.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAACTGCGTTATACAG	NA	False	NA	NA	False	AAGAAA	-9	NA	67562066	67611458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67562725_67571147_67571265_67610823
transcript_69022.nic	chr16	+	1466	3	ISM	ENSG00000102974.16	ENST00000264010.10	3814	12	-361	27565	-302	291	5prime_fragment	FALSE	canonical	3	443	junction_1	13.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAACGAGTTTATCCAT	NA	False	NA	NA	False	ATTAAA	-7	NA	67562164	67611612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67562725_67571147_67571265_67610823
transcript_69023.known	chr16	-	798	2	FSM	ENSG00000261386.2	ENST00000605277.1	798	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCCCTGCTTTGCAG	NA	False	NA	1	True	AATAAA	-21	NA	67563958	67549213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67549348_67563294
transcript_69025.known	chr16	-	1408	12	FSM	ENSG00000102977.17	ENST00000602320.1	1408	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	155.449973351159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCATGCGGCAGGAGAG	13	True	NA	-39	True	AATAAA	-3	NA	67660239	67657545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67657685_67657761_67657815_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660037_67660121
transcript_69029.known	chr16	-	2065	12	FSM	ENSG00000102977.17	ENST00000620338.4	2065	12	0	0	0	0	multi-exon	TRUE	canonical	3	349	junction_1	35.5358043166291	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGCCGCCGCCTCTTT	6592	False	NA	-6	True	AATAAA	-36	NA	67660815	67657512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660046_67660121
transcript_6904.known	chr1	-	3597	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	257.267046730306	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	2	True	NA	-10	True	ATTAAA	-16	NA	33036883	33007985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_6905.known	chr1	-	886	7	FSM	ENSG00000004455.17	ENST00000550338.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	542.344498963118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGACTTGGTTATGTTT	29	False	NA	NA	False	NA	NA	NA	33036902	33013206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33031543_33031662_33036735
transcript_69052.known	chr16	-	1858	9	FSM	ENSG00000102977.17	ENST00000602860.5	1858	9	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	40.8516753022443	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTTTTTAATAAAATAAT	10	True	NA	-56	True	NA	NA	NA	67660281	67657562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659614_67659701_67659796_67659902_67660046_67660121
transcript_6906.known	chr1	-	936	6	FSM	ENSG00000004455.17	ENST00000548033.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	474.205862469034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTCAGAACCCCATGG	91	False	NA	NA	False	TTTAAA	-24	NA	33036840	33010477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_6907.known	chr1	-	5970	6	FSM	ENSG00000004455.17	ENST00000672715.1	5970	6	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_3	50.3801548231047	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	2	True	NA	-10	True	ATTAAA	-16	NA	33036883	33007985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_6908.known	chr1	-	5059	5	FSM	ENSG00000004455.17	ENST00000354858.11	5059	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	504.604981644058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGTGAGCTATTGT	NA	False	NA	-17	True	AATAAA	-6	NA	33037004	33008891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_69087.known	chr16	-	997	3	FSM	ENSG00000102977.17	ENST00000602519.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCGGGAGGACCAGGAG	20	True	NA	NA	False	NA	NA	NA	67660232	67659052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67659796_67659902_67660046_67660121
transcript_69088.known	chr16	+	1244	3	FSM	ENSG00000102981.10	ENST00000458121.7	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	37.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	-9	True	NA	12	True	ATTAAA	-18	NA	67660959	67662774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67661102_67661454_67661678_67661895
transcript_69089.nnic	chr16	+	1305	3	NNC	ENSG00000102981.10	novel	1244	3	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	74	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTCATGGTCCTTGTGT	-2	True	NA	8	True	ATTAAA	-14	NA	67660927	67662770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67661102_67661454_67661711_67661895
transcript_6909.known	chr1	-	811	5	FSM	ENSG00000004455.17	ENST00000480134.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	521.980064274489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCGTGTGTGCTACT	8	True	NA	-23	True	ATTAAA	-20	NA	33036877	33013043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
transcript_69090.known	chr16	+	1281	2	FSM	ENSG00000102981.10	ENST00000602727.1	1281	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCAGCCTGGGGAA	180	False	NA	-32	True	NA	NA	NA	67661231	67662730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67661678_67661895
transcript_69094.known	chr16	-	1565	7	FSM	ENSG00000124074.12	ENST00000243878.9	1565	7	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	14.4308696896618	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCCATAAGAGCTTT	-24	True	NA	0	True	ATTAAA	-17	NA	67666750	67662944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936_67664063_67664995_67665169_67666070_67666266_67666357
transcript_691.known	chr1	-	2095	7	FSM	ENSG00000078808.19	ENST00000465727.5	2095	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	273.449213241183	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTTTTGGTCAGCT	8905	False	NA	-24	True	AATATA	-1	NA	1232031	1216930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1217805_1218457_1218634_1218768_1218944_1223243_1223358_1223831_1223969_1228467_1228947_1231891
transcript_69105.known	chr16	-	1353	6	FSM	ENSG00000124074.12	ENST00000602644.5	1353	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.6982489675853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAACATTTTGTACA	-1	True	NA	-25	True	NA	NA	NA	67666727	67662969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67663322_67663419_67663557_67663936_67664063_67664995_67665169_67666070_67666266_67666357
transcript_6911.known	chr1	-	920	5	FSM	ENSG00000004455.17	ENST00000487289.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	529.856289478572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTAGTCCATACCTT	87	False	NA	NA	False	NA	NA	NA	33036844	33019682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33020162_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_69110.known	chr16	+	1314	4	FSM	ENSG00000159761.15	ENST00000445068.1	1314	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	12.5698050899765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	16	True	NA	13	True	AATAAA	-20	NA	67666836	67668757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67667073_67667226_67667526_67667877_67668099_67668199
transcript_69111.known	chr16	+	1266	4	FSM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.9566858950296	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-7	True	NA	11	True	AATAAA	-18	NA	67666813	67668755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668199
transcript_69114.nic	chr16	+	1367	3	ISM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	intron_retention	FALSE	canonical	3	20	junction_1	8	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-7	True	NA	11	True	AATAAA	-18	NA	67666813	67668755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67667073_67667295_67667526_67667877
transcript_69117.nic	chr16	+	1796	2	ISM	ENSG00000159761.15	ENST00000445068.1	1314	4	-31	2	-8	0	intron_retention	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-15	True	NA	11	True	AATAAA	-18	NA	67666805	67668755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67667073_67667226
transcript_69118.known	chr16	+	1719	2	FSM	ENSG00000159761.15	ENST00000459925.1	1719	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	-5	True	NA	13	True	AATAAA	-20	NA	67666815	67668757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67667073_67667295
transcript_69119.nic	chr16	+	1841	2	NIC	ENSG00000159761.15	novel	1266	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-7	True	NA	11	True	AATAAA	-18	NA	67666813	67668755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67668099_67668199
transcript_69121.known	chr16	-	1991	3	FSM	ENSG00000141098.13	ENST00000602377.1	1991	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	49.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATGTGGTTTTTGTTTG	-5	True	NA	-2	True	AATAAA	-20	NA	67719339	67674530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67676054_67685511_67685803_67719162
transcript_69122.known	chr16	-	2018	3	FSM	ENSG00000141098.13	ENST00000268797.12	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	7.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGGCATGTGGTTTTT	18	True	NA	-7	True	AATAAA	-15	NA	67719316	67674535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67676054_67685456_67685803_67719162
transcript_69126.known	chr16	-	5507	2	FSM	ENSG00000141098.13	ENST00000602279.2	5507	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATTCGTTTTGATT	34	False	NA	NA	False	AATAAA	-23	NA	67719300	67680433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67685803_67719162
transcript_69127.known	chr16	-	2951	1	FSM	ENSG00000141098.13	ENST00000602522.1	2951	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCATGTGGTTTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	67677484	67674533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67674500_67677500
transcript_69128.known	chr16	-	2029	3	FSM	ENSG00000141098.13	ENST00000602496.1	2029	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATTGAAGAGATTGAA	10	True	NA	-41	True	AATAAA	-3	NA	67719324	67680748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67681491_67684677_67685803_67719162
transcript_69136.known	chr16	-	5245	14	FSM	ENSG00000141084.12	ENST00000317506.8	5245	14	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	6.21888705581777	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTGTCTGGTCTCT	-7	True	NA	-3	True	ATTAAA	-18	NA	67806560	67723069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728512_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
transcript_69137.known	chr16	-	2374	14	FSM	ENSG00000141084.12	ENST00000602677.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	16.8684432802267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATAGCTTATTATTTTC	-7	True	NA	NA	False	NA	NA	NA	67806560	67726030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728602_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
transcript_69140.nic	chr16	-	2260	13	NIC	ENSG00000141084.12	novel	5245	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	18.2040898945509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAATGAGATTATA	-10	True	NA	NA	False	NA	NA	NA	67806563	67726004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728512_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67805427_67805540_67806301
transcript_69141.nic	chr16	-	2142	13	NIC	ENSG00000141084.12	novel	2232	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	15.5590273903395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAATGAGATTATA	-7	True	NA	NA	False	NA	NA	NA	67806560	67726004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728512_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67772033_67772087_67805427_67805540_67806301
transcript_69142.known	chr16	-	2232	13	FSM	ENSG00000141084.12	ENST00000448631.6	2232	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	21.4726893725236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAATGAGATTATA	-7	True	NA	NA	False	NA	NA	NA	67806560	67726004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728602_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67772033_67772087_67805427_67805540_67806301
transcript_6915.known	chr1	+	2048	11	FSM	ENSG00000142920.17	ENST00000373443.7	2048	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.13209195267316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	10	True	NA	11	True	AATAAA	-26	NA	33081166	33120529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33081295_33081390_33081509_33082177_33082355_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_69164.known	chr16	+	2120	5	FSM	ENSG00000102898.12	ENST00000219169.9	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	464.994892445068	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCTTTCTTCCAA	3	True	NA	14	True	AATAAA	-15	NA	67846932	67872567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_69166.known	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1046.77179342013	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	-18	True	NA	28	True	AATAAA	-29	NA	67847160	67871323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_69168.known	chr16	+	1179	5	FSM	ENSG00000102898.12	ENST00000568396.2	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1127.81403608928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	32	True	NA	28	True	AATAAA	-29	NA	67847210	67871323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67847567_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_69172.known	chr16	+	1876	1	FSM	ENSG00000168286.3	ENST00000303596.3	1876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTCTCGCCATTTTAT	11	True	NA	16	True	ATTAAA	-19	NA	67842319	67844195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67842300_67844200
transcript_69173.known	chr16	-	2133	12	FSM	ENSG00000102901.13	ENST00000565157.5	2133	12	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	52.560708701211	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	0	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_69174.known	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	TRUE	canonical	3	366	junction_4	30.8776958137331	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-16	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
transcript_69175.known	chr16	-	1990	11	FSM	ENSG00000102901.13	ENST00000436104.6	1990	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	160.426805740188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	0	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828560_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831840_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_69176.known	chr16	-	1737	12	FSM	ENSG00000102901.13	ENST00000626059.2	1737	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	130.171088943337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATATTCTGCATTT	1	True	NA	-8	True	AATAAA	-8	NA	67833896	67828164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832454_67832546_67833749
transcript_69184.known	chr16	+	4767	29	FSM	ENSG00000038358.15	ENST00000358933.10	4767	29	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_17	42.155733505028	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTATGTGTGTGCTTTT	-36	True	NA	17	True	AATAAA	-2	NA	67873051	67884499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67873344_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67877657_67877740_67877846_67878165_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67881846_67881953_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883178_67883567_67883732_67883955
transcript_6919.known	chr1	+	1806	8	FSM	ENSG00000142920.17	ENST00000471119.5	1806	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.32115382989599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGAATCTGGCAGTTTGA	-2	True	NA	12	True	AATAAA	-27	NA	33081154	33120530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33081509_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_69190.nic	chr16	+	4885	28	NIC	ENSG00000038358.15	novel	4767	29	NA	NA	-10	0	intron_retention	FALSE	canonical	3	327	junction_17	42.5504783742386	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTATGTGTGTGCTTTT	-46	True	NA	17	True	AATAAA	-2	NA	67873041	67884499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67873344_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67877657_67877740_67877846_67878165_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883178_67883567_67883732_67883955
transcript_6920.known	chr1	+	1986	9	FSM	ENSG00000142920.17	ENST00000481886.5	1986	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.07967124868873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	-9	True	NA	11	True	AATAAA	-26	NA	33081147	33120529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33081509_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_6922.nic	chr1	-	3285	6	NIC	ENSG00000116525.14	novel	3817	5	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	21.1697897958388	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	-6	True	NA	-1	True	ATTAAA	-22	NA	33182083	33145398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024_33181422_33181993
transcript_6925.known	chr1	-	3817	5	FSM	ENSG00000116525.14	ENST00000291416.10	3817	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	7.42882897905181	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	6	True	NA	-1	True	ATTAAA	-22	NA	33182043	33145398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024
transcript_69250.known	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	15.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	-8	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67884983_67885721_67885855_67885973
transcript_69254.known	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	269.826853022906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-13	True	NA	-4	True	AATAAA	-20	NA	67936850	67934505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
transcript_69259.nnic	chr16	+	3412	4	NNC	ENSG00000159792.10	novel	3497	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.055518860985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGCTTCTTGCTGT	8329	False	NA	34	True	AGTAAA	-39	NA	67893221	67929676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67893372_67908679_67909707_67927324_67929368_67929484
transcript_69260.known	chr16	+	3497	3	FSM	ENSG00000159792.10	ENST00000291041.6	3497	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGCTTCTTGCTGT	-7	True	NA	34	True	AGTAAA	-39	NA	67893253	67929676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67893372_67908679_67909707_67927324
transcript_69261.nic	chr16	-	612	3	ISM	ENSG00000205220.12	ENST00000570985.1	591	4	82	0	82	0	intron_retention	FALSE	canonical	3	545	junction_2	36	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-33	True	NA	-4	True	AATAAA	-20	NA	67935713	67934505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_67934672_67934796_67934949_67935419
transcript_69262.known	chr16	-	591	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	42.4604391038163	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-15	True	NA	-4	True	AATAAA	-20	NA	67935795	67934505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
transcript_69272.known	chr16	-	3627	24	FSM	ENSG00000124067.17	ENST00000541864.6	3627	24	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_23	39.9961718394992	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGGTAGCCAGGGA	2745	False	NA	NA	False	NA	NA	NA	67966878	67944481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
transcript_69273.known	chr16	-	4708	24	FSM	ENSG00000124067.17	ENST00000316341.8	4708	24	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_12	17.3441752723794	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTCTGCAGAGGCAG	-15	True	NA	NA	False	AATAAA	-17	NA	67968637	67943473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_69284.known	chr16	-	3620	23	FSM	ENSG00000124067.17	ENST00000572037.5	3620	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_22	41.6251473578411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGGGCCCCCCACCAAG	1039	False	NA	-94	True	NA	NA	NA	67968584	67944413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67968438
transcript_69289.known	chr16	-	3761	23	FSM	ENSG00000124067.17	ENST00000570802.5	3761	23	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_11	17.6623519862432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAGGGAAGGGTAGCCAG	1070	False	NA	NA	False	NA	NA	NA	67968553	67944484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67944932_67945086_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_6930.nic	chr1	-	1686	2	ISM	ENSG00000116525.14	ENST00000485148.1	806	4	-46	5264	-40	-5264	intron_retention	FALSE	canonical	3	62	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATATAGCCAGGCGTAG	NA	False	NA	NA	False	AATATA	-36	NA	33182099	33164955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_33165567_33181024
transcript_6931.known	chr1	+	3187	9	FSM	ENSG00000160094.15	ENST00000539719.6	3187	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	36.6092116140187	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGTGGTGTTTGGCGT	-34	True	NA	17	True	AATAAA	-17	NA	33256491	33300719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33256655_33270486_33270613_33276099_33276164_33276347_33276595_33280123_33280458_33281586_33281812_33294936_33295016_33295146_33295306_33298929
transcript_69312.known	chr16	-	673	5	FSM	ENSG00000124067.17	ENST00000576462.1	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	14.972892172189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGGGCA	1154	False	NA	NA	False	TATAAA	-11	NA	67968469	67957528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_69313.nnic	chr16	-	1630	10	NNC	ENSG00000141096.6	novel	1737	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.7052386186003	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	-6	True	NA	-12	True	AATAAA	-15	NA	67980508	67975663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_67976002_67976092_67976163_67976699_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_69314.nnic	chr16	-	1646	10	NNC	ENSG00000141096.6	novel	1737	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	26.4952825989835	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	6	True	NA	-12	True	AATAAA	-15	NA	67980496	67975663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_67976002_67976092_67976191_67976699_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_69315.known	chr16	-	1737	10	FSM	ENSG00000141096.6	ENST00000672962.1	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	10.3076143496081	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	67980549	67975663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67976002_67976092_67976229_67976699_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_69323.nic	chr16	-	2663	8	NIC	ENSG00000141096.6	novel	1737	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	78	junction_2	5.71785602748271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	-8	True	NA	-12	True	AATAAA	-15	NA	67980510	67975663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67976002_67976092_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_69326.known	chr16	+	6144	11	FSM	ENSG00000072736.19	ENST00000329524.8	6144	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	45.734122928072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAATCTGTCTGAGTGT	100	False	NA	12	True	AATAAA	-20	NA	68085657	68229259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68214328_68214433_68226349
transcript_69327.known	chr16	+	6328	11	FSM	ENSG00000072736.19	ENST00000349223.9	6328	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	42.6895771822584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTAATCTGTCTGAGTG	16	True	NA	11	True	AATAAA	-19	NA	68085457	68229258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68221195_68221285_68226349
transcript_69328.known	chr16	+	6328	10	FSM	ENSG00000072736.19	ENST00000346183.8	6328	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	19.2398762861452	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAATCTGTCTGAGTGT	1	True	NA	12	True	AATAAA	-20	NA	68085369	68229259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68226349
transcript_69330.known	chr16	+	3583	9	FSM	ENSG00000072736.19	ENST00000379165.8	3583	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	19.8364405829272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	100	False	NA	NA	False	NA	NA	NA	68085657	68192228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767
transcript_69340.known	chr16	+	1982	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	19.5095129039656	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-6	True	NA	13	True	CATAAA	-1	NA	68023283	68079320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_69345.known	chr16	+	1933	16	FSM	ENSG00000167264.18	ENST00000358896.10	1933	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	25.3820584052769	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-9	True	NA	13	True	CATAAA	-1	NA	68023252	68079320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68023352_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_6935.known	chr1	-	1466	8	FSM	ENSG00000134686.20	ENST00000467894.5	1466	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.0138756256905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGGAGGGGCAGAGAG	17	False	NA	NA	False	NA	NA	NA	33349884	33324688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33331624_33331700_33332274_33332405_33334184_33334293_33349596
transcript_69355.known	chr16	-	2317	1	FSM	ENSG00000182810.7	ENST00000332395.7	2317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATATAGCATTTTCTT	-10	True	NA	NA	False	ATTAAA	-23	NA	68023232	68020915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68020900_68023200
transcript_69357.known	chr16	-	3429	15	FSM	ENSG00000103067.14	ENST00000473183.7	3429	15	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_9	15.289885946105	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCCTTAAAGATCCAT	-15	True	NA	1	True	TATAAA	-25	NA	68236127	68229032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68230316_68230388_68230555_68230840_68231028_68231177_68231377_68231481_68231695_68231801_68232104_68232245_68232289_68232370_68232504_68232576_68232688_68232760_68232816_68233326_68233426_68233767_68233883_68233993_68234108_68235633_68235763_68235847
transcript_69358.known	chr16	-	3386	15	FSM	ENSG00000103067.14	ENST00000565858.5	3386	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	58.9775121446769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTGTAAACATAACTGAG	-20	True	NA	-18	True	CATAAA	-42	NA	68236132	68229110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68230316_68230388_68230555_68230840_68231028_68231177_68231377_68231481_68231695_68231801_68232104_68232245_68232289_68232370_68232504_68232576_68232718_68232760_68232816_68233326_68233426_68233767_68233883_68233993_68234108_68235633_68235763_68235847
transcript_6936.known	chr1	-	2550	7	FSM	ENSG00000134686.20	ENST00000373418.7	2550	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	21.6442191409675	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGGTGCCTTTCTCC	16	False	NA	-7	True	AATAAA	-14	NA	33349885	33323625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334089_33334293_33349596
transcript_6937.nic	chr1	-	2363	7	NIC	ENSG00000134686.20	novel	2548	8	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_5	26.5706605111728	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGGTGCCTTTCTCC	-11	True	NA	-7	True	AATAAA	-14	NA	33349793	33323625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334184_33334293_33349596
transcript_69392.known	chr16	+	929	6	FSM	ENSG00000103066.13	ENST00000568082.1	929	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	25.8658075458703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGGTGTTCGTGCAGAC	12	True	NA	NA	False	NA	NA	NA	68245391	68259252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255705_68255991_68259145
transcript_69393.known	chr16	+	2694	6	FSM	ENSG00000103066.13	ENST00000219345.10	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	9.23904756996088	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCTGGCCTACATTCT	-7	True	NA	19	True	AATAAA	-20	NA	68245372	68261058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255765_68255991_68259145
transcript_69394.known	chr16	+	1203	6	FSM	ENSG00000103066.13	ENST00000566188.5	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	22.4374686629308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTGTTGGCCTCTGG	-7	True	NA	NA	False	NA	NA	NA	68245372	68259692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255890_68255991_68259145
transcript_6940.known	chr1	+	4316	8	FSM	ENSG00000121903.15	ENST00000361328.7	4316	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.69030850945703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGCCTAAGTAATTTTTC	-6	True	NA	NA	False	NA	NA	NA	33472644	33496507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33472688_33479178_33479706_33488464_33488652_33489114_33489192_33489517_33489603_33491024_33491703_33493186_33493616_33494217
transcript_69401.known	chr16	+	6308	12	FSM	ENSG00000103064.15	ENST00000566454.5	6308	12	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	42.2941294795123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	29	False	NA	6	True	AATAAA	-16	NA	68264559	68301819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_69404.known	chr16	+	6255	11	FSM	ENSG00000103064.15	ENST00000219343.11	6255	11	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	25.5765517613301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	-5	True	NA	6	True	AATAAA	-16	NA	68264525	68301819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_6941.known	chr1	+	9456	8	FSM	ENSG00000121903.15	ENST00000684572.1	9456	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.1780301787479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTTTTCGATTCTT	-6	True	NA	NA	False	AATAAA	-22	NA	33472644	33501643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33472692_33479178_33479706_33488464_33488652_33489114_33489192_33489517_33489603_33491024_33491703_33493186_33493616_33494217
transcript_69411.known	chr16	-	4191	5	FSM	ENSG00000103061.13	ENST00000263997.11	4191	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	5.59016994374947	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAGGTAAGACTCAA	-5	True	NA	NA	False	AGTAAA	-18	NA	68310946	68298033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68301406_68302380_68302502_68304025_68304233_68310334_68310614_68310734
transcript_69415.nic	chr16	-	2194	4	NIC	ENSG00000103061.13	novel	4191	5	NA	NA	-22	972	intron_retention	FALSE	canonical	3	100	junction_1	5.71547606649408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTGAAAAAAGGAAGGTTT	NA	False	NA	NA	False	AAGAAA	-7	NA	68310968	68301027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_68302502_68304025_68304233_68310334_68310614_68310734
transcript_69418.known	chr16	-	910	3	FSM	ENSG00000103061.13	ENST00000568538.2	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTGACAACAAAATCT	119	False	NA	NA	False	GATAAA	-25	NA	68310822	68303689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68304233_68310334_68310614_68310734
transcript_69424.known	chr16	+	3753	20	FSM	ENSG00000132600.18	ENST00000675132.1	3753	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	96.7059970296354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCATGAAGATACAATAC	-3	True	NA	-52	True	NA	NA	NA	68311018	68358524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356140_68356216_68356700_68356798_68357053
transcript_69430.known	chr16	+	3738	19	FSM	ENSG00000132600.18	ENST00000441236.3	3738	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	68.3258577663404	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAATCTCAGCAAGTT	-3	True	NA	8	True	ATTAAA	-19	NA	68311018	68358584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_69436.known	chr16	+	4238	19	FSM	ENSG00000132600.18	ENST00000339507.9	4238	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	76.8349401294187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAATTAAAAAAGTTT	2	True	NA	-23	True	AATACA	-9	NA	68311133	68358553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_69448.nic	chr16	+	2297	18	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	59.827433500928	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-22	True	NA	13	True	AATAAA	-18	NA	68310999	68357259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_6946.nic	chr1	-	3173	13	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	-156	257533	-156	577	5prime_fragment	FALSE	canonical	2	11	junction_11	8.37655458208604	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTGATGACTTTTGAG	-5	False	NA	-11	True	AATGAA	-27	NA	34165386	33771530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
transcript_69461.known	chr16	+	2091	17	FSM	ENSG00000132600.18	ENST00000449359.7	2091	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	85.8850066949989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	34	True	NA	13	True	AATAAA	-18	NA	68311055	68357259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_69467.nic	chr16	+	2216	16	FSM	ENSG00000132600.18	ENST00000691961.1	3416	16	-34	1234	1	0	multi-exon	FALSE	canonical	3	56	junction_11	83.7008960525513	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-28	True	NA	13	True	AATAAA	-18	NA	68310993	68357259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_6947.nic	chr1	-	2608	13	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	-40	257982	-40	128	5prime_fragment	FALSE	canonical	2	11	junction_11	8.37655458208604	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGATGACCTGACCAT	111	False	NA	NA	False	NA	NA	NA	34165270	33771979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
transcript_69471.nnic	chr16	+	2165	16	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	83.7878272781912	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-22	True	NA	13	True	AATAAA	-18	NA	68310999	68357259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_69487.nic	chr16	+	2075	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	76.0214792418725	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-22	True	NA	13	True	AATAAA	-18	NA	68310999	68357259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_69510.known	chr16	-	5271	9	FSM	ENSG00000103056.12	ENST00000219334.10	5271	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.31695671910659	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGTGTTCTCCACTTAT	-6	True	NA	-1	True	AATAAA	-15	NA	68448508	68358326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68361308_68361602_68361760_68363495_68363560_68363776_68363867_68364750_68364907_68365016_68365093_68370858_68372388_68386597_68386660_68448352
transcript_6952.nnic	chr1	+	2229	8	NNC	ENSG00000142698.15	novel	3050	7	NA	NA	110	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	13.6695699587494	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	0	True	NA	8	True	GATAAA	-19	NA	34166992	34219131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_34167172_34177906_34178110_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_69521.known	chr16	+	648	5	FSM	ENSG00000184939.16	ENST00000576805.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.6659604392971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACTCCTGGGATGTTA	20	True	NA	NA	False	NA	NA	NA	68539322	68563137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539488_68539757_68539826_68557997_68558125_68558374_68558569_68563043
transcript_69522.known	chr16	+	543	5	FSM	ENSG00000184939.16	ENST00000573685.5	543	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	22.7596133534821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCCCACTGCACACATG	-12	True	NA	NA	False	NA	NA	NA	68539290	68563098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539488_68539757_68539826_68557997_68558125_68558472_68558569_68563043
transcript_69525.known	chr16	+	4664	5	FSM	ENSG00000184939.16	ENST00000564558.5	4664	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	16.5151445649137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTTGTCGTTTTCAA	-6	True	NA	9	True	AATAAA	-22	NA	68539296	68567135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539480_68539757_68539826_68557997_68558125_68558374_68558569_68563043
transcript_69526.known	chr16	+	4568	5	FSM	ENSG00000184939.16	ENST00000563169.7	4568	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	18.1383571472171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTCAGTTTGTCGTTT	-12	True	NA	5	True	AATAAA	-18	NA	68539290	68567131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539480_68539757_68539826_68557997_68558125_68558472_68558569_68563043
transcript_69529.known	chr16	+	695	5	FSM	ENSG00000184939.16	ENST00000611381.4	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	19.5751756058534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	13	True	NA	NA	False	NA	NA	NA	68539315	68576040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539470_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_6953.known	chr1	+	2136	7	FSM	ENSG00000142698.15	ENST00000373374.7	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	4.74926894959167	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	NA	False	NA	8	True	GATAAA	-19	NA	34166882	34219131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_34167172_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_69530.known	chr16	+	199	2	FSM	ENSG00000184939.16	ENST00000573161.1	199	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGTGTTTTTCTTTTGC	47	False	NA	23	True	AATAAA	-37	NA	68539794	68555240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539826_68555072
transcript_69551.known	chr16	+	3611	16	FSM	ENSG00000062038.15	ENST00000429102.6	3611	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_15	221.02900764882	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGCCTGGGGAGTGAA	1	True	NA	13	True	ATTAAA	-13	NA	68644992	68699036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698092
transcript_69552.known	chr16	+	4452	16	FSM	ENSG00000062038.15	ENST00000264012.9	4452	16	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_13	87.5992389616866	1860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTAATTCTGTAAAG	-11	True	NA	5	True	AATAAA	-16	NA	68645309	68700292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_6956.known	chr1	-	897	2	FSM	ENSG00000163866.9	ENST00000423898.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGGGATACCTGCA	7912	False	NA	-77	True	NA	NA	NA	34859717	34855348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34855983_34859454
transcript_69568.known	chr16	+	2746	15	FSM	ENSG00000062038.15	ENST00000542274.5	2746	15	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	218.891688806522	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTGGGCCTGCTGT	-20	True	NA	NA	False	NA	NA	NA	68645300	68698692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68645425_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_6957.known	chr1	-	5694	2	FSM	ENSG00000163866.9	ENST00000521580.3	5694	2	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTTAATCAGATCCT	13	True	NA	-2	True	ATTAAA	-15	NA	34859749	34850361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34855983_34859676
transcript_69591.known	chr16	-	1682	2	FSM	ENSG00000260577.2	ENST00000562172.2	1682	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTTGAAATTGGTCTG	21	False	NA	-4	True	AATAAA	-19	NA	68646168	68644247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68645741_68645979
transcript_69597.known	chr16	+	4811	16	FSM	ENSG00000039068.20	ENST00000261769.10	4811	16	0	0	0	0	multi-exon	TRUE	canonical	3	929	junction_13	60.7550272268339	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAAATTTGTTTTA	0	True	NA	17	True	ATTAAA	-14	NA	68737291	68835537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68819279_68819426_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
transcript_6960.known	chr1	+	1355	2	FSM	ENSG00000189280.3	ENST00000338513.1	1355	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTGCCCTCTGGTTGT	-18	True	NA	8	True	AATAAA	-20	NA	34755046	34758512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_34755196_34757306
transcript_69605.known	chr16	+	4138	15	FSM	ENSG00000039068.20	ENST00000566612.5	4138	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	272.948049553577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTTTGATGATGTC	20	False	NA	NA	False	NA	NA	NA	68737311	68835030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
transcript_6961.known	chr1	+	2192	2	FSM	ENSG00000188910.8	ENST00000373366.3	2192	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTGGCTCTGTCTCTGG	2	True	NA	3	True	AATAAA	-15	NA	34781213	34786364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_34781779_34784737
transcript_69616.known	chr16	+	4893	18	FSM	ENSG00000103047.8	ENST00000261778.2	4893	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_14	10.7648666011789	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACTCCACGCAACCCAC	-5	True	NA	21	True	AATAAA	-28	NA	68843530	69085182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68843712_68859883_68860525_68862944_68863062_68867078_68867221_68875153_68875291_68878117_68878281_68880547_68880631_68900433_68900547_68902327_68902505_68907442_68907576_68909210_68909403_68919084_68919220_68927567_68928084_68930237_68930296_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_69619.known	chr16	+	1764	4	FSM	ENSG00000103047.8	ENST00000564180.1	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.84573486395988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAAT	-2	True	NA	NA	False	NA	NA	NA	68843603	68867976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68843712_68859883_68860525_68862944_68863062_68867078
transcript_6962.known	chr1	+	1797	2	FSM	ENSG00000188910.8	ENST00000373362.3	1797	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCTGTCTCTGGTTCTC	-2	True	NA	8	True	AATAAA	-20	NA	34782277	34786369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_34782443_34784737
transcript_69620.known	chr16	+	9789	7	FSM	ENSG00000168807.17	ENST00000336278.9	9754	7	-35	0	-18	0	multi-exon	FALSE	canonical	3	50	junction_6	7.22072634081149	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTTGTTTTTTTTTTC	-29	True	NA	NA	False	AATAAA	-17	NA	69187128	69309052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69187747_69245601_69245816_69260049_69260261_69270142_69270286_69284047_69284245_69299589_69299775_69300831
transcript_69628.known	chr16	+	2186	17	FSM	ENSG00000141076.18	ENST00000562237.5	2186	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	194.896276500476	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	-30	True	NA	NA	False	AATAAA	-15	NA	69132595	69169020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69132690_69133511_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_6963.known	chr1	-	3921	12	FSM	ENSG00000116544.12	ENST00000373347.6	3921	12	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_10	38.1367699620785	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGCCAGCTGCTCTCTC	-30	True	NA	-23	True	AATAAA	-15	NA	34929650	34865435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34866302_34867047_34867192_34867535_34867628_34868604_34869090_34884977_34885064_34885477_34885792_34886071_34886286_34899668_34899742_34900067_34900274_34904276_34905435_34907354_34907438_34929450
transcript_69635.nnic	chr16	+	2117	17	NNC	ENSG00000141076.18	novel	2188	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	23	junction_16	214.357032774761	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	-29	True	NA	NA	False	AATAAA	-16	NA	69132596	69169021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167124_69168881
transcript_69636.known	chr16	+	2188	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	72.6858609015536	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	23	True	NA	NA	False	AATAAA	-16	NA	69132648	69169021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_6965.known	chr1	-	922	3	FSM	ENSG00000243749.1	ENST00000373337.3	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	5.5	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTCTCTTTTGCCTC	NA	False	NA	-9	True	TATAAA	-12	NA	34985353	34981534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34982120_34983766_34983948_34985197
transcript_69654.known	chr16	+	1841	14	FSM	ENSG00000141076.18	ENST00000352319.8	1841	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	240.250953609053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	24	True	NA	NA	False	AATAAA	-15	NA	69132649	69169020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_69663.known	chr16	+	4191	4	FSM	ENSG00000103044.11	ENST00000569188.6	4191	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	13.735598518691	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	-9	True	NA	13	True	AATAAA	-22	NA	69105652	69117660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69105788_69109395_69110032_69113440_69113543_69114342
transcript_69664.nic	chr16	+	4587	4	NIC	ENSG00000103044.11	novel	4191	4	NA	NA	133	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	16.0485374896143	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	66	False	NA	13	True	AATAAA	-22	NA	69105785	69117660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_69106317_69109395_69110032_69113440_69113543_69114342
transcript_69667.known	chr16	+	4220	4	FSM	ENSG00000103044.11	ENST00000306560.1	4220	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.1712593442672	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTACTTTGTATTTAATG	15	False	NA	21	True	AATAAA	-30	NA	69107539	69117668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69107696_69109395_69110032_69113440_69113543_69114342
transcript_6967.known	chr1	-	3163	2	FSM	ENSG00000284773.1	ENST00000417456.1	3163	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGTCAAAGAATATCTG	10	True	NA	NA	False	AATAAA	-16	NA	34985313	34974355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34977403_34985197
transcript_69674.known	chr16	-	1073	4	FSM	ENSG00000168802.14	ENST00000398235.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	139.207279503145	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGACCAAACCCCAATCT	1	True	NA	NA	False	NA	NA	NA	69132146	69119810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132088
transcript_69675.known	chr16	-	2921	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_2	72.8941393772885	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-12	True	NA	-10	True	AATAAA	-15	NA	69132588	69118009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
transcript_6968.known	chr1	+	3055	11	FSM	ENSG00000197056.11	ENST00000488455.5	3055	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	50.1163645928154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAGAAAAATTCAG	-8	True	NA	NA	False	TTTAAA	-20	NA	35079385	35114636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111775_35111913_35112086_35112131_35112976
transcript_69681.known	chr16	-	863	3	FSM	ENSG00000168802.14	ENST00000522091.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	85.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATTATCACCAGCGT	-2	True	NA	NA	False	NA	NA	NA	69132578	69120460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69121171_69121435_69121494_69132483
transcript_69685.known	chr16	-	831	3	FSM	ENSG00000168802.14	ENST00000522497.1	831	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	266	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCAGGCCCAGGGCC	3	True	NA	NA	False	NA	NA	NA	69132573	69120026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121052_69121171_69132483
transcript_69687.known	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	56.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-4	True	NA	-10	True	AATAAA	-15	NA	69132151	69118009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121435_69121494_69132088
transcript_69688.nic	chr16	-	2827	3	FSM	ENSG00000286140.2	ENST00000519520.7	2803	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	338	junction_1	133	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	63	False	NA	-10	True	AATAAA	-15	NA	69132612	69118009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121435_69121494_69132483
transcript_69692.known	chr16	-	734	2	FSM	ENSG00000168802.14	ENST00000567763.1	734	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAACCCCAGGTTAGGG	4	True	NA	NA	False	GGGGCT	-20	NA	69132572	69120004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69132483
transcript_69694.known	chr16	+	1163	4	FSM	ENSG00000103044.11	ENST00000219322.7	1163	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.5318181259127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTCATTTGAACTTGA	35	False	NA	NA	False	AAGAAA	-16	NA	69106256	69118719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69106317_69109395_69110032_69113440_69113543_69118354
transcript_69707.known	chr16	+	4106	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_8	32.9698346977961	2221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	-25	True	NA	NA	False	AATAAA	-19	NA	69311349	69326939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
transcript_6972.known	chr1	+	4161	10	FSM	ENSG00000197056.11	ENST00000359858.9	4161	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	27.8744982792693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATCTTTCCTAATC	-9	True	NA	16	True	ATTAAA	-21	NA	35079384	35115859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_69725.known	chr16	-	2996	10	FSM	ENSG00000132604.11	ENST00000254942.8	2996	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	60.8221450898711	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAGTAGCTGTTTAATT	-11	True	NA	-4	True	ATTAAA	-17	NA	69386007	69355566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69357057_69357517_69357562_69361403_69361490_69366806_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
transcript_6974.nic	chr1	+	817	6	ISM	ENSG00000197056.11	ENST00000488455.5	3055	11	-36	10233	-32	6809	5prime_fragment	FALSE	canonical	3	12	junction_1	52.50752327048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	NA	False	NA	NA	False	AAAAAG	-5	NA	35079349	35104403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_69751.known	chr16	-	4629	6	FSM	ENSG00000213380.16	ENST00000306875.10	4629	6	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	68.4496895537153	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTGAAGCTCTGCAGA	0	True	NA	NA	False	AGTAAA	-39	NA	69339564	69326427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69329180_69330812_69331096_69332713_69332883_69334520_69335349_69336504_69336713_69339175
transcript_69760.known	chr16	+	2055	5	FSM	ENSG00000132603.15	ENST00000254940.10	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	28.9946115683587	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGATTGTGGCCTT	-12	True	NA	19	True	AATAAA	-30	NA	69339771	69343106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341179_69341321_69341532
transcript_69779.known	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	204.43798298968	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	13	True	NA	17	True	AATAAA	-28	NA	69339796	69343104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
transcript_6978.nic	chr1	+	690	5	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	-30	11456	-27	6809	5prime_fragment	FALSE	canonical	3	52	junction_1	39.0576496988746	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	NA	False	NA	NA	False	AAAAAG	-5	NA	35079354	35104403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_69781.known	chr16	-	2262	4	FSM	ENSG00000213380.16	ENST00000562595.5	2262	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	156.034896381831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGGGTATGTCTTTATC	423	False	NA	-3	True	ATTAAA	-17	NA	69339493	69321990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69323704_69335325_69335349_69336504_69336713_69339175
transcript_69788.known	chr16	-	1731	4	FSM	ENSG00000213380.16	ENST00000562081.2	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	19.3275853524323	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATCACTCCAAAAAGATC	333	False	NA	-11	True	AGTAAA	-24	NA	69339583	69332595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69332883_69334520_69335349_69336504_69336713_69339175
transcript_6979.known	chr1	+	508	4	FSM	ENSG00000197056.11	ENST00000466390.5	508	4	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_2	65.6878138537803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCTACCTTGTTCTT	-12	True	NA	NA	False	NA	NA	NA	35079381	35097594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35079443_35093913_35094010_35095818_35095892_35097316
transcript_69806.known	chr16	-	2859	2	FSM	ENSG00000258429.2	ENST00000288022.2	2859	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGTAAAATCTCTCCC	0	True	NA	NA	False	AATAAA	-18	NA	69330588	69326912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69329180_69329996
transcript_69811.known	chr16	+	4262	5	FSM	ENSG00000103018.18	ENST00000307892.13	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	32.889017923921	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	0	True	NA	25	True	AATAAA	-18	NA	69424618	69466264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462429
transcript_69812.known	chr16	+	648	4	FSM	ENSG00000103018.18	ENST00000686167.1	2493	4	231	1614	169	-1614	multi-exon	FALSE	canonical	3	950	junction_2	36.9353790047188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGTTTATTTACAATA	193	False	NA	NA	False	NA	NA	NA	69424848	69459572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092
transcript_69814.known	chr16	+	2492	3	FSM	ENSG00000103018.18	ENST00000514123.5	2492	3	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAAAACTATTGAGC	0	True	NA	NA	False	NA	NA	NA	69424618	69450238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69424858_69447149_69447279_69448114
transcript_69816.known	chr16	+	13067	15	FSM	ENSG00000102908.22	ENST00000393742.7	13067	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	8.16288264409237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTCTTTTTTTTCCTC	49	False	NA	17	True	AATAAA	-29	NA	69566207	69704666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69566375_69626402_69626529_69646516_69646579_69647027_69647587_69653235_69653429_69655608_69655800_69659726_69659900_69669976_69670112_69670235_69670289_69677202_69677336_69684886_69684971_69690939_69691089_69691748_69694240_69695135_69695380_69696359
transcript_69819.known	chr16	+	13229	14	FSM	ENSG00000102908.22	ENST00000354436.6	13229	14	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	8.17486405800512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTCTTTTTTTTCCTC	13	False	NA	17	True	AATAAA	-29	NA	69565983	69704666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69566375_69626402_69626529_69647027_69647587_69653235_69653429_69655608_69655800_69659726_69659900_69669976_69670112_69670235_69670289_69677202_69677336_69684886_69684971_69690939_69691089_69691748_69694240_69695135_69695380_69696359
transcript_69822.known	chr16	+	1725	6	FSM	ENSG00000102908.22	ENST00000565301.2	1725	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.6381816969859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGAACGGTGCTGTTC	26	False	NA	NA	False	NA	NA	NA	69566344	69697390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69566375_69626402_69626529_69647027_69647168_69694085_69694240_69695135_69695380_69696359
transcript_69825.known	chr16	-	2521	6	FSM	ENSG00000181019.13	ENST00000320623.10	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_2	37.0599514300815	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	1	True	NA	-3	True	AATAAA	-26	NA	69726560	69709400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69711282_69713027_69713130_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_69828.known	chr16	-	1105	5	FSM	ENSG00000181019.13	ENST00000379046.6	1105	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	158.62435973078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTCTTTAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	69726584	69710726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69711282_69713027_69713130_69718122_69718254_69718369_69718535_69726432
transcript_69829.known	chr16	-	2527	5	FSM	ENSG00000181019.13	ENST00000379047.7	2527	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	163.226070221641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	NA	False	NA	-3	True	AATAAA	-26	NA	69726668	69709400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69711282_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_69834.known	chr16	-	1716	9	FSM	ENSG00000141101.13	ENST00000268802.10	1716	9	0	0	0	0	multi-exon	TRUE	canonical	3	444	junction_4	26.219029348929	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	2	True	NA	-25	True	AATAAA	-15	NA	69754926	69741870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
transcript_69837.nic	chr16	-	1585	8	NIC	ENSG00000141101.13	novel	1716	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	159.104637626581	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	2	True	NA	-25	True	AATAAA	-15	NA	69754926	69741870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69754593_69754727_69754847
transcript_69849.nic	chr16	+	4580	25	NIC	ENSG00000198373.13	novel	4487	24	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	40.2646626156926	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGTGTTGTTGTGGA	NA	False	NA	13	True	AATAAA	-13	NA	69762290	69941738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_69762392_69776188_69776242_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
transcript_6985.nic	chr1	-	2340	12	NIC	ENSG00000116560.11	novel	874	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_3	695.052313864406	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	NA	False	NA	-16	True	AATAAA	-17	NA	35193179	35176379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_35176475_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_69851.nnic	chr16	+	4557	25	NNC	ENSG00000198373.13	novel	4487	24	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.7873255567989	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGTGTTGTTGTGGA	NA	False	NA	13	True	AATAAA	-13	NA	69762307	69941738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_69762392_69783105_69783153_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
transcript_69852.known	chr16	+	4487	24	FSM	ENSG00000198373.13	ENST00000359154.7	4487	24	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	24.9852130182077	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTGTTGTTGTGGAT	-9	True	NA	14	True	AATAAA	-14	NA	69762331	69941739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
transcript_69871.known	chr16	+	2474	9	FSM	ENSG00000198373.13	ENST00000569174.5	2474	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	51.388076194775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	3162	False	NA	2	True	AATAAA	-13	NA	69776186	69910250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69776242_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
transcript_69886.known	chr16	-	1580	18	FSM	ENSG00000196696.13	ENST00000529089.1	1580	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	119.705289780294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACAGTTCCTGTCCCAT	140	False	NA	NA	False	NA	NA	NA	70065818	69996163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70038986_70042350_70042417_70042929_70043004_70065755
transcript_69887.nic	chr16	-	2554	18	ISM	ENSG00000196696.13	ENST00000530079.5	2764	25	-125	19113	-30	549	5prime_fragment	FALSE	canonical	3	39	junction_3	118.645527710381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCCTGCAAAATTTGAAA	-20	True	NA	NA	False	NA	NA	NA	70065978	69995464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
transcript_69895.known	chr16	+	1970	12	FSM	ENSG00000157335.21	ENST00000569347.6	1970	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.16489003373258	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATGCTCATTTCAA	239	False	NA	NA	False	ATTAAA	-17	NA	70174024	70186895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70174403_70174946_70175039_70177240_70177481_70181849_70181948_70182367_70182490_70182646_70182755_70183280_70183374_70183752_70183860_70184493_70184624_70184895_70184993_70185884_70185977_70186482
transcript_69907.known	chr16	-	3572	22	FSM	ENSG00000090861.17	ENST00000565361.3	3572	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	371.808657785877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTGCTGGCTGCTGT	-18	True	NA	-33	True	AATAAA	-6	NA	70289557	70252306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254390_70254484_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69908.known	chr16	-	3527	21	FSM	ENSG00000090861.17	ENST00000675853.1	3527	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	291.257836804437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTGCTGGCTGCTGT	-18	True	NA	-33	True	AATAAA	-6	NA	70289557	70252306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253665_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69909.known	chr16	-	3441	21	FSM	ENSG00000090861.17	ENST00000676209.1	3441	21	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_10	287.43024806029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-16	True	NA	-29	True	AATAAA	-10	NA	70289555	70252302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262485_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69910.known	chr16	-	3489	21	FSM	ENSG00000090861.17	ENST00000676212.1	3489	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	291.932029760354	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-18	True	NA	-31	True	AATAAA	-8	NA	70289557	70252304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255719_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69911.known	chr16	-	3717	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_20	285.914829975642	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGCGTCTTTAAACAA	NA	False	NA	NA	False	NA	NA	NA	70289580	70251982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
transcript_69917.known	chr16	-	3389	21	FSM	ENSG00000090861.17	ENST00000675953.1	3389	21	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_17	294.524956497747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-8	True	NA	-29	True	AATAAA	-10	NA	70289547	70252302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271889_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69920.known	chr16	-	3544	21	FSM	ENSG00000090861.17	ENST00000676040.1	3544	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	293.388049347617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-8	True	NA	-29	True	AATAAA	-10	NA	70289547	70252302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269835_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69922.known	chr16	-	3458	21	FSM	ENSG00000090861.17	ENST00000674512.1	3458	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	294.91471648597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-16	True	NA	-31	True	AATAAA	-8	NA	70289555	70252304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262366_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69923.known	chr16	-	3508	21	FSM	ENSG00000090861.17	ENST00000675045.1	3508	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	294.700610790002	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-18	True	NA	-31	True	AATAAA	-8	NA	70289557	70252304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258245_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69924.known	chr16	-	3461	21	FSM	ENSG00000090861.17	ENST00000675035.1	3461	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	294.404224663981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-18	True	NA	-31	True	AATAAA	-8	NA	70289557	70252304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258052_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69928.known	chr16	-	3328	20	FSM	ENSG00000090861.17	ENST00000676211.1	3328	20	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_15	293.465302304224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-8	True	NA	-29	True	AATAAA	-10	NA	70289547	70252302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69932.known	chr16	-	3296	20	FSM	ENSG00000090861.17	ENST00000676168.1	3296	20	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_6	284.929043020866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-18	True	NA	-31	True	AATAAA	-8	NA	70289557	70252304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69935.known	chr16	-	3808	20	FSM	ENSG00000090861.17	ENST00000675986.1	3808	20	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_5	125.001163429489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCCTGCTGGCTGC	-18	True	NA	-36	True	AATAAA	-3	NA	70289557	70252309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69976.known	chr16	-	2545	15	FSM	ENSG00000090861.17	ENST00000564359.6	2545	15	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	291.847187089828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATCACTAGGTCAAGAGT	-18	True	NA	NA	False	NA	NA	NA	70289557	70255441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69981.known	chr16	-	4243	20	FSM	ENSG00000090861.17	ENST00000675403.1	4243	20	0	0	0	0	multi-exon	FALSE	canonical	2	914	junction_2	141.374397334194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-18	True	NA	-31	True	AATAAA	-8	NA	70289557	70252304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_69987.known	chr16	+	3275	12	FSM	ENSG00000157349.17	ENST00000288071.11	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_4	115.740590535562	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGCAGACTCCCAC	-6	True	NA	104	True	ATTAAA	-26	NA	70299185	70335305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_69988.known	chr16	+	2923	12	FSM	ENSG00000168872.17	ENST00000302243.12	2923	12	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_1	121.949928757531	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGTGTATATAAAGTGA	14	True	NA	17	True	AATATA	-18	NA	70346902	70373383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361511_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_69995.known	chr16	+	1692	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	178.443520476368	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	2	True	NA	40	True	AATACA	-16	NA	70299193	70333823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_69999.known	chr16	+	1703	11	FSM	ENSG00000168872.17	ENST00000417604.6	1703	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	181.44864287175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCGTGGAACCAGCTCC	16	False	NA	121	True	NA	NA	NA	70346943	70372297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_7.known	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00019_+_0_600
transcript_70.known	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	89.5	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_7552_7809_10553
transcript_70004.known	chr16	+	1717	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	185.897821396594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	-30	True	NA	43	True	AATACA	-19	NA	70299161	70333826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_70015.nic	chr16	-	4442	8	NIC	ENSG00000157350.13	novel	7920	7	NA	NA	-13	1785	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	82.6134346933762	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGCAGTGGTGC	-2	True	NA	NA	False	AATACA	-5	NA	70439035	70379788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191_70399534_70400695_70401095_70438948
transcript_70018.known	chr16	-	7920	7	FSM	ENSG00000157350.13	ENST00000342907.3	7920	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	15.1520075677559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTACACTTAGGCCG	-18	True	NA	-10	True	AATAAA	-16	NA	70439100	70375976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191_70399534_70438948
transcript_7002.known	chr1	-	3740	10	FSM	ENSG00000116560.11	ENST00000357214.6	3740	10	0	0	0	0	multi-exon	FALSE	canonical	3	1764	junction_8	159.424040506311	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGTCAGTTAA	-1	True	NA	-7	True	CATAAA	-14	NA	35193145	35182935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_70025.known	chr16	+	3907	24	FSM	ENSG00000157353.17	ENST00000288078.11	3907	24	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	6.90059036952746	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTCCTCGTAAAGTCAC	1	True	NA	13	True	AATAAA	-18	NA	70454594	70480274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70454631_70463168_70463273_70463622_70463775_70465125_70465177_70466131_70466258_70466881_70466955_70467373_70467472_70467885_70467967_70468848_70468969_70469151_70469324_70470313_70470427_70470970_70471073_70471181_70471353_70472540_70472606_70472982_70473354_70474128_70474340_70474527_70474695_70474789_70475012_70475349_70475494_70475647_70475768_70478271_70478460_70478550_70478651_70479179_70479404_70479578
transcript_70035.known	chr16	-	3000	20	FSM	ENSG00000103051.20	ENST00000564415.6	3000	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	121.290795461617	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGCTGTTACCAGG	-12	True	NA	-31	True	AATAAA	-19	NA	70523558	70480567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70515867_70516041_70517625_70517741_70519648_70519732_70523372
transcript_70039.known	chr16	-	2820	19	FSM	ENSG00000103051.20	ENST00000323786.10	2820	19	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_11	34.4364237973489	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTGCTGTTACC	-8	True	NA	-34	True	AATAAA	-16	NA	70523554	70480570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_70048.nic	chr16	-	3592	18	NIC	ENSG00000103051.20	novel	2953	20	NA	NA	-2	0	intron_retention	FALSE	canonical	3	347	junction_11	35.157677450836	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTGCTGTTA	-16	True	NA	-36	True	AATAAA	-14	NA	70523562	70480572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_70049.known	chr16	-	2761	18	FSM	ENSG00000103051.20	ENST00000674443.1	2761	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	97.914128043854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTGCTGTTA	-14	True	NA	-36	True	AATAAA	-14	NA	70523560	70480572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_70062.known	chr16	+	9692	26	FSM	ENSG00000189091.13	ENST00000302516.10	9692	26	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_18	108.99536870895	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCATTTCTTTTTCTT	11	True	NA	5	True	AATAAA	-18	NA	70523815	70577668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70523929_70526586_70526727_70528872_70529200_70530744_70530918_70532478_70532621_70535307_70535421_70538322_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672
transcript_70079.nnic	chr16	+	2110	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-27232	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	4.45969605341988	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70619326	70660682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_70619813_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_70080.nnic	chr16	+	1867	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-25323	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.82074574826616	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70621235	70660682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_70621479_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_70081.nnic	chr16	+	1729	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-24788	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.48528137423857	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70621770	70660682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_70621876_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_70082.nnic	chr16	+	1812	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-24177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.15908777602272	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70622381	70660682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_70622570_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_70084.nnic	chr16	+	1763	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-22568	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	4.6696419087073	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70623990	70660682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_70624130_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_70085.known	chr16	+	1779	7	FSM	ENSG00000157368.12	ENST00000429149.6	1779	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.15908777602272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	9	True	NA	33	True	ATTAAA	-18	NA	70579894	70660682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70580050_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_70086.known	chr16	+	1607	6	FSM	ENSG00000157368.12	ENST00000288098.7	1613	6	6	0	2	0	multi-exon	FALSE	canonical	3	17	junction_3	4.12795348811006	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	7	True	NA	33	True	ATTAAA	-18	NA	70646564	70660682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_70088.known	chr16	-	4979	15	FSM	ENSG00000132613.16	ENST00000338779.11	4979	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	4.20458932936041	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCCTCTGCCTGGCTG	1	True	NA	-5	True	AATAAA	-19	NA	70686053	70661203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70664450_70664597_70664764_70664919_70665097_70665465_70665541_70674305_70674529_70676880_70676979_70677791_70677900_70678251_70678410_70679314_70679324_70679629_70679705_70679785_70679878_70679970_70680056_70680793_70680868_70680963_70681026_70685722
transcript_70092.nic	chr16	-	3043	19	NIC	ENSG00000103043.15	novel	3096	19	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	79.0451699276362	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGCCGGCCTGCTCCTT	3893	False	NA	-1	True	AATAAA	-22	NA	70801189	70687438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697174_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_70096.known	chr16	-	3096	19	FSM	ENSG00000103043.15	ENST00000261776.10	3096	19	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	26.8948570052591	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGCCGGCCTGCTCCTT	-4	True	NA	-1	True	AATAAA	-22	NA	70801158	70687438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697258_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_70104.known	chr16	-	2945	18	FSM	ENSG00000103043.15	ENST00000568548.5	2945	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_17	84.0000823858551	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGAGCCGGCCTGCTCC	-6	True	NA	-3	True	AATAAA	-20	NA	70801160	70687440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697258_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70800796
transcript_70112.nic	chr16	-	2850	14	ISM	ENSG00000103043.15	ENST00000261776.10	3096	19	-31	43156	-29	680	5prime_fragment	FALSE	canonical	3	319	junction_3	20.7903027007914	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGGCCTCCCTCTGATG	3893	False	NA	NA	False	NA	NA	NA	70801189	70730594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_70119.nic	chr16	-	2099	12	ISM	ENSG00000103043.15	ENST00000261776.10	3096	19	-31	74662	-29	18697	5prime_fragment	FALSE	canonical	3	319	junction_1	21.4945697543733	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTAGGAGTGAGGAC	3893	False	NA	NA	False	AAAACA	-17	NA	70801189	70762100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_70121.nic	chr16	-	1967	10	ISM	ENSG00000103043.15	ENST00000261776.10	3096	19	-31	84152	-29	9207	5prime_fragment	FALSE	canonical	3	326	junction_6	20.1702629177916	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATGAAAGAAAATGGATT	3893	False	NA	NA	False	NA	NA	NA	70801189	70771590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_70128.nic	chr16	-	2156	9	ISM	ENSG00000103043.15	ENST00000261776.10	3096	19	-31	92580	-29	779	5prime_fragment	FALSE	canonical	3	326	junction_5	21.0085548051264	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAAAAATTAGCCAGATA	3893	False	NA	NA	False	NA	NA	NA	70801189	70780018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_70131.known	chr16	-	3609	1	FSM	ENSG00000103043.15	ENST00000571759.1	3609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGAGCCGGCCTGCTCC	7865	False	NA	-3	True	AATAAA	-20	NA	70691049	70687440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70687400_70691000
transcript_70132.known	chr16	-	4875	3	FSM	ENSG00000180917.18	ENST00000434935.7	4875	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	11	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTTGTAATCTGT	-1	True	NA	NA	False	ATTAAA	-15	NA	71289402	71281391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71285940_71288877_71288938_71289135
transcript_70135.known	chr16	+	1454	11	FSM	ENSG00000172137.19	ENST00000302628.9	1454	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	6.24819974072532	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGTCTAGTGGTC	-2	True	NA	8	True	AATAAA	-28	NA	71358722	71390433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71385576_71385649_71389748
transcript_70143.known	chr16	-	3186	5	FSM	ENSG00000167377.19	ENST00000357254.8	3186	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	21.6794833886788	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	NA	False	NA	5	True	AATAAA	-23	NA	71462759	71447596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456763_71456829_71462209
transcript_70148.known	chr16	+	2412	3	FSM	ENSG00000140835.10	ENST00000338482.5	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTTCTTTCTTGTGT	NA	False	NA	NA	False	AATAGA	-13	NA	71525232	71538746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71525365_71526119_71526313_71536659
transcript_70151.known	chr16	+	2159	2	FSM	ENSG00000140835.10	ENST00000539698.4	2159	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTTTCTTGTGTGA	-7	True	NA	NA	False	AATAGA	-15	NA	71526425	71538748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71526496_71536659
transcript_70157.known	chr16	-	4812	19	FSM	ENSG00000040199.18	ENST00000567016.1	4812	19	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_17	6.37050495120546	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAATCACCTTATCTC	30	True	NA	NA	False	NA	NA	NA	71723882	71648169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71650045_71652789_71653022_71655239_71655435_71656570_71656682_71658232_71658364_71658652_71658816_71663898_71664100_71667177_71667334_71669274_71669371_71672261_71672323_71676446_71676650_71678754_71678986_71679388_71679536_71681750_71681906_71684475_71684602_71690518_71690710_71702597_71702732_71714511_71714802_71723768
transcript_7016.nic	chr1	-	1643	5	ISM	ENSG00000116560.11	ENST00000357214.6	3740	10	-34	6349	-34	-6349	5prime_fragment	FALSE	canonical	3	1764	junction_3	48.8364617882991	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAACAAGTTGAAAAAAAC	NA	False	NA	-51	True	AAAACA	-6	NA	35193179	35189284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_70162.known	chr16	+	2914	3	FSM	ENSG00000140832.11	ENST00000268485.8	2914	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	31.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTCCTCAGTTTTTT	-4	True	NA	7	True	AATAAA	-16	NA	71626183	71636465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71626697_71629366_71629495_71634192
transcript_70167.known	chr16	+	2214	3	FSM	ENSG00000140832.11	ENST00000299952.4	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	37.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACGTGTTTTATACCTA	-1	True	NA	13	True	AATAAA	-20	NA	71626186	71641965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71626697_71629366_71629495_71640389
transcript_70173.known	chr16	+	850	2	FSM	ENSG00000140832.11	ENST00000567566.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTAGATTTCCTGTG	2	True	NA	NA	False	AAAAAG	-17	NA	71626160	71629680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71626697_71629366
transcript_70175.known	chr16	-	3593	24	FSM	ENSG00000166747.13	ENST00000393512.7	3593	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	43.9945433976904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATGGAGTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71809201	71732384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71767876_71767886_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_70177.known	chr16	-	6602	23	FSM	ENSG00000166747.13	ENST00000299980.9	6602	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_22	19.6750460740637	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	-9	True	NA	0	True	AATAAA	-25	NA	71808834	71728999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_70182.known	chr16	+	1962	11	FSM	ENSG00000182149.21	ENST00000541571.6	1962	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	341.243314952835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTCTGTTGATCCTG	9519	False	NA	NA	False	NA	NA	NA	71893933	71927973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71894482_71894720_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_70186.known	chr16	+	4082	10	FSM	ENSG00000182149.21	ENST00000535424.5	4082	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	271.050539681677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTTTAGTATTTTTT	293	False	NA	9	True	AATAAA	-25	NA	71894718	71930639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_70188.known	chr16	+	2356	10	FSM	ENSG00000182149.21	ENST00000329908.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	275.531316138183	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTACTGTTTGGTCA	17	True	NA	31	True	AATAAA	-21	NA	71895542	71929010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924772_71924818_71927613
transcript_7019.known	chr1	+	7366	30	FSM	ENSG00000146463.12	ENST00000314607.11	7366	30	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_1	57.9260055288464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAATTTTTTTTATG	6	True	NA	NA	False	AGTAAA	-27	NA	35268708	35422058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35269086_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
transcript_70198.nic	chr16	+	2327	9	NIC	ENSG00000182149.21	novel	4561	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	300.763611495806	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGCTGCTAATAAAGTTA	1069	False	NA	-5	True	NA	NA	NA	71895494	71928974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923385_71927613
transcript_70200.known	chr16	+	2255	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	264.963411389195	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	27	True	NA	29	True	AATAAA	-19	NA	71895552	71929008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
transcript_70210.known	chr16	-	1187	9	FSM	ENSG00000102984.15	ENST00000563878.5	1187	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	19.7954382371293	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGATATTGCCTTTAGTC	6	True	NA	NA	False	NA	NA	NA	71884158	71860597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867892_71868038_71879906_71880024_71881316_71881435_71883210_71883274_71883907
transcript_70215.known	chr16	-	1719	9	FSM	ENSG00000102984.15	ENST00000568666.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	18.8509780913352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCAGAACAGCAGCTCT	6	True	NA	NA	False	NA	NA	NA	71884158	71860046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867911_71868038_71879906_71880024_71881316_71881435_71883210_71883274_71883907
transcript_70223.nic	chr16	-	2020	8	NIC	ENSG00000102984.15	novel	1987	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_3	19.2406881798093	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	-32	True	NA	-10	True	AATAAA	-16	NA	71884196	71859684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867892_71868038_71879906_71880024_71883210_71883274_71883907
transcript_70225.known	chr16	-	1987	8	FSM	ENSG00000102984.15	ENST00000425432.6	1987	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	16.9873902813654	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	-18	True	NA	-10	True	AATAAA	-16	NA	71884182	71859684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867911_71868038_71879906_71880024_71883210_71883274_71883907
transcript_70228.known	chr16	+	1125	7	FSM	ENSG00000182149.21	ENST00000538850.5	1125	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	309.176549707265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTGGACAGTGGGAGA	22	True	NA	NA	False	NA	NA	NA	71895547	71928152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71895590_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_70230.nic	chr16	-	1846	7	NIC	ENSG00000102984.15	novel	1833	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_2	21.483844059096	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTGCTTTTCTCTCA	-20	True	NA	-5	True	AATAAA	-21	NA	71884184	71859679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_71860673_71864137_71864243_71864902_71865049_71867892_71868038_71879906_71880024_71883210_71883274_71883907
transcript_70232.known	chr16	-	1748	7	FSM	ENSG00000102984.15	ENST00000564134.5	1748	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.3134239615727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCACTGCCACAGGCTG	NA	False	NA	-101	True	NA	NA	NA	71884204	71859775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71864137_71864236_71864898_71865049_71867911_71868038_71879906_71880024_71883210_71883274_71883907
transcript_70236.known	chr16	-	1032	7	FSM	ENSG00000102984.15	ENST00000562797.5	1032	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	20.6350564708594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAAGTGGGCTCTACGTC	3	True	NA	NA	False	NA	NA	NA	71884161	71860492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71879906_71880024_71883210_71883274_71883907
transcript_70250.known	chr16	-	440	3	FSM	ENSG00000102984.15	ENST00000562677.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGCTAAGGGGTGGAA	27	True	NA	NA	False	AATAAA	-38	NA	71884137	71879876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71880024_71883210_71883274_71883907
transcript_70252.known	chr16	+	445	2	FSM	ENSG00000224470.9	ENST00000565676.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTAAAAGAAAGCACAAAG	77	False	NA	NA	False	NA	NA	NA	71846068	71848418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71846105_71848009
transcript_70253.known	chr16	+	7896	3	FSM	ENSG00000224470.9	ENST00000427980.7	7896	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTTGCGCCTTC	-16	True	NA	22	True	TATAAA	-14	NA	71845975	71857328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71846105_71848009_71848072_71849623
transcript_70261.known	chr16	+	4669	9	FSM	ENSG00000102967.12	ENST00000219240.9	4669	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	20.3004772111396	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTCTGTGACTTACTT	-6	True	NA	13	True	AATATA	-14	NA	72008743	72027659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123_72021312_72022361_72022476_72023164_72023319_72023473_72023634_72024144
transcript_70269.nic	chr16	+	4275	28	NIC	ENSG00000140829.12	novel	4323	27	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_27	45.4509488538433	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCATGTCTGACTTTT	-17	True	NA	19	True	AATAAA	-19	NA	72093796	72112909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412_72112530_72112624
transcript_70274.known	chr16	+	4323	27	FSM	ENSG00000140829.12	ENST00000268482.8	4323	27	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	37.4117699734239	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTCTGACTTTTTCC	33	True	NA	22	True	AATAAA	-22	NA	72093846	72112912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_70281.nic	chr16	+	4668	26	NIC	ENSG00000140829.12	novel	4323	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_1	37.7856268970094	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGACTGCATGTCTG	33	True	NA	13	True	AATAAA	-13	NA	72093846	72112903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_70298.known	chr16	-	2521	4	FSM	ENSG00000140830.9	ENST00000268483.8	2521	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.05536398239638	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	2	True	NA	-4	True	AATAAA	-17	NA	72093620	72084856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_72086803_72088986_72089139_72090617_72090787_72093366
transcript_70299.nnic	chr16	-	944	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	30.6521704868604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACTGTTAGTTGGGTT	711	False	NA	-6	True	AATAAA	-15	NA	72093672	72084858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
transcript_70302.nic	chr16	+	2192	3	ISM	ENSG00000140829.12	ENST00000268482.8	4323	27	-12	14458	-12	-1372	intron_retention	FALSE	canonical	3	130	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCCTGGACCATTAAAA	21	True	NA	NA	False	AAAAAG	-15	NA	72093834	72098454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_72094052_72096138_72096481_72096821
transcript_70304.known	chr16	+	1187	5	FSM	ENSG00000257017.10	ENST00000565574.5	1187	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.1650635094611	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCATTGCTGAGTCAA	1	True	NA	NA	False	NA	NA	NA	72054628	72061009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_72054658_72056160_72056244_72056529_72056632_72057391_72057467_72060111
transcript_70305.known	chr16	-	1997	6	FSM	ENSG00000261008.8	ENST00000662171.1	1997	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	7.93473376995095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTATCTCACGTTGCAT	-35	True	NA	NA	False	AATAAA	-29	NA	72665009	72521005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570434_72570516_72664891
transcript_70306.known	chr16	-	1984	6	FSM	ENSG00000261008.8	ENST00000659470.1	1984	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	5.91269819963779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-40	False	NA	NA	False	AATAAA	-27	NA	72665014	72521007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_70307.nic	chr16	-	913	2	ISM	ENSG00000261008.8	ENST00000570035.5	831	5	0	47583	0	-46389	5prime_fragment	FALSE	canonical	2	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGACACATGTATGCATA	-35	True	NA	NA	False	AAAAAG	-22	NA	72665009	72569720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_72570516_72664891
transcript_70316.known	chr16	+	1395	8	FSM	ENSG00000103035.11	ENST00000568717.1	1395	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	906.733833546515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGAATGGAGACTGAT	0	True	NA	117	True	NA	NA	NA	74296819	74305888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74296989_74299575_74299746_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_70318.known	chr16	+	1631	7	FSM	ENSG00000103035.11	ENST00000219313.9	1631	7	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_2	152.942708954112	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTAGTCGTTTTT	-6	True	NA	25	True	ATTAAA	-16	NA	74296813	74306288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_7032.known	chr1	+	466	4	FSM	ENSG00000146463.12	ENST00000441447.1	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	107.619700798692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAGTTAAAAAAAGA	4	True	NA	NA	False	AATACA	-5	NA	35269032	35359229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924
transcript_70322.known	chr16	+	931	6	FSM	ENSG00000103035.11	ENST00000568615.2	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_2	161.477676475728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGTGTCCTTCTCAAC	9	True	NA	NA	False	AATAAA	-18	NA	74296828	74304709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302
transcript_70324.known	chr16	+	2365	1	FSM	ENSG00000261079.1	ENST00000563701.1	2365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCTGTCCCTGATTTCC	NA	False	NA	NA	False	AGTAAA	-17	NA	74367461	74369826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74367500_74369800
transcript_70327.known	chr16	-	8261	27	FSM	ENSG00000090863.12	ENST00000205061.9	8261	27	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	120.776708489714	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGTGGTGACTGGG	-8	True	NA	-1	True	AATAAA	-27	NA	74607114	74447426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_70330.known	chr16	-	9287	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_8	41.4976818629668	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTGTTAAATCTTCTC	-8	True	NA	-14	True	AATAAA	-14	NA	74607114	74447439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_7035.nnic	chr1	+	753	3	ISM	ENSG00000146463.12	ENST00000314607.11	7366	30	-38	62842	-38	-13	5prime_fragment	FALSE	canonical	3	192	junction_1	63.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAATACAAATTCAAAATA	-32	True	NA	NA	False	AATGAA	-3	NA	35268670	35359216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35269086_35325359_35325406_35358924
transcript_70367.known	chr16	-	3033	14	FSM	ENSG00000168411.14	ENST00000571750.5	3033	14	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_13	80.9098409766322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTGTCCGGTTTA	7	True	NA	NA	False	NA	NA	NA	74666870	74623428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74664623_74664746_74666785
transcript_70371.known	chr16	-	4948	13	FSM	ENSG00000168411.14	ENST00000361070.9	4948	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	57.680152565679	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	0	True	NA	-13	True	AATAAA	-15	NA	74666877	74621398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74666785
transcript_7038.known	chr1	-	4777	21	FSM	ENSG00000142687.18	ENST00000325722.8	4777	21	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_20	25.4261676231397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTGCTGGGTGTG	-9	True	NA	-7	True	ATTAAA	-18	NA	35557403	35433491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
transcript_70381.nic	chr16	-	2397	3	ISM	ENSG00000168411.14	ENST00000361070.9	4948	13	-16	28955	-16	-5734	5prime_fragment	FALSE	canonical	3	245	junction_2	110.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGAATCTACTCAAGAC	-16	True	NA	NA	False	NA	NA	NA	74666893	74650353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_74652123_74660931_74661452_74666785
transcript_70382.known	chr16	-	841	3	FSM	ENSG00000168411.14	ENST00000575397.5	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCACAAAGTAATGAA	45	False	NA	NA	False	AATAAA	-11	NA	74666832	74660779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74661452_74664623_74664746_74666785
transcript_70383.known	chr16	-	458	2	FSM	ENSG00000168411.14	ENST00000572840.1	458	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTAGCTTGGGCCTTA	45	False	NA	NA	False	NA	NA	NA	74666832	74664334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74664746_74666785
transcript_70386.known	chr16	-	2477	11	FSM	ENSG00000168404.13	ENST00000308807.12	2477	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	2.37486841740758	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTGGTTTTTTAC	24	True	NA	2	True	AATAAA	-22	NA	74700862	74671854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74672539_74674959_74675101_74675354_74675405_74675612_74675765_74678898_74678981_74682650_74682787_74685485_74685584_74691276_74691464_74692341_74692417_74695297_74695760_74700452
transcript_70390.known	chr16	-	2405	7	FSM	ENSG00000103089.9	ENST00000219368.8	2405	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.44802681092953	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACCAACAAAAATGAGTT	4	True	NA	NA	False	AATAAA	-40	NA	74774820	74712968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74714270_74716346_74716600_74718987_74719161_74726224_74726332_74727243_74727387_74740022_74740116_74774485
transcript_70397.known	chr16	-	5878	26	FSM	ENSG00000103091.15	ENST00000262144.11	5878	26	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_11	29.3284844477174	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTGTTTGTTTATTTG	-10	True	NA	NA	False	AATAGA	-18	NA	74985123	74871361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_7043.known	chr1	-	3213	21	FSM	ENSG00000142687.18	ENST00000426982.6	3213	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_20	50.7079875364819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAATGGCTCTGTACCC	5	True	NA	NA	False	NA	NA	NA	35557655	35434964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557549
transcript_70435.known	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	29.7363414023985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	30	True	NA	0	True	ATTAAA	-18	NA	74985083	74908732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_70444.nic	chr16	-	1603	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-68	3385	-28	0	5prime_fragment	FALSE	canonical	3	184	junction_2	14.4201535498887	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATGAGATTCGGAAGT	11	False	74985162	-10	True	AGTAAA	-17	NA	74985151	74912117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_70462.known	chr16	-	2007	11	FSM	ENSG00000166816.15	ENST00000450168.3	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	16.0374561573836	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTGGAAGTCAGCAGG	4	True	NA	-9	True	AATAAA	-29	NA	75116780	75111863	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_70463.known	chr16	-	2067	11	FSM	ENSG00000166816.15	ENST00000300051.8	2067	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	26.0315193563495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAGTCAGCAGGCAGC	17	True	NA	-5	True	AATAAA	-33	NA	75116767	75111859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_70464.known	chr16	-	2043	11	FSM	ENSG00000166816.15	ENST00000569876.2	2043	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.6428345468177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATAAATCTGTAATAAAC	-5	True	NA	-45	True	NA	NA	NA	75116755	75111899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113654_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116611
transcript_70465.known	chr16	+	3250	4	FSM	ENSG00000184517.12	ENST00000393430.6	3250	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	25.7725090401036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTTTGTATATGAT	62	False	NA	11	True	AATAAA	-17	NA	75148581	75172236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75148663_75152908_75152967_75166769_75166897_75169252
transcript_70467.known	chr16	+	1426	3	FSM	ENSG00000184517.12	ENST00000568079.5	1426	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCCATGAGAACATTAT	-26	True	NA	NA	False	ATTAAA	-5	NA	75148493	75170470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75148644_75152908_75152967_75169252
transcript_70481.known	chr16	-	3387	8	FSM	ENSG00000050820.17	ENST00000418647.7	3387	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	271.280034545223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAGTGCAGTTTGGTGT	-4	True	NA	-81	True	NA	NA	NA	75266007	75229158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75264350_75264602_75265824
transcript_70483.known	chr16	-	2667	7	FSM	ENSG00000050820.17	ENST00000393420.10	2667	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	226.098614178268	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGACCCCAGGAGGG	390	False	NA	NA	False	NA	NA	NA	75251482	75229510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236827_75236999_75237182_75237345_75242469_75243091_75251470
transcript_7049.nic	chr1	-	3883	21	NIC	ENSG00000142687.18	novel	4777	21	NA	NA	-19	-147	combination_of_known_junctions	FALSE	canonical	3	47	junction_20	47.327872337556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGTTTGGTGGCGT	236	False	NA	NA	False	AATAAA	-9	NA	35557424	35434251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557361
transcript_70491.known	chr16	-	4085	7	FSM	ENSG00000050820.17	ENST00000162330.10	4085	7	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_6	93.4030989255115	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTATTTGTGTTTTAC	22	True	NA	0	True	NA	NA	NA	75251624	75228180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75251470
transcript_70493.known	chr16	-	3192	7	FSM	ENSG00000050820.17	ENST00000538440.6	3192	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	136.35462343952	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCGTTATTGGTTTTC	-4	True	NA	-25	True	NA	NA	NA	75266007	75229102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75265824
transcript_70508.known	chr16	-	4084	1	FSM	ENSG00000280152.1	ENST00000624205.1	4084	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1795	False	NA	NA	False	AATAGA	-16	NA	75250077	75245993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75246000_75250100
transcript_70511.known	chr16	-	1293	7	FSM	ENSG00000153774.9	ENST00000283882.4	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	87.1022706681953	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTCGCTCACCTTCCCT	-38	True	NA	-7	True	AATAAA	-41	NA	75433503	75293709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75294043_75305023_75305183_75395089_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_70515.known	chr16	-	1167	5	FSM	ENSG00000153774.9	ENST00000566901.5	1167	5	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	55.1333610439269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	75433461	75394681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_70525.known	chr16	-	4959	3	FSM	ENSG00000166822.13	ENST00000357613.8	4959	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	38	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	0	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451737_75451840_75464467
transcript_70526.known	chr16	-	547	3	FSM	ENSG00000166822.13	ENST00000566980.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	47.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTCATGTGTACCTTT	NA	False	NA	NA	False	AAAACA	-40	NA	75464737	75447309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451737_75451840_75464671
transcript_70527.known	chr16	-	2331	3	FSM	ENSG00000166822.13	ENST00000569540.5	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	46	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	14	True	NA	6	True	NA	NA	NA	75464416	75445713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451668_75451840_75464231
transcript_70528.known	chr16	-	5028	3	FSM	ENSG00000166822.13	ENST00000561878.2	5028	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	24	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	0	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451668_75451840_75464467
transcript_70539.known	chr16	-	2000	4	FSM	ENSG00000183196.10	ENST00000649341.1	2000	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.5854314646552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAACCAGGCCATCCTAG	-8	True	NA	NA	False	NA	NA	NA	75495445	75473360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75473468_75478532_75479845_75481816_75481892_75494939
transcript_70540.nnic	chr16	-	1131	4	NIC	ENSG00000183196.10	novel	2000	4	NA	NA	-50	57	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTGTGGTGGTTT	NA	False	NA	-4	True	AATAAA	-23	NA	75495495	75473123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75473468_75481816_75481892_75490613_75490770_75494939
transcript_70548.nnic	chr16	-	984	3	NIC	ENSG00000183196.10	novel	2000	4	NA	NA	-59	57	combination_of_known_splicesites	FALSE	canonical	2	15	junction_1	9	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTGTGGTGGTTT	NA	False	NA	-4	True	AATAAA	-23	NA	75495504	75473123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75473468_75481816_75481892_75494939
transcript_70549.nnic	chr16	-	1022	3	NIC	ENSG00000183196.10	novel	8370	3	NA	NA	-59	54	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGAGTGTTGTGGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	75495504	75473126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75473509_75481816_75481892_75494939
transcript_70551.nnic	chr16	-	2566	4	NIC	ENSG00000262583.2	novel	1443	4	NA	NA	-113	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	24.9844396019247	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGTTCTAATTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	75517373	75501692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75502815_75504680_75504825_75505154_75505284_75516202
transcript_70557.known	chr16	-	1869	11	FSM	ENSG00000065457.11	ENST00000307921.7	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	18.1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGACTTCCATTGTGT	-25	True	NA	NA	False	NA	NA	NA	75623300	75600001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402_75622465_75623237
transcript_70562.known	chr16	-	5757	10	FSM	ENSG00000065457.11	ENST00000564657.2	5757	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	9.11652955411823	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTTTTGTTTATCC	-6	True	NA	-26	True	AATAAA	-16	NA	75623281	75596867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402
transcript_70564.known	chr16	-	2768	10	FSM	ENSG00000065457.11	ENST00000566445.5	2768	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	25.9933514766306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	809	False	NA	NA	False	NA	NA	NA	75622466	75599099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618699_75620265_75620335_75620630_75620821_75622402
transcript_70572.known	chr16	-	4247	7	FSM	ENSG00000205084.12	ENST00000258173.11	4247	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	9.17726659862414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTGGTTTATTTCCT	-6	True	NA	-2	True	TATAAA	-17	NA	75556252	75536740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803_75555974_75556070
transcript_70573.known	chr16	-	2991	7	FSM	ENSG00000205084.12	ENST00000562410.5	2991	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	24.8109518828547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTCAAAATGGAAG	-22	True	NA	-23	True	AATAAA	-13	NA	75556268	75538135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75546078_75555803_75555974_75556070
transcript_70578.known	chr16	-	922	7	FSM	ENSG00000205084.12	ENST00000570006.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	27.8133660913837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCACTTATCCTAGAAAGG	13	True	NA	NA	False	NA	NA	NA	75556233	75540008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545863_75545955_75555803_75555974_75556070
transcript_70585.known	chr16	+	974	4	FSM	ENSG00000034713.8	ENST00000037243.7	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_1	39.1606378338703	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	-10	True	NA	NA	False	AATAAA	-19	NA	75566378	75577881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75566521_75566851_75566908_75568036_75568210_75577278
transcript_70589.known	chr16	+	1976	4	FSM	ENSG00000166848.7	ENST00000653858.1	1976	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	67.4306227828936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTACCCTGAAAATAAA	15	True	NA	NA	False	AAAAAG	-23	NA	75647790	75761830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75648553_75654272_75654398_75760049_75760141_75760832
transcript_70591.known	chr16	+	2131	3	FSM	ENSG00000166848.7	ENST00000300086.5	2131	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	13	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGTCAATAAGTGTTTT	-3	True	NA	55	True	AATAAA	-18	NA	75647772	75657432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75648553_75654272_75654398_75656206
transcript_70602.known	chr16	-	2421	15	FSM	ENSG00000065427.15	ENST00000319410.9	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_14	281.999963815311	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTCTGGTGGTGG	-7	True	NA	NA	False	AGTAAA	-3	NA	75647665	75627473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75644282_75644463_75647577
transcript_70609.known	chr16	-	1991	14	FSM	ENSG00000065427.15	ENST00000302445.8	1991	14	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_13	107.518541128452	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTCTCTTCTCTTT	-7	True	NA	-49	True	ATTAAA	-30	NA	75647665	75627723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75647577
transcript_70613.known	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	357.079707011983	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	10	True	NA	-95	True	NA	NA	NA	75647648	75627769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
transcript_70648.known	chr16	+	5813	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	9.21737489744233	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	-9	True	NA	14	True	AATAAA	-15	NA	77191189	77202398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
transcript_70653.nic	chr16	+	3898	5	NIC	ENSG00000103111.15	novel	5813	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	117	junction_2	9.33742469849155	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTATTGAAGAAAAACAAT	-43	True	NA	4	True	AATAAA	-14	NA	77190899	77199636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_77191259_77191475_77191634_77193450_77195155_77195534_77195683_77198107
transcript_70655.known	chr16	+	1759	5	FSM	ENSG00000103111.15	ENST00000439557.6	1759	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.8035466039931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTCTAGGGTGGCCC	-7	True	NA	NA	False	NA	NA	NA	77191191	77198673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77191259_77191475_77191634_77194334_77195155_77195534_77195683_77198107
transcript_70658.known	chr16	+	1057	11	FSM	ENSG00000205078.6	ENST00000378644.5	1057	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.1720256084048	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACAGGGGCCGGAGGG	-18	True	NA	NA	False	NA	NA	NA	77199407	77213215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77199513_77206440_77206501_77208209_77208270_77208464_77208540_77209096_77209145_77209416_77209472_77211212_77211277_77212129_77212200_77212281_77212370_77212573_77212647_77212856
transcript_70659.known	chr16	+	899	5	FSM	ENSG00000140876.11	ENST00000564085.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	38.989581941847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATTCACGAGGATT	-11	True	NA	NA	False	CATAAA	-41	NA	77722513	77741969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77741581
transcript_70660.known	chr16	+	1096	4	FSM	ENSG00000140876.11	ENST00000268533.9	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	38.8529993122224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGCATTTACCTTAT	-11	True	NA	NA	False	AATAAA	-19	NA	77722513	77742260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77741581
transcript_70661.known	chr16	+	930	3	FSM	ENSG00000140876.11	ENST00000437314.3	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	41.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	-6	True	NA	NA	False	AATAAA	-17	NA	77722518	77742258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77722618_77725430_77725585_77741581
transcript_70663.known	chr16	+	3791	9	FSM	ENSG00000171724.3	ENST00000302536.3	3791	9	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	18.0238557195734	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	0	True	NA	24	True	AATAAA	-24	NA	77788563	77980107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77884607_77884803_77971849_77971934_77977596
transcript_70668.nnic	chr16	+	2444	7	NNC	ENSG00000171724.3	novel	3791	9	NA	NA	-26	694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.1562241113071	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTAGTCAGTCTC	8	False	NA	-1	True	AATAAA	-4	NA	77788537	77883102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77881685
transcript_70669.nic	chr16	+	2007	7	NIC	ENSG00000171724.3	novel	3791	9	NA	NA	0	694	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	67.6767233906082	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTAGTCAGTCTC	0	True	NA	-1	True	AATAAA	-4	NA	77788563	77883102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77882096
transcript_70673.known	chr16	+	710	6	FSM	ENSG00000186153.18	ENST00000355860.7	710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.7513636103576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACATCTTCTTTTGTGG	-7	True	NA	NA	False	AATAAA	-21	NA	78099678	78278696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78164182_78164290_78278602
transcript_70674.known	chr16	+	654	5	FSM	ENSG00000186153.18	ENST00000562214.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	36.5171192730204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAGGCCCGGAACCCCG	-30	True	NA	NA	False	NA	NA	NA	78099655	78119076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78118954
transcript_70678.known	chr16	+	525	1	FSM	ENSG00000186153.18	ENST00000569818.1	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCAGCTCCCTCCTGC	-11	True	NA	23	True	AATAAA	-19	NA	78099674	78100199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78099700_78100200
transcript_70679.known	chr16	-	2669	2	FSM	ENSG00000178573.7	ENST00000326043.5	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCTGTGTGATTTTTT	-1	True	NA	NA	False	AATACA	-17	NA	79600737	79593837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_79594554_79598784
transcript_70686.known	chr16	+	3928	11	FSM	ENSG00000166451.14	ENST00000305850.10	3928	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	456.452943905503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	-11	True	NA	28	True	AATAAA	-19	NA	81007213	81031485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_70695.known	chr16	+	971	10	FSM	ENSG00000166451.14	ENST00000428963.6	971	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	475.671325472267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTTAAGCACAGCTCC	19	True	NA	NA	False	GATAAA	-13	NA	81007243	81028660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_70702.known	chr16	+	1398	7	FSM	ENSG00000166451.14	ENST00000299572.9	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_6	178.385739963211	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTGTTTTATACCA	14	True	NA	25	True	AATAAA	-27	NA	81006551	81022885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022754
transcript_70709.known	chr16	-	640	6	FSM	ENSG00000103121.9	ENST00000565925.5	640	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	399.513704395732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-24	True	NA	NA	False	AATAAA	-43	NA	81006875	80976049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_70713.nic	chr16	-	864	5	NIC	ENSG00000103121.9	novel	871	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	312	junction_2	419.682841560148	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	209	False	NA	-11	True	AATAAA	-14	NA	81006921	80975801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81006733
transcript_70716.known	chr16	-	801	5	FSM	ENSG00000103121.9	ENST00000570086.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	522.118281618256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTTTTTTCTCCTTTC	-24	True	NA	-16	True	AATAAA	-9	NA	81006875	80975806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80981805_80981878_80996922_80997021_80997313_80997430_81006733
transcript_70718.known	chr16	-	671	5	FSM	ENSG00000103121.9	ENST00000565650.5	671	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	487.195225243434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAGGGCGTTTAGTAC	236	False	NA	NA	False	NA	NA	NA	81006894	80975927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_70720.known	chr16	-	887	5	FSM	ENSG00000260643.2	ENST00000638948.1	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	958.719719208904	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATACTATTTTGGAATGC	154	False	NA	-96	True	NA	NA	NA	81096233	81053586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81054095_81084462_81084595_81087600_81087665_81090600_81090681_81096130
transcript_70723.known	chr16	-	1560	5	FSM	ENSG00000140905.11	ENST00000315467.9	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	2157	junction_3	47.7879430400598	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGACTCTGATAGTATT	-8	True	NA	-6	True	AATAAA	-34	NA	81096395	81081944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81084462_81084595_81087600_81087665_81090600_81090681_81096130
transcript_70727.known	chr16	+	4881	4	FSM	ENSG00000166454.10	ENST00000299575.5	4881	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_3	55.5117605157282	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTATTTTCATTGTTT	-1	True	NA	9	True	GATAAA	-20	NA	81035841	81047350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81036207_81041355_81041482_81042280_81042481_81043160
transcript_70728.known	chr16	-	766	4	FSM	ENSG00000103121.9	ENST00000486645.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	498.469880957939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	235	False	NA	-11	True	AATAAA	-14	NA	81006895	80975801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80980769_80980880_80997313_80997430_81006733
transcript_70729.known	chr16	-	424	4	FSM	ENSG00000103121.9	ENST00000564174.5	424	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	19.8718114143852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAAAGACTCTGGGTT	-3	True	NA	NA	False	AATAAA	-33	NA	81006854	80976059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80997313_80997430_80998284_80998352_81006733
transcript_70730.known	chr16	-	10072	4	FSM	ENSG00000103121.9	ENST00000219400.8	10072	4	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	148.501402911443	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCATTATTTTTT	-34	True	NA	NA	False	ATTAAA	-19	NA	81006885	80966447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_81006733
transcript_70733.known	chr16	-	2537	4	FSM	ENSG00000140905.11	ENST00000639169.1	2537	4	0	0	0	0	multi-exon	FALSE	canonical	3	2157	junction_2	47.8400111482707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATACACTGCATTTGCT	51	False	NA	-92	True	NA	NA	NA	81096336	81082407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81084595_81087600_81087665_81090600_81090681_81096130
transcript_70734.known	chr16	-	975	4	FSM	ENSG00000140905.11	ENST00000564386.6	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1041.94508279254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCGTTAATCATGTTT	122	False	NA	-20	True	AATAAA	-4	NA	81096265	81082335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81084462_81084595_81090600_81090681_81096130
transcript_70738.known	chr16	-	399	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	560.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-35	True	NA	NA	False	AATAAA	-43	NA	81006886	80976049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_70739.known	chr16	-	403	3	FSM	ENSG00000140905.11	ENST00000561801.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1115.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTCTTAAATTAGTGG	130	False	NA	NA	False	AATAAA	-27	NA	81096257	81082819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81084462_81084595_81096130
transcript_70742.known	chr16	-	647	3	FSM	ENSG00000140905.11	ENST00000569885.6	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1104.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGAAATACTTAATGATC	147	False	NA	NA	False	NA	NA	NA	81096240	81082506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81090600_81090681_81096130
transcript_70743.known	chr16	-	561	2	FSM	ENSG00000166455.14	ENST00000444657.3	561	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGCTTCACTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	81077267	81061709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81062139_81077135
transcript_70744.known	chr16	+	716	1	FSM	ENSG00000261061.1	ENST00000566639.1	716	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	NA	False	NA	28	True	AATAAA	-19	NA	81030769	81031485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81030800_81031500
transcript_70745.known	chr16	-	612	3	FSM	ENSG00000103121.9	ENST00000569187.5	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTCTCCTTTCTCT	233	False	NA	-13	True	AATAAA	-12	NA	81006897	80975803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80981805_80981878_81006733
transcript_70747.known	chr16	-	1488	7	FSM	ENSG00000166473.17	ENST00000531391.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.77123616632825	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTCTGGGATCTGCT	-3	True	NA	0	True	AATAAA	-16	NA	81181329	81170288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81170806_81170942_81171075_81174719_81174915_81175604_81175751_81177806_81177984_81179644_81179787_81181150
transcript_70752.known	chr16	+	15159	11	FSM	ENSG00000261609.8	ENST00000648994.2	15159	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.55631429995781	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTTTCTGATTTT	13	True	NA	10	True	AATAAA	-21	NA	81314961	81390809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81315281_81351582_81351698_81354404_81354756_81356784_81357003_81357809_81357932_81362498_81362612_81363793_81363944_81364973_81365111_81365349_81365479_81377218_81377329_81377414
transcript_70757.known	chr16	+	8666	33	FSM	ENSG00000197943.11	ENST00000564138.6	8666	33	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_19	12.5298082088275	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAATCTGCCCAGAAC	0	True	NA	NA	False	AATAAA	-18	NA	81779290	81962685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81779425_81785942_81786183_81854443_81854588_81858262_81858357_81859115_81859164_81869213_81869299_81870851_81870936_81880909_81880954_81883268_81883342_81889171_81889274_81891471_81891591_81893708_81893795_81895806_81895928_81900611_81900781_81905402_81905508_81907684_81907775_81908415_81908592_81910519_81910721_81912596_81912717_81919483_81919665_81921197_81921270_81923484_81923595_81927081_81927179_81928557_81928625_81931496_81931655_81934428_81934532_81936168_81936379_81937757_81937904_81938800_81938916_81939891_81940060_81946174_81946264_81956694_81956880_81957955
transcript_70766.known	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	17.5356779167502	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-20	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
transcript_70769.known	chr16	-	619	3	FSM	ENSG00000135698.10	ENST00000569599.5	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACGGAAAAATGTTACT	5	True	NA	NA	False	NA	NA	NA	82170199	82151083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_82151515_82164081_82164195_82170124
transcript_70770.known	chr16	+	831	5	FSM	ENSG00000140945.17	ENST00000431540.7	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.49106001094224	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATCACATTATTGGGT	2	True	NA	NA	False	AATAAA	-18	NA	82626969	83181094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_82627138_82858361_82858474_83032009_83032219_83125384_83125502_83180869
transcript_70771.known	chr16	+	8649	4	FSM	ENSG00000230989.8	ENST00000433866.7	8649	4	0	0	0	0	multi-exon	FALSE	canonical	3	5804	junction_3	326.662244868032	833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTTATCTTTATTTT	-33	True	NA	NA	False	ATTAAA	-16	NA	83807977	83819737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_83808122_83808679_83808747_83809304_83809426_83811420
transcript_70781.known	chr16	+	1922	6	FSM	ENSG00000140961.14	ENST00000393306.6	1922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.00665927567458	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCGTCTGAGGACTC	0	True	NA	2	True	AATAAA	-17	NA	83953239	83966332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_83953371_83957639_83957739_83959259_83959397_83960568_83960761_83960980_83961073_83965061
transcript_70782.known	chr16	+	13054	5	FSM	ENSG00000103150.7	ENST00000262430.6	13054	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	11.9687092035858	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGCATACCTGCACTC	-3	True	NA	NA	False	AATAAA	-22	NA	83899114	83927031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_83899673_83906986_83907100_83908125_83908283_83912217_83912368_83914955
transcript_70785.nnic	chr16	+	1966	5	Fusion	ENSG00000103150.7_ENSG00000140961.14	novel	13054	5	NA	NA	-37	-2571	multi-exon	FALSE	canonical	0	0	junction_4	64.8633178306506	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTACCTTTTTGGTA	NA	False	NA	11	True	ATTAAA	-12	NA	83899077	83948581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_+_83899673_83906986_83907100_83908125_83908283_83912217_83912368_83947630
transcript_70786.nic	chr16	+	2470	4	ISM	ENSG00000103150.7	ENST00000262430.6	13054	5	-37	13209	-37	-2349	5prime_fragment	FALSE	canonical	3	139	junction_1	9.17726659862414	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTTCGGGGTGGGGGA	NA	False	NA	NA	False	NA	NA	NA	83899077	83913822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_83899673_83906986_83907100_83908125_83908283_83912217
transcript_70798.known	chr16	-	4377	23	FSM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_5	23.8124993221405	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTAACGGACTCT	-22	True	NA	-15	True	AATAAA	-27	NA	84116942	84053762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_7080.known	chr1	+	3433	8	FSM	ENSG00000020129.16	ENST00000356090.8	3433	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	20.3499987464273	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	-23	True	NA	20	True	AATAAA	-20	NA	35557791	35566779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_70807.nic	chr16	-	4299	19	ISM	ENSG00000140943.18	ENST00000343411.8	4377	23	-7	8354	-7	-2814	5prime_fragment	FALSE	canonical	3	235	junction_1	24.5356882927706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATTAAAAGTGAGGGT	-29	True	NA	NA	False	AATAAA	-7	NA	84116949	84062116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_70819.known	chr16	+	521	1	FSM	ENSG00000260018.1	ENST00000565382.1	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGGGTGACTTAGAT	3	True	NA	23	True	AATAAA	-36	NA	84117050	84117571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84117000_84117600
transcript_7082.nnic	chr1	+	3581	8	NNC	ENSG00000020129.16	novel	3433	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.9131500659102	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	-29	True	NA	13	True	AATAAA	-13	NA	35557785	35566772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_35557884_35558155_35558373_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_70820.known	chr16	-	1493	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	113.710768570478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGCTGCACTTCA	-6	True	NA	NA	False	NA	NA	NA	84145169	84124122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
transcript_70824.known	chr16	-	3648	6	FSM	ENSG00000103160.12	ENST00000219439.9	3648	6	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_5	25.6093732840146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATAACTATGTGCCT	-14	True	NA	-12	True	ATTAAA	-23	NA	84145177	84122140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130432_84131101_84131328_84135543_84135606_84145079
transcript_70827.known	chr16	-	542	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	18	False	84145210	3	True	AATAAA	-30	NA	84145192	84130960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84131328_84135543_84135606_84145079
transcript_7083.nic	chr1	+	3712	8	NIC	ENSG00000020129.16	novel	3433	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.9131500659102	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	314	False	NA	13	True	AATAAA	-13	NA	35557766	35566772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_35557884_35558155_35558485_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_70835.nic	chr16	-	3702	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	111.718304640899	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	9976	False	NA	-17	True	ATTAAA	-17	NA	84187069	84177854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_70836.nic	chr16	-	3781	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	114.213302952977	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-11	True	NA	-17	True	ATTAAA	-17	NA	84187058	84177854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184990_84186900
transcript_70837.nic	chr16	-	3865	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	97.6507730096785	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	9974	False	NA	-17	True	ATTAAA	-17	NA	84187071	84177854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_70846.nic	chr16	-	3178	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	1	370	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	111.718304640899	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGGTCACGTTTTTT	9976	False	NA	-4	True	AATACA	-20	NA	84187069	84178378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_70848.nic	chr16	-	3341	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	-1	370	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	97.6507730096785	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGGTCACGTTTTTT	9974	False	NA	-4	True	AATACA	-20	NA	84187071	84178378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_7086.nic	chr1	+	3891	8	NIC	ENSG00000020129.16	novel	3433	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	68.7203739506587	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	-26	True	NA	13	True	AATAAA	-13	NA	35557788	35566772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_35557884_35558155_35558686_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_70860.nic	chr16	-	2971	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	97.6507730096785	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTATATTCGCCTGAA	9974	False	NA	-36	True	AATACA	-18	NA	84187071	84178748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_70913.nic	chr16	-	4691	13	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_7	99.6895180046528	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	9974	False	NA	-17	True	ATTAAA	-17	NA	84187071	84177854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_70923.nic	chr16	-	4167	13	NIC	ENSG00000103168.17	novel	4637	13	NA	NA	-1	370	intron_retention	FALSE	canonical	0	0	junction_7	99.6895180046528	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGGTCACGTTTTTT	9974	False	NA	-4	True	AATACA	-20	NA	84187071	84178378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_7094.known	chr1	+	3698	7	FSM	ENSG00000020129.16	ENST00000373243.7	3698	7	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	20.8386659841747	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	-16	True	NA	20	True	AATAAA	-20	NA	35557798	35566779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_70953.known	chr16	-	2349	11	FSM	ENSG00000103168.17	ENST00000570117.5	2349	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	117.790704217268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGCCACCTTCTGGAGG	-10	True	NA	-135	True	NA	NA	NA	84187057	84178847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84184850_84184900_84186900
transcript_7098.nic	chr1	+	4184	7	NIC	ENSG00000020129.16	novel	3677	7	NA	NA	-24	0	intron_retention	FALSE	canonical	3	24	junction_1	74.174718664036	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	315	False	NA	13	True	AATAAA	-13	NA	35557767	35566772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_35558686_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_70985.known	chr16	-	3847	15	FSM	ENSG00000103168.17	ENST00000566732.6	3847	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.6507730096785	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-10	True	NA	-17	True	ATTAAA	-17	NA	84187057	84177854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_70986.known	chr16	-	3678	15	FSM	ENSG00000103168.17	ENST00000341690.10	3678	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	129.465640387001	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGGAAAACTATGATGCT	-2	True	NA	-14	True	ATTAAA	-20	NA	84187049	84177851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180081_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_70987.known	chr16	-	3810	14	FSM	ENSG00000103168.17	ENST00000564208.5	3810	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	113.33377421889	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGGAAAACTATGATG	-5	True	NA	-16	True	ATTAAA	-18	NA	84187052	84177853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_70988.known	chr16	-	4637	13	FSM	ENSG00000103168.17	ENST00000564774.5	4637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	99.6895180046528	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGGAAAACTATGATG	-10	True	NA	-16	True	ATTAAA	-18	NA	84187020	84177853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_70989.known	chr16	-	3879	14	FSM	ENSG00000103168.17	ENST00000567759.5	3879	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	101.182593165837	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-1	True	NA	-17	True	ATTAAA	-17	NA	84187011	84177854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_70990.nic	chr16	+	2090	10	NIC	ENSG00000140955.11	novel	2283	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.25707872210942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTGTAGTTGGCTG	5849	False	NA	7	True	AATAAA	-16	NA	84191114	84197166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_84191649_84194441_84194583_84194932_84194981_84195068_84195195_84195265_84195447_84195529_84195698_84195814_84196045_84196126_84196371_84196646_84196768_84196869
transcript_70991.known	chr16	+	2018	10	FSM	ENSG00000140955.11	ENST00000315906.10	2018	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	0.993807989999907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTGTAGTTGGCTG	-4	True	NA	7	True	AATAAA	-16	NA	84191156	84197166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84191649_84194441_84194583_84194932_84194981_84195068_84195195_84195295_84195447_84195529_84195698_84195814_84196045_84196126_84196371_84196646_84196768_84196869
transcript_70993.known	chr16	+	3472	28	FSM	ENSG00000064270.13	ENST00000416219.6	3472	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	6.13027298850388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGTGTTTACCTAGG	0	True	NA	NA	False	AATAAA	-23	NA	84368526	84464187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84368715_84398498_84398610_84405127_84405245_84408404_84408495_84410567_84410604_84410703_84410766_84415482_84415592_84422389_84422540_84422628_84422698_84423187_84423264_84425734_84425802_84439165_84439291_84439426_84439525_84440856_84440959_84442509_84442600_84446328_84446431_84448532_84448690_84451920_84452092_84453137_84453236_84453320_84453372_84454817_84454985_84459119_84459189_84459269_84459387_84459505_84459593_84460653_84460802_84461713_84461813_84461987_84462130_84463613
transcript_70994.known	chr16	+	3374	27	FSM	ENSG00000064270.13	ENST00000262429.9	3374	27	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_10	4.65813534067775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGTGTTTACCTAGG	11	True	NA	NA	False	AATAAA	-23	NA	84368537	84464187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84368715_84398498_84398610_84405127_84405245_84408404_84408495_84410567_84410604_84410703_84410766_84415482_84415592_84422389_84422540_84422628_84422698_84423187_84423264_84425734_84425802_84439165_84439291_84439426_84439525_84440856_84440959_84442509_84442600_84446328_84446431_84448532_84448690_84451920_84452092_84453137_84453236_84453320_84453372_84454817_84454985_84459119_84459189_84459269_84459387_84460653_84460802_84461713_84461813_84461987_84462130_84463613
transcript_71008.nnic	chr16	-	3306	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-14	1647	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.9362875995571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCCGTCAGTGTCT	NA	False	NA	16	True	ATTAAA	-45	NA	84504704	84478049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_84479391_84479447_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_71010.nnic	chr16	-	3305	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-14	1647	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.9362875995571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCCGTCAGTGTCT	NA	False	NA	16	True	ATTAAA	-45	NA	84504704	84478049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_84479429_84479486_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_71011.nnic	chr16	-	3305	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-14	1647	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.9362875995571	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCCGTCAGTGTCT	NA	False	NA	16	True	ATTAAA	-45	NA	84504704	84478049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_84479467_84479524_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_71012.nnic	chr16	-	3462	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	9	1647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5176391216864	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCCGTCAGTGTCT	-34	True	NA	16	True	ATTAAA	-45	NA	84504681	84478049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
transcript_71022.nnic	chr16	-	1870	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	9	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5176391216864	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCAGTCTTATACTTTG	-34	True	NA	-12	True	AAGAAA	-17	NA	84504681	84479641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
transcript_71023.nic	chr16	-	1886	9	NIC	ENSG00000140950.16	novel	1837	9	NA	NA	13	55	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	79.1675438547894	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCAGTCTTATACTTTG	-30	True	NA	-12	True	AAGAAA	-17	NA	84504677	84479641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502863_84504600
transcript_71024.known	chr16	-	5013	8	FSM	ENSG00000140950.16	ENST00000343629.11	5013	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.7851343953503	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAAAACTATATTTTG	-12	True	NA	NA	False	ATTAAA	-20	NA	84504659	84476354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_71028.known	chr16	-	437	2	FSM	ENSG00000140950.16	ENST00000565701.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAACGCATCCCTCCCC	18	True	NA	NA	False	NA	NA	NA	84504629	84497703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84498112_84504600
transcript_71029.known	chr16	-	2433	1	FSM	ENSG00000140950.16	ENST00000567321.1	2433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	84488436	84486003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84486000_84488400
transcript_71031.known	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	84.2060963747083	1312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-2	True	NA	-20	True	AATAAA	-24	NA	84618078	84565595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
transcript_71040.nnic	chr16	+	2206	5	NIC	ENSG00000135686.13	novel	7559	5	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	52.3420242252819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATCTTGCTTGAATAAC	NA	False	NA	17	True	ATTAAA	-17	NA	84648455	84662309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_84648650_84650851_84650931_84656870_84657914_84659759_84659918_84661577
transcript_71042.known	chr16	+	7559	5	FSM	ENSG00000135686.13	ENST00000564996.6	7559	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	16.2692194035239	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTTCCTTTTGGTGTT	-9	True	NA	22	True	AATATA	-14	NA	84648510	84667686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84648650_84650851_84650931_84656870_84657945_84659759_84659918_84661577
transcript_71044.nic	chr16	+	2391	3	ISM	ENSG00000135686.13	ENST00000258157.9	1974	4	-79	3326	-55	1834	5prime_fragment	FALSE	canonical	3	109	junction_1	13	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTCTTCTACTTTTTG	NA	False	NA	NA	False	AAAAAG	-11	NA	84648455	84658988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_84648650_84650851_84650931_84656870
transcript_71053.known	chr16	+	2717	15	FSM	ENSG00000103194.16	ENST00000570191.5	2717	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	496.240072126056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGGGCTAGAATGAAA	9	True	NA	NA	False	NA	NA	NA	84700003	84779194	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84704739_84704861_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_71061.known	chr16	+	3328	14	FSM	ENSG00000103194.16	ENST00000219473.12	3328	14	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_4	163.701163728048	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	5	True	NA	31	True	AATAAA	-21	NA	84699999	84779922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_71080.known	chr16	+	1315	12	FSM	ENSG00000103194.16	ENST00000563048.5	1315	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	421.117423407677	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTGAAACCAACTGCTG	9	True	NA	NA	False	NA	NA	NA	84700003	84779015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84733434_84733504_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_711.known	chr1	+	2805	1	FSM	ENSG00000176022.7	ENST00000379198.5	2805	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCCCAGGCTGACCCT	-15	True	NA	16	True	ATTAAA	-18	NA	1232236	1235041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1232200_1235000
transcript_71108.known	chr16	+	888	5	FSM	ENSG00000103194.16	ENST00000562743.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	706.572492742252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCGGGGCTGATTTT	-9	True	NA	NA	False	NA	NA	NA	84699985	84745211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84733052_84733106_84733434_84733504_84740308_84740370_84744632
transcript_71110.known	chr16	+	2178	15	FSM	ENSG00000103196.12	ENST00000567845.5	2178	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.95733127485516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAACACAGTC	8	True	NA	NA	False	AATGAA	-17	NA	84819990	84907112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84820134_84838421_84838736_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866899_84867041_84868850_84868912_84872441_84872509_84872991_84873123_84873919_84873964_84877437_84877511_84880508_84880585_84889229_84889364_84906587
transcript_71111.nic	chr16	+	4375	14	NIC	ENSG00000103196.12	novel	1123	9	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	4.19777343065916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCAGGCTCTGGACTGT	NA	False	NA	2	True	AATAAA	-14	NA	84842010	84909508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_84842266_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866896_84867041_84868850_84868912_84872441_84872509_84872991_84873123_84873919_84873964_84877437_84877511_84880508_84880585_84889229_84889364_84906587
transcript_71112.known	chr16	+	1739	2	FSM	ENSG00000103196.12	ENST00000565561.1	1739	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCCACATCT	14	False	NA	NA	False	NA	NA	NA	84819996	84840023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84820134_84838421
transcript_71116.known	chr16	-	1488	9	FSM	ENSG00000153786.13	ENST00000564466.5	1488	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	105.069024931233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTTATATATTTATA	-10	True	NA	NA	False	NA	NA	NA	85011502	84976212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869_84981995_84988762_84988874_84990303_84990636_84995921_84996008_85011285
transcript_71120.known	chr16	-	3448	8	FSM	ENSG00000153786.13	ENST00000313732.9	3448	8	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	24.8472886871393	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAATCTCAAGTACCT	-2	True	NA	NA	False	AATAAA	-24	NA	85011535	84974174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869_84981995_84990303_84990636_84995921_84996008_85011285
transcript_71124.known	chr16	+	7381	12	FSM	ENSG00000135709.14	ENST00000538274.6	7360	12	-31	10	-31	2	multi-exon	FALSE	canonical	2	5	junction_8	7.61360244225822	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCTGTTTAA	2	False	NA	NA	False	AATAAA	-9	NA	85027750	85094220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924_85079004_85081314_85081393_85086643_85086725_85087071_85087167_85088275
transcript_71127.nic	chr16	+	1918	8	ISM	ENSG00000135709.14	ENST00000538274.6	7360	12	-16	14476	-16	0	5prime_fragment	FALSE	canonical	3	18	junction_2	3.18157963590287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGTTTTAGAGGGTGA	-27	True	NA	7	True	AATACA	-16	NA	85027765	85079754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924
transcript_71128.nic	chr16	+	2981	8	ISM	ENSG00000135709.14	ENST00000538274.6	7360	12	-16	13413	-16	1063	5prime_fragment	FALSE	canonical	3	18	junction_2	3.18157963590287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAATGTTTTTTTCCTTG	-27	True	NA	NA	False	AATAAA	-14	NA	85027765	85080817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924
transcript_7113.known	chr1	-	4426	6	FSM	ENSG00000126067.12	ENST00000373237.4	4426	6	0	0	0	0	multi-exon	FALSE	canonical	3	2452	junction_4	52.7461846961465	1210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATGGCCTCGTCATTC	7	True	NA	-20	True	CATAAA	-19	NA	35641526	35599540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35603375_35605232_35605283_35609245_35609409_35631273_35631345_35636309_35636433_35641341
transcript_71136.nnic	chr16	+	4787	16	NIC	ENSG00000131149.19	novel	4366	15	NA	NA	-62	140	combination_of_known_splicesites	TRUE	canonical	3	16	junction_1	37.5946804747693	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCTTTTAGTGTTTGTA	112	False	NA	47	True	NA	NA	NA	85611346	85673494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_85611532_85633913_85634133_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_71137.nnic	chr16	+	4844	16	NIC	ENSG00000131149.19	novel	4366	15	NA	NA	-39	220	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	37.5946804747693	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGAGCTTACCACTGG	-8	True	NA	1	True	ATTAAA	-38	NA	85611369	85673574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_85611532_85633913_85634133_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_71142.known	chr16	+	7385	16	FSM	ENSG00000131149.19	ENST00000253458.12	7385	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	31.5359406955866	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGAGGAAAATCTTTT	6	True	NA	13	True	AATAAA	-15	NA	85613321	85676200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85613399_85633913_85634133_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_71154.known	chr16	+	4366	15	FSM	ENSG00000131149.19	ENST00000405402.6	4366	15	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	39.9691207339478	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTTTTATTACTTTA	0	True	NA	10	True	ATTAAA	-16	NA	85611408	85673354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85611532_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_71159.known	chr16	+	7140	15	FSM	ENSG00000131149.19	ENST00000393243.5	7140	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	36.6037803333737	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAAAATCTTTTTTAT	36	False	NA	17	True	AATAAA	-19	NA	85613351	85676204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85613399_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_71174.known	chr16	-	601	3	FSM	ENSG00000270124.1	ENST00000602862.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGTCTACTGTCT	3	True	NA	NA	False	NA	NA	NA	85583571	85580008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85580230_85582018_85582170_85583342
transcript_71178.known	chr16	-	2628	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	55.9598070046708	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAAGATTTTATTTTT	12	True	NA	-10	True	CATAAA	-23	NA	85688954	85676197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
transcript_71179.known	chr16	-	832	5	FSM	ENSG00000154102.11	ENST00000602766.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	25.5575331360443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCATAAGCACCAACAAG	23	False	NA	-45	True	NA	NA	NA	85751112	85707653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85710163_85710286_85710409_85710474_85735189_85735236_85750925
transcript_71180.known	chr16	-	744	4	FSM	ENSG00000154102.11	ENST00000602675.5	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.7826382244655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	184	False	NA	92	True	AATAAA	-17	NA	85750951	85707516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85710163_85710286_85735189_85735236_85750925
transcript_71181.known	chr16	-	911	4	FSM	ENSG00000154102.11	ENST00000284245.9	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	11.0855260988773	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	39	False	85751117	92	True	AATAAA	-17	NA	85751096	85707516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85710163_85710308_85735189_85735236_85750925
transcript_71183.known	chr16	-	761	3	FSM	ENSG00000154102.11	ENST00000602914.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTCTGTAACAAATAGTG	30	False	85751117	77	True	AATAAA	-2	NA	85751105	85707531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85735189_85735236_85750925
transcript_71187.known	chr16	+	794	5	FSM	ENSG00000131143.10	ENST00000568794.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	2158.8043565826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGGTGAACCCCATCCA	-7	True	NA	NA	False	NA	NA	NA	85799682	85806805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801204_85801279_85804936_85805105_85805732_85805865_85806455
transcript_71188.known	chr16	+	490	5	FSM	ENSG00000131143.10	ENST00000566405.5	490	5	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	2226.43981504104	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAAGGTGAACCCCAT	8	True	NA	NA	False	NA	NA	NA	85799697	85806802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801204_85801279_85804940_85805105_85805732_85805865_85806737
transcript_7119.known	chr1	-	2628	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGAGTATGTGTTT	-10	True	NA	NA	False	AATAAA	-17	NA	35718884	35713876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35716327_35718706
transcript_71190.known	chr16	+	716	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2370.22629457611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	7	True	NA	31	True	AATAAA	-19	NA	85799696	85807002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
transcript_71191.known	chr16	+	873	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	2295.4336600085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	3	True	NA	-7	True	AATGAA	-6	NA	85799692	85807044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
transcript_71194.known	chr16	-	1966	5	FSM	ENSG00000131148.9	ENST00000253457.8	1966	5	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_3	32.2993807990184	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCTTCCCCTTTCTTC	6227	False	85799559	0	True	AATAAA	-24	NA	85799544	85778623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85779868_85780378_85780474_85781210_85781281_85788973_85789051_85799064
transcript_7120.nic	chr1	-	2223	11	ISM	ENSG00000092853.14	ENST00000318121.8	8512	25	-32	17645	-32	-2792	5prime_fragment	FALSE	canonical	2	78	junction_1	29.8529730512725	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGATAAAGAAAATAATGAT	NA	False	NA	NA	False	AATAGA	-21	NA	35770010	35749756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_71201.known	chr16	-	1935	4	FSM	ENSG00000131148.9	ENST00000435200.2	1935	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	322.015527575923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCTTCCCCTTTCTTC	6163	False	NA	0	True	AATAAA	-24	NA	85799608	85778623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85779868_85781210_85781281_85788973_85789051_85799064
transcript_71203.known	chr16	+	561	3	FSM	ENSG00000131143.10	ENST00000567241.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	2062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGAGGTAGCCTCTCAG	-2	True	NA	NA	False	NA	NA	NA	85799653	85805328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801204_85801279_85804940
transcript_71204.known	chr16	+	566	3	FSM	ENSG00000131143.10	ENST00000563774.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2605.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGCTGGGTAAGACATA	6	True	NA	NA	False	NA	NA	NA	85799695	85805350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801183_85801279_85804936
transcript_71205.known	chr16	-	486	2	FSM	ENSG00000131148.9	ENST00000596852.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGATACGAAACCTGTGA	6375	False	NA	NA	False	NA	NA	NA	85799396	85788896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85789051_85799064
transcript_71207.known	chr16	+	2668	9	FSM	ENSG00000140968.11	ENST00000268638.10	2668	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTACTGTATTTT	0	True	NA	5	True	AATAAA	-16	NA	85899161	85922606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85899224_85903014_85903190_85908989_85909174_85911569_85911659_85913130_85913237_85914472_85914521_85918416_85918804_85920108_85920225_85921105
transcript_71210.known	chr16	-	2451	9	FSM	ENSG00000103248.19	ENST00000546093.5	2451	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.2207570090254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCCCTGGGCCCTC	-21	True	NA	-2	True	AATAAA	-30	NA	86555235	86530832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548034_86548112_86548463_86548578_86552178_86552293_86554644_86554749_86555172
transcript_71213.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000634347.1	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	10.8194835592923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	11	True	NA	NA	False	NA	NA	NA	86555203	86531971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554749_86555168
transcript_71215.known	chr16	-	3028	8	FSM	ENSG00000103248.19	ENST00000360900.11	3028	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	12.3684918982362	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCACACCTTTCAC	-21	True	NA	-9	True	AATAAA	-15	NA	86555235	86530185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554752_86555168
transcript_71216.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000543303.6	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.8603170684879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	11	True	NA	NA	False	NA	NA	NA	86555203	86531971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554749_86555168
transcript_71217.known	chr16	-	1210	8	FSM	ENSG00000103248.19	ENST00000381214.9	1210	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	14.0494752607363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	11	True	NA	NA	False	NA	NA	NA	86555203	86531971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_71220.known	chr16	-	974	5	FSM	ENSG00000260456.7	ENST00000618367.4	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	13.7545447034789	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGACCTCTGATTTC	10	False	NA	0	True	AATAAA	-35	NA	87317420	87302800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317086
transcript_71226.nic	chr16	-	2110	12	Fusion	ENSG00000103264.18_ENSG00000260456.7	novel	1113	7	NA	NA	-54	0	multi-exon	FALSE	canonical	1	2	junction_4	20.7224874859006	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	8255	False	NA	-13	True	AATAAA	-22	NA	87383830	87302813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87333885_87334287_87335303_87335458_87336154_87336265_87342876_87342952_87343597_87343766_87347173_87347251_87360294_87360367_87383404
transcript_71230.known	chr16	-	5953	9	FSM	ENSG00000103264.18	ENST00000311635.12	5953	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	9.89870572347719	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGTTTTGTGATTT	-11	True	NA	-1	True	AGTAAA	-17	NA	87383776	87326986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87331511_87333885_87334287_87335303_87335458_87336154_87336265_87342876_87342952_87343597_87343766_87347173_87347251_87360294_87360367_87383404
transcript_71238.known	chr16	+	1259	5	FSM	ENSG00000140941.14	ENST00000570189.5	1259	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	476.73184286347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAACTTGAATAATTT	-14	True	NA	NA	False	CATAAA	-12	NA	87392316	87403778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87392468_87398814_87398871_87399597_87399687_87402174_87402282_87402922
transcript_7124.nic	chr1	-	877	4	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-82	26762	-32	-16202	5prime_fragment	FALSE	canonical	3	132	junction_1	19.1543438647449	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAGGCAAGTAAAGCAT	NA	False	NA	NA	False	AGTAAA	-4	NA	35770010	35763166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35763322_35764265_35764715_35765217_35765327_35769846
transcript_71240.known	chr16	+	2147	4	FSM	ENSG00000140941.14	ENST00000268607.10	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_2	24.4176620957499	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCCAGTTTAATGGG	5	True	NA	15	True	AATAAA	-21	NA	87392335	87404774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87392468_87398814_87398871_87402174_87402282_87402922
transcript_71243.known	chr16	+	401	2	FSM	ENSG00000270006.3	ENST00000602282.3	417	2	16	0	9	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGTTCTTTAAGTTA	0	True	NA	11	True	AGTAAA	-22	NA	87317508	87318043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87317723_87317856
transcript_71246.known	chr16	-	6242	14	FSM	ENSG00000140948.13	ENST00000568020.6	6242	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4.68157663221629	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGCTGTTTTATTTC	1162	False	NA	-20	True	AATAAA	-7	NA	87491859	87406256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87407015_87407677_87410336_87411515_87412977_87413054_87413196_87414413_87414542_87415275_87415368_87417459_87417743_87418846_87418902_87419782_87419878_87420606_87420717_87423809_87423882_87433127_87433202_87460007_87460132_87491668
transcript_7125.nic	chr1	-	718	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-82	27865	-32	-17305	5prime_fragment	FALSE	canonical	3	143	junction_1	17	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTACATTTTAAAGAAT	NA	False	NA	28	True	AAAAAG	-15	NA	35770010	35764269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_71252.known	chr16	-	1665	1	FSM	ENSG00000269935.1	ENST00000602388.1	1665	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTACTTTTCATTTCT	2545	False	NA	NA	False	AATAAA	-17	NA	87602190	87600525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87600500_87602200
transcript_71253.known	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	17.0453939392862	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-29	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_71254.known	chr16	-	1757	11	FSM	ENSG00000104731.14	ENST00000562155.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	43.7671109396085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATAAATTGGACTTG	28	True	NA	NA	False	NA	NA	NA	87765929	87707839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87761948_87762041_87765791
transcript_71255.known	chr16	-	1821	11	FSM	ENSG00000104731.14	ENST00000347925.9	1821	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.866778149231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-19	True	NA	NA	False	AATAAA	-18	NA	87765976	87707811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_7126.nic	chr1	-	651	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-82	27932	-32	-17372	5prime_fragment	FALSE	canonical	3	143	junction_1	17	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACTTGAGAAAGAGGAG	NA	False	NA	-39	True	AGTAAA	-9	NA	35770010	35764336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_7127.nic	chr1	-	438	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-82	28145	-32	-17585	5prime_fragment	FALSE	canonical	3	143	junction_1	17	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGGATTTACAAAACT	NA	False	NA	NA	False	AATAAA	-32	NA	35770010	35764549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_71270.known	chr16	-	4556	10	FSM	ENSG00000103257.9	ENST00000261622.5	4556	10	0	0	0	0	multi-exon	FALSE	canonical	3	2142	junction_1	165.434109071994	8106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGATGTTCTGTGTTCT	-2	True	NA	-8	True	AAGAAA	-16	NA	87869507	87830022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87833026_87834413_87834592_87836497_87836648_87837844_87837942_87838713_87838818_87839701_87839826_87840428_87840474_87841049_87841156_87851723_87851850_87868884
transcript_7129.known	chr1	+	13712	19	FSM	ENSG00000092847.13	ENST00000373204.6	13712	19	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	11.7779088043026	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCGATCTGATGTTTGT	3	True	NA	9	True	ATTAAA	-19	NA	35883208	35930532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35883447_35888426_35888611_35892556_35892678_35893096_35893279_35893673_35893811_35894036_35894172_35894314_35894403_35895121_35895270_35901473_35901594_35901947_35902071_35902203_35902338_35906934_35907120_35913841_35914002_35914183_35914275_35915347_35915543_35917592_35917728_35918321_35918424_35919054_35919255_35919498
transcript_71367.known	chr16	+	2398	14	FSM	ENSG00000172530.21	ENST00000682872.1	2398	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	36.3306641800465	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	-23	True	NA	15	True	AATAAA	-16	NA	87951433	88077316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_71370.nic	chr16	+	2096	14	NIC	ENSG00000172530.21	novel	2368	14	NA	NA	0	-185	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.4528004716241	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGGAGTAGCAGGAG	-25	True	NA	NA	False	AAAAAG	-19	NA	87951431	88077021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_71371.nic	chr16	+	2393	14	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.4528004716241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	-27	True	NA	15	True	AATAAA	-16	NA	87951429	88077316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_71381.nic	chr16	+	2041	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-2	-185	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	32.4305882702666	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGGAGTAGCAGGAG	-27	True	NA	NA	False	AAAAAG	-19	NA	87951429	88077021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_71382.nic	chr16	+	2362	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-28	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	32.4305882702666	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	916	False	NA	15	True	AATAAA	-16	NA	87951403	88077316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_71383.nic	chr16	+	2307	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-277	-185	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	22.1547587062765	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGGAGTAGCAGGAG	667	False	NA	NA	False	AAAAAG	-19	NA	87951154	88077021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_71384.nic	chr16	+	2323	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	22.1547587062765	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	-23	True	NA	15	True	AATAAA	-16	NA	87951433	88077316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_71387.known	chr16	+	2144	13	FSM	ENSG00000172530.21	ENST00000626016.2	2144	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	43.7879993707053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCAGCTCTCGGTTCCG	22	True	NA	-95	True	NA	NA	NA	87951478	88077206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975204_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_71389.nic	chr16	+	1979	13	NIC	ENSG00000172530.21	novel	2368	14	NA	NA	0	-185	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	33.0835432403081	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGGAGTAGCAGGAG	-25	True	NA	NA	False	AAAAAG	-19	NA	87951431	88077021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_7140.known	chr1	+	19660	19	FSM	ENSG00000126070.20	ENST00000373191.9	19660	19	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	25.5701045542168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTTGTGTGGTCATC	-8	True	NA	NA	False	AATAAA	-22	NA	35931104	36072500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_36004340_36004476_36008689_36008778_36008896_36009045_36009474_36009595_36013629_36013753_36013914_36014049_36027113_36027299_36034173_36034334_36036176_36036268_36039789_36039985_36040306_36040442_36043446_36043549_36054945_36055146_36055636
transcript_71402.known	chr16	+	2164	12	FSM	ENSG00000172530.21	ENST00000355022.8	2164	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	36.4170062897465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	30	True	NA	17	True	AATAAA	-18	NA	87951486	88077318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_71404.known	chr16	+	1551	12	FSM	ENSG00000172530.21	ENST00000479780.6	1551	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	27.0429716201749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGCCCATGGCACCAGG	-23	True	NA	NA	False	NA	NA	NA	87951433	88076661	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_71422.known	chr16	+	502	1	FSM	ENSG00000172530.21	ENST00000612301.1	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCTGTCATCATT	615	False	NA	20	True	ATTAAA	-21	NA	87952246	87952748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87952200_87952700
transcript_71423.nnic	chr16	-	1239	3	Antisense	novelGene_ENSG00000225614.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTTCTTTATGATA	NA	False	NA	-19	True	AATAAA	-12	NA	88430571	88423536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr16_-_88424317_88429963_88430123_88430271
transcript_71429.known	chr16	+	3211	19	FSM	ENSG00000158545.16	ENST00000452588.6	3211	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	62.0787035310723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTAAAAAAGAAAAAA	-1	True	NA	NA	False	NA	NA	NA	88570402	88631398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88587541_88587614_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_71436.nic	chr16	+	3574	19	NIC	ENSG00000158545.16	novel	3705	18	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	54.2027799842839	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGTCTCCTAAAATAAAA	NA	False	NA	12	True	NA	NA	NA	88570345	88631930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100_88631340_88631493
transcript_71443.known	chr16	+	3705	18	FSM	ENSG00000158545.16	ENST00000301011.10	3705	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	28.5202532297779	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	-1	True	NA	15	True	AATAAA	-16	NA	88570402	88631964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_7145.known	chr1	+	1035	6	FSM	ENSG00000126070.20	ENST00000397828.3	1035	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	23.7368911190998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAGGAGAAAAAACTAAT	-31	True	NA	NA	False	NA	NA	NA	35931081	35982652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_35982620
transcript_71472.nic	chr16	+	3375	16	NIC	ENSG00000158545.16	novel	3705	18	NA	NA	-57	0	intron_retention	FALSE	canonical	3	11	junction_6	58.0691541755747	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	NA	False	NA	15	True	AATAAA	-16	NA	88570345	88631964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_715.known	chr1	-	1036	8	FSM	ENSG00000184163.3	ENST00000330388.2	1036	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.33197251134017	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTGCCTTCGAGTGCTG	1	False	NA	-13	True	AATAAA	-16	NA	1246722	1242452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1246513
transcript_71500.known	chr16	+	1060	3	FSM	ENSG00000124391.5	ENST00000244241.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGAGGCCAACATTCA	0	True	NA	13	True	ATTAAA	-13	NA	88638571	88640468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88638648_88638980_88639310_88639813
transcript_71501.known	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2382	junction_1	134.6054976589	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-6	True	NA	-4	True	AATAAA	-17	NA	88651053	88643288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
transcript_71507.known	chr16	-	1006	5	FSM	ENSG00000051523.11	ENST00000566534.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	2382	junction_1	142.148689758295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCGGAGGCACCATCAAG	12	True	NA	NA	False	NA	NA	NA	88651035	88643513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88643572_88646115_88646839_88647100_88647176_88648044_88648115_88650955
transcript_71508.known	chr16	-	1415	5	FSM	ENSG00000051523.11	ENST00000569359.5	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	2481	junction_1	108.04484022849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCACCCTGCCGGGCTCA	538	False	NA	NA	False	NA	NA	NA	88651030	88645086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
transcript_71521.nic	chr16	-	2080	12	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	11	junction_11	240.348747991657	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	9031	False	NA	-10	True	AATAAA	-15	NA	88663160	88651939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88660519_88660638_88660747_88660842_88663010
transcript_71530.nic	chr16	-	2025	11	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	211.687883451085	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	8976	False	NA	-10	True	AATAAA	-15	NA	88663215	88651939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657145_88657248_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_71547.known	chr16	-	1799	10	FSM	ENSG00000167508.12	ENST00000301012.8	1799	10	0	0	0	0	multi-exon	TRUE	canonical	3	465	junction_4	48.883080463035	2838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	18	True	NA	-10	True	AATAAA	-15	NA	88663091	88651939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_7155.known	chr1	+	1490	10	FSM	ENSG00000092850.12	ENST00000207457.8	1490	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.69623074369749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	-6	True	NA	2	True	AATAAA	-15	NA	36084093	36088275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36084150_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
transcript_7158.nic	chr1	+	2047	9	NIC	ENSG00000092850.12	novel	1490	10	NA	NA	-10	0	intron_retention	FALSE	canonical	2	6	junction_2	5.9791303715507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	-16	True	NA	2	True	AATAAA	-15	NA	36084083	36088275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_36084150_36084869_36085078_36085162_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
transcript_71598.known	chr16	+	2446	4	FSM	ENSG00000260630.8	ENST00000669434.1	2446	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCAGCTGTCCCCCAT	-13	True	NA	11	True	AGTAAA	-11	NA	88663334	88675484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88673603
transcript_716.nnic	chr1	-	936	8	NNC	ENSG00000184163.3	novel	1036	8	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	7.46146563268605	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTGCCTTCGAGTGCTG	NA	False	NA	-13	True	AATAAA	-16	NA	1247276	1242452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1247167
transcript_71600.known	chr16	+	588	3	FSM	ENSG00000260630.8	ENST00000569786.6	1136	3	46	502	0	-502	multi-exon	FALSE	canonical	3	5	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGATTGTTTTCTGGT	21	True	NA	NA	False	NA	NA	NA	88663368	88672179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88663401_88671276_88671466_88671812
transcript_71602.nnic	chr16	-	1727	3	NNC	ENSG00000185669.6	novel	1740	3	NA	NA	546	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	27.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	536	False	NA	-11	True	AATAAA	-14	NA	88685961	88677687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_88678630_88681093_88681715_88685797
transcript_71603.known	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	5.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-10	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88678630_88681093_88681715_88686330
transcript_71604.known	chr16	+	2048	1	FSM	ENSG00000260630.8	ENST00000567997.1	2048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGAATTCTGCAACAGCTG	NA	False	NA	12	True	AATAAA	-13	NA	88685132	88687180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88685100_88687200
transcript_71611.known	chr16	-	1864	6	FSM	ENSG00000158717.11	ENST00000312838.9	1864	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_4	28.8762878500683	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGCAGCCTCGACTGG	-16	True	NA	-14	True	AATAAA	-14	NA	88706408	88696500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88697634_88698501_88698610_88698970_88699086_88699619_88699733_88701261_88701419_88706170
transcript_71621.known	chr16	-	8089	51	FSM	ENSG00000103335.22	ENST00000301015.14	8089	51	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_38	36.1532792426911	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCAGTCCCCCGTCCTTGC	-2	True	NA	1	True	ATTAAA	-33	NA	88785220	88715337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88715855_88715932_88716120_88716197_88716278_88716360_88716484_88716558_88716732_88716805_88716899_88717022_88717212_88719573_88719722_88719801_88719961_88720068_88720284_88720384_88720533_88720615_88720749_88721165_88721431_88721537_88721727_88721807_88722067_88722217_88722398_88722582_88722690_88722836_88723010_88723094_88723152_88723225_88723329_88723870_88723972_88725008_88725081_88725415_88725520_88725594_88725685_88726283_88726456_88726546_88726644_88726714_88726959_88727038_88727193_88727556_88727662_88731705_88731911_88732334_88732536_88732606_88732733_88733277_88733455_88733587_88733746_88733905_88734055_88734355_88734539_88734649_88734799_88734874_88735054_88735134_88735247_88736147_88736409_88736638_88736740_88737558_88737647_88737727_88737815_88737933_88738106_88738226_88738441_88738567_88738737_88741477_88741617_88742052_88742096_88742299_88742423_88749383_88749480_88784900
transcript_71629.known	chr16	+	1905	15	FSM	ENSG00000174177.13	ENST00000567949.5	1905	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	48.9750040368366	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	23	True	NA	6	True	AATAAA	-24	NA	88706521	88715386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712060_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_7163.known	chr1	+	1651	6	FSM	ENSG00000116863.11	ENST00000373178.5	1651	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	27.9971427113554	581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	-2	True	NA	13	True	AATAAA	-20	NA	36088891	36093932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36089116_36091243_36091341_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_71631.known	chr16	+	1721	15	FSM	ENSG00000174177.13	ENST00000453996.7	1721	15	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	23.6987901180888	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGGGGACGGCAGCGC	4	True	NA	16	True	AATAAA	-34	NA	88706502	88715396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_71634.known	chr16	+	1672	14	FSM	ENSG00000174177.13	ENST00000312060.9	1672	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	47.9817519554055	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	-16	True	NA	6	True	AATAAA	-24	NA	88706482	88715386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715181
transcript_71640.known	chr16	+	1586	14	FSM	ENSG00000174177.13	ENST00000564105.5	1586	14	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_2	50.0194045186702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGGGGGACTGGCCTCT	-16	True	NA	-60	True	NA	NA	NA	88706482	88715320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_71657.known	chr16	-	2884	7	FSM	ENSG00000103335.22	ENST00000484567.6	2884	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	17.2086864370552	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGAGGCCAGTCCCCC	6927	False	NA	-7	True	ATTAAA	-25	NA	88718741	88715345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88715855_88715932_88716120_88716197_88716278_88716360_88716484_88716558_88716732_88716805_88716899_88717022
transcript_71658.known	chr16	+	2664	10	FSM	ENSG00000167513.9	ENST00000301019.9	2664	10	0	0	0	0	multi-exon	TRUE	canonical	3	424	junction_1	50.3265877255628	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCAGAAGAGCCCTCG	-13	True	NA	18	True	AATAAA	-20	NA	88803788	88809258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88804060_88804544_88804668_88804761_88804899_88805439_88805638_88805723_88805870_88806020_88806122_88806485_88806675_88807050_88807204_88807280_88807483_88808114
transcript_71667.known	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2079.327941307	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	2	True	NA	-5	True	AGTAAA	-15	NA	88811925	88809468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_71675.known	chr16	-	931	5	FSM	ENSG00000198931.11	ENST00000378364.8	931	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1998.61958611438	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAACCCTCCAGGCACTG	-1	True	NA	NA	False	NA	NA	NA	88811928	88809338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809841_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_71683.known	chr16	-	542	4	FSM	ENSG00000198931.11	ENST00000568319.5	542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1912.83077023441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-10	True	NA	-5	True	AGTAAA	-15	NA	88811937	88809468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809707_88810069_88810149_88811549_88811657_88811819
transcript_71688.known	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2038.97343451715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-1	True	NA	-5	True	AGTAAA	-15	NA	88811928	88809468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
transcript_71695.known	chr16	-	515	3	FSM	ENSG00000198931.11	ENST00000562464.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTACCCTTCTTCTCT	2477	False	NA	NA	False	NA	NA	NA	88811880	88809735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809841_88810069_88810149_88811549
transcript_71699.known	chr16	-	584	2	FSM	ENSG00000198931.11	ENST00000564858.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	4633	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCCAGGGAAGGGAGGC	7	True	NA	NA	False	NA	NA	NA	88811920	88811173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88811657_88811819
transcript_71702.known	chr16	-	2344	14	FSM	ENSG00000141012.13	ENST00000268695.10	2344	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	11.8221535098081	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTGGCTGAGTGA	5	True	NA	-13	True	AATAAA	-34	NA	88856947	88813733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88837621_88837766_88840991_88841095_88841896_88841972_88842705_88842830_88856757
transcript_71705.nic	chr16	-	2247	13	NIC	ENSG00000141012.13	novel	2344	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	21.488207360214	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGGCTGAGT	-24	True	NA	-15	True	AATAAA	-32	NA	88856976	88813735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88837621_88837766_88840991_88841095_88841896_88841972_88856757
transcript_71710.known	chr16	-	1953	12	FSM	ENSG00000141012.13	ENST00000567525.5	1953	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	32.0286545259679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGGCTGAGT	9966	False	NA	-15	True	AATAAA	-32	NA	88856826	88813735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88840991_88841095_88841896_88841972_88856757
transcript_71715.known	chr16	+	1060	6	FSM	ENSG00000167515.10	ENST00000564365.5	1060	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	445.637700380028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCCTCCTCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	88856219	88861415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88856247_88858618_88858790_88859344_88859444_88859572_88859751_88859892_88859973_88860910
transcript_71717.nic	chr16	+	2433	6	NIC	ENSG00000167515.10	novel	1084	5	NA	NA	-42	2	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	494.853756174488	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGATTTTTGGGTTTT	NA	False	NA	14	True	AATAAA	-21	NA	88857043	88862678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_88857184_88858618_88858790_88859344_88859444_88859572_88859751_88859892_88859973_88860913
transcript_71728.known	chr16	+	915	5	FSM	ENSG00000167515.10	ENST00000564404.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	534.512102295168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGGCTTTTTCCTTC	11	True	NA	26	True	ACTAAA	-14	NA	88857143	88861110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860892
transcript_71729.known	chr16	+	1084	5	FSM	ENSG00000167515.10	ENST00000565205.5	1084	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	421.829645710208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGACCATGTGGGTC	-2	True	NA	NA	False	NA	NA	NA	88857130	88861287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860913
transcript_7173.known	chr1	+	3238	18	FSM	ENSG00000116871.16	ENST00000373150.8	3238	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	72.3162508597363	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	39	True	NA	15	True	AATAAA	-16	NA	36156197	36180849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176322_36176417_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_71734.known	chr16	+	801	5	FSM	ENSG00000167515.10	ENST00000568583.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	498.650365988034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGCTGAACAGGTGGG	8	True	NA	NA	False	NA	NA	NA	88857140	88861309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860892
transcript_71736.known	chr16	+	2215	5	FSM	ENSG00000167515.10	ENST00000301021.7	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_4	334.243455433311	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTCTGTTAGG	NA	False	NA	22	True	AATAAA	-29	NA	88857085	88862686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860910
transcript_71741.known	chr16	+	854	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	485.410650892623	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	88857085	88861351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
transcript_71748.known	chr16	+	499	4	FSM	ENSG00000167515.10	ENST00000567312.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	455.321376124113	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	2	True	NA	28	True	ACTAAA	-16	NA	88857134	88861112	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858790_88859892_88859973_88860913
transcript_71751.nic	chr16	+	3049	4	NIC	ENSG00000167515.10	novel	1084	5	NA	NA	14	2	intron_retention	FALSE	canonical	3	917	junction_3	118.974320291771	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGATTTTTGGGTTTT	-21	True	NA	14	True	AATAAA	-21	NA	88857111	88862678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_88857184_88858618_88859751_88859892_88859973_88860913
transcript_71756.known	chr16	-	703	3	FSM	ENSG00000141012.13	ENST00000568311.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTACTTCTGCTTTT	-18	True	NA	-7	True	AATAAA	-19	NA	88856970	88855127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88855523_88856206_88856302_88856757
transcript_71759.known	chr16	+	557	2	FSM	ENSG00000259881.1	ENST00000562574.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGCCCACGGGAGACGT	NA	False	NA	NA	False	NA	NA	NA	88881256	88883715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88881613_88883514
transcript_71774.known	chr16	+	4095	11	FSM	ENSG00000176715.17	ENST00000614302.5	4095	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	23.3957261054236	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTCTGGTGCTGAC	3	True	NA	NA	False	ATTAAA	-18	NA	89093851	89156233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_71779.known	chr16	+	2247	10	FSM	ENSG00000176715.17	ENST00000406948.7	2247	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.8506570848124	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	-19	True	NA	9	True	AAAACA	-24	NA	89093882	89154589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_71782.nic	chr16	+	2324	10	NIC	ENSG00000176715.17	novel	4095	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	32.2559210757412	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	NA	False	NA	8	True	AAAACA	-23	NA	89093828	89154588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_71785.known	chr16	+	1541	9	FSM	ENSG00000176715.17	ENST00000378345.8	1541	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	33.990577738544	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	-4	True	NA	8	True	AAAACA	-23	NA	89093897	89154588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89093993_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_71789.nic	chr16	+	1472	8	NIC	ENSG00000176715.17	novel	1541	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	38.6475439460417	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	NA	False	NA	8	True	AAAACA	-23	NA	89093821	89154588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89093997_89102603_89102760_89112091_89112247_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_71794.known	chr16	+	2866	14	FSM	ENSG00000129910.8	ENST00000289746.3	2866	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.45951276623156	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGGCGCCCACTGCCAC	-13	True	NA	NA	False	AATGAA	-25	NA	89171747	89195492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89171874_89179415_89179575_89180199_89180356_89183547_89183693_89185172_89185334_89187428_89187558_89188099_89188286_89190242_89190497_89191329_89191473_89191654_89191895_89192204_89192445_89193469_89193607_89193754_89193914_89194861
transcript_71804.known	chr16	-	1945	9	FSM	ENSG00000259803.8	ENST00000562855.7	1945	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	21.9882781272204	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCGTCCTCCCTGGTTC	26	False	NA	-5	True	GATAAA	-14	NA	89201651	89195760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89196306_89197297_89197410_89198121_89198337_89198441_89198551_89198651_89198798_89199022_89199192_89199412_89199568_89199712_89199817_89201261
transcript_71813.known	chr16	-	2443	1	FSM	ENSG00000259877.2	ENST00000570267.2	2443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTATAGGAGTTC	-2	True	NA	1	True	ATTAAA	-16	NA	89217653	89215210	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89215200_89217700
transcript_71814.known	chr16	+	11192	7	FSM	ENSG00000170100.14	ENST00000433976.7	11192	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	8.88350531415762	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTAAATAGCCTGAAAGA	-17	True	NA	NA	False	ATTAAA	-18	NA	89217702	89237141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89217911_89220996_89221153_89222091_89222184_89223156_89223284_89224718_89224803_89225554_89225632_89226693
transcript_7183.known	chr1	+	3324	17	FSM	ENSG00000116871.16	ENST00000373151.6	3324	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	101.110069200599	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCAATCCTGCCTGTT	43	True	NA	6	True	AATAAA	-7	NA	36156201	36180840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179511_36179558_36179665_36179757_36179873_36180068_36180247
transcript_71849.known	chr16	+	3216	18	FSM	ENSG00000197912.16	ENST00000646531.1	3216	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	217.892548357574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	1	True	NA	2	True	AATAAA	-2	NA	89508402	89557747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89545871_89546031_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71850.known	chr16	+	3367	18	FSM	ENSG00000197912.16	ENST00000645042.1	3367	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	213.195006336086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	1	True	NA	2	True	AATAAA	-2	NA	89508402	89557747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89545871_89546182_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71853.known	chr16	+	3266	18	FSM	ENSG00000197912.16	ENST00000645063.1	3266	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	220.158106131711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGTTGGAAAATCTACA	1	True	NA	3	True	AATAAA	-3	NA	89508402	89557748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89555877_89556086_89556886
transcript_71859.known	chr16	+	3748	17	FSM	ENSG00000197912.16	ENST00000643105.1	3748	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	165.81347766391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	96	False	NA	2	True	AATAAA	-2	NA	89508497	89557747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89545871_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_7186.nic	chr1	+	3205	17	NIC	ENSG00000116871.16	novel	3238	18	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_5	101.618695991437	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	-39	True	NA	15	True	AATAAA	-16	NA	36156119	36180849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36176198_36176322_36176417_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_71861.known	chr16	+	3076	17	FSM	ENSG00000197912.16	ENST00000645818.2	3076	17	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_9	58.206528843421	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCATTGTCTGGCCAG	1	True	NA	21	True	AATAAA	-21	NA	89508402	89557766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71862.known	chr16	+	4581	17	FSM	ENSG00000197912.16	ENST00000644225.1	4581	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	171.383604360948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	-1	True	NA	2	True	AATAAA	-2	NA	89508400	89557747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89556086_89556886
transcript_71863.known	chr16	+	3012	17	FSM	ENSG00000197912.16	ENST00000644781.1	3012	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	171.22426813977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	1	True	NA	2	True	AATAAA	-2	NA	89508402	89557747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89553023_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71866.known	chr16	+	3026	17	FSM	ENSG00000197912.16	ENST00000268704.7	3026	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	170.242061121804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGTAGTTGGAAAATC	8	True	NA	-1	True	NA	NA	NA	89508409	89557744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531924_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71871.known	chr16	+	2507	16	FSM	ENSG00000197912.16	ENST00000643649.1	2507	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	175.272283414501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGACGGAGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	89508366	89557272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71874.known	chr16	+	4168	16	FSM	ENSG00000197912.16	ENST00000645977.1	4168	16	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_8	55.9974602598685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATCTACATTTGCAT	1	True	NA	10	True	AATAAA	-10	NA	89508402	89557755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71878.known	chr16	+	2565	14	FSM	ENSG00000197912.16	ENST00000646589.1	2565	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	186.112233111124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	8	True	NA	2	True	AATAAA	-2	NA	89508409	89557747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_71887.known	chr16	+	2931	11	FSM	ENSG00000197912.16	ENST00000646958.1	2931	11	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_8	64.710509192866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCCTTGCCAAAGA	66	False	NA	NA	False	TTTAAA	-45	NA	89508467	89548336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002
transcript_71892.known	chr16	+	2288	10	FSM	ENSG00000197912.16	ENST00000341316.6	2288	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	205.01424220325	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCAGTGCTTGCCGTG	9	True	NA	14	True	AATAAA	-16	NA	89508410	89537721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89536764
transcript_71899.nic	chr16	+	1823	9	ISM	ENSG00000197912.16	ENST00000643307.1	1794	10	-17	4133	9	523	5prime_fragment	FALSE	canonical	3	584	junction_6	67.500810180323	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGCTTTTAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89508375	89533093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462
transcript_71908.known	chr16	+	1534	5	FSM	ENSG00000197912.16	ENST00000562775.2	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_4	36.8985094549902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCGGAGATACCTAGT	152	False	NA	NA	False	NA	NA	NA	89508553	89527380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328
transcript_71912.known	chr16	+	1632	2	FSM	ENSG00000197912.16	ENST00000568509.3	1632	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATCCTTAACAGTACT	-11	True	NA	NA	False	AATAAA	-18	NA	89490954	89499285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89491387_89498085
transcript_71917.known	chr16	+	2187	6	FSM	ENSG00000167526.14	ENST00000311528.10	2187	6	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	3343.70971228066	5389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	9	True	NA	30	True	AATACA	-20	NA	89560681	89564542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_71921.nic	chr16	+	596	5	ISM	ENSG00000167526.14	ENST00000311528.10	2187	6	-66	2149	-61	0	5prime_fragment	FALSE	canonical	3	8794	junction_1	3709.08307402247	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAACACTTACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	89560615	89562393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334
transcript_71922.known	chr16	+	924	5	FSM	ENSG00000167526.14	ENST00000484610.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	3466.06527636166	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCAGTCATGCTGGGTCT	6	True	NA	3	True	AATAAA	-25	NA	89560678	89563067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561752_89562334_89562392_89562883
transcript_71926.known	chr16	+	568	4	FSM	ENSG00000167526.14	ENST00000565571.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	3904.69412658946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAAACATTGTGGGTG	10	True	NA	NA	False	NA	NA	NA	89560682	89561849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577
transcript_71928.known	chr16	+	698	4	FSM	ENSG00000167526.14	ENST00000491523.5	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	4235.44459164429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAACACTTACTCAAAT	4	True	NA	NA	False	NA	NA	NA	89560676	89562393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561369_89561577_89561752_89562334
transcript_7193.known	chr1	+	3456	16	FSM	ENSG00000116871.16	ENST00000316156.8	3456	16	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	95.4511160519119	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	8	True	NA	15	True	AATAAA	-16	NA	36155964	36180849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36176198_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_71932.known	chr16	+	615	2	FSM	ENSG00000167526.14	ENST00000487034.5	615	2	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGGCTGGAGAAAGCCCG	9	True	NA	NA	False	NA	NA	NA	89560681	89561523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939
transcript_71933.known	chr16	+	2367	1	FSM	ENSG00000167526.14	ENST00000563749.1	2367	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCTGGGGACTTGGAA	4	True	NA	-21	True	AATAAA	-1	NA	89560676	89563043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560700_89563000
transcript_71934.known	chr16	+	712	6	FSM	ENSG00000167526.14	ENST00000567815.5	712	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6817.33034552382	5386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCCACGTGGTGTGT	8	True	NA	16	True	AATAAA	-38	NA	89560680	89563080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560953_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_71935.known	chr16	+	2385	5	FSM	ENSG00000167526.14	ENST00000393099.3	2385	5	0	0	0	0	multi-exon	FALSE	canonical	3	16055	junction_1	840.035267116804	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	-3	True	NA	30	True	AATACA	-20	NA	89560710	89564542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_71936.known	chr16	+	958	5	FSM	ENSG00000167526.14	ENST00000562879.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7024.13504906476	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCAGAGGTGAGGGATC	9	True	NA	47	True	AAGAAA	-43	NA	89560681	89563473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561064_89561595_89561752_89562334_89562392_89562883
transcript_71944.nic	chr16	+	2577	16	NIC	ENSG00000178773.15	novel	2442	15	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_14	16.9359578018684	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	-37	True	NA	20	True	AATAAA	-20	NA	89575716	89597246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89595830_89595925_89596483
transcript_71952.known	chr16	+	2442	15	FSM	ENSG00000178773.15	ENST00000319518.13	2442	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	14.2056686012367	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	4	True	NA	20	True	AATAAA	-20	NA	89575757	89597246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89596483
transcript_71962.nic	chr16	+	986	3	ISM	ENSG00000178773.15	ENST00000268720.9	2657	17	-51	17942	-41	-4410	5prime_fragment	FALSE	canonical	3	13	junction_2	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACGATAAAATGCATCA	-37	True	NA	NA	False	NA	NA	NA	89575716	89579304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89576072_89577538_89577722_89578856
transcript_71966.nic	chr16	+	714	2	ISM	ENSG00000178773.15	ENST00000525982.5	576	4	-65	5817	-41	-5817	5prime_fragment	FALSE	canonical	3	86	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTAATACATTCGTATG	-37	True	NA	NA	False	ATTAAA	-20	NA	89575716	89577897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89576072_89577538
transcript_71968.nic	chr16	+	1740	11	FSM	ENSG00000015413.10	ENST00000690203.1	1631	11	-112	3	-19	0	multi-exon	FALSE	canonical	2	4	junction_5	4.66476151587624	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	262	False	NA	3	True	AATAAA	-15	NA	89613529	89638430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_71972.known	chr16	+	1734	11	FSM	ENSG00000015413.10	ENST00000393092.7	1734	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.00333240792145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCCTGGGGTACGTGTC	-4	True	NA	2	True	AATAAA	-14	NA	89620591	89638429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89620777_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_71977.nic	chr16	+	1435	10	NIC	ENSG00000015413.10	novel	1631	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.32650704243856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	2	True	NA	3	True	AATAAA	-15	NA	89613624	89638430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89613720_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_71980.known	chr16	+	1772	9	FSM	ENSG00000015413.10	ENST00000564281.5	1772	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	4.63006479436303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGGCCCGCAATAAAAG	6	True	NA	-29	True	NA	NA	NA	89613672	89638398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637972_89638051
transcript_71981.nic	chr16	+	2215	8	NIC	ENSG00000015413.10	novel	1772	9	NA	NA	-19	0	intron_retention	FALSE	canonical	2	4	junction_5	4.13052351280027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	262	False	NA	3	True	AATAAA	-15	NA	89613529	89638430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89637381_89637467_89637972_89638051
transcript_71992.known	chr16	-	2330	7	FSM	ENSG00000131165.16	ENST00000535997.7	2330	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	189.290781603331	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTGTTGTAAATAAACA	-20	True	NA	-43	True	NA	NA	NA	89657713	89644470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646734_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_71993.known	chr16	-	2412	7	FSM	ENSG00000131165.16	ENST00000674799.1	2412	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	190.701701326676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTAGAATGCTGTTGTA	-32	True	NA	-51	True	NA	NA	NA	89657725	89644478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89654021_89657581
transcript_71994.known	chr16	-	2300	7	FSM	ENSG00000131165.16	ENST00000675536.1	2300	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	194.505712569637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCCTAGAATGCTGT	34	True	NA	-55	True	NA	NA	NA	89657659	89644482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649553_89651568_89651647_89653903_89653924_89657581
transcript_71995.known	chr16	-	803	7	FSM	ENSG00000131165.16	ENST00000550102.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	196.524807594359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGGTCTGTGTCCTGG	-2	True	NA	NA	False	NA	NA	NA	89657650	89645888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649377_89649498_89651568_89651647_89653903_89653924_89657581
transcript_71997.known	chr16	-	2550	6	FSM	ENSG00000131165.16	ENST00000675909.1	2550	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	181.326887140325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAGTACATGGTCTC	NA	False	NA	NA	False	TTTAAA	-13	NA	89657738	89644236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89657581
transcript_71998.known	chr16	-	1845	6	FSM	ENSG00000131165.16	ENST00000675778.1	1845	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	210.70681052116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCGTGGGTGTTAC	0	True	NA	NA	False	NA	NA	NA	89657693	89644769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89651568_89651647_89653903_89653924_89657581
transcript_71999.known	chr16	-	2797	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	38.2591165606317	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	18	True	NA	-7	True	AATAAA	-19	NA	89657675	89644434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_7200.known	chr1	-	1056	5	FSM	ENSG00000054116.12	ENST00000373162.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	190.810115035865	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGCGATATAGTCCAT	-11	True	NA	-27	True	AATAAA	-4	NA	36149497	36137053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149091
transcript_72001.known	chr16	+	2190	3	FSM	ENSG00000167523.15	ENST00000301031.8	2190	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAAGC	-15	True	NA	NA	False	NA	NA	NA	89657801	89671267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89657836_89658247_89658422_89669285
transcript_72004.nic	chr16	+	1281	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	-16	0	intron_retention	FALSE	canonical	3	12	junction_2	34.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	-31	True	NA	-4	True	NA	NA	NA	89657785	89661483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89657949_89658247_89658422_89660539
transcript_72005.known	chr16	+	1297	3	FSM	ENSG00000167523.15	ENST00000457689.3	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCCACCCTGTGAG	21	True	NA	NA	False	NA	NA	NA	89657837	89670297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89657949_89658247_89658422_89669285
transcript_72008.known	chr16	+	2368	2	FSM	ENSG00000167523.15	ENST00000565890.1	2368	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTGAAA	12	True	NA	NA	False	NA	NA	NA	89657828	89671272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89658210_89669285
transcript_7201.known	chr1	-	1282	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_2	27.0416345659799	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	0	True	NA	0	True	AATAAA	-26	NA	36149486	36136571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
transcript_72010.known	chr16	+	1546	2	FSM	ENSG00000167523.15	ENST00000611218.1	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGGCTCTGCAGAG	-5	True	NA	9	True	AATAAA	-19	NA	89658046	89670456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89658422_89669285
transcript_72049.known	chr16	+	1767	13	FSM	ENSG00000185324.22	ENST00000353379.12	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	77.4078304968058	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	3	True	NA	27	True	GATAAA	-16	NA	89686688	89696354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_72064.nic	chr16	+	1759	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	89.3144802867312	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	26	True	GATAAA	-15	NA	89686657	89696353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_72065.known	chr16	+	1424	13	FSM	ENSG00000185324.22	ENST00000505473.5	1424	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_12	124.218529437261	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAGGACAAGAGGGACA	-16	True	NA	NA	False	NA	NA	NA	89686669	89696164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_7208.known	chr1	+	945	3	FSM	ENSG00000116871.16	ENST00000527764.1	945	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGGGAGACTGAGATAGGA	16	True	NA	NA	False	AATACA	-45	NA	36156174	36171823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36156464_36170970_36171316_36171512
transcript_7210.known	chr1	-	1114	3	FSM	ENSG00000054116.12	ENST00000616074.4	1114	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	6437	False	NA	2	True	AATAAA	-28	NA	36149514	36136569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36137795_36137979_36149336
transcript_72108.nic	chr16	+	2219	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	191	junction_1	76.5260178302692	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	-18	True	NA	26	True	GATAAA	-15	NA	89686667	89696353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694789_89694930_89695071_89695292_89695346_89695594
transcript_72120.known	chr16	+	1703	12	FSM	ENSG00000185324.22	ENST00000505733.5	1703	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	120.88598548882	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	4	True	NA	27	True	GATAAA	-16	NA	89686689	89696354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_72129.nic	chr16	+	2191	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	132	junction_1	90.0010100953418	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	26	True	GATAAA	-15	NA	89686657	89696353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694789_89694930_89695071_89695292_89695346_89695594
transcript_7213.known	chr1	-	221	2	FSM	ENSG00000054116.12	ENST00000469757.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCGGATGAGATTCATC	-10	True	NA	NA	False	NA	NA	NA	36149496	36137261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36149336
transcript_72141.nic	chr16	+	1830	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	132	junction_1	88.6813405699827	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	26	True	GATAAA	-15	NA	89686657	89696353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_72150.known	chr16	+	1376	12	FSM	ENSG00000185324.22	ENST00000510811.6	1376	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	115.485536284459	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGGTGGACGCTGGC	5	True	NA	NA	False	NA	NA	NA	89686690	89696038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686798_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_7216.known	chr1	+	4405	12	FSM	ENSG00000054118.15	ENST00000354618.10	4405	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	161.828396000412	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	-8	True	NA	20	True	AATAAA	-24	NA	36224442	36305357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_72201.known	chr16	+	2532	11	FSM	ENSG00000185324.22	ENST00000472018.5	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	78.4841385249274	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	14	True	NA	27	True	GATAAA	-16	NA	89686699	89696354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_7231.known	chr1	+	3825	14	FSM	ENSG00000054118.15	ENST00000648638.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	238.648264361676	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	-18	True	NA	20	True	AATAAA	-24	NA	36224432	36305357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36224506_36225411_36225464_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795_36303832_36304473
transcript_7235.nic	chr1	+	1373	5	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-57	16219	-46	-5031	5prime_fragment	FALSE	canonical	0	0	junction_4	236.631966352815	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGGGAGCTTCTCTGA	NA	False	NA	68	True	AATAAA	-2	NA	36224385	36289138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059
transcript_72363.known	chr16	-	692	3	FSM	ENSG00000158792.16	ENST00000569918.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	45.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCAGGCACGGCGT	63	False	NA	NA	False	NA	NA	NA	89701640	89698067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89698306_89700929_89701234_89701490
transcript_72365.known	chr16	-	2331	3	FSM	ENSG00000158792.16	ENST00000289805.10	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	3.5	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTTAAAAAAGCTTTT	-2	True	NA	-11	True	ATTAAA	-15	NA	89701705	89696356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89698306_89700929_89701234_89701627
transcript_72368.nic	chr16	-	2097	2	ISM	ENSG00000158792.16	ENST00000289805.10	2331	3	-339	3197	-339	-1486	5prime_fragment	FALSE	canonical	3	106	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTCACCCTTCTACCG	NA	False	NA	NA	False	NA	NA	NA	89702044	89699553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_89701234_89701627
transcript_72374.known	chr16	-	4601	43	FSM	ENSG00000187741.15	ENST00000568369.5	4601	43	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	47.3160898455974	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGGCTACTTGAGCC	-3	True	NA	-5	True	AATAAA	-17	NA	89816646	89738402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89738709_89738881_89738975_89739128_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_72390.nic	chr16	-	4418	42	NIC	ENSG00000187741.15	novel	4601	43	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	50.8704481847053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTAGTGGGGAAAGGAA	NA	False	NA	-40	True	AAAAAG	-22	NA	89816684	89738494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_89738709_89738881_89738975_89739128_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_7240.nnic	chr1	+	1247	4	NIC	ENSG00000054118.15	novel	4405	12	NA	NA	-23	-5031	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	265.918533890864	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGGGAGCTTCTCTGA	12	False	NA	68	True	AATAAA	-2	NA	36224408	36289138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_36224506_36282532_36282701_36286367_36287271_36289059
transcript_72404.known	chr16	-	2660	15	FSM	ENSG00000075399.14	ENST00000389386.8	2660	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	12.9104055485709	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCCGTGTGGCTCCCTC	8	True	NA	-6	True	AATAAA	-16	NA	89720898	89707133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709907_89710585_89711011_89711326_89711413_89711881_89711970_89712046_89712100_89712459_89712523_89712604_89712717_89716461_89716625_89716729_89716823_89719026_89719103_89720762
transcript_72414.known	chr16	+	2206	11	FSM	ENSG00000158805.12	ENST00000568295.5	2206	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.9837389824712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTGGTGTGCAGTGG	-7	True	NA	8	True	AATAAA	-15	NA	89721572	89738571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89721846_89722530_89722835_89723136_89723184_89723259_89723710_89727278_89727326_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805_89737906_89737975
transcript_72415.known	chr16	+	4628	11	FSM	ENSG00000158805.12	ENST00000443381.7	4628	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTGACACATTCCTCT	-10	True	NA	NA	False	ATTAAA	-24	NA	89721536	89740925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89721846_89722530_89722835_89723136_89723184_89723259_89723710_89727278_89727358_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805_89737906_89737975
transcript_72423.known	chr16	+	4589	11	FSM	ENSG00000158805.12	ENST00000289816.9	4589	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	11.5325625946708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGCTGTCATTCTA	16	False	NA	NA	False	AATAAA	-27	NA	89720984	89740903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89721277_89722530_89722835_89723136_89723184_89723259_89723710_89727278_89727358_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805_89737906_89737975
transcript_72426.known	chr16	-	1088	11	FSM	ENSG00000187741.15	ENST00000534992.5	1088	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	64.8448147502944	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCTGCACCAATGTT	-12	True	NA	NA	False	NA	NA	NA	89816655	89798918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89799080_89799171_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_72428.known	chr16	+	2203	10	FSM	ENSG00000158805.12	ENST00000568064.5	2203	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	13.7472780695303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGCAACAAGAGCTCCAT	-2	True	NA	-43	True	ACTAAA	-30	NA	89721006	89738520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89721277_89722530_89722835_89723136_89723184_89723278_89723710_89727278_89727326_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805
transcript_72431.known	chr16	-	1694	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	20.5882622678524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATAAAGCACTGTGT	8	True	NA	-34	True	ATTAAA	-32	NA	89816635	89798384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_72435.nic	chr16	-	1955	8	NIC	ENSG00000075399.14	novel	2791	14	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	10.3509833901353	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCCGTGTGGCTCCCTC	9777	False	NA	-6	True	AATAAA	-16	NA	89711677	89707133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709907_89710585_89711011_89711326_89711413_89711598
transcript_72437.nic	chr16	-	2127	7	ISM	ENSG00000075399.14	ENST00000561976.5	2791	14	7706	0	-19	0	3prime_fragment	FALSE	canonical	3	24	junction_5	7.40307743817094	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCCGTGTGGCTCCCTC	9791	False	NA	-6	True	AATAAA	-16	NA	89711663	89707133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709907_89710585_89711011_89711326
transcript_72446.known	chr16	+	1753	4	FSM	ENSG00000261373.1	ENST00000562866.1	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.1937739383873	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTCTCCTTGCCAGTT	5	True	NA	10	True	NA	NA	NA	89711855	89718165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89712223_89712688_89712819_89716470_89716905_89717343
transcript_7245.known	chr1	+	2544	16	FSM	ENSG00000214193.11	ENST00000453908.8	2544	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	6.05530070819498	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCCTGCGCGCGGCTA	6	True	NA	25	True	NA	NA	NA	36306367	36321347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36306425_36306597_36306756_36306841_36306906_36307166_36307286_36307516_36307608_36307769_36307826_36307917_36307964_36308108_36308210_36308388_36308476_36309547_36309591_36319070_36319165_36319259_36319313_36319441_36319537_36319674_36320799_36320914_36320979_36321055
transcript_72454.known	chr16	-	5452	43	FSM	ENSG00000187741.15	ENST00000389301.8	5452	43	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	54.1566605095903	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGATTCTTGTCTTTTT	-4	True	NA	-6	True	AAGAAA	-23	NA	89816647	89737548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89738709_89738881_89738975_89739132_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_72467.known	chr16	+	3268	15	FSM	ENSG00000204991.11	ENST00000378247.8	3268	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	4.77877962390792	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGGATGTGCGCT	-8	True	NA	5	True	AATAAA	-16	NA	89828474	89871319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89863475_89863611_89863793_89863862_89868188_89868217_89869566_89869683_89870049
transcript_72472.known	chr16	+	2172	13	FSM	ENSG00000204991.11	ENST00000393062.6	2172	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_12	9.3760184631976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATATTTATATACAC	16	False	NA	12	True	AATATA	-9	NA	89828498	89870391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89863475_89863611_89863793_89863862_89870049
transcript_72480.known	chr16	+	2377	19	FSM	ENSG00000141002.20	ENST00000263347.11	2377	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	98.3242305893499	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCCGCACCTTCTCCT	-2	True	NA	37	True	TATAAA	-19	NA	89873585	89911384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909084_89910590_89910664_89911079
transcript_72481.nic	chr16	+	2414	19	NIC	ENSG00000141002.20	novel	2377	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	93.1241041053931	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTCTGCCGTCCGCACCT	NA	False	NA	31	True	TATAAA	-13	NA	89873566	89911378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909108_89910590_89910664_89911079
transcript_72497.known	chr16	+	2248	18	FSM	ENSG00000141002.20	ENST00000263346.13	2248	18	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_7	36.9005959198324	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	4	True	NA	32	True	TATAAA	-14	NA	89873591	89911379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_725.known	chr1	-	1256	8	FSM	ENSG00000160087.21	ENST00000464036.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	231.886671827918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCTTTGGAGGAGAC	-20	True	NA	NA	False	TTTAAA	-34	NA	1273864	1255047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1262268_1262391_1263345_1263387_1267861_1267993_1273665
transcript_72503.nic	chr16	+	2294	18	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	-70	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_7	79.9691549532983	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTCTGCCGTCCGCACCT	NA	False	NA	31	True	TATAAA	-13	NA	89873499	89911378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895082_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_72529.nic	chr16	+	2208	17	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	87.4578246570883	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTCTGCCGTCCGCACCT	NA	False	NA	31	True	TATAAA	-13	NA	89873564	89911378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_7256.known	chr1	-	980	3	FSM	ENSG00000142694.7	ENST00000490466.2	980	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCTCCCTCTGTTA	460	False	36323661	-1	True	AAGAAA	-17	NA	36323645	36322029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36322726_36322970_36323068_36323458
transcript_72571.known	chr16	+	806	5	FSM	ENSG00000258947.8	ENST00000557490.5	806	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	371.516823306832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCAGACACGGTGGTG	2	True	NA	NA	False	NA	NA	NA	89923344	89934971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89923459_89932570_89932680_89933138_89933368_89933467_89933579_89934728
transcript_72572.known	chr16	+	925	5	FSM	ENSG00000258947.8	ENST00000556536.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	387.533546934972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGACATCTGCTTCCGC	-1	True	NA	NA	False	NA	NA	NA	89923341	89935070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934329_89934576_89934728
transcript_72576.known	chr16	+	1706	4	FSM	ENSG00000258947.8	ENST00000315491.12	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	35.5902608401044	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGCCAGAGATGTCC	-1	True	NA	35	True	AATAAA	-23	NA	89923341	89936097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934728
transcript_72578.nic	chr16	+	488	3	ISM	ENSG00000141002.20	ENST00000614813.4	2047	6	-75	6020	-4	0	5prime_fragment	FALSE	canonical	3	359	junction_1	17	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	89873565	89884613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89873860_89883350_89883513_89884581
transcript_72581.known	chr16	+	736	3	FSM	ENSG00000258947.8	ENST00000553967.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	40	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTCTGTGTCCTGGGGCG	23	False	NA	NA	False	NA	NA	NA	89923365	89934001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89923459_89932570_89932680_89933467
transcript_72582.known	chr16	+	981	2	FSM	ENSG00000141002.20	ENST00000561585.1	981	2	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAACGTGCCTTTGCCCCC	4	True	NA	NA	False	NA	NA	NA	89873591	89884063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89873860_89883350
transcript_72583.known	chr16	+	2111	1	FSM	ENSG00000258839.4	ENST00000555147.2	2111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGCCCCTTCCAGAAAG	-5	True	NA	6	True	AATAAA	-20	NA	89918861	89920972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89918900_89921000
transcript_72584.known	chr16	+	1978	4	FSM	ENSG00000258947.8	ENST00000554444.5	1978	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	370.214352323984	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGCTTGGTGCCAGAG	1999	False	NA	29	True	AATAAA	-17	NA	89921850	89936091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89922246_89932570_89932680_89933467_89933579_89934728
transcript_72587.known	chr16	+	3620	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	163.028861623402	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	-11	True	NA	5	True	ATTAAA	-14	NA	89948754	89968060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_72588.known	chr16	+	1767	13	FSM	ENSG00000140995.17	ENST00000563795.1	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	166.343520062149	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAGAAATTCCACAGCTC	37	False	NA	NA	False	NA	NA	NA	89948802	89966306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964220_89964311_89964465_89964576_89965860
transcript_72589.known	chr16	+	3549	13	FSM	ENSG00000140995.17	ENST00000570182.5	3549	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	149.435860451529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGTGTGTGTGGTG	29	True	NA	4	True	ATTAAA	-13	NA	89948794	89968059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957540_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_72597.nic	chr16	+	3676	12	NIC	ENSG00000140995.17	novel	3620	13	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	164.702185526955	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	NA	False	NA	5	True	ATTAAA	-14	NA	89948601	89968060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_72604.known	chr16	+	612	6	FSM	ENSG00000140995.17	ENST00000561784.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	205.896478843131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGCACCGCTTTTACA	-11	True	NA	NA	False	NA	NA	NA	89948754	89959048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957472_89957661_89959013
transcript_72605.known	chr16	+	852	6	FSM	ENSG00000140995.17	ENST00000418391.6	852	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	175.302025088132	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	29	True	NA	NA	False	ATTAAA	-14	NA	89948794	89959366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_72606.known	chr16	+	549	6	FSM	ENSG00000140995.17	ENST00000566820.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.022498783185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCACCGCTTTTACAAG	-11	True	NA	NA	False	NA	NA	NA	89948754	89959050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957537_89957661_89959013
transcript_72607.known	chr16	+	516	6	FSM	ENSG00000140995.17	ENST00000566079.5	516	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	242.378711936507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGTGCTCCTTGAGCACC	-11	True	NA	NA	False	NA	NA	NA	89948754	89959039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949419_89949514_89954288_89954377_89955168_89955267_89957510_89957661_89959013
transcript_72608.known	chr16	+	580	6	FSM	ENSG00000140995.17	ENST00000561741.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	248.073859969163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACAAGTGTAACACCAT	9	True	NA	NA	False	NA	NA	NA	89948774	89959097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949564_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_7261.known	chr1	-	3846	12	FSM	ENSG00000196182.11	ENST00000373129.7	3846	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	56.3744857593229	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTGCGTCTCCTGCC	651	False	NA	-4	True	AATAAA	-21	NA	36385884	36339623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36367847_36368085_36385722
transcript_72611.known	chr16	+	816	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	133.507256357098	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	89948730	89959363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_72615.known	chr16	+	535	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	12	True	NA	NA	False	ATTAAA	-13	NA	89958350	89959365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89958534_89959013
transcript_72616.known	chr16	-	2744	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAAAGCTCATATA	273	False	NA	-25	True	ATTAAA	-17	NA	89972534	89969790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89969800_89972500
transcript_72623.nic	chr16	+	833	6	ISM	ENSG00000223959.9	ENST00000557444.5	2447	17	-50	15969	0	0	5prime_fragment	FALSE	canonical	3	26	junction_2	10.1980390271856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTACTCGTTAATGTGT	-27	True	NA	16	True	AGTAAA	-19	NA	89972580	89984699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89972766_89977638_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_72624.nic	chr16	+	1330	6	ISM	ENSG00000223959.9	ENST00000557444.5	2447	17	-50	15472	0	495	5prime_fragment	FALSE	canonical	3	26	junction_2	10.1980390271856	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAAAGGCACACCCCAG	-27	True	NA	NA	False	AAAAAG	-11	NA	89972580	89985196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89972766_89977638_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_72632.known	chr16	+	494	2	FSM	ENSG00000223959.9	ENST00000450026.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTTCCATATCGAGCC	-19	True	NA	NA	False	NA	NA	NA	89972588	89977955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89972766_89977638
transcript_7264.known	chr1	-	3645	11	FSM	ENSG00000196182.11	ENST00000373132.4	3645	11	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	18.5916647990437	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTGGCCTGCGTCTCC	-14	True	NA	-8	True	AATAAA	-17	NA	36385924	36339627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36385722
transcript_72641.nic	chr16	+	3320	11	NIC	ENSG00000141013.17	novel	1687	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	7	junction_2	27.2325173276361	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	-11	True	NA	14	True	TATAAA	-16	NA	90019620	90044960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_90019769_90027635_90027723_90031175_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_72644.nic	chr16	+	3295	11	NIC	ENSG00000141013.17	novel	1687	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	13	junction_2	25.9555389079094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	0	True	NA	14	True	TATAAA	-16	NA	90019631	90044960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_90019769_90027635_90027723_90031189_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_72647.known	chr16	+	1687	11	FSM	ENSG00000141013.17	ENST00000536122.7	1687	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	21.910956163527	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCATCCTCTTTCCTGG	11	True	NA	10	True	AATGAA	-16	NA	90019642	90043472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90019769_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_72652.known	chr16	+	3308	11	FSM	ENSG00000141013.17	ENST00000620723.4	3308	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	30.2813473940642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTGTGGTTTTCACTT	77	False	NA	25	True	TATAAA	-27	NA	90022599	90044971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90022725_90027635_90027723_90031175_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_72655.known	chr16	+	3094	11	FSM	ENSG00000141013.17	ENST00000268699.9	3094	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.8302148655407	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	7	True	NA	14	True	TATAAA	-16	NA	90022679	90044960	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90022725_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_72678.known	chr16	-	2056	4	FSM	ENSG00000003249.15	ENST00000002501.11	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_3	25.6645020732269	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	0	True	NA	-7	True	ATTAAA	-20	NA	90019456	90004870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019310
transcript_72679.known	chr16	-	2073	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	311.14412523245	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-26	True	NA	-7	True	ATTAAA	-20	NA	90019890	90004870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
transcript_7268.nnic	chr1	-	3666	11	NNC	ENSG00000196182.11	novel	3645	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	46.504730942131	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTGGCCTGCGTCTCC	-14	True	NA	-8	True	AATAAA	-17	NA	36385924	36339627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361362_36385722
transcript_72680.known	chr16	-	398	4	FSM	ENSG00000222019.7	ENST00000610227.1	398	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAAGACTGGCAGCGGGA	NA	False	NA	NA	False	NA	NA	NA	90047597	90043913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047537
transcript_72681.known	chr16	-	2889	1	FSM	ENSG00000003249.15	ENST00000623401.1	2889	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGGCCACAGTCTCT	1237	False	NA	-9	True	ATTAAA	-18	NA	90007761	90004872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90004900_90007800
transcript_72682.known	chr16	+	1906	4	FSM	ENSG00000260528.6	ENST00000663989.1	1906	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	7.36357401145817	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTGGTCTGTGCTT	4261	False	NA	NA	False	AATAAA	-13	NA	90106528	90120883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90106706_90111371_90111486_90116287_90116484_90119464
transcript_72686.nic	chr17	-	2554	10	NIC	ENSG00000181031.16	novel	2719	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	16.2480768092719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	NA	False	NA	-32	True	ATTAAA	-17	NA	386240	212501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_333758_333935_386196
transcript_72687.known	chr17	-	2578	9	FSM	ENSG00000181031.16	ENST00000618002.4	2578	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	15.8094117537624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCAGTGAAAGGAGGGGC	NA	False	NA	81	True	NA	NA	NA	352842	212388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_352711
transcript_72688.nic	chr17	-	2426	9	NIC	ENSG00000181031.16	novel	2578	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	15.0369336967349	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	NA	False	NA	-32	True	ATTAAA	-17	NA	386288	212501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_386196
transcript_72698.known	chr17	-	880	2	FSM	ENSG00000181031.16	ENST00000572965.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCCAGGACCGTGGG	NA	False	NA	NA	False	NA	NA	NA	215933	213323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_213924_215653
transcript_72699.known	chr17	+	1841	2	FSM	ENSG00000187624.9	ENST00000360127.7	1841	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCCATTATAAAAAGCCT	-31	True	NA	NA	False	CATAAA	-17	NA	410324	414666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_410647_413147
transcript_72702.known	chr17	-	3621	2	FSM	ENSG00000183688.4	ENST00000329099.4	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGAGATGCTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	445939	439977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_443495_445835
transcript_72704.known	chr17	-	6682	22	FSM	ENSG00000141252.21	ENST00000681661.1	6682	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	12.96480496577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACTCTGCTCTTACTG	7	True	NA	-22	True	AATAAA	-28	NA	714828	515058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_519299_519825_519931_521600_521739_532841_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623670_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_7271.nnic	chr1	-	3509	10	NIC	ENSG00000196182.11	novel	3645	11	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_9	46.8448977418507	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTGGCCTGCGTCTCC	2	True	NA	-8	True	AATAAA	-17	NA	36385908	36339627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36385722
transcript_72710.known	chr17	-	2695	18	FSM	ENSG00000141252.21	ENST00000291074.10	2695	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	12.3856709261411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	-22	True	NA	NA	False	NA	NA	NA	714857	532292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
transcript_72718.known	chr17	-	2939	7	FSM	ENSG00000141252.21	ENST00000576019.6	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.0657918651588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCGGATTTGTGTGTG	26	True	NA	NA	False	CATAAA	-19	NA	714809	651059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_72720.known	chr17	-	1369	3	FSM	ENSG00000141252.21	ENST00000571456.2	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTGATTGTCTTT	21	True	NA	1	True	AATAAA	-14	NA	714814	704999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_706096_710532_710614_714622
transcript_72727.known	chr17	+	2224	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.6631167472837	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	7	True	NA	5	True	ATTAAA	-19	NA	732595	742968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
transcript_72732.known	chr17	+	2013	4	FSM	ENSG00000167695.15	ENST00000301324.8	2013	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	59.1739432145227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTCTTTAATGGGT	-5	True	NA	8	True	NA	NA	NA	732583	742841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_732770_733097_733182_737845_738048_741300
transcript_72737.known	chr17	+	373	3	FSM	ENSG00000167695.15	ENST00000572018.5	373	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	62.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGATCCTTCTCTTCC	60	False	NA	NA	False	NA	NA	NA	732545	741365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_732770_733097_733182_741300
transcript_72745.known	chr17	-	1015	3	FSM	ENSG00000179409.11	ENST00000573482.5	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGGAGGCAGAACGGGA	607	False	NA	NA	False	NA	NA	NA	752185	747166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_748033_749813_749910_752132
transcript_7275.nic	chr1	-	2006	7	ISM	ENSG00000196182.11	ENST00000373132.4	3645	11	-3	8018	-3	7559	5prime_fragment	FALSE	canonical	3	132	junction_2	12.8840987267251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATAAAGTTACTGCCCAC	-17	True	NA	NA	False	AAAAAG	-12	NA	36385927	36347645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36385722
transcript_72750.known	chr17	-	3744	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGAGTTATTTCGTCTT	8	True	NA	-10	True	AAAAAG	-25	NA	752264	744420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_748033_752132
transcript_72754.known	chr17	-	1809	10	FSM	ENSG00000167699.14	ENST00000301328.9	1809	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	386.324305649803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGAAATCAAGCTGTG	1	True	NA	-20	True	AATAAA	-17	NA	782279	759329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778621_778662_780683_780739_782165
transcript_72763.known	chr17	-	2059	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-233	-47	226	multi-exon	FALSE	canonical	3	771	junction_5	28.6792607994	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATGCTATTATACCTT	NA	False	NA	NA	False	NA	NA	NA	782341	759096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
transcript_72773.nic	chr17	-	586	5	ISM	ENSG00000167699.14	ENST00000576419.1	705	7	-75	11193	-60	70	5prime_fragment	FALSE	canonical	3	771	junction_1	27.8478006312886	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTATGAAAAAGATGAAGAA	NA	False	NA	-5	True	AATGAA	-3	NA	782354	771380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_771462_775774_775920_776867_776989_778694_778745_782165
transcript_72776.known	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	31.2836485510668	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	-9	True	NA	27	True	AATAAA	-23	NA	782352	792509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_782693_783082_783328_787964_788133_791533
transcript_72779.known	chr17	+	572	3	FSM	ENSG00000171861.11	ENST00000571157.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	35	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGTCACTTGAGCCCA	198	False	NA	NA	False	NA	NA	NA	782599	788198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_782693_783082_783328_787964
transcript_72781.known	chr17	+	727	3	FSM	ENSG00000171861.11	ENST00000574509.1	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	85.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGATGTAGAAAC	5	True	NA	NA	False	NA	NA	NA	782366	791766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_782693_787964_788133_791533
transcript_72782.known	chr17	+	770	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGTGGGGTTTCACCA	-4	True	NA	NA	False	NA	NA	NA	782357	783517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_782693_783082
transcript_72786.known	chr17	-	3045	8	FSM	ENSG00000167693.17	ENST00000336868.8	3045	8	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_5	21.9925775976295	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTGCTTGTGGTCC	-15	True	NA	-3	True	NA	NA	NA	979776	799309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_801132_803681_803807_805067_805248_819438_819546_822356_822458_823631_823766_825960_826079_979318
transcript_72791.known	chr17	-	5395	23	FSM	ENSG00000159842.16	ENST00000302538.10	5395	23	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_22	20.5812740853234	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	-11	True	NA	-1	True	AATAAA	-34	NA	1179981	1003518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1179666
transcript_72795.known	chr17	-	2673	22	FSM	ENSG00000159842.16	ENST00000291107.6	2673	22	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_21	26.6075023945027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGCCCAGCCCCAGCC	-10	True	NA	NA	False	NA	NA	NA	1109100	1005907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1108933
transcript_72796.nic	chr17	-	5320	22	NIC	ENSG00000159842.16	novel	5395	23	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	29.1170131283197	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	8860	False	NA	-1	True	AATAAA	-34	NA	1180005	1003518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1125182_1125368_1179666
transcript_72800.known	chr17	-	2213	18	FSM	ENSG00000159842.16	ENST00000536794.6	2213	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	26.5685768033668	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAGGCAGGGTGGCTGCG	NA	False	NA	NA	False	NA	NA	NA	1079146	1006079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1078813
transcript_72808.known	chr17	-	1049	8	FSM	ENSG00000159842.16	ENST00000543210.6	1049	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	40.8406560142399	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGGTGGTGGAACCAGC	-19	True	NA	NA	False	NA	NA	NA	1031838	1006060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1031597
transcript_72810.nic	chr17	-	1168	5	ISM	ENSG00000159842.16	ENST00000302538.10	5395	23	-24	79750	-24	0	5prime_fragment	FALSE	canonical	3	62	junction_4	9.54921462739214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCCAAGGCAGTGTT	8860	False	NA	NA	False	NA	NA	NA	1180005	1083268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1179666
transcript_72812.nnic	chr17	-	1338	3	NNC	ENSG00000159842.16	novel	563	3	NA	NA	-12	5575	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCGTTTTGTGTATCCA	-23	True	NA	3	True	AATATA	-28	NA	1179993	1148234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_1148845_1153837_1154239_1179666
transcript_72815.known	chr17	+	3182	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	53.0178167118271	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	2	True	NA	NA	False	ATTAAA	-17	NA	997128	1003671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
transcript_72819.known	chr17	-	1818	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	4821.76792150855	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCGCCTCCATCCTTT	-22	True	NA	-17	True	AATAAA	-25	NA	1400220	1344539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
transcript_7282.known	chr1	-	1006	4	FSM	ENSG00000181817.6	ENST00000476041.1	1006	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	215.904814418041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTAGTGTGGGTTGCT	16	True	NA	NA	False	NA	NA	NA	36397887	36391237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36391605_36392357_36392488_36393765_36394154_36397766
transcript_72827.known	chr17	-	2052	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	9776	junction_2	536.426472128287	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATTATGGATCA	-24	True	NA	-8	True	ATTAAA	-18	NA	1400222	1344274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
transcript_72831.known	chr17	-	3850	3	FSM	ENSG00000167193.8	ENST00000300574.3	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	84	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGAATATTTTTC	-1	True	NA	-2	True	AATAAA	-42	NA	1456232	1420692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1423651_1436619_1437156_1455876
transcript_72833.known	chr17	-	3675	3	FSM	ENSG00000167193.8	ENST00000398970.5	3675	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	82.5	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATTTTTCACAA	8	True	NA	2	True	AAAAAG	-4	NA	1456223	1420688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1423651_1436789_1437156_1455876
transcript_72838.known	chr17	-	4724	32	FSM	ENSG00000197879.17	ENST00000648446.1	4724	32	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_31	38.5159669310902	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	6	True	NA	0	True	AATAAA	-19	NA	1485760	1464185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1485693
transcript_72839.known	chr17	-	4714	32	FSM	ENSG00000197879.17	ENST00000361007.7	4714	32	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_31	43.533713178898	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAGCAATACGTGTT	-13	True	NA	-26	True	NA	NA	NA	1491682	1464211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1491599
transcript_7284.known	chr1	-	860	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTCTAAGTGTCTCCA	-5	True	NA	-30	True	ATTAAA	-15	NA	36397908	36393435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36394154_36397766
transcript_72840.known	chr17	-	4931	32	FSM	ENSG00000197879.17	ENST00000648651.1	4931	32	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_31	48.8540266602018	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	10	True	NA	0	True	AATAAA	-19	NA	1492686	1464185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1492412
transcript_72857.known	chr17	-	3194	14	FSM	ENSG00000132376.20	ENST00000406424.8	3194	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	64.7593633996582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCAGGGGTAATTATTA	3	True	NA	3	True	NA	NA	NA	1516742	1494608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1515426_1515586_1515887_1516119_1516455
transcript_72863.known	chr17	-	2880	13	FSM	ENSG00000132376.20	ENST00000320345.10	2880	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	57.6374564748384	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGCTTGTCCTGCCA	10	True	NA	NA	False	NA	NA	NA	1516735	1494756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1515887_1516119_1516455
transcript_72867.known	chr17	-	2706	12	FSM	ENSG00000132376.20	ENST00000421807.7	2706	12	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	26.3027510109456	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	-11	True	NA	-6	True	NA	NA	NA	1516612	1494576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1516455
transcript_7287.known	chr1	-	1455	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	8.24321644044063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCATTTTATTCTTA	-18	True	NA	-8	True	AATATA	-20	NA	36450451	36417905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_72870.nic	chr17	-	2893	11	NIC	ENSG00000132376.20	novel	2706	12	NA	NA	-166	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	48.5176256632577	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	4669	False	NA	-6	True	NA	NA	NA	1516908	1494576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513871_1513980_1516455
transcript_72876.known	chr17	-	565	5	FSM	ENSG00000132376.20	ENST00000445774.2	565	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	56.0066960282429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAACATCTGCCTGAAG	4897	False	NA	NA	False	NA	NA	NA	1516680	1509340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1509354_1509682_1509800_1513452_1513555_1513871_1513980_1516455
transcript_72879.nic	chr17	-	3517	12	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	-19	-275	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	195.4333180862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTCTGGAGTCCAGT	-26	True	NA	-12	True	AATAAA	-10	NA	1562811	1517992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562655
transcript_7288.known	chr1	-	767	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	11.6913429510899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-10	True	NA	NA	False	AATAAA	-21	NA	36450443	36428298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_72880.known	chr17	-	3888	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	162.713559605028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACCAAACAAGCAAAACAT	-7	True	NA	NA	False	NA	NA	NA	1562792	1517717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_72883.known	chr17	+	542	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	54	5	54	-5	multi-exon	FALSE	canonical	3	193	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	7	True	NA	18	True	AATAAA	-18	NA	1516930	1518096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1517094_1517717
transcript_72885.known	chr17	-	3261	15	FSM	ENSG00000167703.15	ENST00000571650.5	3261	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.8818250678863	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGTGCCTATTTTGA	544	False	NA	4	True	NA	NA	NA	1628341	1574371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1586948_1586961_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628080
transcript_72886.nic	chr17	-	3315	15	NIC	ENSG00000167703.15	novel	3261	15	NA	NA	-87	0	intron_retention	FALSE	canonical	0	0	junction_5	29.3894504187875	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGTGCCTATTTTGA	-28	True	NA	4	True	NA	NA	NA	1628428	1574371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1586948_1586961_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628113
transcript_72894.known	chr17	-	8133	14	FSM	ENSG00000167703.15	ENST00000301335.10	8133	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	10.8992155409591	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGAGCGGCTTCCTCCTT	-1	True	NA	NA	False	AATAAA	-17	NA	1628834	1569267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628793
transcript_72898.nic	chr17	-	2811	13	NIC	ENSG00000167703.15	novel	8133	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	20.9700513961114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGTGCCTATTTTGA	9	True	NA	4	True	NA	NA	NA	1628824	1574371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1627714_1627921_1628793
transcript_729.known	chr1	-	1021	8	FSM	ENSG00000160087.21	ENST00000400930.8	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	249.344282927384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGGGCACCGCGCAC	11	True	NA	NA	False	NA	NA	NA	1273833	1255177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1264782_1264831_1267861_1267993_1273665
transcript_7290.known	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1469	junction_1	78.7253038697708	876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-18	True	NA	27	True	GGGGCT	-15	NA	36464384	36455717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
transcript_72903.known	chr17	-	2698	11	FSM	ENSG00000074660.17	ENST00000573852.5	2698	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.17647603485372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCCCGGAGGGGCCCAG	4355	False	NA	NA	False	NA	NA	NA	1645712	1634604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1635618_1636708_1636856_1636940_1637063_1638805_1638927_1639638_1639743_1639911_1640041_1640447_1640667_1643441_1643968_1644833_1644936_1645177_1645240_1645559
transcript_72904.known	chr17	-	3428	11	FSM	ENSG00000074660.17	ENST00000263071.9	3428	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.69072480941474	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAAAACGGAGATTTC	-5	True	NA	NA	False	AATAAA	-25	NA	1645732	1633857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1635618_1636708_1636856_1636940_1637063_1638805_1638927_1639638_1639743_1639911_1640041_1640447_1640667_1643441_1643968_1644833_1644936_1645177_1645240_1645596
transcript_72906.known	chr17	-	3292	10	FSM	ENSG00000074660.17	ENST00000576012.5	3292	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.10818510677892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACAGAATCTCCCTCTG	6	True	NA	NA	False	GATAAA	-33	NA	1645721	1634389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1635618_1636708_1636856_1636940_1637063_1638805_1638927_1639638_1639743_1639911_1640667_1643441_1643968_1644833_1644936_1645177_1645240_1645596
transcript_72907.known	chr17	-	1560	8	FSM	ENSG00000167705.12	ENST00000301336.7	1560	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	39.5071680398711	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCCTCGCCTGTCTGTC	0	True	NA	-6	True	AATAAA	-24	NA	1649866	1646149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1646620_1646905_1646990_1647834_1647958_1648349_1648496_1648798_1649045_1649199_1649307_1649411_1649506_1649576
transcript_72915.known	chr17	-	7280	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_28	197.26541078012	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGGGCTGGTTTGTTT	-21	True	NA	-8	True	AATAAA	-30	NA	1684867	1650628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_72922.nic	chr17	-	1699	11	ISM	ENSG00000174231.17	ENST00000304992.11	7280	43	-2	28389	-2	-577	5prime_fragment	FALSE	canonical	3	732	junction_1	50.6493830169727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCTGCATTGGACCCTA	-23	True	NA	-2	True	NA	NA	NA	1684869	1679017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_72923.known	chr17	-	865	3	FSM	ENSG00000174231.17	ENST00000571346.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCGTCTCAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	1684852	1683020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1683702_1684471_1684583_1684779
transcript_72924.known	chr17	+	426	1	FSM	ENSG00000277597.1	ENST00000615078.1	426	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGTTGTCATCAATG	257	False	NA	3	True	AATAAA	-24	NA	1684725	1685151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1684700_1685200
transcript_72925.known	chr17	-	7445	42	FSM	ENSG00000174231.17	ENST00000572621.5	7445	42	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_28	198.336256575088	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCAGGGGCTGGTTTGT	9	True	NA	-10	True	AATAAA	-28	NA	1684837	1650630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471
transcript_72928.known	chr17	+	6982	10	FSM	ENSG00000167716.19	ENST00000409644.6	6982	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	6.96729573626262	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGAACTGAGGCTTGT	-21	True	NA	6	True	AATAAA	-17	NA	1724703	1738585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1728627_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1735718_1736038_1736219_1737364
transcript_72929.known	chr17	+	3315	10	FSM	ENSG00000167716.19	ENST00000419248.5	3315	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	14.6826512222276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGCTTGTCTTTTTTTT	8007	False	NA	15	True	AATAAA	-26	NA	1724539	1738594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1724787_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1735718_1736038_1736219_1737364
transcript_72933.known	chr17	+	590	2	FSM	ENSG00000167716.19	ENST00000575206.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACATCAGCTACCTGGT	3392	False	NA	NA	False	NA	NA	NA	1728209	1730927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1728627_1730754
transcript_72934.known	chr17	+	2249	10	FSM	ENSG00000167711.14	ENST00000453066.6	2249	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.71404520791032	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTTTGATGTCACC	10	True	NA	1	True	AATAAA	-13	NA	1742870	1755265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1742909_1744991_1745059_1745174_1745214_1745332_1745396_1745707_1745910_1747018_1747163_1747308_1747513_1748597_1748741_1752585_1752791_1754121
transcript_72937.known	chr17	+	1438	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	21.2468485058037	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	0	True	NA	29	True	AATAAA	-17	NA	1762059	1777565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_72940.nic	chr17	+	1464	8	NIC	ENSG00000132386.11	novel	459	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	131.651984025913	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	3	True	NA	29	True	AATAAA	-17	NA	1762803	1777565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_1762884_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_72948.known	chr17	+	4847	17	FSM	ENSG00000132383.12	ENST00000254719.10	4847	17	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_5	102.587158065715	916	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGTAAATGTTTAAGAAA	0	True	NA	NA	False	NA	NA	NA	1830004	1900082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1830127_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660_1875794_1877211_1877315_1878992_1879062_1879214_1879408_1879559_1879700_1880542_1880692_1883811_1883945_1888674_1888852_1891832_1891941_1895008_1895096_1897070
transcript_72961.known	chr17	-	4405	11	FSM	ENSG00000186532.12	ENST00000305513.12	4405	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	16.6916146612603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAGATGGAGTTTCA	-35	True	NA	38	True	NA	NA	NA	1829902	1779484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1781440_1783034_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
transcript_72980.nic	chr17	-	2724	10	ISM	ENSG00000186532.12	ENST00000305513.12	4405	11	-7	3283	-7	342	5prime_fragment	FALSE	canonical	3	105	junction_2	12.4791183607548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCCTCCTGGGAGATA	-42	True	NA	NA	False	NA	NA	NA	1829909	1782767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
transcript_72996.known	chr17	+	2607	13	FSM	ENSG00000108963.19	ENST00000571418.7	2607	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	35.3084621585251	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	12	True	NA	14	True	AATAAA	-25	NA	2030158	2043898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036654_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_73.known	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3769	junction_2	292.5	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_+_10792_10882_11058_11434
transcript_73002.known	chr17	+	2646	13	FSM	ENSG00000108963.19	ENST00000263083.12	2646	13	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	22.8321167559111	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	6	True	NA	14	True	AATAAA	-25	NA	2030152	2043898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_73015.known	chr17	+	2518	12	FSM	ENSG00000108963.19	ENST00000575667.6	2518	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	43.964486043372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	12	True	NA	14	True	AATAAA	-25	NA	2030158	2043898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_73029.known	chr17	+	991	6	FSM	ENSG00000108963.19	ENST00000576129.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	31.9036048119958	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCGGACAGCTAACAAGCA	39	False	NA	NA	False	NA	NA	NA	2030185	2037283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834
transcript_73031.known	chr17	+	1345	5	FSM	ENSG00000108963.19	ENST00000572819.6	1345	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	31.5990506186499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGGGCCTGATGGGG	20	False	NA	NA	False	NA	NA	NA	2030166	2037181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036687_2036834
transcript_73036.known	chr17	+	1031	2	FSM	ENSG00000262664.3	ENST00000572195.3	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	0	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	-7	True	NA	10	True	AATAAA	-14	NA	2042021	2043425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2042232_2042604
transcript_73040.nnic	chr17	-	6354	19	NNC	ENSG00000070366.14	novel	5974	19	NA	NA	239	0	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_18	21.8409655871204	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTCTTGCTGATCTG	-17	True	NA	-6	True	AATAAA	-20	NA	2303546	2059842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303013
transcript_73041.known	chr17	-	5974	19	FSM	ENSG00000070366.14	ENST00000263073.11	5974	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_18	16.0088709975839	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTCTTGCTGATCTG	10	True	NA	-6	True	AATAAA	-20	NA	2303785	2059842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303632
transcript_73052.known	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_7	72.4602635650628	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-8	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
transcript_7306.known	chr1	-	3008	17	FSM	ENSG00000119535.18	ENST00000373106.6	3008	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.29753371825167	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTCTCTGTTATTTAT	8	True	NA	NA	False	NA	NA	NA	36482913	36466042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36466828_36467229_36467312_36467557_36467652_36467821_36467963_36468074_36468222_36469155_36469258_36469651_36469841_36471432_36471647_36472065_36472140_36472237_36472392_36472516_36472687_36473434_36473623_36473763_36473888_36475376_36475674_36479432_36479517_36481477_36481538_36482810
transcript_73071.known	chr17	+	2482	8	FSM	ENSG00000167720.13	ENST00000344595.10	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	16.9428812334206	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGACCTGCAGGGTCTG	-14	True	NA	11	True	AATAAA	-24	NA	2303949	2325260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2304018_2315556_2315729_2317869_2317997_2318825_2318930_2321305_2321426_2321541_2321617_2323135_2323346_2323654
transcript_7308.nnic	chr1	-	818	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-505	0	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTAGTGAGAATCTT	NA	False	NA	-20	True	AATAAA	-21	NA	36770230	36768121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_36768612_36769902
transcript_73084.known	chr17	+	4878	24	FSM	ENSG00000141258.13	ENST00000268989.8	4878	24	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	43.8938830346997	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCCTCTGGGACTGGA	1	True	NA	16	True	AATAAA	-16	NA	2337500	2381054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2367270_2367406_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
transcript_73087.known	chr17	+	4734	23	FSM	ENSG00000141258.13	ENST00000426855.6	4734	23	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_14	23.9044240173928	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTGGGACTGGACACT	14	True	NA	20	True	AATAAA	-20	NA	2337513	2381058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
transcript_7309.nnic	chr1	-	721	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-505	-97	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGATTTTCCCCTTTT	NA	False	NA	-16	True	AATAAA	-25	NA	36770230	36768218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_36768612_36769902
transcript_73095.known	chr17	-	4925	6	FSM	ENSG00000070444.15	ENST00000174618.5	4925	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	3.12409987036266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAGCTGCCAGCCTGCA	-6	True	NA	-12	True	AATAAA	-36	NA	2401060	2384072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2387650_2387856_2388050_2394042_2394155_2394304_2394347_2394874_2395455_2400639
transcript_7310.known	chr1	-	2955	15	FSM	ENSG00000163873.10	ENST00000373093.4	2955	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	5.948760803902	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGGGTGATGGTTGCA	380	False	NA	-78	True	CATAAA	-20	NA	37034129	36804617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36805238_36806103_36806327_36817059_36817278_36819735_36819855_36825602_36825827_36841735_36841940_36850310_36850425_36853614_36853723_36859107_36859252_36859843_36860018_36869747_36869802_36872187_36872370_36880633_36880892_36890919_36891097_37033993
transcript_73100.known	chr17	-	556	3	FSM	ENSG00000070444.15	ENST00000572892.5	556	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCACGGTCATCGCC	8322	False	NA	NA	False	NA	NA	NA	2392760	2387343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2387650_2387856_2388050_2392703
transcript_73110.nnic	chr17	-	3419	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-19	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.6691894323298	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCATGAGCAGGCCAG	NA	False	NA	NA	False	NA	NA	NA	2511910	2417058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2417174_2418506_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_73112.nnic	chr17	-	2964	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-19	-1001	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	48.6691894323298	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCATGAGCAGGCCAG	NA	False	NA	NA	False	NA	NA	NA	2511910	2417058	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2417174_2418961_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_73117.known	chr17	-	5740	10	FSM	ENSG00000127804.13	ENST00000263092.11	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.5758372192228	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	1	True	NA	-5	True	AATAAA	-33	NA	2511888	2416048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_7312.known	chr1	-	1395	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	21	3	1	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTATTTTTCTCTGCTA	-20	True	NA	-2	True	AATAAA	-17	NA	37474411	37454878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37455913_37456366_37456460_37474143
transcript_73125.known	chr17	-	575	4	FSM	ENSG00000127804.13	ENST00000576976.2	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	72.6376088691129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATGTCTTCTGCTTTA	0	True	NA	NA	False	NA	NA	NA	2511889	2467760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2467877_2477685_2477886_2502203_2502332_2511758
transcript_73129.known	chr17	+	5589	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_4	44.4185771946829	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	9	True	NA	13	True	ATTAAA	-15	NA	2593653	2685615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_7313.known	chr1	+	2721	6	FSM	ENSG00000163874.11	ENST00000640233.1	2721	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	18.2164760587771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAGCCCTTTCAAGAG	0	True	NA	17	True	AATAAA	-9	NA	37474579	37484360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482349_37482541_37482736
transcript_73131.known	chr17	+	5204	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	172.381360167894	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	-3	True	NA	6	True	ATTAAA	-41	NA	2593946	2685608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_73133.known	chr17	+	957	7	FSM	ENSG00000007168.14	ENST00000675430.1	957	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	202.387211387808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTTTCTAATGCATTT	20	True	NA	NA	False	TTTAAA	-3	NA	2593969	2671552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2671390
transcript_73134.nic	chr17	+	1440	7	ISM	ENSG00000007168.14	ENST00000675621.1	1563	11	-353	8992	-65	1360	5prime_fragment	FALSE	canonical	3	477	junction_4	38.834763922147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGTGTGGTGGCGC	NA	False	NA	NA	False	AATACA	-5	NA	2593588	2672918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654
transcript_73136.nic	chr17	+	854	5	ISM	ENSG00000007168.14	ENST00000675430.1	957	7	-381	4507	-65	0	5prime_fragment	FALSE	canonical	3	477	junction_4	37.7979827504061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTCTTGGTCAGAAACG	NA	False	NA	44	True	AATGAA	-25	NA	2593588	2667045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991
transcript_73138.nnic	chr17	+	1082	3	NNC	ENSG00000007168.14	novel	694	4	NA	NA	-65	4426	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	266.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTCTTTGTTTGTTT	NA	False	NA	2	True	AATAAA	-13	NA	2593588	2643074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2594007_2638098_2638321_2642632
transcript_73145.known	chr17	-	5224	26	FSM	ENSG00000132361.18	ENST00000435359.5	5224	26	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_15	34.6363970412628	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTCACCTGTGTGTT	130	False	NA	-7	True	AATAAA	-23	NA	2711633	2689385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696536_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
transcript_73146.known	chr17	-	5357	26	FSM	ENSG00000132361.18	ENST00000651024.2	5357	26	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_15	30.9253552930278	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCTCACCTGTGTGT	-1	True	NA	-8	True	AATAAA	-22	NA	2711764	2689386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696539_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
transcript_7315.known	chr1	+	2654	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.91160935469109	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATTGTCTTTGTTAT	0	True	NA	34	True	AATAAA	-26	NA	37474579	37484377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
transcript_73167.known	chr17	+	443	2	FSM	ENSG00000262050.1	ENST00000572876.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTCGGCCGGGCGG	286	False	NA	NA	False	TTTAAA	-29	NA	2712308	2712833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2712400_2712481
transcript_73168.known	chr17	-	3147	1	ISM	ENSG00000277200.2	ENST00000614400.2	4643	4	25705	0	25705	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGTCCAATCTCTTGCA	NA	False	NA	-9	True	AATAAA	-15	NA	2723947	2720800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_2720800_2723900
transcript_73169.nnic	chr17	-	764	4	NNC	ENSG00000277200.2	novel	4643	4	NA	NA	-12	-6393	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	8.52447456836295	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAACATGTGGCCAGGC	-7	True	NA	-20	True	AATAAA	-16	NA	2749664	2727193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2727503_2730445_2730494_2735015_2735169_2749410
transcript_7317.known	chr1	-	1408	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	151.013176881479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATTTCACAGGCTT	6	True	NA	-49	True	TTTAAA	-37	NA	37514756	37493334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_73171.known	chr17	+	3175	26	FSM	ENSG00000132359.15	ENST00000637138.1	3175	26	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	36.3506038464287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCACAAAGGGGTGGGAA	56	False	NA	NA	False	NA	NA	NA	2755704	3034207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2755768_2770328_2770446_2800514_2800551_2905283_2905369_2957758_2957795_2962669_2962715_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
transcript_73179.nnic	chr17	+	2931	24	NNC	ENSG00000132359.15	novel	606	6	NA	NA	57382	-267	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_4	15.0610603462161	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTATCTGCTTCTGTGC	150	False	NA	19	True	GATAAA	-39	NA	2853863	3033940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2962669_2962715_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
transcript_73182.nnic	chr17	+	6685	23	NNC	ENSG00000132359.15	novel	606	6	NA	NA	57382	0	intron_retention	FALSE	canonical	3	31	junction_3	21.6108042308502	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTCAGAGTTCTT	150	False	NA	4	True	AATAAA	-17	NA	2853863	3037739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
transcript_7319.known	chr1	-	4702	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_4	32.5955859315678	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCTGATAATTGTTT	-4	True	NA	NA	False	AATAAA	-15	NA	37514766	37489992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_73194.nnic	chr17	+	2718	3	NNC	ENSG00000132359.15	novel	3175	26	NA	NA	57382	-47938	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	8	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATACCTCTAGCAAAAT	150	False	NA	NA	False	AAAACA	-10	NA	2853863	2960152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2854103_2905283_2905369_2957758
transcript_73201.known	chr17	-	3788	7	FSM	ENSG00000197417.9	ENST00000225519.5	3788	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	13.208793367383	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTGCCTTTTTTTT	2	True	NA	NA	False	AAAAAG	-13	NA	3636250	3608239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
transcript_7321.known	chr1	-	603	6	FSM	ENSG00000163875.16	ENST00000373073.8	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	152.563953802987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAATGTTCTCTGGTTT	-1	True	NA	30	True	NA	NA	NA	37514763	37493761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37493815_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_73216.known	chr17	+	2490	13	FSM	ENSG00000040531.16	ENST00000381870.8	2490	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.4300511206722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTGCTCGATACAGA	-22	True	NA	22	True	ATTAAA	-23	NA	3636458	3661542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636709_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235_3660351_3660616
transcript_73221.known	chr17	+	2657	12	FSM	ENSG00000040531.16	ENST00000673965.1	2657	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19.8461021007915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGCTTGTCAGTCC	-22	True	NA	-72	True	NA	NA	NA	3636458	3661448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636704_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_73224.known	chr17	+	4139	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	9.916177616017	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	-1	True	NA	NA	False	ATTAAA	-22	NA	3636759	3663103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_73233.known	chr17	-	1998	12	FSM	ENSG00000083454.22	ENST00000547178.5	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	18.2869686700802	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	313	False	NA	-4	True	AATAAA	-17	NA	3696096	3673226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
transcript_73239.nic	chr17	+	2764	11	NIC	ENSG00000040531.16	novel	2657	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_4	15.1950649883441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	-22	True	NA	-8	True	NA	NA	NA	3636458	3661512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_73245.known	chr17	-	2031	11	FSM	ENSG00000083454.22	ENST00000345901.7	2031	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	19.8143887112371	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGTCAATTTCAAACG	20	True	NA	-22	True	CATAAA	-7	NA	3696216	3673244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
transcript_7325.known	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	178.552913325834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-1	True	NA	-5	True	AATAAA	-18	NA	37514763	37492574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_73252.nnic	chr17	+	2606	10	NIC	ENSG00000040531.16	novel	4139	12	NA	NA	79	0	intron_retention	FALSE	canonical	3	8	junction_3	20.4232982427205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	-1	True	NA	-8	True	NA	NA	NA	3636537	3661512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_3636832_3637106_3637317_3640187_3640268_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_73253.known	chr17	+	2417	10	FSM	ENSG00000040531.16	ENST00000673669.1	2417	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	22.7373625190124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	2	True	NA	-8	True	NA	NA	NA	3636725	3661512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_73264.known	chr17	+	803	6	FSM	ENSG00000040531.16	ENST00000399306.7	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	27.3671335729557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGCTGAGAGGGGAT	68	False	NA	NA	False	AATAAA	-21	NA	3636828	3650519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3650173
transcript_73268.nnic	chr17	-	1225	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.712594018244	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-10	True	NA	-6	True	AATAAA	-15	NA	3668618	3662894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_3663563_3663657_3663886_3664194_3664273_3664678_3664799_3668487
transcript_73269.nnic	chr17	-	1347	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.712594018244	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	NA	False	NA	-6	True	AATAAA	-15	NA	3668716	3662894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_3663567_3663637_3663886_3664194_3664273_3664678_3664799_3668487
transcript_7327.known	chr1	-	4554	4	FSM	ENSG00000163877.11	ENST00000296215.8	4554	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	9.28559218478941	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-3	True	NA	0	True	ATTAAA	-22	NA	37554293	37534448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37538013_37540156_37540756_37552644_37552748_37554005
transcript_73273.known	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	6.0184900284226	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	0	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
transcript_73278.known	chr17	-	1302	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	174.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGGCTTTGCTGAGGC	NA	False	NA	-7	True	AATAAA	-14	NA	3668679	3662895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3663886_3664678_3664799_3668487
transcript_73279.known	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1261	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	2	True	NA	18	True	ATTAAA	-15	NA	3668811	3669665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3668900_3669097
transcript_73280.known	chr17	+	762	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTCTTTCCTGCTG	12	True	NA	21	True	ATTAAA	-18	NA	3668821	3669668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3669013_3669097
transcript_73281.known	chr17	-	721	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	262.530950556311	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGTGCAAAAAGTAAAC	NA	False	NA	-75	True	NA	NA	NA	3723854	3714691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
transcript_73282.known	chr17	-	672	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_3	11.6141675934562	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCCTTTAATCTGGAA	-34	True	NA	-11	True	AATAAA	-19	NA	3723837	3714627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
transcript_73284.known	chr17	+	2797	1	FSM	ENSG00000177602.5	ENST00000325418.5	2797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATATTTATAAACCCT	-8	True	NA	NA	False	AATAAA	-22	NA	3723902	3726699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3723900_3726700
transcript_73290.known	chr17	-	12772	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_6	33.2802702646611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTAGTGGCATT	-7	True	NA	-2	True	AATAAA	-20	NA	3846246	3802157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_733.known	chr1	-	2455	8	FSM	ENSG00000160087.21	ENST00000450390.6	2455	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	249.571305912146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGCTTGTGTCTGTGT	-9	True	NA	-3	True	AAAAAG	-31	NA	1273853	1253908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1266097_1266291_1267861_1267993_1273665
transcript_73301.nic	chr17	-	681	5	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	-49	23930	-49	-3584	5prime_fragment	FALSE	canonical	3	206	junction_2	24.2383992870816	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAACAACACAAAGGAGGG	NA	False	NA	15	True	NA	NA	NA	3846295	3826087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_73302.nic	chr17	-	1423	3	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	-49	36946	-49	-16600	5prime_fragment	FALSE	canonical	3	227	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGAGTCTATGTTCTT	NA	False	NA	-7	True	AATAAA	-19	NA	3846295	3839103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_3840206_3843085_3843152_3846040
transcript_73306.nic	chr17	-	3729	17	NIC	ENSG00000004660.15	novel	3572	16	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	13.7113092008021	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGCGTACATTTTCT	-24	True	NA	NA	False	AATAAA	-33	NA	3893096	3860314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_3862284_3865907_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882256_3882371_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
transcript_73309.known	chr17	-	3572	16	FSM	ENSG00000004660.15	ENST00000348335.7	3572	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	10.358034991681	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGCGTACATTTTCT	19	True	NA	NA	False	AATAAA	-33	NA	3893053	3860314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3862284_3865907_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
transcript_73316.nnic	chr17	-	2273	10	NNC	ENSG00000108405.4	novel	2662	12	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.06574033851394	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCGTCCGTGCTCTC	9654	False	NA	NA	False	AATAAA	-16	NA	3904717	3896591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_3897880_3898008_3898111_3898483_3898550_3898933_3899025_3899633_3899762_3903201_3903344_3903550_3903632_3903927_3904025_3904329_3904400_3904509
transcript_73321.known	chr17	-	3274	22	FSM	ENSG00000074370.18	ENST00000352011.7	3274	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.9931676089723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGGTCAGAATGGCCATC	858	False	NA	NA	False	GATAAA	-9	NA	3964346	3925290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3925442_3928239_3928328_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
transcript_73322.known	chr17	-	3197	21	FSM	ENSG00000074370.18	ENST00000397043.7	3197	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	27.167075661543	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCACCACACTCGCCCA	789	False	NA	NA	False	NA	NA	NA	3964415	3925345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3925439_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
transcript_73327.known	chr17	-	4826	22	FSM	ENSG00000074370.18	ENST00000309890.11	4826	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.9931676089723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCCTCAGCGTCTGTTT	0	True	NA	-3	True	AATAAA	-23	NA	3964464	3923869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3925442_3928226_3928328_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
transcript_7333.known	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	38.8766710966301	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	3	True	NA	-39	True	ATTAAA	-18	NA	37595937	37566815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_73330.known	chr17	-	5033	25	FSM	ENSG00000185722.18	ENST00000574367.5	5033	25	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_11	29.5855632962355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGTTCATTCTTTT	11	True	NA	NA	False	ACTAAA	-17	NA	4263956	4166273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182353_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_73334.nic	chr17	-	1927	10	ISM	ENSG00000185722.18	ENST00000574367.5	5033	25	-23	28187	0	0	5prime_fragment	FALSE	canonical	2	74	junction_6	23.3036848673136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	-12	True	NA	NA	False	NA	NA	NA	4263979	4194460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_73336.known	chr17	-	1881	9	FSM	ENSG00000185722.18	ENST00000570934.5	1881	9	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_6	24.6221445044903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	4242450	4194460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255
transcript_73337.known	chr17	+	1588	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	38.8930156540563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCAGGTGTGGTGTG	5	True	NA	35	True	TTTAAA	-29	NA	4143210	4157572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
transcript_73339.known	chr17	+	1969	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.6144555520604	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	-9	True	NA	12	True	ATTAAA	-25	NA	4143196	4157697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
transcript_73344.known	chr17	+	694	4	FSM	ENSG00000167740.10	ENST00000577075.6	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	33.2365260920372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTCTTCTGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4143167	4157085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4143314_4149890_4150032_4154673_4154861_4156865
transcript_73354.known	chr17	-	4167	6	FSM	ENSG00000132388.13	ENST00000396981.7	4167	6	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	87.1862374460557	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGAGCTATTTTGGTTTT	-19	True	NA	-40	True	AATAAA	-20	NA	4366675	4269258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4366270
transcript_73364.known	chr17	-	984	5	FSM	ENSG00000132388.13	ENST00000571980.1	984	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	539.731877880119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATAGCACAACATGATC	28	True	NA	-123	True	AATGAA	-35	NA	4366628	4272296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4307020_4307124_4366270
transcript_73376.known	chr17	-	863	4	FSM	ENSG00000132388.13	ENST00000574633.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	627.563719651019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTACCAAATAATGCTTT	31	True	NA	-62	True	AATATA	-31	NA	4366625	4272235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4272517_4282797_4282922_4307020_4307124_4366270
transcript_73380.known	chr17	+	1877	12	FSM	ENSG00000182557.8	ENST00000355530.7	1877	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCGTGTTATTTATAG	8	True	NA	NA	False	AATAAA	-39	NA	4433939	4488204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4434167_4439657_4439724_4445031_4445169_4446047_4446200_4446895_4446963_4448154_4448304_4449234_4449388_4453015_4453206_4478571_4478638_4486227_4486327_4486411_4486584_4487805
transcript_73383.known	chr17	-	4104	27	FSM	ENSG00000132382.15	ENST00000381556.6	4104	27	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_1	151.494863896379	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTTCTTGTACAACAA	-17	True	NA	-1	True	AATAAA	-43	NA	4555386	4538896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4538976_4539438_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_73403.known	chr17	-	4558	26	FSM	ENSG00000132382.15	ENST00000254718.9	4558	26	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_16	71.3693043261597	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGGACCTGGTTCTTGT	-15	True	NA	-8	True	AATAAA	-36	NA	4555384	4538903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_7343.nic	chr1	-	2070	14	ISM	ENSG00000134697.13	ENST00000373062.8	2350	16	-31	1486	-31	-1481	5prime_fragment	FALSE	canonical	3	652	junction_7	38.1304208484884	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGGAAGAAGATGTAGAT	NA	False	NA	-27	True	AAGAAA	-3	NA	37595968	37568301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_73463.nic	chr17	-	2947	13	ISM	ENSG00000132382.15	ENST00000254718.9	4558	26	-18	8009	-16	772	5prime_fragment	FALSE	canonical	3	591	junction_3	74.8496641423475	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCAGCCCAGAGGAGGAC	-33	True	NA	NA	False	NA	NA	NA	4555402	4546912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_73490.known	chr17	+	1919	8	FSM	ENSG00000188176.12	ENST00000338859.8	1919	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.63624111659431	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4	False	NA	9	True	CATAAA	-20	NA	4583998	4608319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4584099_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_73491.known	chr17	+	2295	8	FSM	ENSG00000188176.12	ENST00000389313.9	2295	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	6.23354977979184	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	0	True	NA	9	True	CATAAA	-20	NA	4584528	4608319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4585005_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_73494.nic	chr17	+	2114	7	NIC	ENSG00000188176.12	novel	2295	8	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	5.73488351136175	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	460	False	NA	9	True	CATAAA	-20	NA	4584466	4608319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4585005_4592360_4592449_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_73496.known	chr17	-	2697	14	FSM	ENSG00000161905.13	ENST00000293761.8	2697	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	3.19578124274477	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAGCATCAAAAAATTT	-1	True	NA	NA	False	AATAAA	-16	NA	4641678	4630918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4631780_4631888_4632057_4632180_4632282_4632860_4632983_4633145_4633316_4633413_4633501_4635758_4635969_4637114_4637259_4638216_4638378_4638580_4638685_4638849_4638973_4639050_4639133_4639429_4639632_4641516
transcript_73521.known	chr17	-	3465	17	FSM	ENSG00000141456.16	ENST00000574876.5	3465	17	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_9	56.5461302278945	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	0	True	NA	-3	True	AATAAA	-20	NA	4704129	4671384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_7353.known	chr1	+	2628	6	FSM	ENSG00000163879.11	ENST00000652629.1	2628	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	14.4858551697855	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTCTGAATTTTT	-2	True	NA	20	True	AATAAA	-17	NA	37556939	37566857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37557076_37557602_37557749_37559326_37559497_37561556_37561736_37562080_37562246_37565025
transcript_73537.known	chr17	-	3878	16	FSM	ENSG00000141456.16	ENST00000573523.5	3878	16	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_8	58.3763270132299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTGCTGCTTCTGCCTT	18	True	NA	-6	True	AATAAA	-17	NA	4704111	4671387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_73583.known	chr17	+	472	2	FSM	ENSG00000244184.1	ENST00000497885.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCTGCGTGTGGCTT	NA	False	NA	7	True	CATAAA	-17	NA	4704229	4705529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4704371_4705198
transcript_73587.known	chr17	+	1579	15	FSM	ENSG00000141480.18	ENST00000575877.5	1579	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	130.162222175379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	34	True	NA	18	True	AATAAA	-14	NA	4710698	4721496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719290_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_73589.nic	chr17	+	2053	15	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-203	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_13	125.430951002485	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	5143	False	NA	19	True	AATAAA	-15	NA	4710392	4721497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
transcript_73590.known	chr17	+	1778	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	61.3775535650669	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	-33	True	NA	19	True	AATAAA	-15	NA	4710631	4721497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_7360.known	chr1	-	539	2	FSM	ENSG00000134697.13	ENST00000488496.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAATATGGCCAGATA	5	True	NA	NA	False	ATTAAA	-6	NA	37595935	37593484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37593847_37595758
transcript_73605.known	chr17	+	1769	14	FSM	ENSG00000141480.18	ENST00000346341.6	1769	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	161.873571822079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTTTTCTCTGTAG	-31	True	NA	21	True	AATAAA	-17	NA	4710633	4721499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
transcript_73606.known	chr17	+	1236	14	FSM	ENSG00000141480.18	ENST00000381488.10	1236	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	126.297057549106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGGTTGGGAGAGG	28	True	NA	NA	False	NA	NA	NA	4710692	4721061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_73610.known	chr17	+	1348	14	FSM	ENSG00000141480.18	ENST00000574954.5	1348	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	79.9128963679653	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACTGTCAATGGGG	-35	True	NA	NA	False	NA	NA	NA	4710629	4721096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_73651.known	chr17	+	1779	15	FSM	ENSG00000141480.18	ENST00000412477.7	1779	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	130.232073073966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	28	True	NA	18	True	AATAAA	-14	NA	4710692	4721496	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716672_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_73652.known	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	5.84465567848098	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-22	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_73653.known	chr17	-	1668	5	FSM	ENSG00000161921.17	ENST00000574412.6	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.85234995535981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGCTTTTCACACTGG	-16	True	NA	NA	False	TTTAAA	-16	NA	4739922	4734285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_73654.known	chr17	+	836	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	3.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	2	True	NA	NA	False	AATAAA	-33	NA	4731427	4733607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4731575_4731775_4731907_4733049
transcript_73655.known	chr17	+	802	2	FSM	ENSG00000161920.11	ENST00000573708.1	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTGGTGGTGAGTA	5	True	NA	NA	False	NA	NA	NA	4731430	4732433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4731575_4731775
transcript_73656.known	chr17	+	706	2	FSM	ENSG00000161920.11	ENST00000674339.1	706	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTCACTGGG	2	True	NA	NA	False	AATAAA	-34	NA	4731427	4733608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4731575_4733049
transcript_73658.known	chr17	+	1217	4	FSM	ENSG00000182327.8	ENST00000331264.8	1217	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGTGTCATCTCTGTT	11	True	NA	10	True	AATAAA	-13	NA	4788963	4790589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4789118_4789225_4789291_4789510_4789678_4789758
transcript_7366.known	chr1	-	2696	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	92.393181566607	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-14	True	NA	-1	True	AATAAA	-13	NA	37690529	37681569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
transcript_73663.known	chr17	+	871	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	2699.12007884051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	5541	False	NA	37	True	AATAAA	-23	NA	4796143	4798502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
transcript_73664.known	chr17	+	824	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	0	0	0	0	multi-exon	FALSE	canonical	3	6421	junction_3	391.823123360529	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	-12	True	NA	30	True	AATAAA	-16	NA	4796163	4798495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
transcript_73665.known	chr17	+	583	6	FSM	ENSG00000142507.10	ENST00000571309.1	583	6	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_3	2722.51100273259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGCCATTGCAGAGTC	28	False	NA	NA	False	NA	NA	NA	4796203	4798329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797716_4797812_4798008_4798154_4798279
transcript_7367.known	chr1	-	919	5	FSM	ENSG00000116922.15	ENST00000464085.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	95.3136270425169	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAGACCACGGGTAC	11	True	NA	NA	False	NA	NA	NA	37690504	37683110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690215
transcript_73677.known	chr17	+	583	2	FSM	ENSG00000142507.10	ENST00000575079.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	6760	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCGGTGCGTGCCTGCA	-15	True	NA	NA	False	AATACA	-14	NA	4796160	4797174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4796297_4796727
transcript_7368.known	chr1	-	2355	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	110.005681671448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-5	True	NA	-1	True	AATAAA	-13	NA	37690520	37681569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
transcript_73683.known	chr17	+	3391	25	FSM	ENSG00000129219.14	ENST00000572940.5	3391	25	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_23	24.2525771826418	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	3	True	NA	8	True	AATAAA	-12	NA	4807168	4823428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819550_4821792_4821908_4822639
transcript_73684.known	chr17	+	3443	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_23	15.6097703556316	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCGTCTTCCTTGGAG	-14	True	NA	10	True	AATAAA	-14	NA	4807151	4823430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
transcript_7371.known	chr1	+	2303	11	FSM	ENSG00000134690.11	ENST00000327331.2	2303	11	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_1	83.9321154266947	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATCACTGTTCATCCT	-2	True	NA	32	True	AATAAA	-21	NA	37692480	37709713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37692579_37692675_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_73720.nic	chr17	+	5096	33	NIC	ENSG00000141503.17	novel	5017	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	60.2424463625939	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCATGCAGGCCGCAT	-39	True	NA	4	True	AATAAA	-16	NA	4833339	4898053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890221_4890309_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_73721.nic	chr17	+	5006	33	NIC	ENSG00000141503.17	novel	5017	32	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	62.6289840923314	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCATGCAGGCCGCAT	-12	True	NA	4	True	AATAAA	-16	NA	4833366	4898053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893285_4893310_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_73728.known	chr17	+	5017	32	FSM	ENSG00000141503.17	ENST00000355280.11	5017	32	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_21	33.6602972170611	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCGCATGTCCTTGC	-39	True	NA	12	True	AATAAA	-24	NA	4833339	4898061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_73730.known	chr17	+	4863	32	FSM	ENSG00000141503.17	ENST00000347992.11	4863	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	73.6808089158731	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCATGCAGGCCGCATG	21	True	NA	5	True	AATAAA	-17	NA	4833399	4898054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892655_4892769_4892978_4893068_4893285_4893310_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_73731.known	chr17	+	3939	32	FSM	ENSG00000141503.17	ENST00000453408.7	3939	32	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	46.2624733580802	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGGCCCTGGGCTGGGGCT	59	False	NA	NA	False	NA	NA	NA	4833583	4897287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891515_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_7374.known	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_6	29.8812464413533	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	-20	True	NA	38	True	AATAAA	-27	NA	37692515	37709719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_73766.known	chr17	+	1511	11	FSM	ENSG00000108523.16	ENST00000572430.5	1511	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	281.259470951646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTGGGTCTTCACTTCT	-12	True	NA	-24	True	GGGGCT	-26	NA	4940119	4945170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940231_4940486_4940643_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_73767.known	chr17	+	1728	11	FSM	ENSG00000108523.16	ENST00000571816.5	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	266.192580662948	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	3370	False	NA	-3	True	NA	NA	NA	4940007	4945191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940231_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_73770.nic	chr17	+	1940	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-35	0	intron_retention	TRUE	canonical	3	175	junction_1	194.385895947237	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	3335	False	NA	28	True	AATAAA	-21	NA	4939972	4945222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4940231_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_73782.known	chr17	-	1692	8	FSM	ENSG00000108528.14	ENST00000225665.12	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_5	57.0835406421579	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCCCGGTGTGTTTC	11	True	NA	-4	True	TATAAA	-43	NA	4940046	4937129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
transcript_73786.known	chr17	-	952	7	FSM	ENSG00000108528.14	ENST00000544061.6	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	395.178862457664	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTGCTGCGCCTATA	4	True	NA	NA	False	GGGGCT	-4	NA	4940053	4937723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939815
transcript_73790.known	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	171.139968706579	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	-3	True	NA	28	True	AATAAA	-21	NA	4940267	4945222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_73791.known	chr17	+	1757	9	FSM	ENSG00000108523.16	ENST00000575111.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_3	44.4297197830461	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	11	False	NA	-3	True	NA	NA	NA	4940380	4945191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_73792.known	chr17	-	2176	6	FSM	ENSG00000108528.14	ENST00000574710.1	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_5	63.7915354886524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGCCCCAAATCTGGAG	27	True	NA	-10	True	AATAAA	-13	NA	4940030	4937316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768
transcript_73793.known	chr17	+	1436	10	FSM	ENSG00000108523.16	ENST00000576229.5	1436	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	229.500800181504	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGTCTTCACTTCTTG	90	False	NA	-22	True	GGGGCT	-28	NA	4940486	4945172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_73797.known	chr17	+	1453	12	FSM	ENSG00000108515.18	ENST00000519602.6	1453	12	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_4	34.9240024970395	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	0	True	NA	21	True	AATAAA	-17	NA	4951118	4957129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_73801.known	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_1	43.4286724040335	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	538	False	NA	23	True	AATAAA	-19	NA	4951094	4957131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_73834.known	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	28033	junction_2	437	24486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	0	True	NA	-16	True	AATAAA	-18	NA	4948530	4945651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4945998_4946627_4946821_4948262
transcript_73838.known	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	344.192492977726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	5575	False	NA	-32	True	GGGGCT	-8	NA	4967191	4959255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
transcript_73843.known	chr17	-	431	2	FSM	ENSG00000091640.8	ENST00000570341.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCCGCGGCGGACGGA	6017	False	NA	NA	False	NA	NA	NA	4966749	4966237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4966320_4966400
transcript_73844.known	chr17	-	579	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTAGCTGGGCTTGGT	11	True	NA	NA	False	AATAAA	-34	NA	4967808	4965829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4966320_4967719
transcript_73845.known	chr17	-	1005	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_1	42.5519290592879	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	2	True	NA	-2	True	AATAAA	-16	NA	4967817	4959225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_73846.known	chr17	-	1094	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	32.6042941957037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	4976	False	NA	-2	True	AATAAA	-16	NA	4967790	4959225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_73848.known	chr17	-	4777	22	FSM	ENSG00000108509.21	ENST00000361571.9	4777	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	26.5284684289955	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCCTCCGGCCTCTGTC	287	False	NA	-5	True	ATTAAA	-14	NA	4987370	4967996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4968820_4968906_4968982_4969149_4969338_4969499_4969521_4969629_4969702_4969901_4970086_4970339_4970537_4972231_4972537_4972768_4972992_4973174_4973254_4973584_4973770_4974384_4974501_4977057_4977193_4978503_4978631_4979683_4980622_4981224_4981360_4981677_4981832_4982756_4982893_4982975_4983044_4985879_4985984_4986191_4986287_4986953
transcript_73852.nic	chr17	+	4254	24	NIC	ENSG00000129250.12	novel	7917	23	NA	NA	-5	2434	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	92.722343004529	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGCTTGTGGCCTGTTTG	-6	True	NA	22	True	AATAAA	-13	NA	4997944	5024699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4998157_4999012_4999047_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
transcript_73853.known	chr17	+	7917	23	FSM	ENSG00000129250.12	ENST00000320785.10	7917	23	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_9	33.6055141087351	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCCACCAGTCTTA	-1	True	NA	11	True	AATAAA	-18	NA	4997949	5028401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
transcript_7386.known	chr1	+	1234	3	FSM	ENSG00000197982.14	ENST00000468084.1	1234	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	210.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGGTGACCGACGTT	NA	False	NA	24	True	ATTAAA	-15	NA	37807746	37809449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37808307_37808530_37808733_37808977
transcript_73863.nic	chr17	+	2346	21	ISM	ENSG00000129250.12	ENST00000320785.10	7917	23	-18	7560	-18	-1424	5prime_fragment	TRUE	canonical	3	282	junction_9	31.4650202606005	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGCCGATCTTCTGC	-19	True	NA	NA	False	AAGAAA	-2	NA	4997931	5020841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805
transcript_73868.known	chr17	-	2412	5	FSM	ENSG00000132517.15	ENST00000424747.1	2412	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTATCTAGTGTGCAA	-5	True	NA	NA	False	ATTAAA	-14	NA	5035432	5032604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5033170_5033260_5033385_5033478_5034359_5034476_5034748_5034860
transcript_7387.known	chr1	+	1329	3	FSM	ENSG00000197982.14	ENST00000373042.5	1329	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	254.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGACCGACGTTTCCTT	3	True	NA	29	True	ATTAAA	-20	NA	37807789	37809454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37808440_37808530_37808733_37808977
transcript_73870.known	chr17	-	2375	5	FSM	ENSG00000132517.15	ENST00000254853.10	2375	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCTAGTGTGCAATTA	1	True	NA	NA	False	ATTAAA	-17	NA	5035426	5032601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5033170_5033260_5033385_5033478_5034359_5034476_5034714_5034860
transcript_73871.known	chr17	+	4987	2	FSM	ENSG00000180787.6	ENST00000318833.4	4987	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGCCTTTGTCATGTT	-16	True	NA	NA	False	AATAAA	-24	NA	5078466	5096374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5078576_5091496
transcript_73877.known	chr17	-	2179	5	FSM	ENSG00000167840.13	ENST00000250076.7	2179	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.9441342542496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTTGGATGCAAGTA	16	False	NA	-22	True	NA	NA	NA	5123102	5105634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799_5112352_5122976
transcript_7388.known	chr1	-	7937	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.02654919008431	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAGTATCTGTGGCAT	4	True	NA	-6	True	ATTAAA	-35	NA	37859592	37809573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
transcript_73881.known	chr17	-	1553	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	16.9558249578132	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	18	True	NA	-43	True	NA	NA	NA	5111845	5105772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
transcript_73882.known	chr17	+	452	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	16	1	-15	-1	multi-exon	FALSE	canonical	3	112	junction_1	152.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	-17	True	NA	15	True	AATAAA	-20	NA	5111941	5114382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5112102_5113385_5113453_5114157
transcript_73883.known	chr17	-	4863	2	FSM	ENSG00000180626.10	ENST00000575779.2	4863	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTTTAGTATG	-16	True	NA	-3	True	AATAAA	-17	NA	5191868	5179534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5184277_5191747
transcript_73888.known	chr17	+	5909	18	FSM	ENSG00000029725.17	ENST00000537505.6	5909	18	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_8	42.0262728832423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAATGTTGAAACATCT	9	True	NA	26	True	AATAAA	-30	NA	5282283	5386340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176_5378233_5380363_5380463_5381388_5381506_5383121
transcript_73895.nic	chr17	+	958	5	NIC	ENSG00000029725.17	novel	2490	17	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	124.398553046247	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTTGCTTCCTCCCTC	-16	True	NA	5	True	AATAAA	-18	NA	5282258	5336689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5336487
transcript_73896.nic	chr17	+	1337	5	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-228	44624	-6	1910	5prime_fragment	FALSE	canonical	3	234	junction_4	35.8712977183709	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGAGATGGTTTTGC	-16	True	NA	NA	False	AATAAA	-23	NA	5282258	5338599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018
transcript_73898.nic	chr17	+	723	4	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-228	47912	-6	-1378	5prime_fragment	FALSE	canonical	3	308	junction_2	9.42809041582063	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAGGAAAATTTAGAAAA	-16	True	NA	5	True	NA	NA	NA	5282258	5335311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183
transcript_73906.known	chr17	-	3611	17	FSM	ENSG00000108559.12	ENST00000573584.6	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	418	junction_6	49.7540434914591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATATGTTTCCTTTAT	0	True	NA	-85	True	AATAAA	-17	NA	5419662	5384832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_73907.known	chr17	-	2194	17	FSM	ENSG00000108559.12	ENST00000225696.8	2194	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	122.877463734201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTGTGGTTCATCT	196	False	NA	-25	True	TATAAA	-15	NA	5419466	5386101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387953_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_7392.known	chr1	-	4450	24	FSM	ENSG00000204084.13	ENST00000373024.8	4450	24	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	87.5329589559937	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-14	True	NA	-2	True	GATAAA	-17	NA	37947053	37860696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
transcript_73931.known	chr17	-	5535	12	FSM	ENSG00000005100.13	ENST00000225296.8	5535	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	3.24737656354395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTGTGTGGCTTGTT	11	True	NA	-7	True	ATTAAA	-14	NA	5468982	5440916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5463528_5463690_5468570
transcript_73935.known	chr17	-	2081	11	FSM	ENSG00000108559.12	ENST00000574867.5	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_7	45.5126356081473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGTTGCAGTGAGC	0	True	NA	NA	False	NA	NA	NA	5419662	5388375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_73938.known	chr17	-	2040	11	FSM	ENSG00000005100.13	ENST00000574023.1	2040	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	3.52278299076171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCCTGACTTCCAGGA	164	False	5468840	NA	False	NA	NA	NA	5468829	5444097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5468570
transcript_73942.known	chr17	+	995	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	199.660267009293	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	-8	True	NA	5	True	AATAAA	-16	NA	5420181	5432877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
transcript_73947.known	chr17	+	1394	6	FSM	ENSG00000129197.15	ENST00000381208.9	1394	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	263.455954573056	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5432541
transcript_73949.known	chr17	+	1471	6	FSM	ENSG00000129197.15	ENST00000539417.6	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	293.834919640263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5428070_5428212_5432541
transcript_73951.known	chr17	+	1688	6	FSM	ENSG00000129197.15	ENST00000571613.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_4	189.100396615131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5428070_5428212_5432541
transcript_73952.known	chr17	+	1423	6	FSM	ENSG00000129197.15	ENST00000571558.5	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	268.521433036545	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5428070_5428212_5432541
transcript_73958.known	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	5817	junction_4	306.41775405482	3165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-34	True	NA	-4	True	CATAAA	-20	NA	5439155	5432776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
transcript_7396.known	chr1	-	3905	18	FSM	ENSG00000204084.13	ENST00000373027.5	3905	18	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_7	25.4374869817094	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-15	True	NA	-2	True	GATAAA	-17	NA	37931749	37860696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672
transcript_73963.known	chr17	+	815	5	FSM	ENSG00000129197.15	ENST00000327154.10	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	315.623589105757	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCATTCCCTCTGAGG	398	False	NA	-72	True	NA	NA	NA	5419887	5432608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5432541
transcript_73965.known	chr17	+	1547	5	FSM	ENSG00000129197.15	ENST00000571043.5	1547	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	272.371414616145	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5432541
transcript_73967.known	chr17	+	2728	5	FSM	ENSG00000129197.15	ENST00000573126.1	2728	5	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_4	183.704926444557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCGACATCTGTTCTT	10	True	NA	24	True	AAGAAA	-7	NA	5420199	5432704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5428212_5432541
transcript_73968.known	chr17	+	1282	5	FSM	ENSG00000129197.15	ENST00000573577.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	338.584830581643	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5432541
transcript_73970.known	chr17	+	1359	5	FSM	ENSG00000129197.15	ENST00000575599.5	1359	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	328.80883503945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5428070_5428212_5432541
transcript_73975.known	chr17	+	1057	4	FSM	ENSG00000129197.15	ENST00000536255.6	1057	4	0	0	0	0	multi-exon	TRUE	canonical	3	275	junction_3	248.210931803309	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTTGGTCTTTTGTG	151	False	NA	35	True	AAGAAA	-18	NA	5419640	5432715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541
transcript_73981.known	chr17	+	597	3	FSM	ENSG00000129197.15	ENST00000572174.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_2	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGTAAGATAGTAGTAT	9	True	NA	NA	False	NA	NA	NA	5420166	5423069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768
transcript_73982.known	chr17	-	767	3	FSM	ENSG00000108561.8	ENST00000573406.1	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	5817	junction_1	93.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCCGTCTCTACTAAA	-34	True	NA	NA	False	NA	NA	NA	5439155	5434664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5434967_5438122_5438274_5438841
transcript_73986.known	chr17	+	732	2	FSM	ENSG00000129197.15	ENST00000575711.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTGCCACCATGC	-1	True	NA	NA	False	NA	NA	NA	5420188	5421924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295
transcript_73990.nic	chr17	-	1123	8	NIC	ENSG00000072849.11	novel	657	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	388.397965483648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTCACTGTAT	-11	True	NA	-52	True	AATAAA	-9	NA	5486186	5474308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_5474790_5480053_5480145_5480386_5480544_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_73994.known	chr17	-	4167	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_2	52.2390339369582	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATCTGGTATTTTTAA	-3	True	NA	-2	True	AATAAA	-25	NA	5486178	5471253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_73997.known	chr17	-	570	6	FSM	ENSG00000072849.11	ENST00000571476.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	355.707520302847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGCTTCGCCTGGGGTG	660	False	NA	NA	False	NA	NA	NA	5486148	5474726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5482808_5482883_5485150_5485217_5486068
transcript_74.known	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_10792_10882_11243_11403
transcript_7400.known	chr1	-	2774	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_7	109.103090584089	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-8	True	NA	-6	True	AATAAA	-18	NA	37990022	37956974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_74000.known	chr17	-	589	4	FSM	ENSG00000072849.11	ENST00000572834.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	414.185412050637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATATCCTGCCA	13	True	NA	NA	False	NA	NA	NA	5486162	5474451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5474790_5480053_5480145_5485150_5485217_5486068
transcript_74001.known	chr17	+	2502	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	23.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	-13	True	NA	28	True	ATTAAA	-16	NA	5486565	5490811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5486685_5488195_5488590_5488822
transcript_74003.known	chr17	+	2204	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	11	True	NA	-46	True	AATGAA	-24	NA	5486395	5490737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5486685_5488822
transcript_74004.known	chr17	-	1500	2	FSM	ENSG00000286190.2	ENST00000568641.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTCTCCATTAATT	-7	True	NA	-16	True	AATAAA	-23	NA	5501006	5499426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5499951_5500030
transcript_74005.known	chr17	+	5884	9	FSM	ENSG00000179314.16	ENST00000574946.5	5884	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.0377208926183	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	NA	False	NA	20	True	AATAAA	-18	NA	6069105	6124427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6069208_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
transcript_74006.known	chr17	+	6056	9	FSM	ENSG00000179314.16	ENST00000317744.10	6056	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	8.12403840463596	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	-8	True	NA	20	True	AATAAA	-18	NA	6070378	6124427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6070653_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
transcript_74007.nnic	chr17	+	2773	9	NNC	ENSG00000179314.16	novel	2168	7	NA	NA	360	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	17.4028553691628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCCTCTCTTTTCTCT	187	False	NA	39	True	CATAAA	-40	NA	6070738	6121301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_6070856_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
transcript_74008.known	chr17	+	2129	9	FSM	ENSG00000179314.16	ENST00000574232.5	2129	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.0377208926183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGCGCTCCCCACTCT	19	False	NA	NA	False	NA	NA	NA	6071107	6120710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6071172_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
transcript_7401.known	chr1	-	1656	6	FSM	ENSG00000183386.10	ENST00000373016.4	1656	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	27.1691000955129	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	-11	True	NA	-9	True	AATAAA	-14	NA	38005514	37996769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005356
transcript_74017.known	chr17	+	891	7	FSM	ENSG00000129195.16	ENST00000570337.6	891	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	393.832204822759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCCTGTCTGACCGCCA	20	False	NA	NA	False	AAAAAG	-22	NA	6444442	6450365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6449703_6449779_6450027_6450073_6450361
transcript_7402.known	chr1	-	1091	6	FSM	ENSG00000183386.10	ENST00000477194.5	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	59.1046529471242	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACCTCTGGGACTCA	7147	False	NA	NA	False	NA	NA	NA	38005606	37997344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005438
transcript_74022.known	chr17	+	1908	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	326.120223230636	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	1	True	NA	7	True	AATAAA	-18	NA	6444454	6451469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_74025.known	chr17	+	1002	5	FSM	ENSG00000129195.16	ENST00000571373.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	399.257122666584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTCTGATCTTGTGTA	20	False	NA	NA	False	NA	NA	NA	6444442	6449938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6449703
transcript_74027.known	chr17	+	1473	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	398.066812859349	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCCCTTTCACCGG	18	False	NA	23	True	AATAAA	-17	NA	6444440	6451065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
transcript_7403.known	chr1	-	1468	5	FSM	ENSG00000183386.10	ENST00000485803.5	1468	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	82.7477341079501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	1	True	NA	-9	True	AATAAA	-14	NA	38005502	37996769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_38005356
transcript_74035.known	chr17	-	4647	19	FSM	ENSG00000198920.11	ENST00000361413.8	4647	19	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_18	7.33501664182178	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGCATTGCTCTCCGTG	177	False	6640730	-16	True	AATAAA	-24	NA	6640711	6578146	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6640636
transcript_74037.known	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_3	332.862667710808	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	0	True	NA	-41	True	NA	NA	NA	6641059	6644541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
transcript_74038.known	chr17	+	459	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1579.9874120455	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGGCATGTGT	0	True	NA	10	True	AATAAA	-41	NA	6641015	6643114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
transcript_74039.known	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	1475.55029282863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	185	False	NA	-6	True	NA	NA	NA	6640984	6643067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
transcript_74040.known	chr17	-	593	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	70	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	6130	False	NA	-12	True	AATAGA	-31	NA	6651634	6644278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6644660_6650355_6650434_6651500
transcript_74041.known	chr17	-	3231	12	FSM	ENSG00000141485.17	ENST00000433363.7	3231	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	4.51809950537788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCACTGTGCTGCTGACT	-2	True	NA	-11	True	ATTAAA	-21	NA	6713369	6684718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6686339_6687528_6687667_6690778_6690941_6693043_6693163_6694096_6694198_6695725_6695942_6701003_6701127_6702969_6703139_6703877_6704057_6706641_6706779_6707027_6707157_6713231
transcript_74042.known	chr17	-	1723	11	FSM	ENSG00000141485.17	ENST00000573648.5	1723	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	4.88364617882991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCACACACCACCAAAACC	NA	False	NA	NA	False	NA	NA	NA	6713377	6686096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6686339_6690778_6690941_6693043_6693163_6694096_6694198_6695725_6695942_6701003_6701127_6702969_6703139_6703877_6704057_6706641_6706779_6707027_6707157_6713231
transcript_7405.known	chr1	-	882	4	FSM	ENSG00000183386.10	ENST00000475084.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	95.2237131997884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCTGGACTCCAGAAT	1	True	NA	NA	False	NA	NA	NA	38005502	37997185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37998973_37999149_38005356
transcript_74057.known	chr17	-	1730	3	FSM	ENSG00000215067.11	ENST00000399540.2	1730	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAAATTAGCC	-2	True	NA	NA	False	NA	NA	NA	7012342	7001131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7002621_7009795_7009890_7012195
transcript_74058.known	chr17	-	1224	1	FSM	ENSG00000215067.11	ENST00000666062.1	1224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTAGTTCTTGTCCATT	7121	False	NA	NA	False	AATAAA	-22	NA	7012530	7011306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7011300_7012500
transcript_74059.known	chr17	+	2392	14	FSM	ENSG00000108839.12	ENST00000251535.11	2392	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.23076923076923	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTAGTCTTCTTTTGGT	-1	True	NA	21	True	AATAAA	-35	NA	6996048	7010754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6998952_6999057_6999305_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
transcript_74066.known	chr17	+	850	6	FSM	ENSG00000258315.5	ENST00000439424.6	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	67.8987481475174	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	-16	True	NA	30	True	AATAAA	-14	NA	7014781	7017520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_74070.known	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	254.37410933505	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	-4	True	NA	16	True	AAAACA	-5	NA	7014752	7017506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
transcript_74074.known	chr17	+	760	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	239.804086704126	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	12	False	NA	29	True	AATAAA	-13	NA	7014768	7017519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
transcript_74077.known	chr17	+	783	4	FSM	ENSG00000219200.12	ENST00000549393.2	783	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	772.124486221116	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTCTTCAGCCCTGT	11	True	NA	18	True	AATAAA	-6	NA	7012647	7014519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7012762_7013318_7013536_7013665_7013743_7014144
transcript_74081.known	chr17	+	591	3	FSM	ENSG00000219200.12	ENST00000552039.2	591	3	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	681.5	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	-5	True	NA	31	True	AATAAA	-19	NA	7012631	7014532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7012758_7013665_7013743_7014144
transcript_74085.known	chr17	+	2343	3	FSM	ENSG00000258315.5	ENST00000549857.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_2	62	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTCTGCTTAACATTA	-3	True	NA	35	True	AATAAA	-19	NA	7014753	7017525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7017015_7017260
transcript_74086.known	chr17	+	1485	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	9	True	NA	31	True	AATAAA	-19	NA	7012645	7014532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7013743_7014144
transcript_74087.known	chr17	+	739	3	FSM	ENSG00000219200.12	ENST00000552321.2	739	3	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	794.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	1	True	NA	19	True	AATAAA	-7	NA	7013230	7014520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7013517_7013665_7013743_7014144
transcript_74089.known	chr17	+	3527	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	4.23526858652435	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	-1	True	NA	12	True	AATAAA	-18	NA	7023049	7029644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
transcript_74090.nic	chr17	+	1984	9	NIC	ENSG00000161940.11	novel	3527	9	NA	NA	-124	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	10.4761634198785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTGTCTTCTGTTGCTT	5641	False	NA	2	True	NA	NA	NA	7022925	7030290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7029815
transcript_74093.known	chr17	+	1804	4	FSM	ENSG00000174327.7	ENST00000308027.7	1804	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGAGGACTCT	7	True	NA	NA	False	GGGGCT	-25	NA	7036014	7040117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7036582_7036726_7036871_7038151_7038890_7039762
transcript_7410.known	chr1	+	2023	8	FSM	ENSG00000183520.12	ENST00000373014.5	2023	8	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_4	62.9713248637985	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATAGTGTTTTATCTAG	3	True	NA	19	True	AATAAA	-16	NA	38012733	38024820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38012866_38016358_38016421_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
transcript_74104.known	chr17	-	944	8	FSM	ENSG00000141505.12	ENST00000380920.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	11.2231539093728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAAGGATAGGGTGA	1436	False	NA	-87	True	NA	NA	NA	7178116	7173552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178084
transcript_74105.nnic	chr17	-	1101	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	9.58740670603572	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	1358	False	NA	-5	True	AGTAAA	-17	NA	7178194	7173430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178127
transcript_74106.nic	chr17	-	1902	7	ISM	ENSG00000141505.12	ENST00000380920.8	944	8	-78	-122	-78	0	intron_retention	FALSE	canonical	3	17	junction_6	7.0099136149377	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	1358	False	NA	-5	True	AGTAAA	-17	NA	7178194	7173430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209
transcript_74111.nic	chr17	-	1972	6	NIC	ENSG00000141505.12	novel	1310	9	NA	NA	-78	0	intron_retention	FALSE	canonical	3	17	junction_5	6.65131565932636	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	1358	False	NA	-5	True	AGTAAA	-17	NA	7178194	7173430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_7173834_7173960_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209
transcript_74113.known	chr17	-	4100	22	FSM	ENSG00000132535.22	ENST00000399510.8	4100	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	12.3196283479002	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	-9	True	NA	NA	False	NA	NA	NA	7219836	7189889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7190815_7191266_7191359_7191892_7192003_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204059_7204198_7204253_7208173_7208240_7218240_7218282_7218540_7218640_7218830
transcript_74114.known	chr17	-	3505	21	FSM	ENSG00000132535.22	ENST00000491753.2	3505	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	13.3435377617782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGTCACCCCTGCCCT	403	False	NA	NA	False	NA	NA	NA	7219738	7190285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7190815_7191266_7191359_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204068_7204198_7204253_7208173_7208240_7218240_7218282_7218540_7218640_7218830
transcript_74126.known	chr17	+	2184	20	FSM	ENSG00000072778.20	ENST00000356839.10	2184	20	0	0	0	0	multi-exon	FALSE	canonical	2	451	junction_10	144.149737476016	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	15	True	NA	15	True	AATAAA	-17	NA	7219937	7225266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_74147.nic	chr17	+	2520	19	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	4	0	intron_retention	FALSE	canonical	2	452	junction_8	117.159382840873	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	-5	True	NA	13	True	AATAAA	-15	NA	7219866	7225264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_74155.known	chr17	+	2191	19	FSM	ENSG00000072778.20	ENST00000350303.9	2191	19	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	232.920560823473	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	-9	True	NA	13	True	AATAAA	-15	NA	7219862	7225264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220047_7220121_7220198_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_7416.known	chr1	+	573	5	FSM	ENSG00000224592.5	ENST00000428151.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.6583123951777	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGGGCTTCAGAGCAC	277	False	NA	NA	False	NA	NA	NA	38047424	38119025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38047615_38102416_38102497_38103545_38103662_38105631_38105753_38118959
transcript_74160.known	chr17	-	3077	19	FSM	ENSG00000132535.22	ENST00000649520.1	3077	19	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	12.4434523414059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTGGTGTGTGGCCT	31	True	NA	NA	False	NA	NA	NA	7205130	7189894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7190815_7191266_7191359_7191892_7192003_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204068_7204198_7204253_7204945
transcript_7417.known	chr1	+	675	3	FSM	ENSG00000228436.4	ENST00000663032.2	770	3	0	95	0	35	multi-exon	FALSE	canonical	1	1	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGATGACTGAGATTA	15	False	NA	NA	False	AATAAA	-26	NA	38859911	38919431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38860240_38913539_38913629_38919173
transcript_74175.nic	chr17	+	2618	18	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	782	junction_1	69.789153538047	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	-8	True	NA	13	True	AATAAA	-15	NA	7219863	7225264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222303_7222666_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_7420.known	chr1	-	2681	7	FSM	ENSG00000116954.8	ENST00000373001.4	2681	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	12.7671453348037	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTCTCCTTGCCTG	-5	True	NA	0	True	AATAAA	-17	NA	38859772	38838197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_38839705_38845938_38846088_38851614_38851758_38852373_38852489_38855707_38855908_38856878_38857083_38859409
transcript_7421.known	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	36.779749863206	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	7	True	NA	-4	True	ATTAAA	-17	NA	38873348	38862492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
transcript_74218.nic	chr17	+	2975	17	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	-7	0	intron_retention	FALSE	canonical	3	782	junction_1	70.195152076194	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	-1	True	NA	13	True	AATAAA	-15	NA	7219870	7225264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_7424.known	chr1	-	1883	8	FSM	ENSG00000158315.11	ENST00000372990.6	1883	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.55550625999976	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTCCTGATAATCA	-14	True	NA	NA	False	AATAAA	-16	NA	38941830	38885806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_38886684_38887962_38888025_38893163_38893225_38895968_38896070_38911321_38911435_38915561_38915711_38918966_38919338_38941681
transcript_7429.known	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2739	junction_1	54.4902514216993	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	-1	True	NA	50	True	ATTAAA	-19	NA	38991275	39006059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
transcript_7433.known	chr1	+	1243	4	FSM	ENSG00000174574.16	ENST00000446189.6	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	1261.68943176291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTTAGGTTAATTCTT	11	True	NA	NA	False	NA	NA	NA	38991287	39004761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38991601_38998170_38998312_39003346_39003419_39004044
transcript_74347.known	chr17	+	633	4	FSM	ENSG00000072778.20	ENST00000582356.5	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	33.8657480190367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGAACGATCCCGCCA	-12	True	NA	NA	False	NA	NA	NA	7219859	7220922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220047_7220121_7220198_7220463_7220677_7220765
transcript_74351.known	chr17	+	2352	19	FSM	ENSG00000072778.20	ENST00000322910.9	2352	19	0	0	0	0	multi-exon	FALSE	canonical	2	451	junction_9	147.731456817204	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTGCTCCTGTGTGAC	2734	False	NA	14	True	AATAAA	-16	NA	7219843	7225265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_74352.known	chr17	-	1894	2	FSM	ENSG00000132535.22	ENST00000489885.1	1894	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	14	True	NA	NA	False	NA	NA	NA	7192235	7189889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7190815_7191266
transcript_74356.nnic	chr17	-	3089	16	NNC	ENSG00000004975.12	novel	2989	15	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	182.96173248949	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	8450	False	NA	-7	True	AATAAA	-18	NA	7234551	7225341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_7226314_7226420_7226640_7226892_7226959_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230156_7230284_7230431_7230727_7230798_7234068
transcript_74368.known	chr17	-	2659	15	FSM	ENSG00000004975.12	ENST00000575458.5	2659	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	146.628104469805	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGACAGCAGCCTGAGGA	8683	False	NA	-64	True	NA	NA	NA	7234318	7225454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230138_7230284_7230431_7230727_7230798_7234068
transcript_7437.known	chr1	+	1330	4	FSM	ENSG00000174574.16	ENST00000372984.8	1330	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1344.02289993718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTGAACCTCTAAAGGG	11	True	NA	NA	False	NA	NA	NA	38991287	39004854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38991601_39000971_39001107_39003346_39003419_39004044
transcript_74430.known	chr17	-	1240	4	FSM	ENSG00000004975.12	ENST00000572285.5	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTCCACAGAGAAGTAC	8778	False	NA	NA	False	GGGGCT	-17	NA	7234223	7229286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7230156_7230284_7230431_7230727_7230798_7234068
transcript_74436.known	chr17	-	995	3	FSM	ENSG00000004975.12	ENST00000576949.1	995	3	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAGACAGAAACCGAGT	-16	True	NA	NA	False	NA	NA	NA	7234517	7230122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7230156_7230284_7230798_7234068
transcript_7444.known	chr1	+	544	3	FSM	ENSG00000168653.11	ENST00000372967.3	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	1745.5	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGACTTTCTTTTCTTTT	-18	True	NA	50	True	AATAAA	-38	NA	39026317	39034636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39026399_39028722_39028941_39034391
transcript_7445.known	chr1	+	495	3	FSM	ENSG00000168653.11	ENST00000372969.8	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	3429	junction_1	1351.5	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTATTTTCTCTTGG	14	True	NA	29	True	AATAAA	-17	NA	39026349	39034615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39026403_39028722_39028941_39034391
transcript_74454.known	chr17	-	1768	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	253.626078115008	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCCTGCTCG	4	True	NA	-4	True	AATAAA	-26	NA	7239439	7235028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
transcript_74461.known	chr17	-	1662	5	FSM	ENSG00000040633.13	ENST00000454255.6	1662	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	278.172046582686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCCCCTCCCTCATCT	4071	False	NA	-28	True	TATAAA	-18	NA	7238930	7235286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7238785
transcript_74463.known	chr17	-	1978	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_4	89.0066710982946	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-14	True	NA	-13	True	AATAAA	-17	NA	7239457	7235037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
transcript_7447.known	chr1	+	19141	64	FSM	ENSG00000127603.32	ENST00000289893.8	19141	64	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.557645000874	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCCTGATTTTC	2721	False	NA	NA	False	ATTAAA	-21	NA	39331137	39486987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39336654_39337181_39337332_39340501_39340718_39340803_39340954_39346976_39347211_39349477_39349628_39350784_39351019_39353006_39353232_39357374_39357894_39358696_39358874_39359140_39359265_39360792_39361002_39361359_39361678_39368147_39368315_39370029_39370187_39372478_39372597_39378460_39378524_39379202_39379445_39380243_39380374_39381952_39382153_39385433_39385930_39387186_39388659_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39436481_39436491_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39465094_39465113_39468614_39468733_39479797_39480010_39484600_39484731_39485537
transcript_74476.known	chr17	-	1944	4	FSM	ENSG00000040633.13	ENST00000576955.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	305.911025554091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-12	True	NA	-13	True	AATAAA	-17	NA	7239455	7235037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7239245
transcript_74485.known	chr17	+	1304	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	252	-34	-3	0	multi-exon	FALSE	canonical	3	40	junction_1	222.044160866707	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	1074	False	NA	NA	False	AATAAA	-19	NA	7252052	7259931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_74486.known	chr17	+	1389	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	225.729373365541	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	19	False	NA	NA	False	AATAAA	-28	NA	7252231	7259940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_74489.known	chr17	-	1549	9	FSM	ENSG00000175826.12	ENST00000318988.10	1549	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	211.240976138627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTGTGATTTGATTT	12	True	NA	-16	True	NA	NA	NA	7251961	7243838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194_7251602_7251798
transcript_74494.known	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	201	junction_6	202.846679810649	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_74495.known	chr17	-	1767	8	FSM	ENSG00000175826.12	ENST00000574322.6	1767	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_4	55.8964056381563	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-13	True	NA	-6	True	TTTAAA	-27	NA	7251734	7243590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
transcript_74497.known	chr17	+	827	7	FSM	ENSG00000170291.16	ENST00000356683.7	2404	7	285	1292	-32	-143	multi-exon	FALSE	canonical	3	40	junction_1	237.844487007793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTAGAGTCCCAGCCC	1045	False	NA	NA	False	NA	NA	NA	7252023	7258639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_74498.known	chr17	+	937	7	FSM	ENSG00000170291.16	ENST00000576496.5	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	203.041388774692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAATGGCAGAGGACCT	16	True	NA	NA	False	NA	NA	NA	7252554	7259079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825
transcript_74499.known	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	245.664687916047	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	-14	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
transcript_7450.nic	chr1	+	4648	34	NIC	ENSG00000127603.32	novel	4338	32	NA	NA	-67	1727	combination_of_known_junctions	FALSE	canonical	3	22	junction_30	8.86414139975333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTATTAAATGAGAGATT	7	True	NA	NA	False	ATTAAA	-37	NA	39105343	39324735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_39105718_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909_39323009_39324192_39324346_39324645
transcript_74501.known	chr17	+	2197	7	ISM	ENSG00000170291.16	ENST00000396627.7	1389	9	-31	9	-14	0	intron_retention	FALSE	canonical	3	19	junction_1	243.109543210463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	-12	True	NA	NA	False	AATAAA	-19	NA	7252200	7259931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_74502.known	chr17	+	2209	6	FSM	ENSG00000170291.16	ENST00000574993.6	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	194.8790394065	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_74510.known	chr17	+	671	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	255.198452189664	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTTTTGACTTTTT	1077	False	NA	39	True	AATAAA	-27	NA	7252055	7254913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_74511.known	chr17	+	473	5	FSM	ENSG00000170291.16	ENST00000570500.6	473	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	268.801506692206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCCTTTCCTGGGGGGC	24	False	NA	NA	False	NA	NA	NA	7252236	7254633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252346_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_74513.known	chr17	-	605	5	FSM	ENSG00000181885.18	ENST00000575313.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	656.774504681782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCCTGGGAGGTGCAC	0	True	NA	NA	False	NA	NA	NA	7263200	7260488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262086_7263158
transcript_74516.known	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	630.434919321574	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	756	False	7263223	-52	True	AATAAA	-19	NA	7263213	7260136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
transcript_7452.known	chr1	+	6545	36	FSM	ENSG00000127603.32	ENST00000672812.1	6545	36	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_35	11.3991048699771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACAAGTTCAGGTAAAGA	-8	True	NA	NA	False	CATAAA	-16	NA	39158863	39333181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39159021_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909_39323009_39324192_39324346_39324645_39324735_39327217_39327354_39331202
transcript_74523.known	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	57.567351858497	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	97	False	NA	32	True	AATAAA	-20	NA	7252375	7254906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
transcript_74524.known	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	1006.68796886953	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	1	True	NA	-10	True	AATAAA	-32	NA	7241819	7240407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
transcript_74526.known	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_3	55.6496980125579	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	0	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
transcript_74530.known	chr17	-	583	3	FSM	ENSG00000170296.10	ENST00000570856.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	1211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTCTGTTCCCTTTC	33	True	NA	NA	False	NA	NA	NA	7242358	7240573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7240920_7241341_7241461_7242240
transcript_74533.known	chr17	-	1724	9	FSM	ENSG00000175826.12	ENST00000573600.5	1724	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	201.96251972829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGCATTATAACTTTGA	9033	False	NA	17	True	NA	NA	NA	7252081	7243617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194_7251602_7251964
transcript_74534.known	chr17	+	3375	11	FSM	ENSG00000181856.15	ENST00000317370.13	3375	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	4.73392015141785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGCCTGTTTTTGTTTT	-17	True	NA	NA	False	AAAACA	-25	NA	7281717	7288257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704_7285909_7286425
transcript_74537.known	chr17	+	2995	11	FSM	ENSG00000181856.15	ENST00000572485.5	2995	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	6.42572953056694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTATTGTGGAGGTAC	0	True	NA	27	True	TATAAA	-18	NA	7281734	7287833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7285001_7285087_7285190_7285704_7285909_7286425
transcript_74539.known	chr17	+	1768	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.64471543707927	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGCATTAATACTACAA	1	True	NA	-8	True	AATAAA	-8	NA	7281735	7286151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
transcript_74551.known	chr17	-	1654	9	FSM	ENSG00000006047.13	ENST00000007699.10	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	19.6198241582334	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-21	True	NA	-21	True	AGTAAA	-14	NA	7294639	7288262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092_7291183_7292025_7292060_7293474_7293539_7294229
transcript_74561.known	chr17	-	4553	6	FSM	ENSG00000006047.13	ENST00000571485.5	4553	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	15.3805071437843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	29	False	NA	-21	True	AGTAAA	-14	NA	7294589	7288262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092
transcript_74562.known	chr17	-	5207	29	FSM	ENSG00000215041.10	ENST00000399464.7	5207	29	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	16.0469257657226	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCGGCCTCTCTCTCGC	5	True	NA	-3	True	AATAAA	-18	NA	7329335	7315627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322947_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324271_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327164_7327231_7327439_7327885_7329030
transcript_74564.known	chr17	-	4890	28	FSM	ENSG00000215041.10	ENST00000570460.5	4890	28	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_26	19.0308391697837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTCTGATGGGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	7329393	7315930	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322953_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324271_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327439_7327885_7329030
transcript_74578.known	chr17	-	1176	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_10	182.755574470384	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	-8	True	NA	-8	True	AATAAA	-16	NA	7315360	7312660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
transcript_7459.nic	chr1	+	1267	10	ISM	ENSG00000127603.32	ENST00000524432.5	4338	32	-67	38613	-67	175	5prime_fragment	FALSE	canonical	3	31	junction_5	5.51317165780235	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTGAGGAATTATA	7	True	NA	29	True	AATATA	-45	NA	39105343	39284395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_39105718_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332
transcript_74592.known	chr17	-	1977	8	FSM	ENSG00000132522.16	ENST00000571697.5	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_7	215.684766192114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTCCCAGGCCAATAAA	NA	False	NA	-43	True	NA	NA	NA	7315564	7312695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7312840_7313028_7313292_7313379_7313470_7313567_7313989_7314079_7314160_7314290_7314404_7314487_7315120_7315330
transcript_74596.known	chr17	+	1256	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	4199.86728361742	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	5	True	NA	-42	True	AATAAA	-28	NA	7306998	7312463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_74599.known	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	9070	junction_1	611.167603853477	3484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	-6	True	NA	-42	True	AATAAA	-28	NA	7307627	7312463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_74602.known	chr17	+	1271	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_1	3625.28407714485	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	-18	True	NA	38	True	AATAAA	-20	NA	7307973	7312455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_74604.known	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	4162.27963500772	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	12	True	NA	38	True	AATAAA	-20	NA	7308370	7312455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_74609.known	chr17	+	811	5	FSM	ENSG00000132507.18	ENST00000572815.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	9070	junction_1	681.213072393653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGAGCCTGGCCTGGCT	-8	True	NA	NA	False	NA	NA	NA	7307581	7311868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311652_7311821
transcript_74617.known	chr17	-	550	4	FSM	ENSG00000132522.16	ENST00000574201.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_3	231.230524705445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCTGCATACCAGCAG	4	True	NA	NA	False	NA	NA	NA	7315348	7314142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7314404_7314487_7314598_7314958_7315120_7315330
transcript_74622.known	chr17	-	1371	10	FSM	ENSG00000132522.16	ENST00000389167.9	1371	10	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_8	85.0071892384534	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	9	True	NA	-7	True	AATAAA	-17	NA	7315343	7312659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
transcript_74623.known	chr17	+	1439	7	FSM	ENSG00000132507.18	ENST00000576930.5	1439	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4945.42534121743	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	2	True	NA	38	True	AATAAA	-20	NA	7307539	7312455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7307753_7308480_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_74624.known	chr17	+	1366	7	FSM	ENSG00000132507.18	ENST00000571955.5	1366	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4945.42534121743	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	-18	True	NA	38	True	AATAAA	-20	NA	7307973	7312455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7308114_7308480_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_74629.known	chr17	+	2511	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	11.1948319790227	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	-14	True	NA	21	True	ATTAAA	-21	NA	7336528	7351477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_7463.known	chr1	+	5767	6	FSM	ENSG00000127603.32	ENST00000530275.3	5767	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	36.0976453525711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATACAGTGAAATTCAAGA	80	False	NA	NA	False	NA	NA	NA	39409502	39428092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39414478_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960
transcript_74640.nic	chr17	+	2474	21	NIC	ENSG00000072818.12	novel	2511	22	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	23.5390632778792	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	-35	True	NA	21	True	ATTAAA	-21	NA	7336507	7351477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7336788_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_74655.known	chr17	+	761	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	9.16515138991168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	6	False	NA	NA	False	ACTAAA	-14	NA	7336596	7342753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
transcript_74662.known	chr17	+	3051	1	FSM	ENSG00000213859.8	ENST00000576980.2	3051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTTGTGAAGGCTGTT	54	False	NA	8	True	AATAAA	-16	NA	7351888	7354939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7351900_7354900
transcript_74666.nic	chr17	+	2905	13	FSM	ENSG00000174292.13	ENST00000688331.1	2761	13	-149	5	103	0	multi-exon	FALSE	canonical	3	7	junction_1	8.35663409114778	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTACAAAGTTTATA	NA	False	NA	-19	True	NA	NA	NA	7380939	7389737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7381115_7382835_7383090_7383249_7383321_7383424_7383617_7383708_7383865_7383969_7384254_7384483_7384755_7386560_7386656_7386989_7387155_7387377_7387458_7388405_7388705_7388787_7388884_7388970
transcript_74678.known	chr17	-	1689	8	FSM	ENSG00000187838.17	ENST00000324822.15	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	73.1952937039545	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	9526	False	NA	-1	True	TATAAA	-26	NA	7394570	7389726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_74680.known	chr17	-	1740	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	95.6302195380147	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-9	True	NA	-1	True	TATAAA	-26	NA	7394842	7389726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_74685.known	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_3	41.1204193666467	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-1	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
transcript_74688.known	chr17	-	2032	8	FSM	ENSG00000187838.17	ENST00000574401.5	2032	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	80.1299964216311	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	26	True	NA	-7	True	TATAAA	-20	NA	7394807	7389732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394272_7394476
transcript_74689.known	chr17	-	1965	7	FSM	ENSG00000187838.17	ENST00000576201.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	50.3964835633951	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	-2	True	NA	-7	True	TATAAA	-20	NA	7394535	7389732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103
transcript_7469.known	chr1	-	2082	16	FSM	ENSG00000090621.15	ENST00000678625.1	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	150.36039667708	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	22	True	NA	18	True	NA	NA	NA	39575786	39560856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_74690.known	chr17	-	2310	5	FSM	ENSG00000187838.17	ENST00000571541.5	2310	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	45.9510609235521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTATGTAATAGGGG	9588	False	NA	-4	True	TATAAA	-23	NA	7394508	7389729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393510_7393600
transcript_74691.known	chr17	-	1605	7	FSM	ENSG00000187838.17	ENST00000576362.5	1605	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	88.6104144869865	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTAACTTTTTGGAC	9828	False	NA	-28	True	AAAAAG	-30	NA	7394268	7389753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392881_7393143_7393365_7393466_7393510_7393600_7393837_7394103
transcript_74692.known	chr17	-	2056	7	FSM	ENSG00000187838.17	ENST00000573774.5	2056	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	59.1992867824905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTATGTAATAGGGG	9531	False	NA	-4	True	TATAAA	-23	NA	7394565	7389729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7394268_7394476
transcript_74693.known	chr17	+	2560	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	32.5699247773156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	-25	True	NA	14	True	ATTAAA	-18	NA	7445060	7457710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_74699.known	chr17	+	1623	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	16.7994708911389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATCTTGAAGAAGCTC	-14	True	NA	NA	False	NA	NA	NA	7445502	7456926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_7470.known	chr1	-	3048	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_6	119.398194663441	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	162	False	NA	-10	True	AATAAA	-21	NA	39576744	39560815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_74715.known	chr17	+	928	5	FSM	ENSG00000161958.11	ENST00000575235.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	18.952242611364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTGGGCCTAGGAGG	-19	True	NA	NA	False	GGGGCT	-32	NA	7438272	7443331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7438531_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_74716.known	chr17	+	2578	5	FSM	ENSG00000161958.11	ENST00000293829.9	2578	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	20.0810856280232	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	-6	True	NA	23	True	ATTAAA	-20	NA	7439511	7444937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7439814_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_74718.known	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.1245437895437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	-4	True	NA	-12	True	NA	NA	NA	7440742	7444902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_74728.known	chr17	+	1981	3	FSM	ENSG00000181284.3	ENST00000323206.2	1981	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	43.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTCCAGCCTCGCTAT	-22	True	NA	NA	False	NA	NA	NA	7435434	7437679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7435697_7435852_7436086_7436193
transcript_74730.known	chr17	+	912	3	FSM	ENSG00000161958.11	ENST00000576328.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGTGTCTTTTTATC	-2	True	NA	NA	False	AAAAAG	-32	NA	7440772	7442532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7440817_7441470_7441582_7441775
transcript_74731.known	chr17	+	1962	2	FSM	ENSG00000181284.3	ENST00000396568.1	1962	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAAAGTGCCTCTGTGGG	-3	True	NA	25	True	ATTAAA	-17	NA	7435453	7437523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7436086_7436193
transcript_74733.known	chr17	-	5860	4	FSM	ENSG00000174282.12	ENST00000380599.9	5860	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCACAGTGGGATG	-2	True	NA	-17	True	AATAAA	-18	NA	7479631	7459377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7479455
transcript_74734.known	chr17	-	5956	4	FSM	ENSG00000174282.12	ENST00000311403.4	5956	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	21.1397466609439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGCCAGGTGCAATT	-22	True	NA	-5	True	AATAAA	-30	NA	7484263	7459365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7484003
transcript_74736.known	chr17	+	6751	29	FSM	ENSG00000181222.19	ENST00000617998.6	6751	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	171.558265672069	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACATCGAGTGCTTC	0	True	NA	98	True	AATAAA	-22	NA	7484365	7514616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280_7499492_7500638_7500849_7500939_7501109_7501288_7501384_7501525_7501730_7501899_7502123_7502517_7502702_7503120_7503293_7503384_7503491_7503585_7503792_7508250_7508476_7508943_7509191_7509531_7509633_7511214_7511320_7511405_7511589_7511810_7512015_7512157_7512345_7512476_7512591_7512773_7512924_7513020
transcript_7474.known	chr1	-	2122	15	FSM	ENSG00000090621.15	ENST00000677609.1	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	185.470293017067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	993	False	NA	18	True	NA	NA	NA	39575913	39560856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_74740.known	chr17	+	2083	10	FSM	ENSG00000181222.19	ENST00000572844.1	2083	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	225.962632112283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTTCAAATTTTATT	2	True	NA	NA	False	GATAAA	-16	NA	7484619	7499758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280
transcript_74745.known	chr17	+	1625	8	FSM	ENSG00000239697.11	ENST00000322272.11	1625	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	16.2040559296563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTCTTTATTGGGGC	-4	True	NA	NA	False	ATTAAA	-15	NA	7549057	7557890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7553586_7553826_7556777_7556903_7557098
transcript_74746.known	chr17	+	1377	7	FSM	ENSG00000239697.11	ENST00000293825.11	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.88075958812578	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	-4	True	NA	NA	False	ATTAAA	-6	NA	7549057	7557881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
transcript_74748.known	chr17	+	1811	6	FSM	ENSG00000161955.17	ENST00000338784.9	1811	6	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	5.41848687365763	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	8	True	NA	8	True	AATAAA	-16	NA	7558749	7561601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_7475.known	chr1	-	2470	15	FSM	ENSG00000090621.15	ENST00000372862.7	2470	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	156.564389831358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	653	False	NA	-10	True	AATAAA	-21	NA	39576253	39560815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_74755.known	chr17	-	2987	17	FSM	ENSG00000129245.12	ENST00000250113.12	2987	17	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_9	21.2888431754757	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTCCTGTGCCTTC	-26	True	NA	-1	True	AATAAA	-15	NA	7614897	7591229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7591926_7592253_7592355_7592503_7592600_7592693_7592895_7592983_7593182_7593402_7593626_7593917_7594005_7594237_7594348_7594678_7594758_7595823_7595995_7601408_7601526_7602908_7603003_7603756_7603906_7604008_7604081_7605644_7605739_7606096_7606150_7614451
transcript_74770.known	chr17	+	2567	11	FSM	ENSG00000161956.13	ENST00000321337.12	2567	11	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_10	34.1058645983356	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	-10	True	NA	28	True	AATAAA	-22	NA	7561918	7571969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372
transcript_74773.known	chr17	+	1758	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	996.406187254977	3024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGCTTCTCATTTCT	-1	True	NA	20	True	AATAAA	-18	NA	7572824	7579006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_74776.known	chr17	+	1319	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	3555.16880611878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	11	False	NA	-33	True	AATAAA	-35	NA	7572836	7578641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
transcript_74785.known	chr17	+	3519	21	FSM	ENSG00000277957.1	ENST00000614237.1	3519	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5515.87140237152	452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAATCCATTTCCCTAA	1296	False	NA	41	True	NA	NA	NA	7563286	7578715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372_7571480_7572283_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_74787.known	chr17	+	1645	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_9	3608.75604914245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAAACTGCCTGTT	16	False	NA	4	True	AATAAA	-2	NA	7572841	7578990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
transcript_7482.known	chr1	-	4077	5	FSM	ENSG00000163909.8	ENST00000372852.4	4077	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	6.53834841531101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGGTGAGATATCTT	-3	True	NA	-3	True	AATAAA	-20	NA	39639643	39623434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39639545
transcript_74821.known	chr17	+	917	7	FSM	ENSG00000129255.16	ENST00000572719.5	917	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	162.025460962159	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAGTGGAAACAAATGG	7	True	NA	NA	False	NA	NA	NA	7583859	7587685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586655_7586778_7586898_7587018_7587160_7587272_7587425
transcript_74823.known	chr17	+	809	7	FSM	ENSG00000129255.16	ENST00000576272.5	809	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	155.326537762654	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCCTCTGCACTTGC	32	False	NA	NA	False	NA	NA	NA	7583884	7587643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_74826.known	chr17	+	924	6	FSM	ENSG00000129255.16	ENST00000581886.5	924	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	169.427978799253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTTCTCCCCATCTGA	12	False	NA	NA	False	NA	NA	NA	7583864	7587595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587272_7587425
transcript_74827.known	chr17	+	591	6	FSM	ENSG00000129255.16	ENST00000570458.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	171.10628276016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCAGTAGAGCCAGCTACT	21	False	NA	NA	False	AAAAAG	-1	NA	7583873	7587542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7583966_7585731_7585798_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_7483.nnic	chr1	-	3372	5	NNC	ENSG00000163909.8	novel	4077	5	NA	NA	6621	-718	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	7.66077672302228	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTAGATTCTACTTC	6956	False	NA	-26	True	AATAAA	-24	NA	39633022	39624152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39632911
transcript_74831.known	chr17	-	974	6	FSM	ENSG00000141504.12	ENST00000380466.6	974	6	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	99.2298342233826	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGTGTTGGGTCTTT	-28	True	NA	NA	False	AATAAA	-17	NA	7627869	7626236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627552
transcript_74832.known	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	113.118345108121	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	20	True	NA	NA	False	AATAAA	-20	NA	7627821	7626233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
transcript_74837.known	chr17	+	1645	5	FSM	ENSG00000129255.16	ENST00000577088.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_4	21.1704392963396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATAATACAAAACTGTT	-1	True	NA	-22	True	AATAAA	-15	NA	7583851	7588177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7587272_7587425
transcript_74839.known	chr17	-	582	5	FSM	ENSG00000141504.12	ENST00000576686.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	91.3848318923879	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGCCCAAGATCTGAC	-35	True	NA	NA	False	NA	NA	NA	7627876	7626533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627552
transcript_74840.known	chr17	-	640	5	FSM	ENSG00000141504.12	ENST00000573566.1	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	114.298950126412	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGACTACGTCCACAG	36	True	NA	NA	False	NA	NA	NA	7627805	7626387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627569
transcript_74843.known	chr17	-	685	5	FSM	ENSG00000141504.12	ENST00000570850.5	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	143.858437361178	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGAAGCACTCTTCAG	39	False	NA	NA	False	NA	NA	NA	7627802	7626402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626706_7626794_7627142_7627227_7627362_7627415_7627552
transcript_74844.known	chr17	+	782	4	FSM	ENSG00000161960.16	ENST00000584712.5	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	1542.66918755196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGATGTCAGAGCATGT	0	True	NA	NA	False	NA	NA	NA	7572825	7575679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118
transcript_74850.known	chr17	+	716	3	FSM	ENSG00000161960.16	ENST00000584054.5	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	1683.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATCGATTCTGCAGCA	-2	True	NA	NA	False	NA	NA	NA	7572823	7575171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545
transcript_74854.known	chr17	+	562	2	FSM	ENSG00000161960.16	ENST00000580886.5	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTCATCCCAGCTTG	0	True	NA	-50	True	NA	NA	NA	7572825	7574782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259
transcript_74856.known	chr17	-	352	2	FSM	ENSG00000233223.4	ENST00000415124.1	352	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCTCATATTTATTTAT	6022	False	NA	0	True	AATAAA	-28	NA	7584072	7581963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582161_7583917
transcript_74858.known	chr17	-	679	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	259	504	12	-497	multi-exon	FALSE	canonical	3	18	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTGGACAGGACAGGA	27	True	NA	NA	False	NA	NA	NA	7583518	7582471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582532_7582899
transcript_74859.known	chr17	-	287	2	FSM	ENSG00000233223.4	ENST00000572046.2	1058	2	732	39	520	-37	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCGTCACATTTAATAA	7084	False	NA	-48	True	CATAAA	-35	NA	7583010	7582011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582164_7582875
transcript_74860.known	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	0	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7588547_7589143
transcript_74861.known	chr17	-	1563	1	FSM	ENSG00000141504.12	ENST00000576846.1	1563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	45	False	NA	NA	False	AATAAA	-20	NA	7627796	7626233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626200_7627800
transcript_74862.known	chr17	-	725	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	8	12	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGACTGCATTATCTC	0	True	NA	-12	True	AATAAA	-16	NA	7584086	7581975	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582532_7583917
transcript_74863.known	chr17	-	1050	3	FSM	ENSG00000129194.8	ENST00000538513.6	1050	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	22	False	NA	-5	True	ATTAAA	-19	NA	7590072	7588177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7588547_7589143_7589739_7589986
transcript_74866.known	chr17	+	3341	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	19.8221256848671	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	1	True	NA	16	True	AATAAA	-41	NA	7650925	7657770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
transcript_74870.nnic	chr17	+	2859	6	NIC	ENSG00000129244.9	novel	3341	7	NA	NA	-7	-360	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	121.768633071083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAATGCCCACAGAATG	-6	True	NA	NA	False	TTTAAA	-28	NA	7650918	7657410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7651631_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
transcript_74873.known	chr17	-	2653	12	FSM	ENSG00000141510.18	ENST00000420246.6	2653	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	108.897859490685	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGCCAGTGCAGGCTAC	7	True	NA	-2	True	AATAAA	-30	NA	7687481	7668403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7669691_7670608_7670716_7673206_7673340_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
transcript_74877.known	chr17	+	2657	11	FSM	ENSG00000141499.17	ENST00000498311.5	2657	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	74.4586462407154	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGTCTTCGTGTCTGT	165	False	NA	13	True	TATAAA	-15	NA	7687599	7703501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701426_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_74878.known	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	20.2605528058837	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	16	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_74884.nic	chr17	-	2652	11	NIC	ENSG00000141510.18	novel	2512	11	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_10	77.378033058485	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	9910	False	NA	-19	True	AATAAA	-13	NA	7677578	7668420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7677324
transcript_74886.known	chr17	-	2506	11	FSM	ENSG00000141510.18	ENST00000445888.6	2506	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	83.3076227004468	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	1	True	NA	-19	True	AATAAA	-13	NA	7687487	7668420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676620_7687376
transcript_74894.known	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	18.3491514251938	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_74899.known	chr17	-	2639	10	FSM	ENSG00000141510.18	ENST00000610292.4	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_9	22.7840099875134	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCAGTGCAGGCTACTG	7	True	NA	0	True	AATAAA	-32	NA	7687481	7668401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676623_7687376
transcript_7490.known	chr1	+	1198	11	FSM	ENSG00000084072.17	ENST00000372830.5	1198	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	300.769828939008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	18	False	NA	10	True	AATAAA	-18	NA	39738900	39763914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39762516_39762652_39763688
transcript_7492.known	chr1	+	4339	10	FSM	ENSG00000084072.17	ENST00000324379.10	4339	10	0	0	0	0	multi-exon	TRUE	canonical	3	622	junction_1	65.9951363714885	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTTTATTTGACTTG	-1	True	NA	NA	False	AATAAA	-17	NA	39738881	39756769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_7493.known	chr1	+	1079	10	FSM	ENSG00000084072.17	ENST00000356511.6	1079	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	238.685494808752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	2	True	NA	10	True	AATAAA	-18	NA	39738884	39763914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39763688
transcript_74930.known	chr17	-	1112	1	FSM	ENSG00000141510.18	ENST00000571370.1	1112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTACAATTCTTTTTG	1223	False	NA	-20	True	AATAAA	-14	NA	7686371	7685259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7685300_7686400
transcript_74936.known	chr17	+	3216	5	FSM	ENSG00000108947.5	ENST00000226091.3	3216	5	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_2	10.5475115548645	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGGCTGGAGAATGAC	-5	True	NA	16	True	AATAAA	-23	NA	7705201	7711372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7705721_7707957_7708251_7708434_7708528_7708634_7708740_7709166
transcript_74939.known	chr17	+	6728	24	FSM	ENSG00000132510.11	ENST00000448097.7	6728	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.2182116123906	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCGCTAACGGCTG	-14	True	NA	18	True	AATAAA	-14	NA	7834216	7854796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7834351_7839905_7840025_7844900_7845021_7845313_7845457_7845549_7845692_7845871_7845971_7846077_7846298_7846399_7846493_7846578_7846741_7846818_7847017_7847104_7847453_7847545_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209_7853381_7853497
transcript_74941.known	chr17	+	6713	22	FSM	ENSG00000132510.11	ENST00000254846.9	6713	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.08338794216874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCGCTAACGGCTG	569	False	NA	18	True	AATAAA	-14	NA	7839903	7854796	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7840025_7844900_7845021_7845313_7845457_7845549_7845692_7845871_7845971_7846077_7846298_7846399_7846493_7846578_7846741_7846818_7847017_7847104_7847453_7847545_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209
transcript_74944.known	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	1	True	NA	9	True	AATAAA	-17	NA	7855065	7856099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7855285_7855444
transcript_74945.known	chr17	+	3489	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	-31	True	NA	10	True	AATAAA	-18	NA	7858002	7862282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
transcript_74947.nnic	chr17	-	589	4	NIC	ENSG00000183011.14	novel	556	5	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	214.974417082591	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	5401	False	NA	-4	True	ATTAAA	-13	NA	7885309	7856684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_7856844_7857014_7857199_7883234_7883336_7885164
transcript_7495.known	chr1	+	1213	10	FSM	ENSG00000084072.17	ENST00000475350.5	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	278.763938366018	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	25	False	NA	30	True	AATAAA	-30	NA	39738907	39753716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
transcript_74950.known	chr17	+	538	3	FSM	ENSG00000182224.12	ENST00000574196.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATCCGGGATGAGGAG	251	False	NA	NA	False	NA	NA	NA	7858284	7859505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7858480_7858605_7858825_7859381
transcript_74951.known	chr17	-	553	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	116	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-43	True	NA	-4	True	ATTAAA	-13	NA	7857562	7856684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7856844_7856984_7857199_7857382
transcript_74952.known	chr17	-	520	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	89	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-40	True	NA	-4	True	ATTAAA	-13	NA	7857559	7856684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7856844_7857014_7857199_7857382
transcript_74953.known	chr17	+	579	2	FSM	ENSG00000182224.12	ENST00000574357.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTCGGACTGGGCCAA	-31	True	NA	NA	False	NA	NA	NA	7858002	7858689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7858295_7858402
transcript_74954.known	chr17	-	424	2	FSM	ENSG00000183011.14	ENST00000576384.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGACCGAATGGGCC	-59	True	NA	-18	True	NA	NA	NA	7857263	7856698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7856844_7856984
transcript_74958.nic	chr17	+	3093	20	NIC	ENSG00000170037.14	novel	3769	19	NA	NA	-125	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_1	39.7636368357376	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	1313	False	NA	15	True	AATAAA	-15	NA	7931975	7949576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7932139_7932927_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
transcript_74963.nic	chr17	+	3566	20	NIC	ENSG00000170037.14	novel	3769	19	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	38.8495927742591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	-35	True	NA	15	True	AATAAA	-15	NA	7932164	7949576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7932801_7932927_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
transcript_74970.nic	chr17	+	3722	19	NIC	ENSG00000170037.14	novel	3769	19	NA	NA	15	0	intron_retention	FALSE	canonical	3	20	junction_18	37.257197498364	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	1453	False	NA	15	True	AATAAA	-15	NA	7932115	7949576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949138_7949384
transcript_74971.known	chr17	+	2783	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_17	29.9281031477889	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	880	False	NA	17	True	AATAAA	-17	NA	7933079	7949578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
transcript_74972.known	chr17	+	3769	19	FSM	ENSG00000170037.14	ENST00000380262.7	3769	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	41.0859157027783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	1492	False	NA	15	True	AATAAA	-15	NA	7932154	7949576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948686_7949084_7949158_7949384
transcript_74986.known	chr17	-	2879	14	FSM	ENSG00000170049.10	ENST00000303790.3	2879	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	3.89962826327279	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTTGTACTTCTCA	-25	True	NA	NA	False	TTTAAA	-16	NA	7929856	7921858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7923180_7923455_7923545_7923710_7923832_7923967_7924063_7924144_7924266_7924414_7924501_7925096_7925184_7925682_7925727_7925930_7925976_7926058_7926104_7927343_7927424_7927656_7927695_7927782_7927827_7929193
transcript_74995.known	chr17	-	759	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	449.887208086649	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	1080	False	NA	-3	True	AATAAA	-20	NA	7931999	7930344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
transcript_74996.known	chr17	-	812	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_2	60.0721788073869	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	3	True	NA	-7	True	AATAAA	-16	NA	7931946	7930348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
transcript_74998.known	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	616.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	28	True	NA	NA	False	NA	NA	NA	7931921	7930503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7930735_7931010_7931150_7931730
transcript_75.known	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4568	junction_1	920.380718326208	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
transcript_75002.known	chr17	+	1804	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	NA	False	NA	4	True	AATAAA	-19	NA	8079481	8081565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8079525_8079804
transcript_75008.known	chr17	-	1694	4	FSM	ENSG00000179111.9	ENST00000541682.7	1694	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGTTTTTGTCTC	1	True	NA	3	True	AATAAA	-17	NA	8124106	8120591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8122038_8122342_8122431_8123030_8123127_8124042
transcript_75014.known	chr17	-	4676	23	FSM	ENSG00000179094.16	ENST00000317276.9	4676	23	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_22	12.1175373217416	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTTTGTGGAATGAAG	-8	True	NA	-4	True	GATAAA	-7	NA	8152404	8140471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
transcript_75015.nic	chr17	-	4798	23	NIC	ENSG00000179094.16	novel	4676	23	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_22	16.1137485571168	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTTTGTGGAATGAAG	7077	False	NA	-4	True	GATAAA	-7	NA	8156496	8140471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8156306
transcript_7502.known	chr1	+	842	7	FSM	ENSG00000084072.17	ENST00000372835.9	842	7	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_2	275.535035078219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTGAAGCAAGCAGCA	18	False	NA	NA	False	NA	NA	NA	39738900	39753444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738932_39740164_39740264_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_75021.nic	chr17	-	3395	18	ISM	ENSG00000179094.16	ENST00000582719.5	3677	22	-91	3255	0	0	5prime_fragment	FALSE	canonical	3	88	junction_17	11.5707542079666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGATTCTTCCCTGAA	-1	True	NA	0	True	AATAAA	-17	NA	8152435	8144054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
transcript_75028.known	chr17	-	2126	5	FSM	ENSG00000220205.9	ENST00000316509.11	2126	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	43.412987688018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTCTAAGATCTTTT	12	True	NA	-2	True	AATAAA	-18	NA	8162948	8159148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877
transcript_75029.known	chr17	-	557	4	FSM	ENSG00000220205.9	ENST00000481878.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	45.7456737480897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTATTTAGCCTGCATT	12	True	NA	NA	False	NA	NA	NA	8162948	8161318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8162877
transcript_75030.known	chr17	-	2263	5	FSM	ENSG00000179029.15	ENST00000437139.7	2263	5	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_2	3.93700393700591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTTATTGAGTACCT	-6	True	NA	-22	True	NA	NA	NA	8176380	8172456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8174273_8174519_8174617_8175756_8175858_8175958_8176027_8176199
transcript_75035.known	chr17	-	2358	3	FSM	ENSG00000179029.15	ENST00000532998.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	1	True	NA	NA	False	NA	NA	NA	8176373	8173741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8175858_8175958_8176027_8176199
transcript_75037.known	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	1	True	NA	-27	True	AATACA	-3	NA	8176373	8173236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8174273_8176199
transcript_75041.known	chr17	-	756	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.7032164438842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGACTTATATACAGT	-25	True	NA	-13	True	AATAAA	-17	NA	8176399	8174000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
transcript_75042.known	chr17	-	1836	1	FSM	ENSG00000196544.8	ENST00000389017.6	1836	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGGCTGAGTCTGTGT	-10	True	NA	-13	True	ATTAAA	-17	NA	8190180	8188344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8188300_8190200
transcript_75048.known	chr17	-	1243	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	0	0	0	multi-exon	TRUE	canonical	3	539	junction_8	87.8335606417046	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	3	True	NA	-7	True	AATAAA	-22	NA	8210575	8204733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_7505.known	chr1	-	5051	11	FSM	ENSG00000043514.17	ENST00000316891.10	5051	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	49.2301736742823	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAGACTCAACAATAC	-4	True	NA	NA	False	NA	NA	NA	39883504	39838109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_75053.nic	chr17	-	1243	9	NIC	ENSG00000178999.13	novel	1243	9	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	240.099426019722	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	NA	False	NA	-16	True	AATAAA	-13	NA	8210680	8204742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206935_8207317_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_75055.known	chr17	-	1167	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	245.48228249796	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-3	True	NA	-16	True	AATAAA	-13	NA	8210581	8204742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
transcript_7507.nic	chr1	-	1992	10	NIC	ENSG00000043514.17	novel	5051	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	60.1315430463563	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	NA	False	NA	-27	True	AATAAA	-17	NA	39883532	39841050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
transcript_75070.known	chr17	-	323	2	FSM	ENSG00000178999.13	ENST00000583124.1	323	2	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCTGCCAACGTGAATC	NA	False	NA	NA	False	NA	NA	NA	8210600	8209997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8210250_8210529
transcript_75076.known	chr17	+	5369	28	FSM	ENSG00000178921.14	ENST00000314666.11	5369	28	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	49.1575948944054	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTGCCTGGGGTCCAC	-6	True	NA	14	True	AATAAA	-18	NA	8249288	8270486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
transcript_75083.nic	chr17	+	5460	27	ISM	ENSG00000178921.14	ENST00000314666.11	5369	28	-40	46	-37	-46	intron_retention	FALSE	canonical	3	389	junction_1	47.1177550424114	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATAGCCCCTCCCCGCCTT	1089	False	NA	15	True	ACTAAA	-16	NA	8249248	8270440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532
transcript_7510.known	chr1	-	2034	10	FSM	ENSG00000043514.17	ENST00000372818.5	2034	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.7127490139676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-6	True	NA	-27	True	AATAAA	-17	NA	39883506	39841050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_75102.known	chr17	-	7039	23	FSM	ENSG00000178971.16	ENST00000651323.1	7039	23	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_4	16.5427695124032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTCTTGGTTATTAA	-7	True	NA	-1	True	AATAAA	-22	NA	8248056	8224814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229141_8229207_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237520_8238030_8238243_8238391_8238630_8242984_8243149_8248003
transcript_7511.known	chr1	-	1851	9	FSM	ENSG00000043514.17	ENST00000441669.6	1851	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	66.2382064974588	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	9	True	NA	-27	True	AATAAA	-17	NA	39883491	39841050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848092_39850118_39850262_39852730_39852877_39883317
transcript_7514.known	chr1	-	1156	8	FSM	ENSG00000043514.17	ENST00000495175.6	1156	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	49.0347648435812	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCACCATTTTCTTTTG	-11	True	NA	NA	False	NA	NA	NA	39883511	39841625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39883317
transcript_75144.known	chr17	-	1573	8	FSM	ENSG00000125434.11	ENST00000585311.5	1573	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.0797209676365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGCCCCCATGGGGAG	531	False	NA	NA	False	NA	NA	NA	8294836	8288859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8289398_8289573_8289644_8289853_8289985_8290602_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_75145.known	chr17	+	831	5	FSM	ENSG00000108961.14	ENST00000226105.11	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_4	81.0030863609529	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTCTGTGCCTTTGA	-3	True	NA	NA	False	AATAAA	-17	NA	8288669	8290087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502_8289589_8289812
transcript_75147.known	chr17	-	1940	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	2.54950975679639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-33	True	NA	2	True	TATAAA	-17	NA	8295400	8290060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_75148.known	chr17	+	1074	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	33.4896335536171	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	-19	True	NA	NA	False	AATAAA	-20	NA	8288653	8290090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
transcript_75149.known	chr17	+	749	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	218.037203757116	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	-2	True	NA	NA	False	AATAAA	-22	NA	8288670	8290092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
transcript_75151.known	chr17	+	1140	3	FSM	ENSG00000108961.14	ENST00000439238.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	30.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	5	True	NA	NA	False	AATAAA	-22	NA	8288677	8290092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257
transcript_75154.known	chr17	+	607	2	FSM	ENSG00000108961.14	ENST00000578849.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAGGAAAACCAGCAGG	26	True	NA	NA	False	NA	NA	NA	8288698	8289395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955
transcript_75155.known	chr17	+	4196	16	FSM	ENSG00000198844.12	ENST00000361926.8	4196	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.54209012865835	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCTCTCTGAGGAAGT	6	True	NA	25	True	AGTAAA	-17	NA	8310240	8322511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8310344_8311990_8312641_8312921_8313255_8313500_8313556_8314905_8314965_8315065_8315278_8315413_8315575_8315754_8315908_8316018_8316149_8318386_8318462_8318569_8318663_8318749_8318911_8319006_8319160_8319311_8319395_8319498_8319604_8320841
transcript_75156.nic	chr17	+	2898	10	ISM	ENSG00000198844.12	ENST00000647883.1	3485	13	2196	-22	431	0	3prime_fragment	FALSE	canonical	2	3	junction_8	1.91162783712058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCTCTCTGAGGAAGT	1743	False	NA	25	True	AGTAAA	-17	NA	8315299	8322511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_8315575_8315754_8315908_8316018_8316149_8318386_8318462_8318569_8318663_8318749_8318911_8319006_8319160_8319311_8319395_8319498_8319604_8320841
transcript_75157.nic	chr17	+	2746	9	ISM	ENSG00000198844.12	ENST00000647883.1	3485	13	2528	-22	763	0	3prime_fragment	FALSE	canonical	2	3	junction_7	1.89983551919633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCTCTCTGAGGAAGT	2075	False	NA	25	True	AGTAAA	-17	NA	8315631	8322511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_8315908_8316018_8316149_8318386_8318462_8318569_8318663_8318749_8318911_8319006_8319160_8319311_8319395_8319498_8319604_8320841
transcript_75159.known	chr17	+	4138	16	FSM	ENSG00000198844.12	ENST00000421050.2	4138	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.82055944017416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCTCTGAGGAAGTGTG	0	True	NA	28	True	AGTAAA	-20	NA	8310821	8322514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8310864_8311990_8312641_8312921_8313255_8313500_8313556_8314905_8314965_8315065_8315278_8315413_8315575_8315754_8315908_8316018_8316149_8318386_8318462_8318569_8318663_8318749_8318911_8319006_8319160_8319311_8319395_8319498_8319604_8320841
transcript_75168.known	chr17	-	563	4	FSM	ENSG00000161970.15	ENST00000584343.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	5960.23178147368	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAACTGGACAAAGACC	182	False	NA	-68	True	NA	NA	NA	8383009	8377678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382774
transcript_75169.known	chr17	-	763	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_3	5772.25370967778	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGATTAAAACTTGA	25	False	NA	62	True	AATAAA	-15	NA	8383166	8377548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
transcript_75172.known	chr17	-	3209	3	FSM	ENSG00000184619.8	ENST00000643221.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGACCATGCCACTGC	6533	False	NA	NA	False	NA	NA	NA	8376658	8368709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8370387_8371308_8372082_8375899
transcript_75174.known	chr17	-	12370	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-18	True	NA	NA	False	GATAAA	-1	NA	8376704	8358821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8370387_8375899
transcript_75178.known	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_3	2137.3447701919	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-2	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
transcript_75179.known	chr17	-	443	3	FSM	ENSG00000161970.15	ENST00000582485.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGATTAAAACTTGAAACAA	882	False	NA	67	True	AATAAA	-20	NA	8382309	8377543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8377679_8379795_8379937_8382142
transcript_75180.known	chr17	-	1002	3	FSM	ENSG00000161970.15	ENST00000578812.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_2	2617	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCTATATGTTCTAGT	-2	True	NA	NA	False	AATAAA	-38	NA	8383193	8379144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8379937_8382142_8382316_8383156
transcript_75182.known	chr17	-	7694	42	FSM	ENSG00000133026.14	ENST00000379980.8	7694	42	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	293.943680944028	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTTCTCACCTTCT	-2	True	NA	-13	True	AATAAA	-38	NA	8630761	8474206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576670_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_75185.known	chr17	-	7662	41	FSM	ENSG00000133026.14	ENST00000269243.8	7662	41	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_36	170.519307924352	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAATCTGTTTTCTCAC	-2	True	NA	-18	True	AATAAA	-33	NA	8630761	8474211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_7520.known	chr1	-	3256	3	FSM	ENSG00000116990.11	ENST00000397332.2	3256	3	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	26.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGGGCAGCTTAT	12	False	NA	-38	True	AATAAA	-17	NA	39902013	39895425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39897971_39900938_39901444_39901807
transcript_75201.nic	chr17	-	3177	23	ISM	ENSG00000133026.14	ENST00000465458.2	4236	26	-106	6864	-62	-6864	5prime_fragment	FALSE	canonical	0	0	junction_17	306.276063151373	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-1	True	NA	NA	False	AAGAAA	-34	NA	8630927	8512467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_75206.nic	chr17	-	3221	23	NIC	ENSG00000133026.14	novel	7809	43	NA	NA	-62	-6864	combination_of_known_junctions	FALSE	canonical	3	124	junction_22	282.386849277065	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-1	True	NA	NA	False	AAGAAA	-34	NA	8630927	8512467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
transcript_7521.known	chr1	-	3522	2	FSM	ENSG00000116990.11	ENST00000372816.3	3522	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTGGGGGCAGCTT	-26	True	NA	-40	True	AATAAA	-15	NA	39901917	39895427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39897971_39900938
transcript_75210.nic	chr17	-	2985	22	ISM	ENSG00000133026.14	ENST00000269243.8	7662	41	-4	38256	-4	-6864	5prime_fragment	FALSE	canonical	3	835	junction_17	102.795351809999	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-6	True	NA	NA	False	AAGAAA	-34	NA	8630765	8512467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_75211.nnic	chr17	-	3329	22	NIC	ENSG00000133026.14	novel	8100	43	NA	NA	0	-6864	combination_of_known_junctions	FALSE	canonical	3	38	junction_21	238.206193194448	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-37	True	NA	NA	False	AAGAAA	-34	NA	8631376	8512467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630920
transcript_7522.known	chr1	-	1944	2	FSM	ENSG00000116990.11	ENST00000372815.1	1944	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGGTGGAGTGGTAGAG	-28	True	NA	-23	True	AATAAA	-16	NA	39901919	39899611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39901444_39901807
transcript_75221.nic	chr17	-	2511	19	ISM	ENSG00000133026.14	ENST00000269243.8	7662	41	-28	44486	-9	2144	5prime_fragment	FALSE	canonical	3	835	junction_14	106.703639425592	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATTTAAAAATCACCGAT	550	False	NA	NA	False	AAGAAA	-1	NA	8630789	8518697	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_75229.known	chr17	+	2352	9	FSM	ENSG00000166579.16	ENST00000334527.12	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_8	33.8922926341668	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	-36	True	NA	23	True	AATAAA	-19	NA	8435883	8468163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_75235.known	chr17	-	2256	1	FSM	ENSG00000185156.6	ENST00000329805.6	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTATAGTCACTATATG	-4	True	NA	-2	True	AATACA	-19	NA	8799365	8797109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8797100_8799400
transcript_75238.known	chr17	-	4491	19	FSM	ENSG00000141506.15	ENST00000447110.6	4491	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	30.6560468729506	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	1	True	NA	-12	True	AATAAA	-18	NA	8965707	8878915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886606_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
transcript_7524.known	chr1	+	2129	14	FSM	ENSG00000168389.18	ENST00000372811.10	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	6.73505358149155	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTTTCTGTCTGTG	-6	True	NA	16	True	CATAAA	-13	NA	39955144	39969956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39955386_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_75244.known	chr17	-	680	6	FSM	ENSG00000141506.15	ENST00000578743.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	12.4354332453679	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGCCCAGCGCCAGA	9738	False	NA	NA	False	NA	NA	NA	8885086	8880640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8884919
transcript_75245.nic	chr17	-	2631	5	NIC	ENSG00000141506.15	novel	680	6	NA	NA	-112	-1	intron_retention	FALSE	canonical	3	70	junction_4	7.79021822544144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTAATGACCAGTAGT	9626	False	NA	-16	True	AATAAA	-14	NA	8885198	8878919	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8884919
transcript_75248.known	chr17	+	5986	7	FSM	ENSG00000065320.9	ENST00000173229.7	5986	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.06718737290547	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTCTCGCAGTCTTGAT	0	True	NA	19	True	AATAAA	-14	NA	9021509	9244000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_9021586_9022310_9023392_9162812_9163002_9179806_9179957_9182915_9182970_9221167_9221243_9239639
transcript_75252.known	chr17	-	830	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_7	70.7504957796143	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	17	True	NA	-1	True	AATAAA	-18	NA	9575820	9250470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
transcript_75253.known	chr17	-	731	7	FSM	ENSG00000170310.15	ENST00000574431.5	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	221.037515669475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAAAGCTCTGACCTC	0	True	NA	-17	True	AATAAA	-2	NA	9575837	9250486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9575791
transcript_75256.known	chr17	-	638	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	207.526962103723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTGCATTGCTTCA	2	True	NA	-2	True	AATAAA	-17	NA	9575835	9250471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
transcript_75258.known	chr17	-	454	5	FSM	ENSG00000170310.15	ENST00000575294.6	454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	251.962670846298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGCTCTCAATAAAT	26	True	NA	-37	True	NA	NA	NA	9575811	9250506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9568370_9568471_9575791
transcript_75260.known	chr17	+	3500	15	FSM	ENSG00000154914.17	ENST00000570475.5	3500	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	9.23281636117516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTGTAGGCAGCTCA	-11	True	NA	NA	False	NA	NA	NA	9645536	9729037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_9646137_9656402_9656535_9666647_9666752_9674890_9674984_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701686_9709955_9710115_9711967_9712133_9727953
transcript_75261.known	chr17	+	4185	15	FSM	ENSG00000154914.17	ENST00000285199.12	4185	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	7.02510076912257	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCATGGCTGTCTGAATT	3	True	NA	7	True	AATAAA	-16	NA	9645516	9729687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_9646137_9656402_9656535_9666647_9666752_9674890_9674984_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701701_9709955_9710115_9711967_9712133_9727953
transcript_75267.nnic	chr17	+	4102	14	NIC	ENSG00000154914.17	novel	4185	15	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	11.8945067127993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCATGGCTGTCTGAATT	3	True	NA	7	True	AATAAA	-16	NA	9645491	9729687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_9646137_9656402_9656535_9666647_9666752_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701686_9709955_9710115_9711967_9712133_9727953
transcript_75268.nnic	chr17	+	4117	14	NIC	ENSG00000154914.17	novel	4185	15	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	10.3689340290798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCATGGCTGTCTGAATT	3	True	NA	7	True	AATAAA	-16	NA	9645491	9729687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_9646137_9656402_9656535_9666647_9666752_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701701_9709955_9710115_9711967_9712133_9727953
transcript_75271.known	chr17	-	8269	14	FSM	ENSG00000007237.19	ENST00000432992.7	8269	14	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_13	5.74610750676403	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATCTCGTTTTTTTTTT	-2	True	NA	45	True	TATAAA	-20	NA	10198606	9910605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9917342_9918000_9918100_9919625_9919706_9925475_9925600_9926640_9926770_9934165_9934245_9940125_9940201_9943120_9943237_9946893_9946984_9959201_9959256_9969676_9969763_9981803_9981885_10019776_10019898_10198207
transcript_75278.nic	chr17	-	2769	22	ISM	ENSG00000125414.19	ENST00000397183.6	6078	40	-15	10548	-15	-10548	5prime_fragment	FALSE	canonical	2	12	junction_5	3.11531947310402	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAACTGGAAGAAAAG	132	False	NA	NA	False	ATTAAA	-29	NA	10549638	10531703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_10531889_10533284_10533422_10533508_10533633_10535072_10535191_10535277_10535366_10536529_10536607_10537232_10537543_10537664_10537836_10539204_10539355_10539443_10539563_10539927_10540067_10540593_10540698_10542874_10542974_10543097_10543162_10543710_10543804_10543901_10544017_10544099_10544128_10545345_10545503_10547474_10547619_10547716_10547941_10549374_10549418_10549558
transcript_75281.known	chr17	-	9577	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	42.1881499949927	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTTTTTTTTGTA	-6	True	NA	NA	False	AATAAA	-17	NA	10697533	10672473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
transcript_75284.known	chr17	-	2813	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	4.3081318457076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATCTTTTTTTTTTTT	-18	True	NA	NA	False	ATTAAA	-17	NA	10730023	10713294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
transcript_75288.known	chr17	-	1402	5	FSM	ENSG00000187824.9	ENST00000455996.6	1402	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	9.28372231381357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGT	-18	True	NA	NA	False	NA	NA	NA	10730023	10714675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729779
transcript_75291.known	chr17	+	1534	4	FSM	ENSG00000170222.12	ENST00000379774.5	1534	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.32049379893857	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTATACTTGGATTTTT	-24	True	NA	NA	False	NA	NA	NA	10697593	10711558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10697668_10704909_10705528_10706437_10706555_10710833
transcript_75292.known	chr17	+	1277	4	FSM	ENSG00000170222.12	ENST00000468843.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	6.64997911442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGCTTGCATAACAAAAT	-4	True	NA	12	True	AATAAA	-25	NA	10697613	10711233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10697668_10704909_10705616_10706437_10706555_10710833
transcript_75295.known	chr17	+	609	4	FSM	ENSG00000263400.8	ENST00000583012.1	609	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.32049379893857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGATGAAGTGCAACCTG	22	False	NA	NA	False	NA	NA	NA	10729809	10767052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10729877_10736604_10736639_10754228_10754363_10766678
transcript_75296.known	chr17	+	562	3	FSM	ENSG00000263400.8	ENST00000581366.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGACACGAGCAACTAAT	-11	True	NA	NA	False	NA	NA	NA	10729776	10767006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10729877_10754228_10754363_10766678
transcript_75298.known	chr17	+	1138	3	FSM	ENSG00000170222.12	ENST00000609540.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGCTTGCATAACAA	7282	False	NA	9	True	AATAAA	-22	NA	10704899	10711230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10705528_10706437_10706551_10710833
transcript_75299.known	chr17	+	1986	4	FSM	ENSG00000007174.18	ENST00000579828.5	1986	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACTTTGCCCAGAACT	-3	True	NA	NA	False	ATTAAA	-17	NA	11598469	11612833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_11598916_11608128_11608326_11610395_11610555_11611649
transcript_75307.nic	chr17	-	2467	8	NIC	ENSG00000154957.14	novel	2295	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	33.0064928677461	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	NA	False	NA	-1	True	AATAAA	-26	NA	11997494	11977438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11993501_11993655_11997430
transcript_75311.known	chr17	-	2261	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	27.4043792120894	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTATCTTATTTGTTT	0	True	NA	-14	True	AATAAA	-13	NA	11997457	11977451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_75312.nnic	chr17	-	2881	7	NIC	ENSG00000154957.14	novel	2767	9	NA	NA	17	0	intron_retention	FALSE	canonical	2	9	junction_6	28.4780617317963	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	17	True	NA	-1	True	AATAAA	-26	NA	11997440	11977438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11996809
transcript_75313.known	chr17	-	2295	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	25.0399680510978	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-18	True	NA	-1	True	AATAAA	-26	NA	11997475	11977438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_75315.nnic	chr17	+	672	2	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	560	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGTTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	11972072	11976909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr17_+_11972336_11976500
transcript_75318.known	chr17	+	3778	11	FSM	ENSG00000065559.15	ENST00000353533.10	3778	11	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	32.8799330899562	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCTTTTGGAAGTGT	29	True	NA	37	True	ATTAAA	-29	NA	12020876	12143828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12054888_12054992_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_7532.known	chr1	+	1914	12	FSM	ENSG00000168389.18	ENST00000420632.6	1914	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.0606518355241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCTCAGCCACT	NA	False	NA	28	True	CATAAA	-25	NA	39955111	39969968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39955386_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_75324.known	chr17	+	1064	10	FSM	ENSG00000065559.15	ENST00000602375.5	1064	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	82.1044201152967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGGGCTGAGAGGA	22	True	NA	NA	False	NA	NA	NA	12020869	12141282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12054888_12054992_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_75326.known	chr17	+	1136	10	FSM	ENSG00000065559.15	ENST00000602811.5	1136	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	77.0699537937955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGGGCTGAGAGGA	22	True	NA	NA	False	NA	NA	NA	12020869	12141282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_75329.known	chr17	+	961	9	FSM	ENSG00000065559.15	ENST00000602305.5	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	83.6322866780528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGGGCTGAGAGGA	22	True	NA	NA	False	NA	NA	NA	12020869	12141282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_75335.known	chr17	+	8565	14	FSM	ENSG00000141052.18	ENST00000425538.6	8565	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	4.91224770495065	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAACTTTTTTTTTTTC	-1	True	NA	NA	False	AATAAA	-21	NA	12665889	12768949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12666244_12705127_12705194_12715518_12715575_12717345_12717422_12722846_12723009_12736160_12736337_12739202_12739329_12744182_12744437_12745918_12746073_12752413_12753347_12756413_12756558_12758084_12758214_12760649_12760708_12763072
transcript_75340.known	chr17	+	4211	20	FSM	ENSG00000006740.18	ENST00000340825.7	4211	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_19	13.6955418671921	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCATCTGTTCTTGCT	37	True	NA	17	True	ATTAAA	-20	NA	12789538	12991643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716_12958898_12974088_12974311_12980057_12980234_12984530_12984909_12990031
transcript_75349.nic	chr17	+	2047	16	ISM	ENSG00000006740.18	ENST00000262444.13	3001	22	-297	31539	-35	0	5prime_fragment	TRUE	canonical	3	83	junction_7	10.522779522963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGATGAGTTTCTTT	-39	True	NA	10	True	ATTAAA	-13	NA	12789462	12959045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716
transcript_75356.nic	chr17	-	2819	24	NIC	ENSG00000006744.19	novel	3767	24	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_23	173.38921109896	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	275	False	NA	-9	True	AATAAA	-15	NA	13017722	12992390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017566
transcript_75357.known	chr17	-	3767	24	FSM	ENSG00000006744.19	ENST00000338034.9	3767	24	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_14	63.1821563190641	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGACAACGATTTGTAC	-30	True	NA	-6	True	AATAAA	-19	NA	13018027	12991611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
transcript_75366.known	chr17	-	2671	23	FSM	ENSG00000006744.19	ENST00000426905.7	2671	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	180.223948152301	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAGTTTTTAAAGAAGT	-2	True	NA	NA	False	NA	NA	NA	13017999	12992559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
transcript_75402.known	chr17	-	4186	2	FSM	ENSG00000153976.3	ENST00000284110.2	4186	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTTTTGAACATAGATA	13	True	NA	NA	False	AATAAA	-24	NA	13601929	13494031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_13496819_13600530
transcript_75408.known	chr17	-	2291	3	FSM	ENSG00000236088.11	ENST00000660804.1	2291	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTGAAATATACTTTAT	-22	True	NA	NA	False	NA	NA	NA	14069483	14028901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_14030572_14034007_14034417_14069271
transcript_75409.known	chr17	-	5962	2	FSM	ENSG00000236088.11	ENST00000661551.1	5962	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTAGGGCATAATAATTT	-31	True	NA	NA	False	AATATA	-10	NA	14069492	14028675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_14034417_14069271
transcript_75411.known	chr17	-	2077	3	FSM	ENSG00000236088.11	ENST00000656963.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAACACTTGGTAGAAA	-14	True	NA	NA	False	AAAAAG	-24	NA	14069475	14029629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_14031094_14034007_14034417_14069271
transcript_75414.known	chr17	+	2898	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	45.6240677225908	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	-15	True	NA	14	True	AATAAA	-15	NA	14069503	14208677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
transcript_75416.known	chr17	+	1509	6	FSM	ENSG00000006695.12	ENST00000581931.5	1509	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	100.276417965542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATACACAGCTTCCTCT	85	False	NA	NA	False	NA	NA	NA	14069603	14207513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14159876_14159948_14191988_14192222_14206809
transcript_75418.known	chr17	+	875	3	FSM	ENSG00000006695.12	ENST00000429152.6	875	3	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCTTTAGTGTTT	-23	True	NA	NA	False	ATTAAA	-22	NA	14069495	14077322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14069649_14074322_14074457_14076734
transcript_75419.known	chr17	+	2808	3	FSM	ENSG00000125430.9	ENST00000466596.5	2808	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTCACTTTTGTGA	-3	True	NA	NA	False	AATAAA	-19	NA	14301082	14349144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14302073_14345027_14345703_14348001
transcript_75420.known	chr17	+	5369	2	FSM	ENSG00000125430.9	ENST00000360954.3	5369	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGGTACCTTTATGTT	-5	True	NA	4	True	AATAAA	-15	NA	14301080	14349404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14302073_14345027
transcript_75423.known	chr17	-	459	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTTTGTT	41	False	NA	NA	False	AAGAAA	-4	NA	14705534	14705075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_14705100_14705500
transcript_75424.known	chr17	-	2423	5	FSM	ENSG00000109099.16	ENST00000674673.1	2423	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	3.8405728739343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGAGTTTTTGTGGGA	9102	False	NA	6	True	AATAAA	-22	NA	15263190	15229772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260762_15262428
transcript_75425.known	chr17	-	2047	5	FSM	ENSG00000109099.16	ENST00000675808.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.16441400296898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCACTGGTCTCTCTTG	9687	False	NA	-7	True	AATAAA	-9	NA	15262605	15229785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260984_15262428
transcript_75435.nnic	chr17	-	3029	8	NIC	ENSG00000259024.6	novel	2833	7	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	108.954025129119	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	0	True	NA	-18	True	AATAAA	-15	NA	15563622	15436020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15438201_15440207_15440286_15503097_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_75446.known	chr17	-	2833	7	FSM	ENSG00000259024.6	ENST00000522212.6	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	103.660369583666	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	61	False	NA	-18	True	AATAAA	-15	NA	15563561	15436020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_75447.known	chr17	-	520	7	FSM	ENSG00000259024.6	ENST00000518506.4	520	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	125.786415094088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCACCTATACCTCT	174	False	NA	NA	False	AAAACA	-15	NA	15563448	15438140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553764_15553830_15555281_15555365_15563436
transcript_75448.known	chr17	-	556	6	FSM	ENSG00000259024.6	ENST00000481756.7	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	107.181341659824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCGAGGAAAGACCCTG	16	True	NA	NA	False	NA	NA	NA	15563472	15438063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15555281_15555365_15563436
transcript_75450.nnic	chr17	-	2670	5	NIC	ENSG00000259024.6	novel	556	6	NA	NA	-61	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	126.825421347615	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATCTCTTTTGTTCT	0	True	NA	-19	True	AATAAA	-14	NA	15563622	15436021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15438201_15545784_15545917_15547058_15547149_15555281_15555365_15563436
transcript_75451.known	chr17	-	1527	6	FSM	ENSG00000175106.17	ENST00000225576.7	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	94.3152161636711	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGCCTTCGTAATGAAA	78	False	NA	NA	False	ATTAAA	-19	NA	15563544	15502263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_75454.known	chr17	-	3358	12	FSM	ENSG00000221926.13	ENST00000649191.2	3358	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	17.6227688934252	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-6	True	NA	-13	True	AATAAA	-16	NA	15684311	15627965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15651090_15651947_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_75456.nic	chr17	-	2598	12	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	6	junction_5	16.9086021434736	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTATGTGCCAGATAC	NA	False	NA	-14	True	AATAAA	-15	NA	15684333	15627966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_75459.nic	chr17	-	2523	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	26	junction_5	9.79846926820715	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTATGTGCCAGATAC	NA	False	NA	-14	True	AATAAA	-15	NA	15684333	15627966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_75463.nic	chr17	-	2346	10	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	4	junction_6	18.6964048831735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTATGTGCCAGATAC	NA	False	NA	-14	True	AATAAA	-15	NA	15684333	15627966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_75465.nic	chr17	-	2376	10	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	2	junction_6	16.1038297722415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTATGTGCCAGATAC	NA	False	NA	-14	True	AATAAA	-15	NA	15684333	15627966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_75468.nic	chr17	-	2271	9	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	15	junction_5	12.0726964676496	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTATGTGCCAGATAC	NA	False	NA	-14	True	AATAAA	-15	NA	15684333	15627966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_75480.known	chr17	+	5443	6	FSM	ENSG00000187607.16	ENST00000395894.6	5443	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	50.5276162113354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	-16	True	NA	10	True	AATAAA	-27	NA	15699738	15720787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_75483.known	chr17	+	5541	6	FSM	ENSG00000187607.16	ENST00000421016.5	5541	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	65.0765702845502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTTTGTAAATTGCT	NA	False	NA	5	True	AATAAA	-22	NA	15699576	15720782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
transcript_75487.known	chr17	+	607	6	FSM	ENSG00000187607.16	ENST00000585194.5	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	66.9429607949932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCTTTCAGACATGG	-10	True	NA	NA	False	NA	NA	NA	15699744	15716044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_75489.known	chr17	+	5284	6	FSM	ENSG00000187607.16	ENST00000583566.6	5284	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	76.7765589226295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	-3	True	NA	10	True	AATAAA	-27	NA	15699751	15720787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
transcript_75492.known	chr17	+	541	6	FSM	ENSG00000187607.16	ENST00000580393.5	541	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	86.3050404090051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGCAGAATCATGCAAA	-11	True	NA	NA	False	NA	NA	NA	15699743	15716109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700207_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
transcript_75493.nic	chr17	+	850	5	ISM	ENSG00000187607.16	ENST00000395894.6	5443	6	-18	12363	2	0	5prime_fragment	FALSE	canonical	3	79	junction_1	54.2148503640838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	2	False	NA	10	True	AATAAA	-22	NA	15699720	15708424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154
transcript_755.known	chr1	-	1028	7	FSM	ENSG00000160087.21	ENST00000473215.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	203.981004017531	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGGTTTGCAGCCTTT	-5	True	NA	NA	False	NA	NA	NA	1273849	1255267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267732_1267993_1273665
transcript_75501.known	chr17	+	1522	2	FSM	ENSG00000170425.4	ENST00000304222.3	1522	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGCCAGGAAGGTG	10	True	NA	NA	False	AATAAA	-23	NA	15945129	15975746	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15945584_15974678
transcript_75502.known	chr17	-	1264	8	FSM	ENSG00000214941.8	ENST00000490395.5	1264	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	238.555431456823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	11	True	NA	-4	True	GATAAA	-32	NA	15999650	15976559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_75507.nic	chr17	-	826	7	NIC	ENSG00000214941.8	novel	987	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	211.725451154713	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-12	True	NA	-4	True	AATAAA	-25	NA	15999717	15977729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999518
transcript_75509.known	chr17	-	969	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	251.610333651064	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	882	False	NA	-4	True	GATAAA	-32	NA	15999588	15976559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_75511.known	chr17	-	918	6	FSM	ENSG00000214941.8	ENST00000486706.6	918	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	240.875569537469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	-8	True	NA	-7	True	AATAAA	-22	NA	15999669	15977732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
transcript_75512.known	chr17	-	671	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	173.606912304781	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	22	True	NA	-1	True	AATAAA	-28	NA	15999639	15977726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_75513.known	chr17	-	682	5	FSM	ENSG00000214941.8	ENST00000460252.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	225.936246538708	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGGGCTGTGGAGG	-20	True	NA	NA	False	NA	NA	NA	15999681	15977890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_75514.known	chr17	-	1869	5	FSM	ENSG00000214941.8	ENST00000399280.6	1869	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	237.611026680161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	11	True	NA	-4	True	GATAAA	-32	NA	15999694	15976559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_75518.known	chr17	-	1969	17	FSM	ENSG00000141027.22	ENST00000436828.5	1969	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	114.76327537588	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	7	True	NA	-50	True	GATAAA	-22	NA	16215530	16126131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_75522.known	chr17	-	1877	16	FSM	ENSG00000141027.22	ENST00000582357.5	1877	16	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	80.1444251890853	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATGAAAAAGAAGAC	8	True	NA	-25	True	AAAAAG	-25	NA	16215529	16126106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75523.nic	chr17	-	1915	16	NIC	ENSG00000141027.22	novel	1969	17	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_7	78.4871964080767	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	NA	False	NA	-50	True	GATAAA	-22	NA	16215595	16126131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75530.nic	chr17	-	1932	16	ISM	ENSG00000141027.22	ENST00000436828.5	1969	17	-38	11179	-20	-11179	5prime_fragment	FALSE	canonical	0	0	junction_14	114.762866623118	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTCTTACTTGTAT	NA	False	NA	NA	False	NA	NA	NA	16215568	16137310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_75533.known	chr17	-	1883	15	FSM	ENSG00000141027.22	ENST00000411510.5	1883	15	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	68.6424111773829	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAATAATTAGTTA	0	True	NA	0	True	AAAAAG	-20	NA	16215537	16126081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75534.nic	chr17	-	1888	15	ISM	ENSG00000141027.22	ENST00000268712.8	10705	46	-61	96975	-47	0	5prime_fragment	FALSE	canonical	3	146	junction_1	66.3883134539906	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	NA	False	NA	-50	True	GATAAA	-22	NA	16215595	16126131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75539.nic	chr17	-	1840	15	ISM	ENSG00000141027.22	ENST00000582357.5	1877	16	-66	11204	-47	-11179	5prime_fragment	FALSE	canonical	3	137	junction_6	70.5539307399463	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTCTTACTTGTAT	NA	False	NA	NA	False	NA	NA	NA	16215595	16137310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75549.nic	chr17	-	1813	14	ISM	ENSG00000141027.22	ENST00000411510.5	1883	15	-58	11229	-47	-11179	5prime_fragment	FALSE	canonical	3	162	junction_6	51.7895148283303	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTCTTACTTGTAT	NA	False	NA	NA	False	NA	NA	NA	16215595	16137310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75550.nic	chr17	-	1755	14	ISM	ENSG00000141027.22	ENST00000411510.5	1883	15	-58	11287	-47	-11237	5prime_fragment	FALSE	canonical	3	162	junction_6	51.7895148283303	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATTATAAAGCCCTCG	NA	False	NA	NA	False	AAGAAA	-3	NA	16215595	16137368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75559.nic	chr17	-	1330	11	ISM	ENSG00000141027.22	ENST00000436828.5	1969	17	-38	23321	-20	15418	5prime_fragment	FALSE	canonical	0	0	junction_9	127.188089064975	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGGTCCTATCCTTGT	NA	False	NA	NA	False	AAGAAA	-18	NA	16215568	16149452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_75563.nic	chr17	-	1238	10	ISM	ENSG00000141027.22	ENST00000582357.5	1877	16	-66	23346	-47	15418	5prime_fragment	FALSE	canonical	3	137	junction_1	81.6877523799553	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGGTCCTATCCTTGT	NA	False	NA	NA	False	AAGAAA	-18	NA	16215595	16149452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75566.nic	chr17	-	1211	9	ISM	ENSG00000141027.22	ENST00000411510.5	1883	15	-58	23371	-47	15418	5prime_fragment	FALSE	canonical	3	162	junction_1	61.0131901722898	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGGTCCTATCCTTGT	NA	False	NA	NA	False	AAGAAA	-18	NA	16215595	16149452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75570.known	chr17	-	983	5	FSM	ENSG00000141027.22	ENST00000585296.1	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	37.2759976392316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTCGGACTTGCTGTT	-11	True	NA	NA	False	CATAAA	-15	NA	16215548	16164870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_75572.known	chr17	-	1848	15	FSM	ENSG00000141027.22	ENST00000460276.5	1848	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	102.103014207241	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	7	True	NA	-50	True	GATAAA	-22	NA	16215530	16126131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16172021_16186553_16186688_16194461_16194640_16215361
transcript_75578.known	chr17	+	3050	10	FSM	ENSG00000011295.16	ENST00000261647.10	3050	10	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	69.9048736357108	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTCACTGGAGTTTTC	1	True	NA	10	True	ATTAAA	-15	NA	15999823	16029404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16000033_16000117_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_75579.known	chr17	+	2591	10	FSM	ENSG00000011295.16	ENST00000475723.5	2591	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	181.932900397134	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	31	False	NA	33	True	AATAAA	-19	NA	15999801	16028786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16000033_16000117_16000383_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_7558.known	chr1	+	2592	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	549.491349391012	1931	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	1	True	NA	19	True	AATAAA	-10	NA	40040752	40072641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_75591.known	chr17	+	1289	7	FSM	ENSG00000108474.17	ENST00000225609.10	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.4419672692682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	-6	True	NA	NA	False	NA	NA	NA	16217209	16326411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
transcript_75599.nic	chr17	+	2198	6	NIC	ENSG00000108474.17	novel	1289	7	NA	NA	-5	-159	intron_retention	FALSE	canonical	3	66	junction_2	18.5105375394665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCACAGATGTGACTTT	-12	True	NA	13	True	CATAAA	-24	NA	16217203	16326252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16317909_16325799
transcript_75602.known	chr17	+	1257	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	36.8423669163641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	-6	True	NA	NA	False	NA	NA	NA	16217209	16326411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
transcript_75606.known	chr17	+	888	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCCATTTGTTTG	30	False	NA	14	True	AATAAA	-25	NA	16217245	16218219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16217462_16217547
transcript_75608.known	chr17	-	1132	5	FSM	ENSG00000166582.11	ENST00000299736.5	1132	5	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_3	237.799679352181	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-19	True	NA	-20	True	AATAAA	-17	NA	16353469	16342536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
transcript_75610.known	chr17	-	1770	5	FSM	ENSG00000166582.11	ENST00000476243.5	1770	5	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_3	778.611705216406	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	-6	True	NA	-17	True	AATAAA	-20	NA	16353456	16342533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16349334_16349930_16350030_16353026
transcript_75615.nic	chr17	-	1866	3	FSM	ENSG00000166582.11	ENST00000631687.2	1593	3	-278	5	-33	-5	multi-exon	FALSE	canonical	3	558	junction_1	907	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGTAACCACTGTTAA	NA	False	NA	-22	True	AATAAA	-20	NA	16353502	16348042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16349334_16349930_16350030_16353026
transcript_75619.known	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6628	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	-3	True	NA	24	True	AATAAA	-18	NA	16381090	16382740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16381185_16381901
transcript_75620.known	chr17	+	477	2	FSM	ENSG00000170315.14	ENST00000578649.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTTTGTCATGAAA	1	True	NA	29	True	AATAAA	-23	NA	16381094	16382745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16381185_16382358
transcript_75621.known	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	196	False	NA	24	True	AATAAA	-18	NA	16381289	16382740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16381463_16381901
transcript_75622.known	chr17	+	2779	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1.11574995370095	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	7	True	NA	25	True	AATATA	-17	NA	16415570	16437003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
transcript_75624.known	chr17	+	1149	6	FSM	ENSG00000175061.19	ENST00000484836.2	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1407.83612682727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440110_16440254_16441073_16441131_16441367
transcript_75625.known	chr17	+	1129	6	FSM	ENSG00000175061.19	ENST00000660020.1	1129	6	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	1217.14459288944	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8797	False	NA	-16	True	AATAAA	-30	NA	16438982	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073_16441131_16441367
transcript_75627.known	chr17	+	1023	6	FSM	ENSG00000175061.19	ENST00000671170.1	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	1314.41202063889	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441356
transcript_75628.known	chr17	+	604	6	FSM	ENSG00000175061.19	ENST00000584926.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1482.06294063376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGAGTGTGGTGGCA	0	True	NA	NA	False	NA	NA	NA	16439036	16441615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440110_16440254_16441073_16441131_16441367
transcript_75629.known	chr17	+	993	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	0	4	0	0	multi-exon	FALSE	canonical	3	198	junction_2	1310.53766065688	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	-2	True	NA	-16	True	AATAAA	-30	NA	16438986	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_75630.known	chr17	+	1043	6	FSM	ENSG00000175061.19	ENST00000487066.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1475.02257609841	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	8789	False	NA	-26	True	AATAAA	-20	NA	16438974	16442018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439030_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
transcript_75633.known	chr17	+	879	5	FSM	ENSG00000175061.19	ENST00000582911.6	885	5	0	6	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	1371.05898851946	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATTCTTGAAAATGTG	31	False	NA	-32	True	AATAAA	-14	NA	16439019	16442012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439394_16440184_16440254_16441073_16441131_16441367
transcript_75634.known	chr17	+	1035	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_4	814.961770575774	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	21	False	NA	-26	True	AATAAA	-20	NA	16439009	16442018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
transcript_75636.known	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	209	junction_2	877.879405157679	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	0	True	NA	-21	True	AATAAA	-25	NA	16439036	16442023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
transcript_75638.known	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	880.255751188256	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
transcript_75640.known	chr17	+	973	5	FSM	ENSG00000175061.19	ENST00000477249.7	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1369.39137940912	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440110_16440254_16441073_16441131_16441367
transcript_75641.known	chr17	+	1217	5	FSM	ENSG00000175061.19	ENST00000475947.7	1217	5	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	376.111270105005	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCAGATATTCGCTCT	8581	False	NA	32	True	AGTAAA	-26	NA	16438766	16442076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_75642.known	chr17	+	3062	5	FSM	ENSG00000175061.19	ENST00000664939.1	3062	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	1340.05585238079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAATATTGAGAAAATT	13	False	NA	-11	True	AATATA	-1	NA	16439001	16473090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16470301
transcript_75643.known	chr17	+	1178	5	FSM	ENSG00000175061.19	ENST00000480811.6	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_2	1051.04552113598	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439704_16440184_16440254_16441073_16441131_16441367
transcript_75644.known	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1371.4202492307	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	12	False	NA	-16	True	AATAAA	-30	NA	16439000	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_75646.known	chr17	+	1201	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	8	0	7	0	multi-exon	FALSE	canonical	3	198	junction_1	1446.31037039081	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8	False	NA	-16	True	AATAAA	-30	NA	16439044	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_75647.known	chr17	+	1159	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	397.256424323971	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	15	False	NA	-26	True	AATAAA	-20	NA	16439003	16442018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
transcript_75650.known	chr17	+	897	4	FSM	ENSG00000175061.19	ENST00000580180.6	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	1170.31970940518	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8796	False	NA	-16	True	AATAAA	-30	NA	16438981	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441367
transcript_75651.known	chr17	+	1685	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	427.564679967319	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	22	False	NA	-26	True	AATAAA	-20	NA	16439010	16442018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
transcript_75653.known	chr17	+	793	4	FSM	ENSG00000175061.19	ENST00000658116.2	801	4	1	7	0	-5	multi-exon	FALSE	canonical	3	20	junction_1	1570.24867103554	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAATTCTTGAAAATGT	1	True	NA	-33	True	AATAAA	-13	NA	16439037	16442011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16440184_16440254_16441073_16441131_16441367
transcript_75655.known	chr17	-	3249	4	FSM	ENSG00000181350.12	ENST00000470794.2	3249	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	7.76029781788188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAAAACTCAAGAATG	0	True	NA	-102	True	AATACA	-31	NA	16492193	16441576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16444132_16447844_16447961_16462257_16462387_16491744
transcript_75658.known	chr17	-	2656	3	FSM	ENSG00000181350.12	ENST00000409083.7	2656	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGACCATCCTTTATT	40	False	NA	-11	True	AATACA	-18	NA	16492153	16442013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16444132_16462257_16462387_16491744
transcript_75662.known	chr17	+	1930	3	FSM	ENSG00000175061.19	ENST00000659884.1	1930	3	0	0	0	0	multi-exon	FALSE	canonical	3	3350	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGGTGTCAATTCT	27	False	NA	-42	True	AATAAA	-4	NA	16439015	16442002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16440254_16441073_16441131_16441367
transcript_75663.known	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	70.7153920067383	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
transcript_75664.known	chr17	+	1057	3	FSM	ENSG00000175061.19	ENST00000470491.7	1108	3	22	29	3	-3	multi-exon	FALSE	canonical	3	428	junction_2	1386.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCTTGGGTGTCAAT	22	False	NA	42	True	AATAAA	-1	NA	16439058	16441999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439415_16440184_16440254_16441367
transcript_75668.known	chr17	-	7639	6	FSM	ENSG00000141040.15	ENST00000395825.4	7639	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	11.3947356265953	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATATGTACAAATGCGTG	-9	True	NA	NA	False	ATTAAA	-23	NA	16569204	16546953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568951
transcript_75669.nnic	chr17	-	882	5	NIC	ENSG00000141040.15	novel	7639	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	33.1888535505522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCAACCTTCAATCA	-9	True	NA	-16	True	AATAAA	-19	NA	16569204	16553109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16568951
transcript_75670.known	chr17	-	4241	6	FSM	ENSG00000197566.10	ENST00000311331.12	4241	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCGTTTTATTTATTG	-13	True	NA	NA	False	ATTAAA	-16	NA	16653850	16620733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16624510_16633861_16633958_16634629_16634757_16647328_16647395_16649657_16649747_16653763
transcript_75672.known	chr17	+	3846	24	FSM	ENSG00000133030.22	ENST00000341712.8	3846	24	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_8	27.5597992206272	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGGCCCCTCTCCTTCC	99	False	NA	79	True	ATTAAA	-13	NA	17042848	17185560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
transcript_75674.known	chr17	-	3667	14	FSM	ENSG00000154803.13	ENST00000285071.9	3667	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	10.9965029406206	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACTACATGGTTTTAT	-9	True	NA	-10	True	AATAAA	-17	NA	17237168	17212211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17213857_17214984_17215091_17215184_17215317_17216379_17216504_17217068_17217183_17219018_17219210_17221536_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_75678.known	chr17	-	1692	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	8.34461820943442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTCCCAAGTTTTCCAT	20	True	NA	-7	True	AATAAA	-14	NA	17237139	17221170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_75688.known	chr17	-	2523	5	FSM	ENSG00000154803.13	ENST00000389171.4	2523	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	8.38152730712011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAAGAAAGAAAG	-29	True	NA	NA	False	NA	NA	NA	17237188	17224552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_75689.nic	chr17	-	1745	13	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	278.08195984078	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-4	True	NA	-31	True	ATTAAA	-19	NA	17281303	17246834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261599_17261693_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_75693.known	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	648	junction_9	78.6130811565456	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-3	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_75694.known	chr17	-	1625	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	286.034413926739	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTGAACATTAATG	108	False	NA	32	True	ATTAAA	-17	NA	17281191	17246836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_75700.nic	chr17	-	1478	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	229.354223854718	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-4	True	NA	-31	True	ATTAAA	-19	NA	17281303	17246834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_75708.known	chr17	+	1408	6	FSM	ENSG00000205309.14	ENST00000483704.5	1408	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.9458178572611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	260	False	NA	18	True	AATAAA	-24	NA	17303677	17347663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17303818_17304363_17304478_17306542_17306644_17323184_17323246_17344793_17344927_17346804
transcript_75709.known	chr17	+	1581	5	FSM	ENSG00000205309.14	ENST00000389022.9	1581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.2226242670917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	16	True	NA	18	True	AATAAA	-24	NA	17303372	17347663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344909_17346804
transcript_75711.known	chr17	-	636	1	FSM	ENSG00000215030.5	ENST00000392730.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCTGGGGACTTGGA	48	False	NA	NA	False	AAAAAG	-44	NA	17384012	17383376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17383400_17384000
transcript_75712.known	chr17	+	2209	2	FSM	ENSG00000141026.6	ENST00000268711.4	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCTTTTTGTACTGA	-9	True	NA	18	True	ATTAAA	-27	NA	17476999	17493221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17477266_17491278
transcript_75714.known	chr17	-	1748	2	FSM	ENSG00000108551.5	ENST00000225688.4	1748	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTTTTTTTTTTTTTTTT	-1	True	NA	0	True	AATAAA	-19	NA	17496395	17494436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17495685_17495895
transcript_75727.known	chr17	-	1021	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_6	38.4812364088728	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-18	True	NA	-10	True	AATAAA	-17	NA	17591708	17505562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_75728.nic	chr17	-	965	7	NIC	ENSG00000133027.18	novel	960	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	182.930238676448	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-28	True	NA	-10	True	AATAAA	-17	NA	17591718	17505562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591596
transcript_75732.nic	chr17	-	939	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	45	junction_4	186.861017871572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	391	False	NA	-10	True	AATAAA	-17	NA	17591742	17505562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17576919_17577028_17591530
transcript_75738.known	chr17	+	7677	6	FSM	ENSG00000108557.20	ENST00000353383.6	7677	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.40370243444252	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCCCGTGGATTCCG	-12	True	NA	11	True	AATAAA	-24	NA	17681457	17811453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17681794_17724027_17724160_17792932_17798514_17803755_17803850_17809389_17809440_17809969
transcript_75742.nic	chr17	-	4228	20	NIC	ENSG00000072310.18	novel	4253	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	76.7814468587135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTCTTCAGCTGA	3137	False	NA	-2	True	ATTAAA	-22	NA	17837008	17812072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817547_17817592_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17836726
transcript_75743.known	chr17	-	4253	20	FSM	ENSG00000072310.18	ENST00000355815.8	4253	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_19	78.2343946011916	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTCTTCAGCTGA	-4	True	NA	-2	True	ATTAAA	-22	NA	17836987	17812072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17823517_17823608_17836726
transcript_75748.known	chr17	-	4901	19	FSM	ENSG00000072310.18	ENST00000261646.11	4901	19	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_14	26.7162155411186	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTGTGAAGCAATAT	-3	True	NA	74	True	AATAAA	-31	NA	17836986	17811333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17836726
transcript_75777.known	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.20792175244519	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-5	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_75778.known	chr17	-	5595	14	FSM	ENSG00000175662.18	ENST00000581396.5	5595	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	6.72978014710751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-15	True	NA	NA	False	AATAAA	-17	NA	17972410	17843510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17898595_17898675_17907446_17907532_17972261
transcript_75779.known	chr17	-	1766	14	FSM	ENSG00000175662.18	ENST00000395739.8	1766	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.76398398060942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTGCTTCCTGAGCAG	-9	True	NA	NA	False	NA	NA	NA	17972404	17847348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_75783.known	chr17	-	1220	7	FSM	ENSG00000175662.18	ENST00000537091.2	1220	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	7.15114598430831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAATCTCTAGTA	-2	True	NA	NA	False	ATTAAA	-1	NA	17972397	17868964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17898595_17898675_17907446_17907532_17972261
transcript_75785.known	chr17	-	1553	8	FSM	ENSG00000171953.16	ENST00000474627.8	1553	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.4553368303793	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTAAGCTGGTTGT	12	True	NA	-1	True	NA	NA	NA	18039168	18018020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
transcript_75790.known	chr17	+	4122	6	FSM	ENSG00000141034.10	ENST00000268719.9	4122	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	13.7462722219517	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCCTATTTGTAAACC	-13	True	NA	22	True	AATAAA	-17	NA	18039407	18068405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18039903_18045146_18045207_18054126_18054235_18058867_18058970_18061844_18061976_18065179
transcript_75801.known	chr17	+	1900	13	FSM	ENSG00000108591.10	ENST00000225729.8	1900	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_8	19.6701974231747	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	-8	True	NA	24	True	AATAAA	-14	NA	18087947	18107969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_75810.known	chr17	+	2531	12	FSM	ENSG00000108591.10	ENST00000467099.6	2531	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.924312725984	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTCAGACTGAGAACA	12	True	NA	25	True	AATAAA	-15	NA	18087967	18107970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18088088_18093812_18093969_18098269_18098360_18099016_18099094_18099632_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_75820.known	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	117.69214077414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	51	False	NA	NA	False	NA	NA	NA	18088006	18107600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_75823.known	chr17	+	3159	4	FSM	ENSG00000091542.9	ENST00000399138.5	3159	4	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_2	36.5908306668336	696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTCTGATGTTGTTGT	1	True	NA	21	True	AATAAA	-25	NA	18183827	18209954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18185014_18194954_18195036_18206814_18206971_18208218
transcript_75834.nic	chr17	-	4457	30	NIC	ENSG00000177731.16	novel	4181	30	NA	NA	-300	0	combination_of_known_junctions	FALSE	canonical	3	462	junction_19	160.279363722209	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATTTTTAATATTAAA	-15	True	NA	NA	False	ATTAAA	-25	NA	18259038	18244835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251814_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_75836.known	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	TRUE	canonical	3	526	junction_19	152.736870873204	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-8	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_7586.known	chr1	-	2368	10	FSM	ENSG00000131238.18	ENST00000641471.1	2368	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	713.420088182427	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTTTCAGTATTTT	0	True	NA	-15	True	AATAAA	-16	NA	40097247	40072709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40093932_40094020_40097114
transcript_75867.known	chr17	+	4212	23	FSM	ENSG00000131899.12	ENST00000316843.9	4212	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	2.265898832839	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCCACATCTGCTTTA	9	True	NA	48	True	AATAAA	-21	NA	18225634	18244875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18225764_18229940_18230039_18232494_18232577_18232671_18232803_18233777_18233937_18234012_18234176_18234272_18234409_18234648_18234704_18234838_18234994_18235088_18235313_18235469_18235538_18236606_18236761_18236834_18236940_18237480_18237774_18238066_18238215_18238455_18238610_18240577_18240874_18241450_18241716_18241884_18242000_18242165_18242279_18242507_18242629_18242742_18242823_18243907
transcript_7588.known	chr1	-	2267	9	FSM	ENSG00000131238.18	ENST00000433473.8	2267	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	570.798727661511	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-5	True	NA	-31	True	NA	NA	NA	40097252	40072725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092505_40097114
transcript_75891.known	chr17	+	540	4	FSM	ENSG00000177427.13	ENST00000578621.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	28.2960539062723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGACCGTGTGACCATC	30	True	NA	NA	False	NA	NA	NA	18260644	18263802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263672
transcript_75892.known	chr17	+	3236	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	3.85861230093008	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATCTCAGTCTGTTTG	47	True	NA	NA	False	AATAAA	-31	NA	18260661	18266552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
transcript_75894.known	chr17	+	718	3	FSM	ENSG00000177427.13	ENST00000395703.8	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGACTCTGGGGCAATG	-11	True	NA	NA	False	NA	NA	NA	18260603	18263515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18260738_18262713_18262868_18263085
transcript_75899.known	chr17	-	2929	19	FSM	ENSG00000177302.15	ENST00000580095.5	2929	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	18.1053160462833	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCAGGGTAGGGTAGAG	281	False	NA	NA	False	NA	NA	NA	18314703	18274803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18290556_18290687_18290841_18291028_18292644_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308350_18308425_18308881_18308942_18314598
transcript_759.known	chr1	-	1056	7	FSM	ENSG00000160087.21	ENST00000435198.5	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	206.076644317917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTCCAGAACGGGATTCA	0	True	NA	NA	False	NA	NA	NA	1273844	1255394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273376
transcript_7590.known	chr1	-	2340	9	FSM	ENSG00000131238.18	ENST00000530704.6	2340	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	582.173285521588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-5	True	NA	-31	True	NA	NA	NA	40097252	40072725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089583_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_75904.known	chr17	-	3239	18	FSM	ENSG00000177302.15	ENST00000582981.5	3239	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	36.1984151519866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATTTAGTGTCCTGGAA	-23	True	NA	NA	False	NA	NA	NA	18315007	18274723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18290556_18290687_18290841_18291028_18292644_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308881_18308942_18314598
transcript_75920.known	chr17	-	727	4	FSM	ENSG00000177302.15	ENST00000583328.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.0720922897661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTTAA	210	False	NA	NA	False	NA	NA	NA	18314774	18306549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18306967_18308350_18308425_18308881_18308942_18314598
transcript_75930.known	chr17	-	2527	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	35.8234883009679	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-19	True	NA	-10	True	AATAAA	-19	NA	18363550	18327872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_75939.known	chr17	-	1759	11	FSM	ENSG00000176974.21	ENST00000580002.5	1759	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	88.403676394141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGTCATAATCATTTAG	-2	True	NA	-2	True	AATAAA	-14	NA	18363495	18328469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18353671_18353818_18355885_18356001_18363371
transcript_75940.known	chr17	-	1656	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	79.5537554110427	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	80	False	NA	-9	True	ATTAAA	-12	NA	18363451	18328527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_75947.nnic	chr17	-	2299	10	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	93.7195711934885	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	NA	False	NA	-10	True	AATAAA	-19	NA	18363562	18327872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_7595.known	chr1	-	2195	8	FSM	ENSG00000131238.18	ENST00000439754.6	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	593.866851015187	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-5	True	NA	-34	True	NA	NA	NA	40097252	40072728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_75954.nnic	chr17	-	1644	10	NIC	ENSG00000176974.21	novel	1656	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	93.7195711934885	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	NA	False	NA	-9	True	ATTAAA	-12	NA	18363562	18328527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_75969.known	chr17	-	5145	4	FSM	ENSG00000249459.11	ENST00000285274.9	5145	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.1402688962847	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTTCTTTTAA	0	True	NA	3	True	AATAAA	-27	NA	18682228	18658428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18663228_18680740_18680830_18681614_18681847_18682203
transcript_75971.known	chr17	-	5859	4	FSM	ENSG00000240445.6	ENST00000395675.7	5859	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	3.2659863237109	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTCCTTTATTGCT	NA	False	NA	1	True	ATTAAA	-16	NA	18682314	18667628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18673056_18680740_18680830_18681614_18681847_18682203
transcript_75972.nic	chr17	-	3646	4	NIC	ENSG00000240445.6	novel	5859	4	NA	NA	0	-2300	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	9.10433352249844	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTTTGCTTTGCAGA	NA	False	NA	NA	False	AAAAAG	-41	NA	18682314	18669928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18673056_18680740_18680830_18681614_18681934_18682203
transcript_75977.nic	chr17	-	3916	3	ISM	ENSG00000240445.6	ENST00000395675.7	5859	4	0	2300	0	-2300	intron_retention	FALSE	canonical	3	25	junction_2	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTTTGCTTTGCAGA	NA	False	NA	NA	False	AAAAAG	-41	NA	18682314	18669928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_18673056_18680740_18680830_18681614
transcript_75978.nnic	chr17	-	3327	3	NIC	ENSG00000240445.6	novel	5859	4	NA	NA	0	-2300	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTTTGCTTTGCAGA	NA	False	NA	NA	False	AAAAAG	-41	NA	18682314	18669928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18673056_18680740_18680830_18682203
transcript_7598.known	chr1	-	1957	6	FSM	ENSG00000131238.18	ENST00000449045.7	1957	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	676.442281351484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	NA	False	NA	-43	True	NA	NA	NA	40097260	40072737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40097114
transcript_75983.nic	chr17	+	2540	11	NIC	ENSG00000108448.23	novel	1703	10	NA	NA	-31	0	intron_retention	FALSE	canonical	1	2	junction_6	4.82597140480546	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCCAGATACCGTTCTT	NA	False	NA	15	True	AATAAA	-22	NA	18697966	18736118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
transcript_75988.known	chr17	+	1809	9	FSM	ENSG00000108448.23	ENST00000572555.5	1809	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.59449398737228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACGGAGTCTCGCACT	-6	True	NA	NA	False	NA	NA	NA	18697997	18735667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
transcript_75990.known	chr17	+	1876	7	FSM	ENSG00000171928.14	ENST00000307767.13	1876	7	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	46.1398839279954	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	-2	True	NA	NA	False	TATAAA	-21	NA	18781182	18806714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18781306_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_75994.known	chr17	+	2989	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	106.452519410716	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	50	False	NA	NA	False	TATAAA	-21	NA	18781313	18806714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_75997.known	chr17	+	336	2	FSM	ENSG00000171928.14	ENST00000582288.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTAATTCTGTGCTAT	23	False	NA	NA	False	TTTAAA	-30	NA	18781286	18789669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18781306_18789352
transcript_76.known	SIRV12001	+	12029	1	FSM	SIRV12001A	SIRV12001	12029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV12001_+_0_12000
transcript_760.known	chr1	-	1047	7	FSM	ENSG00000160087.21	ENST00000360466.6	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	192.809635536079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCACCAGAGCGTGACCTC	118	False	NA	NA	False	NA	NA	NA	1273726	1255163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273498
transcript_7600.known	chr1	+	6232	8	FSM	ENSG00000117000.9	ENST00000372771.5	6232	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	18.5736262435943	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTGTTTACTCATAATG	4	True	NA	7	True	AATAAA	-18	NA	40161386	40240921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631_40195765_40202411_40202615_40222573_40222711_40231516_40231659_40235791
transcript_76002.nic	chr17	+	2028	13	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	-5	-53	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	103.808584530482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	-25	True	NA	31	True	AATAAA	-28	NA	18858124	18931215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18858262_18859339_18859476_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_76009.known	chr17	+	1958	12	FSM	ENSG00000141127.15	ENST00000268835.7	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	56.297615292331	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	-19	True	NA	35	True	AATAAA	-36	NA	18858130	18931287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_76020.nic	chr17	+	1856	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	4	-53	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	89.3548543728879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	66	False	NA	31	True	AATAAA	-28	NA	18858107	18931215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18858262_18865468_18865565_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_76023.nic	chr17	+	1806	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	11	-53	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	66.1202692069535	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	73	False	NA	31	True	AATAAA	-28	NA	18858114	18931215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_76024.nic	chr17	+	1859	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	66.1202692069535	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	73	False	NA	16	True	AATAAA	-17	NA	18858114	18931268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_76029.known	chr17	+	1540	10	FSM	ENSG00000141127.15	ENST00000395656.6	1540	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	99.6907564099112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAATAAAATAA	-13	True	NA	NA	False	NA	NA	NA	18858136	18931024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_76039.known	chr17	-	5226	6	FSM	ENSG00000188522.15	ENST00000388995.11	5226	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	20.7980768341691	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTTGTTATTGAATCT	-3	True	NA	0	True	AATAAA	-30	NA	19004764	18968788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18971749_18977583_18978851_18979548_18979674_18988246_18988415_19003519_19004170_19004708
transcript_76040.nic	chr17	-	6027	5	NIC	ENSG00000188522.15	novel	5226	6	NA	NA	-103	0	intron_retention	FALSE	canonical	3	74	junction_4	21.856063231973	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTTGTTATTGAATCT	NA	False	NA	0	True	AATAAA	-30	NA	19004867	18968788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18971749_18977583_18979674_18988246_18988415_19003519_19004170_19004708
transcript_76042.known	chr17	+	4664	10	FSM	ENSG00000072134.16	ENST00000347697.6	4664	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	23.1809841182672	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	NA	False	NA	17	True	TATAAA	-25	NA	19237376	19336715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
transcript_76052.known	chr17	+	1657	8	FSM	ENSG00000072134.16	ENST00000395628.6	1657	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	21.6059326697695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAGGTATGTACA	NA	False	NA	NA	False	ATTAAA	-36	NA	19237396	19329636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560
transcript_76053.known	chr17	+	2216	8	FSM	ENSG00000072134.16	ENST00000395618.7	2216	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	57.3880454023487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAACAGCAAC	NA	False	NA	NA	False	AAGAAA	-41	NA	19237395	19335174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
transcript_76060.known	chr17	+	537	4	FSM	ENSG00000072134.16	ENST00000582234.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.8377341429278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAACTTATAACAAAGA	18	False	NA	NA	False	NA	NA	NA	19237415	19283091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19249370_19249527_19281954_19282078_19282949
transcript_76061.known	chr17	+	309	3	FSM	ENSG00000072134.16	ENST00000582969.5	309	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAACAAAGAAAATAAAAA	99	False	NA	NA	False	TTTAAA	-3	NA	19237496	19283100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19281954_19282078_19282949
transcript_76071.known	chr17	+	3149	7	FSM	ENSG00000166484.20	ENST00000308406.9	3149	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	87.0525065054929	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGTGTAATTTTTGG	NA	False	NA	23	True	AATACA	-20	NA	19377720	19383543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378102_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_76079.known	chr17	+	2902	7	FSM	ENSG00000166484.20	ENST00000395604.8	2902	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	57.5634915163731	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	-13	True	NA	24	True	AATACA	-21	NA	19378497	19383544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_7608.known	chr1	-	1541	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTAGTGTATGTTTTA	-25	True	NA	-4	True	AATAAA	-17	NA	40257967	40256426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40256400_40258000
transcript_76083.known	chr17	+	3059	7	FSM	ENSG00000166484.20	ENST00000395602.8	3059	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	49.2634640366356	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	228	False	NA	24	True	AATACA	-21	NA	19378252	19383544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_76085.nic	chr17	+	3406	7	NIC	ENSG00000166484.20	novel	3059	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	42	junction_3	83.475878085961	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	429	False	NA	18	True	AATACA	-15	NA	19378453	19383538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19378543_19378895_19379133_19379781_19380502_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_76090.known	chr17	-	928	7	FSM	ENSG00000108641.20	ENST00000582857.2	928	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	106.720299016739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTCCCTAGCCTCCT	9001	False	NA	NA	False	NA	NA	NA	19378182	19337553	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19337749_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19377858
transcript_76093.known	chr17	-	733	7	FSM	ENSG00000108641.20	ENST00000395616.7	733	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	83.5452305972971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTTCTCAGGGCTTTGT	10	True	NA	NA	False	NA	NA	NA	19362733	19343453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343551_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_76094.known	chr17	-	1031	7	FSM	ENSG00000108641.20	ENST00000261499.11	913	7	0	-118	0	0	multi-exon	FALSE	canonical	3	139	junction_1	40.8275506109403	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-12	True	NA	NA	False	NA	NA	NA	19362723	19343056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_76095.known	chr17	-	744	7	FSM	ENSG00000108641.20	ENST00000642870.2	744	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	83.7531093950149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCCTAGGCCTGGGGCT	-2	True	NA	-10	True	AATAAA	-13	NA	19377910	19343178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19377858
transcript_761.known	chr1	-	2260	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_5	57.3626378596925	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-10	True	NA	-6	True	AAAAAG	-28	NA	1273854	1253911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
transcript_76100.nic	chr17	+	2994	6	NIC	ENSG00000166484.20	novel	2902	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	109	junction_1	62.5888168924769	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	-17	True	NA	18	True	AATACA	-15	NA	19378493	19383538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19382467_19382812_19382947_19383077
transcript_76103.nic	chr17	+	2946	6	NIC	ENSG00000166484.20	novel	3059	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	137	junction_1	53.038099513463	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	429	False	NA	18	True	AATACA	-15	NA	19378453	19383538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19382467_19382812_19382947_19383077
transcript_76108.known	chr17	-	1346	6	FSM	ENSG00000108641.20	ENST00000647252.1	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	22.969545054267	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	1	True	NA	NA	False	NA	NA	NA	19362710	19343056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_76109.known	chr17	-	601	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	89.515585235198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAGTATGAGTCAGAC	201	False	NA	-6	True	ATTAAA	-19	NA	19362542	19346949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_76112.known	chr17	-	1932	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	34.1970758983864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-7	True	NA	-12	True	AATAAA	-20	NA	19387190	19383441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
transcript_76113.known	chr17	-	1820	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	10.6282642044691	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTCAGGGGGAGTTG	-7	True	NA	-15	True	AATAAA	-17	NA	19387190	19383444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
transcript_76115.known	chr17	+	2715	5	FSM	ENSG00000166484.20	ENST00000299612.11	2715	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	110.377760441132	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	-2	True	NA	24	True	AATACA	-21	NA	19377752	19383544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378102_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_76117.nic	chr17	+	2431	5	NIC	ENSG00000166484.20	novel	3059	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	106.252058803583	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	447	False	NA	18	True	AATACA	-15	NA	19378471	19383538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19378543_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_76119.known	chr17	-	618	5	FSM	ENSG00000108641.20	ENST00000477683.5	618	5	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	12.6293309403151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGCCTGGTCGCCTC	-2	True	NA	NA	False	NA	NA	NA	19362713	19347198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_7612.known	chr1	+	3263	11	FSM	ENSG00000084073.10	ENST00000674703.1	3263	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	324.788177124722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATGTACTTTGTCTT	40	False	NA	13	True	ATTAAA	-13	NA	40258090	40294173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40258395_40260838_40260986_40262833_40262984_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_76125.known	chr17	+	2867	5	FSM	ENSG00000166484.20	ENST00000490660.2	2867	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	33.6033852461326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	118	False	NA	24	True	AATACA	-21	NA	19378891	19383544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19379133_19379781_19379948_19380607_19382467_19382812_19382947_19383077
transcript_76126.known	chr17	+	3174	14	FSM	ENSG00000128482.16	ENST00000461366.2	3174	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.27794213275663	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCTTCCCAGTATATT	-3	True	NA	6	True	AATAAA	-16	NA	19411231	19417276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19411463_19411629_19411671_19412497_19412784_19412937_19413145_19413279_19413412_19413576_19413682_19414094_19414146_19414448_19414506_19414585_19414661_19414769_19414888_19415037_19415208_19415285_19415340_19415517_19415593_19415704
transcript_76127.known	chr17	-	883	1	FSM	ENSG00000189343.7	ENST00000458332.1	883	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	5552	False	NA	NA	False	NA	NA	NA	19446852	19445969	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19446000_19446900
transcript_76128.known	chr17	+	3280	17	FSM	ENSG00000142494.13	ENST00000270570.8	3280	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	3.18198051533946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTCTACATTTTTGA	2	True	NA	NA	False	AATAAA	-15	NA	19533853	19579034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19534075_19542392_19542495_19546434_19546504_19547984_19548134_19549634_19549678_19551423_19551469_19555211_19555310_19555592_19555691_19555795_19555910_19555994_19556063_19560187_19560297_19560417_19560494_19566789_19566860_19567095_19567229_19571477_19571573_19572779_19572862_19577326
transcript_76136.known	chr17	+	1755	1	FSM	ENSG00000142494.13	ENST00000574596.1	1755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTGGCAG	8	True	NA	NA	False	AATAAA	-10	NA	19533859	19535614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19533900_19535600
transcript_76138.known	chr17	+	3828	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	143.379252334499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
transcript_76140.known	chr17	+	1708	11	FSM	ENSG00000072210.19	ENST00000672357.1	1708	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	108.779777532407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATATGCAAAC	NA	False	NA	-73	True	AATGAA	-28	NA	19648722	19675664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19648844_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_76145.known	chr17	+	3703	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	40.2246776414433	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_76153.known	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	120.922431231761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	11	False	NA	5	True	AATAAA	-13	NA	19648805	19675742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
transcript_76155.known	chr17	+	3276	8	FSM	ENSG00000072210.19	ENST00000395575.7	3276	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	129.20052441923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGACAATCCTTTGA	20	True	NA	-40	True	NA	NA	NA	19648785	19677531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_76159.known	chr17	+	3822	9	FSM	ENSG00000072210.19	ENST00000631291.2	3822	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	114.945571358796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGATGGTATTTGTCA	NA	False	NA	19	True	TATAAA	-16	NA	19648525	19677590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19671720_19671957_19675557
transcript_7616.known	chr1	+	2975	10	FSM	ENSG00000084073.10	ENST00000372759.4	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_9	53.8855669079175	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTGTCTTTAGTTTG	-1	True	NA	20	True	ATTAAA	-20	NA	40258235	40294180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_76161.known	chr17	-	3908	28	FSM	ENSG00000083290.20	ENST00000361658.6	3908	28	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	12.966031382874	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	0	True	NA	-4	True	AATAAA	-22	NA	19867936	19770829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19771068_19776308_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_76164.known	chr17	-	9149	27	FSM	ENSG00000083290.20	ENST00000395544.9	9149	27	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_16	10.2467342177973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	0	True	NA	-4	True	AATAAA	-22	NA	19867936	19770829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_76174.known	chr17	-	4063	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	21.0203982563876	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCGGCTACTTTT	-7	True	NA	NA	False	TATAAA	-16	NA	19977828	19904301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_76189.known	chr17	+	3363	15	FSM	ENSG00000128487.19	ENST00000395527.9	8255	15	4	4888	-1	-483	multi-exon	FALSE	canonical	1	5	junction_1	66.8652696525953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGCTCTGCCCACCA	8	True	NA	NA	False	NA	NA	NA	20009362	20314138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20009425_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_76191.known	chr17	+	4316	14	FSM	ENSG00000128487.19	ENST00000679048.1	4316	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	75.0851981568173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACACAAAAAATAAA	NA	False	NA	-32	True	NA	NA	NA	20008864	20314710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20009425_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20306022_20306083_20313975
transcript_76193.known	chr17	+	3754	13	FSM	ENSG00000128487.19	ENST00000680373.1	3754	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	50.3694682653424	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	-16	True	NA	-42	True	NA	NA	NA	20156050	20314700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232415_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_76198.known	chr17	+	2167	12	FSM	ENSG00000128487.19	ENST00000681731.1	2167	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	58.6853213516699	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	-9	True	NA	-42	True	NA	NA	NA	20156057	20314700	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232415_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_76201.nic	chr17	+	2139	11	NIC	ENSG00000128487.19	novel	2251	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	59.4576319743732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTCCAGGGCAACC	NA	False	NA	-13	True	AAAACA	-19	NA	20155988	20314729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20306022_20306083_20313975
transcript_76203.known	chr17	+	4561	9	FSM	ENSG00000128487.19	ENST00000681202.1	4561	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.5427961153403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACATGTTATTATA	13	True	NA	NA	False	NA	NA	NA	20009367	20238866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20009425_20017986_20018103_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232415_20236859
transcript_76204.known	chr17	+	5482	8	FSM	ENSG00000128487.19	ENST00000676570.1	5482	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	82.4247337556748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATATTCTTTTCAGT	NA	False	NA	-7	True	AATAAA	-4	NA	20008864	20239409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20009425_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_76206.known	chr17	+	2536	6	FSM	ENSG00000128487.19	ENST00000395525.7	2536	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	62.6022363817779	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGTCTTATGAAAAGT	22	False	NA	NA	False	AATAAA	-23	NA	20156088	20237179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_76208.known	chr17	+	3081	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	79.3473376995095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACGTGTGAAGAAAAA	-9	True	NA	NA	False	NA	NA	NA	20156057	20239273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_76211.known	chr17	+	8133	13	FSM	ENSG00000128487.19	ENST00000395530.6	8133	13	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	25.8327956933301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTCACTGACATTT	NA	False	NA	NA	False	AATAAA	-20	NA	20155988	20319026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_76216.nic	chr17	+	1520	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	-27	-5	17	0	multi-exon	FALSE	canonical	3	15	junction_2	14.4299072146089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	257	False	NA	NA	False	AATAAA	-29	NA	20868459	20930046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
transcript_76217.known	chr17	+	3382	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	31	False	NA	NA	False	AATAAA	-20	NA	20868519	20905230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20892229_20892433_20902217
transcript_76219.known	chr17	+	1257	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	36	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	31	False	NA	NA	False	AATAAA	-29	NA	20868519	20930046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20924358_20924834_20929430
transcript_76227.known	chr17	-	5189	13	FSM	ENSG00000124422.12	ENST00000261497.9	5189	13	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_10	65.9564250092438	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGCCAGTTTTCCTTT	-27	True	NA	-7	True	AATAAA	-17	NA	21043011	20999595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21042664
transcript_76228.known	chr17	-	1906	13	FSM	ENSG00000124422.12	ENST00000579645.5	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	234.301918235615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCCTGGCCCCCCCCTC	NA	False	NA	NA	False	AAAACA	-33	NA	21043760	21002971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21043320
transcript_76256.known	chr17	+	1910	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	21126963	21128873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21127000_21128900
transcript_76257.known	chr17	+	1479	7	FSM	ENSG00000109016.18	ENST00000579303.5	1479	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.2016948848238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTCCTTTGAATTCT	3	True	NA	52	True	AATAAA	-41	NA	21126963	21191445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21127197_21172021_21172197_21178232_21178343_21183593_21183811_21184370_21184464_21188710_21188864_21190947
transcript_76258.known	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	6	True	NA	-11	True	ATTAAA	-13	NA	21214161	21197957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21198841_21210935_21211228_21214090
transcript_76259.known	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	6	True	NA	-7	True	ATTAAA	-17	NA	21214161	21197953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21198841_21214090
transcript_76260.known	chr17	-	4931	3	FSM	ENSG00000274180.1	ENST00000611551.1	4931	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	2	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTCTCTGGTTTTCTGT	-3	True	NA	-3	True	ATTAAA	-24	NA	21253410	21238869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21243430_21244105_21244225_21253158
transcript_76261.known	chr17	+	2401	13	FSM	ENSG00000034152.19	ENST00000395491.6	2401	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.6632866996298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-4	True	NA	83	True	NA	NA	NA	21284671	21315213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21284970_21296085_21296211_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
transcript_76263.known	chr17	+	2256	12	FSM	ENSG00000034152.19	ENST00000342679.9	2256	12	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	14.7911074468456	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	1	True	NA	102	True	ATTAAA	-17	NA	21284710	21315232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21284970_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
transcript_76265.nnic	chr17	+	2171	11	NIC	ENSG00000034152.19	novel	2256	12	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	49.0559884213946	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	8598	False	NA	102	True	ATTAAA	-17	NA	21284655	21315232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_21284970_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21313491_21313538_21314146
transcript_76266.known	chr17	+	5263	3	FSM	ENSG00000184185.10	ENST00000583088.6	5263	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCCTGTGTTGAGATGT	2	True	NA	20	True	ATTAAA	-20	NA	21376356	21419870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21376914_21408518_21408641_21415286
transcript_76268.known	chr17	-	6975	2	FSM	ENSG00000212719.14	ENST00000666869.1	6975	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATAAAATTTAGTTT	NA	False	NA	-45	True	NA	NA	NA	21551689	21529257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21535539_21550995
transcript_76277.nnic	chr17	+	2289	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_6	181.757333813692	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	NA	False	NA	NA	False	AATACA	-10	NA	27294066	27312887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_76283.known	chr17	+	4187	9	FSM	ENSG00000109046.15	ENST00000467843.6	4187	9	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_5	105.785159639715	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	NA	False	NA	38	True	ATTAAA	-20	NA	27294092	27313631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27309273_27310060_27310175_27311508_27311617_27312209
transcript_76288.known	chr17	+	5105	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_5	141.619593895054	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	2	True	NA	2	True	AATAAA	-15	NA	27294113	27315926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_76299.known	chr17	+	1611	7	FSM	ENSG00000109046.15	ENST00000348811.6	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	257.474917872272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	19	False	NA	NA	False	AATACA	-10	NA	27294130	27312887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_76301.nic	chr17	+	1504	6	ISM	ENSG00000109046.15	ENST00000467843.6	4187	9	-26	5424	-9	0	5prime_fragment	FALSE	canonical	3	323	junction_5	94.4046609018856	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	27294066	27308207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743
transcript_76303.known	chr17	+	1900	5	FSM	ENSG00000109046.15	ENST00000581185.5	1900	5	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	32.5614803103299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACACAGGCGCACAATGG	2	True	NA	NA	False	NA	NA	NA	27294113	27307789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781
transcript_76306.known	chr17	+	544	2	FSM	ENSG00000109046.15	ENST00000584354.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAGTGTAGGGTAATAA	2	True	NA	NA	False	NA	NA	NA	27294113	27302009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787
transcript_76307.nic	chr17	+	2805	3	ISM	ENSG00000141068.15	ENST00000644974.2	6026	21	-2	46709	-2	-152	5prime_fragment	FALSE	canonical	3	45	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAAGAGTGGTTGTGT	1	True	NA	NA	False	AATACA	-5	NA	27456445	27579726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_27456875_27550567_27550709_27577491
transcript_76309.known	chr17	-	3995	26	FSM	ENSG00000007171.18	ENST00000646938.1	3995	26	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_17	3.71892457573423	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATGAATTGCATTTTAC	6747	False	NA	-29	True	NA	NA	NA	27793780	27756795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_27757354_27758880_27759076_27760029_27760179_27760622_27760745_27761143_27761232_27762797_27763006_27763980_27764145_27765534_27765717_27766509_27766589_27767704_27767838_27768976_27769152_27769534_27769585_27770912_27771018_27772307_27772453_27773160_27773244_27774256_27774452_27778689_27778792_27778881_27779057_27780766_27780907_27781035_27781178_27782014_27782107_27782943_27783107_27787677_27787827_27788808_27788932_27789603_27789689_27793587
transcript_76312.known	chr17	-	1419	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	12.2565175405668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-9	True	NA	-5	True	AGTAAA	-18	NA	27893365	27878357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
transcript_76314.known	chr17	-	2196	3	FSM	ENSG00000232859.10	ENST00000460380.6	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-3	True	NA	-5	True	AGTAAA	-18	NA	27893359	27878357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_27880367_27882568_27882713_27893316
transcript_76316.known	chr17	+	3526	11	FSM	ENSG00000087095.13	ENST00000407008.8	3526	11	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	11.0095413165127	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCATCTGTTTTATT	1	True	NA	18	True	ATTAAA	-17	NA	28042676	28196381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28043332_28122602_28122733_28132619_28132676_28161159_28161267_28163542_28163629_28168447_28168658_28172516_28172619_28185178_28185266_28191020_28191220_28192119_28192214_28194581
transcript_76321.known	chr17	-	1553	1	FSM	ENSG00000266830.1	ENST00000579045.1	1553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCTGTGGGCCCCCATT	3233	False	NA	NA	False	AATAAA	-18	NA	28248006	28246453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28246500_28248000
transcript_76322.known	chr17	-	852	6	FSM	ENSG00000109083.14	ENST00000585313.5	852	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	73.4373202125459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAATGGCTTGATGTA	26	True	NA	-25	True	AATAAA	-7	NA	28335439	28328336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
transcript_76323.known	chr17	-	1071	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	53.3906358830835	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGATGTACCTTTTTT	16	True	NA	-17	True	AATAAA	-15	NA	28335449	28328328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_76325.known	chr17	-	860	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	28.2001773044071	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-7	True	NA	-14	True	AATAAA	-18	NA	28335472	28328325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
transcript_76327.known	chr17	-	820	4	FSM	ENSG00000109083.14	ENST00000322326.12	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	53.0178167118271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCGGCTCACTGCAAGC	10	True	NA	NA	False	NA	NA	NA	28335455	28330190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28330529_28331858_28331988_28332145_28332383_28335339
transcript_76329.known	chr17	+	2463	3	FSM	ENSG00000109084.14	ENST00000226230.8	2463	3	0	0	0	0	multi-exon	TRUE	canonical	3	1015	junction_1	19	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	17	True	NA	12	True	AATAAA	-17	NA	28319199	28328685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28319366_28325502_28325648_28326533
transcript_76332.known	chr17	-	1104	3	FSM	ENSG00000109083.14	ENST00000582797.5	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGCTGGGATTGCAGG	-5	True	NA	NA	False	NA	NA	NA	28335470	28329684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28330529_28331858_28331988_28335339
transcript_76334.known	chr17	+	1075	2	FSM	ENSG00000109084.14	ENST00000582384.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGTGTATCACCTGT	86	False	NA	-50	True	ACTAAA	-17	NA	28319268	28327511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28319366_28326533
transcript_76341.known	chr17	-	2670	11	FSM	ENSG00000004142.12	ENST00000540200.6	2670	11	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_7	30.6	1232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGAGTTCAATGTTA	-26	True	NA	-13	True	ATTAAA	-14	NA	28357527	28346632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354586_28355794_28355877_28357287
transcript_76359.known	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	5.76387215526353	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	-2	True	NA	9	True	AATAAA	-17	NA	28335760	28347009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_76367.known	chr17	+	1656	6	FSM	ENSG00000109079.10	ENST00000544907.6	1656	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	46.1666546329708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAGAATCAATCTGAG	16	False	NA	NA	False	NA	NA	NA	28335601	28345255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28335857_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_76368.known	chr17	+	582	5	FSM	ENSG00000109079.10	ENST00000583213.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.5190441649503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGGACCGTGTCCGCCG	-2	True	NA	NA	False	NA	NA	NA	28335760	28344510	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28335857_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_76372.known	chr17	+	10277	9	FSM	ENSG00000004139.14	ENST00000585482.6	10277	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	7.21110255092798	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCATTTACTGGCCTG	10	True	NA	NA	False	AATAAA	-17	NA	28371693	28404049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28372503_28381202_28381822_28384356_28384570_28384838_28384931_28385039_28385276_28388173_28388277_28388349_28388540_28395904_28396027_28396156
transcript_76373.known	chr17	-	1626	8	FSM	ENSG00000109072.14	ENST00000226218.9	1626	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_3	4.05069910821652	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATTATTGTTCTGA	-9	True	NA	-4	True	AATAAA	-17	NA	28370307	28367283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28367482_28367714_28368060_28368520_28368674_28368871_28369029_28369288_28369429_28369506_28369852_28369926_28370047_28370139
transcript_76380.known	chr17	+	3082	6	FSM	ENSG00000244045.13	ENST00000292114.8	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	5.34415568635495	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTATCTTTGCTTCAT	-9	True	NA	19	True	ATTAAA	-16	NA	28357646	28363683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361156
transcript_76390.known	chr17	+	735	5	FSM	ENSG00000244045.13	ENST00000483505.6	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	3.39116499156263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGGGAGAACTGTAACT	52	False	NA	NA	False	NA	NA	NA	28357707	28361234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360848_28361156
transcript_76395.known	chr17	-	6492	5	FSM	ENSG00000076351.13	ENST00000612814.5	6492	5	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	3.49106001094224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTGAGTTCTGTGAGT	-22	True	NA	-8	True	AATAAA	-22	NA	28406212	28394641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28399714_28400609_28400767_28402237_28402322_28404615_28405469_28405886
transcript_76399.known	chr17	-	5363	4	FSM	ENSG00000076351.13	ENST00000618626.1	5363	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	7.03957069398096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGAGTGTCTTTGTAT	-11	True	NA	9	True	NA	NA	NA	28406201	28395675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28399714_28400609_28400767_28404615_28405469_28405886
transcript_76405.known	chr17	-	1435	2	FSM	ENSG00000076351.13	ENST00000582590.1	1435	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCCCACCGCCTATTCA	22	True	NA	NA	False	NA	NA	NA	28406168	28404315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28405469_28405886
transcript_76406.known	chr17	+	585	1	FSM	ENSG00000263266.2	ENST00000571702.1	585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATGACTAAATAAAA	42	False	NA	NA	False	NA	NA	NA	28467821	28468406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28467800_28468400
transcript_76411.known	chr17	-	1379	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	31.4880929876676	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-15	True	NA	-8	True	AATAAA	-18	NA	28552624	28546707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
transcript_76416.known	chr17	-	1653	4	FSM	ENSG00000109103.12	ENST00000301032.8	1653	4	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	15.9652400197707	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-22	True	NA	-8	True	AATAAA	-18	NA	28552631	28546707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28547850_28547998_28548102_28548591_28548706_28552337
transcript_76420.known	chr17	-	2815	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_7	21.6168915434204	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-16	True	NA	-5	True	AATAAA	-29	NA	28571536	28553386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
transcript_76421.known	chr17	-	2397	11	FSM	ENSG00000087111.21	ENST00000268758.13	2397	11	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_10	91.1754352882398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTACTCTTTCT	-8	True	NA	-1	True	AATAAA	-33	NA	28571528	28553382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571462
transcript_76428.known	chr17	-	2529	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_11	24.4729569082837	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-4	True	NA	-5	True	AATAAA	-29	NA	28571524	28553386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
transcript_76429.known	chr17	-	1722	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_9	62.1118067939573	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGTCTGTTTTACA	7643	False	NA	0	True	AATAAA	-19	NA	28576948	28573114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
transcript_76431.known	chr17	-	1608	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_8	21.9598354957409	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTACTTTGCCTGTCTGTT	3	True	NA	-5	True	AATAAA	-14	NA	28576895	28573119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
transcript_76433.known	chr17	-	7428	39	FSM	ENSG00000007202.15	ENST00000528896.7	7428	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	74.1777503208292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCATTTTTGTGTGTGTG	-13	True	NA	-10	True	AAAAAG	-16	NA	28645158	28614445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28617000_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_76442.nic	chr17	-	3245	24	NIC	ENSG00000076382.17	novel	3786	24	NA	NA	-51	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_22	139.549884028347	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	3332	False	NA	-13	True	AATAAA	-15	NA	28599076	28577573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28592475_28598509_28598636_28598895
transcript_76446.known	chr17	-	3786	24	FSM	ENSG00000076382.17	ENST00000321765.10	3786	24	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_17	70.0284036351678	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-6	True	NA	-13	True	AATAAA	-15	NA	28599025	28577573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
transcript_76501.known	chr17	-	1582	11	FSM	ENSG00000007202.15	ENST00000580882.5	1582	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	28.1211664053965	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATGATAAGGAATGTC	-10	True	NA	NA	False	AATAAA	-17	NA	28645155	28639060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_76513.known	chr17	-	735	4	FSM	ENSG00000132581.10	ENST00000591903.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	135.381764733003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCCTGCCACAAGTTC	340	False	NA	NA	False	NA	NA	NA	28661819	28648924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28661725
transcript_76514.known	chr17	-	583	4	FSM	ENSG00000132581.10	ENST00000587338.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	5.24933858267454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGACCTATCAGTGGGCA	-30	True	NA	NA	False	NA	NA	NA	28662189	28649126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28662045
transcript_76515.known	chr17	-	1309	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	11	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTATCTGTTACTGC	3	True	NA	NA	False	AATAAA	-17	NA	28661906	28648345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28655286_28655484_28661725
transcript_76516.known	chr17	-	1025	3	FSM	ENSG00000132581.10	ENST00000592250.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	130.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-26	True	NA	-3	True	GATAAA	-20	NA	28662185	28648588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28655286_28655484_28662045
transcript_76518.known	chr17	+	5569	38	FSM	ENSG00000109111.15	ENST00000347486.8	5569	38	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	86.9516124475651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTCTTTGGTGGTCAAC	-9	True	NA	23	True	CATAAA	-17	NA	28662197	28701735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28662343_28672756_28672859_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_76520.known	chr17	+	6404	37	FSM	ENSG00000109111.15	ENST00000314616.11	6404	37	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	44.3167175072487	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCCTCTGCCGTTCAT	-2	True	NA	7	True	AGTAAA	-15	NA	28662204	28702679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_76529.nic	chr17	+	551	5	ISM	ENSG00000109111.15	ENST00000314616.11	6404	37	-7	27680	0	0	5prime_fragment	FALSE	canonical	3	284	junction_4	8.26135582092915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACGAGGACGATGACGA	-9	True	NA	-32	True	NA	NA	NA	28662197	28674999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969
transcript_76532.nnic	chr17	+	467	2	NNC	ENSG00000109111.15	novel	6404	37	NA	NA	6	-3417	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATTCTCTTCAAATC	4	True	NA	NA	False	AAAAAG	-9	NA	28662210	28670906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_28662343_28670571
transcript_76536.nic	chr17	-	1817	5	NIC	ENSG00000167525.15	novel	1684	5	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	24.6614577833509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	9521	False	NA	-5	True	AATAAA	-18	NA	28711322	28703196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28704213_28704306_28704436_28704707_28704844_28706679_28706764_28710870
transcript_76539.nic	chr17	-	1758	4	NIC	ENSG00000167525.15	novel	1566	4	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.7919455049082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	9496	False	NA	-5	True	AATAAA	-18	NA	28711347	28703196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28704213_28704306_28704436_28704707_28704844_28710870
transcript_76540.known	chr17	-	1566	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	20.4993224820291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	12	True	NA	-5	True	AATAAA	-18	NA	28711854	28703196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
transcript_76541.known	chr17	-	1007	4	FSM	ENSG00000167525.15	ENST00000579650.5	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	23.3285709425636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCGCCACCGCCTCCC	-6	True	NA	NA	False	NA	NA	NA	28711299	28704080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28704213_28704306_28704617_28704707_28704844_28710870
transcript_76549.known	chr17	-	863	11	FSM	ENSG00000109113.20	ENST00000436730.7	863	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	357.163883952451	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGCCCAGCCCTAGG	18	True	NA	NA	False	NA	NA	NA	28718161	28714624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_7655.known	chr1	-	2852	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_30	49.0354625438433	1035	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-2	True	NA	-6	True	NA	NA	NA	40317286	40300488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_76550.known	chr17	-	1592	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	356.879825711681	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	6	True	NA	-1	True	ATTAAA	-19	NA	28718415	28714283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_76555.known	chr17	-	1184	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	446.390871322432	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	13	True	NA	-2	True	ATTAAA	-18	NA	28718166	28714284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_7656.known	chr1	+	2905	10	FSM	ENSG00000084070.12	ENST00000372718.8	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	15.7087692738408	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTTGCTTGGCCATT	-11	True	NA	9	True	AATAAA	-13	NA	40373726	40423322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40374224_40406735_40406870_40408652_40408739_40409756_40409836_40413015_40413103_40414158_40414241_40415271_40415382_40416175_40416342_40416779_40417097_40421975
transcript_76566.known	chr17	-	1293	10	FSM	ENSG00000109113.20	ENST00000415040.6	1293	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	500.585163756218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	-4	True	NA	-2	True	ATTAAA	-18	NA	28718183	28714284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28716902_28716995_28717212_28717426_28718121
transcript_76573.nic	chr17	-	1754	9	NIC	ENSG00000109113.20	novel	1741	10	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_8	396.165980840102	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	9964	False	NA	-1	True	ATTAAA	-19	NA	28717973	28714283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28717212
transcript_76574.known	chr17	-	914	9	FSM	ENSG00000109113.20	ENST00000430132.6	914	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_8	430.744685834892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGGCTGAGGAGACTGT	9532	False	NA	NA	False	NA	NA	NA	28718405	28714646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28718121
transcript_76585.known	chr17	-	1741	10	FSM	ENSG00000109113.20	ENST00000395245.9	1741	10	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_8	121.045446010992	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	0	True	NA	-1	True	ATTAAA	-19	NA	28717868	28714283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_76586.known	chr17	-	1597	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	345.438851318146	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	5	True	NA	-1	True	ATTAAA	-19	NA	28717748	28714283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_76607.known	chr17	+	3573	15	FSM	ENSG00000160602.14	ENST00000268766.11	3573	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.4892247247004	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	-8	True	NA	12	True	AATAAA	-14	NA	28728787	28743455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28728861_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737515_28737674_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
transcript_7662.known	chr1	+	2109	6	FSM	ENSG00000187801.15	ENST00000411995.6	2109	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.54312667664022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	12	True	NA	15	True	ATTAAA	-20	NA	40450106	40463718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
transcript_7664.known	chr1	+	2382	5	FSM	ENSG00000187801.15	ENST00000469416.1	2382	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTTCCCAACTCTTAA	7	True	NA	11	True	ATTAAA	-16	NA	40450101	40463714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457440_40462420
transcript_76653.known	chr17	+	580	6	FSM	ENSG00000198242.14	ENST00000394935.7	580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6717.78128253667	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATGCCTGTCTGTCA	9	True	NA	55	True	AATATA	-23	NA	28720263	28723933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720329_28720413_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_76654.known	chr17	+	636	5	FSM	ENSG00000198242.14	ENST00000496182.5	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	5907.74417078973	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	78	False	NA	58	True	AATATA	-26	NA	28720078	28723936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720214_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_76655.known	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	5901.40197326025	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	-11	True	NA	58	True	AATATA	-26	NA	28720243	28723936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_76657.known	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	2.94392028877595	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-12	True	NA	1	True	AATGAA	-15	NA	28726233	28724347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
transcript_76658.known	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	119.04714285619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	1005	False	NA	-104	True	NA	NA	NA	28726932	28724452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
transcript_76659.known	chr17	-	578	4	FSM	ENSG00000160606.11	ENST00000580518.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	108.677913528412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTACTTTTCCCGCCTC	2	True	NA	NA	False	NA	NA	NA	28727935	28724598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28727818
transcript_7666.known	chr1	+	1976	5	FSM	ENSG00000187801.15	ENST00000484445.5	1976	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.0096118312577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACGAACATTAAAA	12	True	NA	-23	True	NA	NA	NA	40450106	40463680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40450176_40450664_40451089_40456944_40457072_40457343_40457440_40462420
transcript_76662.known	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	11065	junction_1	1714.97208432091	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	3	True	NA	35	True	AATAAA	-23	NA	28719984	28724359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_76673.known	chr17	+	2894	7	FSM	ENSG00000076604.16	ENST00000262395.10	2894	7	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_3	19.8053023203384	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGCCTTACTGTCTTG	-13	True	NA	15	True	ATTAAA	-15	NA	28744010	28750956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28744256_28747212_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510_28748667_28748944
transcript_7668.known	chr1	+	2796	6	FSM	ENSG00000187815.10	ENST00000372706.6	2796	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9.00222194794152	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGATTTGCAGACCAGC	2	True	NA	83	True	AATAAA	-17	NA	40477289	40496343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40477895_40479035_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
transcript_76684.known	chr17	+	789	6	FSM	ENSG00000076604.16	ENST00000586813.5	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	96.8194195396771	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAGCTGTAACACCGC	12	True	NA	NA	False	NA	NA	NA	28744035	28748603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28744256_28747217_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510
transcript_76688.nic	chr17	+	2139	6	NIC	ENSG00000076604.16	novel	2894	7	NA	NA	-52	43	intron_retention	FALSE	canonical	3	242	junction_3	18.3891272223561	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCCAGCCTGACTTA	5732	False	NA	27	True	AATAAA	-21	NA	28743958	28750080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_28744256_28747212_28747265_28747842_28748179_28748261_28748424_28748510_28748667_28748944
transcript_7669.known	chr1	-	605	2	FSM	ENSG00000238287.1	ENST00000450713.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCGGGTTCAAGCGAT	-2	True	NA	NA	False	NA	NA	NA	40508661	40493156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40493689_40508588
transcript_7670.known	chr1	+	1899	4	FSM	ENSG00000164002.12	ENST00000415550.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	7.84573486395988	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAACTGATGGTTTTT	0	True	NA	11	True	AATAAA	-19	NA	40508766	40516038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508909_40509450_40509626_40509732_40509791_40514514
transcript_76705.known	chr17	+	1841	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	0	0	0	0	multi-exon	TRUE	canonical	3	494	junction_9	42.2727767519593	787	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	-5	True	NA	33	True	AATAAA	-22	NA	28855015	28861061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
transcript_76725.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583522.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	33.431833632034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	NA	False	NA	-18	True	AGTAAA	-15	NA	28842839	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759765_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_76726.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583307.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	137.07912860826	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	60	False	NA	-18	True	AGTAAA	-15	NA	28842727	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_7673.known	chr1	+	1878	4	FSM	ENSG00000164002.12	ENST00000432259.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.84573486395988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	0	True	NA	9	True	AATAAA	-17	NA	40508766	40516036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508890_40509450_40509626_40509732_40509791_40514514
transcript_76733.known	chr17	-	4050	4	FSM	ENSG00000173065.14	ENST00000577682.6	4050	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	16.539514973407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759765_28766585_28766708_28834292_28834327_28842681
transcript_76735.known	chr17	-	4169	4	FSM	ENSG00000173065.14	ENST00000581229.6	4169	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	148.728686614998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	4	True	NA	-18	True	AGTAAA	-15	NA	28842783	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28842681
transcript_76736.known	chr17	-	4162	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	145.249976094854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
transcript_7674.known	chr1	+	1691	3	FSM	ENSG00000164002.12	ENST00000443729.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	10	False	NA	9	True	AATAAA	-17	NA	40508797	40516036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508909_40509732_40509791_40514514
transcript_76745.known	chr17	-	4010	3	FSM	ENSG00000173065.14	ENST00000582266.6	4010	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	3	True	NA	-18	True	AGTAAA	-15	NA	28842784	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759765_28766585_28766708_28842681
transcript_76748.known	chr17	-	4246	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	31.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	1	True	NA	-18	True	AGTAAA	-15	NA	28812435	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28812208
transcript_76749.known	chr17	-	4128	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	142	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28842681
transcript_7675.known	chr1	+	1606	2	FSM	ENSG00000164002.12	ENST00000419161.2	1606	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	18	False	NA	9	True	AATAAA	-17	NA	40508805	40516036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508890_40514514
transcript_76750.nic	chr17	-	2781	3	NIC	ENSG00000173065.14	novel	4246	3	NA	NA	-44	-1397	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	105.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGGTTCTCTCTACA	-43	True	NA	NA	False	ATTAAA	-20	NA	28812479	28757376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28759765_28766585_28766708_28812208
transcript_7676.known	chr1	+	1677	2	FSM	ENSG00000164002.12	ENST00000420209.2	1677	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	13	True	NA	9	True	AATAAA	-17	NA	40508753	40516036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508909_40514514
transcript_76761.known	chr17	-	2679	12	FSM	ENSG00000132589.16	ENST00000580805.5	2679	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	495.860884249732	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	19	True	NA	-7	True	AATAAA	-17	NA	28897653	28879338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28885856_28885948_28888944_28889027_28897525
transcript_76765.known	chr17	-	2668	11	FSM	ENSG00000132589.16	ENST00000394908.9	2668	11	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_5	106.818584525353	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-61	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
transcript_76767.known	chr17	-	2585	11	FSM	ENSG00000132589.16	ENST00000585169.5	2585	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	502.67866475513	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCTGCATTGTGTCTTC	20	True	NA	-9	True	AATAAA	-15	NA	28897652	28879340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28885856_28885948_28888944_28889027_28897525
transcript_76768.nic	chr17	-	2599	11	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_7	374.324738696229	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-61	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883176_28883232_28884224_28884316_28888944_28889027_28897525
transcript_7677.known	chr1	+	2567	2	FSM	ENSG00000164002.12	ENST00000372703.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGAACTGATGGTTTT	6	True	NA	10	True	AATAAA	-18	NA	40508746	40516037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40509791_40514514
transcript_76773.nnic	chr17	-	2586	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_9	394.001410036958	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-61	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28897525
transcript_76788.known	chr17	-	1929	5	FSM	ENSG00000167536.14	ENST00000378895.9	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	32.7060774168961	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-27	True	NA	-9	True	AATAAA	-18	NA	28903079	28897780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582_28902702_28902817
transcript_7679.known	chr1	+	1625	2	FSM	ENSG00000164002.12	ENST00000418186.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	8	False	NA	9	True	AATAAA	-17	NA	40508774	40516036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508878_40514514
transcript_76791.nnic	chr17	-	1826	4	NIC	ENSG00000167536.14	novel	1929	5	NA	NA	-19	0	intron_retention	FALSE	canonical	3	20	junction_3	108.077132949883	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	NA	False	NA	-12	True	AATAAA	-15	NA	28903098	28897783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28898893_28900989_28901302_28901492_28901617_28902817
transcript_76795.known	chr17	-	1569	3	FSM	ENSG00000167536.14	ENST00000426464.2	1569	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	106.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-11	True	NA	-12	True	AATAAA	-15	NA	28902965	28897783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28898893_28900989_28901302_28902817
transcript_76797.known	chr17	-	2037	4	FSM	ENSG00000167536.14	ENST00000394901.7	2037	4	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	18.6607133363712	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-19	True	NA	-9	True	AATAAA	-18	NA	28903071	28897780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582
transcript_7680.known	chr1	+	1028	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	16.9926454679664	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGCCAGGCTGATT	16	True	NA	NA	False	NA	NA	NA	40531662	40545037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_76800.nic	chr17	+	2231	8	NIC	ENSG00000179761.12	novel	1829	11	NA	NA	-32255	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	74.288736202271	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	3660	False	NA	28	True	AATAAA	-33	NA	29010885	29057216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_29011147_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_76804.known	chr17	+	2169	8	FSM	ENSG00000179761.12	ENST00000323372.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	18.5075825608019	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	5	True	NA	28	True	AATAAA	-33	NA	29043140	29057216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_29043340_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_7681.known	chr1	+	2019	5	FSM	ENSG00000117010.17	ENST00000372699.8	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	9.54921462739214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	-10	True	NA	5	True	AATAAA	-17	NA	40531636	40548167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_76824.known	chr17	-	4506	15	FSM	ENSG00000109118.14	ENST00000332830.9	4506	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_14	24.9591502995088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGACTGTCTGTC	-26	True	NA	-9	True	TATAAA	-19	NA	28951518	28905249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28906518_28906855_28906995_28907589_28907673_28908782_28908882_28910225_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
transcript_7683.known	chr1	+	562	4	FSM	ENSG00000117010.17	ENST00000465152.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	22.365648262955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAATAGAAGTTATACT	6	True	NA	NA	False	TATAAA	-41	NA	40531652	40546765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40531788_40540585_40540713_40541614_40541711_40546561
transcript_76833.known	chr17	-	7679	11	FSM	ENSG00000109118.14	ENST00000577226.5	7679	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_10	26.9154230878877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTTCTGACTGTCT	31	True	NA	-12	True	TATAAA	-16	NA	28951307	28905252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
transcript_76838.known	chr17	-	4206	17	FSM	ENSG00000063015.21	ENST00000317338.17	4206	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6.71286079104878	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGGCCAGGTGAATGAT	7	True	NA	NA	False	ATTAAA	-40	NA	29006033	28954904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28955995_28956158_28956262_28956349_28956468_28956718_28956758_28957044_28957243_28957347_28957540_28957946_28958142_28959024_28959222_28959333_28959473_28959697_28959893_28960504_28960672_28960804_28960974_28963961_28964148_28969756_28969953_28979679_28979814_28981370_28982040_29005814
transcript_7684.known	chr1	-	7259	8	FSM	ENSG00000117016.10	ENST00000372684.8	7259	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	8.0609919883805	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTGTTGCTTTCTGT	9	True	NA	-3	True	ATTAAA	-17	NA	40665682	40620679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647843_40665393
transcript_76844.known	chr17	-	9980	42	FSM	ENSG00000196535.18	ENST00000527372.7	9980	42	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_32	28.7968535527576	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTCTTTTGTCTTTGT	6	True	NA	NA	False	AATAAA	-23	NA	29180398	29071121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29074915_29082315_29082439_29085603_29085649_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
transcript_76847.known	chr17	-	7504	41	FSM	ENSG00000196535.18	ENST00000531253.5	7504	41	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	29.841414175605	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCAGTTTTCCTGCCTG	2	True	NA	-11	True	AATAAA	-19	NA	29180364	29073518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29074915_29082315_29082439_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
transcript_76859.known	chr17	-	549	3	FSM	ENSG00000196535.18	ENST00000528322.6	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	41	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGCACCCTCAAGGCTA	-1	True	NA	NA	False	NA	NA	NA	29140389	29121546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29121958_29122165_29122254_29140339
transcript_76862.known	chr17	-	10877	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	10.3708994574027	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTTGTTATCTTTT	-1	True	NA	-13	True	AATAAA	-16	NA	29294148	29255838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
transcript_76864.known	chr17	+	12643	20	FSM	ENSG00000160551.12	ENST00000261716.8	12643	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.09715799074286	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGTCCAGTTTTTTTA	2	True	NA	17	True	AATAAA	-17	NA	29390362	29551903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_29391025_29451454_29451681_29467144_29467217_29475669_29475772_29477660_29477707_29478250_29478348_29480367_29480482_29482196_29482289_29489663_29489758_29491783_29491866_29495559_29495728_29498317_29498522_29502588_29502724_29507895_29508133_29510863_29510993_29517452_29517657_29522279_29522520_29530406_29530620_29534117_29534301_29542560
transcript_76878.known	chr17	+	1473	7	FSM	ENSG00000167543.16	ENST00000301057.8	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	26.2958594121246	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	-13	True	NA	27	True	ATTAAA	-15	NA	29568700	29573157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_29568831_29569017_29569087_29569317_29569360_29571590_29571720_29571856_29572058_29572141_29572698_29572811
transcript_76879.nnic	chr17	+	1222	6	NNC	ENSG00000167543.16	novel	1473	7	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	167.687089544783	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	556	False	NA	27	True	ATTAAA	-15	NA	29568659	29573157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_29568831_29569017_29569087_29569317_29569360_29571590_29571629_29572141_29572698_29572811
transcript_76884.nnic	chr17	+	1385	6	NIC	ENSG00000167543.16	novel	1473	7	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	162.022714456955	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	556	False	NA	27	True	ATTAAA	-15	NA	29568659	29573157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_29568831_29569017_29569087_29569317_29569360_29571856_29572058_29572141_29572698_29572811
transcript_76897.known	chr17	-	3492	2	FSM	ENSG00000168792.5	ENST00000307201.5	3492	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTACTGCCGGTGAA	-30	True	NA	-18	True	AATAAA	-17	NA	29567037	29560546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29563087_29566085
transcript_76902.nnic	chr17	-	3591	21	NNC	ENSG00000108262.16	novel	3783	20	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	94.6780861657015	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTCTGATGCTTAGAG	3	True	NA	-23	True	AATAAA	-14	NA	29589629	29573474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326_29589406_29589578
transcript_76904.nnic	chr17	-	3639	21	NNC	ENSG00000108262.16	novel	3783	20	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	94.6780861657015	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTCTGATGCTTAGAG	14	False	29589668	-23	True	AATAAA	-14	NA	29589654	29573474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326_29589420_29589569
transcript_76905.nnic	chr17	-	3640	21	NNC	ENSG00000108262.16	novel	3783	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	94.6780861657015	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTCTGATGCTTAGAG	-16	True	NA	-23	True	AATAAA	-14	NA	29589648	29573474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326_29589433_29589575
transcript_76913.known	chr17	+	3550	15	FSM	ENSG00000198720.13	ENST00000394859.8	3550	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	8.21521733847421	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTTGCTACCTAACTTT	-15	True	NA	12	True	AATAAA	-18	NA	29593131	29614761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_29593736_29607741_29607878_29607985_29608111_29608194_29608241_29608850_29608995_29609085_29609276_29609354_29609422_29610684_29610767_29611578_29611644_29611875_29612007_29612115_29612274_29612401_29612555_29612651_29612816_29612886_29612964_29613353
transcript_76929.known	chr17	-	570	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTGATACCTATATT	-21	True	NA	NA	False	NA	NA	NA	29930228	29925276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29925556_29929937
transcript_76932.known	chr17	+	1242	8	FSM	ENSG00000126653.18	ENST00000475652.5	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	177.605386937975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGAACCGACCCAGTG	9	True	NA	16	True	AAGAAA	-17	NA	30116828	30185193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_76934.known	chr17	+	2506	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	78.9444248963929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCATTTATTTTAAAA	-4	True	NA	19	True	AATAAA	-22	NA	30116815	30186475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_76944.known	chr17	+	2420	6	FSM	ENSG00000126653.18	ENST00000612959.4	2420	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	155.444652529445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	-13	True	NA	18	True	AATAAA	-21	NA	30116806	30186474	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_76949.nic	chr17	+	412	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-29	7331	6	0	5prime_fragment	FALSE	canonical	3	233	junction_1	88.3544000036218	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	-3	True	NA	NA	False	AAAAAG	-8	NA	30116786	30179144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_76950.nic	chr17	+	532	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-29	7211	6	0	5prime_fragment	FALSE	canonical	3	233	junction_1	88.3544000036218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAGAAAAGAGGGCT	-3	True	NA	NA	False	AAGAAA	-26	NA	30116786	30179264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_76952.nic	chr17	+	322	4	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-29	8311	6	0	5prime_fragment	FALSE	canonical	3	233	junction_1	92.3628111790069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAAATTGCTTTTG	-3	True	NA	28	True	AAAAAG	-8	NA	30116786	30178164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070
transcript_76953.known	chr17	+	2057	7	FSM	ENSG00000126653.18	ENST00000540900.7	2057	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	197.240687711458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCTGAATTTATATATA	NA	False	NA	89	True	NA	NA	NA	30115520	30185847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30115624_30116645_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_76955.known	chr17	+	582	4	FSM	ENSG00000126653.18	ENST00000585881.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	206.856364551724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	172	False	NA	NA	False	AAAAAG	-8	NA	30116991	30179144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30117333_30172541_30172599_30178070_30178200_30179089
transcript_76956.known	chr17	-	2307	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_8	37.309737722552	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	23	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
transcript_76958.nic	chr17	-	2076	10	NIC	ENSG00000108578.15	novel	2307	12	NA	NA	-141	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	132.879040883703	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	NA	False	NA	-16	True	AATAAA	-19	NA	30292197	30248202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286852_30291491_30291509_30291806
transcript_7696.known	chr1	+	1536	11	FSM	ENSG00000066136.21	ENST00000425457.6	1536	11	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_8	102.68417599611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATATTTCTCCTTTTG	-2	True	NA	37	True	ATTAAA	-38	NA	40691715	40771139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770708
transcript_76961.known	chr17	+	5987	9	FSM	ENSG00000108587.16	ENST00000451249.7	5987	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	70.7582813174543	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	-9	True	NA	NA	False	NA	NA	NA	30477407	30527592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_76963.known	chr17	+	6039	9	FSM	ENSG00000108587.16	ENST00000225724.9	6039	9	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_2	85.8297733889587	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	30477361	30527592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_76967.known	chr17	+	1011	9	FSM	ENSG00000108587.16	ENST00000467337.6	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	155.582725181814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	6	True	NA	NA	False	ATTAAA	-14	NA	30477422	30522609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477487_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_76968.known	chr17	+	947	9	FSM	ENSG00000108587.16	ENST00000414833.2	947	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	160.16163710452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTTTCTAACACATT	25	False	NA	NA	False	NA	NA	NA	30477441	30522558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477487_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_76982.known	chr17	+	1273	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	28.6569751059358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	168	False	NA	NA	False	AATAAA	-22	NA	30600891	30634326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
transcript_76987.nic	chr17	+	2858	6	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-470	0	intron_retention	FALSE	canonical	3	99	junction_1	20.0339711490258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATTTTAAGAAGTTAAG	19	True	NA	NA	False	AATAAA	-19	NA	30600421	30634323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30633391_30633993
transcript_76991.nic	chr17	+	1291	5	ISM	ENSG00000214719.13	ENST00000651170.1	1273	7	-488	2191	-488	-2027	5prime_fragment	FALSE	canonical	3	99	junction_1	18.0190871022924	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAACTGCGCAACCACA	1	True	NA	NA	False	TTTAAA	-23	NA	30600403	30632135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754
transcript_77.known	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	1156.46264098759	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_77000.known	chr17	-	2873	8	FSM	ENSG00000176390.12	ENST00000324238.7	2873	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.6418390534633	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTACTTTTTTCTTC	16	True	NA	-8	True	AATAAA	-17	NA	30824692	30782683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_77001.known	chr17	+	563	7	FSM	ENSG00000264538.7	ENST00000579526.5	563	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	102.95630140987	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCCTTTGAATCCTGAC	595	False	NA	NA	False	AAAAAG	-2	NA	30709607	30768876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30709812_30734896_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833
transcript_77018.nic	chr17	+	2399	3	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-8	39188	-4	-32601	5prime_fragment	FALSE	canonical	3	69	junction_2	1.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAACAAAAGATCTGAGAA	-25	True	NA	NA	False	AAGAAA	-4	NA	30831961	30837251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30832414_30834147_30836049_30837205
transcript_7702.known	chr1	+	1455	11	FSM	ENSG00000066136.21	ENST00000372654.5	1455	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.468381167038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATATTTATGGCATTTT	58	False	NA	0	True	ATTAAA	-9	NA	40691837	40771102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40691868_40712686_40712822_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_77020.nic	chr17	+	1884	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-76	40928	-72	-34341	5prime_fragment	FALSE	canonical	3	72	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTAAAGAAGAAGAATAAGA	1012	False	NA	NA	False	AATAAA	-3	NA	30831893	30835511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30832414_30834147
transcript_77021.nic	chr17	+	1870	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-8	40874	-4	-34287	5prime_fragment	FALSE	canonical	3	72	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGAGGGAAACACTCAAA	-25	True	NA	NA	False	AAGAAA	-33	NA	30831961	30835565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30832414_30834147
transcript_77022.known	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	8.80656320908194	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-10	True	NA	-5	True	AATAAA	-13	NA	30906238	30898985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
transcript_77024.known	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-7	True	NA	-5	True	AATAAA	-13	NA	30906235	30898985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30900563_30904065_30904530_30906167
transcript_77025.nnic	chr17	-	839	3	NIC	ENSG00000172171.11	novel	1306	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	58	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-7	True	NA	-5	True	AATAAA	-13	NA	30906235	30898985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_30899607_30900412_30900563_30906167
transcript_77028.known	chr17	-	559	2	FSM	ENSG00000172171.11	ENST00000541382.2	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATTTGAGAACCTACT	-7	True	NA	NA	False	NA	NA	NA	30906235	30904038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30904530_30906167
transcript_77029.known	chr17	+	2098	6	FSM	ENSG00000181481.14	ENST00000535306.6	2098	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	42.3622473435959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGAGTTCTGTGAGT	16	True	NA	21	True	AATAAA	-21	NA	30971059	30999911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30993839_30993905_30997241_30997332_30998661
transcript_77031.known	chr17	+	2054	5	FSM	ENSG00000181481.14	ENST00000328381.10	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	20.4006740084733	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGAGTTCTGTGAGT	-5	True	NA	21	True	AATAAA	-21	NA	30971038	30999911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30997241_30997332_30998661
transcript_77034.known	chr17	+	1905	4	FSM	ENSG00000181481.14	ENST00000324689.8	1905	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	28.1937739383873	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGAGTTCTGTGA	-21	True	NA	19	True	AATAAA	-19	NA	30971022	30999909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30971446_30984616_30984761_30997241_30997332_30998661
transcript_77037.nic	chr17	+	4587	31	ISM	ENSG00000196712.19	ENST00000358273.9	12373	58	-84	124678	-34	-1295	5prime_fragment	TRUE	canonical	1	1	junction_16	4.1639991461201	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAAGTTTGGAGAACTT	-15	True	NA	NA	False	AATAAA	-34	NA	31094892	31252997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004_31219119_31221849_31221930_31223443_31223568_31225094_31225251_31226434_31226685_31227217_31227292_31227522_31227607_31229024_31229466_31229834_31229975_31230259_31230383_31230841_31230926_31232072_31232190_31232699_31232882_31233001_31233214_31235610_31235773_31235917_31236022_31248983_31249120_31252937
transcript_77048.nnic	chr17	+	4703	14	NNC	ENSG00000131242.18	novel	1968	13	NA	NA	-21	-2930	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	58.6488900806512	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGAACCTGCACGAGG	NA	False	NA	NA	False	NA	NA	NA	31487978	31535281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_31488273_31517650_31517878_31521165_31521361_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615_31534474_31535191
transcript_77052.known	chr17	+	1968	13	FSM	ENSG00000131242.18	ENST00000394744.6	1968	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	26.5145400362392	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGTTACGTGTACCCGTG	-28	True	NA	NA	False	NA	NA	NA	31487999	31531849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_31488273_31517650_31517878_31521165_31521361_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615
transcript_7706.nic	chr1	+	1904	10	NIC	ENSG00000066136.21	novel	1955	10	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	72.6265604579386	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGGCATTTTCTTGA	NA	False	NA	5	True	ATTAAA	-14	NA	40691570	40771107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_77063.known	chr17	-	868	4	FSM	ENSG00000172301.11	ENST00000302362.11	868	4	0	0	0	0	multi-exon	FALSE	canonical	2	450	junction_2	86.8498064988569	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGCTTCGTCTGCTT	-13	True	NA	-13	True	AATAAA	-16	NA	31859244	31851870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31859100
transcript_77066.nic	chr17	-	2176	20	NIC	ENSG00000108651.10	novel	4330	19	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	146.671226740157	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGTCTTGCTCTGTTG	NA	False	NA	-7	True	ATTAAA	-17	NA	31901762	31863172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_31863517_31865365_31865439_31866654_31866716_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_77069.known	chr17	-	4330	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	30.1205397292321	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTACTTTAGAACA	-3	True	NA	-29	True	ATTAAA	-13	NA	31901708	31860903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_7707.nic	chr1	+	2400	10	NIC	ENSG00000066136.21	novel	1955	10	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	72.6265604579386	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	NA	False	NA	24	True	AATAAA	-16	NA	40691570	40771603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_7708.known	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	84.0860817008527	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	25	True	NA	22	True	AATAAA	-14	NA	40691742	40771601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
transcript_77080.known	chr17	+	4495	16	FSM	ENSG00000178691.11	ENST00000322652.10	4495	16	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_4	36.8573225047917	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGTTTTGGGGTTTTT	-3	True	NA	21	True	TATAAA	-6	NA	31937006	32001038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_77091.known	chr17	+	3977	15	FSM	ENSG00000178691.11	ENST00000580398.1	3977	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	76.4131159272692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTTAGGGGAGATGT	15	True	NA	NA	False	NA	NA	NA	31937066	32000649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_771.nic	chr1	-	2085	7	NIC	ENSG00000160087.21	novel	2260	7	NA	NA	0	84	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	199.972220292942	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTGGTCACTTAGAA	-11	True	NA	-24	True	AGTAAA	-17	NA	1273855	1254900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1272852
transcript_77100.nic	chr17	+	1512	11	ISM	ENSG00000178691.11	ENST00000322652.10	4495	16	-25	7751	-25	-6089	5prime_fragment	FALSE	canonical	3	247	junction_4	23.7537365481728	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATACTCCAAATGAAAACC	NA	False	NA	NA	False	AAGAAA	-7	NA	31936981	31993287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241
transcript_77104.nic	chr17	+	1443	10	ISM	ENSG00000178691.11	ENST00000580398.1	3977	15	-85	7362	-25	-6089	5prime_fragment	FALSE	canonical	3	38	junction_3	80.9088803134751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATACTCCAAATGAAAACC	NA	False	NA	NA	False	AAGAAA	-7	NA	31936981	31993287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31937521_31940285_31940333_31940421_31940487_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241
transcript_77105.nic	chr17	+	1698	6	ISM	ENSG00000178691.11	ENST00000322652.10	4495	16	-25	26965	-25	6484	5prime_fragment	FALSE	canonical	3	247	junction_4	28.3478394238432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTAGGCATGATGGCCT	NA	False	NA	NA	False	AATACA	-5	NA	31936981	31974073	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145
transcript_77106.nic	chr17	+	1847	6	ISM	ENSG00000178691.11	ENST00000322652.10	4495	16	-25	26816	-25	6633	5prime_fragment	FALSE	canonical	3	247	junction_4	28.3478394238432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTAAAGTTAGGAAAT	NA	False	NA	NA	False	AAGAAA	-10	NA	31936981	31974222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145
transcript_77110.known	chr17	+	3091	15	FSM	ENSG00000185158.12	ENST00000543378.6	3091	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	29.5002594246635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATGGTAATAAATT	600	False	NA	6	True	AATAAA	-19	NA	32007987	32053486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32008133_32017971_32018055_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
transcript_77116.nic	chr17	+	3433	13	NIC	ENSG00000185158.12	novel	3091	15	NA	NA	-489	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.5043856274784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTTACTTTGTGGTTG	-5	True	NA	-67	True	ATTAAA	-30	NA	32007382	32053413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_32008133_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
transcript_77121.known	chr17	+	393	2	FSM	ENSG00000185158.12	ENST00000581370.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCCGAAGCTTTGT	648	False	NA	13	True	AATAAA	-14	NA	32008035	32017220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32008133_32016924
transcript_77123.known	chr17	+	431	3	FSM	ENSG00000264164.1	ENST00000358484.4	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	12.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACACATGGACATAACTG	NA	False	NA	NA	False	AAGAAA	-17	NA	32083178	32096989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32083323_32095061_32095202_32096842
transcript_77129.known	chr17	+	860	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTCATTTATTTAT	3	True	NA	NA	False	ATTAAA	-16	NA	32127594	32128454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32127600_32128500
transcript_77130.known	chr17	+	3289	21	FSM	ENSG00000126858.19	ENST00000583994.5	3289	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	115.210285999124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	NA	False	NA	10	True	AATAAA	-20	NA	32142474	32225727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171042_32171102_32172936_32173061_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
transcript_77133.known	chr17	+	3297	21	FSM	ENSG00000126858.19	ENST00000358365.7	3297	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	104.534731070587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	NA	False	NA	10	True	AATAAA	-20	NA	32142465	32225727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32211115_32211239_32224615
transcript_77138.known	chr17	+	2771	20	FSM	ENSG00000126858.19	ENST00000578205.5	2771	20	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	99.7160789386144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATCCCAAGTGTAAATC	95	False	NA	25	True	AATAAA	-24	NA	32142672	32225503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171042_32171102_32172936_32173061_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
transcript_77141.known	chr17	+	2960	20	FSM	ENSG00000126858.19	ENST00000394692.6	2960	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_19	83.5223857397979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	102	False	NA	10	True	AATAAA	-20	NA	32142679	32225727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
transcript_77144.known	chr17	+	3165	20	FSM	ENSG00000126858.19	ENST00000545287.7	3165	20	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	93.1850688882715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	4	True	NA	10	True	AATAAA	-20	NA	32142501	32225727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
transcript_77150.known	chr17	+	2919	19	FSM	ENSG00000126858.19	ENST00000354266.7	2919	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	84.4801094275386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTCCATCATCAG	13	False	NA	24	True	AATAAA	-29	NA	32142559	32225666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171046_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
transcript_7716.known	chr1	+	2363	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	92.0962995731193	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	11	True	NA	24	True	AATAAA	-16	NA	40709356	40771603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_77165.known	chr17	-	1599	2	FSM	ENSG00000214708.4	ENST00000398832.2	1599	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGATTTTTTGTTTTG	32	False	NA	NA	False	ATTAAA	-21	NA	32143135	32141225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32142714_32143024
transcript_77172.known	chr17	+	13740	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_8	262.148560493082	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	-5	True	NA	14	True	AATAAA	-20	NA	32350156	32381885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_77178.known	chr17	+	2124	11	FSM	ENSG00000010244.19	ENST00000394673.6	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_8	169.709192444016	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTTTTTATTCATAAC	NA	False	NA	28	True	AATAAA	-15	NA	32350137	32370343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32367771_32368015_32369294_32369455_32369598
transcript_7718.known	chr1	+	1202	10	FSM	ENSG00000066136.21	ENST00000372651.5	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	71.5227668147668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGGACACTGGTGCAC	60	False	NA	NA	False	NA	NA	NA	40709542	40770940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_77181.known	chr17	+	2283	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	398.5993602604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	NA	False	NA	21	True	AATAAA	-22	NA	32350131	32370451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_77191.nic	chr17	-	1363	10	NIC	ENSG00000108666.10	novel	4547	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	201.113566590289	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGAGTCCTAGATA	8683	False	NA	-28	True	AATAAA	-14	NA	32341945	32331595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341800
transcript_77193.known	chr17	-	4581	10	FSM	ENSG00000108666.10	ENST00000225805.8	4581	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	157.527971257155	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGTTGTTTTTGTTTA	8419	False	NA	-3	True	AATAAA	-16	NA	32342209	32328442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337957_32338209_32338352_32339812_32339939_32341203_32341285_32341999
transcript_77204.known	chr17	-	776	7	FSM	ENSG00000108666.10	ENST00000583221.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.321495870906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACATTAACAGGTAAAG	8419	False	NA	NA	False	AAAACA	-4	NA	32342209	32334788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339925_32341203_32341285_32341999
transcript_77224.known	chr17	+	3850	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_5	139.509919903494	2587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	20	True	NA	NA	False	AATAAA	-19	NA	32444509	32483319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
transcript_77225.known	chr17	+	3317	14	FSM	ENSG00000108671.11	ENST00000649012.1	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_13	561.412620251375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATATATTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	32444460	32483295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32481310
transcript_77232.known	chr17	+	2159	13	FSM	ENSG00000108671.11	ENST00000457654.6	2159	13	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_5	142.40571929838	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGCCCCCAAGGGGCCT	-16	True	NA	NA	False	NA	NA	NA	32444473	32481471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488
transcript_77261.known	chr17	+	3948	2	FSM	ENSG00000176749.9	ENST00000313401.4	3948	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGACCTCTTTTTGT	13	True	NA	69	True	AATAAA	-17	NA	32486992	32491253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32487163_32487475
transcript_77265.known	chr17	-	5510	22	FSM	ENSG00000176658.17	ENST00000318217.10	5510	22	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_19	15.049577931569	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATTAAGCACAAATC	20	True	NA	75	True	AATAAA	-27	NA	32877124	32492521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32494916_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_77267.known	chr17	-	3500	22	FSM	ENSG00000176658.17	ENST00000579584.5	3500	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	26.1232904484652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAAAATATGTCTG	0	True	NA	NA	False	AATAAA	-20	NA	32877144	32594202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32594567_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_77272.known	chr17	+	896	9	FSM	ENSG00000006042.12	ENST00000439138.5	896	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	343.725544584629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGCAATTTAGTGCCT	31	True	NA	NA	False	GATAAA	-34	NA	32928209	32940978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32928238_32930899_32930972_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_77275.known	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_1	89.5975127205788	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	-26	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_77280.nic	chr17	+	1707	7	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	580	junction_1	96.5500733643774	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	0	True	NA	-4	True	NA	NA	NA	32928033	32941613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_32928238_32931326_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_77281.known	chr17	+	1683	7	FSM	ENSG00000006042.12	ENST00000394642.7	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	254.11398361103	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	24	False	NA	-4	True	NA	NA	NA	32927909	32941613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32928238_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_77284.nnic	chr17	+	1337	6	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	308.830309393362	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	37	False	NA	-4	True	NA	NA	NA	32928070	32941613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_32928238_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_77285.nnic	chr17	+	1299	5	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	67	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	348.219399229853	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	48	False	NA	-4	True	NA	NA	NA	32927976	32941613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_32928238_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_77286.known	chr17	+	1937	3	FSM	ENSG00000263571.3	ENST00000667899.1	1937	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	34155613	34162199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34156703_34159042_34159116_34161424
transcript_77289.known	chr17	+	741	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_2	17	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	1	True	NA	22	True	AATAAA	-18	NA	34255284	34257203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34255426_34256221_34256340_34256721
transcript_77292.known	chr17	+	3055	20	FSM	ENSG00000005156.12	ENST00000262327.9	3055	20	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_19	78.7123871394883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAAGCAGGTCCAGCAA	14	True	NA	NA	False	NA	NA	NA	34980545	35003172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35002994
transcript_77296.known	chr17	+	8382	20	FSM	ENSG00000005156.12	ENST00000378526.9	8382	20	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	29.29768882757	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAGGAGGGAAACTGA	-20	True	NA	NA	False	NA	NA	NA	34980511	35009743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_77310.nic	chr17	+	3214	20	NIC	ENSG00000005156.12	novel	8382	20	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	80.0727162596391	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTGTCCTTTCCCCA	-23	True	NA	24	True	AATAAA	-12	NA	34980508	35004802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_34980623_34983231_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_77311.nic	chr17	+	3476	20	NIC	ENSG00000005156.12	novel	8382	20	NA	NA	-3	260	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	80.0727162596391	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGTTCTCCTATTA	-23	True	NA	22	True	AAGAAA	-24	NA	34980508	35005064	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_34980623_34983231_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_77326.known	chr17	-	1847	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	3.96881333523521	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAATATTTAAATATTT	-3	True	NA	60	True	AATAAA	-16	NA	34961460	34927860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
transcript_7733.known	chr1	-	1687	1	FSM	ENSG00000272145.1	ENST00000606277.1	1687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGTTACTT	13	True	NA	NA	False	NA	NA	NA	40692066	40690379	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40690400_40692100
transcript_77331.known	chr17	-	7293	7	FSM	ENSG00000092871.17	ENST00000315249.11	7293	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	19.8781007364609	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	576	False	NA	NA	False	ATTAAA	-20	NA	35089319	35005989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35089104
transcript_77334.nic	chr17	-	3776	6	NIC	ENSG00000092871.17	novel	7293	7	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	34.0411515668903	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCCTGTCTGGTGCG	556	False	NA	-9	True	AATAAA	-14	NA	35089339	35009115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35026373_35026562_35089104
transcript_77342.known	chr17	-	9966	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	19.9078122267195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCTATAAATATGTCA	-17	True	NA	NA	False	AATAAA	-17	NA	35119860	35092220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
transcript_77343.nic	chr17	-	1811	10	NIC	ENSG00000185379.21	novel	1571	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	25.7164020293145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-21	True	NA	-12	True	TATAAA	-15	NA	35119864	35100382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106127_35106250_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
transcript_77346.known	chr17	-	1528	10	FSM	ENSG00000185379.21	ENST00000590016.5	1528	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	27.9567567309511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGAGCATCTCTGATG	30	True	NA	NA	False	NA	NA	NA	35119813	35100671	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35116858_35117038_35119110_35119173_35119531
transcript_7735.known	chr1	+	3335	11	FSM	ENSG00000117013.17	ENST00000506017.1	3335	11	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	5.45985347788748	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGTTCTTGGTTTT	1773	False	NA	8	True	ATTAAA	-13	NA	40818963	40840451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40818991_40819346_40819473_40819874_40819986_40820164_40820261_40822313_40822403_40824096_40824259_40831083_40831305_40833013_40833114_40834966_40835099_40837664_40837795_40838310
transcript_77351.known	chr17	-	1732	10	FSM	ENSG00000185379.21	ENST00000587977.5	1732	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	30.0793190098906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTCTGCCTTTCCA	5	True	NA	-110	True	NA	NA	NA	35119838	35100529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35116858_35117038_35118500_35118620_35119110_35119173_35119531
transcript_77352.known	chr17	-	1571	9	FSM	ENSG00000185379.21	ENST00000586044.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	16.0058583025091	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	3	True	NA	-12	True	TATAAA	-15	NA	35119746	35100382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
transcript_77354.known	chr17	-	1064	9	FSM	ENSG00000185379.21	ENST00000460118.6	1064	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	25.7436278523444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATCTTGGGTTCCTTGGC	5	True	NA	NA	False	NA	NA	NA	35119744	35100826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107062_35107365_35107448_35119110_35119173_35119531
transcript_7736.known	chr1	+	2947	20	FSM	ENSG00000171793.16	ENST00000649124.1	2947	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	159.92340618207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAGTAAGGCAGAAC	28	True	NA	NA	False	NA	NA	NA	40979720	41012539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40980885_40981044_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77361.known	chr17	-	1409	8	FSM	ENSG00000185379.21	ENST00000588594.5	1409	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	25.4822867650356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	1791	False	NA	-12	True	TATAAA	-15	NA	35119719	35100382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35107365_35107448_35119110_35119173_35119531
transcript_77363.known	chr17	-	1353	7	FSM	ENSG00000185379.21	ENST00000335858.11	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	20.5946325261921	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	4	True	NA	-12	True	TATAAA	-15	NA	35119745	35100382	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35119110_35119173_35119531
transcript_77372.nic	chr17	-	1977	14	NIC	ENSG00000073536.18	novel	5193	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	70.6705834201667	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTGTGTTGGGTTC	9006	False	NA	-23	True	NA	NA	NA	35142311	35132070	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_35132450_35133170_35133242_35133338_35133499_35134942_35135060_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_77374.known	chr17	-	5193	13	FSM	ENSG00000073536.18	ENST00000442241.9	5193	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_12	27.1890245421853	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCCCAACCGGATCC	-9	True	NA	11	True	AATAAA	-39	NA	35142303	35128729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_7738.known	chr1	+	4006	19	FSM	ENSG00000171793.16	ENST00000648020.1	4006	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	120.562570200429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGAGACATGCTTTG	25	True	NA	NA	False	AATAAA	-11	NA	40979717	41012554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_40999829_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77389.known	chr17	-	5286	12	FSM	ENSG00000073536.18	ENST00000586869.5	5286	12	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_10	19.4906207577045	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTGACTCATCCTG	10	True	NA	-12	True	AATAAA	-16	NA	35142284	35128752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978
transcript_7739.known	chr1	+	2840	19	FSM	ENSG00000171793.16	ENST00000650070.2	2840	19	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_11	25.1553813303743	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	3	True	NA	NA	False	AATAAA	-22	NA	40979695	41012565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77390.known	chr17	-	2539	6	FSM	ENSG00000172123.13	ENST00000394562.5	2539	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.81280999384984	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAACACTTTTATTCTTA	59	False	NA	0	True	AATAAA	-28	NA	35433196	35411059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35430470_35430593_35432187_35432258_35432904
transcript_77394.known	chr17	-	6004	7	FSM	ENSG00000154760.14	ENST00000526861.5	6004	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	37.5218454888467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTTCACGAATTAA	-7	True	NA	NA	False	NA	NA	NA	35448782	35437542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35446716_35446754_35447267_35447415_35448721
transcript_77396.known	chr17	-	3058	7	FSM	ENSG00000154760.14	ENST00000534689.5	3058	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	36.0343200604954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCAGTGAGTTTATG	11	True	NA	NA	False	AAAAAG	-13	NA	35448764	35439479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35444702_35445655_35445694_35447267_35447415_35448721
transcript_77401.known	chr17	-	8398	6	FSM	ENSG00000154760.14	ENST00000285013.11	8398	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	23.2155120555201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTTTTTACTCTGC	9	True	NA	0	True	AATAAA	-19	NA	35448766	35435095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
transcript_77409.known	chr17	+	5700	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	0	0	0	0	multi-exon	TRUE	canonical	2	100	junction_14	63.8072494264177	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	10	True	NA	NA	False	AATAAA	-18	NA	35587321	35726413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_7741.nic	chr1	+	2480	19	NIC	ENSG00000171793.16	novel	2037	18	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	103.264388588793	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGAAACTTGTCACTT	-14	True	NA	NA	False	TTTAAA	-40	NA	40980001	41011779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40980562_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77414.nic	chr17	+	3528	22	NIC	ENSG00000006125.18	novel	3483	22	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_1	76.4986624162405	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACTTTACTGTTTTA	27	True	NA	17	True	ATTAAA	-23	NA	35587338	35724089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_77416.nic	chr17	+	5767	22	NIC	ENSG00000006125.18	novel	5700	22	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_1	76.4986624162405	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	3	True	NA	NA	False	AATAAA	-18	NA	35587423	35726413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_77417.known	chr17	+	3415	22	FSM	ENSG00000006125.18	ENST00000618940.4	3415	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	85.2234624311453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGCACTTTACTGTT	35	True	NA	14	True	ATTAAA	-20	NA	35587514	35724086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587664_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_7742.nic	chr1	+	3266	19	NIC	ENSG00000171793.16	novel	2037	18	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	103.264388588793	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	-14	True	NA	NA	False	AATAAA	-22	NA	40980001	41012565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40980562_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77420.known	chr17	+	5702	21	FSM	ENSG00000006125.18	ENST00000621914.4	5702	21	0	0	0	0	multi-exon	FALSE	canonical	2	181	junction_14	40.1239018541318	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGTTTGTGGTATG	-38	True	NA	NA	False	AATAAA	-14	NA	35587273	35726409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_7743.nic	chr1	+	1963	18	ISM	ENSG00000171793.16	ENST00000650070.2	2840	19	-31	2311	-23	665	5prime_fragment	FALSE	canonical	3	459	junction_11	25.5182952213399	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGTACTTTAAAGTT	-28	True	NA	8	True	AATAAA	-20	NA	40979664	41010254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160
transcript_77431.nic	chr17	+	2535	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_14	73.5477076877482	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	-49	True	NA	19	True	AATAAA	-24	NA	35587262	35660120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_77433.known	chr17	+	2542	14	FSM	ENSG00000006125.18	ENST00000616784.4	2542	14	0	0	0	0	multi-exon	FALSE	canonical	2	221	junction_9	37.4092985940899	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATCTTTCTTCCCTT	8145	False	NA	NA	False	NA	NA	NA	35586898	35657791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598
transcript_77437.known	chr17	-	1604	3	FSM	ENSG00000108733.11	ENST00000586663.2	1604	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAAGGGAATCATGT	-4	True	NA	NA	False	ATTAAA	-15	NA	35578552	35575788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35576182_35577037_35577592_35577895
transcript_77438.known	chr17	+	1298	2	FSM	ENSG00000267321.4	ENST00000592381.1	1298	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGTCTGAATGAAAAATT	11	True	NA	NA	False	TATAAA	-20	NA	35568119	35574792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35568502_35573876
transcript_77439.known	chr17	+	2140	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	15.9114214743163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	6	True	NA	38	True	AATAAA	-20	NA	35809488	35847234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_77443.known	chr17	+	760	7	FSM	ENSG00000270647.7	ENST00000605197.3	2388	7	0	1628	0	627	multi-exon	FALSE	canonical	3	20	junction_1	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGTTAAGAGACTTTA	23	False	NA	NA	False	NA	NA	NA	35809505	35824289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820249_35820331_35820438_35822639_35822834_35824077
transcript_77445.known	chr17	+	2103	1	FSM	ENSG00000270647.7	ENST00000604434.1	2103	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGCCATTAATAATTTT	-1	True	NA	NA	False	ATTAAA	-15	NA	35809481	35811584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35809500_35811600
transcript_77449.known	chr17	+	3215	4	FSM	ENSG00000270885.2	ENST00000603017.2	3215	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	26.6374840320094	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTGTTGGCTCCATTC	-24	True	NA	27	True	ATTAAA	-31	NA	35731638	35743521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35731879_35735037_35735401_35740408_35740534_35741034
transcript_7745.known	chr1	+	2855	18	FSM	ENSG00000171793.16	ENST00000498694.2	2855	18	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_11	25.5088016562463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	48	False	NA	NA	False	AATAAA	-3	NA	40979740	41012546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77453.known	chr17	-	1163	7	FSM	ENSG00000278023.7	ENST00000620284.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	22.6764684689266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	1	True	NA	-19	True	AATAAA	-16	NA	35930773	35918079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_77454.known	chr17	-	1032	6	FSM	ENSG00000278023.7	ENST00000616596.4	1032	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	33.3142612104786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGAGGCGGGGCCGCGG	47	False	NA	-5	True	AATAAA	-30	NA	35930727	35918065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_77455.known	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.9032558571174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	10	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_77458.known	chr17	-	1535	6	FSM	ENSG00000278023.7	ENST00000619262.4	1535	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	23.2843294943187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	5	True	NA	-19	True	AATAAA	-16	NA	35930769	35918079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075
transcript_7746.known	chr1	+	2648	18	FSM	ENSG00000171793.16	ENST00000648914.1	2648	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	121.616505435996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATAGCTACGTGGCAC	12	True	NA	NA	False	NA	NA	NA	40979704	41012479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77471.known	chr17	-	3931	26	FSM	ENSG00000278259.5	ENST00000614623.5	3931	26	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_14	31.3591836628443	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATGTCAAGTTTT	-10	True	NA	-2	True	AGTAAA	-15	NA	36534868	36495635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_7748.known	chr1	+	4009	18	FSM	ENSG00000171793.16	ENST00000648801.1	4009	18	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_10	24.571905638611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAATAGGCATAGCT	4	True	NA	NA	False	NA	NA	NA	40979756	41012470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77498.nnic	chr17	-	1739	12	NNC	ENSG00000278259.5	novel	1640	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	67.0374263298168	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-17	True	NA	-26	True	ATTAAA	-21	NA	36534875	36513085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36530975_36531068_36532526_36532682_36533952_36534105_36534760
transcript_77503.known	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	12.879829191414	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-10	True	NA	-26	True	ATTAAA	-21	NA	36534868	36513085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_77505.known	chr17	+	881	5	FSM	ENSG00000273611.5	ENST00000620863.4	881	5	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_2	319.905747838328	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	15	True	NA	81	True	AATAAA	-21	NA	36486699	36495822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36486934_36486967_36492817_36492900_36493925_36494007_36495222
transcript_77508.known	chr17	+	926	4	FSM	ENSG00000273611.5	ENST00000619730.4	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	306.805403400194	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCTTTTTAAAGGA	NA	False	NA	82	True	AATAAA	-22	NA	36486628	36495823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36495222
transcript_77510.known	chr17	+	2816	2	FSM	ENSG00000277161.2	ENST00000614443.2	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGATTGTCAATACTTG	-22	True	NA	32	True	AATAAA	-39	NA	36534986	36539303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36535593_36537093
transcript_77511.known	chr17	+	2264	2	FSM	ENSG00000277161.2	ENST00000620233.1	2264	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATACTTGTTTATTG	27	True	NA	39	True	TATAAA	-40	NA	36535554	36539310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36535602_36537093
transcript_77512.known	chr17	+	1981	4	FSM	ENSG00000273611.5	ENST00000612728.4	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	326.197281819862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATAAGGCAAAATTGG	-7	True	NA	NA	False	AATAAA	-26	NA	36486677	36499310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36497605
transcript_77513.known	chr17	+	834	5	FSM	ENSG00000273611.5	ENST00000620324.4	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	313.088246345978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGTTAGGGATGGATC	10	True	NA	36	True	NA	NA	NA	36486694	36498148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36497605
transcript_77514.known	chr17	+	2816	14	FSM	ENSG00000278311.5	ENST00000613102.5	2816	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	62.253632768694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	-16	True	NA	NA	False	AATAAA	-28	NA	36544918	36589848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
transcript_77519.nnic	chr17	+	2386	13	NNC	ENSG00000278311.5	novel	2816	14	NA	NA	-34	-135	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_6	40.5102010472534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCACGATGACTACTGCG	432	False	NA	20	True	AATAAA	-27	NA	36545469	36589442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
transcript_77521.nic	chr17	+	1901	12	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	-20	3695	-13	0	5prime_fragment	FALSE	canonical	3	94	junction_1	66.657010319946	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	-36	True	NA	NA	False	NA	NA	NA	36544898	36586153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_77522.nnic	chr17	+	1907	12	NNC	ENSG00000278311.5	novel	2816	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_1	62.350117803278	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	-36	True	NA	NA	False	NA	NA	NA	36544898	36586153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_77524.nic	chr17	+	1851	11	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	551	3695	-34	0	internal_fragment	FALSE	canonical	3	112	junction_6	51.2226512394663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	432	False	NA	NA	False	NA	NA	NA	36545469	36586153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_77527.nic	chr17	+	1433	9	ISM	ENSG00000278311.5	ENST00000618837.4	2346	10	-33	4707	-13	-1026	5prime_fragment	FALSE	canonical	3	94	junction_1	72.0850192481073	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAGAATAGACGAAAAAA	-36	True	NA	NA	False	AAGAAA	-15	NA	36544898	36581451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343
transcript_77528.nnic	chr17	+	1439	9	NNC	ENSG00000278311.5	novel	2346	10	NA	NA	-13	-1026	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_1	67.3060872061361	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAGAATAGACGAAAAAA	-36	True	NA	NA	False	AAGAAA	-15	NA	36544898	36581451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343
transcript_7753.known	chr1	+	2019	17	FSM	ENSG00000171793.16	ENST00000480420.6	2019	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	125.313840391834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTTATTATGCGGA	-5	True	NA	NA	False	TTTAAA	-15	NA	40979687	41011754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_77532.nic	chr17	+	1314	8	ISM	ENSG00000278311.5	ENST00000618837.4	2346	10	607	4707	35	-1026	internal_fragment	FALSE	canonical	3	112	junction_6	56.9446562686177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAGAATAGACGAAAAAA	-51	True	NA	NA	False	AAGAAA	-15	NA	36545538	36581451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343
transcript_77533.nnic	chr17	+	1303	8	NNC	ENSG00000278311.5	novel	2346	10	NA	NA	52	-1026	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_6	48.3520254730548	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAGAATAGACGAAAAAA	-34	True	NA	NA	False	AAGAAA	-15	NA	36545555	36581451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343
transcript_77535.nic	chr17	+	779	5	ISM	ENSG00000278311.5	ENST00000617860.4	3497	8	-20	21659	-13	0	5prime_fragment	TRUE	canonical	3	94	junction_1	82.3847680096266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGATGTCAGTTGCA	-36	True	NA	NA	False	AAAAAG	-8	NA	36544898	36560818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772
transcript_77536.known	chr17	+	695	4	FSM	ENSG00000278311.5	ENST00000616019.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	20.0166597280032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGATGTCAGTTGCA	466	False	NA	NA	False	AAAAAG	-8	NA	36545503	36560818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772
transcript_77537.known	chr17	+	2315	2	FSM	ENSG00000278311.5	ENST00000611219.1	2315	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATCTCAAAATAAC	-23	True	NA	NA	False	AATAAA	-17	NA	36544911	36547747	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36545098_36545618
transcript_77542.known	chr17	+	1515	7	FSM	ENSG00000278535.5	ENST00000618403.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	51.4805788623244	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	-7	True	NA	16	True	ATTAAA	-20	NA	36591878	36600804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
transcript_77546.nic	chr17	+	1458	6	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	134.59123299829	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	4906	False	NA	16	True	ATTAAA	-20	NA	36591842	36600804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599051_36599971_36600038_36600161
transcript_77552.nnic	chr17	+	1334	6	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	131.391628348232	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	-36	True	NA	16	True	ATTAAA	-20	NA	36591849	36600804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36592157_36598162_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
transcript_77568.known	chr17	+	638	3	FSM	ENSG00000278535.5	ENST00000612205.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	187.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCTGAGTCTATTAG	29	True	NA	12	True	ATTAAA	-25	NA	36591914	36597013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36592157_36594970_36595181_36596827
transcript_77569.nnic	chr17	+	2377	3	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	11	junction_2	185.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	-12	True	NA	16	True	ATTAAA	-20	NA	36591873	36600804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36592157_36594970_36595181_36598920
transcript_77578.known	chr17	+	1839	5	FSM	ENSG00000278619.5	ENST00000614766.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_1	8.61321658847611	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	-34	True	NA	13	True	AATAAA	-14	NA	36601582	36608964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36602353_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_7759.known	chr1	+	1607	13	FSM	ENSG00000171793.16	ENST00000463285.6	1607	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	143.659391733828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAGCAGTTTGACTTT	5	True	NA	NA	False	AATAAA	-15	NA	40979757	41004250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41003980
transcript_77592.known	chr17	-	640	2	FSM	ENSG00000277268.2	ENST00000614277.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTATTCTCTTCTGCCT	4	True	NA	-15	True	AATAAA	-20	NA	36936658	36906994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_36907540_36936563
transcript_77593.known	chr17	-	1462	2	FSM	ENSG00000277268.2	ENST00000621428.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGGTGCGTGCCCG	1834	False	NA	-4	True	AATAAA	-31	NA	36936622	36932108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_36933512_36936563
transcript_77594.nic	chr17	+	2227	6	NIC	ENSG00000273706.5	novel	3425	5	NA	NA	-1	-469	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.1841219819155	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTCCCCACCCCCTTCC	-6	True	NA	NA	False	CATAAA	-3	NA	36936783	36943216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36937246_36937738_36938368_36940289_36940517_36940609_36940888_36942199_36942366_36942751
transcript_77595.nic	chr17	+	2958	6	NIC	ENSG00000273706.5	novel	3425	5	NA	NA	-1	262	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.1841219819155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTATTGAACTAAAAACAG	-6	True	NA	NA	False	AAAAAG	-18	NA	36936783	36943947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36937246_36937738_36938368_36940289_36940517_36940609_36940888_36942199_36942366_36942751
transcript_77596.nic	chr17	+	2321	6	NIC	ENSG00000273706.5	novel	3425	5	NA	NA	0	-469	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	24.4327648865207	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTCCCCACCCCCTTCC	-5	True	NA	NA	False	CATAAA	-3	NA	36936784	36943216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36937341_36937738_36938368_36940289_36940517_36940609_36940888_36942199_36942366_36942751
transcript_77601.known	chr17	+	3425	5	FSM	ENSG00000273706.5	ENST00000614239.1	3425	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	9.52299847737046	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGGTGTGTTATTTG	108	False	NA	20	True	AATAAA	-40	NA	36937474	36944612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36938368_36940289_36940517_36940609_36940888_36942199_36942366_36942751
transcript_77603.nic	chr17	+	2697	5	NIC	ENSG00000273706.5	novel	3425	5	NA	NA	-1	-469	intron_retention	FALSE	canonical	3	5	junction_1	26.892145693492	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTCCCCACCCCCTTCC	-6	True	NA	NA	False	CATAAA	-3	NA	36936783	36943216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36938368_36940312_36940517_36940609_36940888_36942199_36942366_36942751
transcript_77607.known	chr17	+	1963	11	FSM	ENSG00000275700.6	ENST00000680579.1	1963	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	253.147407650167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	6718	False	NA	5	True	AATAAA	-5	NA	36948924	37056858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_77608.known	chr17	+	2018	11	FSM	ENSG00000275700.6	ENST00000680340.1	2018	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_10	225.077431120937	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCTTGTGATTTCTT	6718	False	NA	17	True	AATAAA	-17	NA	36948924	37056870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37056600
transcript_77609.known	chr17	+	2712	11	FSM	ENSG00000275700.6	ENST00000679881.1	2712	11	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_1	58.634119759744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGCCACCACCGCTT	310	False	NA	7	True	AATAAA	-7	NA	36949289	37056860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_77610.known	chr17	+	1940	11	FSM	ENSG00000275700.6	ENST00000616434.2	1940	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	248.67892954571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	6718	False	NA	5	True	AATAAA	-5	NA	36948924	37056858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_77612.nic	chr17	-	889	4	NIC	ENSG00000278540.5	novel	451	4	NA	NA	-124	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	59.4866931898779	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	9505	False	NA	1	True	AATAAA	-24	NA	37359245	37328644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_37328987_37330172_37330426_37339803_37339851_37358998
transcript_77616.known	chr17	+	4236	16	FSM	ENSG00000276234.5	ENST00000615182.5	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.22030007562579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACTCTTCTCTGTG	-18	True	NA	5	True	AATAAA	-18	NA	37406885	37479725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_77622.known	chr17	+	1948	16	FSM	ENSG00000276234.5	ENST00000612272.4	1948	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	15.9284511348579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCCTAACACCTCTTG	-12	True	NA	5	True	ATTAAA	-13	NA	37407223	37477228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_37407497_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_77624.known	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	20.5	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	-1	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_37489959_37510676_37510765_37512180
transcript_77631.known	chr17	-	8141	22	FSM	ENSG00000275066.5	ENST00000612223.5	8141	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_16	15.8532098654673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGCTACTAAGCCTTT	-19	True	NA	-19	True	AATACA	-13	NA	37609418	37514806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_77639.nic	chr17	-	456	5	ISM	ENSG00000275066.5	ENST00000619976.1	1375	10	23	13573	3	-64	5prime_fragment	FALSE	canonical	3	92	junction_3	10.8714074525794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTTAGAAGAAGAAAGAAA	-16	True	NA	-4	True	NA	NA	NA	37609415	37585405	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_77640.known	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_12	53.7297185276568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-7	True	NA	-2	True	AATAAA	-35	NA	37643446	37609738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_77649.nic	chr17	-	1711	13	ISM	ENSG00000278053.5	ENST00000617633.5	6383	15	-36	10029	-36	0	5prime_fragment	FALSE	canonical	3	342	junction_10	51.631910352675	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATCTTGAATTTACCT	45	False	NA	-1	True	CATAAA	-22	NA	37643482	37619767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_77653.nic	chr17	-	330	2	ISM	ENSG00000278053.5	ENST00000613633.1	776	6	-49	15302	-36	-11319	5prime_fragment	FALSE	canonical	3	550	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACGATGACTTCAGGT	45	False	NA	61	True	AAGAAA	-5	NA	37643482	37642127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_37642309_37643333
transcript_77654.known	chr17	-	1971	9	FSM	ENSG00000275410.6	ENST00000621123.4	1971	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	9.25928587959136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATTGCCACAATGCCT	1	True	NA	NA	False	NA	NA	NA	37745059	37687171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733744_37739439_37739640_37744540
transcript_77655.known	chr17	-	2790	9	FSM	ENSG00000275410.6	ENST00000617811.5	2790	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	5.25446238924593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTCATATTTCTG	1	True	NA	-5	True	ATTAAA	-20	NA	37745059	37686430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733822_37739439_37739640_37744540
transcript_77673.known	chr17	-	1643	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	0	2	0	multi-exon	FALSE	canonical	1	2	junction_9	145.769488582669	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAATCTGAAACTTTT	153	False	NA	NA	False	NA	NA	NA	38257192	38195702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
transcript_77680.known	chr17	+	1553	8	FSM	ENSG00000278845.5	ENST00000613675.5	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	34.6221587650311	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGCCTTTGATTGTG	-6	True	NA	12	True	TATAAA	-18	NA	38297167	38323211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38320617_38320768_38322125_38322300_38322508
transcript_77682.known	chr17	+	1827	9	FSM	ENSG00000274211.6	ENST00000613678.5	1827	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	7.66383552798467	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCACATGACCGTACTCT	177	False	NA	-99	True	GGGGCT	-6	NA	38352227	38399648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38353033_38361710_38361776_38364751_38364857_38366286_38366418_38367881_38368051_38377713_38377843_38395308_38395445_38395847_38395999_38399512
transcript_77686.known	chr17	-	702	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	0	32	0	multi-exon	FALSE	canonical	3	19	junction_3	10.077477638554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	0	True	NA	NA	False	AATAAA	-33	NA	38452399	38450393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
transcript_77687.nic	chr17	-	925	3	ISM	ENSG00000276170.5	ENST00000617990.5	734	4	299	0	-186	0	3prime_fragment	FALSE	canonical	3	26	junction_2	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1471	False	NA	NA	False	AATAAA	-33	NA	38452132	38450393	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_38450724_38451305_38451394_38451625
transcript_77692.known	chr17	-	419	2	FSM	ENSG00000276170.5	ENST00000622796.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCCCGAGGAACATGG	1657	False	NA	-60	True	NA	NA	NA	38451946	38450625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38450724_38451625
transcript_77695.known	chr17	-	3255	1	FSM	ENSG00000273604.2	ENST00000621654.2	3255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCCTTTCATTTTTCT	-7	True	NA	0	True	CATAAA	-21	NA	38674957	38671702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38671700_38675000
transcript_77697.known	chr17	-	3062	12	FSM	ENSG00000277258.5	ENST00000616199.4	3062	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	40.5839605169292	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	11	True	NA	-4	True	AATAAA	-15	NA	38749817	38733897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195_38748309_38749361
transcript_77698.known	chr17	-	1534	11	FSM	ENSG00000277258.5	ENST00000616129.4	1534	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.3967390020035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	1450	False	NA	-25	True	AATATA	-43	NA	38748378	38735043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
transcript_77701.known	chr17	-	1499	10	FSM	ENSG00000277258.5	ENST00000618941.4	1499	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.9858164339244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGGGTTTTATAAATAAAT	1644	False	NA	-90	True	NA	NA	NA	38748184	38735108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
transcript_77702.nnic	chr17	-	2570	10	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_9	33.8923495500783	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	1463	False	NA	-4	True	AATAAA	-15	NA	38748365	38733897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_77705.nnic	chr17	-	1424	10	NIC	ENSG00000277258.5	novel	1534	11	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	33.8923495500783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	1463	False	NA	-25	True	AATATA	-43	NA	38748365	38735043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_77707.known	chr17	+	2552	4	FSM	ENSG00000277972.2	ENST00000613478.2	2552	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	15.121728296285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGGGAGGAGAGA	-7	True	NA	NA	False	NA	NA	NA	38730340	38735605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38730407_38730759_38730796_38731319_38731440_38733275
transcript_77711.known	chr17	+	2326	3	FSM	ENSG00000277972.2	ENST00000619858.1	2326	3	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTATGTATATTTGGTT	11	True	NA	51	True	TTTAAA	-24	NA	38730358	38735044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38730796_38731319_38731440_38733275
transcript_77713.known	chr17	+	762	6	FSM	ENSG00000277791.5	ENST00000619426.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_5	206.633395171255	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	-25	True	NA	27	True	AATAAA	-16	NA	38752740	38764225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760430_38760609_38762410_38762506_38764118
transcript_77714.known	chr17	+	662	6	FSM	ENSG00000277791.5	ENST00000613870.4	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1095.93185919563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	-2	True	NA	27	True	AATAAA	-16	NA	38752763	38764225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760507_38760609_38762410_38762506_38764118
transcript_77718.known	chr17	+	552	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	1121.77415284896	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	7	True	NA	27	True	AATAAA	-16	NA	38752772	38764225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
transcript_77721.known	chr17	-	5383	10	FSM	ENSG00000276293.5	ENST00000619039.5	5383	10	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_9	13.1740485635797	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	-52	True	NA	-15	True	AATAAA	-20	NA	38799556	38765690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
transcript_77727.known	chr17	-	3067	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	13.9044357430761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	5	True	NA	-8	True	AATAAA	-30	NA	38825321	38800440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_77734.nic	chr17	-	698	5	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-24	10117	10	-204	5prime_fragment	FALSE	canonical	3	82	junction_1	9.85837207656518	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAGAAGAAAAAGAAGC	-19	True	NA	NA	False	AAAAAG	-15	NA	38825345	38810557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_77736.nic	chr17	-	660	4	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-24	12354	10	-2441	5prime_fragment	FALSE	canonical	3	95	junction_3	5.73488351136175	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGTATACCAGATAA	-19	True	NA	NA	False	ATTAAA	-35	NA	38825345	38812794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_38812865_38814860_38815098_38820900_38821074_38825165
transcript_77738.known	chr17	-	625	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	2722.71585002916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTAAATGTTTTCCTT	8	True	NA	NA	False	ATTAAA	-17	NA	38853722	38847864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_77739.known	chr17	-	588	5	FSM	ENSG00000125691.14	ENST00000245857.9	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	3172.46137683345	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	338	False	NA	-25	True	AATAAA	-25	NA	38853428	38850080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853301
transcript_77741.known	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_4	898.178260424956	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	9	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_77744.known	chr17	-	615	4	FSM	ENSG00000125691.14	ENST00000577407.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_3	994.9275797207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAAAAACTA	-7	True	NA	6	True	NA	NA	NA	38853737	38850113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853697
transcript_77746.known	chr17	-	2779	3	FSM	ENSG00000125691.14	ENST00000584912.5	2779	3	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_2	1084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-10	True	NA	-25	True	AATAAA	-25	NA	38853740	38850080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38852733_38853021_38853106_38853697
transcript_77749.known	chr17	+	3492	8	FSM	ENSG00000002834.18	ENST00000435347.7	3492	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	221.563921766544	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGACTTGGTTTCCT	82	False	NA	18	True	AATAAA	-13	NA	38870142	38921761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604_38919983_38920306
transcript_77750.nnic	chr17	+	4339	8	NNC	ENSG00000002834.18	novel	3492	8	NA	NA	-340	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	221.563921766544	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTGGTTTCCTCTCTGG	NA	False	NA	24	True	AATAAA	-19	NA	38869518	38921767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604_38921107_38921213
transcript_77753.known	chr17	+	3910	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_6	57.1792988958611	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	-3	True	NA	27	True	AATAAA	-22	NA	38870057	38921770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
transcript_77760.known	chr17	+	1167	4	FSM	ENSG00000002834.18	ENST00000584106.1	1167	4	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_3	9.39266853573691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCGGGGGCAGGGCACT	0	True	NA	NA	False	NA	NA	NA	38870060	38899200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411
transcript_77762.known	chr17	+	3692	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAGAATTATAAATTA	5791	False	NA	NA	False	AATAAA	-22	NA	38925167	38929384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38925892_38926416
transcript_77763.known	chr17	+	2698	4	FSM	ENSG00000214553.11	ENST00000647826.2	2714	4	0	16	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	76.3675323681471	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCACTCTGCAAAGAAT	5848	False	NA	7	True	AATAAA	-31	NA	39033108	39053199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39033446_39034169_39034242_39044387_39046342_39052864
transcript_77767.known	chr17	-	2859	15	FSM	ENSG00000161381.14	ENST00000578390.5	2859	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.97272713153339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGTCTCTCAACGTAT	1715	False	NA	-1	True	AATAAA	-20	NA	39151519	39067129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079529_39081249_39081450_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
transcript_77769.known	chr17	-	6230	14	FSM	ENSG00000161381.14	ENST00000315392.9	6230	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	4.49193886789429	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGTCACATTTCTGGA	-14	True	NA	NA	False	AATAAA	-13	NA	39151637	39063312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079165_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
transcript_77770.nic	chr17	-	2291	14	NIC	ENSG00000161381.14	novel	2605	14	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	5.12217594294969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGTCTCTCAACGTAT	157	False	NA	-1	True	AATAAA	-20	NA	39153077	39067129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079165_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39152923
transcript_77771.known	chr17	-	2659	14	FSM	ENSG00000161381.14	ENST00000394318.7	2659	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.12333101702976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGTCTCTCAACGTAT	1715	False	NA	-1	True	AATAAA	-20	NA	39151519	39067129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079529_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
transcript_7778.nic	chr1	-	3186	16	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	20	junction_12	19.1724339149265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	6	True	NA	-13	True	AATAAA	-15	NA	41242122	41027201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_77780.nic	chr17	-	2413	13	NIC	ENSG00000161381.14	novel	6230	14	NA	NA	-36	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_7	2.39211668240122	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGTCTCTCAACGTAT	1561	False	NA	-1	True	AATAAA	-20	NA	39151673	39067129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_39067960_39069855_39070017_39077912_39078049_39079103_39079165_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
transcript_77797.known	chr17	+	2777	1	FSM	ENSG00000280177.1	ENST00000623613.1	2777	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGCCTGATTAAAAAAAAT	1	True	NA	NA	False	NA	NA	NA	39165072	39167849	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39165100_39167800
transcript_77804.known	chr17	-	3711	14	FSM	ENSG00000067191.16	ENST00000394303.8	3711	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	25.2164593566426	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGGCATCACTGTGCC	-4	True	NA	NA	False	AATACA	-18	NA	39197669	39173452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_77807.nic	chr17	-	3535	14	NIC	ENSG00000067191.16	novel	3722	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	24.8891031502001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCTCCCAAGCCTGC	-4	True	NA	-12	True	TATAAA	-20	NA	39197706	39173800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185949_39186105_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_77814.known	chr17	-	3722	13	FSM	ENSG00000067191.16	ENST00000622445.4	3722	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	13.2610017218409	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTGTGGCATCACTGT	-1	True	NA	NA	False	AATACA	-15	NA	39197703	39173455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_77815.nnic	chr17	-	3881	13	NIC	ENSG00000067191.16	novel	3722	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	20.3434059750738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCTCCCAAGCCTGC	-4	True	NA	-12	True	TATAAA	-20	NA	39197706	39173800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39192095_39194883_39194971_39197411
transcript_77819.known	chr17	-	1753	13	FSM	ENSG00000067191.16	ENST00000394310.7	1753	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	24.8845947436472	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	0	True	NA	NA	False	NA	NA	NA	39197702	39177135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_77821.known	chr17	-	1889	13	FSM	ENSG00000067191.16	ENST00000344140.5	1889	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	24.540640895371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	-1	True	NA	NA	False	NA	NA	NA	39197703	39177135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185949_39186105_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_77824.nnic	chr17	-	3299	12	NIC	ENSG00000067191.16	novel	3722	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	21.157809257151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCTCCCAAGCCTGC	-4	True	NA	-12	True	TATAAA	-20	NA	39197706	39173800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_77833.known	chr17	+	812	6	FSM	ENSG00000108298.12	ENST00000678012.1	812	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	5557.98778696031	5066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGCAAACTCCACCTCCA	2	True	NA	187	True	NA	NA	NA	39200316	39204840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200350_39201212_39201320_39202316_39202446_39202993_39203110_39204076_39204188_39204524
transcript_77834.known	chr17	+	1051	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_1	5401.4371050675	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTAATCTGCCTTC	-5	True	NA	58	True	AATAAA	-1	NA	39200341	39204711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_77835.known	chr17	+	792	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5873.55610852574	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	-2	True	NA	67	True	AATAAA	-10	NA	39200344	39204720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_77837.known	chr17	+	1247	5	FSM	ENSG00000108298.12	ENST00000577741.2	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	10069	junction_1	1954.85376690943	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	2	True	NA	74	True	AATAAA	-17	NA	39200316	39204727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200350_39201212_39201320_39202316_39203110_39204076_39204188_39204524
transcript_7784.known	chr1	-	3323	16	FSM	ENSG00000010803.16	ENST00000372596.5	3323	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	23.6693895147298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	12	True	NA	-13	True	AATAAA	-15	NA	41242116	41027201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_77841.known	chr17	-	3430	11	FSM	ENSG00000141750.7	ENST00000333461.6	3430	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	1.62480768092719	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCATCTGCTCTGTGTCTC	9	True	NA	-5	True	ATTAAA	-15	NA	39225945	39210540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39212397_39212994_39213133_39213506_39213559_39214232_39214331_39214790_39214862_39214950_39215024_39215117_39215231_39216809_39216901_39217075_39217174_39217866_39218174_39225412
transcript_77842.known	chr17	-	2251	11	FSM	ENSG00000141750.7	ENST00000584501.1	2251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.73205080756888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGAACAAAATCCTGGC	286	False	NA	NA	False	AAGAAA	-42	NA	39225668	39211240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39212397_39212994_39213133_39213506_39213559_39214232_39214331_39214790_39214862_39214950_39215024_39215117_39215231_39216809_39216901_39217075_39217174_39218068_39218174_39225412
transcript_77847.known	chr17	-	10332	15	FSM	ENSG00000108306.13	ENST00000264658.11	10332	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	5.50880556704538	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCATTTTCCTGTGG	4	True	NA	-20	True	ATTAAA	-17	NA	39401626	39252662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39401360
transcript_77848.known	chr17	-	1620	15	FSM	ENSG00000108306.13	ENST00000577399.5	1620	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	8.47445139997937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGAGGTGGTCAACCTT	37	False	NA	NA	False	NA	NA	NA	39402523	39261459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39402172
transcript_77850.known	chr17	-	2870	18	FSM	ENSG00000125686.12	ENST00000394287.7	2870	18	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	8.27134964280285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-7	True	NA	0	True	AATAAA	-20	NA	39451268	39404284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39405309_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_77855.known	chr17	-	8137	17	FSM	ENSG00000125686.12	ENST00000300651.11	8137	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	6.06958349065239	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-2	True	NA	0	True	AATAAA	-20	NA	39451263	39404284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_77857.known	chr17	+	8287	14	FSM	ENSG00000167258.15	ENST00000447079.6	8287	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	15.7829208867046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTCCATTGCAT	-9	True	NA	6	True	ATTAAA	-18	NA	39461485	39534544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530603
transcript_77858.known	chr17	+	5918	14	FSM	ENSG00000167258.15	ENST00000430627.6	5918	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	17.814627325475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCAAACAGAGCATTGT	266	False	NA	NA	False	AAAACA	-5	NA	39461760	39532477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530630
transcript_77862.known	chr17	+	2036	1	FSM	ENSG00000167258.15	ENST00000585161.1	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39548940	39550976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39548900_39551000
transcript_77863.known	chr17	+	1038	8	FSM	ENSG00000131771.14	ENST00000580825.5	1038	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	20.2585330975692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTCTGTGTTTGCTTGT	33	False	NA	NA	False	NA	NA	NA	39626739	39636000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39626941_39627305_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_77864.known	chr17	+	1815	7	FSM	ENSG00000131771.14	ENST00000254079.9	1815	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	8.05018978382222	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGACTCCTCTTTCA	-2	True	NA	14	True	AATAAA	-14	NA	39626951	39636624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_77865.known	chr17	+	1466	5	FSM	ENSG00000131771.14	ENST00000579000.5	1466	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	29.4904645605999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGACTCCTCTTT	246	False	NA	12	True	AATAAA	-12	NA	39627199	39636622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39627474_39629169_39629231_39633882_39634087_39635606_39635727_39635815
transcript_77868.known	chr17	+	1504	7	FSM	ENSG00000131771.14	ENST00000394267.2	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	24.3584345419268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACTCCTCTTTCAGG	-8	True	NA	16	True	AATAAA	-16	NA	39628497	39636626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39628707_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_77884.known	chr17	+	2770	15	FSM	ENSG00000131748.16	ENST00000336308.10	2770	15	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	26.6095157139436	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGCTCAGTAATCAAT	-9	True	NA	17	True	ATTAAA	-18	NA	39637143	39664201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_77886.nic	chr17	+	2177	15	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-47	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_14	96.4444695889076	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	7873	False	NA	32	True	ATTAAA	-27	NA	39637042	39663484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_7789.nic	chr1	-	3176	15	NIC	ENSG00000010803.16	novel	3252	15	NA	NA	-29	0	intron_retention	FALSE	canonical	3	39	junction_11	16.3925069990617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-1	True	NA	-13	True	AATAAA	-15	NA	41242183	41027201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_77904.nic	chr17	+	1992	14	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	95.4569204858352	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	-7	True	NA	32	True	ATTAAA	-27	NA	39637105	39663484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_7791.known	chr1	-	3108	15	FSM	ENSG00000010803.16	ENST00000337495.9	3108	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_11	23.8023322472434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	18	True	NA	-13	True	AATAAA	-15	NA	41242110	41027201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_77916.known	chr17	+	1949	14	FSM	ENSG00000131748.16	ENST00000394250.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	100.81044371557	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTATTAAGCCAAT	-9	True	NA	-18	True	NA	NA	NA	39637143	39663434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_77922.known	chr17	+	2404	14	FSM	ENSG00000131748.16	ENST00000488876.5	2404	14	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	99.3443595537659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	-5	True	NA	32	True	ATTAAA	-27	NA	39653097	39663484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39653159_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_7793.known	chr1	-	3252	15	FSM	ENSG00000010803.16	ENST00000372597.5	3252	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_10	24.8793004692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	12	True	NA	-13	True	AATAAA	-15	NA	41242116	41027201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_7794.nic	chr1	-	3099	14	NIC	ENSG00000010803.16	novel	3252	15	NA	NA	-18	0	intron_retention	FALSE	canonical	3	23	junction_2	21.9644683482775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	138	False	NA	-13	True	AATAAA	-15	NA	41242172	41027201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_77949.known	chr17	+	1989	14	FSM	ENSG00000131748.16	ENST00000580611.5	1989	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	134.230791271764	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	0	True	NA	32	True	ATTAAA	-27	NA	39637152	39663484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39637232_39653480_39653751_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_77950.known	chr17	+	960	2	FSM	ENSG00000173991.6	ENST00000309889.3	960	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATCTCTTTCCTTGTG	0	True	NA	15	True	AATAAA	-20	NA	39665348	39666554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39665470_39665715
transcript_77951.known	chr17	+	821	3	FSM	ENSG00000141744.4	ENST00000394246.1	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	12	False	NA	6	True	AATAAA	-15	NA	39667980	39670473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39668071_39669628_39669837_39669950
transcript_77952.known	chr17	+	958	3	FSM	ENSG00000141744.4	ENST00000269582.3	958	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	11.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGTCAGTGCTGTGTG	-2	True	NA	8	True	AATAAA	-17	NA	39668452	39670475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39668678_39669628_39669837_39669950
transcript_7798.known	chr1	-	363	2	FSM	ENSG00000010803.16	ENST00000488592.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAATTTTCCAGATTG	156	False	NA	NA	False	NA	NA	NA	41242154	41185983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41186251_41242058
transcript_7799.known	chr1	-	3186	14	FSM	ENSG00000010803.16	ENST00000397171.6	3186	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	23.9955617197956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTTTTTAATCAGTTA	7239	False	NA	-11	True	AATAAA	-17	NA	41161481	41027199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363
transcript_77997.known	chr17	+	4557	27	FSM	ENSG00000141736.14	ENST00000269571.10	4557	27	0	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_6	165.202892111882	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCACCGGCCTATGTC	2	True	NA	20	True	AATATA	-13	NA	39700063	39728658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
transcript_78.known	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_6	1152.73999236601	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_7800.known	chr1	-	5225	13	FSM	ENSG00000198815.9	ENST00000361346.6	5225	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	24.7823862181725	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAACACTGATTGGTCT	-20	True	NA	-12	True	AATAAA	-19	NA	42335235	42176547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
transcript_78013.known	chr17	+	4523	27	FSM	ENSG00000141736.14	ENST00000578373.5	4523	27	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	320.859155445401	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTGTATGGGGAGGC	18	False	NA	28	True	AATAAA	-16	NA	39700079	39728577	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39700312_39706989_39707205_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
transcript_78029.known	chr17	+	3730	26	FSM	ENSG00000141736.14	ENST00000584450.5	3730	26	0	0	0	0	multi-exon	TRUE	canonical	1	17	junction_25	310.433518808778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGGCCAAGTCCGCA	2	True	NA	NA	False	NA	NA	NA	39700023	39728044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727688
transcript_7803.known	chr1	-	5106	12	FSM	ENSG00000198815.9	ENST00000361776.5	5106	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	36.4501244201983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACACTGATTGGTCTCCG	0	True	NA	-9	True	AATAAA	-22	NA	42335215	42176544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
transcript_7804.nic	chr1	-	538	3	ISM	ENSG00000198815.9	ENST00000445886.5	1326	8	-63	87016	-49	-13491	5prime_fragment	FALSE	canonical	3	175	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTAAGTGAAATTTAT	596	False	NA	NA	False	AAAAAG	-5	NA	42335284	42278421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_42278673_42311049_42311111_42335058
transcript_7805.nnic	chr1	+	1317	5	NNC	ENSG00000177181.15	novel	10577	5	NA	NA	-35	4888	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	25.1731503789256	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTCATTTGCACAGAAA	NA	False	NA	12	True	AATAAA	-14	NA	42380756	42415053	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410072_42414483
transcript_7807.known	chr1	+	10577	5	FSM	ENSG00000177181.15	ENST00000431473.4	10577	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	11.9660979437743	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTTTGCAATTTACT	-10	True	NA	NA	False	ATTAAA	-19	NA	42380791	42424232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410188_42414483
transcript_781.known	chr1	-	1057	6	FSM	ENSG00000160087.21	ENST00000400929.6	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	212.684367079482	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGGGCCTTGTGTGCT	-11	True	NA	-108	True	GGGGCT	-4	NA	1273855	1254984	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1273665
transcript_7812.known	chr1	+	966	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	302.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGATATGATGTCA	14	False	NA	NA	False	NA	NA	NA	42456116	42460081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42456500_42457246_42457351_42459602
transcript_78127.known	chr17	+	1316	8	FSM	ENSG00000141736.14	ENST00000584908.5	1316	8	0	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_6	92.3436350745167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGGCATGGAGCACTTG	165	False	NA	NA	False	NA	NA	NA	39700226	39712330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927
transcript_7814.known	chr1	+	984	3	FSM	ENSG00000127125.9	ENST00000372556.3	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	236.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTTTTGTTTGAAA	13	True	NA	40	True	AATAAA	-33	NA	42456560	42460414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42456629_42457246_42457351_42459602
transcript_78142.known	chr17	-	1397	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	22.6421435969889	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCTGTACAAAGCCTGG	0	True	NA	NA	False	AGTAAA	-15	NA	39730532	39728509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
transcript_78143.known	chr17	-	706	3	FSM	ENSG00000141741.12	ENST00000474210.1	706	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	0	True	NA	-6	True	AGTAAA	-20	NA	39730532	39729155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729606_39729684_39729762_39730353
transcript_78144.known	chr17	-	806	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_2	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTAACTAGTGTGTGTT	-4	True	NA	-8	True	AGTAAA	-18	NA	39730510	39729157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729762_39730193_39730292_39730406
transcript_78145.known	chr17	-	2687	8	FSM	ENSG00000161395.14	ENST00000300658.9	2687	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	23.8353193597147	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-19	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_78146.known	chr17	-	3028	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	16.8498269031663	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-19	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_78147.known	chr17	-	2220	4	FSM	ENSG00000161395.14	ENST00000579146.5	2220	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	66.0504857413378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-19	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39684596_39684750_39685921_39686020_39687833
transcript_78148.known	chr17	-	2533	7	FSM	ENSG00000161395.14	ENST00000378011.8	2533	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	49.5232829642337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-19	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39685921_39686020_39687833
transcript_78149.known	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	594	junction_1	23.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	41	False	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729606_39729684_39729762_39730193
transcript_78150.known	chr17	-	925	2	FSM	ENSG00000141741.12	ENST00000498164.2	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCTAACTAGTGTGTG	16	False	NA	-10	True	AGTAAA	-16	NA	39730516	39729159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729762_39730193
transcript_78158.known	chr17	+	2233	15	FSM	ENSG00000141738.14	ENST00000309156.9	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	37.0427910307382	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	0	True	NA	24	True	AATAAA	-18	NA	39737937	39747285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_78165.known	chr17	+	2093	15	FSM	ENSG00000141738.14	ENST00000394211.7	2093	15	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	28.7473157575678	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	-3	True	NA	24	True	AATAAA	-18	NA	39738336	39747285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_78172.known	chr17	+	1955	15	FSM	ENSG00000141738.14	ENST00000394209.6	1955	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	49.3075003608653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGATGAGGAGCGGGA	1208	False	NA	NA	False	NA	NA	NA	39739966	39746988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39740182_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_78178.nic	chr17	+	2194	14	NIC	ENSG00000141738.14	novel	2233	15	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	50.820370513915	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	NA	False	NA	24	True	AATAAA	-18	NA	39737888	39747285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_7818.known	chr1	+	2269	3	FSM	ENSG00000127125.9	ENST00000372561.4	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	56.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGACTGAAATACTTC	-5	True	NA	11	True	AATAAA	-26	NA	42456542	42461236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42457074_42457246_42457351_42459602
transcript_78188.nic	chr17	+	2149	14	NIC	ENSG00000141738.14	novel	2093	15	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	45.4048194923853	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	231	False	NA	24	True	AATAAA	-18	NA	39738192	39747285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_7820.known	chr1	+	641	3	FSM	ENSG00000127125.9	ENST00000471420.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTATCACTGTATA	253	False	NA	5	True	ATTAAA	-20	NA	42456800	42473385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42457074_42457246_42457351_42473121
transcript_7821.nic	chr1	+	1692	3	NIC	ENSG00000127125.9	novel	2269	3	NA	NA	-40	-14	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	230	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACACAATGGAAAGGATGT	396	False	NA	24	True	AATAAA	-17	NA	42456498	42460398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_42457074_42457246_42457568_42459602
transcript_7822.known	chr1	+	793	2	FSM	ENSG00000127125.9	ENST00000372560.3	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGTGAGGGAGCTGGAC	-9	True	NA	NA	False	NA	NA	NA	42456538	42457504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42457074_42457246
transcript_78232.known	chr17	+	879	3	FSM	ENSG00000141738.14	ENST00000485182.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	67	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCAGGTGCATGGAAC	11	True	NA	NA	False	GGGGCT	-30	NA	39737948	39743054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39738134_39742251_39742457_39742565
transcript_78238.known	chr17	-	958	7	FSM	ENSG00000073605.19	ENST00000522564.5	958	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.0867789130417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAAAGCCCTTTCTCCC	9661	False	NA	NA	False	NA	NA	NA	39917316	39904811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39912325_39912498_39917081
transcript_78239.known	chr17	-	1100	7	FSM	ENSG00000073605.19	ENST00000524039.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	9.30352382463524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAAAGCCCTTTCTCCC	9661	False	NA	NA	False	NA	NA	NA	39917316	39904811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39909755_39909925_39912325_39912498_39917081
transcript_7824.known	chr1	+	923	11	FSM	ENSG00000171960.12	ENST00000372550.6	923	11	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_9	160.326198732459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	NA	False	NA	29	True	AATAAA	-17	NA	42658334	42676757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675366_42675449_42676583
transcript_78242.known	chr17	-	2106	4	FSM	ENSG00000172057.10	ENST00000579695.5	2106	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	20.1714870272097	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGGCCTTCGCTT	-1	True	NA	-6	True	AATAAA	-22	NA	39927601	39921040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39922686_39923111_39923264_39924029_39924221_39927483
transcript_78243.known	chr17	-	2109	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	15.1070255914995	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCTGGCCTTCGC	-1	True	NA	-8	True	AATAAA	-20	NA	39927601	39921042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
transcript_7825.known	chr1	+	1036	10	FSM	ENSG00000171960.12	ENST00000678333.1	1036	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	126.155107352462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCCTGTAATCCCAGC	7	True	NA	NA	False	NA	NA	NA	42658435	42676202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675732
transcript_7826.known	chr1	+	754	10	FSM	ENSG00000171960.12	ENST00000304979.8	754	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	32.540952356176	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	-6	True	NA	30	True	AATAAA	-18	NA	42658422	42676758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_78260.known	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_3	58.5512419499732	7394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	0	True	NA	69	True	AATAAA	-16	NA	39980806	39997959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
transcript_7827.known	chr1	+	849	10	FSM	ENSG00000171960.12	ENST00000677307.1	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	123.369163964436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	18	False	NA	30	True	AATAAA	-18	NA	42658446	42676758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659371_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_7828.nic	chr1	+	916	10	NIC	ENSG00000171960.12	novel	923	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	126.742472443091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	53	False	NA	29	True	AATAAA	-17	NA	42658481	42676757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_42658735_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_7829.known	chr1	+	2315	9	FSM	ENSG00000171960.12	ENST00000678803.1	2315	9	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	31.693847983481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTGGATGACATCAAAAA	-3	True	NA	NA	False	NA	NA	NA	42658425	42669179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350
transcript_7833.known	chr1	+	806	9	FSM	ENSG00000171960.12	ENST00000677356.1	806	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_8	32.4381623246447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	272	False	NA	29	True	AATAAA	-17	NA	42658700	42676757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_78339.nic	chr17	-	3560	27	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_20	69.0055417549881	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	181	False	NA	-13	True	AATAAA	-17	NA	40054431	40019103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40034915_40034973_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
transcript_78340.nic	chr17	-	3582	27	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_20	69.7933657687136	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	181	False	NA	-13	True	AATAAA	-17	NA	40054431	40019103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40034915_40034973_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
transcript_78349.known	chr17	-	3480	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_25	39.892134563094	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-2	True	NA	-13	True	AATAAA	-17	NA	40054408	40019103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
transcript_78350.nic	chr17	-	3525	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_25	41.4272181059747	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	181	False	NA	-13	True	AATAAA	-17	NA	40054431	40019103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
transcript_78362.known	chr17	-	3446	25	FSM	ENSG00000008838.21	ENST00000356271.7	3446	25	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_22	63.983708321381	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTGCTGTTGGTAT	-1	True	NA	-7	True	AATAAA	-23	NA	40054407	40019097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40053297_40053381_40053468_40053636_40054360
transcript_78363.known	chr17	-	3456	25	FSM	ENSG00000008838.21	ENST00000394127.6	3456	25	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	64.9248363494279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTGACTGTGTGTG	1	True	NA	-17	True	AATAAA	-13	NA	40054405	40019107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40053297_40053381_40053468_40053658_40054360
transcript_78375.known	chr17	+	2538	10	FSM	ENSG00000126351.13	ENST00000264637.8	2538	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	5.18544972870135	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	540	False	NA	21	True	CATAAA	-18	NA	40062809	40093867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093019
transcript_78376.known	chr17	+	2421	10	FSM	ENSG00000126351.13	ENST00000584985.5	2421	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	8.75312995165828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	540	False	NA	21	True	CATAAA	-18	NA	40062809	40093867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093136
transcript_78379.known	chr17	+	5204	9	FSM	ENSG00000126351.13	ENST00000450525.7	5204	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	5.35607132140714	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCGTCTCGTAAAGGAG	-2	True	NA	NA	False	TATAAA	-22	NA	40062964	40093002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205
transcript_78381.known	chr17	-	2630	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	3.39867921524866	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	-6	True	NA	-6	True	NA	NA	NA	40100589	40092792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
transcript_78386.known	chr17	-	604	3	FSM	ENSG00000008838.21	ENST00000580302.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	76	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAATCCTCTCATCTTG	NA	False	NA	NA	False	NA	NA	NA	40054742	40053347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40053381_40053468_40053658_40054360
transcript_78387.known	chr17	+	5035	9	FSM	ENSG00000188895.12	ENST00000398532.9	5035	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	23.0583498975967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAGGTACTCACTTCCA	-6	True	NA	NA	False	AATAAA	-29	NA	40121970	40136917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40123381_40126182_40126407_40129244_40129628_40131536_40131585_40132033_40132099_40133041_40133110_40133533_40133659_40133826_40133900_40134278
transcript_78390.known	chr17	+	2081	3	FSM	ENSG00000188895.12	ENST00000577454.5	2081	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTCAAACAATAAGGA	258	False	NA	NA	False	AATAAA	-14	NA	40122572	40130293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40123381_40126182_40126407_40129244
transcript_78391.known	chr17	+	962	2	FSM	ENSG00000188895.12	ENST00000578826.1	962	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGACTGTAAAAGTCTGT	354	False	NA	NA	False	AAAAAG	-40	NA	40123096	40126860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40123381_40126182
transcript_78393.known	chr17	+	3890	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_13	71.3226687450987	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	11	True	NA	18	True	AATAAA	-19	NA	40140536	40172171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
transcript_78394.nnic	chr17	+	3996	14	NNC	ENSG00000108349.17	novel	3890	14	NA	NA	-20	0	intron_retention	FALSE	canonical	3	18	junction_10	159.288543959339	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTCCCTTGCCAG	2	True	NA	11	True	AATAAA	-12	NA	40140297	40172164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168328_40168418_40169323_40169447_40169597_40169663_40170446
transcript_78395.nic	chr17	+	2419	13	ISM	ENSG00000108349.17	ENST00000264645.12	3890	14	-184	2439	35	353	5prime_fragment	FALSE	canonical	3	487	junction_12	47.8123502176303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAATGCTTTTTTTTTT	15	False	NA	0	True	AATAAA	-12	NA	40140352	40169732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597
transcript_7840.known	chr1	+	2979	8	FSM	ENSG00000065978.19	ENST00000321358.12	2979	8	0	0	0	0	multi-exon	FALSE	canonical	3	2661	junction_1	317.034666230425	3761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGACTTGTGGTT	5	True	NA	NA	False	ATTAAA	-17	NA	42682417	42703805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_78401.known	chr17	+	580	4	FSM	ENSG00000108349.17	ENST00000581849.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_3	31.0519278342299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTGGGTAAAAAGGGC	11	True	NA	NA	False	NA	NA	NA	40140536	40162023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752
transcript_78404.known	chr17	+	3163	8	FSM	ENSG00000171475.14	ENST00000582781.5	3163	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	25.1988013968271	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATCACACACATCAC	-19	True	NA	NA	False	NA	NA	NA	40219325	40279869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219493_40256390_40256523_40260534_40260628_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_78408.known	chr17	+	7492	8	FSM	ENSG00000171475.14	ENST00000323571.9	7492	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	6.5993196928292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTCCTGACTTGAAA	6	True	NA	21	True	AATAAA	-21	NA	40219303	40284136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_78410.known	chr17	+	2693	8	FSM	ENSG00000171475.14	ENST00000585043.5	2693	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.2180806906616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTCCTTTCTCTACCA	4	True	NA	NA	False	NA	NA	NA	40219348	40279357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219518_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_78413.known	chr17	+	1529	8	FSM	ENSG00000171475.14	ENST00000583130.5	1529	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.5382865837286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCCCGTTCCTCAGG	117	False	NA	NA	False	NA	NA	NA	40219789	40278231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219921_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_78429.known	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_11	66.7073291969859	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	-24	True	NA	8	True	AATAAA	-19	NA	40287878	40304657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_78440.known	chr17	+	1948	12	FSM	ENSG00000094804.12	ENST00000649662.1	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	240.022106419904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTATCTCTAG	30	True	NA	-72	True	CATAAA	-41	NA	40287932	40302236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40287950_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_7845.nic	chr1	+	969	7	ISM	ENSG00000065978.19	ENST00000321358.12	2979	8	-24	2968	-24	-1512	5prime_fragment	FALSE	canonical	3	2661	junction_1	275.524348591312	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGGAGATGAGACCCAAG	-19	True	NA	NA	False	GATAAA	-6	NA	42682393	42700837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780
transcript_78453.known	chr17	+	3275	9	FSM	ENSG00000131759.18	ENST00000254066.10	3275	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	18.3059928711884	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCCTCCAGCCTTGCT	6	True	NA	6	True	AATAAA	-16	NA	40309179	40357643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40309287_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_78455.known	chr17	+	2024	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	15.1801679832603	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTACTGGGGACCTTC	14	True	NA	NA	False	NA	NA	NA	40318280	40356331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_7846.nic	chr1	+	1148	7	ISM	ENSG00000065978.19	ENST00000321358.12	2979	8	6	2759	6	-1303	5prime_fragment	FALSE	canonical	3	2661	junction_1	275.524348591312	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAAGCTTGGATGGCC	11	True	NA	NA	False	AGTAAA	-31	NA	42682423	42701046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780
transcript_78461.known	chr17	+	2285	8	FSM	ENSG00000131759.18	ENST00000394081.7	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13.0540477732122	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	-13	True	NA	26	True	NA	NA	NA	40342362	40356795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40342868_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_78467.known	chr17	+	3041	7	FSM	ENSG00000131759.18	ENST00000425707.7	3041	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	27.1416039810964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCCTCCAGCCTTGCT	18	True	NA	6	True	AATAAA	-16	NA	40318284	40357643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40318449_40330856_40331397_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_78473.known	chr17	-	5695	35	FSM	ENSG00000131747.15	ENST00000423485.6	5695	35	0	0	0	0	multi-exon	TRUE	canonical	1	375	junction_4	170.132952285227	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAGAATGCCTCTTTTA	-2	True	NA	-5	True	AATAAA	-19	NA	40417896	40388524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_78476.nic	chr17	-	4056	30	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-90	4163	-90	-3126	5prime_fragment	FALSE	canonical	3	914	junction_20	113.168999086941	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAGAGAAATCCCTG	NA	False	NA	-103	True	AAGAAA	-34	NA	40417986	40392687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_78477.nic	chr17	-	3976	29	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-90	6954	-90	904	5prime_fragment	FALSE	canonical	3	914	junction_19	113.207435574647	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTAGAAAAGAAACAGAAA	NA	False	NA	NA	False	AAAACA	-3	NA	40417986	40395478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_78479.nic	chr17	-	3910	28	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-90	7763	-90	95	5prime_fragment	FALSE	canonical	3	914	junction_18	115.246964497069	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTAATACTCTTGTGG	NA	False	NA	NA	False	AATAAA	-8	NA	40417986	40396287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_78481.nic	chr17	-	3618	26	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-90	10278	-90	-2420	5prime_fragment	FALSE	canonical	3	914	junction_16	116.819149115203	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAACTCTGCAGGCTAAG	NA	False	NA	-30	True	AAGAAA	-1	NA	40417986	40398802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_78483.nic	chr17	-	3294	24	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-2	11356	-2	-3498	5prime_fragment	FALSE	canonical	3	914	junction_14	121.528280138188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATTGGTATGTTTTGG	-4	True	NA	NA	False	AATAGA	-9	NA	40417898	40399880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_78486.nic	chr17	-	1962	15	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-36	18081	-36	6874	5prime_fragment	FALSE	canonical	3	914	junction_5	136.266395755685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAGTCAAATATTACAA	NA	False	NA	NA	False	CATAAA	-4	NA	40417932	40406605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_78491.nic	chr17	-	257	2	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-90	28330	-90	-3375	5prime_fragment	FALSE	canonical	3	1317	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATGCTAAGAAAAGAC	NA	False	NA	-33	True	AATAAA	-7	NA	40417986	40416854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40416896_40417770
transcript_78492.known	chr17	+	2205	4	FSM	ENSG00000141753.7	ENST00000269593.5	2205	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	1.24721912892465	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGTTTGGTTGAT	1	True	NA	34	True	AAAACA	-23	NA	40443449	40457725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40444085_40452984_40453143_40453927_40454063_40456448
transcript_78493.known	chr17	-	4087	13	FSM	ENSG00000131746.13	ENST00000254051.11	4087	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	0.687184270936277	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTTCTGAGGCAGTC	-1	True	NA	NA	False	AATAAA	-19	NA	40501623	40475833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40477730_40478306_40478334_40478579_40478649_40479673_40479843_40480699_40480769_40482128_40482207_40482323_40482417_40484483_40484610_40484920_40485008_40487035_40487461_40488545_40488970_40495986_40496521_40501533
transcript_78494.known	chr17	-	2491	12	FSM	ENSG00000073584.20	ENST00000647294.1	2491	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	474.124700268778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTCCAAATGTAATAAAAA	-10	True	NA	-37	True	AATAGA	-44	NA	40647844	40627744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40639980_40640079_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_78495.known	chr17	-	2488	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	451.564973862937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAAAAGGTCTCAG	-3	True	NA	-14	True	AATAAA	-6	NA	40647837	40627721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_78497.known	chr17	-	5150	11	FSM	ENSG00000073584.20	ENST00000348513.12	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_2	90.2576312563098	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTTAAGAGCCTGA	16	True	NA	-1	True	ATTAAA	-18	NA	40647818	40624961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_78509.nic	chr17	-	1311	6	ISM	ENSG00000073584.20	ENST00000447024.6	1973	11	-841	6953	-29	0	5prime_fragment	FALSE	canonical	3	1197	junction_4	42.7017564041574	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGAAGCAGAAAAGGTAGGG	NA	False	NA	-9	True	AAGAAA	-22	NA	40648683	40636408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_7851.known	chr1	+	1524	7	FSM	ENSG00000065978.19	ENST00000436427.1	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1239.76755213763	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGTAAATTTGTC	-10	True	NA	-6	True	AATAAA	-14	NA	42682986	42702349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42683366_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_78510.known	chr17	-	2156	4	FSM	ENSG00000073584.20	ENST00000474246.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_2	25.8499946271217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCCTAGTTATGCAT	-12	True	NA	-5	True	AATAAA	-16	NA	40647846	40640573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40642560_40645575_40645620_40645795_40645848_40647772
transcript_78511.known	chr17	+	854	3	FSM	ENSG00000167920.11	ENST00000436612.5	854	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	49.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTTTCATGACTTCT	NA	False	NA	13	True	AATAAA	-15	NA	40819105	40835085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40819171_40833114_40833200_40834381
transcript_78512.known	chr17	+	2070	3	FSM	ENSG00000167920.11	ENST00000301665.8	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	17	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTGTGGTTT	NA	False	NA	10	True	ATTAAA	-15	NA	40819112	40836270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40819209_40833114_40833200_40834381
transcript_78513.nnic	chr17	-	635	3	NNC	ENSG00000186395.9	novel	2143	8	NA	NA	3493	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	698.5	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	3492	False	NA	-4	True	AATAAA	-22	NA	40819121	40818116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_40818483_40818786_40818989_40819054
transcript_78514.known	chr17	-	2163	8	FSM	ENSG00000186395.9	ENST00000635956.2	2163	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.4436582317338	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	-1	True	NA	-4	True	AATAAA	-22	NA	40822614	40818116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40818483_40818766_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_78515.known	chr17	-	2143	8	FSM	ENSG00000186395.9	ENST00000269576.6	2143	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	488.8481672383	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	-1	True	NA	-4	True	AATAAA	-22	NA	40822614	40818116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40818483_40818786_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_78519.known	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	4345	junction_5	224.824020069031	6740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-2	True	NA	-14	True	AATAAA	-19	NA	41528308	41523616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
transcript_78524.known	chr17	-	1517	8	FSM	ENSG00000128422.18	ENST00000311208.13	1517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.989743318610787	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTGTCCTTGTTCTG	0	True	NA	-2	True	AATAAA	-18	NA	41624575	41619441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965_41621092_41621592_41621755_41622354_41622512_41622949_41623033_41624077
transcript_78525.known	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	4217	junction_1	379.415632548558	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	-2	True	NA	10	True	AATAAA	-17	NA	41688884	41692668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
transcript_78527.known	chr17	+	1428	3	FSM	ENSG00000173812.11	ENST00000482111.1	1428	3	0	0	0	0	multi-exon	FALSE	canonical	3	4217	junction_1	463.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTGTTTTCAGA	8	False	NA	8	True	TTTAAA	-10	NA	41688894	41691622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41689070_41689777_41690190_41690781
transcript_78528.known	chr17	+	1120	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	14	False	NA	16	True	AATAAA	-2	NA	41688900	41691630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41689070_41690087_41690190_41690781
transcript_78529.nic	chr17	+	860	3	ISM	ENSG00000173812.11	ENST00000469308.1	815	4	467	0	467	0	3prime_fragment	FALSE	canonical	3	4738	junction_1	203	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTAGTCTTGAAGTC	413	False	NA	36	True	AATAAA	-14	NA	41689401	41690999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_41689942_41690087_41690190_41690781
transcript_78530.nic	chr17	+	2024	3	NIC	ENSG00000173812.11	novel	2338	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	4738	junction_1	203	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	-2	True	NA	32	True	AATAAA	-18	NA	41688884	41691646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_41689942_41690087_41690190_41690781
transcript_78531.known	chr17	+	2170	2	FSM	ENSG00000173812.11	ENST00000462917.1	2170	2	0	0	0	0	multi-exon	FALSE	canonical	3	5144	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	-2	True	NA	32	True	AATAAA	-18	NA	41688884	41691646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41690190_41690781
transcript_78536.known	chr17	-	3880	10	FSM	ENSG00000173805.16	ENST00000341193.9	3880	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6.84393937530422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCCAGCTGTCTC	-1	True	NA	-1	True	AATAAA	-18	NA	41734644	41722639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732694_41732799_41734165
transcript_78537.known	chr17	-	5683	10	FSM	ENSG00000173805.16	ENST00000393939.6	5683	10	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_4	5.44557811326349	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	-1	True	NA	NA	False	NA	NA	NA	41734644	41720812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
transcript_78542.nnic	chr17	-	3530	10	NIC	ENSG00000173805.16	novel	5683	10	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.51494009523069	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCCAGCCTCCAGCTGT	-3	False	NA	-4	True	AATAAA	-15	NA	41734646	41722642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_41724830_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
transcript_78547.known	chr17	-	3930	11	FSM	ENSG00000173805.16	ENST00000347901.9	3930	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.22772439983706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCCAGCTGTCTC	0	True	NA	-1	True	AATAAA	-18	NA	41734643	41722639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41727761_41727837_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
transcript_78567.known	chr17	-	3298	15	FSM	ENSG00000173801.17	ENST00000393930.5	3298	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	153.215734258887	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	1548	False	NA	-1	True	AATAAA	-19	NA	41785155	41754603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41784946
transcript_7857.known	chr1	+	776	5	FSM	ENSG00000065978.19	ENST00000332220.10	776	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	1300.73467221413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCCACGTAAACATG	27	False	NA	NA	False	NA	NA	NA	42682439	42697262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696641_42696945_42697179
transcript_78570.nic	chr17	-	3636	15	NIC	ENSG00000173801.17	novel	3298	15	NA	NA	-240	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_14	146.033491406064	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	254	False	NA	-1	True	AATAAA	-19	NA	41786449	41754603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41785902
transcript_78575.known	chr17	-	3200	15	FSM	ENSG00000173801.17	ENST00000310706.9	3200	15	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	70.2251481206799	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	5	True	NA	-1	True	AATAAA	-19	NA	41786698	41754603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
transcript_78599.nnic	chr17	-	3584	14	NNC	ENSG00000173801.17	novel	3505	14	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_13	154.269417754907	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGAGGCTGTTTAGGGG	NA	False	NA	-6	True	AATAAA	-14	NA	41786768	41754608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786565
transcript_78600.known	chr17	-	3505	14	FSM	ENSG00000173801.17	ENST00000393931.8	3505	14	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_13	44.6913146983556	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGAGGCTGTTTAGGGG	-8	True	NA	-6	True	AATAAA	-14	NA	41786711	41754608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
transcript_7861.known	chr1	-	1586	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	7.03957069398096	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATCATTCGGTCTG	141	False	NA	-10	True	NA	NA	NA	42740140	42734994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
transcript_78617.known	chr17	-	2791	9	FSM	ENSG00000141696.13	ENST00000355468.7	2791	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	51.8067321880082	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCCGTGGTCGTCTCCCT	6969	False	NA	-3	True	AATAAA	-24	NA	41812603	41801946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41809705_41809835_41810862_41811035_41811131_41811285_41811453_41812143_41812363
transcript_78630.known	chr17	-	2352	8	FSM	ENSG00000141696.13	ENST00000393928.6	2352	8	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	12.1117247967009	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATAGTACCCGTGGTCGT	12	True	NA	-9	True	AATAAA	-18	NA	41811949	41801952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41809705_41809835_41810862_41811035_41811131_41811285_41811453
transcript_78681.known	chr17	+	2585	10	FSM	ENSG00000141756.19	ENST00000321562.9	2585	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	17.1658575861116	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	7	True	NA	13	True	AATAAA	-13	NA	41813003	41823213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_78682.known	chr17	+	2826	9	FSM	ENSG00000141756.19	ENST00000489591.5	2826	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	48.6415460280612	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCTTAGGGTGTCTTT	-8	True	NA	11	True	AATAAA	-11	NA	41812988	41823211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41813280_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41820050_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_78691.known	chr17	-	1573	9	FSM	ENSG00000141698.17	ENST00000469698.5	1573	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	250.396186073191	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	21	True	NA	-1	True	AATATA	-40	NA	41836202	41825180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587_41835683_41835858
transcript_78692.nic	chr17	-	1426	9	NIC	ENSG00000141698.17	novel	1534	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	209.285689907361	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	-1	True	NA	-1	True	AATATA	-40	NA	41836271	41825180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836078
transcript_78693.known	chr17	-	1408	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	162.772655873153	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTGATTGTGTCTG	-9	True	NA	NA	False	NA	NA	NA	41836232	41825056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_78694.known	chr17	-	1729	8	FSM	ENSG00000141698.17	ENST00000470690.5	1729	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	201.718130274977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-5	True	NA	-47	True	TTTAAA	-17	NA	41836228	41825226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587
transcript_78695.known	chr17	-	1534	8	FSM	ENSG00000141698.17	ENST00000523903.5	1534	8	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	52.9296799575452	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	12	False	NA	-1	True	AATATA	-40	NA	41836258	41825180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
transcript_78698.known	chr17	-	730	8	FSM	ENSG00000141698.17	ENST00000415460.5	730	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	235.707359205591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGGCGGGAGCGCTAC	-18	True	NA	NA	False	NA	NA	NA	41836241	41825653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_78702.known	chr17	-	1253	7	FSM	ENSG00000141698.17	ENST00000393910.5	1253	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	233.909289160468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTTCAAACAAATATAAT	26	True	NA	-58	True	TTTAAA	-6	NA	41836197	41825237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
transcript_78704.nic	chr17	-	1354	7	NIC	ENSG00000141698.17	novel	993	7	NA	NA	-38	0	intron_retention	FALSE	canonical	3	19	junction_1	228.602760749345	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAATGAAAAAAAAG	NA	False	NA	-20	True	AATATA	-21	NA	41836298	41825199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_41825658_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
transcript_78715.known	chr17	-	4293	29	FSM	ENSG00000131473.17	ENST00000352035.7	4293	29	0	0	0	0	multi-exon	TRUE	canonical	3	942	junction_16	268.646399110619	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGCTCCTGGCATC	1	True	NA	-37	True	AATAAA	-23	NA	41918951	41866917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_7873.known	chr1	-	2591	15	FSM	ENSG00000117385.16	ENST00000296388.10	2591	15	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_8	40.8918434060248	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	-17	True	NA	-21	True	AATAAA	-20	NA	42767028	42746373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_78730.known	chr17	-	3682	28	FSM	ENSG00000131473.17	ENST00000393896.6	3682	28	0	0	0	0	multi-exon	TRUE	canonical	3	482	junction_27	353.414413400828	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTCTGCTACCTGCT	NA	False	NA	-13	True	AATAAA	-20	NA	41919022	41867573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_7875.known	chr1	-	2813	15	FSM	ENSG00000117385.16	ENST00000495874.5	2813	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	152.609144615938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTTTGTTCAGACAAT	-11	True	NA	-22	True	AATAAA	-19	NA	42767022	42746374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42756400_42756456_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_78767.known	chr17	-	1876	15	FSM	ENSG00000168259.17	ENST00000586335.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	267.531154012663	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	7	True	NA	38	True	ATTAAA	-20	NA	42017431	41976456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_78770.known	chr17	-	1774	14	FSM	ENSG00000168259.17	ENST00000426588.7	1774	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	203.049881649485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGAG	5	True	NA	16	True	NA	NA	NA	42017151	41976478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
transcript_78771.known	chr17	-	1729	14	FSM	ENSG00000168259.17	ENST00000674166.1	1729	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_13	197.389112005859	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-6	True	NA	-28	True	NA	NA	NA	42017162	41976522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017051
transcript_78772.known	chr17	-	1719	14	FSM	ENSG00000168259.17	ENST00000674233.1	1719	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	218.540397467937	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	7	True	NA	-28	True	NA	NA	NA	42017431	41976522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982245_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_78773.known	chr17	-	1692	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_13	176.499962284388	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGGGGGTGGACAGGGA	-16	True	NA	-43	True	NA	NA	NA	42018526	41976537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_78780.known	chr17	-	1658	13	FSM	ENSG00000168259.17	ENST00000674306.1	1658	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	223.82103155572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAGAATAAA	-5	True	NA	22	True	ATTAAA	-4	NA	42017443	41976472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41997114_41997240_42000481_42000571_42017339
transcript_78787.known	chr17	-	2243	9	FSM	ENSG00000168259.17	ENST00000590847.2	2243	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_8	201.315944164887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATCTATAATAGCAAAA	16	True	NA	NA	False	NA	NA	NA	42018494	41986565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_78789.known	chr17	-	1572	9	FSM	ENSG00000187595.17	ENST00000436535.5	2893	9	0	1321	0	-1272	multi-exon	FALSE	canonical	0	0	junction_1	8.01463505095522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCATGGGGAGGCCAGAG	9343	False	NA	NA	False	NA	NA	NA	42098479	42026896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42027134_42027632_42027729_42028049_42028247_42028782_42029077_42031618_42031785_42034224_42034336_42037736_42037886_42062806_42063059_42098409
transcript_78790.known	chr17	-	3295	8	FSM	ENSG00000168259.17	ENST00000674337.1	3295	8	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_7	91.6630920762528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTATAATAGCAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	42017622	41986560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_78807.known	chr17	+	997	5	FSM	ENSG00000168256.18	ENST00000485789.5	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	122.336370307444	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCATCAGCGACACACA	6	False	NA	NA	False	NA	NA	NA	42020077	42024265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022564_42022641_42023653
transcript_78811.known	chr17	+	2583	4	FSM	ENSG00000173786.17	ENST00000393888.1	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	186.541029147894	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGTCTCTCTTACC	-4	True	NA	17	True	AATAAA	-17	NA	41966814	41975176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41966888_41968072_41968741_41971891_41972032_41973474
transcript_78818.known	chr17	+	1041	4	FSM	ENSG00000168256.18	ENST00000491638.5	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	147.822716642455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTCTGAGTTCCTATT	-15	True	NA	NA	False	NA	NA	NA	42020103	42024220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021563_42021672_42022375_42022641_42023653
transcript_78820.known	chr17	+	1461	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	129.213862345424	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGATGGGCCTCACT	-13	True	NA	NA	False	NA	NA	NA	42020105	42024833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
transcript_78822.known	chr17	+	1598	4	FSM	ENSG00000168256.18	ENST00000393881.7	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	147.420034821142	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	-22	True	NA	NA	False	NA	NA	NA	42020096	42024774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021544_42021672_42022398_42022641_42023653
transcript_78825.known	chr17	+	1644	4	FSM	ENSG00000168256.18	ENST00000393880.5	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	143.208472747483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	-22	True	NA	NA	False	NA	NA	NA	42020096	42024774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020270_42021563_42021672_42022398_42022641_42023653
transcript_78827.known	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.31245915016974	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-4	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
transcript_78830.known	chr17	+	1019	3	FSM	ENSG00000173786.17	ENST00000472031.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	203	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGTTAGCTCAGCCCC	-3	True	NA	NA	False	NA	NA	NA	41966762	41974228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41966888_41971891_41972032_41973474
transcript_78832.known	chr17	-	3733	3	FSM	ENSG00000267221.3	ENST00000587304.3	3733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCCATGGTGGTGT	-2	True	NA	1	True	AATAAA	-20	NA	42050601	42038231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42041190_42042833_42043564_42050556
transcript_78839.nic	chr17	-	1393	6	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	10.8921990433521	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	4851	False	NA	0	True	AATAAA	-21	NA	42107853	42101403	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42107603
transcript_78848.nic	chr17	-	1779	7	NIC	ENSG00000108774.15	novel	1640	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_5	340.028634415136	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-23	True	NA	-8	True	AATATA	-23	NA	42155011	42124978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42137761_42137879_42154892
transcript_78849.known	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	52.681685622235	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-1	True	NA	-8	True	AATATA	-23	NA	42154989	42124978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
transcript_78857.known	chr17	-	608	3	FSM	ENSG00000108774.15	ENST00000546881.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	385.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGGTGGGGGGTGGGC	-4	True	NA	NA	False	NA	NA	NA	42154992	42128550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42128801_42130336_42130591_42154888
transcript_78861.known	chr17	-	555	2	FSM	ENSG00000108774.15	ENST00000550013.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTCAAGCATCGCTAGT	NA	False	NA	NA	False	NA	NA	NA	42155017	42130160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42130591_42154892
transcript_78862.known	chr17	-	3115	18	FSM	ENSG00000108773.11	ENST00000225916.10	3115	18	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_12	30.9554876319672	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTTCTTTGGTGTAG	-13	True	NA	-2	True	AATAAA	-19	NA	42121367	42113110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119244_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
transcript_78863.known	chr17	-	2990	18	FSM	ENSG00000108773.11	ENST00000465682.5	2990	18	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_12	23.640619550544	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGATTGTTTCTTT	-10	True	NA	-9	True	AATAAA	-12	NA	42121058	42113117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119053_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
transcript_78864.known	chr17	-	3788	17	FSM	ENSG00000089558.9	ENST00000264661.4	3788	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.60917464655056	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGGCTCTGGGTGTTT	-3	True	NA	NA	False	AATAAA	-16	NA	42181142	42156890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42157119_42159730_42160436_42162247_42162322_42163227_42163335_42163605_42163959_42164129_42164169_42165448_42165694_42166296_42166547_42169476_42169677_42170106_42170302_42171787_42171996_42175578_42175737_42176053_42176298_42178099_42178228_42178330_42178478_42178792_42179027_42180869
transcript_78865.known	chr17	-	2408	10	FSM	ENSG00000167925.16	ENST00000587427.6	2408	10	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_9	3.76468318802165	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-14	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42189922_42190184_42190271_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_78866.known	chr17	-	2496	10	FSM	ENSG00000167925.16	ENST00000414034.7	2496	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.17241973881384	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGCCTCAGGGTCTGC	-14	True	NA	-1	True	AATAAA	-15	NA	42194494	42189087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42189922_42190184_42190360_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_78878.known	chr17	-	592	3	FSM	ENSG00000167925.16	ENST00000585375.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTTTCTTGTCCAAG	-14	True	NA	NA	False	NA	NA	NA	42194494	42193188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42193595_42193766_42193851_42194392
transcript_7888.known	chr1	-	2726	14	FSM	ENSG00000117385.16	ENST00000460031.5	2726	14	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_10	28.888072106999	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	22	True	NA	-21	True	AATAAA	-20	NA	42766989	42746373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_78881.known	chr17	-	5079	19	FSM	ENSG00000173757.10	ENST00000293328.8	5079	19	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_11	19.1827629673551	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATTGAGTCCTGTTTTT	1	True	NA	-10	True	AATAAA	-18	NA	42276391	42199176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42201865_42202339_42202448_42202756_42202809_42207557_42207729_42210170_42210302_42210402_42210498_42211983_42212191_42216013_42216107_42217159_42217283_42217376_42217465_42218150_42218331_42218722_42218879_42219311_42219464_42219711_42219843_42223381_42223557_42224778_42224869_42227528_42227686_42231999_42232138_42276247
transcript_78902.known	chr17	-	1799	9	FSM	ENSG00000173757.10	ENST00000468312.1	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	14.9916643505649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTTAGGAACTGTTTT	-14	True	NA	NA	False	NA	NA	NA	42276406	42217689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42218331_42218722_42218879_42219311_42219464_42219711_42219843_42223381_42223557_42224778_42224869_42227528_42227686_42231999_42232138_42276247
transcript_78908.nic	chr17	-	1010	4	ISM	ENSG00000173757.10	ENST00000468312.1	1799	9	-36	6659	-36	-886	5prime_fragment	FALSE	canonical	3	202	junction_2	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAGAAGATGTGGTCT	-50	True	NA	NA	False	NA	NA	NA	42276442	42224348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_42224869_42227528_42227686_42231999_42232138_42276247
transcript_78909.known	chr17	+	3770	19	FSM	ENSG00000126561.18	ENST00000590949.6	3770	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	39.0689877328443	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGCTATGGCTCCTGG	0	True	NA	NA	False	AATAAA	-17	NA	42288497	42311943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42288599_42289401_42289540_42289865_42290023_42291971_42292062_42295618_42295794_42299750_42299882_42300129_42300282_42300714_42300871_42301274_42301455_42304341_42304430_42304529_42304653_42305609_42305703_42306240_42306448_42307401_42307497_42307592_42307724_42308177_42308334_42309046_42309099_42309376_42309485_42310506
transcript_78910.known	chr17	+	3629	18	FSM	ENSG00000126561.18	ENST00000588868.5	3629	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	40.8750310836575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCTGCTATGGCTCC	45	False	NA	NA	False	AATAAA	-14	NA	42288542	42311940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42288599_42289401_42289540_42289865_42290023_42291971_42292062_42295618_42295794_42299750_42299882_42300129_42300282_42300714_42300871_42301274_42301455_42304341_42304430_42304529_42304653_42306240_42306448_42307401_42307497_42307592_42307724_42308177_42308334_42309046_42309099_42309376_42309485_42310506
transcript_78912.known	chr17	-	3319	24	FSM	ENSG00000168610.16	ENST00000585517.5	3319	24	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	148.035222907158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTTCAGTTAACAGC	-28	True	NA	NA	False	NA	NA	NA	42388439	42314853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348521_42388278
transcript_78913.known	chr17	-	4782	24	FSM	ENSG00000168610.16	ENST00000679185.1	4782	24	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	145.092174600958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGCATTCAAATTCCA	-11	True	NA	-92	True	NA	NA	NA	42388503	42313470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_78915.known	chr17	-	2633	24	FSM	ENSG00000168610.16	ENST00000404395.3	2633	24	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	122.695605953216	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGATCTGCTTTTAT	-3	True	NA	-22	True	AATAGA	-13	NA	42388414	42315558	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_78916.known	chr17	-	4890	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	110.018506777943	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-19	True	NA	-42	True	NA	NA	NA	42388511	42313420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_78927.known	chr17	-	2615	23	FSM	ENSG00000168610.16	ENST00000389272.7	2615	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_22	121.175543723534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAAATGTCTTGTGT	-20	True	NA	69	True	NA	NA	NA	42388431	42315467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42388278
transcript_78930.known	chr17	-	3288	23	FSM	ENSG00000168610.16	ENST00000678535.1	3288	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.857283771872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGGGCGACAGTCTGA	8	True	NA	NA	False	NA	NA	NA	42388484	42314902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_78934.known	chr17	-	5054	23	FSM	ENSG00000168610.16	ENST00000678764.1	5054	23	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_22	71.6406320832616	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	123	False	42388492	-42	True	NA	NA	NA	42388454	42313420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_78941.known	chr17	-	4800	24	FSM	ENSG00000168610.16	ENST00000678827.1	4800	24	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	131.553837261779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGCATTCAAATTCCA	37	False	NA	-92	True	NA	NA	NA	42388540	42313470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_78947.nnic	chr17	-	3488	3	NNC	ENSG00000177469.13	novel	3570	2	NA	NA	-83	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTGTGTTTGATTGTAT	NA	False	NA	-4	True	AATAAA	-16	NA	42423339	42402451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_42404374_42404535_42405389_42422626
transcript_78948.nnic	chr17	-	2312	3	NNC	ENSG00000177469.13	novel	3570	2	NA	NA	-83	-1179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATAGGAGAAGGTGGA	NA	False	NA	15	True	NA	NA	NA	42423339	42403627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_42404374_42404535_42405389_42422626
transcript_78949.known	chr17	-	3570	2	FSM	ENSG00000177469.13	ENST00000357037.6	3570	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTGATTGTATTCT	-1	True	NA	-1	True	AATAAA	-19	NA	42423256	42402448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42405389_42422626
transcript_7895.known	chr1	-	2993	14	FSM	ENSG00000117385.16	ENST00000236040.8	2993	14	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	42.2152836957753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTTTGTTCAGACAAT	-1	True	NA	-22	True	AATAAA	-19	NA	42767012	42746374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_78956.known	chr17	+	4110	21	FSM	ENSG00000033627.17	ENST00000264649.10	4110	21	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	46.9270710784298	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGTCACTGTGCCCA	-19	True	NA	24	True	AATAAA	-24	NA	42458879	42522582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_78957.known	chr17	+	3028	21	FSM	ENSG00000033627.17	ENST00000393829.6	3028	21	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_5	30.7318645708327	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGACTTTGAGTTCCCT	1773	False	NA	NA	False	NA	NA	NA	42458843	42521485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_78959.nic	chr17	+	3964	20	NIC	ENSG00000033627.17	novel	4110	21	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_19	66.6462526455145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGAAGCTGCCTGTCACT	1776	False	NA	17	True	AATAAA	-17	NA	42458846	42522575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42521026
transcript_78962.nic	chr17	+	3943	20	NIC	ENSG00000033627.17	novel	4106	22	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_19	56.4849893035353	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGAAGCTGCCTGTCACT	1776	False	NA	17	True	AATAAA	-17	NA	42458846	42522575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42521026
transcript_78967.known	chr17	+	2774	20	FSM	ENSG00000033627.17	ENST00000537728.5	2774	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	63.3306409497211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGAGCCAGTCTGCAT	-21	True	NA	NA	False	NA	NA	NA	42458877	42521394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_78982.known	chr17	+	4652	1	FSM	ENSG00000033627.17	ENST00000592831.1	4652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCCTGTCACTGTG	3571	False	NA	20	True	AATAAA	-20	NA	42517926	42522578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42517900_42522600
transcript_78984.known	chr17	+	1976	11	FSM	ENSG00000068120.15	ENST00000590958.5	1976	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	186.860509471638	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGCTCACCCTGGTT	-3	True	NA	NA	False	NA	NA	NA	42562150	42566037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42562220_42562355_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_78992.nic	chr17	+	2415	10	NIC	ENSG00000068120.15	novel	1976	11	NA	NA	-61	0	intron_retention	FALSE	canonical	3	31	junction_1	154.835396469929	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	8423	False	NA	14	True	ATTAAA	-14	NA	42562072	42566274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42562220_42562355_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_78994.known	chr17	+	2071	10	FSM	ENSG00000068120.15	ENST00000421097.6	2071	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	152.072351201657	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	-7	True	NA	0	True	NA	NA	NA	42562146	42566260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42562220_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_78996.nic	chr17	+	2363	10	NIC	ENSG00000068120.15	novel	1976	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	141.657472468532	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	-17	True	NA	14	True	ATTAAA	-14	NA	42562136	42566274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_79026.known	chr17	+	2475	6	FSM	ENSG00000108784.10	ENST00000225927.7	2475	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	18.0554700852678	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGAGTCCCCTGGGTCT	-11	True	NA	24	True	ATTAAA	-24	NA	42536240	42544449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42536656_42537397_42537546_42538338_42538486_42538669_42538756_42540949_42541207_42543027
transcript_79038.known	chr17	+	1493	4	FSM	ENSG00000108784.10	ENST00000591587.1	1493	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	68.9395870793165	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGAGGAGACACTGTGGAC	278	False	NA	NA	False	NA	NA	NA	42536529	42544161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42536656_42538338_42538486_42538669_42538756_42543027
transcript_79045.known	chr17	-	2313	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCCTGTCCTCTTTTC	19	True	NA	-1	True	AAAACA	-18	NA	42554748	42552435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42552400_42554700
transcript_79046.known	chr17	+	2479	9	FSM	ENSG00000068120.15	ENST00000393818.3	2479	9	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	34.7922405142296	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	-6	True	NA	17	True	ATTAAA	-17	NA	42562147	42566277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_79047.known	chr17	+	2225	7	FSM	ENSG00000068120.15	ENST00000591753.1	2225	7	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	11.5566238822398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	264	False	NA	14	True	ATTAAA	-14	NA	42563306	42566274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_79051.known	chr17	+	2360	8	FSM	ENSG00000108788.12	ENST00000435881.7	2360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	130.492317390562	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACTGCCTGTCA	-4	True	NA	10	True	AATAAA	-23	NA	42567099	42573203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567167_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_79055.known	chr17	+	2586	8	FSM	ENSG00000108788.12	ENST00000246912.8	2586	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	64.3979971801633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567329_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_79057.known	chr17	-	1408	8	FSM	ENSG00000131470.15	ENST00000253789.9	1408	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	158.147696402923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAATATGTAGTGCTGT	2905	False	NA	-23	True	AATAAA	-4	NA	42577831	42572322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573588_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_79058.known	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_7	87.357113654942	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-20	True	NA	-10	True	AATAAA	-17	NA	42577729	42572309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_79061.nic	chr17	-	1245	8	NIC	ENSG00000131470.15	novel	1355	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_4	122.700232024131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-7	True	NA	-10	True	AATAAA	-17	NA	42577716	42572309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460_42577562_42577652
transcript_79064.known	chr17	+	2334	7	FSM	ENSG00000108788.12	ENST00000346833.8	2334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	168.905052223629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_79071.known	chr17	-	1244	7	FSM	ENSG00000131470.15	ENST00000589505.5	1244	7	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	76.9431608396744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	2941	False	NA	NA	False	NA	NA	NA	42577795	42572961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42574211_42577212_42577303_42577460_42577562_42577652
transcript_79074.known	chr17	+	2537	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	179.391192648915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
transcript_79079.known	chr17	+	542	1	FSM	ENSG00000287710.1	ENST00000655617.1	542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGGCGCGCTTCTGT	558	False	NA	5	True	AATAAA	-15	NA	42577824	42578366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42577800_42578400
transcript_79080.known	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_4	71.0297277358024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	12	True	NA	-43	True	NA	NA	NA	42577697	42572342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
transcript_79082.known	chr17	+	1608	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_8	109.925611210491	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	-4	True	NA	15	True	AATAAA	-19	NA	42609682	42615238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
transcript_79086.known	chr17	+	1719	10	FSM	ENSG00000131462.9	ENST00000681947.1	1719	10	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_8	113.26174209424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	196	False	NA	1	True	AATAAA	-5	NA	42609640	42615224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614658_42614843
transcript_79087.known	chr17	+	1899	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	0	0	0	0	multi-exon	TRUE	canonical	3	1361	junction_7	99.9982715900013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	196	False	NA	3	True	AATAAA	-7	NA	42609640	42615226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
transcript_79089.known	chr17	+	1753	10	FSM	ENSG00000131462.9	ENST00000680672.1	1753	10	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_7	104.138796271557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	196	False	NA	3	True	AATAAA	-7	NA	42609640	42615226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613999_42614259_42614413_42614495_42614658_42614843
transcript_79092.known	chr17	+	1980	9	FSM	ENSG00000131462.9	ENST00000681490.1	1980	9	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_7	100.786206273478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	196	False	NA	1	True	AATAAA	-5	NA	42609640	42615224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_79094.known	chr17	-	3749	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_6	21.1035393950873	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGAGACTGATGCTG	0	True	NA	-37	True	AATAAA	-17	NA	42609374	42579514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
transcript_79098.known	chr17	+	2233	8	FSM	ENSG00000131462.9	ENST00000588056.2	2233	8	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_6	99.4037325296003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	-16	True	NA	1	True	AATAAA	-5	NA	42609670	42615224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_79100.known	chr17	-	1632	8	FSM	ENSG00000141699.11	ENST00000586870.5	1632	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	78.0162201868618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGAAGTGAGAGTGTG	-12	True	NA	NA	False	NA	NA	NA	42609386	42581612	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42592055_42592163_42609085
transcript_79107.known	chr17	+	1782	11	FSM	ENSG00000037042.9	ENST00000251412.8	1782	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	161.0064905524	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	-3	True	NA	24	True	AATAAA	-26	NA	42659283	42667006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42662972_42663053_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_79115.nic	chr17	+	1860	9	NIC	ENSG00000037042.9	novel	1782	11	NA	NA	-43	0	intron_retention	TRUE	canonical	3	30	junction_4	163.882579916231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	NA	False	NA	24	True	AATAAA	-26	NA	42659240	42667006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42663376_42663504_42665475_42665828_42666086_42666240_42666322_42666485_42666602
transcript_79120.nic	chr17	+	2411	4	ISM	ENSG00000037042.9	ENST00000251412.8	1782	11	-43	4550	-43	1065	5prime_fragment	FALSE	canonical	3	154	junction_1	112.969022302576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGTGGTGGTAC	NA	False	NA	NA	False	AATAAA	-5	NA	42659240	42662456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638
transcript_79126.nnic	chr17	-	2818	13	NNC	ENSG00000068137.15	novel	3026	13	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.448637018073	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	6621	False	NA	NA	False	AAAAAG	-18	NA	42677038	42667913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_42668304_42669429_42669622_42669917_42670125_42670572_42670706_42670993_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
transcript_79131.known	chr17	-	1942	2	FSM	ENSG00000184451.5	ENST00000591765.1	1942	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGCAACCCAACAACT	0	True	NA	-13	True	ATTAAA	-16	NA	42683064	42679419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42680618_42682320
transcript_79132.known	chr17	+	5537	24	FSM	ENSG00000108797.12	ENST00000264638.9	5537	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.21122824399048	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTGTGGTAGCTGGC	16	True	NA	29	True	AATAAA	-20	NA	42682530	42699993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42682897_42683820_42683923_42684035_42684230_42684990_42685139_42685216_42685421_42685956_42686142_42686902_42687047_42687719_42687982_42688461_42688612_42688875_42689048_42689520_42689628_42690087_42690208_42690738_42690943_42691136_42691294_42691383_42691512_42691805_42691992_42692498_42692721_42693296_42693537_42695520_42695875_42696024_42696153_42697273_42697368_42697553_42697800_42697902_42697951_42698617
transcript_79133.known	chr17	-	4633	21	FSM	ENSG00000108799.13	ENST00000428826.7	4633	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	8.93084542470644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAAGTTGTGTACTG	7	True	NA	-7	True	AATAAA	-14	NA	42745040	42700274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_79134.known	chr17	-	2394	20	FSM	ENSG00000108799.13	ENST00000585893.5	2394	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	10.0643359803696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAGGGCACAAAACTGT	16	True	NA	NA	False	NA	NA	NA	42745031	42702384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_79135.known	chr17	-	2752	19	FSM	ENSG00000108799.13	ENST00000586103.5	2752	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_18	8.97819718492293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	32	False	NA	NA	False	NA	NA	NA	42745015	42703192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_79138.known	chr17	-	1985	5	FSM	ENSG00000197291.9	ENST00000589716.5	1985	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.33012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGAGCAGTGTGAAG	64	False	NA	NA	False	NA	NA	NA	42761257	42753913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42755214_42759738_42759881_42760425_42760514_42760634_42760712_42760879
transcript_7914.known	chr1	-	3001	2	FSM	ENSG00000117385.16	ENST00000492956.1	3001	2	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGCAAGAATCTGTCA	-6	True	NA	NA	False	NA	NA	NA	42767017	42759985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42762476_42766506
transcript_79140.known	chr17	+	858	4	FSM	ENSG00000131477.11	ENST00000589683.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	34.7083083233203	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	2	True	NA	9	True	AATAAA	-18	NA	42760774	42763041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761013_42761833_42761900_42762354_42762464_42762596
transcript_79141.known	chr17	+	548	4	FSM	ENSG00000131477.11	ENST00000588928.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	57.3120115391762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTTTGCCAACTGCT	32	False	NA	NA	False	NA	NA	NA	42760804	42762698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761076_42761833_42761900_42762354_42762464_42762596
transcript_79142.known	chr17	+	752	4	FSM	ENSG00000131477.11	ENST00000253796.10	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	29.0631496343164	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	0	True	NA	9	True	AATAAA	-18	NA	42761226	42763041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761359_42761833_42761900_42762354_42762464_42762596
transcript_79145.known	chr17	+	573	3	FSM	ENSG00000131477.11	ENST00000588576.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTGTAATCTTCAAAATA	7	False	NA	-30	True	NA	NA	NA	42761257	42763002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761359_42761833_42761900_42762596
transcript_79146.known	chr17	+	1088	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_3	43.4400736647626	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	-12	True	NA	29	True	ATTAAA	-14	NA	42773448	42779599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
transcript_79149.known	chr17	-	780	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_1	0	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGGCTGAGAGGCAG	-5	True	NA	-1	True	AATAAA	-28	NA	42798704	42797624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42798168_42798467
transcript_79151.known	chr17	+	4199	19	FSM	ENSG00000126562.17	ENST00000246914.10	4199	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.13798682276598	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCGTGAATCCATATGCCA	-8	True	NA	NA	False	AATAAA	-18	NA	42780609	42797066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42781317_42782757_42782931_42783936_42784158_42784421_42784580_42785096_42785186_42785265_42785483_42787277_42787543_42787777_42787900_42788129_42788189_42788289_42788408_42788680_42788798_42793591_42793730_42794613_42794669_42794771_42795383_42795460_42795522_42795624_42796034_42796122_42796323_42796480_42796579_42796685
transcript_7916.known	chr1	+	3440	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.93173009029038	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	-5	True	NA	21	True	AATAAA	-22	NA	42817121	42844991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
transcript_79170.known	chr17	-	2112	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	173.838150241363	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	10	True	NA	-12	True	AATAAA	-25	NA	42824263	42810133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
transcript_79171.known	chr17	-	2109	12	FSM	ENSG00000126581.13	ENST00000590099.6	2109	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	166.478946625156	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-9	True	NA	-12	True	AATAAA	-25	NA	42824282	42810133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
transcript_7918.known	chr1	+	4760	5	FSM	ENSG00000164008.17	ENST00000372525.7	4760	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	20.4572725454788	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTAGATGATGCTTGA	-28	True	NA	NA	False	AATAAA	-23	NA	42767248	42779491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42767391_42767508_42767625_42773562_42773650_42774736_42774869_42775208
transcript_79190.known	chr17	+	3144	11	FSM	ENSG00000131467.12	ENST00000293362.7	3144	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	516.524355669701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTAGCCTTCTGGTTTCC	45	False	NA	13	True	AATAAA	-22	NA	42833470	42843757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838691_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_79192.known	chr17	+	3182	11	FSM	ENSG00000131467.12	ENST00000590720.6	3182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1429	junction_6	134.082661071445	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCTGGTTTCCAAT	-29	True	NA	16	True	AATAAA	-25	NA	42833396	42843760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_79202.known	chr17	-	2504	11	FSM	ENSG00000126581.13	ENST00000543382.6	2504	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	174.500429798898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCACTTAACAATATGAA	-14	True	NA	39	True	NA	NA	NA	42824287	42810413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42819610_42820773_42820842_42823747_42823880_42824154
transcript_79208.nic	chr17	-	2012	11	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	206.290474816459	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGGGGTGCACTGTTG	NA	False	NA	-14	True	AATAAA	-23	NA	42824308	42810135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_42810929_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
transcript_79227.known	chr17	+	956	10	FSM	ENSG00000131467.12	ENST00000543428.5	956	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	540.738886348926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTAGAGTCTAATG	19	True	NA	-14	True	NA	NA	NA	42833444	42841695	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_7924.known	chr1	-	807	3	FSM	ENSG00000177868.12	ENST00000372521.9	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	57.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-11	True	NA	-32	True	AATAAA	-17	NA	42817397	42807051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42807501_42816430_42816581_42817189
transcript_7925.nnic	chr1	-	830	3	NNC	ENSG00000177868.12	novel	807	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-9	True	NA	-32	True	AATAAA	-17	NA	42817395	42807051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_42807501_42816430_42816606_42817189
transcript_79256.known	chr17	+	4011	4	FSM	ENSG00000131471.7	ENST00000308423.7	4011	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAATTGACTTTTTTTTT	-3	True	NA	6	True	AATAAA	-18	NA	42851198	42858124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42852944_42854447_42854734_42855443_42855574_42856274
transcript_7926.known	chr1	-	708	3	FSM	ENSG00000177868.12	ENST00000497437.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGGTAGATGGTGTT	-5	True	NA	NA	False	NA	NA	NA	42817252	42813409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42813905_42816430_42816581_42817189
transcript_79260.known	chr17	-	2150	17	FSM	ENSG00000108825.18	ENST00000421990.7	2150	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	133.940037306811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAAATAGATTGACTC	763	False	NA	-55	True	NA	NA	NA	42980528	42950549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_79263.known	chr17	-	1670	16	FSM	ENSG00000108825.18	ENST00000409103.5	1670	16	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_15	138.289776275118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAGATTGACTCAGAA	1298	False	NA	-51	True	NA	NA	NA	42979993	42950545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42979169_42979269_42979377_42979445_42979549_42979664_42979904
transcript_79271.known	chr17	-	1543	7	FSM	ENSG00000267060.7	ENST00000591916.7	1543	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	10.3077640640442	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCTCTTGAACTCAT	0	True	NA	-13	True	AATAAA	-14	NA	42980080	42968102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_79274.known	chr17	-	1320	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_11	29.9740934974143	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	4	True	NA	-31	True	AATAAA	-17	NA	42964454	42950525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_79278.known	chr17	+	3828	5	FSM	ENSG00000198863.8	ENST00000361677.6	5280	5	0	1452	0	-1452	multi-exon	FALSE	canonical	3	87	junction_3	2.04633819296811	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCCTCTGTCCTCTG	-1	True	NA	18	True	NA	NA	NA	42980564	42993690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42981075_42987255_42987415_42989340_42989540_42990316_42990437_42990850
transcript_7928.known	chr1	+	1859	4	FSM	ENSG00000164011.18	ENST00000372506.5	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	14.0554457615387	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	14	True	NA	NA	False	AGTAAA	-16	NA	42846627	42852477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
transcript_79281.known	chr17	+	959	4	FSM	ENSG00000198863.8	ENST00000589705.1	959	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	41.9629466182832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGACAGAGTGAAGCAG	15	True	NA	NA	False	NA	NA	NA	42980580	42991036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42981075_42987255_42987415_42990316_42990437_42990850
transcript_79283.known	chr17	+	1439	1	FSM	ENSG00000198863.8	ENST00000590836.1	1439	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACTCTGT	-1	True	NA	NA	False	NA	NA	NA	42980564	42982003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42980600_42982000
transcript_79284.known	chr17	+	585	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	4501.65866653615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAAGCCTGTGTCT	2	True	NA	53	True	ATTAAA	-8	NA	42998272	43002949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_79285.known	chr17	+	505	5	FSM	ENSG00000131469.15	ENST00000253788.12	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	6211	junction_1	2029.62428789173	1985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	-3	True	NA	63	True	ATTAAA	-18	NA	42998418	43002959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998472_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_79288.known	chr17	+	318	4	FSM	ENSG00000131469.15	ENST00000588830.1	318	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	3474.12860377326	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	14	True	NA	63	True	ATTAAA	-18	NA	42998435	43002959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998472_42998748_42998832_43002672_43002784_43002871
transcript_7929.known	chr1	+	1683	3	FSM	ENSG00000164011.18	ENST00000372507.5	1683	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	12	True	NA	NA	False	AGTAAA	-16	NA	42846625	42852477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42846658_42849290_42849414_42850949
transcript_79291.known	chr17	+	1872	3	FSM	ENSG00000131469.15	ENST00000593262.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	8517	junction_2	1525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	-3	True	NA	52	True	ATTAAA	-7	NA	42998418	43002948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43000103_43002672_43002784_43002871
transcript_79292.known	chr17	+	730	4	FSM	ENSG00000131469.15	ENST00000589913.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	8517	junction_3	1257.51112210677	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	-2	True	NA	63	True	ATTAAA	-18	NA	42998470	43002959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998832_42999932_43000103_43002672_43002784_43002871
transcript_79293.known	chr17	+	1182	7	FSM	ENSG00000068079.8	ENST00000415816.7	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	8.75595035770913	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	9	True	NA	20	True	AGTAAA	-17	NA	43006783	43014456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013374_43013475_43013663_43013775_43013883_43014107
transcript_79294.known	chr17	+	1232	7	FSM	ENSG00000068079.8	ENST00000438323.2	1232	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	6.90410505906933	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	6710	False	NA	20	True	AGTAAA	-17	NA	43006739	43014456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013380_43013475_43013663_43013775_43013883_43014107
transcript_79299.known	chr17	-	2699	6	FSM	ENSG00000108828.16	ENST00000355653.8	2699	6	0	0	0	0	multi-exon	TRUE	canonical	3	1736	junction_1	58.2237065120385	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-10	True	NA	-10	True	AATAAA	-14	NA	43022385	43014606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
transcript_79300.known	chr17	-	1174	6	FSM	ENSG00000108828.16	ENST00000587173.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_5	721.625775592862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACCTCTGAAGAGGTTG	19	True	NA	NA	False	NA	NA	NA	43022356	43015898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43022139
transcript_79301.nnic	chr17	-	2395	6	NNC	ENSG00000108828.16	novel	2699	6	NA	NA	-2562	0	intron_retention	FALSE	canonical	2	5	junction_5	729.609045996553	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	43027685	43014606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43027539
transcript_79306.known	chr17	+	4162	5	FSM	ENSG00000108830.10	ENST00000587250.4	4162	5	0	0	0	0	multi-exon	TRUE	canonical	3	748	junction_1	138.34558178706	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCAGAGTTTCTGTG	-4	True	NA	12	True	AATAAA	-19	NA	43025230	43032041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43025450_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_79310.nnic	chr17	+	1202	5	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	227	-2813	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_1	390.596578966073	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGCTTTAGTTTTG	195	False	NA	21	True	AATAAA	-19	NA	43025467	43029228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_79311.nnic	chr17	+	1902	5	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	227	-2113	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_1	390.596578966073	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCATCAAAAGCCTCCA	195	False	NA	NA	False	NA	NA	NA	43025467	43029928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_79316.known	chr17	-	2379	23	FSM	ENSG00000012048.23	ENST00000491747.6	2379	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	23.9239497554402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCAGCCACAGGTAC	22	True	NA	NA	False	NA	NA	NA	43125356	43045677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43082403_43082576_43090943_43091033_43094743_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_7932.known	chr1	+	1577	2	FSM	ENSG00000164011.18	ENST00000372508.7	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	-5	True	NA	NA	False	AGTAAA	-16	NA	42846608	42852477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42846658_42850949
transcript_79320.known	chr17	-	7088	23	FSM	ENSG00000012048.23	ENST00000357654.9	7088	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_22	19.7521836851164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	14	True	NA	-5	True	AATAAA	-21	NA	43125364	43044294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076615_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_79324.known	chr17	-	4497	10	FSM	ENSG00000012048.23	ENST00000354071.7	4497	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	17.3909299476608	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAAGTTGCAGCGT	162	False	NA	NA	False	AGTAAA	-27	NA	43125315	43091097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_79325.known	chr17	-	1612	10	FSM	ENSG00000012048.23	ENST00000494123.5	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	17.7770833197694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCCATGTAACTGAAAA	27	False	NA	NA	False	NA	NA	NA	43125450	43094111	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_79327.known	chr17	-	2291	11	FSM	ENSG00000012048.23	ENST00000652672.1	2291	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	28.6419273094532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GATAAAGAAAAAAAAGTACA	-6	True	NA	NA	False	NA	NA	NA	43125483	43093584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43121557_43121677_43124016_43124116_43125276
transcript_79329.known	chr17	+	4613	21	FSM	ENSG00000188554.15	ENST00000590996.6	4613	21	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_11	22.3049321899888	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGACTGGCTAGTCCTTG	3	True	NA	28	True	AATAAA	-19	NA	43171213	43211688	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
transcript_79339.nic	chr17	+	2723	17	ISM	ENSG00000188554.15	ENST00000589872.1	3097	21	-30	9093	-1	4644	5prime_fragment	FALSE	canonical	3	157	junction_11	23.239160779813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGGATTCTGGATTT	2	True	NA	8	True	AATAAA	-16	NA	43171212	43200764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166
transcript_79344.known	chr17	+	978	4	FSM	ENSG00000198496.12	ENST00000356906.7	978	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	16.7597401199687	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTTTTGTGAGC	-9	True	NA	15	True	AATAAA	-22	NA	43125639	43140333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43125771_43131207_43131271_43138656_43138923_43139815
transcript_79350.known	chr17	-	1741	6	FSM	ENSG00000188825.15	ENST00000664824.1	1741	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.49181208709839	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAAGCTGTCTCTCCT	11	True	NA	NA	False	ATTAAA	-23	NA	43388312	43338740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43339505_43341177_43341460_43377670_43377814_43379122_43379263_43381272_43381661_43388288
transcript_79352.known	chr17	-	1321	1	FSM	ENSG00000279602.1	ENST00000624705.1	1321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCGGACTTGCCCTGAGT	-4	True	NA	NA	False	AATAAA	-17	NA	43361361	43360040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43360000_43361400
transcript_79353.nnic	chr17	+	2077	4	NNC	ENSG00000175906.5	novel	1578	2	NA	NA	-34	7479	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	341.886270888759	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATTCAGTTGTTTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	43398958	43408616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_43399094_43399660_43400335_43402583_43402707_43407471
transcript_79357.known	chr17	+	1578	2	FSM	ENSG00000175906.5	ENST00000320033.5	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	0	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATCTCTGTAGTTTT	0	True	NA	6	True	NA	NA	NA	43398992	43401137	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43399094_43399660
transcript_79359.known	chr17	+	5549	23	FSM	ENSG00000067596.12	ENST00000262415.8	5549	23	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_22	22.1231059795368	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCTAGGCTGGCATCA	-14	True	NA	NA	False	NA	NA	NA	43483974	43525670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43523627
transcript_79363.known	chr17	+	3809	23	FSM	ENSG00000067596.12	ENST00000540306.5	3809	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_22	45.6741287060613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGTTTTTAAAATTT	-26	True	NA	11	True	ATTAAA	-13	NA	43483962	43526786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43526495
transcript_79368.known	chr17	+	235	3	FSM	ENSG00000067596.12	ENST00000605777.1	235	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATGGTGTAGGTTTTG	151	False	NA	NA	False	NA	NA	NA	43484139	43490493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43484186_43489448_43489535_43490390
transcript_79374.known	chr17	-	1727	13	FSM	ENSG00000175832.13	ENST00000591713.5	1727	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	168.404522900465	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAATGGCAAGTCTAGA	1	True	NA	NA	False	NA	NA	NA	43545899	43528336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43545860
transcript_79375.known	chr17	-	2335	13	FSM	ENSG00000175832.13	ENST00000319349.10	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_12	122.828782140923	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-5	True	NA	-6	True	AATAAA	-18	NA	43546340	43527845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
transcript_7938.known	chr1	-	3384	10	FSM	ENSG00000117394.24	ENST00000426263.10	3384	10	0	0	0	0	multi-exon	TRUE	canonical	3	478	junction_7	55.6372732333236	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAGAAGTTTGCTTTT	-1	True	NA	4	True	AATAAA	-41	NA	42958868	42925352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_79382.known	chr17	-	1775	12	FSM	ENSG00000175832.13	ENST00000545954.5	1775	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_11	172.919892598273	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTCAGCTCAGCTTCT	30	False	NA	NA	False	NA	NA	NA	43546323	43528277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43546184
transcript_79388.nic	chr17	-	2290	12	NIC	ENSG00000175832.13	novel	2335	13	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	196.524975806391	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	NA	False	NA	-6	True	AATAAA	-18	NA	43546457	43527845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
transcript_794.known	chr1	-	472	5	FSM	ENSG00000160087.21	ENST00000509720.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	267.237137202149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTCCCCTTGCCAGAC	17	True	NA	NA	False	ATTAAA	-41	NA	1273827	1255438	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1263345_1263387_1273665
transcript_79405.nnic	chr17	-	2128	10	NIC	ENSG00000175832.13	novel	2182	12	NA	NA	-73	0	combination_of_known_splicesites	TRUE	canonical	3	26	junction_9	190.162763292948	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	15	True	NA	-6	True	AATAAA	-18	NA	43545475	43527845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43545273
transcript_79416.known	chr17	-	2182	12	FSM	ENSG00000175832.13	ENST00000393664.6	2182	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_11	75.4757910943788	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-8	True	NA	-6	True	AATAAA	-18	NA	43545671	43527845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
transcript_79417.known	chr17	-	2674	3	FSM	ENSG00000005102.14	ENST00000318579.9	2674	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCAGGCCTTTTTCTTT	0	True	NA	NA	False	AATAAA	-17	NA	43661922	43640388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43642033_43643487_43643661_43661065
transcript_79418.known	chr17	-	2296	2	FSM	ENSG00000167941.3	ENST00000301691.3	2296	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAAAGGATGTGGTCTCAT	-2	True	NA	NA	False	AATAAA	-16	NA	43758791	43753737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43755764_43758521
transcript_79419.nic	chr17	-	1330	4	NIC	ENSG00000108861.9	novel	1019	4	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	49.6051072639367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGGTATTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	43779015	43766130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_79420.known	chr17	-	4095	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	4	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-11	True	NA	NA	False	AATAAA	-17	NA	43778977	43766124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43769815_43774711_43774939_43778799
transcript_79423.known	chr17	-	2790	20	FSM	ENSG00000161647.19	ENST00000398389.9	2790	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.15226913524314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGCCTAATGGGTTGT	14	True	NA	NA	False	AATAAA	-17	NA	43833146	43800810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43816676_43816698_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_79428.known	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	4.04450549404473	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-10	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_79442.nic	chr17	-	2386	9	ISM	ENSG00000161647.19	ENST00000496503.5	2186	19	-51	22778	-51	845	5prime_fragment	FALSE	canonical	3	14	junction_4	2.44948974278318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTACTTGGTTACT	NA	False	NA	NA	False	AATAAA	-21	NA	43833221	43824195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_7945.known	chr1	-	2652	9	FSM	ENSG00000117394.24	ENST00000675112.1	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_6	58.9660919512223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTTAGAAACATGGTT	2401	False	NA	-35	True	TATAAA	-5	NA	42958674	42926168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_79451.known	chr17	-	4202	13	FSM	ENSG00000108852.16	ENST00000269095.9	4202	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	72.8072035508087	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTGGCTCTGCTTTTC	-10	True	NA	-4	True	ATTAAA	-13	NA	43907536	43875359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43904429_43904494_43907473
transcript_79456.known	chr17	-	4206	12	FSM	ENSG00000108852.16	ENST00000377184.7	4206	12	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_7	18.5142339702223	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTCTGCTTTTCTTT	22	True	NA	-1	True	ATTAAA	-16	NA	43900598	43875356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_79457.known	chr17	-	2121	12	FSM	ENSG00000108852.16	ENST00000523501.5	2121	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	57.6908260034356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCCCTGTGTCGGAGG	-10	True	NA	NA	False	NA	NA	NA	43907536	43877376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43907473
transcript_79476.nic	chr17	-	1112	8	ISM	ENSG00000108852.16	ENST00000377184.7	4206	12	-62	5768	-62	1220	5prime_fragment	FALSE	canonical	3	157	junction_3	21.0809905665105	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGAATGATGTATTTGA	9006	False	NA	NA	False	AAGAAA	-3	NA	43900660	43881124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_79478.known	chr17	-	1053	7	FSM	ENSG00000131096.11	ENST00000360085.6	1053	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.434983894999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAATGTATGCCTTTGTAT	NA	False	NA	-8	True	AATAAA	-19	NA	44004469	43952737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43952981_43953108_43953190_43953295_43953484_43953849_43953976_43957937_43958029_43966287_43966533_44004390
transcript_79479.known	chr17	-	580	3	FSM	ENSG00000131096.11	ENST00000592796.2	728	3	0	148	0	-148	multi-exon	FALSE	canonical	3	14	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAACCCGGATTCTGCC	-2	True	NA	NA	False	NA	NA	NA	43953940	43952888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43953190_43953295_43953484_43953849
transcript_7948.known	chr1	-	2398	9	FSM	ENSG00000117394.24	ENST00000630287.2	2398	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	205.889191981998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTGAAATGCTTGT	2227	False	NA	-22	True	TATAAA	-18	NA	42958848	42926155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_79480.known	chr17	+	2114	7	FSM	ENSG00000161653.11	ENST00000293404.8	2114	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	11.6821326059167	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCTTACACTTGAAAGA	6	True	NA	19	True	ATTAAA	-21	NA	44004621	44009068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44005090_44005636_44005912_44006023_44006238_44006528_44006710_44007322_44007495_44007590_44007774_44008447
transcript_79488.known	chr17	+	1955	4	FSM	ENSG00000161653.11	ENST00000592915.1	1955	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	10.077477638554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTCAGCTTACACTTG	-2	True	NA	14	True	ATTAAA	-16	NA	44006047	44009063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44006238_44006528_44007495_44007590_44007774_44008447
transcript_79489.known	chr17	-	1525	4	FSM	ENSG00000091947.10	ENST00000206380.8	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	6.34209919681348	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTGCTTTTCTGTT	20	True	NA	0	True	AATAAA	-16	NA	44014963	44011187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44012237_44013008_44013156_44014356_44014538_44014815
transcript_79493.known	chr17	-	965	3	FSM	ENSG00000091947.10	ENST00000587529.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCATATTCAGAGGTGG	31	True	NA	NA	False	NA	NA	NA	44014952	44012508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44013156_44014356_44014538_44014815
transcript_79497.known	chr17	-	966	6	FSM	ENSG00000161654.10	ENST00000585388.2	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	514.698979987332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCCGGGGGAGGGAAG	-17	True	NA	NA	False	NA	NA	NA	44066659	44036142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44036301_44036861_44037103_44037411_44037539_44040146_44040257_44063800_44063935_44066463
transcript_79502.known	chr17	-	2552	5	FSM	ENSG00000161654.10	ENST00000293406.8	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_1	82.0289583013219	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTGAACTTGATTT	-29	True	NA	-3	True	AGTAAA	-18	NA	44066671	44034327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44036301_44037411_44037539_44040146_44040257_44063800_44063935_44066463
transcript_79512.known	chr17	+	1718	7	FSM	ENSG00000141349.9	ENST00000588558.5	1718	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	397.040999842026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCGGCCCCAATAAAGCC	9	True	NA	-10	True	NA	NA	NA	44070749	44076310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071184_44071627_44071822_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_79514.known	chr17	+	1572	6	FSM	ENSG00000141349.9	ENST00000585361.5	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	315.830080897941	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCAGCCAGGGCGGCCC	10	True	NA	-20	True	NA	NA	NA	44070750	44076300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071243_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_79515.known	chr17	+	805	6	FSM	ENSG00000141349.9	ENST00000591696.1	805	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	331.769196882411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGAAGATAGCCTGCC	-12	True	NA	NA	False	NA	NA	NA	44070891	44075841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071184_44074159_44074230_44074750_44074771_44074968_44075088_44075309_44075452_44075679
transcript_79518.known	chr17	+	1573	6	FSM	ENSG00000141349.9	ENST00000269097.9	1573	6	0	0	0	0	multi-exon	TRUE	canonical	3	771	junction_4	44.001818144254	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	-6	True	NA	24	True	AATAAA	-18	NA	44070734	44076344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_79523.known	chr17	+	851	5	FSM	ENSG00000141349.9	ENST00000590639.1	851	5	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_3	28.4462211901687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGAAATGGCCAGAAGA	263	False	NA	NA	False	NA	NA	NA	44071166	44075832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075452_44075679
transcript_79537.known	chr17	-	3662	27	FSM	ENSG00000108840.16	ENST00000586802.5	3662	27	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_26	108.041576481097	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGTGCCGTGTGGGTC	372	False	NA	35	True	ATTAAA	-22	NA	44123275	44078293	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123253
transcript_79538.known	chr17	-	5319	27	FSM	ENSG00000108840.16	ENST00000682912.1	5319	27	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_25	74.9307076354252	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGCCAATGTCTCTA	6	True	NA	-7	True	AATAAA	-19	NA	44123641	44076752	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
transcript_79541.known	chr17	-	5326	27	FSM	ENSG00000108840.16	ENST00000225983.10	5326	27	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_25	77.1029435581123	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATGTCTCTATTCTCTG	9	True	NA	0	True	AATAAA	-26	NA	44123638	44076745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110804_44117493_44117705_44123503
transcript_79553.known	chr17	-	5040	25	FSM	ENSG00000108840.16	ENST00000336057.9	5040	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	108.969797038751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGGCCAATGTCTCT	-13	True	NA	-8	True	AATAAA	-18	NA	44123618	44076753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
transcript_79571.known	chr17	+	2698	10	FSM	ENSG00000125319.15	ENST00000585683.6	2698	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	27.0573236930798	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-1	True	NA	14	True	AATAAA	-14	NA	44141929	44162476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_79579.nic	chr17	+	2649	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	39.0414443252296	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	44141869	44162476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44161870
transcript_79582.nnic	chr17	+	2617	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-36	0	combination_of_known_splicesites	TRUE	canonical	3	16	junction_4	36.5171192730204	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	44141869	44162476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_79583.nic	chr17	+	2674	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	39.1980149369837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	44141869	44162476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_79597.nic	chr17	+	2533	8	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	35.7371355475345	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	44141869	44162476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_79604.known	chr17	+	2272	7	FSM	ENSG00000125319.15	ENST00000245382.6	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	49.6770123453047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-14	True	NA	14	True	AATAAA	-14	NA	44142021	44162476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44161870
transcript_79616.nic	chr17	-	1105	4	NIC	ENSG00000267080.7	novel	2249	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	0.816496580927726	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	-23	True	NA	-14	True	AATAAA	-6	NA	44186732	44175967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44176643_44181622_44181721_44182929_44183094_44186564
transcript_7962.known	chr1	+	1124	4	FSM	ENSG00000227533.7	ENST00000431759.5	1124	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTAAGCTTTATTTT	8	True	NA	NA	False	AATAAA	-17	NA	42959048	42983358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42959578_42970248_42970395_42973973_42974189_42983124
transcript_79623.nic	chr17	-	2240	4	NIC	ENSG00000267080.7	novel	2249	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	10.6144555520604	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATAATATTTTCT	-13	True	NA	-19	True	AATAAA	-1	NA	44186722	44175972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44177817_44181622_44181721_44182929_44183070_44186564
transcript_79624.known	chr17	-	2249	4	FSM	ENSG00000267080.7	ENST00000585457.6	2249	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	0.471404520791032	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATAATATTTTCT	2	True	NA	-19	True	AATAAA	-1	NA	44186707	44175972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44177817_44181622_44181721_44182929_44183094_44186564
transcript_79626.known	chr17	-	2024	4	FSM	ENSG00000267080.7	ENST00000669052.1	2024	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.1993265821489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGGCTAATTTTTTAA	0	True	NA	NA	False	NA	NA	NA	44186709	44176220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44177817_44181622_44181742_44182929_44183094_44186564
transcript_79627.known	chr17	-	916	3	FSM	ENSG00000267080.7	ENST00000588785.6	916	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	6.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	2	True	NA	-14	True	AATAAA	-6	NA	44186707	44175967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44176643_44181622_44181721_44186564
transcript_79629.known	chr17	-	1827	3	FSM	ENSG00000267080.7	ENST00000667107.1	1827	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTACTCTGTCTCCACC	-5	True	NA	NA	False	NA	NA	NA	44186714	44176436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44176643_44181622_44183094_44186564
transcript_7963.known	chr1	+	3075	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	0	4	0	multi-exon	FALSE	canonical	3	6	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	42959103	42976428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42959578_42970248_42970395_42973973
transcript_79630.nnic	chr17	-	1050	3	NNC	ENSG00000267080.7	novel	2249	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	22	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATAATATTTTCT	-26	True	NA	-19	True	AATAAA	-1	NA	44186735	44175972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_44176754_44181622_44181721_44186564
transcript_79634.known	chr17	-	1853	3	FSM	ENSG00000267080.7	ENST00000667684.1	1853	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	7	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGGCTAATTTTTTAA	-14	True	NA	NA	False	NA	NA	NA	44186723	44176220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44177817_44181622_44181721_44186564
transcript_79635.nnic	chr17	-	2131	3	NIC	ENSG00000267080.7	novel	2249	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	16	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATAATATTTTCT	-23	True	NA	-19	True	AATAAA	-1	NA	44186732	44175972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44177817_44181622_44181742_44186564
transcript_79636.known	chr17	-	3206	3	FSM	ENSG00000267080.7	ENST00000656516.1	3206	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGGCTAATTTTTTAA	6	True	NA	NA	False	NA	NA	NA	44186703	44176220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44177817_44181622_44183094_44186564
transcript_79642.known	chr17	-	4997	21	FSM	ENSG00000108312.15	ENST00000302904.8	4997	21	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	99.1516389173674	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	476	False	NA	-5	True	AATAAA	-20	NA	44221626	44205032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
transcript_79648.known	chr17	-	4795	21	FSM	ENSG00000108312.15	ENST00000436088.6	4795	21	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_20	88.279938264591	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-1	True	NA	-12	True	AATAAA	-13	NA	44219675	44205039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_7965.known	chr1	+	536	4	FSM	ENSG00000186973.11	ENST00000335282.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	-13	True	NA	NA	False	AATAAA	-19	NA	43147903	43156396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43148085_43150760_43150821_43152827_43152932_43156205
transcript_79650.nic	chr17	-	3295	21	NIC	ENSG00000108312.15	novel	4997	21	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_20	93.713606269314	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	-1	True	NA	NA	False	NA	NA	NA	44221024	44206593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_79658.known	chr17	-	2683	20	FSM	ENSG00000108312.15	ENST00000393606.7	2683	20	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_19	77.2329641275177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATACGG	2352	False	NA	NA	False	NA	NA	NA	44219750	44207115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_79659.known	chr17	-	4684	20	FSM	ENSG00000108312.15	ENST00000343638.9	4684	20	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_19	83.9887210472805	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	1139	False	NA	-5	True	AATAAA	-20	NA	44220963	44205032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_7966.known	chr1	+	365	2	FSM	ENSG00000186973.11	ENST00000481753.1	365	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	4811	False	NA	NA	False	AATAAA	-19	NA	43152757	43156396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43152932_43156205
transcript_7967.known	chr1	-	1503	10	FSM	ENSG00000117395.13	ENST00000431635.6	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	449.492168871209	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTGTCTCATCCTT	NA	False	NA	0	True	GATAAA	-25	NA	43172570	43164174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172142_43172279
transcript_79670.nic	chr17	-	3816	20	Fusion	ENSG00000288877.1_ENSG00000108312.15	novel	4997	21	NA	NA	15	0	multi-exon	FALSE	canonical	3	74	junction_19	90.5616821980935	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	-15	False	NA	NA	False	NA	NA	NA	44222117	44206593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
transcript_79692.known	chr17	-	3951	13	FSM	ENSG00000087152.16	ENST00000587097.6	3951	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_12	28.044112077622	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-10	True	NA	-16	True	AATAAA	-19	NA	44199884	44191804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196080_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019_44198131_44199495
transcript_79695.known	chr17	-	3811	12	FSM	ENSG00000087152.16	ENST00000389384.8	3811	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	18.0847408397154	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	1805	False	NA	-16	True	AATAAA	-19	NA	44198379	44191804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196080_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019
transcript_79697.known	chr17	-	3523	12	FSM	ENSG00000087152.16	ENST00000454077.6	3523	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	40.2249870948004	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	2114	False	NA	-16	True	AATAAA	-19	NA	44198070	44191804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196101_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019
transcript_7970.known	chr1	-	1352	9	FSM	ENSG00000117395.13	ENST00000236051.3	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_6	80.4794228359026	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCTCATTTCCTTTGT	-5	True	NA	-9	True	GATAAA	-16	NA	43172290	43164183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
transcript_79707.known	chr17	+	1580	6	FSM	ENSG00000168591.16	ENST00000446571.7	1580	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	39.0865705837696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGCCTGCAAGGGCAGC	-12	True	NA	NA	False	NA	NA	NA	44186969	44191226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187110_44187675_44187744_44187906_44188010_44188934_44189300_44189410_44189589_44190500
transcript_79740.known	chr17	+	747	5	FSM	ENSG00000168591.16	ENST00000588413.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	45.2679522399677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTTGTGGTGCTG	-1	True	NA	NA	False	NA	NA	NA	44187233	44190721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187432_44189021_44189092_44189206_44189300_44189423_44189589_44190500
transcript_79750.known	chr17	+	2151	4	FSM	ENSG00000168591.16	ENST00000592825.1	2151	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	14.1656862405839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	37	True	NA	-4	True	AATAAA	-2	NA	44187271	44191711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187744_44187906_44188010_44188934_44189300_44190500
transcript_79751.nic	chr17	+	2759	4	NIC	ENSG00000168591.16	novel	1580	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	43	junction_1	33.008416435139	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGCCTCTTTCTGTGA	-15	True	NA	10	True	AATAAA	-16	NA	44186966	44191725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44187744_44187906_44188010_44188934_44189589_44190500
transcript_79769.known	chr17	+	1921	3	FSM	ENSG00000168591.16	ENST00000357984.7	1921	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	50.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	4	True	NA	15	True	AATAAA	-21	NA	44186985	44191730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187110_44189021_44189589_44190500
transcript_7977.nnic	chr1	+	2189	3	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-300	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	83.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	19	False	NA	28	True	AATAAA	-29	NA	43270645	43274002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43271254_43272183_43272340_43272577
transcript_79774.known	chr17	+	1837	3	FSM	ENSG00000168591.16	ENST00000589184.5	1837	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	14.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	40	True	NA	-4	True	AATAAA	-2	NA	44187274	44191711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187744_44188934_44189092_44190500
transcript_79776.known	chr17	+	2418	3	FSM	ENSG00000168591.16	ENST00000319511.6	2418	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	38.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	-29	True	NA	11	True	AATAAA	-17	NA	44187205	44191726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187744_44188934_44189589_44190500
transcript_79778.nic	chr17	+	2534	3	NIC	ENSG00000168591.16	novel	1969	4	NA	NA	16	0	intron_retention	FALSE	canonical	3	18	junction_1	48	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGCCTCTTTCTGTGA	20	True	NA	10	True	AATAAA	-16	NA	44187001	44191725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44187744_44189021_44189589_44190500
transcript_7978.known	chr1	+	567	3	FSM	ENSG00000179178.11	ENST00000456751.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCTGGCAGAGCAGG	250	False	NA	NA	False	GGGGCT	-7	NA	43270945	43272769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43271165_43272183_43272340_43272577
transcript_79780.known	chr17	+	1918	3	FSM	ENSG00000168591.16	ENST00000589785.1	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	47	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTGTGGTCCTGCAG	27	True	NA	-3	True	AATAAA	-3	NA	44187261	44191712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187401_44189021_44189589_44190500
transcript_79783.nic	chr17	+	2010	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	8	0	intron_retention	FALSE	canonical	3	32	junction_1	41	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGCCTCTTTCTGTGA	-21	True	NA	10	True	AATAAA	-16	NA	44187213	44191725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44187432_44189021_44189589_44190500
transcript_79785.known	chr17	+	1505	2	FSM	ENSG00000168591.16	ENST00000589856.1	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	419	False	NA	NA	False	NA	NA	NA	44187653	44190349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187744_44188934
transcript_79787.known	chr17	-	3010	20	FSM	ENSG00000108312.15	ENST00000527034.5	3010	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.753831045118	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	20	True	NA	NA	False	NA	NA	NA	44220854	44206593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207702_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_79790.known	chr17	+	1821	11	FSM	ENSG00000108309.14	ENST00000225441.11	1821	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.97594212184989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGGAGACAGAGACATCAA	-5	True	NA	22	True	AATAAA	-27	NA	44308595	44317870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44317484
transcript_79791.known	chr17	+	2005	11	FSM	ENSG00000108309.14	ENST00000426726.8	2005	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.77581163127746	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	0	True	NA	13	True	AATAAA	-15	NA	44308600	44318670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44318095
transcript_79792.known	chr17	+	1675	11	FSM	ENSG00000108309.14	ENST00000590941.5	1675	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.83838816136118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTCTCCCCCAC	-18	True	NA	NA	False	NA	NA	NA	44308582	44317726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44308940_44312579_44312696_44313118_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44317484
transcript_79793.nic	chr17	+	2015	11	NIC	ENSG00000108309.14	novel	2005	11	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	5.64003546088143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGCCTTGTATGTGGG	-26	True	NA	12	True	AATAAA	-14	NA	44308574	44318669	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44308940_44312579_44312696_44313118_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44318095
transcript_79809.known	chr17	-	1542	12	FSM	ENSG00000013306.16	ENST00000590194.5	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	669.995263335915	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGAACTTCTGCCTG	1	True	NA	NA	False	NA	NA	NA	44324809	44319641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323591_44324710
transcript_7981.known	chr1	-	1486	3	FSM	ENSG00000253313.6	ENST00000523677.6	1486	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	3	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCACTCATTTTTATTT	0	True	NA	-16	True	AATAAA	-30	NA	43285581	43281876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43283108_43283251_43283369_43285443
transcript_79816.known	chr17	-	1581	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_8	501.50864959623	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	-13	True	NA	NA	False	NA	NA	NA	44324823	44319627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
transcript_7982.known	chr1	-	629	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	54.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACCCCACTTCCCTGA	-4	True	NA	NA	False	GGGGCT	-21	NA	43285617	43282660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43283108_43283251_43283369_43285552
transcript_79823.known	chr17	-	1274	11	FSM	ENSG00000013306.16	ENST00000537904.6	1274	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	685.35174180854	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGGCTGTCCCTCTGG	-17	True	NA	NA	False	GGGGCT	-32	NA	44324827	44319869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44323283_44323344_44323477_44323578_44324710
transcript_79828.nic	chr17	-	1824	11	NIC	ENSG00000013306.16	novel	1607	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	1599	junction_7	247.434920736746	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	1896	False	NA	NA	False	NA	NA	NA	44324888	44319627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323578_44324710
transcript_7983.known	chr1	+	3893	23	FSM	ENSG00000066056.14	ENST00000372476.8	3893	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	3.03594172354483	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATGTCTACCTTTTACT	-2	True	NA	5	True	AATAAA	-18	NA	43300981	43323108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43301130_43304850_43305166_43305232_43305344_43306839_43306996_43307141_43307274_43307431_43307573_43307795_43307925_43308985_43309132_43309387_43309533_43311670_43311830_43311993_43312132_43312304_43312602_43313134_43313426_43313777_43313969_43317198_43317410_43317563_43317675_43317881_43318073_43319234_43319349_43319458_43319530_43321268_43321310_43321395_43321493_43321615_43321716_43322650
transcript_79890.known	chr17	+	2130	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	125.616700942015	3497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	-1	True	NA	30	True	AATAAA	-19	NA	44345301	44353106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_79899.nic	chr17	+	2430	13	NIC	ENSG00000030582.18	novel	2130	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	130	junction_1	264.429298994394	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	-6	True	NA	30	True	AATAAA	-19	NA	44345272	44353106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_7990.known	chr1	+	1649	11	FSM	ENSG00000117399.14	ENST00000310955.11	1649	11	0	0	0	0	multi-exon	TRUE	canonical	3	1218	junction_1	223.637228564477	2877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	2	True	NA	55	True	AATAAA	-32	NA	43358980	43363203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43359007_43359166_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_79939.known	chr17	+	1632	9	FSM	ENSG00000030582.18	ENST00000589265.5	1632	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	367.113997962486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTTGTACACTTTC	2	True	NA	6	True	NA	NA	NA	44345304	44353082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_79946.nic	chr17	-	1947	4	ISM	ENSG00000161682.15	ENST00000588067.1	964	6	-45	1495	-26	-1495	5prime_fragment	TRUE	canonical	3	28	junction_1	99.7095782761115	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTGGAATTGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	44363879	44357800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44359144_44359578_44359672_44359904_44360133_44363596
transcript_79949.nic	chr17	-	2788	26	ISM	ENSG00000005961.19	ENST00000262407.6	3479	30	4255	0	-31	0	3prime_fragment	FALSE	canonical	3	14	junction_19	8.88540376122548	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	4250	False	NA	-36	True	AATAAA	-16	NA	44385394	44372180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_79952.known	chr17	-	2618	25	FSM	ENSG00000005961.19	ENST00000648408.1	2618	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	9.90370301116372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	15	True	NA	-35	True	AATAAA	-17	NA	44385340	44372179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44372424_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_79954.nnic	chr17	-	2687	25	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_19	9.70171448192993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	9	True	NA	-36	True	AATAAA	-16	NA	44385346	44372180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_79957.nnic	chr17	-	2644	25	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_18	9.10433352249844	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	3	True	NA	-36	True	AATAAA	-16	NA	44385352	44372180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44372424_44374353_44374471_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_79978.known	chr17	-	496	3	FSM	ENSG00000005961.19	ENST00000587295.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	9171	False	NA	-36	True	AATAAA	-16	NA	44376184	44372180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44372424_44375832_44375986_44376084
transcript_79981.known	chr17	-	4713	9	FSM	ENSG00000186566.13	ENST00000587228.5	4713	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	50.3039200758748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTTGCTTTCAGT	-10	True	NA	NA	False	NA	NA	NA	44503404	44397415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44467096_44467115_44474828_44474904_44503325
transcript_79985.known	chr17	-	6832	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	15.7997675002268	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCAGAGTCTGTCGTAA	-12	True	NA	-4	True	AATAAA	-18	NA	44503406	44395280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_79990.nic	chr17	-	832	7	ISM	ENSG00000186566.13	ENST00000591680.6	6832	8	-232	10699	-208	-4572	5prime_fragment	FALSE	canonical	3	101	junction_1	17.0236763231552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAAAAGCCCTTCGGCG	NA	False	NA	NA	False	NA	NA	NA	44503638	44405979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_79993.nic	chr17	-	549	5	ISM	ENSG00000186566.13	ENST00000591680.6	6832	8	-169	39788	-145	0	5prime_fragment	FALSE	canonical	3	104	junction_3	16.7182534973005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGTATTTAAACAAAGCT	-8	True	NA	NA	False	AAAAAG	-29	NA	44503575	44435068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_79994.known	chr17	-	650	3	FSM	ENSG00000186566.13	ENST00000592154.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGGCGCCTGTAGTC	172	False	NA	NA	False	NA	NA	NA	44503430	44473289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44473760_44474828_44474904_44503325
transcript_79995.known	chr17	-	565	2	FSM	ENSG00000186566.13	ENST00000588554.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTTATATTAAAAACAT	-12	True	NA	NA	False	NA	NA	NA	44503406	44474419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44474904_44503325
transcript_79998.known	chr17	+	3779	1	FSM	ENSG00000180340.7	ENST00000315323.5	3779	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTATCCTTTTAATTG	0	True	NA	27	True	AATAAA	-21	NA	44557483	44561262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44557500_44561300
transcript_79999.known	chr17	+	4610	8	FSM	ENSG00000180336.18	ENST00000409122.7	4610	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.67486401886892	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTCATTTTTCTAAA	12	True	NA	8	True	AATAAA	-18	NA	44656467	44675801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44656683_44657126_44657262_44662316_44662472_44665383_44665489_44666375_44668234_44669382_44669518_44673365_44673547_44673975
transcript_8.known	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00022_+_0_700
transcript_80000.known	chr17	-	2114	5	FSM	ENSG00000180329.14	ENST00000315286.13	2114	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	122.7202102345	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-4	True	NA	-9	True	AATAAA	-40	NA	44689776	44677439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44679044_44680584_44680644_44682002_44682139_44683871_44683960_44689549
transcript_80004.known	chr17	-	2058	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	138.843637072628	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-7	True	NA	-9	True	AATAAA	-40	NA	44689779	44677439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
transcript_80015.nic	chr17	+	3470	13	ISM	ENSG00000161692.18	ENST00000393547.6	1810	15	14	1717	14	308	5prime_fragment	FALSE	canonical	3	13	junction_5	14.613540144522	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	-24	True	NA	15	True	AATAAA	-23	NA	44708621	44750547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_80019.nic	chr17	+	3364	13	NIC	ENSG00000161692.18	novel	3015	14	NA	NA	-17	308	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	17.7832239921662	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	136	False	NA	15	True	AATAAA	-23	NA	44708826	44750547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44708939_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_80023.nnic	chr17	+	3310	12	NIC	ENSG00000161692.18	novel	3015	14	NA	NA	0	308	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	17.5969569119772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	19	True	NA	15	True	AATAAA	-23	NA	44708664	44750547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44747082_44747192_44747390_44747516_44748340
transcript_80025.known	chr17	+	2998	12	FSM	ENSG00000161692.18	ENST00000526924.5	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	12.5993571920512	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCACTTTTTCTT	7	True	NA	NA	False	NA	NA	NA	44708697	44750239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_80027.nnic	chr17	+	3306	12	NNC	ENSG00000161692.18	novel	2998	12	NA	NA	-23	308	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	15.7101851470749	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	-13	True	NA	15	True	AATAAA	-23	NA	44708632	44750547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741400_44741453_44747082_44747192_44747390_44747516_44748340
transcript_80034.nnic	chr17	+	3272	11	NIC	ENSG00000161692.18	novel	2998	12	NA	NA	7	308	combination_of_known_splicesites	FALSE	canonical	3	11	junction_8	16.4258941917936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	NA	False	NA	15	True	AATAAA	-23	NA	44708614	44750547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44747082_44747192_44747390_44747516_44748340
transcript_80038.nic	chr17	+	3340	11	NIC	ENSG00000161692.18	novel	2998	12	NA	NA	-7	308	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	17.0704422906965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	NA	False	NA	15	True	AATAAA	-23	NA	44708600	44750547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44708840_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_80047.known	chr17	+	836	5	FSM	ENSG00000161692.18	ENST00000528766.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	5.3851648071345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACCTCCAACTCTG	10	True	NA	NA	False	NA	NA	NA	44708655	44731218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_80051.known	chr17	+	933	5	FSM	ENSG00000161692.18	ENST00000532789.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	21.821720830402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGCGAAACCCCATCT	171	False	NA	NA	False	NA	NA	NA	44708861	44731422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44708939_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_80053.known	chr17	+	4614	27	FSM	ENSG00000073670.14	ENST00000200557.11	4614	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	6.09114693681881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCGTTTCTCTCCTGTC	-4	True	NA	8	True	ATTAAA	-37	NA	44758987	44781846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44759261_44759721_44759898_44769717_44769795_44769981_44770049_44771583_44771670_44771755_44771832_44772266_44772334_44772398_44772467_44772856_44772932_44773013_44773086_44773260_44773428_44774294_44774380_44774491_44774583_44774697_44774750_44775211_44775312_44775393_44775466_44775583_44775677_44776126_44776208_44776744_44776796_44776898_44776963_44777165_44777266_44777481_44777602_44777694_44777864_44777951_44778067_44778151_44778243_44779221_44779240_44779738
transcript_80060.nic	chr17	+	3596	9	ISM	ENSG00000073670.14	ENST00000200557.11	4614	27	16959	0	389	0	intron_retention	FALSE	canonical	3	8	junction_8	4.06201920231798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCGTTTCTCTCCTGTC	481	False	NA	8	True	ATTAAA	-37	NA	44775946	44781846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_44776208_44776744_44776796_44776898_44776963_44777165_44777266_44777481_44777602_44777694_44777864_44777951_44778067_44778151_44778243_44779221
transcript_80063.known	chr17	-	478	3	FSM	ENSG00000182963.11	ENST00000586267.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	93.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCATGTACGCTTCTG	1366	False	NA	NA	False	NA	NA	NA	44829694	44805607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44805838_44807393_44807470_44829522
transcript_80064.known	chr17	-	7692	3	FSM	ENSG00000182963.11	ENST00000592524.6	7692	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	32.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTTTGTGTTTCCTT	-35	True	NA	-3	True	AATACA	-15	NA	44830287	44798447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44805838_44807393_44807470_44830061
transcript_80065.known	chr17	-	586	3	FSM	ENSG00000182963.11	ENST00000591424.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	79.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGAAGCAGACAAGAAGG	-5	True	NA	NA	False	NA	NA	NA	44830816	44805506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44805838_44807393_44807470_44830637
transcript_80066.nnic	chr17	-	2148	3	NNC	ENSG00000182963.11	novel	7692	3	NA	NA	-271	-271	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	96	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTATTAGGCTAGTG	1095	False	NA	-55	True	ATTAAA	-21	NA	44829965	44804219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_44805838_44807393_44807470_44829511
transcript_8008.known	chr1	+	1777	10	FSM	ENSG00000117399.14	ENST00000372462.1	1777	10	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_2	127.287174103906	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	9	False	NA	55	True	AATAAA	-32	NA	43359012	43363203	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_80080.known	chr17	-	3364	28	FSM	ENSG00000108883.13	ENST00000592576.5	3364	28	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_23	208.392673030602	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTACATTCTGAATATA	-7	True	NA	-62	True	NA	NA	NA	44899431	44850865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883129_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_80081.known	chr17	-	4326	28	FSM	ENSG00000108883.13	ENST00000426333.7	4326	28	0	0	0	0	multi-exon	TRUE	canonical	3	817	junction_16	99.9256513737545	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCTGTTGCATGAT	-21	True	NA	NA	False	NA	NA	NA	44899445	44849947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_80086.known	chr17	-	3045	27	FSM	ENSG00000108883.13	ENST00000402521.7	3045	27	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_26	211.356257195337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGTGAGAGAGGAGCAT	-21	True	NA	NA	False	NA	NA	NA	44899445	44851119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44899368
transcript_8010.nic	chr1	-	1625	9	NIC	ENSG00000066322.15	novel	1466	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	95.3663986947185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	19	False	43368045	-5	True	ATTAAA	-18	NA	43368026	43363400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43366267_43366412_43367914
transcript_80114.known	chr17	+	849	4	FSM	ENSG00000167131.17	ENST00000357776.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.0979218029257	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCAGGTTGACTGATGC	-5	True	NA	NA	False	NA	NA	NA	44899715	44902800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44899844_44900989_44901142_44901519_44901653_44902364
transcript_80117.known	chr17	+	3397	4	FSM	ENSG00000214447.5	ENST00000331733.4	3397	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6.84754619472471	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTGCTTTGCTTTCT	7	True	NA	10	True	NA	NA	NA	44899773	44905390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44899860_44900989_44901142_44901519_44901653_44902364
transcript_8012.known	chr1	-	1215	8	FSM	ENSG00000066322.15	ENST00000470769.5	1215	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	76.4244324646969	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACCTTAGGGCAGTGTC	1458	False	NA	NA	False	NA	NA	NA	43366587	43363874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43366267
transcript_80120.known	chr17	-	594	4	FSM	ENSG00000131095.14	ENST00000585543.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCTTGCTGCCCTAGG	5401	False	NA	NA	False	NA	NA	NA	44911515	44907204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44907389_44908063_44908150_44910614_44910659_44911235
transcript_80125.known	chr17	-	4088	16	FSM	ENSG00000186185.14	ENST00000593135.6	4088	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	53.4742305539157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTCTCTCTGTA	-57	True	NA	-4	True	AATAAA	-15	NA	44947773	44924710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932207_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
transcript_80126.nic	chr17	-	4159	16	NIC	ENSG00000186185.14	novel	4088	16	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	35.4183881934543	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTCTCTCTGTA	NA	False	NA	-4	True	AATAAA	-15	NA	44947808	44924710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
transcript_8013.known	chr1	-	973	8	FSM	ENSG00000066322.15	ENST00000497050.5	973	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	74.7736721100169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATGTATGGCACCATC	307	False	NA	NA	False	NA	NA	NA	43367738	43364049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
transcript_80131.nnic	chr17	-	4361	15	NNC	ENSG00000186185.14	novel	4217	15	NA	NA	-35	0	intron_retention	FALSE	canonical	3	29	junction_3	42.3226793064129	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCTCTCTGTACA	NA	False	NA	-2	True	AATAAA	-17	NA	44947808	44924708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_44926500_44926988_44927079_44928025_44928552_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
transcript_80133.known	chr17	-	4217	15	FSM	ENSG00000186185.14	ENST00000587309.5	4217	15	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_6	15.5964739604822	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCTCTCTGTACA	79	False	NA	-2	True	AATAAA	-17	NA	44947637	44924708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
transcript_8014.known	chr1	-	1466	8	FSM	ENSG00000066322.15	ENST00000372458.8	1466	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	26.1744539736042	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-17	True	NA	-5	True	ATTAAA	-18	NA	43368011	43363400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_80156.known	chr17	+	4881	12	FSM	ENSG00000136448.13	ENST00000258960.7	4881	12	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_10	35.6611694741558	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTCCTGGTATTCCT	2	True	NA	NA	False	AATAAA	-19	NA	45061316	45109016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_80160.nic	chr17	+	409	2	ISM	ENSG00000136448.13	ENST00000585561.5	807	7	-212	15531	-149	-15531	5prime_fragment	FALSE	canonical	3	631	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTGAGACAGATTCAGC	197	False	NA	68	True	AAAAAG	-34	NA	45061121	45081713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_45061461_45081643
transcript_80161.known	chr17	+	3058	13	FSM	ENSG00000136448.13	ENST00000676828.1	3058	13	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	176.05815011587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTGTTTCTAATAAAGA	346	False	NA	NA	False	AATACA	-3	NA	45061270	45108980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618_45105946_45107778
transcript_80162.nnic	chr17	-	2135	6	NIC	ENSG00000172992.13	novel	2027	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	70.0154268715117	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGATTCCCAGACTTGGC	5	True	NA	-14	True	AATAAA	-30	NA	45051680	45023343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45024725_45030091_45030180_45033934_45034043_45034186_45034391_45034773_45035000_45051552
transcript_80163.known	chr17	-	1000	5	FSM	ENSG00000172992.13	ENST00000651974.1	2171	5	13	1158	-1	-760	multi-exon	FALSE	canonical	0	0	junction_4	72.1504504490443	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGGCTCGCTGCCAT	2	True	NA	NA	False	NA	NA	NA	45051619	45024501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051360
transcript_80165.known	chr17	-	990	5	FSM	ENSG00000172992.13	ENST00000452796.7	2027	5	70	967	5	-569	multi-exon	FALSE	canonical	3	58	junction_4	48.0175749075273	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	11	True	NA	NA	False	NA	NA	NA	45051610	45024310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051552
transcript_80166.known	chr17	-	2030	5	FSM	ENSG00000172992.13	ENST00000342350.10	2149	5	113	6	8	0	multi-exon	FALSE	canonical	3	46	junction_4	52.9356921178896	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGATTCCCAGACTTGGC	-6	True	NA	-14	True	AATAAA	-30	NA	45061018	45023343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45060887
transcript_8017.known	chr1	-	1034	8	FSM	ENSG00000066322.15	ENST00000464204.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	83.5322252370977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTTTGGTTCCTCACC	-13	True	NA	NA	False	NA	NA	NA	43368007	43363755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364614_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_80170.known	chr17	-	2122	5	FSM	ENSG00000172992.13	ENST00000310604.9	2112	5	-8	-2	4	0	multi-exon	FALSE	canonical	1	2	junction_4	71.306994748061	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGATTCCCAGACTTG	7	True	NA	-16	True	AATAAA	-28	NA	45061109	45023345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035003_45060887
transcript_80173.known	chr17	-	6132	15	FSM	ENSG00000161714.12	ENST00000619929.5	6132	15	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_6	5.9714456595791	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGGTATTTCCTCCC	-3	True	NA	NA	False	NA	NA	NA	45132515	45108958	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45112705_45112862_45113013_45113121_45113258_45113438_45113606_45114249_45114367_45115093_45115245_45115343_45115491_45116631_45116785_45117993_45118139_45118290_45118493_45118814_45119044_45120324_45120455_45120901_45121131_45121210_45121373_45132247
transcript_80177.nic	chr17	-	3348	14	NIC	ENSG00000161714.12	novel	6132	15	NA	NA	-56	651	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	12.1757349145774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACCGCCACTCCCTGA	653	False	NA	-13	True	AATAAA	-15	NA	45132574	45111651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45112705_45113121_45113258_45113438_45113606_45114249_45114367_45115093_45115245_45115343_45115491_45116631_45116785_45117993_45118139_45118290_45118493_45118814_45119044_45120324_45120455_45120901_45121131_45121210_45121373_45132247
transcript_8018.known	chr1	-	828	7	FSM	ENSG00000066322.15	ENST00000487209.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	74.0714744914217	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTGACCAAGGCTT	-5	True	NA	NA	False	NA	NA	NA	43367999	43363835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365563_43365624_43367914
transcript_80181.known	chr17	+	2026	12	FSM	ENSG00000181513.15	ENST00000431281.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.8885377809965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTCTGCTGTCTGGT	NA	False	NA	8	True	AATAAA	-9	NA	45132599	45144172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45132664_45135340_45135597_45135841_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_80190.known	chr17	+	1827	10	FSM	ENSG00000181513.15	ENST00000321854.13	1827	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	10.2415276638248	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	8	True	NA	12	True	AATAAA	-13	NA	45135686	45144176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_80191.known	chr17	+	1986	9	FSM	ENSG00000181513.15	ENST00000398322.7	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	10.8512672071054	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGGTCCCCTACGG	8	True	NA	17	True	AATAAA	-18	NA	45135686	45144181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_80192.known	chr17	+	1453	10	FSM	ENSG00000181513.15	ENST00000376955.8	1453	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.1240266435113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGACCTTGCTTTCCT	15	True	NA	6	True	NA	NA	NA	45135693	45142959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137922_45137989_45139020_45139161_45142582
transcript_80193.known	chr17	+	1684	9	FSM	ENSG00000181513.15	ENST00000592162.5	1684	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	17.5708387676855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	11	True	NA	12	True	AATAAA	-13	NA	45135689	45144176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45143442
transcript_80194.known	chr17	-	1741	1	FSM	ENSG00000276728.1	ENST00000612013.1	1741	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCGTTCTTTTTATT	1801	False	NA	NA	False	NA	NA	NA	45148470	45146729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45146700_45148500
transcript_80197.nnic	chr17	+	1450	4	NIC	ENSG00000168517.11	novel	1302	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40.9959347578106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	0	True	NA	24	True	ATTAAA	-20	NA	45161077	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_45161249_45162487_45162636_45162749_45162860_45169014
transcript_80198.known	chr17	+	1436	4	FSM	ENSG00000168517.11	ENST00000589230.6	1436	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	33.4697209761633	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-23	True	NA	24	True	ATTAAA	-20	NA	45161874	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45162032_45162487_45162636_45162749_45162860_45169014
transcript_80199.known	chr17	+	1302	3	FSM	ENSG00000168517.11	ENST00000593138.6	1302	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	0	True	NA	24	True	ATTAAA	-20	NA	45161077	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45161249_45162749_45162860_45169014
transcript_80200.known	chr17	+	1438	3	FSM	ENSG00000168517.11	ENST00000586681.6	1438	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	47.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	16	False	NA	24	True	ATTAAA	-20	NA	45161093	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45161401_45162749_45162860_45169014
transcript_80201.nic	chr17	+	2685	3	ISM	ENSG00000168517.11	ENST00000307275.7	1528	4	382	5	4	0	3prime_fragment	FALSE	canonical	3	27	junction_1	35.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	4	True	NA	24	True	ATTAAA	-20	NA	45161081	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_45162636_45162749_45162860_45169014
transcript_80203.known	chr17	+	1246	3	FSM	ENSG00000168517.11	ENST00000592695.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	26.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	19	True	NA	24	True	ATTAAA	-20	NA	45161916	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45162032_45162749_45162860_45169014
transcript_80205.known	chr17	+	3625	1	FSM	ENSG00000186834.4	ENST00000332499.4	3625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCTTCGTGTTTTTT	-1	True	NA	13	True	ATTAAA	-15	NA	45148474	45152099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45148500_45152100
transcript_80206.known	chr17	-	2053	2	FSM	ENSG00000267288.2	ENST00000589796.2	2053	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTGTGTTTCACT	NA	False	NA	2	True	AGTAAA	-20	NA	45171485	45168799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45170331_45170963
transcript_80207.known	chr17	+	1323	4	FSM	ENSG00000168517.11	ENST00000591070.6	1323	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.9959347578106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-2	True	NA	24	True	ATTAAA	-20	NA	45161895	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45161940_45162487_45162636_45162749_45162860_45169014
transcript_80208.known	chr17	+	1176	3	FSM	ENSG00000168517.11	ENST00000591576.5	1176	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	41	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-3	True	NA	24	True	ATTAAA	-20	NA	45161894	45170035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45161940_45162749_45162860_45169014
transcript_80210.known	chr17	-	4442	16	FSM	ENSG00000006062.18	ENST00000344686.8	4442	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	4.09661106552992	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTGTCCTCTCTCTTGCC	17	True	NA	2	True	AATAAA	-32	NA	45317020	45263118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45264801_45265162_45265264_45266536_45266682_45267091_45267199_45267405_45267760_45270412_45270564_45271057_45271222_45273502_45273608_45274122_45274255_45274463_45274594_45284811_45284950_45286430_45287046_45287153_45287365_45289235_45289306_45290489_45290766_45316959
transcript_80212.known	chr17	+	2487	14	FSM	ENSG00000184922.15	ENST00000587489.5	2487	14	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	6.31050593907498	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCGTCGGCTCCATGC	-10	True	NA	15	True	AATAAA	-14	NA	45241074	45247318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45241231_45241381_45241635_45241846_45242147_45242340_45242466_45243117_45243321_45243790_45244026_45244175_45244245_45244818_45244900_45244978_45245109_45245252_45245417_45245631_45245734_45245877_45245974_45246209_45246331_45246866
transcript_80216.known	chr17	+	2175	4	FSM	ENSG00000267278.6	ENST00000655903.1	2175	4	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_2	6.18241233033047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	4	True	NA	-12	True	NA	NA	NA	45247934	45269814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45248004_45255134_45255219_45267112_45267329_45268008
transcript_80217.known	chr17	+	488	3	FSM	ENSG00000267278.6	ENST00000585346.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGGCAGGGGCTGGCT	-3	True	NA	NA	False	NA	NA	NA	45247953	45267466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45248004_45255134_45255219_45267112
transcript_80218.known	chr17	+	2090	3	FSM	ENSG00000267278.6	ENST00000590100.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	5	True	NA	-12	True	NA	NA	NA	45247935	45269814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45248004_45267112_45267329_45268008
transcript_80219.known	chr17	+	2296	3	FSM	ENSG00000267278.6	ENST00000586450.6	2296	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAATGTAAGGAAGTGT	7046	False	NA	-2	True	AATAAA	-2	NA	45262079	45269824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45262344_45267112_45267329_45268008
transcript_80220.known	chr17	-	393	2	FSM	ENSG00000233483.3	ENST00000589518.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	500	False	NA	0	True	TATAAA	-21	NA	45247843	45247266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45247517_45247700
transcript_80229.known	chr17	-	3628	17	FSM	ENSG00000159314.12	ENST00000376922.6	3628	17	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_11	7.9912061042123	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	-2	True	NA	-8	True	AATAAA	-18	NA	45425631	45393908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45425563
transcript_80230.nic	chr17	-	3698	17	NIC	ENSG00000159314.12	novel	3628	17	NA	NA	-241	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	12.8754550890444	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	7052	False	NA	-8	True	AATAAA	-18	NA	45425872	45393908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45404923_45405107_45405846_45406084_45425563
transcript_80232.nic	chr17	-	3765	17	NIC	ENSG00000159314.12	novel	3628	17	NA	NA	-241	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_14	12.1138802103207	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	7052	False	NA	-8	True	AATAAA	-18	NA	45425872	45393908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45405027_45405107_45405675_45406084_45425563
transcript_80238.nic	chr17	-	3803	16	NIC	ENSG00000159314.12	novel	3628	17	NA	NA	-241	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	7.92184041467357	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	7052	False	NA	-8	True	AATAAA	-18	NA	45425872	45393908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45425563
transcript_80239.known	chr17	-	2604	16	FSM	ENSG00000159314.12	ENST00000532891.6	2604	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_15	11.5700763466222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTGTGACTGGGG	2645	False	NA	NA	False	NA	NA	NA	45430279	45395455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45429622
transcript_80241.nic	chr17	-	3553	16	NIC	ENSG00000159314.12	novel	3628	17	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	12.4089573382385	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	7198	False	NA	-8	True	AATAAA	-18	NA	45425726	45393908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45405027_45405107_45405675_45406084_45425563
transcript_80253.nnic	chr17	-	3704	15	NIC	ENSG00000159314.12	novel	3628	17	NA	NA	-241	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	12.1925453973035	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	7052	False	NA	-8	True	AATAAA	-18	NA	45425872	45393908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45425563
transcript_80263.known	chr17	-	5240	12	FSM	ENSG00000225190.11	ENST00000430334.8	5240	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	8.86631661108117	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTGGCTTCTGAATTC	-12	True	NA	0	True	AGTAAA	-20	NA	45490721	45435899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45437970_45439476_45439635_45440162_45440227_45445469_45445664_45450617_45450764_45453354_45454273_45458168_45458440_45468208_45468594_45475099_45475727_45477899_45478148_45482436_45482526_45490651
transcript_80266.known	chr17	-	3292	11	FSM	ENSG00000225190.11	ENST00000581448.5	3292	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	13.8351002887583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGTTTTTCCCATTCAT	16	False	NA	-28	True	ATTAAA	-17	NA	45490729	45437470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45437970_45439476_45439635_45440162_45440227_45445469_45445664_45450617_45450764_45453354_45454273_45458168_45458440_45475099_45475727_45477899_45478148_45482436_45482526_45490651
transcript_80270.nic	chr17	-	3079	7	ISM	ENSG00000225190.11	ENST00000430334.8	5240	12	-54	17038	-26	0	5prime_fragment	FALSE	canonical	3	31	junction_2	10.3722385883344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGCTGTCCAATAGAA	NA	False	NA	-3	True	TATAAA	-16	NA	45490775	45452937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_45454273_45458168_45458440_45468208_45468594_45475099_45475727_45477899_45478148_45482436_45482526_45490651
transcript_80277.known	chr17	+	546	4	FSM	ENSG00000204650.14	ENST00000585118.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	56.3461523876199	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGAAGGCCTGAACTGG	-12	True	NA	NA	False	NA	NA	NA	45620327	45636394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45636282
transcript_80278.known	chr17	+	9678	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_3	96.8813707582629	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTGCCAGAGAATTT	0	True	NA	NA	False	AATAAA	-19	NA	45620339	45655156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
transcript_80281.known	chr17	+	758	4	FSM	ENSG00000204650.14	ENST00000580220.2	758	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	83.7230885452487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGAAACTGGCACATTC	1568	False	NA	NA	False	NA	NA	NA	45621907	45636344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45622042_45627375_45627683_45629903_45630159_45636282
transcript_80285.known	chr17	+	2537	13	FSM	ENSG00000120088.15	ENST00000314537.10	2537	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.13138237134266	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAAGGCCTGGACTCC	-7	True	NA	9	True	TATAAA	-25	NA	45784319	45835828	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45784578_45807009_45807098_45816462_45816583_45821354_45821441_45829214_45829322_45830093_45830215_45830416_45830571_45830879_45830941_45833137_45833211_45833451_45833538_45833713_45833850_45834006_45834049_45834623
transcript_80286.known	chr17	-	5574	15	FSM	ENSG00000120071.15	ENST00000432791.7	5574	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	18.5248041108925	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	-4	True	NA	-14	True	AATAAA	-17	NA	46193429	46029915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
transcript_80287.known	chr17	-	5309	15	FSM	ENSG00000120071.15	ENST00000262419.10	5309	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	25.2203554005611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAAATTGAAAAAAA	4	True	NA	-54	True	NA	NA	NA	46192800	46029955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192418
transcript_80290.known	chr17	-	1717	5	FSM	ENSG00000120071.15	ENST00000639356.1	1717	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	55.8166641783616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTTAGTGTGTGTCA	-4	True	NA	NA	False	AATAAA	-21	NA	46225367	46148124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46148240_46152903_46152967_46170854_46172233_46223670_46223805_46225340
transcript_80291.known	chr17	+	517	2	FSM	ENSG00000214401.5	ENST00000398275.5	527	2	8	2	8	-2	multi-exon	FALSE	canonical	3	41	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGAGTTCTAATGTT	-8	True	NA	1	True	AATAAA	-15	NA	46193575	46196721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46193739_46196367
transcript_80292.nnic	chr17	+	1967	4	Antisense	novelGene_ENSG00000262539.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5.90668171555645	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGGTCTTTCTGTAAC	NA	False	NA	22	True	AATAAA	-19	NA	46247397	46261233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr17_+_46247498_46248084_46248160_46258042_46258178_46259576
transcript_80294.nnic	chr17	+	1832	3	Antisense	novelGene_ENSG00000262539.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGGTCTTTCTGTAAC	NA	False	NA	22	True	AATAAA	-19	NA	46247397	46261233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr17_+_46247498_46248084_46248160_46259576
transcript_80297.known	chr17	+	483	1	FSM	ENSG00000261575.3	ENST00000570002.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAACTGAGCTGAATG	-7	True	NA	9	True	AATAAA	-24	NA	46267036	46267519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46267000_46267500
transcript_80298.known	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.974115859463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	27	False	NA	NA	False	NA	NA	NA	46361718	46330452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_803.known	chr1	-	837	3	FSM	ENSG00000160087.21	ENST00000461142.3	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGACTACCAAGGCTGATC	7	True	NA	NA	False	GGGGCT	-40	NA	1273837	1262852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1263387_1267861_1267993_1273665
transcript_80300.known	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	24.0878023535196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
transcript_80303.known	chr17	-	524	4	FSM	ENSG00000185829.18	ENST00000622488.6	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	71.5122367151245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGTGATCTTGGCT	8	False	NA	NA	False	NA	NA	NA	46579673	46528684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46528860_46570758_46570870_46576174_46576340_46579600
transcript_80304.known	chr17	-	5242	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	23.6220236220354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46579691	46552755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
transcript_80308.known	chr17	+	3983	21	FSM	ENSG00000073969.18	ENST00000398238.8	3983	21	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_18	34.284690460904	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	17	True	AATAAA	-20	NA	46590668	46757464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
transcript_80313.known	chr17	-	3287	5	FSM	ENSG00000108379.10	ENST00000225512.6	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.78564169540279	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACATTGTACACTGTG	-3	True	NA	-12	True	ATTAAA	-23	NA	46818692	46762505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46764622_46768311_46768800_46769782_46770049_46773667_46773910_46818517
transcript_80316.known	chr17	+	1115	7	FSM	ENSG00000108433.17	ENST00000573224.2	1115	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	101.481799134404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	-18	True	NA	26	True	ATTAAA	-19	NA	46923127	46967000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533
transcript_80317.known	chr17	+	2683	6	FSM	ENSG00000108433.17	ENST00000638374.1	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	110.362312407814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCAGAGGTGGTTTT	18	True	NA	NA	False	NA	NA	NA	46923163	46940779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_80324.known	chr17	+	3574	6	FSM	ENSG00000108433.17	ENST00000638216.1	3574	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	108.558924091942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGTCACCCAGGC	0	True	NA	NA	False	TTTAAA	-42	NA	46923145	46941600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_80328.known	chr17	+	3929	6	FSM	ENSG00000108433.17	ENST00000640443.1	3929	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.535150064324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCACCCAGGCTGGAGT	14	True	NA	NA	False	NA	NA	NA	46923159	46941606	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923633_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_80329.known	chr17	+	885	5	FSM	ENSG00000108433.17	ENST00000639031.1	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	122.569113156619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTGTATTTTAGT	52	False	NA	NA	False	NA	NA	NA	46923197	46935586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028
transcript_8033.known	chr1	-	867	6	FSM	ENSG00000066322.15	ENST00000470968.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	94.6648826122971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTACAGGGACCACGG	20	False	43368045	NA	False	NA	NA	NA	43368025	43363770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_80331.known	chr17	+	3808	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	143.398919103318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	-8	True	NA	8	True	AATAAA	-20	NA	46923137	46942019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
transcript_80336.known	chr17	+	2190	5	FSM	ENSG00000108433.17	ENST00000640269.1	2190	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	120.471988445447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGATCTCTGATGGCA	14	True	NA	-6	True	AATACA	-8	NA	46923159	46936801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_80337.known	chr17	+	2367	5	FSM	ENSG00000108433.17	ENST00000639287.1	2367	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.0887185161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTGGCTGAAAATGAA	20	True	NA	NA	False	GGGGCT	-29	NA	46923165	46936621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923633_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_80338.known	chr17	+	1425	4	FSM	ENSG00000108433.17	ENST00000640007.1	1425	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	135.450688034018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTCTTCCTGGTCAT	15	True	NA	14	True	AATAAA	-16	NA	46923160	46933262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931104_46931208_46932066
transcript_80342.known	chr17	+	817	4	FSM	ENSG00000108433.17	ENST00000571048.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	143.710356852478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGGGGCTGGAGTTCAGA	20	True	NA	NA	False	NA	NA	NA	46923165	46932242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923633_46929519_46929585_46931098_46931208_46932066
transcript_80344.known	chr17	+	2679	3	FSM	ENSG00000108433.17	ENST00000640709.1	2679	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTTTTTTTTTTTGGA	-8	True	NA	NA	False	AAGAAA	-11	NA	46923137	46933628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098
transcript_80347.known	chr17	-	2979	5	FSM	ENSG00000262879.6	ENST00000653193.1	2979	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.59807621135332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACTCCATCTC	-6	True	NA	NA	False	NA	NA	NA	47067537	47016148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47018466_47021581_47021722_47033277_47033382_47056459_47056754_47067413
transcript_80348.known	chr17	-	1394	5	FSM	ENSG00000262879.6	ENST00000661492.1	1394	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.23606797749979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTGTGGATAATTGGCG	6	True	NA	NA	False	NA	NA	NA	47067525	47017713	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47018466_47021581_47021722_47054117_47054214_47056459_47056754_47067413
transcript_80349.known	chr17	-	1098	1	FSM	ENSG00000179673.5	ENST00000322329.5	1098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCGCCTGTGAGGTGTGT	-4	True	NA	-6	True	AATAAA	-33	NA	46979253	46978155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46978200_46979300
transcript_80351.known	chr17	-	2579	19	FSM	ENSG00000004897.12	ENST00000527547.5	2579	19	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	23.1882393562867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTCTGTATACTGAGT	109	False	NA	NA	False	NA	NA	NA	47189224	47120879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_80352.known	chr17	-	3177	19	FSM	ENSG00000004897.12	ENST00000531206.5	3177	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	39.0654721091543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGATCATTGTTGTCTT	157	False	NA	-5	True	NA	NA	NA	47189176	47120254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_80354.known	chr17	-	2570	18	FSM	ENSG00000004897.12	ENST00000533415.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	42.0786872056985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGCAATATTTAGCTG	30	True	NA	NA	False	AATGAA	-2	NA	47189251	47120770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47181561_47181638_47189145
transcript_80355.nic	chr17	-	1371	11	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-88	21496	-17	52	5prime_fragment	FALSE	canonical	3	100	junction_3	21.822236365689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAACTAATAAAGGAGGA	21	False	47189333	NA	False	ATTAAA	-42	NA	47189312	47142375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_80358.nic	chr17	-	1310	10	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-88	23003	-17	0	5prime_fragment	FALSE	canonical	3	100	junction_2	22.0442876338509	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTAAAGATTTCTGTA	21	False	47189333	NA	False	NA	NA	NA	47189312	47143882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_80360.known	chr17	+	850	8	FSM	ENSG00000198336.9	ENST00000572316.5	850	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	9.34595841931207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCTCTGGGATTCTG	-21	True	NA	18	True	AATAAA	-18	NA	47209034	47223658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47209092_47209388_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_80361.known	chr17	+	855	7	FSM	ENSG00000198336.9	ENST00000393450.5	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	4.29793231940921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTCTGTTTTGTTTGT	-1	True	NA	39	True	AATAAA	-39	NA	47209347	47223679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_80363.nnic	chr17	-	731	4	FSM	ENSG00000228782.8	ENST00000691039.1	736	4	0	5	0	-5	multi-exon	FALSE	canonical	3	22	junction_1	64.8913622055269	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTCCTGCTTAGAACT	-1	False	NA	-5	True	AATAAA	-16	NA	47492492	47488631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47488956_47490165_47490296_47491014_47491193_47492393
transcript_80369.known	chr17	+	4226	24	FSM	ENSG00000141279.17	ENST00000677370.1	4226	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	173.19792102901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATGTGAAACTGATGT	14	False	NA	15	True	AATAAA	-3	NA	47531268	47623259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619277_47619373_47619736_47619785_47621767
transcript_80372.known	chr17	+	4309	23	FSM	ENSG00000141279.17	ENST00000322157.9	4309	23	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_7	69.660807482928	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATTCACTTTATTC	1	True	NA	32	True	AATAAA	-20	NA	47531107	47623276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
transcript_80383.known	chr17	+	4252	22	FSM	ENSG00000141279.17	ENST00000678461.1	4252	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	139.512465002796	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTCCTGATTCACTT	1	True	NA	27	True	AATAAA	-15	NA	47531107	47623271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585746_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
transcript_8039.known	chr1	-	1968	7	FSM	ENSG00000159479.17	ENST00000372457.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	23.9263917509979	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-10	True	NA	-14	True	AATAAA	-15	NA	43389800	43383916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_80394.known	chr17	+	1344	9	FSM	ENSG00000141279.17	ENST00000528751.6	1344	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	215.916614402412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAACTGTTCTAAAATT	14	False	NA	NA	False	NA	NA	NA	47531268	47587556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586250_47586364_47586399_47587229
transcript_80395.known	chr17	-	442	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	29	315	-4	-315	multi-exon	FALSE	canonical	3	14	junction_1	7.78888096369861	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCAGAATATTTTCACA	6	True	NA	NA	False	NA	NA	NA	47649420	47621841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
transcript_80400.known	chr17	+	6182	23	FSM	ENSG00000108424.11	ENST00000583648.6	6182	23	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	311.652328009465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	43	False	NA	24	True	AATAAA	-24	NA	47649494	47685505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47649878_47650177_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_80403.known	chr17	+	6058	22	FSM	ENSG00000108424.11	ENST00000290158.9	6058	22	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	176.679732542124	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	6	True	NA	24	True	AATAAA	-24	NA	47649918	47685505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_80415.known	chr17	+	2989	21	FSM	ENSG00000108424.11	ENST00000540627.5	2989	21	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	318.893442234236	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGAAAGTT	131	False	NA	-19	True	AAAACA	-17	NA	47651195	47682680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47651377_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_8043.known	chr1	-	1483	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	67.3740699833582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	3	True	NA	-14	True	AATAAA	-15	NA	43389808	43383916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_80442.known	chr17	-	3664	23	FSM	ENSG00000006025.12	ENST00000007414.8	3664	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	4.52928943764001	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTGTGACCATTCA	-8	True	NA	-5	True	AATAAA	-13	NA	47821794	47807371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47808400_47808537_47808661_47808863_47808991_47809075_47809221_47809333_47809479_47810593_47810673_47810771_47810836_47813265_47813404_47813586_47813835_47814520_47814615_47815214_47815353_47816106_47816203_47816387_47816483_47816562_47816696_47816779_47816873_47817255_47817360_47818268_47818387_47818505_47818617_47818985_47819100_47819728_47819783_47819970_47820097_47820203_47820366_47821665
transcript_8045.known	chr1	-	1025	9	FSM	ENSG00000178922.18	ENST00000372434.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	24.8517479264538	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATGTCTCTGTAATGG	3	True	NA	-3	True	ATTAAA	-19	NA	43453825	43451153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
transcript_80456.known	chr17	-	1622	6	FSM	ENSG00000159111.13	ENST00000414011.1	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	346.027397759195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTTATAATAAAATGAA	-6	True	NA	-51	True	NA	NA	NA	47831534	47823489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138_47829237_47831459
transcript_80457.known	chr17	-	1576	5	FSM	ENSG00000159111.13	ENST00000421763.5	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	308.842192713366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACCCAGAAGTGGGTCC	-2	True	NA	NA	False	NA	NA	NA	47831530	47823582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831310
transcript_80458.known	chr17	-	1749	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	77.5258021564434	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACGTGTCTCTGGTGGT	-13	True	NA	-3	True	ATTAAA	-25	NA	47831541	47823271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
transcript_80465.nic	chr17	-	1529	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_7	99.8570406702931	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-8	True	NA	-15	True	AATAAA	-15	NA	47841283	47837691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_80466.known	chr17	-	1496	8	FSM	ENSG00000141295.14	ENST00000290216.14	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_7	54.79162754454	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	2	True	NA	-15	True	AATAAA	-15	NA	47841273	47837691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_80468.known	chr17	-	1477	8	FSM	ENSG00000141295.14	ENST00000581645.5	1477	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	116.186338724148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCTTTATTTTCTCTT	9917	False	NA	-31	True	NA	NA	NA	47841247	47837707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838720_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_8047.known	chr1	-	1066	8	FSM	ENSG00000178922.18	ENST00000372432.5	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.1226552813313	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	-7	True	NA	-7	True	ATTAAA	-15	NA	43453963	43451157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453385_43453498_43453594
transcript_80471.nic	chr17	-	1472	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	106.408531190897	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	9821	False	NA	-43	True	NA	NA	NA	47841343	47837719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_80475.known	chr17	-	1745	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	42.3034671549902	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	9991	False	NA	-30	True	NA	NA	NA	47841173	47837706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_8048.known	chr1	-	796	8	FSM	ENSG00000178922.18	ENST00000372433.5	796	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	22.3889550029127	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATGTCTCTGTAATGG	891	False	NA	-3	True	ATTAAA	-19	NA	43453716	43451153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453412_43453498_43453594
transcript_80488.nic	chr17	-	1796	7	NIC	ENSG00000141295.14	novel	1779	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	69	junction_6	105.095855717002	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-8	True	NA	-15	True	AATAAA	-15	NA	47841283	47837691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_80489.known	chr17	-	1779	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	48.5168928198096	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-14	True	NA	-15	True	AATAAA	-15	NA	47841289	47837691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_80495.nic	chr17	-	1754	7	NIC	ENSG00000141295.14	novel	1745	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_1	111.038656932319	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	14	True	NA	-43	True	NA	NA	NA	47841261	47837719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_80514.nic	chr17	-	2115	6	ISM	ENSG00000141295.14	ENST00000407215.7	1779	7	28	0	0	0	intron_retention	FALSE	canonical	3	338	junction_3	9.69535971483266	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	14	True	NA	-15	True	AATAAA	-15	NA	47841261	47837691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_80515.known	chr17	-	952	6	FSM	ENSG00000141295.14	ENST00000579856.5	952	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	134.840646690825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGACACCAGGCAGCCC	10	True	NA	NA	False	NA	NA	NA	47841265	47838312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840669_47840844_47841207
transcript_80517.nic	chr17	-	2328	6	NIC	ENSG00000141295.14	novel	1779	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	222	junction_5	52.7446679769624	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-16	True	NA	-15	True	AATAAA	-15	NA	47841291	47837691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47840373_47840669_47840844_47841207
transcript_8052.nic	chr1	-	2301	7	NIC	ENSG00000178922.18	novel	1066	8	NA	NA	-143	0	intron_retention	FALSE	canonical	3	54	junction_2	7.49258893099634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	475	False	NA	-7	True	ATTAAA	-15	NA	43454132	43451157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43453498_43453594
transcript_80574.known	chr17	-	912	3	FSM	ENSG00000141295.14	ENST00000578840.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	143.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTTGGCCCTCT	9941	False	NA	NA	False	NA	NA	NA	47841223	47839673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47840373_47840669_47840844_47841184
transcript_80575.known	chr17	-	717	3	FSM	ENSG00000141295.14	ENST00000580428.1	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	67	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGGGCTCAGGACACTT	-4	True	NA	NA	False	TATAAA	-40	NA	47841279	47839901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47840373_47840669_47840844_47841207
transcript_80577.known	chr17	-	3824	2	FSM	ENSG00000189120.5	ENST00000536300.2	3824	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTGTGTTCCAGCTC	1	True	NA	-4	True	AATAAA	-19	NA	47851163	47844907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47848487_47850918
transcript_80578.known	chr17	-	522	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	25	10	4	0	multi-exon	FALSE	canonical	3	19	junction_2	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCATAACTGGTGC	446	False	NA	NA	False	ATTAAA	-43	NA	47895812	47891228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47891582_47893899_47893959_47895702
transcript_80579.known	chr17	-	374	2	FSM	ENSG00000264920.3	ENST00000577279.2	470	2	47	49	23	-46	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCTTCA	15	True	NA	NA	False	NA	NA	NA	47895769	47891274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47891582_47895702
transcript_80582.known	chr17	+	3026	7	FSM	ENSG00000167182.16	ENST00000376741.5	3026	7	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	35.3270434653114	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTTCGGCTTCCTT	-1	True	NA	12	True	AATAAA	-28	NA	47896235	47928957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47896294_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723
transcript_80591.known	chr17	+	1862	14	FSM	ENSG00000108465.15	ENST00000584991.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	172.782895548381	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGGACTTAATAAAAGAGG	11	True	NA	-4	True	NA	NA	NA	47971048	47981741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974036_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_80616.nic	chr17	+	2882	12	NIC	ENSG00000108465.15	novel	1862	14	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_4	175.295594509804	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	NA	False	NA	36	True	AATAAA	-26	NA	47970993	47981781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_80625.nic	chr17	+	3080	11	NIC	ENSG00000108465.15	novel	1862	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	183.131892361762	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	-5	True	NA	36	True	AATAAA	-26	NA	47971075	47981781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_47971153_47971361_47971408_47973518_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_80640.known	chr17	+	3417	7	FSM	ENSG00000108439.11	ENST00000642017.2	3417	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	2.98607881119482	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTCAACCCGGCCTG	-9	True	NA	30	True	AATAAA	-23	NA	47941570	47949308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_80642.known	chr17	+	3232	7	FSM	ENSG00000108439.11	ENST00000641709.1	3232	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17.0782512765993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTAGGCTGTGCCGTTT	-56	True	NA	NA	False	NA	NA	NA	47941523	47949113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47941814_47943342_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_80645.known	chr17	+	1196	6	FSM	ENSG00000108439.11	ENST00000434554.7	1196	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.5105375394665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAAGCTTAGTCCTAGC	-9	True	NA	NA	False	NA	NA	NA	47941570	47947141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945860_47945990_47946322_47946394_47946613
transcript_80646.known	chr17	+	1372	6	FSM	ENSG00000108439.11	ENST00000582171.6	1372	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.4874318472189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTTTTTTTT	16	True	NA	NA	False	AAAACA	-20	NA	47941595	47947413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47941814_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_80647.known	chr17	-	1524	2	FSM	ENSG00000167183.3	ENST00000300557.3	1524	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTTCAAGCTTCAG	-26	True	NA	NA	False	AGTAAA	-20	NA	47957883	47951966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47953264_47957656
transcript_80648.known	chr17	+	2759	12	FSM	ENSG00000108465.15	ENST00000584063.5	2759	12	0	0	0	0	multi-exon	FALSE	canonical	2	399	junction_4	82.9907890936107	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	23	False	NA	27	True	AATAAA	-17	NA	47971103	47981772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_80649.known	chr17	+	2519	13	FSM	ENSG00000108465.15	ENST00000585163.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	2	351	junction_6	96.0538043667888	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	8	True	NA	23	True	AATAAA	-13	NA	47971124	47981768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_80650.known	chr17	+	1834	14	FSM	ENSG00000108465.15	ENST00000338399.9	1834	14	0	0	0	0	multi-exon	FALSE	canonical	2	326	junction_5	107.10554436226	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	-4	True	NA	36	True	AATAAA	-26	NA	47971112	47981781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_8066.known	chr1	+	7720	34	FSM	ENSG00000142949.17	ENST00000359947.9	7720	34	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	234.453106085563	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGACTCTGTCTCAGCTG	3	True	NA	18	True	AATAAA	-26	NA	43530882	43623666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730_43589001_43590971_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43602070_43602098_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
transcript_80664.known	chr17	+	4390	6	FSM	ENSG00000082641.16	ENST00000585291.5	4390	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	99.8466824686729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTTTTTCCCCACTTT	-2	True	NA	-1	True	AATAAA	-25	NA	48048362	48061487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048463_48050606_48050820_48051116_48051629_48056385_48056599_48057343_48057503_48058294
transcript_80668.known	chr17	+	4839	6	FSM	ENSG00000082641.16	ENST00000362042.8	4839	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	94.0370139891734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGACTGGCCATTGCGT	-6	True	NA	28	True	AATAAA	-19	NA	48048358	48061545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057031_48057122_48057343_48057503_48058294
transcript_80682.known	chr17	+	4729	6	FSM	ENSG00000082641.16	ENST00000361665.7	4729	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	106.900701587969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAGTGCACTTTTTCC	408	False	NA	-8	True	AATAAA	-18	NA	48048772	48061480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048865_48050606_48051629_48056418_48056599_48057031_48057122_48057343_48057503_48058294
transcript_80684.known	chr17	+	4672	5	FSM	ENSG00000082641.16	ENST00000357480.9	4672	5	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	38.8651514856176	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	5	True	NA	-9	True	AATAAA	-17	NA	48048369	48061479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057343_48057503_48058294
transcript_80700.known	chr17	+	588	5	FSM	ENSG00000082641.16	ENST00000584634.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	117.239871630772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGCCCCTCCTGGAGAC	20	False	NA	NA	False	NA	NA	NA	48054549	48058331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48054639_48056385_48056599_48057031_48057122_48057343_48057503_48058294
transcript_80720.known	chr17	+	2172	4	FSM	ENSG00000082641.16	ENST00000536222.5	2172	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	111.547697819762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTTTGAAGCCCACCA	9	True	NA	NA	False	NA	NA	NA	48054709	48059653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48055151_48056385_48056599_48057343_48057503_48058294
transcript_80724.known	chr17	+	2051	4	FSM	ENSG00000082641.16	ENST00000583378.5	2051	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	124.340929169227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCCGACAGAGGGGAA	-9	True	NA	NA	False	NA	NA	NA	48054691	48059936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48054762_48056418_48056599_48057343_48057503_48058294
transcript_80727.known	chr17	+	1998	4	FSM	ENSG00000082641.16	ENST00000582155.5	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	114.737381296013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGGCCAGACCATTTA	102	False	NA	NA	False	NA	NA	NA	48054674	48059833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48054762_48056385_48056599_48057343_48057503_48058294
transcript_80731.known	chr17	+	583	4	FSM	ENSG00000082641.16	ENST00000577431.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	125.257956056913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATCAGCAAGTGAAATC	219	False	NA	NA	False	NA	NA	NA	48054919	48058307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48055151_48056418_48056599_48057343_48057503_48058294
transcript_80733.known	chr17	+	583	4	FSM	ENSG00000082641.16	ENST00000580037.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	128.929782784618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTCCCTGGGGGGCTGCA	-14	True	NA	NA	False	NA	NA	NA	48055951	48058416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48056041_48056385_48056599_48057343_48057503_48058294
transcript_80743.known	chr17	-	2422	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	251.1527174848	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTAAGTCTTACC	-14	True	NA	-7	True	AATAAA	-23	NA	48101198	48070051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
transcript_80744.known	chr17	-	578	5	FSM	ENSG00000108468.15	ENST00000402583.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.195241382095	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGCTGACGTGGCATT	141	False	NA	NA	False	NA	NA	NA	48101302	48071498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48071580_48075005_48075101_48075988_48076179_48076864_48077042_48101267
transcript_80748.nic	chr17	-	581	3	ISM	ENSG00000108468.15	ENST00000495350.5	550	4	-212	1081	-21	-918	5prime_fragment	FALSE	canonical	3	638	junction_2	7	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTAAGAATAGAAGT	-56	False	NA	NA	False	AAGAAA	-1	NA	48101499	48076006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_48076179_48076864_48077042_48101267
transcript_80750.nic	chr17	-	296	2	ISM	ENSG00000108468.15	ENST00000495350.5	550	4	-212	2052	-21	-1889	5prime_fragment	FALSE	canonical	3	638	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGGAGGTGCTAGAAGA	-56	False	NA	NA	False	AAGAAA	-1	NA	48101499	48076977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_48077042_48101267
transcript_80751.known	chr17	+	2733	8	FSM	ENSG00000002919.15	ENST00000393405.6	2733	8	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	57.7432741909022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGGTATTCATCC	15	False	NA	10	True	AATAAA	-24	NA	48107557	48123074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48107839_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_80753.known	chr17	+	2992	7	FSM	ENSG00000002919.15	ENST00000359238.7	2992	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	13.30935343617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCTCAGTTAATCTA	-8	True	NA	NA	False	NA	NA	NA	48107765	48123601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48107839_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_80754.known	chr17	+	1282	7	FSM	ENSG00000002919.15	ENST00000582104.5	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	44.9172077889483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTTATGTTGTATCC	14	True	NA	NA	False	NA	NA	NA	48107787	48121887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48107839_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_80755.known	chr17	-	3039	2	FSM	ENSG00000159184.8	ENST00000290295.8	3039	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGAATCTTAGAGATT	-4	True	NA	NA	False	AATAAA	-17	NA	48728750	48724762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48727044_48727992
transcript_80756.known	chr17	-	3573	16	FSM	ENSG00000170703.16	ENST00000393382.8	3573	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2.2647050335284	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGAGCCTGATTTGG	-5	True	NA	1	True	AATAAA	-24	NA	48817229	48762233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48762974_48768988_48769255_48769727_48770098_48784922_48785202_48786163_48786336_48787810_48788000_48789930_48790107_48791377_48791604_48796060_48796147_48797060_48797205_48799603_48799761_48801254_48801386_48801524_48801644_48803890_48803929_48804771_48804992_48816969
transcript_80758.known	chr17	+	3635	13	FSM	ENSG00000136436.15	ENST00000258947.8	3635	13	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_1	11.7008427996543	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTTTTTTGAGACAG	-2	True	NA	NA	False	AGTAAA	-5	NA	48831034	48865245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_80766.known	chr17	+	3084	7	FSM	ENSG00000159202.18	ENST00000360943.10	3084	7	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	23.4236347876812	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAAGTGCCTGTGGGTG	0	True	NA	8	True	AATAAA	-17	NA	48908406	48929056	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48908821_48910807_48910881_48912833_48913022_48916075_48916188_48921159_48921273_48922846_48922938_48926963
transcript_80772.known	chr17	+	598	5	FSM	ENSG00000159199.14	ENST00000355938.9	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	380.723899302368	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	NA	False	NA	38	True	ATTAAA	-18	NA	48892764	48895871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_80773.known	chr17	+	539	5	FSM	ENSG00000159199.14	ENST00000503641.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1071.53006840686	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	6	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895182_48895335_48895654
transcript_80774.known	chr17	+	646	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	1006.11704090528	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	-4	True	NA	38	True	ATTAAA	-18	NA	48892786	48895871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_80777.known	chr17	+	359	4	FSM	ENSG00000159199.14	ENST00000514808.5	359	4	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	439.360393703797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCATCTCCCACTGTA	11	True	NA	NA	False	NA	NA	NA	48892801	48895349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155
transcript_80783.known	chr17	+	2214	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	-2	True	NA	35	True	ATTAAA	-15	NA	48892766	48895868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48895335_48895654
transcript_80788.known	chr17	+	759	4	FSM	ENSG00000159199.14	ENST00000513781.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1287.00228783359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAACCCCTGTCTG	8	True	NA	28	True	ATTAAA	-8	NA	48892853	48895861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48893126_48894348_48894450_48895155_48895335_48895654
transcript_80789.known	chr17	-	1051	9	FSM	ENSG00000159210.10	ENST00000510558.6	1051	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	710.159038085836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTTCCCTCATTCT	7	True	NA	32	True	AATAGA	-17	NA	48944806	48930370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48930613_48931642_48931718_48933204_48933347_48934478_48934577_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_80794.known	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	534.014828197396	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	3	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_80799.known	chr17	-	700	7	FSM	ENSG00000159210.10	ENST00000576353.5	700	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	618.002809234895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAGGCCAGAGAAGCC	-12	True	NA	-101	True	NA	NA	NA	48944825	48930503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48930613_48931642_48931718_48933204_48933347_48936169_48936243_48937019_48937125_48943924_48943976_48944680
transcript_8080.known	chr1	+	6377	33	FSM	ENSG00000142949.17	ENST00000438120.5	6377	33	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_7	122.964664004542	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTAGCCTCTTCCCTCT	10	True	NA	10	True	AATACA	-21	NA	43530889	43622357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730_43589001_43590971_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
transcript_80809.known	chr17	-	863	5	FSM	ENSG00000159210.10	ENST00000512243.5	863	5	0	0	0	0	multi-exon	FALSE	canonical	3	1502	junction_2	89.997222179354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATATAGTCTTTTTTTT	4810	False	NA	NA	False	NA	NA	NA	48944708	48935702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_80810.known	chr17	-	445	4	FSM	ENSG00000159210.10	ENST00000510195.1	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	1502	junction_1	97.2362529558235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTCTGGACTTCTCTG	7	True	NA	NA	False	NA	NA	NA	48944806	48936995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48937125_48940923_48941063_48943924_48943976_48944680
transcript_80817.known	chr17	+	8796	15	FSM	ENSG00000159217.10	ENST00000290341.8	8796	15	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_10	103.841642584725	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	0	True	NA	23	True	AATAAA	-24	NA	48997384	49056145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043966_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
transcript_80831.known	chr17	+	768	6	FSM	ENSG00000159217.10	ENST00000515586.5	768	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	466.140922897786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAAGAAAAAAACAAAACA	97	False	NA	NA	False	NA	NA	NA	48997762	49036933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49036549
transcript_80836.known	chr17	+	1629	8	FSM	ENSG00000108798.9	ENST00000225941.6	1629	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.81725406168211	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGTGTGTGGTGTG	-2	True	NA	5	True	NA	NA	NA	49210706	49223225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49210842_49216530_49216699_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_80841.known	chr17	+	1718	8	FSM	ENSG00000108798.9	ENST00000419580.6	1718	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.3908463611752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCAGGAGGGATTGAAA	9	True	NA	NA	False	AATAAA	-36	NA	49210410	49223036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49210842_49216530_49216681_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_80842.known	chr17	-	2071	3	FSM	ENSG00000173868.12	ENST00000310544.9	2071	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGACTGAGATCTCTCT	3	True	NA	NA	False	TATAAA	-17	NA	49230787	49223365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49225005_49226646_49226759_49230467
transcript_80845.known	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	1533.3864483554	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-3	True	NA	-32	True	AATAAA	-4	NA	49414884	49404071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
transcript_80850.known	chr17	-	1885	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	1361.07224887831	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	38	False	NA	-32	True	AATAAA	-4	NA	49414858	49404071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
transcript_80851.known	chr17	-	1834	7	FSM	ENSG00000167085.13	ENST00000300408.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	3120	junction_6	286.33119906073	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-1	True	NA	-12	True	AATAAA	-24	NA	49414882	49404051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_80858.known	chr17	-	4017	6	FSM	ENSG00000167085.13	ENST00000508009.6	4017	6	0	0	0	0	multi-exon	FALSE	canonical	3	3120	junction_5	243.19983552626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-2	True	NA	-32	True	AATAAA	-4	NA	49414898	49404071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_80868.known	chr17	+	3408	6	FSM	ENSG00000064300.9	ENST00000172229.8	3408	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.36348484585429	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACAAAGAGATTTTCTG	0	True	NA	7	True	ATTAAA	-18	NA	49495292	49515008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49495484_49502062_49502205_49506298_49506659_49510411_49510665_49511891_49512053_49512707
transcript_80872.known	chr17	+	5635	2	FSM	ENSG00000182575.8	ENST00000328741.6	5635	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCTAAGATGGGT	23	True	NA	28	True	AATAAA	-18	NA	49575870	49583827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49576274_49578595
transcript_80878.known	chr17	-	2414	13	FSM	ENSG00000121067.19	ENST00000514121.6	2414	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	88.4057486190174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCACCCCTTTTTCTAA	-2	True	NA	NA	False	NA	NA	NA	49678099	49599546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49675894_49676017_49677932
transcript_80884.known	chr17	-	1860	12	FSM	ENSG00000121067.19	ENST00000509079.6	1860	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	83.0666365979897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAGAAGGGAAAAGGAA	-13	True	NA	-10	True	AAAAAG	-30	NA	49678110	49599989	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49677932
transcript_80886.known	chr17	-	2965	11	FSM	ENSG00000121067.19	ENST00000347630.6	2965	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	69.8730277002507	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCTGTCATTGACT	9489	False	NA	NA	False	AATAAA	-18	NA	49678163	49598885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49677932
transcript_80887.known	chr17	-	2985	11	FSM	ENSG00000121067.19	ENST00000393328.6	2985	11	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_9	76.0168402395153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-13	True	NA	NA	False	AATAAA	-20	NA	49678110	49598883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49675894_49676017_49677932
transcript_80888.known	chr17	-	1707	11	FSM	ENSG00000121067.19	ENST00000513080.6	1707	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	79.3463294677202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGTGGTACTTCGGAGAC	-16	True	NA	-113	True	NA	NA	NA	49678113	49600092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49620620_49620671_49621945_49622068_49622732_49622877_49677932
transcript_80896.known	chr17	-	2850	10	FSM	ENSG00000121067.19	ENST00000504102.6	2850	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	20.3348511880345	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	0	True	NA	NA	False	AATAAA	-20	NA	49678097	49598883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49677932
transcript_809.known	chr1	-	3793	24	FSM	ENSG00000131584.19	ENST00000354700.10	3793	24	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_14	17.1892611659982	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCTCCTGGGCTCCC	105	False	1307947	-39	True	AATAAA	-14	NA	1307930	1292390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1294717_1294817_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566_1298680_1299344_1299357_1299830_1299906_1299972_1300069_1300157_1300203_1300508_1300693_1301987_1302047_1302921_1302976_1303161_1303282_1304085_1304144_1307768
transcript_80902.known	chr17	+	3588	16	FSM	ENSG00000136504.13	ENST00000675278.1	3588	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	155.832160423393	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCTGTTTCATCTG	NA	False	NA	13	True	AATAAA	-12	NA	49788647	49829090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823236_49825505_49825543_49825999_49826147_49826692_49826800_49827400
transcript_80904.known	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	138.118977953813	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	20	False	NA	19	True	AATAAA	-18	NA	49788705	49829096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_80905.known	chr17	+	1774	13	FSM	ENSG00000136504.13	ENST00000454930.6	1774	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	156.383853777243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCCTGGATGGGATCT	-5	True	NA	NA	False	NA	NA	NA	49788680	49827703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49788850_49791885_49792034_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_80908.nic	chr17	+	2659	9	NIC	ENSG00000136504.13	novel	912	8	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	87.1460699056475	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	1961	False	NA	19	True	AATAAA	-18	NA	49814993	49829096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_49815075_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_80911.known	chr17	-	1320	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_7	94.1540459831653	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCAAGCAAAATCACA	7048	False	NA	-33	True	AATAAA	-2	NA	49708090	49701338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
transcript_80913.known	chr17	-	1615	9	FSM	ENSG00000121073.15	ENST00000240333.12	1615	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_7	65.3604190240546	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTTTTCTTAGG	7174	False	49707987	-17	True	ATTAAA	-13	NA	49707964	49700942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
transcript_80916.nic	chr17	-	1077	8	NIC	ENSG00000121073.15	novel	1320	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	156.41676406841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTCTAAAAAATGCACT	3	True	NA	-15	True	AATAAA	-20	NA	49707933	49701320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49707729
transcript_80917.nic	chr17	-	1095	8	NIC	ENSG00000121073.15	novel	1615	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	151.542948717921	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTCTAAAAAATGCACT	-17	True	NA	-15	True	AATAAA	-20	NA	49707953	49701320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706964_49707069_49707729
transcript_80918.known	chr17	-	2329	8	FSM	ENSG00000121104.8	ENST00000240364.7	2329	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_6	9.79379228628721	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAGTTCTGTTAAATA	1	True	NA	-6	True	AATAAA	-20	NA	49764131	49710331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49763891
transcript_80919.known	chr17	-	1522	8	FSM	ENSG00000121104.8	ENST00000513602.5	1522	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	68.0042015508706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCCAGAAGGTCTTG	-1	True	NA	NA	False	NA	NA	NA	49788592	49710994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49788496
transcript_80922.known	chr17	-	529	3	FSM	ENSG00000121073.15	ENST00000508607.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	96	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAGAACCATAGAACTT	16	True	NA	NA	False	AAAAAG	-27	NA	49707920	49706075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49706310_49706964_49707069_49707729
transcript_80924.known	chr17	-	597	4	FSM	ENSG00000176358.16	ENST00000326219.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGAATGGCTCCTTCT	2316	False	NA	-7	True	AATAAA	-7	NA	49848017	49838308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49838674_49841551_49841585_49844063_49844158_49847912
transcript_80928.nic	chr17	+	2048	4	NIC	ENSG00000108813.11	novel	2018	3	NA	NA	-385	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	4.24264068711928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTGTGAGATGTGTT	1	True	NA	12	True	ATTAAA	-20	NA	49968584	49974959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_49969040_49969614_49969752_49973072_49973270_49973700
transcript_80929.known	chr17	+	2018	3	FSM	ENSG00000108813.11	ENST00000240306.5	2018	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTGTGAGATGTGTT	-6	True	NA	12	True	ATTAAA	-20	NA	49969189	49974959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49969752_49973072_49973270_49973700
transcript_80931.known	chr17	+	4889	26	FSM	ENSG00000005884.18	ENST00000320031.13	4889	26	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	9.25686772077899	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGCATCTGCTTCCA	1	True	NA	15	True	AATAAA	-17	NA	50056109	50090481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50056646_50064076_50064205_50064527_50064608_50068055_50068306_50070843_50070931_50071310_50071519_50071985_50072183_50073915_50074005_50074143_50074281_50074447_50074535_50075458_50075527_50075598_50075736_50076325_50076476_50076583_50076682_50076973_50077122_50077378_50077448_50078045_50078126_50078206_50078285_50078823_50078927_50079075_50079259_50079434_50079558_50080261_50080376_50081309_50081409_50087743_50087870_50088224_50088367_50089109
transcript_80938.known	chr17	+	3364	11	FSM	ENSG00000005882.12	ENST00000503176.6	3364	11	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_4	36.9866192020844	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAATGGGCCCTGAG	-23	True	NA	NA	False	NA	NA	NA	50095350	50112152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884_50106070_50106793_50106884_50107075_50107154_50108155_50108233_50108318_50108418_50108611_50108720_50109286_50109401_50109956
transcript_80948.known	chr17	-	4763	10	FSM	ENSG00000167100.15	ENST00000330175.9	4763	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	6.92820323027551	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCTCCTGGATGGTCTG	-11	True	NA	NA	False	NA	NA	NA	50130160	50110039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50113049_50113923_50114080_50114186_50114307_50115563_50115724_50115829_50115905_50116002_50116091_50117406_50117696_50118160_50118328_50124916_50124972_50129516
transcript_80952.nnic	chr17	-	2888	7	NNC	ENSG00000167100.15	novel	2874	9	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	13.4412301024373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTGCTCCAGTTGT	6354	False	NA	2	True	AATAAA	-27	NA	50117757	50111308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_50113049_50113923_50114080_50114186_50114307_50115563_50115724_50115829_50115905_50116002_50116091_50117208
transcript_80956.known	chr17	+	865	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	16.5730705262081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	13	True	NA	NA	False	TATAAA	-22	NA	50095386	50106368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
transcript_80958.known	chr17	-	610	3	FSM	ENSG00000167100.15	ENST00000507043.1	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACCTAGTAATGCTGC	24	True	NA	NA	False	NA	NA	NA	50129796	50118052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50118328_50124916_50124972_50129516
transcript_80959.known	chr17	-	4212	10	FSM	ENSG00000108819.11	ENST00000612501.2	4212	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.77123616632825	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGCCTGGTTTCTT	5	True	NA	-7	True	CATAAA	-14	NA	50150677	50133736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50135385_50135552_50135650_50135967_50136198_50139262_50139317_50139428_50139582_50140092_50140229_50141268_50141374_50143597_50143719_50145112_50145246_50149142
transcript_80963.known	chr17	-	5914	51	FSM	ENSG00000108821.14	ENST00000225964.10	5914	51	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_44	61.4258089079826	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATCCGCAGTGGCCTCC	-1	True	NA	-10	True	AATAAA	-21	NA	50201631	50184100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50185649_50185777_50186021_50186316_50186508_50186639_50186923_50187014_50187123_50187483_50187538_50187875_50187984_50188095_50188150_50188529_50188638_50188741_50188796_50188902_50189011_50189167_50189276_50189376_50189539_50189678_50189733_50189858_50189913_50190000_50190109_50190326_50190381_50190542_50190597_50190816_50190925_50191382_50191491_50191787_50191887_50191979_50192025_50192474_50192529_50192639_50192694_50192796_50192851_50192993_50193048_50193942_50194042_50194129_50194184_50194348_50194448_50194572_50194627_50194720_50194829_50195046_50195101_50195231_50195331_50195433_50195479_50195566_50195666_50195922_50195977_50196154_50196200_50196313_50196368_50196483_50196529_50196616_50196671_50197009_50197064_50197179_50197234_50197731_50197786_50197948_50198003_50198160_50198206_50198432_50198505_50199225_50199328_50199417_50199454_50199555_50199591_50199752_50199948_50201410
transcript_81.known	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_4	247.395432455816	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
transcript_81000.nnic	chr17	+	1007	5	NNC	ENSG00000167105.8	novel	2693	5	NA	NA	-52	673	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	102.27780795461	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTACTGATTGCGGC	5345	False	NA	33	True	GATAAA	-14	NA	50274413	50279789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278955_50279194
transcript_81001.known	chr17	+	2693	5	FSM	ENSG00000167105.8	ENST00000507382.2	2693	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	19.6468827043885	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAAAGCATCCATCAC	-13	True	NA	19	True	AATAAA	-19	NA	50274465	50281485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_81018.known	chr17	+	3507	11	FSM	ENSG00000015532.10	ENST00000017003.7	3507	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	15.7254570680791	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCATCACCATTCATTG	4	True	NA	42	True	NA	NA	NA	50346125	50361185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50358206_50358541_50359968
transcript_81022.nnic	chr17	+	3581	11	NNC	ENSG00000015532.10	novel	587	4	NA	NA	541	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.7954543497828	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGTGTTTTTC	555	False	NA	8	True	AATATA	-15	NA	50346676	50361151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_50346935_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50358206_50358541_50359968
transcript_81029.known	chr17	+	2107	10	FSM	ENSG00000015532.10	ENST00000507602.5	2107	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	56.3126194658987	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGCCGCATCCCTGTCCT	13	True	NA	NA	False	ATTAAA	-30	NA	50346134	50363138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50362978
transcript_81032.known	chr17	+	3267	10	FSM	ENSG00000015532.10	ENST00000376550.7	3267	10	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_8	47.9578003799585	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGTGTTTTTC	14	True	NA	8	True	AATATA	-15	NA	50346135	50361151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50358206_50358541_50359968
transcript_81053.known	chr17	+	2174	1	FSM	ENSG00000015532.10	ENST00000571021.1	2174	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGTGTTTTTC	536	False	NA	8	True	AATATA	-15	NA	50358977	50361151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50359000_50361200
transcript_81056.known	chr17	-	686	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_3	124.115537571517	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	3	True	NA	-14	True	AATAAA	-38	NA	50373184	50367866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
transcript_81058.known	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_2	20	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	9832	False	NA	-15	True	AATAAA	-37	NA	50373207	50367867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50370100_50370454_50370587_50373130
transcript_81060.known	chr17	+	2330	9	FSM	ENSG00000154920.15	ENST00000338165.9	2330	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.38152730712011	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTAGTGATTCTGA	-7	True	NA	38	True	AATAAA	-42	NA	50373228	50381483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50373278_50375184_50375984_50376065_50376194_50378594_50378682_50378773_50378896_50379106_50379225_50379451_50379568_50380311_50380502_50380762
transcript_81070.known	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_1	36.9082947617771	938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-13	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
transcript_81084.known	chr17	+	2177	16	FSM	ENSG00000167107.13	ENST00000300441.9	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	12.9020239583649	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	-6	True	NA	15	True	CATAAA	-21	NA	50426217	50474837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_81097.nnic	chr17	+	2282	10	NNC	ENSG00000136444.10	novel	2467	9	NA	NA	-101	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_9	39.6092020733679	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGACTGTGGTCCTCT	NA	False	NA	12	True	AATAAA	-14	NA	50478758	50485972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_50479020_50479628_50479763_50479879_50480085_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743_50484895_50485178
transcript_81100.known	chr17	+	2467	9	FSM	ENSG00000136444.10	ENST00000258955.7	2467	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	19.8997487421324	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTGTGGTCCTCTCC	2	True	NA	14	True	AATAAA	-16	NA	50478859	50485974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50479020_50479628_50479763_50479879_50480085_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743
transcript_81107.known	chr17	+	1064	8	FSM	ENSG00000136444.10	ENST00000504284.1	1064	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.6311744494118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCAGCAGAGAACCCC	45	False	NA	NA	False	NA	NA	NA	50478902	50484819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50479020_50479628_50479763_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743
transcript_81120.known	chr17	+	3135	19	FSM	ENSG00000136449.15	ENST00000323776.11	3135	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.8781852993308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTGCCTCTGTGTC	-21	True	NA	5	True	AATAAA	-33	NA	50508438	50531501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50508751_50516569_50516698_50517292_50517453_50517594_50517699_50518540_50518725_50518973_50519090_50519639_50519788_50521109_50521226_50521315_50521432_50521972_50522082_50522938_50523129_50523596_50523785_50524876_50525024_50525880_50526268_50527286_50527409_50528154_50528271_50528694_50528841_50529017_50529189_50531326
transcript_81128.known	chr17	+	2634	17	FSM	ENSG00000006282.21	ENST00000006658.11	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	19.2295955170669	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	-6	True	NA	11	True	AATAAA	-22	NA	50547173	50555852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50547286_50547719_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_81129.nic	chr17	+	2821	17	NIC	ENSG00000006282.21	novel	2634	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	30.4132346808096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	-6	True	NA	11	True	AATAAA	-22	NA	50547173	50555852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50547286_50547719_50547955_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_81130.known	chr17	+	2734	17	FSM	ENSG00000006282.21	ENST00000503127.5	2734	17	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	15.8979902424803	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGGGCCTCAGCTTT	8341	False	NA	9	True	AATAAA	-20	NA	50547126	50555850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50547286_50547664_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_81134.nic	chr17	+	2913	16	NIC	ENSG00000006282.21	novel	2634	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	31.3323404097995	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	-6	True	NA	11	True	AATAAA	-22	NA	50547173	50555852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50547286_50547719_50547955_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_81136.known	chr17	+	3539	18	FSM	ENSG00000006282.21	ENST00000504334.5	3539	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.3545560950523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGGGCCTCAGCTTT	4272	False	NA	9	True	AATAAA	-20	NA	50543057	50555850	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50543536_50546305_50546482_50547067_50547286_50547664_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_81138.known	chr17	+	2634	16	FSM	ENSG00000006282.21	ENST00000356488.8	2634	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	25.7704395685358	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	8340	False	NA	11	True	AATAAA	-22	NA	50547125	50555852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50547286_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_81168.known	chr17	+	2092	10	FSM	ENSG00000136449.15	ENST00000470609.5	2092	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.9606472432165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGGTGACAAGAGCGAAAC	6	True	NA	NA	False	NA	NA	NA	50508424	50522666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50508751_50516569_50516698_50517292_50517453_50517594_50517699_50518540_50518725_50518973_50519090_50519639_50519788_50521109_50521226_50521315_50521432_50521972
transcript_81169.known	chr17	+	2449	10	FSM	ENSG00000049283.19	ENST00000512379.5	2449	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.3137084989848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACAGCTCTTCTCAACC	8	True	NA	NA	False	NA	NA	NA	50532737	50542486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50532986_50536420_50536626_50536707_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_81170.known	chr17	+	3879	10	FSM	ENSG00000049283.19	ENST00000268933.8	3879	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.7688142885864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGTGCCTGCGTTTC	5	True	NA	NA	False	AGTAAA	-17	NA	50532734	50543750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50532986_50536420_50537119_50538078_50538198_50538883_50538965_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_81173.nic	chr17	+	2619	9	NIC	ENSG00000049283.19	novel	3879	10	NA	NA	-295	0	intron_retention	FALSE	canonical	1	1	junction_1	10.8505472212235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTCTCACCAAGTGGA	NA	False	NA	6	True	AATAAA	-17	NA	50532386	50542364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50532845_50536420_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_81176.nic	chr17	+	2641	9	NIC	ENSG00000049283.19	novel	3879	10	NA	NA	-176	0	intron_retention	FALSE	canonical	3	12	junction_1	7.64444242571033	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTCTCACCAAGTGGA	NA	False	NA	6	True	AATAAA	-17	NA	50532505	50542364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50532986_50536420_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_81188.nic	chr17	+	2497	7	ISM	ENSG00000006283.18	ENST00000416767.8	4899	23	-768	32798	-51	0	5prime_fragment	FALSE	canonical	0	0	junction_1	3.1446603773522	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATCAGTGATCAATTG	NA	False	NA	5	True	AATAAA	-19	NA	50560663	50573674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50561702_50568869_50568982_50569164_50569299_50569705_50569804_50571877_50572038_50572553_50572855_50573020
transcript_8119.known	chr1	+	2168	8	FSM	ENSG00000142949.17	ENST00000436724.5	2168	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	386.311125537805	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTCTCCACCCAG	23	True	NA	NA	False	NA	NA	NA	43530902	43580078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43575909_43575928_43578809
transcript_81194.known	chr17	-	4166	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	43.4647845962683	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCTATATGCCTTCATT	-22	True	NA	-17	True	ATTAAA	-18	NA	50707914	50693197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
transcript_81198.known	chr17	+	2284	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_10	157.826772126911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCTTGTTACACTCAAT	-14	True	NA	7	True	AATAAA	-13	NA	50719598	50751617	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
transcript_81199.known	chr17	+	1972	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_10	79.0364472885769	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	-10	True	NA	23	True	AATAAA	-14	NA	50719602	50752709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
transcript_8120.known	chr1	+	1129	8	FSM	ENSG00000142949.17	ENST00000617451.4	1129	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	297.886363760219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGCATACCTGGCCTG	-4	True	NA	NA	False	NA	NA	NA	43530875	43579285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43579175
transcript_81205.known	chr17	+	6987	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_7	59.5572139072595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGTGTAGGTAGTTAC	-10	True	NA	32	True	AATAAA	-26	NA	50719602	50756219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
transcript_81208.known	chr17	+	1112	9	FSM	ENSG00000108848.16	ENST00000508045.5	1112	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	309.470288355764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTGTTTGTTT	NA	False	NA	22	True	ATTAAA	-22	NA	50719569	50744813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50738136_50738200_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_81209.nic	chr17	+	1107	9	NIC	ENSG00000108848.16	novel	1112	9	NA	NA	0	959	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	257.956391663397	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAGCAAGAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	50719564	50745772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_8121.nic	chr1	+	2057	8	ISM	ENSG00000142949.17	ENST00000438120.5	6377	33	-66	32641	-52	-1402	5prime_fragment	FALSE	canonical	3	605	junction_7	99.8139084823884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCATGGTGGCACACAC	4767	False	NA	NA	False	NA	NA	NA	43530823	43589716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730
transcript_81214.nic	chr17	+	914	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-34	5845	0	959	5prime_fragment	FALSE	canonical	3	579	junction_7	42.7579805177839	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAGCAAGAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	50719564	50745772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_81215.nic	chr17	+	988	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-34	5771	0	1033	5prime_fragment	FALSE	canonical	3	579	junction_7	42.7579805177839	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAGAGGAAGAAAGAGAA	NA	False	NA	NA	False	AAAAAG	-43	NA	50719564	50745846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_81216.nic	chr17	+	856	7	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-34	6809	0	0	5prime_fragment	FALSE	canonical	3	600	junction_2	34.9094065642295	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTAAGTTTTTTTGTT	NA	False	NA	17	True	ATTAAA	-17	NA	50719564	50744808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_81221.known	chr17	+	533	4	FSM	ENSG00000108848.16	ENST00000508218.5	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	35.9660333586504	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAGAGACCTCCCTAA	-16	True	NA	NA	False	NA	NA	NA	50719596	50741292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101
transcript_81222.known	chr17	+	3417	2	FSM	ENSG00000173714.8	ENST00000311378.5	3417	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTGATTCGTTTG	-5	True	NA	NA	False	ATTAAA	-21	NA	50835585	50842353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50836148_50839498
transcript_81223.known	chr17	+	1351	2	FSM	ENSG00000229980.5	ENST00000416263.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTATTTGTTTGTTTT	350	False	NA	21	True	TATAAA	-18	NA	50866678	50868307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50867218_50867495
transcript_81226.known	chr17	-	2238	2	FSM	ENSG00000141232.5	ENST00000499247.3	2238	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATTGTCTTTGTTTTT	0	True	NA	-16	True	ATTAAA	-19	NA	50866354	50862222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50864164_50866057
transcript_81227.known	chr17	-	8276	30	FSM	ENSG00000008294.22	ENST00000262013.12	8276	30	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_24	38.8344454038118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTAGTGTGTTTTGT	-3	True	NA	-8	True	TATAAA	-19	NA	51120868	50962173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51031680_51031723_51041500_51041652_51047374_51047470_51056411_51056483_51079583_51079705_51120353
transcript_81229.known	chr17	-	4761	29	FSM	ENSG00000008294.22	ENST00000357122.8	4761	29	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_24	28.1858808191446	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCCTGTTTCTGACTT	0	True	NA	-38	True	ATTAAA	-28	NA	51120865	50965643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51041500_51041652_51047374_51047470_51056411_51056483_51079583_51079705_51120353
transcript_81233.nic	chr17	-	663	2	ISM	ENSG00000008294.22	ENST00000357122.8	4761	29	-30	113940	-27	-48141	5prime_fragment	FALSE	canonical	3	115	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACATTTCTTCT	7228	False	NA	NA	False	NA	NA	NA	51120895	51079583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_51079705_51120353
transcript_81234.nic	chr17	-	583	2	ISM	ENSG00000008294.22	ENST00000357122.8	4761	29	-30	114020	-27	-48221	5prime_fragment	FALSE	canonical	3	115	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTACAGACCCGAGTGG	7228	False	NA	NA	False	NA	NA	NA	51120895	51079663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_51079705_51120353
transcript_81235.known	chr17	+	1021	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	2348.45255173595	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-5	True	NA	26	True	AATAAA	-17	NA	51153589	51171744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_81236.known	chr17	+	894	7	FSM	ENSG00000011052.21	ENST00000376392.10	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	2109.4924876746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	9	True	NA	26	True	AATAAA	-17	NA	51153603	51171744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51171486
transcript_81239.known	chr17	+	986	6	FSM	ENSG00000239672.8	ENST00000336097.7	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	1510.05634331968	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCATTGCTTTTTT	-19	True	NA	53	True	ATTAAA	-43	NA	51153575	51162061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_81240.known	chr17	+	796	6	FSM	ENSG00000239672.8	ENST00000013034.3	796	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1548.037648121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGACCAGGCTGTAGGA	70	False	NA	NA	False	NA	NA	NA	51153664	51161898	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153725_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_81242.known	chr17	+	781	5	FSM	ENSG00000239672.8	ENST00000475573.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1290.15018505599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTCATTGAGTTGGTT	2	True	NA	27	True	ATTAAA	-17	NA	51153596	51162035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097_51161273_51161727
transcript_81243.known	chr17	+	890	5	FSM	ENSG00000239672.8	ENST00000393196.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	2690	junction_1	327.113512408155	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCATTCTTTGCCTGC	-36	True	NA	160	True	TATAAA	-29	NA	51153558	51162168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_81245.known	chr17	+	850	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	2863.09788515866	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	4226	False	NA	26	True	AATAAA	-17	NA	51165434	51171744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_81247.known	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	4509	junction_1	993.013941241511	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-2	True	NA	26	True	AATAAA	-17	NA	51166410	51171744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_81248.known	chr17	+	749	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_1	2727.74421454798	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	5	True	NA	26	True	AATAAA	-17	NA	51166417	51171744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_81253.known	chr17	+	568	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	2544.70971931094	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	7	True	NA	26	True	AATAAA	-17	NA	51166419	51171744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
transcript_81259.known	chr17	+	692	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2863.95500139231	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	271	False	NA	25	True	AATAAA	-16	NA	51165814	51171743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_81260.known	chr17	+	866	4	FSM	ENSG00000243678.12	ENST00000393190.4	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	6260	junction_3	473.063068381655	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	76	False	NA	26	True	AATAAA	-17	NA	51166563	51171744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166957_51168241_51168344_51169936_51170050_51171486
transcript_81265.nic	chr17	-	2116	16	ISM	ENSG00000011258.16	ENST00000586178.6	5365	17	-56	14813	-56	15	5prime_fragment	FALSE	canonical	3	26	junction_12	12.0037031323208	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	1005	False	NA	NA	False	AAGAAA	-3	NA	51260105	51192237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51259142_51259207_51259834
transcript_81267.nnic	chr17	-	2031	15	NIC	ENSG00000011258.16	novel	5365	17	NA	NA	-35	15	combination_of_known_splicesites	FALSE	canonical	3	11	junction_14	13.8173212797177	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	-17	True	NA	NA	False	AAGAAA	-3	NA	51260084	51192237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51259834
transcript_81268.nic	chr17	-	2771	15	NIC	ENSG00000011258.16	novel	5365	17	NA	NA	-946	15	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	15.0626243749628	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	1	True	NA	NA	False	AAGAAA	-3	NA	51261109	51192237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51260119
transcript_81281.known	chr17	+	1876	14	FSM	ENSG00000011260.14	ENST00000225298.12	1876	14	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_2	65.1874856396814	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTATCTGGTTCTTCC	-8	True	NA	NA	False	AATAAA	-25	NA	51260545	51297933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51260927_51263273_51263387_51266181_51266281_51268836_51268905_51273361_51273451_51275865_51275992_51277129_51277305_51280004_51280106_51280388_51280480_51285244_51285369_51288028_51288204_51293902_51294046_51296964_51297004_51297781
transcript_81302.known	chr17	+	1895	15	FSM	ENSG00000141198.16	ENST00000348161.8	1895	15	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	130.160203485661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAATTATAAATTGTTA	3	True	NA	-24	True	ACTAAA	-44	NA	54900805	54961722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_81303.known	chr17	+	1522	14	FSM	ENSG00000141198.16	ENST00000536554.5	1522	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	132.203313030844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTACTTAGTCCT	9	True	NA	NA	False	NA	NA	NA	54900852	54961475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_8131.known	chr1	+	1962	6	FSM	ENSG00000142949.17	ENST00000372405.1	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_3	70.2908244367642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTCTCCACCCAG	6690	False	NA	NA	False	NA	NA	NA	43538197	43580078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809
transcript_81315.known	chr17	-	1054	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	220.06930726478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAACCTGTGTCCTTGT	-2	True	NA	-11	True	AATAAA	-11	NA	54968654	54951908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
transcript_81320.nic	chr17	-	768	4	ISM	ENSG00000166260.13	ENST00000572558.5	1054	5	-5	9297	-5	-784	5prime_fragment	FALSE	canonical	3	20	junction_1	204.630289926872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCCTGTCCTTCTCTTT	-7	True	NA	-34	True	AATAAA	-20	NA	54968659	54961205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_54961313_54963305_54963432_54964696_54964853_54968280
transcript_81321.known	chr17	-	3150	4	FSM	ENSG00000166260.13	ENST00000299335.8	3150	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	18.8325958557674	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTCTAGTTTATTT	-2	True	NA	NA	False	AGTAAA	-20	NA	54968654	54960421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_54962916_54963305_54963432_54964696_54964853_54968280
transcript_81322.known	chr17	-	1108	3	FSM	ENSG00000166260.13	ENST00000571584.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAGGCTTAATCCC	-1	True	NA	11	True	ATTAAA	-33	NA	54968703	54962902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_54963432_54964696_54964853_54968280
transcript_81325.known	chr17	+	2168	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_15	88.9094420682578	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	8	True	NA	8	True	AATAAA	-16	NA	54900851	54961956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_81326.known	chr17	+	1849	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	38.7011340632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	13	True	NA	14	True	AGTAAA	-20	NA	54900856	54938033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
transcript_81327.known	chr17	+	15590	18	FSM	ENSG00000166263.13	ENST00000376352.6	15590	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	14.9978083750715	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATTGGTTTTTGTGTGAA	-1	True	NA	9	True	AATAAA	-18	NA	54968764	55173632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55047088_55047155_55072899_55073077_55078077_55078195_55078685_55078736_55081049_55081184_55141309_55141368_55159796
transcript_81334.known	chr17	-	2641	8	FSM	ENSG00000108960.9	ENST00000649377.1	2641	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.124571403312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAAAGTTGTTACTTGG	-3	True	NA	-41	True	NA	NA	NA	55421835	55392642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55404454_55404548_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_81336.known	chr17	-	2569	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_6	24.0346971411471	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-3	True	NA	-20	True	AATAAA	-14	NA	55421835	55392621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_81338.known	chr17	-	570	2	FSM	ENSG00000108960.9	ENST00000577038.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACCCTGTTCAATT	-3	True	NA	NA	False	AAAAAG	-9	NA	55421797	55420091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_55420534_55421669
transcript_8134.known	chr1	+	2388	13	FSM	ENSG00000126091.21	ENST00000351035.8	2388	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.0416048465504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATAAAGCTCTTCCCTGA	12	True	NA	-12	True	NA	NA	NA	43707543	43931139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43824730_43824893_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_81342.known	chr17	+	2680	6	FSM	ENSG00000141179.14	ENST00000576183.5	2680	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	66.5540381945378	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTTGTCCTGTGTAC	16	True	NA	18	True	AATAAA	-11	NA	55751060	55777368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55775310
transcript_81346.known	chr17	+	1972	6	FSM	ENSG00000141179.14	ENST00000268896.10	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	24.5226425982193	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	6	True	NA	24	True	AATAAA	-17	NA	55751050	55777374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_81347.known	chr17	+	919	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	69.3195499119837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGAGCTCGCATTCTA	1	True	NA	NA	False	AATAAA	-20	NA	55751093	55823090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
transcript_81348.known	chr17	+	1856	6	FSM	ENSG00000141179.14	ENST00000325214.10	1856	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	64.8919101275344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	13	False	NA	24	True	AATAAA	-17	NA	55751399	55777374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751478_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_81350.known	chr17	-	2915	10	FSM	ENSG00000121060.19	ENST00000537230.3	2915	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.0823767529117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCCTCCAGCTAAGCTG	4976	False	NA	NA	False	NA	NA	NA	56914032	56890667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_56891301_56891354_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
transcript_81352.known	chr17	-	5745	9	FSM	ENSG00000121060.19	ENST00000316881.9	5745	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	8.61684396980704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGTTCTGTGATTTT	14	True	NA	-6	True	AATAAA	-17	NA	56914049	56887908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
transcript_81356.known	chr17	+	1843	2	FSM	ENSG00000153933.10	ENST00000572810.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTTCTATTTCC	-37	True	NA	NA	False	AATAAA	-13	NA	56834106	56836466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_56834261_56834777
transcript_81357.known	chr17	-	2634	7	FSM	ENSG00000121058.5	ENST00000240316.5	2634	7	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	28.3705637746043	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTACCGAGTTATCAT	-13	True	NA	-15	True	AATAAA	-17	NA	56961050	56938198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56949768_56949888_56950997_56960774
transcript_8136.known	chr1	+	2422	13	FSM	ENSG00000126091.21	ENST00000643252.1	2422	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	14.3691413181937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGAAGCAATAAAGCTC	4	True	NA	-20	True	NA	NA	NA	43707535	43931131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43921442_43921639_43930131
transcript_81361.nic	chr17	-	630	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-36	12480	-36	234	5prime_fragment	FALSE	canonical	3	335	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAATGTGAATATAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	56961086	56950678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_56950997_56960774
transcript_81362.nic	chr17	-	568	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-36	12542	-36	172	5prime_fragment	FALSE	canonical	3	335	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTGTGGCACAGTGGG	NA	False	NA	NA	False	AATAAA	-1	NA	56961086	56950740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_56950997_56960774
transcript_81365.known	chr17	+	1915	13	FSM	ENSG00000121064.13	ENST00000576154.5	1915	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	111.800510583211	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	11	True	NA	23	True	AATAAA	-23	NA	56978147	57006768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998373_56998499_57000854_57000993_57002017_57002182_57006172
transcript_81366.nic	chr17	+	1856	12	NIC	ENSG00000121064.13	novel	1921	13	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	109.383471336637	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	NA	False	NA	23	True	AATAAA	-23	NA	56978081	57006768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_57000854_57000993_57002017_57002182_57006172
transcript_8137.known	chr1	+	2354	13	FSM	ENSG00000126091.21	ENST00000647148.1	2354	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	14.3691413181937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGAGCCTGGCCTCTT	23	True	NA	0	True	AATAAA	-5	NA	43707554	43931151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43921511_43921639_43930131
transcript_81374.known	chr17	-	713	3	FSM	ENSG00000263004.3	ENST00000576871.2	740	3	19	8	2	-2	multi-exon	FALSE	canonical	3	12	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGTTTGCAGTATT	14	False	NA	-7	True	AATAAA	-16	NA	57085022	57078297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57078704_57079286_57079411_57084839
transcript_81398.known	chr17	+	3909	11	FSM	ENSG00000121057.13	ENST00000337714.8	3909	11	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_2	49.8260975794814	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCTTTGAGTCCATTT	-3	True	NA	23	True	CATAAA	-17	NA	57085245	57121344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57085399_57105440_57107179_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
transcript_8140.known	chr1	+	2278	12	FSM	ENSG00000126091.21	ENST00000642949.1	2278	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	11.2360105858039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCTTTTTGCCTTC	13	True	NA	9	True	AATAAA	-14	NA	43707544	43931160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899508_43899728_43920403_43920551_43920781_43920929_43930131
transcript_8141.known	chr1	+	2254	12	FSM	ENSG00000126091.21	ENST00000347631.8	2254	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	6.75302197428114	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTTTTTGCCTT	4	True	NA	8	True	AATAAA	-13	NA	43707535	43931159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_81417.known	chr17	+	2247	15	FSM	ENSG00000153944.12	ENST00000675656.1	2247	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.77688921302736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTTTGGCTTGGGTG	43	False	NA	NA	False	TTTAAA	-11	NA	57256781	57680738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57650649_57650674_57652098_57652162_57674917_57675127_57676986_57677060_57679548
transcript_8142.known	chr1	+	2297	12	FSM	ENSG00000126091.21	ENST00000361392.9	2297	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	11.7712354267118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTTTTTGCCTT	6	True	NA	8	True	AATAAA	-13	NA	43707537	43931159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736426_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_81421.known	chr17	+	6379	14	FSM	ENSG00000153944.12	ENST00000284073.7	6379	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	3.59157462459346	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGTGTTCTTTCAC	-24	True	NA	20	True	AATAAA	-25	NA	57256522	57684689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57652098_57652162_57674971_57675127_57676986_57677060_57679548
transcript_81427.known	chr17	+	534	6	FSM	ENSG00000153944.12	ENST00000581523.5	534	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.67802782663136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTATGGGTGTGTGA	4	True	NA	16	True	AATAAA	-28	NA	57256742	57274489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57274267
transcript_81428.known	chr17	+	2098	1	FSM	ENSG00000279555.1	ENST00000623762.1	2098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACAGTGTC	4432	False	NA	NA	False	CATAAA	-41	NA	57277919	57280017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57277900_57280000
transcript_81430.known	chr17	-	5609	5	FSM	ENSG00000181610.13	ENST00000313608.13	5609	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_4	16.4981059518964	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCAGATTTCTTTTT	1	True	NA	-5	True	AATAAA	-22	NA	57850044	57834780	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
transcript_81435.known	chr17	-	3710	11	FSM	ENSG00000180891.13	ENST00000577830.6	3710	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	7.78716893357271	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGGTTGCAGGGAAG	-2	True	NA	NA	False	AATAAA	-21	NA	57955412	57861242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57863286_57866473_57866545_57867356_57867416_57868149_57868244_57869121_57869194_57871285_57871370_57872662_57872856_57873590_57873718_57879610_57879739_57885228_57885880_57955224
transcript_81445.known	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	18.2756668824971	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-32	True	NA	-6	True	ATTAAA	-17	NA	57988254	57971551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
transcript_8145.known	chr1	+	2212	11	FSM	ENSG00000126091.21	ENST00000361400.9	2212	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	11.1175536877498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTTTTTGCCTTCTC	1	True	NA	11	True	AATAAA	-16	NA	43707532	43931162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_81459.nic	chr17	-	2243	5	NIC	ENSG00000136450.13	novel	1317	5	NA	NA	-298	-3	intron_retention	FALSE	canonical	3	323	junction_1	740.149435924935	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCATGGTTGTCCTTTT	-20	True	NA	-5	True	AATAAA	-15	NA	58007644	58003495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_58004002_58004922_58005601_58005800_58005974_58006342_58006528_58006943
transcript_81460.known	chr17	-	1317	5	FSM	ENSG00000136450.13	ENST00000584773.5	1317	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	865.726104203864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAACAAGATAGAGTAT	-11	True	NA	NA	False	NA	NA	NA	58007261	58004587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58005042_58005413_58005601_58005800_58005974_58006342_58006528_58006943
transcript_81463.known	chr17	-	5343	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	0	0	0	multi-exon	FALSE	canonical	3	1661	junction_1	257.827246211274	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCCTTCATTTTGCAC	4	True	NA	-17	True	ATTAAA	-19	NA	58007246	58000918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
transcript_81465.known	chr17	-	1720	4	FSM	ENSG00000136450.13	ENST00000581979.5	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	851.160123334943	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCAAAGATTTTTTTTT	18	True	NA	NA	False	NA	NA	NA	58007232	58003806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58004002_58004922_58005974_58006342_58006528_58006943
transcript_81467.known	chr17	-	3117	3	FSM	ENSG00000136450.13	ENST00000582730.6	3117	3	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_2	189.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGGTATTAGCCATCT	-11	True	NA	-35	True	ATTAAA	-17	NA	58007261	58003359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58005974_58006342_58006528_58006943
transcript_81469.known	chr17	-	689	2	FSM	ENSG00000136450.13	ENST00000578430.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAATTGCTTTAGTTTT	278	False	NA	NA	False	NA	NA	NA	58007346	58006241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58006528_58006943
transcript_81470.known	chr17	-	2483	1	FSM	ENSG00000264112.1	ENST00000582096.1	2483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACTTGTTTTTATTTT	4960	False	NA	-3	True	ACTAAA	-25	NA	57991521	57989038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57989000_57991500
transcript_81471.known	chr17	+	1514	1	FSM	ENSG00000279069.1	ENST00000624641.1	1514	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTGAAAATACCGGTCC	3	True	NA	NA	False	NA	NA	NA	58006673	58008187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58006700_58008200
transcript_81472.known	chr17	+	6807	3	FSM	ENSG00000264364.3	ENST00000579991.3	6807	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCAGATAGTTTAGT	2	True	NA	NA	False	ATTAAA	-21	NA	58083418	58095542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58083684_58087081_58087223_58089141
transcript_81478.known	chr17	-	2343	18	FSM	ENSG00000011143.19	ENST00000393119.7	2343	18	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_4	20.1858150201492	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81480.known	chr17	-	2403	18	FSM	ENSG00000011143.19	ENST00000675753.2	2403	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	35.6368651703478	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214899_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81484.known	chr17	-	1926	17	FSM	ENSG00000011143.19	ENST00000393120.6	1926	17	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	37.9674511094701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGATCTGCTGTTCTCCA	5	True	NA	NA	False	NA	NA	NA	58219236	58205740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81490.known	chr17	-	3018	17	FSM	ENSG00000011143.19	ENST00000677709.1	3018	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	17.9160368106342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81496.known	chr17	-	2260	17	FSM	ENSG00000011143.19	ENST00000678463.1	2260	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	38.2522466660456	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81508.known	chr17	-	2126	16	FSM	ENSG00000011143.19	ENST00000313863.11	2126	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	37.9101862593976	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81515.known	chr17	-	1960	15	FSM	ENSG00000011143.19	ENST00000677486.1	1960	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	40.2464347514669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58216665_58216737_58218619_58218730_58219150
transcript_81522.known	chr17	-	3639	15	FSM	ENSG00000011143.19	ENST00000677416.1	3639	15	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_11	16.3988862240018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81523.known	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.1251231799241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-14	True	NA	-9	True	AATAAA	-21	NA	58219255	58207560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81529.known	chr17	-	1626	14	FSM	ENSG00000011143.19	ENST00000585134.2	1626	14	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_10	15.1294219415027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCCAGGCATTGTGC	-14	True	NA	-14	True	AATAAA	-16	NA	58219255	58207565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81533.known	chr17	-	1289	12	FSM	ENSG00000011143.19	ENST00000581761.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	43.3280776639074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTTTTTCTGAATG	-14	True	NA	NA	False	AATAAA	-29	NA	58219255	58208653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58208894_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81536.known	chr17	-	2810	8	FSM	ENSG00000011143.19	ENST00000677076.1	2810	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.7365890071378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATCCCTACAAAAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	58219255	58211756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81537.known	chr17	-	1040	4	FSM	ENSG00000011143.19	ENST00000581180.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTGCTTTCATTATTAG	11	True	NA	NA	False	AATAAA	-15	NA	58219230	58215464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58216244_58216665_58216737_58218619_58218730_58219150
transcript_81549.known	chr17	-	5575	9	FSM	ENSG00000108375.13	ENST00000584437.5	5575	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.24037034920393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTCTTGTGGTT	-2	True	NA	-4	True	AATATA	-29	NA	58417533	58353675	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58354987_58357467_58358824_58360148_58360252_58360782_58360945_58362543_58362649_58363274_58363407_58363525_58363601_58370910_58371034_58415325
transcript_81553.known	chr17	-	2610	8	FSM	ENSG00000108375.13	ENST00000581868.1	2610	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3.65892813567591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGAAGTTGCAGTGAGCC	3879	False	NA	NA	False	NA	NA	NA	58417085	58356982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58358824_58360148_58360252_58360782_58360945_58362543_58362649_58363274_58363407_58363525_58363601_58370910_58371034_58417016
transcript_81558.known	chr17	-	1643	5	FSM	ENSG00000213246.7	ENST00000577396.5	1643	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	186.571702034365	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGATTGTAGAAACGAAG	655	False	NA	-73	True	AAAAAG	-37	NA	58352423	58345246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58346314_58347187_58347242_58347528_58347585_58351401_58351509_58352064
transcript_81561.known	chr17	-	1401	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	230.912681909562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCATTTTTCAATAC	14	True	NA	-1	True	TATAAA	-24	NA	58352167	58345174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
transcript_81563.known	chr17	-	539	3	FSM	ENSG00000213246.7	ENST00000581204.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGCCTTGCCTCCCTC	5467	False	NA	-8	True	AATAAA	-32	NA	58347611	58345911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58346314_58347187_58347242_58347528
transcript_81566.known	chr17	-	5839	19	FSM	ENSG00000108389.10	ENST00000323456.9	5839	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_18	27.1559283480503	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCGTTT	9998	False	NA	-7	True	AATAAA	-15	NA	58517905	58489536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
transcript_81567.known	chr17	-	5987	18	FSM	ENSG00000108389.10	ENST00000682306.1	5987	18	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_17	15.2040333384857	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCGTTT	18	True	NA	-7	True	AATAAA	-15	NA	58514638	58489536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58514362
transcript_81579.nic	chr17	-	1743	13	NIC	ENSG00000108387.16	novel	1784	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	27.8731003338743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCCCTGTGTGTA	-46	True	NA	-6	True	AATAAA	-23	NA	58532084	58520255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58526681_58526979_58531479_58531552_58531960
transcript_81583.known	chr17	-	1530	12	FSM	ENSG00000108387.16	ENST00000317256.10	1530	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	21.7540724789978	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCTGCTCAGGCCCCT	-8	True	NA	-109	True	TTTAAA	-42	NA	58532046	58520358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58526681_58526979_58531960
transcript_81586.nic	chr17	-	1744	11	NIC	ENSG00000108387.16	novel	1784	12	NA	NA	-168	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_10	15.8395075681032	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCCCTGTGTGTA	8363	False	NA	-6	True	AATAAA	-23	NA	58532454	58520255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58531960
transcript_8159.known	chr1	+	4486	22	FSM	ENSG00000066135.13	ENST00000372396.4	4486	22	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	42.0984161696248	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	-12	True	NA	17	True	AATAAA	-18	NA	43650148	43705518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43650253_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_81590.known	chr17	-	952	5	FSM	ENSG00000108387.16	ENST00000580809.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	20.8371663140649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGGGGCCACTCTAGG	-16	True	NA	NA	False	NA	NA	NA	58532054	58521548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58531960
transcript_81594.known	chr17	+	2562	9	FSM	ENSG00000108384.15	ENST00000337432.9	2562	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	7.36439916082772	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTTTCAAAATCACCTA	0	True	NA	NA	False	AATAAA	-19	NA	58692601	58735611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_81595.known	chr17	+	1098	8	FSM	ENSG00000108384.15	ENST00000482007.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	25.7317401078822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCAGATCATATGAAG	13	True	NA	6	True	AATAAA	-17	NA	58692614	58734327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58692789_58694930_58695190_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_81598.known	chr17	+	567	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTACTTCATTATCC	26	True	NA	7	True	ATTAAA	-18	NA	58692627	58695336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58692789_58694930
transcript_81599.known	chr17	+	6560	7	FSM	ENSG00000175175.6	ENST00000308249.4	6560	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	4.01732359773132	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCATTTGTCTTTTTAT	-2	True	NA	20	True	AATAAA	-21	NA	58755853	58985179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58756462_58955648_58955768_58965693_58965894_58969538_58969728_58972131_58972276_58972831_58972926_58979973
transcript_81605.known	chr17	-	3622	25	FSM	ENSG00000108395.14	ENST00000393066.7	3622	25	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	64.1995045844506	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATTGCTAAAGTGAAGC	NA	False	NA	-17	True	AATAAA	-20	NA	59106921	58982650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58982922_58999380_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_81617.known	chr17	-	4489	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_22	33.8930264224901	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	24	False	59106904	-5	True	AATAAA	-16	NA	59106880	58998201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_81622.known	chr17	-	3548	23	FSM	ENSG00000108395.14	ENST00000393065.6	3548	23	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_22	66.0128493627698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTGTTTAAATAATC	26	True	NA	NA	False	NA	NA	NA	59106826	58998986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59106440
transcript_81635.nic	chr17	-	1963	15	ISM	ENSG00000108395.14	ENST00000393065.6	3548	23	-54	48717	0	13385	5prime_fragment	FALSE	canonical	3	59	junction_14	72.4969035228965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATATTGATGAAGAAACTA	24	False	59106904	NA	False	AATACA	-9	NA	59106880	59047703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59106440
transcript_81638.known	chr17	-	353	4	FSM	ENSG00000108395.14	ENST00000584889.3	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	36.3532055746884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTAGTTGCCTTTTAG	436	False	NA	NA	False	NA	NA	NA	59106468	59088225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59088408_59091299_59091341_59104292_59104395_59106440
transcript_81640.known	chr17	-	894	5	FSM	ENSG00000182628.13	ENST00000578519.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	258.258954346214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGCTTTGTAAATTAAA	11	True	NA	-7	True	CATAAA	-32	NA	59155182	59111889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119318_59119496_59124306_59124429_59131280_59131368_59155130
transcript_81641.known	chr17	-	2809	4	FSM	ENSG00000182628.13	ENST00000330137.12	2809	4	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_2	73.769912566032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTGTCTTTATGTCTT	7	True	NA	1	True	NA	NA	NA	59155186	59109856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59155130
transcript_81642.known	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	221.64887146616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	19	True	NA	-74	True	AATATA	-6	NA	59155174	59112090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
transcript_81643.known	chr17	-	570	4	FSM	ENSG00000182628.13	ENST00000583976.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	186.483839037656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAATTCTAACAGAGAA	16	True	NA	NA	False	AAGAAA	-11	NA	59155177	59112261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59154955
transcript_81649.known	chr17	-	595	3	FSM	ENSG00000182628.13	ENST00000581068.5	595	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGATAATATAGATGTT	-4	True	NA	61	True	NA	NA	NA	59155248	59111955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59131280_59131368_59155130
transcript_81651.known	chr17	-	689	3	FSM	ENSG00000182628.13	ENST00000578105.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	214.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTGTAAATTAAAGT	9	True	NA	-5	True	CATAAA	-34	NA	59155184	59111887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119318_59119496_59155130
transcript_81652.known	chr17	-	625	3	FSM	ENSG00000182628.13	ENST00000437036.6	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	96.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTACACACGCATGCAC	-1	True	NA	-30	True	AATAAA	-42	NA	59155194	59112046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59131280_59131368_59154955
transcript_81655.known	chr17	+	1338	2	FSM	ENSG00000224738.2	ENST00000451775.2	1524	2	0	186	0	-186	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAATCCTCT	153	False	NA	NA	False	NA	NA	NA	59106597	59118267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59107592_59117923
transcript_81657.known	chr17	-	533	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	516	False	NA	-60	True	NA	NA	NA	59155260	59111942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59155130
transcript_8166.nnic	chr1	+	3394	22	NNC	ENSG00000066135.13	novel	1023	8	NA	NA	-33	-1035	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	69.3050373971242	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAATAACCGACCCA	-2	True	NA	NA	False	AAAAAG	-5	NA	43650502	43704483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43650550_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_81668.known	chr17	+	6226	10	FSM	ENSG00000068489.13	ENST00000262293.9	6226	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	8.12099853983182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTTTTTAAACTAGAAA	-10	True	NA	NA	False	AATAAA	-34	NA	59155745	59206709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562
transcript_8167.nnic	chr1	+	4423	22	NNC	ENSG00000066135.13	novel	1023	8	NA	NA	-86	-59	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	69.3050373971242	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAAAACTGGTGCA	261	False	NA	18	True	TATAAA	-6	NA	43650449	43705459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43650550_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_81676.known	chr17	+	3221	4	FSM	ENSG00000167447.13	ENST00000300917.10	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	22.7596133534821	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATACATGGATGATA	5	True	NA	1	True	AATAAA	-23	NA	59210034	59215230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59211811_59212340_59212487_59212728_59213602_59214804
transcript_81677.nnic	chr17	+	989	3	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-403	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGGTAGTGACGTTA	NA	False	NA	NA	False	NA	NA	NA	59155328	59203852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_59155806_59169747_59169843_59203435
transcript_81681.known	chr17	+	3241	10	FSM	ENSG00000153982.11	ENST00000284116.9	3241	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.57994645755099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTCTTCATTCTTT	7	True	NA	NA	False	AATAAA	-17	NA	59220510	59275970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784_59272837_59273650
transcript_81683.known	chr17	+	738	4	FSM	ENSG00000153982.11	ENST00000583543.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.96655480858378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATACAAAAAATATTA	4	True	NA	NA	False	NA	NA	NA	59220681	59249228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739
transcript_81685.known	chr17	+	5264	5	FSM	ENSG00000175155.11	ENST00000312655.9	5264	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	6.65206734782504	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGAAGAGCTCATCTG	-26	True	NA	16	True	AATAAA	-17	NA	59331654	59401729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59331825_59353214_59353527_59388326_59388371_59389359_59389469_59397100
transcript_81687.known	chr17	+	3193	2	FSM	ENSG00000175155.11	ENST00000582192.1	3193	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTGA	40	True	NA	NA	False	NA	NA	NA	59331720	59356303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59331825_59353214
transcript_81688.known	chr17	+	3575	18	FSM	ENSG00000108406.10	ENST00000251241.9	3575	18	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	19.3458774879442	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	-12	True	NA	15	True	AATAAA	-27	NA	59565609	59608345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59586152_59586234_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_81692.known	chr17	+	814	5	FSM	ENSG00000108406.10	ENST00000580218.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	52.3282906275372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCAGTATCAAGTTAAAA	NA	False	NA	NA	False	AATGAA	-37	NA	59565557	59574259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59565784_59566626_59566795_59573115_59573236_59573739_59573968_59574187
transcript_81695.known	chr17	+	3686	12	FSM	ENSG00000062716.13	ENST00000262291.9	3686	12	0	0	0	0	multi-exon	TRUE	canonical	3	578	junction_5	35.5841454156016	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAAGTCTCATTTT	-25	True	NA	5	True	AATAAA	-36	NA	59707653	59842255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59707749_59731420_59731523_59735337_59735474_59737452_59737544_59738836_59738948_59764970_59765139_59773753_59773886_59808795_59808877_59811669_59811787_59817711_59817774_59838294_59838398_59839767
transcript_81709.nic	chr17	+	6181	33	NIC	ENSG00000141367.12	novel	8369	32	NA	NA	-10	-346	combination_of_known_junctions	FALSE	canonical	3	61	junction_31	345.493678431223	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATAGAATTGAAGTTTT	0	True	NA	22	True	AATAAA	-18	NA	59619913	59694766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59687000_59687022_59690635_59690712_59693727
transcript_81711.known	chr17	+	8369	32	FSM	ENSG00000141367.12	ENST00000269122.8	8369	32	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_7	157.724281616517	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	-19	True	NA	NA	False	TATAAA	-3	NA	59619894	59696956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59693727
transcript_81715.known	chr17	+	5292	31	FSM	ENSG00000141367.12	ENST00000393043.5	5292	31	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_7	148.569983509456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTACTGTCTGA	-7	True	NA	NA	False	AATACA	-36	NA	59619857	59690826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635
transcript_81718.nic	chr17	+	3121	17	ISM	ENSG00000141367.12	ENST00000393043.5	5292	31	-203	13790	-34	-105	5prime_fragment	FALSE	canonical	3	1075	junction_7	101.340931390036	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACATAGACAGTAATAAC	35	False	NA	NA	False	NA	NA	NA	59619654	59677036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953
transcript_8172.nic	chr1	+	3565	22	NIC	ENSG00000066135.13	novel	1023	8	NA	NA	-79	-1035	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	58.6182159238512	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAATAACCGACCCA	268	False	NA	NA	False	AAAAAG	-5	NA	43650456	43704483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43650675_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_81725.known	chr17	-	2246	3	FSM	ENSG00000141378.15	ENST00000409433.2	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	4.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	NA	False	NA	-17	True	AATAAA	-17	NA	59707626	59697307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59697979_59698870_59700190_59707370
transcript_81726.known	chr17	-	731	2	FSM	ENSG00000141378.15	ENST00000393038.3	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	3	True	NA	-17	True	AATAAA	-17	NA	59707430	59697307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59697979_59707370
transcript_81727.known	chr17	-	1162	1	FSM	ENSG00000273702.1	ENST00000611877.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGCCTTTTATCTTT	206	False	NA	NA	False	AATAAA	-16	NA	59619714	59618552	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59618600_59619700
transcript_81728.known	chr17	-	2491	9	FSM	ENSG00000108423.15	ENST00000325752.8	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	16.684105459988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-30	True	NA	-13	True	AATAAA	-27	NA	59892943	59859478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_8173.nic	chr1	+	4541	22	NIC	ENSG00000066135.13	novel	1023	8	NA	NA	-79	-59	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	58.6182159238512	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAAAACTGGTGCA	268	False	NA	18	True	TATAAA	-6	NA	43650456	43705459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43650675_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_81735.known	chr17	-	1769	8	FSM	ENSG00000108423.15	ENST00000340993.10	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	26.4706229158103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAAAGTTCCATTCT	-7	True	NA	NA	False	NA	NA	NA	59892920	59860012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_8174.nic	chr1	+	4600	22	NIC	ENSG00000066135.13	novel	1023	8	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	58.6182159238512	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	268	False	NA	17	True	AATAAA	-18	NA	43650456	43705518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43650675_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_81746.known	chr17	-	2184	7	FSM	ENSG00000108423.15	ENST00000613721.4	2184	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	34.1158158174312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGTAAATGTGTACTT	-32	True	NA	-16	True	AATAAA	-45	NA	59892945	59859481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59860425_59863663_59863848_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_81748.known	chr17	-	1027	6	FSM	ENSG00000108423.15	ENST00000539018.5	1027	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	32.1409396253439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATGGGAAAAGTATACC	20	True	NA	NA	False	NA	NA	NA	59892893	59860316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59892696
transcript_81752.known	chr17	+	5428	15	FSM	ENSG00000108443.14	ENST00000225577.9	5428	15	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_10	11.6726175299288	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTGCTGAGAAACTG	-6	True	NA	NA	False	AATAAA	-27	NA	59893120	59950574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59914634_59914704_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_81760.known	chr17	-	2122	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	16.431676725155	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	4	True	NA	NA	False	ATTAAA	-22	NA	59964740	59952239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
transcript_81761.known	chr17	-	1893	8	FSM	ENSG00000189050.16	ENST00000482446.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	20.2121402193063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTCTGGACGTCATA	10	True	NA	1	True	AATAAA	-14	NA	59964734	59952361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962539_59962617_59962826_59963285_59964607
transcript_81762.known	chr17	-	1809	7	FSM	ENSG00000189050.16	ENST00000466544.5	1809	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	21.7389818835504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTAATAAGTGAAAATAA	-17	True	NA	-33	True	NA	NA	NA	59964761	59952395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962826_59963285_59964607
transcript_81764.known	chr17	-	6108	20	FSM	ENSG00000068097.16	ENST00000184956.11	6108	20	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_12	13.6200927018782	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTTCAGATTTCTA	8	True	NA	NA	False	AATAAA	-34	NA	60078921	60041007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60044135_60046024_60046230_60047308_60047406_60048263_60048389_60049579_60049703_60050842_60050978_60055514_60055602_60056114_60056238_60057047_60057404_60059421_60059522_60059889_60060097_60066208_60066387_60067433_60067733_60069710_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_81768.nic	chr17	-	967	7	ISM	ENSG00000068097.16	ENST00000587003.5	3566	20	-21	26148	-20	98	5prime_fragment	FALSE	canonical	3	87	junction_3	14.3874945699382	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTATGTTTATTTAG	-13	True	NA	0	True	NA	NA	NA	60078942	60069710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_81773.known	chr17	-	447	3	FSM	ENSG00000261040.8	ENST00000566140.6	523	3	76	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACTATTTGAGTTATT	137	False	NA	0	True	AATAAA	-19	NA	60088293	60083565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60083767_60085054_60085204_60088196
transcript_81774.known	chr17	-	1361	3	FSM	ENSG00000267248.4	ENST00000658811.2	1374	3	12	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTTTGTTCTTGTCA	NA	False	NA	NA	False	AATAAA	-29	NA	60135704	60126530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60126866_60132435_60132513_60134755
transcript_81777.known	chr17	+	1123	8	FSM	ENSG00000167434.10	ENST00000300900.9	1123	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	5.35666664550076	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	0	True	NA	8	True	ATTAAA	-24	NA	60149972	60159546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60150093_60155313_60155368_60156559_60156716_60157426_60157573_60157689_60157789_60158060_60158128_60158282_60158447_60159229
transcript_81779.nic	chr17	+	1922	7	ISM	ENSG00000167434.10	ENST00000300900.9	1123	8	-16	0	15	0	intron_retention	TRUE	canonical	3	15	junction_3	4.63381292481928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	17	False	NA	8	True	ATTAAA	-24	NA	60149956	60159546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_60150093_60155313_60155368_60156559_60156716_60157426_60157573_60157689_60157789_60158060_60158128_60158282
transcript_81781.known	chr17	-	6937	34	FSM	ENSG00000170832.13	ENST00000300896.9	6937	34	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_27	31.3445557535957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAACTGTATAAAAAGTA	-2	True	NA	-50	True	AATAAA	-21	NA	60392133	60177326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_81784.nic	chr17	-	2170	16	ISM	ENSG00000170832.13	ENST00000300896.9	6937	34	-10	42244	-10	0	5prime_fragment	FALSE	canonical	3	164	junction_9	24.1826384003069	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGTGAAAACTA	-12	True	NA	NA	False	NA	NA	NA	60392143	60219570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_81785.known	chr17	-	430	3	FSM	ENSG00000170832.13	ENST00000589761.1	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCATTAGAGAAATATA	427	False	NA	NA	False	AATAAA	-24	NA	60391928	60301449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60301705_60345480_60345609_60391881
transcript_81788.known	chr17	-	6492	13	FSM	ENSG00000062725.10	ENST00000083182.8	6492	13	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_1	9.9173669220548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTGTATCTGTTTCC	-14	True	NA	-10	True	AATAAA	-16	NA	60526242	60443157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60447835_60451879_60452046_60454301_60454493_60456295_60456382_60460662_60460788_60461809_60461916_60461993_60462062_60464020_60464111_60466290_60466460_60479147_60479272_60494465_60494618_60500398_60500488_60525793
transcript_81793.nic	chr17	-	924	2	ISM	ENSG00000062725.10	ENST00000585368.1	447	4	-119	5539	0	-5539	intron_retention	FALSE	canonical	3	88	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACATTGTGCAAC	-14	True	NA	NA	False	NA	NA	NA	60526242	60500012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_60500488_60525793
transcript_81794.known	chr17	+	932	1	FSM	ENSG00000259349.3	ENST00000661567.1	932	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTCTATATAAATTC	8	True	NA	NA	False	AATAAA	-13	NA	60526303	60527235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60526300_60527200
transcript_81795.known	chr17	+	4768	6	FSM	ENSG00000170836.13	ENST00000305921.8	4768	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	4.02988833592198	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGAATAATTTTTTTTT	-21	True	NA	NA	False	AATAAA	-17	NA	60600192	60666280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60600887_60623520_60623750_60633852_60633978_60647891_60648083_60656598_60656842_60662994
transcript_81801.known	chr17	-	8182	20	FSM	ENSG00000136492.10	ENST00000259008.7	8182	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	21.4669752161488	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTTTAGGGCTGCT	-26	True	NA	NA	False	ATTAAA	-15	NA	61863528	61679138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_61684141_61685835_61686166_61693429_61693513_61715950_61716064_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_81803.known	chr17	-	6128	25	FSM	ENSG00000108506.13	ENST00000251334.7	6128	25	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_24	19.630926210673	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	0	True	NA	-1	True	TATAAA	-25	NA	61927982	61865366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927653
transcript_81804.known	chr17	-	5878	25	FSM	ENSG00000108506.13	ENST00000444766.7	5878	25	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_24	22.3879928136093	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTAGTTTTTGTGTT	NA	False	NA	-4	True	TATAAA	-22	NA	61928016	61865369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927934
transcript_81807.known	chr17	+	5799	9	FSM	ENSG00000087995.16	ENST00000311506.10	5799	9	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_8	23.0908531674341	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGGCTCTGAATGGTA	7	True	NA	NA	False	AATAAA	-16	NA	62423896	62453385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62424013_62424218_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_81809.known	chr17	+	1556	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	0	0	0	0	multi-exon	TRUE	canonical	3	255	junction_7	24.5755810444732	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	NA	False	NA	-15	True	NA	NA	NA	62423874	62448914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_81810.known	chr17	+	5640	22	FSM	ENSG00000146872.19	ENST00000346027.10	5640	22	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	67.2455479479561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGCCTCTTGATTTG	NA	False	NA	9	True	ATTAAA	-20	NA	62478824	62615481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_81813.known	chr17	+	5350	21	FSM	ENSG00000146872.19	ENST00000683104.1	5350	21	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	67.6549148251625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	183	False	NA	-28	True	ATTAAA	-43	NA	62479301	62615444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62479614_62481123_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_81840.known	chr17	-	1154	1	FSM	ENSG00000274565.1	ENST00000611274.1	1154	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTGTTTCCTATCTTG	461	False	NA	-14	True	AATAAA	-14	NA	62627590	62626436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_62626400_62627600
transcript_81846.known	chr17	+	5719	30	FSM	ENSG00000011028.14	ENST00000303375.10	5719	30	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	28.8436269511239	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTGCCTTGTCCTGTGG	-2	True	NA	17	True	AATAAA	-27	NA	62627669	62693597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62627921_62664547_62664950_62666093_62666268_62666454_62666620_62666756_62666871_62667389_62667534_62671648_62671838_62671997_62672153_62674062_62674171_62675789_62675906_62676382_62676532_62677268_62677487_62678503_62678647_62679799_62679903_62680169_62680309_62680417_62680454_62680799_62680961_62681061_62681130_62681836_62681938_62682234_62682378_62688288_62688404_62688500_62688665_62688851_62688961_62689521_62689761_62689893_62690063_62690155_62690306_62690641_62690762_62690948_62691129_62692111_62692139_62692230
transcript_81856.known	chr17	+	2025	11	FSM	ENSG00000011028.14	ENST00000584265.1	2025	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	15.1472769830092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGGCTTCCCCATAA	13	False	NA	NA	False	NA	NA	NA	62627684	62676604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62627921_62664547_62664950_62666093_62666268_62666454_62666620_62666756_62666871_62667389_62667534_62671648_62671838_62671997_62672153_62674062_62674171_62675789_62675906_62676382
transcript_81858.nic	chr17	+	1435	2	ISM	ENSG00000011028.14	ENST00000584265.1	2025	11	-299	11157	-284	-11157	5prime_fragment	FALSE	canonical	3	145	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTCAAAGCATTTAAT	12	True	NA	NA	False	AAAAAG	-23	NA	62627385	62665447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_62627921_62664547
transcript_81862.known	chr17	-	1193	6	FSM	ENSG00000008283.16	ENST00000582034.5	1193	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	51.8443825308008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACACGTGGCACAAATGG	11	True	NA	NA	False	NA	NA	NA	63446306	63433963	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437485_63446244
transcript_81863.known	chr17	-	3151	6	FSM	ENSG00000008283.16	ENST00000392976.5	3151	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	37.075059001976	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTCGCCTGTTATCT	2	True	NA	-10	True	AATAAA	-11	NA	63446184	63432306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63445897
transcript_81864.known	chr17	-	2929	6	FSM	ENSG00000008283.16	ENST00000360793.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	17.4126390877431	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCGCCTGTTATCTTCC	11	True	NA	-7	True	AATAAA	-14	NA	63446306	63432303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63446244
transcript_81876.known	chr17	-	869	5	FSM	ENSG00000008283.16	ENST00000581163.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	56.1977535138194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGTCAGGTCTCCGCC	9934	False	NA	NA	False	NA	NA	NA	63436706	63434260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63436532
transcript_81884.known	chr17	+	4962	25	FSM	ENSG00000159640.17	ENST00000290866.10	4962	25	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.49517488227346	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAAGCCCTGTTGACGT	0	True	NA	10	True	AATAAA	-22	NA	63477060	63498373	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63477344_63477930_63478099_63479006_63479101_63479768_63479913_63480336_63480529_63481090_63481189_63481565_63481739_63482465_63482690_63483028_63483174_63483459_63483559_63483848_63483972_63484329_63484542_63485235_63485373_63486556_63486716_63486985_63487074_63488647_63488792_63488940_63489133_63490953_63491052_63491208_63491382_63493435_63493660_63493921_63494067_63494371_63494471_63496393_63496517_63496797_63496986_63497136
transcript_81899.known	chr17	+	2928	14	FSM	ENSG00000173826.15	ENST00000456941.6	2928	14	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_6	4.73311386551236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATCCTGGCTAACACGG	-17	True	NA	NA	False	NA	NA	NA	63523333	63546032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63535824_63535982_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544248_63544412_63545077_63545265_63545608
transcript_81900.known	chr17	+	3821	14	FSM	ENSG00000173826.15	ENST00000583023.1	3821	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	4.89172710633374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTGTAACTTATCTG	52	False	NA	4	True	AATAAA	-20	NA	63523402	63546727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544011_63544120_63544248_63544412_63545077_63545265_63545608
transcript_81904.known	chr17	+	3758	13	FSM	ENSG00000173826.15	ENST00000314672.10	3758	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	4.38669072941729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTGTAACTTATCTG	7	True	NA	4	True	AATAAA	-20	NA	63523357	63546727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544248_63544412_63545077_63545265_63545608
transcript_8191.known	chr1	-	3389	4	FSM	ENSG00000236200.7	ENST00000659644.2	3391	4	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_3	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGGCGTGAACCTGGG	-2	True	NA	NA	False	NA	NA	NA	43707369	43699839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43702729_43703563_43703648_43704352_43704458_43707058
transcript_81912.known	chr17	+	1703	6	FSM	ENSG00000173826.15	ENST00000580652.5	1703	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.03960780543711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGGTGTGTGCACCAA	6	True	NA	NA	False	AATGAA	-3	NA	63523356	63536213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668
transcript_81916.known	chr17	+	1367	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	260	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	85.5216883817986	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	0	True	NA	44	True	AATAAA	-27	NA	63550481	63594279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
transcript_81917.known	chr17	+	6324	7	FSM	ENSG00000136485.16	ENST00000614556.5	6324	7	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	22.0504472113883	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGACTGAATTTCTTT	-5	True	NA	31	True	AATAAA	-14	NA	63550476	63594266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999
transcript_81929.known	chr17	+	1218	5	FSM	ENSG00000136463.9	ENST00000684587.1	1218	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	92.25609735947	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCTTAATAATAACGGTG	119	False	NA	-14	True	NA	NA	NA	63601083	63608329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63601364_63604536_63604641_63606312_63606441_63607286_63607465_63607801
transcript_81933.known	chr17	+	2304	4	FSM	ENSG00000136463.9	ENST00000581120.1	2304	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	17.2497987105808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGTTGTATGGCTCTT	-2	True	NA	21	True	NA	NA	NA	63600881	63608364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63601364_63604533_63604641_63606312_63607465_63607801
transcript_81935.known	chr17	+	4148	19	FSM	ENSG00000198231.14	ENST00000583590.5	4148	19	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	113.435153063842	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	82	False	NA	11	True	AGTAAA	-17	NA	63773883	63819317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63774092_63774188_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_81940.known	chr17	+	2783	17	FSM	ENSG00000198231.14	ENST00000359353.9	2783	17	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	120.034223635387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGATGTGCTAAAGCGTG	12	True	NA	NA	False	AAGAAA	-19	NA	63774189	63818398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63774377_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_81943.known	chr17	-	2195	14	FSM	ENSG00000108588.15	ENST00000403162.7	2195	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	265.004454579061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGTCTACATTAAAC	10	True	NA	-6	True	AATAAA	-17	NA	63773570	63746402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63772776_63772864_63773411
transcript_81948.known	chr17	-	2166	13	FSM	ENSG00000266173.7	ENST00000336174.12	2166	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	54.2240081103892	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	11	True	NA	-18	True	ATTAAA	-25	NA	63741799	63702831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_81951.known	chr17	-	3283	13	FSM	ENSG00000108588.15	ENST00000225726.10	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_3	54.8723265610473	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	-17	True	NA	-6	True	ATTAAA	-14	NA	63773597	63745254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_81956.known	chr17	-	2209	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_10	39.1065507818011	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	2	True	NA	-21	True	ATTAAA	-22	NA	63741874	63702834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_81957.known	chr17	-	2140	12	FSM	ENSG00000266173.7	ENST00000638702.1	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	43.8540027103457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGGCATTGTGTCTG	-22	True	NA	-24	True	ATTAAA	-19	NA	63741832	63702837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728357_63728414_63741740
transcript_81958.known	chr17	-	1865	12	FSM	ENSG00000266173.7	ENST00000638276.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	47.8848481013144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGTGTGTGCCTCAT	11	True	NA	NA	False	NA	NA	NA	63741799	63703012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_81961.known	chr17	-	1719	12	FSM	ENSG00000108588.15	ENST00000582252.1	1719	12	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	50.704784849278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCGTGCCACACTGAGT	10	True	NA	NA	False	AATAAA	-15	NA	63773570	63751769	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_81964.known	chr17	-	1383	11	FSM	ENSG00000266173.7	ENST00000638309.1	1383	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	64.1037440404225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCCTGAGTGACAG	14	True	NA	NA	False	NA	NA	NA	63741796	63704483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704909_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_81968.known	chr17	-	2153	11	FSM	ENSG00000266173.7	ENST00000638708.1	2153	11	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_9	40.532086055371	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	16	False	NA	-5	True	ATTAAA	-38	NA	63741860	63702818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_81970.known	chr17	-	2130	11	FSM	ENSG00000266173.7	ENST00000639835.1	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	38.5180477179205	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	15	False	NA	-5	True	ATTAAA	-38	NA	63741861	63702818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_81975.known	chr17	-	1238	11	FSM	ENSG00000266173.7	ENST00000582137.6	1238	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	50.2980118891393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTGGCCTGGTAACA	1	True	NA	NA	False	NA	NA	NA	63741875	63703657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_81976.known	chr17	-	1925	11	FSM	ENSG00000266173.7	ENST00000640086.1	1925	11	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	48.8114740609214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTTTCGTTGTCAG	-5	True	NA	-73	True	NA	NA	NA	63741815	63702886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_81978.nic	chr17	-	1448	11	ISM	ENSG00000108588.15	ENST00000582252.1	1719	12	-66	549	-39	461	5prime_fragment	FALSE	canonical	3	644	junction_1	43.191318572139	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACCCAATGCCTGTATT	584	False	NA	NA	False	GATAAA	-29	NA	63773636	63752318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_81981.known	chr17	-	2959	10	FSM	ENSG00000266173.7	ENST00000245865.10	2959	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.5566410010427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	49	True	NA	-21	True	ATTAAA	-22	NA	63741761	63702834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704909_63706634_63706731_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_81989.known	chr17	-	1153	9	FSM	ENSG00000266173.7	ENST00000578008.6	1153	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	54.8940741337351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCCTCCCCAGATG	41	True	NA	NA	False	NA	NA	NA	63741769	63704599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704909_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_8199.known	chr1	+	3883	20	FSM	ENSG00000117408.11	ENST00000372343.8	3883	20	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_5	15.9844106879657	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGCATACATTTATTTA	1	True	NA	13	True	ATTAAA	-17	NA	43946949	43968022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43961014_43961165_43961263_43964268_43964322_43966574_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
transcript_81993.known	chr17	-	1168	9	FSM	ENSG00000266173.7	ENST00000579340.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	55.0817574156816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTGTCAGAGGCCA	-22	True	NA	NA	False	NA	NA	NA	63741832	63704207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704583_63706634_63706740_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_82004.known	chr17	-	602	5	FSM	ENSG00000136490.9	ENST00000578993.5	602	5	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	488.157953433108	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTTCCTGCTTCG	18	True	NA	NA	False	NA	NA	NA	63700102	63698334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698819_63699027_63699070_63699256_63699349_63700031
transcript_82006.known	chr17	-	756	5	FSM	ENSG00000136490.9	ENST00000578061.5	756	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	504.427150339868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCCCTGGGAGGCCCC	4538	False	NA	NA	False	NA	NA	NA	63699861	63698288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699802
transcript_82008.known	chr17	-	3192	5	FSM	ENSG00000136490.9	ENST00000259006.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_4	52.4690384893796	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGAGCCAGCATGTCC	-5	True	NA	-11	True	AATAAA	-24	NA	63700125	63695887	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700031
transcript_82011.known	chr17	-	566	5	FSM	ENSG00000136490.9	ENST00000584645.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	506.591736509786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAAGGAGCTCTGGGC	3	True	NA	NA	False	NA	NA	NA	63701172	63698608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700983
transcript_82014.known	chr17	-	1298	5	FSM	ENSG00000136490.9	ENST00000583211.5	1298	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	486.798918959358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCAATAGATCCAGAT	-12	True	NA	-36	True	TTTAAA	-2	NA	63700132	63697832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699114_63699256_63699349_63700031
transcript_82015.known	chr17	-	709	4	FSM	ENSG00000136490.9	ENST00000579814.1	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_3	59.7550555741242	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAGGTGGGAAGGGGA	-12	True	NA	NA	False	NA	NA	NA	63700132	63698466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63699070_63699256_63699349_63700031
transcript_82024.known	chr17	-	2019	3	FSM	ENSG00000136490.9	ENST00000578067.5	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	1182	junction_2	8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	12	True	NA	-19	True	AATAGA	-5	NA	63700108	63697815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63699070_63699256
transcript_82025.known	chr17	+	3959	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_5	51.2158063836684	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	-8	True	NA	11	True	AGTAAA	-17	NA	63774169	63819317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_82026.known	chr17	-	2788	2	FSM	ENSG00000266173.7	ENST00000578507.2	2788	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGACTCCGTCTCAAAG	-8	True	NA	NA	False	NA	NA	NA	63741818	63725703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63728414_63741740
transcript_82031.nic	chr17	-	3076	20	ISM	ENSG00000108592.17	ENST00000427159.7	3551	21	598	0	-1	0	intron_retention	FALSE	canonical	3	553	junction_6	60.8626353998217	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTTTTCTGACAGT	-1	True	NA	-8	True	AATAAA	-16	NA	63827065	63819432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_63819995_63820078_63820174_63820254_63820439_63820838_63820939_63821029_63821116_63821353_63821644_63821722_63821844_63821983_63822169_63823816_63823953_63824083_63824240_63824330_63824412_63824636_63824738_63824824_63824930_63825047_63825164_63825241_63825437_63825535_63825636_63826055_63826136_63826257_63826305_63826566_63826673_63826835
transcript_82039.known	chr17	+	1331	12	FSM	ENSG00000087191.13	ENST00000310144.11	1331	12	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_7	153.961248746892	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	-6	True	NA	25	True	AATAAA	-18	NA	63827430	63832019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_82041.known	chr17	+	1494	12	FSM	ENSG00000087191.13	ENST00000375812.8	1494	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	521.637472669058	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTCTGTTAATGAGG	207	False	NA	32	True	AATAAA	-25	NA	63827683	63832026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_82048.known	chr17	+	2586	11	FSM	ENSG00000087191.13	ENST00000579147.5	2586	11	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_6	158.531889536459	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	23	True	NA	25	True	AATAAA	-18	NA	63827459	63832019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63827515_63828137_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_82052.known	chr17	+	1680	12	FSM	ENSG00000087191.13	ENST00000578570.5	1680	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	521.637472669058	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGGACTCCAGTCTGT	13	False	NA	24	True	AATAAA	-17	NA	63827489	63832018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_82059.known	chr17	-	2342	14	NNC	ENSG00000108604.17	novel	2464	13	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	237.246756919118	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCCTGGACCTGGTCC	32	True	NA	-12	True	AATAAA	-16	NA	63842674	63832080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458_63842507_63842617
transcript_82061.known	chr17	-	1800	13	FSM	ENSG00000108604.17	ENST00000225742.13	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	242.949740458575	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGGTCAGAGCTGGC	-4	True	NA	NA	False	NA	NA	NA	63842466	63832603	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842380
transcript_82062.known	chr17	-	2464	13	FSM	ENSG00000108604.17	ENST00000448276.7	2464	13	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_2	38.5518229861515	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCCTGGACCTGGTCC	21	True	NA	-12	True	AATAAA	-16	NA	63842685	63832080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458
transcript_82065.known	chr17	-	1246	6	FSM	ENSG00000007312.13	ENST00000006750.8	1246	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-7	True	NA	-3	True	AATAAA	-21	NA	63932331	63928739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931386_63932194
transcript_82066.known	chr17	-	1254	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.99332590941915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-12	True	NA	-3	True	AATAAA	-21	NA	63932336	63928739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
transcript_82075.known	chr17	+	3128	6	FSM	ENSG00000224383.8	ENST00000412177.6	3128	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3.38230690505755	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTTAGATGGGCATT	-4	True	NA	NA	False	ATTAAA	-21	NA	63998350	64004305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63998425_63998706_63998783_63998967_63999075_64001083_64001311_64001466_64001538_64001732
transcript_82083.known	chr17	+	278	2	FSM	ENSG00000266402.4	ENST00000582965.2	290	2	12	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTCCGGCTGCTAG	-1	True	NA	31	True	NA	NA	NA	64145969	64146476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_64146001_64146229
transcript_82084.known	chr17	-	5244	12	FSM	ENSG00000136478.9	ENST00000584379.6	5244	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	10.5681573802259	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGTAACTGAGGGGGTAG	6	True	NA	NA	False	TTTAAA	-14	NA	64263260	64147226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64149092_64150840_64150962_64152944_64153155_64154841_64154968_64160800_64160934_64171099_64171200_64177324_64177472_64188167_64188416_64193558_64193890_64194894_64195096_64212573_64214243_64263167
transcript_82091.known	chr17	-	1557	9	FSM	ENSG00000256525.8	ENST00000671755.1	1557	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	63.0669287344802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAAATATTCTTCT	9974	False	NA	-33	True	NA	NA	NA	64496939	64477811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64483389_64483507_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_82097.known	chr17	-	1582	8	FSM	ENSG00000256525.8	ENST00000539111.7	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	11.8855082399723	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-15	True	NA	-6	True	AATAAA	-17	NA	64497054	64477784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_82098.nic	chr17	-	1474	8	NIC	ENSG00000256525.8	novel	1582	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	47.0644369401122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	9842	False	NA	-6	True	AATAAA	-17	NA	64497071	64477784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496531
transcript_82105.nic	chr17	-	2874	4	ISM	ENSG00000256525.8	ENST00000585141.5	1731	5	-74	3858	-39	1453	5prime_fragment	FALSE	canonical	3	135	junction_1	12.5521135891752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAGCAAAAACATAGGA	9820	False	NA	NA	False	AAAAAG	-13	NA	64497093	64489015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_64490970_64492666_64492773_64492894_64493022_64496406
transcript_82106.known	chr17	-	565	4	FSM	ENSG00000256525.8	ENST00000578997.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	60.9498883418903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGTGGAACCTAGGAGA	9888	False	NA	NA	False	AATAGA	-2	NA	64496755	64490861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64490970_64492666_64492773_64492894_64493022_64496531
transcript_82109.nnic	chr17	-	2929	20	NNC	ENSG00000108854.16	novel	6240	19	NA	NA	-16	-276	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	39.5345495664018	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTGGCTAAAAGAATCAT	12	True	NA	-1	True	AATAAA	-30	NA	64662323	64545343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_64545948_64546262_64546339_64547599_64547802_64551583_64551705_64554855_64554994_64555819_64555999_64557607_64557723_64561499_64561604_64562770_64562967_64571797_64571957_64578491_64578577_64580788_64580992_64583460_64583545_64586085_64586171_64591083_64591150_64593439_64593574_64598381_64598491_64606601_64606641_64661828_64661900_64662164
transcript_82112.known	chr17	+	2754	20	FSM	ENSG00000258890.8	ENST00000556440.7	2754	20	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_4	53.3092685782078	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	-14	True	NA	12	True	AATAAA	-16	NA	64506976	64537946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64519320_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
transcript_82116.known	chr17	-	4747	14	FSM	ENSG00000108654.16	ENST00000677726.1	4747	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	1454.57773209211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	392	False	NA	-8	True	AATAAA	-13	NA	64506521	64498258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64501260_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_82118.known	chr17	-	3998	14	FSM	ENSG00000108654.16	ENST00000678814.1	3998	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	1449.02803579527	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	392	False	NA	-8	True	AATAAA	-13	NA	64506521	64498258	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_82121.known	chr17	-	3868	14	FSM	ENSG00000108654.16	ENST00000577922.6	3868	14	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_13	1067.03991374025	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	182	False	NA	-7	True	AATAAA	-14	NA	64506731	64498257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506260_64506513
transcript_82122.known	chr17	-	4461	14	FSM	ENSG00000108654.16	ENST00000585111.2	4461	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	1078.94807416556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	NA	False	NA	-7	True	AATAAA	-14	NA	64507562	64498257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754
transcript_82127.known	chr17	-	3684	13	FSM	ENSG00000108654.16	ENST00000225792.10	3684	13	0	0	0	0	multi-exon	FALSE	canonical	3	3473	junction_2	264.756321401817	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-2	True	NA	-3	True	AATAAA	-18	NA	64506289	64498253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_82129.known	chr17	-	4283	13	FSM	ENSG00000108654.16	ENST00000676969.1	4283	13	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	1118.99050177182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTCTTTTTATTTA	392	False	NA	-6	True	AATAAA	-15	NA	64506521	64498256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_82137.known	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3649	junction_9	220.01945819284	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-2	True	NA	-7	True	AATAAA	-23	NA	64506289	64499615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_82141.nic	chr17	-	3806	11	NIC	ENSG00000108654.16	novel	3815	12	NA	NA	0	-8	intron_retention	FALSE	canonical	3	3649	junction_8	229.86178455759	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGGAAATTGTA	590	False	NA	-15	True	AATAAA	-43	NA	64506323	64499623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_82153.known	chr17	-	5014	11	FSM	ENSG00000214176.10	ENST00000582986.5	5014	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	8.39583229942095	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATATATGGTGTACGCT	0	True	NA	NA	False	NA	NA	NA	64837154	64782718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64785368_64786566_64786725_64787247_64787312_64792348_64792543_64797263_64797410_64799999_64800918_64804829_64805101_64821766_64822053_64822253_64822394_64829160_64829250_64837055
transcript_8216.nic	chr1	+	3522	11	ISM	ENSG00000117408.11	ENST00000372343.8	3883	20	-247	8537	-247	1936	5prime_fragment	FALSE	canonical	3	84	junction_5	12.7769323391806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGCTTACTCAATTCA	NA	False	NA	15	True	ATTAAA	-18	NA	43946702	43959485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745
transcript_82165.known	chr17	-	3425	5	FSM	ENSG00000214174.9	ENST00000430983.6	3430	5	5	0	-1	0	multi-exon	FALSE	canonical	3	54	junction_4	68.2440473594584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTATGTACTGTGGTT	10	True	NA	NA	False	AATATA	-18	NA	64975568	64966549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554
transcript_8217.nic	chr1	+	1886	2	ISM	ENSG00000117408.11	ENST00000372343.8	3883	20	-201	17656	-201	821	5prime_fragment	FALSE	canonical	3	104	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGACTCTCTTTTCCTT	NA	False	NA	NA	False	ATTAAA	-29	NA	43946748	43950366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_43947685_43949416
transcript_82174.known	chr17	-	2259	4	FSM	ENSG00000214174.9	ENST00000397713.5	2259	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	72.447682272566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	2	True	NA	72	True	AATAAA	-15	NA	64975576	64968037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64973518_64974554
transcript_82178.known	chr17	-	6249	4	FSM	ENSG00000120063.10	ENST00000439174.7	6249	4	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_1	6.59966329107444	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGATGTTATTTAACA	-34	True	NA	-5	True	AATAAA	-19	NA	65056740	65009288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65014830_65018252_65018304_65053501_65053729_65056310
transcript_82181.known	chr17	+	2387	19	FSM	ENSG00000108370.17	ENST00000584234.5	2387	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	5.14841459475693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTAACTTTAAGTTTCT	27	False	NA	-10	True	NA	NA	NA	65137453	65227678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65189285_65189316_65190174_65190237_65193542_65193657_65197125_65197242_65201992_65202081_65204162_65204302_65207921_65208012_65210487_65210606_65225001_65225487_65227274
transcript_82183.known	chr17	+	645	10	FSM	ENSG00000108370.17	ENST00000577186.1	645	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	5.16636797225008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGTATTAAGAAGAATA	91	False	NA	NA	False	NA	NA	NA	65137591	65180037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65179995
transcript_82189.known	chr17	+	2736	3	FSM	ENSG00000108370.17	ENST00000638125.1	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	11	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGATTTCGTTGATT	9	True	NA	16	True	TATAAA	-19	NA	65100811	65113130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_65101043_65101206_65101297_65110715
transcript_82191.nic	chr17	-	4475	11	NIC	ENSG00000168646.14	novel	4260	11	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	38.2869429440377	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	1281	False	NA	-5	True	ATTAAA	-19	NA	65560367	65528562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65559953
transcript_82192.known	chr17	-	4260	11	FSM	ENSG00000168646.14	ENST00000307078.10	4260	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	37.8085969059948	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	0	True	NA	-5	True	ATTAAA	-19	NA	65561648	65528562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
transcript_82196.nic	chr17	-	4280	10	NIC	ENSG00000168646.14	novel	4260	11	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	43.2292196563709	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	1281	False	NA	-5	True	ATTAAA	-19	NA	65560367	65528562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65559953
transcript_82197.known	chr17	-	4060	10	FSM	ENSG00000168646.14	ENST00000618960.4	4060	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	42.7681085753288	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCCTCGTCTTT	1	True	NA	-9	True	ATTAAA	-15	NA	65561647	65528566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
transcript_82202.known	chr17	-	3447	27	FSM	ENSG00000154240.17	ENST00000535342.7	3447	27	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	5.53151273487594	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTCTACTTTTTAT	-1	True	NA	1	True	ATTAAA	-21	NA	66192133	65635536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65635975_65637123_65637189_65640963_65641066_65689128_65689219_65743067_65743218_65750661_65750725_65851803_65852035_65902151_65902335_65927581_65927690_65961462_65961599_66005689_66005770_66027500_66027561_66028312_66028406_66029122_66029253_66029868_66030024_66053735_66053880_66062962_66063082_66066777_66066878_66069914_66070002_66096250_66096329_66096584_66096633_66129745_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_82208.known	chr17	+	10576	6	FSM	ENSG00000075429.9	ENST00000533854.6	10576	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.78885438199983	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATCTCTCTTTCTCAC	-1	True	NA	NA	False	AATAAA	-16	NA	66835116	66894751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_66835251_66877229_66877529_66878971_66879059_66880556_66880698_66884515_66884662_66884982
transcript_82212.known	chr17	+	3583	4	FSM	ENSG00000075461.6	ENST00000262138.4	3583	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTTCTTGATGTGGG	2	True	NA	12	True	AATAAA	-14	NA	66964706	67033398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_66965132_67018188_67018273_67024859_67025001_67030465
transcript_82213.known	chr17	-	13817	33	FSM	ENSG00000198265.12	ENST00000358691.10	13817	33	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_4	15.2801635605611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGATGTGTTTATTAT	-9	True	NA	-31	True	AATAAA	-16	NA	67245196	67070443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160363_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_82214.known	chr17	-	1872	14	FSM	ENSG00000198265.12	ENST00000417253.7	1872	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	12.5787460452545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGGCTATCTAGGGA	0	True	NA	NA	False	AATATA	-3	NA	67245187	67167525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_82215.known	chr17	-	6279	33	FSM	ENSG00000198265.12	ENST00000580168.5	6279	33	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	17.6895703293636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTAATTGTGCAACTA	4	True	NA	36	True	TTTAAA	-42	NA	67245183	67077971	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160366_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_82218.nnic	chr17	-	3607	12	NNC	ENSG00000197170.10	novel	4356	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	356.071076570743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	-13	True	NA	-3	True	AATAAA	-20	NA	67366599	67337915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_67338622_67339392_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_82220.nnic	chr17	-	3584	12	NNC	ENSG00000197170.10	novel	4356	11	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	356.071076570743	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTCTTTTCAGTTCT	-13	True	NA	-6	True	AATAAA	-17	NA	67366599	67337918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_67338602_67339392_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_82221.known	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_3	40.1950245677248	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	9	True	NA	-3	True	AATAAA	-20	NA	67366577	67337915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_82229.nic	chr17	-	757	6	ISM	ENSG00000197170.10	ENST00000584289.5	1090	8	-55	1731	-18	-1731	5prime_fragment	FALSE	canonical	3	1224	junction_5	23.979991659715	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGGTGAGCATATCTG	NA	False	NA	NA	False	AAGAAA	-30	NA	67366623	67347342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_82230.nic	chr17	-	620	6	ISM	ENSG00000197170.10	ENST00000584289.5	1090	8	-31	1844	6	-1844	5prime_fragment	FALSE	canonical	3	1224	junction_5	23.979991659715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGTGGAATTTATTTT	-13	True	NA	NA	False	AAGAAA	-1	NA	67366599	67347455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_82232.known	chr17	+	6182	10	FSM	ENSG00000154217.16	ENST00000580974.5	6182	10	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	88.4099597763415	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	20	True	NA	8	True	AATAAA	-17	NA	67377458	67697256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_82235.known	chr17	+	6241	9	FSM	ENSG00000154217.16	ENST00000581322.6	6241	9	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	100.294488258329	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	-30	True	NA	8	True	AATAAA	-17	NA	67377280	67697256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67692571
transcript_82236.nic	chr17	+	2048	9	NIC	ENSG00000154217.16	novel	6182	10	NA	NA	-31	-446	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	84.5501884977201	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTGTTGTTGTTTT	NA	False	NA	33	True	TATAAA	-23	NA	67377249	67692921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_67378203_67532801_67532951_67552256_67552346_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_82239.nic	chr17	+	2557	8	ISM	ENSG00000154217.16	ENST00000581322.6	6241	9	-309	21022	-309	-17133	5prime_fragment	FALSE	canonical	1	21	junction_3	97.6875485558786	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCCTCAACAAATATAT	NA	False	NA	NA	False	AAAAAG	-12	NA	67376971	67676234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478
transcript_8224.known	chr1	+	987	8	FSM	ENSG00000117410.14	ENST00000472174.7	987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_7	62.9330710244735	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	21	True	NA	28	True	AATAAA	-21	NA	43974959	43978295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_82251.known	chr17	+	2844	18	FSM	ENSG00000130935.10	ENST00000253247.9	2844	18	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_10	73.7682708585956	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTAATCTCTCAGTA	9	True	NA	NA	False	AATAAA	-15	NA	67717935	67744531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67718089_67719673_67719788_67719905_67719963_67721377_67721527_67722579_67722638_67724048_67724194_67726459_67726649_67734362_67734440_67735899_67736024_67736665_67736755_67737070_67737146_67737507_67737693_67737846_67737973_67738121_67738356_67738931_67739011_67739515_67739609_67743478_67743587_67743742
transcript_82265.known	chr17	+	2627	11	NNC	ENSG00000171634.19	novel	11292	30	NA	NA	-30	9804	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	54.0156458815407	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGGGTAAAATACACATT	417	False	NA	80	True	AAAAAG	-39	NA	67826111	67903882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893679_67893679_67893726_67894033_67894166_67903788
transcript_82270.known	chr17	+	7573	22	FSM	ENSG00000171634.19	ENST00000544778.6	7573	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	77.7704045743906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGTACAGTCTTCAACT	1	True	NA	NA	False	NA	NA	NA	67825523	67945891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408
transcript_82271.known	chr17	+	11075	28	FSM	ENSG00000171634.19	ENST00000306378.11	11075	28	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	73.3847369410848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGCAGTTTCTAATGA	-1	True	NA	11	True	AATAAA	-21	NA	67825502	67984378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67964211_67964405_67966571_67966657_67975771_67975959_67982251
transcript_82283.nic	chr17	+	1145	2	ISM	ENSG00000171634.19	ENST00000544778.6	7573	22	492	91129	-17	-37200	5prime_fragment	FALSE	canonical	3	112	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAATCTGGTCTTAA	321	False	NA	NA	False	NA	NA	NA	67826015	67854762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_67826338_67853939
transcript_82285.known	chr17	-	1082	3	FSM	ENSG00000186665.10	ENST00000449250.3	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	22	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAATAAAAAATAGT	25	True	NA	NA	False	ATTAAA	-5	NA	67993545	67991335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67992104_67993043_67993236_67993423
transcript_82287.nic	chr17	-	1558	2	ISM	ENSG00000186665.10	ENST00000449250.3	1082	3	-51	-237	-44	0	intron_retention	FALSE	canonical	3	136	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	-26	True	NA	-23	True	AATAAA	-19	NA	67993596	67991098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_67992104_67993043
transcript_82288.known	chr17	-	1654	2	FSM	ENSG00000186665.10	ENST00000536693.1	1654	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTGGATGCACCTGTT	18	True	NA	-26	True	AATAAA	-16	NA	67993552	67991101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67992104_67992900
transcript_82302.known	chr17	+	1977	11	FSM	ENSG00000182481.10	ENST00000330459.8	1977	11	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	342.90495767778	3671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-7	True	NA	20	True	AATAAA	-30	NA	68035734	68046854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_82313.known	chr17	+	2315	10	FSM	ENSG00000182481.10	ENST00000678388.1	2315	10	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	273.279443648782	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTAGATCATGTAGCTG	4	True	NA	-20	True	GGGGCT	-14	NA	68035712	68046588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771
transcript_82316.known	chr17	+	2741	10	FSM	ENSG00000182481.10	ENST00000676902.1	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	324.985127864851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGCTACTCA	-12	True	NA	NA	False	AGTAAA	-43	NA	68035729	68047364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044504_68045771_68045922_68046503
transcript_82318.known	chr17	+	2082	10	FSM	ENSG00000182481.10	ENST00000679346.1	2082	10	0	0	0	0	multi-exon	FALSE	canonical	3	4251	junction_4	337.709313236863	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-12	True	NA	20	True	AATAAA	-30	NA	68035729	68046854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_82319.known	chr17	+	3043	10	FSM	ENSG00000182481.10	ENST00000677419.1	3043	10	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_5	361.223469699476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGCTACTCA	-12	True	NA	NA	False	AGTAAA	-43	NA	68035729	68047364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_82326.known	chr17	+	1963	9	FSM	ENSG00000182481.10	ENST00000677918.1	1963	9	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	276.50517061169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAATCCCAGCTACTCA	4	True	NA	NA	False	NA	NA	NA	68035712	68044968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320
transcript_8233.known	chr1	+	1685	7	FSM	ENSG00000117410.14	ENST00000532642.5	1685	7	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_2	45.7566024379725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCACCTGTGTCCCCC	5	True	NA	-54	True	NA	NA	NA	43974943	43978213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025
transcript_82334.known	chr17	+	2303	8	FSM	ENSG00000182481.10	ENST00000677695.1	2303	8	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	217.235224715383	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGAAACTGTCTTAAAAAA	-12	True	NA	NA	False	NA	NA	NA	68035729	68045076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837
transcript_82351.nnic	chr17	+	931	5	FSM	ENSG00000237854.4	ENST00000692407.1	1357	5	-214	640	-210	-640	multi-exon	TRUE	canonical	3	29	junction_2	17.5071414000116	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAACAATTAAAAAAA	-30	True	NA	NA	False	AAAAAG	-7	NA	68101663	68125908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68101960_68102942_68103059_68114421_68114526_68125389_68125481_68125584
transcript_82355.known	chr17	+	2735	1	FSM	ENSG00000277476.1	ENST00000622750.1	2735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGTCTACTTACTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	68133200	68135935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68133200_68135900
transcript_82356.known	chr17	+	1339	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	228.140754977344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	-36	True	NA	4	True	AATAAA	-1	NA	68248034	68257139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_82359.known	chr17	+	1378	8	FSM	ENSG00000196704.14	ENST00000392720.6	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	213.972914555243	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCATCTTACTGG	-28	True	NA	19	True	AATAAA	-16	NA	68248042	68257154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248087_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_82365.known	chr17	+	1498	8	FSM	ENSG00000196704.14	ENST00000612294.4	1498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.410496716925	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTACTGGCCTGGTCTGT	277	False	NA	29	True	AATAAA	-26	NA	68248003	68257164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248158_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_82370.known	chr17	+	1932	7	FSM	ENSG00000196704.14	ENST00000359904.8	1932	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_3	37.5972812255827	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	-28	True	NA	20	True	AATAAA	-17	NA	68248042	68257155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_82373.known	chr17	+	1722	6	FSM	ENSG00000196704.14	ENST00000359783.8	1722	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	295.263678768656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATAATAAAAACTCTAG	-20	True	NA	-8	True	AATGAA	-8	NA	68248050	68257127	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248706_68250187_68250471_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_82375.known	chr17	+	2005	1	FSM	ENSG00000274712.2	ENST00000614046.1	2005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAGGAAAAAGGACCC	10	True	NA	16	True	AATAAA	-16	NA	68205488	68207493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68205500_68207500
transcript_82377.known	chr17	+	4642	12	FSM	ENSG00000141337.13	ENST00000448504.6	4642	12	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	5.8124972229621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	68259181	68422731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68259427_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_82379.known	chr17	+	2554	12	FSM	ENSG00000141337.13	ENST00000621439.5	2554	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	2.55193979047604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACACAGAGCAGACATT	-8	True	NA	22	True	AATAAA	-29	NA	68291494	68420814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68291569_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_82387.known	chr17	-	1804	12	FSM	ENSG00000070540.13	ENST00000589459.5	1804	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	63.0569727958916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACTAATAATAAAATCATG	-7	True	NA	-44	True	AATAAA	-30	NA	68457499	68421308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68457341
transcript_8239.known	chr1	+	944	7	FSM	ENSG00000117410.14	ENST00000236067.8	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	559.309519755286	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCAGCTTCTGTT	9	True	NA	22	True	AATAAA	-15	NA	43974947	43978289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975108_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_82390.nic	chr17	-	2111	12	ISM	ENSG00000070540.13	ENST00000589316.5	1886	13	-32	4061	-18	555	5prime_fragment	FALSE	canonical	0	0	junction_4	50.221492880115	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGTCAC	NA	False	NA	NA	False	AAAAAG	-12	NA	68457531	68425370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_82393.nic	chr17	-	2027	11	ISM	ENSG00000070540.13	ENST00000589459.5	1804	12	-31	4062	-17	555	5prime_fragment	FALSE	canonical	0	0	junction_4	64.9862293105239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGTCAC	NA	False	NA	NA	False	AAAAAG	-12	NA	68457530	68425370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68457341
transcript_82408.known	chr17	+	3697	12	FSM	ENSG00000108946.16	ENST00000536854.6	3697	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	651.826537286373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	-3	True	NA	NA	False	AATAAA	-21	NA	68512449	68532762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512549_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_82412.known	chr17	+	3576	11	FSM	ENSG00000108946.16	ENST00000358598.6	3576	11	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_1	473.126251649599	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	2	True	NA	NA	False	AATAAA	-21	NA	68512031	68532762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_82419.known	chr17	+	4253	11	FSM	ENSG00000108946.16	ENST00000589228.6	4253	11	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	181.078684554533	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGGGTTGACAGTCC	-23	True	NA	16	True	AATAAA	-17	NA	68512429	68533431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_82422.nic	chr17	+	1376	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_10	487.872565328283	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	318	False	NA	24	True	AATAAA	-25	NA	68512387	68551319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_82423.nnic	chr17	+	1645	11	NIC	ENSG00000108946.16	novel	3669	12	NA	NA	-189	0	combination_of_known_splicesites	FALSE	canonical	3	91	junction_1	497.633891530712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGCTGTTACTGCTT	240	False	NA	18	True	AATAAA	-18	NA	68512692	68530664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_68512971_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_82424.nnic	chr17	+	3714	11	NIC	ENSG00000108946.16	novel	3669	12	NA	NA	-160	0	combination_of_known_splicesites	FALSE	canonical	3	91	junction_1	497.633891530712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	-6	True	NA	NA	False	AATAAA	-21	NA	68512721	68532762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_68512971_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_82425.known	chr17	+	4327	11	FSM	ENSG00000108946.16	ENST00000392711.5	4327	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	513.373781956188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTCTCTGGGTT	309	False	NA	8	True	AATAAA	-9	NA	68512378	68533423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512580_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_82428.known	chr17	-	4688	11	FSM	ENSG00000108950.12	ENST00000592554.2	4688	11	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	23.1536174279528	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTCAAGTTACTACT	-1	True	NA	-14	True	AATAAA	-18	NA	68601367	68535115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_68537742_68539336_68539397_68539884_68539967_68540848_68540959_68541984_68542166_68542693_68542810_68543628_68543722_68551872_68551952_68554776_68554828_68555558_68555744_68600262
transcript_82432.known	chr17	+	680	5	FSM	ENSG00000108946.16	ENST00000585460.1	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	219.267388136038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTTTGGTTTTGTTT	-23	True	NA	NA	False	NA	NA	NA	68512429	68524130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015
transcript_82434.known	chr17	+	556	2	FSM	ENSG00000108946.16	ENST00000592194.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAATTCTTTGTAACTT	-38	True	NA	NA	False	AATAAA	-8	NA	68512414	68515815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512549_68515393
transcript_82436.known	chr17	+	3551	11	FSM	ENSG00000108946.16	ENST00000392710.8	3551	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	508.55683064924	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAATGAATCAGT	-3	True	NA	NA	False	AATAAA	-18	NA	68512449	68532759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512549_68515393_68515567_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_82439.known	chr17	+	13405	12	FSM	ENSG00000108984.15	ENST00000590474.7	13405	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	9.45279704113161	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTACATTAATTG	-14	True	NA	18	True	AATAAA	-20	NA	69414696	69553865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_8244.known	chr1	+	2466	6	FSM	ENSG00000132768.14	ENST00000255108.8	2466	6	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	16.6973051717934	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	10	True	NA	23	True	AATAAA	-15	NA	43970009	43973369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_82441.known	chr17	+	1512	12	FSM	ENSG00000108984.15	ENST00000589647.5	1512	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.0027071976633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAAGCTTCTCAGACTT	24	False	NA	38	True	ATTAAA	-24	NA	69502428	69542019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_69502686_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_82442.known	chr17	-	2282	4	FSM	ENSG00000227036.9	ENST00000650131.3	2292	4	0	10	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTATGACCATTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	72592829	72403321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72404817_72428235_72428299_72431127_72431225_72592202
transcript_82443.known	chr17	-	2208	3	FSM	ENSG00000227036.9	ENST00000649793.2	2208	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTATGACCATTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	72592852	72403321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72404817_72428235_72428299_72592202
transcript_82447.known	chr17	-	2752	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.137271518771	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTTACGTTCAG	-7	True	NA	-18	True	AATAAA	-16	NA	73092688	72645949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_82449.known	chr17	-	2737	10	FSM	ENSG00000133195.12	ENST00000255559.8	2732	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	43	junction_5	12.7956396894305	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTACGTTCAGT	-12	True	NA	-17	True	AATAAA	-17	NA	73092693	72645948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_82452.nic	chr17	+	3093	14	NIC	ENSG00000166685.13	novel	3014	14	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	28.2777852049038	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTCTGCTCATCTGAT	NA	False	NA	20	True	AATAAA	-25	NA	73192995	73208507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_73193385_73196486_73196752_73196899_73197082_73197225_73197397_73199864_73200022_73200565_73200777_73201108_73201901_73202999_73203147_73203631_73203794_73205552_73205681_73206153_73206263_73206707_73206818_73207180_73207257_73208313
transcript_82454.known	chr17	+	3014	14	FSM	ENSG00000166685.13	ENST00000299886.9	3014	14	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_3	13.3274641914787	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTCTGCTCATCTGAT	4	True	NA	20	True	AATAAA	-25	NA	73193054	73208507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73193385_73196506_73196752_73196899_73197082_73197225_73197397_73199864_73200022_73200565_73200777_73201108_73201901_73202999_73203147_73203631_73203794_73205552_73205681_73206153_73206263_73206707_73206818_73207180_73207257_73208313
transcript_82471.known	chr17	+	3618	6	FSM	ENSG00000141219.16	ENST00000535032.7	3618	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	64.2638311960935	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCCTGAGCTGATTA	1	True	NA	113	True	AATAAA	-22	NA	73232432	73248959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_82473.known	chr17	+	2075	6	FSM	ENSG00000141219.16	ENST00000426147.6	2075	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	79.3710274596468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATACAGGAAGTAAACG	-15	True	NA	NA	False	AATAAA	-26	NA	73232661	73245344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73245167
transcript_82474.known	chr17	+	3645	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	40.3910881259715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	11	False	NA	101	True	AATAAA	-10	NA	73232621	73248947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_82477.known	chr17	+	2049	5	FSM	ENSG00000141219.16	ENST00000577615.5	2049	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	85.8690864048291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGCTGAAACATAATGAA	33	True	NA	NA	False	AATAAA	-23	NA	73232464	73247530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_82478.known	chr17	-	2865	4	FSM	ENSG00000133193.13	ENST00000405159.8	2876	4	23	-12	-4	0	multi-exon	FALSE	canonical	3	112	junction_2	156.610628275634	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	-1	True	ATTAAA	-28	NA	73232371	73207352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73209769_73212677_73212741_73227164_73227265_73232085
transcript_82486.known	chr17	-	2798	3	FSM	ENSG00000133193.13	ENST00000403627.7	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	20.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	-1	True	ATTAAA	-28	NA	73232367	73207352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73209769_73227164_73227265_73232085
transcript_82489.known	chr17	+	7685	2	FSM	ENSG00000180616.9	ENST00000357585.4	7685	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGCGTATGTCTT	-9	True	NA	NA	False	ATTAAA	-21	NA	73165009	73176633	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73165289_73169227
transcript_82492.known	chr17	-	512	2	FSM	ENSG00000133193.13	ENST00000581110.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCTACAGCACCGAG	NA	False	NA	NA	False	NA	NA	NA	73232394	73209565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73209769_73232085
transcript_82494.known	chr17	-	1022	2	FSM	ENSG00000179604.10	ENST00000580315.1	1022	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAGAAGGGCACCAGTAAG	592	False	NA	NA	False	NA	NA	NA	73311408	73286118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73286613_73310880
transcript_82495.known	chr17	-	3098	2	FSM	ENSG00000179604.10	ENST00000335793.4	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGTGTCTGTCTCTGC	-1	True	NA	-2	True	ATTAAA	-18	NA	73312001	73283623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73286613_73311892
transcript_82499.known	chr17	+	431	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_1	5378.79602583143	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCGTCTTTGCGGA	NA	False	NA	15	True	ATTAAA	-17	NA	74203581	74209880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_82500.known	chr17	+	1145	5	FSM	ENSG00000172809.13	ENST00000311111.11	1145	5	0	0	0	0	multi-exon	FALSE	canonical	3	9748	junction_1	1936.87214020441	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGTGTTTTTTGTTTTTT	-6	True	NA	18	True	CATAAA	-19	NA	74203677	74210655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_82504.known	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5699.43179185434	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	9	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
transcript_82505.known	chr17	+	532	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	10545	junction_3	1626.41575933776	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	20	False	NA	31	True	ATTAAA	-33	NA	74203703	74209896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
transcript_82506.known	chr17	+	3433	14	FSM	ENSG00000141540.11	ENST00000269346.9	3433	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	4.46286452441855	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTTCCGTTTCTGACT	10	True	NA	NA	False	AATAAA	-16	NA	74213570	74262020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74213717_74222484_74222658_74230887_74231000_74237293_74237515_74243373_74243470_74243976_74244050_74249010_74249081_74249343_74249400_74249935_74250029_74250264_74250358_74252233_74252377_74253080_74253267_74253754_74253834_74260128
transcript_82511.known	chr17	+	3629	20	FSM	ENSG00000196169.15	ENST00000389916.5	3629	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.04925498251914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTGTTGGAAATTTGA	0	True	NA	18	True	AATAAA	-19	NA	74326225	74355820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74326389_74328424_74328506_74341875_74341987_74342629_74342718_74343023_74343161_74344222_74344349_74344760_74344956_74346377_74346525_74347776_74347900_74349183_74349350_74350400_74350576_74350706_74350906_74351866_74352138_74352218_74352341_74352820_74352955_74353195_74353302_74353493_74353582_74354161_74354560_74354781_74354942_74355181
transcript_82516.known	chr17	+	1205	2	FSM	ENSG00000196169.15	ENST00000551017.1	1205	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAACTGT	0	True	NA	NA	False	AAAAAG	-10	NA	74326225	74329466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74326389_74328424
transcript_82517.known	chr17	-	1727	3	FSM	ENSG00000204347.4	ENST00000375366.4	1727	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGATTGAACCACTCAG	17	True	NA	-6	True	AATAAA	-21	NA	74361868	74356415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74357732_74359968_74360246_74361734
transcript_82525.known	chr17	+	1592	4	FSM	ENSG00000170412.18	ENST00000481232.2	1592	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	82.4135911121461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	161	False	NA	27	True	AATAAA	-20	NA	74431527	74447429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74432142_74439744_74440047_74443817_74443913_74446848
transcript_82527.known	chr17	+	1813	4	FSM	ENSG00000170412.18	ENST00000392627.7	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6167322834318	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	-15	True	NA	27	True	AATAAA	-20	NA	74432087	74447429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848
transcript_82529.nic	chr17	+	2169	4	NIC	ENSG00000170412.18	novel	1813	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	39.7520090337862	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	11	True	NA	27	True	AATAAA	-20	NA	74432113	74447429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_74432524_74439744_74440828_74443817_74443913_74446848
transcript_82534.known	chr17	+	1638	7	FSM	ENSG00000167851.15	ENST00000360141.8	1638	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.26691175145591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	-26	True	NA	21	True	AGTAAA	-16	NA	74466633	74484794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74466744_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_82535.known	chr17	+	1785	7	FSM	ENSG00000167851.15	ENST00000648095.1	1785	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.62995563967658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	-1	True	NA	21	True	AGTAAA	-16	NA	74466398	74484794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74466656_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_82538.known	chr17	+	2613	9	FSM	ENSG00000172794.20	ENST00000392613.10	2613	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.26468052730799	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	4	True	NA	21	True	ATTAAA	-21	NA	74737255	74747335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_82539.known	chr17	+	2858	8	FSM	ENSG00000172794.20	ENST00000392610.5	2858	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.46757022031768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	9	True	NA	21	True	ATTAAA	-21	NA	74737231	74747335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007
transcript_82542.known	chr17	+	2528	8	FSM	ENSG00000172794.20	ENST00000392612.7	2528	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.23834069384271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	7	True	NA	21	True	ATTAAA	-21	NA	74737229	74747335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74737366_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_82557.known	chr17	+	1993	6	FSM	ENSG00000109062.12	ENST00000262613.10	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_1	30.8259630830896	3190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCCTCCGTGTGTT	-1	True	NA	37	True	NA	NA	NA	74748627	74769353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74749288_74762011_74762174_74763366_74763521_74766935_74766977_74768146_74768237_74768467
transcript_8256.known	chr1	+	2414	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	112.838645862134	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	10	True	NA	23	True	AATAAA	-15	NA	43970009	43973369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_82571.known	chr17	+	2195	3	FSM	ENSG00000172794.20	ENST00000488977.1	2195	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTCCACTGTTTCT	7589	False	NA	20	True	ATTAAA	-20	NA	74744840	74747334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74744930_74745007_74745085_74745305
transcript_82574.known	chr17	-	583	7	FSM	ENSG00000109065.12	ENST00000583476.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	86.0731278235741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAGAAGCCTTACAGA	10	True	NA	NA	False	NA	NA	NA	74776337	74771767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74771978_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_82581.known	chr17	-	1011	7	FSM	ENSG00000109065.12	ENST00000581136.5	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	75.4889616654868	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCTTTCTCCTTAGAG	23	True	NA	NA	False	NA	NA	NA	74776324	74771388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772040_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_82582.known	chr17	-	583	7	FSM	ENSG00000109065.12	ENST00000579218.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_6	81.5776725989818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTTCTGGAGCAGACCA	16	True	NA	NA	False	NA	NA	NA	74776331	74771793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776308
transcript_82583.known	chr17	-	839	7	FSM	ENSG00000109065.12	ENST00000578822.5	839	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	84.9027221131468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGGGTGTTGGGCCC	-2	True	NA	NA	False	NA	NA	NA	74776298	74771694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775853_74776266
transcript_82595.known	chr17	-	1993	6	FSM	ENSG00000109065.12	ENST00000583834.5	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_4	22.2387049982682	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCTCAGTATAAAACAAA	24	True	NA	-53	True	NA	NA	NA	74776323	74770580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_82597.nic	chr17	-	2210	6	NIC	ENSG00000109065.12	novel	1103	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	60	junction_2	69.5689585950516	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	-23	True	NA	-1	True	TATAAA	-38	NA	74776370	74770528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74771859_74771959_74772396_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_82604.known	chr17	-	573	6	FSM	ENSG00000109065.12	ENST00000582524.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	80.7375996670696	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCCTTACAGAGATG	-18	True	NA	NA	False	NA	NA	NA	74776365	74771763	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771835_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_82608.nic	chr17	-	2710	5	NIC	ENSG00000109065.12	novel	1993	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	207	junction_3	23.5624171086075	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	-23	True	NA	-1	True	TATAAA	-38	NA	74776370	74770528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74771859_74771959_74773040_74773575_74773686_74775621_74775708_74776266
transcript_82611.nic	chr17	-	3246	4	NIC	ENSG00000109065.12	novel	1993	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	207	junction_2	4.49691252107735	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	-23	True	NA	-1	True	TATAAA	-38	NA	74776370	74770528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74771859_74771959_74773686_74775621_74775708_74776266
transcript_82615.known	chr17	-	565	3	FSM	ENSG00000109065.12	ENST00000582993.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCATGTCCCTCACCAC	-20	True	NA	NA	False	GGGGCT	-23	NA	74776367	74773310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74773689_74775621_74775708_74776266
transcript_82616.known	chr17	-	418	2	FSM	ENSG00000109065.12	ENST00000579837.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAGCCAGGCATGGT	11	True	NA	NA	False	NA	NA	NA	74776336	74775359	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74775708_74776266
transcript_82619.nnic	chr17	+	2343	11	NNC	ENSG00000109066.14	novel	4703	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.6896943067059	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTCCCACATCACTCA	7493	False	NA	30	True	AATAAA	-15	NA	74776469	74839753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74835926_74836498_74838886
transcript_82624.known	chr17	+	4676	10	FSM	ENSG00000109066.14	ENST00000582330.2	4676	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	43.3319088084942	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTTTCCCACATCAC	10	True	NA	27	True	AATAAA	-12	NA	74776519	74839750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74776578_74777266_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74835926
transcript_82626.known	chr17	+	1740	10	FSM	ENSG00000109066.14	ENST00000582773.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	41.7692071587032	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	-10	True	NA	28	True	AATAAA	-13	NA	74776499	74839751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
transcript_82647.known	chr17	-	1809	13	FSM	ENSG00000161513.12	ENST00000413947.6	1809	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	69.1103686544614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACAGGTGGAGGTGTGGG	10	True	NA	-115	True	NA	NA	NA	74872976	74862608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872108_74872197_74872317_74872865
transcript_82659.known	chr17	-	1766	12	FSM	ENSG00000161513.12	ENST00000582944.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	52.0374944289815	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGGTTGGGAACATG	1	True	NA	-50	True	NA	NA	NA	74872985	74862543	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866877_74872035_74872134_74872865
transcript_82662.known	chr17	-	2482	12	FSM	ENSG00000161513.12	ENST00000578473.5	2482	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	62.7598071095646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGTTGATGGGGGA	11	False	74873017	-5	True	AATAAA	-15	NA	74873006	74862498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872242
transcript_82663.known	chr17	-	1912	12	FSM	ENSG00000161513.12	ENST00000577509.5	1912	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	64.8541911961168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGAGCCATGGTTGAT	18	True	NA	-11	True	AATAAA	-9	NA	74872968	74862504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872768
transcript_82664.known	chr17	-	1827	12	FSM	ENSG00000161513.12	ENST00000581530.5	1827	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	53.4930288190097	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCATGGTTGATGGGG	56	False	NA	-7	True	AATAAA	-13	NA	74872961	74862500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864950_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_82666.known	chr17	-	1967	12	FSM	ENSG00000161513.12	ENST00000442102.6	1967	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	54.5431817708314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGTTGGGAACATGCT	NA	False	NA	-48	True	NA	NA	NA	74873031	74862541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74867006_74872035_74872134_74872865
transcript_82674.known	chr17	-	1705	11	FSM	ENSG00000161513.12	ENST00000420580.6	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	65.2476053200422	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGTTGATGGGGGAC	12	True	NA	-4	True	AATAAA	-16	NA	74872974	74862497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866783_74866880_74872035_74872134_74872865
transcript_82705.known	chr17	-	1762	11	FSM	ENSG00000161513.12	ENST00000583917.5	1762	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	66.1528533020307	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACAGCTGCAACCAAG	2	True	NA	-24	True	NA	NA	NA	74873015	74862517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864346_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872865
transcript_82709.known	chr17	-	2174	6	FSM	ENSG00000172782.13	ENST00000612771.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.72046505340853	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATAACTTTGAATGT	14	True	NA	NA	False	AATAAA	-40	NA	74893633	74877301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74878478_74879403_74879584_74881067_74881256_74882529_74882711_74892522_74892690_74893351
transcript_82714.known	chr17	+	2150	7	FSM	ENSG00000183034.13	ENST00000331427.9	2150	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCACTGTTTGTCTCTGT	-2	True	NA	NA	False	AATAAA	-18	NA	74924272	74933912	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74924334_74924599_74924946_74925555_74925693_74927222_74927282_74927664_74927799_74930278_74931154_74933374
transcript_82716.known	chr17	-	3558	3	FSM	ENSG00000182040.9	ENST00000614341.5	3558	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTTGTCCTTTAATGC	-8	True	NA	0	True	NA	NA	NA	74923255	74916082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74918077_74919453_74920672_74922909
transcript_82721.nnic	chr17	-	3174	19	NNC	ENSG00000167861.16	novel	3298	19	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	23.6273147014213	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACTCTGTGGTTGAG	116	False	NA	-6	True	AATAAA	-15	NA	74972795	74950742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960090_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_82722.known	chr17	-	3298	19	FSM	ENSG00000167861.16	ENST00000425042.7	3298	19	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	16.9779268463496	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGTGGTTGAGG	-2	True	NA	-5	True	AATAAA	-16	NA	74972759	74950741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_8273.known	chr1	+	1664	7	FSM	ENSG00000117410.14	ENST00000473485.5	1664	7	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_6	67.9397200138149	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCAGCTTCTGTTGCC	33	True	NA	25	True	AATAAA	-18	NA	43974971	43978292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_82737.nic	chr17	-	1782	12	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-36	7227	-24	0	5prime_fragment	FALSE	canonical	3	80	junction_2	12.1824965889794	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTATCTATCATCAT	116	False	NA	NA	False	ATTAAA	-27	NA	74972795	74957968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_8274.known	chr1	+	2432	6	FSM	ENSG00000117410.14	ENST00000468183.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	48.7253527437206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	32	True	NA	28	True	AATAAA	-21	NA	43974970	43978295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025
transcript_82745.nic	chr17	-	1474	6	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-36	10524	-24	331	5prime_fragment	FALSE	canonical	3	85	junction_3	12.6901536633722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATTAATAATATAT	116	False	NA	NA	False	AATAAA	-5	NA	74972795	74961265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_82748.nic	chr17	-	2132	5	NIC	ENSG00000167861.16	novel	3298	19	NA	NA	-24	331	intron_retention	FALSE	canonical	3	94	junction_3	10.8282039138539	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATTAATAATATAT	116	False	NA	NA	False	AATAAA	-5	NA	74972795	74961265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74961990_74962233_74962341_74962964_74963911_74964482_74964633_74972590
transcript_82749.known	chr17	-	2341	4	FSM	ENSG00000167861.16	ENST00000528902.1	2341	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	9.8770215933527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAGTTAAAAA	-6	True	NA	NA	False	AATAGA	-24	NA	74972763	74961596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74961990_74962233_74962341_74962964_74964633_74972590
transcript_8275.nnic	chr1	+	2092	8	NNC	ENSG00000117411.18	novel	2193	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	234.233530773832	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	198	False	NA	14	True	AGTAAA	-14	NA	43979176	43991168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43979284_43979417_43979512_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_82755.known	chr17	+	3536	5	FSM	ENSG00000109089.7	ENST00000337231.5	3536	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	9.33742469849155	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCATCTCTGTGCATCT	5	True	NA	27	True	AATAAA	-29	NA	74987631	75005800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74988123_74999503_74999617_75001340_75001490_75002063_75002229_75003182
transcript_82756.nnic	chr17	+	3530	5	NNC	ENSG00000109089.7	novel	3536	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	40.5115724207294	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCATCTCTGTGCATCT	-16	True	NA	27	True	AATAAA	-29	NA	74987610	75005800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_74988123_74999503_74999617_75001340_75001490_75002063_75002229_75003209
transcript_82760.nic	chr17	+	4490	4	ISM	ENSG00000109089.7	ENST00000337231.5	3536	5	0	0	0	0	intron_retention	FALSE	canonical	3	99	junction_1	5.09901951359278	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCATCTCTGTGCATCT	5	True	NA	27	True	AATAAA	-29	NA	74987631	75005800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_74988123_74999503_74999617_75001340_75001490_75002063
transcript_82765.known	chr17	+	593	6	FSM	ENSG00000167862.10	ENST00000584208.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	100.511889843938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGCTGAGACAAAAGAG	-5	True	NA	NA	False	AAAACA	-9	NA	75012669	75020939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020466_75020658_75020920
transcript_82766.known	chr17	+	894	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	20.448960853794	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	-5	True	NA	11	True	AATAAA	-13	NA	75012669	75021261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
transcript_82768.known	chr17	+	3657	6	FSM	ENSG00000180901.11	ENST00000322444.7	3657	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	13.5144367252209	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTGGTGTGTTTTCCA	-5	True	NA	50	True	AATAAA	-24	NA	75047224	75065886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75047590_75049219_75049329_75053013_75053106_75059509_75059606_75062119_75062246_75063017
transcript_82769.known	chr17	-	609	6	FSM	ENSG00000167863.12	ENST00000301587.9	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	2482	junction_5	245.353133258982	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-1	True	NA	-18	True	ATTAAA	-16	NA	75046969	75038862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75039064_75039208_75039272_75040091_75040164_75042180_75042278_75042528_75042660_75046924
transcript_8277.nic	chr1	+	2056	7	NIC	ENSG00000117411.18	novel	360	2	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	248.289929092762	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	-2	True	NA	14	True	AGTAAA	-14	NA	43978918	43991168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43979084_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_82772.known	chr17	-	553	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1242.25822597397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-17	False	NA	-18	True	ATTAAA	-16	NA	75046985	75038862	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
transcript_82776.nic	chr17	-	353	4	ISM	ENSG00000167863.12	ENST00000301587.9	609	6	-14	1235	2	-1080	5prime_fragment	FALSE	canonical	3	2482	junction_3	308.339999927929	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGTAAGTAGTTGAGG	-15	True	NA	NA	False	GATAAA	-31	NA	75046983	75040097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_75040164_75042180_75042278_75042528_75042660_75046924
transcript_8278.nnic	chr1	+	1648	7	NNC	ENSG00000117411.18	novel	2193	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	247.919621831127	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	-14	True	NA	14	True	AGTAAA	-14	NA	43979211	43991168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43979264_43981403_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_82785.known	chr17	+	2019	7	FSM	ENSG00000170190.16	ENST00000580123.5	2019	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	31.4152298522017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	-7	True	NA	NA	False	AATAAA	-22	NA	75087726	75106162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75087897_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_82786.nic	chr17	+	2056	7	NIC	ENSG00000170190.16	novel	1940	7	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	29.4811615932766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	122	False	NA	NA	False	AATAAA	-22	NA	75087887	75106162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75099956_75100817_75103969_75104181_75105879
transcript_82788.known	chr17	+	1940	7	FSM	ENSG00000170190.16	ENST00000329783.9	1940	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	19.3857049280019	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	-11	True	NA	NA	False	AATAAA	-22	NA	75087953	75106162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_8279.known	chr1	+	2193	7	FSM	ENSG00000117411.18	ENST00000372324.6	2193	7	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	81.3478470656859	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	-16	True	NA	14	True	AGTAAA	-14	NA	43979209	43991168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43979512_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_82791.nnic	chr17	+	2093	7	NNC	ENSG00000170190.16	novel	1940	7	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	28.6749019178793	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	15	False	NA	NA	False	AATAAA	-22	NA	75087748	75106162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75104021_75104181_75105879
transcript_82797.known	chr17	+	2051	6	FSM	ENSG00000170190.16	ENST00000450736.6	2051	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	15.7098695093244	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACGTAGGAGG	973	False	NA	NA	False	AATAAA	-11	NA	75088937	75106151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_8280.known	chr1	+	2271	7	FSM	ENSG00000117411.18	ENST00000434555.7	2271	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	234.223539949909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGTACATTGCACAG	200	False	NA	-44	True	NA	NA	NA	43979178	43991110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43979617_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_82802.nic	chr17	+	3673	6	ISM	ENSG00000170190.16	ENST00000329783.9	1940	7	-34	0	-21	0	intron_retention	FALSE	canonical	3	48	junction_1	18.2493835512326	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	-3	True	NA	NA	False	AATAAA	-22	NA	75087919	75106162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
transcript_82806.known	chr17	+	1688	6	FSM	ENSG00000170190.16	ENST00000578376.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	32.784142508231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAACCAGCGTCTAAG	-5	True	NA	NA	False	NA	NA	NA	75087959	75104180	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75088045_75089113_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
transcript_82813.nic	chr17	+	4788	5	ISM	ENSG00000170190.16	ENST00000580123.5	2019	7	184	0	-30	0	intron_retention	FALSE	canonical	3	78	junction_1	7.96868872525461	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	-12	True	NA	NA	False	AATAAA	-22	NA	75087910	75106162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
transcript_8282.known	chr1	+	2629	7	FSM	ENSG00000117411.18	ENST00000356836.10	2629	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	243.846718703005	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	188	False	NA	14	True	AGTAAA	-14	NA	43979876	43991168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43980615_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_82827.nic	chr17	+	2513	3	ISM	ENSG00000170190.16	ENST00000450736.6	2051	6	-1172	7387	32	-1245	5prime_fragment	FALSE	canonical	3	78	junction_1	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGATGCAGGAGAGAGGG	0	True	NA	77	True	NA	NA	NA	75087765	75098764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_75089305_75093588_75093836_75098037
transcript_8283.known	chr1	+	2004	7	FSM	ENSG00000117411.18	ENST00000309519.8	2004	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.511920319617	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCTTGTCTGTTTGGG	0	True	NA	16	True	AGTAAA	-16	NA	43979935	43991170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43980047_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_82832.known	chr17	-	653	5	FSM	ENSG00000125458.7	ENST00000582170.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	228.111266709911	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCTGGAGCTAAAGG	15	True	NA	NA	False	NA	NA	NA	75131744	75130472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130638_75130752_75130868_75131044_75131106_75131180_75131282_75131533
transcript_82833.known	chr17	+	2151	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	8	True	NA	78	True	ATTAAA	-21	NA	75109968	75130272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75110380_75110462_75110607_75128676
transcript_82836.known	chr17	-	726	4	FSM	ENSG00000125458.7	ENST00000579023.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	217.256121253746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACAACTGGAGGGAGA	4227	False	NA	NA	False	NA	NA	NA	75131730	75130545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75130964_75131282_75131533
transcript_82837.known	chr17	-	648	4	FSM	ENSG00000125458.7	ENST00000578095.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	17.9071680247511	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAAGGAGACGGCTGCTC	2	True	NA	NA	False	NA	NA	NA	75131757	75130570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75131044_75131282_75131533
transcript_82839.known	chr17	-	503	4	FSM	ENSG00000125458.7	ENST00000579082.1	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	224.412318933005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTGCTCATTGATGACA	5	True	NA	NA	False	NA	NA	NA	75131714	75130787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130868_75130964_75131106_75131180_75131282_75131533
transcript_82845.nic	chr17	-	1342	2	NIC	ENSG00000125458.7	novel	720	4	NA	NA	-66	0	intron_retention	FALSE	canonical	3	570	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTCTAGGACCCTTTA	4134	False	NA	-7	True	AATAAA	-15	NA	75131823	75130229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75131282_75131533
transcript_82846.known	chr17	+	1204	3	FSM	ENSG00000125449.7	ENST00000582136.5	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	21	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCTCTTGTGTTTAT	17	True	NA	12	True	AATGAA	-27	NA	75109977	75114826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75110380_75110462_75110607_75114168
transcript_82847.known	chr17	-	860	4	FSM	ENSG00000125458.7	ENST00000582160.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	14.1970262926979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGACCCTTTATTTGG	4511	False	NA	-2	True	AATAAA	-20	NA	75131446	75130224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180
transcript_82848.known	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	215.146978185198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	4484	False	NA	-48	True	AATACA	-4	NA	75131473	75130270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
transcript_82849.known	chr17	-	1315	3	FSM	ENSG00000125458.7	ENST00000583655.5	1315	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	219.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	10	True	NA	-5	True	AATAAA	-17	NA	75131749	75130227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75130964
transcript_82850.known	chr17	-	1633	6	FSM	ENSG00000189159.16	ENST00000304834.11	1633	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	901.406678475371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTACTTCACAATCCT	NA	False	NA	-64	True	NA	NA	NA	75154675	75135306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75149090_75149186_75154341
transcript_82853.known	chr17	-	1434	5	FSM	ENSG00000189159.16	ENST00000409753.8	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_4	50.5123747214482	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTACTGTGTCTTCT	0	True	NA	-5	True	AGTAAA	-20	NA	75154512	75135247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75154341
transcript_82856.known	chr17	-	490	4	FSM	ENSG00000188612.12	ENST00000578238.2	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	1971.36314936307	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAAGATTACATTCTCA	-2	True	NA	NA	False	NA	NA	NA	75182563	75168297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182381
transcript_82857.known	chr17	-	3166	4	FSM	ENSG00000188612.12	ENST00000420826.7	3166	4	0	0	0	0	multi-exon	FALSE	canonical	3	3479	junction_3	432.653055769478	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTATTATGTGTTA	4	True	NA	-7	True	AATATA	-17	NA	75182959	75165585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182813
transcript_82874.known	chr17	+	2133	19	FSM	ENSG00000125450.11	ENST00000245544.9	2133	19	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	55.3016698785672	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTAGAGTCCACCCAG	-27	True	NA	36	True	AATAAA	-19	NA	75205678	75235758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_82889.known	chr17	+	1890	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	116.951029292585	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	14	True	NA	-31	True	NA	NA	NA	75205719	75235691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_82895.known	chr17	+	2010	18	FSM	ENSG00000125450.11	ENST00000579324.5	2010	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	119.331007174818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	1	True	NA	35	True	AATAAA	-18	NA	75205706	75235757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_8290.known	chr1	-	3119	14	FSM	ENSG00000196517.13	ENST00000673836.1	3119	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	20.5388936860327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTATTCCTGTCTCTGA	350	False	NA	-20	True	AATGAA	-1	NA	44031177	43996502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031087
transcript_82902.known	chr17	+	2233	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	118.266647876737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	14	True	NA	-12	True	NA	NA	NA	75205719	75235710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
transcript_8291.known	chr1	-	3206	14	FSM	ENSG00000196517.13	ENST00000372310.8	3206	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	11.0512523052726	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	13	True	NA	0	True	AATGAA	-21	NA	44031462	43996482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
transcript_82917.known	chr17	+	453	3	FSM	ENSG00000125450.11	ENST00000582833.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTTTTTTTTCTTCCA	1	True	NA	NA	False	AAAAAG	-1	NA	75205706	75208620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75208154_75208426_75208526
transcript_82919.known	chr17	-	4034	18	FSM	ENSG00000125447.18	ENST00000621870.4	4034	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_17	102.626173503104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	10	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75248839_75249009_75261547
transcript_82931.known	chr17	-	3871	17	FSM	ENSG00000125447.18	ENST00000537686.6	3871	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	45.7506403643709	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	4	True	NA	-5	True	AATAAA	-16	NA	75261606	75236598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_82943.known	chr17	-	3766	16	FSM	ENSG00000125447.18	ENST00000538886.5	3766	16	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	74.3001719752758	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	10	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75246508_75246585_75246711_75246797_75261547
transcript_82946.nic	chr17	-	4297	16	NIC	ENSG00000125447.18	novel	3871	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	247	junction_6	43.5704282997335	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-23	True	NA	-5	True	AATAAA	-16	NA	75261633	75236598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_8296.nnic	chr1	-	3219	13	NIC	ENSG00000196517.13	novel	3206	14	NA	NA	-165	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_11	19.478442499908	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	NA	False	NA	0	True	AATGAA	-21	NA	44031632	43996482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44024247_44024363_44031305
transcript_82991.known	chr17	-	1358	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	69.3821943216622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGCTTCCTTTATAT	-5	True	NA	NA	False	AATAAA	-14	NA	75271173	75266232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
transcript_82992.known	chr17	-	1419	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	62.8667020148363	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCTGATACTAAAAC	8	True	NA	NA	False	NA	NA	NA	75271227	75266246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
transcript_82993.nic	chr17	+	1203	6	NIC	ENSG00000125445.11	novel	731	5	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	3	87	junction_5	510.940466199341	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGGTGTGACTTGTGC	611	False	NA	14	True	TATAAA	-6	NA	75261640	75266363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701_75265967_75266192
transcript_82994.known	chr17	-	2058	6	FSM	ENSG00000125457.15	ENST00000579194.6	2058	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	68.044103344816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGTTCAGCGTGAGAA	236	False	NA	NA	False	NA	NA	NA	75270999	75266277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113
transcript_82995.known	chr17	-	855	6	FSM	ENSG00000125457.15	ENST00000580717.5	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	59.3936023490746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGACAACGCCAGCTG	102	False	NA	NA	False	NA	NA	NA	75271133	75266794	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75270942
transcript_82996.known	chr17	-	1319	6	FSM	ENSG00000125457.15	ENST00000325102.13	1319	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	34.1561121909388	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	4	True	NA	NA	False	AATAAA	-19	NA	75271231	75266227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75271143
transcript_82999.known	chr17	+	1204	5	FSM	ENSG00000125445.11	ENST00000245539.11	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_3	48.442620697068	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTCTGCCTCCACCC	-6	True	NA	27	True	TATAAA	-19	NA	75261878	75266376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701
transcript_83.known	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_+_1100_1600
transcript_83001.known	chr17	-	1345	5	FSM	ENSG00000125457.15	ENST00000618645.5	1345	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	18.6614576065215	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTACACCAGTTCAGCGT	2	True	NA	NA	False	NA	NA	NA	75270414	75266282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113
transcript_83004.known	chr17	-	952	5	FSM	ENSG00000125457.15	ENST00000580571.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	62.8664258567321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAGCCACTGGTGGG	8	True	NA	NA	False	NA	NA	NA	75271227	75266434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75268082_75268193_75270113_75270246_75271143
transcript_83008.known	chr17	-	569	4	FSM	ENSG00000125457.15	ENST00000578305.5	569	4	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	74.9414586342047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGGAGTCTCTGCCTC	35	False	NA	NA	False	NA	NA	NA	75271200	75266680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75270113_75270246_75271143
transcript_8301.nic	chr1	-	3484	13	NIC	ENSG00000196517.13	novel	3206	14	NA	NA	-165	-7	intron_retention	FALSE	canonical	3	48	junction_8	11.4996980636691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGAGCGGCTGCTGTGC	NA	False	NA	-7	True	AATGAA	-14	NA	44031632	43996489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
transcript_83010.known	chr17	-	319	2	FSM	ENSG00000125457.15	ENST00000580099.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCACCCTTCACCTTCC	1058	False	NA	NA	False	NA	NA	NA	75270177	75267937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75268193_75270113
transcript_83011.known	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_2	39.6063967897443	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	27	False	NA	17	True	NA	NA	NA	75261911	75266330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
transcript_83012.known	chr17	-	1400	6	FSM	ENSG00000125457.15	ENST00000581777.2	1400	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.334304850507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	480	False	NA	NA	False	AATAAA	-19	NA	75270755	75266227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75270586
transcript_83013.known	chr17	-	1531	7	FSM	ENSG00000125457.15	ENST00000577542.5	1531	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	71.3130812372846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTTCTAATAAATC	13	True	NA	NA	False	NA	NA	NA	75271155	75266263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75270942
transcript_83017.known	chr17	-	1554	8	FSM	ENSG00000125454.12	ENST00000580994.5	1554	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	37.3592597051158	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAACCTATTTAATAGAC	6	True	NA	-54	True	NA	NA	NA	75289411	75273029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_83018.known	chr17	-	1630	8	FSM	ENSG00000125454.12	ENST00000416858.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	55.8452672797885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-16	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288501_75288592_75289353
transcript_83020.nnic	chr17	-	1780	7	NIC	ENSG00000125454.12	novel	1630	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	52.7554631188931	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	9	True	NA	-16	True	ATTAAA	-13	NA	75289408	75272991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75289088
transcript_83021.known	chr17	-	1496	7	FSM	ENSG00000125454.12	ENST00000442286.6	1496	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	33.304987948087	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTATCTTACTCCATC	27	True	NA	-17	True	ATTAAA	-12	NA	75289390	75272992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75289353
transcript_83023.nic	chr17	-	1367	6	NIC	ENSG00000125454.12	novel	1630	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	53.794423502813	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-13	True	NA	-16	True	ATTAAA	-13	NA	75289430	75272991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75289353
transcript_83026.known	chr17	-	3273	6	FSM	ENSG00000177885.15	ENST00000316804.10	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_5	105.915815627318	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	5	True	NA	-6	True	AATAAA	-19	NA	75405678	75318075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550_75393766_75405488
transcript_8303.known	chr1	-	1881	12	FSM	ENSG00000196517.13	ENST00000475075.6	1881	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	22.0371587015287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGACGGCTGCTGTCA	-12	True	NA	NA	False	NA	NA	NA	44031386	43997442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44024247_44024363_44031305
transcript_83030.known	chr17	-	3181	5	FSM	ENSG00000177885.15	ENST00000316615.9	3181	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	408.12337289109	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-26	True	NA	-6	True	AATAAA	-19	NA	75405709	75318075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75320554_75321658_75321828_75332699_75332798_75393550_75393766_75405488
transcript_83036.known	chr17	-	3182	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	67.3772031179686	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-22	True	NA	-6	True	AATAAA	-19	NA	75393864	75318075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
transcript_83046.nic	chr17	+	5021	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	64	junction_14	36.6137132211098	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTGGTCTGTAAGG	-23	True	NA	NA	False	ATTAAA	-23	NA	75456615	75500090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491853_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_83047.nic	chr17	+	5383	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	64	junction_14	36.6137132211098	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCTCTGCTTAGA	-23	True	NA	9	True	AATAAA	-17	NA	75456615	75500452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491853_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_83050.known	chr17	+	5412	32	FSM	ENSG00000177728.17	ENST00000314256.12	5412	32	0	0	0	0	multi-exon	FALSE	canonical	2	108	junction_9	32.5251203646451	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCTCTGCTTAGA	-4	True	NA	9	True	AATAAA	-17	NA	75456634	75500452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_83054.nnic	chr17	+	5099	32	NNC	ENSG00000177728.17	novel	5432	31	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	45.3045883239766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTGGTCTGTAAGG	-23	True	NA	NA	False	ATTAAA	-23	NA	75456615	75500090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493133_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_83062.known	chr17	+	5432	31	FSM	ENSG00000177728.17	ENST00000581085.5	5432	31	0	0	0	0	multi-exon	FALSE	canonical	2	108	junction_9	32.9339574839641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTGGTCTGTAAGG	2	True	NA	NA	False	ATTAAA	-23	NA	75456640	75500090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_83096.known	chr17	+	3543	24	FSM	ENSG00000177728.17	ENST00000579208.5	3543	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.8099222583967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATCCCTTGCCCCCTTGG	11	True	NA	NA	False	NA	NA	NA	75456649	75499645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75456752_75471799_75471930_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_83108.known	chr17	-	4969	20	FSM	ENSG00000177303.10	ENST00000321617.8	4969	20	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	11.71688177629	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTGTGTTTGCCTC	-12	True	NA	0	True	AATGAA	-18	NA	75515537	75500260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75501171_75501467_75501691_75501778_75503255_75503388_75503528_75503658_75503761_75503851_75503963_75504214_75504307_75504419_75504481_75504571_75504694_75504811_75505074_75505556_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_83109.nnic	chr17	-	5022	20	NNC	ENSG00000177303.10	novel	4969	20	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_19	20.9133550883791	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTGTGTTTGCCTC	9935	False	NA	0	True	AATGAA	-18	NA	75515548	75500260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_75501171_75501467_75501691_75501778_75503255_75503388_75503528_75503658_75503761_75503851_75503963_75504214_75504307_75504419_75504481_75504571_75504694_75504811_75505074_75505556_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514251_75515400
transcript_83132.known	chr17	-	1612	10	FSM	ENSG00000177303.10	ENST00000581870.1	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	8.20568908339411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAGTGGAGCTGTGAT	10004	False	NA	NA	False	AATAAA	-43	NA	75515440	75505318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_83139.nic	chr17	+	1917	8	NIC	ENSG00000177728.17	novel	5432	31	NA	NA	-19	275	intron_retention	FALSE	canonical	3	154	junction_5	11.8183530742551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACCTCTTTCCCTTCCT	-23	True	NA	NA	False	NA	NA	NA	75456615	75490092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575
transcript_8315.known	chr1	+	1472	9	FSM	ENSG00000159214.13	ENST00000372318.8	1472	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	39.0398434295016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	0	True	NA	16	True	ATTAAA	-18	NA	43991598	43996528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43991747_43991846_43992005_43992211_43992388_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_83167.known	chr17	+	1921	11	FSM	ENSG00000182173.14	ENST00000679429.1	1921	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	128.962164994234	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCTGTATGTACTG	-12	True	NA	13	True	ATTAAA	-16	NA	75516535	75524735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75519002_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
transcript_83170.known	chr17	+	2093	11	FSM	ENSG00000182173.14	ENST00000680999.1	2093	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	132.381116478144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAGCCAAAGCCATTA	0	True	NA	-24	True	NA	NA	NA	75516547	75524698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522522_75523249_75523336_75523662_75523780_75524261
transcript_83171.known	chr17	+	2082	11	FSM	ENSG00000182173.14	ENST00000679782.1	2082	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	131.233989499672	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAGCCAAAGCCATTA	0	True	NA	-24	True	NA	NA	NA	75516547	75524698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522536_75523274_75523336_75523662_75523780_75524261
transcript_8318.known	chr1	+	1659	8	FSM	ENSG00000159214.13	ENST00000490563.5	1659	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	38.8655453100159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	67	False	NA	16	True	ATTAAA	-18	NA	43991665	43996528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43991747_43991846_43992388_43992522_43992640_43993839_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_83180.nnic	chr17	+	1950	11	NNC	ENSG00000182173.14	novel	1937	11	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	127.482116392849	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCTGTATGTACTG	NA	False	NA	13	True	ATTAAA	-16	NA	75516469	75524735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517601_75517656_75518994_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
transcript_83199.known	chr17	+	2555	10	FSM	ENSG00000182173.14	ENST00000680528.1	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_7	40.7867080745131	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCAGAGGATGGAGCTT	-12	True	NA	NA	False	NA	NA	NA	75516535	75524420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75523336_75523662_75523780_75524261
transcript_8320.nic	chr1	+	1625	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	13	junction_1	34.9115500448005	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	3	True	NA	16	True	ATTAAA	-18	NA	43991601	43996528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992005_43992152_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_8321.nic	chr1	+	1412	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	16	junction_1	34.2761891530716	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	157	False	NA	16	True	ATTAAA	-18	NA	43991755	43996528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_83215.known	chr17	+	3036	9	FSM	ENSG00000182173.14	ENST00000580013.6	3036	9	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	35.4815092689136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	4	True	NA	1	True	ATTAAA	-4	NA	75516551	75524723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75523336_75523662_75523780_75524261
transcript_83217.known	chr17	+	2632	9	FSM	ENSG00000182173.14	ENST00000579449.2	2632	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	145.778727872073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	49	False	NA	1	True	ATTAAA	-4	NA	75516596	75524723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75523336_75523662_75523780_75524261
transcript_83224.known	chr17	+	870	8	FSM	ENSG00000182173.14	ENST00000583818.2	870	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	153.044077951152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGGGGTGCAGCTG	13	True	NA	NA	False	NA	NA	NA	75516560	75521897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521354_75521511_75521704
transcript_83239.nnic	chr17	-	2694	3	Antisense	novelGene_ENSG00000073350.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	8.5	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTCTTTCGTTTATGT	NA	False	NA	-4	True	AATAAA	-23	NA	75525532	75521142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr17_-_75522499_75523252_75523369_75524310
transcript_83245.known	chr17	+	2895	10	FSM	ENSG00000182173.14	ENST00000681282.1	2895	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	139.596243184088	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	-20	True	NA	1	True	ATTAAA	-4	NA	75516527	75524723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521675_75523336_75523662_75523780_75524261
transcript_83252.known	chr17	+	3553	26	FSM	ENSG00000073350.14	ENST00000392550.8	3553	26	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_25	77.5882877759266	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCCACTACTTTAATAT	-20	True	NA	16	True	AATAAA	-18	NA	75525696	75575209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574870
transcript_83253.nic	chr17	+	3588	26	NIC	ENSG00000073350.14	novel	3553	26	NA	NA	-40	0	combination_of_known_junctions	TRUE	canonical	3	223	junction_25	85.0745555380691	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	8655	False	NA	14	True	AATAAA	-16	NA	75525656	75575207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574873
transcript_83260.known	chr17	+	3480	25	FSM	ENSG00000073350.14	ENST00000167462.9	3480	25	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_23	94.2878184514486	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTCCACTACTTTAATA	9	True	NA	15	True	AATAAA	-17	NA	75525725	75575208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574870
transcript_83261.nic	chr17	+	3545	25	NIC	ENSG00000073350.14	novel	3480	25	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	153	junction_23	100.701980560905	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	8655	False	NA	14	True	AATAAA	-16	NA	75525656	75575207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574873
transcript_83286.known	chr17	+	1374	10	FSM	ENSG00000073350.14	ENST00000375227.8	1374	10	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_7	42.5670132530337	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCACGTACCTG	15	True	NA	9	True	AATAAA	-12	NA	75525731	75564721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
transcript_8329.nic	chr1	+	1600	7	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	29.7414787049258	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-30	True	NA	16	True	ATTAAA	-18	NA	43991774	43996528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_83308.known	chr17	-	3669	20	FSM	ENSG00000108469.15	ENST00000317905.10	3669	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	24.3662042870313	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-6	True	NA	-16	True	AATAAA	-36	NA	75667154	75626853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_83309.nic	chr17	-	3775	20	NIC	ENSG00000108469.15	novel	3669	20	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	28.9615276375832	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-14	True	NA	-16	True	AATAAA	-36	NA	75667197	75626853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628826_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_83312.nic	chr17	-	4184	19	ISM	ENSG00000108469.15	ENST00000317905.10	3669	20	-43	0	-8	0	intron_retention	FALSE	canonical	3	64	junction_5	13.4618803375391	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-14	True	NA	-16	True	AATAAA	-36	NA	75667197	75626853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427
transcript_83314.nic	chr17	-	3944	19	NIC	ENSG00000108469.15	novel	3669	20	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_18	24.3976825452797	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-14	True	NA	-16	True	AATAAA	-36	NA	75667197	75626853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_83322.nic	chr17	-	4416	18	NIC	ENSG00000108469.15	novel	3669	20	NA	NA	-8	0	intron_retention	FALSE	canonical	3	77	junction_9	11.9604307244424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-14	True	NA	-16	True	AATAAA	-36	NA	75667197	75626853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427
transcript_8333.nnic	chr1	+	1295	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	6	junction_2	39.8162445910376	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	157	False	NA	16	True	ATTAAA	-18	NA	43991755	43996528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992005_43992211_43992388_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_83338.known	chr17	-	3710	8	FSM	ENSG00000108469.15	ENST00000420326.6	3710	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	35.4239628338946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	-6	True	NA	NA	False	ACTAAA	-6	NA	75667189	75648864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_8334.nnic	chr1	+	1300	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	40.4423457941467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-27	True	NA	16	True	ATTAAA	-18	NA	43991777	43996528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992005_43992522_43992640_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_83350.known	chr17	+	709	3	FSM	ENSG00000266714.10	ENST00000583140.5	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTTGCTCCTTTGG	4051	False	NA	15	True	AATAAA	-21	NA	75619878	75620921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75620021_75620245_75620358_75620466
transcript_83358.known	chr17	+	1000	12	FSM	ENSG00000161526.15	ENST00000583536.5	1000	12	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_3	275.052001093948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACCGTGCAGCCCAGT	28	False	NA	NA	False	NA	NA	NA	75667425	75706545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75690670_75690773_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_83365.nnic	chr17	+	2386	12	NNC	ENSG00000161526.15	novel	1000	12	NA	NA	-10	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	228.458976913212	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGACTTATGCAAAAGC	-22	True	NA	16	True	AATAAA	-28	NA	75667327	75708014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339_75707129_75707207
transcript_83369.known	chr17	+	1558	11	FSM	ENSG00000161526.15	ENST00000580322.5	1558	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	234.403583590354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGGCATCTCAGATG	24	True	NA	22	True	ATTAAA	-15	NA	75667373	75706756	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75705610_75706093_75706339
transcript_83371.known	chr17	+	2500	11	FSM	ENSG00000161526.15	ENST00000584667.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_5	41.8168626274138	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTTGTTGGCTAAAT	-12	True	NA	21	True	TATAAA	-18	NA	75667337	75708059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_83381.known	chr17	+	2409	10	FSM	ENSG00000161526.15	ENST00000582022.5	2409	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	234.109713648732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTTGGCTAAATCCA	21	True	NA	24	True	TATAAA	-21	NA	75667370	75708062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_83384.known	chr17	+	2439	10	FSM	ENSG00000161526.15	ENST00000355423.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	204.285626718941	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTTTTTTGTTGGC	-4	True	NA	16	True	TATAAA	-13	NA	75667345	75708054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_83390.known	chr17	+	1011	9	FSM	ENSG00000161526.15	ENST00000542343.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_6	252.365774967605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTGTCCACGCACCACC	6	True	NA	-33	True	NA	NA	NA	75667355	75706701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75704755_75704815_75706007_75706093_75706339
transcript_83399.known	chr17	+	1097	6	FSM	ENSG00000161526.15	ENST00000577292.5	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_5	53.353162980277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGGAGGGCCATCAGG	1	True	NA	NA	False	NA	NA	NA	75667350	75703158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479
transcript_8340.known	chr1	+	860	6	FSM	ENSG00000159214.13	ENST00000486504.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.1418405428999	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGGCTGTTGGTCTGTCT	-21	True	NA	NA	False	NA	NA	NA	43991783	43996279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43992020_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_83401.known	chr17	+	5554	39	FSM	ENSG00000132470.14	ENST00000579662.5	5554	39	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_31	6.79762872130326	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCCGGAGCCTCCTCA	-8	True	NA	NA	False	NA	NA	NA	75721327	75757604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75721564_75724693_75724783_75727194_75727278_75727403_75727506_75727650_75727856_75728376_75728474_75729264_75729437_75730240_75730505_75730874_75730965_75731245_75731369_75731811_75731974_75732162_75732240_75733489_75733693_75736050_75736155_75736287_75736387_75736564_75736695_75737321_75737445_75737537_75737645_75739671_75739706_75739879_75740072_75740357_75740462_75740792_75740852_75740981_75741006_75742340_75742490_75742581_75742762_75743712_75743862_75748840_75749046_75750110_75750269_75750679_75750861_75750973_75751112_75752173_75752357_75752445_75752578_75754575_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
transcript_83402.known	chr17	+	5645	39	FSM	ENSG00000132470.14	ENST00000450894.7	5645	39	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_31	6.77216275392514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCCCTGCCTTGCCCAT	-4	True	NA	9	True	AATAAA	-15	NA	75721496	75757815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75721613_75724693_75724783_75727194_75727278_75727403_75727506_75727650_75727856_75728376_75728474_75729264_75729437_75730240_75730505_75730874_75730965_75731245_75731369_75731811_75731974_75732162_75732240_75733489_75733693_75736050_75736155_75736287_75736387_75736564_75736695_75737321_75737445_75737537_75737645_75739671_75739706_75739879_75740072_75740357_75740462_75740792_75740852_75740981_75741006_75742340_75742490_75742581_75742762_75743712_75743862_75748840_75749046_75750110_75750269_75750679_75750861_75750973_75751112_75752173_75752357_75752445_75752578_75754575_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
transcript_83405.known	chr17	-	1445	9	FSM	ENSG00000108479.13	ENST00000225614.6	1445	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	95.0867202873251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTAGTAGAAACGGTT	2535	False	NA	NA	False	NA	NA	NA	75765236	75751593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75751738_75758033_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_83406.known	chr17	+	5896	40	FSM	ENSG00000132470.14	ENST00000200181.8	5896	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	6.91167151677643	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGCCTTGCCCATTCT	-2	True	NA	12	True	AATAAA	-18	NA	75721458	75757818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75721613_75724693_75724783_75727194_75727278_75727403_75727506_75727650_75727856_75728376_75728474_75729264_75729437_75730240_75730505_75730874_75730965_75731245_75731369_75731811_75731974_75732162_75732240_75733489_75733693_75736050_75736155_75736287_75736387_75736564_75736695_75737321_75737445_75737537_75737645_75739671_75739706_75739879_75740072_75740357_75740462_75740792_75740852_75740981_75741006_75742340_75742490_75742581_75742762_75743712_75743862_75748840_75749046_75750110_75750269_75750679_75750861_75750973_75751112_75752173_75752357_75752445_75752578_75753764_75753975_75754575_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
transcript_83410.known	chr17	-	1251	8	FSM	ENSG00000108479.13	ENST00000592997.6	1251	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	97.9714660667345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	2635	False	NA	31	True	NA	NA	NA	75765136	75757893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762796_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_83411.known	chr17	-	1397	8	FSM	ENSG00000108479.13	ENST00000588479.6	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	16.1637033541961	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	-19	True	NA	31	True	NA	NA	NA	75765192	75757893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_83422.known	chr17	+	1312	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	7.76029781788188	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	14	True	NA	27	True	ATTAAA	-27	NA	75784854	75794198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
transcript_83427.known	chr17	-	468	4	FSM	ENSG00000132475.10	ENST00000586270.5	468	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7354.01905234289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAGAGCTTAAGTGAA	5940	False	NA	-124	True	NA	NA	NA	75779603	75778609	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779541
transcript_83428.known	chr17	-	576	4	FSM	ENSG00000132475.10	ENST00000589599.5	576	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	7353.07640832507	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	-3	True	NA	-88	True	NA	NA	NA	75779780	75778573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779646
transcript_83432.known	chr17	-	586	3	FSM	ENSG00000132475.10	ENST00000587171.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	13122	junction_2	1153.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCCAGTTGGCTCGCC	-1	True	NA	-152	True	NA	NA	NA	75779778	75778637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778964_75779046_75779185_75779656
transcript_83433.known	chr17	-	575	3	FSM	ENSG00000132475.10	ENST00000589417.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	13122	junction_2	1322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCCAAAGACATCCAGT	-2	True	NA	-161	True	NA	NA	NA	75779779	75778646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778724_75778809_75779185_75779656
transcript_83437.known	chr17	-	1701	1	FSM	ENSG00000132475.10	ENST00000586518.1	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATATTGTAGTATCA	5	True	NA	-61	True	AGTAAA	-43	NA	75779772	75778071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778100_75779800
transcript_83438.known	chr17	-	2787	1	FSM	ENSG00000132475.10	ENST00000591893.1	2787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTGTGTTGCTTTTCC	NA	False	NA	NA	False	TATAAA	-19	NA	75785893	75783106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75783100_75785900
transcript_83442.nic	chr17	-	1789	9	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-66	0	intron_retention	FALSE	canonical	3	20	junction_8	11.9687092035858	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTGGCCTACAGTG	9572	False	NA	-16	True	AATAAA	-25	NA	75833335	75827224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75828087_75828786_75828984_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_83446.nnic	chr17	-	1574	8	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-66	-18	intron_retention	FALSE	canonical	3	6	junction_1	18.4689480159625	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTGTCCTCTTAAAATA	9572	False	NA	-34	True	AATAAA	-7	NA	75833335	75827242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75828087_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_83451.known	chr17	-	1745	8	FSM	ENSG00000132471.12	ENST00000590221.5	1745	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	194.001051964326	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAATAAACCCTGTTT	16	True	NA	-40	True	AATATA	-4	NA	75855306	75845771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847598_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_83455.nic	chr17	-	1711	7	NIC	ENSG00000132471.12	novel	2225	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	12	junction_6	186.713461396512	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTGCTGAAAATGTG	-19	True	NA	-12	True	AATAAA	-17	NA	75855341	75845743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75855238
transcript_83457.known	chr17	-	928	7	FSM	ENSG00000132471.12	ENST00000433525.6	928	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	203.536032845948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCTTCTGGGAGCACG	-13	True	NA	NA	False	NA	NA	NA	75855335	75846494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_83466.known	chr17	-	1895	8	FSM	ENSG00000132471.12	ENST00000585462.5	1895	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	182.863504353629	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGGACCCTTTCTGG	0	True	NA	-16	True	AGTAAA	-6	NA	75855322	75845708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855179
transcript_83468.known	chr17	-	1907	6	FSM	ENSG00000132481.7	ENST00000587339.2	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	12.7027556065603	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	416	False	NA	NA	False	AATAAA	-16	NA	75878196	75874163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877850
transcript_83469.known	chr17	-	2269	6	FSM	ENSG00000132481.7	ENST00000254816.6	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.83321838943783	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	2	True	NA	NA	False	AATAAA	-16	NA	75878581	75874163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877873
transcript_83477.nnic	chr17	-	2781	7	NNC	ENSG00000141569.12	novel	3384	6	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.3781386081136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACGTGTAATATACATA	-33	True	NA	-3	True	AATAAA	-15	NA	75897013	75888962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_75889187_75889851_75891348_75891812_75891879_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_83481.known	chr17	-	3384	6	FSM	ENSG00000141569.12	ENST00000269383.8	3384	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	9.93176721434811	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACGTGTAATATACATA	29	True	NA	-3	True	AATAAA	-15	NA	75896951	75888962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75891348_75891812_75891879_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_83485.known	chr17	-	865	5	FSM	ENSG00000141569.12	ENST00000543309.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	83.2871538714104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAAGCCCAGCGCCTCC	8538	False	NA	NA	False	GGGGCT	-37	NA	75896558	75891022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75891348_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_83491.known	chr17	-	3626	30	FSM	ENSG00000188878.20	ENST00000636174.2	4874	30	99	1149	4	-879	multi-exon	FALSE	canonical	3	12	junction_5	11.3615326125303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGACCCCAGCCGATTCC	2272	False	NA	NA	False	AAGAAA	-34	NA	75940943	75910722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75910807_75912191_75912308_75913701_75913820_75913912_75914051_75914121_75914299_75914746_75914933_75915016_75915140_75917731_75917851_75917930_75918071_75918161_75918270_75919667_75919875_75920006_75920108_75920273_75920430_75921243_75921303_75921471_75921561_75921944_75922047_75923185_75923642_75925346_75925447_75926029_75926164_75926287_75926427_75926757_75926878_75927454_75927533_75928075_75928194_75929996_75930048_75931228_75931290_75932994_75933089_75935631_75935674_75937565_75937594_75938146_75938233_75940847
transcript_83495.known	chr17	-	4825	29	FSM	ENSG00000188878.20	ENST00000586717.5	4825	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	12.4668949377042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGCTGCGCCTGGAT	19	True	NA	NA	False	ATTAAA	-20	NA	75941038	75909573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75910807_75912191_75912308_75913701_75913820_75913912_75914051_75914121_75914296_75914746_75914933_75915016_75915140_75917731_75917851_75917930_75918071_75918161_75918270_75919667_75919875_75920006_75920108_75920273_75920430_75921243_75921303_75921471_75921561_75921944_75922047_75923185_75923642_75925346_75925447_75926029_75926164_75926287_75926427_75926757_75926878_75927454_75927533_75928075_75928194_75929996_75930048_75931228_75931290_75932994_75933089_75937565_75937594_75938146_75938233_75940847
transcript_83520.known	chr17	-	1358	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_1	26.0612259880459	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	13	True	NA	-11	True	AATAAA	-18	NA	75904884	75898643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
transcript_83530.nic	chr17	-	2009	8	NIC	ENSG00000204316.13	novel	1358	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1042	junction_1	24.7312080792917	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	-1	True	NA	-11	True	AATAAA	-18	NA	75905097	75898643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901921_75902019_75902155_75904539_75904720_75904808
transcript_8354.known	chr1	+	482	2	FSM	ENSG00000230615.8	ENST00000623351.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAATCCCAGCTACTC	12	True	NA	NA	False	AATACA	-26	NA	44030442	44040273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44030558_44039906
transcript_8356.nic	chr1	+	1683	12	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	119.697345607388	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	NA	False	NA	18	True	AATAGA	-15	NA	44213426	44220673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44213528_44213708_44213859_44214349_44214442_44214538_44214617_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_83561.known	chr17	-	7317	14	FSM	ENSG00000161533.12	ENST00000293217.10	7317	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	20.1896335225568	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTAATCTTTTTGTG	-14	True	NA	0	True	AATAAA	-39	NA	75979166	75941506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75960214_75960376_75978533_75978694_75978964
transcript_83562.known	chr17	-	2215	14	FSM	ENSG00000161533.12	ENST00000301608.8	2215	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	18.7446244759814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAAGTGCAATTAACA	18	True	NA	-23	True	ATTAAA	-15	NA	75979134	75946576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75973624_75973786_75978533_75978694_75978964
transcript_83573.known	chr17	+	2259	11	FSM	ENSG00000261408.7	ENST00000649294.1	2259	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	87.7474216145409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTTCCTGAGTTTTCT	7	True	NA	5	True	AATAAA	-8	NA	75979251	76005985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000390_76001411_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_83574.nnic	chr17	+	2389	11	NNC	ENSG00000261408.7	novel	2259	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	85.4171528441448	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	-10	True	NA	18	True	AATAAA	-21	NA	75979234	76005998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000490_76001411_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_83579.nnic	chr17	+	2734	10	NNC	ENSG00000261408.7	novel	2259	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	18	junction_4	85.1957803394882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	-23	True	NA	18	True	AATAAA	-21	NA	75979221	76005998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000490_76001411_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_83582.known	chr17	+	3287	10	FSM	ENSG00000261408.7	ENST00000569284.1	3287	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	79.7585863638858	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTGTTCTGCTCA	15	True	NA	19	True	AATAAA	-22	NA	75979259	76005999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_83591.known	chr17	+	3897	9	FSM	ENSG00000261408.7	ENST00000567351.5	3897	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	82.4832369333309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	-14	True	NA	18	True	AATAAA	-21	NA	75979230	76005998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76003399_76005297
transcript_83592.nic	chr17	+	3658	9	NIC	ENSG00000261408.7	novel	3287	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	88	junction_4	76.5350205788174	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	-25	True	NA	18	True	AATAAA	-21	NA	75979219	76005998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_83608.known	chr17	+	974	4	FSM	ENSG00000257949.7	ENST00000397640.6	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	2.35702260395516	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCGTGGTGCAGCGC	-5	True	NA	13	True	AATAAA	-24	NA	75979239	76000586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140
transcript_83610.known	chr17	-	2124	20	FSM	ENSG00000182473.22	ENST00000634349.1	2124	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	243.491113672908	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	7	True	NA	-109	True	NA	NA	NA	76103692	76083647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_83615.known	chr17	-	2031	19	FSM	ENSG00000182473.22	ENST00000411744.6	2031	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	216.040519747661	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	7	True	NA	-109	True	NA	NA	NA	76103692	76083647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_83617.known	chr17	-	4782	19	FSM	ENSG00000182473.22	ENST00000589210.6	4782	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	205.853845131821	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGGGAGAAGTGGTC	-33	True	NA	-35	True	AATAAA	-20	NA	76103787	76081015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_8363.known	chr1	+	1552	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.861119962793	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	-15	True	NA	26	True	AATAGA	-23	NA	44213487	44220681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_83630.known	chr17	-	4596	18	FSM	ENSG00000182473.22	ENST00000332065.9	4596	18	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_12	59.1032174371132	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAGGGAGAAGTGGT	4	True	NA	-36	True	AATAAA	-19	NA	76103695	76081016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_83658.known	chr17	-	2831	16	FSM	ENSG00000167881.15	ENST00000307877.7	2831	16	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_5	90.8234918215913	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACACTTAACGATTCCC	-11	True	NA	-6	True	AATAAA	-18	NA	76072517	76038784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76070377_76070445_76072307
transcript_83668.known	chr17	-	1941	15	FSM	ENSG00000167881.15	ENST00000592704.5	1941	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	228.349579838118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCTTAAGCAGCGTGTC	9	True	NA	2	True	NA	NA	NA	76072497	76039550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76072344
transcript_83669.known	chr17	-	2386	15	FSM	ENSG00000167881.15	ENST00000539137.5	2386	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	224.546902059436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTGCCCATTTCTTAT	-1	True	NA	-3	True	ATTAAA	-16	NA	76072507	76039105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76070377_76070445_76072307
transcript_8367.nic	chr1	+	1631	11	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.131969100652	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	-14	True	NA	18	True	AATAGA	-15	NA	44213446	44220673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44213528_44213662_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_83681.known	chr17	-	2958	6	FSM	ENSG00000182473.22	ENST00000405068.3	2958	6	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_2	67.5857973245859	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11	True	NA	NA	False	NA	NA	NA	76103743	76092314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_8369.known	chr1	+	1545	11	FSM	ENSG00000178028.14	ENST00000361745.10	1545	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	118.635618597452	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	-6	True	NA	26	True	AATAGA	-23	NA	44213454	44220681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44213528_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_83693.known	chr17	-	718	4	FSM	ENSG00000182473.22	ENST00000406660.4	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_2	21.3541565040626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTTGTTGTTGTTG	20	True	NA	NA	False	ATTAAA	-37	NA	76103734	76101011	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76101377_76101678_76101864_76103360_76103427_76103632
transcript_83695.known	chr17	+	1373	2	FSM	ENSG00000182687.4	ENST00000329003.4	1373	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGCGCTGTTTCGCGT	1	True	NA	13	True	AATAAA	-24	NA	76074780	76077537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76075252_76076635
transcript_83696.known	chr17	-	2587	3	FSM	ENSG00000129654.8	ENST00000322957.7	2587	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	25	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACCTGCTCAAAACTT	3	True	NA	-5	True	AATAAA	-18	NA	76141245	76136332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76138121_76139897_76140565_76141113
transcript_83697.known	chr17	+	660	2	FSM	ENSG00000185262.9	ENST00000589240.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGAGGGCAGGGGGTTT	357	False	NA	-90	True	NA	NA	NA	76265702	76270586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76265970_76270193
transcript_83699.known	chr17	-	5677	19	FSM	ENSG00000129646.16	ENST00000636395.1	5677	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	8.21621402103829	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGGTGTGGCGAATCGT	278	False	NA	-4	True	AATAAA	-14	NA	76307998	76274048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76274244_76275818_76275948_76276679_76276768_76277162_76277311_76277988_76278190_76279040_76279143_76279362_76279429_76280032_76280155_76280286_76280452_76280653_76280729_76280830_76280954_76281863_76282116_76287191_76287307_76287799_76287898_76289991_76290078_76291014_76294022_76304414_76304526_76304881_76304942_76307464
transcript_83703.known	chr17	-	3435	10	FSM	ENSG00000161542.17	ENST00000446526.8	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	20.932578424699	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTCTCAATTGTTAAC	-23	True	NA	NA	False	NA	NA	NA	76353916	76309477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_83712.nic	chr17	-	1295	9	ISM	ENSG00000161542.17	ENST00000446526.8	3435	10	-6	3315	-6	0	5prime_fragment	FALSE	canonical	3	466	junction_5	17.0953209972788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTTAATCTGTCTAT	-29	True	NA	NA	False	AATAAA	-18	NA	76353922	76312792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_8372.nic	chr1	+	1672	11	NIC	ENSG00000178028.14	novel	1545	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.510621938483	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	-6	True	NA	18	True	AATAGA	-15	NA	44213454	44220673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44213663_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_83723.known	chr17	+	1816	6	FSM	ENSG00000176170.14	ENST00000592299.6	1816	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTCGTCCTGTCCTGG	-19	True	NA	2	True	AATAAA	-13	NA	76384608	76387855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76384807_76385450_76385655_76385984_76386138_76386220_76386316_76386392_76386509_76386805
transcript_83724.known	chr17	+	2138	6	FSM	ENSG00000176170.14	ENST00000323374.8	2138	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.20966987850401	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTCGTCCTGTCCTGG	22	True	NA	2	True	AATAAA	-13	NA	76384649	76387855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76385170_76385450_76385655_76385984_76386138_76386220_76386316_76386392_76386509_76386805
transcript_83725.known	chr17	+	2502	5	FSM	ENSG00000176170.14	ENST00000591762.1	2502	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.36545993132812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCGTCCTGTCCTGGT	410	False	NA	3	True	AATAAA	-14	NA	76382976	76387856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76383530_76385450_76386138_76386220_76386316_76386392_76386509_76386805
transcript_83727.nic	chr17	+	2134	5	NIC	ENSG00000176170.14	novel	1851	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_4	1.4790199457749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTCGTCCTGTCCTGG	-7	True	NA	2	True	AATAAA	-13	NA	76384620	76387855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_76384807_76385450_76386138_76386220_76386316_76386392_76386509_76386805
transcript_83729.known	chr17	-	572	5	FSM	ENSG00000161542.17	ENST00000494662.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	22.5319217999708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCGTTACTGGAAGGCA	8	True	NA	NA	False	NA	NA	NA	76353628	76330482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_8373.nnic	chr1	+	1589	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.169321923445	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	4	True	NA	18	True	AATAGA	-15	NA	44213464	44220673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_44213550_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_83731.known	chr17	+	1779	5	FSM	ENSG00000176170.14	ENST00000392496.3	1779	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCGTCCTGTCCTGGTG	8	True	NA	4	True	AATAAA	-15	NA	76385291	76387857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76385655_76385984_76386138_76386220_76386316_76386392_76386509_76386805
transcript_83734.known	chr17	-	5377	18	FSM	ENSG00000175931.13	ENST00000319380.12	5377	18	0	0	0	0	multi-exon	TRUE	canonical	1	92	junction_3	34.5337706438045	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCCGTTGCCTTTG	2	True	NA	71	True	ATTAAA	-18	NA	76453152	76389455	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76391614_76391755_76391814_76391909_76392114_76395724_76395862_76396127_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_83747.nic	chr17	-	3409	15	ISM	ENSG00000175931.13	ENST00000319380.12	5377	18	-75	5892	-75	10	5prime_fragment	FALSE	canonical	3	153	junction_10	24.5432770627639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCGCCACCATGCGGG	9998	False	NA	NA	False	ACTAAA	-24	NA	76453227	76395347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_76395862_76396127_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_83751.known	chr17	-	3579	14	FSM	ENSG00000175931.13	ENST00000586409.5	3579	14	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	23.7857796510745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAAAAACTCTCCCGCC	9967	False	NA	NA	False	ACTAAA	-14	NA	76453141	76395357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_83756.nic	chr17	-	1664	9	ISM	ENSG00000175931.13	ENST00000586409.5	3579	14	-86	4141	-75	290	5prime_fragment	FALSE	canonical	3	153	junction_4	20.1304340489717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAAGAGGAAGAAGAATAA	9998	False	NA	-8	True	AAAAAG	-37	NA	76453227	76399498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_83758.known	chr17	+	971	4	FSM	ENSG00000129673.10	ENST00000392492.8	971	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGTGGTGTGTCTTGT	-6	True	NA	NA	False	AATAAA	-31	NA	76467602	76470117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76467728_76468671_76468910_76469172_76469328_76469664
transcript_83759.nnic	chr17	-	4029	20	NIC	ENSG00000129667.13	novel	3511	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_19	25.069543164163	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-31	True	NA	-16	True	ATTAAA	-18	NA	76501423	76470895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487852_76487973_76488133_76500935
transcript_83760.nic	chr17	-	3623	20	NIC	ENSG00000129667.13	novel	3511	19	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_19	24.4117495891945	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-42	False	NA	-16	True	ATTAAA	-18	NA	76501434	76470895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487852_76487973_76488133_76501352
transcript_83766.nic	chr17	-	3939	19	NIC	ENSG00000129667.13	novel	3511	19	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_18	20.869967789998	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-42	False	NA	-16	True	ATTAAA	-18	NA	76501434	76470895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487910_76500935
transcript_83767.known	chr17	-	3511	19	FSM	ENSG00000129667.13	ENST00000675367.1	3511	19	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_12	15.8819915099142	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-31	True	NA	-16	True	ATTAAA	-18	NA	76501423	76470895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487910_76501352
transcript_8377.known	chr1	+	1742	10	FSM	ENSG00000178028.14	ENST00000372289.7	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.3829755422309	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	10	True	NA	18	True	AATAGA	-15	NA	44213470	44220673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_83771.known	chr17	-	3582	19	FSM	ENSG00000129667.13	ENST00000313080.8	3582	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_16	23.0150916670876	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-15	True	NA	-16	True	ATTAAA	-18	NA	76501407	76470895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479942_76481374_76481546_76487711_76487910_76501352
transcript_83782.nic	chr17	+	1070	3	NIC	ENSG00000214140.11	novel	673	4	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACCTCAATATTCTAA	150	False	NA	17	True	AATAAA	-27	NA	76537972	76553574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_76538508_76540504_76540574_76553108
transcript_83788.known	chr17	-	1904	9	FSM	ENSG00000070731.11	ENST00000225276.10	1904	9	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_5	6.32331993497087	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGCGTCAGTAAATTTG	-18	True	NA	-2	True	AATAAA	-15	NA	76585860	76565376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76566272_76567452_76567553_76568712_76568797_76570564_76570669_76572636_76572776_76573194_76573364_76574364_76574540_76578755_76578817_76585683
transcript_83793.known	chr17	+	3059	6	FSM	ENSG00000163597.16	ENST00000667091.1	3059	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	744.260868244462	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	-5	True	NA	11	True	AATAAA	-9	NA	76557765	76565338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76557969_76558280_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_83796.known	chr17	+	989	5	FSM	ENSG00000163597.16	ENST00000586942.7	993	5	3	1	0	-1	multi-exon	FALSE	canonical	3	50	junction_1	762.380810356609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTGTCTCCGCAGA	-2	True	NA	13	True	GATAAA	-4	NA	76557768	76563581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_83798.known	chr17	+	2620	4	FSM	ENSG00000163597.16	ENST00000587838.2	2620	4	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_2	899.005499921379	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	1	True	NA	11	True	AATAAA	-9	NA	76557795	76565338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76558373_76558601_76561287_76561399_76563118
transcript_83799.known	chr17	+	1830	4	FSM	ENSG00000163597.16	ENST00000653677.2	2536	4	0	706	0	-637	multi-exon	FALSE	canonical	3	39	junction_3	339.72930400541	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAACTGTAAGTCCAAT	-5	True	NA	-18	True	NA	NA	NA	76557765	76564642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76558944_76559044_76561287_76561403_76563118
transcript_83802.known	chr17	+	2407	3	FSM	ENSG00000163597.16	ENST00000493536.7	2437	3	3	27	0	-17	multi-exon	FALSE	canonical	3	39	junction_2	603	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	-2	True	NA	-6	True	NA	NA	NA	76557768	76565321	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76561287_76561403_76563118
transcript_83805.known	chr17	-	1833	4	FSM	ENSG00000182534.14	ENST00000449428.7	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	54.1869192907497	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTTTTTCAGTTTG	28	True	NA	-1	True	AATAAA	-24	NA	76710965	76679565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76680880_76685071_76685166_76688112_76688177_76710604
transcript_83806.known	chr17	+	1717	1	FSM	ENSG00000261335.1	ENST00000565271.1	1717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTAGTATAATTAC	NA	False	NA	NA	False	AATAAA	-16	NA	76671941	76673658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76671900_76673700
transcript_83807.known	chr17	-	1893	7	FSM	ENSG00000070495.15	ENST00000303996.10	1893	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	59.7717882170733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-5	True	NA	-23	True	AATAAA	-24	NA	76726784	76718445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76718861_76720359_76720499_76721262_76721352_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_83808.known	chr17	-	1898	7	FSM	ENSG00000070495.15	ENST00000542934.5	1898	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	59.7717882170733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-5	True	NA	-23	True	AATAAA	-24	NA	76726784	76718445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76718861_76720359_76720499_76721262_76721357_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_83809.known	chr17	-	1621	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	12.7216351150314	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAAATGTTTTCCTTT	7	True	NA	-28	True	AATAAA	-19	NA	76726606	76718450	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_83814.known	chr17	+	2850	14	FSM	ENSG00000092931.12	ENST00000621483.4	2850	14	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	20.5463827997496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7	True	NA	NA	False	NA	NA	NA	76736564	76779254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76737092_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_83820.known	chr17	+	2538	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	22.5645687597527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGATAATTTTTTAAAA	18	True	NA	NA	False	AAAAAG	-12	NA	76737700	76779286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_83822.known	chr17	+	1891	14	FSM	ENSG00000092931.12	ENST00000590514.5	1891	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.8378975201599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	48	True	NA	19	True	TATAAA	-16	NA	76738070	76778727	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_83832.known	chr17	+	1171	5	FSM	ENSG00000181038.14	ENST00000615984.4	1171	5	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_1	65.807959245064	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGATTGTTCCTTAGTC	752	False	NA	NA	False	ATTAAA	-16	NA	76726829	76733879	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_83834.known	chr17	+	1184	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	71.175838597097	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	-10	True	NA	NA	False	ATTAAA	-32	NA	76726842	76733936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_83838.known	chr17	-	1357	5	FSM	ENSG00000161547.17	ENST00000452355.7	1357	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1007.45930438902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGAAGCAAATGGTT	0	True	NA	NA	False	NA	NA	NA	76737331	76734251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76734563_76735060_76735159_76735771_76735876_76736153_76736465_76736798
transcript_83839.nic	chr17	+	1042	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	-6	0	intron_retention	FALSE	canonical	2	6	junction_3	81.6374097253622	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	746	False	NA	NA	False	ATTAAA	-17	NA	76726823	76733880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_76727179_76732977_76733216_76733292_76733382_76733520
transcript_83842.nic	chr17	+	1069	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	2	0	intron_retention	FALSE	canonical	2	6	junction_3	83.0582125178881	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	-21	True	NA	NA	False	ATTAAA	-17	NA	76726831	76733880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_76727214_76732977_76733216_76733292_76733382_76733520
transcript_83846.known	chr17	-	1359	4	FSM	ENSG00000161547.17	ENST00000585202.5	1359	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	993.328076048728	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAATATGTCTCGGTC	585	False	NA	-10	True	ATTAAA	-23	NA	76737308	76734122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76734563_76735060_76735159_76736153_76736465_76736798
transcript_83854.known	chr17	-	1888	3	FSM	ENSG00000161547.17	ENST00000359995.10	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	2084	junction_1	176	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	0	True	NA	-2	True	ATTAAA	-31	NA	76737331	76734114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76735159_76736153_76736465_76736798
transcript_83860.known	chr17	-	1390	3	FSM	ENSG00000161547.17	ENST00000508921.7	1390	3	0	0	0	0	multi-exon	TRUE	canonical	2	427	junction_2	828.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCACTAGGCGCAG	0	True	NA	NA	False	NA	NA	NA	76737331	76734576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76735159_76736153_76736465_76736834
transcript_83862.known	chr17	-	2885	2	FSM	ENSG00000161547.17	ENST00000392485.2	2885	2	0	0	0	0	multi-exon	FALSE	canonical	3	2436	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	-2	True	NA	-2	True	ATTAAA	-31	NA	76737333	76734114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76736465_76736798
transcript_83864.known	chr17	+	1141	1	FSM	ENSG00000092931.12	ENST00000590393.1	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATAGCGCGCTTTAATTG	575	False	NA	1	True	AATAAA	-13	NA	76737386	76738527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76737400_76738500
transcript_83865.known	chr17	+	1006	4	FSM	ENSG00000181038.14	ENST00000590964.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_1	67.5886249469703	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	1	True	NA	NA	False	ATTAAA	-15	NA	76726853	76733878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727179_76732977_76733216_76733292_76733378_76733520
transcript_83866.known	chr17	+	1128	5	FSM	ENSG00000181038.14	ENST00000341249.11	1128	5	0	0	0	0	multi-exon	FALSE	canonical	1	44	junction_1	60.2634839683203	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	-14	True	NA	NA	False	ATTAAA	-17	NA	76726838	76733880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_83869.known	chr17	+	2908	18	FSM	ENSG00000129657.16	ENST00000443798.8	2908	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	45.3752520082224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	34	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77214020_77216548
transcript_83870.known	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	23.5981990838284	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	-29	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_83873.nic	chr17	+	845	6	ISM	ENSG00000129657.16	ENST00000436233.9	5500	17	-97	23552	-60	0	5prime_fragment	FALSE	canonical	3	135	junction_4	22.5335305711289	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTATCTTGGGATTT	NA	False	NA	NA	False	ATTAAA	-4	NA	77140871	77193549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420
transcript_83874.known	chr17	+	2185	3	FSM	ENSG00000234912.12	ENST00000434411.6	2185	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTCGTTCTCCTGTGTG	NA	False	NA	20	True	AATAAA	-20	NA	77088630	77094990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77088950_77089152_77089272_77093243
transcript_83875.known	chr17	+	1338	4	FSM	ENSG00000234912.12	ENST00000566583.5	1338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.131126469709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTACTGACTCGTTCTC	31	True	NA	13	True	AATAAA	-13	NA	77088748	77094983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77094069
transcript_83876.known	chr17	+	603	4	FSM	ENSG00000234912.12	ENST00000561633.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	15.8394724940223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATTGAATTAAAATAA	31	True	NA	-31	True	AAAACA	-9	NA	77088748	77099196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77099017
transcript_83882.known	chr17	+	3733	12	FSM	ENSG00000184640.20	ENST00000427177.6	3733	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	215.076884196565	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	28	True	NA	33	True	AATAAA	-22	NA	77281498	77500593	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77281555_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_83883.known	chr17	+	3996	12	FSM	ENSG00000184640.20	ENST00000449803.6	3996	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	231.720942172524	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGCTCCTGAGTGAGAA	1564	False	NA	32	True	AATAAA	-21	NA	77287890	77500592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77288211_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_83891.known	chr17	+	2160	11	FSM	ENSG00000184640.20	ENST00000591198.5	2160	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	199.267558824812	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACTTGCAGAGGAGCCCA	-20	True	NA	NA	False	NA	NA	NA	77281450	77499029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77281555_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_83893.known	chr17	+	3984	11	FSM	ENSG00000184640.20	ENST00000423034.6	3984	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	155.357941541461	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	99	False	NA	34	True	AATAAA	-23	NA	77373189	77500594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77373553_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_83903.known	chr17	+	3026	10	FSM	ENSG00000184640.20	ENST00000541152.6	3026	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	195.80943116544	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	16	False	NA	34	True	AATAAA	-23	NA	77450736	77500594	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77450787_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_83906.known	chr17	+	1691	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	145.644247787478	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCGCACTTGCAGAGGA	494	False	NA	NA	False	NA	NA	NA	77451243	77499024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_83908.nic	chr17	+	3146	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	184.679903256057	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGCTCCTGAGTGAGAA	4120	False	NA	32	True	AATAAA	-21	NA	77466388	77500592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_83930.nnic	chr17	-	2808	20	NNC	ENSG00000141524.17	novel	8387	20	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_13	74.489881073012	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	5478	False	NA	-16	True	ATTAAA	-14	NA	78128827	78112921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124656_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_83931.nnic	chr17	-	2754	20	NNC	ENSG00000141524.17	novel	8387	20	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_13	82.0393797745632	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	5485	False	NA	-16	True	ATTAAA	-14	NA	78128820	78112921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124656_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128658
transcript_83947.known	chr17	-	8387	20	FSM	ENSG00000141524.17	ENST00000590602.6	8387	20	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_19	50.244885077531	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	-5	True	NA	2	True	AATAAA	-22	NA	78128755	78107396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_83948.nic	chr17	-	3196	20	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-354	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_19	61.6044931267777	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	5169	False	NA	-16	True	ATTAAA	-14	NA	78129136	78112921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128658
transcript_83949.known	chr17	-	2786	20	FSM	ENSG00000141524.17	ENST00000322914.7	2786	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	71.2230315390088	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTGTCCCTTGGGGCTC	15	True	NA	-15	True	ATTAAA	-15	NA	78132407	78112920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78132340
transcript_83951.nic	chr17	-	2978	20	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	3	16	junction_19	71.2230315390088	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	5502	False	NA	-16	True	ATTAAA	-14	NA	78128803	78112921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126975_78128611
transcript_8396.known	chr1	-	1733	9	FSM	ENSG00000117419.16	ENST00000372257.7	1733	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_8	414.298635497391	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-16	True	NA	0	True	AATAAA	-39	NA	44355257	44221069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
transcript_8397.nnic	chr1	-	1419	9	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_8	474.585016093007	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-1	True	NA	0	True	AATAAA	-39	NA	44355311	44221069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44355259
transcript_83970.known	chr17	-	3070	19	FSM	ENSG00000141524.17	ENST00000593044.5	3070	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_18	63.103090257134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACACCAGGACAAGGAAG	5533	False	NA	NA	False	NA	NA	NA	78128772	78113075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78126367_78126523_78126649_78126776_78126907_78128658
transcript_83988.nic	chr17	-	2754	19	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	74.373100141727	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	5478	False	NA	-16	True	ATTAAA	-14	NA	78128827	78112921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_8399.nic	chr1	-	1669	8	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	480.554356754695	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	41	False	44355286	0	True	AATAAA	-39	NA	44355269	44221069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44354891
transcript_84.known	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_+_4000_4500
transcript_8400.nnic	chr1	-	1343	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_7	458.183013073802	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-1	True	NA	0	True	AATAAA	-39	NA	44355311	44221069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44355259
transcript_84041.known	chr17	-	2384	13	FSM	ENSG00000141524.17	ENST00000588087.5	2384	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_12	44.1672169777037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5575	False	NA	NA	False	NA	NA	NA	78128730	78120176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_84060.known	chr17	-	2833	19	FSM	ENSG00000141524.17	ENST00000392467.7	2833	19	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_10	43.4083396436363	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTGTCCCTTGGGGCTC	7285	False	NA	-15	True	ATTAAA	-15	NA	78127020	78112920	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776
transcript_84061.known	chr17	-	1681	12	FSM	ENSG00000141524.17	ENST00000306591.11	1681	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.5451923073286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGCTTGTCCCTTGGG	5675	False	NA	-19	True	ATTAAA	-11	NA	78128630	78112924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78113212_78113547_78113622_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_84062.known	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_3	82.4311160235556	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	-4	True	NA	29	True	AATAAA	-15	NA	78168580	78172720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
transcript_84065.known	chr17	+	2239	4	FSM	ENSG00000108639.8	ENST00000590201.1	2239	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	462.713974526621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	9	True	NA	NA	False	NA	NA	NA	78169157	78173527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78169230_78170816_78171055_78171509_78171650_78171738
transcript_84066.known	chr17	+	1553	3	FSM	ENSG00000108639.8	ENST00000588282.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_2	84	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	26	False	NA	28	True	AATAAA	-14	NA	78168610	78172719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170816_78171055_78171509
transcript_84067.known	chr17	+	2125	3	FSM	ENSG00000108639.8	ENST00000589168.1	2125	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	519	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	33	False	NA	NA	False	NA	NA	NA	78168617	78173527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170816_78171055_78171738
transcript_84069.known	chr17	+	864	2	FSM	ENSG00000108639.8	ENST00000591770.1	864	2	0	0	0	0	multi-exon	FALSE	canonical	3	1163	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAAGGACGTGCTGGTGGG	25	False	NA	NA	False	NA	NA	NA	78168609	78171574	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170816
transcript_84071.known	chr17	-	631	8	FSM	ENSG00000167900.12	ENST00000586613.1	631	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	466.343483816338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCACTCCGTGTGTCGG	321	False	NA	NA	False	NA	NA	NA	78187063	78174925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78183753_78183778_78185054_78185166_78186786_78186819_78186928
transcript_84074.known	chr17	-	642	7	FSM	ENSG00000167900.12	ENST00000590862.5	642	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	403.128046930776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGCTGCCCAGCCACT	348	False	NA	NA	False	NA	NA	NA	78187036	78174701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78174789_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_84075.known	chr17	-	1431	7	FSM	ENSG00000167900.12	ENST00000301634.12	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	125.493691740528	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTGGACGCACATT	-3	True	NA	NA	False	NA	NA	NA	78187052	78174090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_84081.known	chr17	-	1681	6	FSM	ENSG00000167900.12	ENST00000588734.5	1681	6	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_1	100.712263404215	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTATGAAATTAACTAAT	151	False	NA	NA	False	GGGGCT	-45	NA	78187233	78174120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_84083.known	chr17	-	683	5	FSM	ENSG00000167900.12	ENST00000590430.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	472.983284588367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGAAGCCGTGGCTGCC	346	False	NA	NA	False	NA	NA	NA	78187038	78174829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78175170_78175528_78175619_78185054_78185166_78186786_78186819_78186928
transcript_84084.known	chr17	+	1730	11	FSM	ENSG00000183077.16	ENST00000409257.10	1686	11	-45	1	-41	0	multi-exon	FALSE	canonical	0	0	junction_7	40.3162498255976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	2202	False	NA	24	True	AATAAA	-17	NA	78187316	78207701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204655_78204742_78204827_78204901_78205092_78205191_78205439_78205519_78205602_78205739_78205945_78206051_78206910
transcript_84085.known	chr17	+	1700	11	FSM	ENSG00000183077.16	ENST00000327898.9	1700	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	40.7142481202834	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	1	True	NA	24	True	AATAAA	-17	NA	78187361	78207701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204655_78204742_78204827_78204901_78205092_78205191_78205439_78205519_78205602_78205754_78205945_78206051_78206910
transcript_84090.nic	chr17	+	1404	8	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	39.3036322774891	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	-1	True	NA	24	True	AATAAA	-17	NA	78187329	78207701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204655_78204742_78204827_78204901_78205945_78206051_78206910
transcript_84095.nic	chr17	+	1245	6	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	17.1510932596147	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	-1	True	NA	24	True	AATAAA	-17	NA	78187329	78207701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
transcript_84097.known	chr17	+	647	5	FSM	ENSG00000183077.16	ENST00000588800.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	38.555155297314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGACGCTCAAAAGTA	1	True	NA	NA	False	NA	NA	NA	78187361	78207240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78202702_78202752_78205945_78206051_78206910
transcript_8410.nic	chr1	-	1389	7	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_6	477.159098787349	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	43	False	44355286	0	True	AATAAA	-39	NA	44355267	44221069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
transcript_84100.known	chr17	+	550	3	FSM	ENSG00000183077.16	ENST00000586731.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	40	False	NA	4	True	AATAAA	-17	NA	78187400	78197560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78197134
transcript_84101.known	chr17	+	582	3	FSM	ENSG00000183077.16	ENST00000591952.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGCAGTGGCGTGAT	1	True	NA	NA	False	NA	NA	NA	78187361	78207329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78206910
transcript_84104.known	chr17	+	2711	5	FSM	ENSG00000089685.15	ENST00000301633.8	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	711.514054674959	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-22	NA	78214185	78225636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78223464
transcript_84108.known	chr17	+	648	5	FSM	ENSG00000089685.15	ENST00000590925.6	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	842.665710706209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGGCCGGAGCTGCC	1	True	NA	NA	False	NA	NA	NA	78214262	78223554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78222827_78222993_78223464
transcript_8411.nnic	chr1	-	1159	7	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	3	238	junction_6	439.86689906026	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	0	True	AATAAA	-39	NA	44355405	44221069	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
transcript_84112.known	chr17	+	2574	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_3	267.253936671972	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	-9	True	NA	26	True	AATAAA	-21	NA	78214252	78225635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
transcript_84119.known	chr17	+	2446	3	FSM	ENSG00000089685.15	ENST00000374948.6	2446	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	829	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	2	True	NA	27	True	AATAAA	-22	NA	78214263	78225636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78223464
transcript_84122.known	chr17	+	568	2	FSM	ENSG00000089685.15	ENST00000590449.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	1758	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACAGTTTAATTGA	18	True	NA	NA	False	NA	NA	NA	78214279	78215099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679
transcript_84124.known	chr17	+	386	3	FSM	ENSG00000089685.15	ENST00000592734.5	386	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	878.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGCAGTGGTTAAGAGC	21	False	NA	NA	False	NA	NA	NA	78214316	78222992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78222827
transcript_84125.nnic	chr17	-	2456	2	NNC	ENSG00000204277.1	novel	2934	7	NA	NA	7669	-1386	intron_retention	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCAGCCAGCTGCAGT	7767	False	NA	NA	False	AAAAAG	-28	NA	78270823	78262734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_78264223_78269855
transcript_84130.known	chr17	-	2734	2	FSM	ENSG00000184557.4	ENST00000330871.3	2734	2	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	0	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTTGAGCCTTTTCTG	-2	True	NA	NA	False	AATAAA	-24	NA	78360077	78356777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78359184_78359749
transcript_84135.known	chr17	+	777	5	FSM	ENSG00000266970.2	ENST00000592569.1	777	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.03112887414927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTAATTTTTTTGTAT	-3	True	NA	NA	False	NA	NA	NA	78360452	78373911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78360774_78362672_78362752_78367192_78367267_78368727_78368894_78373774
transcript_84139.nnic	chr17	+	1039	4	NNC	ENSG00000266970.2	novel	874	3	NA	NA	-138	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	6.94422221866655	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	3594	False	NA	-13	True	CATAAA	-7	NA	78360278	78364905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_78360774_78361765_78361822_78362672_78362752_78364496
transcript_84145.nnic	chr17	+	2641	3	NNC	ENSG00000266970.2	novel	1047	3	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	45	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGGAAGTACACAGTGG	-15	True	NA	6	True	AATAAA	-17	NA	78360440	78364924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_78360774_78361765_78361822_78362672
transcript_84147.nic	chr17	+	832	3	FSM	ENSG00000266970.2	ENST00000687996.1	874	3	13	29	10	0	multi-exon	FALSE	canonical	3	12	junction_1	25	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	9	False	NA	-13	True	CATAAA	-7	NA	78360429	78364905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78360774_78362672_78362752_78364496
transcript_84175.known	chr17	+	2297	10	FSM	ENSG00000087157.19	ENST00000262764.11	2297	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	43.6348484585429	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	-5	True	NA	14	True	AATAAA	-18	NA	78378648	78424659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_84177.nic	chr17	+	2260	10	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	110	junction_9	98.0872627363569	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGCCTTTAACCAGAC	-20	True	NA	7	True	AATATA	-21	NA	78378633	78424557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419726_78424060
transcript_84181.nic	chr17	+	2159	10	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_7	88.2760820758753	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	NA	False	NA	4	True	AATATA	-18	NA	78378608	78424554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
transcript_84182.nic	chr17	+	2236	10	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_7	88.2760820758753	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	-17	True	NA	14	True	AATAAA	-18	NA	78378636	78424659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
transcript_84240.nic	chr17	+	2131	9	NIC	ENSG00000087157.19	novel	2033	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	120.454348198809	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	NA	False	NA	4	True	AATATA	-18	NA	78378631	78424554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_84241.nic	chr17	+	2244	9	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	120.454348198809	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	NA	False	NA	14	True	AATAAA	-18	NA	78378623	78424659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_84245.known	chr17	+	2033	9	FSM	ENSG00000087157.19	ENST00000589426.5	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	137.997225968495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	3	True	NA	4	True	AATATA	-18	NA	78378656	78424554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
transcript_84261.known	chr17	+	1700	9	FSM	ENSG00000087157.19	ENST00000588169.5	1700	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	170.285376280525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCGAGCCCCTGCAGGG	8	True	NA	NA	False	NA	NA	NA	78378661	78424141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392513_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419726_78424060
transcript_8429.known	chr1	-	764	6	FSM	ENSG00000117419.16	ENST00000452396.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	522.560006123699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCCTCAGCCTGCAAC	-19	True	NA	NA	False	NA	NA	NA	44355260	44247985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
transcript_84297.known	chr17	+	988	7	FSM	ENSG00000087157.19	ENST00000592043.5	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	35.758448885077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACCCAGGAAGATGCAG	16	True	NA	NA	False	NA	NA	NA	78378669	78403679	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567
transcript_84308.known	chr17	+	2710	4	FSM	ENSG00000267432.6	ENST00000663269.1	2710	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAACAGGCCAACA	8	True	NA	NA	False	AATGAA	-6	NA	78484917	78490625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78485163_78485887_78486572_78488417_78489575_78490001
transcript_84313.known	chr17	-	3756	14	FSM	ENSG00000108669.17	ENST00000589297.5	3756	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.5510637448131	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	9325	False	NA	-1	True	AATAAA	-21	NA	78723750	78674047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78696006_78696010_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78723212
transcript_84318.nic	chr17	-	3409	14	NIC	ENSG00000108669.17	novel	3290	14	NA	NA	-46	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	38.557725877599	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTTTGTTGTTCGCGG	1890	False	NA	-5	True	AATAAA	-17	NA	78782343	78674051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78676170_78676994_78677051_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_84319.nic	chr17	-	3384	13	NIC	ENSG00000108669.17	novel	3286	13	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	29.6052735542542	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	17	True	NA	-1	True	AATAAA	-21	NA	78736860	78674047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78736691
transcript_84320.known	chr17	-	3286	13	FSM	ENSG00000108669.17	ENST00000591455.5	3286	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.1541031023364	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	22	True	NA	-1	True	AATAAA	-21	NA	78782272	78674047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_84326.nnic	chr17	-	3115	11	NNC	ENSG00000108669.17	novel	3290	14	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.9599749687011	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	1890	False	NA	-1	True	AATAAA	-21	NA	78782343	78674047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78702579_78702605_78708196_78708262_78709649_78709733_78782201
transcript_84329.nnic	chr17	-	3168	11	NIC	ENSG00000108669.17	novel	3311	13	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	33.037705731482	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	1890	False	NA	-1	True	AATAAA	-21	NA	78782343	78674047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78676170_78680189_78680345_78680970_78681043_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_84338.known	chr17	-	4423	1	FSM	ENSG00000108669.17	ENST00000586299.1	4423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTGTTGTTCGCGGTGT	2583	False	NA	-2	True	AATAAA	-20	NA	78678471	78674048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78674000_78678500
transcript_84339.known	chr17	-	3311	13	FSM	ENSG00000108669.17	ENST00000361101.8	3311	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	31.0881363581387	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	0	True	NA	-1	True	AATAAA	-21	NA	78782294	78674047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692496_78698267_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_84343.nic	chr17	-	3940	21	NIC	ENSG00000055483.20	novel	5885	21	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	39.7900427242797	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCACCGTTCTGACTGC	518	False	NA	-86	True	NA	NA	NA	78840919	78787467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_84345.nic	chr17	-	5999	21	FSM	ENSG00000055483.20	ENST00000592231.6	5895	21	-105	1	-32	0	multi-exon	FALSE	canonical	3	91	junction_1	28.3659567087028	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGTCTTTGTTGGT	518	False	NA	-5	True	AATAAA	-17	NA	78840919	78795652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78797903_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_8435.known	chr1	+	3042	15	FSM	ENSG00000187147.18	ENST00000361799.7	3042	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	215.87450294189	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	-1	True	NA	NA	False	ATTAAA	-16	NA	44405254	44651723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44405531_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_8436.nic	chr1	+	3241	15	NIC	ENSG00000187147.18	novel	3042	15	NA	NA	-60	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	217.462182966161	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	44405133	44651723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44405531_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_84363.known	chr17	-	3187	17	ISM	ENSG00000055483.20	ENST00000312010.10	5234	20	23	5578	8	924	5prime_fragment	FALSE	canonical	3	125	junction_2	23.52251248804	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGACACAGCGGGCAG	573	False	78840893	NA	False	AAAAAG	-18	NA	78840864	78802460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_84380.known	chr17	-	1771	6	FSM	ENSG00000055483.20	ENST00000590546.6	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	25.160286166894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTACAGAAAGAAAACTG	565	False	NA	NA	False	NA	NA	NA	78840872	78826472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_84389.known	chr17	-	2202	6	FSM	ENSG00000108679.13	ENST00000262776.8	2202	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	36.1020775025482	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTGTACAGAAAGT	19	True	NA	-15	True	ATTAAA	-19	NA	78979923	78971254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_84390.known	chr17	-	1132	6	FSM	ENSG00000108679.13	ENST00000588198.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	156.043583655337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGACGCAGGCCGAGGC	-5	True	NA	NA	False	NA	NA	NA	78979947	78972469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78972705_78972969_78973344_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_84396.known	chr17	-	936	5	FSM	ENSG00000108679.13	ENST00000585407.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	39.8748040747538	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCACTCAGGTGGCTG	7	True	NA	NA	False	NA	NA	NA	78979935	78972797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_84400.known	chr17	-	1961	5	FSM	ENSG00000108679.13	ENST00000591778.5	1961	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	166.459454522716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGTTGGGTCCACACC	24	True	NA	2	True	ATTAAA	-36	NA	78979918	78971237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78972705_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_84407.known	chr17	-	1669	6	FSM	ENSG00000171302.17	ENST00000591773.5	1669	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	60.9183059514954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTGTTC	12	False	NA	NA	False	TATAAA	-15	NA	79009778	78993486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_78998147_78998287_79009663
transcript_84413.nic	chr17	-	3082	6	NIC	ENSG00000171302.17	novel	1669	6	NA	NA	-15	0	intron_retention	FALSE	canonical	3	30	junction_1	48.6801807720555	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTTCTGTCTCCCGG	NA	False	NA	-14	True	AATAAA	-14	NA	79009832	78991719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78992141_78992409_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_84415.known	chr17	-	3287	5	FSM	ENSG00000171302.17	ENST00000392446.10	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	33.8775368053818	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-12	True	NA	-10	True	AATAAA	-18	NA	79009764	78991715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_84421.nic	chr17	-	3277	5	NIC	ENSG00000171302.17	novel	3534	4	NA	NA	-15	0	intron_retention	FALSE	canonical	3	30	junction_1	50.0618367621485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTTCTGTCTCCCGG	NA	False	NA	-14	True	AATAAA	-14	NA	79009832	78991719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78992141_78992409_78993921_78995017_78995222_78996991_78997964_79009663
transcript_84424.known	chr17	-	3534	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	8.5764535535124	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTGTCTCCCGGTCT	NA	False	NA	-11	True	AATAAA	-17	NA	79009817	78991716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
transcript_84429.known	chr17	+	2886	4	FSM	ENSG00000173918.15	ENST00000579760.6	2886	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.10960933531265	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTCGTCAGTTTGCT	7	True	NA	6	True	ATTAAA	-22	NA	79024168	79049788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79024495_79043954_79044124_79046554_79046695_79047537
transcript_84431.known	chr17	+	2624	3	FSM	ENSG00000173918.15	ENST00000311661.4	2624	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	9	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCCTCGTCAGTTTGC	6	True	NA	5	True	ATTAAA	-21	NA	79024260	79049787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79024495_79046554_79046695_79047537
transcript_84440.known	chr17	+	4603	14	FSM	ENSG00000167280.17	ENST00000579016.6	4603	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_13	7.13189353015339	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGAGTCCTGGT	-1	True	NA	18	True	AATAAA	-18	NA	79074823	79088599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79075091_79077429_79077498_79077662_79077865_79079488_79079638_79080206_79080365_79080924_79081074_79081897_79082064_79083019_79083124_79083481_79083591_79083760_79083952_79084537_79084687_79085233_79085343_79085619_79085735_79085932
transcript_84461.nic	chr17	-	1580	12	NIC	ENSG00000167281.20	novel	1519	15	NA	NA	-316	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	29.2617144727423	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	NA	False	NA	25	True	AAAACA	-41	NA	79183788	79090799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79103161_79103255_79104072_79104127_79106650_79106789_79115493_79115749_79183263
transcript_84471.nic	chr17	-	1263	11	NIC	ENSG00000167281.20	novel	1143	11	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	27.1014759745664	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	159	False	NA	25	True	AAAACA	-41	NA	79183564	79090799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79104072_79104127_79106650_79106789_79115493_79115749_79183263
transcript_84477.nic	chr17	-	1977	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	962	-1471	180	0	3prime_fragment	FALSE	canonical	3	76	junction_1	11.0538454847171	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGTATGCTCTGGCA	NA	False	NA	-1	True	AATAAA	-23	NA	79097546	79089344	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_84479.nic	chr17	-	522	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	962	-16	180	0	3prime_fragment	FALSE	canonical	3	76	junction_1	11.0538454847171	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	NA	False	NA	25	True	AAAACA	-41	NA	79097546	79090799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_8448.nic	chr1	+	2000	11	NIC	ENSG00000187147.18	novel	1200	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	259	junction_1	103.631269412277	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	-13	True	NA	NA	False	ATTAAA	-16	NA	44631951	44651723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44632209_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_84487.nnic	chr17	+	1025	2	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTGAACGTGTGTGTTT	NA	False	NA	6	True	AATGAA	-20	NA	79183421	79186279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr17_+_79183693_79185525
transcript_84496.known	chr17	+	4628	5	FSM	ENSG00000173894.11	ENST00000310942.9	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_4	86.0014534760896	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTCAACTATGGCTGT	-27	True	NA	25	True	ATTAAA	-31	NA	79778147	79787983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79783731
transcript_8450.nic	chr1	+	2078	11	NIC	ENSG00000187147.18	novel	1200	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	259	junction_1	119.010755816439	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	-13	True	NA	NA	False	ATTAAA	-16	NA	44631951	44651723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44632209_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_84504.known	chr17	+	567	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_2	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	-12	True	NA	20	True	GATAAA	-15	NA	79778162	79779739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79778308_79778383_79778428_79779361
transcript_84505.known	chr17	-	3752	5	FSM	ENSG00000141570.11	ENST00000269385.9	3752	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	2.29128784747792	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTCTTGGTTTTATTC	-19	True	NA	NA	False	AATATA	-16	NA	79797077	79792131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_79795559_79796056_79796124_79796249_79796316_79796496_79796541_79796929
transcript_84536.nic	chr17	-	3308	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-28	-2112	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	52.500767408795	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCGATGTGTGCGTGTG	NA	False	NA	-7	True	AATACA	-21	NA	80035900	79940019	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_84538.known	chr17	-	10960	12	FSM	ENSG00000167291.16	ENST00000310924.7	10960	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	34.8640808315866	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	0	True	NA	NA	False	AATAAA	-23	NA	80035872	79932342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_84544.nic	chr17	-	3020	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-28	-2361	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	54.3320066088927	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACCGATGTGGGGATA	NA	False	NA	NA	False	CATAAA	-21	NA	80035900	79940268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949824_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_84545.nic	chr17	-	3059	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-28	-2361	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	52.500767408795	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACCGATGTGGGGATA	NA	False	NA	NA	False	CATAAA	-21	NA	80035900	79940268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_84573.known	chr17	-	4244	8	FSM	ENSG00000167291.16	ENST00000340848.11	4244	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	77.5647195204477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTGCTAATGTCTGC	12	True	NA	-22	True	NA	NA	NA	79950836	79937907	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79950755
transcript_84584.nic	chr17	-	2500	5	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-28	364	intron_retention	FALSE	canonical	3	164	junction_4	16.6639581132455	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACACCTCCCTCGAGGG	NA	False	NA	NA	False	GATAAA	-38	NA	80035900	79950206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_84587.nic	chr17	-	4461	3	ISM	ENSG00000167291.16	ENST00000310924.7	10960	12	-28	74303	-28	-56075	5prime_fragment	FALSE	canonical	3	164	junction_2	22.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACATGGATTCTGAAAG	NA	False	NA	NA	False	AAAAAG	-19	NA	80035900	80006645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_80010758_80013366_80013610_80035794
transcript_84589.known	chr17	+	4288	20	FSM	ENSG00000141519.15	ENST00000397545.9	4288	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	15.4148541521435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCTGAGTCAGCCTTA	-6	True	NA	NA	False	AATAAA	-25	NA	80036641	80100613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80081545_80081790_80081875_80082059_80084742_80084989_80086002_80086217_80087606_80087777_80088010_80088103_80089763_80089885_80095262_80095452_80097244_80097404_80099526
transcript_84595.known	chr17	+	1970	11	FSM	ENSG00000141519.15	ENST00000269318.9	1970	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	8.9	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAGTGAATATTTTA	4	True	NA	20	True	TATAAA	-15	NA	80036651	80067901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80067504
transcript_8460.known	chr1	+	2734	10	FSM	ENSG00000187147.18	ENST00000474064.5	2734	10	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	132.535203802286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	3	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44632213_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882
transcript_84601.nic	chr17	+	1988	9	ISM	ENSG00000141519.15	ENST00000269318.9	1970	11	-10	8394	0	-7263	5prime_fragment	FALSE	canonical	3	30	junction_1	4.38748219369606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGTCACCATCTTCAT	-6	True	NA	NA	False	NA	NA	NA	80036641	80059507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857
transcript_84606.known	chr17	+	714	4	FSM	ENSG00000141519.15	ENST00000576241.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTTCTGTGCAAGGGAT	29	False	NA	NA	False	NA	NA	NA	80036676	80047454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278
transcript_84609.known	chr17	+	816	3	FSM	ENSG00000141519.15	ENST00000572083.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGGTGGCGCACGCCT	16	True	NA	NA	False	ACTAAA	-17	NA	80036663	80040535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811
transcript_84611.known	chr17	+	537	3	FSM	ENSG00000141519.15	ENST00000574099.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCAGAGCCATCCCAC	13	True	NA	NA	False	NA	NA	NA	80036660	80040187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036758_80038122_80038187_80039811
transcript_84612.known	chr17	+	3549	21	FSM	ENSG00000171298.13	ENST00000390015.7	3549	21	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	34.5193786154965	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	10	True	NA	9	True	AATAAA	-15	NA	80101593	80119877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80101626_80101810_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_84616.nic	chr17	+	3530	20	NIC	ENSG00000171298.13	novel	3549	21	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	44.4502897048787	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	-10	True	NA	9	True	AATAAA	-15	NA	80101532	80119877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_80101626_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_84630.known	chr17	+	952	2	FSM	ENSG00000171298.13	ENST00000574376.1	952	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTTCCTGAGTTCTGT	13	True	NA	NA	False	AATAAA	-18	NA	80101596	80102733	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80101626_80101810
transcript_84631.known	chr17	+	3751	20	FSM	ENSG00000171298.13	ENST00000302262.8	3751	20	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	26.4104612866561	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGGTCTCTCTGGG	-3	True	NA	13	True	AATAAA	-19	NA	80101580	80119881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_84634.known	chr17	-	2524	12	FSM	ENSG00000141543.12	ENST00000649764.2	2524	12	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_7	86.4504826499726	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAGTAATTACCTGT	-2	True	NA	3	True	ATTAAA	-23	NA	80147128	80134368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792
transcript_84638.known	chr17	-	1492	11	FSM	ENSG00000141543.12	ENST00000576547.2	1492	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	358.422446283711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGGGGATTCTGCTCT	26	True	NA	-21	True	CATAAA	-29	NA	80147139	80135348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141781_80141849_80144171_80144245_80146792
transcript_84647.known	chr17	-	1579	13	FSM	ENSG00000141543.12	ENST00000647795.1	1579	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	330.754052213356	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAAGTCTTTTTCATTA	14	True	NA	29	True	AATACA	-3	NA	80147151	80135298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792_80147023_80147060
transcript_84656.nic	chr17	+	2958	18	NIC	ENSG00000181045.15	novel	2888	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	35.9316922116161	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTAATGTCTGCGTGG	-4	True	NA	15	True	AATAAA	-17	NA	80220428	80253500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_80220497_80220915_80221116_80221547_80221795_80222654_80222848_80223179_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_84657.known	chr17	+	2872	18	FSM	ENSG00000181045.15	ENST00000411502.7	2872	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	36.895344367361	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTAATGTCTGCGT	5	True	NA	13	True	AATAAA	-15	NA	80220437	80253498	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80220497_80220918_80221116_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_84676.known	chr17	+	1862	17	FSM	ENSG00000181045.15	ENST00000572725.5	1862	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	37.1886554442346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCACCCGTGGGCATC	1	True	NA	NA	False	NA	NA	NA	80220468	80252716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80220497_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_84703.known	chr17	-	2705	8	FSM	ENSG00000181523.13	ENST00000326317.11	2705	8	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	15.7155843619235	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGATACCAACCTG	0	True	NA	-20	True	AGTAAA	-29	NA	80220333	80209275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80211012_80212070_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_84704.known	chr17	-	2612	7	FSM	ENSG00000181523.13	ENST00000573150.5	2612	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	32.6326353347211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTGAACTCATTTATG	3	True	NA	-34	True	AGTAAA	-15	NA	80220360	80209289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80211012_80212070_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80217031_80217193_80220225
transcript_84707.nic	chr17	-	3809	7	NIC	ENSG00000181523.13	novel	2705	8	NA	NA	-32	0	intron_retention	FALSE	canonical	3	70	junction_3	9.52919490594854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTGAACTCATTTATG	530	False	NA	-34	True	AGTAAA	-15	NA	80220392	80209289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_84714.known	chr17	+	1519	2	FSM	ENSG00000181045.15	ENST00000572652.5	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	5	True	NA	NA	False	NA	NA	NA	80220437	80222375	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80220497_80220915
transcript_84722.known	chr17	+	5316	17	FSM	ENSG00000173821.20	ENST00000319921.4	5316	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.68666659257942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGTGTACATATTTATG	14	True	NA	6	True	TATAAA	-15	NA	80260869	80321463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80260903_80263573_80263779_80273240_80273405_80287814_80288364_80288632_80288756_80289658_80289838_80290569_80290729_80291627_80291828_80294719_80295004_80295556_80295814_80298320_80298519_80306251_80306469_80307127_80307202_80309017_80309172_80313011_80313168_80317187_80317278_80319189
transcript_84724.nic	chr17	+	1956	5	ISM	ENSG00000173821.20	ENST00000319921.4	5316	17	-24	31850	-6	-2394	5prime_fragment	FALSE	canonical	3	17	junction_4	1.58113883008419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGGCCGGCCTTCAAG	-10	True	NA	NA	False	AAAAAG	-5	NA	80260845	80289613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80260903_80263573_80263779_80273240_80273405_80287814_80288364_80288632
transcript_84726.nic	chr17	+	624	4	ISM	ENSG00000173821.20	ENST00000508628.6	17730	69	-71	116402	-57	-13097	5prime_fragment	FALSE	canonical	2	2	junction_3	8.73053390247253	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCGAGTCAATAGTTT	5713	False	NA	NA	False	NA	NA	NA	80260794	80278910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80260903_80263573_80263779_80273240_80273405_80278763
transcript_84727.nnic	chr17	+	502	4	NNC	ENSG00000173821.20	novel	17730	69	NA	NA	-24	-13097	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.9566858950296	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCGAGTCAATAGTTT	-28	True	NA	NA	False	NA	NA	NA	80260827	80278910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_80260903_80263662_80263779_80273240_80273405_80278763
transcript_84729.nic	chr17	+	477	3	ISM	ENSG00000173821.20	ENST00000319921.4	5316	17	-75	48059	-57	-18603	5prime_fragment	FALSE	canonical	3	20	junction_1	0.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	5713	False	NA	51	True	AAGAAA	-45	NA	80260794	80273404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80260903_80263573_80263779_80273240
transcript_84730.nnic	chr17	+	355	3	NNC	ENSG00000173821.20	novel	5316	17	NA	NA	-24	-18603	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	-28	True	NA	51	True	AAGAAA	-45	NA	80260827	80273404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_80260903_80263662_80263779_80273240
transcript_84731.nnic	chr17	+	966	3	NNC	ENSG00000173821.20	novel	5316	17	NA	NA	-7	-18603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	-11	True	NA	51	True	AAGAAA	-45	NA	80260844	80273404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_80261442_80263573_80263779_80273240
transcript_84746.nic	chr17	+	1182	10	NIC	ENSG00000173818.17	novel	2820	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.1179174895762	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	NA	False	NA	25	True	AATAGA	-22	NA	80415151	80430341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_84750.nic	chr17	+	1159	10	NIC	ENSG00000173818.17	novel	908	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	31.8437543540021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	266	False	NA	25	True	AATAGA	-22	NA	80415442	80430341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_80415519_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_84754.nic	chr17	+	1393	9	ISM	ENSG00000173818.17	ENST00000518137.6	2820	10	-15	7743	-13	0	5prime_fragment	FALSE	canonical	0	0	junction_3	29.1965323283434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	NA	False	NA	27	True	AATAGA	-24	NA	80415151	80430343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_84757.nic	chr17	+	1047	9	NIC	ENSG00000173818.17	novel	2680	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	16.1322658049017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	NA	False	NA	25	True	AATAGA	-22	NA	80415151	80430341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_84763.known	chr17	+	1226	8	FSM	ENSG00000173818.17	ENST00000323854.9	1226	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	14.121918121437	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	7	True	NA	27	True	AATAGA	-24	NA	80415183	80430343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_84774.known	chr17	+	690	2	FSM	ENSG00000173818.17	ENST00000520537.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTCTGGGGAGTCT	-12	True	NA	NA	False	NA	NA	NA	80415164	80416253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649
transcript_84776.known	chr17	+	2680	9	FSM	ENSG00000173818.17	ENST00000520367.5	2680	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	27.2304976083802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTTGATTTTTTTTC	-10	True	NA	1	True	AATAAA	-17	NA	80415166	80438081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_84778.known	chr17	+	5734	30	FSM	ENSG00000141564.15	ENST00000544334.6	5734	30	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	10.6201298553768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGCGGCTGGCGGCTGTG	36	False	NA	8	True	AGTAAA	-14	NA	80545467	80966368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009_80754186_80791449_80791510_80822200_80822302_80823078_80823224_80837921_80837998_80846472_80846575_80855463_80855548_80857789_80857901_80891719_80891838_80892728_80892870_80893706_80893866_80908810_80908930_80922723_80922828_80923489_80923674_80925369_80925481_80940495_80940602_80945666_80945782_80947226_80947352_80949442_80949548_80957623_80957731_80960077_80960206_80961393_80961481_80962460_80962578_80962927_80963058_80964261
transcript_84779.known	chr17	+	2286	9	FSM	ENSG00000141564.15	ENST00000570891.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	3.6721077053921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTTTATGCTTATTTC	25	True	NA	9	True	ATTAAA	-20	NA	80544876	80823620	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009_80754186_80791449_80791510_80822200_80822302_80823078
transcript_84781.known	chr17	+	2499	6	FSM	ENSG00000141564.15	ENST00000649732.1	2499	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	4.31740662898458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAAACTTGGCCTTCCT	22	True	NA	NA	False	NA	NA	NA	80544873	80755098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009
transcript_84787.known	chr17	+	1664	8	FSM	ENSG00000176108.9	ENST00000325167.9	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_7	13.7425304386471	647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCGTGGACTTGGGCG	-19	True	NA	26	True	ATTAAA	-19	NA	80991840	81000133	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80991982_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365_80998421_80999097
transcript_84791.known	chr17	-	4014	2	FSM	ENSG00000226137.5	ENST00000573167.2	4014	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	81034881	81029701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81033399_81034564
transcript_84797.known	chr17	+	2229	16	FSM	ENSG00000175866.16	ENST00000575245.5	2229	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	23.3748202607469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTGATCTGTCCGCC	8	True	NA	21	True	AATAAA	-16	NA	81035157	81116225	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110956_81115769
transcript_84799.known	chr17	+	2129	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	14.5428641594145	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	12	False	NA	20	True	AATAAA	-15	NA	81035161	81116224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
transcript_848.known	chr1	-	2004	18	FSM	ENSG00000127054.22	ENST00000527098.5	2004	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	147.729904107036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTGGACAGACCCTGG	-9	True	NA	NA	False	NA	NA	NA	1324666	1311822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1323180_1323288_1324580
transcript_84800.known	chr17	+	2133	15	FSM	ENSG00000175866.16	ENST00000572329.5	2133	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	23.5892789553359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1	True	NA	NA	False	AAAAAG	-10	NA	81035150	81109372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085716_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_84805.known	chr17	+	1939	14	FSM	ENSG00000175866.16	ENST00000321280.11	1939	14	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_13	12.8450022514687	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTGCCAGGCAGGAC	3622	False	NA	NA	False	NA	NA	NA	81035121	81109238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_84806.known	chr17	+	3304	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	14.4733993913257	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	1	True	NA	NA	False	AATAAA	-26	NA	81035150	81117434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
transcript_84809.known	chr17	+	2512	13	FSM	ENSG00000175866.16	ENST00000575712.5	2512	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	6.91767060987054	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	6	True	NA	NA	False	AAAAAG	-25	NA	81035155	81109387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474
transcript_84812.known	chr17	-	3673	26	FSM	ENSG00000141577.14	ENST00000269392.8	3673	26	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_14	33.6647946674267	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGAGTGACTGCCTTG	8396	False	NA	-11	True	AGTAAA	-19	NA	81222999	81189595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198105_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
transcript_84813.known	chr17	-	3630	26	FSM	ENSG00000141577.14	ENST00000450824.7	3630	26	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_14	30.5942739740625	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGAGTGACTGCCTTG	6	True	NA	-11	True	AGTAAA	-19	NA	81222965	81189595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198114_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
transcript_84814.known	chr17	-	3505	25	FSM	ENSG00000141577.14	ENST00000374782.7	3505	25	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_7	37.4836770030192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTGACTGCCTTGTCT	8450	False	NA	-8	True	AGTAAA	-22	NA	81222945	81189592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198114_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
transcript_84818.nnic	chr17	-	2490	14	NNC	ENSG00000167302.11	novel	2455	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	29.986190115337	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-15	True	NA	-5	True	AATAAA	-19	NA	81239060	81228276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81237550_81237581_81238985
transcript_84826.known	chr17	-	2455	13	FSM	ENSG00000167302.11	ENST00000637944.2	2455	13	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_12	13.6737786373124	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-10	True	NA	-5	True	AATAAA	-19	NA	81239055	81228276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_84841.known	chr17	-	2287	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	22.0555272208972	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-2	True	NA	-5	True	AATAAA	-19	NA	81239091	81228276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_84845.nic	chr17	-	2561	12	NIC	ENSG00000167302.11	novel	2455	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	59	junction_11	13.7582432090128	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-15	True	NA	-5	True	AATAAA	-19	NA	81239060	81228276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81229477_81230543_81230679_81231397_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_8485.known	chr1	+	3099	15	FSM	ENSG00000187147.18	ENST00000355387.6	3099	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.247448964545	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	23	True	NA	NA	False	ATTAAA	-16	NA	44405193	44651723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44405527_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_84868.known	chr17	+	565	3	FSM	ENSG00000224877.4	ENST00000431388.3	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_1	74.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTCTTGGCCTCTC	-24	True	NA	67	True	GGGGCT	-20	NA	81239317	81241310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81239448_81239567_81239679_81240986
transcript_84869.nic	chr17	+	1291	3	NIC	ENSG00000224877.4	novel	741	3	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	33	junction_2	364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGCCTGGGGCTTAC	-25	True	NA	31	True	GATAAA	-13	NA	81239316	81241274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81239448_81239567_81240440_81240986
transcript_84870.nic	chr17	+	1107	2	ISM	ENSG00000224877.4	ENST00000573090.1	741	3	-10	687	-4	-554	5prime_fragment	FALSE	canonical	3	761	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGT	0	True	NA	NA	False	AAAAAG	-11	NA	81239300	81240527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_81239448_81239567
transcript_8488.known	chr1	-	1579	4	FSM	ENSG00000126106.14	ENST00000372243.7	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	56.1921307262463	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-9	True	NA	-4	True	AATAAA	-20	NA	44674462	44635237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44636458_44645359_44645465_44660173_44660296_44674330
transcript_84885.known	chr17	-	4491	16	FSM	ENSG00000157637.13	ENST00000374759.8	4491	16	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_2	33.5170934831103	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGAAGTTGGTCCTGGG	-12	True	NA	NA	False	AGTAAA	-21	NA	81295307	81244810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81246674_81246884_81247062_81251492_81251613_81252194_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_8490.known	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-24	True	NA	-4	True	AATAAA	-20	NA	44674477	44635237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44636458_44645359_44645465_44674330
transcript_84907.known	chr17	-	2708	14	FSM	ENSG00000157637.13	ENST00000288439.9	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	18.717140832583	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTGTGATTACCATT	68	False	NA	-5	True	TTTAAA	-19	NA	81295267	81251195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81251613_81252194_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_84915.nic	chr17	-	3693	13	NIC	ENSG00000157637.13	novel	2708	14	NA	NA	-37	7	intron_retention	FALSE	canonical	3	200	junction_4	15.0351440151252	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCCTTGGGTCTC	NA	False	NA	-10	True	AATAAA	-25	NA	81295344	81250869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_84918.nic	chr17	-	2845	13	ISM	ENSG00000157637.13	ENST00000288439.9	2708	14	-77	522	-37	-522	5prime_fragment	FALSE	canonical	3	200	junction_4	15.0351440151252	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCACTTCCTTTTGT	NA	False	NA	NA	False	TATAAA	-30	NA	81295344	81251717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_8492.known	chr1	-	2236	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	23.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-28	True	NA	NA	False	AATAAA	-17	NA	44674481	44653246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44655210_44660173_44660296_44674330
transcript_84921.nnic	chr17	-	2892	12	NIC	ENSG00000157637.13	novel	2708	14	NA	NA	-37	7	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	61.4882908963599	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCCTTGGGTCTC	NA	False	NA	-10	True	AATAAA	-25	NA	81295344	81250869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81251613_81252194_81252684_81253072_81253241_81260237_81260395_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_8493.known	chr1	-	415	3	FSM	ENSG00000126106.14	ENST00000420706.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	62.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATGCTGCGCCTGTTGC	162	False	NA	NA	False	GGGGCT	-36	NA	44674402	44654895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44655117_44660173_44660296_44674330
transcript_84964.known	chr17	-	1627	1	FSM	ENSG00000157637.13	ENST00000573058.1	1627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAACTTCTCGCCCCTT	NA	False	NA	-17	True	AATAAA	-18	NA	81252503	81250876	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81250900_81252500
transcript_84966.known	chr17	-	1536	1	FSM	ENSG00000279692.1	ENST00000624417.1	1536	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCAATACAATTAAATCAG	1425	False	NA	-40	True	NA	NA	NA	81397144	81395608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81395600_81397100
transcript_84971.known	chr17	-	2005	7	FSM	ENSG00000184009.13	ENST00000572105.7	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	6943.3511941681	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	1904	False	NA	27	True	AATAAA	-11	NA	81512851	81509977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511762_81511804_81511902_81512143_81512231_81512361_81512733
transcript_8498.known	chr1	-	2075	2	FSM	ENSG00000126106.14	ENST00000476724.1	2075	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	11	True	NA	NA	False	AATAAA	-17	NA	44674442	44653246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44655210_44674330
transcript_84980.known	chr17	-	1860	7	FSM	ENSG00000184009.13	ENST00000680227.1	1860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7585.37719892689	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	1979	False	NA	28	True	AATAAA	-12	NA	81512776	81509976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512614
transcript_84981.known	chr17	-	1749	7	FSM	ENSG00000184009.13	ENST00000681092.1	1749	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7446.35925954572	5106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	0	True	NA	28	True	AATAAA	-12	NA	81512800	81509976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512247_81512361_81512733
transcript_84984.known	chr17	-	2185	7	FSM	ENSG00000184009.13	ENST00000679778.1	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7606.049881874	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	642	False	NA	28	True	AATAAA	-12	NA	81514113	81509976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81513626
transcript_84989.known	chr17	-	1993	7	FSM	ENSG00000184009.13	ENST00000576214.3	1993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7270.86559878228	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	1904	False	NA	28	True	AATAAA	-12	NA	81512851	81509976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_84994.known	chr17	-	1128	6	FSM	ENSG00000184009.13	ENST00000571691.6	1128	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6195.74993039584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	1	True	NA	NA	False	NA	NA	NA	81512799	81510689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511579_81511926_81512143_81512231_81512361_81512733
transcript_84996.known	chr17	-	1137	6	FSM	ENSG00000184009.13	ENST00000644774.2	1137	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6348.29802072965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	1992	False	NA	NA	False	NA	NA	NA	81512763	81510689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512116_81512231_81512361_81512733
transcript_84997.known	chr17	-	1449	6	FSM	ENSG00000184009.13	ENST00000571721.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	6445.86870483723	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	1977	False	NA	NA	False	NA	NA	NA	81512778	81510689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512463
transcript_84999.known	chr17	-	2001	6	FSM	ENSG00000184009.13	ENST00000575087.5	2001	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	6455.0490811457	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGTGTAAGGAAAAATAAA	1965	False	NA	-3	True	NA	NA	NA	81512790	81510007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512605
transcript_85.known	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2837	junction_1	156	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_3826_3966_4480_4687
transcript_85000.known	chr17	-	1919	6	FSM	ENSG00000184009.13	ENST00000573283.7	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_5	972.401768817807	8036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	1	True	NA	34	True	AATAAA	-18	NA	81512799	81509970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_85006.known	chr17	-	1228	6	FSM	ENSG00000184009.13	ENST00000575659.6	1228	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	6455.44822920919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	115	False	NA	NA	False	NA	NA	NA	81514640	81510689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81514546
transcript_85007.known	chr17	-	2141	6	FSM	ENSG00000184009.13	ENST00000679535.1	2141	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	6180.66490274307	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	1904	False	NA	27	True	AATAAA	-11	NA	81512851	81509977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_8501.known	chr1	+	2862	21	FSM	ENSG00000142945.13	ENST00000372224.9	2862	21	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	61.6200251541656	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGATGTGTCTGAG	-18	True	NA	29	True	AATAAA	-37	NA	44739836	44767767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753131_44753255_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
transcript_85012.known	chr17	-	1895	6	FSM	ENSG00000184009.13	ENST00000679410.1	1895	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6325.96926960604	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	1904	False	NA	28	True	AATAAA	-12	NA	81512851	81509976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_85015.known	chr17	-	2241	5	FSM	ENSG00000184009.13	ENST00000574671.6	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_4	849.349898451751	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	1904	False	NA	28	True	AATAAA	-12	NA	81512851	81509976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81512143_81512231_81512361_81512733
transcript_85016.known	chr17	-	1958	5	FSM	ENSG00000184009.13	ENST00000576917.5	1958	5	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_4	1082.03220261691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGCTGCCGTAACCA	1975	False	NA	13	True	NA	NA	NA	81512780	81509991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_85033.known	chr17	-	2256	5	FSM	ENSG00000184009.13	ENST00000575842.5	2256	5	0	0	0	0	multi-exon	FALSE	canonical	3	15646	junction_4	470.7878370349	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGCCGTAACCAATG	1974	False	NA	16	True	NA	NA	NA	81512781	81509988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231
transcript_85034.known	chr17	-	1842	6	FSM	ENSG00000184009.13	ENST00000680727.1	1842	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6459.43971564098	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	2251	False	NA	28	True	AATAAA	-12	NA	81512504	81509976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231
transcript_85035.known	chr17	-	1698	4	FSM	ENSG00000184009.13	ENST00000576209.5	1698	4	0	0	0	0	multi-exon	FALSE	canonical	3	15865	junction_2	445.054553460085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGTAAGGAAAAATAAAAGT	2605	False	NA	0	True	NA	NA	NA	81512150	81510004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902
transcript_8505.known	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	4302.76963826789	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	7	True	NA	52	True	AATATA	-21	NA	44775572	44778779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
transcript_85053.known	chr17	-	3822	9	FSM	ENSG00000185504.17	ENST00000443656.6	3822	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	59.5288795459817	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCGGCTGTTTTCTCTC	8504	False	NA	-1	True	NA	NA	NA	81552376	81539884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551731_81552053_81552165
transcript_85054.known	chr17	-	3597	9	FSM	ENSG00000185504.17	ENST00000327787.13	3597	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	57.6550897579737	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCAGGCCTCGGCTGTTT	-2	True	NA	-7	True	NA	NA	NA	81552353	81539890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551927_81552053_81552165
transcript_85056.known	chr17	-	4381	17	FSM	ENSG00000182446.14	ENST00000331134.11	4381	17	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_3	56.7636272184927	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTCCTGGTGTGTC	-28	True	NA	-5	True	AATAAA	-15	NA	81637112	81556886	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81559417_81565504_81565608_81567416_81567534_81569015_81569112_81572016_81572089_81588943_81589105_81596115_81596243_81597244_81597317_81600340_81600428_81604547_81604728_81606690_81606815_81608727_81608823_81610209_81610259_81613317_81613495_81622165_81622279_81629724_81629806_81636915
transcript_8506.known	chr1	+	778	6	FSM	ENSG00000142937.12	ENST00000396651.8	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	7586	junction_1	1650.31177660465	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	-26	True	NA	52	True	AATATA	-21	NA	44775539	44778779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_85068.known	chr17	+	1896	2	FSM	ENSG00000182612.10	ENST00000571914.1	1896	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTGGTGGTTTGGAAT	NA	False	NA	NA	False	AATATA	-22	NA	81637170	81639177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81637407_81637517
transcript_85070.known	chr17	+	1837	4	FSM	ENSG00000182612.10	ENST00000574882.5	1837	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCAGCGTAGGGAATTC	NA	False	NA	NA	False	AGTAAA	-14	NA	81637197	81648748	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81637407_81642306_81642449_81644991_81645630_81647900
transcript_85071.known	chr17	-	458	4	FSM	ENSG00000185527.12	ENST00000571004.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.10960933531265	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGGGACTGCAACCT	20	True	NA	NA	False	NA	NA	NA	81653694	81650962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81653670
transcript_85073.known	chr17	-	553	2	FSM	ENSG00000204237.5	ENST00000571092.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTGGGCTCCCAAGCA	26	True	NA	NA	False	NA	NA	NA	81666578	81665460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666149
transcript_85074.known	chr17	-	923	2	FSM	ENSG00000204237.5	ENST00000571757.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCACACCCCCTCACAGA	-29	True	NA	-107	True	NA	NA	NA	81666633	81665140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666154
transcript_85075.known	chr17	-	803	2	FSM	ENSG00000204237.5	ENST00000571503.1	803	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAGAATTAGTTACTGA	9	True	NA	-67	True	NA	NA	NA	81666595	81665100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666276
transcript_85076.known	chr17	-	637	2	FSM	ENSG00000204237.5	ENST00000374741.4	637	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-1	True	NA	-2	True	AATAAA	-24	NA	81666605	81665035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666517
transcript_85077.known	chr17	-	821	2	FSM	ENSG00000204237.5	ENST00000575992.1	821	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCAGCCTCCTTCCTTC	151	False	NA	-122	True	NA	NA	NA	81666537	81665155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666145
transcript_85078.known	chr17	-	678	2	FSM	ENSG00000204237.5	ENST00000573786.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGTGGTTTCACAGGA	542	False	NA	-22	True	AATAAA	-4	NA	81666146	81665055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81665997
transcript_85079.known	chr17	-	1600	1	FSM	ENSG00000204237.5	ENST00000575963.1	1600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-31	True	NA	-2	True	AATAAA	-24	NA	81666635	81665035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665000_81666600
transcript_85080.known	chr17	+	890	7	FSM	ENSG00000185298.13	ENST00000574107.1	890	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	157.544085540806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGCCGCAGCTGTGAT	14	True	NA	NA	False	NA	NA	NA	81666754	81672685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81666901_81667728_81667863_81670001_81670029_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_85093.known	chr17	+	2095	6	FSM	ENSG00000185298.13	ENST00000329214.13	2095	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	15.4609184720702	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	-4	True	NA	20	True	ATTAAA	-20	NA	81666736	81673899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81666901_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_85112.known	chr17	+	437	3	FSM	ENSG00000185298.13	ENST00000574200.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	164.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTTCAAACAGAGGAAGG	31	False	NA	NA	False	NA	NA	NA	81666771	81670291	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81667008_81667728_81667863_81670224
transcript_85115.known	chr17	+	1888	7	FSM	ENSG00000185298.13	ENST00000575223.5	1888	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	128.012694682988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGAGAATATATATTT	11	True	NA	25	True	ATTAAA	-25	NA	81666751	81673904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81666901_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494_81672769_81672965
transcript_8512.nic	chr1	+	655	5	ISM	ENSG00000142937.12	ENST00000396651.8	778	6	-178	747	111	-55	5prime_fragment	FALSE	canonical	3	7586	junction_1	1796.86496084152	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGATCTAAAAAAATTCAGAA	2717	False	NA	-11	True	TTTAAA	-8	NA	44775361	44778032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999
transcript_85125.known	chr17	+	2978	23	FSM	ENSG00000185359.14	ENST00000678105.1	2978	23	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	200.674405299103	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	-18	True	NA	6	True	AATAAA	-13	NA	81683999	81702116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81684812_81684892_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_85128.known	chr17	+	3109	23	FSM	ENSG00000185359.14	ENST00000676729.1	3109	23	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	203.636571631387	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	29	True	NA	6	True	AATAAA	-13	NA	81684046	81702116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81684812_81685070_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_85144.known	chr17	+	3013	22	FSM	ENSG00000185359.14	ENST00000678196.1	3013	22	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_21	166.318152620682	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGCCCTCTGGCCGCA	NA	False	NA	NA	False	NA	NA	NA	81683962	81701929	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701243
transcript_85145.known	chr17	+	2893	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	0	0	0	0	multi-exon	FALSE	canonical	2	512	junction_17	77.2118151521707	2118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	-7	True	NA	11	True	AATAAA	-18	NA	81684010	81702121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_85146.known	chr17	+	2895	22	FSM	ENSG00000185359.14	ENST00000677243.1	2895	22	0	0	0	0	multi-exon	TRUE	canonical	1	15	junction_21	164.243983657851	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTCAGAAAGCATCAG	NA	False	NA	-5	True	AATAAA	-2	NA	81683962	81702105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701537
transcript_85154.known	chr17	+	2900	22	FSM	ENSG00000185359.14	ENST00000677109.1	2900	22	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	166.256720321779	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	NA	False	NA	6	True	AATAAA	-13	NA	81683962	81702116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694959_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_85156.known	chr17	+	2830	22	FSM	ENSG00000185359.14	ENST00000677225.1	2830	22	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_4	160.377502507857	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	3	True	NA	6	True	AATAAA	-13	NA	81684020	81702116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688751_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_85173.known	chr17	+	3293	21	FSM	ENSG00000185359.14	ENST00000678115.1	3293	21	0	0	0	0	multi-exon	FALSE	canonical	2	512	junction_16	78.4750119464789	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	NA	False	NA	6	True	AATAAA	-13	NA	81683962	81702116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_85185.known	chr17	+	2840	21	FSM	ENSG00000185359.14	ENST00000676478.1	2840	21	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_5	164.975331489287	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	-12	True	NA	6	True	AATAAA	-13	NA	81684005	81702116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_8520.known	chr1	+	981	3	FSM	ENSG00000142937.12	ENST00000470475.1	981	3	0	0	0	0	multi-exon	FALSE	canonical	3	7586	junction_1	1726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTCATGGGGCTGAAGA	12	True	NA	NA	False	NA	NA	NA	44775577	44777525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44775601_44776033_44776141_44776674
transcript_85231.known	chr17	+	2415	18	FSM	ENSG00000185359.14	ENST00000679275.1	2415	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	184.701910785327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTACAGCGATAATAAAAT	3	True	NA	-24	True	NA	NA	NA	81684020	81702086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81693930_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_8524.known	chr1	+	1115	5	FSM	ENSG00000142937.12	ENST00000485390.5	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	11038	junction_1	568.237351377046	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	70	False	NA	52	True	AATATA	-21	NA	44775635	44778779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_85250.known	chr17	+	1004	8	FSM	ENSG00000185359.14	ENST00000576498.5	1004	8	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_7	53.9508468659299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTGTTTGCATTTC	-34	True	NA	NA	False	NA	NA	NA	81683983	81691830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446
transcript_85254.known	chr17	-	763	5	FSM	ENSG00000214087.9	ENST00000573715.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	214.739376920024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACCCTACATGATGG	3391	False	NA	NA	False	NA	NA	NA	81683668	81681607	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81682150_81682490_81682676_81683012_81683127_81683592
transcript_85256.known	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	200.993003609578	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-4	True	NA	-32	True	AATAAA	-15	NA	81683797	81681186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
transcript_85257.known	chr17	-	694	4	FSM	ENSG00000214087.9	ENST00000576135.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	217.306235529494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCTCACACCTGTAAT	3391	False	NA	NA	False	AAAAAG	-20	NA	81683668	81681491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683592
transcript_8526.nic	chr1	-	1214	2	ISM	ENSG00000142959.5	ENST00000372207.4	2512	9	3227	0	3227	0	intron_retention	FALSE	canonical	3	25	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTTAGTTTTTGTTT	3226	False	NA	-6	True	AATATA	-18	NA	44784943	44783584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_44784484_44784628
transcript_85260.known	chr17	-	1856	4	FSM	ENSG00000214087.9	ENST00000570910.1	1856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	229.037114896254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATATAAGAAATAA	10	True	NA	-67	True	NA	NA	NA	81683738	81681221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81683127_81683535_81683595_81683692
transcript_85263.known	chr17	-	2343	3	FSM	ENSG00000214087.9	ENST00000577142.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	3278	False	NA	-32	True	AATAAA	-15	NA	81683781	81681186	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81683595_81683692
transcript_85264.known	chr17	-	1977	1	FSM	ENSG00000262049.1	ENST00000575312.1	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGGATGCGCGTATCTG	-4	True	NA	NA	False	AGTAAA	-23	NA	81703300	81701323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81701300_81703300
transcript_85265.known	chr17	+	1809	1	FSM	ENSG00000185359.14	ENST00000573080.1	1809	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAAGAGCC	7188	False	NA	NA	False	NA	NA	NA	81691205	81693014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81691200_81693000
transcript_85275.known	chr17	+	1523	12	FSM	ENSG00000183048.12	ENST00000574129.5	1523	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	100.816009485572	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTGGCAGCTCCTCAGG	185	False	NA	NA	False	NA	NA	NA	81712263	81720328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81713261_81713507_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_8528.known	chr1	+	2340	15	FSM	ENSG00000173846.13	ENST00000372201.5	2340	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.61403161162101	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTCCCCCTCACTCGC	0	True	NA	13	True	AATAAA	-14	NA	44800376	44805990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804502_44804649_44804780_44805265_44805380_44805486
transcript_85292.known	chr17	+	1946	11	FSM	ENSG00000183048.12	ENST00000331531.9	1946	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	91.7573430304082	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	7	True	NA	16	True	AATAAA	-16	NA	81712306	81721012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717756_81717862_81719830_81719888_81719975
transcript_85293.known	chr17	+	1942	11	FSM	ENSG00000183048.12	ENST00000350690.10	1942	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	26.9646064313945	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	-16	True	NA	16	True	AATAAA	-16	NA	81712283	81721012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_85296.known	chr17	+	1911	11	FSM	ENSG00000183048.12	ENST00000545862.5	1911	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	92.8562868092409	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGCCTGCGCTGCCT	157	False	NA	20	True	AATAAA	-20	NA	81712235	81721016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717481_81717492_81717783_81717862_81719830_81719888_81719975
transcript_8531.nic	chr1	+	2757	13	NIC	ENSG00000173846.13	novel	2340	15	NA	NA	-433	0	intron_retention	TRUE	canonical	2	4	junction_11	6.61385330617149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTCCCCCTCACTCGC	-6	True	NA	13	True	AATAAA	-14	NA	44799943	44805990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804502_44805265_44805380_44805486
transcript_85320.known	chr17	+	1009	5	FSM	ENSG00000262814.8	ENST00000333676.8	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_4	33.1841453106751	925	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGAGTGCCGTGCTC	-10	True	NA	29	True	AATACA	-13	NA	81703366	81707517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81703576_81704243_81704431_81704632_81704717_81706905_81707041_81707123
transcript_85322.known	chr17	+	2030	14	FSM	ENSG00000215644.10	ENST00000400723.8	2030	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.30255839186089	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCATGTCCTGGAAAGC	10	True	NA	NA	False	AATAAA	-16	NA	81804149	81814008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81804250_81808841_81809079_81809781_81809885_81810824_81810933_81811009_81811132_81811221_81811329_81811403_81811561_81811650_81811811_81811885_81811947_81812182_81812253_81812576_81812666_81812806_81812946_81813015_81813058_81813473
transcript_85323.known	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	227.57029683155	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-12	True	NA	-18	True	AATAAA	-16	NA	81833291	81822416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_85326.known	chr17	-	1282	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_4	162.915622332544	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-12	True	NA	38	True	NA	NA	NA	81833291	81822360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_85327.known	chr17	-	577	4	FSM	ENSG00000225663.8	ENST00000576431.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_3	172.666023164824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACGGCTGAGGCCTGCC	4593	False	NA	NA	False	NA	NA	NA	81833242	81823116	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81823514_81824286_81824406_81824498_81824555_81833237
transcript_85328.known	chr17	-	1123	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	366.400812711374	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	4533	False	NA	-30	True	AATAAA	-4	NA	81833302	81822428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
transcript_85332.known	chr17	-	2253	11	FSM	ENSG00000185624.16	ENST00000570907.6	2253	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	738.88551887285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCAGCCCTGGGGC	9439	False	NA	NA	False	NA	NA	NA	81860515	81843430	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845459_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85334.known	chr17	-	2451	11	FSM	ENSG00000185624.16	ENST00000680226.1	2451	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	728.653696895857	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	9461	False	NA	-7	True	AATAAA	-16	NA	81860493	81843162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845817_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85336.known	chr17	-	2377	11	FSM	ENSG00000185624.16	ENST00000680914.1	2377	11	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_6	730.481409756607	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-1	True	NA	-10	True	AATAAA	-13	NA	81860535	81843165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847013_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85339.known	chr17	-	3217	11	FSM	ENSG00000185624.16	ENST00000680416.1	3217	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	726.81662061348	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTGCCTCGGGTTTAT	9330	False	NA	-5	True	AATAAA	-18	NA	81860624	81843160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81858494_81859388_81860326
transcript_85340.known	chr17	-	2289	11	FSM	ENSG00000185624.16	ENST00000681760.1	2289	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	737.087213292973	2380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCGTGGGCTCATTGT	9364	False	NA	NA	False	NA	NA	NA	81860590	81843363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860331
transcript_85341.known	chr17	-	2218	11	FSM	ENSG00000185624.16	ENST00000681933.1	2218	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	958.642769753155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGGGCCCGGCACAG	9364	False	NA	NA	False	NA	NA	NA	81860590	81843421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859178_81859388_81860346
transcript_85342.known	chr17	-	2386	11	FSM	ENSG00000185624.16	ENST00000680400.1	2386	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	736.792922061552	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	9940	False	NA	-10	True	AATAAA	-13	NA	81860856	81843165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860698
transcript_85343.known	chr17	-	2471	11	FSM	ENSG00000185624.16	ENST00000679889.1	2471	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	959.848217167694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTTACCACCTGTCCT	9474	False	NA	-19	True	AATAAA	-4	NA	81860480	81843174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855689_81859180_81859388_81860326
transcript_85345.known	chr17	-	2371	11	FSM	ENSG00000185624.16	ENST00000680593.1	2371	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	724.42876806488	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-1	True	NA	-10	True	AATAAA	-13	NA	81860535	81843165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845626_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85346.known	chr17	-	2510	11	FSM	ENSG00000185624.16	ENST00000681420.1	2510	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	741.837050840682	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-1	True	NA	-10	True	AATAAA	-13	NA	81860535	81843165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845304_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85349.known	chr17	-	2309	10	FSM	ENSG00000185624.16	ENST00000681161.1	2309	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	757.888603821478	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	9343	False	NA	-7	True	AATAAA	-16	NA	81860611	81843162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81860326
transcript_85351.known	chr17	-	2302	10	FSM	ENSG00000185624.16	ENST00000571617.2	2302	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	779.036077390863	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	9431	False	NA	-7	True	AATAAA	-16	NA	81860523	81843162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85353.known	chr17	-	2711	10	FSM	ENSG00000185624.16	ENST00000679366.1	2711	10	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_5	770.992450043897	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCGAATTGAACACATTGG	9430	False	NA	-51	True	NA	NA	NA	81860524	81843206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85355.known	chr17	-	2157	9	FSM	ENSG00000185624.16	ENST00000415593.6	2157	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	798.131871544421	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTACCACCTGTCCTT	1	True	NA	-18	True	AATAAA	-5	NA	81860533	81843173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81859178_81859388_81860326
transcript_85359.known	chr17	-	2907	9	FSM	ENSG00000185624.16	ENST00000680208.1	2907	9	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_2	128.246588648587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGGCCAAATAAAGTTG	9379	False	NA	-38	True	NA	NA	NA	81860575	81843193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85360.known	chr17	-	3905	8	FSM	ENSG00000185624.16	ENST00000680799.1	3905	8	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_1	136.157321971793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGCCAAATAAAGTTGAA	9434	False	NA	-36	True	NA	NA	NA	81860520	81843191	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_85365.known	chr17	-	2469	11	FSM	ENSG00000185624.16	ENST00000681031.1	2469	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	737.381509125364	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	9341	False	NA	-46	True	NA	NA	NA	81860613	81843201	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860336
transcript_85366.known	chr17	-	2367	11	FSM	ENSG00000185624.16	ENST00000574914.2	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	737.381509125364	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-3	True	NA	-10	True	AATAAA	-13	NA	81860573	81843165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859290_81860336
transcript_85370.known	chr17	-	637	7	FSM	ENSG00000141522.12	ENST00000579121.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	438.793294793295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACGTGTGCGTCTGCTGC	1571	False	NA	NA	False	NA	NA	NA	81870664	81868505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81868585_81868988_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81870635
transcript_85371.known	chr17	-	886	7	FSM	ENSG00000141522.12	ENST00000584461.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	310.442515702272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGGTGTGCTGCTG	20	True	NA	68	True	NA	NA	NA	81871329	81868259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81868585_81868988_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_85373.nnic	chr17	-	1824	7	NNC	ENSG00000141522.12	novel	1837	6	NA	NA	-24	0	intron_retention	FALSE	non_canonical	0	0	junction_1	377.554595021994	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	9584	False	NA	-18	True	AATAAA	-14	NA	81871402	81867720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_81868970_81869047_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_85374.nnic	chr17	-	1799	7	NNC	ENSG00000141522.12	novel	815	7	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	377.554595021994	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	-30	True	NA	-18	True	AATAAA	-14	NA	81871379	81867720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_81868976_81869055_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_85377.known	chr17	-	815	7	FSM	ENSG00000141522.12	ENST00000583868.5	815	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	377.554595021994	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGGCCGCAGCCAGGCC	12	True	NA	NA	False	NA	NA	NA	81871337	81868630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81868944_81869055_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_85378.known	chr17	-	1568	6	FSM	ENSG00000141522.12	ENST00000400721.8	1568	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	393.068441877493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTCCCTGACCCAGC	-27	True	NA	NA	False	NA	NA	NA	81871376	81867896	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81868944_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_8538.known	chr1	-	1900	12	FSM	ENSG00000070785.17	ENST00000360403.7	1900	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	56.0072309381152	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-4	True	NA	NA	False	NA	NA	NA	44986595	44850521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44851004_44857703_44857808_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_85381.known	chr17	-	1517	6	FSM	ENSG00000141522.12	ENST00000541078.6	1517	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	402.39880715529	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCTCTAACTCCCTGT	1261	False	NA	-12	True	NA	NA	NA	81870974	81868339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81870635
transcript_85383.known	chr17	-	1837	6	FSM	ENSG00000141522.12	ENST00000269321.12	1837	6	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_5	85.8882995523837	2910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	12	True	NA	-18	True	AATAAA	-14	NA	81871337	81867720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_85389.known	chr17	-	823	5	FSM	ENSG00000141522.12	ENST00000582984.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_4	95.0841732361385	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGGCGGGCAGGGCAGA	12	True	NA	NA	False	NA	NA	NA	81871337	81868869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869626_81869740_81869958_81871297
transcript_85393.known	chr17	-	2682	1	FSM	ENSG00000263731.1	ENST00000582866.1	2682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTTTTCTGTATGA	6850	False	NA	-6	True	AATAAA	-20	NA	81881106	81878424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81878400_81881100
transcript_85396.known	chr17	-	1765	14	FSM	ENSG00000185813.11	ENST00000538721.6	1765	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	143.610131336495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTCCTTCCCGGCAGC	7	True	NA	-39	True	AAAACA	-4	NA	81911406	81904342	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907203_81907258_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_85408.known	chr17	-	5089	13	FSM	ENSG00000185813.11	ENST00000538936.7	5089	13	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_7	25.675728919654	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTCCTGTCTCTCTA	14	True	NA	1	True	AATAAA	-21	NA	81911399	81900957	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_85409.known	chr17	-	1474	13	FSM	ENSG00000185813.11	ENST00000570388.5	1474	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	109.877456994397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCCCTGCTCTGCTTC	0	True	NA	NA	False	NA	NA	NA	81911354	81904811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909322_81909513_81909603_81911266
transcript_8542.known	chr1	-	1923	11	FSM	ENSG00000070785.17	ENST00000620860.4	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	109.698176830793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	5532	False	NA	NA	False	NA	NA	NA	44986722	44850521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44851004_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_85428.known	chr17	-	1857	13	FSM	ENSG00000185813.11	ENST00000570391.5	1857	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_12	112.546379328702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTAGACCACACCACCTC	6899	False	NA	-120	True	NA	NA	NA	81911267	81904423	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81910900
transcript_85434.known	chr17	-	1006	12	FSM	ENSG00000185813.11	ENST00000576343.5	1006	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	119.217351335718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGGAGGCTGCCAGG	-5	True	NA	NA	False	NA	NA	NA	81911418	81904897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81909513_81909603_81911266
transcript_85440.known	chr17	-	1628	12	FSM	ENSG00000185813.11	ENST00000571105.5	1628	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	117.431956735847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCCTGGCTCCAGGAAAAC	0	True	NA	-63	True	NA	NA	NA	81911413	81904366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_8545.known	chr1	-	1457	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	28.5579333208052	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAAAAACTTTACTAGG	4	True	NA	-5	True	AATAAA	-21	NA	44986587	44874526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_85496.known	chr17	-	1097	6	FSM	ENSG00000183684.8	ENST00000505490.3	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	1508	junction_5	131.260047234488	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGATTCGTCCCACTG	3	True	NA	-5	True	AATAAA	-25	NA	81891586	81887834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81888146_81888240_81888419_81888519_81888584_81889181_81889330_81890688_81890821_81891322
transcript_85498.known	chr17	+	599	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1598.0032071307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGAAACAAGGGCTGGA	8	True	NA	-72	True	NA	NA	NA	81891749	81900159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_85502.known	chr17	+	578	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1569.85908780233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	24	True	ATTAAA	-15	NA	81891646	81900255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
transcript_85504.known	chr17	+	722	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	1287.45045212104	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-10	True	NA	27	True	AATAAA	-21	NA	81891731	81900356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
transcript_85506.known	chr17	+	636	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	1475.81804057576	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	4	True	NA	23	True	ATTAAA	-14	NA	81891745	81900254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
transcript_85507.known	chr17	+	638	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	1280.11622736201	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	-19	True	NA	24	True	ATTAAA	-15	NA	81891722	81900255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
transcript_85508.known	chr17	+	687	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1535.83426478539	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	13	True	NA	23	True	ATTAAA	-14	NA	81891937	81900254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
transcript_85512.known	chr17	+	668	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	1546	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-19	True	NA	27	True	AATAAA	-21	NA	81891722	81900356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891834_81894466_81894587_81899919
transcript_85513.known	chr17	+	686	3	FSM	ENSG00000141552.18	ENST00000572851.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	1818.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-7	True	NA	27	True	AATAAA	-21	NA	81891734	81900356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891864_81894466_81894587_81899919
transcript_85514.known	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1898	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	43	False	NA	23	True	ATTAAA	-14	NA	81892062	81900254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81892107_81894466_81894587_81899919
transcript_85515.known	chr17	+	575	2	FSM	ENSG00000183979.8	ENST00000333383.8	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGTGCTGGAGGACT	0	True	NA	15	True	AATAAA	-20	NA	81902237	81902905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81902527_81902619
transcript_85516.known	chr17	+	672	5	FSM	ENSG00000141552.18	ENST00000577747.5	672	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1603.35607009173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	18	True	NA	23	True	ATTAAA	-14	NA	81891759	81900254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891830_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_85517.known	chr17	+	881	4	FSM	ENSG00000141552.18	ENST00000357385.7	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	101.983658821728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	-3	True	NA	23	True	ATTAAA	-14	NA	81891738	81900254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891864_81894466_81894587_81899241_81899543_81899919
transcript_85528.known	chr17	-	1725	10	FSM	ENSG00000187531.14	ENST00000328666.11	1725	10	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_8	26.3227826965328	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-10	True	NA	-1	True	ATTAAA	-16	NA	81918176	81911938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_85536.nic	chr17	-	1814	9	ISM	ENSG00000187531.14	ENST00000328666.11	1725	10	-18	0	-18	0	intron_retention	FALSE	canonical	1	26	junction_8	27.5544914669097	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-28	True	NA	-1	True	ATTAAA	-16	NA	81918194	81911938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829
transcript_85538.nic	chr17	-	1645	9	NIC	ENSG00000187531.14	novel	1725	10	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	33.6672596894966	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	9562	False	NA	-1	True	ATTAAA	-16	NA	81918201	81911938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917829_81917968_81918038
transcript_85541.nic	chr17	-	1823	9	NIC	ENSG00000187531.14	novel	1725	10	NA	NA	-25	0	intron_retention	FALSE	canonical	1	26	junction_7	27.896852421017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	9562	False	NA	-1	True	ATTAAA	-16	NA	81918201	81911938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_85553.known	chr17	-	2511	8	FSM	ENSG00000187531.14	ENST00000571832.5	2511	8	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_6	29.6303760299033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	14	True	NA	-1	True	ATTAAA	-16	NA	81918152	81911938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_85575.known	chr17	-	1743	3	FSM	ENSG00000197063.11	ENST00000392366.7	1743	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	113	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCCGTGAGCCGACCA	4231	False	NA	NA	False	TATAAA	-33	NA	81923532	81921559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81923058_81923149_81923215_81923352
transcript_8558.known	chr1	-	3597	21	FSM	ENSG00000126107.15	ENST00000372172.5	3597	21	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_9	18.9300686739378	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCAGAATGTGTTTAT	-13	True	NA	-7	True	AATAAA	-13	NA	45011324	45002547	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239_45008322_45008535_45008702_45009143_45009227_45009368_45009483_45009567_45009684_45009985_45010122_45010200_45010294_45010545_45010707_45010888
transcript_85581.known	chr17	-	315	2	FSM	ENSG00000187531.14	ENST00000574915.1	315	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGGGTGGGGCGGCCCGG	13	True	NA	NA	False	NA	NA	NA	81918153	81917767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81917968_81918038
transcript_85582.nnic	chr17	+	2027	2	NNC	ENSG00000265688.2	novel	1895	2	NA	NA	-33	-236	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCATGGTGGTGCACA	1139	False	NA	NA	False	AAGAAA	-15	NA	81927795	81930517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81928446_81929140
transcript_85583.nnic	chr17	+	2247	2	NNC	ENSG00000265688.2	novel	1895	2	NA	NA	-33	-16	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTGCTGGGGACTCA	1139	False	NA	-4	True	NA	NA	NA	81927795	81930737	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81928446_81929140
transcript_85584.known	chr17	+	1895	2	FSM	ENSG00000265688.2	ENST00000582106.1	1895	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCCAAACCGCTTCAT	-12	True	NA	12	True	NA	NA	NA	81927828	81930753	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81928446_81929475
transcript_85598.nic	chr17	-	2130	8	NIC	ENSG00000183010.17	novel	1346	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	41	junction_7	465.779136589041	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-22	True	NA	-19	True	ATTAAA	-18	NA	81937269	81932390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81936969
transcript_85599.known	chr17	-	1346	8	FSM	ENSG00000183010.17	ENST00000402252.6	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	467.131585709366	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTCTTCACCCACTCC	8	True	NA	NA	False	NA	NA	NA	81937239	81932934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937179
transcript_85601.nnic	chr17	-	1863	8	NNC	ENSG00000183010.17	novel	1346	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	203	junction_7	411.270803084036	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	4623	False	NA	-19	True	ATTAAA	-18	NA	81937274	81932390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_85602.known	chr17	-	1904	8	FSM	ENSG00000183010.17	ENST00000619204.4	1904	8	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_7	321.126524749917	2393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_85611.known	chr17	-	1740	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	513.589221936061	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_85618.known	chr17	-	1811	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	548.259797500743	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_85622.known	chr17	-	767	7	FSM	ENSG00000183010.17	ENST00000585215.5	767	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	487.794497941728	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGGACAACGTCAGCT	5	True	NA	NA	False	GGGGCT	-39	NA	81937300	81934445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937257
transcript_85635.known	chr17	-	572	5	FSM	ENSG00000183010.17	ENST00000579698.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	612.864738339546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGATGCCGTCACGGG	-10	True	NA	NA	False	NA	NA	NA	81937257	81934970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937227
transcript_85642.known	chr17	-	2269	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_2	129.815253341046	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	5	True	NA	-19	True	ATTAAA	-18	NA	81937300	81932390	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_85643.known	chr17	-	1890	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	467.469741463203	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-10	True	NA	-12	True	ATTAAA	-25	NA	81937257	81932383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_85649.known	chr17	+	2123	17	FSM	ENSG00000169696.16	ENST00000306729.11	2123	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	147.16486025458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	1	True	NA	19	True	AATAAA	-17	NA	81977549	82017404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82015074_82015357_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_85661.known	chr17	+	1764	16	FSM	ENSG00000169696.16	ENST00000306739.9	1764	16	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	38.8722122973325	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	10	True	NA	21	True	AATAAA	-19	NA	81977628	82017406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_85662.nic	chr17	+	1841	16	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_15	109.030189499158	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGCCAGCAGGAATAAAG	738	False	NA	-16	True	NA	NA	NA	81977534	82017369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017134_82017308
transcript_85671.nic	chr17	+	2119	16	NIC	ENSG00000169696.16	novel	1919	17	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	111.014593635251	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	246	False	NA	21	True	AATAAA	-19	NA	81977864	82017406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81978340_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_85676.nnic	chr17	+	1755	16	NNC	ENSG00000169696.16	novel	5503	9	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	110.305756876058	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	249	False	NA	21	True	AATAAA	-19	NA	81977867	82017406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81977979_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_85679.nnic	chr17	+	2360	16	NNC	ENSG00000169696.16	novel	1919	17	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	111.723945508561	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	254	False	NA	21	True	AATAAA	-19	NA	81977872	82017406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81978589_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_85700.known	chr17	+	1776	15	FSM	ENSG00000169696.16	ENST00000580534.5	1776	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	150.552994263258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	15	True	NA	19	True	AATAAA	-17	NA	81977633	82017404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81977749_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012155_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_85733.known	chr17	+	720	5	FSM	ENSG00000169696.16	ENST00000581647.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	34.0248071265658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTTGATCATTTTCAA	12	True	NA	15	True	AATAAA	-15	NA	81977630	81995150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820
transcript_85744.known	chr17	+	2698	17	FSM	ENSG00000169683.8	ENST00000306688.8	2698	17	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_12	14.1574571781094	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	7	True	NA	15	True	AATACA	-22	NA	82023304	82031151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82023864_82024277_82024340_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029092_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
transcript_85750.known	chr17	-	894	5	FSM	ENSG00000169689.15	ENST00000583767.1	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	720.293169480317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCTGGCAGCGCTGC	29	False	NA	NA	False	NA	NA	NA	82022852	82018865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022638
transcript_85751.known	chr17	-	799	5	FSM	ENSG00000169689.15	ENST00000584347.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	687.711921882993	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCAGCCATGCGATAT	2	True	NA	-117	True	NA	NA	NA	82022879	82018800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022825
transcript_85752.known	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	614.020917803294	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	7	True	NA	-32	True	AATAAA	-6	NA	82022821	82018715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
transcript_85753.known	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	540.299454006757	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	23	False	NA	-19	True	AATAAA	-19	NA	82022858	82018702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
transcript_85755.known	chr17	-	752	4	FSM	ENSG00000169689.15	ENST00000580090.5	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	712.562979672674	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCACATTCCTGCCAC	8	True	NA	NA	False	NA	NA	NA	82022873	82018843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022638
transcript_85756.known	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	624.174299018756	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-11	True	NA	-19	True	AATAAA	-19	NA	82022892	82018702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
transcript_85759.known	chr17	-	861	4	FSM	ENSG00000169689.15	ENST00000577379.5	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	442.261109401323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCCTGCCACCCGACA	32	False	NA	-154	True	NA	NA	NA	82022849	82018837	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019382_82019640_82019695_82019857_82019910_82022638
transcript_85760.nic	chr17	-	855	4	NIC	ENSG00000169689.15	novel	765	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	926	junction_1	369.536947483679	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-14	True	NA	-19	True	AATAAA	-19	NA	82022895	82018702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_82019382_82019640_82019695_82019857_82019910_82022825
transcript_85764.nic	chr17	-	806	3	NIC	ENSG00000169689.15	novel	751	4	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1147	junction_1	313	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	82022900	82018702	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_82019382_82019857_82019910_82022825
transcript_85768.known	chr17	+	1038	6	FSM	ENSG00000169750.9	ENST00000306897.9	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	29.36256119619	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	9	True	NA	37	True	AATAAA	-16	NA	82031677	82034204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82031797_82032386_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_85775.nnic	chr17	+	1468	5	NNC	ENSG00000169750.9	novel	1038	6	NA	NA	-104	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	55.7286954808741	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	220	False	NA	37	True	AATAAA	-16	NA	82031956	82034204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_82032459_82032710_82032829_82032946_82033010_82033320_82033600_82033698
transcript_85776.known	chr17	+	831	5	FSM	ENSG00000169750.9	ENST00000580965.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	13.9014387744578	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAAGAAGCCGGGGAA	58	False	NA	NA	False	NA	NA	NA	82032060	82033790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_85777.known	chr17	+	730	5	FSM	ENSG00000169750.9	ENST00000584341.1	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	58.1420673867038	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTCTGCCCGCCCCC	-7	True	NA	NA	False	NA	NA	NA	82032183	82033772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82032499_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_85785.known	chr17	-	676	8	FSM	ENSG00000169738.8	ENST00000582900.5	676	8	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	356.415373359998	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCATGACCACGGGTT	8	True	NA	NA	False	NA	NA	NA	82037687	82036017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037542_82037630
transcript_85792.known	chr17	-	877	7	FSM	ENSG00000169738.8	ENST00000578273.5	877	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	401.554341140634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCGGTGGAAGGGGG	-7	True	NA	-120	True	NA	NA	NA	82037702	82035995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037089_82037449
transcript_85801.known	chr17	-	968	6	FSM	ENSG00000169738.8	ENST00000578885.5	968	6	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	116.085141168024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGCTGCCCAGACTA	51	False	NA	-20	True	AATAAA	-3	NA	82037681	82035895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
transcript_85805.known	chr17	-	1076	5	FSM	ENSG00000169738.8	ENST00000580750.5	1076	5	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_4	124.061224804529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	-2	True	NA	-5	True	AATAAA	-18	NA	82037697	82035880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036764_82036858_82037014_82037449_82037548_82037630
transcript_85809.known	chr17	-	915	7	FSM	ENSG00000169738.8	ENST00000580320.5	915	7	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_6	106.881164539564	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGCTATTCCTAGGCT	-3	True	NA	-3	True	AATAAA	-20	NA	82037698	82035878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449
transcript_85810.known	chr17	-	715	5	FSM	ENSG00000169738.8	ENST00000579842.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_1	40.5246838359043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	745	False	NA	-5	True	AATAAA	-18	NA	82036987	82035880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036764_82036858
transcript_85811.known	chr17	+	709	2	FSM	ENSG00000264569.2	ENST00000584705.2	713	2	4	0	4	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	5685	False	NA	8	True	NA	NA	NA	82037904	82039380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82038414_82039180
transcript_85817.nic	chr17	+	2050	14	NIC	ENSG00000169727.13	novel	2276	13	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	508.171778253198	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	NA	False	NA	28	True	ATTAAA	-17	NA	82051452	82057470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_82051525_82052255_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_85821.known	chr17	+	1949	14	FSM	ENSG00000169727.13	ENST00000320548.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	501.18220003621	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	-28	True	NA	28	True	ATTAAA	-17	NA	82051874	82057470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82051965_82052374_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_85822.nic	chr17	+	1863	13	NIC	ENSG00000169727.13	novel	875	8	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	3	62	junction_1	405.250359860009	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	NA	False	NA	28	True	ATTAAA	-17	NA	82051435	82057470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_82051525_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_85830.known	chr17	+	1842	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	0	0	0	0	multi-exon	TRUE	canonical	3	217	junction_3	381.132404450504	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	6	True	NA	28	True	ATTAAA	-17	NA	82051908	82057470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_85835.known	chr17	+	1855	13	FSM	ENSG00000169727.13	ENST00000584460.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	522.785249090548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	26	True	NA	21	True	ATTAAA	-10	NA	82051928	82057463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82051965_82053233_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_85848.known	chr17	-	2082	6	FSM	ENSG00000169733.12	ENST00000580953.5	2082	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	43.412440613262	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGTGGCTCCTGTCTTA	8427	False	NA	-5	True	AGTAAA	-15	NA	82051562	82047905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82050556_82050661_82050765_82051293_82051343_82051499
transcript_85849.known	chr17	-	2233	14	FSM	ENSG00000169718.18	ENST00000306796.10	2233	14	0	0	0	0	multi-exon	FALSE	canonical	1	150	junction_5	129.135083623643	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCTGCACGGCAGGAA	-1	True	NA	NA	False	NA	NA	NA	82065804	82057505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82058255_82058340_82058417_82058780_82058819_82059947_82060094_82060700_82060784_82060864_82060962_82061208_82061354_82061617_82061722_82061900_82061984_82062860_82062974_82063467_82063519_82064125_82064235_82064822_82065070_82065612
transcript_85857.known	chr17	-	8407	43	FSM	ENSG00000169710.9	ENST00000634990.1	8407	43	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	320.181715695571	478	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACCGTCCTTTCTTCCC	8334	False	NA	-10	True	ATTAAA	-15	NA	82098187	82078339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82079281_82079356_82079609_82080139_82080239_82080369_82080591_82080691_82080923_82081163_82081353_82081600_82081844_82082008_82082161_82082322_82082415_82082526_82082679_82082913_82083116_82083201_82083426_82083516_82083640_82083771_82083892_82083974_82084154_82084233_82084385_82084512_82084717_82084798_82084954_82085034_82085157_82085237_82085403_82085481_82085872_82086259_82086559_82087049_82087254_82087324_82087505_82087684_82087862_82087953_82088035_82088115_82088308_82088389_82088563_82088760_82088877_82088968_82089173_82089249_82089385_82089631_82089727_82090374_82090565_82090881_82091070_82091221_82091685_82092454_82092590_82092696_82092813_82092896_82093020_82093218_82093420_82093597_82093772_82095319_82095473_82096318_82096453_82098120
transcript_8591.known	chr1	+	1193	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	58.0372379395705	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	7	True	NA	15	True	AATAAA	-16	NA	45012253	45015575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_85914.nic	chr17	-	1641	4	ISM	ENSG00000176155.20	ENST00000389641.9	2997	17	-33	92840	-16	-5960	5prime_fragment	FALSE	canonical	3	32	junction_1	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGAGTCTCGTTTGAG	5	True	NA	NA	False	AAAAAG	-13	NA	82212846	82194309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_82195365_82198313_82198423_82201537_82201953_82212784
transcript_85916.known	chr17	-	513	2	FSM	ENSG00000176155.20	ENST00000584717.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGCGTTGTTTATCTG	-4	True	NA	-5	True	ATTAAA	-30	NA	82106375	82101459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82101867_82106269
transcript_8592.known	chr1	+	1335	10	FSM	ENSG00000126088.14	ENST00000651476.1	1335	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	251.518499430073	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	NA	False	NA	15	True	AATAAA	-16	NA	45012161	45015575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_85941.known	chr17	-	2047	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_2	80.6603915526828	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	4	True	NA	17	True	AAGAAA	-2	NA	82273697	82244361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_85949.known	chr17	-	1580	9	FSM	ENSG00000141551.15	ENST00000398519.9	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	117.513762491889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCCATCTAACCACCA	5	True	NA	-19	True	AATAAA	-17	NA	82273428	82239726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82240063_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_85957.known	chr17	-	3712	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-31	0	-31	0	multi-exon	FALSE	canonical	3	189	junction_1	70.0204211284108	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	NA	False	NA	-15	True	AATAAA	-22	NA	82273731	82242666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_85991.known	chr17	+	2659	5	FSM	ENSG00000141526.18	ENST00000392341.6	2659	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.4972822875669	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	-21	True	NA	NA	False	AATGAA	-15	NA	82228420	82240086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82228546_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_85996.known	chr17	+	2599	5	FSM	ENSG00000141526.18	ENST00000582743.6	2599	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.34477204006491	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	-6	True	NA	NA	False	AATGAA	-15	NA	82229041	82240086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82229107_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_86.known	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1288	junction_5	1014.67123458079	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
transcript_8600.known	chr1	+	1177	9	FSM	ENSG00000126088.14	ENST00000652287.1	1177	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	276.435684201588	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-4	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_86001.known	chr17	+	2662	5	FSM	ENSG00000141526.18	ENST00000392339.6	2662	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.6624340560681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	2637	False	NA	NA	False	AATGAA	-15	NA	82232231	82240086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82232360_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_86011.known	chr17	-	598	2	FSM	ENSG00000141551.15	ENST00000579308.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	295	False	NA	NA	False	NA	NA	NA	82273406	82265299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82265797_82273305
transcript_86013.known	chr17	-	1284	4	FSM	ENSG00000173762.8	ENST00000312648.8	1284	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACTTCTGCATTTA	-1	True	NA	-7	True	AATAAA	-16	NA	82317608	82314872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82315432_82316194_82316410_82316666_82316982_82317413
transcript_86014.known	chr17	-	2021	3	FSM	ENSG00000173762.8	ENST00000584284.5	2021	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGCATTTATTCCT	-13	True	NA	-2	True	AATAAA	-21	NA	82317577	82314867	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82316410_82316666_82316982_82317413
transcript_86015.known	chr17	-	2003	5	FSM	ENSG00000141574.8	ENST00000269389.8	2003	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTCTGTGGGCACAGC	-3	True	NA	NA	False	NA	NA	NA	82333766	82321023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82322371_82322877_82323012_82324581_82324891_82327146_82327293_82333699
transcript_86016.known	chr17	+	1935	2	FSM	ENSG00000182459.5	ENST00000333437.5	1935	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGTAAGTCATTCC	-2	True	NA	NA	False	CATAAA	-14	NA	82359246	82363775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82359286_82361879
transcript_86024.known	chr17	+	2167	13	FSM	ENSG00000169660.17	ENST00000327949.15	2167	13	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_10	17.8831081066898	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	-8	True	NA	20	True	AATAAA	-20	NA	82418346	82442645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441076_82441164_82441267_82441799_82441890_82442176
transcript_86028.known	chr17	+	2285	12	FSM	ENSG00000169660.17	ENST00000337014.10	2285	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	15.7600813858703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	NA	False	NA	20	True	AATAAA	-20	NA	82418317	82442645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441267_82441799_82441890_82442176
transcript_86040.known	chr17	-	1274	10	FSM	ENSG00000181396.13	ENST00000580445.5	1274	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	37.8479739986498	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAACCCCGACCATGGCA	NA	False	NA	NA	False	NA	NA	NA	82418637	82392440	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82392535_82394330_82394544_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415405_82415628_82418411
transcript_86042.known	chr17	-	4249	9	FSM	ENSG00000181396.13	ENST00000313056.10	4249	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	12.1648828601019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTCGGGAAGGGA	1	True	NA	-14	True	AATAAA	-17	NA	82418586	82389209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82392535_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415397_82415628_82418411
transcript_86057.known	chr17	-	617	8	FSM	ENSG00000178927.18	ENST00000577888.5	617	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	127.025306814936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCGGTGACCCTGCAA	-38	True	NA	NA	False	NA	NA	NA	82450775	82444034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445881_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450699
transcript_86058.known	chr17	-	2242	8	FSM	ENSG00000178927.18	ENST00000437807.6	2242	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	114.819112396101	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	28	True	NA	-6	True	CATAAA	-17	NA	82450709	82442643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450479
transcript_86060.known	chr17	-	841	8	FSM	ENSG00000178927.18	ENST00000578919.5	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	110.091798430367	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGTGCACCGCCCACA	-39	True	NA	NA	False	NA	NA	NA	82450776	82443891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450699
transcript_86064.known	chr17	-	741	8	FSM	ENSG00000178927.18	ENST00000585080.5	741	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.693342411325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCCTGAGCCCGTGCA	-38	True	NA	NA	False	NA	NA	NA	82450775	82443996	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450198_82450255_82450699
transcript_86070.known	chr17	-	1053	7	FSM	ENSG00000178927.18	ENST00000577732.5	1053	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	85.3736883745025	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGCCCGTGCACCGC	9041	False	NA	NA	False	NA	NA	NA	82449726	82443848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430
transcript_86071.known	chr17	-	1074	7	FSM	ENSG00000178927.18	ENST00000585064.5	1074	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	104.180399094818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGTGGCACATTCCCGG	-33	True	NA	NA	False	NA	NA	NA	82450770	82443822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450479
transcript_86085.known	chr17	-	668	5	FSM	ENSG00000178927.18	ENST00000581196.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	127.105025471065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGCCTGAGCCCGTG	7938	False	NA	NA	False	NA	NA	NA	82450829	82443902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82450699
transcript_86088.known	chr17	-	1849	4	FSM	ENSG00000178927.18	ENST00000342572.12	1849	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	141.554072903451	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGGGTCTCCCTGTGCT	-33	True	NA	-8	True	NA	NA	NA	82450770	82442588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82450699
transcript_86091.known	chr17	-	2073	7	FSM	ENSG00000178927.18	ENST00000306645.10	2073	7	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_6	46.4925322557887	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTCTCCCTGTGCTGCT	-15	True	NA	-5	True	NA	NA	NA	82450752	82442585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_86092.known	chr17	-	1965	6	FSM	ENSG00000178927.18	ENST00000584024.5	1965	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	107.296971066289	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-39	True	NA	-6	True	CATAAA	-17	NA	82450776	82442643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82447579_82447622_82449169_82449293_82450699
transcript_86093.known	chr17	-	598	5	FSM	ENSG00000181396.13	ENST00000577606.1	598	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	43.7349974276894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGAGTGCTGCAGCAT	-14	False	NA	NA	False	NA	NA	NA	82418601	82406421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82406483_82409367_82409411_82411454_82411531_82415405_82415628_82418405
transcript_86095.known	chr17	+	1760	13	NNC	ENSG00000141562.19	novel	1722	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	287.252888971064	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTACTTTGGTTTCT	464	False	NA	23	True	ATTAAA	-21	NA	82458663	82488265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82481812_82481836_82483186_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_86097.known	chr17	+	1454	12	FSM	ENSG00000141562.19	ENST00000582907.5	1454	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	269.532592058582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCAACTCCCCCAAG	21	False	NA	NA	False	NA	NA	NA	82458725	82488065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478570_82478668_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_86103.known	chr17	+	1722	12	FSM	ENSG00000141562.19	ENST00000374611.9	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	270.77171623722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGATTACTTTGGTTT	-8	True	NA	21	True	ATTAAA	-19	NA	82458696	82488263	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481219_82483173_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_86105.known	chr17	+	1766	11	FSM	ENSG00000141562.19	ENST00000390006.8	1766	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	240.919094303461	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCTCAATGGATTAC	-15	True	NA	13	True	ATTAAA	-11	NA	82458184	82488255	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458509_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_86110.known	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	188.424414553953	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	0	True	NA	20	True	AATAAA	-14	NA	82458740	82490537	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_86114.known	chr17	+	2598	10	FSM	ENSG00000141562.19	ENST00000577812.5	2598	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.584434882943	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAATGGATTACTTTG	7	True	NA	17	True	ATTAAA	-15	NA	82458711	82488259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82484951_82485496_82485655_82487915
transcript_86117.known	chr17	+	1487	10	FSM	ENSG00000141562.19	ENST00000345415.11	1487	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	191.611876226687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	449	False	NA	20	True	ATTAAA	-18	NA	82458648	82488262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_86118.known	chr17	-	920	3	FSM	ENSG00000265458.2	ENST00000653651.1	920	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGGCTGGAGTGCAGT	560	False	NA	NA	False	NA	NA	NA	82458207	82454139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82454414_82457437_82457549_82457672
transcript_86119.known	chr17	-	357	3	FSM	ENSG00000265458.2	ENST00000579095.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTTTGGTGGAGA	-2	True	NA	NA	False	NA	NA	NA	82458521	82454272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82454414_82457437_82457549_82458416
transcript_86120.known	chr17	+	5243	9	FSM	ENSG00000141568.21	ENST00000335255.10	5243	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	9.26012958872607	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCAGAGTATCATTT	3	True	NA	10	True	AATAAA	-20	NA	82519731	82604602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82520308_82563353_82563549_82568053_82568202_82571723_82571871_82582740_82582935_82584012_82584189_82585903_82586201_82587062_82587273_82601302
transcript_86127.known	chr17	-	2322	10	FSM	ENSG00000141580.16	ENST00000572583.5	2322	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	176.934248790509	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	121	False	NA	-18	True	AATAAA	-20	NA	82648318	82614575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619095_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_86130.known	chr17	-	2496	10	FSM	ENSG00000141580.16	ENST00000392325.9	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_8	40.342362013639	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTAGAATTGTGTGT	-5	True	NA	-4	True	AATAAA	-34	NA	82648444	82614561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_86139.nic	chr17	-	2520	9	NIC	ENSG00000141580.16	novel	2496	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	62	junction_7	178.620363830667	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	NA	False	NA	-18	True	AATAAA	-20	NA	82648584	82614575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82643948_82644024_82648273
transcript_86147.known	chr17	-	2189	7	FSM	ENSG00000141542.11	ENST00000269347.10	2189	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	13.7800177390629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGCGACCGGTTCTTT	-4	True	NA	1	True	AATAAA	-26	NA	82698687	82657066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82696388_82696854_82698454
transcript_86148.known	chr17	-	3829	6	FSM	ENSG00000141542.11	ENST00000571995.6	3829	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	4.17612260356422	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTTTGTCATTTTCT	-15	True	NA	NA	False	ATTAAA	-6	NA	82698698	82654972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82698454
transcript_86151.nic	chr17	-	643	2	ISM	ENSG00000141542.11	ENST00000269347.10	2189	7	-17	39394	-6	-35380	5prime_fragment	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATATGGCGCTTTAAGAG	-21	True	NA	NA	False	AATAAA	-26	NA	82698704	82696460	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_82696854_82698454
transcript_86157.known	chr17	+	1822	6	FSM	ENSG00000141560.15	ENST00000269373.11	1822	6	0	0	0	0	multi-exon	TRUE	canonical	3	355	junction_4	16.5336021483523	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAAGATTGTATATTTC	-23	True	NA	39	True	AATAAA	-45	NA	82716705	82728013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82722803_82722887_82726479_82726603_82726832
transcript_86163.known	chr17	+	627	4	FSM	ENSG00000141560.15	ENST00000573158.5	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	168.610662638979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATGAGGAATCTGG	58	False	NA	NA	False	NA	NA	NA	82716786	82727143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82716897_82722803_82722887_82726479_82726603_82726832
transcript_86167.known	chr17	+	3975	40	FSM	ENSG00000141556.22	ENST00000539345.6	3975	40	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_35	105.861047948314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTGTCTCTGAGCCT	54	False	NA	28	True	TATAAA	-21	NA	82752157	82942709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82937845_82937960_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_86173.known	chr17	+	7159	39	FSM	ENSG00000141556.22	ENST00000355528.9	7159	39	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_13	66.5014943701463	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATGGCTTATATGTGG	-39	True	NA	4	True	AATAAA	-20	NA	82752064	82945914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_86178.nnic	chr17	+	3772	39	NNC	ENSG00000141556.22	novel	7166	16	NA	NA	2568	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	88.0847497027374	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCCTTTTGTCTCTG	3077	False	NA	23	True	TATAAA	-16	NA	82755180	82942704	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_82755317_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_86183.known	chr17	+	7075	38	FSM	ENSG00000141556.22	ENST00000683041.1	7075	38	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_20	91.7819135199256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	-30	True	NA	-10	True	AATAAA	-6	NA	82752073	82945900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_86185.known	chr17	+	7072	38	FSM	ENSG00000141556.22	ENST00000684544.1	7072	38	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	88.5924756107591	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	-47	True	NA	-10	True	AATAAA	-6	NA	82752056	82945900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_86188.known	chr17	+	7111	38	FSM	ENSG00000141556.22	ENST00000682722.1	7111	38	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	86.1375223339684	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	170	False	NA	-10	True	AATAAA	-6	NA	82752047	82945900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_8619.known	chr1	+	820	5	FSM	ENSG00000126088.14	ENST00000460906.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	357.603481526676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCAAGAGTGTCCTAAA	21	False	NA	NA	False	NA	NA	NA	45012267	45014120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013574
transcript_86213.known	chr17	+	6789	34	FSM	ENSG00000141556.22	ENST00000684408.1	6789	34	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	96.7790170702681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	-40	True	NA	-10	True	AATAAA	-6	NA	82752063	82945900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_86223.known	chr17	+	1910	13	FSM	ENSG00000141556.22	ENST00000682107.1	1910	13	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	22.4664873880087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGGTGCTCCCTGGA	-30	True	NA	NA	False	NA	NA	NA	82752073	82815406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839
transcript_86232.known	chr17	-	1383	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1642	-1	0	multi-exon	TRUE	canonical	3	39	junction_5	7.70777024970401	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-19	True	NA	-5	True	AATAAA	-21	NA	83051810	82943790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_86235.known	chr17	+	1690	4	FSM	ENSG00000176845.13	ENST00000320095.12	1690	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	4.54606056566195	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGCCGGAGTCTGTC	-1	True	NA	8	True	AATAAA	-17	NA	83079608	83095122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_83079986_83084937_83085324_83093166_83093227_83094255
transcript_86241.known	chr18	+	4972	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_3	53.2413373235496	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	2	True	NA	10	True	AATAAA	-22	NA	158556	214629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_8625.known	chr1	+	968	3	FSM	ENSG00000126088.14	ENST00000463092.5	968	3	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	104.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTATCCTTCTCTAGT	NA	False	NA	NA	False	NA	NA	NA	45012184	45013889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135
transcript_86252.known	chr18	+	1803	15	FSM	ENSG00000101557.15	ENST00000582707.5	1803	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	148.981182896173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATTTGGAACAAAAGAGG	48	False	NA	NA	False	NA	NA	NA	158382	211391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_86257.known	chr18	+	1681	15	FSM	ENSG00000101557.15	ENST00000400266.7	1681	15	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_2	155.935507993084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTTTAGAGGAAGACAC	-19	True	NA	NA	False	AATAAA	-29	NA	158535	211350	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_158715_163307_163454_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_86259.nic	chr18	+	956	9	ISM	ENSG00000101557.15	ENST00000261601.8	4972	16	-75	16519	-54	0	5prime_fragment	FALSE	canonical	3	513	junction_3	62.6393446645158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTGTTGAGTTTGAAACT	-6	True	NA	NA	False	AAAAAG	-23	NA	158481	198110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046
transcript_86260.known	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.9287753971957	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-6	True	NA	-15	True	AATAAA	-15	NA	268047	214519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_86261.known	chr18	-	2277	20	FSM	ENSG00000079134.13	ENST00000579232.5	2277	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.6538198818744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	22	True	NA	-15	True	AATAAA	-15	NA	268019	214519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_86262.known	chr18	-	2791	10	FSM	ENSG00000079134.13	ENST00000583228.5	2791	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	161.642342576381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTACAGTCGGCTGG	NA	False	NA	-16	True	AATAAA	-14	NA	245734	214520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_244301
transcript_86264.known	chr18	-	5724	10	FSM	ENSG00000158270.12	ENST00000400256.5	5724	10	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	114.775142488839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTTCAACAACTCGTT	19	True	NA	-9	True	AATAAA	-24	NA	500701	316736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_320065_321661_321808_331667_331778_333006_333144_334741_335231_346294_347342_348064_348164_357399_357523_480706_480758_500507
transcript_86269.known	chr18	-	4719	9	FSM	ENSG00000158270.12	ENST00000582147.1	4719	9	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_8	84.6389390292671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATT	-2	True	NA	-9	True	ATTAAA	-15	NA	500722	319360	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_320065_321661_321808_331667_331778_333006_335231_346294_347342_348064_348164_357399_357523_480706_480758_500507
transcript_8628.known	chr1	+	1816	1	FSM	ENSG00000186603.7	ENST00000334815.6	1816	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATCTTCTCCTGTGCTTC	-2	True	NA	44	True	AATAAA	-36	NA	45326894	45328710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45326900_45328700
transcript_86290.known	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	17.8093608344975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	19	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_86296.known	chr18	-	1296	15	FSM	ENSG00000132199.20	ENST00000585128.6	1296	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	25.8642452755434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATTACTTGATTCTT	6150	False	NA	NA	False	NA	NA	NA	712523	674160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_706469_706579_712503
transcript_86302.known	chr18	-	1397	13	FSM	ENSG00000132199.20	ENST00000580982.5	1397	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	34.2226167906547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGCACCTAGACATTA	6058	False	NA	-56	True	NA	NA	NA	712615	674039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_693881_693909_694247_694335_706469_706579_712503
transcript_86306.known	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_3	49.5210392998101	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	-31	True	NA	104	True	ATTAAA	-19	NA	657652	673578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
transcript_86309.known	chr18	+	1327	6	FSM	ENSG00000176890.16	ENST00000323224.7	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	260.788496678822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCATTCGTCCACGC	5	False	NA	10	True	AATAAA	-5	NA	657742	673484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_657948_659640_659715_662145_662321_670691_670868_671379_671452_672859
transcript_86314.known	chr18	+	886	5	FSM	ENSG00000176890.16	ENST00000581920.1	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	269.503594595694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTCACAAGCTATTCC	883	False	NA	-70	True	NA	NA	NA	667720	673363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_667753_669071_669174_670691_670868_671379_671452_672859
transcript_86318.known	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	658340	649619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_649965_657841
transcript_86321.known	chr18	-	4605	12	FSM	ENSG00000176105.14	ENST00000314574.5	4605	12	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	41.3934957161546	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	22	True	NA	-1	True	ATTAAA	-22	NA	812242	721587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
transcript_86323.known	chr18	-	3684	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	15.7619002661481	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-28	True	NA	-4	True	ATTAAA	-22	NA	2571505	2537529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_8633.known	chr1	-	3071	11	FSM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_7	4.77493455452533	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-1	True	NA	-1	True	AATAAA	-17	NA	45491163	45343882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_86330.known	chr18	+	2126	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	34.6517834137004	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	7	True	NA	NA	False	AATAAA	-20	NA	2571556	2616635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
transcript_86331.nic	chr18	+	1725	14	ISM	ENSG00000080986.13	ENST00000261597.9	2126	17	-37	10133	-37	-8812	5prime_fragment	FALSE	canonical	3	304	junction_3	32.6369667345655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTAAGAACTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	2571519	2606502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414
transcript_86333.nic	chr18	+	1037	9	ISM	ENSG00000080986.13	ENST00000261597.9	2126	17	-37	27331	-37	6425	5prime_fragment	FALSE	canonical	3	304	junction_3	27.9013328534678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCGGTTAGTAAACATGT	NA	False	NA	NA	False	AAGAAA	-9	NA	2571519	2589304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203
transcript_86341.nic	chr18	+	1390	8	ISM	ENSG00000101596.17	ENST00000684915.1	3534	14	-285	12627	-92	-2615	5prime_fragment	FALSE	canonical	3	49	junction_1	11.7229932793878	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCTTTACTGCTGTGGT	359	False	NA	NA	False	NA	NA	NA	2655633	2694601	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2656262_2666156_2666233_2666869_2667032_2673280_2673364_2674014_2674146_2688393_2688509_2688627_2688748_2694526
transcript_86342.nic	chr18	+	1279	7	ISM	ENSG00000101596.17	ENST00000684915.1	3534	14	-285	18517	-92	-8505	5prime_fragment	FALSE	canonical	3	49	junction_1	11.0554159678513	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCAATATATAGTGGATA	359	False	NA	34	True	AATAAA	-1	NA	2655633	2688711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2656262_2666156_2666233_2666869_2667032_2673280_2673364_2674014_2674146_2688393_2688509_2688627
transcript_86343.nic	chr18	+	686	2	ISM	ENSG00000101596.17	ENST00000684915.1	3534	14	-285	41014	-92	-31002	5prime_fragment	FALSE	canonical	3	49	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTGATAATTTTGGT	359	False	NA	NA	False	AAGAAA	-34	NA	2655633	2666214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2656262_2666156
transcript_86344.known	chr18	+	775	4	FSM	ENSG00000132205.11	ENST00000583776.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGCGTGGCCCAGCTG	321	False	NA	NA	False	NA	NA	NA	2906568	2913162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_2907086_2908942_2908976_2909690_2909820_2913066
transcript_86346.known	chr18	-	6052	20	FSM	ENSG00000101577.10	ENST00000677752.1	6052	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_19	9.66961142143526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGCATTTGGCTCTTT	-9	True	NA	NA	False	AATAAA	-16	NA	3013144	2916998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_2920438_2920777_2920882_2921532_2921648_2922046_2922200_2923774_2923862_2924397_2924547_2925223_2925369_2926722_2926806_2927721_2927812_2928590_2928661_2929064_2929159_2931255_2931444_2934350_2934451_2937691_2938038_2939479_2939604_2940604_2940713_2951054_2951357_2954503_2954600_2960648_2960850_3013086
transcript_86348.nic	chr18	-	731	4	ISM	ENSG00000101577.10	ENST00000677752.1	6052	20	-196	34178	-196	3339	5prime_fragment	FALSE	canonical	3	32	junction_3	9.93310961716756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAAGGAGAAAGAAATACAA	11	False	3013351	-2	True	AAAAAG	-7	NA	3013340	2951176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_2951357_2954503_2954600_2960648_2960850_3013086
transcript_86349.known	chr18	+	1004	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1842.94804593076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	-9	True	NA	-11	True	AATATA	-40	NA	3247812	3256211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
transcript_86355.known	chr18	+	947	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1713.49979736082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	5	True	NA	5	True	ATTAAA	-7	NA	3247480	3256227	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
transcript_86357.known	chr18	+	958	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	3449	junction_1	180.691880159446	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTGTTTAAACTTCTT	-21	True	NA	14	True	ATTAAA	-16	NA	3247800	3256236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
transcript_86359.known	chr18	+	1163	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_2	84.2588603979163	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGCTTCTAGTCAGATG	-5	True	NA	NA	False	AGTAAA	-21	NA	3262132	3278461	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
transcript_8636.known	chr1	-	3019	10	FSM	ENSG00000070759.17	ENST00000486676.5	3019	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	15.3043203776653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCAGCCTTCTTACTT	1	True	NA	-2	True	AATAAA	-16	NA	45491161	45343883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45421724_45421847_45457563_45457872_45490851
transcript_86361.known	chr18	+	1025	4	FSM	ENSG00000118680.14	ENST00000400175.9	1025	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	979.424661046814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	36	False	NA	39	True	AATAAA	-28	NA	3262612	3278284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3262757_3272883_3273083_3277252_3277415_3277764
transcript_86362.known	chr18	+	1064	4	FSM	ENSG00000118680.14	ENST00000584539.1	1064	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1035.7956683954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	254	False	NA	39	True	AATAAA	-28	NA	3262955	3278284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3263139_3272883_3273083_3277252_3277415_3277764
transcript_86365.known	chr18	+	738	1	FSM	ENSG00000101608.13	ENST00000608786.1	738	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTCATGTTC	85	False	NA	15	True	AATAAA	-21	NA	3247906	3248644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247900_3248600
transcript_86366.known	chr18	+	1249	4	FSM	ENSG00000118680.14	ENST00000581193.5	1249	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1035.7956683954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	168	False	NA	39	True	AATAAA	-28	NA	3262416	3278284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3262785_3272883_3273083_3277252_3277415_3277764
transcript_86369.known	chr18	+	1585	4	FSM	ENSG00000177426.22	ENST00000407501.6	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	732.837559687608	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	39	False	NA	11	True	AATAAA	-23	NA	3449881	3458349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450071_3450321_3450506_3456353_3456581_3457364
transcript_8637.nnic	chr1	-	2922	10	NIC	ENSG00000070759.17	novel	3071	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	13.9452191019887	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCAGCCTTCTTACTT	0	True	NA	-2	True	AATAAA	-16	NA	45491162	45343883	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_86377.known	chr18	+	3030	3	FSM	ENSG00000177426.22	ENST00000618001.4	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	837	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	19	False	NA	NA	False	AATATA	-23	NA	3447608	3459978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3447798_3456353_3456581_3457364
transcript_86382.known	chr18	+	801	3	FSM	ENSG00000177426.22	ENST00000549780.5	801	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGGACCTCAACCAGGAC	29	False	NA	NA	False	AATACA	-35	NA	3448498	3457839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3448598_3456353_3456581_3457364
transcript_86386.known	chr18	+	563	3	FSM	ENSG00000177426.22	ENST00000549253.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGGGCCAAGATTTCTG	73	False	NA	NA	False	NA	NA	NA	3449412	3457456	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3449657_3456353_3456581_3457364
transcript_86388.known	chr18	+	1689	3	FSM	ENSG00000177426.22	ENST00000405385.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	852	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	22	False	NA	68	True	AATAAA	-12	NA	3449650	3458406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450071_3456353_3456581_3457364
transcript_86390.known	chr18	+	3175	3	FSM	ENSG00000177426.22	ENST00000343820.10	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_1	221.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	-3	True	NA	NA	False	AATATA	-23	NA	3450171	3459978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450506_3456353_3456581_3457364
transcript_86392.known	chr18	+	729	3	FSM	ENSG00000177426.22	ENST00000577543.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	564.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGGGATCAGTTTTGGC	37	False	NA	NA	False	NA	NA	NA	3450211	3457604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450506_3456353_3456581_3457396
transcript_86395.known	chr18	+	1980	3	FSM	ENSG00000177426.22	ENST00000330513.10	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	827	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTAATTCAGAGTATT	6	True	NA	73	True	AATAAA	-17	NA	3451676	3458411	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3452383_3456353_3456581_3457364
transcript_86399.known	chr18	+	1088	3	FSM	ENSG00000177426.22	ENST00000345133.9	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	862.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAACAAAGGGTTTT	-1	True	NA	-88	True	TATAAA	-11	NA	3451669	3458123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3451772_3456353_3456581_3457364
transcript_864.known	chr1	-	2114	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_8	42.5069387718052	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-3	True	NA	-15	True	AGTAAA	-15	NA	1324660	1311599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_86405.known	chr18	+	1089	2	FSM	ENSG00000177426.22	ENST00000551402.1	1089	2	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAAAGGTTTAAGTATG	2	True	NA	NA	False	NA	NA	NA	3450176	3457113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450506_3456353
transcript_86409.nic	chr18	-	3349	11	ISM	ENSG00000170579.17	ENST00000581527.5	3525	12	303976	-82	0	0	3prime_fragment	FALSE	canonical	3	27	junction_1	2.31516738055804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAACTTCCTTACACCCC	NA	False	NA	73	True	AATAAA	-35	NA	4151290	3502136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179
transcript_86410.known	chr18	-	3525	12	FSM	ENSG00000170579.17	ENST00000581527.5	3525	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2.94859540731397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGGAACTGCC	1	True	NA	-9	True	ATTAAA	-20	NA	4455266	3502218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
transcript_86414.known	chr18	-	1898	7	FSM	ENSG00000170579.17	ENST00000639615.1	1898	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.5277443105271	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAGACATGACTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4151290	3708463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_3708502_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179
transcript_86416.nic	chr18	-	2123	5	ISM	ENSG00000170579.17	ENST00000639615.1	1898	7	0	33367	0	-14122	5prime_fragment	FALSE	canonical	3	27	junction_1	2.44948974278318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGGCTTTTAAACAAGCA	NA	False	NA	NA	False	AAAAAG	-17	NA	4151290	3741830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179
transcript_86420.known	chr18	-	285	2	FSM	ENSG00000170579.17	ENST00000578250.6	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATTTCAAAGTAAAAGG	NA	False	NA	NA	False	ATTAAA	-34	NA	4151287	4005024	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_4005202_4151179
transcript_86421.known	chr18	+	501	4	FSM	ENSG00000177337.9	ENST00000573355.3	543	4	42	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	13.8884444373331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGGGTAGCTGGTTG	20	True	NA	21	True	AATAAA	-27	NA	3594111	3597385	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3594241_3594419_3594485_3596578_3596676_3597175
transcript_86422.known	chr18	+	1977	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	2	0	2	0	multi-exon	FALSE	canonical	3	29	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCTGTCTC	11	True	NA	NA	False	NA	NA	NA	3594102	3598352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3594241_3594419_3594485_3596578
transcript_86423.known	chr18	+	391	3	FSM	ENSG00000177337.9	ENST00000576606.6	398	3	0	7	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	20	True	NA	8	True	AATAAA	-14	NA	3594111	3597372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3594241_3594419_3594485_3597175
transcript_86424.known	chr18	+	408	3	FSM	ENSG00000177337.9	ENST00000574411.5	408	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	35	True	NA	8	True	AATAAA	-14	NA	3594126	3597372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3594241_3596578_3596676_3597175
transcript_86425.nnic	chr18	+	756	3	FSM	ENSG00000262001.2	ENST00000687483.1	736	3	-20	0	-19	0	multi-exon	FALSE	canonical	3	66	junction_2	174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	54	False	NA	8	True	AATAAA	-28	NA	3603908	3610094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553_3606641_3609732
transcript_86426.nnic	chr18	+	627	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-19	195	-19	-186	multi-exon	FALSE	canonical	3	179	junction_2	117.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGGCGTGGTGGCAC	54	False	NA	NA	False	AATACA	-5	NA	3603908	3609908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553_3606698_3609732
transcript_86427.nnic	chr18	+	813	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-19	9	-19	0	multi-exon	FALSE	canonical	3	179	junction_2	117.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	54	False	NA	8	True	AATAAA	-28	NA	3603908	3610094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553_3606698_3609732
transcript_86430.known	chr18	+	2261	2	FSM	ENSG00000262001.2	ENST00000572856.1	2261	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTCACACTGGGGAT	-2	True	NA	NA	False	NA	NA	NA	3603737	3608336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553
transcript_86435.known	chr18	+	4075	5	FSM	ENSG00000263753.9	ENST00000577439.2	4075	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	21.6967739537471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	124	False	NA	19	True	ATTAAA	-38	NA	5238779	5246508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240186_5240278_5240647_5241256_5241698_5241890_5243593
transcript_86447.known	chr18	+	1419	4	FSM	ENSG00000263753.9	ENST00000580684.6	1419	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.4994331000173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGGGCATGGTGGAAC	-27	True	NA	NA	False	ACTAAA	-11	NA	5238073	5243784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647_5240709_5241698_5241890_5243593
transcript_86452.known	chr18	+	837	4	FSM	ENSG00000263753.9	ENST00000653571.1	837	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.4994331000173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGGGCATGGTGGAAC	256	False	NA	NA	False	ACTAAA	-11	NA	5238911	5243784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647_5240965_5241698_5241890_5243593
transcript_86453.known	chr18	+	4548	4	FSM	ENSG00000263753.9	ENST00000665442.1	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATAGGTACTCAAAAC	19	True	NA	0	True	ATTAAA	-19	NA	5238119	5246489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647_5241256_5241698_5241813_5243593
transcript_86455.known	chr18	+	4669	4	FSM	ENSG00000263753.9	ENST00000656810.1	4669	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	20.8326666559997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTACTCAAAACTCATG	-20	True	NA	5	True	ATTAAA	-24	NA	5238080	5246494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647_5241256_5241698_5241890_5243593
transcript_86460.known	chr18	-	3528	4	FSM	ENSG00000198081.11	ENST00000357006.8	3528	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	49.7482551341139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTTTCATTTTTTCA	-16	True	NA	-2	True	TATAAA	-20	NA	5296040	5289018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295812
transcript_86461.known	chr18	-	825	4	FSM	ENSG00000198081.11	ENST00000582388.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	57.5750717662504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGAGACCCCAGAATC	5	True	NA	NA	False	NA	NA	NA	5295702	5291544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
transcript_86467.known	chr18	+	4017	3	FSM	ENSG00000263753.9	ENST00000582008.6	4017	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	-39	True	NA	19	True	ATTAAA	-38	NA	5238061	5246508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5241698_5241813_5243593
transcript_86471.known	chr18	+	4461	3	FSM	ENSG00000263753.9	ENST00000657250.1	4461	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTTTCAGCTACCTC	-39	True	NA	NA	False	NA	NA	NA	5238061	5246875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5241698_5241890_5243593
transcript_86476.known	chr18	+	2516	3	FSM	ENSG00000263753.9	ENST00000654155.1	2516	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTAAAGACAGTAAGAACA	-32	True	NA	-11	True	NA	NA	NA	5238068	5245170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5238894_5241698_5241813_5243593
transcript_86478.known	chr18	+	4199	3	FSM	ENSG00000263753.9	ENST00000666950.1	4199	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACATTGCAAATACAAAAAA	-20	True	NA	NA	False	ATTAAA	-29	NA	5238080	5246788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5238894_5241698_5241890_5243593
transcript_86480.known	chr18	+	4206	3	FSM	ENSG00000263753.9	ENST00000660030.2	4212	3	6	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGGTACTCAAAACTCA	-20	True	NA	3	True	ATTAAA	-22	NA	5238080	5246492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239197_5241698_5241890_5243593
transcript_86485.known	chr18	-	1814	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	40	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	707	False	NA	NA	False	NA	NA	NA	5296195	5290857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5292205_5293243_5293328_5295812
transcript_86490.known	chr18	-	1875	1	FSM	ENSG00000264575.1	ENST00000581067.1	1875	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTGTTTAAAACGCG	14	True	NA	50	True	AATAAA	-16	NA	5238598	5236723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5236700_5238600
transcript_86491.known	chr18	+	2034	1	FSM	ENSG00000263753.9	ENST00000581471.2	2034	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCCAGTTAGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	5237825	5239859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5237800_5239900
transcript_86493.known	chr18	-	3370	20	FSM	ENSG00000082397.18	ENST00000540638.6	3370	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	28.6372865828012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTAGGTAACCTTATAT	NA	False	NA	NA	False	ATTAAA	-19	NA	5544281	5393092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5393479_5394676_5394794_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
transcript_86496.nic	chr18	-	4033	19	NIC	ENSG00000082397.18	novel	4270	22	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	15.9443476574685	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTATGTTTAATAAT	NA	False	NA	-2	True	AATAAA	-25	NA	5544349	5392380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
transcript_86499.nic	chr18	-	3178	2	ISM	ENSG00000206432.4	ENST00000581347.2	10638	3	486	7348	486	765	3prime_fragment	FALSE	canonical	3	43	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAAACATAATATTGCC	46	False	NA	-11	True	AATAAA	-18	NA	5895469	5889419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_5892158_5895029
transcript_86500.known	chr18	-	867	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	20	False	NA	NA	False	NA	NA	NA	6463010	6462143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_6462100_6463000
transcript_86501.known	chr18	+	5858	18	FSM	ENSG00000088756.13	ENST00000383472.9	5858	18	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_16	11.7435103185579	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATGAGAATTCTTCT	3	True	NA	NA	False	AATAAA	-18	NA	6729715	6915716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_6729944_6824761_6824965_6837196_6837415_6851033_6851127_6859807_6859898_6868149_6868235_6870589_6870733_6873408_6873575_6873683_6873776_6876130_6876209_6882136_6882300_6887156_6887240_6889887_6890086_6890429_6890544_6894834_6894892_6896501_6896627_6908959_6909025_6912059
transcript_86504.nic	chr18	+	2483	17	NIC	ENSG00000088756.13	novel	5858	18	NA	NA	-63	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	31.6325954317694	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTGCAGAGAGACTCA	NA	False	NA	13	True	AATAAA	-15	NA	6729652	6898719	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_6729944_6824761_6824965_6837196_6837415_6851033_6851127_6859807_6859898_6868149_6868235_6870589_6870733_6873408_6873575_6873683_6873776_6876130_6876209_6882136_6882300_6887156_6887240_6889887_6890086_6890429_6890544_6894834_6894892_6896501_6896627_6898435
transcript_86510.known	chr18	-	491	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCACATTAACAGATACC	NA	False	NA	79	True	NA	NA	NA	6729862	6728820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_6729169_6729719
transcript_86511.known	chr18	-	545	4	FSM	ENSG00000265933.5	ENST00000578497.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGATTCATTTAGT	NA	False	NA	NA	False	AATACA	-43	NA	6929962	6927305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_6927585_6928119_6928220_6928850_6928969_6929914
transcript_86513.known	chr18	-	9642	63	FSM	ENSG00000101680.16	ENST00000389658.4	9642	63	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_41	64.8763431949394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAAGCCTTTTATTTCT	2	True	NA	-2	True	AATACA	-18	NA	7117797	6941741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
transcript_86516.nic	chr18	-	1930	11	ISM	ENSG00000101680.16	ENST00000389658.4	9642	63	-52	96830	-52	0	5prime_fragment	FALSE	canonical	3	195	junction_5	22.922478051031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTCTTGTTTCAATTTCT	NA	False	NA	2	True	AAAACA	-22	NA	7117849	7038571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
transcript_86522.known	chr18	-	818	2	FSM	ENSG00000265962.2	ENST00000579368.2	896	2	78	0	78	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTAAAATTATTGT	36	False	NA	NA	False	AATAAA	-15	NA	8707621	8695855	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_8696122_8707069
transcript_86525.nic	chr18	+	2322	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-611	31243	-58	469	5prime_fragment	FALSE	canonical	3	25	junction_3	24.225180597882	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAATACAA	NA	False	NA	NA	False	AATAAA	-33	NA	9136169	9254742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_86526.nic	chr18	+	2251	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-10	30713	-10	-839	5prime_fragment	FALSE	canonical	3	25	junction_3	24.225180597882	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAGGTGAAAAGGAAAAA	-39	True	NA	NA	False	CATAAA	-44	NA	9136770	9255272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_86531.nic	chr18	+	1328	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	5	160	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACCTGAAGCAGAAAAAA	-24	True	NA	NA	False	AAGAAA	-2	NA	9136785	9254433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_86532.nic	chr18	+	1649	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-7	469	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAATACAA	-36	True	NA	NA	False	AATAAA	-33	NA	9136773	9254742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_86533.nic	chr18	+	2176	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-4	-839	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAGGTGAAAAGGAAAAA	-33	True	NA	NA	False	CATAAA	-44	NA	9136776	9255272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_86534.nic	chr18	+	1770	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	3	469	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	25.4438156553226	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAATACAA	-26	True	NA	NA	False	AATAAA	-33	NA	9136783	9254742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9137097_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_86542.known	chr18	+	857	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	0	0	0	0	multi-exon	FALSE	canonical	3	3513	junction_2	236.182565151691	821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	-14	True	NA	24	True	AATAAA	-25	NA	9102698	9134341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
transcript_86548.known	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	25.810608284192	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	4	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
transcript_86551.known	chr18	+	4379	10	FSM	ENSG00000017797.13	ENST00000383432.8	4379	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_9	21.5240319321749	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	-22	True	NA	40	True	ATTAAA	-28	NA	9475512	9538114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9475692_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
transcript_86561.known	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	21	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	65	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9475692_9512990_9513290_9516844
transcript_86564.known	chr18	+	836	3	FSM	ENSG00000017797.13	ENST00000458039.3	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCAGCCGTTTTCCG	203	False	NA	NA	False	NA	NA	NA	9476126	9517221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9476287_9512990_9513290_9516844
transcript_86567.nic	chr18	+	425	2	ISM	ENSG00000017797.13	ENST00000609094.2	3676	3	-132	6938	25	205	5prime_fragment	FALSE	canonical	3	480	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAATTTAAGAAAAAGGA	3	True	NA	-1	True	AAGAAA	-4	NA	9475537	9513261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_9475692_9512990
transcript_86571.known	chr18	-	3885	20	FSM	ENSG00000154845.16	ENST00000400555.7	3885	20	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_18	29.3505888137174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTCTCTGGAATCT	-18	True	NA	-1	True	ATTAAA	-22	NA	9614569	9546790	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
transcript_86572.known	chr18	-	3923	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_18	33.4494284843251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTTTCTCTGGAA	-8	True	NA	-4	True	ATTAAA	-19	NA	9614559	9546793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
transcript_86575.known	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	21.505167337694	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	20	True	NA	21	True	AATAAA	-15	NA	9708300	9862551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_86579.known	chr18	+	783	6	FSM	ENSG00000168461.13	ENST00000578734.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	123.865087898084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCAGGAAATGTACCTG	-6	True	NA	NA	False	NA	NA	NA	9708274	9859469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9708445_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_86581.known	chr18	+	469	5	FSM	ENSG00000168461.13	ENST00000581109.1	469	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	140.036379201977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGCCAACCATGCAAGC	26	True	NA	NA	False	NA	NA	NA	9708306	9859286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9845581_9845692_9859227
transcript_86585.known	chr18	+	1227	7	FSM	ENSG00000101558.14	ENST00000340541.4	1227	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	655.293996784819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGGTTAGAAAACACAA	26	True	NA	NA	False	NA	NA	NA	9914061	9954358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9944923_9945059_9950394_9950569_9954052
transcript_86588.known	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_4	66.9525204902698	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	-20	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
transcript_86597.known	chr18	+	917	3	FSM	ENSG00000101558.14	ENST00000577901.5	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	45.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAATGAGCTGGGTAT	16	True	NA	NA	False	AAAACA	-38	NA	9914051	9936589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9914336_9931809_9931963_9936109
transcript_86602.known	chr18	+	3559	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	23.9669193502314	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGTTCTTTGTATTA	-1	True	NA	NA	False	AATAAA	-18	NA	10526026	10552764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_86609.nic	chr18	+	782	9	ISM	ENSG00000134265.13	ENST00000322897.11	3559	12	-161	6400	-39	-4156	5prime_fragment	FALSE	canonical	3	192	junction_3	23.5156198089695	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATAAGGAAATTGAGA	NA	False	NA	NA	False	AAGAAA	-5	NA	10525865	10546364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325
transcript_86611.known	chr18	+	887	8	FSM	ENSG00000134265.13	ENST00000582978.5	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	24.715524328995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGACAAATAGTGTCA	25	True	NA	NA	False	CATAAA	-24	NA	10526101	10540779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328
transcript_86612.known	chr18	+	1516	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	84.2086815050344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTATGAGTTTGAAAAA	4	True	NA	10	True	AATAAA	-20	NA	10525904	10550801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_86614.nic	chr18	-	1607	3	ISM	ENSG00000154864.14	ENST00000686869.1	7093	38	-927	266146	-3	-14	5prime_fragment	FALSE	canonical	3	41	junction_1	13.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACAATTTCTAACATGAT	-21	True	NA	NA	False	AGTAAA	-11	NA	11149572	10979197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_10979661_11066126_11066223_11148524
transcript_86620.nnic	chr18	+	4726	13	NNC	ENSG00000141404.17	novel	6227	12	NA	NA	-64	0	intron_retention	FALSE	canonical	0	0	junction_12	30.6923578979089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	8	True	NA	23	True	AATAAA	-23	NA	11689199	11885685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_11689940_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988_11882404_11883968
transcript_86621.known	chr18	+	1722	13	FSM	ENSG00000141404.17	ENST00000269162.9	1722	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	33.0810242687053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCCCTTTATTGATTC	6	True	NA	NA	False	NA	NA	NA	11751507	11881410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11751707_11752331_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_86626.known	chr18	+	6227	12	FSM	ENSG00000141404.17	ENST00000334049.11	6227	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	15.4170668550546	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	-15	True	NA	23	True	AATAAA	-23	NA	11689263	11885685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11689940_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_86629.known	chr18	+	6045	12	FSM	ENSG00000141404.17	ENST00000423027.8	6045	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	22.6879660096028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	5	True	NA	23	True	AATAAA	-23	NA	11752084	11885685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_86638.known	chr18	+	1038	8	FSM	ENSG00000141404.17	ENST00000602628.1	1038	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.8173672289039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTGACTGCCAGCCC	4811	False	NA	NA	False	NA	NA	NA	11857439	11881172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11857786_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_8664.known	chr1	-	1677	16	FSM	ENSG00000132781.20	ENST00000475516.5	1677	16	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	64.5422858803952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	338	False	NA	-4	True	AGTAAA	-20	NA	45340080	45329241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45339975
transcript_86642.known	chr18	+	3032	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	-4	True	NA	9	True	ATTAAA	-16	NA	11851412	11854444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11851400_11854400
transcript_8665.known	chr1	-	1742	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	66.2559347446618	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	30	True	NA	-4	True	AGTAAA	-20	NA	45340388	45329241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
transcript_86657.known	chr18	-	2427	12	FSM	ENSG00000154889.17	ENST00000496196.5	2427	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.0357771165633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGATGTGATGTGCAGA	-6	True	NA	NA	False	AATATA	-16	NA	11908317	11883689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11884628_11884878_11885044_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_86666.known	chr18	-	3330	11	FSM	ENSG00000154889.17	ENST00000588072.6	3330	11	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	14.9361976419703	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCTCCCAGGTTCAAG	-6	True	NA	NA	False	NA	NA	NA	11908317	11882621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_8667.known	chr1	-	1708	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	64.4780755158079	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	0	True	NA	-4	True	AGTAAA	-20	NA	45339970	45329241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
transcript_86670.known	chr18	-	1831	10	FSM	ENSG00000154889.17	ENST00000344987.11	1831	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	22.2660678562196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTTTCCCTCTTCCTGT	340	False	NA	-23	True	AATAAA	-6	NA	11908330	11884067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_86678.known	chr18	+	923	8	FSM	ENSG00000141401.12	ENST00000589238.5	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	341.215354823529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCGTGGCCCAC	11	False	NA	NA	False	NA	NA	NA	11981036	12030516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981131_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_8668.known	chr1	-	1776	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	0	0	0	multi-exon	FALSE	canonical	2	111	junction_15	46.4549483071741	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	5	True	NA	-4	True	AGTAAA	-20	NA	45340115	45329241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_86683.known	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_4	47.4956496396657	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	-5	True	NA	31	True	AATAAA	-14	NA	11981506	12030877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_86684.known	chr18	+	1616	8	FSM	ENSG00000141401.12	ENST00000590107.5	1616	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	349.41052400538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGCCCTGTGTGTAT	-4	True	NA	22	True	AATAAA	-5	NA	11981464	12030868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012350_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_8669.known	chr1	-	1888	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	0	0	0	multi-exon	FALSE	canonical	2	95	junction_15	48.9750957120045	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	NA	False	NA	-4	True	AGTAAA	-20	NA	45340470	45329241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_86691.nic	chr18	+	2228	7	NIC	ENSG00000141401.12	novel	1449	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	906	junction_4	49.3043270582478	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	392	False	NA	31	True	AATAAA	-14	NA	11981417	12030877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028994_12030342
transcript_86694.known	chr18	+	895	7	FSM	ENSG00000141401.12	ENST00000590138.1	895	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	365.813097390214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCCCAAGGCCTCCC	59	False	NA	NA	False	NA	NA	NA	11981610	12030473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_8670.known	chr1	-	1662	16	FSM	ENSG00000132781.20	ENST00000528013.6	1662	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	81.5024471343584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAAGCCCCCATT	472	False	NA	-68	True	NA	NA	NA	45339946	45329305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333604_45334390_45334512_45339898
transcript_86701.nic	chr18	+	2182	6	NIC	ENSG00000141401.12	novel	1449	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	19	junction_3	396.146942434244	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	392	False	NA	31	True	AATAAA	-14	NA	11981417	12030877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_11981766_11999053_11999188_12009882_12009988_12014264_12014374_12028042_12028994_12030342
transcript_86707.known	chr18	+	1008	5	FSM	ENSG00000176194.18	ENST00000320477.10	1008	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGACACTTCCTGTG	0	True	NA	NA	False	AATAAA	-24	NA	12254360	12277595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12254422_12262824_12262970_12264306_12264454_12274092_12274275_12277122
transcript_8671.nic	chr1	-	1855	16	NIC	ENSG00000132781.20	novel	1776	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_14	64.9244347085304	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTTGTATTTTTTT	256	False	NA	-5	True	AGTAAA	-19	NA	45340162	45329242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45339975
transcript_86710.known	chr18	-	3160	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	0	0	0	multi-exon	TRUE	canonical	3	591	junction_15	55.9637159238019	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCCCTATTTATGC	5	True	NA	-1	True	AATAAA	-29	NA	12377227	12328943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
transcript_8672.known	chr1	-	1891	16	FSM	ENSG00000132781.20	ENST00000672818.3	1891	16	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_14	66.6261210037024	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-22	True	NA	-4	True	AGTAAA	-20	NA	45340440	45329241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45340218
transcript_86730.known	chr18	+	524	5	FSM	ENSG00000176014.13	ENST00000590693.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	298.453828087361	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAGCTCACGCACT	426	False	NA	NA	False	NA	NA	NA	12307668	12325181	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12307770_12308261_12308350_12308686_12308796_12310942_12311054_12325066
transcript_86733.known	chr18	+	788	4	FSM	ENSG00000176014.13	ENST00000586653.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	327.591547849181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACCGCATCATGAACACC	-3	True	NA	NA	False	NA	NA	NA	12308240	12325267	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12324808
transcript_86734.known	chr18	+	1879	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	53.160135440008	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	-3	True	NA	33	True	CATAAA	-26	NA	12308240	12326616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
transcript_86735.known	chr18	+	1017	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	307.086307086461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	-10	True	NA	15	True	ATTAAA	-18	NA	12308233	12329826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
transcript_86737.known	chr18	+	408	3	FSM	ENSG00000176014.13	ENST00000587204.1	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	58.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTCATAGAAAAAGTGTGA	0	True	NA	NA	False	TTTAAA	-35	NA	12308243	12311135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942
transcript_86738.known	chr18	+	1075	3	FSM	ENSG00000176014.13	ENST00000590103.5	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	360	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTCAAGCGCATCTC	160	False	NA	NA	False	NA	NA	NA	12308231	12325914	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12325066
transcript_86740.known	chr18	+	485	3	FSM	ENSG00000176014.13	ENST00000591463.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	324.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCAGCTGGTGGAGAA	19	False	NA	NA	False	NA	NA	NA	12308262	12325353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12310942_12311054_12325066
transcript_86741.nic	chr18	-	507	3	ISM	ENSG00000141385.12	ENST00000269143.8	3160	17	-107	41942	-107	-12081	5prime_fragment	FALSE	canonical	3	591	junction_1	93	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGTGAACCTAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	12377334	12370885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_12370927_12371591_12371692_12376968
transcript_86745.known	chr18	+	2163	3	FSM	ENSG00000176014.13	ENST00000417736.2	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	4.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCTCTCTAGCCATG	-3	True	NA	8	True	AATAAA	-15	NA	12308240	12326563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308796_12310942_12311054_12325066
transcript_86758.known	chr18	+	1684	7	FSM	ENSG00000141391.14	ENST00000440960.6	1684	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	9.67815409397198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCGTTTCGTGTCTGTC	-11	True	NA	NA	False	ATTAAA	-22	NA	12407928	12432234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12408008_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_86759.nic	chr18	+	1689	7	NIC	ENSG00000141391.14	novel	2001	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	10.5777544350816	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	12419867	12432238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_12419948_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_86760.nic	chr18	+	1855	7	NIC	ENSG00000141391.14	novel	2001	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	10.8230720633695	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	12419902	12432238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_12420149_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_86761.known	chr18	+	777	6	FSM	ENSG00000141391.14	ENST00000590956.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.212115651931	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCGCCCCCGCCCGCCCG	NA	False	NA	NA	False	NA	NA	NA	12407895	12431463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12408008_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_86762.nic	chr18	+	1798	6	NIC	ENSG00000141391.14	novel	2001	6	NA	NA	-24	0	intron_retention	FALSE	canonical	2	10	junction_1	11.5134703716994	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	12419867	12432238	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_12419948_12420324_12420494_12421539_12421630_12427040_12427324_12429349_12429437_12431149
transcript_86764.known	chr18	-	2895	12	FSM	ENSG00000101624.11	ENST00000262127.7	2895	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	13.1689592452595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGGTCAGAGGATT	0	True	NA	NA	False	GATAAA	-26	NA	12702723	12672624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12691358_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
transcript_86769.known	chr18	+	1070	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	19.5930826795808	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	6	True	NA	26	True	AATAAA	-19	NA	12703041	12725740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
transcript_86770.nic	chr18	-	1242	7	ISM	ENSG00000101624.11	ENST00000262127.7	2895	12	-8	18608	-8	0	5prime_fragment	FALSE	canonical	3	66	junction_1	15.4209453522005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATTTTGTAATATTCT	-8	True	NA	NA	False	AATAAA	-21	NA	12702731	12691232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
transcript_86771.known	chr18	+	1036	6	FSM	ENSG00000128789.21	ENST00000590217.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	21.3410402745508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTAGATTAATTATGC	-13	True	NA	NA	False	AAAAAG	-33	NA	12703022	12724868	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498
transcript_86772.nic	chr18	+	1321	5	ISM	ENSG00000128789.21	ENST00000590217.5	1036	6	-143	3673	-143	-3325	5prime_fragment	FALSE	canonical	3	494	junction_3	15.5322245670091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTACAAAACTGGTAC	1219	False	NA	NA	False	AAAAAG	-13	NA	12702879	12721195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509
transcript_86773.known	chr18	+	711	5	FSM	ENSG00000128789.21	ENST00000586587.1	711	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	221.696160318577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTAAGGGTCTCTTTGCC	-10	True	NA	-1	True	AGTAAA	-14	NA	12703025	12725658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12724498_12724620_12725438
transcript_86775.known	chr18	+	471	2	FSM	ENSG00000128789.21	ENST00000400514.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGATTCATTTGTAACATT	-1	True	NA	NA	False	TATAAA	-39	NA	12658192	12658893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12658344_12658573
transcript_86778.known	chr18	-	1648	11	FSM	ENSG00000175354.20	ENST00000591115.5	1648	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_6	184.020216280712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	-13	True	NA	-4	True	ATTAAA	-16	NA	12884214	12785480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12819213_12819283_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_86781.known	chr18	-	1706	10	FSM	ENSG00000175354.20	ENST00000327283.7	1706	10	0	0	0	0	multi-exon	TRUE	canonical	1	143	junction_7	103.454528688564	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	179	False	NA	-1	True	ATTAAA	-19	NA	12884338	12785477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_86784.known	chr18	-	3470	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	0	0	0	0	multi-exon	FALSE	canonical	1	143	junction_6	108.952326156902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTGTCCTGATTCA	280	False	12884263	-3	True	ATTAAA	-17	NA	12884237	12792151	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_86798.known	chr18	+	3494	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_6	63.944189532748	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTTTTTGGTCTTTT	7	False	NA	27	True	AATAAA	-32	NA	12947994	12987536	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_86801.known	chr18	+	1851	9	FSM	ENSG00000085415.16	ENST00000399892.7	1851	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	263.264956840063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTGGACTTTTTGGT	-19	True	NA	22	True	AATAAA	-27	NA	12948010	12987531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12986861
transcript_86804.nic	chr18	+	1173	9	ISM	ENSG00000101639.19	ENST00000589596.5	3793	18	-74	40139	-74	10544	5prime_fragment	FALSE	canonical	3	31	junction_6	5.87367006223537	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGGGTATTGTTCCAG	-1	True	NA	NA	False	AATAGA	-4	NA	12991287	13019175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081
transcript_86811.known	chr18	+	2357	6	FSM	ENSG00000168675.19	ENST00000679167.1	2357	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.49909083394701	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATGCAAGGTGGTT	10	True	NA	-9	True	AATAAA	-3	NA	13218224	13646721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13218272_13278104_13278189_13387340_13387763_13621116_13621272_13643358_13643413_13645126
transcript_86814.known	chr18	+	6236	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	33.7607038428843	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	-10	True	NA	29	True	AATAAA	-20	NA	13726672	13764556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_86816.known	chr18	+	4108	12	FSM	ENSG00000101654.18	ENST00000592764.5	4108	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	43.2400564215502	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	21	True	NA	29	True	AATAAA	-20	NA	13726703	13764556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
transcript_86817.known	chr18	+	1849	11	FSM	ENSG00000101654.18	ENST00000543302.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	26.0785352349399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCCACAGTGTTCAGA	-23	True	NA	9	True	CATAAA	-31	NA	13726659	13760285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_86833.known	chr18	-	1091	4	FSM	ENSG00000177150.13	ENST00000592976.5	1091	4	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	6.94422221866655	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGAATAAGGTGCC	-31	True	NA	70	True	AAAAAG	-13	NA	13726586	13666493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
transcript_86843.nic	chr18	+	555	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-23	32735	-10	0	5prime_fragment	FALSE	canonical	3	58	junction_1	11	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	-33	True	NA	16	True	AAAAAG	-25	NA	13726649	13731821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_86844.known	chr18	-	1389	3	FSM	ENSG00000177150.13	ENST00000588475.1	1389	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	83	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTCTTTCTATAAAA	50	False	NA	NA	False	NA	NA	NA	13726505	13666002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_13666714_13681604_13682106_13726328
transcript_86846.nic	chr18	+	427	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	4	28449	-3	15	5prime_fragment	FALSE	canonical	3	82	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTGAGGATGTTCCA	-19	True	NA	31	True	AAAAAG	-40	NA	13726663	13731836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13731475
transcript_86847.known	chr18	+	1723	2	FSM	ENSG00000176136.6	ENST00000589410.2	1723	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTACTTCTGTCAATCAT	NA	False	NA	NA	False	NA	NA	NA	13824148	13827323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13824275_13825726
transcript_86854.known	chr18	-	558	5	FSM	ENSG00000175322.12	ENST00000592049.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7.03562363973514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGGGAGATGATGTCACA	-2	True	NA	NA	False	NA	NA	NA	14132434	14077505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14077527_14078199_14078299_14080188_14080267_14084876_14085077_14132274
transcript_86858.known	chr18	-	2117	3	FSM	ENSG00000175322.12	ENST00000589498.5	2117	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	4	True	NA	-11	True	AATAAA	-26	NA	14132428	14099937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14101774_14124349_14124477_14132274
transcript_86859.known	chr18	-	599	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATGAATGTGAAAAAGT	NA	False	NA	53	True	AGTAAA	-37	NA	14132457	14105993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14106410_14132274
transcript_86861.known	chr18	-	589	2	FSM	ENSG00000175322.12	ENST00000591987.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCACCACGTCTGGCT	0	True	NA	NA	False	NA	NA	NA	14132432	14124045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14124477_14132274
transcript_86862.nic	chr18	-	3602	22	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-880	30000	-87	-9994	5prime_fragment	TRUE	canonical	3	112	junction_21	21.5696940330704	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAGAAAATTTAAAGAAAA	NA	False	NA	NA	False	TATAAA	-42	NA	21111900	20979951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_20980005_20982762_20982833_20984350_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_86865.nic	chr18	-	3133	18	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-880	41224	-87	-21218	5prime_fragment	FALSE	canonical	3	112	junction_17	21.3432971253256	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTCAGTTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	21111900	20991175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_86868.nic	chr18	-	2981	17	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-880	42880	-87	-22874	5prime_fragment	FALSE	canonical	3	112	junction_16	20.8198185330708	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAATGATTTAACATATA	NA	False	NA	-2	True	AAGAAA	-34	NA	21111900	20992831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_86870.nic	chr18	-	2507	14	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-880	58136	-87	36957	5prime_fragment	FALSE	canonical	3	112	junction_13	16.8484367964867	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAGAGAAGAAATGTAG	NA	False	NA	NA	False	AAGAAA	-16	NA	21111900	21008087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_86873.nic	chr18	-	1827	5	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-880	95093	-87	0	5prime_fragment	FALSE	canonical	3	112	junction_4	16.0682139642214	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21111900	21045044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_86876.known	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	203	junction_6	30.4972563459092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-26	True	NA	-45	True	AATAAA	-42	NA	21600704	21529283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_86878.nic	chr18	-	2312	4	ISM	ENSG00000141446.11	ENST00000269214.10	4488	12	-43	44197	-43	19562	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAATTAATTCTGAA	-12	True	NA	NA	False	AATATA	-20	NA	21600747	21573480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_86880.nic	chr18	-	1467	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-78	45238	-78	18502	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCTCAGAAAAAATTAGT	53	False	NA	NA	False	AAAAAG	-4	NA	21600962	21574540	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_86882.nic	chr18	-	1158	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	42	45427	42	18313	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCCAAAGGAGACTAT	173	False	NA	NA	False	NA	NA	NA	21600842	21574729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_86883.nic	chr18	-	923	4	ISM	ENSG00000141446.11	ENST00000269214.10	4488	12	-31	45574	-31	18185	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTACTCAGGAATGATG	0	True	NA	NA	False	AAGAAA	-1	NA	21600735	21574857	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_86885.nic	chr18	-	600	4	ISM	ENSG00000141446.11	ENST00000269214.10	4488	12	-35	45901	-35	17858	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAAAAAATTAACAAA	-4	True	NA	NA	False	GATAAA	-39	NA	21600739	21575184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_86888.known	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	4976	junction_3	306.235566553303	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	-12	True	NA	4	True	AATAAA	-14	NA	21612313	21633520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
transcript_86890.known	chr18	+	320	4	FSM	ENSG00000167088.11	ENST00000579618.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	2303.1648274108	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGAAGAGGGGGTCCT	-12	True	NA	-43	True	NA	NA	NA	21612313	21629109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_21612444_21622724_21622802_21623874_21623940_21629061
transcript_86898.known	chr18	-	2029	9	FSM	ENSG00000158201.10	ENST00000289119.7	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	9.50575483588757	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTTTGTGAGTTTTT	16	True	NA	-6	True	AATAAA	-16	NA	21704774	21650900	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21664117_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
transcript_86902.known	chr18	-	1836	7	FSM	ENSG00000158201.10	ENST00000580981.5	1836	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	25.475478405714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAAATAAATTCTACCA	23	True	NA	-33	True	TTTAAA	-31	NA	21704767	21650927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21702315_21702499_21703583_21703748_21704503
transcript_86903.nic	chr18	-	982	5	ISM	ENSG00000158201.10	ENST00000289119.7	2029	9	-82	13094	-76	-145	5prime_fragment	FALSE	canonical	3	73	junction_4	6.49519052838329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTAAATGCGGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	21704856	21663994	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
transcript_86905.known	chr18	-	1664	3	FSM	ENSG00000158201.10	ENST00000579982.1	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGGACTCCAGCCTG	10	True	NA	NA	False	NA	NA	NA	21704780	21701275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21702499_21703583_21703748_21704503
transcript_86909.known	chr18	+	3624	7	FSM	ENSG00000141448.11	ENST00000269216.10	3624	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	41.3860550856874	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCTGAGTGTACAGTAT	0	True	NA	31	True	AATACA	-22	NA	22169588	22202528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22169683_22171107_22172280_22176954_22177122_22181452_22181579_22182756_22182845_22182939_22183044_22200655
transcript_8691.known	chr1	-	2209	15	FSM	ENSG00000132781.20	ENST00000672011.1	2209	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	73.3284475799795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAAAGTGCTTATTTT	NA	False	NA	-32	True	NA	NA	NA	45340893	45329269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_86911.known	chr18	-	839	4	FSM	ENSG00000266010.3	ENST00000579431.3	980	4	116	25	-6	-2	multi-exon	FALSE	canonical	3	25	junction_2	8.60232526704263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	3720	False	NA	-28	True	AATAAA	-14	NA	22168437	22166915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_22167309_22167603_22167804_22168043_22168163_22168310
transcript_86912.known	chr18	-	432	4	FSM	ENSG00000266010.3	ENST00000649729.2	835	4	21	382	-14	123	multi-exon	FALSE	canonical	0	0	junction_2	19.4821855949366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCTGGACACTCGATAC	5	True	NA	NA	False	NA	NA	NA	22168445	22167288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_22167309_22167603_22167804_22168085_22168163_22168310
transcript_86921.known	chr18	-	1788	2	FSM	ENSG00000266010.3	ENST00000583490.1	1788	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGGCTGCCTGACGT	3189	False	NA	-10	True	AATAAA	-32	NA	22168968	22166897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_22168384_22168666
transcript_86924.known	chr18	+	3275	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	32.7157605391396	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-3	True	NA	15	True	AATACA	-16	NA	22933327	23026486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_86930.known	chr18	+	3293	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	56.3875478767747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	-32	True	NA	17	True	AATACA	-18	NA	22933825	23026488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_86931.nic	chr18	+	2474	14	ISM	ENSG00000101773.19	ENST00000327155.10	3275	19	4	28752	4	4165	5prime_fragment	FALSE	canonical	3	209	junction_1	33.1851538774468	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGATCTGTTTTTGTTTT	1	True	NA	32	True	AAAAAG	-6	NA	22933331	22997734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619
transcript_86932.known	chr18	+	3260	18	FSM	ENSG00000101773.19	ENST00000399725.6	3260	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.5251034514438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-17	True	NA	15	True	AATACA	-16	NA	22933840	23026486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23022128_23022271_23026142
transcript_86934.nic	chr18	+	2077	11	ISM	ENSG00000101773.19	ENST00000327155.10	3275	19	0	32917	0	0	5prime_fragment	FALSE	canonical	3	209	junction_1	28.5098228686185	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTTAAAATTCCTC	-3	True	NA	NA	False	AATAAA	-45	NA	22933327	22993569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747
transcript_86938.known	chr18	+	2229	11	FSM	ENSG00000101773.19	ENST00000399721.6	2229	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	79.4763486831145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTTAAAATTCCTC	18	True	NA	NA	False	AATAAA	-45	NA	22933875	22993569	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22934265_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747
transcript_86941.known	chr18	+	5283	10	FSM	ENSG00000134508.13	ENST00000256925.12	5283	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	13.7436854187255	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGTTCTTTATCTC	-1	True	NA	16	True	AATAAA	-17	NA	23135484	23260470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23136608_23188837_23188910_23194447_23194541_23213976_23214055_23234607_23234705_23235894_23236052_23237141_23237246_23252959_23253067_23253728_23253937_23257226
transcript_86944.known	chr18	-	1022	16	FSM	ENSG00000134490.14	ENST00000542162.5	1022	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	33.7599368087876	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGACGGTCAAGAGAAA	76	False	NA	NA	False	NA	NA	NA	23437869	23298007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23376826_23376942_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_86946.known	chr18	-	2994	15	FSM	ENSG00000134490.14	ENST00000383233.8	2994	15	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_7	21.2219803265292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACTTGTTTCTGAACC	-16	True	NA	-24	True	AATAAA	-16	NA	23437961	23296012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_86953.known	chr18	-	2941	14	FSM	ENSG00000134490.14	ENST00000473688.5	2941	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	24.8843478763412	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTCACTTGTTTCTG	-16	True	NA	-28	True	AATAAA	-12	NA	23437961	23296016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_86963.known	chr18	-	889	12	FSM	ENSG00000134490.14	ENST00000460322.5	889	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	38.7797339933507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACAGTGAGGCCAGGTG	-1	True	NA	NA	False	NA	NA	NA	23437946	23297893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23373711_23373764_23377645_23377672_23384989_23385068_23430630_23430678_23437780
transcript_86972.known	chr18	+	3574	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_5	14.1074743782625	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	-20	True	NA	19	True	ATTAAA	-21	NA	23453286	23483140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_86980.known	chr18	+	1904	13	FSM	ENSG00000101782.15	ENST00000577501.5	1904	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	36.7181456806062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAACAGCTATAGGTT	1	True	NA	34	True	AATAAA	-39	NA	23453307	23481500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479325_23479425_23481171
transcript_86981.known	chr18	-	4760	25	FSM	ENSG00000141458.13	ENST00000269228.10	4760	25	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_10	16.782100252617	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCTAACCTGTCCTTA	-38	True	NA	41	True	AATACA	-19	NA	23586506	23531441	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23548005_23548109_23551626_23551728_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
transcript_8700.nnic	chr1	-	1815	15	NIC	ENSG00000132781.20	novel	1891	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_10	72.776180505572	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTTGTATTTTTTT	-22	True	NA	-5	True	AGTAAA	-19	NA	45340440	45329242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_87001.known	chr18	+	2200	20	FSM	ENSG00000141452.10	ENST00000269221.8	2200	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	88	junction_3	11.9833679753749	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTATAGAACTTGTGGG	1	True	NA	NA	False	TATAAA	-42	NA	23503510	23531822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_87003.nic	chr18	+	2088	20	NIC	ENSG00000141452.10	novel	2200	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	non_canonical	3	13	junction_18	24.5014556636925	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATAAAGTGTATCTACA	NA	False	NA	NA	False	AATAAA	-19	NA	23503458	23531782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530510_23530613_23531624
transcript_87007.nic	chr18	+	2127	19	NIC	ENSG00000141452.10	novel	2200	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	non_canonical	3	7	junction_2	25.9807621135332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATAAAGTGTATCTACA	NA	False	NA	NA	False	AATAAA	-19	NA	23503458	23531782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_23503721_23504370_23504448_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_87015.known	chr18	+	2102	20	FSM	ENSG00000141452.10	ENST00000590870.5	2102	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	26.9662762613169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTATTGCATTAATAA	23	True	NA	NA	False	TATAAA	-14	NA	23503532	23531743	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524159_23524409_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_87016.known	chr18	-	846	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTTTTCCTGAAAACA	-2	True	NA	-35	True	AATAAA	-15	NA	23662772	23648410	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23649194_23662709
transcript_87023.nnic	chr18	+	2451	15	NNC	ENSG00000168234.13	novel	4896	14	NA	NA	-247	135	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.5030393171363	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGTGAAGATGGGCTT	NA	False	NA	8	True	AATAAA	-14	NA	24014172	24132644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_24014340_24014409_24015039_24064139_24064189_24066011_24066141_24069156_24069272_24080584_24080940_24082912_24083082_24114553_24114648_24118124_24118233_24123833_24123944_24125426_24125551_24128885_24128984_24130312_24130418_24131881_24131921_24132484
transcript_87026.known	chr18	+	4896	14	FSM	ENSG00000168234.13	ENST00000317571.8	4896	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	8.44473856714674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCTATGTGTGCTTC	-21	True	NA	14	True	AAGAAA	-22	NA	24014753	24135600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24069156_24069272_24080584_24080940_24082912_24083082_24114553_24114648_24118124_24118233_24123833_24123944_24125426_24125551_24128885_24128984_24130312_24130418_24131881_24131921_24132484
transcript_87034.known	chr18	+	1048	2	FSM	ENSG00000168234.13	ENST00000584250.1	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGAGATTCCTTTT	-1	True	NA	6	True	ATTAAA	-18	NA	24014419	24020288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24015039_24019859
transcript_87035.known	chr18	+	533	2	FSM	ENSG00000168234.13	ENST00000577185.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGCTTGAGATTCCT	1859	False	NA	3	True	ATTAAA	-15	NA	24016633	24020285	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24016741_24019859
transcript_87037.known	chr18	-	4152	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_17	127.871849429588	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	-4	True	NA	-8	True	AATAAA	-16	NA	24397824	24162051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_87052.nic	chr18	-	2634	24	ISM	ENSG00000141447.19	ENST00000319481.8	4152	28	-84	8315	-28	1113	5prime_fragment	FALSE	canonical	3	113	junction_13	118.292131417891	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGATAAGAAAAATACAGAAG	NA	False	NA	NA	False	NA	NA	NA	24397908	24170366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_87064.known	chr18	-	3317	14	FSM	ENSG00000141447.19	ENST00000399443.7	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_13	49.0989822620754	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	-22	True	NA	-1	True	AATAAA	-23	NA	24272232	24162044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
transcript_87085.known	chr18	-	588	5	FSM	ENSG00000141447.19	ENST00000582350.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	117.178016282919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATATTGGCCAGACTG	36	True	NA	NA	False	NA	NA	NA	24397784	24347664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24347839_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_87086.known	chr18	-	1887	5	FSM	ENSG00000141447.19	ENST00000399441.4	1887	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	102.942945362953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	32	True	NA	-13	True	AATAAA	-15	NA	24397788	24357124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397572
transcript_87087.nic	chr18	-	1925	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	79.6821811950451	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	24397908	24357124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_87089.nnic	chr18	-	1883	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	125.707000600603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	24397908	24357124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_24358512_24366891_24366967_24368545_24368590_24377412_24377536_24397654
transcript_87092.known	chr18	-	1002	5	FSM	ENSG00000141447.19	ENST00000582618.1	1002	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	137.784251640019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCTCCAGGGAGGGTAG	-21	True	NA	NA	False	NA	NA	NA	24397841	24366404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24366967_24368286_24368373_24368545_24368590_24377412_24377536_24397654
transcript_87100.known	chr18	+	1305	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	10.0717426496113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	0	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
transcript_87101.known	chr18	+	2226	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	17.0105849399719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	33	False	NA	23	True	AATAAA	-13	NA	24139094	24161597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
transcript_87105.known	chr18	+	3734	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	24.0590939147758	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	3	True	NA	31	True	AATAAA	-20	NA	24426669	24453531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
transcript_87110.known	chr18	-	4887	8	FSM	ENSG00000198795.11	ENST00000361524.8	4887	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	13.7306450046929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTATTTGTGTGTT	-5	True	NA	-1	True	AATAAA	-18	NA	25352166	25061923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_25062742_25089464_25089581_25091949_25092082_25195159_25195245_25224344_25227698_25322007_25322188_25350906_25350948_25352004
transcript_87115.known	chr18	-	3402	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_3	240.498669434989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-2	True	NA	-22	True	AATAAA	-17	NA	26090613	26016252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_87119.known	chr18	-	1836	10	FSM	ENSG00000141380.14	ENST00000269137.11	1836	10	0	0	0	0	multi-exon	TRUE	canonical	3	511	junction_3	68.7509371428833	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTAATACTTTTCCAC	299	False	NA	NA	False	NA	NA	NA	26090901	26018013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_87121.known	chr18	-	559	1	FSM	ENSG00000188985.6	ENST00000579682.1	559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGAAGGTGTTTTCTA	68	False	NA	NA	False	NA	NA	NA	26171284	26170725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26170700_26171300
transcript_87122.known	chr18	+	4751	15	FSM	ENSG00000141384.13	ENST00000269142.10	4751	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	6.1145527311522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGCTCATTCACTGA	5	True	NA	NA	False	ATTAAA	-22	NA	26226444	26391685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_26227277_26265169_26265316_26267515_26267624_26274662_26274825_26274930_26275054_26281970_26282061_26285881_26286500_26292245_26292382_26293425_26293532_26315228_26315399_26321069_26321201_26327014_26327141_26335174_26335232_26357689_26357795_26389844
transcript_87131.nic	chr18	+	2357	9	ISM	ENSG00000141384.13	ENST00000269142.10	4751	15	-59	98177	-59	-96656	5prime_fragment	FALSE	canonical	3	100	junction_1	6.58478359553296	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGTAACATCATGCTT	NA	False	NA	NA	False	AATAAA	-2	NA	26226385	26293508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_26227277_26265169_26265316_26267515_26267624_26274662_26274825_26274930_26275054_26281970_26282061_26285881_26286500_26292245_26292382_26293425
transcript_87132.known	chr18	-	3448	5	FSM	ENSG00000134504.14	ENST00000580059.7	3448	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_4	9.86154146165801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCGTGTTGAGCATCAA	8	True	NA	3	True	ATTAAA	-23	NA	26548553	26454909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26546727
transcript_87134.known	chr18	-	2103	5	FSM	ENSG00000134504.14	ENST00000408011.7	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	9.52299847737046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTGTGAAACACACAT	4	True	NA	-61	True	AATAAA	-18	NA	26549435	26454973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26548890
transcript_87135.known	chr18	-	814	5	FSM	ENSG00000134504.14	ENST00000580191.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.0208152801713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCTCTGGACTAAATG	-13	True	NA	NA	False	GATAAA	-3	NA	26657401	26455759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26657359
transcript_87148.known	chr18	-	11379	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	73.053405122554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCCTGTGCATATTTC	-9	True	NA	-5	True	AATAAA	-23	NA	27185308	26906480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_87159.known	chr18	-	2033	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	121.520317231317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTGGACTTAGGCA	1	True	NA	-5	True	GATAAA	-13	NA	27185298	26915778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_87166.known	chr18	-	2043	5	FSM	ENSG00000154080.14	ENST00000581714.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	80.9826370279457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGGACTTAGGCATT	10	True	NA	-3	True	GATAAA	-15	NA	27143038	26915776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688
transcript_87167.nnic	chr18	-	3906	15	NNC	ENSG00000170558.10	novel	4016	16	NA	NA	-19589	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_14	215.937774483715	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	NA	False	NA	-11	True	AATAAA	-20	NA	28065185	27950965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28065015
transcript_87171.known	chr18	-	4016	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_11	59.2315981737976	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	-10	True	NA	-11	True	AATAAA	-20	NA	28177130	27950965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
transcript_87173.known	chr18	-	12377	17	FSM	ENSG00000134755.18	ENST00000251081.8	12377	17	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	62.709118904271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	10	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_31068213_31068298_31068345_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
transcript_87175.known	chr18	-	12331	16	FSM	ENSG00000134755.18	ENST00000280904.11	12331	16	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_13	32.0883502570983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	10	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_31068213_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
transcript_87180.nic	chr18	-	799	3	ISM	ENSG00000134755.18	ENST00000251081.8	12377	17	-24	33290	-24	-26132	5prime_fragment	FALSE	canonical	3	250	junction_1	8	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTGGAGCAT	-14	True	NA	NA	False	AAGAAA	-10	NA	31102445	31092129	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_31092301_31093558_31093644_31101902
transcript_87182.known	chr18	+	5697	15	FSM	ENSG00000046604.14	ENST00000261590.13	5697	15	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_11	68.8616255209515	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGGGGTACTTGGCAT	-35	True	NA	26	True	AATAAA	-29	NA	31498176	31549008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447_31524586_31524702_31524889_31530986_31531253_31535269_31535413_31536201_31536430_31538750_31538979_31541192_31541315_31542519_31542853_31545720
transcript_87186.known	chr18	+	948	7	FSM	ENSG00000046604.14	ENST00000683654.1	948	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	274.886643303502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCATGTGTTTCTTT	32	True	NA	7	True	AATAAA	-17	NA	31498243	31522608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31522358
transcript_87190.known	chr18	-	6230	29	FSM	ENSG00000153339.15	ENST00000283351.10	6230	29	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_16	24.2487902075673	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCCTGAATATTACTC	-14	True	NA	-10	True	AATAAA	-20	NA	31943128	31829196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_31830990_31832083_31832174_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
transcript_87194.known	chr18	-	7033	6	FSM	ENSG00000141441.16	ENST00000399218.8	7033	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	8.56971411425142	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGCAGTTGTTCCT	432	False	NA	-1	True	AATAAA	-17	NA	32470484	32263521	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_32268766_32270216_32270384_32287030_32288204_32310192_32310324_32392894_32393036_32470307
transcript_87200.nnic	chr18	+	3521	9	NNC	ENSG00000134758.14	novel	3551	8	NA	NA	-21	-2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_8	185.478056316644	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGTGTCTAATTAAA	-37	True	NA	8	True	ATTAAA	-14	NA	32091852	32131559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118_32130977_32131025
transcript_87204.known	chr18	+	3551	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	76.3653944492383	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	-16	True	NA	10	True	ATTAAA	-16	NA	32091873	32131561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_87212.known	chr18	+	5573	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	14.0370937162933	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTACTATTTTACTC	-5	True	NA	45	True	ATTAAA	-31	NA	32018824	32073219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
transcript_87213.nic	chr18	+	2444	6	NIC	ENSG00000134758.14	novel	3551	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_2	203.609822945751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	-37	True	NA	13	True	AATAAA	-15	NA	32091852	32130715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_32092236_32092699_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_87219.known	chr18	-	1930	10	FSM	ENSG00000101746.16	ENST00000590712.5	1930	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.23560439523579	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCATAAAAGGCTATCTA	1713	False	NA	NA	False	CATAAA	-6	NA	34223205	33852588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_33853036_33883243_33883425_33943064_33943179_33958238_33958419_34019317_34019602_34093464_34093598_34104046_34104160_34105048_34105161_34129870_34130021_34222989
transcript_87220.known	chr18	+	5888	22	FSM	ENSG00000134769.23	ENST00000683379.1	5888	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	29.7721506173295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTGTTGGAA	23	True	NA	-63	True	NA	NA	NA	34493355	34891276	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34875238_34875399_34877718_34877809_34879550_34879720_34882068_34882202_34884727_34884777_34887765
transcript_87222.known	chr18	+	3353	22	FSM	ENSG00000134769.23	ENST00000684359.1	3353	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.994476868821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTTGGAACCTC	28	True	NA	-59	True	NA	NA	NA	34493360	34891280	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34875238_34875399_34877718_34877809_34879550_34879720_34882068_34882202_34884727_34884777_34890299
transcript_87228.known	chr18	+	2707	18	FSM	ENSG00000134769.23	ENST00000679936.1	2707	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.0695048198927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCATTACATACTTTTTT	-12	True	NA	NA	False	NA	NA	NA	34493388	34866861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34683481_34683695_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_87230.known	chr18	+	2671	17	FSM	ENSG00000134769.23	ENST00000598774.6	2671	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.0699424515677	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAATTAAA	-2	True	NA	NA	False	NA	NA	NA	34493330	34866980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_87236.known	chr18	+	1869	15	FSM	ENSG00000134769.23	ENST00000597599.5	1869	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.8172152712257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATGACATCTTTTAGAA	16	True	NA	NA	False	NA	NA	NA	34710296	34866347	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34710446_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_87237.known	chr18	+	1706	13	FSM	ENSG00000134769.23	ENST00000315456.10	1706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	36.8567045009001	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	-16	True	NA	13	True	AATAAA	-20	NA	34493316	34829328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34829040
transcript_87240.known	chr18	+	4212	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_4	19.6638416050035	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGGAGTTACAGATT	-10	True	NA	18	True	AATAAA	-21	NA	35041412	35143470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
transcript_87246.known	chr18	+	5259	4	FSM	ENSG00000186812.13	ENST00000330501.12	5259	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	9.93310961716756	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	-13	True	NA	14	True	ATTAAA	-18	NA	35241033	35249808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261
transcript_87249.nic	chr18	+	2753	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	10.3708994574027	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	-11	True	NA	NA	False	ACTAAA	-14	NA	35241035	35246723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_35241691_35242390_35242885_35243151_35243294_35245261
transcript_87251.known	chr18	-	4122	4	FSM	ENSG00000186814.14	ENST00000333206.10	4122	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	6.37704215656966	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	-8	True	NA	-5	True	AATAAA	-16	NA	35290229	35251061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35290083
transcript_87257.known	chr18	+	1516	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACAGTGTATTCAAT	-10	True	NA	5	True	ATTAAA	-17	NA	35241036	35244100	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35241110_35242390_35242885_35243151
transcript_87258.known	chr18	+	690	2	FSM	ENSG00000186812.13	ENST00000589630.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGCCATACTTGTCT	-17	True	NA	NA	False	GATAAA	-39	NA	35241029	35243000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35241110_35242390
transcript_87259.known	chr18	+	5124	3	FSM	ENSG00000257267.4	ENST00000399070.3	5124	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	38.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGGTTCCTGTTGAA	NA	False	NA	6	True	AATAAA	-17	NA	35290281	35310766	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35290392_35291009_35291233_35305975
transcript_87265.known	chr18	+	2191	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	42	0	12	0	multi-exon	FALSE	canonical	3	121	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCACC	23	False	NA	NA	False	NA	NA	NA	35290335	35308110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35290392_35305975
transcript_87269.known	chr18	-	6282	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	8.04155872120988	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	15	False	35344471	-20	True	AATAAA	-21	NA	35344456	35332226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
transcript_87270.nnic	chr18	-	1462	4	NNC	ENSG00000172466.16	novel	6256	4	NA	NA	-16006	3022	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	113.862490165404	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGCACTCAGGTCTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	35361488	35337212	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_-_35337771_35339828_35339977_35340230_35340734_35361235
transcript_87272.known	chr18	-	904	7	FSM	ENSG00000153391.16	ENST00000441607.6	904	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	121.652510591986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTAGTGTG	1	True	NA	-8	True	NA	NA	NA	35497943	35468462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385_35487440_35489331_35489386_35497718
transcript_87273.nnic	chr18	-	770	6	NIC	ENSG00000267140.1	novel	455	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	124.60112359044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTATGGTATTTT	55	False	35497983	-2	True	AATAAA	-17	NA	35497964	35443870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_35444023_35446874_35446956_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_87274.known	chr18	-	408	5	FSM	ENSG00000153391.16	ENST00000591139.1	408	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	105.47126385893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCACCATTGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	35487470	35468710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385
transcript_87275.known	chr18	-	943	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	18.7533330370897	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCCCTGAATTTTT	-16	True	NA	-4	True	AATAAA	-18	NA	35497960	35468332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_87278.known	chr18	-	455	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTATGGTATTTT	4	True	NA	-2	True	AATAAA	-17	NA	35497940	35443870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35444023_35446874_35446956_35497718
transcript_87279.known	chr18	-	595	2	FSM	ENSG00000153391.16	ENST00000590757.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAGTCCCTGAATTTT	115	False	NA	-5	True	AATAAA	-17	NA	35497904	35468333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35497718
transcript_87280.known	chr18	+	3970	12	FSM	ENSG00000141429.14	ENST00000269195.6	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	110.30970675765	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCCTTACATTGGTTT	0	True	NA	29	True	ATTAAA	-42	NA	35581739	35711834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35581863_35654559_35654802_35663627_35663803_35677590_35677758_35683390_35683599_35687015_35687187_35689172_35689291_35691011_35691193_35692180_35692321_35702896_35702996_35703508_35703644_35709623
transcript_87281.known	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	27.5590275590413	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	1	True	NA	14	True	TATAAA	-19	NA	35972678	35979278	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
transcript_87286.known	chr18	+	703	4	FSM	ENSG00000141428.17	ENST00000269194.10	703	4	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	124.408824267234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGATTCCAAAGGTGG	NA	False	NA	NA	False	ACTAAA	-25	NA	35972633	35978939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
transcript_87290.known	chr18	-	1945	9	FSM	ENSG00000141425.18	ENST00000590898.5	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	305.076937017533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	24	True	NA	-2	True	AATAAA	-25	NA	36067530	35989823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_87292.known	chr18	-	1850	8	FSM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	220.065852852815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-2	True	NA	-64	True	NA	NA	NA	36067556	35989885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_87293.known	chr18	-	1264	8	FSM	ENSG00000141425.18	ENST00000588737.5	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	291.551934674159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAACGAGTAATTTATA	-5	True	NA	NA	False	AAGAAA	-12	NA	36067559	35993039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_87297.known	chr18	-	4421	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	88.6655701686587	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-5	True	NA	-2	True	AATAAA	-25	NA	36067559	35989823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_87300.known	chr18	-	1022	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	255.899340019122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-3	True	NA	-32	True	AATAAA	-13	NA	36067557	36025598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_87304.nic	chr18	-	3565	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-38	34428	-18	575	5prime_fragment	FALSE	canonical	3	626	junction_5	60.2547923405267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCAGGTGTGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	36067594	36024313	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_87305.nic	chr18	-	2280	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-38	35713	-18	0	5prime_fragment	FALSE	canonical	3	626	junction_5	60.2547923405267	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	NA	False	NA	-32	True	AATAAA	-13	NA	36067594	36025598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_87309.known	chr18	-	3003	10	FSM	ENSG00000141424.13	ENST00000590986.5	3003	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	67.0910566062513	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTGGGGAGGCAT	-20	True	NA	NA	False	AATAAA	-17	NA	36129381	36109147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129100
transcript_87314.nic	chr18	-	1704	5	ISM	ENSG00000141424.13	ENST00000269187.10	3566	10	-110	13522	-65	-10997	5prime_fragment	FALSE	canonical	3	170	junction_3	16.299923312703	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGAAAAAGTATACCGA	388	False	NA	NA	False	AAGAAA	-3	NA	36129450	36122052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129113
transcript_87315.nnic	chr18	-	1244	2	FSM	ENSG00000288917.1	ENST00000690777.1	909	2	-54	-281	-54	281	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATACATGTATTTGA	-33	True	NA	NA	False	TTTAAA	-8	NA	36129394	36127764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36128728_36129113
transcript_87316.known	chr18	+	2722	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	167.168865977089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	-12	True	NA	27	True	AATAAA	-23	NA	36129897	36174651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_87319.known	chr18	+	8432	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	50.1900243948221	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	-11	True	NA	10	True	AATAAA	-22	NA	36129898	36180557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_87321.known	chr18	+	2542	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_18	125.927272679651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	-9	True	NA	27	True	NA	NA	NA	36129900	36174721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
transcript_87343.known	chr18	+	583	3	FSM	ENSG00000134759.14	ENST00000541190.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTAAGTTTTTTTCT	-16	True	NA	NA	False	NA	NA	NA	36129893	36136632	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306
transcript_87345.known	chr18	-	609	2	FSM	ENSG00000260552.2	ENST00000568654.2	620	2	11	0	2	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATTTTTTTTCACA	-17	True	NA	NA	False	AATAAA	-30	NA	36187448	36179995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36180391_36187234
transcript_87348.known	chr18	+	6182	15	FSM	ENSG00000075643.6	ENST00000261326.6	6182	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	5.81386449860704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAATTTTCTTTGCTTTG	1	True	NA	18	True	ATTAAA	-19	NA	36187496	36272157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36187682_36195256_36195347_36198689_36198757_36199682_36200325_36203112_36203190_36205076_36205277_36213365_36213483_36215515_36215978_36220054_36220218_36248921_36249001_36251158_36251284_36256967_36257074_36260036_36260176_36266748_36266854_36268532
transcript_87353.nnic	chr18	+	1026	2	NNC	ENSG00000075643.6	novel	6182	15	NA	NA	0	-72507	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATTCTACACAAAACAAA	1	True	NA	NA	False	AATAAA	-16	NA	36187496	36194307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_36187682_36193466
transcript_87368.known	chr18	+	1190	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	4.18330013267038	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTTGTAATTGGTA	4	True	NA	NA	False	ATTAAA	-19	NA	36829128	36886404	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
transcript_87375.known	chr18	-	1268	7	FSM	ENSG00000134779.15	ENST00000614939.4	1268	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	451.853098055355	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGTGTACATGTATG	NA	False	NA	0	True	AATAAA	-43	NA	36829216	36780026	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36780189_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_87379.known	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	396.556322187236	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-1	True	NA	-8	True	AATAAA	-16	NA	36828842	36786572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_87381.known	chr18	-	3835	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	0	0	0	multi-exon	FALSE	canonical	3	998	junction_1	99.5020937803153	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-3	True	NA	-8	True	ACTAAA	-20	NA	36829002	36794107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_87384.known	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	476.304356478082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	13	True	NA	-26	True	TATAAA	-17	NA	36828986	36796071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
transcript_87385.known	chr18	-	1102	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_2	42.3650799597971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTCCTTTTTTC	13	True	NA	-19	True	CATAAA	-14	NA	36828781	36798017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_87388.known	chr18	-	790	2	FSM	ENSG00000134779.15	ENST00000591648.1	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCAATTCGTTTATTCA	-12	True	NA	NA	False	ATTAAA	-27	NA	36829011	36818512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36818974_36828682
transcript_87391.known	chr18	-	579	2	FSM	ENSG00000101489.20	ENST00000590011.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGGCTGGGGCAAGTGG	-11	True	NA	NA	False	GGGGCT	-22	NA	37253981	37244833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_37245198_37253766
transcript_87394.known	chr18	-	1126	5	FSM	ENSG00000267374.3	ENST00000667722.1	1126	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.3205080756888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTTCAAGAGCCTGCTT	1	True	NA	NA	False	AATAAA	-37	NA	39800291	39348131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_39348758_39535457_39535616_39699548_39699636_39751328_39751361_39800068
transcript_87395.known	chr18	-	1666	5	FSM	ENSG00000267374.3	ENST00000666611.1	1666	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.8011417955842	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTGTATTTTCTGTT	-2	True	NA	1	True	AATAAA	-21	NA	39800294	39206917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_39208040_39233402_39233531_39535457_39535616_39751328_39751361_39800068
transcript_874.known	chr1	-	2450	16	FSM	ENSG00000127054.22	ENST00000323275.10	2450	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	117.504874603378	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-2	True	NA	-15	True	AGTAAA	-15	NA	1324621	1311599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319434_1320455_1321094_1324580
transcript_87402.known	chr18	+	9415	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_15	19.4415077147381	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	6	True	NA	NA	False	AATAAA	-20	NA	41955233	42087830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_87413.known	chr18	-	3936	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.87400787401181	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTCAATGCAGACTTT	-1	True	NA	-13	True	AATAAA	-18	NA	43277490	43267891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
transcript_87415.known	chr18	-	3000	15	FSM	ENSG00000152229.18	ENST00000409746.5	3000	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.57644813704038	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCGTATTTTTGTGT	13	True	NA	-2	True	AATAAA	-20	NA	46072260	45983535	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_45985451_45988701_45988760_45990721_45990757_45991901_45991984_45992105_45992203_45993604_45993704_45997748_45997829_45998793_45998840_45999435_45999535_46005468_46005532_46011180_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
transcript_87420.known	chr18	-	1931	12	FSM	ENSG00000152234.16	ENST00000590156.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	1871.69721009596	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-7	True	NA	-16	True	AATAAA	-14	NA	46098295	46084149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46094979_46095132_46098171
transcript_87423.known	chr18	-	5761	12	FSM	ENSG00000152234.16	ENST00000398752.11	5761	12	0	0	0	0	multi-exon	FALSE	canonical	3	5718	junction_8	346.405986435016	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTCTTTTTTGCTCT	-8	True	NA	2	True	TTTAAA	-20	NA	46098296	46080247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171
transcript_87443.known	chr18	-	1945	13	FSM	ENSG00000152234.16	ENST00000282050.6	1945	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1795.41843428396	4005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTCATTTGTGTTA	44	False	NA	-10	True	AATAAA	-20	NA	46104233	46084143	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171_46098280_46104136
transcript_87444.known	chr18	-	1793	12	FSM	ENSG00000152234.16	ENST00000590665.5	1793	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1874.77675585589	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-8	True	NA	-16	True	AATAAA	-14	NA	46098296	46084149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089888_46089997_46091681_46091852_46095052_46095132_46098171
transcript_87445.known	chr18	+	1079	10	FSM	ENSG00000152240.13	ENST00000593165.5	1079	10	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_2	626.744321429755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCATAATTGATAGA	46	False	NA	-64	True	NA	NA	NA	46104421	46128239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105369_46109646_46109785_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_87447.known	chr18	+	1072	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_4	145.328883485011	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	9	True	NA	30	True	ATTAAA	-16	NA	46104384	46128333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_87450.known	chr18	+	1098	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	500.269411792286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGTTTCTGTGTGGT	20	True	NA	27	True	ATTAAA	-13	NA	46104395	46128330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_87457.known	chr18	+	616	7	FSM	ENSG00000152240.13	ENST00000589554.5	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	579.247116714639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTACAGAGTTCTT	30	True	NA	NA	False	AATAAA	-30	NA	46104405	46128169	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105369_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_87458.known	chr18	+	506	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	614.238520446251	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTCTTTTTCCTCTTG	26	True	NA	NA	False	AATAAA	-40	NA	46104401	46128179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_87459.nic	chr18	+	527	4	ISM	ENSG00000152240.13	ENST00000282058.11	1072	9	-63	8312	-56	60	5prime_fragment	FALSE	canonical	3	1308	junction_3	88.4772412670186	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTGCAACTTTAGTAT	6057	False	NA	19	True	AAGAAA	-32	NA	46104321	46120021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925
transcript_87460.known	chr18	+	5456	5	FSM	ENSG00000152242.11	ENST00000615052.5	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	56.4136508302733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGAGGTTTTTTTT	3	True	NA	11	True	AATAAA	-23	NA	46174033	46266992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46174331_46215810_46216596_46240004_46240188_46253696_46253824_46262928
transcript_87462.known	chr18	+	5264	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	30.8796948747159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	3	True	NA	2	True	AATAAA	-14	NA	46174033	46266983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
transcript_87464.known	chr18	+	7802	8	FSM	ENSG00000141622.14	ENST00000269439.12	7802	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16653584115759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTATGCCTGCTGGGTGTT	-9	True	NA	22	True	AATAAA	-24	NA	46334017	46463140	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46334336_46433189_46433506_46435288_46435397_46447562_46447693_46450295_46450401_46450703_46450800_46455973_46456081_46456518
transcript_87466.known	chr18	-	13761	8	FSM	ENSG00000101638.14	ENST00000538168.5	13761	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.8552629951502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGACTCTGTGGCTGTG	-5	True	NA	NA	False	AATAAA	-22	NA	46756809	46667820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46680511_46681971_46682065_46686173_46686287_46688774_46688920_46692168_46692256_46704571_46704665_46721361_46721470_46756377
transcript_87468.known	chr18	-	13897	7	FSM	ENSG00000101638.14	ENST00000315087.12	13897	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	6.10100173924104	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGACTCTGTGGCTGTG	4	True	NA	NA	False	AATAAA	-22	NA	46757053	46667820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46680511_46681971_46682065_46686173_46686287_46688774_46688920_46692168_46692256_46704571_46704665_46756377
transcript_87471.known	chr18	-	1499	6	FSM	ENSG00000101638.14	ENST00000536490.1	1499	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.9288608738514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAGGAACCGGGGCAGA	-6	True	NA	NA	False	NA	NA	NA	46756810	46679882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46680511_46681971_46682065_46686173_46686287_46688774_46688920_46692168_46692256_46756377
transcript_87473.known	chr18	-	1440	4	FSM	ENSG00000101638.14	ENST00000588155.1	1440	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.93310961716756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTCAGCACTCAGGTCC	-6	True	NA	NA	False	NA	NA	NA	46756810	46691449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46692256_46704571_46704665_46721361_46721470_46756377
transcript_87486.known	chr18	-	11243	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	61.9273290465545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGCTTTCATTGGTCA	-23	True	NA	NA	False	ATTAAA	-31	NA	46917507	46803217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_87494.nic	chr18	-	2021	14	NIC	ENSG00000078043.16	novel	4543	13	NA	NA	-7	-162	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	118.402582732106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATGGAGTGGAAAACA	-30	True	NA	-9	True	AATAAA	-13	NA	46917514	46818352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46903526_46903636_46917321
transcript_87497.known	chr18	-	2043	13	FSM	ENSG00000078043.16	ENST00000398654.7	2043	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	112.98927554812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGCAACAAGAACCAAA	30	True	NA	NA	False	NA	NA	NA	46917454	46812279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46890579_46891055_46917321
transcript_87502.known	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	61.5559817474215	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-19	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_87503.known	chr18	-	1590	12	FSM	ENSG00000078043.16	ENST00000545673.5	1590	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	122.390581931187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTTATGACTCAAATA	-21	True	NA	24	True	NA	NA	NA	46917505	46818190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46917321
transcript_87506.known	chr18	-	1838	11	FSM	ENSG00000078043.16	ENST00000590127.5	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	24.8427051667084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTGTGAGGTATTTA	10	True	NA	NA	False	NA	NA	NA	46917474	46827757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_87516.nnic	chr18	+	1071	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-47	198	-43	-2	multi-exon	FALSE	canonical	3	44	junction_1	29.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868596	46875565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_87520.nnic	chr18	+	1024	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-4	122	-1	-122	multi-exon	FALSE	canonical	3	103	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	NA	False	NA	24	True	NA	NA	NA	46868642	46875445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868991_46874769
transcript_87522.nnic	chr18	+	1198	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-58	2	-51	-2	multi-exon	FALSE	canonical	3	103	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868588	46875565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868991_46874769
transcript_87525.nnic	chr18	+	3452	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-58	-2252	-51	2056	multi-exon	FALSE	canonical	3	103	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCGTTTGAGTACTCAT	NA	False	NA	28	True	AGTAAA	-18	NA	46868588	46877819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868991_46874769
transcript_87527.known	chr18	+	3689	18	FSM	ENSG00000167216.19	ENST00000683218.1	3689	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	12.1019315567741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	0	True	NA	NA	False	AATAAA	-16	NA	46917601	47102243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46917927_46946056_46946547_46946853_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_87529.known	chr18	+	2893	16	FSM	ENSG00000167216.19	ENST00000356157.12	2893	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_13	11.712481471585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	-1	True	NA	NA	False	AATAAA	-16	NA	46946834	47102243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_87538.known	chr18	-	2224	7	FSM	ENSG00000167220.12	ENST00000588183.5	2224	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	169.707264298131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	-20	True	NA	-7	True	AATAAA	-17	NA	47150500	47107407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136301_47136450_47150377
transcript_87539.known	chr18	-	2185	7	FSM	ENSG00000167220.12	ENST00000300605.11	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	202.81415959773	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTGTTTTTGTTTTTG	-20	True	NA	-9	True	AATAAA	-15	NA	47150500	47107409	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47150377
transcript_87543.known	chr18	-	788	4	FSM	ENSG00000167220.12	ENST00000587841.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	247.968187923819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGTTCTCTGCTGTCTC	4	True	NA	NA	False	GGGGCT	-25	NA	47150476	47108377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47150377
transcript_87544.known	chr18	-	3679	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	38.5	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTCATTGATTTAT	-28	True	NA	NA	False	AGTAAA	-20	NA	47176364	47152833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47156233_47157435_47157538_47176186
transcript_87546.known	chr18	-	4109	9	FSM	ENSG00000215474.8	ENST00000425639.3	4109	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.26861144563653	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGTTCATGTAGTTA	NA	False	NA	NA	False	AATAAA	-16	NA	47251660	47206168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47206893_47212085_47212152_47219942_47220011_47230458_47230558_47230934_47231001_47244907_47244983_47245497_47245562_47246570_47249231_47251373
transcript_87553.known	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	84.9329147033116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-15	True	NA	NA	False	AATAAA	-19	NA	47931141	47831550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_87554.nic	chr18	-	2170	11	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	100.554661751706	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTAATGTGTTC	1191	False	NA	3	True	AATAAA	-36	NA	47930362	47841224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930251
transcript_87560.known	chr18	-	10445	10	FSM	ENSG00000175387.16	ENST00000356825.8	10445	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	123.889835571869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGGACTAATTTTTAA	407	False	NA	-18	True	ATTAAA	-30	NA	47931146	47833095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520_47896810_47930799
transcript_87564.nic	chr18	-	1831	10	ISM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	13633	0	-272	5prime_fragment	FALSE	canonical	3	79	junction_9	88.4722178615035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCAAATTACTGAGCT	-15	True	NA	-7	True	AATAAA	-24	NA	47931141	47845183	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_87575.known	chr18	+	4407	13	FSM	ENSG00000134030.14	ENST00000382998.8	4407	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.1566140804298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGCTCCAGACATACTG	17	True	NA	15	True	TATAAA	-45	NA	48539157	48861906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_48539313_48539757_48539832_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758412_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_87577.known	chr18	+	5765	12	FSM	ENSG00000134030.14	ENST00000256413.8	5765	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	12.2420491991758	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGAGTCTGTGCTCTT	-17	True	NA	NA	False	AATAAA	-21	NA	48539030	48863217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_48539313_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758406_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_87593.known	chr18	-	1278	4	FSM	ENSG00000101665.10	ENST00000589634.1	1278	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	27.8248490062789	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGTGCGGAGGGGACAGA	2762	False	NA	NA	False	NA	NA	NA	48950424	48921371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_48921911_48942480_48942553_48948383_48948438_48949811
transcript_87597.known	chr18	-	5049	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_14	12.2365998136737	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	-13	True	AATAAA	-20	NA	49460802	49041473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_87611.known	chr18	-	2147	12	FSM	ENSG00000141627.14	ENST00000442713.6	2147	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	54.6772649808412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATTTTTTTGCATGTTC	19	True	NA	NA	False	NA	NA	NA	49460665	49043668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49391592_49391646_49430254_49430448_49460397
transcript_87614.known	chr18	-	758	8	FSM	ENSG00000265681.8	ENST00000583637.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	5730.14217866844	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	140	False	NA	-100	True	AAGAAA	-40	NA	49492399	49488551	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492274
transcript_87615.known	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	5676.97325938348	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	57	False	49492512	-1	True	ATTAAA	-39	NA	49492482	49488452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
transcript_87617.known	chr18	-	684	7	FSM	ENSG00000265681.8	ENST00000578532.5	684	7	0	0	0	0	multi-exon	FALSE	canonical	3	1548	junction_6	4354.61053558945	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAGAAACTGAAGAAACA	19	True	NA	-109	True	AAGAAA	-31	NA	49492432	49488560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492274
transcript_87618.known	chr18	-	614	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	3	7848	junction_6	2323.29139727815	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-14	True	NA	-29	True	AATAAA	-21	NA	49492465	49488480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
transcript_87620.nic	chr18	-	939	7	NIC	ENSG00000265681.8	novel	747	8	NA	NA	-36	0	intron_retention	FALSE	canonical	3	402	junction_6	4755.55642555807	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-5	True	NA	-32	True	AATAAA	-18	NA	49492544	49488483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_87622.known	chr18	-	650	7	FSM	ENSG00000265681.8	ENST00000615760.4	650	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	6200.87173083126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTCGGATTAACCCAT	23	True	NA	NA	False	NA	NA	NA	49492428	49489470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492274
transcript_87625.known	chr18	-	795	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_5	5162.76122244676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	56	False	49492512	NA	False	AAAAAG	-1	NA	49492483	49489358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_87626.known	chr18	-	5548	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	116.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	5	True	NA	-1	True	AATAAA	-30	NA	49487234	49477242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49482411_49483583_49483772_49487042
transcript_87627.known	chr18	-	5395	3	FSM	ENSG00000177576.12	ENST00000613385.4	5395	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	155.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTATCTTGAGTTTT	-13	True	NA	-8	True	AATAAA	-23	NA	49487252	49477249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49482411_49483583_49483772_49487206
transcript_87632.known	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	9021	junction_1	1717.09226310062	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	699	False	NA	-32	True	AATAAA	-18	NA	49491840	49488483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_87633.known	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	5131.13864166619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	725	False	NA	-66	True	AGTAAA	-1	NA	49491814	49488517	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
transcript_87635.known	chr18	+	10418	10	FSM	ENSG00000101670.12	ENST00000261292.9	10418	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.94405318873308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTACCATATTACAT	-2	True	NA	NA	False	AATAAA	-21	NA	49562056	49599185	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414_49581658_49582361_49582483_49583555_49583775_49586745_49586851_49590500
transcript_87640.known	chr18	+	1453	6	FSM	ENSG00000101670.12	ENST00000580036.5	1453	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.72763633939717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGGCTATCAGTCCA	28	False	NA	NA	False	AATAAA	-18	NA	49562086	49581852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414
transcript_87643.known	chr18	-	1693	9	FSM	ENSG00000167306.20	ENST00000592688.1	1693	9	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_7	2.57087047515039	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGCTCAGAATAAAAACAC	-4	True	NA	-34	True	NA	NA	NA	49849846	49826289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566
transcript_87646.known	chr18	-	2926	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_9	132.472032920813	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTACATATTCT	-7	True	NA	-13	True	AATAAA	-19	NA	49813533	49782163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
transcript_87647.nic	chr18	-	1792	10	NIC	ENSG00000167315.18	novel	1657	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	313.265240828138	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-7	True	NA	-30	True	AATAAA	-16	NA	49813953	49783504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813681
transcript_87648.nic	chr18	-	1746	10	NIC	ENSG00000167315.18	novel	1657	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	326.187403530888	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-11	True	NA	-30	True	AATAAA	-16	NA	49813957	49783504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_87650.known	chr18	-	1657	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	285.04831732511	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-7	True	NA	-30	True	AATAAA	-16	NA	49813953	49783504	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
transcript_87654.known	chr18	+	421	1	FSM	ENSG00000267322.3	ENST00000615535.1	421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCAGGAGGCGGCCGC	-7	True	NA	16	True	NA	NA	NA	49814022	49814443	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_49814000_49814400
transcript_87655.known	chr18	-	727	5	FSM	ENSG00000167315.18	ENST00000586485.5	727	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	422.721539550565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAATATGCCCTGCAGTC	9	True	NA	NA	False	AAAACA	-23	NA	49813937	49794319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_87666.nic	chr18	-	3357	18	NIC	ENSG00000141644.18	novel	2179	18	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	48.9187590061212	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGCTTAGTGTTTC	-22	True	NA	-6	True	TTTAAA	-30	NA	50281797	50268846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87672.nnic	chr18	-	3338	18	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	52.2725092655164	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTACATGCTTAGTGTT	-12	True	NA	-8	True	TTTAAA	-28	NA	50281787	50268848	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50269812_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87679.nic	chr18	-	3163	18	NIC	ENSG00000141644.18	novel	2179	18	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	48.9187590061212	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAATGGATTTCCAACT	-12	True	NA	-22	True	ATTAAA	-22	NA	50281787	50269030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87687.nic	chr18	-	3086	17	NIC	ENSG00000141644.18	novel	2434	17	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	52.399270927657	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTTTTCCTGTGATTA	-17	True	NA	-28	True	NA	NA	NA	50281792	50266885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50267664_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87694.known	chr18	-	3009	17	FSM	ENSG00000141644.18	ENST00000269468.10	3009	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	58.5650012806283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-12	True	NA	-5	True	TTTAAA	-31	NA	50281523	50268845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87724.known	chr18	-	2473	17	FSM	ENSG00000141644.18	ENST00000457839.6	2473	17	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	34.4514490805539	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTATTTGGTGTGTTC	6846	False	NA	-28	True	AATAAA	-11	NA	50281466	50271049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87732.nic	chr18	-	2893	16	NIC	ENSG00000141644.18	novel	2434	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	58.4762059872788	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTTTTCCTGTGATTA	8	True	NA	-28	True	NA	NA	NA	50281767	50266885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50267664_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87740.known	chr18	-	3091	16	FSM	ENSG00000141644.18	ENST00000347968.7	3091	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	64.3368220124888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGCTTAGTGTTTC	1	True	NA	-6	True	TTTAAA	-30	NA	50281774	50268846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87746.known	chr18	-	2913	16	FSM	ENSG00000141644.18	ENST00000590208.5	2913	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	64.2769701284129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAATGGATTTCCAACT	1	True	NA	-22	True	ATTAAA	-22	NA	50281684	50269030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50269819_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87773.known	chr18	-	4905	16	FSM	ENSG00000141644.18	ENST00000591416.5	4905	16	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	47.9773094516796	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	6	True	NA	-5	True	TTTAAA	-31	NA	50281769	50268845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87776.nic	chr18	-	2711	16	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_5	42.0963973122008	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGTTCCTCTGTGG	6448	False	NA	-20	True	AATAAA	-19	NA	50281864	50271041	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87799.known	chr18	-	1845	15	FSM	ENSG00000141644.18	ENST00000398493.5	1845	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	54.7966556405385	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTGCAGACTGGCT	11	True	NA	NA	False	NA	NA	NA	50281500	50271468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_87822.known	chr18	-	2242	15	FSM	ENSG00000154832.16	ENST00000589940.5	2242	15	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	78.52703291198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	661	False	NA	28	True	AATAAA	-17	NA	50287651	50282346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_87829.known	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_9	30.6980854285669	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-7	True	NA	28	True	AATAAA	-17	NA	50287692	50282346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_87839.known	chr18	-	2386	14	FSM	ENSG00000154832.16	ENST00000589548.6	2386	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	108.268513455746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTGAAGAAACCAAGGA	0	True	NA	11	True	NA	NA	NA	50287839	50282363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_87844.known	chr18	-	2423	14	FSM	ENSG00000154832.16	ENST00000673786.1	2423	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	81.8544674782864	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTGAAGAAACCAAGGA	0	True	NA	11	True	NA	NA	NA	50287839	50282363	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_87895.nnic	chr18	+	2543	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	78.2064249148315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50374990	50394168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392849_50393209
transcript_87898.known	chr18	+	2849	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	29.4207976325139	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-4	True	NA	14	True	AATAAA	-14	NA	50375045	50394168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_87901.known	chr18	+	979	7	FSM	ENSG00000154839.10	ENST00000398452.6	979	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	49.0082192652983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTGTGAACTTTTGAA	-10	True	NA	NA	False	NA	NA	NA	50375039	50392247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_87909.known	chr18	+	4763	6	FSM	ENSG00000141639.12	ENST00000400384.7	4763	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.63818119165458	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATGTATTATTCAT	-18	True	NA	6	True	AATAAA	-19	NA	50560086	50731826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50560244_50663088_50664505_50715078_50715224_50721937_50722100_50725961_50726176_50729157
transcript_87911.known	chr18	+	4330	4	FSM	ENSG00000141639.12	ENST00000592595.5	4330	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	9.89949493661167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATGTATTATTC	37	False	NA	4	True	AATAAA	-17	NA	50560141	50731824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50560244_50663088_50664505_50715078_50715224_50729157
transcript_87912.known	chr18	+	9031	16	FSM	ENSG00000082212.13	ENST00000321341.11	9031	16	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_13	34.5191734161369	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATGATCTTGTTTTT	-20	True	NA	7	True	AGTAAA	-19	NA	50879117	50954257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
transcript_87914.known	chr18	+	2569	15	FSM	ENSG00000082212.13	ENST00000640967.1	2569	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	108.490195174401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAATAAATATCTTACA	-21	True	NA	-15	True	TATAAA	-20	NA	50879116	50947865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50940287_50940387_50947016
transcript_87921.known	chr18	+	8772	12	FSM	ENSG00000141646.15	ENST00000342988.8	8772	12	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_3	33.328319182103	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTATGTGCTCATTCTTT	-24	True	NA	16	True	ATTAAA	-18	NA	51030212	51085042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_51030624_51046919_51047296_51048685_51048861_51049294_51049325_51054780_51054994_51058124_51058245_51058339_51058457_51059865_51059917_51065422_51065607_51067018_51067188_51076637_51076777_51078255
transcript_87925.known	chr18	+	2211	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	14.522013940528	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTAAAACATGCTCC	7	True	NA	NA	False	AATAAA	-18	NA	50968039	50988121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
transcript_87926.known	chr18	+	694	4	FSM	ENSG00000141642.9	ENST00000588577.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.0151463012778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTGCCTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	50967990	50986946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50968115_50974396_50974562_50984486_50984564_50986618
transcript_87928.known	chr18	+	1505	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTAGTTGAGTAGTGAG	12	True	NA	NA	False	AATAAA	-17	NA	50968044	50969866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50968115_50968431
transcript_87929.known	chr18	-	4142	2	FSM	ENSG00000176624.12	ENST00000406189.4	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCCTTGGTGTTTT	0	True	NA	-3	True	AATAAA	-23	NA	51197681	51174549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_51177577_51196566
transcript_87930.known	chr18	+	6020	10	FSM	ENSG00000101751.11	ENST00000579534.6	6020	10	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	43.9514322299254	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGTCCAGAGTTTTC	-38	True	NA	7	True	AATAAA	-14	NA	54269516	54298234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_87932.nnic	chr18	+	2507	10	NNC	ENSG00000101751.11	novel	6020	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	112.317451344585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	3	True	NA	11	True	AATAAA	-18	NA	54269557	54294724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_54269700_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_87934.nic	chr18	+	2828	10	NIC	ENSG00000101751.11	novel	2705	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	114.464399554762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	15	True	NA	11	True	AATAAA	-18	NA	54269569	54294724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_87937.known	chr18	+	2030	9	FSM	ENSG00000101751.11	ENST00000406285.7	2030	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	127.507597812836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCTGAAAAGCAAGGGAAT	-36	True	NA	NA	False	CATAAA	-20	NA	54269518	54294483	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_87939.known	chr18	+	2096	8	FSM	ENSG00000166845.15	ENST00000648616.1	2096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	61.842459491181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAGAGAACCTCCTCAT	556	False	NA	70	True	NA	NA	NA	54358481	54378845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54361892_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_87942.known	chr18	+	4056	8	FSM	ENSG00000166845.15	ENST00000382911.8	4056	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	33.4053643498606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATGTTAAATAGAAAA	659	False	NA	NA	False	NA	NA	NA	54358584	54380368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_87948.known	chr18	-	7883	21	FSM	ENSG00000196628.20	ENST00000637115.2	7883	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	54.6716562763558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTCTTTTAGTATTAT	1693	False	NA	-4	True	TATAAA	-13	NA	55588153	55222334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55518981_55519025_55585279_55585353_55587044_55587137_55588037
transcript_87950.known	chr18	-	8041	20	FSM	ENSG00000196628.20	ENST00000354452.8	8041	20	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	27.0847648602425	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTTCATTTTCAAA	30	True	NA	NA	False	ATTAAA	-17	NA	55588192	55222184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_87952.known	chr18	-	3789	20	FSM	ENSG00000196628.20	ENST00000629387.2	3789	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	41.2653060665318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACAAGTAAAGTT	1	True	NA	NA	False	AATACA	-29	NA	55589807	55226792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_87954.known	chr18	-	8317	20	FSM	ENSG00000196628.20	ENST00000356073.8	8317	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	29.5888726558068	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTTTTAGTATTATA	1217	False	NA	-3	True	TATAAA	-14	NA	55588629	55222333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_87960.nic	chr18	-	2780	20	NIC	ENSG00000196628.20	novel	3789	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_19	42.8243853177058	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAGTGCAACTT	NA	False	NA	NA	False	AAAACA	-16	NA	55589858	55227840	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_87965.known	chr18	-	2398	19	FSM	ENSG00000196628.20	ENST00000568673.5	2398	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	45.4001414040328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAATTTGTAAGTCT	3938	False	NA	NA	False	NA	NA	NA	55585908	55227678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55585810
transcript_87969.known	chr18	-	2767	19	FSM	ENSG00000196628.20	ENST00000537578.5	2767	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	44.8521920958438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTGAACGGCAATCTT	10	False	NA	NA	False	NA	NA	NA	55589836	55227751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_87973.known	chr18	-	2572	19	FSM	ENSG00000196628.20	ENST00000540999.5	2572	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	46.8898104174847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAATATAATTAA	5	True	NA	NA	False	NA	NA	NA	55586105	55227689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55585810
transcript_87977.known	chr18	-	2628	19	FSM	ENSG00000196628.20	ENST00000568740.5	2628	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	56.1646609159396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAAGTGC	2	True	NA	NA	False	AAAACA	-11	NA	55589806	55227845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351001_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_87985.known	chr18	-	8140	18	FSM	ENSG00000196628.20	ENST00000616053.4	8140	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	48.0541793421668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTAGTATTATATTT	1217	False	NA	0	True	TATAAA	-17	NA	55588629	55222330	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_87993.known	chr18	-	3163	13	FSM	ENSG00000196628.20	ENST00000570287.6	3163	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	54.9143272137002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCCAATATTCAATC	4413	False	NA	NA	False	ACTAAA	-35	NA	55321986	55226643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_87994.known	chr18	-	2372	13	FSM	ENSG00000196628.20	ENST00000457482.7	2372	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	53.1081182327356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAATTAATTTGTAA	0	True	NA	NA	False	NA	NA	NA	55322222	55227682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_88000.known	chr18	+	555	2	FSM	ENSG00000267284.2	ENST00000592936.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACGCAATTGGGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	55721062	55759122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_55721535_55759039
transcript_88001.known	chr18	+	7213	27	FSM	ENSG00000091157.15	ENST00000357574.7	7213	27	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_19	6.08713844411886	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTCCAGTGTTCAC	4	True	NA	24	True	AATAAA	-34	NA	56651360	57029811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_56651577_56672496_56672675_56679331_56679439_56681312_56681392_56682678_56682854_56685955_56686033_56686854_56686975_56691215_56691362_56691714_56691818_56694618_56694761_56694949_56695199_56696241_56696463_56717963_56718160_56731382_56731598_56756582_56757353_56758864_56758954_56779430_56779550_56781532_56781657_56816030_56816145_56879943_56880166_56923921_56924109_56935787_56935906_56938532_56938683_56939310_56939394_56962429_56962530_57020744_57020850_57027003
transcript_88008.known	chr18	-	1339	10	FSM	ENSG00000091164.13	ENST00000590954.5	1339	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	355.314258399831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTTTCTAAATCAG	5	True	NA	-13	True	AATAAA	-25	NA	56651128	56602821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342_56638506_56647448_56647536_56651016
transcript_8801.known	chr1	+	1887	8	FSM	ENSG00000132773.12	ENST00000372090.6	1887	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	13.3950950511212	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	5	True	NA	27	True	NA	NA	NA	45340169	45343973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_88011.known	chr18	-	6840	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_1	56.4338153078815	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTGTATTTTGT	14	True	NA	NA	False	ATTAAA	-16	NA	56638592	56597208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
transcript_88015.known	chr18	-	7695	11	FSM	ENSG00000066926.13	ENST00000652755.1	7695	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	56.7978872846517	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCACACCTACATTATAT	-9	True	NA	NA	False	AGTAAA	-17	NA	57586702	57544388	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580054_57580200_57586553
transcript_88018.known	chr18	-	1874	11	FSM	ENSG00000066926.13	ENST00000585494.5	1874	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	59.4286126373484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTTAATCTTTCC	-8	True	NA	NA	False	AAAAAG	-1	NA	57586701	57550253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571604_57573245_57573366_57580072_57580200_57586553
transcript_88027.known	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_13	132.476636323533	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-39	True	NA	-26	True	AATAAA	-20	NA	57621836	57600655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
transcript_88045.known	chr18	+	1954	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTAAGGCTAAAACTCA	5	True	NA	NA	False	AATAAA	-44	NA	57630349	57669296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_57630519_57641558_57642053_57668005
transcript_88047.known	chr18	+	8633	31	FSM	ENSG00000049759.20	ENST00000400345.8	8633	31	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	60.5483828575683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	-29	True	NA	23	True	AATAAA	-28	NA	58044225	58401539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_88050.known	chr18	+	8251	30	FSM	ENSG00000049759.20	ENST00000382850.8	8251	30	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	35.7779849806368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	178	False	NA	23	True	AATAAA	-28	NA	58044547	58401539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_88057.known	chr18	+	4978	29	FSM	ENSG00000049759.20	ENST00000456173.6	4978	29	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	46.1201292987196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	86	True	NA	NA	NA	58195389	58398157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_88068.known	chr18	+	728	2	FSM	ENSG00000049759.20	ENST00000617539.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGGTCGGTTTCACTGG	17	True	NA	10	True	AATAAA	-24	NA	58044386	58045477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58044709_58045071
transcript_88071.known	chr18	+	9289	17	FSM	ENSG00000172175.15	ENST00000649217.2	9289	17	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	12.2417063761552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGTCTGTACAGACT	-2	True	NA	NA	False	TTTAAA	-29	NA	58671464	58754477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58671853_58681169_58681337_58696365_58696488_58700440_58700592_58709377_58709557_58709975_58710073_58710920_58710954_58714082_58714110_58715934_58715968_58723047_58723252_58733396_58733575_58734306_58734382_58735201_58735330_58741864_58742015_58744337_58744496_58745665_58745792_58747404
transcript_88074.known	chr18	+	2866	16	FSM	ENSG00000172175.15	ENST00000345724.7	2866	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	26.8568220176716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTAGAATAAGTCATTG	-23	True	NA	88	True	NA	NA	NA	58671531	58748154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58671853_58681169_58681337_58696365_58696488_58700440_58700592_58709377_58709557_58709975_58710073_58714082_58714110_58715934_58715968_58723047_58723252_58733396_58733575_58734306_58734382_58735201_58735330_58741864_58742015_58744337_58744496_58745665_58745792_58747404
transcript_88076.known	chr18	-	1209	2	FSM	ENSG00000267226.2	ENST00000588144.2	1209	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCCTTTTAATTTAAAT	NA	False	NA	2	True	AATAAA	-22	NA	58671877	58670008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_58670809_58671468
transcript_88080.known	chr18	+	6696	11	FSM	ENSG00000074657.14	ENST00000336078.8	6696	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	92.5721340361126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATTTTTGTTTTTGG	NA	False	NA	5	True	AATAAA	-20	NA	58862599	58986480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58863167_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
transcript_88085.known	chr18	+	5324	10	FSM	ENSG00000074657.14	ENST00000591083.5	5324	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	98.3528543084403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTATTGCAATTGGCCG	12	True	NA	NA	False	NA	NA	NA	58862947	58985538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58863167_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
transcript_88107.known	chr18	+	727	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	347.506201383515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-29	True	NA	15	True	AATAAA	-16	NA	59139874	59158832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
transcript_88108.known	chr18	+	791	6	FSM	ENSG00000166562.9	ENST00000587834.6	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_5	65.9302661908778	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-20	True	NA	15	True	AATAAA	-16	NA	59139883	59158832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
transcript_88110.known	chr18	+	718	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	356.436880807809	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-5	True	NA	15	True	AATAAA	-16	NA	59139898	59158832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
transcript_88111.known	chr18	+	2054	4	FSM	ENSG00000166562.9	ENST00000509791.7	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_3	69.5045961709648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTATTCTTTTTGTAC	-38	True	NA	NA	False	AATAAA	-17	NA	59139865	59157311	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687
transcript_88112.known	chr18	+	1088	3	FSM	ENSG00000166562.9	ENST00000585864.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	46.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCATTTACCTTTATG	-20	True	NA	NA	False	AGTAAA	-23	NA	59139883	59153361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535
transcript_88114.known	chr18	+	824	3	FSM	ENSG00000134443.10	ENST00000529320.2	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGGCTGTTCTCTTAT	13	False	NA	20	True	AATAAA	-21	NA	59220171	59230770	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59220405_59225491_59225716_59230403
transcript_88115.known	chr18	+	858	3	FSM	ENSG00000134443.10	ENST00000256857.7	858	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGCTGTTCTCTTATT	-1	True	NA	21	True	AATAAA	-22	NA	59220157	59230771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59220405_59225491_59225735_59230403
transcript_88117.known	chr18	-	4824	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	0	0	0	multi-exon	TRUE	canonical	3	535	junction_5	49.6914787016401	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTCCTTCATTGA	-5	True	NA	-19	True	AATAAA	-17	NA	59359265	59327822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_88121.nic	chr18	-	957	8	ISM	ENSG00000074695.6	ENST00000251047.6	4824	13	-33	18148	-33	0	5prime_fragment	FALSE	canonical	3	574	junction_1	32.5093393174507	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGGAATTCCA	118	False	NA	NA	False	AAAAAG	-45	NA	59359298	59345970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_88124.nic	chr18	-	876	7	ISM	ENSG00000074695.6	ENST00000251047.6	4824	13	-33	19690	-33	-1542	5prime_fragment	FALSE	canonical	3	598	junction_1	26.5936500357176	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTACACATATTTTC	118	False	NA	NA	False	NA	NA	NA	59359298	59347512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_88129.known	chr18	+	1899	2	FSM	ENSG00000141682.12	ENST00000316660.7	1899	2	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	0	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTGTTAATTTT	0	True	NA	29	True	ATTAAA	-14	NA	59899995	59904305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59900236_59902646
transcript_88131.known	chr18	-	653	2	FSM	ENSG00000267279.3	ENST00000586949.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAACTGCTTATTTCC	15	True	NA	2	True	AATAAA	-18	NA	61606916	61606067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_61606655_61606850
transcript_88133.known	chr18	-	682	3	FSM	ENSG00000176641.11	ENST00000591306.5	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACATGGGCTGCCGCCT	233	False	NA	NA	False	NA	NA	NA	61894231	61816121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_61816599_61892794_61892918_61894149
transcript_88134.known	chr18	-	7936	31	FSM	ENSG00000197563.11	ENST00000640252.2	7936	31	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_29	44.4104717380935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTTATGATTTGA	-36	True	NA	NA	False	AATAAA	-18	NA	62187056	62041163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
transcript_88136.known	chr18	-	4456	30	FSM	ENSG00000197563.11	ENST00000400334.7	4456	30	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_28	37.8268160736365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTTTATGGTATACCAG	-18	True	NA	66	True	NA	NA	NA	62187038	62044548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_88138.known	chr18	-	6045	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_28	22.6194110246496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCCTCCTGGGCTCA	-36	True	NA	NA	False	NA	NA	NA	62187056	62042851	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_88144.known	chr18	-	4195	26	FSM	ENSG00000197563.11	ENST00000638167.1	4195	26	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	42.5657890799642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTACAACATTGTAAAGG	22	True	NA	-22	True	AATAAA	-5	NA	62186998	62044241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_88145.known	chr18	-	2177	16	FSM	ENSG00000197563.11	ENST00000589339.6	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_14	58.4429826602153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACAACTGGTCAGAAAAC	-8	True	NA	NA	False	NA	NA	NA	62187028	62112810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
transcript_88151.known	chr18	+	8617	29	FSM	ENSG00000134444.15	ENST00000644646.2	8617	29	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	16.6722227133661	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTAATTTATTTTT	-28	True	NA	NA	False	ATTAAA	-38	NA	62187254	62310249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62273979_62274087_62275373_62275474_62279773_62279857_62280645_62280710_62282305_62282445_62287350_62287468_62291542_62291632_62298789_62298861_62305413
transcript_88158.nic	chr18	+	1433	2	ISM	ENSG00000134444.15	ENST00000587725.5	3268	22	-36	63763	0	-15642	5prime_fragment	FALSE	canonical	3	131	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAAATACTTCTGTGCT	-28	True	NA	NA	False	AATAAA	-32	NA	62187254	62211808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_62188032_62211152
transcript_88159.known	chr18	+	3268	22	FSM	ENSG00000134444.15	ENST00000587725.5	3268	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	31.218344511098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTATGTTGATATATATT	8	True	NA	NA	False	AATAAA	-16	NA	62187290	62275571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268880_62268949_62273979_62274087_62275373
transcript_88162.known	chr18	+	8148	10	FSM	ENSG00000141655.17	ENST00000586569.3	8148	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	9.21083634491676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTGGATGTGTGCTTT	1	True	NA	NA	False	AATAAA	-14	NA	62325309	62391288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62325428_62348167_62348250_62349811_62349938_62354390_62354535_62358247_62358342_62359954_62360050_62361679_62361794_62366707_62366761_62368700_62369485_62384750
transcript_8817.known	chr1	-	740	7	FSM	ENSG00000132781.20	ENST00000488731.6	740	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	117.466898410668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTTGTATTTTTTT	423	False	NA	-5	True	AGTAAA	-19	NA	45339995	45329242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45332762_45332835_45334390_45334512_45339975
transcript_88174.known	chr18	+	575	2	FSM	ENSG00000141655.17	ENST00000592013.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCTCTGGAAGACAAA	17	False	NA	NA	False	NA	NA	NA	62325325	62336786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62325428_62336313
transcript_88177.known	chr18	-	5143	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	10.9081462366888	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTATCTAGAAGTTTG	-7	True	NA	-3	True	AATAAA	-29	NA	63367206	63327725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_88182.known	chr18	-	476	3	FSM	ENSG00000119537.18	ENST00000585456.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACAGAATGTTTTACT	477	False	NA	NA	False	AATAGA	-32	NA	63367128	63359524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63359793_63362778_63362869_63367010
transcript_88183.known	chr18	-	3337	11	FSM	ENSG00000119541.10	ENST00000238497.10	3337	11	0	0	0	0	multi-exon	TRUE	canonical	3	310	junction_5	38.2653890611346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTTCAATGACTTT	-10	True	NA	1	True	ATTAAA	-23	NA	63422476	63389189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63391077_63393408_63393550_63397033_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_88187.known	chr18	-	2008	9	FSM	ENSG00000119541.10	ENST00000591475.5	2008	9	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_3	36.4758053372369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGAGGTTGCAGTGAGCC	-17	True	NA	NA	False	NA	NA	NA	63422483	63396341	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_88189.known	chr18	+	2102	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.09120616516523	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	5	True	NA	8	True	AATAAA	-16	NA	63949300	63961835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
transcript_88190.nic	chr18	+	849	2	ISM	ENSG00000081138.14	ENST00000536984.6	3766	11	-156	101284	-156	-40969	5prime_fragment	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTTGGGCAAAGTGG	274	False	NA	NA	False	AAAAAG	-15	NA	65750496	65762841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_65751151_65762646
transcript_88191.known	chr18	-	9266	2	FSM	ENSG00000171451.15	ENST00000310045.9	9266	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTATGATTGGGATAA	29	True	NA	-10	True	AATAAA	-14	NA	67516720	67506586	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_67515493_67516360
transcript_88196.known	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_7	19.0550080906132	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-13	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_88200.known	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	16.6990162242314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	37	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_88203.known	chr18	+	5703	2	FSM	ENSG00000170677.6	ENST00000397942.4	5703	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTAGTCTACTTA	15	True	NA	9	True	AATAAA	-18	NA	70289044	70330199	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_70289091_70324542
transcript_88204.known	chr18	+	285	2	FSM	ENSG00000263958.3	ENST00000580564.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTCTGTTTTATTTTG	NA	False	NA	6	True	AATAAA	-18	NA	72868387	72881399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_72868463_72881189
transcript_88205.known	chr18	-	1675	10	FSM	ENSG00000141665.13	ENST00000419743.7	1675	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.74873708374511	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGCAATGCCTTTCA	-4	True	NA	-15	True	AATAAA	-14	NA	74147834	74073367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74073731_74081926_74082052_74123367_74123511_74124488_74124572_74125974_74126102_74129404_74129615_74130415_74130659_74135761_74135867_74140201_74140313_74147669
transcript_88206.known	chr18	+	3084	6	FSM	ENSG00000075336.12	ENST00000169551.11	3084	6	0	0	0	0	multi-exon	TRUE	canonical	3	344	junction_2	23.3015020975044	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTGTGGTGTCTCTG	-2	True	NA	NA	False	ACTAAA	-39	NA	74148522	74160531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74149110_74155144_74155208_74155305_74155404_74158013_74158088_74158170_74158277_74158375
transcript_88212.known	chr18	-	776	6	FSM	ENSG00000166347.19	ENST00000494131.6	776	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	889.985932473092	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	26	True	NA	-16	True	AATATA	-16	NA	74291935	74253296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74253666_74255740_74255776_74256829_74256854_74260914_74260945_74263348_74263478_74291746
transcript_88214.known	chr18	-	718	5	FSM	ENSG00000166347.19	ENST00000299438.13	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	770.316290558625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	982	False	NA	-15	True	AATATA	-17	NA	74291041	74253295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74290887
transcript_88215.known	chr18	-	3231	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	0	0	0	multi-exon	FALSE	canonical	3	1744	junction_2	49.1655367101794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTTGCCCTGAATT	-2	True	NA	0	True	AATAAA	-18	NA	74291963	74250845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
transcript_88218.known	chr18	-	5913	4	FSM	ENSG00000166347.19	ENST00000583418.1	5913	4	0	0	0	0	multi-exon	FALSE	canonical	3	1753	junction_3	44.1688678696759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	4	True	NA	-16	True	AATATA	-16	NA	74291957	74253296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74253666_74255740_74260945_74263348_74263478_74291746
transcript_88231.known	chr18	+	4975	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	0	0	0	0	multi-exon	FALSE	canonical	1	696	junction_9	333.339327769792	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	6	True	NA	13	True	AATAAA	-24	NA	74496362	74523454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_88239.known	chr18	+	2653	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	0	0	0	0	multi-exon	TRUE	canonical	1	502	junction_1	463.241436077531	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTCAGTTGCTCGTC	-50	True	NA	23	True	AATAAA	-30	NA	74496306	74521131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_88282.known	chr18	-	2418	2	FSM	ENSG00000264247.2	ENST00000652782.1	2418	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTTGTGTTAACTAG	-13	True	NA	NA	False	AATAAA	-21	NA	74597833	74592827	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74593840_74596427
transcript_88289.known	chr18	+	2076	2	FSM	ENSG00000275763.3	ENST00000622985.1	2076	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCCCTTGCTATTGTCT	12	False	NA	NA	False	AATAAA	-16	NA	76495520	76498088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_76495787_76496278
transcript_8829.known	chr1	-	1526	6	FSM	ENSG00000280670.3	ENST00000626657.2	1526	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.506519890914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACTAAAGCAATCCTC	-17	True	NA	NA	False	NA	NA	NA	45499974	45494391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45495167_45495417_45495474_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_88290.known	chr18	-	2738	9	FSM	ENSG00000197971.16	ENST00000355994.7	2738	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.641612116476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGGGTGTCTTCTTT	-2	True	NA	-1	True	AATAAA	-21	NA	77132783	76978832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_76980472_76984774_76984895_76988494_76988528_76988876_76988913_76989955_76990061_77016831_77017269_77066297_77066386_77105210_77105287_77132579
transcript_88291.nic	chr18	-	2746	8	NIC	ENSG00000197971.16	novel	2738	9	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_4	21.4875379165293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCATGGGTGTCTTCTT	1376	False	NA	-2	True	AATAAA	-20	NA	77132825	76978833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_76980472_76984774_76984895_76988876_76988913_76989955_76990061_77016831_77017269_77066297_77066386_77105210_77105287_77132579
transcript_88293.known	chr18	-	4844	4	FSM	ENSG00000197971.16	ENST00000397860.7	4844	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.0184900284226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGCGAACTTCTTTAA	1432	False	NA	0	True	ATTAAA	-31	NA	77132769	77012778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_77017269_77066297_77066386_77105210_77105287_77132579
transcript_8830.known	chr1	-	2229	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.44580418759451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	-10	True	NA	60	True	ATTAAA	-18	NA	45500079	45493865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_88300.known	chr18	-	1052	7	FSM	ENSG00000197971.16	ENST00000579129.5	1052	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.7449628123093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCACCTGGTTCCGGAA	1357	False	NA	NA	False	NA	NA	NA	77132844	76980426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_76980472_76988876_76988913_76989955_76990061_77016831_77017269_77066297_77066386_77105210_77105287_77132579
transcript_88304.known	chr18	-	471	2	FSM	ENSG00000263146.3	ENST00000572007.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGCACGCTGCTTTCG	2151	False	NA	NA	False	NA	NA	NA	78977883	78977287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_78977430_78977554
transcript_88305.known	chr18	-	1256	2	FSM	ENSG00000263146.3	ENST00000575722.1	1256	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTGCAATGTTGTT	1191	False	NA	NA	False	ATTAAA	-19	NA	78978843	78976554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_78977430_78978462
transcript_88306.known	chr18	+	3997	3	FSM	ENSG00000256463.10	ENST00000536229.7	3997	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGACTCGCTCATCTGC	6391	False	NA	NA	False	NA	NA	NA	78991681	78997322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_78994906_78995121_78995463_78996890
transcript_88308.known	chr18	+	4361	30	FSM	ENSG00000166377.21	ENST00000426216.6	4361	30	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_28	17.9098681439095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTTCTCACACACTCT	-18	True	NA	29	True	AGTAAA	-31	NA	79069393	79378283	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79176812_79176908_79193182_79193264_79206936_79207013_79213961_79214039_79253380_79253542_79277053_79277197_79303603_79303717_79306985_79307235_79329140_79329303_79330011_79330105_79336627_79336712_79337278_79337450_79342267_79342367_79344264_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79348131_79348197_79359353_79359463_79372824_79372883_79373897_79374102_79375393_79375427_79377246
transcript_88310.known	chr18	+	4329	29	FSM	ENSG00000166377.21	ENST00000307671.12	4329	29	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_28	12.3768937944866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTCACACACTCTAAAG	-15	True	NA	33	True	AGTAAA	-35	NA	79069396	79378287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79176812_79176908_79193182_79193264_79206936_79207013_79213961_79214039_79253380_79253542_79277053_79277197_79303603_79303717_79306985_79307235_79329140_79329303_79330011_79330105_79336627_79336712_79337278_79337450_79342267_79342367_79344264_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79348131_79348197_79359353_79359463_79372824_79372883_79373897_79374102_79377246
transcript_88324.known	chr18	+	1650	5	FSM	ENSG00000166377.21	ENST00000586722.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	35.5694742721902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAACCCCATCAAAAAG	-4	True	NA	NA	False	AAGAAA	-5	NA	79069407	79116082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79114993
transcript_88325.known	chr18	+	1302	1	FSM	ENSG00000279416.1	ENST00000624383.1	1302	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79085133	79086435	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79085100_79086400
transcript_88326.known	chr18	+	2110	1	FSM	ENSG00000279077.1	ENST00000625182.1	2110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	8294	False	NA	NA	False	NA	NA	NA	79352457	79354567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79352500_79354600
transcript_88327.known	chr18	+	4642	10	FSM	ENSG00000131196.18	ENST00000253506.9	4642	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.2910046630673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTAGTCTGCGAGTGGTT	137	False	NA	31	True	AATAAA	-22	NA	79395855	79529325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486631_79527527
transcript_88329.known	chr18	+	4302	10	FSM	ENSG00000131196.18	ENST00000318065.9	4302	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	17.3461491083436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTCTGCGAGTGG	9	True	NA	29	True	AATAAA	-20	NA	79400321	79529323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486631_79527527
transcript_88330.known	chr18	+	4595	10	FSM	ENSG00000131196.18	ENST00000329101.8	4595	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	20.7905486599139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTCTGCGAGTGG	23	True	NA	29	True	AATAAA	-20	NA	79400335	79529323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486938_79527527
transcript_88331.known	chr18	+	2195	8	FSM	ENSG00000131196.18	ENST00000587635.5	2195	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	27.9277493485148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTGCACATTTAACTGT	184	False	NA	NA	False	NA	NA	NA	79396130	79467676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451042_79451675_79451817_79461310_79461367_79467449
transcript_88332.known	chr18	+	4819	8	FSM	ENSG00000131196.18	ENST00000591814.5	4819	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	20.4968887634097	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGTATCCGTGTTCCG	-1	True	NA	NA	False	AATAAA	-19	NA	79395929	79470014	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
transcript_88335.nic	chr18	+	2514	8	NIC	ENSG00000131196.18	novel	2531	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	23.1446207440899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGATGTGGTCTTTAA	4318	False	NA	19	True	AATAAA	-19	NA	79400264	79468001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451042_79451675_79451817_79461310_79461367_79467449
transcript_88336.known	chr18	+	2531	8	FSM	ENSG00000131196.18	ENST00000592223.5	2531	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	5.16661180572146	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGATGTGGTCTTTAA	20	True	NA	19	True	AATAAA	-19	NA	79400332	79468001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
transcript_88342.known	chr18	-	2984	3	FSM	ENSG00000286186.1	ENST00000651685.1	2984	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTCCTGCCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	79465843	79460377	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79463016_79463168_79463377_79465705
transcript_88343.known	chr18	-	2072	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTAAAGTTTTCCT	-10	True	NA	-8	True	ATTAAA	-14	NA	79679358	79677286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79677300_79679400
transcript_8835.known	chr1	-	2095	5	FSM	ENSG00000280670.3	ENST00000629482.3	2095	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	8.74642784226795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	-4	True	NA	60	True	ATTAAA	-18	NA	45500073	45493865	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45495167_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_88361.known	chr18	+	3744	13	FSM	ENSG00000060069.18	ENST00000613122.5	3744	13	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_10	44.3961803912604	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	-16	True	NA	18	True	AATAAA	-15	NA	79679802	79754503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79736354_79736522_79753651
transcript_88362.nnic	chr18	+	3513	13	NNC	ENSG00000060069.18	novel	3744	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	88.5174182482371	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	-36	True	NA	18	True	AATAAA	-15	NA	79679782	79754503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_79680011_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79736354_79736522_79753651
transcript_88364.known	chr18	+	3228	12	FSM	ENSG00000060069.18	ENST00000591598.5	3228	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	86.9172685388119	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	278	False	NA	18	True	AATAAA	-15	NA	79680151	79754503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79753651
transcript_88365.known	chr18	+	3538	12	FSM	ENSG00000060069.18	ENST00000075430.11	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_10	64.1565749997806	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	27	True	NA	18	True	AATAAA	-15	NA	79679845	79754503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79736354_79736522_79753651
transcript_88373.nic	chr18	+	3440	11	NIC	ENSG00000060069.18	novel	3538	12	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	91.9532489909954	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCTTCTCGTGGG	NA	False	NA	14	True	AATAAA	-11	NA	79679772	79754499	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79753651
transcript_88387.known	chr18	-	2544	6	FSM	ENSG00000122490.19	ENST00000397778.7	2544	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	90.5008287254874	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTGGGCAGAGGGA	-3	True	NA	-1	True	AATAAA	-18	NA	79951653	79902419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79919183_79919401_79933968_79934023_79943328_79943463_79950723_79951026_79951580
transcript_88392.known	chr18	-	2475	5	FSM	ENSG00000122490.19	ENST00000357575.8	2475	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	57.3427196773924	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTGGGCAGAGGGA	12	True	NA	-1	True	AATAAA	-18	NA	79951638	79902419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79919183_79919401_79943328_79943463_79950723_79951026_79951580
transcript_88395.known	chr18	-	2319	5	FSM	ENSG00000122490.19	ENST00000474967.5	2319	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	77.7576362809467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACATTAAACTGTCGC	-7	True	NA	-55	True	NA	NA	NA	79951657	79902514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79943328_79943463_79949518_79949656_79950723_79951026_79951580
transcript_88399.known	chr18	-	1247	4	FSM	ENSG00000122490.19	ENST00000590381.5	1247	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	40.5709255502016	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCGGCTGTGCGGACGC	-3	True	NA	NA	False	GGGGCT	-22	NA	79951653	79903445	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79943328_79943463_79950723_79951026_79951580
transcript_88405.known	chr18	+	689	4	FSM	ENSG00000226742.4	ENST00000451882.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	6.59966329107444	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTATCTTTTTCTGGT	2	True	NA	19	True	AATAAA	-32	NA	79964642	79970822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79964787_79966611_79966679_79968088_79968184_79970439
transcript_88408.nic	chr18	-	1052	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	174	junction_2	610.975176800716	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTGCGTTTTGCAT	-28	True	NA	-3	True	AGTAAA	-19	NA	79988590	79973408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_88409.nic	chr18	-	948	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	174	junction_2	610.975176800716	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	-28	True	NA	-25	True	AATAAA	-20	NA	79988590	79973512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_88412.known	chr18	-	3472	3	FSM	ENSG00000141759.15	ENST00000269601.10	3472	3	0	0	0	0	multi-exon	FALSE	canonical	3	1382	junction_2	48	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTAAGTTTATTGTAT	-1	True	NA	-18	True	GATAAA	-15	NA	79988563	79970812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79973857_79977597_79977702_79988239
transcript_88413.known	chr18	-	1185	3	FSM	ENSG00000141759.15	ENST00000585474.5	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAATAGGAGAGCTAT	-18	True	NA	-6	True	AATAAA	-22	NA	80033949	79972874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79973857_79977597_79977702_80033850
transcript_88418.known	chr18	-	752	2	FSM	ENSG00000141759.15	ENST00000588162.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCGTTTTGCATAC	21	True	NA	-1	True	AGTAAA	-21	NA	79988541	79973406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79973857_79988239
transcript_88421.known	chr18	+	5590	7	FSM	ENSG00000101546.13	ENST00000306735.10	5590	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	21.1141079744221	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATACTTTCTTTTT	-1	True	NA	111	True	AATAAA	-22	NA	80034433	80050651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211_80044286_80045773
transcript_88425.nic	chr18	+	2872	6	ISM	ENSG00000101546.13	ENST00000306735.10	5590	7	-48	4254	-3	0	intron_retention	FALSE	canonical	3	101	junction_1	21.7310837281531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	488	False	NA	25	True	ATTAAA	-36	NA	80034385	80046397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211
transcript_88426.known	chr18	+	1219	6	FSM	ENSG00000101546.13	ENST00000262197.7	1219	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	49.8678252984828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	-10	True	NA	25	True	ATTAAA	-36	NA	80034465	80046397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80044211_80044286_80045773
transcript_88427.nic	chr18	+	2437	6	NIC	ENSG00000101546.13	novel	5590	7	NA	NA	-58	0	intron_retention	FALSE	canonical	3	101	junction_1	17.7921330930274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	433	False	NA	25	True	ATTAAA	-36	NA	80034330	80046397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_80034654_80036667_80036711_80037329_80038618_80042134_80042220_80044211_80044286_80045773
transcript_88429.known	chr18	+	880	4	FSM	ENSG00000101544.9	ENST00000560752.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	63.9808999276781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAACATATTAAGAGGAC	19	False	NA	NA	False	NA	NA	NA	80109292	80136166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80109473_80117529_80117585_80133102_80133193_80135611
transcript_88431.known	chr18	+	5157	4	FSM	ENSG00000101544.9	ENST00000262198.9	5157	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	7.34846922834953	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTGTTTAATTCTTTT	-12	True	NA	76	True	ATTAAA	-21	NA	80109261	80140346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80109473_80117529_80117651_80133102_80133193_80135611
transcript_88434.nnic	chr18	-	3122	4	NNC	ENSG00000178184.16	novel	3836	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9228430488243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAATATTTCACCTGT	-19	True	NA	19	True	AATAAA	-29	NA	80247534	80157231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_-_80158586_80159319_80160607_80202709_80202933_80247276
transcript_88438.known	chr18	-	3836	3	FSM	ENSG00000178184.16	ENST00000353265.8	3836	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	25.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAATATTTCACCTGT	1	True	NA	19	True	AATAAA	-29	NA	80247514	80157231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_80160607_80202709_80202933_80247276
transcript_88443.known	chr19	-	714	2	FSM	ENSG00000282458.1	ENST00000631796.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	1	True	NA	NA	False	TATAAA	-16	NA	70963	65821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_66500_70927
transcript_88448.known	chr19	-	1397	6	FSM	ENSG00000141934.10	ENST00000327790.7	1397	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	327.865582213199	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGTGCTTCTGTTCCTT	211	False	NA	-2	True	AGTAAA	-25	NA	291185	281039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_290951
transcript_88449.known	chr19	-	850	6	FSM	ENSG00000141934.10	ENST00000633125.1	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	333.025524547294	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGTCACTGACGTT	-2	True	NA	NA	False	NA	NA	NA	291398	281462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291288
transcript_88450.known	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	320.72318282282	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	3	True	NA	-5	True	AGTAAA	-22	NA	291393	281042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
transcript_8847.known	chr1	-	1234	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3249.31176712854	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	3238	False	NA	-20	True	ATTAAA	-28	NA	45521938	45511035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
transcript_88470.nic	chr19	-	2914	15	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	-9	0	intron_retention	FALSE	canonical	2	7	junction_11	88.0944819787371	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-18	True	NA	-3	True	ATTAAA	-18	NA	344824	305572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_330263_330381_334399_334543_336082_336174_344773
transcript_88487.known	chr19	-	2769	14	FSM	ENSG00000105556.12	ENST00000264819.7	2769	14	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_13	31.2832072085718	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	10	True	NA	-3	True	ATTAAA	-18	NA	344796	305572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_344773
transcript_8849.known	chr1	-	945	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	7805	junction_5	167.765789122813	5467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	1	True	NA	-35	True	ATTAAA	-13	NA	45521884	45511050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
transcript_88491.nic	chr19	-	2776	14	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	24	junction_3	67.0092283673714	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-18	True	NA	-3	True	ATTAAA	-18	NA	344824	305572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_306712_307118_307537_308576_308666_308821_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_344773
transcript_88498.nic	chr19	-	2706	13	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	27	junction_12	65.4133757133984	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-18	True	NA	-3	True	ATTAAA	-18	NA	344824	305572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_344773
transcript_8850.known	chr1	-	1107	6	FSM	ENSG00000117450.15	ENST00000447184.6	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_5	3053.83421946903	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	3238	False	NA	NA	False	NA	NA	NA	45521938	45510913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521857
transcript_8852.known	chr1	-	1296	6	FSM	ENSG00000117450.15	ENST00000424390.2	1296	6	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_5	2988.67859764144	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	2129	False	NA	NA	False	NA	NA	NA	45523047	45510913	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45522777
transcript_88522.known	chr19	-	3099	2	FSM	ENSG00000183186.8	ENST00000332235.8	3099	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGGTGGAGGTTGGCT	-2	True	NA	-19	True	AATAAA	-14	NA	409147	405444	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_408402_409005
transcript_88525.nnic	chr19	-	1761	4	Fusion	ENSG00000266933.2_ENSG00000181781.10	novel	1393	3	NA	NA	16181	0	multi-exon	FALSE	canonical	2	2	junction_1	3.55902608401044	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTACTCATTTAAT	NA	False	NA	NA	False	AATAAA	-32	NA	491652	463345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr19_-_464365_467648_467763_490246_490354_491131
transcript_88526.known	chr19	+	1541	5	FSM	ENSG00000099866.16	ENST00000215637.8	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.8405728739343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGTGTCAGTTTTCTCA	1	True	NA	24	True	AATAAA	-16	NA	496485	505343	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_496552_497832_498118_498495_498826_501668_501930_504744
transcript_88528.known	chr19	+	1309	4	FSM	ENSG00000099866.16	ENST00000346144.8	1309	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAACGTGTCAGTTTTC	7294	False	NA	21	True	AATAAA	-13	NA	496453	505340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_496552_497832_498118_498495_498826_504744
transcript_88533.known	chr19	+	1114	2	FSM	ENSG00000141933.9	ENST00000359315.6	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGTGTGTATGCGAGCG	-1	True	NA	6	True	AATAAA	-18	NA	507496	519654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_507845_518888
transcript_88534.known	chr19	+	2873	1	FSM	ENSG00000141933.9	ENST00000588278.1	2873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAAGC	2	True	NA	NA	False	NA	NA	NA	507499	510372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_507500_510400
transcript_88539.nnic	chr19	+	1076	5	NNC	ENSG00000099804.9	novel	1418	5	NA	NA	-48	2321	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_4	741.261214080435	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTGTGGGCCAACACAC	13	False	NA	12	True	AATAAA	-27	NA	531711	539036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_532109_535836_535924_536242_536341_537012_537148_538677
transcript_88540.known	chr19	+	1147	5	FSM	ENSG00000099804.9	ENST00000586283.6	1147	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	765.47971070434	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGTGCTTGGGAGG	273	False	NA	41	True	AATAAA	-20	NA	532031	542092	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541342
transcript_88543.nic	chr19	+	2138	4	NIC	ENSG00000099804.9	novel	1418	5	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	1642	junction_3	86.1561889180858	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGAAGCTGTGCTTG	13	False	NA	36	True	AATAAA	-15	NA	531711	542087	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_532109_535836_535924_536242_537148_541338
transcript_88544.known	chr19	+	924	5	FSM	ENSG00000197540.8	ENST00000264553.6	924	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCCTGAGTCCCAGCCC	0	True	NA	NA	False	AATAAA	-23	NA	544052	549922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_544127_547279_547437_548541_548678_548921_549186_549629
transcript_88546.known	chr19	+	1946	9	FSM	ENSG00000172270.22	ENST00000333511.9	1946	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3708.19416124615	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	-1	True	NA	24	True	AATAAA	-24	NA	572595	583493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_577773_578122_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_88547.known	chr19	+	1795	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	2962.07784213331	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	8765	False	NA	24	True	AATAAA	-24	NA	571276	583493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_88559.known	chr19	+	1519	8	FSM	ENSG00000172270.22	ENST00000618112.4	1519	8	0	0	0	0	multi-exon	FALSE	canonical	2	130	junction_3	2975.78090591361	16895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	38	False	NA	-6	True	NA	NA	NA	572634	583463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580655_580783_581314_581592_582305_582331_582513_582583_582749
transcript_88572.known	chr19	+	1605	7	FSM	ENSG00000172270.22	ENST00000346916.9	1605	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3177.90889055471	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	8	True	NA	24	True	AATAAA	-24	NA	571309	583493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_571580_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_88588.known	chr19	+	2314	7	FSM	ENSG00000172270.22	ENST00000576925.4	2314	7	0	0	0	0	multi-exon	FALSE	canonical	3	8064	junction_6	332.628630090008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	10	True	NA	-6	True	NA	NA	NA	572571	583463	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_579499_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_88601.known	chr19	-	509	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	40	493	-6	-101	multi-exon	FALSE	canonical	3	77	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGCTCTCGCTAGA	-5	True	NA	-8	True	NA	NA	NA	571734	567310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_567625_571439_571597_571696
transcript_88605.known	chr19	-	721	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	12	0	8	0	multi-exon	FALSE	canonical	3	85	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTAATTGCGAGAATG	15	True	NA	-7	True	NA	NA	NA	571745	567209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_567625_571439
transcript_88609.known	chr19	+	1630	8	FSM	ENSG00000172270.22	ENST00000680065.1	1630	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3038.15017564898	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGATCGCCCCCAC	1003	False	NA	-7	True	NA	NA	NA	572528	583462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582579_582749
transcript_88610.known	chr19	-	625	3	FSM	ENSG00000267751.6	ENST00000588908.6	1041	3	18	398	-8	-11	multi-exon	FALSE	canonical	3	10	junction_1	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGACGTCATGAATTAA	-7	True	NA	-18	True	NA	NA	NA	571736	567220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_567649_571439_571597_571696
transcript_88611.known	chr19	+	545	5	FSM	ENSG00000172270.22	ENST00000573216.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	3727.87824204332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATTGAGAACCTGAACA	10	True	NA	NA	False	NA	NA	NA	572571	581376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_579523_579657_580378_580462_580645_580783_581314
transcript_88612.known	chr19	+	1329	6	FSM	ENSG00000172270.22	ENST00000618006.4	1329	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	3407.47575780078	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	22	False	NA	18	True	AATAAA	-18	NA	572618	583487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_88631.nnic	chr19	-	3776	21	NNC	ENSG00000099821.14	novel	3771	21	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	196.005937410069	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	NA	False	NA	-32	True	AATAAA	-19	NA	633623	617223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619688_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_88639.nic	chr19	-	4013	21	NIC	ENSG00000099821.14	novel	3771	21	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	200.714473817909	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	-17	True	NA	-32	True	AATAAA	-19	NA	633555	617223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633197
transcript_8864.nic	chr1	+	1500	11	NIC	ENSG00000117448.14	novel	1818	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	282	junction_1	485.189911271865	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGCTTGCTTGTCTTA	NA	False	NA	25	True	AATAAA	-15	NA	45550769	45570047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_45550877_45550965_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_88640.known	chr19	-	3771	21	FSM	ENSG00000099821.14	ENST00000588649.7	3771	21	0	0	0	0	multi-exon	TRUE	canonical	3	732	junction_14	77.7839315025925	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGTCTTCAGGAAGGG	1	True	NA	-29	True	AATAAA	-22	NA	633537	617220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_88650.nnic	chr19	-	3824	21	NNC	ENSG00000099821.14	novel	3771	21	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_4	178.038450903169	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	41	False	NA	-32	True	AATAAA	-19	NA	633572	617223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_617324_617418_617481_617569_617656_617776_617871_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_8868.known	chr1	+	1360	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	383.652910265979	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550782	45570048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_8871.known	chr1	+	1818	10	FSM	ENSG00000117448.14	ENST00000372070.7	1818	10	0	0	0	0	multi-exon	TRUE	canonical	3	398	junction_2	428.298816882804	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550542	45570049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_88748.known	chr19	+	1311	3	FSM	ENSG00000070388.12	ENST00000215530.7	1329	3	16	2	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTGGTCTTTTGTTA	22	False	NA	4	True	AATAAA	-15	NA	639894	644371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_640140_643234_643339_643409
transcript_88749.known	chr19	+	1288	3	FSM	ENSG00000070388.12	ENST00000586042.6	1288	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTGGTCTTTTGTTA	22	False	NA	4	True	AATAAA	-15	NA	639894	644371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_640140_643234_643339_643432
transcript_88750.known	chr19	+	1712	1	FSM	ENSG00000070388.12	ENST00000591390.1	1712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTGAATGACGTG	6	False	NA	NA	False	NA	NA	NA	639878	641590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_639900_641600
transcript_88756.known	chr19	-	1631	9	FSM	ENSG00000070423.18	ENST00000292363.10	1631	9	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_5	77.3239936888932	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTGGCTTTCCT	-4	True	NA	-3	True	AATACA	-17	NA	663214	647525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651856_652232_652297_652825_652885_663046
transcript_88757.known	chr19	-	1671	9	FSM	ENSG00000070423.18	ENST00000605891.5	1671	9	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	330.813556818641	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTGGCTTTCCT	16	True	NA	-3	True	AATACA	-17	NA	663194	647525	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651916_652232_652297_652825_652885_663046
transcript_88759.known	chr19	-	963	9	FSM	ENSG00000070423.18	ENST00000589762.5	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	284.421534654112	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCACGTCGGCCGTC	-23	True	NA	NA	False	NA	NA	NA	663233	648131	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651691_651856_652232_652297_652825_652885_663046
transcript_8876.known	chr1	+	1407	9	FSM	ENSG00000117448.14	ENST00000351829.9	1407	9	0	0	0	0	multi-exon	FALSE	canonical	3	916	junction_1	211.735684285857	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	-7	True	NA	27	True	AATAAA	-17	NA	45550825	45570049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_88801.known	chr19	-	733	4	FSM	ENSG00000070423.18	ENST00000591394.2	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_1	86.3751507475771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGCCAGGCCCACGTG	25	True	NA	NA	False	NA	NA	NA	663185	651384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_651856_652232_652297_652825_652885_663046
transcript_88805.known	chr19	-	652	2	FSM	ENSG00000070423.18	ENST00000592626.3	652	2	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCTGGCGCATGGGGG	39	True	NA	NA	False	NA	NA	NA	663171	652357	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_652885_663046
transcript_88808.known	chr19	+	2144	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	791	False	NA	8	True	AATAAA	-15	NA	680706	683392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_680880_681332_681561_681649
transcript_88809.known	chr19	+	2891	9	FSM	ENSG00000099864.18	ENST00000338448.10	2891	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	14.6196571437226	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGGAGTTCTTGCCTT	-8	True	NA	18	True	AATAAA	-18	NA	708934	748329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172_734195_736018_736079_740351_740484_746284
transcript_88810.known	chr19	+	2755	8	FSM	ENSG00000099864.18	ENST00000264560.11	2755	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.41774269934258	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGGAGTTCTTGCCTT	-4	True	NA	18	True	AATAAA	-18	NA	708938	748329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172_734195_736018_736079_746284
transcript_88811.known	chr19	+	2885	5	FSM	ENSG00000099812.9	ENST00000215582.8	2885	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.6583123951777	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTCCCTGCCTGGT	-1	True	NA	NA	False	AATAAA	-17	NA	751111	764318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_751172_756889_758727_759908_760040_761624_761664_763500
transcript_88813.known	chr19	+	1023	2	FSM	ENSG00000267530.4	ENST00000606242.3	1045	2	0	22	0	-22	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACCACTTGTTACCTC	-35	True	NA	NA	False	NA	NA	NA	782762	785269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_783331_784814
transcript_88817.known	chr19	+	3206	15	FSM	ENSG00000011304.22	ENST00000356948.11	3206	15	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_9	225.320146385863	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	1	True	NA	25	True	AATAAA	-15	NA	797451	812312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_88821.known	chr19	+	3185	15	FSM	ENSG00000011304.22	ENST00000394601.8	3185	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	469.833665747132	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	1	True	NA	25	True	AATAAA	-15	NA	797451	812312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805512_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_88836.known	chr19	+	3155	14	FSM	ENSG00000011304.22	ENST00000349038.8	3155	14	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_8	334.317320828457	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	9	False	NA	25	True	AATAAA	-15	NA	797424	812312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_88839.known	chr19	+	3691	14	FSM	ENSG00000011304.22	ENST00000635647.1	3691	14	0	0	0	0	multi-exon	TRUE	canonical	3	1161	junction_8	232.911136773526	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTGGCTTCCTCTTTC	NA	False	NA	40	True	AATAAA	-30	NA	797074	812327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_88864.known	chr19	+	1556	9	FSM	ENSG00000011304.22	ENST00000592804.2	1556	9	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_8	214.491513526759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGGCATGGGCGCGCAT	NA	False	NA	NA	False	NA	NA	NA	797397	806055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491
transcript_88869.known	chr19	+	749	8	FSM	ENSG00000011304.22	ENST00000589575.5	749	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	620.677674409354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACGGGCAGAACATCTACA	11	False	NA	NA	False	NA	NA	NA	797461	805017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804540_804703_804828_804940_805012
transcript_88878.known	chr19	+	3069	14	FSM	ENSG00000011304.22	ENST00000350092.8	3069	14	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_8	233.057881933568	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTCTAGCCCTGTGT	1955	False	NA	28	True	ATTAAA	-18	NA	799405	812222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_88879.known	chr19	-	2306	8	FSM	ENSG00000129951.19	ENST00000520876.8	2306	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_7	80.3487297183156	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGGCTCTTGGTCATTC	1	True	NA	-23	True	AATAAA	-15	NA	821955	812487	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
transcript_88881.nnic	chr19	+	1735	4	NNC	ENSG00000172232.10	novel	1713	4	NA	NA	-3057	0	intron_retention	FALSE	canonical	1	1	junction_2	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGTTTCTGTTCATTG	6108	False	NA	7	True	AATAAA	-20	NA	822039	832017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_822163_828229_828387_829561_829707_830707
transcript_88882.known	chr19	+	1036	4	FSM	ENSG00000196415.10	ENST00000544537.2	1036	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCCTGTCTGTCCT	18	False	NA	NA	False	AATAAA	-13	NA	843340	848175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_843627_843892_844035_846146_846378_847798
transcript_88884.known	chr19	+	1191	5	FSM	ENSG00000197766.8	ENST00000327726.11	1191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.2915619758885	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGTAATCCCAGCACTT	0	True	NA	NA	False	NA	NA	NA	859663	863641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_859745_860616_860774_860860_861006_861698_861957_863091
transcript_88886.known	chr19	-	3420	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	0	0	0	0	multi-exon	TRUE	canonical	3	264	junction_5	52.3360413528746	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	-7	True	NA	NA	False	NA	NA	NA	893218	867629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_88888.nic	chr19	-	2886	14	NIC	ENSG00000175221.16	novel	2892	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_11	108.62072333796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	-4	True	NA	-4	True	AATAAA	-16	NA	893187	867962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_890136_890245_890962_891150_893085
transcript_88889.nic	chr19	-	2908	14	NIC	ENSG00000175221.16	novel	2892	16	NA	NA	-28	0	intron_retention	FALSE	canonical	3	31	junction_6	106.053352655479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	NA	False	NA	-4	True	AATAAA	-16	NA	893246	867962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_88892.nnic	chr19	+	2597	4	NNC	ENSG00000197766.8	novel	809	5	NA	NA	985	5856	intron_retention	FALSE	canonical	1	2	junction_3	6.79869268479038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGACGTAACCGTCCT	-14	True	NA	14	True	ATTAAA	-26	NA	860648	869497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_860774_860860_861006_861698_861957_867428
transcript_88895.nic	chr19	-	2117	10	NIC	ENSG00000198858.10	novel	1803	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	315.49952554209	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	4434	False	NA	-7	True	AATAAA	-17	NA	913231	896502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_902241_902435_902518_902628_913086
transcript_88909.known	chr19	-	1765	8	FSM	ENSG00000198858.10	ENST00000587975.2	1765	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	242.147197601216	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGCTATGTGTGTTTT	4420	False	NA	-8	True	AATAAA	-16	NA	913245	896503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902068_913086
transcript_88911.known	chr19	-	1803	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	0	0	0	multi-exon	TRUE	canonical	3	588	junction_7	46.2839505836813	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-26	True	NA	-7	True	AATAAA	-17	NA	913219	896502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
transcript_88925.known	chr19	-	1704	7	FSM	ENSG00000198858.10	ENST00000589428.5	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	241.957985333542	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	4420	False	NA	-7	True	AATAAA	-17	NA	913245	896502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901975_902131_913086
transcript_88939.known	chr19	+	1624	5	FSM	ENSG00000116014.10	ENST00000234371.10	1624	5	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	3.69966214673719	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTAGTTGACTGTC	-1	True	NA	57	True	NA	NA	NA	917332	921005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_917747_918543_918669_919489_919626_919873_920107_920289
transcript_88962.nic	chr19	+	2466	9	NIC	ENSG00000116017.11	novel	1016	6	NA	NA	-121	166	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	48.1111993199089	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATATATATATATATA	8326	False	NA	NA	False	AAAAAG	-12	NA	925659	972221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_925921_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
transcript_88972.known	chr19	+	5948	9	FSM	ENSG00000116017.11	ENST00000263620.8	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	52.6270783437576	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGTGGTGTTTTTTT	11	True	NA	28	True	ATTAAA	-35	NA	926034	975939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_926060_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
transcript_88976.nnic	chr19	+	2418	9	NNC	ENSG00000116017.11	novel	5948	9	NA	NA	-50	166	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	47.8132761374913	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATATATATATATATA	229	False	NA	NA	False	AAAAAG	-12	NA	925984	972221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_926198_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
transcript_88997.known	chr19	+	1397	9	FSM	ENSG00000065268.11	ENST00000607440.5	1397	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	355.045771697115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	22	False	NA	27	True	NA	NA	NA	984357	994557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_984564_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
transcript_89.known	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1268	junction_3	641.557626016557	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
transcript_89002.known	chr19	+	1465	9	FSM	ENSG00000065268.11	ENST00000587001.6	1465	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	353.978724643163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	-4	True	NA	27	True	NA	NA	NA	984331	994557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994212
transcript_89033.known	chr19	-	2687	11	FSM	ENSG00000182087.14	ENST00000356663.8	2687	11	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_4	210.787096379261	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	9	True	NA	27	True	AATAAA	-17	NA	1021123	1009652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_89034.known	chr19	-	2753	11	FSM	ENSG00000182087.14	ENST00000593068.7	2753	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	513.45719393149	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGCTGTGTGTGTGTCTT	NA	False	NA	-26	True	AATAAA	-22	NA	1021179	1009647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1010896_1010990_1011096_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_89035.known	chr19	-	2581	10	FSM	ENSG00000182087.14	ENST00000333175.9	2581	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	439.942280164732	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCGCTGTGTGTGTGT	17	True	NA	-29	True	AATAAA	-19	NA	1021115	1009650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1010896_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_89045.known	chr19	+	2149	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	0	0	0	0	multi-exon	FALSE	canonical	3	3420	junction_6	186.293451307339	7750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGCCAAGAGAGTTG	-1	True	NA	30	True	AATAAA	-20	NA	1026607	1039065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
transcript_89046.known	chr19	+	2033	6	FSM	ENSG00000064666.15	ENST00000348419.7	2033	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	1412.34791747643	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	1	True	NA	33	True	AATAAA	-23	NA	1026609	1039068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415_1036563_1037624
transcript_89047.known	chr19	+	2109	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	1271.39342848703	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	9	True	NA	33	True	AATAAA	-23	NA	1026617	1039068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
transcript_89048.known	chr19	+	2194	7	FSM	ENSG00000064666.15	ENST00000562958.6	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	1379.24815469234	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	20	True	NA	33	True	AATAAA	-23	NA	1026628	1039068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036066_1036247_1036415_1036563_1037624
transcript_89049.known	chr19	+	1492	8	FSM	ENSG00000064666.15	ENST00000568865.3	1492	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	1638.84444107451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTTCCCCCAGGGG	22	True	NA	NA	False	AAGAAA	-3	NA	1026630	1038309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1036878_1037001_1037624
transcript_89051.known	chr19	+	6815	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	26.1429471598054	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	-23	True	NA	25	True	AATAAA	-33	NA	1040106	1065572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
transcript_89074.known	chr19	+	4272	23	FSM	ENSG00000180448.11	ENST00000313093.7	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	80.6544127591334	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	-2	True	NA	16	True	AATAAA	-16	NA	1067166	1086628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1067496_1068413_1068745_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
transcript_89076.known	chr19	+	4120	23	FSM	ENSG00000180448.11	ENST00000586866.5	4120	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.1378423249382	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	0	True	NA	16	True	AATAAA	-16	NA	1067497	1086628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1067675_1068413_1068745_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
transcript_89085.known	chr19	+	3750	22	FSM	ENSG00000180448.11	ENST00000543365.5	3750	22	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	69.6480950411219	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	-4	True	NA	16	True	AATAAA	-16	NA	1071220	1086628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1071359_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
transcript_89106.known	chr19	-	1214	8	FSM	ENSG00000099817.12	ENST00000591767.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1680.88871051681	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	20	True	NA	NA	False	AATAAA	-34	NA	1095336	1088147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093755_1093904_1095258
transcript_89107.known	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3537	junction_1	328.412632434955	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-19	True	NA	0	True	AATAAA	-22	NA	1095375	1086573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_89112.known	chr19	-	1286	8	FSM	ENSG00000099817.12	ENST00000215587.11	1286	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1414.70843610395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCGACTAACAAGGTTT	-18	True	NA	NA	False	AATAAA	-19	NA	1095374	1088162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088721_1089471_1089574_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_89113.known	chr19	-	1749	8	FSM	ENSG00000099817.12	ENST00000612655.4	1749	8	0	0	0	0	multi-exon	FALSE	canonical	2	70	junction_1	1392.224603625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAAAGGGACAAACACT	-24	True	NA	NA	False	NA	NA	NA	1095380	1087644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088682_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_89116.known	chr19	-	487	7	FSM	ENSG00000099817.12	ENST00000585838.2	487	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1761.38822302814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCACGGCTGCTGCTC	8493	False	NA	NA	False	NA	NA	NA	1095261	1088644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088714_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1095258
transcript_89117.known	chr19	-	932	7	FSM	ENSG00000099817.12	ENST00000619917.4	932	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1871.45460359939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGGCCCTCGGCCTTC	-10	True	NA	NA	False	NA	NA	NA	1095366	1088387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088721_1089489_1089552_1089883_1089963_1090086_1090146_1091791_1091908_1093903_1094079_1095258
transcript_89136.known	chr19	-	685	3	FSM	ENSG00000099817.12	ENST00000591709.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	4268	junction_1	99	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGCCGGAGGTTCTT	-5	True	NA	NA	False	NA	NA	NA	1095361	1091500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1091908_1093903_1094079_1095258
transcript_89137.known	chr19	+	1563	3	FSM	ENSG00000180448.11	ENST00000592297.2	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	-5	True	NA	-12	True	NA	NA	NA	1082840	1086600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1083354_1084237_1084347_1085659
transcript_89138.known	chr19	+	3218	13	FSM	ENSG00000180448.11	ENST00000590577.2	3218	13	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	24.9815209482707	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	91	False	NA	16	True	AATAAA	-16	NA	1077486	1086628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
transcript_89140.known	chr19	+	924	8	NNC	ENSG00000167468.19	novel	851	7	NA	NA	-68	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1419.33373274151	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	NA	False	NA	21	True	AATAAA	-21	NA	1103925	1106787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1104128_1105185_1105281_1105365_1105403_1105405_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_89143.known	chr19	+	1002	8	NNC	ENSG00000167468.19	novel	536	6	NA	NA	-56	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1735.99694347516	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	-10	True	NA	21	True	AATAAA	-21	NA	1104649	1106787	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1104930_1105185_1105281_1105365_1105403_1105405_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_89146.known	chr19	+	803	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	1470.30971793927	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCGTAGGGGCTTG	9	True	NA	22	True	AATAAA	-22	NA	1104072	1106788	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
transcript_89147.known	chr19	+	793	7	FSM	ENSG00000167468.19	ENST00000611653.4	793	7	0	0	0	0	multi-exon	FALSE	canonical	3	3622	junction_1	229.609572003337	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	-12	True	NA	13	True	AATAAA	-13	NA	1104051	1106779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_89156.known	chr19	+	812	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	1615.49665428313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	14	False	NA	13	True	AATAAA	-13	NA	1104007	1106779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
transcript_89161.known	chr19	+	1184	5	FSM	ENSG00000167468.19	ENST00000592940.2	1184	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1792.08760946556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTAGGGGCTTGGGG	372	False	NA	25	True	AATAAA	-25	NA	1105155	1106791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1105281_1105365_1105511_1105664_1106267_1106399_1106460_1106539
transcript_89163.known	chr19	-	4906	32	FSM	ENSG00000064932.16	ENST00000361757.8	4906	32	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	9.22952778545901	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGAGTCTGCTCCTCA	-11	True	NA	-7	True	AATATA	-19	NA	1174268	1107637	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1147308_1147421_1149368_1149443_1154183_1154403_1174171
transcript_89164.known	chr19	-	4537	29	FSM	ENSG00000064932.16	ENST00000438103.6	4537	29	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_28	13.5853312248835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGGAGTCTGCTCCTCAG	5	True	NA	-6	True	AATATA	-20	NA	1132221	1107636	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1132089
transcript_89172.known	chr19	-	2403	14	FSM	ENSG00000064932.16	ENST00000592222.5	2403	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	16.1842205275027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGGGAATCGCTTGAAC	5	True	NA	NA	False	NA	NA	NA	1132221	1115355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1132089
transcript_89180.nnic	chr19	+	2580	11	NNC	ENSG00000118046.17	novel	3293	10	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	175.462389132258	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTGAGGGGTGT	-14	True	NA	14	True	AATAAA	-13	NA	1205764	1228095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1205873_1206262_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1226453_1226664_1227592
transcript_89185.known	chr19	+	704	5	FSM	ENSG00000099624.8	ENST00000395633.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_4	336.318301613219	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	-40	True	NA	22	True	ATTAAA	-16	NA	1241745	1244825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244736
transcript_89186.known	chr19	+	995	4	FSM	ENSG00000099624.8	ENST00000215375.7	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_3	48.2861838992849	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	-35	True	NA	22	True	ATTAAA	-16	NA	1241750	1244825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314
transcript_89190.known	chr19	+	1587	1	FSM	ENSG00000099624.8	ENST00000592624.1	1587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAGAAACTGA	-18	True	NA	NA	False	NA	NA	NA	1241767	1243354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1241800_1243400
transcript_89191.known	chr19	+	1393	3	FSM	ENSG00000099624.8	ENST00000588538.5	1393	3	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_2	26	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	31	True	NA	22	True	ATTAAA	-16	NA	1241816	1244825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1242610_1244096_1244186_1244314
transcript_89192.known	chr19	+	637	5	FSM	ENSG00000099624.8	ENST00000591660.5	637	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	657.201643333308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCCCCCGCCCCAT	34	True	NA	-17	True	NA	NA	NA	1241819	1244786	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244690
transcript_89195.known	chr19	+	3243	7	FSM	ENSG00000167470.14	ENST00000591446.7	3261	7	18	0	18	0	multi-exon	FALSE	canonical	3	74	junction_4	13.9363633069112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTGTAAATTTTTTTGTG	5	True	NA	-57	True	NA	NA	NA	1249887	1258699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1250530_1251561_1251650_1251838_1251902_1254166_1254479_1254901_1255062_1255421_1255695_1256994
transcript_89199.nic	chr19	+	3751	7	ISM	ENSG00000167470.14	ENST00000682408.1	3892	9	2071	331	-607	113	3prime_fragment	FALSE	canonical	3	47	junction_2	25.4863798048204	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAAAAAAGGAGTAAAA	771	False	NA	-7	True	AAAAAG	-10	NA	1250653	1258812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_1251650_1251838_1251902_1253953_1254083_1254166_1254479_1254901_1255062_1255421_1255695_1256994
transcript_89201.nic	chr19	+	3622	6	ISM	ENSG00000167470.14	ENST00000591446.7	3261	7	784	-113	-607	113	3prime_fragment	FALSE	canonical	3	74	junction_3	15.2656477098091	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAAAAAAGGAGTAAAA	771	False	NA	-7	True	AAAAAG	-10	NA	1250653	1258812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_1251650_1251838_1251902_1254166_1254479_1254901_1255062_1255421_1255695_1256994
transcript_8921.known	chr1	+	1018	4	FSM	ENSG00000117448.14	ENST00000471651.1	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	916	junction_1	257.638420185258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAAGGCGGGCGGATCA	10	True	NA	NA	False	NA	NA	NA	45551067	45567588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868
transcript_89219.known	chr19	+	938	8	FSM	ENSG00000099622.14	ENST00000586636.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_6	421.221304963438	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCGCACGAGTAGGACC	14	False	NA	88	True	AAGAAA	-17	NA	1269346	1274880	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
transcript_89220.nic	chr19	+	2551	8	NIC	ENSG00000099622.14	novel	1052	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	89	junction_6	450.276966920112	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-5	True	NA	18	True	AATAAA	-23	NA	1269327	1274810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1273716_1274306_1274441_1274648
transcript_89225.known	chr19	+	1303	7	FSM	ENSG00000099622.14	ENST00000586472.5	1303	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	435.605612911496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	5513	False	NA	NA	False	ATTAAA	-18	NA	1266652	1273172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1266702_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_89227.known	chr19	+	1459	7	FSM	ENSG00000099622.14	ENST00000588090.5	1459	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	436.332983193137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	383	False	NA	NA	False	ATTAAA	-18	NA	1267087	1273172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1267293_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_89229.known	chr19	+	1328	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_6	96.3213660386705	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	4	True	NA	NA	False	ATTAAA	-18	NA	1269336	1273172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_89230.known	chr19	+	1073	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_6	370.582724308022	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	17	False	NA	18	True	AATAAA	-23	NA	1269349	1274810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_89233.nic	chr19	+	3142	7	NIC	ENSG00000099622.14	novel	938	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	333	junction_6	322.155759429089	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-5	True	NA	18	True	AATAAA	-23	NA	1269327	1274810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1274441_1274648
transcript_89234.known	chr19	+	870	7	FSM	ENSG00000099622.14	ENST00000585630.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	398.235971364829	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGACCGCTTCTGA	2561	False	NA	55	True	NA	NA	NA	1269265	1272582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_89235.known	chr19	+	942	7	FSM	ENSG00000099622.14	ENST00000586773.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	492.492103715605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCGCCTGGAGCCCG	-6	True	NA	NA	False	NA	NA	NA	1269326	1274595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_89238.known	chr19	+	1606	6	FSM	ENSG00000099622.14	ENST00000413636.6	1606	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	478.218109234688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	-1	True	NA	NA	False	ATTAAA	-18	NA	1269331	1273172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271366_1271550_1271633_1271980
transcript_89239.known	chr19	+	3346	6	FSM	ENSG00000099622.14	ENST00000587896.6	3346	6	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_2	11.1892805845595	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-1	True	NA	18	True	AATAAA	-23	NA	1269331	1274810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_89241.known	chr19	+	928	6	FSM	ENSG00000099622.14	ENST00000591055.5	928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	461.327215759053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTGGGTGCCCCACTC	15	False	NA	NA	False	NA	NA	NA	1269347	1272803	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271366_1271550_1271633_1271980_1272052_1272426
transcript_89244.known	chr19	+	3028	6	FSM	ENSG00000099622.14	ENST00000587169.5	3028	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	486.901797080274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	2	True	NA	18	True	AATAAA	-23	NA	1269334	1274810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1274441_1274648
transcript_89245.known	chr19	+	1835	6	FSM	ENSG00000099622.14	ENST00000589710.5	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	435.914945832326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	2561	False	NA	NA	False	ATTAAA	-18	NA	1269265	1273172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_89254.known	chr19	+	769	2	FSM	ENSG00000099622.14	ENST00000589161.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGCAAGATGCAACAT	681	False	NA	NA	False	NA	NA	NA	1261820	1264698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1262144_1264252
transcript_89255.known	chr19	-	1356	2	FSM	ENSG00000267493.4	ENST00000585832.3	1356	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCCTAGTTATTAAG	5537	False	NA	-3	True	NA	NA	NA	1270260	1267470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1268391_1269824
transcript_89257.known	chr19	+	1052	9	FSM	ENSG00000099622.14	ENST00000585914.5	1052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	565.450484127479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGATTCGAATAAAGGGCC	19	False	NA	-19	True	NA	NA	NA	1269351	1274773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1273493_1273716_1274306_1274445_1274648
transcript_89258.known	chr19	+	668	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	129	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	3	True	NA	40	True	AATAAA	-35	NA	1276020	1279244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1276104_1277182_1277300_1278776
transcript_89259.nnic	chr19	+	754	3	NNC	ENSG00000228300.14	novel	751	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	186	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	42	False	NA	24	True	AATAAA	-19	NA	1276092	1279228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1276278_1277182_1277300_1278776
transcript_89261.known	chr19	+	751	3	FSM	ENSG00000228300.14	ENST00000590269.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	191.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	-8	True	NA	NA	False	NA	NA	NA	1276099	1278836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1276674_1277182_1277300_1278776
transcript_89262.known	chr19	+	1675	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	42	False	NA	40	True	AATAAA	-35	NA	1276092	1279244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1277300_1278776
transcript_89263.known	chr19	+	870	3	FSM	ENSG00000228300.14	ENST00000409293.6	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	91.5	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	-17	True	NA	24	True	AATAAA	-19	NA	1275529	1279228	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1275831_1277182_1277300_1278776
transcript_8927.known	chr1	+	775	3	FSM	ENSG00000117448.14	ENST00000496999.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	608.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGCAGTCTCACATG	13	True	NA	NA	False	NA	NA	NA	45550845	45567213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45566568_45566689_45566868
transcript_89280.nic	chr19	+	2610	14	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	100.004496940308	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	-30	True	NA	17	True	NA	NA	NA	1354953	1376917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_89281.nic	chr19	+	4122	14	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	147	junction_1	100.004496940308	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGTCTTTTCTGAA	-30	True	NA	14	True	ATTAAA	-14	NA	1354953	1378429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_89288.known	chr19	+	4232	14	FSM	ENSG00000160953.17	ENST00000591337.7	4232	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	93.66539969803	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGTCTTTTCTGAA	-25	True	NA	14	True	ATTAAA	-14	NA	1354958	1378429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1355136_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_89298.nic	chr19	+	2471	13	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	129.73635124102	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	-17	True	NA	17	True	NA	NA	NA	1354966	1376917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1355021_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_89299.nic	chr19	+	3983	13	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	38	junction_1	129.73635124102	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGTCTTTTCTGAA	-17	True	NA	14	True	ATTAAA	-14	NA	1354966	1378429	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1355021_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_89324.known	chr19	+	1513	4	FSM	ENSG00000160953.17	ENST00000590866.2	1513	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	142.663551367856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	-12	True	NA	NA	False	NA	NA	NA	1354971	1359894	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1355021_1357008_1357095_1358393_1358465_1358587
transcript_89325.known	chr19	+	522	3	FSM	ENSG00000160953.17	ENST00000592374.6	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	1354710	1357094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1355021_1356323_1356450_1357008
transcript_89328.nic	chr19	+	1480	3	ISM	ENSG00000160953.17	ENST00000591337.7	4232	14	19	20225	6	1110	5prime_fragment	FALSE	canonical	3	177	junction_1	122	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACCAGGGTTCTTGC	-6	True	NA	NA	False	TTTAAA	-44	NA	1354977	1358204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_1355136_1356323_1356450_1357008
transcript_89337.known	chr19	+	630	7	FSM	ENSG00000115286.21	ENST00000538929.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	516.93380190848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTAGGGCCGGGACCGC	146	False	NA	NA	False	GGGGCT	-33	NA	1384050	1393326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1384157_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
transcript_89338.known	chr19	+	2818	7	FSM	ENSG00000115286.21	ENST00000313408.11	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	166.295920976232	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	-1	True	NA	25	True	AATAAA	-18	NA	1383903	1395581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
transcript_89339.known	chr19	+	758	8	FSM	ENSG00000115286.21	ENST00000233627.14	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	154.017359212446	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	2	True	NA	28	True	AATAAA	-21	NA	1383906	1395584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_89340.known	chr19	+	3089	6	FSM	ENSG00000115286.21	ENST00000545446.5	3089	6	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	176.751803385425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	282	False	NA	28	True	AATAAA	-21	NA	1383874	1395584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388939_1390870_1391051_1391118_1391166_1393241
transcript_89341.known	chr19	+	1743	8	FSM	ENSG00000115286.21	ENST00000539480.5	1743	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	490.20782764631	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	-5	True	NA	33	True	AATAAA	-26	NA	1383899	1395589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
transcript_89342.known	chr19	+	869	9	FSM	ENSG00000115286.21	ENST00000546172.7	869	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	595.807802483318	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	13	True	NA	28	True	AATAAA	-21	NA	1383917	1395584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1386517_1386640_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_89344.known	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	41.581726755872	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-13	True	NA	50	True	NA	NA	NA	1401542	1397025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_89347.known	chr19	-	1769	5	FSM	ENSG00000130005.13	ENST00000447102.8	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	25.4460212999989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGGTGTGATTCTTTG	-41	True	NA	-2	True	NA	NA	NA	1401570	1397810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_89353.nnic	chr19	-	928	4	NIC	ENSG00000130005.13	novel	1769	5	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	32	junction_2	183.144751494549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCTGGGCGTGGTGGCGT	7314	False	NA	-10	True	AATACA	-6	NA	1401585	1398602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1399027_1399127_1399196_1399792_1399939_1401295
transcript_8936.known	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_5	629.410450585405	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	-2	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_89360.known	chr19	+	2290	13	FSM	ENSG00000071626.17	ENST00000336761.10	2290	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	398.705640165774	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	8	True	NA	31	True	AATAAA	-24	NA	1407568	1435684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1433738_1433828_1434736
transcript_89375.known	chr19	+	2086	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	253.84761486027	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	16	False	NA	30	True	AATAAA	-23	NA	1407679	1435683	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
transcript_89401.known	chr19	+	3642	1	FSM	ENSG00000071626.17	ENST00000589874.2	3642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	1789	False	NA	31	True	AATAAA	-24	NA	1432042	1435684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1432000_1435700
transcript_89403.known	chr19	+	711	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7788.01978602392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	8	True	NA	29	True	AATAAA	-17	NA	1438405	1440494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
transcript_89406.known	chr19	+	550	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7397.27739704879	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	2	True	NA	25	True	AATAAA	-13	NA	1438399	1440490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
transcript_89407.known	chr19	+	467	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	7371.46287305911	4500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	24	False	NA	29	True	AATAAA	-17	NA	1438421	1440494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
transcript_89408.known	chr19	+	629	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_1	8019.88263976198	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	21	False	NA	29	True	AATAAA	-17	NA	1438418	1440494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
transcript_89409.known	chr19	+	570	3	FSM	ENSG00000115268.10	ENST00000586096.3	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	13469	junction_1	2575.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	23	False	NA	29	True	AATAAA	-17	NA	1438420	1440494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1440018
transcript_89410.known	chr19	+	1602	3	FSM	ENSG00000115268.10	ENST00000592700.2	1602	3	0	0	0	0	multi-exon	FALSE	canonical	3	13469	junction_1	1892	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	22	False	NA	29	True	AATAAA	-17	NA	1438419	1440494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1440254_1440348
transcript_89412.known	chr19	+	873	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	17253	junction_2	683.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	3	True	NA	29	True	AATAAA	-17	NA	1438400	1440494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_89413.nnic	chr19	+	1780	3	FSM	ENSG00000268798.1_ENSG00000115268.10	ENST00000592623.5	873	3	406	-1313	385	-131	multi-exon	FALSE	canonical	3	17253	junction_2	683.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCTAACTGGGCATGGT	409	False	NA	NA	False	AATACA	-7	NA	1438806	1441807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_89414.nnic	chr19	+	1932	3	FSM	ENSG00000268798.1_ENSG00000115268.10	ENST00000592623.5	873	3	406	-1465	385	21	multi-exon	FALSE	canonical	3	17253	junction_2	683.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGATTTGCTCGTGTTCT	409	False	NA	NA	False	NA	NA	NA	1438806	1441959	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_89438.known	chr19	-	853	3	FSM	ENSG00000119559.17	ENST00000588427.5	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	173.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACACACTGCACCAGG	-4	True	NA	NA	False	NA	NA	NA	1479201	1461142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1461825_1478773_1478906_1479162
transcript_89441.known	chr19	-	1287	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	174.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCGTCTGAATGGTGC	14	True	NA	-12	True	CATAAA	-14	NA	1479183	1474173	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478773_1478906_1479113
transcript_89442.known	chr19	-	1265	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	187	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGAATGGTGCCTCTGT	16	True	NA	-6	True	CATAAA	-20	NA	1479181	1474167	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478773_1478906_1479139
transcript_89443.known	chr19	-	2243	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	35	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACGGTGTCGTCCTTAC	-18	True	NA	-3	True	ATTAAA	-18	NA	1479215	1473200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478773_1478906_1479162
transcript_89446.known	chr19	-	1524	3	FSM	ENSG00000119559.17	ENST00000651077.1	1524	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	173.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCGTCTGAATGGT	-18	True	NA	-14	True	CATAAA	-12	NA	1479215	1474175	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475515_1478773_1478906_1479162
transcript_89456.known	chr19	-	492	2	FSM	ENSG00000119559.17	ENST00000589421.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	415	False	NA	NA	False	AATGAA	-11	NA	1479134	1478434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1478906_1479113
transcript_89457.known	chr19	-	1410	3	FSM	ENSG00000119559.17	ENST00000427685.2	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	176.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-19	True	NA	7	True	CATAAA	-33	NA	1479216	1474154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478653_1478906_1479162
transcript_8946.known	chr1	+	1538	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	746.159540025856	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	22	False	NA	14	True	AATAAA	-14	NA	45584064	45618247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_89460.known	chr19	+	1360	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_4	32.4220218370169	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACGTGTGCGG	-4	True	NA	16	True	AATAAA	-17	NA	1491180	1497927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
transcript_89461.known	chr19	+	2061	15	FSM	ENSG00000185988.15	ENST00000642079.2	2061	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.626783170528009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGGTCTGCCTCTCTT	0	True	NA	15	True	ATTAAA	-20	NA	1524076	1535457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1524247_1525304_1525419_1525594_1525712_1526485_1526616_1526703_1526792_1526902_1526999_1527935_1528135_1528301_1528429_1528897_1528975_1529405_1529491_1529746_1529825_1531737_1531884_1533718_1533849_1533930_1534042_1535064
transcript_89463.known	chr19	+	2520	14	FSM	ENSG00000185988.15	ENST00000454744.7	2520	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.634323942402717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGGTGCACTCATGGAC	0	True	NA	NA	False	NA	NA	NA	1524076	1536046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1524247_1525304_1525419_1525594_1525712_1526485_1526616_1526703_1526792_1526902_1526999_1527935_1528135_1528301_1528429_1528897_1528975_1529405_1529491_1529746_1529825_1531737_1531884_1533930_1534042_1535064
transcript_89482.nnic	chr19	-	3101	7	NNC	ENSG00000071655.18	novel	5518	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	292.947520897515	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGAGCTTCTGTCTTTG	495	False	NA	-8	True	NA	NA	NA	1592375	1576639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1591564
transcript_89486.known	chr19	-	5678	7	FSM	ENSG00000071655.18	ENST00000434436.8	5678	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	255.475156435133	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGCCTGCCTTCCTTC	5	True	NA	-2	True	AATAAA	-17	NA	1592865	1573595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592521
transcript_89498.known	chr19	-	533	4	FSM	ENSG00000127540.12	ENST00000593029.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	2195.09974463323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	7	True	NA	-24	True	ATTAAA	-16	NA	1605443	1598048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1598216_1599411_1599561_1602293_1602427_1605359
transcript_89502.known	chr19	-	1299	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	4673	junction_1	32.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTACAAAGTCACACTC	-12	True	NA	-24	True	AATAAA	-24	NA	1605462	1597168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1598216_1599411_1599561_1605359
transcript_89505.known	chr19	-	753	2	FSM	ENSG00000127540.12	ENST00000585671.2	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	4738	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCTCTTACACCCCCA	-23	True	NA	NA	False	NA	NA	NA	1605473	1598921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1599561_1605359
transcript_89507.known	chr19	-	2379	6	FSM	ENSG00000071655.18	ENST00000592012.5	2379	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	314.672782426444	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGAGCTTCTGTCTTTG	7563	False	NA	-8	True	NA	NA	NA	1585307	1576639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1578159_1578334_1578535_1581091_1581270_1582621_1582713_1584539_1584678_1585054
transcript_8955.known	chr1	+	3097	13	FSM	ENSG00000132780.17	ENST00000537798.5	3097	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	822.320750477979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTTTAAAGATCTTA	NA	False	NA	29	True	AATAAA	-25	NA	45583987	45618904	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_8956.known	chr1	+	2080	12	FSM	ENSG00000132780.17	ENST00000453748.5	2080	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	793.021765565837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAATTGAGGAACT	2	True	NA	-35	True	ACTAAA	-41	NA	45584044	45615354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45600384_45600458_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304
transcript_89578.nnic	chr19	-	2649	17	NNC	ENSG00000071564.17	novel	4735	19	NA	NA	-33	-2	intron_retention	TRUE	non_canonical	0	0	junction_16	325.468454452578	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCGTGTAAACCTGAGC	1612	False	NA	-17	True	ATTAAA	-15	NA	1652648	1610966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632369_1652522
transcript_89597.known	chr19	-	2694	5	FSM	ENSG00000071564.17	ENST00000593064.5	2694	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	423.629186317468	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	2937	False	NA	-10	True	AATAAA	-19	NA	1619209	1609292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110
transcript_89598.known	chr19	-	1751	5	FSM	ENSG00000071564.17	ENST00000592628.5	1751	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	510.040684651725	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	3011	False	NA	-10	True	AATAAA	-19	NA	1619135	1609292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1610501_1611703_1611850_1615284_1615521_1615685_1615822_1619110
transcript_89600.nic	chr19	-	3301	14	NIC	ENSG00000130270.16	novel	2759	14	NA	NA	-436	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_10	2.67134697756698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTTTGTTTTTTT	9342	False	NA	-5	True	AATAAA	-16	NA	1812712	1798760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1800156_1800258_1800450_1801955_1802045_1802486_1802646_1805373_1805457_1805887_1805959_1806096_1806170_1806627_1806690_1807167_1807267_1808221_1808336_1809642_1809735_1810621_1810684_1811600_1811885_1812185
transcript_89604.nic	chr19	-	2627	9	ISM	ENSG00000130270.16	ENST00000310127.10	5095	29	21369	2	-90	0	3prime_fragment	FALSE	canonical	3	6	junction_7	10.6997371463041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGGCTCCCTCTTTCC	NA	False	NA	-24	True	AATAAA	-26	NA	1790907	1782076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1789889_1789990_1790756
transcript_89609.nic	chr19	-	2520	8	NIC	ENSG00000130270.16	novel	5095	29	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	7.26748419541537	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGGCTCCCTCTTTCC	NA	False	NA	-24	True	AATAAA	-26	NA	1790900	1782076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1790756
transcript_89614.known	chr19	-	2759	14	FSM	ENSG00000130270.16	ENST00000526092.6	2759	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	3.49640559303493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTTTGTTTTTTT	-13	True	NA	-5	True	AATAAA	-16	NA	1812276	1798760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1800156_1800258_1800450_1801955_1802045_1802486_1802646_1805373_1805457_1805887_1805959_1806096_1806170_1806627_1806690_1807167_1807267_1808221_1808336_1809642_1809735_1810621_1810684_1811488_1811667_1812185
transcript_89616.known	chr19	-	4609	16	FSM	ENSG00000079313.15	ENST00000170168.9	4609	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_14	24.3261176516106	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTGGTCTTGGT	-13	True	NA	-5	True	AATAAA	-18	NA	1848483	1815247	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817330_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933_1820058_1820263_1820396_1821518_1821683_1823571_1823786_1825838_1825944_1826877_1828632_1848201
transcript_89621.nic	chr19	-	1516	2	ISM	ENSG00000079313.15	ENST00000170168.9	4609	16	-250	12400	-250	0	5prime_fragment	FALSE	canonical	3	135	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGCCCCACCTGCCCCC	-13	True	NA	NA	False	AAGAAA	-5	NA	1848733	1827647	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_1828632_1848201
transcript_89629.known	chr19	-	508	2	FSM	ENSG00000129911.9	ENST00000592313.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGACTGGACCTGGG	1045	False	NA	NA	False	NA	NA	NA	1862858	1854317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1854761_1862793
transcript_89630.known	chr19	-	1299	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGGCTCATTTTTCT	11	True	NA	1	True	TATAAA	-33	NA	1876169	1874870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1874900_1876200
transcript_89640.known	chr19	-	1706	5	FSM	ENSG00000129968.17	ENST00000292577.12	1706	5	0	0	0	0	multi-exon	TRUE	canonical	3	540	junction_4	57.6817778852213	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	0	True	NA	NA	False	NA	NA	NA	1885496	1876809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1885351
transcript_89641.known	chr19	-	1679	5	FSM	ENSG00000129968.17	ENST00000677868.1	1679	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	256.04626046869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	0	True	NA	NA	False	NA	NA	NA	1885496	1876809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881261_1881805_1885351
transcript_89659.known	chr19	+	2501	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	30.4617246174058	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	9	True	NA	33	True	AATAAA	-21	NA	1905398	1926013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_89665.known	chr19	+	2394	6	FSM	ENSG00000227500.10	ENST00000409472.5	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	110.97387079849	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	14	True	NA	33	True	AATAAA	-21	NA	1905403	1926013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1923069_1923188_1924107
transcript_89666.known	chr19	+	1477	6	FSM	ENSG00000227500.10	ENST00000414057.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	107.902548626064	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACCCAGCAAACCGG	-12	True	NA	NA	False	NA	NA	NA	1905377	1925016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_89668.known	chr19	+	718	5	FSM	ENSG00000227500.10	ENST00000452128.6	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	30.3315017762062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTAGGGAGGGGTCCGAG	-18	True	NA	NA	False	NA	NA	NA	1905371	1919204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888
transcript_89678.known	chr19	+	1599	2	FSM	ENSG00000213638.6	ENST00000329478.4	1599	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	9	True	NA	8	True	AATAAA	-15	NA	1905398	1913447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1911889
transcript_89679.nnic	chr19	+	1445	2	NNC	ENSG00000213638.6	novel	1599	2	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	0	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	357	False	NA	8	True	AATAAA	-15	NA	1905361	1913447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1905440_1912080
transcript_8968.known	chr1	+	778	7	FSM	ENSG00000132780.17	ENST00000529333.5	778	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	626.97997487072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAAAAAGTTGACTTGA	2	True	NA	72	True	AGTAAA	-15	NA	45584044	45607495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45600384_45600458_45602254_45602366_45604916_45605017_45606481_45606592_45607320
transcript_89682.nnic	chr19	+	2613	12	NNC	ENSG00000133275.16	novel	2895	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.350260449759	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	17	True	NA	NA	False	AATAAA	-18	NA	1941176	1981338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1941243_1969608_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
transcript_89683.known	chr19	+	2895	12	FSM	ENSG00000133275.16	ENST00000255641.13	2895	12	0	0	0	0	multi-exon	TRUE	canonical	3	675	junction_2	49.2238939493534	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	12	True	NA	NA	False	AATAAA	-18	NA	1941171	1981338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1941419_1969507_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
transcript_89684.nnic	chr19	+	2917	12	NNC	ENSG00000133275.16	novel	896	6	NA	NA	-294	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	222.227900294768	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	938	False	NA	NA	False	AATAAA	-18	NA	1942164	1981338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1942434_1969507_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
transcript_89693.nic	chr19	-	2596	11	NIC	ENSG00000133243.10	novel	2629	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	234.015576404649	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCGCACACTGCTTTG	9084	False	NA	-15	True	AATAAA	-18	NA	2034890	1985447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2017182_2017301_2028707_2028835_2034750
transcript_89694.nnic	chr19	-	2497	10	NNC	ENSG00000133243.10	novel	2629	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	170.624994912495	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCGCACACTGCTTTG	10	True	NA	-15	True	AATAAA	-18	NA	2015714	1985447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2015296_2015447_2015578
transcript_89697.nnic	chr19	-	2478	10	NIC	ENSG00000133243.10	novel	2629	9	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	16	junction_9	217.97100271525	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCGCACACTGCTTTG	9084	False	NA	-15	True	AATAAA	-18	NA	2034890	1985447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2028707_2028835_2034750
transcript_8970.nic	chr1	+	589	6	ISM	ENSG00000132780.17	ENST00000350030.8	3225	15	-5	11504	-5	-106	5prime_fragment	FALSE	canonical	3	1092	junction_5	113.23956905605	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGACAAGTCTTTGGCA	-7	True	NA	-34	True	AAAAAG	-16	NA	45584035	45607389	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320
transcript_89701.known	chr19	-	1744	14	FSM	ENSG00000099875.16	ENST00000309340.11	1744	14	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	245.222227435448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	20	False	NA	-12	True	AATAAA	-22	NA	2051224	2037464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
transcript_89706.nic	chr19	-	3662	14	NIC	ENSG00000099875.16	novel	3785	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_13	334.443864086115	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	1	True	NA	-18	True	AATAAA	-16	NA	2051243	2037470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051217
transcript_89710.nic	chr19	-	3501	14	NIC	ENSG00000099875.16	novel	3785	14	NA	NA	1	-159	intron_retention	FALSE	canonical	3	24	junction_13	334.443864086115	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAAAAGTTTTTTTAAAG	1	True	NA	-123	True	TTTAAA	-21	NA	2051243	2037631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051217
transcript_89717.known	chr19	-	875	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	434.505338159255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	9104	False	NA	-12	True	AATAAA	-22	NA	2042140	2037464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
transcript_89718.nic	chr19	-	2906	4	ISM	ENSG00000099875.16	ENST00000250896.9	3785	14	9094	0	-10	0	3prime_fragment	FALSE	canonical	3	966	junction_1	174.816093843406	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	9094	False	NA	-18	True	AATAAA	-16	NA	2042150	2037470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839
transcript_8972.nic	chr1	+	1506	6	ISM	ENSG00000132780.17	ENST00000350030.8	3225	15	-5	10587	-5	334	5prime_fragment	FALSE	canonical	3	1092	junction_5	113.23956905605	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAAGAACAGATGAA	-7	True	NA	3	True	AATGAA	-10	NA	45584035	45608306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320
transcript_89720.nic	chr19	-	2745	4	ISM	ENSG00000099875.16	ENST00000250896.9	3785	14	9094	161	-10	-159	3prime_fragment	FALSE	canonical	3	966	junction_1	174.816093843406	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAAAAGTTTTTTTAAAG	9094	False	NA	-123	True	TTTAAA	-21	NA	2042150	2037631	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839
transcript_89721.known	chr19	-	631	3	FSM	ENSG00000099875.16	ENST00000591588.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	1252	junction_1	66.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGCATGAAGCCCCTTC	8	True	NA	NA	False	GGGGCT	-5	NA	2042082	2039954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2040178_2041039_2041205_2041839
transcript_89723.known	chr19	-	1135	2	FSM	ENSG00000099875.16	ENST00000586620.2	1135	2	0	0	0	0	multi-exon	FALSE	canonical	3	1385	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCACTCCTGGTCTCCGG	12	True	NA	NA	False	NA	NA	NA	2042078	2040308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2041205_2041839
transcript_89726.known	chr19	+	864	7	FSM	ENSG00000099840.14	ENST00000591894.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.6718699236469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGAGGGGGTAAAGGGAG	12	True	NA	NA	False	NA	NA	NA	2096997	2098830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435
transcript_89732.nnic	chr19	-	3051	6	NNC	ENSG00000172081.14	novel	3387	5	NA	NA	-6	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	31.0199935525461	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCGTTTTCCTGCCAG	-31	True	NA	-26	True	AATAAA	-27	NA	2096332	2071031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_2072331_2072676_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
transcript_89738.known	chr19	-	3387	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	11.3880419739304	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTGTCGTTTTCCTG	-25	True	NA	-30	True	AATAAA	-23	NA	2096326	2071035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
transcript_89744.nnic	chr19	-	3432	4	NIC	ENSG00000172081.14	novel	3387	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	33.0252428706689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTGTCGTTTTCCTG	-12	True	NA	-30	True	AATAAA	-23	NA	2096525	2071035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2073425_2076810_2077014_2078139_2078680_2096225
transcript_89749.known	chr19	+	462	2	FSM	ENSG00000099840.14	ENST00000593185.1	462	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGAGTTCTTGTTGGGG	1878	False	NA	16	True	ATTAAA	-21	NA	2098901	2099588	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2099030_2099254
transcript_8975.known	chr1	+	604	5	FSM	ENSG00000132780.17	ENST00000464190.6	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	1285	junction_3	50.0899191454728	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCCTAAGATGCTT	-2	True	NA	NA	False	GGGGCT	-15	NA	45584040	45606680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481
transcript_89750.known	chr19	+	869	8	FSM	ENSG00000099840.14	ENST00000395296.5	869	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.06394436993246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGAAGAGTTCTTGTT	-2	True	NA	12	True	ATTAAA	-17	NA	2096942	2099584	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435_2098451_2099254
transcript_89752.known	chr19	-	5065	32	FSM	ENSG00000065000.19	ENST00000643116.3	5065	32	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_9	68.80847054794	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGGTCTTCTGCCTGGCC	-11	True	NA	-8	True	AATAAA	-22	NA	2151566	2100987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112968_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
transcript_89756.known	chr19	+	7652	28	FSM	ENSG00000104885.19	ENST00000398665.8	7652	28	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_3	17.1128746886588	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGAATGGCAGCCT	-10	True	NA	28	True	AATAAA	-20	NA	2163932	2232578	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2229784
transcript_89772.known	chr19	+	1619	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	72.6428549480264	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	-15	True	NA	24	True	ATTAAA	-13	NA	2236823	2248655	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
transcript_89774.known	chr19	+	885	8	FSM	ENSG00000104897.10	ENST00000592314.5	885	8	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	76.4786217961381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCCACCGCTGCCTGAG	21	True	NA	NA	False	NA	NA	NA	2236859	2247878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2247023_2247593_2247663_2247766
transcript_89783.known	chr19	-	937	6	FSM	ENSG00000104886.12	ENST00000587394.6	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	701.732313635335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATATTTCTCAATAA	-5	True	NA	NA	False	NA	NA	NA	2236272	2230083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2230613_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_89784.nnic	chr19	-	1535	6	NNC	ENSG00000104886.12	novel	1329	6	NA	NA	-40	0	intron_retention	FALSE	canonical	3	392	junction_5	552.077675694281	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	321	False	NA	-7	True	AATAAA	-16	NA	2236705	2233154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235934_2236154
transcript_89785.known	chr19	-	1218	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_5	95.1012092457294	2168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-15	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_89786.known	chr19	-	1329	6	FSM	ENSG00000104886.12	ENST00000589791.5	1329	6	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_5	687.251453254193	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	3	True	NA	-7	True	AATAAA	-16	NA	2236665	2233154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236377
transcript_89790.known	chr19	-	1311	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_4	98.3221745080935	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGTGAAGTGAAGGAG	-12	True	NA	-1	True	AATAAA	-22	NA	2236326	2233148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_89797.known	chr19	-	1092	5	FSM	ENSG00000104886.12	ENST00000591099.6	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	732.086402004572	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	20	True	NA	-5	True	AATAAA	-18	NA	2236294	2233152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2235761_2235829_2235922_2235991_2236154
transcript_89805.known	chr19	-	935	4	FSM	ENSG00000104886.12	ENST00000586608.3	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	752.066929645671	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCACAGGTGCCCTGCC	16	True	NA	NA	False	NA	NA	NA	2236298	2233407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2235761_2235991_2236154
transcript_8982.known	chr1	+	565	6	FSM	ENSG00000132780.17	ENST00000525515.5	565	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	738.100806123391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGATTGGGAACCTAGAG	2	True	NA	-57	True	AAGAAA	-10	NA	45584044	45614117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095
transcript_89825.known	chr19	+	3691	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	50.813635081581	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTTGCTGAGGC	-3	True	NA	NA	False	ATTAAA	-13	NA	2328683	2355095	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
transcript_89829.known	chr19	+	2583	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	65.0480199388051	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	6	True	NA	30	True	AATAAA	-19	NA	2328692	2353933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
transcript_8984.known	chr1	-	3641	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_12	132.909404190306	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	4	True	NA	-17	True	AATAAA	-27	NA	45686533	45627303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
transcript_8988.nic	chr1	-	3452	13	NIC	ENSG00000159592.11	novel	3641	13	NA	NA	18	-190	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	196.02742155117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTGTCTTGTGTAAG	-15	True	NA	-61	True	AATAAA	-14	NA	45687115	45627493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686992
transcript_89897.known	chr19	+	2459	8	FSM	ENSG00000005206.17	ENST00000618220.4	2459	8	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	33.7088373321554	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGGCATTGTGGTGT	9	True	NA	NA	False	AATACA	-7	NA	2328695	2342503	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897
transcript_899.known	chr1	-	1798	15	FSM	ENSG00000127054.22	ENST00000419704.5	1798	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	124.040233762424	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTACTTGGTACTCT	4	True	NA	-21	True	AGTAAA	-9	NA	1324653	1311605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1320995_1321094_1324580
transcript_89916.known	chr19	+	969	6	FSM	ENSG00000104904.12	ENST00000582888.8	969	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	3554.80654888561	3259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	9	False	NA	33	True	AATAAA	-20	NA	2269533	2273331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271390_2271443_2271443_2271531_2271781_2271955_2272734_2272821_2272971
transcript_8992.known	chr1	-	3599	12	FSM	ENSG00000159592.11	ENST00000290795.7	3599	12	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_11	133.001273839671	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	1	True	NA	-17	True	AATAAA	-27	NA	45686536	45627303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686411
transcript_89953.known	chr19	+	1131	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	7210	junction_3	202.455482075004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	0	True	NA	8	True	NA	NA	NA	2269519	2273221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
transcript_89955.known	chr19	+	1012	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	3437.6473867393	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	NA	False	NA	119	True	AATAAA	-15	NA	2269508	2273488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
transcript_89958.known	chr19	-	512	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	1440.53323460446	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	3830	False	NA	-15	True	AATAAA	-15	NA	2328611	2321520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
transcript_89967.known	chr19	+	857	3	FSM	ENSG00000104904.12	ENST00000592787.2	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	7097	junction_2	290	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTCCTGCCTCAGCC	NA	False	NA	NA	False	NA	NA	NA	2269514	2272262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271384_2271531_2271781
transcript_89970.known	chr19	+	1357	3	FSM	ENSG00000104904.12	ENST00000593012.1	1357	3	0	0	0	0	multi-exon	FALSE	canonical	3	7588	junction_2	44.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGGTTTAA	24	False	NA	27	True	AATAAA	-14	NA	2269548	2273325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271384_2271955_2272734
transcript_8998.nic	chr1	-	3403	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	22	-190	combination_of_known_junctions	FALSE	canonical	3	137	junction_11	166.491307196204	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTGTCTTGTGTAAG	-11	True	NA	-61	True	AATAAA	-14	NA	45687111	45627493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_89986.known	chr19	+	2832	1	FSM	ENSG00000104904.12	ENST00000586054.2	2832	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	362	False	NA	119	True	AATAAA	-15	NA	2270656	2273488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2270700_2273500
transcript_89987.known	chr19	-	2241	1	FSM	ENSG00000220008.3	ENST00000585527.1	2241	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCCTGCTATGGT	NA	False	NA	-9	True	NA	NA	NA	2292024	2289783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2289800_2292000
transcript_89988.known	chr19	+	726	4	FSM	ENSG00000104904.12	ENST00000592727.3	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	7097	junction_1	209.956080063321	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGTGATACTGAAG	174	False	NA	-29	True	AATAAA	-42	NA	2271361	2273269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2271531_2271781_2271955_2272734_2272821_2272971
transcript_89989.known	chr19	-	575	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	3817	junction_2	174.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAGCCCCGAATCTT	2	True	NA	-14	True	AATAAA	-16	NA	2328586	2321519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2321823_2324124_2324197_2328386
transcript_89990.known	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1942.2609391005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	3964	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
transcript_89992.known	chr19	-	1664	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	4197	junction_1	86	1758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCTTGATCCGCTGG	-19	True	NA	-1	True	AATAAA	-38	NA	2427586	2425624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2427047_2427255_2427325_2427413
transcript_89993.known	chr19	-	631	3	FSM	ENSG00000099800.8	ENST00000591871.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	2028.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTCTTTATTTCCC	9609	False	NA	-38	True	AATAAA	-16	NA	2427538	2426564	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2427047_2427255_2427325_2427458
transcript_89997.known	chr19	-	4634	12	FSM	ENSG00000176619.13	ENST00000325327.4	4634	12	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_8	78.4568102485703	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-5	True	NA	-6	True	AATAAA	-14	NA	2456959	2428165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
transcript_9.known	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00025_+_0_2000
transcript_90.known	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1392	junction_4	896.223325962899	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
transcript_90001.known	chr19	+	750	4	FSM	ENSG00000099860.9	ENST00000585359.1	750	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.7320284243028	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGAACCCCCTCCCC	19	False	NA	NA	False	AATACA	-4	NA	2476145	2477657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2476403_2476528_2476629_2477028_2477252_2477487
transcript_90002.nic	chr19	+	1400	4	NIC	ENSG00000099860.9	novel	1371	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.1903515328563	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCTTGTATGTTTTCG	0	True	NA	26	True	AATAAA	-14	NA	2476126	2478257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_2476432_2476528_2476631_2477028_2477252_2477487
transcript_90003.known	chr19	+	765	3	FSM	ENSG00000099860.9	ENST00000587345.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCGGGAGAGGGAGGC	21	False	NA	NA	False	NA	NA	NA	2476147	2477436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2476403_2476528_2476631_2477028
transcript_90007.known	chr19	-	4193	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	16.3324829710611	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTGGGCTGTTC	-2	True	NA	-8	True	AATAAA	-20	NA	2702694	2511218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
transcript_90014.nnic	chr19	-	1025	4	NNC	ENSG00000141873.11	novel	1367	3	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.647194932891	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-5	True	NA	-4	True	TTTAAA	-32	NA	2740059	2732523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_2732963_2733346_2733486_2737047_2737380_2739944
transcript_90018.known	chr19	-	524	3	FSM	ENSG00000141873.11	ENST00000589363.5	524	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGGGGGGCGCGCGGGG	-6	True	NA	NA	False	NA	NA	NA	2740017	2733287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2733486_2737047_2737301_2739944
transcript_90019.known	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	11	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-6	True	NA	-4	True	TTTAAA	-32	NA	2740017	2732523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2733486_2737047_2737380_2739944
transcript_90021.known	chr19	-	3378	2	FSM	ENSG00000176490.5	ENST00000323469.5	3378	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCGCCCTGTCTCTGT	-11	True	NA	-2	True	AATAAA	-26	NA	2721372	2714566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2717876_2721303
transcript_90022.known	chr19	-	2940	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTCCACACGGGCA	-17	True	NA	-37	True	AATAAA	-18	NA	2740028	2734523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2737380_2739944
transcript_90023.known	chr19	-	572	2	FSM	ENSG00000141873.11	ENST00000590875.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCCCAAGCCGCCACC	-6	True	NA	NA	False	NA	NA	NA	2740017	2737277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2737777_2739944
transcript_90031.known	chr19	-	2211	12	FSM	ENSG00000104969.11	ENST00000677754.1	2211	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	238.442847943773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	1	True	NA	-24	True	NA	NA	NA	2783327	2754734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757729_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_90036.known	chr19	-	2854	12	FSM	ENSG00000104969.11	ENST00000676943.1	2854	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	223.513306868087	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	128	False	NA	-12	True	AATAAA	-9	NA	2783241	2754722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569
transcript_90038.known	chr19	-	2255	12	FSM	ENSG00000104969.11	ENST00000678595.1	2255	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	239.528496898482	2922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	1	True	NA	-24	True	NA	NA	NA	2783327	2754734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757448_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_9004.nic	chr1	-	2827	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	-18	105	combination_of_known_junctions	FALSE	canonical	3	137	junction_11	166.491307196204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGCAATTGGCTTGTT	1	True	NA	-19	True	NA	NA	NA	45687164	45628122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_90045.known	chr19	-	2589	11	FSM	ENSG00000104969.11	ENST00000677513.1	2589	11	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_10	64.2028815552698	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	0	True	NA	-12	True	AATAAA	-9	NA	2783280	2754722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767687_2768968_2769092_2783232
transcript_90049.known	chr19	-	2227	11	FSM	ENSG00000104969.11	ENST00000677562.1	2227	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	249.175941856352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	1	True	NA	-24	True	NA	NA	NA	2783327	2754734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_90050.known	chr19	-	3744	11	FSM	ENSG00000104969.11	ENST00000677731.1	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_10	78.5025477293572	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTTGTGACCTCTGTCT	1	True	NA	-19	True	AATAAA	-2	NA	2783327	2754729	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_90093.known	chr19	+	4761	13	FSM	ENSG00000172009.15	ENST00000307741.11	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_8	57.0600925925175	1906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGAACCTGTATGTT	-13	True	NA	NA	False	AATAAA	-18	NA	2785502	2815807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
transcript_90095.nic	chr19	+	2539	13	NIC	ENSG00000172009.15	novel	4761	13	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	164.671115830582	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTCCCTGGCCTGGT	10004	False	NA	27	True	ATTAAA	-17	NA	2785480	2813599	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811633_2811735_2813114
transcript_9013.known	chr1	-	382	1	FSM	ENSG00000225447.1	ENST00000432472.1	382	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGCAATACATATTTACA	5649	False	NA	NA	False	AAAACA	-35	NA	45646197	45645815	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45645800_45646200
transcript_9015.known	chr1	-	1947	10	FSM	ENSG00000197429.11	ENST00000359942.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.3628275961788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTCAGGGATTTTCA	-6	True	NA	NA	False	CATAAA	-38	NA	45750650	45694323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45694516_45700069_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_9016.known	chr1	-	3117	9	FSM	ENSG00000197429.11	ENST00000396478.4	3117	9	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	10.1242283656583	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTCCTTTTTTGCTA	-9	True	NA	NA	False	AAAAAG	-7	NA	45750653	45698710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_90164.known	chr19	+	3704	5	FSM	ENSG00000172006.12	ENST00000317243.10	3704	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	5.19615242270663	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATAGACTGTGGGTAC	-7	True	NA	NA	False	NA	NA	NA	2819867	2836735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2820125_2823039_2823113_2827616_2827744_2832302_2832495_2833680
transcript_90169.known	chr19	+	8504	4	FSM	ENSG00000186300.12	ENST00000334241.9	8504	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAAAAAGCTTCAC	-2	True	NA	NA	False	ATTAAA	-16	NA	2841474	2860471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852379
transcript_90172.known	chr19	+	1970	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.01387685344754	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	-24	True	NA	NA	False	AATAAA	-17	NA	2900927	2918473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
transcript_90174.known	chr19	-	2040	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTATATTTTGTAATT	-25	True	NA	-3	True	AATAAA	-23	NA	2944971	2933217	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
transcript_90175.known	chr19	+	1977	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.36895638531848	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	-3	True	NA	8	True	AATAAA	-17	NA	2977563	2995179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_90176.nic	chr19	+	2017	17	NIC	ENSG00000104953.20	novel	1977	17	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_1	9.82960292941683	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	NA	False	NA	8	True	AATAAA	-17	NA	2977532	2995179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_2977620_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_90189.known	chr19	+	456	3	FSM	ENSG00000104953.20	ENST00000482627.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	NA	False	NA	27	True	ATTAAA	-44	NA	2977549	2980407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2977611_2978197_2978285_2980099
transcript_90191.known	chr19	+	1883	16	FSM	ENSG00000104953.20	ENST00000452088.5	1883	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.8591736642989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	13	False	NA	8	True	AATAAA	-17	NA	2977579	2995179	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2977620_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_90196.nic	chr19	-	2510	18	ISM	ENSG00000065717.15	ENST00000262953.11	2812	20	702	0	-222	0	3prime_fragment	FALSE	canonical	3	39	junction_14	44.5724789792192	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	7045	False	NA	-25	True	AATAAA	-15	NA	3028578	2997643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318
transcript_90206.nic	chr19	-	2333	17	NIC	ENSG00000065717.15	novel	2812	20	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_16	54.4572294902155	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	9944	False	NA	-25	True	AATAAA	-15	NA	3025679	2997643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019467_3019698_3019774_3025019_3025083_3025554
transcript_9021.known	chr1	+	1465	3	FSM	ENSG00000159596.7	ENST00000372025.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	-6	True	NA	11	True	ATTAAA	-15	NA	45688180	45694436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45688276_45690973_45691111_45693203
transcript_9024.nnic	chr1	+	1443	3	NNC	ENSG00000159596.7	novel	1465	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	-6	True	NA	11	True	ATTAAA	-15	NA	45688180	45694436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_45688254_45690973_45691111_45693203
transcript_9025.known	chr1	+	722	2	FSM	ENSG00000159596.7	ENST00000496366.1	722	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAGTAGTTAAAAGTAG	9	True	NA	NA	False	NA	NA	NA	45688195	45693845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45688276_45693203
transcript_90253.nnic	chr19	-	1749	7	NNC	ENSG00000104964.15	novel	1798	7	NA	NA	274	0	intron_retention	FALSE	non_canonical	0	0	junction_6	1013.02376027855	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-25	True	NA	-10	True	AATAAA	-16	NA	3061916	3052909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3061643
transcript_90254.known	chr19	-	1798	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	0	0	0	multi-exon	FALSE	canonical	3	2362	junction_2	226.945478033822	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	26	True	NA	-10	True	AATAAA	-16	NA	3062495	3052909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
transcript_90256.known	chr19	-	1884	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	990.7935652238	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-1	True	NA	-10	True	AATAAA	-16	NA	3063107	3052909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
transcript_90259.nnic	chr19	-	1500	7	NNC	ENSG00000104964.15	novel	1798	7	NA	NA	274	53	intron_retention	FALSE	non_canonical	0	0	junction_6	1013.02376027855	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTTTTTATTTT	-25	True	NA	-29	True	AATAAA	-16	NA	3061916	3053158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3061643
transcript_90265.known	chr19	-	1666	6	FSM	ENSG00000104964.15	ENST00000586742.5	1666	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	1081.07520552457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAGAAGTGGAAAATGC	5341	False	NA	-83	True	NA	NA	NA	3062883	3052982	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
transcript_90272.known	chr19	+	4190	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	8.13941029804985	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	-12	True	NA	14	True	AATAAA	-14	NA	3094361	3123999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
transcript_90274.nic	chr19	+	1961	4	ISM	ENSG00000060558.4	ENST00000262958.4	2273	7	15083	0	1276	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGCCAGCGTCCTGTTTA	1279	False	NA	5	True	ATTAAA	-17	NA	3151115	3163749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_3151836_3155822_3155953_3157727_3157882_3162792
transcript_90275.known	chr19	+	1564	1	FSM	ENSG00000125910.6	ENST00000246115.5	1564	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGTTGCGGCCTCTTA	0	True	NA	12	True	NA	NA	NA	3178768	3180332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3178800_3180300
transcript_90281.known	chr19	+	3680	15	FSM	ENSG00000125912.11	ENST00000246117.9	3680	15	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_11	88.3583843312713	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	-9	True	NA	35	True	AATAAA	-21	NA	3185929	3209575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206261_3206426_3207197_3207252_3207390_3207470_3207628
transcript_90284.nic	chr19	+	2497	15	NIC	ENSG00000125912.11	novel	3680	15	NA	NA	3	175	combination_of_known_junctions	TRUE	canonical	3	337	junction_11	91.3730020859777	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGCCCGATCGCGCGC	6701	False	NA	22	True	ATTAAA	-16	NA	3185565	3208031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
transcript_90285.nic	chr19	+	4041	15	NIC	ENSG00000125912.11	novel	3680	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	337	junction_11	91.3730020859777	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	6701	False	NA	35	True	AATAAA	-21	NA	3185565	3209575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
transcript_90293.known	chr19	+	2735	9	FSM	ENSG00000125912.11	ENST00000592737.5	2735	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_5	115.363488049729	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	2353	False	NA	35	True	AATAAA	-21	NA	3203796	3209575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
transcript_90295.known	chr19	+	1591	13	FSM	ENSG00000161082.13	ENST00000334293.10	1591	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.49519052838329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	196	False	NA	NA	False	NA	NA	NA	3225484	3297016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3225619_3250984_3251068_3273871_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125_3282268_3282351_3282499_3284901_3284965_3285941_3286026_3290271_3290375_3293318_3293487_3296757
transcript_9030.nic	chr1	+	5755	30	NNC	ENSG00000086015.23	novel	5737	29	NA	NA	-82	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	43.517678559474	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTATGTCTTTTGCTTGC	NA	False	NA	26	True	AATATA	-16	NA	45803529	46036122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771_46023981_46025676_46025816_46027730_46027864_46028767_46028934_46029465_46029568_46029830_46029954_46030128_46030239_46030606_46030762_46031006_46031291_46031390_46031586_46032177_46032262_46032325_46032405_46032595_46032719_46033801_46033939_46034072_46034267_46034537
transcript_90300.known	chr19	+	1896	13	FSM	ENSG00000161082.13	ENST00000292672.7	1896	13	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_10	3.83242742918897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	-12	True	NA	NA	False	AATAAA	-17	NA	3224660	3297076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3224999_3250984_3251068_3273871_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125_3282268_3282351_3282499_3284901_3284965_3285941_3286026_3290230_3290375_3293318_3293487_3296757
transcript_90305.known	chr19	-	1312	4	FSM	ENSG00000095932.7	ENST00000215531.6	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	2.35702260395516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCGCTCTGTCA	-2	True	NA	NA	False	NA	NA	NA	3480525	3473985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3474997_3478418_3478479_3478817_3478930_3480396
transcript_90306.known	chr19	-	820	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	4508	False	NA	-120	True	NA	NA	NA	3479088	3474507	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3474997_3478418_3478479_3478817
transcript_90311.known	chr19	-	1757	5	FSM	ENSG00000129932.10	ENST00000672935.1	1757	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	130.511254303987	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTCCTCTGAGTGTGTT	12	True	NA	-5	True	ATTAAA	-17	NA	3500637	3490820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500532
transcript_90312.known	chr19	-	1763	5	FSM	ENSG00000129932.10	ENST00000427575.6	1763	5	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_4	26.4232378788066	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTCCTCTGAGTGT	7	True	NA	-8	True	ATTAAA	-14	NA	3500674	3490823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500560
transcript_90317.nic	chr19	-	2505	4	NIC	ENSG00000129932.10	novel	1763	5	NA	NA	-292	0	intron_retention	FALSE	canonical	3	251	junction_3	25.6645020732269	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTCCTCTGAGTGT	NA	False	NA	-8	True	ATTAAA	-14	NA	3500966	3490823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3492500_3494027_3494105_3496540_3496887_3500560
transcript_90331.known	chr19	+	5178	14	FSM	ENSG00000105325.15	ENST00000441788.7	5178	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_10	21.1824980786514	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGTTCAGTACCTTCA	2	True	NA	19	True	AATACA	-22	NA	3506310	3538334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3534420_3534514_3534794
transcript_9038.known	chr1	+	5737	29	FSM	ENSG00000086015.23	ENST00000361297.7	5737	29	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	22.3070811032492	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTATGTCTTTTGCTTGC	13	True	NA	26	True	AATATA	-16	NA	45803611	46036122	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771_46023981_46025676_46025816_46027730_46027864_46028767_46028934_46029465_46029568_46029830_46029954_46030128_46030239_46030606_46030762_46031006_46031291_46031390_46031586_46032177_46032405_46032595_46032719_46033801_46033939_46034072_46034267_46034537
transcript_90392.known	chr19	+	1585	10	FSM	ENSG00000064961.19	ENST00000333651.11	1585	10	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	100.443215331713	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	-28	True	NA	22	True	AATAAA	-24	NA	3572943	3579083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3572995_3573291_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_90398.nic	chr19	-	2138	10	NIC	ENSG00000161091.14	novel	777	7	NA	NA	-39	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_1	43.8425916148461	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAAACCTCCTGCCC	471	False	NA	NA	False	AATAAA	-35	NA	3557625	3538260	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3538757_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
transcript_90407.known	chr19	-	2137	10	FSM	ENSG00000161091.14	ENST00000355415.7	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	31.4128227336985	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTCCTGTCTGCCTG	-4	True	NA	-3	True	AATAAA	-13	NA	3557586	3544198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3544733_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
transcript_90423.nic	chr19	+	2201	9	NIC	ENSG00000064961.19	novel	1585	10	NA	NA	-34	0	intron_retention	FALSE	canonical	3	577	junction_1	105.666633806514	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	131	False	NA	22	True	AATAAA	-24	NA	3572909	3579083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_3572995_3573291_3573348_3573691_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_90426.nic	chr19	+	1882	9	NIC	ENSG00000064961.19	novel	1585	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	804	junction_2	40.0825320432729	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	-28	True	NA	22	True	AATAAA	-24	NA	3572943	3579083	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_90442.known	chr19	+	2434	8	FSM	ENSG00000064961.19	ENST00000488973.6	2434	8	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_6	32.4961536185438	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTAAGCTTGTTTG	7	True	NA	27	True	AATAAA	-29	NA	3572978	3579088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3573348_3573691_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_90458.known	chr19	+	806	3	FSM	ENSG00000064961.19	ENST00000470356.3	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	134.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGGCCCCGCCCCCATC	44	False	NA	NA	False	NA	NA	NA	3572822	3574269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3572995_3573291_3573348_3573691
transcript_90461.known	chr19	-	1769	1	FSM	ENSG00000161091.14	ENST00000585788.1	1769	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCCAACAAACATCCA	7962	False	NA	NA	False	AATAAA	-21	NA	3540043	3538274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3538300_3540000
transcript_90463.known	chr19	-	2642	3	FSM	ENSG00000006638.13	ENST00000375190.10	2642	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCGCGATTGTTCATGC	-1	True	NA	NA	False	ATTAAA	-17	NA	3606875	3594506	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3595934_3599848_3600718_3606529
transcript_90466.nic	chr19	-	2694	11	NIC	ENSG00000105298.14	novel	2810	12	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.1587793476763	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	3669	False	NA	-14	True	AATAAA	-19	NA	3626834	3610644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3610967_3611899_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_90471.nnic	chr19	-	2185	10	NIC	ENSG00000105298.14	novel	2671	11	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.9953324654236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	3669	False	NA	-14	True	AATAAA	-19	NA	3626834	3610644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3610972_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_90475.known	chr19	-	3583	10	FSM	ENSG00000105298.14	ENST00000429344.7	3583	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_7	12.1177351915628	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	-4	True	NA	-14	True	AATAAA	-19	NA	3626790	3610644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_90479.nic	chr19	-	4061	9	NIC	ENSG00000105298.14	novel	3583	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	115	junction_3	6.9810010027216	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	3669	False	NA	-14	True	AATAAA	-19	NA	3626834	3610644	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620803_3623687_3624163_3626595
transcript_90485.known	chr19	-	2671	11	FSM	ENSG00000105298.14	ENST00000248420.9	2671	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.1587793476763	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCTTAGGTTTGCAGA	-29	True	NA	-19	True	AATAAA	-14	NA	3626815	3610649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3610972_3611903_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_90488.known	chr19	-	5069	19	FSM	ENSG00000186111.11	ENST00000679885.1	5069	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.3208808420831	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCTGTTTGCCTTTCTG	85	False	NA	32	True	AATAAA	-15	NA	3700390	3630182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3633170_3633436_3633521_3637535_3637614_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
transcript_90489.known	chr19	-	5069	18	FSM	ENSG00000186111.11	ENST00000335312.8	5069	18	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	38.3271295315927	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCTGTTTGCCTTTCTG	7	True	NA	32	True	AATAAA	-15	NA	3700468	3630182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3633170_3633436_3633521_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
transcript_90492.known	chr19	-	2289	17	FSM	ENSG00000186111.11	ENST00000539785.5	2289	17	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	29.7620117557601	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAGAACAAAAAAGAC	10	True	NA	NA	False	NA	NA	NA	3700465	3632875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3633170_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
transcript_90499.nic	chr19	-	2021	8	ISM	ENSG00000186111.11	ENST00000587482.1	1311	9	-73	1165	-46	-1165	5prime_fragment	FALSE	canonical	3	163	junction_4	19.4411723842331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGCGCGGTGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	3700514	3651055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
transcript_90504.known	chr19	+	3076	21	FSM	ENSG00000105289.15	ENST00000541714.7	3076	21	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	40.9445967131196	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTCTAGTGGCTTCCA	-3	True	NA	9	True	AATAAA	-19	NA	3708383	3750813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3708562_3728423_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
transcript_90509.known	chr19	+	3068	21	FSM	ENSG00000105289.15	ENST00000589378.5	3068	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.9171504279573	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGGCTTCTAGTGGCT	3	True	NA	5	True	AATAAA	-15	NA	3721736	3750809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3721911_3728423_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
transcript_9054.nic	chr1	+	3505	15	ISM	ENSG00000086015.23	ENST00000361297.7	5737	29	-82	10783	-82	975	5prime_fragment	FALSE	canonical	3	149	junction_3	23.3198697794523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCATCAGATCTCATGAG	NA	False	NA	NA	False	AATAAA	-11	NA	45803529	46025339	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771
transcript_90545.known	chr19	-	2176	11	FSM	ENSG00000011132.12	ENST00000316757.4	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	27.3278246481494	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGTTGTGGGTTCTGT	-2	True	NA	91	True	ATTAAA	-16	NA	3761692	3750771	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3759601_3759688_3760302_3761535
transcript_90552.nnic	chr19	-	2037	10	NIC	ENSG00000011132.12	novel	2176	11	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	45.5674781146422	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTCGGATCAGGGTCT	-10	True	NA	-16	True	AGTAAA	-17	NA	3761700	3750878	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759688_3760302_3761535
transcript_90582.known	chr19	+	721	4	FSM	ENSG00000105289.15	ENST00000587912.1	721	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.9756521002609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCTGAGCAGAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	3721616	3730287	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3721911_3728423_3728481_3728603_3728714_3730027
transcript_90591.known	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	5.5	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	12	True	NA	28	True	AATAAA	-22	NA	3762681	3767565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3762819_3765165_3765332_3767260
transcript_90592.known	chr19	-	2145	3	FSM	ENSG00000173976.16	ENST00000555978.5	2145	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCAGACAGTGATAAGT	59	False	NA	NA	False	AATAAA	-20	NA	3772211	3769088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3770960_3771526_3771752_3772162
transcript_90602.known	chr19	-	1994	14	FSM	ENSG00000007264.15	ENST00000585778.5	1994	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	50.9262141724753	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTAGGCGCCTGTGTGTC	7	True	NA	-8	True	GATAAA	-15	NA	3786282	3777974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3778423_3778508_3778593_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
transcript_90607.known	chr19	-	1907	13	FSM	ENSG00000007264.15	ENST00000395040.6	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	42.4233786438039	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCGCCTGTGTGTCTC	-24	True	NA	-6	True	GATAAA	-17	NA	3786413	3777972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3786168
transcript_9062.nic	chr1	+	2012	5	ISM	ENSG00000086015.23	ENST00000361297.7	5737	29	-82	75591	-82	43022	5prime_fragment	FALSE	canonical	3	149	junction_3	32.3187252223846	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAGGCTTCCATTGATTC	NA	False	NA	NA	False	AAAAAG	-22	NA	45803529	45960531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385
transcript_90627.known	chr19	-	2073	14	FSM	ENSG00000007264.15	ENST00000395045.6	2073	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	67.0368617135555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTAGGCGCCTGTGTGTC	NA	False	NA	-8	True	GATAAA	-15	NA	3801812	3777974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3789272_3789405_3801531
transcript_90629.known	chr19	-	1019	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	37.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	13	True	NA	-1	True	AATAAA	-25	NA	3869015	3851804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3852615_3855401_3855560_3868964
transcript_90631.nic	chr19	-	1200	3	NIC	ENSG00000105278.12	novel	1019	3	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_2	27	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	NA	False	NA	-1	True	AATAAA	-25	NA	3869059	3851804	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3852615_3855401_3855697_3868964
transcript_90633.known	chr19	-	870	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAAATGTGAATTTCAT	-4	True	NA	-9	True	AATAAA	-17	NA	3869032	3851812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3852615_3868964
transcript_90635.known	chr19	+	1957	14	FSM	ENSG00000167654.18	ENST00000597739.1	1957	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.5481502325615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGACACCCACCGCCAC	14	True	NA	NA	False	NA	NA	NA	3880684	3924997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3881009_3885726_3885845_3895126_3895198_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
transcript_90639.known	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	8.50939023797958	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	14	True	NA	18	True	AATAAA	-18	NA	3880684	3928082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
transcript_90650.nnic	chr19	+	1219	8	NNC	ENSG00000077009.14	novel	1160	8	NA	NA	-92	0	intron_retention	FALSE	canonical	3	28	junction_1	334.994669467185	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGTGTCTACCGTGTT	8082	False	NA	12	True	AGTAAA	-20	NA	3932976	3942416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_3933179_3933490_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_90651.known	chr19	+	1139	8	FSM	ENSG00000077009.14	ENST00000616156.4	1139	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	393.570417421569	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	6	True	NA	10	True	AGTAAA	-18	NA	3933102	3942414	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937224_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_9067.known	chr1	-	5174	11	FSM	ENSG00000117461.15	ENST00000420542.5	5174	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	30.6568100101756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGTCTTCATGCTA	295	False	NA	NA	False	AATAAA	-17	NA	46133036	46040141	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846_46131957_46132783
transcript_90676.known	chr19	-	2286	9	FSM	ENSG00000167657.14	ENST00000545797.7	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	69.3789413294841	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGTGTTGTGTGCCTCA	-8	True	NA	-2	True	AATAAA	-18	NA	3971099	3958452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3970920
transcript_90677.nic	chr19	-	2227	9	NIC	ENSG00000167657.14	novel	2286	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_6	12.8816730279883	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACGCGGGTGTTGTGTG	9827	False	NA	-7	True	AATAAA	-13	NA	3971146	3958457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3971021
transcript_9069.known	chr1	-	5596	10	FSM	ENSG00000117461.15	ENST00000262741.10	5596	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	15.6914697279198	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTTCATGCTATG	19	True	NA	NA	False	AATAAA	-19	NA	46132629	46040139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846
transcript_90696.known	chr19	-	2105	8	FSM	ENSG00000167657.14	ENST00000301264.7	2105	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_6	12.9267954581299	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCGGGTGTTGTGTGCCTC	9571	False	NA	-3	True	AATAAA	-17	NA	3969828	3958453	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673
transcript_90697.known	chr19	-	2058	3	FSM	ENSG00000167657.14	ENST00000595279.1	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACGCGGGTGTTGTGTG	9251	False	NA	-7	True	AATAAA	-13	NA	3961840	3958457	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3959638_3960058_3960105_3961008
transcript_90728.known	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6813	junction_14	678.896001322916	8506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-1	True	NA	-14	True	AATAAA	-17	NA	3985463	3976055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
transcript_90822.known	chr19	+	3069	11	FSM	ENSG00000105229.7	ENST00000262971.3	3069	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	10.5304320899002	4195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCGTCCGCTTTTCTG	-3	True	NA	30	True	AATAAA	-20	NA	4007735	4039386	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4007788_4012922_4013350_4024035_4024121_4028145_4028188_4028509_4028601_4028719_4028849_4028930_4029037_4033099_4033174_4033419_4033581_4037373_4037505_4037615
transcript_9084.known	chr1	+	1849	2	FSM	ENSG00000171357.6	ENST00000371980.4	1849	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGGGATCTCACTTCC	-18	True	NA	10	True	AATAGA	-15	NA	46203333	46221256	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46203625_46219698
transcript_90846.known	chr19	-	2083	3	FSM	ENSG00000178951.9	ENST00000601588.1	2083	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	7	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAACAGAAACCCGAGA	1457	False	NA	NA	False	NA	NA	NA	4065732	4047741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4048245_4053970_4055248_4065429
transcript_90848.nnic	chr19	-	1661	12	NNC	ENSG00000126934.15	novel	1727	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	339.88670937036	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	-16	True	NA	-8	True	AAAAAG	-5	NA	4124122	4090320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4099200_4099415_4101018_4101144_4101228_4101281_4102375_4102454_4110508_4110656_4117418_4117630_4123783_4123976_4124041
transcript_90849.known	chr19	-	1727	11	FSM	ENSG00000126934.15	ENST00000262948.10	1727	11	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_9	95.4792647646598	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	-16	True	NA	-8	True	AAAAAG	-5	NA	4124122	4090320	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4099200_4099415_4101018_4101144_4101228_4101281_4102375_4102454_4110508_4110656_4117418_4117630_4123783
transcript_90850.known	chr19	+	2588	10	FSM	ENSG00000060566.14	ENST00000078445.7	2588	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.06574033851394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTTGGTGTGGAGGC	-5	True	NA	NA	False	AATAAA	-15	NA	4153630	4173054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4153775_4154898_4155028_4156994_4157296_4159663_4159783_4164502_4164641_4168350_4168458_4170139_4170209_4171090_4171176_4171382_4171480_4171655
transcript_90852.nic	chr19	-	1604	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	22.4862769942297	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	4182607	4174108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_90860.known	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.4310342387469	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-5	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_90866.known	chr19	-	1361	7	FSM	ENSG00000077463.15	ENST00000601488.5	1361	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	29.9091216112335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	11	True	NA	-4	True	AATAAA	-19	NA	4182547	4174108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_90868.known	chr19	-	1473	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	24.6537128148187	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGTGTGTTTACTTTA	-7	True	NA	-5	True	AATAAA	-18	NA	4182565	4174109	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_90869.known	chr19	-	827	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	24.6080384337223	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTCCCCAGCTGAC	58	False	NA	NA	False	NA	NA	NA	4182500	4174635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_90870.known	chr19	-	1057	7	FSM	ENSG00000077463.15	ENST00000595670.5	1057	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	13.2748718344933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGCCAGCCCCAAACGGGA	24	False	NA	NA	False	NA	NA	NA	4182534	4174703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_90871.known	chr19	-	1506	7	FSM	ENSG00000077463.15	ENST00000305232.10	1506	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	28.1508831517276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	8	True	NA	-4	True	AATAAA	-19	NA	4182550	4174108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_90874.nic	chr19	-	2172	7	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-41	0	intron_retention	FALSE	canonical	3	57	junction_1	9.47657931721967	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	4182607	4174108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4174947_4175027_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_90880.nic	chr19	-	2253	6	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-41	0	intron_retention	FALSE	canonical	3	57	junction_1	9.57914401186244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	4182607	4174108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4174947_4175027_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_90881.known	chr19	-	717	6	FSM	ENSG00000077463.15	ENST00000596298.5	717	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	8.1338797630651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTTCCTGGAGCAGGT	24	False	NA	NA	False	NA	NA	NA	4182534	4175571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_90883.known	chr19	-	1260	5	FSM	ENSG00000077463.15	ENST00000601069.5	1260	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	29.4310635213884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGATCCCCGCCTG	-8	True	NA	NA	False	NA	NA	NA	4182566	4174877	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175938_4177078_4177139_4180781_4180910_4182473
transcript_90889.known	chr19	-	371	2	FSM	ENSG00000077463.15	ENST00000594341.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAATTCCAGACCAGC	12	True	NA	NA	False	NA	NA	NA	4182546	4180611	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4180910_4182473
transcript_9089.known	chr1	-	2719	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	49.1348738439858	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-6	True	NA	-16	True	ATTAAA	-20	NA	46198434	46188682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_90896.known	chr19	+	3711	20	FSM	ENSG00000089847.13	ENST00000262970.9	3711	20	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	22.924300331883	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCAGGCCCAGTGGC	53	False	NA	NA	False	NA	NA	NA	4198139	4224505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4198533_4199874_4200006_4200082_4200172_4202025_4202091_4202868_4202927_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
transcript_90903.known	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	24.9423825842599	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	-18	True	NA	23	True	AATAAA	-15	NA	4247079	4269088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
transcript_90909.known	chr19	+	1910	6	FSM	ENSG00000105251.11	ENST00000543264.7	1910	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.1773780845922	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	0	True	NA	17	True	AATAAA	-13	NA	4279265	4290722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4280361_4282869_4282976_4283053_4283243_4284780_4284905_4288242_4288363_4290446
transcript_90912.known	chr19	-	1262	5	FSM	ENSG00000167664.8	ENST00000301272.6	1262	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.38484800354236	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	4302431	4292231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4292886_4294566_4294681_4294774_4294817_4297985_4298346_4302339
transcript_90920.known	chr19	+	1634	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	122.976595560113	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	16	True	NA	-15	True	NA	NA	NA	4304675	4323806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
transcript_90923.known	chr19	+	1833	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_8	30.1602203057088	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	-12	True	NA	15	True	AATAAA	-15	NA	4304597	4323836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_9093.known	chr1	+	2549	19	FSM	ENSG00000085999.13	ENST00000442598.5	2549	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.3760902808748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	7	False	NA	12	True	AATAAA	-15	NA	46247694	46278473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46247747_46248343_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_90948.nic	chr19	+	3110	12	NIC	ENSG00000105255.11	novel	1833	13	NA	NA	-32	0	intron_retention	FALSE	canonical	3	422	junction_7	28.710006318528	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	NA	False	NA	15	True	AATAAA	-15	NA	4304565	4323836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_90978.known	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.4550901292398	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-10	True	NA	-3	True	ATTAAA	-16	NA	4338821	4324042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_90979.known	chr19	-	1376	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.1767938802135	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-16	True	NA	-3	True	ATTAAA	-16	NA	4338827	4324042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_90981.known	chr19	+	1614	13	FSM	ENSG00000008382.16	ENST00000599840.6	1614	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	28.6078611962206	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCACGCTGGTCTCCC	-2	True	NA	6	True	AATAAA	-16	NA	4343561	4360078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_90985.known	chr19	+	1567	12	FSM	ENSG00000008382.16	ENST00000262966.12	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	44.1069324211433	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGTCTCCCCAAGGCTG	436	False	NA	14	True	AATAAA	-24	NA	4343526	4360086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4359162_4359256_4359915
transcript_90986.known	chr19	+	1475	11	FSM	ENSG00000008382.16	ENST00000359935.8	1475	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	46.1415214313529	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACGCTGGTCTCCCCAA	-10	True	NA	9	True	AATAAA	-19	NA	4343553	4360081	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_90989.known	chr19	+	1445	12	FSM	ENSG00000008382.16	ENST00000597036.5	1445	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	42.1151510790739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	11	False	NA	-34	True	NA	NA	NA	4343710	4360038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357339_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_9099.known	chr1	+	3078	18	FSM	ENSG00000085999.13	ENST00000371975.9	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_6	40.6263248386584	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	6	True	NA	12	True	AATAAA	-15	NA	46247762	46278473	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_91002.known	chr19	-	2194	10	FSM	ENSG00000141985.9	ENST00000598564.5	2194	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	244.649459481707	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCTTGCCTCGTCTTGG	86	False	NA	-9	True	ATTAAA	-14	NA	4400418	4360370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364121_4365572_4365626_4366500_4366574_4366925_4366995_4400323
transcript_91003.known	chr19	-	2516	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_6	56.2869631639709	2430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	-43	True	NA	-8	True	ATTAAA	-15	NA	4400547	4360369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
transcript_91017.known	chr19	-	1404	9	FSM	ENSG00000141985.9	ENST00000417295.6	1404	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	268.616827469911	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGCCGAGGCGGGG	-21	True	NA	NA	False	NA	NA	NA	4400525	4361315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4366500_4366574_4366925_4366995_4400323
transcript_91034.nnic	chr19	-	2162	7	NIC	ENSG00000141985.9	novel	2516	10	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	304.265600348701	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	NA	False	NA	-8	True	ATTAAA	-15	NA	4400580	4360369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364121_4400323
transcript_91056.known	chr19	+	3366	15	FSM	ENSG00000167670.16	ENST00000301280.10	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_3	70.356417690244	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	1	True	NA	24	True	TATAAA	-19	NA	4402639	4443397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
transcript_91061.nic	chr19	+	3968	14	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-21	2	-21	-2	intron_retention	FALSE	canonical	3	539	junction_3	72.5729993639948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTCTGTCTGTCTTT	-20	True	NA	22	True	TATAAA	-17	NA	4402618	4443395	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244
transcript_91063.nic	chr19	+	3330	14	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	176.836534017475	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	-20	True	NA	24	True	TATAAA	-19	NA	4402618	4443397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4402815_4405911_4405963_4408902_4409760_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
transcript_91073.known	chr19	-	1915	11	FSM	ENSG00000167671.12	ENST00000301281.11	1915	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	7.9724525711979	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGGTTCTCCGTTGA	-4	True	NA	NA	False	AATAAA	-18	NA	4457794	4445005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4445624_4446048_4446198_4446282_4446414_4446499_4446720_4446835_4446921_4447549_4447626_4448317_4448416_4452363_4452493_4453457_4453523_4453929_4454094_4457614
transcript_91079.nic	chr19	+	1342	5	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-159	20789	-159	-6255	5prime_fragment	FALSE	canonical	3	539	junction_3	83.6092100189925	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAAGGAGAAGCTG	NA	False	NA	8	True	NA	NA	NA	4402480	4422608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565
transcript_91080.nic	chr19	+	1268	5	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-30	20734	-30	-6200	5prime_fragment	FALSE	canonical	3	539	junction_3	83.6092100189925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGGAGGAAGAGA	NA	False	NA	63	True	NA	NA	NA	4402609	4422663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565
transcript_91081.nic	chr19	+	1391	5	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-21	20602	-21	-6068	5prime_fragment	FALSE	canonical	3	539	junction_3	83.6092100189925	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCTTGGAGGCCA	-20	True	NA	14	True	NA	NA	NA	4402618	4422795	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565
transcript_91082.nic	chr19	+	1161	4	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-21	25321	-21	8773	5prime_fragment	FALSE	canonical	3	539	junction_3	82.5873275186131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACATTTTCCCTGAAA	-20	True	NA	NA	False	NA	NA	NA	4402618	4418076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019
transcript_91085.nic	chr19	+	1168	4	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	-36	-6255	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	231.530175619124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAAGGAGAAGCTG	NA	False	NA	8	True	NA	NA	NA	4402603	4422608	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4402815_4408902_4409760_4418019_4418077_4422565
transcript_91097.known	chr19	+	2255	16	FSM	ENSG00000167674.15	ENST00000621835.4	2255	16	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_15	89.161027859087	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	35	True	NA	3	True	TATAAA	-20	NA	4472305	4502207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501913
transcript_91104.nic	chr19	+	2347	16	NIC	ENSG00000167674.15	novel	3100	15	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	127.569170779359	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	2554	False	NA	3	True	TATAAA	-20	NA	4474824	4502207	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4475031_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
transcript_91108.nic	chr19	+	2939	15	ISM	ENSG00000167674.15	ENST00000616600.5	2267	16	-78	-1	-78	0	intron_retention	FALSE	canonical	3	398	junction_6	52.3824242217458	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTTTTATTGGCTTG	-2	True	NA	4	True	TATAAA	-21	NA	4472218	4502208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190
transcript_91150.known	chr19	-	2470	8	FSM	ENSG00000214456.8	ENST00000381848.7	2470	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	2.1946130708196	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCACGTGTGTGTTCCAG	-1	True	NA	-4	True	AATAAA	-21	NA	4535224	4522530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4524086_4524962_4525077_4525632_4525833_4529072_4529254_4529783_4529867_4531626_4531823_4534014_4534096_4535164
transcript_91155.known	chr19	-	887	4	FSM	ENSG00000214456.8	ENST00000590350.3	887	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGGGGGGCCCTTCCTT	8187	False	NA	NA	False	NA	NA	NA	4535185	4529277	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4529867_4531626_4531823_4534014_4534096_4535164
transcript_91156.known	chr19	-	2605	2	FSM	ENSG00000171236.10	ENST00000306390.7	2605	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTACATCTGTGGTC	1	True	NA	NA	False	AATAAA	-17	NA	4540036	4536401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4538952_4539981
transcript_91159.known	chr19	-	4021	17	FSM	ENSG00000167680.17	ENST00000676793.1	4021	17	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_7	116.960580298449	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCCCCATGACTCTGGC	-1	True	NA	-12	True	AATAAA	-17	NA	4581776	4542592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4544530_4546215_4546275_4546391_4546470_4548026_4548174_4548262_4548446_4550122_4550273_4550798_4550931_4552421_4552640_4554387_4554477_4554975_4555096_4555473_4555565_4555987_4556090_4556950_4557014_4557162_4557224_4558025_4558150_4558336_4558490_4581462
transcript_91162.nnic	chr19	+	760	3	Antisense	novelGene_ENSG00000167680.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCCCTCTTTACCCTGT	4887	False	NA	0	True	AATAAA	-14	NA	4580553	4586060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_4580773_4585411_4585583_4585690
transcript_91166.known	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	TRUE	canonical	3	649	junction_5	114.448940580505	1444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	9	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
transcript_91175.known	chr19	+	3816	2	FSM	ENSG00000185361.9	ENST00000327473.9	3816	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTGGCTCATGTCAGTT	-17	True	NA	16	True	AATAAA	-19	NA	4639515	4655568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4639630_4651866
transcript_91176.known	chr19	+	2946	1	FSM	ENSG00000185361.9	ENST00000598107.1	2946	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	4	True	NA	NA	False	NA	NA	NA	4639536	4642482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4639500_4642500
transcript_91187.known	chr19	-	4273	22	FSM	ENSG00000142002.18	ENST00000262960.14	4273	22	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_5	16.4755023252934	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGCCTGAGGTTCCTT	-42	True	NA	-7	True	ATTAAA	-21	NA	4723842	4675226	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4676657_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_91203.nic	chr19	-	2800	16	ISM	ENSG00000142002.18	ENST00000262960.14	4273	22	-4	12876	-4	189	5prime_fragment	FALSE	canonical	3	106	junction_3	12.2702893201424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGGCCAGGCGCGGT	-46	True	NA	-15	True	ATTAAA	-10	NA	4723846	4688102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_91207.known	chr19	-	2025	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	12.0715459748212	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGACTGTCTGTGGTCGC	50	True	NA	-5	True	AATAAA	-35	NA	4723750	4694316	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_91209.known	chr19	-	1909	12	FSM	ENSG00000142002.18	ENST00000601764.5	1909	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	36.2527855869024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGACTGTCTGTGGTCG	-13	True	NA	-6	True	AATAAA	-34	NA	4723813	4694317	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4694824_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_91212.known	chr19	-	2684	2	FSM	ENSG00000127666.11	ENST00000248244.6	2684	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCAGCGCCATTGTCTTC	7	True	NA	-24	True	AATAAA	-16	NA	4831712	4815931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4818517_4831613
transcript_91215.known	chr19	-	2154	8	FSM	ENSG00000105355.9	ENST00000592528.5	2154	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	288.876076813401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	27	False	NA	-45	True	NA	NA	NA	4867653	4838368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852266_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_91216.known	chr19	-	1535	8	FSM	ENSG00000105355.9	ENST00000585479.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	278.185813690734	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGGCTCTCAAAACGG	NA	False	NA	NA	False	NA	NA	NA	4867694	4839061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4839534_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_91233.known	chr19	+	3898	17	FSM	ENSG00000276043.5	ENST00000650932.1	3898	17	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_1	70.0070308969035	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGTGTCTTCCTATT	0	True	NA	2	True	AATAAA	-18	NA	4909500	4962154	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4909656_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_91236.known	chr19	+	2651	17	FSM	ENSG00000276043.5	ENST00000615884.4	2651	17	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	70.8929375449346	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATACATTTTCAGGA	-2	True	NA	NA	False	AAAAAG	-36	NA	4910145	4960961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4910247_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_91239.known	chr19	+	2661	17	FSM	ENSG00000276043.5	ENST00000616255.1	2661	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109.270432156874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTCAAATCTATACA	195	False	NA	NA	False	AAAAAG	-27	NA	4910374	4960952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4910495_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_91271.known	chr19	+	5703	24	FSM	ENSG00000127663.15	ENST00000611640.4	5703	24	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	21.4485800905725	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCGTTCCATGCCCCG	0	True	NA	16	True	ATTAAA	-18	NA	4969112	5153595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119117_5119220_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
transcript_91276.known	chr19	+	5604	23	FSM	ENSG00000127663.15	ENST00000159111.9	5604	23	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	40.6246678308098	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTCCATGCCCCGGCA	0	True	NA	19	True	ATTAAA	-21	NA	4969112	5153598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
transcript_91301.nic	chr19	+	1939	5	ISM	ENSG00000127663.15	ENST00000381759.8	3058	12	-36	70825	-17	1334	5prime_fragment	FALSE	canonical	3	199	junction_3	14.2719129761921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAACAAACACCTGAG	NA	False	NA	NA	False	AAGAAA	-13	NA	4969095	5042515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136
transcript_91313.known	chr19	-	478	4	FSM	ENSG00000105426.18	ENST00000591760.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	73.7427962583465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATCCAGCCGCTGAGGA	-1	True	NA	NA	False	NA	NA	NA	5293252	5273548	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5273584_5274198_5274345_5286049_5286235_5293140
transcript_91315.known	chr19	-	3733	3	FSM	ENSG00000223573.7	ENST00000448587.5	3733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAGTTTAAGCTTCCTA	8912	False	NA	NA	False	AATAAA	-22	NA	5568034	5558166	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5561400_5562081_5562212_5567664
transcript_91317.known	chr19	-	603	2	FSM	ENSG00000223573.7	ENST00000646160.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTGCTTTCTCTCTTTC	5	True	NA	NA	False	AATAAA	-23	NA	5567953	5562635	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5562950_5567664
transcript_91322.known	chr19	+	3042	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_18	245.553537950484	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-11	True	NA	56	True	AATAAA	-26	NA	5623098	5668478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
transcript_91324.known	chr19	+	3014	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_14	147.194802897385	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	8	True	NA	44	True	AATAAA	-14	NA	5623117	5668466	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_91328.known	chr19	-	3167	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_14	38.4765837880652	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGTGCGCGTGCACA	9	True	NA	-19	True	AATAAA	-15	NA	5622776	5586998	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_91335.nic	chr19	+	2579	20	NIC	ENSG00000160633.13	novel	3014	21	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	277.158144601802	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATTTAAAGTGTCAT	NA	False	NA	49	True	AATAAA	-19	NA	5623046	5668471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_91347.known	chr19	+	2708	19	FSM	ENSG00000160633.13	ENST00000589863.5	2708	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	288.555646472411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAACTGTGTAAAAATA	NA	False	NA	-73	True	NA	NA	NA	5623034	5668349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5623395_5626404_5626490_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_91376.known	chr19	-	3092	18	FSM	ENSG00000196365.12	ENST00000360614.8	3092	18	0	0	0	0	multi-exon	TRUE	canonical	3	598	junction_16	81.2653392494106	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGCTTCCTCACCTGCT	-1	True	NA	-6	True	ATTAAA	-14	NA	5720146	5691833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711770_5712003_5713133_5713254_5714182_5714272_5719703
transcript_91377.known	chr19	-	2626	18	FSM	ENSG00000196365.12	ENST00000590729.5	2626	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	188.595904581498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGCAGTGGAGCCACC	687	False	NA	NA	False	NA	NA	NA	5719849	5691954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711818_5712003_5713133_5713254_5714182_5714272_5719703
transcript_91395.known	chr19	+	1697	8	FSM	ENSG00000167733.14	ENST00000339423.7	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	34.3612263685541	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	-4	True	NA	17	True	AATAAA	-19	NA	5681026	5688522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686415_5686528_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_91402.known	chr19	+	1575	7	FSM	ENSG00000167733.14	ENST00000579562.5	1575	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	28.6045839372332	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	6	True	NA	17	True	AATAAA	-19	NA	5681036	5688522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_91410.known	chr19	+	709	6	FSM	ENSG00000167733.14	ENST00000584904.5	709	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	40.102867727882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCGGGAGCTGGACGTGCA	6	True	NA	NA	False	NA	NA	NA	5681036	5687576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684992_5685120_5686899_5686992_5687281_5687376_5687502
transcript_91413.known	chr19	+	1457	6	FSM	ENSG00000167733.14	ENST00000301382.8	1457	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	26.4983018323816	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	-7	True	NA	17	True	AATAAA	-19	NA	5681023	5688522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_91414.known	chr19	+	1553	6	FSM	ENSG00000167733.14	ENST00000577917.5	1553	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	39.0312695156076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	0	True	NA	17	True	AATAAA	-19	NA	5680764	5688522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687915
transcript_91416.known	chr19	+	1641	6	FSM	ENSG00000167733.14	ENST00000578167.5	1641	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	31.3343262254033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	23	True	NA	17	True	AATAAA	-19	NA	5681053	5688522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_91424.known	chr19	+	1540	6	FSM	ENSG00000167733.14	ENST00000581893.5	1540	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	25.160286166894	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	-22	True	NA	17	True	AATAAA	-19	NA	5681008	5688522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684964_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_91428.known	chr19	+	695	5	FSM	ENSG00000167733.14	ENST00000579559.1	695	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	40.0156219494337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCAACTGTCCCTGGAG	-2	True	NA	NA	False	NA	NA	NA	5681158	5687987	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5687281_5687376_5687502_5687669_5687752
transcript_91432.known	chr19	+	1319	5	FSM	ENSG00000167733.14	ENST00000583928.5	1319	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	28.0223125384041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTGTTCGAGAATAAA	6	True	NA	-21	True	NA	NA	NA	5681036	5688484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_91433.known	chr19	+	730	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	23.4236347876812	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	17	True	NA	NA	False	AATAAA	-23	NA	5681047	5685589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
transcript_91441.known	chr19	-	516	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	28.9865869364129	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5	True	NA	-7	True	AATAAA	-15	NA	5680516	5678421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
transcript_91445.known	chr19	+	399	3	FSM	ENSG00000167733.14	ENST00000577701.1	399	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCGAGGAAA	24	True	NA	NA	False	AATAAA	-44	NA	5681054	5685328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684964_5685120_5685301
transcript_91449.known	chr19	-	655	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	233.807613220785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-9	True	NA	-7	True	AATAAA	-15	NA	5680252	5678421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
transcript_91450.known	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	2798.47784022354	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	-1	True	NA	21	True	ATTAAA	-17	NA	5690294	5691875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
transcript_91451.known	chr19	+	556	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	12706	junction_2	881	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	-2	True	NA	37	True	AATAAA	-17	NA	5690315	5691667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5690601_5691318_5691454_5691531
transcript_91452.known	chr19	+	452	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	3309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	10	False	NA	23	True	AATAAA	-3	NA	5690305	5691653	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5690328_5690505_5690601_5691318
transcript_91480.nnic	chr19	-	2147	13	NIC	ENSG00000141994.16	novel	2038	13	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	59.9617933910141	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	NA	False	NA	-3	True	AATAAA	-17	NA	5791268	5785139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790042_5790336_5791043
transcript_91494.known	chr19	-	1355	12	FSM	ENSG00000141994.16	ENST00000320699.12	1355	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	62.626269143043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	11	True	NA	-3	True	AATAAA	-17	NA	5791206	5785139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5790259_5790336_5791043
transcript_91500.known	chr19	-	2301	12	FSM	ENSG00000141994.16	ENST00000589085.5	2301	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	62.62785270057	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	7	True	NA	-3	True	AATAAA	-17	NA	5791210	5785139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789717_5790042_5790336_5791043
transcript_91529.known	chr19	-	566	2	FSM	ENSG00000141994.16	ENST00000589854.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTCTGATGCCATTCCG	7	True	NA	NA	False	NA	NA	NA	5791210	5789936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5790336_5791043
transcript_91530.known	chr19	-	2038	13	FSM	ENSG00000141994.16	ENST00000309061.12	2038	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_5	18.1926419802683	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	10	True	NA	-3	True	AATAAA	-17	NA	5791163	5785139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790046_5790336_5791043
transcript_91531.known	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	1264.17621398284	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	9	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_91534.known	chr19	-	1786	5	FSM	ENSG00000174886.14	ENST00000650663.1	1786	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1176.05428765002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCGGCCGAGCCCCACC	-20	True	NA	NA	False	NA	NA	NA	5903783	5894905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5896184_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_91535.known	chr19	-	431	4	FSM	ENSG00000267740.5	ENST00000585661.1	431	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1369.20147044424	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGACGATGCCACTGGATC	337	False	NA	NA	False	NA	NA	NA	5903703	5867614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5867738_5896452_5896576_5896904_5896998_5903611
transcript_91537.known	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2498	junction_1	205.647486950094	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-27	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
transcript_91544.known	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2801	junction_1	98.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-8	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5896576_5896904_5896998_5903611
transcript_91546.known	chr19	-	2406	4	FSM	ENSG00000174886.14	ENST00000418389.6	2406	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1367.31911255404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	-23	True	NA	NA	False	NA	NA	NA	5903786	5891275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5893291_5896452_5896576_5896904_5896998_5903611
transcript_91558.known	chr19	-	3233	17	FSM	ENSG00000031823.14	ENST00000340578.10	3233	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	180.11138047053	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	0	True	NA	NA	False	ATTAAA	-14	NA	5978140	5916138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
transcript_91560.known	chr19	-	3186	17	FSM	ENSG00000031823.14	ENST00000439268.6	3186	17	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_15	183.115358107942	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	-10	True	NA	NA	False	ATTAAA	-14	NA	5978108	5916138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
transcript_91574.known	chr19	-	1762	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_9	89.1865460705817	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACATTAAGACTTGTC	12	True	NA	-37	True	NA	NA	NA	5978086	5917351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_91578.known	chr19	-	1783	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_9	97.6100177008259	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGACTGGAGACCTCG	5	True	NA	-8	True	NA	NA	NA	5978093	5917322	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_9159.known	chr1	-	2842	10	FSM	ENSG00000132128.18	ENST00000615587.4	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_6	43.8983112248645	3022	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGCCCTTCTTGATG	-1	True	NA	-26	True	AATAAA	-14	NA	46303263	46278402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46279085_46279181_46279258_46279491_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283_46298371_46303123
transcript_91657.known	chr19	-	547	5	FSM	ENSG00000031823.14	ENST00000587479.2	547	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	207.238238508244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACGGGCAGACGACCGG	-2	True	NA	NA	False	GGGGCT	-30	NA	5978142	5917639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5978060
transcript_91659.known	chr19	+	2240	2	FSM	ENSG00000187650.4	ENST00000339485.4	2240	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGCTGGAGTGCAATG	1	True	NA	NA	False	TTTAAA	-20	NA	5904871	5910853	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5905082_5908823
transcript_91665.known	chr19	-	637	6	FSM	ENSG00000130382.9	ENST00000585588.1	637	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.6097324177001	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGACTTCGACCTCTTCTC	9196	False	NA	NA	False	NA	NA	NA	6216968	6213119	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6213171_6213336_6213409_6213725_6213798_6213938_6214039_6216404_6216514_6216735
transcript_91667.known	chr19	+	2410	6	FSM	ENSG00000125656.11	ENST00000245816.11	2410	6	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_2	39.5808034279245	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGCGGTGGCTCACGCC	-37	True	NA	NA	False	AATAAA	-19	NA	6361530	6370242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6361773_6361868_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
transcript_91671.known	chr19	+	1346	5	FSM	ENSG00000125656.11	ENST00000596070.1	1346	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	35.4427355039083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGCTGGGCCTCCTCTC	-3	True	NA	NA	False	NA	NA	NA	6361564	6368707	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6361773_6361868_6362543_6364451_6364640_6366257_6366364_6368537
transcript_91672.known	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	48.8011839564939	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	-6	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
transcript_91674.known	chr19	+	603	4	FSM	ENSG00000125652.8	ENST00000596657.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	271.101866873362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	494	False	NA	11	True	AATAAA	-18	NA	6373470	6375027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6373558_6374202_6374377_6374464_6374590_6374810
transcript_91675.known	chr19	+	556	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	273.45850792315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	727	False	NA	15	True	AATAAA	-22	NA	6373703	6375031	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
transcript_91676.nnic	chr19	+	734	4	NNC	ENSG00000125652.8	novel	970	4	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	256.019530504999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	823	False	NA	11	True	AATAAA	-18	NA	6373799	6375027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_6374018_6374202_6374377_6374464_6374590_6374810
transcript_91683.known	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	23.1641185649031	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-13	True	NA	-35	True	AATAAA	-18	NA	6393164	6379571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
transcript_91702.nnic	chr19	-	2584	21	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	135.438953037891	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTTGCTATTTCTTT	2	True	NA	-3	True	AATAAA	-23	NA	6424811	6413640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_91704.nnic	chr19	-	2422	21	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	-8	154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	135.438953037891	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAGAGCAAAGCAGAAC	-6	True	NA	35	True	ATTAAA	-3	NA	6424819	6413810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_91711.nnic	chr19	-	3496	20	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	-62	154	intron_retention	FALSE	non_canonical	0	0	junction_19	123.047633953712	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAGAGCAAAGCAGAAC	8926	False	NA	35	True	ATTAAA	-3	NA	6424873	6413810	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_91728.nic	chr19	-	1909	11	NIC	ENSG00000125648.15	novel	2056	13	NA	NA	-51	0	combination_of_known_junctions	TRUE	canonical	3	16	junction_2	133.746813046143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	NA	False	NA	-4	True	AATACA	-17	NA	6459843	6436080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6436465_6438446_6438535_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
transcript_91729.nnic	chr19	-	1804	11	NNC	ENSG00000125648.15	novel	3482	10	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	105.831942248076	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTGGTTTTTACTG	6	True	NA	-6	True	AATAAA	-13	NA	6459773	6440066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6440323_6441978_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
transcript_91741.known	chr19	-	3482	10	FSM	ENSG00000125648.15	ENST00000301454.9	3482	10	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	42.9679754419527	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTTTTTACTGAAA	-13	True	NA	-3	True	AATAAA	-16	NA	6459792	6440063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
transcript_91756.nic	chr19	-	3080	9	NIC	ENSG00000125648.15	novel	3482	10	NA	NA	-51	-285	intron_retention	FALSE	canonical	3	88	junction_2	94.6294582833485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAATCCCCAAATTCA	NA	False	NA	NA	False	AAAACA	-15	NA	6459843	6440348	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6442160_6444150_6444302_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
transcript_91767.known	chr19	+	733	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	68.9002902751505	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	9	True	NA	NA	False	TATAAA	-24	NA	6464282	6467221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
transcript_91768.known	chr19	+	1086	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	9.41629792788369	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	-3	True	NA	NA	False	TATAAA	-24	NA	6464270	6467221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
transcript_91771.known	chr19	-	742	4	FSM	ENSG00000125648.15	ENST00000595267.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	20.5426385841741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCAGCAGCTGACGGAT	9	True	NA	NA	False	NA	NA	NA	6459770	6456302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6456532_6457502_6457591_6458197_6458325_6459472
transcript_91772.known	chr19	+	688	1	FSM	ENSG00000275234.1	ENST00000615487.1	688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTTCAGTTCTGATT	4933	False	NA	-16	True	AATAAA	-38	NA	6469464	6470152	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6469500_6470200
transcript_91773.known	chr19	-	2277	4	FSM	ENSG00000104833.12	ENST00000264071.7	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	4.02768199119819	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGCCGAATCCCTCT	0	True	NA	-11	True	AATAAA	-22	NA	6502309	6494318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6496222_6501286_6501398_6501514_6501624_6502155
transcript_91777.known	chr19	-	911	3	FSM	ENSG00000125726.11	ENST00000245903.4	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGTGGCGTGCA	9664	False	6591167	-6	True	ATTAAA	-15	NA	6591150	6585838	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6586406_6590102_6590137_6590840
transcript_91778.nnic	chr19	-	3087	2	NNC	ENSG00000125735.11	novel	4336	4	NA	NA	8792	5078	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTGTGGCGTTTCTCT	9182	False	NA	-4	True	AATAAA	-18	NA	6661325	6656174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6658945_6661008
transcript_91779.nnic	chr19	-	3178	2	NNC	ENSG00000125735.11	novel	4336	4	NA	NA	8785	5078	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTGTGGCGTTTCTCT	9175	False	NA	-4	True	AATAAA	-18	NA	6661332	6656174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6659029_6661008
transcript_91781.nnic	chr19	-	2047	2	NNC	ENSG00000125735.11	novel	4336	4	NA	NA	8714	3960	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCCGGGCGTGGTGGCGG	9104	False	NA	NA	False	AATACA	-6	NA	6661403	6657292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6658945_6661008
transcript_91782.nnic	chr19	-	2060	2	NNC	ENSG00000125735.11	novel	4336	4	NA	NA	8785	3960	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCCGGGCGTGGTGGCGG	9175	False	NA	NA	False	AATACA	-6	NA	6661332	6657292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6659029_6661008
transcript_91784.nic	chr19	-	3847	30	ISM	ENSG00000125730.17	ENST00000245907.11	5231	41	9377	131	-316	0	3prime_fragment	TRUE	canonical	1	4	junction_29	8.3269971948474	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGGAGTTCTTTGCC	9406	False	NA	-1	True	GATAAA	-18	NA	6711273	6677834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_6678024_6678151_6678288_6678371_6678456_6679124_6679209_6679406_6679497_6680157_6680264_6681940_6682031_6682141_6682230_6684387_6684440_6684559_6684651_6684774_6684835_6684987_6685147_6686123_6686288_6686745_6686903_6690628_6690728_6692923_6693084_6693411_6693488_6694430_6694635_6696378_6696466_6696592_6696660_6697343_6697557_6697651_6697795_6702126_6702213_6702470_6702580_6707075_6707274_6707465_6707538_6707799_6707930_6709683_6709843_6710638_6710846_6710986
transcript_91789.known	chr19	-	2009	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	47.2346714485367	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAATAATGACCAAT	11	True	NA	-35	True	NA	NA	NA	6737260	6730085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_91791.known	chr19	-	1834	18	FSM	ENSG00000125734.16	ENST00000597706.5	1834	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.0208950903832	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCAGCTATGTGTACA	29	False	NA	-47	True	NA	NA	NA	6737560	6730097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732471_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_91817.known	chr19	+	1920	14	FSM	ENSG00000125733.18	ENST00000596758.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	195.520001549502	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATACAAAAATGGG	67	False	NA	28	True	NA	NA	NA	6739761	6751464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751033
transcript_91818.known	chr19	+	2035	14	FSM	ENSG00000125733.18	ENST00000313285.12	2035	14	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_7	44.0587289607081	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	-15	True	NA	33	True	TATAAA	-18	NA	6739679	6751526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_91826.known	chr19	+	2068	13	FSM	ENSG00000125733.18	ENST00000595305.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_7	40.3598397750371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	32	True	NA	33	True	TATAAA	-18	NA	6739726	6751526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750634_6751062
transcript_91864.nic	chr19	-	1965	10	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	24.5678702152543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	3	True	NA	-6	True	AATAAA	-17	NA	6767507	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6754933_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91866.known	chr19	-	2281	10	FSM	ENSG00000125731.13	ENST00000245908.11	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	19.94993734326	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCTGTGTACTTTCT	9	True	NA	-1	True	AATAAA	-22	NA	6767435	6752159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91867.nnic	chr19	-	2038	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	30.3221387564504	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	NA	False	NA	-6	True	AATAAA	-17	NA	6767557	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6754933_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91869.nnic	chr19	-	2399	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	27.1502449799101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	NA	False	NA	-6	True	AATAAA	-17	NA	6767535	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91875.nnic	chr19	-	2224	9	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_8	33.6108241493719	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	NA	False	NA	-6	True	AATAAA	-17	NA	6767520	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6767386
transcript_91876.nic	chr19	-	2000	9	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-46	0	combination_of_known_junctions	TRUE	canonical	2	21	junction_7	30.6938002697613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	1	True	NA	-6	True	AATAAA	-17	NA	6767509	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6763679_6763817_6767386
transcript_91886.nic	chr19	-	2551	9	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-57	0	intron_retention	FALSE	canonical	3	60	junction_5	19.9244667431778	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	NA	False	NA	-6	True	AATAAA	-17	NA	6767520	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91891.nic	chr19	-	2439	9	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-48	0	intron_retention	FALSE	canonical	3	60	junction_5	20.9966515187541	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-1	True	NA	-6	True	AATAAA	-17	NA	6767511	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91906.nic	chr19	-	2630	8	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-49	0	intron_retention	FALSE	canonical	3	60	junction_4	20.9606044468071	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-2	True	NA	-6	True	AATAAA	-17	NA	6767512	6752164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91908.known	chr19	-	1750	8	FSM	ENSG00000125731.13	ENST00000595681.5	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	18.1411697753019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCGAGGAAGTCGCGGG	9	True	NA	NA	False	NA	NA	NA	6767435	6753582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6753642_6754051_6754164_6754250_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_91924.known	chr19	+	2892	27	FSM	ENSG00000141968.8	ENST00000602142.6	2892	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.443560099795031	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGGACTGGTGTCGTTC	-9	True	NA	4	True	AATAAA	-15	NA	6772707	6857361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6773012_6820701_6820819_6821621_6821681_6821790_6821860_6822220_6822330_6822418_6822515_6825052_6825122_6825302_6825407_6826611_6826712_6828075_6828172_6828418_6828488_6828621_6828709_6828814_6828901_6829785_6829919_6832090_6832201_6833183_6833286_6833527_6833626_6833710_6833734_6833907_6833954_6836431_6836569_6836984_6837051_6843134_6843167_6847997_6848115_6850669_6850758_6852964_6853080_6853946_6854099_6857053
transcript_91925.known	chr19	+	5759	8	FSM	ENSG00000130544.12	ENST00000252840.11	5759	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.99489470117416	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	5	True	NA	NA	False	ATTAAA	-30	NA	7069702	7087968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_91930.known	chr19	-	9463	22	FSM	ENSG00000171105.14	ENST00000302850.10	9463	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	14.658934263496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATACGCTTGTTTT	-1	True	NA	-12	True	ATTAAA	-16	NA	7294414	7112264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7117411_7119448_7119584_7120619_7120750_7122613_7122774_7122878_7122990_7125282_7125528_7126583_7126652_7128851_7128955_7132157_7132318_7141676_7141817_7142815_7143091_7150496_7150533_7152725_7152928_7163031_7163200_7166153_7166405_7167967_7168095_7170536_7170752_7172289_7172435_7174582_7174732_7184315_7184638_7267344_7267897_7293791
transcript_91932.known	chr19	-	8954	21	FSM	ENSG00000171105.14	ENST00000341500.9	8954	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	11.2883789801725	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTTTTTGTGTGGTGT	523	False	NA	-2	True	ATTAAA	-26	NA	7293931	7112254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7117411_7119448_7119584_7120619_7120750_7122613_7122774_7122878_7122990_7125282_7125528_7126583_7126652_7128851_7128955_7132157_7132318_7141676_7141817_7142815_7143091_7152725_7152928_7163031_7163200_7166153_7166405_7167967_7168095_7170536_7170752_7172289_7172435_7174582_7174732_7184315_7184638_7267344_7267897_7293791
transcript_91945.known	chr19	+	5368	20	FSM	ENSG00000104880.19	ENST00000594665.2	5368	20	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	17.8204339744017	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGAGATGAGCGGTGACT	-9	True	NA	4	True	AATAAA	-4	NA	7395167	7472467	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
transcript_91947.known	chr19	+	5514	20	FSM	ENSG00000104880.19	ENST00000617428.4	5514	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	37.4690269134299	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGTGACTGGCGTGCAC	9	True	NA	13	True	AATAAA	-13	NA	7395185	7472476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7395248_7440188_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
transcript_91950.known	chr19	+	5396	20	FSM	ENSG00000104880.19	ENST00000319670.14	5396	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	42.079465781343	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTGCACGTTCTTGGA	18	True	NA	22	True	AATAAA	-22	NA	7395154	7472485	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464688_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
transcript_91953.known	chr19	-	1078	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.07106781186548	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-12	True	NA	-6	True	ATTAAA	-16	NA	7489035	7476874	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_91956.known	chr19	+	1968	2	FSM	ENSG00000198816.7	ENST00000597229.2	1968	2	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGTCGTGGCTTGCC	1	True	NA	31	True	AGTAAA	-20	NA	7516102	7521025	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7516250_7519204
transcript_91960.known	chr19	+	4617	35	FSM	ENSG00000032444.17	ENST00000221249.10	4617	35	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	74.8938579951515	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	6457	False	NA	24	True	AATAAA	-16	NA	7534003	7561764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7534240_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_91970.known	chr19	+	2084	14	FSM	ENSG00000090674.16	ENST00000264079.11	2084	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	21.8033166143276	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGAGGAGCAGTCCTTGC	-10	True	NA	31	True	AATAAA	-32	NA	7522623	7534009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
transcript_91973.nic	chr19	+	1957	14	NIC	ENSG00000090674.16	novel	2084	14	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_11	40.2571615151197	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	2646	False	NA	12	True	AATAAA	-13	NA	7522582	7533990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530434_7530502_7533522_7533654_7533758
transcript_91980.known	chr19	+	2253	13	FSM	ENSG00000090674.16	ENST00000394321.9	2253	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	20.6940342986948	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	-6	True	NA	12	True	AATAAA	-13	NA	7522670	7533990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
transcript_91997.nic	chr19	+	1108	4	ISM	ENSG00000090674.16	ENST00000601003.1	666	5	-104	599	-41	130	5prime_fragment	FALSE	canonical	3	151	junction_1	8.04155872120988	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATGCTTAGTGTGAGT	2646	False	NA	NA	False	NA	NA	NA	7522582	7527295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760
transcript_91999.known	chr19	+	1178	2	FSM	ENSG00000090674.16	ENST00000596390.1	1178	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTGTAGTGAGCTG	1	True	NA	NA	False	NA	NA	NA	7522634	7525991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7522782_7524960
transcript_92.known	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	2103	junction_1	469	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4568_4780_6057
transcript_92000.known	chr19	+	4457	35	FSM	ENSG00000032444.17	ENST00000450331.7	4457	35	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	89.615480002371	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	16	True	NA	24	True	AATAAA	-16	NA	7534749	7561764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7534903_7535126_7535203_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_92001.known	chr19	+	4372	32	FSM	ENSG00000032444.17	ENST00000600737.6	4372	32	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_18	55.1506686623307	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	-7	True	NA	24	True	AATAAA	-16	NA	7535716	7561764	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_92003.known	chr19	+	4137	17	FSM	ENSG00000076826.10	ENST00000160298.9	4137	17	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	58.6627010970344	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	-11	True	NA	30	True	AATAAA	-16	NA	7595862	7618304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
transcript_92005.nnic	chr19	+	2133	7	NNC	ENSG00000076826.10	novel	4137	17	NA	NA	-2673	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.273299890984	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	NA	False	NA	30	True	AATAAA	-16	NA	7611960	7618304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_7612767_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
transcript_92016.known	chr19	-	2647	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_7	14.6181858664026	1718	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGAGCCTCCTTCCTG	7	True	NA	-2	True	AATACA	-18	NA	7629545	7619524	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
transcript_9206.known	chr1	+	2577	19	FSM	ENSG00000085999.13	ENST00000671528.1	2577	19	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	84.099973576426	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGTGTGGTAAGCC	12	False	NA	19	True	AATAAA	-22	NA	46247699	46278480	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46247747_46248317_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_9207.known	chr1	+	674	5	FSM	ENSG00000173660.12	ENST00000496387.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	2895.09579936485	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	23	True	NA	76	True	AATAAA	-19	NA	46303708	46316776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46303821_46309100_46309128_46309896_46310045_46310154_46310317_46316551
transcript_92075.known	chr19	+	1914	19	FSM	ENSG00000076944.17	ENST00000441779.6	1914	19	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	125.102291479147	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCCTACCTCACCT	-13	True	NA	20	True	AATAAA	-20	NA	7637112	7647872	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640697_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_9208.known	chr1	+	553	4	FSM	ENSG00000173660.12	ENST00000489056.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2812.95325236663	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	12	True	NA	76	True	AATAAA	-19	NA	46303697	46316776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46303821_46309100_46309144_46310154_46310317_46316551
transcript_92083.known	chr19	+	1859	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	124.249214419853	2512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	1	True	NA	21	True	AATAAA	-21	NA	7637126	7647873	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_9211.known	chr1	+	687	2	FSM	ENSG00000173660.12	ENST00000486951.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	5331	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	21	True	NA	NA	False	NA	NA	NA	46303706	46309673	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46303821_46309100
transcript_9215.known	chr1	+	4347	6	FSM	ENSG00000117481.11	ENST00000474844.6	4347	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	8.08455317256309	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	4	True	NA	12	True	AATAAA	-14	NA	46340806	46365018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46340920_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
transcript_92150.known	chr19	+	663	4	FSM	ENSG00000229833.10	ENST00000594797.6	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	2922	junction_1	200.594671470162	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCATTTGAGTGTGAG	-5	True	NA	NA	False	NA	NA	NA	7629792	7631956	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631472
transcript_92152.known	chr19	+	375	5	FSM	ENSG00000229833.10	ENST00000598540.6	375	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	1542.1656039479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	41	False	NA	17	True	AATATA	-26	NA	7629838	7631624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231_7631322_7631472
transcript_92156.known	chr19	+	5508	2	FSM	ENSG00000181029.9	ENST00000596148.3	5508	2	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	0	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTGCTCCTCAATTT	-12	True	NA	12	True	AATAAA	-20	NA	7680832	7687703	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7680879_7682241
transcript_92157.known	chr19	+	765	2	FSM	ENSG00000181029.9	ENST00000426877.2	765	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTCTTGTGTCTTGTG	34	False	NA	30	True	GATAAA	-23	NA	7680878	7682858	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7681027_7682241
transcript_92158.known	chr19	+	790	2	FSM	ENSG00000181029.9	ENST00000317378.5	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGTGTCTTGTGTCTTG	30	False	NA	28	True	GATAAA	-21	NA	7680874	7682856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7681050_7682241
transcript_92159.known	chr19	+	411	2	FSM	ENSG00000181029.9	ENST00000595985.1	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTGTCTTGTGTCT	1350	False	NA	26	True	GATAAA	-19	NA	7682242	7682854	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7682323_7682523
transcript_92160.known	chr19	-	1482	10	FSM	ENSG00000104921.15	ENST00000360067.8	1482	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.36986977843755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCTGGGTCTGGTC	2649	False	NA	-1	True	AATAAA	-41	NA	7699479	7688757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7689431_7690158_7690266_7690405_7690558_7696824_7696915_7697012_7697076_7697235_7697299_7697526_7697590_7698355_7698410_7698740_7698855_7699376
transcript_92171.nic	chr19	+	3932	20	FSM	ENSG00000142459.9	ENST00000538904.7	3903	20	-29	0	-29	0	multi-exon	TRUE	canonical	3	21	junction_12	17.1021049716061	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	-22	True	NA	22	True	AATAAA	-18	NA	7830188	7864976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7857091_7857125_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
transcript_92176.known	chr19	+	3855	19	FSM	ENSG00000142459.9	ENST00000270530.8	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	16.4519502390041	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	22	True	NA	22	True	AATAAA	-18	NA	7830232	7864976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
transcript_92190.nic	chr19	-	2138	7	NIC	ENSG00000183248.12	novel	4467	6	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	60.1350332353963	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCGCTGTCACAGAGA	5	True	NA	-6	True	AATAAA	-22	NA	7874448	7868718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_7869545_7869714_7869918_7872304_7872757_7872848_7872962_7873196_7873300_7873418_7873697_7874285
transcript_92193.known	chr19	+	760	4	FSM	ENSG00000171017.11	ENST00000598224.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.54247233265651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGGCAGGGACCGGG	6	True	NA	NA	False	NA	NA	NA	7888550	7899084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7888601_7893716_7893860_7895598_7895742_7898660
transcript_92195.known	chr19	+	3590	3	FSM	ENSG00000171017.11	ENST00000306708.11	3590	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTTTTGATCTCTTA	-2	True	NA	7	True	AATAAA	-18	NA	7888509	7902016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7888601_7895598_7895742_7898660
transcript_92197.known	chr19	+	531	2	FSM	ENSG00000171017.11	ENST00000600345.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAAGTGCTGGCGGAAC	-5	True	NA	NA	False	NA	NA	NA	7888539	7899130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7888601_7898660
transcript_92201.known	chr19	+	3396	12	FSM	ENSG00000076984.18	ENST00000397983.7	3396	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.1775389782253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCCTTTTCTTCCAC	2	True	NA	0	True	TTTAAA	-44	NA	7903884	7914459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7904069_7905807_7905856_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_92204.known	chr19	+	3430	11	FSM	ENSG00000076984.18	ENST00000397981.7	3430	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	38.8021906598068	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	NA	False	NA	19	True	AATAAA	-19	NA	7903842	7914478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911414_7911579_7912148_7912195_7912296
transcript_92207.known	chr19	+	3375	11	FSM	ENSG00000076984.18	ENST00000397979.4	3375	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	7.44580418759451	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	-6	True	NA	19	True	AATAAA	-19	NA	7903876	7914478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_92223.known	chr19	+	2575	6	FSM	ENSG00000260001.7	ENST00000565886.2	2575	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	20.0499376557634	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGTGCAGTCAGTGAG	-7	True	NA	11	True	AATAAA	-21	NA	7914829	7919097	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7916544_7916621_7916943_7917472_7917600_7917700_7917860_7918056_7918130_7918916
transcript_92226.known	chr19	+	1413	5	FSM	ENSG00000104976.12	ENST00000597584.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	81.8138130146738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	-5	True	NA	33	True	AATAAA	-24	NA	7921014	7923250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7921120_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_92228.known	chr19	+	1520	5	FSM	ENSG00000104976.12	ENST00000221573.11	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	9.90896059130321	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	-5	True	NA	33	True	AATAAA	-24	NA	7920337	7923250	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7920550_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_9223.nnic	chr1	+	1996	16	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_5	125.07004259836	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393762	46413845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46405870_46405953_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_92234.known	chr19	-	1797	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_9	127.884143531036	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATTGCAGAAGAGCAGC	93	False	NA	-25	True	AATAAA	-4	NA	7943635	7926735	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
transcript_92257.known	chr19	-	556	3	FSM	ENSG00000104980.8	ENST00000600000.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	11.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCCGCCTCAGCCTT	-3	True	NA	NA	False	NA	NA	NA	7943666	7937797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7938198_7941101_7941198_7943606
transcript_92258.known	chr19	-	1237	2	FSM	ENSG00000178531.6	ENST00000318978.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTAGCGTGCTGAGT	5	True	NA	-35	True	AATAAA	-25	NA	7926135	7924490	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7925559_7925966
transcript_92259.known	chr19	+	1073	2	FSM	ENSG00000286138.2	ENST00000652364.1	1073	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTATCCCAGCAACTC	252	False	NA	NA	False	GATAAA	-43	NA	7944240	7945400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7944412_7944498
transcript_92264.nnic	chr19	-	2299	6	NNC	ENSG00000066044.15	novel	6054	6	NA	NA	-17	886	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	655.60396582083	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTTTATTT	-41	True	NA	-2	True	ATTAAA	-22	NA	8005676	7962272	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_7963808_7967564_7967701_7973724_7973879_7981082_7981187_7991643_7991832_8005494
transcript_92265.known	chr19	-	6054	6	FSM	ENSG00000066044.15	ENST00000407627.7	6054	6	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_1	117.117035481607	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGTGTAGGGGTGAT	-6	True	NA	1	True	AATAAA	-20	NA	8005641	7958572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
transcript_92316.nnic	chr19	+	2153	13	NIC	ENSG00000090661.12	novel	1826	13	NA	NA	-189	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_2	159.797180478533	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	NA	False	NA	15	True	ATTAAA	-16	NA	8209113	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8210705_8210863_8241340_8241458_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92325.nnic	chr19	+	2184	13	NNC	ENSG00000090661.12	novel	1780	12	NA	NA	-189	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	175.263353430075	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	NA	False	NA	15	True	ATTAAA	-16	NA	8209113	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_8209495_8210705_8210863_8250772_8250921_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92353.nic	chr19	+	2068	12	NIC	ENSG00000090661.12	novel	1803	12	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	131.994678079543	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	NA	False	NA	15	True	ATTAAA	-16	NA	8209113	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8210705_8210863_8251043_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92359.known	chr19	+	1780	12	FSM	ENSG00000090661.12	ENST00000251363.10	1780	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	98.782422232646	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	19	True	NA	15	True	ATTAAA	-16	NA	8209369	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92365.known	chr19	+	1803	12	FSM	ENSG00000090661.12	ENST00000558331.5	1803	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	137.294218666843	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	7	False	NA	15	True	ATTAAA	-16	NA	8209312	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8209495_8210705_8210863_8251109_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92381.known	chr19	+	1637	11	FSM	ENSG00000090661.12	ENST00000559450.5	1637	11	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	109.123599647372	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	5	True	NA	15	True	ATTAAA	-16	NA	8209355	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8209495_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92387.nnic	chr19	+	1747	11	NIC	ENSG00000090661.12	novel	1780	12	NA	NA	-7	0	combination_of_known_splicesites	TRUE	canonical	3	23	junction_9	159.2540109385	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	NA	False	NA	15	True	ATTAAA	-16	NA	8209295	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8261687_8261845_8261929
transcript_92394.nic	chr19	+	1658	11	NIC	ENSG00000090661.12	novel	1803	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	142.754649661578	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	12	False	NA	15	True	ATTAAA	-16	NA	8209317	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8210705_8210863_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92395.nnic	chr19	+	1881	11	NIC	ENSG00000090661.12	novel	1637	11	NA	NA	-159	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	131.571463471377	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	NA	False	NA	15	True	ATTAAA	-16	NA	8209143	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8251043_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_92408.known	chr19	+	1515	10	FSM	ENSG00000090661.12	ENST00000559336.5	1515	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	165.76556404218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	20	True	NA	15	True	ATTAAA	-16	NA	8209370	8262421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8261929
transcript_9241.nnic	chr1	+	1914	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_1	92.9575281556923	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393762	46413845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_92427.known	chr19	-	2787	11	FSM	ENSG00000186994.12	ENST00000330915.7	2787	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	8.17373843476778	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTGTTTTGTTTGGGG	0	True	NA	0	True	AATAAA	-13	NA	8343262	8322583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8322923_8324448_8324548_8324629_8324831_8324950_8325097_8333013_8333231_8333723_8333809_8333909_8334117_8334319_8334420_8334499_8335793_8337794_8337857_8343224
transcript_92431.known	chr19	-	1729	5	FSM	ENSG00000167775.11	ENST00000596002.5	1729	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	701.918086389003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	34	True	NA	-6	True	ATTAAA	-17	NA	8308300	8302126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8303974_8305030_8305806_8308148
transcript_92436.known	chr19	+	1330	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_3	815.075592949649	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCTGAAGTGTGGTT	2	True	NA	25	True	AATAAA	-30	NA	8321495	8323340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
transcript_92439.known	chr19	-	1119	4	FSM	ENSG00000167775.11	ENST00000537716.6	1119	4	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_3	652.793654653257	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-16	True	NA	-6	True	ATTAAA	-17	NA	8308350	8302126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8308148
transcript_92441.known	chr19	+	1523	3	FSM	ENSG00000233927.5	ENST00000449223.3	1523	3	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_2	320.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCAATCTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	8321157	8322946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8321570_8321655_8322092_8322271
transcript_92442.nnic	chr19	-	913	3	NIC	ENSG00000167775.11	novel	1253	5	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	73	junction_2	704.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-44	True	NA	-6	True	ATTAAA	-17	NA	8308378	8302126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_8302606_8302776_8302981_8308148
transcript_92445.known	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_2	75.0866166503725	2858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-24	True	NA	-6	True	ATTAAA	-17	NA	8308358	8302126	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
transcript_92446.known	chr19	-	569	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	792.939625696686	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATCCCTGCCCTCCAG	1	True	NA	-5	True	AATAAA	-13	NA	8321375	8308767	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
transcript_92447.known	chr19	+	334	3	FSM	ENSG00000233927.5	ENST00000417088.2	334	3	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_2	979	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	140	False	NA	77	True	AATAAA	-21	NA	8321633	8322396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8321704_8321952_8322092_8322271
transcript_92449.known	chr19	+	1872	7	FSM	ENSG00000167772.12	ENST00000301455.7	1872	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.89806736219163	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTCTTTGTTCTTGTT	-1	True	NA	23	True	AATAAA	-16	NA	8364154	8374370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8369218_8369333_8371055_8371152_8371240_8371523_8373704
transcript_92450.nic	chr19	+	1998	6	NIC	ENSG00000167772.12	novel	1872	7	NA	NA	-37	0	intron_retention	FALSE	canonical	3	37	junction_3	6.30555310817378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTCTTTGTTCTTGTT	NA	False	NA	23	True	AATAAA	-16	NA	8364117	8374370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8364640_8365953_8366065_8366201_8366320_8369218_8369333_8371055_8371523_8373704
transcript_92451.known	chr19	+	1705	6	FSM	ENSG00000167772.12	ENST00000393962.6	1705	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	17.5658760100372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAGAGTTCTTGGAA	13	False	NA	-16	True	NA	NA	NA	8364168	8374331	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8371055_8371152_8371240_8371523_8373704
transcript_92452.known	chr19	+	909	4	FSM	ENSG00000167772.12	ENST00000598255.5	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	16.0485374896143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGCATAGCATCACG	10	False	NA	NA	False	NA	NA	NA	8364165	8371261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8371055
transcript_92456.known	chr19	+	1590	5	FSM	ENSG00000185236.12	ENST00000328024.11	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_4	166.244360806615	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	-7	True	NA	38	True	NA	NA	NA	8390359	8404434	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
transcript_92462.known	chr19	+	894	4	FSM	ENSG00000185236.12	ENST00000594216.1	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	1445	junction_3	63.4682772904876	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGGATTACAGGCGT	26	True	NA	NA	False	NA	NA	NA	8390392	8402924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484
transcript_92466.known	chr19	+	577	3	FSM	ENSG00000185236.12	ENST00000601897.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	721.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTGCCTGCCACCAC	22	True	NA	NA	False	NA	NA	NA	8390388	8402799	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8390457_8402085_8402280_8402484
transcript_92468.known	chr19	-	1013	3	FSM	ENSG00000269386.6	ENST00000593581.6	1020	3	0	7	0	-6	multi-exon	FALSE	canonical	3	43	junction_2	6.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAAGTGTTCTGAGGTT	-13	True	NA	NA	False	AAAAAG	-23	NA	8390685	8374378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8374609_8376961_8377068_8390008
transcript_92471.nic	chr19	+	1676	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	67.2142841961439	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	-26	True	NA	20	True	AATAAA	-22	NA	8413279	8439017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8413421_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_92472.nic	chr19	+	1468	6	NIC	ENSG00000099785.11	novel	1380	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	82.3261805260028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	-23	True	NA	20	True	AATAAA	-22	NA	8413282	8439017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8413421_8418741_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_92473.nic	chr19	+	2047	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	80.9108150990954	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	-23	True	NA	20	True	AATAAA	-22	NA	8413282	8439017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8413795_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_92474.known	chr19	+	1380	5	FSM	ENSG00000099785.11	ENST00000215555.7	1380	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	59.17083318663	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	-1	True	NA	20	True	AATAAA	-22	NA	8413304	8439017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_92478.known	chr19	+	1192	4	FSM	ENSG00000099785.11	ENST00000381035.8	1192	4	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_3	99.7028919674182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	9126	False	NA	7	True	AATAAA	-9	NA	8413269	8439004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8438387
transcript_92484.known	chr19	+	2568	17	FSM	ENSG00000099783.12	ENST00000348943.7	2568	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1062.72908559755	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	6019	False	NA	17	True	AATAAA	-17	NA	8444766	8489114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_92486.nic	chr19	+	2413	16	NIC	ENSG00000099783.12	novel	2568	17	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1251.56019964416	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	6120	False	NA	17	True	AATAAA	-17	NA	8444867	8489114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_92494.known	chr19	+	2477	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1053.21734382478	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	-5	True	NA	17	True	AATAAA	-17	NA	8444974	8489114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_92504.nic	chr19	+	2530	15	NIC	ENSG00000099783.12	novel	2477	16	NA	NA	-52	0	intron_retention	FALSE	canonical	0	0	junction_3	1261.79900927046	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	6120	False	NA	17	True	AATAAA	-17	NA	8444867	8489114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_92508.known	chr19	+	2458	15	FSM	ENSG00000099783.12	ENST00000620401.4	2458	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1045.09599207588	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	10	True	NA	13	True	AATAAA	-13	NA	8444989	8489110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462590_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_92519.known	chr19	+	2373	14	FSM	ENSG00000099783.12	ENST00000600806.5	2373	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1379.06246774424	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	-3	True	NA	13	True	AATAAA	-13	NA	8444976	8489110	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_92547.known	chr19	-	2307	8	FSM	ENSG00000133250.14	ENST00000393927.9	2307	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_1	40.5829963388207	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGTAACCAGGAGAGGTG	-6	True	NA	NA	False	AATAAA	-17	NA	8514167	8509677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8510765_8510850_8511025_8511485_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
transcript_92555.known	chr19	-	1178	6	FSM	ENSG00000133250.14	ENST00000255616.8	1178	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	12.0266371026983	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCACCTGCGCCTTC	13	True	NA	-3	True	AATACA	-19	NA	8514148	8511334	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
transcript_92560.known	chr19	-	4180	28	FSM	ENSG00000142347.19	ENST00000644032.2	4180	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.55796987404919	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGTGTGGTGGTGCCTG	-5	True	NA	NA	False	AAAAAG	-13	NA	8577442	8520777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8521605_8522376_8522547_8522633_8522830_8525478_8525563_8526452_8526602_8526788_8526936_8527337_8527484_8530195_8530366_8530458_8530574_8536251_8536397_8536498_8536598_8536948_8537056_8539946_8540029_8541905_8541992_8544296_8544465_8545649_8545737_8548035_8548123_8548236_8548318_8550159_8550357_8550561_8550695_8551739_8551875_8552032_8552165_8553138_8553229_8553349_8553438_8554476_8554572_8554653_8554744_8555658_8555797_8577306
transcript_92561.known	chr19	-	4251	26	FSM	ENSG00000142303.14	ENST00000597188.6	4251	26	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	8.60846095420082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGGTGTGTGTGTGTCAG	-15	True	NA	1	True	AATAAA	-28	NA	8610715	8580239	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8581003_8584894_8585055_8585131_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589586_8589888_8589992_8591799_8591864_8591957_8592104_8592762_8592871_8595761_8595904_8596072_8596220_8596306_8596413_8596541_8596586_8596986_8597133_8597233_8597318_8600927_8601146_8603727_8603885_8605011_8605359_8605622_8605810_8608133_8608249_8610643
transcript_92597.known	chr19	-	2458	13	FSM	ENSG00000142303.14	ENST00000595838.5	2458	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	7.77102881791651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCGGTGTGTGTGTGTC	NA	False	NA	-1	True	AATAAA	-26	NA	8592196	8580241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8581003_8584894_8585055_8585131_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589575_8589888_8589992_8591799_8591864_8591957
transcript_92604.nnic	chr19	+	3978	8	NNC	ENSG00000130803.15	novel	4056	7	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_7	53.6595465763131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGATATTTCATTGTTT	-10	True	NA	9	True	AATAAA	-22	NA	9140379	9163412	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113_9162961_9163054
transcript_92609.known	chr19	+	4056	7	FSM	ENSG00000130803.15	ENST00000247956.11	4056	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	21.8784521085626	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	7	True	NA	10	True	AATAAA	-23	NA	9140396	9163413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113
transcript_92610.known	chr19	+	3955	6	FSM	ENSG00000130803.15	ENST00000360385.7	3955	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	60.5243752549334	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTATGGATATTTCATT	7	True	NA	5	True	AATAAA	-18	NA	9140396	9163408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9158825_9158909_9160113
transcript_92611.nic	chr19	+	4592	6	NIC	ENSG00000130803.15	novel	4056	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	157	junction_3	17.2325273828304	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	-10	True	NA	10	True	AATAAA	-23	NA	9140379	9163413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_9140593_9155924_9156042_9156611_9157395_9157979_9158076_9158825_9158909_9160113
transcript_92616.known	chr19	+	4675	7	FSM	ENSG00000188321.14	ENST00000603380.6	4675	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	17.6580167503476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATACACTTCCCAATT	-9	True	NA	NA	False	AATAAA	-24	NA	9324178	9345871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_92617.known	chr19	+	1488	7	FSM	ENSG00000188321.14	ENST00000592896.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	24.6170672501823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTATAAAACACAGGCG	9	True	NA	NA	False	NA	NA	NA	9324196	9342465	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9338018_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_92620.known	chr19	+	967	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	22.9904327927945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	-9	True	NA	NA	False	NA	NA	NA	9324178	9342148	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_92621.known	chr19	+	2991	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	22.3839228018683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	23	False	NA	16	True	AATAAA	-18	NA	9323771	9343843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_92624.known	chr19	+	588	6	FSM	ENSG00000188321.14	ENST00000592298.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	23.8880723374658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTGCAGGGGAAAAC	38	False	NA	NA	False	NA	NA	NA	9324225	9341145	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324405_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101
transcript_92633.known	chr19	+	2732	7	FSM	ENSG00000188321.14	ENST00000317221.11	2732	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.6731920015663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	-9	True	NA	16	True	AATAAA	-18	NA	9324178	9343843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337866_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_92636.known	chr19	-	3653	12	FSM	ENSG00000174652.20	ENST00000651268.1	3653	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	22.9678179450514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGTTAAATCATTCA	-5	True	NA	-19	True	AATAAA	-3	NA	9435571	9412610	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418765_9418896_9419050_9419300_9420064_9420219_9433667_9433784_9434074_9434236_9434797_9434860_9435107_9435194_9435283
transcript_92640.known	chr19	-	3544	11	FSM	ENSG00000174652.20	ENST00000592904.7	3544	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	18.3709009033308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCGTTCATTAGCTA	-7	True	NA	-11	True	AATAAA	-16	NA	9435573	9412428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433667_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
transcript_92647.nic	chr19	-	3111	9	NIC	ENSG00000174652.20	novel	3503	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	19.2382269193395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	9435589	9412597	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9434797_9434860_9435107_9435194_9435283
transcript_92649.known	chr19	-	3100	8	FSM	ENSG00000174652.20	ENST00000592292.5	3100	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	25.2400718004089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGGCAATAAATTTCT	20	True	NA	-36	True	NA	NA	NA	9435504	9412627	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419050_9419300_9420064_9420219_9435107_9435194_9435283
transcript_92655.known	chr19	-	7104	8	FSM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	8.22638859936455	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-6	True	NA	-25	True	AATAAA	-19	NA	9538645	9523222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
transcript_92657.nic	chr19	-	2549	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	4784	0	0	intron_retention	FALSE	canonical	3	14	junction_2	7.56453714527348	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-6	True	NA	NA	False	NA	NA	NA	9538645	9528006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_92659.known	chr19	-	919	6	FSM	ENSG00000130818.12	ENST00000589289.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.3060960503321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTACGAATGGAGGAAT	251	False	NA	NA	False	NA	NA	NA	9538388	9529296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9529637_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_92661.known	chr19	-	2402	6	FSM	ENSG00000130818.12	ENST00000593003.5	2402	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.2889326333361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	49	False	NA	NA	False	NA	NA	NA	9538590	9528006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9536207_9536357_9538258
transcript_92664.known	chr19	+	859	2	FSM	ENSG00000278611.3	ENST00000619671.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTGGTGGTCTCTTCA	0	True	NA	11	True	AATAAA	-22	NA	9538738	9539734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9538999_9539135
transcript_9267.known	chr1	+	2042	15	FSM	ENSG00000117480.16	ENST00000243167.9	2042	15	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_10	74.0064806869876	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	0	True	NA	NA	False	AAGAAA	-3	NA	46394316	46413845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_92674.known	chr19	-	880	6	FSM	ENSG00000171469.11	ENST00000495503.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	51.1804650232879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAGCAGTTCATACA	595	False	NA	NA	False	NA	NA	NA	9621195	9610936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9611337_9614020_9614104_9617048_9617172_9618090_9618180_9619431_9619583_9621161
transcript_9268.nic	chr1	+	2046	15	NIC	ENSG00000117480.16	novel	2042	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_13	105.788680386699	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	-1	True	NA	NA	False	AAGAAA	-3	NA	46394264	46413845	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413122_46413221_46413446
transcript_92680.known	chr19	-	956	6	FSM	ENSG00000171469.11	ENST00000443819.5	956	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	50.9297555462423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTCACACCTAAAGCA	-14	True	NA	NA	False	NA	NA	NA	9621231	9610955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9611337_9614020_9614104_9617044_9617227_9618090_9618180_9619431_9619583_9621161
transcript_92682.known	chr19	-	4419	5	FSM	ENSG00000171469.11	ENST00000424629.5	4419	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.1977535138194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATGCATGTCTATA	9	True	NA	-12	True	AATAAA	-17	NA	9621208	9607325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9619431_9619583_9621161
transcript_92684.known	chr19	-	625	5	FSM	ENSG00000171469.11	ENST00000465974.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	54.4351678604925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATCTTGAAGTTCTCAA	-15	True	NA	NA	False	NA	NA	NA	9621232	9611105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9611337_9614020_9614104_9618090_9618180_9619431_9619583_9621161
transcript_92686.known	chr19	-	326	3	FSM	ENSG00000171469.11	ENST00000485150.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATATGCTTTCATCCAAT	-2	True	NA	NA	False	NA	NA	NA	9621219	9618062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9618180_9619431_9619583_9621161
transcript_92687.known	chr19	-	555	2	FSM	ENSG00000171469.11	ENST00000497409.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATCTCACTCTGTCTCC	9	True	NA	NA	False	NA	NA	NA	9621208	9619074	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9619583_9621161
transcript_92690.known	chr19	+	2413	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	41.4916323558806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-19	True	NA	NA	False	NA	NA	NA	9621486	9635446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
transcript_92693.known	chr19	+	2337	3	FSM	ENSG00000267106.9	ENST00000585797.6	2341	3	4	0	-1	0	multi-exon	FALSE	canonical	3	90	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-20	True	NA	NA	False	NA	NA	NA	9621485	9635446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9621646_9632227_9632418_9633459
transcript_92697.known	chr19	+	551	2	FSM	ENSG00000267106.9	ENST00000591056.2	554	2	2	1	2	-1	multi-exon	FALSE	canonical	3	90	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTCTGTCCTTCCAGGG	13	True	NA	NA	False	NA	NA	NA	9621518	9632651	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9621646_9632227
transcript_92699.known	chr19	+	782	4	FSM	ENSG00000267106.9	ENST00000592851.6	785	4	3	0	-2	0	multi-exon	FALSE	canonical	3	14	junction_3	16.9901932498329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCTGAAAACAGCAGCTA	41	False	NA	NA	False	AATAAA	-16	NA	9621546	9645489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9645073
transcript_92700.known	chr19	-	683	6	FSM	ENSG00000196605.7	ENST00000589412.5	683	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.49307323229917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTCAACCAGTTTCCAA	7002	False	NA	-76	True	AAGAAA	-45	NA	9785996	9758546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9758765_9759859_9759943_9762081_9762166_9763281_9763409_9764935_9765036_9785925
transcript_92702.known	chr19	-	650	2	FSM	ENSG00000196605.7	ENST00000589038.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGTCATGACTATAA	2942	False	NA	2	True	AATAAA	-22	NA	9793180	9787407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9787811_9792933
transcript_92707.known	chr19	-	1920	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	108.435336593853	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-7	True	NA	-2	True	ATTAAA	-29	NA	9819079	9810266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
transcript_92708.known	chr19	-	879	4	FSM	ENSG00000127452.9	ENST00000592067.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	10.4986771653491	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTCAGCTATCTGCAG	-7	True	NA	NA	False	NA	NA	NA	9819079	9811281	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818753
transcript_92711.known	chr19	-	777	4	FSM	ENSG00000127452.9	ENST00000590808.1	777	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	128.222029655161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGACAGGGCTGGATGCTG	10	True	NA	NA	False	NA	NA	NA	9818816	9811307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9814137_9814343_9818544_9818618_9818727
transcript_92715.known	chr19	-	1873	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	2.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCAGTTTATTCAT	-7	True	NA	-5	True	ATTAAA	-26	NA	9819079	9810269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818544_9818618_9818727
transcript_92716.known	chr19	-	1843	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	106.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATTCAGTTTATTCA	-4	True	NA	-6	True	ATTAAA	-25	NA	9819076	9810270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818544_9818618_9818753
transcript_92717.known	chr19	-	544	2	FSM	ENSG00000127452.9	ENST00000586469.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGCCGACCTGAGCAT	-31	True	NA	NA	False	NA	NA	NA	9819103	9811549	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818727
transcript_92718.known	chr19	-	1736	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-3	True	NA	-2	True	ATTAAA	-29	NA	9818829	9810266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818544
transcript_92720.known	chr19	+	407	5	FSM	ENSG00000198258.11	ENST00000586895.6	407	5	0	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	464.183355474967	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-1	True	NA	20	True	AATAAA	-14	NA	9827917	9830115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_92721.known	chr19	+	513	5	FSM	ENSG00000198258.11	ENST00000358666.7	513	5	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	1757.41605418296	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-27	True	NA	20	True	AATAAA	-14	NA	9827891	9830115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9828065_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_92722.known	chr19	+	1450	4	FSM	ENSG00000198258.11	ENST00000589372.1	1450	4	0	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	530.014045935472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	7	True	NA	-19	True	NA	NA	NA	9827925	9830076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836
transcript_92724.nic	chr19	+	644	4	NIC	ENSG00000198258.11	novel	407	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	3585	junction_1	513.840442160794	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTTGTTGTCTCTGT	NA	False	NA	18	True	AATAAA	-12	NA	9827876	9830113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_9827985_9828326_9828676_9828836_9828875_9829964
transcript_92726.known	chr19	+	307	3	FSM	ENSG00000198258.11	ENST00000589960.5	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-23	True	NA	20	True	AATAAA	-14	NA	9827895	9830115	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9827985_9828326_9828394_9829964
transcript_92727.known	chr19	+	573	3	FSM	ENSG00000198258.11	ENST00000588141.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCACTTAGAAAATGGG	-1	True	NA	NA	False	NA	NA	NA	9827917	9828993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9827985_9828326_9828676_9828836
transcript_92734.known	chr19	+	705	6	FSM	ENSG00000127445.14	ENST00000585442.5	705	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	888.590254279215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGAACCCCCCACTC	30	True	NA	NA	False	NA	NA	NA	9835346	9849274	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9836822_9836881_9838016_9838099_9838435_9838649_9848029_9848141_9849089
transcript_92736.known	chr19	+	648	5	FSM	ENSG00000127445.14	ENST00000588695.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	682.261450984885	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	24	True	NA	13	True	ATTAAA	-13	NA	9835340	9849682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_92738.known	chr19	+	536	5	FSM	ENSG00000127445.14	ENST00000589058.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	886.777311392212	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCTCGGGGCAGGGC	52	False	NA	NA	False	NA	NA	NA	9835368	9849214	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089
transcript_92741.known	chr19	+	1009	4	FSM	ENSG00000127445.14	ENST00000247970.9	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	1792	junction_3	45.3725320724628	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCTCATTTCTC	1	True	NA	20	True	ATTAAA	-20	NA	9835317	9849689	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089
transcript_92743.known	chr19	+	878	3	FSM	ENSG00000127445.14	ENST00000587625.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	1884	junction_1	4	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTCCTCTTCAGTCC	6	True	NA	NA	False	NA	NA	NA	9835322	9848614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9838435_9838649_9848029
transcript_92746.known	chr19	+	4022	3	FSM	ENSG00000127445.14	ENST00000586025.5	4022	3	0	0	0	0	multi-exon	FALSE	canonical	3	1792	junction_2	50	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	14	True	NA	13	True	ATTAAA	-13	NA	9835330	9849682	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9838649_9848029_9848141_9849089
transcript_92748.known	chr19	-	1982	6	FSM	ENSG00000105088.9	ENST00000264833.9	1982	6	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_4	46.4955911888428	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	-2	True	NA	-3	True	AATAAA	-20	NA	9936515	9853717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9936303
transcript_92751.known	chr19	-	2124	6	FSM	ENSG00000105088.9	ENST00000593091.2	2124	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	270.058067829865	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	0	True	NA	-3	True	AATAAA	-20	NA	9913836	9853717	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9913482
transcript_92759.nic	chr19	+	2087	10	NIC	ENSG00000130813.18	novel	808	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	84.3274042711568	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTACCAGAGGGGCGTC	-5	True	NA	14	True	AATAAA	-16	NA	10086326	10093242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10086449_10086928_10087053_10087250_10087301_10089110_10089209_10089306_10089379_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
transcript_92766.known	chr19	+	1928	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	39.8241030492021	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	-15	True	NA	15	True	AATAAA	-17	NA	10086316	10093243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
transcript_92767.known	chr19	+	1481	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	66.2635430901272	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCCCTGGCCCCCCAA	8	True	NA	NA	False	AATACA	-33	NA	10086339	10092927	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
transcript_92769.nic	chr19	+	2567	7	NIC	ENSG00000130813.18	novel	2140	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	28	junction_3	66.7618071122172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTACCAGAGGGGCGTC	13	True	NA	14	True	AATAAA	-16	NA	10086344	10093242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10086449_10086928_10087053_10087250_10087301_10089110_10089696_10089897_10090048_10091249_10091631_10092069
transcript_92770.known	chr19	+	2079	7	FSM	ENSG00000130813.18	ENST00000585919.5	2079	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	18.1605494287908	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCGTCTTACCTACCC	137	False	NA	24	True	AATAAA	-26	NA	10086296	10093252	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091631_10092069
transcript_92774.known	chr19	+	2302	12	FSM	ENSG00000130810.20	ENST00000253107.12	2302	12	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_7	68.2340406067284	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATCACTTAAAC	8	True	NA	54	True	NA	NA	NA	10106361	10112012	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10106413_10106500_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_92790.known	chr19	-	1103	11	FSM	ENSG00000130811.12	ENST00000253108.9	1103	11	0	0	0	0	multi-exon	FALSE	canonical	3	1728	junction_5	136.4	1977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTCTTTTTGTTCTTG	8	True	NA	-5	True	AATAAA	-19	NA	10119899	10115013	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116075_10116799_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_92811.nic	chr19	-	2332	10	NIC	ENSG00000130811.12	novel	1103	11	NA	NA	-489	0	intron_retention	FALSE	canonical	3	1728	junction_4	136.701169989665	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTTGGTTCTTTTTGTT	NA	False	NA	-9	True	AATAAA	-15	NA	10120407	10115017	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_92859.known	chr19	-	537	6	FSM	ENSG00000130811.12	ENST00000587681.5	537	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	796.606904313539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGACCTC	-1	True	NA	NA	False	NA	NA	NA	10119908	10118369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_92863.known	chr19	+	1575	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_6	71.4016806524888	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCCCTTCCACTC	15	False	NA	6	True	CATAAA	-8	NA	10106418	10111254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_92864.known	chr19	-	762	5	FSM	ENSG00000130811.12	ENST00000590940.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	885.416109803747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTCTTTTAATTTTTT	207	False	NA	70	True	AATAAA	-37	NA	10119700	10118075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653
transcript_92865.known	chr19	+	757	5	FSM	ENSG00000130810.20	ENST00000444703.1	757	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	283.206086622445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCCACGTCAGCGTTTG	382	False	NA	48	True	AGTAAA	-16	NA	10110145	10111296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10110247_10110323_10110403_10110484_10110615_10110696_10110792_10110944
transcript_92866.known	chr19	-	873	10	FSM	ENSG00000130811.12	ENST00000589454.5	873	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	624.742929847999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGGTGTCCGGCTTTGGC	43	False	NA	NA	False	NA	NA	NA	10119864	10115533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10115586_10115683_10115821_10115966_10116075_10116823_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_92867.known	chr19	-	5274	41	FSM	ENSG00000130816.17	ENST00000359526.9	5274	41	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_36	139.926764326915	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-16	True	NA	42	True	AATAAA	-17	NA	10194953	10133345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_92870.known	chr19	-	5408	40	FSM	ENSG00000130816.17	ENST00000340748.8	5408	40	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_32	84.3584288034732	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	6106	False	NA	42	True	AATAAA	-17	NA	10195135	10133345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_92872.known	chr19	-	6055	39	FSM	ENSG00000130816.17	ENST00000676820.1	6055	39	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_31	85.4543381333983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATAAACCACCCTGGGTG	-18	True	NA	31	True	AATAAA	-6	NA	10194955	10133356	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_92875.known	chr19	-	841	9	FSM	ENSG00000130816.17	ENST00000588952.5	841	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	243.899281210503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCTATCACCTCTA	-5	True	NA	27	True	AAGAAA	-12	NA	10231286	10173089	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10218751_10218870_10231203
transcript_92882.nnic	chr19	-	2596	3	NNC	ENSG00000267534.4	novel	3643	2	NA	NA	-189	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.5	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTGTGGTTGGTGTG	5230	False	NA	-11	True	AATAAA	-13	NA	10231520	10221436	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_10222145_10223376_10224948_10231203
transcript_92883.known	chr19	+	1320	10	FSM	ENSG00000105364.14	ENST00000307422.9	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	330.043805547456	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGGATAAAGATAACTT	-5	True	NA	6	True	AATAAA	-16	NA	10251963	10260043	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10252010_10252145_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
transcript_92884.known	chr19	+	1218	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_8	72.1819532501026	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTCAGTGTCATT	-21	True	NA	18	True	AATAAA	-28	NA	10252213	10260055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
transcript_92885.known	chr19	+	1423	8	FSM	ENSG00000105364.14	ENST00000590669.5	1423	8	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_4	58.4706449984145	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	41	True	NA	NA	False	NA	NA	NA	10252009	10259125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608
transcript_92888.nic	chr19	+	1603	7	ISM	ENSG00000105364.14	ENST00000590669.5	1423	8	-94	0	15	0	intron_retention	FALSE	canonical	3	972	junction_4	61.1766567681933	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	10251915	10259125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412
transcript_92890.known	chr19	+	2967	7	FSM	ENSG00000090339.9	ENST00000264832.8	2967	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	6.92017983067556	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	4	True	NA	4	True	AATAAA	-16	NA	10271119	10286615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782_10285029_10285114
transcript_92895.nic	chr19	+	3171	6	ISM	ENSG00000090339.9	ENST00000264832.8	2967	7	-118	0	-91	0	intron_retention	FALSE	canonical	3	39	junction_2	5.49181208709839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	516	False	NA	4	True	AATAAA	-16	NA	10271001	10286615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782
transcript_92899.known	chr19	+	552	3	FSM	ENSG00000105364.14	ENST00000588963.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_1	52.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGCACATAATAAGTTC	70	False	NA	NA	False	AATAAA	-9	NA	10252304	10253029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10252311_10252396_10252464_10252550
transcript_92901.known	chr19	+	1290	3	FSM	ENSG00000105371.10	ENST00000380770.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCCTGTGACCTAA	-1	True	NA	30	True	AATAAA	-15	NA	10286954	10288520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10287407_10287535_10287839_10287985
transcript_92902.known	chr19	+	1176	3	FSM	ENSG00000105371.10	ENST00000340992.4	1176	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTTCCTTAACCAGC	-20	True	NA	12	True	AATAAA	-41	NA	10286973	10288502	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10287407_10287612_10287839_10287985
transcript_92904.known	chr19	+	1390	2	FSM	ENSG00000105371.10	ENST00000393717.2	1390	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCTGTGACCTAAGG	10	True	NA	32	True	AATAAA	-17	NA	10287003	10288522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10287407_10287535
transcript_92907.known	chr19	+	3029	11	FSM	ENSG00000105376.5	ENST00000221980.5	3029	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5475478405714	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTCCGCTTCTGT	-33	True	NA	NA	False	AATAAA	-16	NA	10289951	10296778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10290126_10291071_10291342_10291488_10291810_10292034_10292323_10292611_10292867_10292997_10293247_10293697_10293944_10294039_10294319_10294400_10294641_10295345_10295613_10296338
transcript_92909.nic	chr19	-	3461	14	NIC	ENSG00000161847.14	novel	3484	13	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	159.890643101713	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTGGCTGGTTCTTG	6082	False	NA	NA	False	ATTAAA	-28	NA	10333581	10316211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320783_10320857_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
transcript_92917.known	chr19	-	3586	13	FSM	ENSG00000161847.14	ENST00000611074.4	3586	13	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_3	36.4062723533551	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATCAGAGTTGGCTG	6025	False	NA	NA	False	ATTAAA	-21	NA	10333638	10316218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
transcript_92931.nic	chr19	-	3625	12	NIC	ENSG00000161847.14	novel	3484	13	NA	NA	-52	0	intron_retention	FALSE	canonical	3	602	junction_2	37.0257895379571	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTGGCTGGTTCTTG	6082	False	NA	NA	False	ATTAAA	-28	NA	10333581	10316211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
transcript_92933.nic	chr19	-	2541	11	NIC	ENSG00000167807.15	novel	1956	11	NA	NA	-17	624	intron_retention	FALSE	canonical	0	0	junction_6	199.613351256874	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCCTGTGATTTGGG	-19	True	NA	-1	True	AATAAA	-20	NA	10316026	10304802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348_10309449_10309556_10310284_10310326_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_92937.nic	chr19	-	2649	10	NIC	ENSG00000167807.15	novel	1956	11	NA	NA	-17	624	intron_retention	FALSE	canonical	0	0	junction_5	202.555586030351	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCCTGTGATTTGGG	-19	True	NA	-1	True	AATAAA	-20	NA	10316026	10304802	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348_10310284_10310326_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_92945.known	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_4	44.4575327950419	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	5	True	NA	-1	True	AATAAA	-18	NA	10339624	10333775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
transcript_92948.nnic	chr19	-	1677	6	NIC	ENSG00000076662.10	novel	1735	7	NA	NA	-196	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	47.9357903867246	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTGGTTTGATTCCA	NA	False	NA	-4	True	AATAAA	-15	NA	10339857	10333778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10334060_10334159_10334409_10334527_10334783_10335670_10335977_10338681_10338949_10339538
transcript_92950.nic	chr19	-	814	5	NIC	ENSG00000267673.6	novel	1012	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	48	junction_1	175.20131278047	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-19	True	NA	-7	True	AATAAA	-13	NA	10316026	10310216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10310606_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_92952.known	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_4	122.427529583832	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-8	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_92962.known	chr19	+	2813	1	FSM	ENSG00000274425.1	ENST00000612689.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTTTATGACTATGAT	158	False	NA	11	True	AATAAA	-22	NA	10333435	10336248	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10333400_10336200
transcript_92963.known	chr19	-	773	4	FSM	ENSG00000267673.6	ENST00000492239.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	231.357347456748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	1303	False	NA	-7	True	AATAAA	-13	NA	10315795	10310216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704
transcript_92964.known	chr19	-	4243	25	FSM	ENSG00000105397.14	ENST00000525621.6	4243	25	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	11.2348663642351	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	3	True	NA	-11	True	AATAAA	-16	NA	10380572	10350532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353527_10353647_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_92974.nnic	chr19	-	3989	23	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	15.3235086502854	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	20	False	NA	-11	True	AATAAA	-16	NA	10380555	10350532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10350969_10351051_10351163_10352925_10353099_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_92978.nic	chr19	-	5394	22	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_16	9.82292196438348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-26	True	NA	-11	True	AATAAA	-16	NA	10380525	10350532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10350969_10351051_10351163_10352433_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_92986.nic	chr19	-	3763	21	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	-43	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_15	8.33966426182733	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGCCTGTGATTTTT	NA	False	NA	-13	True	AATAAA	-14	NA	10380615	10350534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10350969_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_92992.nic	chr19	-	3382	20	ISM	ENSG00000105397.14	ENST00000525621.6	4243	25	35	3378	-12	0	5prime_fragment	FALSE	canonical	3	37	junction_14	7.84616638045652	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGGGTGAGCGTGGC	-38	True	NA	NA	False	NA	NA	NA	10380537	10353910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_93005.nic	chr19	-	3690	7	NIC	ENSG00000105397.14	novel	3176	17	NA	NA	-19	-608	intron_retention	FALSE	canonical	3	37	junction_1	6.99205898780101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATCAGGTAGCCGGGC	31	False	NA	NA	False	NA	NA	NA	10380544	10363187	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_93010.known	chr19	+	4897	15	FSM	ENSG00000065989.16	ENST00000380702.7	4897	15	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_8	9.19960070118396	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGCTGATGTGGCT	20	True	NA	11	True	ATTAAA	-17	NA	10420537	10469630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10421085_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
transcript_93012.known	chr19	+	2583	15	FSM	ENSG00000065989.16	ENST00000293683.9	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.87679200996777	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGACCTCTGTCCCTG	26	True	NA	NA	False	NA	NA	NA	10430844	10467621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10431087_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
transcript_93015.known	chr19	+	2478	15	FSM	ENSG00000065989.16	ENST00000440014.6	2478	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.5813177683257	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGACCTCTGTCCCTG	66	False	NA	NA	False	NA	NA	NA	10432434	10467621	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10432572_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
transcript_93043.known	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_5	125.502093648688	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-11	True	NA	-29	True	AATAAA	-16	NA	10403542	10391132	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
transcript_93044.known	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	69.9795605079718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	1	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
transcript_93053.known	chr19	-	2648	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	105.129253778385	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTCTGGGCTGGAG	827	False	NA	-8	True	AATAAA	-24	NA	10502896	10486125	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_93055.known	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	209.645033330151	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-9	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
transcript_93071.known	chr19	-	2338	2	FSM	ENSG00000180739.15	ENST00000333430.6	2338	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGATCCTTCATTAAA	0	True	NA	NA	False	AATAAA	-16	NA	10517447	10512741	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10515030_10517397
transcript_93072.known	chr19	-	2191	2	FSM	ENSG00000180739.15	ENST00000439028.3	2191	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTCTTTCTTTCTT	20	True	NA	-9	True	AATAAA	-18	NA	10517931	10512946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10515030_10517823
transcript_93073.known	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	28.2958357534754	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10	True	NA	-11	True	AATAAA	-24	NA	10566026	10553084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_93083.known	chr19	-	2545	18	FSM	ENSG00000129347.21	ENST00000478863.5	2545	18	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	24.6817809612411	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	3056	False	NA	NA	False	NA	NA	NA	10565971	10553575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_93100.known	chr19	-	3744	17	FSM	ENSG00000129347.21	ENST00000536689.5	3744	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	25.296291106603	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	19	True	NA	-11	True	AATAAA	-24	NA	10565997	10553084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565791_10565905
transcript_93124.known	chr19	+	1555	10	FSM	ENSG00000130734.10	ENST00000588857.5	1555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	114.188062336861	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGGGGATGAGGGGAAA	12	True	NA	NA	False	NA	NA	NA	10543916	10553067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10546838_10547072_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_93126.known	chr19	+	1963	10	FSM	ENSG00000130734.10	ENST00000309469.9	1963	10	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	50.3714596832103	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	-1	True	NA	30	True	AATAAA	-15	NA	10543903	10553418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10546838_10547116_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_93131.known	chr19	+	1752	10	FSM	ENSG00000130734.10	ENST00000586417.5	1752	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	90.8655226688129	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGGATCTTGAGCTC	-10	True	NA	NA	False	NA	NA	NA	10543894	10553124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544708_10544867_10544956_10545131_10546838_10547116_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_93144.known	chr19	+	1619	9	FSM	ENSG00000130734.10	ENST00000588667.5	1619	9	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_3	107.713740999002	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	66	False	NA	30	True	AATAAA	-15	NA	10543970	10553418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_93165.nic	chr19	+	1981	8	NIC	ENSG00000130734.10	novel	1619	9	NA	NA	-351	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_3	104.788221802698	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	NA	False	NA	30	True	AATAAA	-15	NA	10543543	10553418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10544326_10544782_10544867_10544956_10545131_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_93169.nic	chr19	+	1708	8	NIC	ENSG00000130734.10	novel	1619	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_3	131.683603491746	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	-14	True	NA	30	True	AATAAA	-15	NA	10543890	10553418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10544326_10544708_10544867_10544956_10545131_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_93185.known	chr19	-	2608	18	FSM	ENSG00000129347.21	ENST00000612875.4	2608	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	28.9091166281755	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	-4	True	NA	NA	False	NA	NA	NA	10566020	10553590	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716
transcript_93186.known	chr19	-	1086	3	FSM	ENSG00000129355.7	ENST00000335766.2	1086	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTTGGAAGCTTGT	8322	False	NA	NA	False	NA	NA	NA	10569059	10566600	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10567418_10568512_10568669_10568946
transcript_93187.known	chr19	-	1425	2	FSM	ENSG00000129355.7	ENST00000393599.3	1425	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTGGCTTCTGATTT	-3	True	NA	-2	True	ATTAAA	-23	NA	10568979	10566459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10567418_10568512
transcript_93202.nic	chr19	-	1794	12	NIC	ENSG00000129354.12	novel	1748	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_11	293.352550710343	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	NA	False	NA	-10	True	ATTAAA	-13	NA	10587323	10572670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579859_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587154
transcript_93203.known	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_6	269.205841548743	3666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-36	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
transcript_93253.nic	chr19	+	2919	23	NIC	ENSG00000129353.15	novel	3784	22	NA	NA	-34	-220	combination_of_known_junctions	FALSE	canonical	3	71	junction_22	246.570464171305	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCCGTCTGTCTCAACA	-2	True	NA	32	True	ATTAAA	-15	NA	10625485	10643910	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
transcript_93254.nic	chr19	+	3610	23	NIC	ENSG00000129353.15	novel	3784	22	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_22	246.570464171305	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCCTGGTGTGTTTGT	NA	False	NA	23	True	AATAAA	-17	NA	10625439	10644555	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
transcript_93259.nic	chr19	+	3783	22	NIC	ENSG00000129353.15	novel	3301	22	NA	NA	-40	0	intron_retention	TRUE	canonical	3	240	junction_21	208.469131251625	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	NA	False	NA	25	True	AATAAA	-19	NA	10602416	10644557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_93260.known	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	161.216309388034	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	30	True	NA	18	True	AATAAA	-12	NA	10602509	10644550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_93274.known	chr19	+	3784	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_21	179.389301637389	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	-15	True	NA	25	True	AATAAA	-19	NA	10625524	10644557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_93276.known	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	119.205932829573	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	13	True	NA	25	True	AATAAA	-19	NA	10625552	10644557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_93377.known	chr19	-	1983	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	14	True	NA	-3	True	AATAAA	-21	NA	10653844	10651861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10651900_10653800
transcript_93381.known	chr19	+	6119	20	FSM	ENSG00000129351.17	ENST00000449870.5	6119	20	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_18	443.170021086747	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	NA	False	NA	34	True	AATAAA	-35	NA	10654260	10692417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_93388.nic	chr19	+	3540	20	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	441	junction_18	422.09843806006	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGTCTTAGGCCTGGGT	NA	False	NA	10	True	AATAAA	-15	NA	10654257	10689847	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_93452.known	chr19	+	3671	18	FSM	ENSG00000129351.17	ENST00000407004.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_13	258.947162985025	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	-27	True	NA	40	True	AATACA	-15	NA	10654327	10685765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_93455.known	chr19	+	2622	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_13	202.490958403812	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAAAGCCCACCTTTG	6	True	NA	-66	True	NA	NA	NA	10654360	10684761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_93474.nic	chr19	+	3868	18	NIC	ENSG00000129351.17	novel	2697	19	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	345.79560736962	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	239	False	NA	40	True	AATACA	-15	NA	10654766	10685765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_93477.nic	chr19	+	3772	18	NIC	ENSG00000129351.17	novel	3035	17	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	308.080001293871	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	323	False	NA	40	True	AATACA	-15	NA	10654850	10685765	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_93546.nic	chr19	+	1735	11	ISM	ENSG00000129351.17	ENST00000589998.5	2622	18	-361	3455	-261	0	5prime_fragment	FALSE	canonical	3	1124	junction_1	158.532804176297	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	NA	False	NA	1	True	NA	NA	NA	10653999	10681306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_93555.nic	chr19	+	1481	10	ISM	ENSG00000129351.17	ENST00000589998.5	2622	18	-221	3657	-121	76	5prime_fragment	FALSE	canonical	3	1124	junction_1	164.255747592844	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAACCCAGTGGACT	NA	False	NA	NA	False	AAGAAA	-6	NA	10654139	10681104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018
transcript_93582.known	chr19	+	3219	19	FSM	ENSG00000129351.17	ENST00000590261.5	3219	19	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_17	429.802642765718	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGTCTTAGGCCTGGG	2831	False	NA	9	True	AATAAA	-14	NA	10670605	10689846	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_93600.known	chr19	+	1329	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_6	37.9749755158854	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	-8	True	NA	26	True	NA	NA	NA	10701438	10713365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
transcript_93612.known	chr19	+	1571	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	29.5074143225055	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	NA	False	NA	6	True	GGGGCT	-31	NA	10701429	10713345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
transcript_93635.nic	chr19	+	1715	8	NIC	ENSG00000213339.9	novel	1571	9	NA	NA	-28	0	intron_retention	FALSE	canonical	3	344	junction_4	31.5407090365865	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTGTGTCTGTGTCTT	NA	False	NA	25	True	NA	NA	NA	10701401	10713364	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10701704_10701949_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
transcript_93660.known	chr19	+	2774	21	FSM	ENSG00000079805.19	ENST00000585892.5	2774	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	260.867681976898	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGAGGGGGGCGTGCTC	3	True	NA	NA	False	NA	NA	NA	10718078	10831047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830980
transcript_93667.known	chr19	+	3633	21	FSM	ENSG00000079805.19	ENST00000389253.9	3633	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	193.349547452276	1970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGCCTCTTG	3	True	NA	24	True	AATAAA	-29	NA	10718078	10831903	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
transcript_93668.nic	chr19	+	3974	21	NIC	ENSG00000079805.19	novel	3633	21	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	249.756901806537	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGTGGCTCATGCCTA	19	False	NA	9	True	AATAAA	-13	NA	10717992	10833484	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10832303
transcript_93678.known	chr19	+	3588	20	FSM	ENSG00000079805.19	ENST00000359692.10	3588	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	274.150331811094	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGACGCTGCTGGTGG	17	True	NA	5	True	AATAAA	-10	NA	10718092	10831884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
transcript_93721.known	chr19	+	2195	8	FSM	ENSG00000079805.19	ENST00000682524.1	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_6	56.5981178024103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCTATCTCAAAAAAAAAC	-21	True	NA	NA	False	NA	NA	NA	10718054	10794734	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719
transcript_93728.known	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	8.80656320908194	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-5	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
transcript_93731.known	chr19	+	3295	16	FSM	ENSG00000142453.12	ENST00000327064.9	3295	16	0	0	0	0	multi-exon	TRUE	canonical	3	1188	junction_14	142.9970629069	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGAAAGTAGCAGAATC	7	True	NA	20	True	AATAAA	-22	NA	10871552	10923075	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919876_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921374_10921444_10921614
transcript_93733.known	chr19	+	2722	15	FSM	ENSG00000142453.12	ENST00000344150.8	2722	15	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_14	309.447112292428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAAG	21	False	NA	31	True	NA	NA	NA	10871702	10922721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919876_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921614
transcript_93746.known	chr19	-	2111	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	32.4379750018743	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	-2	True	NA	-19	True	AATAAA	-14	NA	10928639	10922192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_93747.known	chr19	-	2087	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_9	88.7311099701971	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	17	False	NA	-11	True	AATAAA	-22	NA	10928681	10922184	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
transcript_93760.nic	chr19	-	2077	9	NIC	ENSG00000130733.11	novel	2111	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	105.384711889344	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	6	False	NA	-19	True	AATAAA	-14	NA	10928692	10922192	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927798_10927960_10928379_10928441_10928510
transcript_93800.nic	chr19	+	1662	3	NIC	ENSG00000142444.7	novel	859	2	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	88.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGGTGGTAAAACAACTA	-4	True	NA	-14	True	AATAAA	-1	NA	10928720	10933515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10928917_10929013_10930325_10933360
transcript_93801.known	chr19	+	1347	2	FSM	ENSG00000142444.7	ENST00000270502.7	1347	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTATTCTCTCTCGTTT	9	True	NA	31	True	AATAAA	-27	NA	10928810	10930254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10928917_10929013
transcript_93802.known	chr19	+	5577	35	FSM	ENSG00000127616.20	ENST00000344626.10	5577	35	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_26	316.845661182824	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	-36	True	NA	17	True	AATAAA	-18	NA	10961029	11062273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_93803.known	chr19	+	5457	34	FSM	ENSG00000127616.20	ENST00000645460.1	5457	34	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	225.685015795142	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACAGCCTTGCCTGCA	-23	True	NA	15	True	AATAAA	-16	NA	10961042	11062271	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_93804.known	chr19	+	5739	34	FSM	ENSG00000127616.20	ENST00000590574.6	5739	34	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	259.163937962303	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	9	True	NA	17	True	AATAAA	-18	NA	10961320	11062273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961730_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_93856.nic	chr19	+	2205	10	ISM	ENSG00000127616.20	ENST00000642628.1	5637	35	-199	65887	-174	10072	5prime_fragment	FALSE	canonical	3	809	junction_1	175.262624807233	7655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTGTGCTGGGCCTGGC	NA	False	NA	54	True	AAAAAG	-15	NA	10960757	10996376	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212
transcript_93896.known	chr19	+	3144	18	FSM	ENSG00000130164.14	ENST00000558013.5	3144	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	77.7015851329941	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCCGAATCATGACCCA	15	True	NA	NA	False	NA	NA	NA	11089477	11131812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131286
transcript_939.known	chr1	-	1868	14	FSM	ENSG00000127054.22	ENST00000421495.6	1868	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_13	163.10536762089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTACTTGGTACTCT	20	True	NA	-21	True	AGTAAA	-9	NA	1324637	1311605	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1314106_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1324580
transcript_93916.nic	chr19	+	3749	17	NIC	ENSG00000130164.14	novel	5173	18	NA	NA	-32	-777	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	68.0954924627908	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCATGGTGCATCAGCA	0	True	NA	NA	False	AAAACA	-9	NA	11089429	11132744	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_11089616_11100222_11100346_11102663_11102787_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_93918.known	chr19	+	2768	17	FSM	ENSG00000130164.14	ENST00000535915.5	2768	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	78.82327939765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGACCAGGATGACACC	0	True	NA	NA	False	NA	NA	NA	11089462	11131538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11089616_11100222_11100346_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_93955.known	chr19	-	833	5	FSM	ENSG00000161888.12	ENST00000592967.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.6484977572217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAGAAGGCAGAGG	9151	False	NA	NA	False	AAAAAG	-40	NA	11155765	11146021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11146431_11147869_11147895_11148012_11148118_11149093_11149239_11155616
transcript_93958.known	chr19	+	1881	3	FSM	ENSG00000130164.14	ENST00000557958.1	1881	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCGTCTCAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	11089462	11104268	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11089616_11100222_11100346_11102663
transcript_93959.known	chr19	+	5337	18	FSM	ENSG00000130164.14	ENST00000252444.9	5337	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	74.7488991482512	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTGTCTAAACTCGAT	30	False	NA	15	True	ATTAAA	-14	NA	11090598	11133816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11090920_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_93960.known	chr19	-	2315	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-26	1	-1	-1	multi-exon	FALSE	canonical	3	8	junction_1	9.86154146165801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	9108	False	NA	-15	True	AATAAA	-22	NA	11155808	11145493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_93961.known	chr19	-	832	5	FSM	ENSG00000161888.12	ENST00000591396.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.3970762682174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGCCTGGTGTGGTG	9152	False	NA	-39	True	ATTAAA	-1	NA	11155764	11145922	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11146280_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_93962.known	chr19	-	699	4	FSM	ENSG00000161888.12	ENST00000585486.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6.97614984548545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGGCCAAGTGTGGTAC	9147	False	NA	NA	False	AATAAA	-13	NA	11155769	11147598	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11147895_11148012_11148118_11149093_11149239_11155616
transcript_93969.nic	chr19	-	5470	14	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-40	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	65.1827653556389	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	5947	False	NA	NA	False	AATAAA	-18	NA	11197588	11164269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11196049_11196228_11197484
transcript_93986.nic	chr19	-	5323	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	53.6456351129024	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	5916	False	NA	NA	False	AATAAA	-18	NA	11197619	11164269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
transcript_93989.known	chr19	-	5183	13	FSM	ENSG00000197256.11	ENST00000586659.6	5183	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	58.8380545792149	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-4	True	NA	NA	False	AATAAA	-18	NA	11197545	11164269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195621_11195821_11197484
transcript_93999.nic	chr19	-	4020	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-71	736	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	53.6456351129024	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACAAATTACCCAGAAAC	5916	False	NA	NA	False	AAGAAA	-12	NA	11197619	11165572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
transcript_94.known	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	1408	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4003_4081_6057
transcript_94008.nic	chr19	-	3864	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-71	580	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	53.6456351129024	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACTAGCCAGGCGT	5916	False	NA	NA	False	AAGAAA	-1	NA	11197619	11165728	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
transcript_94017.nnic	chr19	-	5058	12	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	55.3941548964709	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	5916	False	NA	NA	False	AATAAA	-18	NA	11197619	11164269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11197484
transcript_94021.nnic	chr19	-	3703	12	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-19	736	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	55.3941548964709	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACAAATTACCCAGAAAC	-26	True	NA	NA	False	AAGAAA	-12	NA	11197567	11165572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11197484
transcript_94038.nic	chr19	-	6523	49	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_27	34.8100999072906	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	-8	True	NA	-7	True	TTTAAA	-18	NA	11262524	11199294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297_11229391_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
transcript_94039.nic	chr19	-	6535	49	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	35.100945697928	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	-8	True	NA	-7	True	TTTAAA	-18	NA	11262524	11199294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11232184_11232290_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
transcript_94042.known	chr19	-	6430	48	FSM	ENSG00000130158.14	ENST00000294618.12	6430	48	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	36.0494981879308	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	-8	True	NA	-7	True	TTTAAA	-18	NA	11262524	11199294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
transcript_94063.nic	chr19	-	2163	5	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCAGACGTGGTGGC	-8	True	NA	NA	False	AAAACA	-28	NA	11262524	11247257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11248152_11250873_11251087_11252118_11252959_11253638_11253727_11262396
transcript_94065.known	chr19	-	3152	4	FSM	ENSG00000130158.14	ENST00000585609.1	3152	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCAGACGTGGTGGC	-6	True	NA	NA	False	AAAACA	-28	NA	11262481	11247257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11248152_11250873_11252959_11253638_11253727_11262396
transcript_94067.known	chr19	+	1049	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.4621977685614	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	-5	True	NA	8	True	AATAAA	-21	NA	11346518	11354944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
transcript_94078.known	chr19	-	4240	5	FSM	ENSG00000105514.8	ENST00000222120.8	4240	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	24.2009813850596	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGTGCTTTTATTTC	-34	True	NA	-27	True	AAGAAA	-24	NA	11339657	11322067	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11325586_11335446_11335572_11335664_11335784_11337171_11337461_11339468
transcript_94083.known	chr19	-	628	4	FSM	ENSG00000105518.14	ENST00000591677.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	340.165972561761	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGCACCACAGCTGCCAT	185	False	NA	NA	False	NA	NA	NA	11346305	11343063	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346007
transcript_94085.known	chr19	-	792	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	134.127634073752	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-18	True	NA	-2	True	AATAAA	-17	NA	11346300	11342775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
transcript_94086.known	chr19	-	677	4	FSM	ENSG00000105518.14	ENST00000586590.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	310.494587535578	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346207
transcript_94087.known	chr19	-	1003	4	FSM	ENSG00000105518.14	ENST00000586956.5	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	346.760243780435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-3	True	NA	-4	True	AATAAA	-15	NA	11346285	11342777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346007
transcript_94088.known	chr19	-	840	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	289.304145993259	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGGCTGCTGTCTT	-7	True	NA	-11	True	AATAAA	-8	NA	11346248	11342784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
transcript_94089.known	chr19	-	788	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	342.992063400242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	11	True	NA	-5	True	AATAAA	-14	NA	11346271	11342778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
transcript_94096.known	chr19	-	593	3	FSM	ENSG00000105518.14	ENST00000586218.5	593	3	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_2	355.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-2	True	NA	-2	True	AATAAA	-17	NA	11346210	11342775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11346126
transcript_94097.known	chr19	-	1256	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_1	17	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519
transcript_94098.known	chr19	-	1310	2	FSM	ENSG00000105518.14	ENST00000588321.1	1310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGCATGCTAATAAATG	234	False	NA	-36	True	NA	NA	NA	11346256	11342809	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343101_11345237
transcript_94099.known	chr19	+	2727	10	FSM	ENSG00000105520.11	ENST00000251473.9	2727	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_8	8.31924735437106	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCCATCTGCCTTCCT	6601	False	NA	26	True	AATAAA	-44	NA	11355385	11365698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359531_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363820_11364160_11364213_11364346
transcript_94100.known	chr19	+	2552	10	FSM	ENSG00000105520.11	ENST00000591608.2	2556	10	0	4	0	-4	multi-exon	FALSE	canonical	3	7	junction_3	20.9926500953236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTGGCCATCTGCCT	0	True	NA	22	True	AATAAA	-40	NA	11355497	11365694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359606_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363836_11364160_11364213_11364346
transcript_94103.known	chr19	+	1662	2	FSM	ENSG00000173928.4	ENST00000312423.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32	False	NA	NA	False	NA	NA	NA	11374706	11376951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11374930_11375512
transcript_94112.known	chr19	-	2303	19	FSM	ENSG00000205517.13	ENST00000562663.5	2303	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	54.0348538639531	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGCGCCTGGTCGGGAA	2580	False	NA	NA	False	NA	NA	NA	11419273	11384340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11384645_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415946_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_94120.known	chr19	-	2278	19	FSM	ENSG00000205517.13	ENST00000393423.7	2278	19	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	43.745475956568	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGAGGCCACTGTGCTG	3	True	NA	NA	False	NA	NA	NA	11419328	11394324	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399970_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_94150.nic	chr19	-	2421	18	NIC	ENSG00000205517.13	novel	2511	19	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_17	34.8017618772065	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	3254	False	NA	-5	True	NA	NA	NA	11418599	11394059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418506
transcript_94151.nnic	chr19	-	2423	18	NNC	ENSG00000205517.13	novel	2511	19	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_17	41.4011517149197	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	3226	False	NA	-5	True	NA	NA	NA	11418627	11394059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418532
transcript_94155.nic	chr19	-	2699	18	NIC	ENSG00000205517.13	novel	2511	19	NA	NA	-6	0	intron_retention	FALSE	canonical	3	70	junction_17	32.6929724838074	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	-3	True	NA	-5	True	NA	NA	NA	11419334	11394059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11417060_11418670_11418785_11419245
transcript_94175.nic	chr19	-	2704	18	ISM	ENSG00000205517.13	ENST00000380456.8	2511	19	-73	2603	-59	581	5prime_fragment	FALSE	canonical	3	70	junction_17	34.0503392866552	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTCCACGGACAAGTGA	2466	False	NA	NA	False	TTTAAA	-19	NA	11419387	11396662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_94284.known	chr19	-	771	3	FSM	ENSG00000205517.13	ENST00000568420.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGCCGAGGCAGG	8	True	NA	NA	False	NA	NA	NA	11419305	11416462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11417060_11418670_11418785_11419245
transcript_94285.nic	chr19	-	1554	2	ISM	ENSG00000205517.13	ENST00000568420.1	771	3	-76	-246	-53	-178	intron_retention	FALSE	canonical	3	92	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCAGGAGTCATATTCT	2472	False	NA	NA	False	NA	NA	NA	11419381	11416216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_11417060_11418670
transcript_94286.known	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	18.5736262435943	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-1	True	NA	-29	True	AATAAA	-17	NA	11384314	11377206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_94287.known	chr19	-	2086	7	FSM	ENSG00000187266.14	ENST00000592375.6	2086	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_6	15.0268278607148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTATGTTAAACAGCTC	1	True	NA	-30	True	NA	NA	NA	11384312	11377624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_94288.known	chr19	-	2133	8	FSM	ENSG00000187266.14	ENST00000588681.5	2133	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	35.6124261734466	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTACCATGATTTCT	2	True	NA	NA	False	NA	NA	NA	11384342	11377762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11382846_11383233_11384092
transcript_94306.nic	chr19	+	2431	18	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	-5	0	intron_retention	FALSE	canonical	3	536	junction_11	160.913030734641	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	-5	True	NA	28	True	AATAAA	-19	NA	11435278	11450968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_94315.known	chr19	+	2096	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_11	200.409805063021	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	-9	True	NA	28	True	AATAAA	-19	NA	11435634	11450968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_94319.known	chr19	+	2063	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	236.682331304128	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	-9	True	NA	25	True	AATAAA	-16	NA	11435634	11450965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_94374.known	chr19	-	2123	13	FSM	ENSG00000198003.12	ENST00000356392.9	2123	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.2845237853262	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-9	True	NA	-8	True	AATAAA	-15	NA	11435121	11420604	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11420948_11421127_11421213_11421676_11421833_11422470_11422628_11422700_11422862_11423876_11424030_11426143_11426267_11426445_11426572_11426682_11426785_11426872_11427041_11430698_11430777_11430898_11431021_11434772
transcript_94377.known	chr19	+	1898	17	FSM	ENSG00000130175.10	ENST00000589838.5	1898	17	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_10	162.2985169179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	62	False	NA	0	True	NA	NA	NA	11436117	11450940	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_94378.nic	chr19	-	2125	9	NIC	ENSG00000161914.10	novel	2154	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.0241894934204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCCCTAGGCCTGA	-7	True	NA	-9	True	ATTAAA	-16	NA	11505846	11483426	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11483860_11484079_11484142_11485655_11485771_11486768_11486881_11486986_11487159_11487291_11487904_11495949_11496166_11498295_11498340_11505487
transcript_94380.known	chr19	-	2154	9	FSM	ENSG00000161914.10	ENST00000293771.10	2154	9	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_5	6.42139976952066	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTTCCCCTAGGCCT	0	True	NA	-11	True	ATTAAA	-14	NA	11505839	11483428	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11483860_11484041_11484142_11485655_11485771_11486768_11486881_11486986_11487159_11487291_11487904_11495949_11496166_11498295_11498340_11505487
transcript_94382.known	chr19	-	2016	8	FSM	ENSG00000161914.10	ENST00000590548.5	2016	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	5.43608502584013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTGACCACTGACCGC	18	False	NA	NA	False	NA	NA	NA	11505821	11483681	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11483860_11484041_11484142_11485655_11485771_11486768_11486881_11486986_11487904_11495949_11496166_11498295_11498340_11505487
transcript_94384.known	chr19	-	4742	7	FSM	ENSG00000196361.10	ENST00000359227.8	4742	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTGGGTGATCTCTGCA	1	True	NA	0	True	AATAAA	-16	NA	11481046	11451325	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11454878_11457109_11457149_11458060_11458287_11458457_11458612_11466171_11466276_11466607_11466828_11480599
transcript_94385.known	chr19	-	1223	7	FSM	ENSG00000196361.10	ENST00000438662.6	1223	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACGTCCCTGCGGAAG	422	False	NA	NA	False	NA	NA	NA	11480625	11454402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11454857_11457109_11457149_11458060_11458287_11458457_11458612_11466171_11466276_11466607_11466828_11480599
transcript_94399.known	chr19	-	1647	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	31.5588210120953	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	3	True	NA	-13	True	AATAAA	-31	NA	11529134	11505928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_94404.nic	chr19	-	1580	7	FSM	ENSG00000130159.15	ENST00000585318.6	1510	7	-54	-16	-14	0	multi-exon	FALSE	canonical	3	20	junction_6	98.2847337529532	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	6931	False	NA	-13	True	AATAAA	-31	NA	11529186	11505928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11529061
transcript_94405.nic	chr19	-	1858	7	NIC	ENSG00000130159.15	novel	1647	8	NA	NA	-33	0	intron_retention	FALSE	canonical	3	215	junction_4	33.825122156304	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	6912	False	NA	-13	True	AATAAA	-31	NA	11529205	11505928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11506429_11507456_11507563_11507701_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_94406.known	chr19	-	1501	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	102.335640582025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	0	True	NA	-13	True	AATAAA	-31	NA	11529137	11505928	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_94407.known	chr19	-	970	6	FSM	ENSG00000130159.15	ENST00000417981.6	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	104.803435058208	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATCTGCAGGCGCCT	6945	False	NA	-86	True	NA	NA	NA	11529172	11506001	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11519074_11519194_11529061
transcript_94408.known	chr19	-	1286	6	FSM	ENSG00000130159.15	ENST00000592312.5	1286	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	104.91787264332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCACCCGGGAGCT	13	True	NA	NA	False	NA	NA	NA	11529124	11506300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11508049_11513055_11513280_11513803_11514222_11529061
transcript_94418.known	chr19	+	1499	7	FSM	ENSG00000130176.8	ENST00000252456.7	1499	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	12.5565388012249	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	-1	True	NA	16	True	AATAAA	-16	NA	11538850	11550323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11538991_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_94419.nic	chr19	+	1520	7	NIC	ENSG00000130176.8	novel	565	5	NA	NA	-33	0	intron_retention	FALSE	canonical	3	24	junction_1	37.5396087116291	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	1009	False	NA	16	True	AATAAA	-16	NA	11539860	11550323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_11540022_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_9442.known	chr1	+	398	2	FSM	ENSG00000232022.8	ENST00000635606.2	492	2	94	0	62	0	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	41	False	NA	7	True	AATAAA	-21	NA	46442923	46482493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46443038_46482209
transcript_94424.known	chr19	-	1019	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_3	78.661016746261	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	-3	True	NA	-13	True	AATAAA	-18	NA	11559236	11553042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
transcript_94428.known	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	8.09835374217089	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1751	False	NA	-6	True	AATAAA	-22	NA	11578985	11574659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
transcript_94429.nic	chr19	-	1755	7	NIC	ENSG00000102575.13	novel	1630	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	10.382945418115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1733	False	NA	-6	True	AATAAA	-22	NA	11579003	11574659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578765_11578843
transcript_94430.nic	chr19	-	1660	6	ISM	ENSG00000102575.13	ENST00000218758.9	1630	7	156	0	94	0	3prime_fragment	FALSE	canonical	3	18	junction_2	6.41872261435249	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1907	False	NA	-6	True	AATAAA	-22	NA	11578829	11574659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584
transcript_94431.known	chr19	-	1527	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	9.55824251627882	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	1750	False	NA	-37	True	NA	NA	NA	11578986	11574690	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
transcript_94433.nic	chr19	-	1873	5	NIC	ENSG00000102575.13	novel	1630	7	NA	NA	94	0	intron_retention	FALSE	canonical	3	18	junction_2	6.60965203320114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1907	False	NA	-6	True	AATAAA	-22	NA	11578829	11574659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11575253_11576242_11576589_11576715_11577318_11577592_11577680_11578584
transcript_94436.known	chr19	+	2803	4	FSM	ENSG00000198551.10	ENST00000361113.10	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	4.54606056566195	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGCTCAGAAGAATTT	13	True	NA	40	True	CATAAA	-23	NA	11597482	11619161	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616694
transcript_94439.known	chr19	-	2396	4	FSM	ENSG00000197933.13	ENST00000341191.11	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCTTTTGTTTTGTG	-10	True	NA	-3	True	ATTAAA	-18	NA	11738946	11721264	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11723343_11724193_11724255_11725200_11725328_11738816
transcript_94440.known	chr19	+	2441	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.98887651569859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAACCACAAAGAT	-20	True	NA	NA	False	NA	NA	NA	11887781	11906696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
transcript_94442.known	chr19	+	569	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	16	True	NA	NA	False	NA	NA	NA	11887817	11904902	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
transcript_94445.known	chr19	+	2621	4	FSM	ENSG00000197054.12	ENST00000343949.9	2621	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6	True	NA	NA	False	NA	NA	NA	11965053	11980381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11965212_11977028_11977165_11977370_11977432_11978115
transcript_94450.known	chr19	-	2338	5	FSM	ENSG00000197647.13	ENST00000419886.7	2338	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.5974135047432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	11	True	NA	-4	True	AATAAA	-29	NA	12035688	12014715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12034827_12034875_12035536
transcript_94456.known	chr19	+	523	4	FSM	ENSG00000219665.8	ENST00000589551.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	49.7348525237137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGAATCGCTTGAAC	75	False	NA	NA	False	NA	NA	NA	11987766	12003595	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11987824_11990168_11990382_12001773_12001823_12003391
transcript_94458.known	chr19	+	6588	4	FSM	ENSG00000223547.10	ENST00000439326.8	6588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCCAAGTTATTGG	1	True	NA	13	True	ATTAAA	-22	NA	12064730	12081565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12064877_12074030_12074158_12074360_12074422_12075311
transcript_94459.known	chr19	+	686	4	FSM	ENSG00000214189.9	ENST00000596883.2	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	36.8510515453766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCGCCTCAGAACTTCA	85	False	NA	NA	False	NA	NA	NA	12092386	12111660	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12092471_12093835_12093896_12110304_12110432_12111245
transcript_94461.known	chr19	+	1994	4	FSM	ENSG00000214189.9	ENST00000430298.7	1994	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	41.4835978296108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAATGTAAACAGTGT	166	False	NA	NA	False	NA	NA	NA	12092467	12113048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12092471_12110304_12110432_12110633_12110695_12111245
transcript_94464.known	chr19	-	642	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	9.46337971105226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGTACAGAAACCT	3623	False	NA	NA	False	GATAAA	-30	NA	12140315	12133667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
transcript_94465.known	chr19	-	3004	4	FSM	ENSG00000132010.16	ENST00000334213.10	3004	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	3.39934634239519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTATGTTTGCAATT	-3	True	NA	NA	False	ATTAAA	-31	NA	12140350	12131349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179
transcript_94468.known	chr19	+	622	3	FSM	ENSG00000219665.8	ENST00000489336.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	20	False	NA	5	True	AATAAA	-20	NA	11987670	12003811	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11987824_12001773_12001823_12003391
transcript_94470.nic	chr19	+	3488	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	0	1350	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	22.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTATTTCAGATATTA	-4	True	NA	7	True	ATTAAA	-18	NA	12092262	12114398	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_94472.nic	chr19	+	3848	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	0	1710	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTCTGATCCCACA	-4	True	NA	37	True	NA	NA	NA	12092262	12114758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_94474.known	chr19	-	1702	4	FSM	ENSG00000257591.6	ENST00000439556.3	1702	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.0332779621949	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCAGGTGT	-5	True	NA	NA	False	ACTAAA	-4	NA	12156734	12144889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12146225_12147394_12147456_12147675_12147803_12156555
transcript_94475.known	chr19	-	2322	4	FSM	ENSG00000197647.13	ENST00000344980.11	2322	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.5521135891752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-11	True	NA	-4	True	AATAAA	-29	NA	12035710	12014715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018302_12035536
transcript_94476.known	chr19	+	3601	4	FSM	ENSG00000196646.12	ENST00000343979.6	3601	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	8.2192186706253	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTCATGGATTGTG	10	True	NA	3	True	AATAAA	-14	NA	12163095	12189871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12163207_12185784_12185912_12186113_12186175_12186569
transcript_94477.known	chr19	-	2636	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	0	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
transcript_94478.known	chr19	-	2699	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAAGACATA	0	True	NA	NA	False	AAAACA	-33	NA	12333633	12317476	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
transcript_94479.known	chr19	-	996	6	FSM	ENSG00000188033.10	ENST00000414906.5	996	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	7.83326241102646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATTCAGATATCTCAC	11	True	NA	NA	False	NA	NA	NA	12610803	12581306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12609869_12609975_12610563
transcript_94480.known	chr19	+	576	5	FSM	ENSG00000173875.14	ENST00000597691.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	32.7595405950694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGCCGGAGTAAAACC	-8	True	NA	NA	False	NA	NA	NA	12610919	12627805	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12611083_12612225_12612366_12623699_12623827_12624649_12624711_12627720
transcript_94481.known	chr19	-	6108	5	FSM	ENSG00000188033.10	ENST00000311437.11	6108	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	7.88986691902975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGAGTTTTTCAT	1	True	NA	0	True	ATTAAA	-23	NA	12610813	12576099	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12610563
transcript_94483.known	chr19	+	6465	4	FSM	ENSG00000173875.14	ENST00000343325.9	6465	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	6.68331255192114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATATGGGAGTTTGTT	-8	True	NA	NA	False	AGTAAA	-21	NA	12610919	12633834	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12611083_12623699_12623827_12624649_12624711_12627720
transcript_94487.known	chr19	-	2583	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-7	True	NA	-1	True	ATTAAA	-22	NA	12401271	12390015	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
transcript_94488.known	chr19	-	2573	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	2.16024689946929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTCTTCTGTTTAATG	0	True	NA	NA	False	ATTAAA	-22	NA	12441021	12429705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
transcript_94489.known	chr19	-	2885	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGCATTTCCATTTCT	-21	True	NA	NA	False	ATTAAA	-17	NA	12551482	12525372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
transcript_94490.known	chr19	+	294	2	FSM	ENSG00000173875.14	ENST00000498389.1	294	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGCTTCCTTCCTTTA	2	True	NA	NA	False	NA	NA	NA	12610957	12612394	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12611083_12612225
transcript_9450.known	chr1	+	5050	6	FSM	ENSG00000197587.11	ENST00000360032.4	5050	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.21110255092798	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCAGTCCATGTTCATT	0	True	NA	18	True	AATAAA	-19	NA	46489835	46516216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46489878_46490643_46490784_46506998_46507165_46510475_46510655_46510934_46511284_46512042
transcript_94501.known	chr19	-	3170	24	FSM	ENSG00000104774.13	ENST00000221363.8	3170	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	64.6461065542821	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGTCGCTCTGTGACTG	-7	True	NA	-22	True	ATTAAA	-16	NA	12666734	12646515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658508_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
transcript_94505.nnic	chr19	-	3109	23	NIC	ENSG00000104774.13	novel	3185	24	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	65.7064596746409	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGTCGCTCTGTGACTG	2629	False	NA	-22	True	ATTAAA	-16	NA	12666787	12646515	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658511_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
transcript_94533.known	chr19	+	1425	11	FSM	ENSG00000123154.12	ENST00000548381.5	1425	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	62.1147325519478	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCAGTCCTCGTTCT	-13	True	NA	14	True	AATAAA	-33	NA	12666813	12675831	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_94535.known	chr19	+	1480	10	FSM	ENSG00000123154.12	ENST00000546754.5	1480	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	65.4451046938964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATAGAAGAGGGGG	-25	True	NA	-26	True	AAAAAG	-25	NA	12666801	12675791	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12666993_12668507_12668628_12669754_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_94543.known	chr19	-	1172	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	128.243664560866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	689	False	NA	-28	True	NA	NA	NA	12681206	12675742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
transcript_94544.known	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	53.9801757592544	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	15	False	12681895	-2	True	NA	NA	NA	12681880	12675716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_9455.known	chr1	-	2719	14	FSM	ENSG00000079277.22	ENST00000371946.9	2719	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	52.8117119877487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	76	False	NA	-11	True	AATAAA	-13	NA	46604214	46557417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46571416_46571540_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_94550.known	chr19	-	1090	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	129.978020119887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	124	False	NA	-7	True	NA	NA	NA	12681771	12675721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_94552.known	chr19	-	1176	8	FSM	ENSG00000095059.17	ENST00000601537.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	128.969384122032	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGCTACGTCTCTAGAA	4	True	NA	-47	True	NA	NA	NA	12681860	12675761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676143_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_94565.nic	chr19	-	2403	7	NIC	ENSG00000095059.17	novel	1090	8	NA	NA	-19	0	intron_retention	FALSE	canonical	3	335	junction_6	38.7685439499603	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	-4	True	NA	-7	True	NA	NA	NA	12681899	12675721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_12675934_12676016_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_94578.known	chr19	-	676	2	FSM	ENSG00000095059.17	ENST00000593473.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCCTTGTGGCTGCA	11	True	NA	NA	False	GGGGCT	-17	NA	12681853	12679943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12680326_12681559
transcript_94580.known	chr19	-	1727	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	16.0030861221234	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	0	True	NA	-6	True	AATAAA	-22	NA	12696631	12688915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
transcript_9459.known	chr1	-	2686	13	FSM	ENSG00000079277.22	ENST00000650508.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41.8535807574719	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-4	True	NA	-1	True	AATAAA	-23	NA	46604294	46557407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_94591.nic	chr19	-	5074	26	NIC	ENSG00000105576.16	novel	5051	26	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_25	28.8076101056648	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	-27	True	NA	-10	True	AGTAAA	-18	NA	12723985	12699200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
transcript_94594.known	chr19	-	5051	26	FSM	ENSG00000105576.16	ENST00000425528.6	5051	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	31.3290663761307	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	26	True	NA	-10	True	AGTAAA	-18	NA	12723932	12699200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702178_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
transcript_94595.known	chr19	-	4962	25	FSM	ENSG00000105576.16	ENST00000356861.9	4962	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	28.2200861779139	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	-1	True	NA	-10	True	AGTAAA	-18	NA	12722355	12699200	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12722133
transcript_9460.nic	chr1	-	2606	13	NIC	ENSG00000079277.22	novel	2719	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	41.1105386596781	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	-15	True	NA	-11	True	AATAAA	-13	NA	46604266	46557417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_94605.known	chr19	-	547	3	FSM	ENSG00000105576.16	ENST00000590781.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	64.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGGTACGCCCTCTGCT	7777	False	NA	NA	False	NA	NA	NA	12723613	12719266	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12719337_12720878_12720991_12723248
transcript_94606.known	chr19	-	879	3	FSM	ENSG00000123144.11	ENST00000242784.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_2	570.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12	True	NA	-7	True	AGTAAA	-21	NA	12734684	12730639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12731069_12731343_12731422_12734312
transcript_94607.known	chr19	-	988	3	FSM	ENSG00000123144.11	ENST00000591254.1	988	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	15	True	NA	-7	True	AGTAAA	-21	NA	12734657	12730639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12731069_12731343_12731558_12734312
transcript_9461.nic	chr1	-	2616	12	NIC	ENSG00000079277.22	novel	2661	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	43.4444644069104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-17	True	NA	-1	True	AATAAA	-23	NA	46604268	46557407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_94610.known	chr19	+	1368	8	FSM	ENSG00000198356.12	ENST00000591090.5	1368	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	449.247897568133	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	6114	False	NA	27	True	AATAAA	-16	NA	12737138	12748323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12737194_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_94611.known	chr19	+	1275	7	FSM	ENSG00000198356.12	ENST00000357332.8	1275	7	0	0	0	0	multi-exon	FALSE	canonical	1	456	junction_4	275.050096447094	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	2	True	NA	27	True	AATAAA	-16	NA	12737496	12748323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_94612.known	chr19	+	2011	10	FSM	ENSG00000039987.7	ENST00000553030.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	3.19722101554181	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGTCTGATTTCTC	-10	True	NA	9	True	AATAAA	-23	NA	12751790	12758458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12751840_12752541_12752745_12753259_12753355_12754551_12754786_12754876_12755032_12755378_12755457_12755614_12755768_12755854_12755936_12756140_12756296_12757650
transcript_94619.known	chr19	-	2547	23	FSM	ENSG00000095066.12	ENST00000678590.1	2547	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	170.041542080334	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGTGCTCTGGGCAC	20	True	NA	-27	True	AATAAA	-15	NA	12775523	12763002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765828_12765835_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774634_12774742_12774811_12774898_12775404
transcript_9462.known	chr1	-	1270	12	FSM	ENSG00000079277.22	ENST00000428112.7	1270	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	42.6034957631374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCTGATGGCCTCT	-4	True	NA	NA	False	NA	NA	NA	46604255	46558698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_94638.nnic	chr19	-	2754	22	NNC	ENSG00000095066.12	novel	2542	23	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	103.124212358704	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGTGCTCTGGGCAC	9149	False	NA	-27	True	AATAAA	-15	NA	12775584	12763002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775218
transcript_94639.known	chr19	-	2603	22	FSM	ENSG00000095066.12	ENST00000264827.9	2603	22	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_6	79.4863898274444	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGTGCTCTGGGCA	9113	False	NA	-28	True	AATAAA	-14	NA	12775620	12763003	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
transcript_9465.known	chr1	-	1557	11	FSM	ENSG00000079277.22	ENST00000528077.6	1557	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	53.2931515300043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTCCAAAGGGGTTG	-17	True	NA	NA	False	NA	NA	NA	46604268	46558392	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_94688.known	chr19	-	890	3	FSM	ENSG00000095066.12	ENST00000589134.5	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	23	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-1	True	NA	NA	False	AAAAAG	-29	NA	12775544	12774077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774742_12774811_12774898_12775404
transcript_94689.known	chr19	-	403	3	FSM	ENSG00000095066.12	ENST00000592512.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_2	303.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGAGTACTCACCCT	7847	False	NA	NA	False	NA	NA	NA	12778409	12774534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774742_12774811_12774898_12778299
transcript_9469.known	chr1	-	2815	4	FSM	ENSG00000142961.16	ENST00000319928.9	2738	4	-73	-4	-73	4	multi-exon	FALSE	canonical	3	9	junction_3	4.92160768674447	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGGAAGCGGTGATCT	NA	False	NA	NA	False	AATAAA	-20	NA	46616884	46607714	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46609685_46610001_46610205_46612903_46613372_46616710
transcript_94690.known	chr19	-	585	3	FSM	ENSG00000095066.12	ENST00000593143.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	313.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTCAGCAAGGAATAACA	16	True	NA	NA	False	NA	NA	NA	12792582	12774501	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774742_12774811_12774898_12792323
transcript_94692.known	chr19	-	1114	2	FSM	ENSG00000095066.12	ENST00000592808.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGGGAATAGCAGATGT	-29	True	NA	NA	False	NA	NA	NA	12775572	12773951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774898_12775404
transcript_94693.known	chr19	+	1830	1	FSM	ENSG00000171223.6	ENST00000302754.6	1830	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	773	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTGTCTTTTTTTCC	1	True	NA	18	True	AGTAAA	-23	NA	12791485	12793315	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12791500_12793300
transcript_94694.known	chr19	-	925	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	8033	junction_5	530.593629814758	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	0	True	NA	-9	True	AATAAA	-17	NA	12801800	12796822	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_94697.known	chr19	+	1164	8	FSM	ENSG00000104889.7	ENST00000221486.6	1164	8	0	0	0	0	multi-exon	TRUE	canonical	3	894	junction_6	37.7202376255852	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGGTTTGATTTTT	12	True	NA	24	True	AATAGA	-20	NA	12806583	12813640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_9470.known	chr1	-	5725	3	FSM	ENSG00000142961.16	ENST00000371940.1	5725	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGCCACTGGTGGGAA	382	False	NA	NA	False	AATAAA	-10	NA	46616465	46607724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46609685_46610001_46610205_46612903
transcript_94704.known	chr19	+	878	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_3	41.3843770844345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCACGGCTGTAA	51	False	NA	20	True	AATAAA	-35	NA	12806676	12807976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
transcript_94707.known	chr19	+	4853	26	FSM	ENSG00000105613.10	ENST00000251472.9	4853	26	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_14	13.9771241677249	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	18	True	NA	27	True	AATAAA	-20	NA	12838514	12874952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865315_12865482_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
transcript_9471.known	chr1	-	464	3	FSM	ENSG00000079277.22	ENST00000465783.6	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAAGCTGTATTCACTG	9971	False	NA	-12	True	AATAAA	-25	NA	46594280	46580433	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46580628_46583227_46583330_46594112
transcript_94712.nic	chr19	+	3090	8	ISM	ENSG00000105613.10	ENST00000251472.9	4853	26	28525	0	-1561	0	3prime_fragment	FALSE	canonical	3	34	junction_1	11.8545608204141	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	NA	False	NA	27	True	AATAAA	-20	NA	12867039	12874952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
transcript_94713.known	chr19	-	2076	7	FSM	ENSG00000132026.15	ENST00000589272.5	2076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.3209397188508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGAGTGTGGCTGCTTCTT	7	True	NA	-2	True	AATAAA	-20	NA	12835428	12825478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12826667_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_94715.known	chr19	-	1328	7	FSM	ENSG00000132026.15	ENST00000322912.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	10.3077640640442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	19	False	NA	-5	True	AATAAA	-17	NA	12835416	12825481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_94716.nic	chr19	-	1414	7	NIC	ENSG00000132026.15	novel	2076	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	10.5934990547138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGACGAGTGTGGCTGCT	7	True	NA	-6	True	AATAAA	-16	NA	12835428	12825482	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12829029_12829810_12829998_12834784_12834847_12835082
transcript_94718.known	chr19	-	1023	6	FSM	ENSG00000132026.15	ENST00000674343.2	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	6.58483105326173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-2	True	NA	-5	True	AATAAA	-17	NA	12834579	12825481	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834488
transcript_9472.known	chr1	-	594	5	FSM	ENSG00000079277.22	ENST00000486716.5	594	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	28.8389927008556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	10020	False	NA	2	True	AATAAA	-20	NA	46594231	46574825	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112
transcript_94722.known	chr19	+	739	3	FSM	ENSG00000267424.1	ENST00000588469.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGGAGGAGCGGCGA	NA	False	NA	-77	True	NA	NA	NA	12825710	12832983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12825913_12826784_12826893_12832554
transcript_94726.nnic	chr19	+	677	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	310	85	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCCTGGCCTGGCTCCT	288	False	NA	8	True	TATAAA	-5	NA	12826020	12833068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_94728.known	chr19	-	1938	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_2	27.1116211245289	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTTAACCTTCTCT	-5	True	NA	-4	True	AATAAA	-15	NA	12881449	12875208	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
transcript_94733.known	chr19	-	745	5	FSM	ENSG00000105612.9	ENST00000592506.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	102.49878048055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTGAACCAGATAGC	23	True	NA	NA	False	NA	NA	NA	12881466	12876253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12876364_12878381_12878580_12880801_12880881_12880971_12881153_12881289
transcript_94740.nic	chr19	-	1643	2	ISM	ENSG00000105610.6	ENST00000264834.6	1613	3	881	0	881	0	3prime_fragment	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCGTTGGCCTGAAT	878	False	NA	NA	False	TATAAA	-20	NA	12886320	12884421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_12885061_12885316
transcript_94741.known	chr19	-	1613	3	FSM	ENSG00000105610.6	ENST00000264834.6	1613	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCGTTGGCCTGAAT	-3	True	NA	NA	False	TATAAA	-20	NA	12887201	12884421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12885061_12885316_12886143_12887053
transcript_94742.known	chr19	-	1248	6	FSM	ENSG00000161860.8	ENST00000293695.8	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	1.93907194296653	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGATAGGGTCTCACT	-14	True	NA	NA	False	NA	NA	NA	12919293	12898785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12899386_12900003_12900121_12900459_12900649_12904491_12904667_12918221_12918338_12919242
transcript_94745.known	chr19	+	1852	12	FSM	ENSG00000105607.13	ENST00000222214.10	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	69.7486633066029	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGAGAAGTAGTTTCA	-10	True	NA	36	True	NA	NA	NA	12891159	12899999	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_94746.known	chr19	+	1867	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	46.2783966878715	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	-10	True	NA	-17	True	NA	NA	NA	12891159	12899946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_94766.known	chr19	-	1811	13	FSM	ENSG00000179115.11	ENST00000314606.9	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_4	56.176000708092	7964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGCTTTCCTTAGGG	3	True	NA	-19	True	AATAAA	-18	NA	12933711	12922478	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_94769.known	chr19	-	1707	13	FSM	ENSG00000179115.11	ENST00000586146.5	1707	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	302.175675541379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGACCTGTGGGCCACC	9922	False	NA	-70	True	NA	NA	NA	12933696	12922529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928572_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_9477.nic	chr1	-	2073	10	NIC	ENSG00000123472.12	novel	4158	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	269.327466016033	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTTGTGTATGTACC	1	True	NA	0	True	AATAAA	-26	NA	46668437	46632736	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_46633829_46635896_46635971_46643193_46643302_46645160_46645257_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_94781.known	chr19	-	1720	12	FSM	ENSG00000179115.11	ENST00000423140.6	1720	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	314.153486727651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTGGCTTTCCTTAGG	0	True	NA	-20	True	AATAAA	-17	NA	12933714	12922479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_94791.known	chr19	-	1831	12	FSM	ENSG00000179115.11	ENST00000588965.5	1831	12	0	0	0	0	multi-exon	FALSE	canonical	3	1021	junction_8	52.0357474075703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGCCCTGAGGAGACCT	9922	False	NA	-80	True	NA	NA	NA	12933696	12922539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_9481.known	chr1	-	1760	9	FSM	ENSG00000123472.12	ENST00000574428.5	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_4	96.2593339629981	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATCCTGGTTTGCATG	-17	True	NA	-7	True	AATAAA	-19	NA	46668364	46635044	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46635971_46643193_46643302_46645160_46645257_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_94827.known	chr19	+	1901	9	FSM	ENSG00000179218.15	ENST00000316448.10	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	2624	junction_3	208.782183147892	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	0	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_94828.known	chr19	+	1661	8	FSM	ENSG00000179218.15	ENST00000588454.6	1661	8	0	0	0	0	multi-exon	FALSE	canonical	2	119	junction_2	1037.41139774116	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	36	False	NA	25	True	ATTAAA	-17	NA	12938644	12944489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12938771_12939133_12939236_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_94832.known	chr19	+	1772	9	FSM	ENSG00000179262.10	ENST00000586534.6	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_6	256.153762416249	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATGGTCTGTGCCTGC	-5	True	NA	26	True	AATAAA	-14	NA	12945861	12953642	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
transcript_94835.known	chr19	+	1691	9	FSM	ENSG00000179262.10	ENST00000593114.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	435.361326227997	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGTGAATAAAGTTT	27	False	NA	-3	True	GATAAA	-3	NA	12945893	12953613	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948513_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_94852.known	chr19	+	1350	8	FSM	ENSG00000179262.10	ENST00000591499.5	1350	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	492.148558955152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCTCAGAGAAGCTG	-12	True	NA	NA	False	NA	NA	NA	12945854	12953269	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
transcript_9487.known	chr1	-	1241	7	FSM	ENSG00000123472.12	ENST00000329231.8	1241	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	315.984528453882	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCATCTTTATGAACTCA	9250	False	NA	NA	False	NA	NA	NA	46668427	46635422	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46635971_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_94875.known	chr19	-	1769	2	FSM	ENSG00000179271.3	ENST00000316939.3	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_1	0	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTATAAAACTT	-5	True	NA	NA	False	AATAAA	-17	NA	12957223	12953118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12954527_12956862
transcript_94877.known	chr19	-	1481	4	FSM	ENSG00000104903.5	ENST00000264824.5	1481	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTGGTGCCTCATTTT	2	True	NA	-3	True	NA	NA	NA	13102858	13099032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13099735_13100656_13100749_13100836_13101196_13102530
transcript_94879.nic	chr19	-	2046	17	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_16	102.605109978743	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-11	True	NA	-11	True	AATAAA	-20	NA	13116749	13104906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_94884.known	chr19	-	2127	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_15	104.989438622283	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-2	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_94895.nic	chr19	+	4620	7	NIC	ENSG00000160877.6	novel	717	3	NA	NA	-75	0	intron_retention	FALSE	canonical	3	6	junction_1	70.636196260998	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGCATGCTCGTTACT	NA	False	NA	16	True	AATAAA	-21	NA	13116786	13141147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13116936_13117993_13118132_13135199_13136154_13136231_13136406_13137270_13137377_13137477_13137576_13138146
transcript_94896.known	chr19	+	4524	6	FSM	ENSG00000160877.6	ENST00000292431.5	4524	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.0599003319509	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGCATGCTCGTTACT	-3	True	NA	16	True	AATAAA	-21	NA	13118263	13141147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13118455_13135199_13136154_13136231_13136406_13137270_13137377_13137477_13137576_13138146
transcript_94897.known	chr19	-	2179	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	103.953408912309	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	81	False	NA	-11	True	AATAAA	-20	NA	13116657	13104906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_94898.known	chr19	-	2263	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_8	53.0821585427303	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTGTGGTTTGTGTAT	89	False	NA	-6	True	AATAAA	-25	NA	13116649	13104901	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_94899.known	chr19	-	2251	15	FSM	ENSG00000104907.13	ENST00000588511.5	2251	15	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_10	106.148553010027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACCAATAAAGAGATGT	13	True	NA	-43	True	GGGGCT	-21	NA	13116725	13104938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116432_13116652
transcript_9490.known	chr1	-	535	6	FSM	ENSG00000123472.12	ENST00000474020.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	91.0757926125268	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTTAATAAAGATGC	9568	False	NA	NA	False	AATAAA	-41	NA	46668109	46652420	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_94906.known	chr19	-	1304	8	FSM	ENSG00000104915.15	ENST00000587230.6	1304	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	153.332904465535	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-4	True	NA	-1	True	AATAAA	-23	NA	13150375	13144057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_94909.known	chr19	-	1128	7	FSM	ENSG00000104915.15	ENST00000343587.9	1128	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	191.633910244392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	4658	False	NA	-1	True	AATAAA	-23	NA	13150346	13144057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145386_13149572_13149594_13149727_13149898_13150138
transcript_94911.nic	chr19	-	2251	7	ISM	ENSG00000104915.15	ENST00000587230.6	1304	8	-710	4	-702	0	intron_retention	FALSE	canonical	0	0	junction_6	161.099003376461	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	12	True	NA	-5	True	AATAAA	-19	NA	13151085	13144061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
transcript_94917.known	chr19	-	940	7	FSM	ENSG00000104915.15	ENST00000440593.3	940	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	162.644465698106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGCCGACAGTGGTGTG	4663	False	NA	NA	False	NA	NA	NA	13150341	13144488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149605_13149727_13149898_13150138
transcript_94918.known	chr19	-	713	7	FSM	ENSG00000104915.15	ENST00000593126.5	713	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	202.111905196656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTCCCCTAGAGCCAG	5165	False	NA	NA	False	NA	NA	NA	13149839	13144270	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144404_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
transcript_94919.known	chr19	-	1073	6	FSM	ENSG00000104915.15	ENST00000591843.1	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	169.667203666472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	15	True	NA	-1	True	AATAAA	-23	NA	13150287	13144057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149712_13149898_13150138
transcript_9492.known	chr1	-	869	2	FSM	ENSG00000123472.12	ENST00000460928.1	869	2	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGAAGTGTTAAGGCTA	9575	False	NA	NA	False	AGTAAA	-45	NA	46668102	46664541	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46665365_46668056
transcript_94921.nic	chr19	-	1631	6	ISM	ENSG00000104915.15	ENST00000589083.5	1241	7	-149	0	0	0	intron_retention	FALSE	canonical	0	0	junction_5	174.30387259037	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-4	True	NA	-5	True	AATAAA	-19	NA	13150375	13144061	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
transcript_94927.known	chr19	+	1291	2	FSM	ENSG00000160888.7	ENST00000587885.1	1291	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTACTGTGGGCTGTGCT	-40	True	NA	NA	False	TTTAAA	-25	NA	13150414	13154249	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13150553_13153096
transcript_94928.known	chr19	+	2110	2	FSM	ENSG00000160888.7	ENST00000292433.4	2110	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGGTTTTCTGC	-44	True	NA	7	True	AATAAA	-22	NA	13150410	13154911	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13150553_13152943
transcript_94929.known	chr19	+	2934	1	FSM	ENSG00000160888.7	ENST00000588173.1	2934	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5685	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTCTGGTTTTC	1445	False	NA	4	True	AATAAA	-19	NA	13151974	13154908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13152000_13154900
transcript_94932.known	chr19	-	2548	3	FSM	ENSG00000141837.22	ENST00000635988.1	2548	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGGGAGGTGGAGGTT	949	False	NA	NA	False	NA	NA	NA	13226555	13213782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13214334_13214500_13214609_13224666
transcript_94940.known	chr19	+	1922	11	FSM	ENSG00000104957.14	ENST00000586600.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	37.6644394621771	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTGTTAGATGGAC	-7	True	NA	21	True	ATTAAA	-21	NA	13731759	13763296	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_94943.nnic	chr19	+	2059	11	NNC	ENSG00000104957.14	novel	1922	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	39.0486875579705	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-21	True	NA	14	True	ATTAAA	-14	NA	13731745	13763289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_13732081_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_94947.nic	chr19	+	2043	11	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	38.8470076067643	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-17	True	NA	14	True	ATTAAA	-14	NA	13731749	13763289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13732069_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_94953.nic	chr19	+	2030	10	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	-26	0	intron_retention	FALSE	canonical	3	13	junction_1	38.9627869310205	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	1570	False	NA	14	True	ATTAAA	-14	NA	13731733	13763289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_94956.nnic	chr19	+	2148	10	NNC	ENSG00000104957.14	novel	1922	11	NA	NA	-14	0	intron_retention	FALSE	canonical	3	6	junction_1	40.4941696763593	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-21	True	NA	14	True	ATTAAA	-14	NA	13731745	13763289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_13732081_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_94958.nic	chr19	+	2132	10	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	7	junction_1	40.2716087229676	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-17	True	NA	14	True	ATTAAA	-14	NA	13731749	13763289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13732069_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_94965.known	chr19	+	1673	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	20.2325980707214	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-19	True	NA	14	True	ATTAAA	-14	NA	13747894	13763289	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_94966.known	chr19	+	1783	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.1373130916139	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	7	True	NA	4	True	ATTAAA	-4	NA	13747863	13763279	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_94967.known	chr19	+	617	2	FSM	ENSG00000104957.14	ENST00000587098.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTTTTTTTTT	-5	True	NA	NA	False	AAAAAG	-8	NA	13731761	13732602	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13731951_13732174
transcript_9497.known	chr1	-	5817	11	FSM	ENSG00000159658.15	ENST00000371933.8	5817	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	51.4553204246169	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGACTAAAGCCTCT	-1	True	NA	0	True	AATAAA	-22	NA	46719114	46675158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_94981.nnic	chr19	+	2011	7	NNC	ENSG00000037757.14	novel	3178	6	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	18.4992492340155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	-27	True	NA	23	True	AATAAA	-20	NA	13764509	13774282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_13764721_13764870_13765110_13765953_13766130_13768560_13768738_13768823_13769049_13772120_13772646_13773824
transcript_94991.known	chr19	+	3178	6	FSM	ENSG00000037757.14	ENST00000040663.8	3178	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	7.61577310586391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	-15	True	NA	23	True	AATAAA	-20	NA	13764521	13774282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13764721_13764870_13765110_13765953_13766130_13768560_13768738_13768823_13769049_13772120
transcript_95000.known	chr19	+	897	3	FSM	ENSG00000104979.9	ENST00000588234.6	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	2379	junction_1	63	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGGTACTACCTGGTT	-3	True	NA	NA	False	ATTAAA	-19	NA	13774455	13778773	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13774575_13774651_13774708_13778051
transcript_95001.known	chr19	+	504	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTGCAGTCCTGTGT	20	True	NA	14	True	AATAAA	-14	NA	13774478	13778459	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13774575_13778051
transcript_95002.known	chr19	+	491	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	-5	True	NA	17	True	AATAAA	-17	NA	13774823	13778462	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13774904_13778051
transcript_95003.nic	chr19	+	4736	14	FSM	ENSG00000132003.10	ENST00000590508.6	4731	14	-29	24	-29	0	multi-exon	FALSE	canonical	3	73	junction_7	14.4304083930612	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	119	True	NA	NA	NA	13795413	13832230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13795802_13799719_13799922_13804791_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13814514_13814866_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
transcript_95009.nic	chr19	+	3044	6	ISM	ENSG00000132003.10	ENST00000254323.6	4339	13	22050	0	-189	0	3prime_fragment	FALSE	canonical	3	98	junction_1	12.1095004025765	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	119	True	NA	NA	NA	13817509	13832230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
transcript_95011.nnic	chr19	+	2856	5	NIC	ENSG00000132003.10	novel	4339	13	NA	NA	-137	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	43.4935340021939	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	119	True	NA	NA	NA	13817561	13832230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13817977_13823345_13823501_13825549_13825714_13828644_13828727_13830190
transcript_95012.known	chr19	+	948	2	FSM	ENSG00000187556.8	ENST00000339133.6	948	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCCCTGGTCTTGGGA	2	True	NA	NA	False	AATAAA	-24	NA	13877133	13880757	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13877766_13880441
transcript_95013.known	chr19	+	3117	29	FSM	ENSG00000132024.18	ENST00000589606.5	3117	29	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_23	50.6534846797738	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCCCCGGAGCAGGGA	129	False	NA	NA	False	NA	NA	NA	13906441	13930659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928126_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
transcript_95022.nic	chr19	-	2891	9	FSM	ENSG00000132016.12	ENST00000586783.6	2885	9	-13	7	-13	0	multi-exon	FALSE	canonical	3	12	junction_2	6.77772085586298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGACCTGCTGTTTGGG	NA	False	NA	-6	True	AATAAA	-16	NA	13906130	13882354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13882953_13883307_13883401_13885960_13886056_13889187_13890463_13892785_13892891_13893141_13893224_13895371_13895547_13904861_13904914_13905714
transcript_95023.nic	chr19	-	2582	9	NIC	ENSG00000132016.12	novel	2489	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	9.13441295322255	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGACCTGCTGTTTGGG	NA	False	NA	-6	True	AATAAA	-16	NA	13906165	13882354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_13882953_13883307_13883401_13885960_13886056_13889187_13890463_13892785_13892891_13893141_13893224_13895371_13895547_13904861_13904914_13906058
transcript_95026.known	chr19	-	2489	8	FSM	ENSG00000132016.12	ENST00000346736.6	2489	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.2399776785471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGACCTGCTGTTTGGG	NA	False	NA	-6	True	AATAAA	-16	NA	13906165	13882354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13882953_13885960_13886056_13889187_13890463_13892785_13892891_13893141_13893224_13895371_13895547_13904861_13904914_13906058
transcript_95028.known	chr19	-	2454	8	ISM	ENSG00000132016.12	ENST00000586783.6	2885	9	1225	7	1215	0	3prime_fragment	FALSE	canonical	3	12	junction_2	7.22806322324201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGACCTGCTGTTTGGG	1204	False	NA	-6	True	AATAAA	-16	NA	13904892	13882354	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13882953_13883307_13883401_13885960_13886056_13889187_13890463_13892785_13892891_13893141_13893224_13895371_13895547_13904861
transcript_9503.known	chr1	-	5641	10	FSM	ENSG00000159658.15	ENST00000674435.1	5641	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	73.5030023742207	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATGTGTCTGACTAAA	-23	True	NA	-6	True	AATAAA	-16	NA	46719136	46675164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_95039.known	chr19	+	2278	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	303	junction_6	40.7338072803851	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	13	False	NA	16	True	AATAAA	-22	NA	13952491	13961449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
transcript_95049.nic	chr19	+	2379	12	NIC	ENSG00000132017.11	novel	2261	13	NA	NA	-45	0	intron_retention	FALSE	canonical	3	303	junction_6	41.0140068797305	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	NA	False	NA	16	True	AATAAA	-22	NA	13952463	13961449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960581_13960939
transcript_9507.nic	chr1	-	2138	8	ISM	ENSG00000159658.15	ENST00000484461.2	2573	9	-26	2642	-19	-2642	5prime_fragment	FALSE	canonical	3	190	junction_1	58.5330884968459	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAGCATAAAGGTAAAT	NA	False	NA	NA	False	AGTAAA	-3	NA	46719165	46686797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_9508.nic	chr1	-	1946	7	ISM	ENSG00000159658.15	ENST00000674435.1	5641	10	-29	11633	-19	-2642	5prime_fragment	FALSE	canonical	3	87	junction_1	87.3842090998139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAGCATAAAGGTAAAT	NA	False	NA	NA	False	AGTAAA	-3	NA	46719165	46686797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_46686871_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_9509.known	chr1	-	4120	4	FSM	ENSG00000159658.15	ENST00000674302.1	4120	4	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	25.9529488797623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATAAGGTGTAAGGAAG	-33	True	NA	NA	False	NA	NA	NA	46719146	46694068	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46696650_46707905_46708052_46716294_46716444_46717902
transcript_95105.known	chr19	-	4375	21	FSM	ENSG00000132005.9	ENST00000254325.9	4375	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	4.25294015946615	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	-19	True	NA	-6	True	AATAAA	-22	NA	14006320	13961529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537_13963747_13963857_13964008_13965448_13965547_13965625_13965778_13966420_13966531_13966632_13966752_13968564_13968681_13968774_13968895_13969993_13970176_13972742_13973128_13977991_13978087_13979446_13979543_13980572_13980690_13982120_13982229_13983186_13983271_13983485_13983596_13993524_13993896_14006102
transcript_9511.known	chr1	-	1724	3	FSM	ENSG00000159658.15	ENST00000674331.1	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	23	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATATGTGTAGAAAAG	452	False	NA	NA	False	NA	NA	NA	46718661	46707235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46708052_46716294_46716444_46717902
transcript_95112.nic	chr19	-	1837	4	ISM	ENSG00000132005.9	ENST00000254325.9	4375	21	42481	0	216	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0.471404520791032	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	6821	False	NA	-6	True	AATAAA	-22	NA	13963839	13961529	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537
transcript_9512.known	chr1	+	2256	12	FSM	ENSG00000186377.8	ENST00000371901.4	2256	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.43688521524088	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTATGGTATTCT	-12	True	NA	10	True	AATAAA	-19	NA	47023668	47050751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_47023995_47029989_47030132_47031435_47031481_47033240_47033369_47035805_47035934_47036016_47036172_47038659_47038767_47039341_47039533_47046466_47046601_47048564_47048630_47049421_47049505_47049999
transcript_95120.known	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_6	15.1071126318369	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	-23	True	NA	8	True	AATAAA	-21	NA	14031761	14053218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
transcript_9515.known	chr1	-	5019	17	FSM	ENSG00000123473.17	ENST00000371877.8	5019	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_3	23.0268186035327	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGTCTGTTATAGTT	-25	True	NA	-6	True	AATAAA	-22	NA	47314147	47250138	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
transcript_95153.known	chr19	-	2383	5	FSM	ENSG00000187867.10	ENST00000589048.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	4.7169905660283	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	4	True	NA	-24	True	AATAAA	-17	NA	14057599	14053366	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350
transcript_95157.known	chr19	-	746	4	FSM	ENSG00000105011.9	ENST00000590835.5	746	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	140.765368215655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCCCAGCACGCCG	NA	False	NA	NA	False	NA	NA	NA	14136613	14120447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14120666_14121531_14121678_14126121_14126238_14136347
transcript_95158.known	chr19	-	1689	4	FSM	ENSG00000105011.9	ENST00000263382.8	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	23.6126143312331	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTGTGCTTTTGTC	-3	True	NA	-4	True	ATTAAA	-39	NA	14136589	14119511	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14120666_14121531_14121709_14126121_14126238_14136347
transcript_95160.known	chr19	-	587	3	FSM	ENSG00000105011.9	ENST00000589468.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCTCCTCCCTGAGAA	-3	True	NA	NA	False	GGGGCT	-14	NA	14136589	14120497	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14120666_14121531_14121709_14136347
transcript_95161.known	chr19	-	765	3	FSM	ENSG00000105011.9	ENST00000474890.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	18.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATGAGCCAGA	12	False	NA	NA	False	NA	NA	NA	14136574	14121286	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14121709_14126121_14126238_14136347
transcript_95166.nic	chr19	-	4938	19	ISM	ENSG00000072071.17	ENST00000361434.8	7820	23	42761	2210	-1872	1216	3prime_fragment	FALSE	canonical	3	91	junction_18	28.3507571697612	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGACAAAAA	NA	False	NA	6	True	NA	NA	NA	14163408	14149952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_14151616_14152132_14152151_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605
transcript_9517.known	chr1	+	2937	6	FSM	ENSG00000162368.14	ENST00000371873.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_5	18.088670487352	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTTTAGATTTCTG	-8	True	NA	33	True	AATAAA	-23	NA	47333789	47378839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_47334117_47368468_47368616_47372954_47373108_47374908_47374986_47375196_47375294_47376703
transcript_95171.known	chr19	+	686	2	FSM	ENSG00000267169.2	ENST00000588658.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGGCTATATTTGCTG	15	True	NA	NA	False	NA	NA	NA	14137187	14155801	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14137224_14155151
transcript_95172.known	chr19	-	7853	24	FSM	ENSG00000072071.17	ENST00000340736.10	7853	24	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_20	48.2654521913583	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGAGTGGTGTGACTT	660	False	NA	-6	True	AATAAA	-21	NA	14206187	14147742	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14151616_14152132_14152151_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14167015_14167031_14170681_14170792_14177530_14177745_14183532_14183698_14205984
transcript_95173.known	chr19	+	3054	19	FSM	ENSG00000123146.20	ENST00000357355.7	3054	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.29793231940921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGCCTGCTGGTGGT	17	False	NA	14	True	ATTAAA	-18	NA	14381434	14408725	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14396341_14396474_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_95175.known	chr19	+	2751	18	FSM	ENSG00000123146.20	ENST00000358600.7	2751	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	3.69793732835334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAGTCCAGGACACCC	-14	True	NA	NA	False	NA	NA	NA	14381155	14408275	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_95187.known	chr19	-	1498	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_6	51.4800932400088	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTCATCTTGGCCT	7	True	NA	0	True	AATAAA	-37	NA	14419341	14408797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_95189.nic	chr19	-	2022	11	NIC	ENSG00000123136.15	novel	1498	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	42	junction_5	401.732298925541	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-11	True	NA	-21	True	AATAAA	-16	NA	14419359	14408818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14410335_14410420_14410606_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_9519.known	chr1	+	2648	1	FSM	ENSG00000186564.6	ENST00000334793.6	2648	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCACCAGCTCTGTCTG	-21	True	NA	NA	False	AATAAA	-16	NA	47438043	47440691	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_47438000_47440700
transcript_95191.nic	chr19	-	1887	11	NIC	ENSG00000123136.15	novel	1498	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	25	junction_5	405.175875392403	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-3	True	NA	-21	True	AATAAA	-16	NA	14419351	14408818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14410335_14410547_14410606_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_95202.nic	chr19	-	1890	10	NIC	ENSG00000123136.15	novel	1498	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	913	junction_5	54.2465792287836	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	NA	False	NA	-21	True	AATAAA	-16	NA	14419412	14408818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_9522.known	chr1	-	7524	7	FSM	ENSG00000269113.4	ENST00000606738.3	7524	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	8.61039423539299	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTAGTGTTTCTGTGTG	-16	True	NA	2	True	AATAAA	-18	NA	47997385	47760527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
transcript_95222.known	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	57.2407197718547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	11	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_95250.known	chr19	+	3120	22	FSM	ENSG00000123143.13	ENST00000242783.11	3120	22	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_9	92.5634427282457	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCATCCTCCGTGTCT	-28	True	NA	21	True	AAAAAG	-20	NA	14433305	14471859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14433543_14441142_14441444_14443469_14443622_14446425_14446562_14450317_14450464_14450895_14451110_14451828_14452024_14458030_14458141_14458231_14458376_14463666_14463743_14463827_14463970_14464059_14464154_14467564_14467642_14467717_14467794_14467875_14467968_14469340_14469518_14469751_14469815_14469911_14469989_14470162_14470306_14470574_14470683_14470770_14470852_14471580
transcript_95281.known	chr19	-	1921	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_8	197.919135949508	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-12	True	NA	-3	True	CATAAA	-17	NA	14496127	14477761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
transcript_95288.known	chr19	-	1386	8	FSM	ENSG00000123159.16	ENST00000586027.5	1386	8	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	164.972601312077	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-17	True	NA	NA	False	NA	NA	NA	14496132	14478245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
transcript_95294.known	chr19	-	1782	7	FSM	ENSG00000123159.16	ENST00000345425.6	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	296.040350102632	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-17	True	NA	-3	True	CATAAA	-17	NA	14496132	14477761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14496036
transcript_95295.known	chr19	-	1068	7	FSM	ENSG00000123159.16	ENST00000591349.5	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	305.601410700642	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-17	True	NA	NA	False	NA	NA	NA	14496132	14478245	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14496036
transcript_95300.known	chr19	-	1483	6	FSM	ENSG00000123159.16	ENST00000393028.5	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	322.474185013312	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGGCTTCGGGGTG	6	True	NA	-1	True	CATAAA	-19	NA	14496149	14477759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14496036
transcript_95305.known	chr19	+	1204	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	409.074590794067	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	-1	True	NA	2	True	AATAAA	-21	NA	14529593	14565980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_95306.known	chr19	+	1170	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	378.320658745109	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGGCTCTGTGTGTT	-3	True	NA	-1	True	AATAAA	-18	NA	14529591	14565977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_95310.known	chr19	+	1139	13	FSM	ENSG00000099797.15	ENST00000215567.10	1139	13	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_10	88.1097800095616	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	-1	True	NA	2	True	AATAAA	-21	NA	14529593	14565980	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_9532.known	chr1	+	3162	14	FSM	ENSG00000117834.13	ENST00000438567.7	3162	14	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	27.1644128492369	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTCTCCATGGTCCTGG	-9	True	NA	22	True	AATAAA	-16	NA	48222715	48248638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_48222899_48224723_48224796_48228849_48228955_48229294_48229460_48230599_48230706_48231544_48231626_48231945_48232152_48232366_48232503_48233654_48233763_48235728_48235880_48237678_48237848_48239321_48239538_48242456_48242617_48247334
transcript_95324.known	chr19	+	1164	12	FSM	ENSG00000099797.15	ENST00000597607.5	1164	12	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_9	92.0012576270492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGCTCTGTGTGTTT	31	False	NA	0	True	AATAAA	-19	NA	14529656	14565978	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_95347.known	chr19	-	2215	3	FSM	ENSG00000132002.9	ENST00000598235.2	2215	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	350.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAACCTCAGGGGAGC	4333	False	NA	-14	True	ATTAAA	-6	NA	14517835	14514781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14516171_14516465_14517047_14517590
transcript_95348.known	chr19	-	2242	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_1	20	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-4	True	NA	-1	True	ATTAAA	-19	NA	14518397	14514768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14516171_14516465_14517047_14518138
transcript_9535.known	chr1	-	5003	13	FSM	ENSG00000132122.12	ENST00000371847.8	5003	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.7704085029937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTTTGTTTATCCATT	-5	True	NA	NA	False	AATATA	-1	NA	48472204	48295372	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48298894_48305786_48305879_48355669_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_95355.known	chr19	-	535	3	FSM	ENSG00000099795.7	ENST00000215565.3	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	2383	junction_2	69.5	1344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-12	True	NA	-4	True	AATAAA	-19	NA	14572066	14566077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14566266_14566764_14566934_14571888
transcript_95359.known	chr19	+	4716	12	FSM	ENSG00000160961.12	ENST00000292530.11	4716	12	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_11	9.49467010119775	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGACATAGGTATTC	-24	True	NA	NA	False	AATAAA	-28	NA	14690047	14721899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14715381_14715471_14716111_14716239_14716993_14717090_14717656_14717734_14718227
transcript_9536.known	chr1	-	2297	13	FSM	ENSG00000132122.12	ENST00000371843.7	2297	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	17.7920081934434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAACCACAATGTGA	189	False	NA	NA	False	TTTAAA	-9	NA	48472010	48297836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48298894_48305786_48305879_48355717_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_95368.known	chr19	-	2420	10	FSM	ENSG00000105143.13	ENST00000594383.2	2420	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	28.6296056729333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTCTCTGTTTCTCT	-6	True	NA	NA	False	AATAAA	-20	NA	14979864	14950032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14950391_14952927_14953063_14954134_14954330_14956475_14956710_14962001_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
transcript_95369.nic	chr19	-	2175	10	NIC	ENSG00000105143.13	novel	2420	10	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	27.9183111732324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAAGGTCTCTGTTTCTC	2	True	NA	NA	False	AATAAA	-19	NA	14979824	14950033	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_14950391_14952927_14953063_14954134_14954330_14956475_14956710_14962001_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979512
transcript_95374.nic	chr19	-	2186	6	ISM	ENSG00000105143.13	ENST00000594383.2	2420	10	4	11277	4	0	5prime_fragment	FALSE	canonical	3	16	junction_5	22.8962879087419	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGAAATATCTCTACA	-2	True	NA	-16	True	AATAAA	-30	NA	14979860	14961309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
transcript_95375.known	chr19	-	2420	6	FSM	ENSG00000105143.13	ENST00000544886.6	2420	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	19.4072151531331	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGAAATATCTCTACA	NA	False	NA	-16	True	AATAAA	-30	NA	14980298	14961309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979512
transcript_95384.nic	chr19	-	2489	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_15	102.691901660582	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	1	True	NA	-13	True	AATAAA	-29	NA	15125694	15114986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
transcript_95385.known	chr19	-	2305	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_15	49.4913684954817	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-10	True	NA	-13	True	AATAAA	-29	NA	15125786	15114986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
transcript_95399.nic	chr19	-	2799	15	ISM	ENSG00000105135.16	ENST00000263383.8	2305	16	92	0	22	0	intron_retention	FALSE	canonical	3	409	junction_5	32.18608204723	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	1	True	NA	-13	True	AATAAA	-29	NA	15125694	15114986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924
transcript_9546.nic	chr1	-	766	7	ISM	ENSG00000132122.12	ENST00000371843.7	2297	13	-216	101746	-18	0	5prime_fragment	FALSE	canonical	3	47	junction_1	9.2736184954957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAGATCACAAAAGAAAA	-27	True	NA	-6	True	AAAACA	-5	NA	48472226	48399582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_95461.known	chr19	+	3252	8	FSM	ENSG00000105137.13	ENST00000342784.7	3252	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	16.2078338327804	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACTGAGTACTTGGG	-3	True	NA	14	True	AATAAA	-16	NA	15107400	15114974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
transcript_95463.known	chr19	+	3058	8	FSM	ENSG00000105137.13	ENST00000600440.5	3058	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	26.6159381436256	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGGGCCTACATGGGC	1	True	NA	25	True	AATAAA	-27	NA	15107404	15114985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_15107522_15109256_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
transcript_95469.nic	chr19	+	2050	7	ISM	ENSG00000105137.13	ENST00000342784.7	3252	8	-60	2250	-60	-898	5prime_fragment	FALSE	canonical	3	56	junction_1	14.2243921955679	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATCTGTCTGTTTTGTCT	40	False	NA	25	True	AGTAAA	-39	NA	15107340	15112724	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345
transcript_95478.nic	chr19	-	3046	12	ISM	ENSG00000074181.9	ENST00000601011.1	3858	23	-112	7981	-19	-6954	5prime_fragment	FALSE	canonical	3	250	junction_6	26.9640102959421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTCATGGAAGTTTGG	156	False	NA	NA	False	AAAAAG	-4	NA	15201014	15185891	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
transcript_9548.known	chr1	-	1693	6	FSM	ENSG00000162373.13	ENST00000371833.4	1693	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	18.7552659272003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTCTTTATCCTCATTT	0	True	NA	1	True	AATAAA	-23	NA	48776891	48727518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48776605
transcript_95480.nic	chr19	-	2576	12	ISM	ENSG00000074181.9	ENST00000601011.1	3858	23	-112	8451	-19	-7424	5prime_fragment	FALSE	canonical	3	250	junction_6	26.9640102959421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTCTGGAACATAGAT	156	False	NA	NA	False	AAAACA	-9	NA	15201014	15186361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
transcript_95484.known	chr19	-	8680	33	FSM	ENSG00000074181.9	ENST00000263388.7	8680	33	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_18	63.9750622801573	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGGGTTTCTGTTA	-1	True	NA	NA	False	AATAAA	-20	NA	15200995	15159037	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15161715_15162464_15162563_15165367_15165516_15165786_15166092_15167248_15167412_15170085_15170171_15170330_15170554_15170670_15170826_15174067_15174401_15177524_15178091_15178822_15178942_15179024_15179283_15179363_15179497_15180071_15180257_15180680_15180829_15180960_15181163_15181575_15181802_15184294_15184451_15184905_15185020_15185256_15185409_15185486_15185680_15186877_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
transcript_9549.known	chr1	-	1465	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	24.1412510032103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTCGTGTTTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	48776932	48727869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
transcript_95490.nic	chr19	-	1538	6	ISM	ENSG00000074181.9	ENST00000601011.1	3858	23	-112	13120	-19	-12093	5prime_fragment	FALSE	canonical	3	251	junction_2	32.8816058002039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGCTAGGCCGGGCAC	156	False	NA	NA	False	AATAAA	-6	NA	15201014	15191030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
transcript_95495.known	chr19	-	1805	9	FSM	ENSG00000105131.8	ENST00000602233.5	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	65.8003609412593	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCAGCTGTATTTCA	8	True	NA	-8	True	AATACA	-19	NA	15233435	15226924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232919_15233001_15233351
transcript_95506.nnic	chr19	-	1753	8	NIC	ENSG00000105131.8	novel	1805	9	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	64.1525605132653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTGTATTTCATTT	7157	False	NA	-5	True	AATACA	-22	NA	15233461	15226921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15233351
transcript_95507.nnic	chr19	-	1724	8	NNC	ENSG00000105131.8	novel	1771	8	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	62.7918492045792	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTGTATTTCATTT	7131	False	NA	-5	True	AATACA	-22	NA	15233487	15226921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15233406
transcript_95516.known	chr19	-	1838	7	FSM	ENSG00000105131.8	ENST00000221730.8	1838	7	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_6	16.0692943909253	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-29	True	NA	-2	True	AATACA	-25	NA	15232448	15226918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968
transcript_95517.known	chr19	-	1771	8	FSM	ENSG00000105131.8	ENST00000435261.5	1771	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	45.9809188463996	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTGTATTTCATTT	7571	False	NA	-5	True	AATACA	-22	NA	15233047	15226921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232919
transcript_95523.known	chr19	-	1821	9	FSM	ENSG00000141867.19	ENST00000594841.5	1821	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	435.092931883523	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAGAAAAATAATAGCAG	3	True	NA	4	True	AATAAA	-34	NA	15331906	15256098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15331835
transcript_95551.known	chr19	-	2388	16	FSM	ENSG00000011243.19	ENST00000680642.1	2388	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_8	325.836496148332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15399831_15399985_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95552.known	chr19	-	2113	16	FSM	ENSG00000011243.19	ENST00000609519.5	2113	16	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_6	259.683311404915	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	18	True	NA	-4	True	AATAAA	-15	NA	15418988	15380049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95560.known	chr19	-	3715	15	FSM	ENSG00000105127.10	ENST00000598597.7	3715	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	76.430340433466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTCTGGGTCATTTC	-4	True	NA	1	True	AATAAA	-17	NA	15379815	15353520	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_95571.known	chr19	-	2172	15	FSM	ENSG00000011243.19	ENST00000680303.1	2172	15	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_6	268.351239525928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398704_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95573.known	chr19	-	2200	15	FSM	ENSG00000011243.19	ENST00000681459.1	2200	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	271.139818212686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398732_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95576.known	chr19	-	2235	15	FSM	ENSG00000011243.19	ENST00000680803.1	2235	15	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_6	254.781188633762	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95586.known	chr19	-	1946	15	FSM	ENSG00000011243.19	ENST00000681170.1	1946	15	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_11	227.723337335783	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-1	True	NA	-20	True	NA	NA	NA	15418969	15380065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403652_15403716_15404009_15404043_15410519_15410595_15418910
transcript_9559.known	chr1	+	1653	7	FSM	ENSG00000162374.18	ENST00000448907.7	1653	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.6718699236469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAATAATA	NA	False	NA	NA	False	AAGAAA	-4	NA	50048013	50201570	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_50048183_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_95601.known	chr19	-	4196	14	FSM	ENSG00000105127.10	ENST00000681018.1	4196	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	64.984203815713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	720	False	NA	NA	False	ATTAAA	-2	NA	15379109	15353399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15378488
transcript_95603.known	chr19	-	3667	14	FSM	ENSG00000105127.10	ENST00000681812.1	3667	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	64.9632577082693	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	-11	True	NA	NA	False	ATTAAA	-2	NA	15379787	15353399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368340_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_95607.known	chr19	-	2057	14	FSM	ENSG00000011243.19	ENST00000679638.1	2057	14	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_3	235.799282813048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	NA	False	NA	-4	True	AATAAA	-15	NA	15419044	15380049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397204_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_9561.known	chr1	+	3965	7	FSM	ENSG00000162374.18	ENST00000371824.7	3965	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.46707315561891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTTCCCAAATTTTTA	-15	True	NA	9	True	AATAAA	-20	NA	50108919	50203772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_50109199_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_95612.known	chr19	-	3119	14	FSM	ENSG00000011243.19	ENST00000680103.1	3119	14	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_6	264.396689592468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95616.known	chr19	-	2749	14	FSM	ENSG00000011243.19	ENST00000593845.5	2749	14	0	0	0	0	multi-exon	FALSE	canonical	1	138	junction_5	215.796035631063	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGGGTTTCTCTGTTA	18	True	NA	-5	True	AATAAA	-14	NA	15418988	15380050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_9562.known	chr1	+	2467	7	FSM	ENSG00000162374.18	ENST00000371819.1	2467	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.12310562561766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATTTTCCTTTTGATC	68	False	NA	NA	False	ATTAAA	-3	NA	50109705	50202294	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_50109965_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_95623.known	chr19	-	2078	14	FSM	ENSG00000011243.19	ENST00000397410.10	2078	14	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_11	158.275095694679	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	18	True	NA	-4	True	AATAAA	-15	NA	15418988	15380049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95624.known	chr19	-	1933	14	FSM	ENSG00000011243.19	ENST00000595465.6	1933	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	244.047478162822	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-20	True	NA	-4	True	AATAAA	-15	NA	15419026	15380049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95630.known	chr19	-	3009	14	FSM	ENSG00000011243.19	ENST00000679634.1	3009	14	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_5	222.215578467419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95634.known	chr19	-	3424	14	FSM	ENSG00000011243.19	ENST00000680865.1	3424	14	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_11	186.464902229116	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-20	True	NA	-40	True	NA	NA	NA	15419026	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95639.known	chr19	-	3609	13	FSM	ENSG00000105127.10	ENST00000680245.1	3609	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	64.8003343612773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	-9	True	NA	NA	False	ATTAAA	-2	NA	15379785	15353399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15379712
transcript_95652.known	chr19	-	3654	13	FSM	ENSG00000011243.19	ENST00000680774.1	3654	13	0	0	0	0	multi-exon	FALSE	canonical	1	138	junction_5	224.207245397844	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95654.known	chr19	-	2390	13	FSM	ENSG00000011243.19	ENST00000596213.6	2390	13	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_5	104.950649778307	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-16	True	NA	-20	True	NA	NA	NA	15419022	15380065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15404043_15410519_15410595_15418910
transcript_95655.known	chr19	-	3907	13	FSM	ENSG00000011243.19	ENST00000595879.6	3907	13	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_10	164.72595086655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAAGTTTTCCCATC	-1	True	NA	-27	True	NA	NA	NA	15418969	15380072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95656.known	chr19	-	2995	13	FSM	ENSG00000011243.19	ENST00000680703.1	2995	13	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_10	163.20530696709	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAAGTTTTCCCATC	NA	False	NA	-27	True	NA	NA	NA	15419044	15380072	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95661.known	chr19	-	3544	13	FSM	ENSG00000011243.19	ENST00000681744.1	3544	13	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_10	155.751136967493	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95663.known	chr19	-	4308	13	FSM	ENSG00000011243.19	ENST00000681405.1	4308	13	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_10	193.311421172044	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-20	True	NA	-40	True	NA	NA	NA	15419026	15380085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95680.nic	chr19	-	4470	12	NIC	ENSG00000011243.19	novel	2251	16	NA	NA	-6	0	intron_retention	FALSE	canonical	1	284	junction_9	160.216485774871	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	NA	False	NA	-4	True	AATAAA	-15	NA	15419050	15380049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_9569.known	chr1	+	2235	4	FSM	ENSG00000162374.18	ENST00000652693.1	2235	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.84754619472471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCTCCTCCAGGTT	131	False	NA	NA	False	AATAAA	-16	NA	50109065	50181300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_50109199_50144956_50145198_50177088_50177193_50179543
transcript_9570.known	chr1	-	6821	19	FSM	ENSG00000185104.21	ENST00000396153.7	6821	19	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_9	30.3795435559303	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTCTATAAACTCT	0	True	NA	NA	False	AATAAA	-17	NA	50960267	50437027	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_50441524_50475463_50475680_50490587_50490666_50491720_50491802_50535368_50535458_50539591_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50655441_50655529_50705785_50705892_50738862_50738955_50744683_50744776_50787999_50788206_50801630_50801678_50857928_50857998_50959766
transcript_95706.known	chr19	-	2251	16	FSM	ENSG00000011243.19	ENST00000594594.6	2251	16	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_12	286.246622493417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	NA	False	NA	-4	True	AATAAA	-15	NA	15419121	15380049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403652_15403716_15404009_15404043_15410519_15410595_15418910
transcript_9571.known	chr1	+	3074	3	FSM	ENSG00000123091.5	ENST00000242719.4	3074	3	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	40.5	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAAAGTTAGAGTTGAT	-18	True	NA	11	True	AATAAA	-20	NA	51236272	51273447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51236880_51269955_51270126_51271150
transcript_95710.known	chr19	-	1453	8	FSM	ENSG00000011243.19	ENST00000594893.5	1453	8	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_5	173.965396512276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTTTTTACGGCTCT	0	True	NA	NA	False	NA	NA	NA	15418968	15399934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95717.known	chr19	-	583	4	FSM	ENSG00000011243.19	ENST00000601147.2	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_1	244.821476908288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTGTGTCTCCTCTCA	18	True	NA	NA	False	NA	NA	NA	15418988	15403318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15403716_15404009_15404043_15410519_15410595_15418910
transcript_95722.known	chr19	-	5697	8	FSM	ENSG00000011451.21	ENST00000263381.12	5697	8	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_5	47.6278087178626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGCGTAGAAGTCGTAAT	-11	True	NA	NA	False	AAAAAG	-35	NA	15449951	15419977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15436805_15437130_15448102_15448368_15449797
transcript_95723.known	chr19	-	603	3	FSM	ENSG00000011451.21	ENST00000596159.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCCCTGGGCCGAGAGC	332	False	NA	NA	False	NA	NA	NA	15449608	15436933	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15437130_15448102_15448368_15449466
transcript_95728.known	chr19	-	3266	18	FSM	ENSG00000105122.13	ENST00000343625.12	3266	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.40439251603686	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTTTCTTTGCCCAC	-2	True	NA	0	True	AGTAAA	-19	NA	15464544	15451623	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15451939_15452044_15452109_15452657_15452816_15453106_15453498_15454148_15454268_15454360_15454563_15454656_15454894_15456103_15456249_15456501_15456647_15457291_15457835_15458327_15458427_15458528_15458656_15460202_15460259_15461059_15461122_15461217_15461297_15461470_15461608_15464030_15464378_15464504
transcript_9573.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000680483.1	2718	18	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_17	8.72136937281206	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	9	True	NA	1	True	NA	NA	NA	51330562	51287257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51330436
transcript_95731.known	chr19	+	2504	9	FSM	ENSG00000167460.17	ENST00000643494.1	2504	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1301.68044633658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACATTTTGGTCAAATA	10	True	NA	-26	True	NA	NA	NA	16076520	16102965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093039_16093133_16093535_16093599_16093683_16093754_16101263
transcript_95732.known	chr19	+	2491	9	FSM	ENSG00000167460.17	ENST00000586833.7	2491	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1285.68196276334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	-2	True	NA	21	True	AATAAA	-32	NA	16077015	16102946	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16077131_16080914_16081076_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_95738.known	chr19	+	2474	8	FSM	ENSG00000167460.17	ENST00000643579.2	2474	8	0	0	0	0	multi-exon	FALSE	canonical	3	2824	junction_5	126.550304590059	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	-16	True	NA	11	True	AATAAA	-16	NA	16076494	16103002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_95741.known	chr19	+	2359	8	FSM	ENSG00000167460.17	ENST00000344824.11	2359	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1041.33742497476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCCAGCCAACATGGCGA	378	False	NA	NA	False	NA	NA	NA	16079501	16102149	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16080443_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_95748.known	chr19	-	3103	1	FSM	ENSG00000279198.1	ENST00000624324.1	3103	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTATGGTGTTTTG	9050	False	NA	NA	False	AATAAA	-18	NA	16077395	16074292	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16074300_16077400
transcript_9575.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_17	9.96776812451429	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-3	True	NA	1	True	NA	NA	NA	51345116	51287257	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
transcript_95752.known	chr19	+	2567	8	FSM	ENSG00000167461.12	ENST00000300935.8	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_6	94.1605229468945	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTAATGTGTCTTTTG	-2	True	NA	20	True	NA	NA	NA	16111888	16134234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129553_16129605_16132211
transcript_95754.known	chr19	+	1315	8	FSM	ENSG00000167461.12	ENST00000586682.1	1315	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	373.299135945905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCAAGGGGACGCTGTG	6	True	NA	NA	False	NA	NA	NA	16111896	16133010	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129573_16129605_16132211
transcript_95758.known	chr19	+	1957	6	FSM	ENSG00000196684.12	ENST00000613986.4	1957	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	1.93907194296653	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTGCAGGGTCTCTCT	-25	True	NA	NA	False	AATAAA	-33	NA	16143684	16158575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16143775_16148723_16148876_16152551_16152642_16153042_16153209_16154398_16154492_16157209
transcript_95759.known	chr19	+	1754	4	FSM	ENSG00000167461.12	ENST00000589697.1	1754	4	0	0	0	0	multi-exon	FALSE	canonical	3	1057	junction_1	41.9867704031745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	24	False	NA	NA	False	NA	NA	NA	16111914	16126990	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469
transcript_9576.known	chr1	-	2722	18	FSM	ENSG00000085831.16	ENST00000439482.6	2722	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	13.1512363411596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATTTATGAAACATAAAA	-11	True	NA	-63	True	NA	NA	NA	51330550	51287346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309431_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51330436
transcript_95760.known	chr19	+	1463	4	FSM	ENSG00000105058.12	ENST00000263384.12	1463	4	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_2	53.7215040742532	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	-12	True	NA	43	True	AATAAA	-21	NA	16185409	16192046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16185517_16185623_16185766_16190519_16190574_16190886
transcript_95761.known	chr19	+	798	3	FSM	ENSG00000105058.12	ENST00000588367.5	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	564.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAACTATGCGGCCTT	1	True	NA	NA	False	NA	NA	NA	16185422	16191448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16185517_16185623_16185766_16190886
transcript_95762.known	chr19	+	401	3	FSM	ENSG00000105058.12	ENST00000587351.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCATAAATGTGTGCAG	33	False	NA	NA	False	GATAAA	-13	NA	16185454	16186649	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16185517_16185623_16185766_16186452
transcript_95763.known	chr19	+	2311	13	FSM	ENSG00000072958.9	ENST00000444449.6	2311	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	145.153056193186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCCTTCCTCTGATGCA	-4	True	NA	29	True	ATTAAA	-20	NA	16197933	16235345	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16210359_16210396_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_95765.known	chr19	+	12859	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_9	28.8610235037836	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCATTGTTTTCCTTT	-27	True	NA	NA	False	AATAAA	-23	NA	16197910	16245906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_95767.known	chr19	+	1578	11	FSM	ENSG00000072958.9	ENST00000429941.6	1578	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	121.541926922359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCATCTGCCACGAAGG	-27	True	NA	NA	False	AAAAAG	-33	NA	16197910	16234784	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16233492_16233619_16234198_16234275_16234412
transcript_95771.known	chr19	-	3216	24	FSM	ENSG00000127527.14	ENST00000455140.7	3216	24	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	59.9192272949337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-4	True	NA	-16	True	TATAAA	-42	NA	16471970	16355246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16355852_16361778_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_95773.known	chr19	-	2924	23	FSM	ENSG00000127527.14	ENST00000248070.10	2924	23	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	50.4208732848799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGGATGCTCTATCA	NA	False	NA	-21	True	AATAAA	-14	NA	16472085	16361580	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_95774.nnic	chr19	-	2916	22	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_1	34.0804037960599	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	1	True	NA	-16	True	TATAAA	-42	NA	16472009	16355246	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_16355852_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_95776.known	chr19	-	2666	22	FSM	ENSG00000127527.14	ENST00000535753.6	2666	22	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	39.8376524001206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCCGCAG	-10	True	NA	-37	True	AAGAAA	-15	NA	16471976	16361596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_95778.known	chr19	-	420	4	FSM	ENSG00000127527.14	ENST00000602151.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	23.4568161143456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTATTTTTCTT	67	False	NA	NA	False	TTTAAA	-42	NA	16471943	16440652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16440910_16441891_16441982_16442177_16442220_16471912
transcript_95779.known	chr19	-	3486	16	FSM	ENSG00000127527.14	ENST00000597937.5	3486	16	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_8	19.8523438302775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTGTTTCTATTT	16	True	NA	NA	False	AATACA	-15	NA	16471950	16400630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_95781.known	chr19	-	4075	17	FSM	ENSG00000085872.15	ENST00000546361.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	56.1120530724015	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCCCGCACATGTGT	2	True	NA	-23	True	AATAAA	-16	NA	16542437	16517893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_95782.known	chr19	-	4084	17	FSM	ENSG00000085872.15	ENST00000198939.6	4084	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	131.148234357158	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTCCCGCACATGT	24	True	NA	-25	True	AATAAA	-14	NA	16542415	16517895	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530914_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_95796.nic	chr19	+	2705	9	NIC	ENSG00000105072.9	novel	3346	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	5.04975246918104	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAAGTTTTGTGTTTCTG	-14	True	NA	15	True	AGTAAA	-32	NA	16496393	16518619	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16518001
transcript_95797.known	chr19	+	3346	9	FSM	ENSG00000105072.9	ENST00000221671.8	3346	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	6.6226410894748	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGTGTGCTGTGCCT	-14	True	NA	16	True	ATTAAA	-17	NA	16496393	16521352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16520093
transcript_95800.nic	chr19	-	1417	5	ISM	ENSG00000085872.15	ENST00000546361.7	4075	17	-70	14090	-70	0	5prime_fragment	FALSE	canonical	3	487	junction_1	46.7031851162209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAGAAAAAAAAAAC	23	False	NA	NA	False	NA	NA	NA	16542507	16531983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_95807.nnic	chr19	-	2404	7	NNC	ENSG00000127526.15	novel	5126	6	NA	NA	-12	-579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.7729668102455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTCCCACTGGTGATG	-28	True	NA	NA	False	AAAACA	-9	NA	16572427	16552337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_16553910_16555151_16555398_16566531_16566658_16568031_16568170_16571511_16571583_16571943_16572109_16572341
transcript_95808.known	chr19	-	5126	6	FSM	ENSG00000127526.15	ENST00000595753.6	5126	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	11.7029910706622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTGGTCCCGATTTG	-16	True	NA	-22	True	AATAAA	-18	NA	16572415	16549836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16553910_16555151_16555398_16566531_16566658_16568031_16568170_16571511_16571583_16571943
transcript_95814.known	chr19	-	3172	3	FSM	ENSG00000105085.11	ENST00000263390.8	3172	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	1.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACAAACCAGTCTGAG	-4	True	NA	NA	False	AATAAA	-17	NA	16628204	16574918	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16577683_16578334_16578410_16627871
transcript_95815.known	chr19	-	478	2	FSM	ENSG00000105085.11	ENST00000600060.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGGAGGACCAAGAGAGGC	50	False	NA	NA	False	NA	NA	NA	16628173	16578233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16578410_16627871
transcript_95816.known	chr19	+	2717	1	FSM	ENSG00000279529.1	ENST00000623966.1	2717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCAGCATTTCTT	75	False	NA	117	True	AATAAA	-14	NA	16572623	16575340	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16572600_16575300
transcript_95817.known	chr19	-	1360	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_1	43.4453679924569	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-7	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_95818.known	chr19	-	1281	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	272.874513284037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGTGTGTGTGTTGTGT	7	True	NA	-20	True	AATAAA	-7	NA	16660130	16630750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_95819.known	chr19	-	1065	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	182.192206199936	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-7	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_95820.known	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	243.968619908381	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-7	True	NA	-41	True	NA	NA	NA	16660144	16646587	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_95821.known	chr19	-	850	5	FSM	ENSG00000214046.9	ENST00000358726.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	236.912826795005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCCTGCCTATAGTTC	-5	True	NA	NA	False	AATAAA	-18	NA	16660142	16652355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_95822.known	chr19	+	2631	6	FSM	ENSG00000072954.7	ENST00000187762.7	2631	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	18.0377382174152	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATGGCTTGTCTGATT	-29	True	NA	15	True	AATAAA	-15	NA	16661138	16690023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16682509_16686287_16686406_16688143
transcript_95828.known	chr19	+	798	3	FSM	ENSG00000072954.7	ENST00000595452.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGCCAGTAGCACA	74	False	NA	NA	False	NA	NA	NA	16661241	16680937	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16661342_16679983_16680141_16680396
transcript_95833.known	chr19	+	5129	20	FSM	ENSG00000127511.10	ENST00000379803.5	5129	20	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_10	115.241790857791	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGTGAGGGTGTGTTGG	0	True	NA	18	True	ATTAAA	-24	NA	16829406	16880353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16862883_16862980_16863679_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
transcript_95837.known	chr19	+	5038	19	FSM	ENSG00000127511.10	ENST00000248054.10	5038	19	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	100.388074152754	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCGTGAGGGTGTG	-9	True	NA	14	True	ATTAAA	-20	NA	16829397	16880349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16863679_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
transcript_95842.nic	chr19	+	6198	18	NIC	ENSG00000127511.10	novel	5038	19	NA	NA	-40	0	intron_retention	FALSE	canonical	3	157	junction_10	96.0920118453372	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCGTGAGGGTGTG	NA	False	NA	14	True	ATTAAA	-20	NA	16829357	16880349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
transcript_95857.known	chr19	+	2556	8	FSM	ENSG00000127511.10	ENST00000596802.5	2556	8	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_6	35.765106698329	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTCTAACCCTTGGGT	0	True	NA	NA	False	AAAACA	-15	NA	16829406	16855745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142
transcript_95864.nic	chr19	+	911	6	ISM	ENSG00000127511.10	ENST00000596802.5	2556	8	-49	4212	-40	-4212	5prime_fragment	FALSE	canonical	3	344	junction_1	28.7777691977679	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCTGTGAGCCACATGC	NA	False	NA	NA	False	NA	NA	NA	16829357	16851533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411
transcript_95866.nic	chr19	-	2795	19	ISM	ENSG00000160111.15	ENST00000443236.7	5983	42	-45	64596	-40	0	5prime_fragment	FALSE	canonical	2	24	junction_15	8.92717449389472	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAACTTGACTCCACCTA	9176	False	NA	-6	True	ATTAAA	-21	NA	17026855	16957546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_16957916_16970890_16971034_16975096_16975259_16976001_16976152_16977367_16977541_16980496_16980687_16989642_16989772_16993415_16993587_16997110_16997339_17000413_17000523_17002265_17002351_17004272_17004387_17008504_17008560_17009302_17009321_17011463_17011517_17011591_17011758_17020330_17020354_17022029_17022182_17026550
transcript_95871.known	chr19	-	1173	4	FSM	ENSG00000160111.15	ENST00000597335.5	1173	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	9.46337971105226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACCGTGAGTTCCTGA	NA	False	NA	NA	False	GGGGCT	-17	NA	16896973	16893738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16894438_16896175_16896327_16896455_16896666_16896860
transcript_95872.known	chr19	-	1593	3	FSM	ENSG00000160111.15	ENST00000594249.6	1593	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACAACCACATGCAGT	NA	False	NA	NA	False	NA	NA	NA	16896973	16893108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16894438_16896175_16896327_16896860
transcript_95873.known	chr19	-	582	3	FSM	ENSG00000160111.15	ENST00000596572.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTCAGAGGCTCAGAGT	-2	True	NA	NA	False	NA	NA	NA	16896944	16896038	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16896327_16896455_16896666_16896860
transcript_95875.known	chr19	-	1545	11	FSM	ENSG00000131351.15	ENST00000448593.6	1545	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	57.3515474943789	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	4852	False	NA	-30	True	AGTAAA	-18	NA	17075625	17049760	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060090_17062697_17062780_17069030_17069087_17073273_17073336_17075393
transcript_95884.known	chr19	+	7595	40	FSM	ENSG00000099331.14	ENST00000594824.5	7595	40	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_39	34.9496867634779	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	-12	True	NA	10	True	AATAAA	-12	NA	17075785	17213284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211775_17211894
transcript_95891.nic	chr19	+	4455	25	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-15	12948	-15	-5795	5prime_fragment	FALSE	canonical	3	159	junction_15	19.2634783261544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCTGGAGGGCGCAGA	21	False	NA	NA	False	CATAAA	-16	NA	17075761	17200338	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292
transcript_95896.nic	chr19	+	2635	17	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-15	28331	-15	0	5prime_fragment	FALSE	canonical	3	159	junction_15	17.9474058013965	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCACCAAGCATCAGC	21	False	NA	NA	False	NA	NA	NA	17075761	17184955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864
transcript_95897.nic	chr19	+	2678	16	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-15	29284	-15	0	5prime_fragment	FALSE	canonical	3	159	junction_15	18.1210742875066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTCGTGTTGAGATGA	21	False	NA	NA	False	AAGAAA	-7	NA	17075761	17184002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828
transcript_95900.nic	chr19	+	3085	15	NIC	ENSG00000099331.14	novel	7606	40	NA	NA	-15	-5511	combination_of_known_junctions	FALSE	canonical	3	37	junction_14	41.2023998706634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGAAAAACCAGATCCTC	21	False	NA	NA	False	AATAAA	-40	NA	17075761	17178491	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796
transcript_95906.nic	chr19	+	2009	4	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-15	59740	-15	-30456	5prime_fragment	FALSE	canonical	3	171	junction_3	12.0277457017791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTGGGCATGGTGACAC	21	False	NA	NA	False	AAAAAG	-17	NA	17075761	17153546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643
transcript_95908.nic	chr19	+	1826	3	NIC	ENSG00000099331.14	novel	7606	40	NA	NA	-15	282	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	97	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCACAGTTAATACACAT	21	False	NA	NA	False	NA	NA	NA	17075761	17104071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17075875_17101659_17102558_17103256
transcript_95911.nic	chr19	+	1204	2	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-15	110536	-15	-1039	5prime_fragment	FALSE	canonical	3	200	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCAGGCAGGCATA	21	False	NA	NA	False	NA	NA	NA	17075761	17102750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659
transcript_95914.known	chr19	+	7623	40	FSM	ENSG00000099331.14	ENST00000595618.5	7623	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	47.8205609403759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACGCCTGCTCATATGG	-17	True	NA	21	True	AATAAA	-23	NA	17075780	17213295	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210849_17211646_17211787_17211894
transcript_95915.known	chr19	+	587	7	FSM	ENSG00000053501.14	ENST00000593597.1	587	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	38.8647941229877	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACTGAAAATGGCGGAC	-19	True	NA	NA	False	NA	NA	NA	17215719	17219640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_95923.known	chr19	+	1776	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	22.8623598956888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	17215387	17218826	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
transcript_95924.known	chr19	+	845	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0860649230787	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	6	True	NA	9	True	AATAAA	-16	NA	17215356	17219829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_95925.known	chr19	+	637	7	FSM	ENSG00000053501.14	ENST00000596136.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.1678966622189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	-5	True	NA	9	True	AATAAA	-16	NA	17215389	17219829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_95926.nnic	chr19	+	1258	6	NNC	ENSG00000099330.9	novel	1111	6	NA	NA	-32	0	intron_retention	FALSE	canonical	0	0	junction_5	51.1921869038626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTACTGAGTATAATTAC	NA	False	NA	4	True	AATAAA	-12	NA	17226180	17229213	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228694
transcript_95927.known	chr19	+	1111	6	FSM	ENSG00000099330.9	ENST00000215061.9	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	25.7837157911733	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	-9	True	NA	10	True	AATAAA	-18	NA	17226225	17229219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_95928.known	chr19	+	878	6	FSM	ENSG00000099330.9	ENST00000600232.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	44.3783731112352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	18	False	NA	10	True	AATAAA	-18	NA	17226252	17229219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17229008
transcript_95929.nic	chr19	+	1172	6	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19	junction_1	46.8486926178309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	NA	False	NA	6	True	AATAAA	-14	NA	17226197	17229215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17226354_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_95933.known	chr19	+	1201	5	FSM	ENSG00000099330.9	ENST00000594283.5	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	20.6397674405503	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTAGACACCTACTG	8	True	NA	-7	True	AATAAA	-1	NA	17226242	17229202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17228802
transcript_95945.nic	chr19	+	1607	4	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	122	junction_1	12.9614813968157	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	-9	True	NA	6	True	AATAAA	-14	NA	17226225	17229215	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17227200_17227839_17228006_17228255_17228310_17228802
transcript_95949.known	chr19	+	842	3	FSM	ENSG00000099330.9	ENST00000596279.1	842	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGCCCACCACCGTGCC	111	False	NA	NA	False	NA	NA	NA	17226781	17228513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17227200_17227839_17228006_17228255
transcript_95952.known	chr19	+	421	3	FSM	ENSG00000099330.9	ENST00000599286.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGTATAATTACTTAAC	372	False	NA	9	True	AATAAA	-17	NA	17227042	17229218	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17227200_17228255_17228310_17229008
transcript_95953.known	chr19	+	730	2	FSM	ENSG00000099330.9	ENST00000595769.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGATGCATGGGGATGC	487	False	NA	NA	False	NA	NA	NA	17227157	17228943	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17227200_17228255
transcript_95959.known	chr19	-	3289	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	6.19755776271768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGACTGAAGCTGGA	10	True	NA	NA	False	AATAAA	-28	NA	17264745	17249170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
transcript_95972.known	chr19	-	2136	12	FSM	ENSG00000130307.12	ENST00000431146.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	10.6948663053474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATGTTGCATGATTTG	-1	True	NA	0	True	CATAAA	-19	NA	17264724	17250153	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264245_17264348_17264670
transcript_95982.known	chr19	-	3598	12	FSM	ENSG00000130307.12	ENST00000597928.5	3598	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	10.3755911909627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTCATGTTGCATGA	2039	False	NA	-4	True	CATAAA	-15	NA	17264714	17250157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258702_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17264151_17264245_17264348_17264670
transcript_9599.known	chr1	-	5163	25	FSM	ENSG00000085832.17	ENST00000371733.8	5163	25	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_16	25.1553161489884	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-8	True	NA	-9	True	AATAAA	-20	NA	51519266	51354262	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51448045_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_95992.known	chr19	+	1366	9	FSM	ENSG00000105393.16	ENST00000601043.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	364.346139508847	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	-5	True	NA	32	True	AATAAA	-18	NA	17267442	17279337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267517_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_95998.known	chr19	+	1472	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	302.187002326374	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	NA	False	NA	32	True	AATAAA	-18	NA	17267385	17279337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_96.known	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	5946	junction_1	21.5	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_1168_1532_1765_1902
transcript_96000.known	chr19	+	3081	9	FSM	ENSG00000160117.16	ENST00000651416.1	3081	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.9936060962725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGAACTCGCCCTGGA	19	True	NA	8	True	AATAAA	-16	NA	17281698	17287646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17281983_17282061_17282210_17282655_17282762_17282863_17283003_17283224_17283885_17284088_17284267_17285430_17285591_17285680_17285820_17286379
transcript_96001.known	chr19	+	2962	9	FSM	ENSG00000160117.16	ENST00000404085.7	2962	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	6.14410286372225	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGAACTCGCCCTGGA	6	True	NA	8	True	AATAAA	-16	NA	17281900	17287646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283963_17284088_17284267_17285430_17285591_17285680_17285820_17286379
transcript_96011.known	chr19	+	1821	8	FSM	ENSG00000160117.16	ENST00000404261.9	1821	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	9.85610760609162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGAGCGACAGCTTCAT	2	True	NA	NA	False	NA	NA	NA	17281644	17286505	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283885_17285430_17285591_17285680_17285820_17286379
transcript_96026.known	chr19	+	930	6	FSM	ENSG00000105393.16	ENST00000447614.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	461.648784250538	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCCTGTACATCTGCA	NA	False	NA	NA	False	NA	NA	NA	17267375	17279048	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_96027.known	chr19	+	966	6	FSM	ENSG00000105393.16	ENST00000595632.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	532.416603798191	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTCCTAGGAGGGAAAC	25	False	NA	NA	False	NA	NA	NA	17267501	17279172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_96037.known	chr19	-	2383	4	FSM	ENSG00000160113.6	ENST00000291442.4	2383	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_2	220.834779869476	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTTTATTTT	1	True	NA	-5	True	AATAAA	-20	NA	17245919	17231882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17232627_17235498_17236066_17240670_17240766_17244942
transcript_96040.known	chr19	-	487	3	FSM	ENSG00000130307.12	ENST00000596436.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTGGCACAATCTCGG	18	True	NA	NA	False	NA	NA	NA	17264737	17263832	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17264151_17264245_17264348_17264670
transcript_96041.nic	chr19	-	1472	2	ISM	ENSG00000160113.6	ENST00000291442.4	2383	4	9693	0	8278	0	3prime_fragment	FALSE	canonical	3	1088	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTTTATTTT	9694	False	NA	-5	True	AATAAA	-20	NA	17236226	17231882	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_17232627_17235498
transcript_96045.known	chr19	+	502	6	FSM	ENSG00000130311.11	ENST00000596582.1	502	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	235.954741423011	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTGAGAAGGGCCCCC	16	True	NA	90	True	NA	NA	NA	17309568	17320367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545_17319726_17320329
transcript_96051.known	chr19	+	4043	5	FSM	ENSG00000130311.11	ENST00000359866.9	4043	5	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	40.1932830209228	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCGCCTGTTCTGTGTGT	10	True	NA	6	True	AATAAA	-16	NA	17309562	17323298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545
transcript_96062.known	chr19	-	2042	5	FSM	ENSG00000127220.6	ENST00000247706.4	2042	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	11.2998893799895	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCGGACCTGTGCTGGG	-20	True	NA	-8	True	AATAAA	-18	NA	17303425	17292130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17292832_17294287_17294505_17294674_17294846_17300855_17301625_17303241
transcript_96066.nnic	chr19	+	2422	4	Antisense	novelGene_ENSG00000074855.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_3	2.16024689946929	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTGAGGAATGGTAAAAA	NA	False	NA	21	True	AATAAA	-21	NA	17328134	17332439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_17330007_17330926_17330992_17331114_17331432_17332271
transcript_96077.nnic	chr19	+	2545	3	Antisense	novelGene_ENSG00000074855.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_2	2.5	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTGAGGAATGGTAAAAA	NA	False	NA	21	True	AATAAA	-21	NA	17328134	17332439	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_17330007_17330926_17331432_17332271
transcript_9608.known	chr1	+	3660	24	FSM	ENSG00000117859.19	ENST00000428468.6	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	183.922766728274	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTGCAGTTTATTTAT	3	True	NA	6	True	CATAAA	-44	NA	51617091	51789219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_96086.nic	chr19	-	2817	2	NIC	ENSG00000074855.11	novel	1905	13	NA	NA	-28	1356	intron_retention	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGCGGTGGCTCACA	4	True	NA	NA	False	NA	NA	NA	17334883	17331931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_17333555_17333689
transcript_96087.known	chr19	+	764	2	FSM	ENSG00000130312.7	ENST00000252602.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATGTGTCATAACTCT	18	True	NA	19	True	AATAAA	-20	NA	17305871	17306843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17305958_17306165
transcript_96090.known	chr19	+	1894	9	FSM	ENSG00000130299.17	ENST00000361619.9	1894	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	95.215462898628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCGTAGTTTTTTAT	6744	False	NA	NA	False	NA	NA	NA	17334919	17341968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17335123_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
transcript_9610.known	chr1	+	3352	26	FSM	ENSG00000117859.19	ENST00000371714.5	3352	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	238.770403526065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	10	False	NA	20	True	CATAAA	-29	NA	51577178	51788469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51577257_51598123_51598194_51614304_51614420_51616873_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_96116.known	chr19	+	2566	9	FSM	ENSG00000130299.17	ENST00000324894.13	2566	9	0	0	0	0	multi-exon	FALSE	canonical	1	43	junction_4	68.8803310096576	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTCATTTCTTTTTA	-16	True	NA	36	True	TATAAA	-23	NA	17337552	17342731	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
transcript_96118.known	chr19	+	2493	9	FSM	ENSG00000130299.17	ENST00000600625.5	2493	9	0	0	0	0	multi-exon	FALSE	canonical	1	43	junction_4	84.0333825036217	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTACAAATTGTCATT	-14	True	NA	28	True	TATAAA	-15	NA	17337554	17342723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
transcript_96145.known	chr19	+	1951	8	FSM	ENSG00000130299.17	ENST00000358792.11	1951	8	0	0	0	0	multi-exon	FALSE	canonical	1	43	junction_4	73.2557722180669	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTGATCTAGAAGTGT	-14	True	NA	NA	False	NA	NA	NA	17337554	17342022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339267_17339433_17339600_17341043_17341323_17341477
transcript_9618.known	chr1	+	2210	21	FSM	ENSG00000117859.19	ENST00000531828.5	2210	21	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_6	117.471475261018	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAAGATGCAAAGTTTA	2652	False	NA	NA	False	NA	NA	NA	51729807	51787789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_96184.known	chr19	-	2290	6	FSM	ENSG00000130300.9	ENST00000252590.9	2290	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGACTCCAGAAGCGTGA	1	True	NA	NA	False	AATAAA	-16	NA	17377342	17351454	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17352369_17360527_17360610_17360771_17360833_17365285_17365999_17366098_17366196_17376919
transcript_96186.known	chr19	-	1001	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_2	51.9488931547151	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	1760	False	17405647	-9	True	AATAAA	-29	NA	17405630	17402938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
transcript_96187.known	chr19	-	879	4	FSM	ENSG00000130303.14	ENST00000527220.2	879	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	326.542833671514	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	21	True	NA	-9	True	AATAAA	-29	NA	17405575	17402938	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17405290
transcript_96196.known	chr19	+	1250	9	FSM	ENSG00000141971.13	ENST00000317040.12	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	35.0657863878739	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	-6	True	NA	19	True	AATAAA	-19	NA	17420046	17425332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_96198.nic	chr19	+	1106	8	NIC	ENSG00000141971.13	novel	1250	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_3	114.209617522755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	11	True	NA	19	True	AATAAA	-19	NA	17420063	17425332	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17420226_17420312_17420412_17420537_17420635_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_96201.known	chr19	+	563	5	FSM	ENSG00000282851.2	ENST00000634577.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.58602010819715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTTAACCCACTGCAGA	0	True	NA	NA	False	NA	NA	NA	17405823	17414468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17405996_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_96202.known	chr19	+	1269	4	FSM	ENSG00000282851.2	ENST00000635435.2	1269	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAAAACCCTGCCTGTAC	18	False	NA	NA	False	NA	NA	NA	17405762	17415005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17405988_17406076_17406297_17413096_17413306_17414390
transcript_96203.known	chr19	+	908	6	FSM	ENSG00000141971.13	ENST00000524382.1	908	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	21.2565284089383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTTCTCGCCCTCTGG	2180	False	NA	5	True	AATAAA	-5	NA	17422284	17425318	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_96204.known	chr19	-	2031	3	FSM	ENSG00000188051.7	ENST00000341130.6	2031	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTACTCAATGTT	3	True	NA	-10	True	AGTAAA	-16	NA	17448668	17435508	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17436928_17445198_17445285_17448142
transcript_96209.known	chr19	+	3514	12	FSM	ENSG00000130304.17	ENST00000252595.12	3514	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.5961427738235	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	15	True	NA	22	True	AATAAA	-14	NA	17470523	17506168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17470708_17486562_17486958_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17501272_17501420_17504454
transcript_96215.nic	chr19	+	3520	11	NIC	ENSG00000130304.17	novel	3514	12	NA	NA	-118	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	16.3306460374353	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	739	False	NA	22	True	AATAAA	-14	NA	17470370	17506168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17470708_17486562_17486958_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17504454
transcript_96220.nnic	chr19	+	3248	11	NIC	ENSG00000130304.17	novel	3514	12	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	20.4899975597851	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	6	True	NA	22	True	AATAAA	-14	NA	17470394	17506168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17470708_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17501272_17501420_17504454
transcript_9623.nic	chr1	+	2695	21	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	-1	-68	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	133.555456646294	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAGTTTAATTAATTA	2651	False	NA	12	True	ATTAAA	-16	NA	51729806	51788396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_96237.known	chr19	+	1008	5	FSM	ENSG00000130313.7	ENST00000252603.7	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	23.4240794909853	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	9	True	NA	25	True	ATTAAA	-17	NA	17511648	17521288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17511961_17516172_17516281_17517287_17517390_17517709_17517851_17520943
transcript_96238.known	chr19	+	651	5	FSM	ENSG00000130313.7	ENST00000600923.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.904735705901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTGTTCTGAAGGTAAC	30	True	NA	NA	False	NA	NA	NA	17511669	17517835	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17511961_17512944_17512969_17516172_17516281_17517287_17517390_17517709
transcript_9624.nic	chr1	+	2768	21	NIC	ENSG00000117859.19	novel	2721	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	133.555456646294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	2651	False	NA	20	True	CATAAA	-29	NA	51729806	51788469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_96242.known	chr19	+	1601	1	FSM	ENSG00000130313.7	ENST00000596799.1	1601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGGGTGCGGTGGCT	4	True	NA	NA	False	AATACA	-4	NA	17511643	17513244	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17511600_17513200
transcript_96246.known	chr19	+	3647	12	FSM	ENSG00000130309.12	ENST00000252599.9	3647	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	23.468635654936	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTTTGTGGGATTTTG	-17	True	NA	45	True	AATAAA	-20	NA	17555648	17583157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17555974_17559310_17559422_17560347_17560466_17567405_17567541_17568508_17568714_17572482_17572603_17577194_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698_17580906_17581176
transcript_9625.known	chr1	+	2755	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	110.341323882907	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	27	False	NA	20	True	CATAAA	-29	NA	51729903	51788469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_96251.nnic	chr19	+	2558	3	NNC	ENSG00000130309.12	novel	2941	2	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	135.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTTTGTGGGATTTTG	NA	False	NA	45	True	AATAAA	-20	NA	17579870	17583157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_17580241_17580698_17580906_17581176
transcript_96252.known	chr19	+	2941	2	FSM	ENSG00000130309.12	ENST00000593832.1	2941	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGGATTTTGCTCGG	NA	False	NA	50	True	AATAAA	-25	NA	17579950	17583162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17580906_17581176
transcript_96254.known	chr19	-	9985	44	FSM	ENSG00000130477.16	ENST00000519716.7	9985	44	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	18.8101154563964	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGACACGTGGTTGCC	-3	True	NA	-30	True	ATTAAA	-20	NA	17688354	17601335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17620692_17620723_17621831_17621871_17623541_17623548_17624828_17624953_17626632_17626786_17627508_17627598_17627862_17627941_17629239_17629324_17630144_17630289_17630653_17630751_17632781_17632909_17633107_17633194_17636023_17636158_17639082_17639218_17639435_17639526_17639839_17639909_17640510_17640662_17641392_17641557_17642844_17642961_17645673_17645844_17645969_17646112_17647264_17647493_17648430_17648651_17648911_17648984_17649338_17649345_17649508_17649588_17652630_17652678_17655273_17655383_17655882_17656399_17658061_17658270_17663531_17663568_17666649_17666705_17668116_17668191_17669552_17669677_17672377_17672496_17674656_17674757_17676011_17676042_17688177
transcript_9628.known	chr1	+	2721	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	128.759368860103	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	2659	False	NA	20	True	CATAAA	-29	NA	51729814	51788469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_96296.known	chr19	+	3288	7	FSM	ENSG00000130479.11	ENST00000324096.9	3288	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	270.85543499562	1154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCCTCTCTTCTTTC	-10	True	NA	28	True	AATAAA	-16	NA	17719479	17734513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17719621_17720935_17721038_17724125_17724209_17725048_17725190_17725828_17728173_17733192_17733429_17734272
transcript_9632.nic	chr1	+	460	3	ISM	ENSG00000117859.19	ENST00000481937.5	630	7	-66	9630	-17	-1659	5prime_fragment	FALSE	canonical	3	321	junction_1	98	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATGAACAGAGAAAGGT	2635	False	NA	NA	False	TTTAAA	-40	NA	51729790	51746739	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_51730125_51745535_51745632_51746709
transcript_96322.known	chr19	+	3214	29	FSM	ENSG00000130475.15	ENST00000594202.5	3214	29	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_28	79.4728165565344	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	7	True	NA	8	True	AATAAA	-33	NA	17747717	17788557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788269
transcript_96325.nic	chr19	+	3310	29	NIC	ENSG00000130475.15	novel	3214	29	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	1	9	junction_3	82.5546819399365	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	8	True	AATAAA	-33	NA	17747684	17788557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17747815_17754316_17754362_17754591_17754759_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_96328.nic	chr19	+	3338	29	NIC	ENSG00000130475.15	novel	3214	29	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.484654278496	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	8	True	AATAAA	-33	NA	17747684	17788557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17747815_17754316_17754467_17754591_17754682_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_96338.known	chr19	+	3094	28	FSM	ENSG00000130475.15	ENST00000600676.5	3094	28	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	83.0953639270738	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAAGTATCCTTTGCG	-11	True	NA	19	True	AATAAA	-44	NA	17747744	17788568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17747815_17754316_17754362_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_9634.known	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	306.10881790376	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-1	True	NA	-3	True	AATAAA	-45	NA	51878805	51789190	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
transcript_96375.known	chr19	+	694	4	FSM	ENSG00000130475.15	ENST00000600201.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	8.73053390247253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATCACCTCCTGTAGC	5	True	NA	NA	False	NA	NA	NA	17747760	17755622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121
transcript_96377.known	chr19	+	2692	3	FSM	ENSG00000179913.11	ENST00000318683.7	2692	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCACAGACAGATTCTT	-13	True	NA	NA	False	NA	NA	NA	17795137	17813576	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17795207_17807757_17808375_17811570
transcript_96378.known	chr19	-	5386	24	FSM	ENSG00000105639.20	ENST00000458235.7	5386	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.83308865536436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGCTGGACTTGGG	9	True	NA	-3	True	AATAAA	-17	NA	17847982	17824781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17826911_17830107_17830219_17830502_17830621_17831227_17831401_17831673_17831799_17832518_17832709_17832789_17832930_17834570_17834722_17834851_17835004_17835082_17835216_17835923_17836052_17837128_17837214_17837931_17838064_17838262_17838391_17839476_17839664_17840229_17840342_17841388_17841547_17841639_17841763_17842315_17842611_17843026_17843173_17843379_17843492_17843776_17843901_17844233_17844431_17847945
transcript_96381.nic	chr19	-	2525	3	ISM	ENSG00000105639.20	ENST00000527670.5	3996	23	13660	-1370	11738	0	3prime_fragment	FALSE	canonical	3	26	junction_2	3.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGCTGGACTTGGG	31	False	NA	-3	True	AATAAA	-17	NA	17830787	17824781	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_17826911_17830107_17830219_17830502
transcript_96382.known	chr19	+	634	5	FSM	ENSG00000105640.13	ENST00000222247.10	634	5	0	0	0	0	multi-exon	TRUE	canonical	3	16288	junction_1	2069.0013744558	6066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCATGTTTTCTTTGCAC	7	True	NA	17	True	AATAAA	-22	NA	17859909	17863319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17859975_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_96385.known	chr19	+	683	5	FSM	ENSG00000105640.13	ENST00000597648.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	8175.55193855436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	203	False	NA	-59	True	NA	NA	NA	17860124	17863243	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17860315_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_96397.known	chr19	+	987	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	403.92287320725	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	1	True	NA	24	True	AATAAA	-27	NA	17933014	17943985	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_96406.known	chr19	+	609	2	FSM	ENSG00000007080.11	ENST00000602080.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGGCTGGGCAGAGTG	9	True	NA	NA	False	NA	NA	NA	17933022	17936992	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17933049_17936409
transcript_96408.known	chr19	+	1055	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	815.362802683566	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGTGAGTGGGTGGGG	3	False	NA	30	True	AATAAA	-33	NA	17935095	17943991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_9641.known	chr1	-	3594	31	FSM	ENSG00000078618.23	ENST00000352171.12	3594	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	199.502773581388	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-1	True	NA	-22	True	AATAAA	-26	NA	51878727	51789209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_96411.known	chr19	+	3603	12	FSM	ENSG00000105642.16	ENST00000682733.1	3603	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.3826198026279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAGGACTCATCC	8	True	NA	18	True	AATAAA	-32	NA	17952257	18000085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17952339_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17982567_17982577_17985311_17985454_17988414_17988526_17989715_17989844_17993053_17993063_17993489_17993560_17998151
transcript_96417.known	chr19	+	3625	11	FSM	ENSG00000105642.16	ENST00000222249.13	3625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	17.4859943955155	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTTTGGCAGGACT	3	False	NA	13	True	AATAAA	-27	NA	17951292	18000080	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17951410_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989844_17993053_17993063_17993489_17993560_17998151
transcript_96419.nic	chr19	+	2245	11	NIC	ENSG00000105642.16	novel	3603	12	NA	NA	17	-1375	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	17.9510445378535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGCTGCCTGTGTGCAT	912	False	NA	13	True	AATAAA	-13	NA	17952201	17998705	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17952339_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17982567_17982577_17985311_17985454_17988414_17988526_17989715_17989819_17993489_17993560_17998151
transcript_96422.known	chr19	+	3563	11	FSM	ENSG00000105642.16	ENST00000683930.1	3563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.8383467053079	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAGGACTCATCC	26	True	NA	18	True	AATAAA	-32	NA	17967130	18000085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17982567_17982577_17985311_17985454_17988414_17988526_17989715_17989819_17993053_17993063_17993489_17993560_17998151
transcript_9643.nnic	chr1	-	3576	30	NIC	ENSG00000078618.23	novel	3594	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	261.849931152767	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-1	True	NA	-22	True	AATAAA	-26	NA	51878805	51789209	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_96430.known	chr19	+	3579	10	FSM	ENSG00000105642.16	ENST00000615435.2	3579	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	17.4292219498685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAGGACTCATCC	26	True	NA	18	True	AATAAA	-32	NA	17967130	18000085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17982567_17982577_17985311_17985454_17988414_17988526_17989715_17989844_17993489_17993560_17998151
transcript_96431.known	chr19	+	3603	10	FSM	ENSG00000105642.16	ENST00000684775.1	3603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	17.1147182345171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAGGACTCATCC	2	True	NA	18	True	AATAAA	-32	NA	17967106	18000085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989844_17993053_17993063_17993489_17993560_17998151
transcript_96434.nic	chr19	+	2266	9	ISM	ENSG00000105642.16	ENST00000682733.1	3603	12	-1	9567	-1	1993	5prime_fragment	FALSE	canonical	0	0	junction_5	17.9299853597263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	7	True	NA	NA	False	AAAAAG	-24	NA	17952256	17990518	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17952339_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17982567_17982577_17985311_17985454_17988414_17988526_17989715
transcript_96442.known	chr19	+	2528	8	FSM	ENSG00000105643.11	ENST00000379656.7	2528	8	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	9.19183310979738	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGCTTCTTGGTTTATT	-17	True	NA	9	True	AGTAAA	-16	NA	18001131	18014102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18001574_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
transcript_96443.known	chr19	+	2262	8	FSM	ENSG00000105643.11	ENST00000595712.6	2262	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.2770335831941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGAGAAAGAATCCGGG	5633	False	NA	-5	True	AGTAAA	-2	NA	18007181	18014088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18007372_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
transcript_96445.known	chr19	+	2501	8	FSM	ENSG00000105643.11	ENST00000222250.5	2501	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.2770335831941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGCTTCTTGGTTTATT	-4	True	NA	9	True	AGTAAA	-16	NA	18008169	18014102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18008585_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
transcript_96446.known	chr19	+	5896	27	FSM	ENSG00000099308.11	ENST00000262811.10	5896	27	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.89560897181558	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAACGTCTGGATTTGT	15	False	NA	30	True	AATAAA	-22	NA	18097792	18151692	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18097832_18107586_18107619_18121684_18121774_18121849_18121923_18122672_18122752_18123216_18123375_18123579_18123656_18123938_18124149_18124264_18124367_18124641_18124775_18128399_18128459_18128865_18128952_18130493_18130703_18131908_18132048_18134578_18134712_18134816_18134983_18135739_18135842_18137238_18137362_18139014_18139125_18141881_18142016_18143762_18144008_18144465_18144694_18145002_18145230_18145742_18145866_18146880_18147018_18147442_18147625_18149190
transcript_96453.known	chr19	+	3796	15	FSM	ENSG00000105647.19	ENST00000617130.5	3796	15	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_10	255.443362067778	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGATTCTGTTGTCAG	-30	True	NA	21	True	TATAAA	-13	NA	18153178	18170532	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18153295_18155456_18156202_18160470_18160564_18160918_18160970_18161053_18161186_18161965_18162052_18162201_18162311_18162407_18162507_18162966_18163148_18163262_18163389_18166110_18166303_18167129_18167307_18168474_18168547_18168725_18168897_18169086
transcript_96463.known	chr19	+	988	7	FSM	ENSG00000216490.4	ENST00000407280.4	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	16.9844700306551	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGATGGTGTAATTA	8	True	NA	NA	False	AGTAAA	-16	NA	18173812	18178117	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18173974_18175039_18175223_18175310_18175386_18175604_18175698_18177139_18177293_18177710_18177765_18177848
transcript_96468.known	chr19	+	1578	5	FSM	ENSG00000254858.10	ENST00000599612.3	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_3	8.73212459828649	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	4	True	NA	NA	False	NA	NA	NA	18193217	18196948	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18193469_18193863_18194035_18194776_18194854_18194957_18195087_18195998
transcript_96469.known	chr19	-	1496	5	FSM	ENSG00000105649.10	ENST00000222256.9	1496	5	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_3	15.116216457831	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGGTCCTGCCCACCC	-2	True	NA	-7	True	AATAAA	-32	NA	18204042	18196783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18202512_18202741_18203895
transcript_96483.known	chr19	-	619	4	FSM	ENSG00000284797.1	ENST00000596647.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGGGACCATGTCTTT	1	True	NA	NA	False	AAAACA	-43	NA	18255351	18249949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18250178_18250311_18250473_18252063_18252162_18255219
transcript_96484.known	chr19	+	267	2	FSM	ENSG00000268650.3	ENST00000596473.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCATTCTCCCTGCCCTC	4357	False	NA	9	True	AATAAA	-12	NA	18204740	18205563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18204900_18205455
transcript_96485.known	chr19	+	415	3	FSM	ENSG00000268650.3	ENST00000599416.2	415	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGTGCATAGGTTCAA	4350	False	NA	NA	False	AATAAA	-15	NA	18204733	18209046	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18204900_18208289_18208430_18208937
transcript_96486.known	chr19	-	1113	6	FSM	ENSG00000130520.11	ENST00000600289.6	1113	6	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	1898.49213851414	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACATCCACTGTTCC	57	False	NA	-25	True	AATAAA	-17	NA	18323060	18306915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18307556_18309677_18309862_18310109_18310215_18312603_18312703_18316023_18316066_18323017
transcript_96494.known	chr19	-	1704	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_4	358.518479300579	2382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTCTTGAGTCTTCA	6	True	NA	-12	True	AATAAA	-20	NA	18323076	18306235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
transcript_96496.known	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	1833.29775723058	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	11	True	NA	-16	True	AATAAA	-26	NA	18323071	18306906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
transcript_96498.known	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_3	412.637317211562	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	5	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
transcript_96503.known	chr19	+	7081	5	FSM	ENSG00000130517.14	ENST00000269919.11	7081	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	6.34428877022476	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	-2	True	NA	12	True	AATAAA	-17	NA	18340597	18369950	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363390
transcript_96506.known	chr19	+	769	5	FSM	ENSG00000130517.14	ENST00000604499.6	769	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.5593560409714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGGATCCGATCTGGA	-2	True	NA	NA	False	NA	NA	NA	18340597	18363678	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363430
transcript_96507.known	chr19	+	1200	2	FSM	ENSG00000130513.7	ENST00000252809.3	1200	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTGTCCAGGATAA	0	True	NA	19	True	AATAAA	-16	NA	18386157	18389176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18386467_18388285
transcript_96508.known	chr19	-	2427	2	FSM	ENSG00000175489.10	ENST00000339007.4	2427	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGAAAATCTTTCA	-4	True	NA	NA	False	AATAAA	-28	NA	18397622	18391136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18392126_18396184
transcript_96509.known	chr19	+	1725	18	FSM	ENSG00000130511.16	ENST00000270061.12	1725	18	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	73.6929005984696	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	0	True	NA	20	True	AATAAA	-26	NA	18419397	18434562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431352_18431419_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
transcript_96513.known	chr19	+	1721	17	FSM	ENSG00000130511.16	ENST00000348495.10	1721	17	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_5	50.300930346764	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	7	False	NA	20	True	AATAAA	-26	NA	18419335	18434562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
transcript_96538.known	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	102.318180202738	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	1	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_96546.known	chr19	-	1703	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_8	236.78119294685	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	8299	False	NA	-29	True	AATAAA	-27	NA	18438167	18434808	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
transcript_96547.nic	chr19	-	1978	10	NIC	ENSG00000105655.19	novel	2252	11	NA	NA	-31	0	intron_retention	FALSE	canonical	3	595	junction_9	102.523107904126	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	8268	False	NA	-42	True	AATAAA	-14	NA	18438198	18434821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18437106_18437598_18437761_18437859_18437989_18438092
transcript_96552.known	chr19	-	1466	9	FSM	ENSG00000105655.19	ENST00000577820.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	254.641138418363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGAAGGCCCCCACA	8351	False	NA	-81	True	NA	NA	NA	18438115	18434860	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859_18437989_18438092
transcript_96560.known	chr19	-	2148	9	FSM	ENSG00000105655.19	ENST00000577916.6	2148	9	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_8	107.431373443701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	-5	True	NA	-42	True	AATAAA	-14	NA	18438164	18434821	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18437106_18437598_18437761_18437859_18437989_18438092
transcript_96563.known	chr19	-	2039	8	FSM	ENSG00000105655.19	ENST00000582811.6	2039	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	268.694120911204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	8355	False	NA	-18	True	AATAAA	-13	NA	18438111	18434387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859
transcript_9658.known	chr1	-	3819	31	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	259.682415012389	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTTGTTTGTATT	NA	False	NA	-8	True	AATAAA	-40	NA	51878937	51789195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792426_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_96582.known	chr19	-	1691	8	FSM	ENSG00000105655.19	ENST00000578963.5	1691	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_7	77.932204969631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	9157	False	NA	-41	True	AATAAA	-15	NA	18437309	18434820	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972
transcript_96583.known	chr19	+	793	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	0.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	8	True	NA	20	True	AATAAA	-26	NA	18433274	18434562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18433614_18433709_18433818_18434216
transcript_96587.known	chr19	-	3970	12	FSM	ENSG00000105656.13	ENST00000262809.9	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	10.0395910489298	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAGCCCAGGCTGCCT	-6	True	NA	-6	True	AATAAA	-16	NA	18522070	18442662	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18444869_18445223_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
transcript_96592.nic	chr19	-	1767	11	ISM	ENSG00000105656.13	ENST00000262809.9	3970	12	-4	2562	-4	-474	5prime_fragment	FALSE	canonical	3	72	junction_4	10.463746938836	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGTGTCTCTTGTGTTG	-10	True	NA	NA	False	NA	NA	NA	18522074	18445224	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
transcript_96594.known	chr19	-	623	2	FSM	ENSG00000105656.13	ENST00000596915.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGCGCATGCCAGGGA	-3	True	NA	NA	False	NA	NA	NA	18522067	18472406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18472883_18521920
transcript_96618.known	chr19	-	1756	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_8	889.330919497911	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	4	True	NA	-10	True	AATAAA	-17	NA	18542972	18531761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
transcript_9662.nic	chr1	-	2766	11	ISM	ENSG00000078618.23	ENST00000352171.12	3594	31	-78	25965	0	754	5prime_fragment	FALSE	canonical	3	830	junction_9	55.803673714192	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCAAAATGCTTTCCA	-1	True	NA	NA	False	ATTAAA	-27	NA	51878805	51815174	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_96620.nic	chr19	-	1788	9	NIC	ENSG00000105701.16	novel	1781	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	1108.21398401888	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCACGGACTCCTGAGC	454	False	NA	-11	True	AATAAA	-16	NA	18543599	18531762	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543481
transcript_96631.known	chr19	-	1781	9	FSM	ENSG00000105701.16	ENST00000597960.7	1781	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1035.05023277858	2890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTTTCTTCTCCCG	-5	True	NA	1	True	AATAAA	-28	NA	18543577	18531750	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543481
transcript_96648.known	chr19	-	1548	8	FSM	ENSG00000105701.16	ENST00000601844.5	1548	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1346.71414175089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCAGGTTCCCTCCCC	-5	True	NA	-62	True	NA	NA	NA	18543577	18531813	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18541678_18541996_18543481
transcript_96680.known	chr19	-	1710	9	FSM	ENSG00000105701.16	ENST00000222308.8	1710	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1108.21398401888	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	529	False	NA	-10	True	AATAAA	-17	NA	18543524	18531761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543485
transcript_96681.known	chr19	-	1292	6	FSM	ENSG00000105701.16	ENST00000544835.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1565.79978285859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-1	True	NA	0	True	AATAAA	-27	NA	18543573	18531751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18541678_18541996_18543485
transcript_96686.known	chr19	+	1327	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	373.736591732734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	-1	True	NA	-43	True	NA	NA	NA	18557875	18569310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
transcript_96687.known	chr19	+	895	6	FSM	ENSG00000105700.11	ENST00000600654.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_5	308.874472885022	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAAAAGTATCAAATACTT	15	False	NA	NA	False	NA	NA	NA	18557891	18569091	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568690_18568829
transcript_9669.known	chr1	-	1020	2	FSM	ENSG00000078618.23	ENST00000491410.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTATATCTCTCAGAGG	33	False	NA	NA	False	TATAAA	-41	NA	51878771	51839991	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51840515_51878274
transcript_96690.known	chr19	+	656	6	FSM	ENSG00000105700.11	ENST00000600372.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	391.365506911378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGACACCAGCCCCG	22	False	NA	NA	False	NA	NA	NA	18557805	18568495	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18560419_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_96693.known	chr19	+	1344	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	108.273669467697	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	-7	True	NA	25	True	AATAAA	-27	NA	18557869	18569378	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_96697.known	chr19	+	1496	5	FSM	ENSG00000105700.11	ENST00000539106.5	1496	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	348.943673821435	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTTCTTCAGTCCT	NA	False	NA	34	True	AATAAA	-36	NA	18557761	18569387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557950_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_96698.known	chr19	+	707	5	FSM	ENSG00000105700.11	ENST00000599319.5	707	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	354.5257395451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCTGCCCCGTTCTGT	662	False	NA	NA	False	NA	NA	NA	18558538	18568720	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18558605_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_96702.known	chr19	-	1746	9	FSM	ENSG00000006016.12	ENST00000684169.1	1746	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	12.5393131789584	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-7	True	NA	-4	True	AATAAA	-17	NA	18606799	18593236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18593580_18594064_18594113_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
transcript_96706.known	chr19	+	1621	8	FSM	ENSG00000105696.9	ENST00000262817.8	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	5.17450579322138	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAGGCTGAGCCTGCTT	-22	True	NA	7	True	AATAAA	-17	NA	18612869	18621039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18613130_18613871_18614017_18614103_18614196_18615974_18616128_18616999_18617103_18618154_18618273_18618374_18618493_18620407
transcript_96707.known	chr19	+	1683	7	FSM	ENSG00000105696.9	ENST00000598660.1	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	5.18812747209113	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGGGGAGGAATAAACCA	-15	True	NA	-26	True	TATAAA	-22	NA	18612876	18621006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18613130_18613871_18614017_18614103_18614196_18615974_18616128_18616999_18617103_18618154_18618493_18620407
transcript_96708.known	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2813.21656471733	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	-9	True	NA	29	True	AATAAA	-17	NA	18571854	18575229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96709.known	chr19	+	779	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2809.32480144251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	11	True	NA	42	True	AATAAA	-30	NA	18571874	18575242	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96712.known	chr19	+	572	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_1	1388.27417591051	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	63	False	NA	41	True	AATAAA	-29	NA	18571801	18575241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96714.known	chr19	+	2848	5	FSM	ENSG00000221983.8	ENST00000442744.7	2848	5	0	0	0	0	multi-exon	FALSE	canonical	3	1378	junction_1	1904.14592074767	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGGCAGGAGAAACTGAC	-7	True	NA	104	True	NA	NA	NA	18571856	18577550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571910_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96715.known	chr19	+	668	5	FSM	ENSG00000221983.8	ENST00000598780.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	2431.59396024501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTCCTGCCCAGGCCC	63	False	NA	-30	True	NA	NA	NA	18571926	18575170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18572180_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96716.nic	chr19	+	1233	5	NIC	ENSG00000221983.8	novel	779	6	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_1	2495.20694282058	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	-3	True	NA	41	True	AATAAA	-29	NA	18571860	18575241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96717.known	chr19	+	707	5	FSM	ENSG00000221983.8	ENST00000599551.5	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	2420.85098673999	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	876	False	NA	41	True	AATAAA	-29	NA	18572739	18575241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18572961_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96718.known	chr19	+	743	5	FSM	ENSG00000221983.8	ENST00000595158.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	2434.17238245363	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAATTGGTGTCCTCAT	18	False	NA	34	True	AATAAA	-22	NA	18571881	18575234	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18572146_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96721.known	chr19	+	767	5	FSM	ENSG00000006015.18	ENST00000358607.11	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	102.146952964834	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCTGCCATCTCTGTG	-4	True	NA	15	True	AATAAA	-17	NA	18588797	18592337	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589078_18589412_18589684_18590853_18590934_18592107
transcript_96722.known	chr19	+	702	5	FSM	ENSG00000006015.18	ENST00000450195.6	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	205.64821297546	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	-6	True	NA	14	True	AATAAA	-16	NA	18588795	18592336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589078_18589478_18589684_18590853_18590934_18592107
transcript_96728.known	chr19	+	491	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	247.140086230911	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	0	True	NA	14	True	AATAAA	-16	NA	18588801	18592336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
transcript_96729.known	chr19	+	1081	4	FSM	ENSG00000006015.18	ENST00000597371.1	1081	4	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_2	21.3541565040626	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	7	True	NA	5	True	AATAAA	-7	NA	18588808	18592327	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589684_18590853_18590934_18592107
transcript_96731.known	chr19	+	2275	3	FSM	ENSG00000006015.18	ENST00000600997.5	2275	3	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_2	24	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	-4	True	NA	14	True	AATAAA	-16	NA	18588797	18592336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589684_18590853
transcript_96735.known	chr19	+	514	4	FSM	ENSG00000221983.8	ENST00000597451.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	5361	junction_3	344.891287219611	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	1401	False	NA	41	True	AATAAA	-29	NA	18573264	18575241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18573404_18573661_18573749_18574869_18574973_18575056
transcript_96736.known	chr19	+	4351	3	FSM	ENSG00000167487.12	ENST00000300976.9	4351	3	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	6	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTGAATCTTCACTTT	1	True	NA	14	True	AAAAAG	-22	NA	18637027	18671721	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18637138_18664260_18664444_18667663
transcript_96740.known	chr19	+	6879	14	FSM	ENSG00000105662.16	ENST00000321949.13	6879	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	16.8273516428941	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCTTCCTCTTTTTTC	-2	True	NA	17	True	AATAAA	-19	NA	18683679	18782333	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18768484_18768794_18771441_18771547_18774899_18774987_18775640_18775822_18777170
transcript_96744.nnic	chr19	+	2451	13	NIC	ENSG00000105662.16	novel	6879	14	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	22.762664362699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTATATTTCTGAGC	8	False	NA	7	True	AATAAA	-16	NA	18683639	18777952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18768484_18768794_18771441_18771547_18775640_18775822_18777170
transcript_96750.nnic	chr19	+	2118	12	NIC	ENSG00000105662.16	novel	6879	14	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	23.0486370404301	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTATATTTCTGAGC	2	True	NA	7	True	AATAAA	-16	NA	18683645	18777952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18774899_18774987_18775640_18775822_18777170
transcript_96752.nic	chr19	+	2044	11	NIC	ENSG00000105662.16	novel	6879	14	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	23.1378477823673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTATATTTCTGAGC	1	True	NA	7	True	AATAAA	-16	NA	18683632	18777952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18775640_18775822_18777170
transcript_9677.known	chr1	-	12780	5	FSM	ENSG00000169213.7	ENST00000371655.4	12780	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	14.0423466699836	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	13	True	NA	-10	True	ATTAAA	-17	NA	51990700	51907955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_96777.nic	chr19	+	2016	5	ISM	ENSG00000105662.16	ENST00000321949.13	6879	14	-126	31129	-124	-26734	5prime_fragment	FALSE	canonical	3	72	junction_1	11.4537111889553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGTGCAACAGGCATA	NA	False	NA	NA	False	AGTAAA	-6	NA	18683553	18751204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780
transcript_96778.nic	chr19	+	2082	5	ISM	ENSG00000105662.16	ENST00000321949.13	6879	14	-22	30959	-20	-26564	5prime_fragment	FALSE	canonical	3	72	junction_1	11.4537111889553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGGGAGTGTTTGCAC	14	False	NA	NA	False	AATACA	-7	NA	18683657	18751374	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780
transcript_96784.known	chr19	+	5321	24	FSM	ENSG00000005007.13	ENST00000262803.10	5321	24	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_13	34.7295791407956	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGGTTGGATAAACTG	0	True	NA	18	True	AATAAA	-15	NA	18831958	18868230	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18832441_18845979_18846120_18847743_18847834_18850074_18850243_18850687_18850869_18852134_18852297_18852986_18853072_18853251_18853351_18854600_18854710_18854878_18855039_18855123_18855243_18855924_18856090_18856185_18856301_18856876_18857021_18857319_18857534_18860320_18860439_18860825_18860983_18862009_18862153_18863437_18863613_18864169_18864252_18865288_18865451_18865560_18865779_18866043_18866167_18866520
transcript_96787.known	chr19	-	2094	6	FSM	ENSG00000223802.9	ENST00000429504.6	2094	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	25.2222124326951	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCGAGCTGGTAT	2	True	NA	-4	True	AATAAA	-22	NA	18896135	18877908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
transcript_96790.known	chr19	+	1882	14	FSM	ENSG00000105671.12	ENST00000595858.5	1882	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	75.6396783886973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGACTTTCGAAGA	10	True	NA	26	True	AATAAA	-17	NA	18919726	18928626	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924852_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_96791.known	chr19	+	2438	14	FSM	ENSG00000105671.12	ENST00000629999.3	2438	14	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	62.4117838971998	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACACAGCCACGCTT	-12	True	NA	NA	False	NA	NA	NA	18919704	18929189	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_96800.known	chr19	+	1793	13	FSM	ENSG00000105671.12	ENST00000247003.9	1793	13	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_8	11.5674351329738	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	-2	True	NA	30	True	AATAAA	-21	NA	18919714	18928630	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_96802.known	chr19	+	1691	13	FSM	ENSG00000105671.12	ENST00000602113.5	1691	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	51.4837487843386	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAGTCTGACTTTCG	21	True	NA	22	True	AATAAA	-13	NA	18919737	18928622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920650_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_96812.known	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	1124.541635512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-6	True	NA	-51	True	NA	NA	NA	18919380	18899562	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_96826.known	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	TRUE	canonical	3	2182	junction_7	247.864259944883	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-13	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_96837.known	chr19	-	1607	10	FSM	ENSG00000051128.19	ENST00000542541.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	143.321274255851	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGCTGGTTTTCTATG	0	True	NA	NA	False	NA	NA	NA	18940304	18929442	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18939850
transcript_9684.known	chr1	-	1416	7	FSM	ENSG00000117862.13	ENST00000371626.9	1416	7	0	0	0	0	multi-exon	TRUE	canonical	3	1216	junction_2	108.304226859138	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGATGGCCTTTTT	-5	True	NA	-8	True	AATAAA	-15	NA	52055191	52020130	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
transcript_96840.known	chr19	-	1560	10	FSM	ENSG00000051128.19	ENST00000392351.8	1560	10	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_9	81.8141525382715	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTGTGTGGTATGT	7	True	NA	-16	True	NA	NA	NA	18941217	18929202	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941050
transcript_96841.nic	chr19	-	1502	10	NIC	ENSG00000051128.19	novel	1560	10	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	149.430110836777	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGTGTGTGGTA	NA	False	NA	-19	True	NA	NA	NA	18941304	18929205	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941192
transcript_96847.known	chr19	-	907	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	917.587019034162	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCAGCACCCCCAT	-1	True	NA	-61	True	NA	NA	NA	18919375	18899572	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
transcript_96851.known	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	869.002652110452	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	11	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_96871.known	chr19	+	1665	3	FSM	ENSG00000269019.2	ENST00000601106.2	1665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGAAACCCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	18940234	18947452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18940625_18946080_18946229_18946325
transcript_96876.known	chr19	-	868	3	FSM	ENSG00000105669.14	ENST00000597646.5	868	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCAGTGGTGAGATCT	9	True	NA	NA	False	NA	NA	NA	18919365	18910554	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18911217_18912983_18913047_18919222
transcript_9690.known	chr1	-	1020	3	FSM	ENSG00000117862.13	ENST00000610127.2	1020	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	742.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAGTAAATGGAAGTGC	-5	True	NA	NA	False	NA	NA	NA	52055191	52033284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52034052_52041536_52041598_52054999
transcript_96917.known	chr19	-	3640	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	47.665081558726	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	317	False	NA	-13	True	AATAAA	-16	NA	19033559	18990892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_9692.known	chr1	-	1708	1	FSM	ENSG00000198841.4	ENST00000371614.2	1708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATCTCTTTCACTTAA	-11	True	NA	-4	True	AATAAA	-19	NA	52033810	52032102	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52032100_52033800
transcript_96922.known	chr19	-	6189	11	FSM	ENSG00000064607.17	ENST00000452918.7	6189	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	86.3421102359677	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-6	True	NA	-13	True	AATAAA	-16	NA	19033517	18990892	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18993741_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_96945.known	chr19	-	4752	10	FSM	ENSG00000064607.17	ENST00000600377.1	4752	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	129.349178105403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGGCTCTGCAGCTGCT	-28	True	NA	NA	False	NA	NA	NA	19033539	18992924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033488
transcript_9696.known	chr1	+	4533	6	FSM	ENSG00000134717.18	ENST00000313334.13	4533	6	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_1	73.6966756373719	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTCTGATGCGGCAG	-17	True	NA	4	True	AATACA	-17	NA	52056294	52090716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_96972.known	chr19	+	2461	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	152.687129041711	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	-10	True	NA	20	True	AATAAA	-21	NA	19033602	19058176	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_96997.nnic	chr19	+	2405	8	NNC	ENSG00000105676.14	novel	2383	8	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	165.501341014359	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGGAGGGGTCTCTTCCA	877	False	NA	15	True	AATAAA	-16	NA	19033568	19058171	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057392
transcript_96998.known	chr19	+	2383	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	59.1801124896338	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCTTCCATAGCTTG	883	False	NA	22	True	AATAAA	-23	NA	19033574	19058178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_970.known	chr1	+	1257	8	FSM	ENSG00000169972.12	ENST00000379031.10	1257	8	0	0	0	0	multi-exon	TRUE	canonical	3	302	junction_1	30.8439125075842	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	-23	True	NA	9	True	AATAAA	-17	NA	1308596	1311677	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1308721_1308914_1308973_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
transcript_97008.known	chr19	+	2412	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	136.592048652555	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	-3	True	NA	3	True	AATAAA	-4	NA	19033609	19058159	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_9702.known	chr1	+	794	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_3	442.752188023955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTCTTTTCCC	4	True	NA	9	True	AATAAA	-14	NA	52056270	52087155	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
transcript_97053.known	chr19	+	3267	8	FSM	ENSG00000181035.14	ENST00000318596.8	3267	8	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	5.0548017179869	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGTTTGAATTAATACA	-12	True	NA	NA	False	AATAAA	-31	NA	19063993	19113030	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19064116_19096090_19096206_19101780_19101887_19104912_19104939_19105560_19105728_19106268_19106386_19107893_19108046_19110568
transcript_97054.nic	chr19	+	3075	8	NIC	ENSG00000181035.14	novel	3267	8	NA	NA	-22	-145	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	10.7399692166929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCCTGCTCCTGGCTC	NA	False	NA	11	True	AATAAA	-14	NA	19063971	19112885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19064047_19096090_19096206_19101780_19101887_19104912_19104939_19105560_19105728_19106268_19106386_19107893_19108046_19110568
transcript_9706.known	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	450.064439830565	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	-8	True	NA	45	True	NA	NA	NA	52056303	52088418	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_97062.nic	chr19	+	2845	4	ISM	ENSG00000181035.14	ENST00000318596.8	3267	8	41475	145	-394	-145	3prime_fragment	FALSE	canonical	3	27	junction_3	4.18993502999218	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCCTGCTCCTGGCTC	9467	False	NA	11	True	AATAAA	-14	NA	19105468	19112885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_19105728_19106268_19106386_19107893_19108046_19110568
transcript_97074.known	chr19	-	1654	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	108.452830894014	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTTCTGAACAAATAA	25	True	NA	-48	True	NA	NA	NA	19138447	19119659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_97078.known	chr19	-	2251	12	FSM	ENSG00000064545.15	ENST00000162044.14	2251	12	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	46.749552523602	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-6	True	NA	NA	False	NA	NA	NA	19138478	19119168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_97079.nic	chr19	-	1815	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	107.827379647532	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	9209	False	NA	-3	True	AATAAA	-25	NA	19138519	19119614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138456
transcript_97080.nic	chr19	-	1849	12	NIC	ENSG00000064545.15	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	107.827379647532	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-21	True	NA	-3	True	AATAAA	-25	NA	19138493	19119614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134917_19138425
transcript_97099.nic	chr19	-	1716	11	NIC	ENSG00000064545.15	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	109.2426656577	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-21	True	NA	-3	True	AATAAA	-25	NA	19138493	19119614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19138425
transcript_9710.known	chr1	+	5148	19	FSM	ENSG00000157077.16	ENST00000287727.8	5148	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	3.93661194179042	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCACTCTTTGTACA	-13	True	NA	3	True	AATAAA	-14	NA	52142088	52346634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487_52239596_52263772_52263873_52266654_52266832_52268462_52268633_52274463_52274585_52278491_52278615_52281660_52281817_52293452_52293678_52295894_52295978_52303820_52303926_52332767_52332919_52334687_52334769_52337771_52337935_52340125_52340232_52344767_52344945_52346059
transcript_97113.known	chr19	-	1923	11	FSM	ENSG00000064545.15	ENST00000587406.5	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_10	48.2344275388441	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-21	True	NA	-3	True	AATAAA	-25	NA	19138493	19119614	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_97122.known	chr19	-	1799	10	FSM	ENSG00000064545.15	ENST00000589448.5	1799	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	114.118846432617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATAAAGGAGCATGCC	10	True	NA	-37	True	NA	NA	NA	19138462	19119648	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132755_19133129_19133211_19138425
transcript_97123.known	chr19	-	1930	10	FSM	ENSG00000064545.15	ENST00000450333.6	1930	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	118.575807913007	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	6	True	NA	NA	False	NA	NA	NA	19138466	19119168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_97154.known	chr19	-	1754	12	FSM	ENSG00000064545.15	ENST00000587985.6	1754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	112.893718760333	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATGCCGATTTTTAC	10	True	NA	-28	True	NA	NA	NA	19138462	19119639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121317_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_97164.nic	chr19	-	2098	11	NIC	ENSG00000064489.23	novel	1804	13	NA	NA	-469	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	36.6099713193004	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGACTGTGACTCGCCTC	NA	False	NA	-7	True	AATAAA	-24	NA	19192627	19145568	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182572_19182684_19192080
transcript_97165.known	chr19	+	1376	10	FSM	ENSG00000064490.14	ENST00000303088.9	1376	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	102.301056557787	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	3	True	NA	22	True	AATAAA	-15	NA	19192257	19201866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_97170.known	chr19	+	1325	9	FSM	ENSG00000064490.14	ENST00000456252.7	1325	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	138.274862140593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	-12	True	NA	22	True	AATAAA	-15	NA	19192242	19201866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_97173.known	chr19	-	1425	9	FSM	ENSG00000213999.17	ENST00000424583.7	1425	9	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_8	10.6938942859933	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGACTCGCCTCAT	-3	True	NA	-5	True	AATAAA	-26	NA	19170263	19145566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19170204
transcript_97178.known	chr19	-	877	6	FSM	ENSG00000254901.8	ENST00000494489.6	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	74.1862520956545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGAACATTGTGTGGA	NA	False	NA	-106	True	NA	NA	NA	19192588	19177007	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192529
transcript_97180.known	chr19	-	859	6	FSM	ENSG00000184162.15	ENST00000420605.7	859	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.2363857861548	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAATGTGTGAATTGTG	44	True	NA	-7	True	TATAAA	-15	NA	19203357	19201415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19201564_19201930_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_97183.known	chr19	-	1290	5	FSM	ENSG00000184162.15	ENST00000331552.12	1290	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.5452186216786	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-13	True	NA	0	True	TATAAA	-22	NA	19203414	19201408	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_97185.known	chr19	-	801	4	FSM	ENSG00000254901.8	ENST00000585679.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	54.3507129668048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	4	True	NA	-4	True	NA	NA	NA	19192139	19176905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19192080
transcript_97187.known	chr19	-	899	4	FSM	ENSG00000184162.15	ENST00000544883.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.6923022759522	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGAAAAGGTGGGCTGT	42	True	NA	NA	False	NA	NA	NA	19203359	19201638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202042_19202330_19202399_19202790_19202882_19203022
transcript_97189.known	chr19	-	891	4	FSM	ENSG00000184162.15	ENST00000538165.2	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	12.684198393627	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCCACGCTCACACTT	26	True	NA	NA	False	NA	NA	NA	19203375	19202057	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202399_19202469_19202576_19202790_19202882_19203022
transcript_97195.known	chr19	-	572	2	FSM	ENSG00000254901.8	ENST00000462498.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCATCAGCATCCGGGA	NA	False	NA	NA	False	NA	NA	NA	19192591	19182622	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19182684_19192080
transcript_97196.known	chr19	-	375	2	FSM	ENSG00000184162.15	ENST00000539678.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCACCAGTTTCCCTT	557	False	NA	NA	False	NA	NA	NA	19202844	19202077	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202399_19202790
transcript_97198.known	chr19	-	1804	13	FSM	ENSG00000064489.23	ENST00000602804.5	1804	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	71.2179752590594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGACTGTGACTCGC	-15	True	NA	-10	True	AATAAA	-21	NA	19192158	19145571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_97199.known	chr19	-	1489	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	9.67241208569794	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACTCATGTGCCAGGA	NA	False	NA	-9	True	AATAAA	-13	NA	19192589	19181881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
transcript_97200.known	chr19	-	992	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	32.9933326597966	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-9	True	NA	-4	True	NA	NA	NA	19192152	19176905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_97201.known	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	119.481533027886	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	84	False	NA	22	True	AATAAA	-15	NA	19192910	19201866	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_97202.known	chr19	+	389	3	FSM	ENSG00000064490.14	ENST00000540977.1	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTTGCTGTGCTTCCC	4700	False	NA	25	True	AATAAA	-18	NA	19198636	19201869	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19198724_19199153_19199235_19201648
transcript_97203.known	chr19	+	6402	15	FSM	ENSG00000130287.14	ENST00000252575.11	6402	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_14	11.9343441976747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCGTCACCACCTGAT	1	True	NA	17	True	AATAAA	-17	NA	19211957	19252233	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252_19238412_19240602_19240686_19245312_19245458_19248699_19248883_19249765
transcript_97210.nic	chr19	+	3775	11	ISM	ENSG00000130287.14	ENST00000252575.11	6402	15	-117	13687	-117	-246	5prime_fragment	FALSE	canonical	3	17	junction_7	8.8068155425216	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGACTGCTTCTTAATG	NA	False	NA	-15	True	NA	NA	NA	19211840	19238546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252
transcript_97211.nic	chr19	+	3914	11	ISM	ENSG00000130287.14	ENST00000252575.11	6402	15	-10	13441	-10	0	5prime_fragment	FALSE	canonical	3	17	junction_7	8.8068155425216	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGATCCTATGTGTGCTG	NA	False	NA	13	True	AGTAAA	-32	NA	19211947	19238792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252
transcript_97213.nnic	chr19	+	3525	11	NNC	ENSG00000130287.14	novel	6402	15	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	10.7280007457121	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGATCCTATGTGTGCTG	NA	False	NA	13	True	AGTAAA	-32	NA	19211934	19238792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227682_19228640_19233788_19233906_19234982_19235097_19238252
transcript_97216.known	chr19	-	1518	10	FSM	ENSG00000213996.13	ENST00000389363.5	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	11.3311544746506	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGCCTAAGTGTTTC	-22	True	NA	-2	True	AGTAAA	-21	NA	19273301	19264365	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268755_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
transcript_97225.known	chr19	-	4342	5	FSM	ENSG00000187664.9	ENST00000291481.8	4342	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	29.1461832835793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTCATTCTTCTGACA	-3	True	NA	NA	False	AATAAA	-16	NA	19262804	19254755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19258209_19258522_19258856_19260812_19261176_19261445_19261564_19262729
transcript_97227.nic	chr19	-	3592	4	ISM	ENSG00000187664.9	ENST00000291481.8	4342	5	1031	885	-90	-885	3prime_fragment	FALSE	canonical	3	74	junction_3	4.64279609239471	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGCCAGTGGGTAAT	1914	False	NA	-6	True	AATAAA	-29	NA	19261773	19255640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_19258209_19258522_19258856_19260812_19261176_19261445
transcript_97234.nnic	chr19	-	2042	14	NIC	ENSG00000105705.16	novel	2566	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_9	92.7383543463216	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGTCCTGTT	-6	True	NA	-5	True	AATAAA	-19	NA	19320509	19276514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303407_19303723_19303848_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_97237.known	chr19	-	2566	14	FSM	ENSG00000105705.16	ENST00000247001.10	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	55.3902774883525	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCTAAAGGAATGTCA	-6	True	NA	NA	False	AATAAA	-19	NA	19320509	19276032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19303848_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_97240.known	chr19	-	2282	14	FSM	ENSG00000105705.16	ENST00000588731.6	2282	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	96.5446213174273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGCCTGGTCCTGTTGC	-6	True	NA	-3	True	AATAAA	-21	NA	19320509	19276512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19304044_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_97255.nic	chr19	-	4085	13	NIC	ENSG00000105705.16	novel	2282	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	213	junction_9	52.3168763933356	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGTCCTGTT	-6	True	NA	-5	True	AATAAA	-19	NA	19320509	19276514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19306077_19310096_19310201_19316421_19316594_19320462
transcript_97256.nic	chr19	-	1960	13	NIC	ENSG00000105705.16	novel	2566	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	94.4999632569006	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGTCCTGTT	-6	True	NA	-5	True	AATAAA	-19	NA	19320509	19276514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_97268.nic	chr19	-	4362	12	NIC	ENSG00000105705.16	novel	2282	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	250	junction_10	45.0213906919223	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGTCCTGTT	-8	True	NA	-5	True	AATAAA	-19	NA	19320511	19276514	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19306077_19310096_19310201_19316421_19316594_19320462
transcript_97284.known	chr19	-	715	4	FSM	ENSG00000105705.16	ENST00000588580.6	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	31.0948370133836	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGCGTGGGCTTCATCT	949	False	NA	NA	False	GGGGCT	-17	NA	19320470	19305645	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19306077_19310096_19310201_19316421_19316594_19320462
transcript_97287.nic	chr19	+	3851	19	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_13	32.4550971857016	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATATTCTACTCGAG	-16	True	NA	6	True	ATTAAA	-15	NA	19320820	19357755	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_97288.nic	chr19	+	4175	19	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_13	32.4550971857016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	-16	True	NA	NA	False	NA	NA	NA	19320820	19358079	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_97289.nic	chr19	+	4968	19	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_13	32.4550971857016	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTTGTTGTT	NA	False	NA	29	True	AGTAAA	-18	NA	19320702	19358754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_97290.known	chr19	+	4845	19	FSM	ENSG00000129933.21	ENST00000262815.13	4845	19	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_13	18.2361058221199	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTTGTTGTT	-8	True	NA	29	True	AGTAAA	-18	NA	19320828	19358754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347367_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_9731.known	chr1	-	5338	25	FSM	ENSG00000154222.15	ENST00000284376.8	5338	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_18	8.2525248661647	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAGTCTTGCTTACAA	-38	True	NA	-2	True	AATAAA	-20	NA	52366205	52350596	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52353224_52353517_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
transcript_97316.known	chr19	+	5671	12	FSM	ENSG00000167491.18	ENST00000360315.7	5671	12	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_8	216.774400001171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTTGTCCCTTCT	-1	True	NA	17	True	AATAAA	-20	NA	19385832	19508931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19386139_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501120_19501417_19501968_19502044_19502330_19502527_19505343
transcript_97324.known	chr19	+	5714	12	FSM	ENSG00000167491.18	ENST00000683918.1	5714	12	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	80.2023267938063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTTGTCCCTTCTG	5	True	NA	18	True	AATAAA	-21	NA	19405674	19508932	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19406020_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
transcript_97342.known	chr19	+	1100	7	FSM	ENSG00000258674.5	ENST00000555938.1	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	4194.85534116891	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGATGTCCCCTGGC	-2	True	NA	NA	False	NA	NA	NA	19516226	19536076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19535033_19535145_19535336_19535451_19535528
transcript_97343.known	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	8400	junction_3	131.575073627188	1930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	-4	True	NA	23	True	AATAAA	-17	NA	19516224	19528198	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
transcript_97344.known	chr19	+	502	5	FSM	ENSG00000186010.19	ENST00000606722.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	3703.80291052318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGCCTGTTTTCCTGG	32	False	NA	20	True	AATAAA	-14	NA	19516260	19528195	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527373_19527700_19527771_19528006
transcript_97345.known	chr19	+	1166	5	FSM	ENSG00000186010.19	ENST00000502506.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3695.07510072529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGTTTTCCTGGGG	-8	True	NA	22	True	AATAAA	-16	NA	19515735	19528197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526024_19526261_19527280_19527353_19527700_19527771_19528006
transcript_97346.known	chr19	+	576	4	FSM	ENSG00000186010.19	ENST00000428459.6	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	8400	junction_3	144.148072018556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACAACCCGCTGGGTG	1	True	NA	NA	False	NA	NA	NA	19516229	19528022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700
transcript_97350.known	chr19	+	4199	8	FSM	ENSG00000160161.9	ENST00000291495.5	4199	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	3.91751691451488	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGTGTCAGGCTCTAG	-15	True	NA	27	True	ATTAAA	-17	NA	19538264	19546659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19538414_19539678_19539778_19540203_19540477_19541090_19541247_19542374_19542651_19542863_19542973_19543247_19543406_19543680
transcript_97354.known	chr19	-	1495	8	FSM	ENSG00000105717.14	ENST00000251203.14	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	4.92391083988974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGATGTCTGTTTGCCAG	13	True	NA	-4	True	ATTAAA	-19	NA	19618687	19561712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570108_19570300_19570585_19570834_19599291_19599366_19618510
transcript_97355.known	chr19	-	1416	8	FSM	ENSG00000105717.14	ENST00000557978.6	1416	8	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_4	6.49646685765833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTTGCCAGATTTGT	7	True	NA	2	True	ATTAAA	-25	NA	19618693	19561706	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570098_19570300_19570686_19570834_19599291_19599366_19618510
transcript_97358.nic	chr19	-	1850	7	NIC	ENSG00000105717.14	novel	1495	8	NA	NA	-63	0	intron_retention	FALSE	canonical	3	12	junction_6	4.13991411612474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGATGTCTGTTTGCCAG	9778	False	NA	-4	True	ATTAAA	-19	NA	19618756	19561712	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570108_19570834_19599291_19599366_19618510
transcript_97363.known	chr19	-	1034	6	FSM	ENSG00000105717.14	ENST00000558222.1	1034	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	6.15142259969188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCATGATCCCAACCAACA	19	True	NA	NA	False	NA	NA	NA	19618681	19564774	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19565090_19569448_19569585_19570108_19570300_19570686_19570834_19599291_19599366_19618510
transcript_97367.known	chr19	-	2546	6	FSM	ENSG00000064547.14	ENST00000542587.5	2546	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	97.6635039305881	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	8618	False	NA	-33	True	AGTAAA	-16	NA	19628930	19623668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628168_19628427
transcript_97391.nnic	chr19	-	1909	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	106.032489779732	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	8963	False	NA	-33	True	AGTAAA	-16	NA	19628585	19623668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19624570_19626542_19627285_19627396_19627505_19628427
transcript_97398.nic	chr19	-	1802	3	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	131	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	8962	False	NA	-33	True	AGTAAA	-16	NA	19628586	19623668	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19624570_19626542_19627285_19628427
transcript_97399.known	chr19	-	1823	3	FSM	ENSG00000064547.14	ENST00000586703.1	1823	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	137.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTCTCCAAAACATTTGT	12	True	NA	-32	True	AGTAAA	-17	NA	19628208	19623667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19624570_19626542_19627347_19628091
transcript_97404.known	chr19	-	1786	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	99.5	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	0	True	NA	-19	True	AGTAAA	-30	NA	19628220	19623654	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19624570_19626542_19627285_19628091
transcript_97410.known	chr19	-	3528	21	FSM	ENSG00000089639.11	ENST00000203556.9	3528	21	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_9	13.5624481565829	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTGGGTGCATCTCTG	-25	True	NA	-4	True	AATAAA	-13	NA	19643657	19629475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
transcript_97417.known	chr19	-	2987	20	FSM	ENSG00000089639.11	ENST00000587238.5	2987	20	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	19.3741410318037	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGTTCCTATAAGGAAAA	71	False	NA	NA	False	NA	NA	NA	19643561	19629842	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
transcript_97419.nic	chr19	-	3316	20	NIC	ENSG00000089639.11	novel	3528	21	NA	NA	15	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_3	23.1991259745573	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTGGGTGCATCTCTG	-10	True	NA	-4	True	AATAAA	-13	NA	19643642	19629475	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19630337_19630470_19630538_19633802_19634191_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
transcript_97436.nic	chr19	-	3782	26	NIC	ENSG00000105726.17	novel	3849	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_13	95.9539389498941	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTCCACCTCGTCT	-1	True	NA	-11	True	AATAAA	-23	NA	19663679	19645197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654075_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659792_19659897_19659988_19663270
transcript_97438.known	chr19	-	3849	26	FSM	ENSG00000105726.17	ENST00000357324.11	3849	26	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_13	56.6870143860126	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTCCACCTCGTCT	2	True	NA	-11	True	AATAAA	-23	NA	19663676	19645197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654145_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659792_19659897_19659988_19663270
transcript_97463.known	chr19	+	1152	4	FSM	ENSG00000181896.12	ENST00000444249.6	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	17.1075032271418	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	15	True	NA	12	True	AATAAA	-18	NA	19668850	19680032	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19668967_19677863_19677987_19678725_19678787_19679180
transcript_97464.known	chr19	-	2963	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATAACATTTTTCTT	-7	True	NA	-21	True	AATAAA	-15	NA	19733112	19710471	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
transcript_97468.known	chr19	+	447	2	FSM	ENSG00000267419.3	ENST00000586924.2	709	2	238	24	188	-24	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAAAATCAGTGAGA	-5	True	NA	NA	False	AATAAA	-4	NA	19776823	19786884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19776995_19786608
transcript_97469.known	chr19	-	3323	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	4.32049379893857	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAGAGTAATAGTTT	-18	True	NA	NA	False	AATAAA	-16	NA	19821750	19792710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
transcript_97470.known	chr19	-	432	3	FSM	ENSG00000266904.7	ENST00000589508.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGAATCACTTTATAG	19	False	NA	NA	False	AATACA	-24	NA	19776385	19761157	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19761422_19762537_19762647_19776326
transcript_97471.known	chr19	+	3542	4	FSM	ENSG00000256771.5	ENST00000589717.2	3542	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	16.062378404209	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGTTTCAGAGTAATG	-6	True	NA	NA	False	GATAAA	-7	NA	19865881	19894674	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473
transcript_97476.known	chr19	+	1334	4	FSM	ENSG00000184635.16	ENST00000592160.5	1334	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	133.247472354596	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCCATTTTGGTTT	-8	True	NA	NA	False	NA	NA	NA	19900970	19932997	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19932007
transcript_97478.known	chr19	+	2763	4	FSM	ENSG00000184635.16	ENST00000343769.6	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	14.1656862405839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTTGCTGTTTGTA	-3	True	NA	NA	False	AATAAA	-20	NA	19900945	19935575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19933181
transcript_97485.known	chr19	-	3244	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	9.7410927974683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	-3	True	NA	-3	True	AATAAA	-23	NA	20039505	20004417	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
transcript_9749.known	chr1	-	5642	24	FSM	ENSG00000154222.15	ENST00000371586.6	5642	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	12.8463362632123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTTGCTTACAATTAA	-26	True	NA	2	True	AATAAA	-24	NA	52366193	52350592	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357917_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
transcript_97490.known	chr19	-	395	3	FSM	ENSG00000197124.12	ENST00000599240.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATGGAGTCAGTACAAA	79	False	NA	NA	False	AATAAA	-14	NA	20039450	20030716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20030883_20030992_20031114_20039342
transcript_97493.nnic	chr19	-	1571	3	NNC	ENSG00000267383.8	novel	618	2	NA	NA	-6	870	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAAGACCCACCAGTGT	NA	False	NA	NA	False	NA	NA	NA	20238466	20227139	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_20228484_20231207_20231256_20238287
transcript_97494.nnic	chr19	-	488	3	NNC	ENSG00000267383.8	novel	618	2	NA	NA	-6	-213	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGTTTAGAGATAA	NA	False	NA	NA	False	AAAAAG	-36	NA	20238466	20228222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_20228484_20231207_20231256_20238287
transcript_97496.known	chr19	-	618	2	FSM	ENSG00000267383.8	ENST00000585816.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGCCACAAAGATACTC	13	True	NA	NA	False	AATACA	-2	NA	20238431	20228009	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20228484_20238287
transcript_97505.known	chr19	+	1918	6	FSM	ENSG00000213988.11	ENST00000469078.5	1918	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	108.884158627415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	1	True	NA	5	True	TATAAA	-5	NA	20077993	20127018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20121221_20121347_20125005_20126167_20126751
transcript_97509.nic	chr19	+	1822	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	108.113366426173	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	NA	False	NA	5	True	TATAAA	-5	NA	20077964	20127018	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20125005_20126167_20126751
transcript_97517.known	chr19	+	3744	4	FSM	ENSG00000213988.11	ENST00000418063.3	3744	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	55.4156014935225	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	7	True	NA	5	True	AATAAA	-19	NA	20077999	20121165	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780
transcript_97518.nnic	chr19	+	672	4	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-29	11	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	121.013314235344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCATTTCTCTGTCTTT	NA	False	NA	16	True	TATAAA	-16	NA	20077964	20127029	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20126751
transcript_97520.known	chr19	+	1724	4	FSM	ENSG00000213988.11	ENST00000474284.1	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	26.3986531642978	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTTGAAATTTCCT	1	True	NA	63	True	NA	NA	NA	20077993	20127076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20078136_20105220_20105317_20125005_20126167_20126751
transcript_97524.known	chr19	+	734	4	FSM	ENSG00000256229.8	ENST00000597083.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	43.3666538560063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTCTCTCACCCTCGAC	13	False	NA	NA	False	ATTAAA	-17	NA	20167227	20188776	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20188398
transcript_97525.known	chr19	+	3895	4	FSM	ENSG00000256229.8	ENST00000335117.9	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	35.4055865020699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATTATGTGTGAATTT	-1	True	NA	20	True	AATAAA	-21	NA	20167213	20200488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20196963
transcript_97534.known	chr19	-	1004	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	10	106	-1	-4	multi-exon	FALSE	canonical	3	65	junction_1	216.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTTCAGTCTTTTTTT	-1	True	NA	-5	True	ATTAAA	-17	NA	20424959	20340367	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20341102_20408949_20409046_20424785
transcript_97537.known	chr19	-	1446	3	FSM	ENSG00000231205.12	ENST00000597334.2	1464	3	9	9	0	-4	multi-exon	FALSE	canonical	3	430	junction_1	34	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATATGTTGAAGAAT	-11	True	NA	-14	True	AATAAA	-17	NA	20424969	20404966	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20406133_20408949_20409046_20424785
transcript_97540.known	chr19	-	636	3	FSM	ENSG00000231205.12	ENST00000596724.2	922	3	2	284	0	-284	multi-exon	FALSE	canonical	3	21	junction_1	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAGTAGCTATAAAGTA	2	True	NA	NA	False	NA	NA	NA	20424956	20415304	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20415652_20417665_20417784_20424785
transcript_97542.nnic	chr19	+	3018	2	Antisense	novelGene_ENSG00000231205.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1256	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCCCCTCCTCATGGC	4307	False	NA	-59	True	TATAAA	-7	NA	20362469	20371870	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_20362795_20369177
transcript_97544.nnic	chr19	+	3101	2	Antisense	novelGene_ENSG00000231205.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1256	junction_1	0	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAAGTGTGGCGTTTTC	4307	False	NA	24	True	AATAAA	-15	NA	20362469	20371953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_20362795_20369177
transcript_97548.known	chr19	-	1123	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	27.4752413799932	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAATGGATTTATTT	-15	True	NA	-7	True	AATATA	-16	NA	20661596	20644701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
transcript_97553.known	chr19	+	4539	4	FSM	ENSG00000160229.13	ENST00000344519.10	4539	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	12.1928941054479	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATGGAAAACAAACAAAA	2	True	NA	NA	False	AATAAA	-24	NA	20776303	20809995	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20805826
transcript_97557.known	chr19	+	1531	4	FSM	ENSG00000105750.15	ENST00000300540.7	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	27.3130005674953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTTATTTGACTCTA	-17	True	NA	13	True	AATAAA	-21	NA	20923275	20943977	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20942800
transcript_97559.known	chr19	+	1259	4	FSM	ENSG00000105750.15	ENST00000596476.1	1259	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.0689515339624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCACTTTTGTCAATA	17	False	NA	NA	False	ATTAAA	-45	NA	20923309	20943726	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20923417_20934023_20934151_20934948_20935048_20942800
transcript_97560.known	chr19	+	3886	5	FSM	ENSG00000118620.13	ENST00000261560.10	3886	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	7.66077672302228	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGTTATGTGTGGTTA	-1	True	NA	8	True	AATAAA	-20	NA	21020656	21060050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21056630
transcript_97567.known	chr19	+	8752	5	FSM	ENSG00000160352.16	ENST00000456283.7	8752	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	17.3637553541853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	0	True	NA	NA	False	NA	NA	NA	21082202	21125094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806
transcript_97568.known	chr19	+	2066	5	FSM	ENSG00000160352.16	ENST00000620627.1	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	21.9815263346293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTGGAACGAAACC	15	False	NA	NA	False	AAAAAG	-9	NA	21082249	21118477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828
transcript_97575.known	chr19	+	647	4	FSM	ENSG00000160352.16	ENST00000618008.4	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.0765799460496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAAACCTTTCAAATG	0	True	NA	NA	False	CATAAA	-37	NA	21082202	21117084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21098184_21098312_21098814_21098911_21116806
transcript_97577.nic	chr19	+	1127	3	NIC	ENSG00000160352.16	novel	898	2	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	40	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	17	False	NA	14	True	AATAAA	-14	NA	21082161	21091758	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_21082349_21083977_21084070_21090910
transcript_97578.nic	chr19	+	1069	3	ISM	ENSG00000160352.16	ENST00000620627.1	2066	5	-88	19503	3	7216	intron_retention	FALSE	canonical	3	88	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	17	False	NA	NA	False	NA	NA	NA	21082161	21098974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_21082349_21083977_21084070_21098184
transcript_97581.known	chr19	+	2671	6	FSM	ENSG00000160352.16	ENST00000610902.4	2671	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	17.2904597972408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	6	True	NA	NA	False	NA	NA	NA	21082208	21125094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806_21118886_21124960
transcript_97582.known	chr19	+	2696	7	FSM	ENSG00000160352.16	ENST00000613286.4	2696	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	37.9297596441985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	0	True	NA	NA	False	NA	NA	NA	21082202	21125094	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21109622_21109645_21116806_21118886_21124960
transcript_97586.known	chr19	+	2442	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	129.44014060561	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	NA	False	NA	6	True	ATTAAA	-10	NA	21358929	21379300	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
transcript_97588.known	chr19	+	1142	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	88.4911718760691	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	-5	True	NA	8	True	ATTAAA	-12	NA	21358991	21379302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
transcript_97590.known	chr19	+	6177	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	162.699685002768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	3	True	NA	15	True	AATAAA	-25	NA	21358999	21388582	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
transcript_97597.known	chr19	+	747	5	FSM	ENSG00000172687.14	ENST00000597810.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	162.699685002768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTTTTAATATGATTT	14	True	NA	NA	False	AAGAAA	-38	NA	21359010	21378310	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378012
transcript_97599.known	chr19	-	1916	5	FSM	ENSG00000268119.7	ENST00000597444.6	1916	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	74.4546842045549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTCCCACTCACAATT	7	True	NA	NA	False	NA	NA	NA	21463886	21448050	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21449378_21453549_21453778_21454382_21454473_21456460_21456589_21463743
transcript_97602.known	chr19	-	967	5	FSM	ENSG00000268119.7	ENST00000600469.7	1443	5	31	445	11	-288	multi-exon	FALSE	canonical	3	11	junction_1	76.1950621759704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTTATTATGCCACAAAC	20	True	NA	NA	False	NA	NA	NA	21463873	21452888	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21453280_21453549_21453778_21454382_21454473_21456460_21456589_21463743
transcript_97603.nnic	chr19	-	1543	4	NNC	ENSG00000268119.7	novel	803	3	NA	NA	2	1266	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	84.5024654472677	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTAAAATAGAGCTCTTG	-9	True	NA	NA	False	AATAAA	-25	NA	21463902	21442974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_21444141_21454382_21454473_21456460_21456589_21463743
transcript_97604.known	chr19	-	566	4	FSM	ENSG00000268119.7	ENST00000596705.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.6672862432126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCAGCTCCTGACCGCG	-15	True	NA	NA	False	NA	NA	NA	21463908	21444240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21444424_21454382_21454473_21456460_21456589_21463743
transcript_97606.nnic	chr19	-	2551	4	NNC	ENSG00000268119.7	novel	803	3	NA	NA	0	-1385	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	84.5024654472677	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTGTTTTCGGTAA	-11	True	NA	NA	False	AAAAAG	-6	NA	21463904	21445625	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_21447798_21454382_21454473_21456460_21456589_21463743
transcript_97611.known	chr19	-	1581	4	FSM	ENSG00000268119.7	ENST00000599993.7	1736	4	12	143	1	33	multi-exon	FALSE	canonical	3	81	junction_1	51.7322164827897	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTATGTTTTATAATCC	-3	True	NA	NA	False	NA	NA	NA	21463896	21452567	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21453778_21454382_21454473_21456460_21456589_21463743
transcript_97615.known	chr19	+	375	3	FSM	ENSG00000197013.11	ENST00000598747.1	375	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTGCAAGACTGTCTA	33	False	NA	6	True	AATAAA	-20	NA	21505640	21507664	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21505775_21505984_21506081_21507519
transcript_97616.known	chr19	+	681	3	FSM	ENSG00000197013.11	ENST00000596237.5	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAGAAAGATATATATA	-4	True	NA	NA	False	NA	NA	NA	21505603	21518988	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21505775_21505984_21506081_21518574
transcript_97617.known	chr19	-	803	3	FSM	ENSG00000268119.7	ENST00000663704.1	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCATTCAACTCTGAA	5	True	NA	NA	False	AATACA	-22	NA	21463888	21453942	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21454473_21456460_21456589_21463743
transcript_97622.known	chr19	-	4690	2	FSM	ENSG00000268119.7	ENST00000594557.1	4690	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTACAAAACATTACTGA	9	True	NA	NA	False	NA	NA	NA	21463884	21452039	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21456589_21463743
transcript_97625.known	chr19	+	1769	1	FSM	ENSG00000196268.12	ENST00000599461.1	1769	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAACAACAAGAACAAAA	-2	True	NA	NA	False	AAAAAG	-37	NA	21397165	21398934	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21397200_21398900
transcript_97626.known	chr19	+	1536	4	FSM	ENSG00000196268.12	ENST00000594390.5	1536	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.42809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	6	True	NA	52	True	AATAAA	-15	NA	21397132	21414643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21413465
transcript_97629.known	chr19	-	5235	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	54.3507129668048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTATATATTTTTCTT	-1	True	NA	-22	True	AATAAA	-29	NA	21836182	21804945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
transcript_97630.known	chr19	-	447	3	FSM	ENSG00000198521.12	ENST00000596899.1	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	79.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGGATGAGTGTAAGG	NA	False	NA	NA	False	TATAAA	-42	NA	21852125	21809680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21809808_21817887_21817987_21851904
transcript_97635.known	chr19	+	581	4	FSM	ENSG00000267886.1	ENST00000594318.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTCAGAAGCCGTGG	-22	True	NA	NA	False	NA	NA	NA	23075200	23095616	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23075388_23095011_23095155_23095262_23095441_23095543
transcript_97636.known	chr19	+	464	3	FSM	ENSG00000183850.14	ENST00000593635.1	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	44	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	-13	True	NA	NA	False	AATACA	-45	NA	23075209	23136106	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23075388_23134079_23134207_23135947
transcript_97637.known	chr19	+	563	3	FSM	ENSG00000267886.1	ENST00000600223.1	563	3	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTAGGAAAATGAGGAA	-12	True	NA	NA	False	AATAGA	-20	NA	23075210	23100361	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23075388_23098339_23098414_23100049
transcript_9764.known	chr1	-	3080	17	FSM	ENSG00000085840.13	ENST00000371566.1	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_16	64.1209489461128	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	81	False	NA	-3	True	ATTAAA	-17	NA	52404387	52372830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402226_52404245
transcript_97640.known	chr19	-	556	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	18.6731759484026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-20	True	NA	-45	True	NA	NA	NA	23274244	23260000	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
transcript_97643.known	chr19	-	583	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	18.4089350286454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTTGTCCTATG	-27	True	NA	50	True	NA	NA	NA	23274251	23259905	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
transcript_97645.known	chr19	-	561	4	FSM	ENSG00000284428.1	ENST00000640517.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	21.2759645296439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTTTTCTTTG	-8	True	NA	NA	False	NA	NA	NA	23274232	23260730	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260935_23261619_23261745_23270217_23270293_23274075
transcript_97649.known	chr19	-	574	3	FSM	ENSG00000284428.1	ENST00000638822.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCGCAACCTCCGCCT	-24	True	NA	NA	False	NA	NA	NA	23274248	23260658	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260935_23261619_23261745_23274075
transcript_97652.known	chr19	-	579	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23	True	NA	-1	True	AATAAA	-19	NA	23274247	23269885	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23270293_23274075
transcript_9766.nnic	chr1	-	3063	16	NIC	ENSG00000085840.13	novel	3121	17	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	69.0949748936604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	NA	False	NA	-3	True	ATTAAA	-17	NA	52404475	52372830	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
transcript_97662.nnic	chr19	-	797	7	NNC	ENSG00000269416.7	novel	798	6	NA	NA	-24	-79	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	44.010415433925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	NA	False	NA	NA	False	AAAAAG	-8	NA	23416099	23403358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_23403494_23403719_23403748_23404476_23404563_23404740_23404847_23404950_23405109_23405257_23405336_23415893
transcript_97669.known	chr19	-	798	6	FSM	ENSG00000269416.7	ENST00000593573.5	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	42.7523098791165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAAATAGGATTGTGCC	-6	True	NA	NA	False	NA	NA	NA	23416059	23400983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23401048_23403205_23403510_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_97678.nic	chr19	-	553	5	NIC	ENSG00000269416.7	novel	798	6	NA	NA	0	-79	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	41.0030486671418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	6	True	NA	NA	False	AAAAAG	-8	NA	23416047	23403358	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_23403494_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_97681.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601293.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	63.8957484240279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCACAAATAGGATTGT	-22	True	NA	NA	False	NA	NA	NA	23416075	23400986	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23415893
transcript_97683.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601338.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	56.8741300299764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGGTGAGTTGGTGACA	-21	True	NA	NA	False	NA	NA	NA	23416074	23403211	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23403494_23403719_23403748_23405257_23405336_23415903
transcript_97687.known	chr19	-	572	3	FSM	ENSG00000269416.7	ENST00000598922.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	58	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCTGGGCCCAGCAA	-12	True	NA	NA	False	NA	NA	NA	23416065	23402416	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23402513_23403205_23403510_23415893
transcript_97688.known	chr19	-	485	4	FSM	ENSG00000269416.7	ENST00000596763.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	22.553639765383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCCCAGGTGATGTGA	6	True	NA	NA	False	NA	NA	NA	23416047	23404751	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23404847_23404950_23405109_23405257_23405336_23415893
transcript_97689.known	chr19	-	2311	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	0	True	NA	96	True	CATAAA	-22	NA	23687212	23652800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
transcript_97692.nnic	chr19	+	1421	4	FSM	ENSG00000288920.1	ENST00000484897.4	2140	4	-14	733	5	-733	multi-exon	FALSE	canonical	3	24	junction_3	40.7948798530186	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATAATTATGAGTC	-9	True	NA	6	True	AATAAA	-32	NA	23762989	23828135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069
transcript_97693.known	chr19	+	1001	4	FSM	ENSG00000288920.1	ENST00000471224.5	1001	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	23.8374122383748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	23762943	23832196	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23831596
transcript_97696.known	chr19	+	1995	6	FSM	ENSG00000268362.6	ENST00000666101.1	1995	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	32.8475265431052	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCCAGGTGTGGTGATT	3	True	NA	NA	False	AATAAA	-10	NA	24033407	24066749	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24033622_24046183_24046280_24048936_24049015_24049404_24049549_24057930_24058107_24065462
transcript_97699.known	chr19	+	4244	5	FSM	ENSG00000213096.11	ENST00000613065.4	4244	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	48.1215907883353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	0	True	NA	NA	False	ATTAAA	-34	NA	24033404	24129961	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24033622_24046183_24046280_24105939_24106067_24106547_24106644_24126253
transcript_9770.known	chr1	-	2910	21	FSM	ENSG00000134744.14	ENST00000484723.6	2910	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_20	75.702889641017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCTTTGGCTGGGACTG	-13	True	NA	NA	False	AAAAAG	-38	NA	52553458	52446399	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52446443_52446589_52446668_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52552930_52553091_52553432
transcript_97700.known	chr19	+	4089	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	40.5490101262931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTAAGTATGTTTG	-6	True	NA	NA	False	AATAAA	-1	NA	24087186	24129968	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
transcript_97701.known	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	27.5533573271934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	15	True	NA	-2	True	AATAAA	-27	NA	27793900	27721701	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_97702.known	chr19	-	3429	5	FSM	ENSG00000261824.8	ENST00000657659.2	3517	5	88	0	8	0	multi-exon	FALSE	canonical	3	33	junction_1	18.4983107336859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACTACTTATGAA	81	False	NA	NA	False	AATAAA	-12	NA	27793834	27728229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_97704.known	chr19	-	3731	4	FSM	ENSG00000261824.8	ENST00000661680.2	4262	4	531	0	-3	0	multi-exon	TRUE	canonical	3	33	junction_1	20.7257220756131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-8	True	NA	NA	False	NA	NA	NA	27793391	27727783	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999
transcript_97706.known	chr19	-	4005	6	FSM	ENSG00000261824.8	ENST00000666734.1	4005	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.8059694844264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATATCTTGCAATAA	NA	False	NA	NA	False	NA	NA	NA	27793996	27728261	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27771543_27771990_27792999_27793233_27793531
transcript_97709.known	chr19	-	4506	5	FSM	ENSG00000261824.8	ENST00000665874.1	4506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	27.617928959283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAATGCTTTATGATG	-23	True	NA	NA	False	AAGAAA	-19	NA	27793938	27727881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27771663_27771990_27792999
transcript_9771.known	chr1	-	539	3	FSM	ENSG00000134744.14	ENST00000524582.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCTTCCAGGTCCTAA	-42	True	NA	NA	False	AGTAAA	-5	NA	52553487	52526049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52526374_52552930_52553091_52553432
transcript_97710.known	chr19	-	1637	2	FSM	ENSG00000261824.8	ENST00000653404.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTTATCTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	27793991	27792055	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27793233_27793531
transcript_97712.known	chr19	-	1999	3	FSM	ENSG00000261824.8	ENST00000590523.2	1999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATCTTTCTTTTTTTTT	24	True	NA	NA	False	AATAAA	-20	NA	27793891	27790492	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27791902_27792999_27793230_27793531
transcript_97713.known	chr19	+	1759	3	FSM	ENSG00000267575.8	ENST00000659857.2	1764	3	5	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	-25	True	NA	NA	False	AATAAA	-21	NA	27793451	27806782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793610_27797753_27798177_27805604
transcript_97717.known	chr19	+	1824	3	FSM	ENSG00000267575.8	ENST00000585917.6	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGCTTGTAATTT	8379	False	NA	NA	False	AATAAA	-24	NA	27793430	27806785	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793651_27797753_27798177_27805604
transcript_97718.known	chr19	+	1829	3	FSM	ENSG00000267575.8	ENST00000669503.1	1829	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	377	False	NA	NA	False	AATAAA	-21	NA	27793894	27806782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27794123_27797753_27798177_27805604
transcript_97721.known	chr19	+	2401	1	FSM	ENSG00000267575.8	ENST00000588784.1	2401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTTAAAACTAAC	-7	True	NA	NA	False	NA	NA	NA	27794023	27796424	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27794000_27796400
transcript_97722.known	chr19	+	1904	2	FSM	ENSG00000267575.8	ENST00000669826.1	1904	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTCAAAGTGTTAATTT	-7	True	NA	NA	False	AATAAA	-28	NA	27794023	27796486	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27794123_27794681
transcript_97723.known	chr19	+	1335	2	FSM	ENSG00000267575.8	ENST00000590628.1	1335	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	17	True	NA	NA	False	AATAAA	-21	NA	27793493	27806782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793651_27805604
transcript_97724.known	chr19	+	656	2	FSM	ENSG00000267575.8	ENST00000586784.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	27793482	27798282	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793610_27797753
transcript_97738.nnic	chr19	-	997	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-36	-2068	at_least_one_novel_splicesite	FALSE	non_canonical	2	29	junction_2	1631.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	13	False	NA	-69	True	AATAAA	-18	NA	29213187	29207387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_97739.known	chr19	-	3086	2	FSM	ENSG00000169021.6	ENST00000304863.6	3086	2	0	0	0	0	multi-exon	FALSE	canonical	3	3292	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTCGTTTGAATTT	-7	True	NA	NA	False	ACTAAA	-15	NA	29213151	29205319	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29208159_29212904
transcript_97741.known	chr19	+	1488	5	FSM	ENSG00000187135.8	ENST00000335523.8	2065	5	505	72	505	-72	multi-exon	FALSE	canonical	2	2	junction_2	1.78535710713571	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGACACTTGTTTATAAA	45	False	NA	NA	False	AATAAA	-14	NA	29526498	29564479	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29526666_29527210_29527396_29528432_29528463_29529818_29530291_29563845
transcript_97745.known	chr19	+	846	7	FSM	ENSG00000105171.10	ENST00000591824.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	88.2685296882945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTAAGCCAATTCCATT	13	True	NA	NA	False	NA	NA	NA	29606302	29615458	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29606326_29608656_29608710_29610319_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_97746.known	chr19	+	2556	7	FSM	ENSG00000105171.10	ENST00000585603.6	2556	7	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_1	37.9154761717868	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	-7	True	NA	21	True	AATACA	-19	NA	29606282	29617237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29606326_29608656_29608710_29610408_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_9775.known	chr1	+	5233	10	FSM	ENSG00000134748.13	ENST00000257181.10	5233	10	0	0	0	0	multi-exon	TRUE	canonical	3	384	junction_3	28.4752437421146	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGTTGGGAGTTAAAA	-5	True	NA	NA	False	AATAAA	-26	NA	52404601	52420836	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52404880_52405679_52405840_52408568_52408691_52411114_52411201_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_97750.known	chr19	+	2321	6	FSM	ENSG00000105171.10	ENST00000221770.7	2321	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	84.5444261912044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	4	True	NA	21	True	AATACA	-19	NA	29606293	29617237	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29606326_29608656_29608710_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_97753.nnic	chr19	+	2042	3	NNC	ENSG00000166289.6	novel	1699	2	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	NA	False	NA	33	True	AATAAA	-36	NA	29665404	29675477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_29665506_29666893_29667181_29673823
transcript_97755.known	chr19	+	1699	2	FSM	ENSG00000166289.6	ENST00000436066.4	1699	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	1	True	NA	33	True	AATAAA	-36	NA	29665460	29675477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29665506_29673823
transcript_97756.known	chr19	+	1357	2	FSM	ENSG00000166289.6	ENST00000592810.1	1357	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTATGGCTTCACT	-1	True	NA	NA	False	NA	NA	NA	29665458	29674843	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29665796_29673823
transcript_97757.known	chr19	+	707	2	FSM	ENSG00000166289.6	ENST00000586888.1	707	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGCGGCGGCAACTGAG	1375	False	NA	NA	False	NA	NA	NA	29666873	29674223	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29667181_29673823
transcript_97758.known	chr19	+	543	2	FSM	ENSG00000166289.6	ENST00000588833.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGTCACACTGGAGCT	2	True	NA	NA	False	NA	NA	NA	29665500	29674085	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29665782_29673823
transcript_97759.known	chr19	-	578	4	FSM	ENSG00000131943.20	ENST00000342680.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	21.4527905462721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGACGGACGCCGTGC	-19	True	NA	NA	False	NA	NA	NA	29715275	29702841	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29705273_29705395_29708253_29708424_29715124
transcript_97760.known	chr19	-	4265	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	0	-539	0	-100	multi-exon	FALSE	canonical	3	4	junction_2	23.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	455	False	NA	-5	True	NA	NA	NA	29715060	29699036	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29708253_29708424_29714906
transcript_97761.known	chr19	-	4348	3	FSM	ENSG00000131943.20	ENST00000323670.14	4348	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	2.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTGGGATTCATT	-5	True	NA	95	True	NA	NA	NA	29715261	29698936	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29708253_29708424_29715124
transcript_97762.known	chr19	-	1912	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTCCCACATATTAT	294	False	NA	-15	True	AATAAA	-15	NA	29715221	29701162	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29715124
transcript_97763.known	chr19	+	1954	12	FSM	ENSG00000105173.14	ENST00000262643.8	1954	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	48.786090688106	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTTTATGAGCTATGT	10	True	NA	21	True	AATAAA	-22	NA	29811990	29824312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29812153_29812531_29812579_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
transcript_97766.nnic	chr19	+	1909	11	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	100.58434271794	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	4	True	NA	17	True	AATAAA	-18	NA	29811984	29824308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_29812153_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
transcript_97771.known	chr19	+	1641	9	FSM	ENSG00000105173.14	ENST00000357943.9	1641	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	106.307263980407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	7	False	NA	17	True	AATAAA	-18	NA	29812653	29824308	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29822239_29822352_29822445_29822604_29823654
transcript_97775.known	chr19	-	5065	2	FSM	ENSG00000121297.8	ENST00000240587.5	5065	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTGCGTTCACAAT	4	True	NA	0	True	ATTAAA	-19	NA	31349436	31274944	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_31279753_31349179
transcript_97778.known	chr19	+	7716	7	FSM	ENSG00000168813.17	ENST00000355898.6	7716	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	8.80814017448254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	-10	True	NA	NA	False	AATAAA	-13	NA	32345609	32387667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_97780.known	chr19	+	7638	6	FSM	ENSG00000168813.17	ENST00000311921.8	7638	6	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	30.6920185064456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	-26	True	NA	NA	False	AATAAA	-13	NA	32345593	32387667	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32345784_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_97781.known	chr19	+	5560	4	FSM	ENSG00000168813.17	ENST00000587084.5	5560	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	4.08248290463863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGCGGCCGCTTTT	5	True	NA	NA	False	NA	NA	NA	32345624	32359793	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615
transcript_97785.nnic	chr19	-	1064	4	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-23	-2	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_3	6.59966329107444	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGCTGTACTTTTTCT	NA	False	NA	-2	True	AATAAA	-22	NA	32405583	32390051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_32390334_32391115_32391187_32399750_32399869_32404990
transcript_97788.known	chr19	-	972	3	FSM	ENSG00000267213.4	ENST00000592680.2	972	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	NA	False	NA	0	True	AATAAA	-24	NA	32405560	32390049	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32390334_32399750_32399869_32404990
transcript_97789.known	chr19	+	558	6	FSM	ENSG00000105185.12	ENST00000221784.8	558	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	798.140188187514	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	-14	True	NA	16	True	AATAAA	-20	NA	32581201	32587425	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32581328_32582194_32582233_32584954_32585012_32585815_32585908_32586857_32586930_32587252
transcript_9779.known	chr1	+	1059	8	FSM	ENSG00000134748.13	ENST00000474048.1	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	147.989381858487	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGTAGTTTAGTTTTT	21	False	NA	33	True	ATTAAA	-22	NA	52404627	52417022	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52404880_52405679_52405714_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_97793.known	chr19	+	468	5	FSM	ENSG00000105185.12	ENST00000592786.5	468	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	853.497913002721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGGCCAGATCTGT	16	True	NA	43	True	AATAAA	-29	NA	32581231	32587452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32586857_32586930_32587252
transcript_97795.known	chr19	+	1799	4	FSM	ENSG00000105185.12	ENST00000419343.7	1799	4	0	0	0	0	multi-exon	FALSE	canonical	3	1845	junction_1	97.5602378020882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCTTTTAAAAAAATAAAC	-15	True	NA	-22	True	NA	NA	NA	32581200	32587387	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815
transcript_97799.known	chr19	-	4432	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_13	22.0923386849701	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATGGTATTTTTTT	-7	True	NA	-12	True	AGTAAA	-16	NA	32675180	32597005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_97815.known	chr19	-	5673	19	FSM	ENSG00000121289.18	ENST00000305768.10	5673	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.1369334592098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTCCTGAGTGTTT	-8	True	NA	-13	True	ATTAAA	-17	NA	32971958	32875924	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_9782.known	chr1	+	1229	3	FSM	ENSG00000116157.6	ENST00000361314.5	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	2.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATAGTCTCCCTCCC	-11	True	NA	11	True	AATAAA	-20	NA	52602370	52609051	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52602548_52606683_52606946_52608261
transcript_97822.known	chr19	-	1340	9	FSM	ENSG00000121289.18	ENST00000590597.6	1340	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	10.8021988502342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACAAAGTAAAAGAGGC	-13	True	NA	NA	False	AATAAA	-38	NA	32971963	32931206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_97831.known	chr19	-	558	2	FSM	ENSG00000121289.18	ENST00000592401.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCACACCCCGGCCTCC	34	True	NA	NA	False	NA	NA	NA	32971916	32971172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32971650_32971835
transcript_97832.known	chr19	-	2903	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-41	False	NA	-1	True	AATAAA	-19	NA	32971991	32968908	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32971656_32971835
transcript_97833.known	chr19	+	2313	5	FSM	ENSG00000131944.10	ENST00000588258.6	2313	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	6.10327780786685	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATTAGCCAGGCA	-18	True	NA	NA	False	NA	NA	NA	32972241	32978229	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32972347_32973183_32973303_32973425_32973563_32974059_32974213_32976430
transcript_97835.known	chr19	+	875	5	FSM	ENSG00000131944.10	ENST00000254262.9	875	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.5887763261791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGGATCATCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	32972208	32976816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32972347_32973183_32973303_32973483_32973563_32974059_32974213_32976430
transcript_97836.known	chr19	+	784	3	FSM	ENSG00000131944.10	ENST00000590179.1	784	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGCAGTGAGCTGAGAT	0	True	NA	NA	False	NA	NA	NA	32972259	32976974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32972347_32974059_32974213_32976430
transcript_97837.known	chr19	-	3501	15	FSM	ENSG00000131941.8	ENST00000254260.8	3501	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	11.1586426648786	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTCTTTTTACTT	-4	True	NA	-6	True	AATAAA	-18	NA	33064888	32978591	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32980257_32990513_32990670_32991822_32991970_32993976_32994054_32996025_32996221_32999585_32999706_33002246_33002404_33002812_33003001_33008013_33008181_33011678_33011804_33012646_33012725_33021570_33021647_33026503_33026633_33044248_33044365_33064783
transcript_9784.nnic	chr1	+	535	3	NNC	ENSG00000182183.15	novel	924	3	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTGGAGTCTCTTC	840	False	NA	4	True	AATAAA	-14	NA	52632920	52657065	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_52633040_52642862_52643003_52656789
transcript_97840.known	chr19	-	2378	14	FSM	ENSG00000131941.8	ENST00000588388.5	2378	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	20.707315118293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGGTTTGGCTAATAAT	-4	True	NA	NA	False	ATTAAA	-36	NA	33064888	32979638	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32980257_32990513_32990670_32991822_32991970_32993976_32994054_32996025_32996221_32999585_32999706_33002246_33002404_33002812_33003001_33008013_33008181_33011678_33011804_33012646_33012725_33026503_33026633_33044248_33044365_33064783
transcript_97847.known	chr19	+	3191	20	FSM	ENSG00000076650.7	ENST00000170564.7	3191	20	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_13	9.73271605323268	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCGTTTTTTGGGA	-5	True	NA	NA	False	NA	NA	NA	33081180	33130542	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587_33126734_33130129
transcript_9785.known	chr1	-	3988	3	FSM	ENSG00000162377.6	ENST00000371538.5	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	19.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGCCTCATATCCCA	-3	True	NA	-15	True	ATTAAA	-8	NA	52698347	52684448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52688169_52692726_52692868_52698220
transcript_97854.known	chr19	-	1946	11	FSM	ENSG00000130876.11	ENST00000253188.8	1946	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	3.9496835316263	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGCTATGGGGAGTCC	-2	True	NA	-7	True	AATAAA	-16	NA	33225850	33208663	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33209022_33209307_33209486_33210466_33210617_33210801_33210899_33211224_33211329_33211413_33211538_33212291_33212446_33212513_33212640_33212850_33213003_33215768_33215974_33225552
transcript_9786.known	chr1	-	908	3	FSM	ENSG00000162377.6	ENST00000486918.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	135.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAGCCTACAATGTTT	276	False	NA	-55	True	NA	NA	NA	52698068	52687561	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52688169_52692726_52692868_52697908
transcript_97864.nic	chr19	-	1982	10	NIC	ENSG00000130876.11	novel	1946	11	NA	NA	-80	0	intron_retention	FALSE	canonical	3	14	junction_9	3.77450838921401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGAAGCCTGTTTAAG	NA	False	NA	-28	True	AAAAAG	-44	NA	33225930	33208775	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_33209022_33209307_33209486_33210466_33210617_33210801_33210899_33211224_33211329_33211413_33211538_33212291_33212640_33212850_33213003_33215768_33215974_33225552
transcript_97866.known	chr19	-	1641	10	FSM	ENSG00000130876.11	ENST00000590036.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.31816613336672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTTCT	0	True	NA	-72	True	NA	NA	NA	33225798	33208819	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33209022_33209307_33209486_33210466_33210617_33211224_33211329_33211413_33211538_33212291_33212446_33212513_33212640_33212850_33213003_33215768_33215974_33225552
transcript_97878.known	chr19	+	4058	7	FSM	ENSG00000130881.14	ENST00000253193.9	4058	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	32.4328365840685	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTCAGTCTCTACA	-7	True	NA	13	True	AATAAA	-18	NA	33194329	33208864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33194859_33196729_33196778_33202847_33202987_33204637_33204853_33205245_33206363_33206600_33206734_33206987
transcript_97886.known	chr19	+	2198	1	FSM	ENSG00000267296.2	ENST00000592982.2	2198	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGGTAGGGTCCTAATT	25	True	NA	3	True	ATTAAA	-14	NA	33302856	33305054	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33302900_33305100
transcript_97887.known	chr19	+	3730	2	FSM	ENSG00000153879.9	ENST00000284000.9	3730	2	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTTCATCGTGGCTT	-52	True	NA	18	True	AATAAA	-21	NA	33373708	33382686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33373896_33379143
transcript_97888.known	chr19	-	1804	16	FSM	ENSG00000124299.15	ENST00000651901.1	1804	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	260.314032575187	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATGATTGAAAATAAT	27	False	NA	-25	True	ATTAAA	-9	NA	33521756	33387107	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387654_33387745_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_97893.known	chr19	-	1929	16	FSM	ENSG00000124299.15	ENST00000588328.6	1929	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	268.09699737222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTGCGTGGCTTCCC	34	False	NA	-3	True	AATAAA	-17	NA	33521749	33386951	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33396089_33396156_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_97897.known	chr19	-	1907	15	FSM	ENSG00000124299.15	ENST00000244137.12	1907	15	0	0	0	0	multi-exon	TRUE	canonical	3	668	junction_14	58.0550407380965	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCGTGGCTTCCCCT	-8	True	NA	-1	True	AATAAA	-19	NA	33521791	33386949	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_97905.known	chr19	-	1638	13	FSM	ENSG00000124299.15	ENST00000436370.7	1638	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	213.954174740501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTCTGATACTTTCTG	-5	True	NA	59	True	ACTAAA	-42	NA	33521788	33387023	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33512592_33512777_33521743
transcript_97906.known	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_6	217.603040726304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-8	True	NA	-31	True	NA	NA	NA	33521791	33386979	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_97916.known	chr19	-	1020	9	FSM	ENSG00000124299.15	ENST00000651646.1	1020	9	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_8	52.5700425622807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCATTATGTCTGCTG	25	False	NA	NA	False	AGTAAA	-26	NA	33521758	33462643	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_9792.known	chr1	+	8143	14	FSM	ENSG00000162378.13	ENST00000294353.7	8143	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	14.4148181482987	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTGTGTCTTGTCTA	-8	True	NA	14	True	AATAAA	-15	NA	52726452	52827336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52726684_52756457_52756624_52771019_52771775_52779852_52779994_52784876_52785054_52790002_52790068_52796291_52796392_52796733_52796785_52801818_52801981_52802091_52802140_52813535_52813734_52813859_52813913_52816531_52816630_52821438
transcript_97922.known	chr19	+	1040	5	FSM	ENSG00000124302.13	ENST00000591231.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	17.2626765016321	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGTGTCCCGTATCTTC	1	True	NA	NA	False	NA	NA	NA	33621954	33772323	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33622297_33667766_33667844_33689175_33689392_33771412_33771451_33771956
transcript_97927.known	chr19	+	2133	4	FSM	ENSG00000124302.13	ENST00000438847.7	2133	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3.39934634239519	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTGTACTCTGTGGTG	17	False	NA	15	True	AATAAA	-20	NA	33621970	33773509	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33622297_33689175_33689392_33771412_33771451_33771956
transcript_97938.known	chr19	+	3909	7	FSM	ENSG00000153885.15	ENST00000683859.1	3909	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.919978804094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	-2	True	NA	78	True	AATAAA	-22	NA	33796869	33815761	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33796988_33798667_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
transcript_97942.known	chr19	+	1625	7	FSM	ENSG00000153885.15	ENST00000589786.5	1625	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.919978804094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGACCAGCTGCCTGGC	-10	True	NA	NA	False	NA	NA	NA	33796861	33813472	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33796988_33798670_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
transcript_97952.known	chr19	+	2040	1	FSM	ENSG00000277013.1	ENST00000610908.1	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCTTCCTACCAAT	562	False	NA	17	True	AATAAA	-21	NA	33906351	33908391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33906400_33908400
transcript_97954.known	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_10	333.46813940765	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	42	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
transcript_97957.known	chr19	+	3431	10	FSM	ENSG00000257103.9	ENST00000544216.8	3431	10	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_9	165.531541882581	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	-22	True	NA	23	True	AATAAA	-17	NA	34172503	34229288	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
transcript_97963.nic	chr19	+	2086	9	NIC	ENSG00000257103.9	novel	3431	10	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_4	379.416142744349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTGTCCTTGCAGAA	7	False	NA	10	True	AATAAA	-19	NA	34172479	34228096	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
transcript_97968.nic	chr19	+	1187	7	ISM	ENSG00000257103.9	ENST00000544216.8	3431	10	-84	9715	-84	-304	5prime_fragment	TRUE	canonical	3	1044	junction_5	88.3301886232687	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTTGATTTTTCTTT	-1	True	NA	NA	False	AATAAA	-14	NA	34172419	34219573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390
transcript_9797.known	chr1	-	455	1	FSM	ENSG00000228929.1	ENST00000437890.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGTGTACTCAAGC	27	False	NA	NA	False	NA	NA	NA	52772648	52772193	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52772200_52772600
transcript_97970.known	chr19	+	6680	14	FSM	ENSG00000166398.14	ENST00000299505.8	6680	14	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	9.1806330755912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCCTTGTTTAAAA	-14	True	NA	NA	False	ATTAAA	-19	NA	34254553	34355566	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34254615_34299678_34300969_34319906_34320117_34327420_34327562_34327770_34327867_34327989_34328152_34330188_34330348_34333703_34333802_34339866_34339993_34341421_34342456_34347876_34348043_34349015_34349154_34351513_34351593_34352646
transcript_97973.known	chr19	+	632	4	FSM	ENSG00000166398.14	ENST00000588470.5	632	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.0027776813339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAGAAAAAAAGAACAGCG	-16	True	NA	NA	False	NA	NA	NA	34254551	34320016	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34254615_34299678_34299924_34300754_34300969_34319906
transcript_97976.known	chr19	+	4341	19	FSM	ENSG00000105220.17	ENST00000415930.8	4341	19	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	291.290021358799	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	5015	False	NA	31	True	AATAAA	-20	NA	34364739	34402413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34365020_34365259_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_97977.nic	chr19	+	2060	19	NIC	ENSG00000105220.17	novel	4341	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	296.364307009356	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGGCTCAGCCTCTG	-3	True	NA	35	True	AATAAA	-15	NA	34365006	34400328	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34365091_34365259_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_97982.known	chr19	+	4125	18	FSM	ENSG00000105220.17	ENST00000356487.11	4125	18	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_8	116.322068110104	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	5	True	NA	31	True	AATAAA	-20	NA	34365195	34402413	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_97990.known	chr19	+	1157	7	FSM	ENSG00000126249.8	ENST00000246535.4	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	13.5113121330075	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATGTACCTTAT	-10	True	NA	15	True	ATTAAA	-20	NA	34404398	34426168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34404539_34404648_34404816_34404929_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_97991.known	chr19	+	1227	6	FSM	ENSG00000126249.8	ENST00000587385.6	1227	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	14.1788574998129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTTACATCCAAATA	16	True	NA	-3	True	ATTAAA	-2	NA	34404424	34426150	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34404539_34404648_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_97998.nic	chr19	+	2756	18	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	253.726114494489	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	-27	True	NA	27	True	AATAAA	-20	NA	34428362	34469890	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34428571_34430092_34430187_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_98.known	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_2	58	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_8967_9189_9325_9667
transcript_98000.known	chr19	+	4005	17	FSM	ENSG00000126261.13	ENST00000246548.9	4005	17	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	94.4675870338605	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTTCCTTGTGTAAT	-9	True	NA	27	True	ACTAAA	-19	NA	34428380	34471251	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_98014.known	chr19	-	612	3	FSM	ENSG00000268751.2	ENST00000687185.1	712	3	96	4	-36	0	multi-exon	FALSE	canonical	3	19	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	97	False	NA	-5	True	AATAAA	-15	NA	34577701	34576732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34576995_34577265_34577457_34577542
transcript_98017.nic	chr19	+	2647	5	NIC	ENSG00000089335.22	novel	2590	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	91.9493746580149	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	NA	False	NA	24	True	AATAAA	-34	NA	34677637	34686391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34677863_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_98018.known	chr19	+	2600	5	FSM	ENSG00000089335.22	ENST00000457781.6	2600	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	59.9103496901829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGACTGTTTG	11	False	NA	30	True	AATAAA	-40	NA	34677661	34686397	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_98019.known	chr19	+	2853	5	FSM	ENSG00000089335.22	ENST00000505242.6	2853	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	80.5946648358314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	-11	True	NA	29	True	AATAAA	-39	NA	34677677	34686396	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_98020.known	chr19	+	2590	5	FSM	ENSG00000089335.22	ENST00000423823.6	2590	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.6386004807846	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	0	True	NA	24	True	AATAAA	-34	NA	34677688	34686391	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_98021.known	chr19	+	675	5	FSM	ENSG00000089335.22	ENST00000506901.5	675	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	94.2745326161843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	34677653	34684172	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34677863_34678736_34678814_34682776_34682898_34683151_34683239_34683991
transcript_98022.known	chr19	-	540	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGAGAGACAGGGAG	6	True	NA	1	True	ATTAAA	-23	NA	34733837	34733297	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34733300_34733800
transcript_98023.known	chr19	-	948	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	12	True	NA	3	True	AATAAA	-30	NA	34773200	34766967	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34767412_34769428_34769556_34772823
transcript_98025.known	chr19	-	874	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860691	34849047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34849550_34860173_34860303_34860448
transcript_98026.known	chr19	-	847	3	FSM	ENSG00000271109.2	ENST00000653487.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	34860747	34849045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34849550_34860173_34860303_34860533
transcript_98027.known	chr19	-	1046	2	FSM	ENSG00000271109.2	ENST00000655389.1	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	34860715	34849045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34849550_34860173
transcript_98030.known	chr19	+	2583	6	FSM	ENSG00000168661.15	ENST00000601957.5	2583	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.70522184569608	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	23	False	NA	6	True	AATAAA	-20	NA	34926979	34945168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
transcript_98032.known	chr19	+	2579	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.0591997693654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	-14	True	NA	2	True	AATAAA	-16	NA	34926902	34945164	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_98033.known	chr19	+	2580	5	FSM	ENSG00000168661.15	ENST00000601142.2	2580	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	7.82224392358101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	-14	True	NA	6	True	AATAAA	-20	NA	34926902	34945168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34943222
transcript_98034.known	chr19	+	2651	5	FSM	ENSG00000168661.15	ENST00000439785.5	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.4013220313574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTGAACTTCAAATAAT	-14	True	NA	8	True	AATAAA	-22	NA	34926902	34945170	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34927283_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_98035.known	chr19	-	4068	4	FSM	ENSG00000180884.10	ENST00000404801.2	4068	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	3.29983164553722	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTTTCTTTCA	-4	True	NA	-1	True	CATAAA	-15	NA	34964229	34956353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34959572_34960234_34960358_34960867_34960995_34963629
transcript_98044.known	chr19	+	2659	20	FSM	ENSG00000089351.15	ENST00000317991.10	2659	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	311.834479142816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	18	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35022899_35022912_35023235_35023344_35023426_35023548_35026048
transcript_9805.known	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_5	41.3264629893471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	7	True	NA	0	True	AATAAA	-38	NA	52921740	52895909	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_98057.known	chr19	+	2647	19	FSM	ENSG00000089351.15	ENST00000680623.1	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_10	180.87411214556	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	18	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_98079.known	chr19	+	2534	18	FSM	ENSG00000089351.15	ENST00000600231.5	2534	18	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_7	269.598599485032	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	18	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_98082.known	chr19	+	2523	18	FSM	ENSG00000089351.15	ENST00000411896.6	2523	18	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	259.522812032773	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	72	False	NA	13	True	AATAAA	-13	NA	35000425	35026469	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_98118.nic	chr19	+	2296	7	ISM	ENSG00000089351.15	ENST00000317991.10	2659	20	-82	13463	-82	-578	5prime_fragment	FALSE	canonical	3	796	junction_6	79.9557169104665	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAACATTCTCTGGCCAG	301	False	NA	NA	False	TATAAA	-6	NA	35000240	35013006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473
transcript_98121.known	chr19	+	808	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_5	54.1649333055991	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	9	False	NA	28	True	AGTAAA	-25	NA	35000455	35010639	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_9813.known	chr1	-	1126	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	29.0492577357839	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCTGAGTCTTGGTAT	21	True	NA	-29	True	ATTAAA	-5	NA	52921726	52896232	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_98132.known	chr19	+	1666	6	FSM	ENSG00000105711.14	ENST00000262631.11	1666	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.92574776766556	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATAGTTTCGATTGTGAG	5	True	NA	16	True	AATAAA	-16	NA	35030469	35040449	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35030861_35032527_35032695_35033498_35033740_35039116_35039259_35039634_35039707_35039796
transcript_98135.known	chr19	+	1746	13	FSM	ENSG00000105707.15	ENST00000672452.2	1746	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	16.5445526449712	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-20	True	NA	21	True	AATAAA	-16	NA	35041720	35066573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35041873_35042452_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_98141.nic	chr19	+	1911	13	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_1	32.4623713791146	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	1315	False	NA	21	True	AATAAA	-16	NA	35041700	35066573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_35041873_35042307_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_98150.known	chr19	+	2323	12	FSM	ENSG00000105707.15	ENST00000673426.1	2323	12	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	11.6015103035042	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGCCTCCGAGCTTAC	-19	True	NA	19	True	AATAAA	-14	NA	35041721	35066571	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_98155.nnic	chr19	+	1683	12	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	32.2830969255962	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-27	True	NA	21	True	AATAAA	-16	NA	35041713	35066573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_35041873_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_9818.known	chr1	-	2645	8	FSM	ENSG00000121310.17	ENST00000460612.5	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	42.7417494126895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	-15	True	NA	-19	True	ATTAAA	-15	NA	52921762	52896222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_98189.known	chr19	+	708	6	FSM	ENSG00000221946.8	ENST00000270310.7	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	14.3666279968544	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGTGTGTTCTCAT	-17	True	NA	24	True	AATAAA	-24	NA	35143254	35154302	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35143365_35148693_35148724_35151253_35151329_35151439_35151483_35151632_35151674_35153893
transcript_9819.nic	chr1	-	1115	8	NIC	ENSG00000121310.17	novel	1126	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	41.0634153673638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-24	True	NA	-28	True	ATTAAA	-6	NA	52921771	52896231	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_98192.known	chr19	+	512	7	FSM	ENSG00000266964.6	ENST00000589121.1	512	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	89.8914468802356	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTGTCGGTCTCGGTC	43	False	NA	23	True	AATAAA	-20	NA	35140104	35143052	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35140141_35140596_35140630_35141131_35141207_35141442_35141573_35142471_35142522_35142719_35142772_35142916
transcript_98195.known	chr19	-	2673	9	FSM	ENSG00000153902.14	ENST00000310123.8	2673	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.44629822384762	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-20	True	NA	-3	True	AATAAA	-17	NA	35135059	35124512	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
transcript_98196.known	chr19	+	878	9	FSM	ENSG00000089327.15	ENST00000392219.7	878	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	60.5160102782726	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGATCTCTGATCATTT	-14	True	NA	17	True	AGTAAA	-17	NA	35154734	35169881	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35154810_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_98197.known	chr19	+	898	9	FSM	ENSG00000089327.15	ENST00000541435.6	898	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	227.305273805955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCACTGTGGTCTTT	4	True	NA	-5	True	GGGGCT	-34	NA	35154752	35169859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35154870_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_98219.known	chr19	+	1963	8	FSM	ENSG00000105699.17	ENST00000360798.7	1963	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	494.473374781036	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGGAGAGAACCATT	15	True	NA	25	True	AATAAA	-13	NA	35248764	35267962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_98220.known	chr19	+	2105	9	FSM	ENSG00000105699.17	ENST00000354900.7	2105	9	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_3	245.166493173517	3504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAGAGAACCATTTG	22	False	NA	27	True	AATAAA	-15	NA	35248771	35267964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_98221.known	chr19	+	1932	10	FSM	ENSG00000105699.17	ENST00000605618.6	1932	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_4	509.800493536321	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAGAGAACCATTTG	-4	True	NA	27	True	AATAAA	-15	NA	35249001	35267964	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35261924_35261982_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_98222.known	chr19	+	1606	7	FSM	ENSG00000105699.17	ENST00000427250.5	1606	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	609.0214601218	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGGAGAGAACCATT	-4	True	NA	25	True	AATAAA	-13	NA	35249001	35267962	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_98223.known	chr19	+	1612	10	FSM	ENSG00000105698.16	ENST00000595068.5	1612	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	36.2801173314013	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTGCTTGTGTGTTT	110	False	NA	33	True	AATAAA	-21	NA	35269064	35279814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35269802_35270004_35270446_35270598_35270717_35270806_35271082_35271142_35278697_35278793_35278969_35279075_35279166
transcript_98245.known	chr19	-	842	16	FSM	ENSG00000161249.21	ENST00000443640.5	842	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	534.578646121306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGTGCCAGCCCTG	2	True	NA	NA	False	NA	NA	NA	35510439	35497470	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_98248.known	chr19	-	1924	16	FSM	ENSG00000161249.21	ENST00000339686.8	1924	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	559.41007022279	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-1	True	NA	-10	True	AATAAA	-21	NA	35513649	35497219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_9827.known	chr1	+	2759	16	FSM	ENSG00000116171.19	ENST00000371514.8	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	352.117871678726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCTGGACATAATCAC	-9	True	NA	107	True	AATAAA	-30	NA	52927275	53051698	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52950754_52950887_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_98270.known	chr19	-	970	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	474.969236001585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	2	True	NA	-10	True	AATAAA	-21	NA	35510439	35497219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_9829.known	chr1	+	1889	15	FSM	ENSG00000116171.19	ENST00000371509.8	1889	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	363.994673654684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATTAGGAACAGTAA	1	True	NA	NA	False	NA	NA	NA	52927285	53050970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_98295.nic	chr19	-	1034	13	NIC	ENSG00000161249.21	novel	970	14	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	221	junction_2	425.30978089179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTTTCTCAAATTTTAT	0	True	NA	-11	True	AATAAA	-20	NA	35510546	35497220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_98298.known	chr19	-	935	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	430.608959949615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	10	True	NA	-10	True	AATAAA	-21	NA	35510431	35497219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_98307.known	chr19	-	827	13	FSM	ENSG00000161249.21	ENST00000467637.5	827	13	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_9	462.943091054997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	-5	True	NA	-127	True	NA	NA	NA	35510446	35497336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_9831.known	chr1	+	3002	11	FSM	ENSG00000174348.14	ENST00000312553.10	3002	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCAGCCTGTGGCTAT	7	True	NA	NA	False	TATAAA	-14	NA	53062212	53085494	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53062309_53069800_53070168_53071534_53071629_53074605_53074671_53075861_53075972_53077189_53077347_53077684_53077801_53078364_53079023_53080727_53080877_53081980_53082189_53084512
transcript_98319.known	chr19	-	1579	12	FSM	ENSG00000161249.21	ENST00000490622.5	1579	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	472.457038144805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTTTCTCAAATTTTAT	-29	True	NA	-11	True	AATAAA	-20	NA	35510470	35497220	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35497646_35497682_35498597_35498764_35498873_35498898_35499957_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_98321.known	chr19	-	593	12	FSM	ENSG00000161249.21	ENST00000472252.6	593	12	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	439.575621790753	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTCCTCCCCTTGGCCC	16	True	NA	NA	False	NA	NA	NA	35510425	35497489	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_98324.known	chr19	-	877	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	444.622915727566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	6	True	NA	-13	True	AATAAA	-18	NA	35510435	35497222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_98333.known	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	337.844895704699	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-29	True	NA	-75	True	NA	NA	NA	35510470	35497284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_98334.nic	chr19	-	998	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	625	junction_1	336.60789656967	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	0	True	NA	-12	True	AATAAA	-19	NA	35510546	35497221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_98344.known	chr19	-	848	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	347.703839495626	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	2	True	NA	-12	True	AATAAA	-19	NA	35510439	35497221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_98345.nic	chr19	-	885	11	NIC	ENSG00000161249.21	novel	848	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	625	junction_1	346.342619381444	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	21	True	NA	-12	True	AATAAA	-19	NA	35510484	35497221	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_98346.known	chr19	-	622	11	FSM	ENSG00000161249.21	ENST00000462126.5	622	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	540.146646754379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGTGCCAGCCCTGGC	-4	True	NA	NA	False	NA	NA	NA	35510509	35497468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35506050_35510183_35510253_35510482
transcript_9835.nnic	chr1	-	2377	10	NNC	ENSG00000162383.13	novel	2698	11	NA	NA	-24939	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.63299316185545	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTGGGCTTCAACAC	NA	False	NA	NA	False	AATAAA	-17	NA	53115921	53087182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_53088228_53088876_53088980_53089799_53089935_53090611_53090807_53092553_53092788_53093460_53093561_53103345_53103569_53105731_53105775_53114757_53114974_53115838
transcript_98351.known	chr19	-	642	11	FSM	ENSG00000161249.21	ENST00000463292.5	642	11	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_8	325.355574717877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTGTCAGAGTGAGCC	-3	True	NA	NA	False	NA	NA	NA	35510508	35498716	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_98376.known	chr19	-	1111	9	FSM	ENSG00000161249.21	ENST00000451297.6	1111	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	691.295161273388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGACAAGGAGCCACCA	209	False	NA	-119	True	NA	NA	NA	35513475	35503419	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_9838.known	chr1	-	2698	11	FSM	ENSG00000162383.13	ENST00000371494.9	2698	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.90787840283389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTGGGCTTCAACAC	-8	True	NA	NA	False	AATAAA	-17	NA	53142638	53087182	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53088228_53088876_53088980_53089799_53089935_53090611_53090807_53092553_53092788_53093460_53093561_53103345_53103569_53105731_53105775_53114757_53114974_53134349_53134430_53142314
transcript_98383.known	chr19	-	364	7	FSM	ENSG00000161249.21	ENST00000450261.1	364	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	643.493179623702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCGTGACCTCCAGAC	-1	True	NA	NA	False	AAAACA	-42	NA	35510442	35503431	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
transcript_98388.known	chr19	-	600	6	FSM	ENSG00000161249.21	ENST00000408915.6	600	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	396.528637049079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-1	True	NA	-10	True	AATAAA	-21	NA	35501911	35497219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35501822
transcript_9839.known	chr1	-	1102	8	FSM	ENSG00000162384.14	ENST00000294360.5	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	29.2463149606153	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTATCTTCAGTTG	-11	True	NA	-9	True	ATTAAA	-18	NA	53220634	53214098	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260_53220345_53220569
transcript_98395.known	chr19	-	458	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_3	436.577599058861	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-29	True	NA	-5	True	AATAAA	-15	NA	35510470	35503305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_98396.nic	chr19	-	528	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	774	junction_3	433.024248743647	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	0	True	NA	-3	True	AATAAA	-17	NA	35510546	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_98400.known	chr19	-	414	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_4	466.4672416151	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	3209	False	35510505	-3	True	AATAAA	-17	NA	35510475	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_98401.known	chr19	-	441	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_4	461.701472815498	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_98405.known	chr19	-	370	5	FSM	ENSG00000161249.21	ENST00000470746.6	370	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	438.186818035413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	5	True	NA	-3	True	AATAAA	-17	NA	35510436	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183_35510253_35510378
transcript_98407.known	chr19	-	306	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	445.222291545346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	18	True	NA	-3	True	AATAAA	-17	NA	35510423	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
transcript_98408.known	chr19	-	567	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_3	481.121144365487	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
transcript_98409.known	chr19	-	577	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_3	454.367348628838	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-28	True	NA	-3	True	AATAAA	-17	NA	35510469	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
transcript_98410.known	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	520.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	1	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35510183
transcript_98411.known	chr19	-	582	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	671.590375640584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_98412.known	chr19	-	510	8	FSM	ENSG00000161249.21	ENST00000458071.5	510	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	647.60478625754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	6	True	NA	-14	True	AATAAA	-6	NA	35510435	35503314	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_98413.known	chr19	+	868	7	FSM	ENSG00000105677.12	ENST00000222284.10	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_5	86.4272333623301	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	7	True	NA	29	True	AGTAAA	-17	NA	35545625	35547526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_98415.known	chr19	+	986	6	FSM	ENSG00000105677.12	ENST00000477168.6	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_4	94.351258603158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGCTGCCTCCATTT	21	True	NA	25	True	AGTAAA	-13	NA	35545639	35547522	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547030_35547118_35547241_35547323
transcript_98420.known	chr19	+	1045	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	68.9583207452154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	55	False	NA	29	True	AGTAAA	-17	NA	35545673	35547526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
transcript_98421.known	chr19	+	669	5	FSM	ENSG00000105677.12	ENST00000593027.6	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	840.202170611336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	-19	True	NA	26	True	AGTAAA	-14	NA	35545599	35547523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35547118_35547241_35547323
transcript_98428.known	chr19	-	2204	4	FSM	ENSG00000236144.9	ENST00000660839.1	2204	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	46.108567533594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGGTGACGGGGTT	811	False	NA	NA	False	NA	NA	NA	35545160	35540970	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35541929_35542910_35543274_35544111
transcript_98431.known	chr19	-	2640	4	FSM	ENSG00000236144.9	ENST00000660248.1	2640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.0479536666827	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-23	True	NA	-134	True	NA	NA	NA	35545515	35540859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35544111
transcript_98432.known	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	13	junction_3	38.2186690854963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-11	True	NA	-134	True	NA	NA	NA	35545503	35540859	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
transcript_98435.known	chr19	+	546	3	FSM	ENSG00000105677.12	ENST00000595180.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	26.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACCCCTGAGAAGGGAC	26	True	NA	NA	False	NA	NA	NA	35545644	35546829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525
transcript_98438.known	chr19	-	3499	3	FSM	ENSG00000236144.9	ENST00000667891.1	3499	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	46.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGATCCCCACTTC	-7	True	NA	NA	False	NA	NA	NA	35545563	35540916	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35541929_35542910
transcript_98440.known	chr19	-	3767	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	15.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-15	True	NA	-13	True	ATTAAA	-23	NA	35545507	35540738	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35542075_35542910
transcript_98441.known	chr19	+	562	2	FSM	ENSG00000105677.12	ENST00000596232.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGACTCAGATGCCCTGT	33	True	NA	99	True	NA	NA	NA	35545651	35546284	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887
transcript_98442.known	chr19	-	3911	1	FSM	ENSG00000236144.9	ENST00000588286.1	3911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGAGTAACCGGGTGC	0	True	NA	-10	True	AATAAA	-28	NA	35545492	35541581	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541600_35545500
transcript_98443.known	chr19	+	1783	2	FSM	ENSG00000105677.12	ENST00000595467.1	1783	2	0	0	0	0	multi-exon	FALSE	canonical	3	2195	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	39	True	NA	26	True	AGTAAA	-14	NA	35545657	35547523	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35547241_35547323
transcript_98444.known	chr19	+	935	6	FSM	ENSG00000105677.12	ENST00000392204.6	935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_4	90.4645787034903	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	11	True	NA	29	True	AGTAAA	-17	NA	35545629	35547526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_98450.known	chr19	+	4324	19	FSM	ENSG00000249115.9	ENST00000203166.10	4324	19	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_15	33.3740954471216	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTCCCTAGTTAAG	-29	True	NA	NA	False	AATAAA	-27	NA	35612734	35625355	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35619759_35620011_35620124_35620194_35620328_35622600_35622734_35622875
transcript_98457.known	chr19	+	2762	18	FSM	ENSG00000249115.9	ENST00000585968.5	2762	18	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	30.8984271892303	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTAGGTTGGGGGT	-12	True	NA	-44	True	NA	NA	NA	35612751	35623557	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35620124_35620194_35620328_35622600_35622734_35622875
transcript_98465.known	chr19	+	4387	18	FSM	ENSG00000249115.9	ENST00000428854.5	4387	18	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_14	33.7257409931395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATGTATTTCCCTA	36	False	NA	NA	False	AATAAA	-21	NA	35612799	35625349	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35619759_35620011_35620124_35620194_35620328_35622600_35622734_35622875
transcript_9847.known	chr1	+	2643	5	FSM	ENSG00000157184.7	ENST00000636867.1	2643	5	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_4	106.647491766098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATTTTTGCTTGAAG	-32	True	NA	-11	True	NA	NA	NA	53196791	53214178	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211251_53213263
transcript_98485.known	chr19	+	1692	10	FSM	ENSG00000126254.12	ENST00000262633.9	1692	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_5	167.971190945514	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	-14	True	NA	21	True	AATAAA	-17	NA	35629035	35637685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_98488.nnic	chr19	+	1691	10	NIC	ENSG00000126254.12	novel	1692	10	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	267.401903093037	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	0	True	NA	21	True	AATAAA	-17	NA	35629015	35637685	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633097_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_9849.known	chr1	+	2699	5	FSM	ENSG00000157184.7	ENST00000371486.4	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	33.7120156620751	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTCTTAATTTCTTTT	0	True	NA	8	True	AATAAA	-19	NA	53196823	53214197	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53213263
transcript_98494.known	chr19	+	1487	9	FSM	ENSG00000126254.12	ENST00000589871.1	1487	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	277.095172052853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCCCCAAAACCAGTT	15	False	NA	-23	True	NA	NA	NA	35629130	35637641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_98495.known	chr19	+	1609	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	277.748734245541	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGGCATGGAAGC	-20	True	NA	22	True	AATAAA	-18	NA	35629029	35637686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_985.known	chr1	-	554	6	FSM	ENSG00000127054.22	ENST00000498476.6	554	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	229.281835303192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATCGCCGTAGACAAG	-3	True	NA	NA	False	NA	NA	NA	1324660	1319402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319525_1320455_1320530_1320995_1321094_1321907_1321981_1323180_1323288_1324580
transcript_98507.known	chr19	+	771	5	FSM	ENSG00000126254.12	ENST00000586618.5	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	336.634352822168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	18	True	NA	20	True	AATAAA	-16	NA	35629067	35637684	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631197_35637249_35637353_35637441
transcript_98508.known	chr19	+	1487	7	FSM	ENSG00000105672.15	ENST00000402764.6	1487	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.21335164821342	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCGCGTGCTCCTCTGCA	4	True	NA	8	True	AATAAA	-19	NA	35641744	35644871	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35642157_35642433_35642531_35642614_35642699_35642964_35643046_35643273_35643754_35644234_35644348_35644651
transcript_98511.known	chr19	+	1335	6	FSM	ENSG00000105672.15	ENST00000403402.1	1335	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.32664991614216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCCCGGTCAAACCTCT	414	False	NA	-11	True	NA	NA	NA	35642154	35644852	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35642531_35642614_35642699_35642964_35643046_35643273_35643754_35644234_35644348_35644651
transcript_98516.known	chr19	+	488	4	FSM	ENSG00000126267.11	ENST00000649813.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	4670	junction_1	503.799783864803	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	-2	True	NA	23	True	AATAAA	-19	NA	35648322	35658782	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35648404_35651232_35651350_35654570_35654672_35658593
transcript_98519.known	chr19	+	290	2	FSM	ENSG00000126267.11	ENST00000590618.1	290	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTATGCGTGTGAAC	2920	False	NA	19	True	AATAAA	-15	NA	35651244	35658778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35651350_35658593
transcript_9852.known	chr1	+	2579	4	FSM	ENSG00000157184.7	ENST00000636239.1	2579	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	128.57250440467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTTTAAGCAGAAATAAAG	-24	True	NA	-29	True	NA	NA	NA	53196799	53214160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53210014_53211320_53213263
transcript_98522.known	chr19	-	795	2	FSM	ENSG00000226510.2	ENST00000443196.2	808	2	13	0	13	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	10	False	NA	-13	True	AATAAA	-14	NA	35673291	35667947	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35668686_35673234
transcript_9854.known	chr1	-	841	2	FSM	ENSG00000162384.14	ENST00000474227.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACCAAGCAGAGTGG	23	True	NA	NA	False	NA	NA	NA	53220600	53219534	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53220345_53220569
transcript_98540.nic	chr19	-	808	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_6	34.2863756549968	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	-18	True	NA	-9	True	AATAAA	-22	NA	35745435	35742530	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
transcript_98544.known	chr19	-	765	6	FSM	ENSG00000161265.15	ENST00000378975.8	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	36.5918023606381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-1	True	NA	-5	True	AATAAA	-26	NA	35745418	35742526	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35745124_35745213_35745347
transcript_98546.known	chr19	-	729	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	35.1761282690406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	9864	False	NA	-10	True	AATAAA	-21	NA	35745445	35742531	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
transcript_9855.known	chr1	-	490	1	FSM	ENSG00000162384.14	ENST00000602807.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGTCTTGGAAAGCTT	47	False	NA	0	True	ATTAAA	-21	NA	53220576	53220086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53220100_53220600
transcript_98550.known	chr19	-	329	3	FSM	ENSG00000126246.10	ENST00000591748.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	51	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTATGGCCCATGGC	30	True	NA	NA	False	NA	NA	NA	35740549	35739527	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35739627_35739709_35739770_35740379
transcript_98552.nic	chr19	-	1450	3	ISM	ENSG00000126246.10	ENST00000246532.6	1647	5	1828	0	-28	0	3prime_fragment	FALSE	canonical	3	64	junction_2	31	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGATTTAGAAACCTTT	4793	False	NA	-12	True	AATAAA	-16	NA	35740624	35738800	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_98556.nic	chr19	-	997	3	ISM	ENSG00000126246.10	ENST00000592537.5	1195	5	1823	0	-28	0	3prime_fragment	FALSE	canonical	3	64	junction_2	31	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGCCCAGTATACAATTA	4793	False	NA	-20	True	AATAAA	-16	NA	35740624	35739253	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_98557.known	chr19	-	482	2	FSM	ENSG00000126246.10	ENST00000587101.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGGAGTCCCCAACACC	-17	True	NA	NA	False	NA	NA	NA	35740596	35739823	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35740089_35740379
transcript_98558.known	chr19	-	782	2	FSM	ENSG00000126246.10	ENST00000592889.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCTATTCCAACATACA	4082	False	NA	77	True	NA	NA	NA	35741335	35739156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35739627_35741023
transcript_98559.known	chr19	-	1763	3	FSM	ENSG00000161265.15	ENST00000590135.5	1763	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	24	True	NA	-7	True	AATAAA	-24	NA	35744660	35742528	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35743905_35744069_35744422_35744625
transcript_9856.known	chr1	+	2739	6	FSM	ENSG00000157184.7	ENST00000637252.1	2739	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	131.391628348232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAATTTTTGCTTGAA	-24	True	NA	-12	True	NA	NA	NA	53196799	53214177	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53212780_53212817_53213263
transcript_98561.known	chr19	+	1037	11	FSM	ENSG00000188223.9	ENST00000591613.2	1037	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	449.043260722171	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	9	False	NA	8	True	AGTAAA	-18	NA	35745677	35754519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_98564.nnic	chr19	+	518	5	NNC	ENSG00000205155.8	novel	1124	4	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	505.982398409273	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGACTTCCTGGGATC	16	False	NA	22	True	AATAAA	-15	NA	35745584	35747002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707_35746756_35746910
transcript_98565.nnic	chr19	+	574	5	NNC	ENSG00000205155.8	novel	1124	4	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	505.982398409273	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGACTTCCTGGGATC	-8	True	NA	22	True	AATAAA	-15	NA	35745628	35747002	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707_35746869_35746923
transcript_98566.known	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	145.568616886409	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	14	True	NA	24	True	AATAAA	-26	NA	35745650	35747519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
transcript_98568.known	chr19	+	603	4	FSM	ENSG00000205155.8	ENST00000222266.2	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	544.456303725714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTGGGATCTT	-18	True	NA	24	True	AATAAA	-17	NA	35745618	35747004	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35745701_35745872_35745992_35746418_35746524_35746707
transcript_9857.known	chr1	-	656	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	98.4793760134578	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAACTCTTCTCAATT	-2	True	NA	-20	True	AATAAA	-44	NA	53238518	53226899	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
transcript_98570.known	chr19	+	833	3	FSM	ENSG00000205155.8	ENST00000591949.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTCGATACTGACTT	4	True	NA	13	True	AATAAA	-6	NA	35745599	35746993	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35745701_35745834_35745992_35746418
transcript_98571.known	chr19	+	935	9	FSM	ENSG00000267796.8	ENST00000301159.14	935	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	8.06225774829855	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	9	True	NA	8	True	AGTAAA	-18	NA	35748575	35754519	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35748759_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_98575.known	chr19	+	772	5	FSM	ENSG00000167595.15	ENST00000537459.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	9.01041064547005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAACCA	14	True	NA	NA	False	ACTAAA	-15	NA	35758193	35762563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762252
transcript_98576.known	chr19	+	1266	5	FSM	ENSG00000167595.15	ENST00000536950.5	1266	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	12.9807549857472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGCTGATCCCCATT	-1	True	NA	NA	False	AAAAAG	-1	NA	35758178	35763045	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762255
transcript_98579.known	chr19	+	612	4	FSM	ENSG00000167595.15	ENST00000545674.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	14.8548533034381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTGACATCCCCATTCA	1060	False	NA	NA	False	AATAAA	-1	NA	35759286	35762352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35759471_35759788_35759992_35762018_35762147_35762255
transcript_98581.known	chr19	+	650	3	FSM	ENSG00000167595.15	ENST00000421853.6	650	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCTGGGCACCGTG	18	True	NA	NA	False	TTTAAA	-13	NA	35758197	35762745	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35758227_35762018_35762147_35762252
transcript_98593.known	chr19	-	5535	29	FSM	ENSG00000161270.20	ENST00000378910.10	5535	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.84162472633625	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATAATAACAGCCCAGT	3	True	NA	NA	False	AATAAA	-19	NA	35852504	35825371	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35826646_35830843_35830957_35831052_35831147_35831295_35831372_35831475_35831501_35831642_35831763_35835704_35835762_35839236_35839419_35839495_35839608_35841714_35841867_35842123_35842281_35842378_35842551_35843471_35843594_35844102_35844244_35844318_35844460_35845367_35845541_35845668_35845799_35846007_35846195_35848040_35848166_35848252_35848398_35848636_35848795_35848975_35849148_35849235_35849364_35849549_35849654_35850363_35850446_35850960_35851090_35851261_35851385_35851456_35851673_35851779
transcript_98595.known	chr19	+	2342	17	FSM	ENSG00000105290.13	ENST00000652533.1	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	25.7420345689691	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCAGTCTGAGTCTCT	-4	True	NA	13	True	AATAAA	-14	NA	35868595	35879789	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35868784_35869666_35869811_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_9860.known	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	500.720369956015	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	17	True	NA	-46	True	AATAAA	-18	NA	53238499	53226925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
transcript_98609.nnic	chr19	+	2072	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	38.5069113565633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	538	False	NA	16	True	AATAAA	-17	NA	35870242	35879792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35870302_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_98610.nnic	chr19	+	2304	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	34.7019051670398	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	575	False	NA	16	True	AATAAA	-17	NA	35870279	35879792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35870571_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_98612.nnic	chr19	+	2260	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	35.7429091646938	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	699	False	NA	16	True	AATAAA	-17	NA	35870403	35879792	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35870651_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_98616.known	chr19	+	2980	15	FSM	ENSG00000126259.20	ENST00000360202.10	2980	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	7.2702917999997	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	-6	True	NA	11	True	AATAAA	-19	NA	35856910	35867136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_98624.known	chr19	+	2563	14	FSM	ENSG00000126259.20	ENST00000592409.5	2563	14	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_11	10.5936231795834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGAAGAGTCCTGGGAT	746	False	NA	NA	False	NA	NA	NA	35856586	35866500	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862926_35863037_35864647_35864714_35866156
transcript_9863.known	chr1	-	4534	18	FSM	ENSG00000157193.18	ENST00000662198.1	4534	18	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	57.0298895711562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTATAGATGTTCTTCA	NA	False	NA	-8	True	AATAAA	-17	NA	53328469	53245545	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
transcript_98639.known	chr19	-	1834	12	FSM	ENSG00000167604.15	ENST00000396901.5	1834	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	9.698768772503	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTTCCCAGAAACCCAG	8809	False	NA	NA	False	NA	NA	NA	35900650	35888240	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_98645.nic	chr19	-	2110	11	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	15.5897402159241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACTCAATTTGGACTA	-4	True	NA	NA	False	NA	NA	NA	35900544	35887652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35898471_35898533_35898718_35898823_35900441
transcript_98646.nic	chr19	-	2475	11	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	28	0	intron_retention	FALSE	canonical	3	36	junction_5	9.28224110869783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACTCAATTTGGACTA	8837	False	NA	NA	False	NA	NA	NA	35900622	35887652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_9865.known	chr1	-	3770	17	FSM	ENSG00000157193.18	ENST00000668071.1	3770	17	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	37.1617557947684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTATAGATGTTCTTC	202	False	NA	-9	True	AATAAA	-16	NA	53327883	53245546	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53247057_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
transcript_98652.nic	chr19	-	2174	11	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	28	287	intron_retention	FALSE	canonical	3	36	junction_5	9.28224110869783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGTGGCTCATGCCTG	8837	False	NA	-21	True	ATTAAA	-15	NA	35900622	35887953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_98659.nic	chr19	-	2226	10	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	4	287	intron_retention	FALSE	canonical	3	36	junction_5	9.01849950564579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGTGGCTCATGCCTG	-4	True	NA	-21	True	ATTAAA	-15	NA	35900544	35887953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_98664.nic	chr19	-	2632	9	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	37	junction_8	7.73688406272189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACTCAATTTGGACTA	8891	False	NA	NA	False	NA	NA	NA	35900568	35887652	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896539_35896725_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_98680.known	chr19	+	4690	3	FSM	ENSG00000126243.9	ENST00000246529.4	4690	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	19	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCAGTGTTAGGGGGTC	-9	True	NA	2	True	AATAAA	-19	NA	35936373	35946624	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35937556_35939409_35940841_35944547
transcript_98682.known	chr19	+	1125	1	FSM	ENSG00000205138.4	ENST00000378887.4	1125	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTGTTGGTGGTCTTA	-11	True	NA	16	True	AATAAA	-17	NA	35995187	35996312	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35995200_35996300
transcript_98686.known	chr19	-	955	8	FSM	ENSG00000239382.11	ENST00000252984.11	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	102.265361103517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCTCCCCTGGGTTATT	-14	True	NA	-93	True	GGGGCT	-35	NA	36014227	36009204	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36013513_36013589_36014174
transcript_98689.nnic	chr19	-	1223	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_6	60.3759057903068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36	True	NA	-35	True	AATAAA	-15	NA	36008813	36003309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
transcript_9869.nic	chr1	-	2327	4	ISM	ENSG00000157193.18	ENST00000655704.1	2819	18	-78	29420	-78	10416	5prime_fragment	FALSE	canonical	3	28	junction_3	123.726400667854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGTGGTGGCTA	544	False	NA	NA	False	AATACA	-17	NA	53327541	53278915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_53280716_53289566_53289690_53326872_53326993_53327257
transcript_98692.known	chr19	-	973	7	FSM	ENSG00000239382.11	ENST00000378875.8	951	7	-26	4	0	0	multi-exon	FALSE	canonical	3	142	junction_2	61.8025529857429	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGGTTTTATATTTT	3646	False	NA	-12	True	AATAAA	-11	NA	36014239	36009123	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36014174
transcript_98693.known	chr19	-	977	7	FSM	ENSG00000239382.11	ENST00000490986.5	977	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	88.9976591452457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	5	True	NA	-9	True	AATAAA	-14	NA	36014208	36009120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36014174
transcript_9870.known	chr1	-	2531	1	FSM	ENSG00000236253.7	ENST00000566100.1	2531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTTGAATGAGATGGAA	442	False	NA	NA	False	AATAAA	-15	NA	53439565	53437034	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53437000_53439600
transcript_9871.known	chr1	+	1910	4	FSM	ENSG00000143006.7	ENST00000371445.3	1910	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGGAAGGCTTATTC	2	True	NA	NA	False	AATAAA	-15	NA	53459398	53467488	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53460031_53461472_53461646_53464636_53464848_53466594
transcript_98714.known	chr19	-	3326	3	FSM	ENSG00000239382.11	ENST00000471323.1	3326	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	59	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGGTTTTATATTTTTA	1	True	NA	-10	True	AATAAA	-13	NA	36014212	36009121	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36013423_36014174
transcript_98715.known	chr19	-	2341	7	FSM	ENSG00000181392.17	ENST00000465425.2	2341	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	48.0127297934852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGAAGATACTAGGTG	-16	True	NA	-33	True	AATAAA	-17	NA	36008793	36003307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_98716.known	chr19	-	1377	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	44.490310800241	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36	True	NA	-32	True	AATAAA	-18	NA	36008813	36003306	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_98717.known	chr19	-	1004	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	68.7092424641693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-5	True	NA	-35	True	AATAAA	-15	NA	36008782	36003309	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
transcript_98718.known	chr19	-	861	6	FSM	ENSG00000239382.11	ENST00000490483.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.790372310977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	3702	False	NA	-9	True	AATAAA	-14	NA	36014183	36009120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011066_36011403_36011465_36013020_36013090_36014174
transcript_98731.known	chr19	+	4634	32	FSM	ENSG00000075702.19	ENST00000270301.12	4634	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	66.0006621856858	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTCCTGGTGTCTGT	19	True	NA	15	True	AATAAA	-15	NA	36054971	36105105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_9874.known	chr1	-	2807	10	ISM	ENSG00000174332.6	ENST00000628545.2	2870	11	1058	3	1058	-3	3prime_fragment	FALSE	canonical	0	0	junction_9	3.16227766016838	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGTGAAGTCCTCGTT	1111	False	NA	-9	True	ATTAAA	-10	NA	53738106	53506241	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_53506777_53509119_53509288_53509848_53510028_53514624_53514782_53520633_53520767_53524776_53524888_53529790_53529953_53594107_53594991_53600100_53600279_53737805
transcript_98741.known	chr19	+	4627	31	FSM	ENSG00000075702.19	ENST00000680403.1	4627	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	65.2063050802775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTACCCCCTGGCCAGCC	-6	True	NA	NA	False	NA	NA	NA	36054896	36104931	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517
transcript_98743.nic	chr19	+	4620	31	NIC	ENSG00000075702.19	novel	4727	32	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	74.0617535124124	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCCTGGTGTCTG	-14	True	NA	14	True	AATAAA	-14	NA	36054888	36105104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_9875.known	chr1	-	4552	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	0	0	0	0	multi-exon	TRUE	canonical	3	461	junction_7	54.5177029119519	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAACAGTTAATTGAAATA	-5	True	NA	-18	True	AATAAA	-18	NA	53838296	53765477	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_98756.known	chr19	+	4478	30	FSM	ENSG00000075702.19	ENST00000680564.1	4478	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	77.0228898756974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	-6	True	NA	18	True	AATAAA	-18	NA	36054896	36105108	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_98760.known	chr19	+	4339	30	FSM	ENSG00000075702.19	ENST00000679757.1	4339	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	70.8721613754383	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCCTGGTGTCTG	27	False	NA	14	True	AATAAA	-14	NA	36054929	36105104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_98770.nic	chr19	+	4479	29	NIC	ENSG00000075702.19	novel	4727	32	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	77.7098213003389	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCCTGGTGTCTG	-14	True	NA	14	True	AATAAA	-14	NA	36054888	36105104	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_98789.known	chr19	+	2987	19	FSM	ENSG00000075702.19	ENST00000680489.1	2987	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	68.2063861461015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGTATTAAAGTGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	36054648	36093142	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688
transcript_98806.known	chr19	-	3350	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_13	12.5382255758826	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCGGGTCATTGG	-23	True	NA	-4	True	AATAAA	-16	NA	36032873	36014659	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
transcript_98809.known	chr19	-	2080	13	FSM	ENSG00000105270.15	ENST00000593074.5	2080	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	10.0152661250491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCTCGATCATTGAGG	179	False	NA	NA	False	NA	NA	NA	36032671	36016035	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191
transcript_98820.known	chr19	-	1349	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	13.9124245031395	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-22	True	NA	-3	True	AATAAA	-21	NA	36054285	36034983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
transcript_98823.nic	chr19	-	1350	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	48.3758433747901	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	253	False	NA	-3	True	AATAAA	-21	NA	36054500	36034983	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054348
transcript_98826.known	chr19	-	1084	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	64.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	376	False	NA	NA	False	NA	NA	NA	36054377	36035147	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36035593_36039322_36039719_36054134
transcript_98829.known	chr19	+	2976	3	FSM	ENSG00000075702.19	ENST00000608676.2	2976	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTTAATCAAA	10	True	NA	NA	False	NA	NA	NA	36054962	36062665	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967
transcript_98830.known	chr19	+	643	4	FSM	ENSG00000267698.2	ENST00000586962.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAGGGAGAAATAAGA	-12	True	NA	NA	False	NA	NA	NA	36014507	36045972	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36014587_36016811_36016961_36019233_36019385_36045708
transcript_98834.known	chr19	+	1067	7	FSM	ENSG00000105254.12	ENST00000651435.1	1067	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	808.144926496617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	3	True	NA	19	True	ATTAAA	-20	NA	36115505	36125945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36124249_36124364_36125450_36125524_36125667
transcript_98839.known	chr19	+	724	6	FSM	ENSG00000105254.12	ENST00000589996.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	635.63983512678	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACCTAAGGAATTCCC	16	True	NA	-74	True	NA	NA	NA	36115518	36125778	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121670_36125450_36125524_36125667
transcript_9884.nnic	chr1	-	2444	15	NNC	ENSG00000058804.12	novel	785	5	NA	NA	11	-25337	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_1	140.16084055288	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTTAGGCGGTTTTTC	-3	True	NA	NA	False	AATAAA	-14	NA	53838452	53790814	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_53791433_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_98840.known	chr19	+	987	6	FSM	ENSG00000105254.12	ENST00000221855.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	1684	junction_2	60.8604962188118	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATTTAGAGGACTTC	-35	True	NA	15	True	ATTAAA	-16	NA	36115467	36125941	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_98846.known	chr19	+	875	6	FSM	ENSG00000105254.12	ENST00000585746.1	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	695.369944705694	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	62	False	NA	19	True	ATTAAA	-20	NA	36115837	36125945	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36115929_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_98850.known	chr19	-	493	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	945.311250329753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGAGTTTTCTGTGTTT	-16	True	NA	-10	True	AATAAA	-13	NA	36114906	36113715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
transcript_98852.known	chr19	-	443	6	FSM	ENSG00000105258.9	ENST00000221859.9	443	6	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	80.3183665172543	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	15	True	NA	-3	True	AATAAA	-20	NA	36114875	36113708	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
transcript_98853.known	chr19	-	744	6	FSM	ENSG00000105258.9	ENST00000586439.1	744	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	957.861785436709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCATGCGTGAGTTTT	-12	True	NA	-18	True	AATAAA	-5	NA	36115213	36113723	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114819
transcript_98857.known	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.2076229926569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	8	True	NA	-17	True	AATAAA	-6	NA	36115193	36113722	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
transcript_98860.known	chr19	-	542	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.6447851244009	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTGTGTTTATTTGC	-1	True	NA	-4	True	AATAAA	-19	NA	36114891	36113709	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
transcript_98863.known	chr19	+	1428	11	FSM	ENSG00000126247.11	ENST00000246533.8	1428	11	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	201.468707247552	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	-35	True	NA	27	True	AATAAA	-24	NA	36140065	36150353	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36140158_36140996_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_98864.known	chr19	+	1471	11	FSM	ENSG00000126247.11	ENST00000588815.5	1471	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	273.728624736252	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	26	True	NA	26	True	AATAAA	-23	NA	36140126	36150352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36140266_36140999_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_98865.nic	chr19	+	1263	10	NIC	ENSG00000126247.11	novel	690	8	NA	NA	110	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	274.904338019116	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	-1	True	NA	26	True	AATAAA	-23	NA	36141412	36150352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36141565_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_98866.nic	chr19	+	1179	10	NIC	ENSG00000126247.11	novel	570	8	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	270.892261395468	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	8	True	NA	26	True	AATAAA	-23	NA	36141615	36150352	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36141684_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_98870.known	chr19	-	340	4	FSM	ENSG00000161281.11	ENST00000292907.8	340	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	19	True	NA	-4	True	AATAAA	-13	NA	36152447	36150921	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36151035_36151461_36151547_36151668_36151756_36152392
transcript_98872.nnic	chr19	+	3306	4	NIC	ENSG00000167635.12	novel	3347	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_1	467.979344273512	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	-2	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36215156_36218121_36218196_36228747_36228820_36235658
transcript_98873.known	chr19	+	3347	4	FSM	ENSG00000167635.12	ENST00000443387.3	3347	4	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	357.592256938293	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	-2	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36215197_36218121_36218196_36228747_36228820_36235658
transcript_98876.known	chr19	+	533	3	FSM	ENSG00000167635.12	ENST00000591063.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	526.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTCATATGTTGCATTT	367	False	NA	NA	False	NA	NA	NA	36215095	36236059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36215156_36228747_36228820_36235658
transcript_98877.known	chr19	+	565	3	FSM	ENSG00000167635.12	ENST00000586094.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	447	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATATGTTGCATTTC	-2	True	NA	NA	False	NA	NA	NA	36215105	36236060	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36215197_36228747_36228820_36235658
transcript_9888.nic	chr1	-	1917	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_10	96.9243549295655	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	905	False	NA	-18	True	AATAAA	-27	NA	53889828	53851718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_98887.nic	chr19	-	1105	7	FSM	ENSG00000232677.10	ENST00000691592.1	1103	7	-18	16	-3	-10	multi-exon	FALSE	canonical	3	81	junction_5	339.709025818011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-30	True	NA	-16	True	ATTAAA	-16	NA	36331759	36313076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_98890.known	chr19	-	1581	7	FSM	ENSG00000232677.10	ENST00000658126.2	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	363.464081979071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	10	True	NA	-33	True	NA	NA	NA	36331662	36313093	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_98894.known	chr19	-	1003	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	16	0	-10	multi-exon	FALSE	canonical	3	299	junction_1	279.61187385374	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-24	True	NA	-16	True	ATTAAA	-16	NA	36331753	36313076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_98895.known	chr19	-	2038	6	FSM	ENSG00000232677.10	ENST00000585356.6	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	330.792019250767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACAATTGTGCCTTCT	22	True	NA	NA	False	AAGAAA	-20	NA	36331707	36312585	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_98897.known	chr19	-	1571	6	FSM	ENSG00000232677.10	ENST00000659786.2	1571	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	366.237955433349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTTTATTGACTC	-5	True	NA	NA	False	GGGGCT	-2	NA	36331734	36315219	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_989.known	chr1	-	485	4	FSM	ENSG00000127054.22	ENST00000534345.5	485	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	225.611760922756	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCCAGGTCAGGTTCC	-14	True	NA	NA	False	NA	NA	NA	1324671	1319305	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319525_1320455_1320530_1320995_1321097_1324580
transcript_9890.known	chr1	-	1602	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	74.148769376167	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	1000	False	NA	-18	True	AATAAA	-27	NA	53889733	53851718	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_98900.known	chr19	-	1749	6	FSM	ENSG00000232677.10	ENST00000590622.5	1749	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	403.164780207795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATAGCTTACAGTCTTT	11	True	NA	-22	True	AATAAA	-10	NA	36331718	36319715	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_98901.known	chr19	-	1903	6	FSM	ENSG00000232677.10	ENST00000438368.7	1903	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	416.207832699001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTACAGTCTTTCTTTT	21	True	NA	-17	True	AATAAA	-15	NA	36331708	36319710	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322385_36330252_36330493_36331446
transcript_98906.known	chr19	-	3581	5	FSM	ENSG00000232677.10	ENST00000666182.3	3595	5	14	0	7	0	multi-exon	FALSE	canonical	3	412	junction_1	275.287463390544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATAGGGCTCTTGGCT	-15	True	NA	-6	True	ATTAAA	-26	NA	36331687	36313066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_98913.known	chr19	-	2540	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	467.813590605869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-5	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
transcript_98915.known	chr19	-	2111	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	455.738472762127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-5	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
transcript_98917.known	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	412	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-16	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36325765_36330252_36330493_36331446
transcript_98920.known	chr19	-	2856	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	2	10	-1	6	multi-exon	FALSE	canonical	3	209	junction_1	441.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-25	True	NA	-14	True	AATAAA	-12	NA	36331754	36324917	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36327226_36330252_36330493_36331446
transcript_98921.known	chr19	-	2797	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	503	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-27	True	NA	-20	True	AATAAA	-6	NA	36331756	36324923	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36327171_36330252_36330493_36331446
transcript_98922.known	chr19	-	2047	2	FSM	ENSG00000232677.10	ENST00000661195.1	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTATGTTCAAATCTT	35	True	NA	NA	False	NA	NA	NA	36331694	36328693	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36330493_36331446
transcript_98926.known	chr19	-	7491	5	FSM	ENSG00000142065.14	ENST00000270001.12	7491	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	10.917302780449	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTTTTAATTT	-5	True	NA	0	True	AATAAA	-20	NA	36379201	36334452	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36341591_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_9893.known	chr1	-	1821	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	94.6678403683109	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-8	True	NA	-32	True	AATAAA	-13	NA	53889797	53851732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_98931.known	chr19	-	5941	5	FSM	ENSG00000181007.9	ENST00000392161.4	5941	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	7.14142842854285	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGCTACATAATGAG	8	True	NA	NA	False	AAAAAG	-1	NA	36418644	36388629	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36394111_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_98934.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	0	1	0	multi-exon	FALSE	canonical	2	11	junction_4	9.49670995661129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	355	False	NA	0	True	AATAAA	-19	NA	36489518	36445118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
transcript_98935.known	chr19	-	5197	5	FSM	ENSG00000186017.16	ENST00000434377.6	5197	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	11.202678251204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	438	False	NA	0	True	AATAAA	-19	NA	36489435	36445118	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489412
transcript_98937.known	chr19	-	5285	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGTTGTTTTTATTT	-16	True	NA	-1	True	AATAAA	-22	NA	36528271	36510686	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36515700_36525154_36525374_36528218
transcript_98940.known	chr19	-	330	2	FSM	ENSG00000254004.7	ENST00000520608.2	330	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGGGTTTTTTTGTTTG	-10	True	NA	NA	False	GATAAA	-45	NA	36528265	36525090	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36525374_36528218
transcript_98949.known	chr19	+	2080	4	FSM	ENSG00000233527.10	ENST00000670019.1	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	19.6015872373189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATAGAACCATAAGCTAA	-20	True	NA	NA	False	NA	NA	NA	36573344	36581812	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36573556_36574820_36574901_36577140_36577284_36580166
transcript_9895.nic	chr1	-	1647	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.0791658800246	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	890	False	NA	-32	True	AATAAA	-13	NA	53889843	53851732	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_98950.known	chr19	+	1004	3	FSM	ENSG00000233527.10	ENST00000448373.6	1004	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACATTAATTCAGTA	12	True	NA	6	True	AATAAA	-18	NA	36573376	36577915	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36573526_36574820_36574901_36577140
transcript_98954.known	chr19	+	2802	6	FSM	ENSG00000189042.14	ENST00000682579.1	2802	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	29.8087235553621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGTGTGTGTTTGCGT	12	True	NA	17	True	AATAAA	-27	NA	36687611	36721336	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36687635_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_98962.known	chr19	+	2691	4	FSM	ENSG00000189042.14	ENST00000360729.8	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	21.4527905462721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	15	False	NA	7	True	AATAAA	-17	NA	36689399	36721326	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36689498_36712385_36712513_36712780_36712868_36718947
transcript_98963.known	chr19	+	1850	2	FSM	ENSG00000267260.3	ENST00000590750.1	1850	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCGGGCATTTCCTGTG	3	True	NA	NA	False	AATAAA	-24	NA	36773152	36777078	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36773310_36775385
transcript_98965.known	chr19	-	3040	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	8.25757228245687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATATTAATTTCAC	-15	True	NA	NA	False	AGTAAA	-15	NA	36838387	36817427	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
transcript_98966.known	chr19	-	922	5	FSM	ENSG00000197863.9	ENST00000528994.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	5.67340285895511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGGTTCAGATCATAC	471	False	NA	-91	True	AATACA	-43	NA	36850313	36819806	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850001
transcript_98967.known	chr19	+	2959	3	FSM	ENSG00000251247.12	ENST00000420450.6	2959	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	-7	True	NA	12	True	ATTAAA	-24	NA	36850875	36879575	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36850969_36851829_36851905_36876784
transcript_98968.known	chr19	+	3639	5	FSM	ENSG00000197050.11	ENST00000337995.4	3639	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3.64005494464026	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGAAGTGGGA	-13	True	NA	63	True	AATAAA	-20	NA	37078432	37130368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127
transcript_9897.known	chr1	+	1861	4	FSM	ENSG00000211452.12	ENST00000361921.8	1861	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGATGGCTTCCGTGTG	-1	True	NA	NA	False	ATTAAA	-14	NA	53894186	53911086	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53894548_53904665_53904810_53906094_53906295_53909930
transcript_98970.known	chr19	-	6822	6	FSM	ENSG00000196967.11	ENST00000356958.8	6822	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7911230946827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGTTAGTCAACATTT	8953	False	NA	NA	False	AATAAA	-20	NA	37172741	37147437	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37165594_37165697_37169838_37170055_37172626
transcript_98971.known	chr19	-	8572	5	FSM	ENSG00000196967.11	ENST00000292841.10	8572	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	26.2047228567676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGTGTTCTATTAT	4	True	NA	NA	False	AATAAA	-16	NA	37172695	37145539	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37169838_37170055_37172626
transcript_98972.known	chr19	-	596	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTCTTTTTTTTT	5	True	NA	NA	False	AATAAA	-17	NA	37172694	37165384	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37165697_37169838_37170055_37172626
transcript_98973.known	chr19	+	6732	6	FSM	ENSG00000188283.12	ENST00000684119.1	6732	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.00285656000464	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCAGTATCACTGTT	0	True	NA	NA	False	AATAAA	-18	NA	37218213	37248740	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37218275_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_98979.nic	chr19	+	3007	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	29.1742847194047	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAATTGTCAGTGTAT	-15	True	NA	32	True	AATAAA	-22	NA	37317885	37364447	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
transcript_98983.known	chr19	+	2854	6	FSM	ENSG00000181666.19	ENST00000544914.5	2854	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	37.451835736049	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	10	True	NA	31	True	AATAAA	-21	NA	37317910	37364446	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347776_37347873_37362108
transcript_98987.known	chr19	+	664	5	FSM	ENSG00000181666.19	ENST00000591485.5	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	32.4451460160068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAGGCCTGAGCCACT	18	True	NA	NA	False	NA	NA	NA	37317918	37325047	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795
transcript_9899.known	chr1	-	894	6	FSM	ENSG00000081870.12	ENST00000371378.6	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	328.958356027021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTTTGCCAAGTTT	1	True	NA	-20	True	AATAAA	-15	NA	53945572	53916573	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53917117_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_98990.known	chr19	+	958	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	43.9914764471483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGAGTTCATGCCAC	-1	True	NA	NA	False	AAGAAA	-20	NA	37317899	37329105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
transcript_98991.known	chr19	+	2772	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	17	-4	-5	4	multi-exon	FALSE	canonical	3	30	junction_1	34.8164831653055	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTCAGTGTATCCTC	3	True	NA	36	True	AATAAA	-26	NA	37334665	37364451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
transcript_98992.known	chr19	+	563	5	FSM	ENSG00000181666.19	ENST00000591391.5	563	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	41.4276477729547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCAGGATCCATTCTGC	-5	True	NA	NA	False	AAAACA	-21	NA	37334657	37362273	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37334783_37335168_37335258_37347231_37347317_37347776_37347873_37362105
transcript_98993.known	chr19	+	2152	5	FSM	ENSG00000181666.19	ENST00000589392.5	2152	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.4849370253831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGCCATTGCTAGATA	8	True	NA	NA	False	NA	NA	NA	37334670	37363864	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37334783_37335199_37335258_37347189_37347317_37347776_37347873_37362105
transcript_98996.known	chr19	+	573	4	FSM	ENSG00000181666.19	ENST00000592768.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	42.166337284616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAGCAGAATGGATTCA	NA	False	NA	NA	False	NA	NA	NA	37334623	37362299	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37334783_37347189_37347317_37347776_37347873_37362108
transcript_98998.known	chr19	+	5186	5	FSM	ENSG00000189164.15	ENST00000436120.7	5186	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	7.11951543294907	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCCAGGCTTTGT	-3	True	NA	NA	False	TTTAAA	-19	NA	37371098	37393066	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37388305
transcript_98999.known	chr19	-	4066	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	5.84465567848098	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGTGGTGACAAATC	-5	True	NA	-18	True	AATAAA	-15	NA	37467444	37411156	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
transcript_99.known	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_2	37.5	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_8976_9189_9299_9434
transcript_990.known	chr1	-	549	4	FSM	ENSG00000127054.22	ENST00000531019.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	234.864973028239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	-3	True	NA	NA	False	NA	NA	NA	1324660	1319380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319525_1320455_1320683_1320995_1321094_1324580
transcript_99005.known	chr19	-	4327	5	FSM	ENSG00000198182.13	ENST00000355202.9	4327	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	27.8073731229687	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCATTACTTGTGTTA	-11	True	NA	NA	False	AATAAA	-20	NA	37719761	37696370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37699896_37707913_37708013_37709695_37709823_37711609_37711693_37719268
transcript_99006.known	chr19	-	913	3	FSM	ENSG00000266916.8	ENST00000589025.6	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-40	NA	37507122	37497158	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37497593_37505845_37506041_37506838
transcript_99008.known	chr19	-	1033	4	FSM	ENSG00000266916.8	ENST00000585890.3	1038	4	0	5	0	-5	multi-exon	TRUE	canonical	0	0	junction_2	5.24933858267454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTTCAAGGTTCT	17	False	37507104	NA	False	AATAAA	-35	NA	37507087	37497163	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37497593_37498023_37498184_37505845_37506041_37506838
transcript_99009.known	chr19	-	2289	4	FSM	ENSG00000180479.14	ENST00000451802.7	2289	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATCTGATATTTGTT	-24	True	NA	NA	False	ATTAAA	-19	NA	37594792	37564259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594740
transcript_9901.known	chr1	-	685	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_5	99.674269498201	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-10	True	NA	-8	True	ATTAAA	-15	NA	53945699	53921560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_99011.known	chr19	-	2253	5	FSM	ENSG00000189144.15	ENST00000536220.7	2253	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.12132034355964	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	7	True	NA	NA	False	NA	NA	NA	37779586	37738301	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37740195_37770004_37770098_37771563_37771697_37773660_37773752_37779543
transcript_99012.known	chr19	+	6580	5	FSM	ENSG00000267640.7	ENST00000443870.3	6580	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	2.87228132326901	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCTGTTCTGAGTAG	-3	True	NA	4	True	AATAAA	-19	NA	37817410	37832160	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37823810_37823907_37826171
transcript_99015.known	chr19	+	608	3	FSM	ENSG00000105738.11	ENST00000476317.2	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	30.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCAGCATCCTTCATCC	201	False	NA	NA	False	NA	NA	NA	37932345	38081448	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37932693_38029088_38029157_38081255
transcript_99017.known	chr19	-	2301	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_11	19.1220525195907	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	0	True	NA	-5	True	ATTAAA	-26	NA	38224222	38211005	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_99018.nnic	chr19	-	1709	12	NNC	ENSG00000011332.22	novel	2301	12	NA	NA	440	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	21.0512950858941	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAGTTAATA	1469	False	NA	NA	False	AAAAAG	-28	NA	38228253	38211699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38228042
transcript_99019.known	chr19	-	1562	12	FSM	ENSG00000011332.22	ENST00000456296.5	1562	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	13.6871780501025	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGAGCCTTTTTCTAA	4	True	NA	NA	False	NA	NA	NA	38229677	38211754	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
transcript_99021.known	chr19	-	2356	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	19.9192585078896	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGCCTCGTTCTCCCGT	5472	False	NA	-8	True	ATTAAA	-23	NA	38224250	38211008	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_99022.nnic	chr19	-	1739	12	NNC	ENSG00000011332.22	novel	2356	12	NA	NA	440	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	21.7540724789978	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAGTTAATA	1469	False	NA	NA	False	AAAAAG	-28	NA	38228253	38211699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38228042
transcript_99023.known	chr19	-	2341	12	FSM	ENSG00000011332.22	ENST00000686058.1	2341	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	15.0057840088083	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTATTAAACTGGGCCT	8	False	NA	-42	True	NA	NA	NA	38229714	38211042	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
transcript_99025.known	chr19	-	1567	11	FSM	ENSG00000011332.22	ENST00000471976.5	1567	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	20.0509351402871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAGGGGGAGAGGGGGA	5472	False	NA	NA	False	NA	NA	NA	38224250	38211973	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_9903.nnic	chr1	-	618	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-615	0	at_least_one_novel_splicesite	FALSE	canonical	3	280	junction_5	228.989432070565	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-21	True	NA	-8	True	ATTAAA	-15	NA	53946314	53921560	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
transcript_99030.nic	chr19	-	1588	11	NIC	ENSG00000011332.22	novel	1608	12	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	21.6277599394852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAGTTAATA	-18	True	NA	NA	False	AAAAAG	-28	NA	38229699	38211699	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
transcript_99037.nic	chr19	-	1778	10	ISM	ENSG00000011332.22	ENST00000614244.4	2356	12	10	1966	10	-903	5prime_fragment	FALSE	canonical	3	15	junction_9	18.7978196791904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCGTTTCTGGCAG	5482	False	NA	NA	False	AAAACA	-14	NA	38224240	38212974	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_99045.known	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	519.272507937788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	21	True	NA	-12	True	AATAAA	-17	NA	38315923	38305113	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_99051.known	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_7	345.81568760818	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-19	True	NA	NA	False	NA	NA	NA	38315793	38305351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
transcript_99052.nic	chr19	-	1308	8	NIC	ENSG00000167645.17	novel	2769	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_7	373.676603604819	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGACAGCCTCTCCTTGG	-1	True	NA	-13	True	AATAAA	-16	NA	38315906	38305114	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
transcript_99053.known	chr19	-	940	8	FSM	ENSG00000167645.17	ENST00000591784.5	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	380.644887805215	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	6087	False	NA	NA	False	NA	NA	NA	38315799	38305351	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315746
transcript_99054.known	chr19	-	1181	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_7	252.349773455942	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	5972	False	NA	-2	True	AATAAA	-27	NA	38315914	38305103	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_99058.known	chr19	-	1077	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	449.630142790853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAAT	5966	False	NA	NA	False	NA	NA	NA	38315920	38306696	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_99060.known	chr19	+	1688	7	FSM	ENSG00000167642.13	ENST00000301244.12	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	3278	junction_5	131.776325643114	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGAACTTTCGCCAA	-3	True	NA	23	True	AATAAA	-16	NA	38264572	38292615	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38264999_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_99061.known	chr19	+	1246	7	FSM	ENSG00000167642.13	ENST00000587090.5	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1321.8644240449	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCATGTGCTTTCTTT	0	True	NA	16	True	AATAAA	-26	NA	38264575	38292451	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38264724_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_99076.known	chr19	+	1367	6	FSM	ENSG00000167642.13	ENST00000454580.7	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1332.06831656638	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	0	True	NA	33	True	AATAAA	-43	NA	38264575	38292468	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38264999_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_99089.known	chr19	+	520	4	FSM	ENSG00000167644.12	ENST00000588605.5	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	28.8790581563873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	0	True	NA	24	True	ATTAAA	-18	NA	38304163	38305006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38304284_38304374_38304491_38304564_38304687_38304844
transcript_99090.known	chr19	+	374	4	FSM	ENSG00000167644.12	ENST00000301246.10	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	10.9645894689324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	25	True	NA	24	True	ATTAAA	-18	NA	38304250	38305006	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38304284_38304374_38304491_38304623_38304687_38304844
transcript_99091.known	chr19	-	560	4	FSM	ENSG00000167641.11	ENST00000301242.9	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	15.2534149181967	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	0	True	NA	-1	True	NA	NA	NA	38256374	38251236	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38251447_38252305_38252339_38252893_38252975_38256138
transcript_99092.known	chr19	+	580	3	FSM	ENSG00000167642.13	ENST00000590210.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	3617	junction_1	26	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTGAAAGGACACTTG	56	False	NA	NA	False	NA	NA	NA	38264695	38287981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38264999_38283626_38283798_38287875
transcript_99097.known	chr19	+	5721	3	FSM	ENSG00000099337.5	ENST00000263372.5	5721	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	7	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTACTATGCTTTTTC	-4	True	NA	29	True	AATAAA	-24	NA	38319844	38332076	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38320273_38326592_38326989_38327179
transcript_991.known	chr1	-	704	4	FSM	ENSG00000127054.22	ENST00000490853.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	227.863019280346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	8	True	NA	NA	False	NA	NA	NA	1324649	1319380	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319844_1320455_1320530_1320995_1321094_1324580
transcript_99104.known	chr19	+	1330	7	FSM	ENSG00000099341.12	ENST00000602911.5	1330	7	0	0	0	0	multi-exon	FALSE	canonical	3	1739	junction_6	104.13399487626	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGAAATGGAACCCATC	122	False	NA	28	True	AATAAA	-34	NA	38374758	38383824	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116_38382229_38383252
transcript_99106.known	chr19	+	771	6	FSM	ENSG00000099341.12	ENST00000592561.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	1913	junction_3	61.0737259384099	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGACCAAGGGGTGAAGT	-6	True	NA	NA	False	NA	NA	NA	38374771	38382254	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116
transcript_99113.known	chr19	+	853	5	FSM	ENSG00000099341.12	ENST00000592001.5	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	1913	junction_3	64.5174395028197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCATGGAATTGGTTCA	10	True	NA	NA	False	NA	NA	NA	38374787	38381235	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898
transcript_99122.known	chr19	-	520	2	FSM	ENSG00000179168.15	ENST00000587676.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACCCCGGGAGCCCC	NA	False	NA	NA	False	NA	NA	NA	38388082	38387082	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38387281_38387760
transcript_99127.known	chr19	-	2293	17	FSM	ENSG00000171777.16	ENST00000587738.2	2293	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	2.24217388933151	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTCCCTGCACTTAGT	8434	False	NA	NA	False	NA	NA	NA	38426162	38409839	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38410097_38410885_38410999_38411114_38411250_38411344_38411382_38412671_38412817_38412930_38413050_38413192_38413298_38413393_38413475_38414847_38415124_38417051_38417169_38418390_38418565_38419859_38420014_38420130_38420263_38420907_38420970_38421093_38421201_38421968_38422154_38426068
transcript_99130.known	chr19	+	1271	8	FSM	ENSG00000130244.13	ENST00000252530.10	1313	8	42	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	9.3917028079392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGACCTCTCTCTGT	-1	True	NA	17	True	AATAAA	-15	NA	38403134	38409084	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38403219_38403337_38403487_38403559_38403695_38404907_38405114_38405343_38405422_38405518_38405636_38406909_38407078_38408750
transcript_99133.known	chr19	+	2530	7	FSM	ENSG00000130244.13	ENST00000588348.5	2530	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	9.82626864865578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGACCTCTCTCTGTGGGG	18	True	NA	21	True	AATAAA	-19	NA	38403153	38409088	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38403219_38403337_38403487_38403559_38403695_38404907_38405114_38405343_38405422_38405518_38407078_38408750
transcript_99139.known	chr19	+	826	5	FSM	ENSG00000130244.13	ENST00000588262.5	826	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.795715776557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAAGAACCATGTTCTCC	-1	True	NA	-27	True	NA	NA	NA	38403134	38409040	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38403219_38403337_38403487_38403559_38403695_38406909_38407078_38408750
transcript_99143.nnic	chr19	+	1098	10	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-42	-20815	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	3.10714032313546	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTAGCCGGGTGTGGTGG	-3	True	NA	5	True	AATAAA	-20	NA	38433648	38447071	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_99144.nic	chr19	+	1275	9	ISM	ENSG00000196218.14	ENST00000599547.6	11455	80	-181	88330	-42	-20824	5prime_fragment	FALSE	canonical	2	8	junction_3	3.29535658161602	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAGAATTAGCCGG	-3	True	NA	-4	True	AATAAA	-11	NA	38433648	38447062	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693
transcript_99146.known	chr19	-	2700	32	FSM	ENSG00000104814.13	ENST00000591517.5	2700	32	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_31	27.1975851287689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-6	True	NA	-1	True	AATAAA	-19	NA	38617924	38587640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38587818_38589177_38589276_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596311_38596487_38597033_38597138_38597325_38597385_38597485_38597595_38599924_38599986_38600076_38600154_38601440_38601526_38605408_38605492_38605567_38605731_38606172_38606216_38607863_38607912_38607989_38608034_38608111_38608171_38609595_38609675_38609908_38610026_38611050_38611133_38611242_38611306_38612610_38612743_38613879_38613953_38614042_38614086_38614244_38614293_38614389_38614446_38616194_38616260_38617353_38617445_38617567_38617626_38617796
transcript_99148.known	chr19	-	2631	31	FSM	ENSG00000104814.13	ENST00000396857.7	2631	31	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_30	32.3455131698698	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	11	True	NA	-1	True	AATAAA	-19	NA	38617953	38587640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596311_38596487_38597033_38597138_38597325_38597385_38597485_38597595_38599924_38599986_38600076_38600154_38601440_38601526_38605408_38605492_38605567_38605731_38606172_38606216_38607863_38607912_38607989_38608034_38608111_38608171_38609595_38609675_38609908_38610026_38611050_38611133_38611242_38611306_38612610_38612743_38613879_38613953_38614042_38614086_38614244_38614293_38614389_38614446_38616194_38616260_38617353_38617445_38617567_38617626_38617796
transcript_99152.nnic	chr19	-	602	6	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-492	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	34.8505380159331	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596222	38587640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596077
transcript_99156.nnic	chr19	-	544	4	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-413	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	43.9089968002003	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596143	38587640	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595730_38596077
transcript_99158.known	chr19	+	516	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	NA	False	NA	8	True	AATACA	-17	NA	38596345	38601694	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38596437_38597252_38597396_38601412
transcript_99159.known	chr19	+	760	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	732.079509454585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	13	False	NA	24	True	AATAAA	-16	NA	38619094	38636953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_99161.known	chr19	+	780	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	756.63017533153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	0	True	NA	26	True	AATAAA	-18	NA	38619081	38636955	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_99164.known	chr19	+	772	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	0	0	0	0	multi-exon	FALSE	canonical	3	1657	junction_7	215.675493200658	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	-8	True	NA	25	True	AATAAA	-17	NA	38619187	38636954	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_99165.known	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	751.043940126009	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	15	True	NA	24	True	AATAAA	-16	NA	38619210	38636953	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
transcript_99166.known	chr19	+	501	5	FSM	ENSG00000178982.10	ENST00000588934.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	943.620785856268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTACTGTCTCCTCCCTG	-10	True	NA	23	True	AATAAA	-15	NA	38619185	38636952	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38636888
transcript_99183.known	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	37.0619413954531	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	0	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_99185.nic	chr19	+	3607	21	NIC	ENSG00000130402.13	novel	4990	21	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_18	53.2232092230448	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCACAAAAACAAAAAAACTA	NA	False	NA	-35	True	AAAAAG	-42	NA	38647571	38730144	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
transcript_9919.known	chr1	+	1764	9	FSM	ENSG00000116212.15	ENST00000371370.8	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	83.2442753286975	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-7	True	NA	28	True	AATAAA	-19	NA	53946349	53968168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53946550_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_99192.known	chr19	+	2923	21	FSM	ENSG00000130402.13	ENST00000424234.7	2923	21	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	33.035246328732	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCCTCCGGGGTGGGT	11	True	NA	NA	False	NA	NA	NA	38647659	38729533	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_99194.known	chr19	+	4958	21	FSM	ENSG00000130402.13	ENST00000440400.2	4958	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_18	50.9682253958287	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTCAGTTTCCTTAC	11	True	NA	NA	False	AATATA	-11	NA	38647659	38731583	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
transcript_992.known	chr1	-	773	4	FSM	ENSG00000127054.22	ENST00000532952.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	232.563969694362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTGCATGAAGAAGGT	15	True	NA	NA	False	NA	NA	NA	1324642	1319346	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319886_1320455_1320530_1320995_1321094_1324580
transcript_9921.nic	chr1	+	2155	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	-40	0	intron_retention	FALSE	canonical	3	29	junction_1	120.54330134852	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-20	True	NA	28	True	AATAAA	-19	NA	53946044	53968168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_9924.nnic	chr1	+	1632	9	NNC	ENSG00000116212.15	novel	611	3	NA	NA	263	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	106.830400050735	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	191	False	NA	28	True	AATAAA	-19	NA	53946620	53968168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_53946689_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_9927.known	chr1	+	1727	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	59.8682226363256	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-4	True	NA	28	True	AATAAA	-19	NA	53946352	53968168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_993.known	chr1	-	896	4	FSM	ENSG00000127054.22	ENST00000493534.6	896	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	230.213427545446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAACCCACCAGGCTCT	-1	True	NA	NA	False	NA	NA	NA	1324658	1319059	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319706_1320455_1320530_1320995_1321094_1324580
transcript_9932.known	chr1	-	6457	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_7	151.553721868666	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATCTTGTAAAAGTGTC	16	True	NA	-11	True	AATAAA	-28	NA	54053204	54026680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
transcript_9935.known	chr1	-	1116	8	FSM	ENSG00000116209.12	ENST00000371341.5	1116	8	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_7	227.108982199997	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	NA	False	NA	28	True	NA	NA	NA	54053504	54031965	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
transcript_99372.known	chr19	-	2552	1	FSM	ENSG00000182472.9	ENST00000601685.1	2552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	-5	True	NA	NA	False	NA	NA	NA	38735672	38733120	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38733100_38735700
transcript_99397.known	chr19	-	2142	13	FSM	ENSG00000104824.18	ENST00000221419.10	2142	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	404.498274615191	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-28	True	NA	0	True	AATAAA	-43	NA	38849986	38836369	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_99400.known	chr19	-	1633	13	FSM	ENSG00000104824.18	ENST00000600873.5	1633	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	537.995217605758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTCCTTTTTTTTTT	4	True	NA	-21	True	NA	NA	NA	38852338	38836634	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_99441.known	chr19	-	1200	10	FSM	ENSG00000104823.9	ENST00000221418.9	1200	10	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_8	46.5426924685522	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTTCTTGGATA	0	True	NA	NA	False	AATAAA	-14	NA	38831794	38815421	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_9945.known	chr1	-	3276	18	FSM	ENSG00000157216.16	ENST00000610401.5	3276	18	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	50.3013754653133	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-2	True	NA	-23	True	ATTAAA	-19	NA	54406419	54225432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54258068_54258150_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_9946.nnic	chr1	-	2351	18	NNC	ENSG00000157216.16	novel	2865	18	NA	NA	123	408	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	79.7686100033623	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACCAGAAGCCCTGCT	7596	False	NA	NA	False	AAAAAG	-21	NA	54405885	54226646	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54258068_54258150_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405129
transcript_99461.known	chr19	-	882	8	FSM	ENSG00000104823.9	ENST00000598707.5	882	8	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_6	50.5286340320304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGATTGGGCTGTTT	8545	False	NA	NA	False	NA	NA	NA	38831775	38816135	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_99470.known	chr19	-	659	6	FSM	ENSG00000104824.18	ENST00000600233.5	659	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	729.725044109081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGTGGACAAGGTAAT	3275	False	NA	NA	False	NA	NA	NA	38849368	38843856	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849307
transcript_99471.nic	chr19	-	2644	6	ISM	ENSG00000104824.18	ENST00000221419.10	2142	13	-8	5736	-8	1265	5prime_fragment	FALSE	canonical	0	0	junction_2	593.240389724098	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAACCACAACAAAAAAA	2649	False	NA	68	True	NA	NA	NA	38849994	38842105	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_99473.known	chr19	-	1127	6	FSM	ENSG00000104824.18	ENST00000601047.5	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	733.356829926605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGGTGAGACACTCTGG	4	True	NA	NA	False	NA	NA	NA	38852338	38843370	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_99476.known	chr19	-	786	5	FSM	ENSG00000104823.9	ENST00000601060.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_3	52.1632054229799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTGGGGGGCCTGGA	8479	False	NA	NA	False	NA	NA	NA	38831841	38817021	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38817130_38817315_38817576_38831077_38831167_38831308_38831517_38831720
transcript_9949.known	chr1	-	2784	17	FSM	ENSG00000157216.16	ENST00000371319.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_12	68.1789637186574	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	7473	False	NA	-23	True	ATTAAA	-19	NA	54406008	54225432	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_99499.nnic	chr19	-	1862	13	NNC	ENSG00000187994.14	novel	3058	12	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_4	13.8914442093766	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	-18	True	NA	NA	False	AAAACA	-19	NA	38878289	38868981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942_38870085_38870142_38870261_38870569_38870993_38871077_38871228_38871646_38871712_38871797_38871871_38873885_38873989_38876330_38876491_38876692_38876782_38878231
transcript_99502.known	chr19	-	3058	12	FSM	ENSG00000187994.14	ENST00000591812.2	3058	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	14.0765322551607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTTGTGTGTGT	-4	True	NA	-3	True	ATTAAA	-22	NA	38878275	38867829	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942_38870261_38870569_38870993_38871077_38871228_38871646_38871712_38871797_38871871_38873885_38873989_38876330_38876491_38876692_38876782_38878231
transcript_99507.known	chr19	-	1846	11	FSM	ENSG00000187994.14	ENST00000598904.5	1846	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	14.8067552151037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	2456	False	NA	NA	False	AAAACA	-19	NA	38876781	38868981	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942_38870261_38870569_38870993_38871077_38871228_38871646_38871712_38871797_38871871_38873885_38873989_38876330_38876475_38876692
transcript_99508.known	chr19	-	1810	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTGTATGTTTGTGT	16	True	NA	-7	True	ATTAAA	-18	NA	38870043	38867833	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38869411_38869572_38869705_38869942
transcript_99510.known	chr19	-	1862	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	20.862938964159	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTCTGGCCTCCTGTTT	0	True	NA	-4	True	ATTAAA	-19	NA	38899618	38878559	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
transcript_99513.known	chr19	-	2062	15	FSM	ENSG00000068903.21	ENST00000392081.6	2062	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	8.21676981072544	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	38899862	38878556	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
transcript_99519.known	chr19	+	1929	5	FSM	ENSG00000104825.17	ENST00000572515.5	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	17.9164728671689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-25	True	NA	NA	False	NA	NA	NA	38899951	38908538	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398
transcript_99520.known	chr19	+	1192	6	FSM	ENSG00000104825.17	ENST00000313582.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	84.336468979914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	-8	True	NA	16	True	AATAAA	-21	NA	38899968	38908889	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_99525.known	chr19	+	2200	5	FSM	ENSG00000104825.17	ENST00000509705.3	2200	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	167.023014881183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGACTGATCTTGTCT	3	True	NA	20	True	AATAAA	-25	NA	38899979	38908893	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38900212_38905070_38905121_38905201_38905536_38907220_38907310_38907398
transcript_99531.nic	chr19	-	1834	17	NIC	ENSG00000104835.15	novel	1924	16	NA	NA	-34	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	110.179523250693	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	NA	False	NA	-4	True	AATAAA	-14	NA	38930797	38915265	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38915491_38915614_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_99535.known	chr19	-	1630	17	FSM	ENSG00000104835.15	ENST00000600042.5	1630	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	131.045063217773	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCAGGAGACCCCGGAC	-8	True	NA	NA	False	NA	NA	NA	38930761	38915563	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921597_38922001_38922079_38922237_38922268_38926204_38926301_38930469
transcript_99541.known	chr19	-	1886	16	FSM	ENSG00000104835.15	ENST00000430193.7	1886	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	83.5231438318479	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAAAGTCCCCAATAAA	-5	True	NA	-37	True	NA	NA	NA	38930758	38915298	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917828_38917914_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_9955.known	chr1	-	6193	8	FSM	ENSG00000215883.11	ENST00000534324.6	6193	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	11.4321422992815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTGCTTGTTCAATG	-15	True	NA	-3	True	ATTAAA	-15	NA	54200030	54169650	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54190747_54190897_54195418_54195716_54196368_54196492_54199975
transcript_9956.known	chr1	+	1483	7	FSM	ENSG00000116221.15	ENST00000360840.9	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_5	73.6176307385368	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTGGTATGAGGG	-15	True	NA	26	True	AATAAA	-22	NA	54200166	54218383	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54218171
transcript_9957.known	chr1	+	1582	7	FSM	ENSG00000116221.15	ENST00000605337.5	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	599.895824289518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACATATATCGTACACA	14	True	NA	-5	True	AATAAA	-6	NA	54200195	54225464	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54225124
transcript_9961.known	chr1	-	3339	7	FSM	ENSG00000215883.11	ENST00000421415.5	3339	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	12.7725834852973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAACCTTATGTGGTGGT	5	True	NA	NA	False	NA	NA	NA	54200010	54172335	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54195418_54195716_54196368_54196492_54199975
transcript_99614.known	chr19	-	2315	6	FSM	ENSG00000161243.9	ENST00000292853.9	2315	6	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_5	21.442014830701	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTCAGATCTTTTTAAT	-6	True	NA	-3	True	AATAAA	-19	NA	39032549	39024020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39025555_39026869_39027006_39031028_39031125_39031208_39031321_39031863_39032254_39032502
transcript_99616.known	chr19	+	959	3	FSM	ENSG00000128626.12	ENST00000308018.9	959	3	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	188.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCTCTTTTTTTTTT	-11	True	NA	26	True	ATTAAA	-28	NA	38930943	38933168	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38930999_38931275_38931344_38932332
transcript_99617.known	chr19	+	929	3	FSM	ENSG00000128626.12	ENST00000402029.3	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	250.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTGGAGTATTTGC	44	False	NA	26	True	AATAAA	-26	NA	38930998	38933020	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38931172_38931275_38931344_38932332
transcript_99619.known	chr19	+	641	2	FSM	ENSG00000128626.12	ENST00000598734.1	641	2	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCTGGCCAGCCGTG	-11	True	NA	NA	False	ATTAAA	-5	NA	38930943	38931861	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38930999_38931275
transcript_99620.known	chr19	-	2218	6	FSM	ENSG00000269190.6	ENST00000292852.9	2218	6	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_2	9.21737489744233	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTGTATGTGTCTT	-23	True	NA	-2	True	NA	NA	NA	38975742	38941400	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38942752_38944968_38945105_38946471_38946568_38948566_38948679_38949970_38950337_38975585
transcript_99622.known	chr19	+	2903	13	FSM	ENSG00000183760.11	ENST00000331256.10	2903	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.37463447479583	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTGCCCTGTTGGAGT	1	True	NA	NA	False	AATAAA	-34	NA	39084367	39111493	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39084401_39085091_39085391_39098457_39098659_39098959_39099143_39100226_39100351_39100579_39100643_39100738_39100854_39100948_39101057_39101149_39101208_39101287_39101356_39101465_39101538_39106946_39107085_39110052
transcript_99640.known	chr19	+	3025	11	FSM	ENSG00000130669.17	ENST00000593690.5	3025	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	171.626920965215	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	22	False	NA	13	True	ATTAAA	-14	NA	39125813	39179401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39168229_39168313_39168624_39168841_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_9966.known	chr1	+	1179	5	FSM	ENSG00000116221.15	ENST00000336230.10	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	720.481566384595	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTTTGGTATGAG	-15	True	NA	24	True	AATAAA	-20	NA	54200166	54218381	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54200590_54209947_54210132_54212500_54212659_54216140_54216345_54218171
transcript_99661.nic	chr19	+	2924	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	-80	0	combination_of_known_junctions	TRUE	canonical	3	196	junction_2	84.3411649123098	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	NA	False	NA	14	True	ATTAAA	-15	NA	39125689	39179402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39125920_39168229_39168303_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_99670.known	chr19	+	2555	10	FSM	ENSG00000130669.17	ENST00000321944.8	2555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	157.126354753188	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	6	True	NA	13	True	ATTAAA	-14	NA	39125797	39179401	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39168229_39168313_39169531_39169758_39172917_39173107_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_99672.nic	chr19	+	2934	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	97.9977324000691	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	NA	False	NA	14	True	ATTAAA	-15	NA	39125689	39179402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39125920_39168229_39168313_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_99685.known	chr19	+	5735	9	FSM	ENSG00000130669.17	ENST00000599386.5	5735	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	157.303647446587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGACAAAA	42	False	NA	NA	False	NA	NA	NA	39125833	39182816	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39168229_39168303_39169531_39169758_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_9969.nic	chr1	+	3089	16	NIC	ENSG00000162390.18	novel	2875	15	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_12	4.14514441512262	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTGTTTCAGCTCTT	NA	False	NA	18	True	TATAAA	-18	NA	54542112	54610124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_54542438_54584654_54584863_54585834_54585905_54592545_54592607_54593940_54594040_54594555_54594692_54597258_54597416_54599295_54599416_54601268_54601414_54602668_54602725_54603870_54603938_54604345_54604430_54605075_54605210_54607133_54607266_54607941_54608069_54608956
transcript_997.known	chr1	-	1589	3	FSM	ENSG00000127054.22	ENST00000498173.2	1589	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	NA	False	NA	-16	True	AATGAA	-15	NA	1324687	1318680	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319525_1320455_1321094_1324580
transcript_9970.nic	chr1	+	3395	16	NIC	ENSG00000162390.18	novel	2875	15	NA	NA	-245	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_12	4.14514441512262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGACCGGCGGTACCTGC	NA	False	NA	5	True	AATAAA	-19	NA	54542011	54610329	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_54542438_54584654_54584863_54585834_54585905_54592545_54592607_54593940_54594040_54594555_54594692_54597258_54597416_54599295_54599416_54601268_54601414_54602668_54602725_54603870_54603938_54604345_54604430_54605075_54605210_54607133_54607266_54607941_54608069_54608956
transcript_99704.known	chr19	+	2739	9	FSM	ENSG00000130669.17	ENST00000358301.7	2739	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	109.093709717838	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	10	True	NA	14	True	ATTAAA	-15	NA	39125801	39179402	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_99718.known	chr19	+	1715	8	FSM	ENSG00000130669.17	ENST00000599470.5	1715	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	180.135549868788	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCCCTCCCCCATGTT	-10	True	NA	NA	False	NA	NA	NA	39125781	39178817	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39169531_39169758_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_99727.known	chr19	+	2855	9	FSM	ENSG00000130669.17	ENST00000360442.7	2855	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	143.83845104839	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCGATGTGTGGGG	NA	False	NA	18	True	ATTAAA	-19	NA	39168610	39179406	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39168841_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_99728.known	chr19	+	1975	6	FSM	ENSG00000188505.5	ENST00000339852.5	1975	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.49857113690718	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATCTGATCACTTGC	-1	True	NA	11	True	ATTAAA	-20	NA	39196963	39201884	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39197320_39198052_39198116_39198201_39198254_39199169_39199266_39200345_39200485_39200615
transcript_99730.known	chr19	-	3579	5	FSM	ENSG00000128011.5	ENST00000248668.5	3579	5	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	2.38484800354236	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTAGTGAATACTTACTT	-2	True	NA	-1	True	AATAAA	-18	NA	39320863	39306565	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39308543_39313930_39315374_39316081_39316137_39318325_39318359_39320792
transcript_99737.known	chr19	-	173	1	FSM	ENSG00000269246.1	ENST00000599274.1	173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGATCTGTGCG	8	True	NA	-1	True	AATAAA	-19	NA	39341945	39341772	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39341800_39341900
transcript_99743.nnic	chr19	+	4027	15	NNC	ENSG00000179134.16	novel	4519	16	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	277.419642713463	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	6210	False	NA	112	True	AAAACA	-23	NA	39342395	39384926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_39342577_39354005_39354067_39355054_39355151_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_99749.nnic	chr19	+	4008	15	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	274.407013729011	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	-15	True	NA	112	True	AAAACA	-23	NA	39342420	39384926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39342577_39348287_39348390_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_99756.nic	chr19	+	3931	14	FSM	ENSG00000179134.16	ENST00000610417.5	4680	14	-25	774	-25	0	multi-exon	FALSE	canonical	3	544	junction_2	119.963702597196	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	6210	False	NA	112	True	AAAACA	-23	NA	39342395	39384926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_99757.nic	chr19	+	3722	14	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_13	220.272397258673	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	6210	False	NA	112	True	AAAACA	-23	NA	39342395	39384926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383707
transcript_99767.nic	chr19	+	4138	13	ISM	ENSG00000179134.16	ENST00000610417.5	4680	14	-25	774	-25	0	intron_retention	FALSE	canonical	3	544	junction_2	105.987420637231	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	6210	False	NA	112	True	AAAACA	-23	NA	39342395	39384926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
transcript_99771.nic	chr19	+	3850	13	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	249	junction_1	178.420130746381	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	-20	True	NA	112	True	AAAACA	-23	NA	39342415	39384926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_99772.known	chr19	+	2877	13	FSM	ENSG00000179134.16	ENST00000598913.5	2877	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_12	260.305696356333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGATCATTTCCTCT	6	True	NA	15	True	NA	NA	NA	39342441	39384188	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383707
transcript_99778.nic	chr19	+	4057	12	ISM	ENSG00000179134.16	ENST00000598913.5	2877	13	-26	-738	-5	0	intron_retention	FALSE	canonical	3	249	junction_1	174.393162728966	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	-20	True	NA	112	True	AAAACA	-23	NA	39342415	39384926	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
transcript_99787.known	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	12.8099443619484	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-25	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
transcript_99791.known	chr19	+	3590	4	FSM	ENSG00000063322.15	ENST00000315588.11	3590	4	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	18.8030730348939	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTCTTGTTTATAT	-20	True	NA	93	True	ATTAAA	-15	NA	39391377	39400641	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397456
transcript_99795.known	chr19	+	2941	3	FSM	ENSG00000063322.15	ENST00000599417.2	2941	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAAGGCCTGTATTT	505	False	NA	-61	True	NA	NA	NA	39391302	39399976	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39391639_39393552_39393638_39397456
transcript_99798.known	chr19	+	1747	2	FSM	ENSG00000128016.7	ENST00000597629.3	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGATCCTGGCTTCTTC	1	True	NA	10	True	AATAAA	-15	NA	39406846	39409407	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39406929_39407742
transcript_99799.known	chr19	+	1699	2	FSM	ENSG00000128016.7	ENST00000652583.1	1699	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTGGGCATTTTTAA	12	False	NA	27	True	AATATA	-38	NA	39406857	39409368	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39406933_39407744
transcript_9980.known	chr1	+	2875	15	FSM	ENSG00000162390.18	ENST00000481208.5	2875	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.7056197405716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTGTTTCAGCTCTT	-16	True	NA	18	True	TATAAA	-18	NA	54542256	54610124	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54542438_54584654_54584863_54592545_54592607_54593940_54594040_54594555_54594692_54597258_54597416_54599295_54599416_54601268_54601414_54602668_54602725_54603870_54603938_54604345_54604430_54605075_54605210_54607133_54607266_54607941_54608069_54608956
transcript_99804.known	chr19	+	8048	19	FSM	ENSG00000090924.15	ENST00000425673.6	8048	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	22.6514791166678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGTTTATTGACTGGC	-11	True	NA	21	True	AATAAA	-24	NA	39412668	39428415	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39413413_39414064_39414196_39414991_39415261_39415338_39415440_39416347_39416415_39416550_39416598_39416849_39417001_39417554_39417693_39417904_39418106_39418733_39418827_39418916_39419004_39420625_39420660_39420750_39420853_39420948_39420997_39421074_39421114_39421282_39421300_39422114_39422289_39422731_39423654_39423732
transcript_99807.nic	chr19	+	4823	19	NIC	ENSG00000090924.15	novel	2205	18	NA	NA	-51	0	intron_retention	FALSE	canonical	3	16	junction_1	27.4532711851508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTATTTTCCCATTC	501	False	NA	19	True	NA	NA	NA	39413476	39425516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39413892_39414064_39414196_39414988_39415261_39415338_39415440_39416347_39416415_39416550_39416598_39416849_39417001_39417554_39417693_39417904_39418106_39418733_39418827_39418916_39419004_39420625_39420660_39420750_39420853_39420948_39420997_39421074_39421114_39421282_39421300_39422114_39422289_39422731_39423654_39423732
transcript_99828.nic	chr19	+	4978	18	ISM	ENSG00000090924.15	ENST00000425673.6	8048	19	823	2899	-36	0	3prime_fragment	FALSE	canonical	3	42	junction_1	18.6012612587218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTATTTTCCCATTC	516	False	NA	19	True	NA	NA	NA	39413491	39425516	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_39414196_39414991_39415261_39415338_39415440_39416347_39416415_39416550_39416598_39416849_39417001_39417554_39417693_39417904_39418106_39418733_39418827_39418916_39419004_39420625_39420660_39420750_39420853_39420948_39420997_39421074_39421114_39421282_39421300_39422114_39422289_39422731_39423654_39423732
transcript_99844.known	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_3	2774.82026444957	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	3	True	NA	-33	True	AATAAA	-22	NA	39435941	39433216	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
transcript_99845.known	chr19	-	2389	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	95.374117150421	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTTTCAAGAACTGT	-4	True	NA	-39	True	AATAAA	-16	NA	39435948	39433222	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
transcript_99846.known	chr19	-	631	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	0	0	0	multi-exon	TRUE	canonical	3	6641	junction_1	122.418340129247	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTCTGGATTTTGACC	-5	True	NA	-26	True	AGTAAA	-15	NA	39435949	39433136	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
transcript_99847.known	chr19	-	407	4	FSM	ENSG00000105193.9	ENST00000599705.1	407	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	3259.96526907198	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTCACTTGTATAATA	9782	False	NA	-76	True	NA	NA	NA	39435705	39433259	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433517_39433570_39433664_39433762_39435606
transcript_99848.known	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	140.330562126241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	8	True	NA	-23	True	AATAAA	-32	NA	39435936	39433206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
transcript_99849.known	chr19	-	555	5	FSM	ENSG00000105193.9	ENST00000599539.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2983.88164770321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	0	True	NA	-23	True	AATAAA	-32	NA	39435915	39433206	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433493_39433570_39433664_39433762_39435606_39435709_39435847
transcript_99863.known	chr19	+	3678	30	FSM	ENSG00000196235.14	ENST00000432763.7	3678	30	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	91.2081806832227	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-12	True	NA	21	True	AATAAA	-22	NA	39445581	39476670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_99871.nic	chr19	+	3617	30	NIC	ENSG00000196235.14	novel	3678	30	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	130.304436361748	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	4	True	NA	21	True	AATAAA	-22	NA	39445564	39476670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39445638_39445881_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_9988.known	chr1	+	2356	10	FSM	ENSG00000243725.7	ENST00000371281.4	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	26.1892448002969	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTAATTTGAGGCTGG	-4	True	NA	26	True	AGTAAA	-26	NA	54715860	54742657	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_99890.known	chr19	+	3698	29	FSM	ENSG00000196235.14	ENST00000402194.6	3698	29	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	132.974218768688	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGCGTGTGTGTGTGT	9355	False	NA	17	True	AATAAA	-18	NA	39445545	39476666	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_9991.nnic	chr1	+	1966	9	NIC	ENSG00000243725.7	novel	2356	10	NA	NA	-42	0	intron_retention	FALSE	canonical	3	27	junction_7	83.1977125586996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTAGCTGTGTGACTTC	-7	True	NA	14	True	NA	NA	NA	54715818	54742307	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54737581_54737665_54741410
transcript_9993.known	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-3	True	NA	-15	True	AATAAA	-16	NA	54764523	54756897	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54759191_54764460
transcript_9994.known	chr1	-	3401	7	FSM	ENSG00000006555.11	ENST00000371276.9	3401	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.42670329642684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCAGTGTTTATATGTT	-14	True	NA	NA	False	AATAAA	-16	NA	54801323	54779711	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54781780_54782324_54782478_54785982_54786145_54786956_54787076_54787710_54787827_54788041_54788098_54800596
transcript_9995.known	chr1	-	2149	6	FSM	ENSG00000006555.11	ENST00000371274.8	2149	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.72763633939717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAAGTTCATGGTCTGA	-1	True	NA	NA	False	AATAAA	-34	NA	54801198	54784550	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54785645_54785982_54786145_54786956_54787076_54787710_54787827_54788041_54788098_54800596
transcript_99950.known	chr19	+	3902	31	FSM	ENSG00000196235.14	ENST00000599117.5	3902	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	139.815910714371	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	5452	False	NA	21	True	AATAAA	-22	NA	39441642	39476670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39441726_39445440_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_99968.known	chr19	+	3770	28	FSM	ENSG00000196235.14	ENST00000359191.10	3770	28	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	129.132953253274	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-6	True	NA	21	True	AATAAA	-22	NA	39445643	39476670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_99969.known	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	82.6586909143465	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-3	True	NA	21	True	AATAAA	-22	NA	39445683	39476670	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_9998.known	chr1	-	2027	10	FSM	ENSG00000116133.13	ENST00000436604.2	2027	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	802.001954986688	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCGAGCTGTGCAACGT	-13	True	NA	NA	False	NA	NA	NA	54887195	54850875	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54851246_54852202_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_99991.known	chr19	+	5037	11	FSM	ENSG00000105197.11	ENST00000607714.6	5037	11	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_3	56.8971879797236	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-7	True	NA	16	True	AATAAA	-16	NA	39480837	39493779	H1_mix_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485543_39485603_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
